Rodentia	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Rodentia_A	ANCESTRAL SPECIES	1	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Hystricomorpha	ANCESTRAL SPECIES	16	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991.p.a	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a.b #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Hystricomorpha_a	ANCESTRAL SPECIES	12	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991.o	ENSGT00940000155035.e.b	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a.b #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Hystricomorpha_b	ANCESTRAL SPECIES	10	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991.o	ENSGT00940000155035.e.b	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a.b #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Degu	MODERN SPECIES	59	ENSODEG00000020406 #7	ENSODEG00000020370 #8	LRRC4C (ENSODEG00000020475) #9	ENSODEG00000020466 #10	IFTAP (ENSODEG00000016540) #11	RAG2 (ENSODEG00000020447) #12	RAG1 (ENSODEG00000020338) #13	TRAF6 (ENSODEG00000017071) #14	PRR5L (ENSODEG00000016913) #15	COMMD9 (ENSODEG00000017403) #16	LDLRAD3 (ENSODEG00000017384) #17	ENSODEG00000016381 #18	FJX1 (ENSODEG00000016768) #19	ENSODEG00000016254 #20	PAMR1 (ENSODEG00000016795) #21	SLC1A2 (ENSODEG00000016926) #22	ENSODEG00000016446 #23	PDHX (ENSODEG00000016591) #24	ENSODEG00000016598 #25	ENSODEG00000016570 #26	EHF (ENSODEG00000017375) #27	ELF5 (ENSODEG00000016572) #28	CAT (ENSODEG00000016770) #29	ENSODEG00000016618 #30	ABTB2 (ENSODEG00000016924) #31	NAT10 (ENSODEG00000017069) #32	CAPRIN1 (ENSODEG00000016723) #33	ENSODEG00000020372 #34	LMO2 (ENSODEG00000016866) #35	FBXO3 (ENSODEG00000016802) #36	ENSODEG00000016777 #37
Long-tailed chinchilla	MODERN SPECIES	129	API5 (ENSCLAG00000013707)	ENSCLAG00000015133	LRRC4C (ENSCLAG00000015479) #9	ENSCLAG00000013706	ENSCLAG00000017889	IFTAP (ENSCLAG00000016504) #11	RAG2 (ENSCLAG00000016493) #12	RAG1 (ENSCLAG00000015510) #13	TRAF6 (ENSCLAG00000015588) #14	PRR5L (ENSCLAG00000015373) #15	COMMD9 (ENSCLAG00000014761) #16	LDLRAD3 (ENSCLAG00000013692) #17	TRIM44 (ENSCLAG00000014212) #18	FJX1 (ENSCLAG00000014978) #19	PAMR1 (ENSCLAG00000014744) #21	SLC1A2 (ENSCLAG00000014237) #22	ENSCLAG00000015376 #23	PDHX (ENSCLAG00000014466) #24	APIP (ENSCLAG00000014703) #26	EHF (ENSCLAG00000017235) #27	ELF5 (ENSCLAG00000013934) #28	CAT (ENSCLAG00000013690) #29	ABTB2 (ENSCLAG00000014834) #31	NAT10 (ENSCLAG00000016692) #32	ENSCLAG00000015468 #33	LMO2 (ENSCLAG00000015594) #35	FBXO3 (ENSCLAG00000015193) #36	ENSCLAG00000014692	C11orf91 (ENSCLAG00000015126)	KIAA1549L (ENSCLAG00000014544)	HIPK3 (ENSCLAG00000015597)
Guinea pig	MODERN SPECIES	92					ENSCPOG00000020978	IFTAP (ENSCPOG00000012798) #11	RAG2 (ENSCPOG00000020441) #12	RAG1 (ENSCPOG00000004516) #13	TRAF6 (ENSCPOG00000004507) #14	PRR5L (ENSCPOG00000030786) #15	COMMD9 (ENSCPOG00000010648) #16	LDLRAD3 (ENSCPOG00000035009) #17	TRIM44 (ENSCPOG00000011263) #18	FJX1 (ENSCPOG00000022249) #19	PAMR1 (ENSCPOG00000007812) #21	SLC1A2 (ENSCPOG00000007801) #22	CD44 (ENSCPOG00000007792) #23	PDHX (ENSCPOG00000003099) #24	APIP (ENSCPOG00000003097) #26	EHF (ENSCPOG00000012596) #27	ELF5 (ENSCPOG00000012593) #28	CAT (ENSCPOG00000012582) #29	ABTB2 (ENSCPOG00000020779) #31	NAT10 (ENSCPOG00000015736) #32	CAPRIN1 (ENSCPOG00000015734) #33	LMO2 (ENSCPOG00000026645) #35	FBXO3 (ENSCPOG00000013568) #36	C11orf91 (ENSCPOG00000023939)	KIAA1549L (ENSCPOG00000005350)	HIPK3 (ENSCPOG00000002078)	CSTF3 (ENSCPOG00000005545)
