Muroidea_A	ANCESTRAL SPECIES	34												ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Murinae	ANCESTRAL SPECIES	43												ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Mus	ANCESTRAL SPECIES	19	ENSGT00940000160814	ENSGT00940000156781.d #7	ENSGT00950000182902.a.c #8	ENSGT00510000047245 #9	ENSGT00940000157762 #10	ENSGT00390000008041.B #11	ENSGT01030000234517.A #12	ENSGT00390000009615 #13	ENSGT00390000016232 #14	ENSGT00950000183074.A #16	ENSGT00940000157209.jb #17	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Mus_A	ANCESTRAL SPECIES	19	ENSGT00940000160814	ENSGT00940000156781.d #7	ENSGT00950000182902.a.c #8	ENSGT00510000047245 #9	ENSGT00940000157762 #10	ENSGT00390000008041.B #11	ENSGT01030000234517.A #12	ENSGT00390000009615 #13	ENSGT00390000016232 #14	ENSGT00950000183074.A #16	ENSGT00940000157209.jb #17	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Ryukyu mouse	MODERN SPECIES	9	Mib1 (MGP_CAROLIEiJ_G0021996) #7	Abhd3 (MGP_CAROLIEiJ_G0021995) #8	Snrpd1 (MGP_CAROLIEiJ_G0021994) #9	Esco1 (MGP_CAROLIEiJ_G0021993) #10	Greb1l (MGP_CAROLIEiJ_G0021992) #11	Rock1 (MGP_CAROLIEiJ_G0021991) #12	Usp14 (MGP_CAROLIEiJ_G0021990) #13	Thoc1 (MGP_CAROLIEiJ_G0021989) #14	MGP_CAROLIEiJ_G0021988 #15	Colec12 (MGP_CAROLIEiJ_G0021987) #16	Cetn1 (MGP_CAROLIEiJ_G0021986) #17	Ccny (MGP_CAROLIEiJ_G0021985) #18	Gjd4 (MGP_CAROLIEiJ_G0021984) #19	Fzd8 (MGP_CAROLIEiJ_G0021983) #20	Wac (MGP_CAROLIEiJ_G0021982) #21	Mpp7 (MGP_CAROLIEiJ_G0021981) #22	Odad2 (MGP_CAROLIEiJ_G0021980) #23	Mkx (MGP_CAROLIEiJ_G0021979) #24	Rab18 (MGP_CAROLIEiJ_G0021978) #25	4921524L21Rik (MGP_CAROLIEiJ_G0021977) #26	Epc1 (MGP_CAROLIEiJ_G0021976) #27	Kif5b (MGP_CAROLIEiJ_G0021975) #28	Arhgap12 (MGP_CAROLIEiJ_G0021974) #29	Zeb1 (MGP_CAROLIEiJ_G0021973) #30	Zfp438 (MGP_CAROLIEiJ_G0021972) #31	Svil (MGP_CAROLIEiJ_G0021971) #32	Jcad (MGP_CAROLIEiJ_G0021970) #33	Mtpap (MGP_CAROLIEiJ_G0021969) #34	Map3k8 (MGP_CAROLIEiJ_G0021968) #35	Lyzl1 (MGP_CAROLIEiJ_G0021967) #36	Bambi (MGP_CAROLIEiJ_G0021966) #37
Mus_B	ANCESTRAL SPECIES	19	ENSGT00940000160814	ENSGT00940000156781.d #7	ENSGT00950000182902.a.c #8	ENSGT00510000047245 #9	ENSGT00940000157762 #10	ENSGT00390000008041.B #11	ENSGT01030000234517.A #12	ENSGT00390000009615 #13	ENSGT00390000016232 #14	ENSGT00950000183074.A #16	ENSGT00940000157209.jb #17	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Mus_C	ANCESTRAL SPECIES	16	ENSGT00940000160814	ENSGT00940000156781.d #7	ENSGT00950000182902.a.c #8	ENSGT00510000047245 #9	ENSGT00940000157762 #10	ENSGT00390000008041.B #11	ENSGT01030000234517.A #12	ENSGT00390000009615 #13	ENSGT00390000016232 #14	ENSGT00950000183074.A #16	ENSGT00940000157209.jb #17	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Steppe mouse	MODERN SPECIES	2390																Mpp7 (ENSMSIG00000001408) #22
