Mus_B	ANCESTRAL SPECIES	17	ENSGT00940000157547	ENSGT00940000161933.hb.a #10	ENSGT00520000055955 #8	ENSGT00830000128402 #11	ENSGT00940000162712 #12	ENSGT00390000017666 #13	ENSGT00940000161472 #14	ENSGT00940000158243 #15	ENSGT00940000157417 #16	ENSGT00940000155944 #17	ENSGT00940000156726.f	ENSGT00940000157159 #18	ENSGT00940000159153 #19	ENSGT00390000009546 #20	ENSGT00390000016097 #21	ENSGT00730000111019 #22	ENSGT00940000158751 #23	ENSGT00940000156891 #24	ENSGT00940000156005 #25	ENSGT00390000013207 #27	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #28	ENSGT00390000000083.a #26	ENSGT00900000143211	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #29	ENSGT01010000222336.a.a.a.ob.a.b #30	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #32	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #33	ENSGT01010000222336.a.a.a.ob.b #34	ENSGT00390000016904 #35	ENSGT01030000234522.C.b.e.b.a.a.a #36
Mouse	MODERN SPECIES	3	Gm20498 (ENSMUSG00000021139) #7	Cox16 (ENSMUSG00000091803) #8	Gm4787 (ENSMUSG00000072974) #9	Adam4 (ENSMUSG00000072972) #10	Synj2bp (ENSMUSG00000090935) #11	Adam21 (ENSMUSG00000008438) #12	Med6 (ENSMUSG00000002679) #13	Ttc9 (ENSMUSG00000042734) #14	Map3k9 (ENSMUSG00000042724) #15	Pcnx (ENSMUSG00000021140) #16	Sipa1l1 (ENSMUSG00000042700) #17	Rgs6 (ENSMUSG00000021219) #18	Dpf3 (ENSMUSG00000021221) #19	Dcaf4 (ENSMUSG00000021222) #20	Zfyve1 (ENSMUSG00000042628) #21	Rbm25 (ENSMUSG00000010608) #22	Psen1 (ENSMUSG00000019969) #23	Papln (ENSMUSG00000021223) #24	Numb (ENSMUSG00000021224) #25	Riox1 (ENSMUSG00000046791) #26	Heatr4 (ENSMUSG00000090843) #27	Acot2 (ENSMUSG00000021226) #28	Acot1 (ENSMUSG00000072949) #29	Acot4 (ENSMUSG00000052392) #30	Gm49366 (ENSMUSG00000113475) #31	Acot3 (ENSMUSG00000021228) #32	Acot5 (ENSMUSG00000042540) #33	Acot6 (ENSMUSG00000043487) #34	Dnal1 (ENSMUSG00000042523) #35	Pnma1 (ENSMUSG00000054383) #36	Mideas (ENSMUSG00000042507) #37
Mus_C	ANCESTRAL SPECIES	11	ENSGT00390000018436.a.a	ENSGT00940000157547	ENSGT00520000055955 #8	ENSGT00830000128402 #11	ENSGT00940000162712 #12	ENSGT00390000017666 #13	ENSGT00940000161472 #14	ENSGT00940000158243 #15	ENSGT00940000157417 #16	ENSGT00940000155944 #17	ENSGT00940000156726.f	ENSGT00940000157159 #18	ENSGT00940000159153 #19	ENSGT00390000009546 #20	ENSGT00390000016097 #21	ENSGT00730000111019 #22	ENSGT00940000158751 #23	ENSGT00940000156891 #24	ENSGT00940000156005 #25	ENSGT00390000013207 #27	ENSGT01010000222336.a.a.a.ob.a.a.c.b.d #28	ENSGT00390000000083.a #26	ENSGT00900000143211	ENSGT01010000222336.a.a.a.ob.a.a.c.b.c #29	ENSGT01050000245403.b	ENSGT01010000222336.a.a.a.ob.a.a.c.a.b #32	ENSGT01050000245403.a	ENSGT01010000222336.a.a.a.ob.a.a.c.a.a #33	ENSGT01010000222336.a.a.a.ob.b #34	ENSGT00390000016904 #35	ENSGT01030000234522.C.b.e.b.a.a.a #36
Steppe mouse	MODERN SPECIES	3303		ENSMSIG00000026023 #11	Adam21 (ENSMSIG00000026079) #12	Med6 (ENSMSIG00000026084) #13	Ttc9 (ENSMSIG00000026125) #14	Map3k9 (ENSMSIG00000026137) #15	Pcnx (ENSMSIG00000026173) #16	Sipa1l1 (ENSMSIG00000000195) #17	ENSMSIG00000000341	ENSMSIG00000000376	Rgs6 (ENSMSIG00000000514) #18	Dpf3 (ENSMSIG00000001852) #19	Dcaf4 (ENSMSIG00000001923) #20	Zfyve1 (ENSMSIG00000001995) #21	ENSMSIG00000002025	Rbm25 (ENSMSIG00000002048) #22	Psen1 (ENSMSIG00000002158) #23	Papln (ENSMSIG00000002234) #24	ENSMSIG00000002517 #25	Heatr4 (ENSMSIG00000002642) #27	Riox1 (ENSMSIG00000002696) #26	Acot1 (ENSMSIG00000002711) #29	Acot3 (ENSMSIG00000002760) #32	ENSMSIG00000002815	ENSMSIG00000002825	Acot5 (ENSMSIG00000002856) #33	Acot6 (ENSMSIG00000002911) #34	Dnal1 (ENSMSIG00000002943) #35	Pnma1 (ENSMSIG00000003016) #36	Mideas (ENSMSIG00000003037) #37	Ptgr2 (ENSMSIG00000003090)
spretus	MODERN SPECIES	3	Slc8a3 (MGP_SPRETEiJ_G0018751)	MGP_SPRETEiJ_G0018752 #11	Cox16 (MGP_SPRETEiJ_G0018753) #8	MGP_SPRETEiJ_G0018754 #11	Adam21 (MGP_SPRETEiJ_G0018755) #12	Med6 (MGP_SPRETEiJ_G0018756) #13	Ttc9 (MGP_SPRETEiJ_G0018757) #14	Map3k9 (MGP_SPRETEiJ_G0018758) #15	Pcnx (MGP_SPRETEiJ_G0018759) #16	Sipa1l1 (MGP_SPRETEiJ_G0018760) #17	MGP_SPRETEiJ_G0018761	Rgs6 (MGP_SPRETEiJ_G0018762) #18	Dpf3 (MGP_SPRETEiJ_G0018763) #19	Dcaf4 (MGP_SPRETEiJ_G0018764) #20	Zfyve1 (MGP_SPRETEiJ_G0018765) #21	MGP_SPRETEiJ_G0018766 #22	Psen1 (MGP_SPRETEiJ_G0018767) #23	Papln (MGP_SPRETEiJ_G0018768) #24	Numb (MGP_SPRETEiJ_G0018769) #25	Riox1 (MGP_SPRETEiJ_G0018770) #26	MGP_SPRETEiJ_G0018771	Heatr4 (MGP_SPRETEiJ_G0018772) #27	MGP_SPRETEiJ_G0018773 #28	MGP_SPRETEiJ_G0018774 #29	MGP_SPRETEiJ_G0018775 ##34	Acot3 (MGP_SPRETEiJ_G0018776) #32	Acot5 (MGP_SPRETEiJ_G0018777) #33	MGP_SPRETEiJ_G0018778 ##34	Dnal1 (MGP_SPRETEiJ_G0018779) #35	Pnma1 (MGP_SPRETEiJ_G0018780) #36	Mideas (MGP_SPRETEiJ_G0018781) #37