Naked mole-rat female	MODERN SPECIES	14	LRRC4C (ENSHGLG00000042650) #9	ENSHGLG00000041917	ENSHGLG00000044878	IFTAP (ENSHGLG00000007037) #11	RAG2 (ENSHGLG00000020564) #12	RAG1 (ENSHGLG00000020565) #13	TRAF6 (ENSHGLG00000010513) #14	PRR5L (ENSHGLG00000006197) #15	COMMD9 (ENSHGLG00000039189) #16	LDLRAD3 (ENSHGLG00000009909) #17	ENSHGLG00000035280	TRIM44 (ENSHGLG00000006623) #18	FJX1 (ENSHGLG00000038500) #19	ENSHGLG00000038577	PAMR1 (ENSHGLG00000007733) #21	SLC1A2 (ENSHGLG00000010072) #22	CD44 (ENSHGLG00000011767) #23	ENSHGLG00000047526	ENSHGLG00000040571	ENSHGLG00000010978 #24	APIP (ENSHGLG00000011839) #26	EHF (ENSHGLG00000009758) #27	ELF5 (ENSHGLG00000011019) #28	CAT (ENSHGLG00000011741) #29	ENSHGLG00000016446 #31	NAT10 (ENSHGLG00000016891) #32	ENSHGLG00000018658 #33	ENSHGLG00000009842	ENSHGLG00000006506	ENSHGLG00000035097	ENSHGLG00000048933 #35
Sciuridae	ANCESTRAL SPECIES	2	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605.f.a #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Marmotini	ANCESTRAL SPECIES	22	ENSGT00390000016821	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605.f.a #18	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140.g #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Marmotini_b	ANCESTRAL SPECIES	23	ENSGT00390000016821	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605.f.a #18	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140.g #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Arctic ground squirrel	MODERN SPECIES	10	ALKBH3 (ENSUPAG00010001256)	HSD17B12 (ENSUPAG00010001237)	ENSUPAG00010001201	API5 (ENSUPAG00010001168)	ENSUPAG00010001157	LRRC4C (ENSUPAG00010001136) #9	IFTAP (ENSUPAG00010001086) #11	RAG2 (ENSUPAG00010001080) #12	RAG1 (ENSUPAG00010001077) #13	TRAF6 (ENSUPAG00010001061) #14	PRR5L (ENSUPAG00010001016) #15	COMMD9 (ENSUPAG00010001008) #16	LDLRAD3 (ENSUPAG00010000987) #17	ENSUPAG00010000969 #18	PAMR1 (ENSUPAG00010000955) #21	SLC1A2 (ENSUPAG00010000901) #22	CD44 (ENSUPAG00010000106) #23	PDHX (ENSUPAG00010000084) #24	APIP (ENSUPAG00010000057) #26	EHF (ENSUPAG00010019516) #27	ELF5 (ENSUPAG00010019491) #28	CAT (ENSUPAG00010019472) #29	ABTB2 (ENSUPAG00010019465) #31	NAT10 (ENSUPAG00010019438) #32	CAPRIN1 (ENSUPAG00010019403) #33	LMO2 (ENSUPAG00010019388) #35	FBXO3 (ENSUPAG00010019358) #36	ENSUPAG00010019350	C11orf91 (ENSUPAG00010019347)	KIAA1549L (ENSUPAG00010019291)	HIPK3 (ENSUPAG00010019217)
Squirrel	MODERN SPECIES	133							IFTAP (ENSSTOG00000029068) #11	RAG2 (ENSSTOG00000012558) #12	RAG1 (ENSSTOG00000025584) #13	TRAF6 (ENSSTOG00000007303) #14	PRR5L (ENSSTOG00000022180) #15	COMMD9 (ENSSTOG00000007267) #16	LDLRAD3 (ENSSTOG00000007228) #17	TRIM44 (ENSSTOG00000023760) #18	PAMR1 (ENSSTOG00000000826) #21	SLC1A2 (ENSSTOG00000000822) #22	ENSSTOG00000000813 #23	PDHX (ENSSTOG00000004403) #24	APIP (ENSSTOG00000004390) #26	ENSSTOG00000008622 #27	ELF5 (ENSSTOG00000008610) #28	CAT (ENSSTOG00000008595) #29	ABTB2 (ENSSTOG00000001839) #31	ENSSTOG00000001817 #32	CAPRIN1 (ENSSTOG00000006945) #33	LMO2 (ENSSTOG00000024319) #35	FBXO3 (ENSSTOG00000016405) #36	ENSSTOG00000011395	C11orf91 (ENSSTOG00000026942)	KIAA1549L (ENSSTOG00000011381)	HIPK3 (ENSSTOG00000009714)