spretus	MODERN SPECIES	9	Gata6 (MGP_SPRETEiJ_G0022912)	Abhd3 (MGP_SPRETEiJ_G0022911) #8	Snrpd1 (MGP_SPRETEiJ_G0022910) #9	Esco1 (MGP_SPRETEiJ_G0022909) #10	Greb1l (MGP_SPRETEiJ_G0022908) #11	Rock1 (MGP_SPRETEiJ_G0022907) #12	Usp14 (MGP_SPRETEiJ_G0022906) #13	Thoc1 (MGP_SPRETEiJ_G0022905) #14	MGP_SPRETEiJ_G0022904	Colec12 (MGP_SPRETEiJ_G0022903) #16	Cetn1 (MGP_SPRETEiJ_G0022902) #17	Ccny (MGP_SPRETEiJ_G0022901) #18	Gjd4 (MGP_SPRETEiJ_G0022900) #19	Fzd8 (MGP_SPRETEiJ_G0022899) #20	Wac (MGP_SPRETEiJ_G0022898) #21	Mpp7 (MGP_SPRETEiJ_G0022897) #22	Odad2 (MGP_SPRETEiJ_G0022896) #23	Mkx (MGP_SPRETEiJ_G0022895) #24	Rab18 (MGP_SPRETEiJ_G0022894) #25	4921524L21Rik (MGP_SPRETEiJ_G0022893) #26	Epc1 (MGP_SPRETEiJ_G0022892) #27	Kif5b (MGP_SPRETEiJ_G0022891) #28	Arhgap12 (MGP_SPRETEiJ_G0022890) #29	Zeb1 (MGP_SPRETEiJ_G0022889) #30	Zfp438 (MGP_SPRETEiJ_G0022888) #31	Svil (MGP_SPRETEiJ_G0022887) #32	Jcad (MGP_SPRETEiJ_G0022886) #33	Mtpap (MGP_SPRETEiJ_G0022885) #34	Map3k8 (MGP_SPRETEiJ_G0022884) #35	Lyzl1 (MGP_SPRETEiJ_G0022883) #36	Bambi (MGP_SPRETEiJ_G0022882) #37
Mouse	MODERN SPECIES	9	Gata6 (ENSMUSG00000005836)	Mib1 (ENSMUSG00000024294) #7	Abhd3 (ENSMUSG00000002475) #8	Snrpd1 (ENSMUSG00000002477) #9	Esco1 (ENSMUSG00000024293) #10	Greb1l (ENSMUSG00000042942) #11	Rock1 (ENSMUSG00000024290) #12	Usp14 (ENSMUSG00000047879) #13	Thoc1 (ENSMUSG00000024287) #14	Colec12 (ENSMUSG00000036103) #16	Cetn1 (ENSMUSG00000050996) #17	Ccny (ENSMUSG00000024286) #18	Gjd4 (ENSMUSG00000036855) #19	Fzd8 (ENSMUSG00000036904) #20	Wac (ENSMUSG00000024283) #21	Mpp7 (ENSMUSG00000057440) #22	Odad2 (ENSMUSG00000061802) #23	Mkx (ENSMUSG00000061013) #24	Rab18 (ENSMUSG00000073639) #25	4921524L21Rik (ENSMUSG00000039540) #26	Epc1 (ENSMUSG00000024240) #27	Kif5b (ENSMUSG00000006740) #28	Arhgap12 (ENSMUSG00000041225) #29	Zeb1 (ENSMUSG00000024238) #30	Zfp438 (ENSMUSG00000050945) #31	Svil (ENSMUSG00000024236) #32	Jcad (ENSMUSG00000033960) #33	Mtpap (ENSMUSG00000024234) #34	Map3k8 (ENSMUSG00000024235) #35	Lyzl1 (ENSMUSG00000024233) #36	Bambi (ENSMUSG00000024232) #37
Shrew mouse	MODERN SPECIES	6	MGP_PahariEiJ_G0018734	MGP_PahariEiJ_G0018733 #7	Abhd3 (MGP_PahariEiJ_G0018732) #8	Snrpd1 (MGP_PahariEiJ_G0018731) #9	Esco1 (MGP_PahariEiJ_G0018730) #10	Greb1l (MGP_PahariEiJ_G0018729) #11	Rock1 (MGP_PahariEiJ_G0018728) #12	Usp14 (MGP_PahariEiJ_G0018727) #13	Thoc1 (MGP_PahariEiJ_G0018726) #14	Colec12 (MGP_PahariEiJ_G0018725) #16	Cetn1 (MGP_PahariEiJ_G0018724) #17	Ccny (MGP_PahariEiJ_G0018723) #18	Gjd4 (MGP_PahariEiJ_G0018722) #19	Fzd8 (MGP_PahariEiJ_G0018721) #20	Wac (MGP_PahariEiJ_G0018720) #21	Mpp7 (MGP_PahariEiJ_G0018719) #22	Odad2 (MGP_PahariEiJ_G0018718) #23	Mkx (MGP_PahariEiJ_G0018717) #24	Rab18 (MGP_PahariEiJ_G0018716) #25	4921524L21Rik (MGP_PahariEiJ_G0018715) #26	Epc1 (MGP_PahariEiJ_G0018714) #27	Kif5b (MGP_PahariEiJ_G0018713) #28	MGP_PahariEiJ_G0018712 #29	Zeb1 (MGP_PahariEiJ_G0018711) #30	Zfp438 (MGP_PahariEiJ_G0018710) #31	Svil (MGP_PahariEiJ_G0018709) #32	Jcad (MGP_PahariEiJ_G0018708) #33	Mtpap (MGP_PahariEiJ_G0018707) #34	Map3k8 (MGP_PahariEiJ_G0018706) #35	Lyzl1 (MGP_PahariEiJ_G0018705) #36	Bambi (MGP_PahariEiJ_G0018704) #37
Rat	MODERN SPECIES	8	Lgals8 (ENSRNOG00000018046)	Anlnl1 (ENSRNOG00000018113)	Poted (ENSRNOG00000038520)	LOC103690071 (ENSRNOG00000056515)	AABR07028262.1 (ENSRNOG00000057362)	Ccny (ENSRNOG00000018123) #18	ENSRNOG00000063889	Gjd4 (ENSRNOG00000018407) #19	Fzd8 (ENSRNOG00000069521) #20	ENSRNOG00000062407	ENSRNOG00000065875	AABR07028237.1 (ENSRNOG00000018685)	LOC688682 (ENSRNOG00000067437)	ENSRNOG00000066586	Wac (ENSRNOG00000018698) #21	Mpp7 (ENSRNOG00000018760) #22	Odad2 (ENSRNOG00000018905) #23	Mkx (ENSRNOG00000018938) #24	Rab18 (ENSRNOG00000018972) #25	RGD1560860 (ENSRNOG00000050332) #26	LOC686142 (ENSRNOG00000063174)	LOC102553208 (ENSRNOG00000068518)	LOC120097781 (ENSRNOG00000063512)	Fam95c (ENSRNOG00000026376) #26	RGD1564129 (ENSRNOG00000042120)	Epc1 (ENSRNOG00000014834) #27	Crem (ENSRNOG00000014900)	ENSRNOG00000064489	Cul2 (ENSRNOG00000015292)	RGD1564129 (ENSRNOG00000063038)	Bambi (ENSRNOG00000016066) #37
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00950000183214.a.b.a.a	ENSGT00940000157169	ENSGT01090000259987.a.b	ENSGT00860000135880	ENSGT00390000009751	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Cricetinae	ANCESTRAL SPECIES	26	ENSGT00940000155293.a.a	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.b	ENSGT00390000011249	ENSGT00950000183214.a.b.a.a	ENSGT00940000157169	ENSGT01090000259987.a.b	ENSGT00390000009751	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Chinese hamster chok1gshd	MODERN SPECIES	317											Ccny (ENSCGRG00001001016) #18	Gjd4 (ENSCGRG00001013718) #19	Fzd8 (ENSCGRG00001009802) #20	ENSCGRG00001010846	Wac (ENSCGRG00001011994) #21	Mpp7 (ENSCGRG00001011478) #22	Odad2 (ENSCGRG00001018139) #23	Mkx (ENSCGRG00001009558) #24	Rab18 (ENSCGRG00001017519) #25	4921524L21Rik (ENSCGRG00001019523) #26	ENSCGRG00001000414	Epc1 (ENSCGRG00001013506) #27	Kif5b (ENSCGRG00001021999) #28	Arhgap12 (ENSCGRG00001023720) #29	Zeb1 (ENSCGRG00001016946) #30	Zfp438 (ENSCGRG00001006731) #31	Svil (ENSCGRG00001010819) #32	ENSCGRG00001005314	Jcad (ENSCGRG00001007782) #33	ENSCGRG00001017262 #34	Map3k8 (ENSCGRG00001019251) #35
Golden Hamster	MODERN SPECIES	765						ENSMAUG00000012443	Pard3 (ENSMAUG00000011428)	ENSMAUG00000015180	Nrp1 (ENSMAUG00000006089)	ENSMAUG00000000961	ENSMAUG00000008544	Ccny (ENSMAUG00000002471) #18	Gjd4 (ENSMAUG00000001462) #19	Fzd8 (ENSMAUG00000014871) #20	Wac (ENSMAUG00000016533) #21	Mpp7 (ENSMAUG00000014896) #22	ENSMAUG00000012264	Rab18 (ENSMAUG00000011110) #25
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000008727.a.a	ENSGT00390000004094	ENSGT00390000003939	ENSGT00940000160591.b	ENSGT00390000011698.c.a.c.a	ENSGT00390000011249	ENSGT00950000183214.a.b.a.a	ENSGT00940000157169	ENSGT01090000259987.a.b	ENSGT00860000135880	ENSGT00390000009751	ENSGT00940000154453.a.b.b #18	ENSGT01090000260098.B #19	ENSGT00940000161191.A #20	ENSGT00440000037780.a #21	ENSGT00940000156232.b #22	ENSGT00940000156625 #23	ENSGT00940000156227.f #24	ENSGT00940000157325.x #25	ENSGT00520000059545 #26	ENSGT00940000155003.e.a #27	ENSGT00940000154801 #28	ENSGT00950000182860.a.a.b #29	ENSGT00950000183208.B #30	ENSGT00390000014526 #31	ENSGT00940000154653 #32	ENSGT00390000015348 #33	ENSGT00940000158582 #34	ENSGT00940000158806 #35	ENSGT00940000159227 #36	ENSGT00940000154101.b #37
Northern American deer mouse	MODERN SPECIES	18	Tomm20 (ENSPEMG00000011555)	Rbm34 (ENSPEMG00000000265)	ENSPEMG00000024328	Pard3 (ENSPEMG00000007876)	Nrp1 (ENSPEMG00000017771)	Itgb1 (ENSPEMG00000011120)	ENSPEMG00000014994	ENSPEMG00000029993	Ccny (ENSPEMG00000011106) #18	Gjd4 (ENSPEMG00000019387) #19	Fzd8 (ENSPEMG00000019393) #20	ENSPEMG00000028982	ENSPEMG00000025246	ENSPEMG00000025783 #21	ENSPEMG00000025891	Mpp7 (ENSPEMG00000019604) #22	Odad2 (ENSPEMG00000019997) #23	Mkx (ENSPEMG00000026515) #24	Rab18 (ENSPEMG00000026190) #25	4921524L21Rik (ENSPEMG00000019630) #26	Epc1 (ENSPEMG00000019284) #27	ENSPEMG00000012903	Kif5b (ENSPEMG00000019291) #28	Arhgap12 (ENSPEMG00000019343) #29	Zeb1 (ENSPEMG00000019404) #30	Zfp438 (ENSPEMG00000019458) #31	Svil (ENSPEMG00000019892) #32	Jcad (ENSPEMG00000019810) #33	Mtpap (ENSPEMG00000019906) #34	Map3k8 (ENSPEMG00000020056) #35	Lyzl1 (ENSPEMG00000019546) #36
Prairie vole	MODERN SPECIES	3	Mcm10 (ENSMOCG00000022180)	Ucma (ENSMOCG00000005346)	Phyh (ENSMOCG00000001877)	Sephs1 (ENSMOCG00000022876)	ENSMOCG00000022807	Prpf18 (ENSMOCG00000021468)	Frmd4a (ENSMOCG00000018621)	ENSMOCG00000018519	Cdnf (ENSMOCG00000016251)	Gm45902 (ENSMOCG00000002410)	Hspa14 (ENSMOCG00000020460)	Suv39h2 (ENSMOCG00000011550)	Dclre1c (ENSMOCG00000006406)	Meig1 (ENSMOCG00000009538)	ENSMOCG00000013927 #21	Mpp7 (ENSMOCG00000009850) #22	ENSMOCG00000019180	Odad2 (ENSMOCG00000011155) #23	Mkx (ENSMOCG00000015948) #24	Rab18 (ENSMOCG00000013044) #25	ENSMOCG00000022076	ENSMOCG00000012449 #27	Epc1 (ENSMOCG00000000443) #27	ENSMOCG00000005535	Kif5b (ENSMOCG00000019118) #28	ENSMOCG00000018138	Arhgap12 (ENSMOCG00000009460) #29	Zeb1 (ENSMOCG00000013432) #30	Zfp438 (ENSMOCG00000014707) #31	Svil (ENSMOCG00000012898) #32	Jcad (ENSMOCG00000015379) #33