Alpin marmot	MODERN SPECIES	3	ALKBH3 (ENSMMMG00000011630)	ENSMMMG00000011626	HSD17B12 (ENSMMMG00000011610)	TTC17 (ENSMMMG00000011550)	API5 (ENSMMMG00000011483)	LRRC4C (ENSMMMG00000011362) #9	IFTAP (ENSMMMG00000011311) #11	RAG2 (ENSMMMG00000011304) #12	RAG1 (ENSMMMG00000011298) #13	TRAF6 (ENSMMMG00000011285) #14	PRR5L (ENSMMMG00000011238) #15	COMMD9 (ENSMMMG00000011235) #16	LDLRAD3 (ENSMMMG00000011216) #17	TRIM44 (ENSMMMG00000011195) #18	PAMR1 (ENSMMMG00000011162) #21	SLC1A2 (ENSMMMG00000011014) #22	CD44 (ENSMMMG00000010323) #23	PDHX (ENSMMMG00000010279) #24	APIP (ENSMMMG00000010262) #26	EHF (ENSMMMG00000010179) #27	ELF5 (ENSMMMG00000010124) #28	CAT (ENSMMMG00000010087) #29	ABTB2 (ENSMMMG00000010060) #31	NAT10 (ENSMMMG00000009992) #32	CAPRIN1 (ENSMMMG00000008164) #33	LMO2 (ENSMMMG00000008095) #35	FBXO3 (ENSMMMG00000008035) #36	ENSMMMG00000008026	C11orf91 (ENSMMMG00000008017)	KIAA1549L (ENSMMMG00000007942)	HIPK3 (ENSMMMG00000007810)
Eurasian red squirrel	MODERN SPECIES	2	TTC17 (ENSSVLG00005018176)	ENSSVLG00005018298	LRRC4C (ENSSVLG00005018979) #9	ENSSVLG00005019010	ENSSVLG00005019047 #11	RAG2 (ENSSVLG00005019171) #12	RAG1 (ENSSVLG00005019195) #13	TRAF6 (ENSSVLG00005019219) #14	PRR5L (ENSSVLG00005019340) #15	COMMD9 (ENSSVLG00005019522) #16	LDLRAD3 (ENSSVLG00005019672) #17	ENSSVLG00005019782 #18	ENSSVLG00005019851	FJX1 (ENSSVLG00005019889) #19	PAMR1 (ENSSVLG00005019988) #21	SLC1A2 (ENSSVLG00005020571) #22	CD44 (ENSSVLG00005021288) #23	PDHX (ENSSVLG00005021554) #24	APIP (ENSSVLG00005021719) #26	ENSSVLG00005021768 #27	ELF5 (ENSSVLG00005021853) #28	CAT (ENSSVLG00005022137) #29	ENSSVLG00005022214	ABTB2 (ENSSVLG00005004819) #31	NAT10 (ENSSVLG00005004900) #32	CAPRIN1 (ENSSVLG00005004951) #33	LMO2 (ENSSVLG00005005066) #35	FBXO3 (ENSSVLG00005005111) #36	ENSSVLG00005005193	C11orf91 (ENSSVLG00005005211)	KIAA1549L (ENSSVLG00005005254)
Rodentia_B	ANCESTRAL SPECIES	5	ENSGT00940000157226	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Kangaroo rat	MODERN SPECIES	365			Lrrc4c (ENSDORG00000023251) #9	Iftap (ENSDORG00000010963) #11	Rag2 (ENSDORG00000027476) #12	Rag1 (ENSDORG00000028200) #13	Traf6 (ENSDORG00000028957) #14	Prr5l (ENSDORG00000023439) #15	ENSDORG00000023878	Commd9 (ENSDORG00000002082) #16	Ldlrad3 (ENSDORG00000027771) #17	Trim44 (ENSDORG00000003756) #18	Fjx1 (ENSDORG00000028183) #19	Pamr1 (ENSDORG00000009499) #21	ENSDORG00000023527	Slc1a2 (ENSDORG00000014749) #22	ENSDORG00000014748 #23	Pdhx (ENSDORG00000006342) #24	Apip (ENSDORG00000006346) #26	Ehf (ENSDORG00000007642) #27	Elf5 (ENSDORG00000029279) #28	Cat (ENSDORG00000007636) #29	Abtb2 (ENSDORG00000006572) #31	Nat10 (ENSDORG00000006567) #32	Caprin1 (ENSDORG00000006566) #33	Lmo2 (ENSDORG00000010406) #35	Fbxo3 (ENSDORG00000008866) #36	ENSDORG00000026857 #37	A930018P22Rik (ENSDORG00000008868)	ENSDORG00000024985	D430041D05Rik (ENSDORG00000012272)
Myomorpha	ANCESTRAL SPECIES	4	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	79	ENSJJAG00000011645	Spint1 (ENSJJAG00000014215)	Rhov (ENSJJAG00000005067)	Vps18 (ENSJJAG00000015321)	Dll4 (ENSJJAG00000019587)	Ino80 (ENSJJAG00000016166)	ENSJJAG00000000316	ENSJJAG00000005674	ENSJJAG00000018584	ENSJJAG00000004045	Traf6 (ENSJJAG00000019637) #14	ENSJJAG00000024040 #15	ENSJJAG00000009576 #16	Pamr1 (ENSJJAG00000002115) #21	ENSJJAG00000012579 #22	ENSJJAG00000017687 #22	ENSJJAG00000024031 #23	Pdhx (ENSJJAG00000007859) #24	ENSJJAG00000011063 #26	Ehf (ENSJJAG00000023839) #27	Elf5 (ENSJJAG00000003357) #28	Cat (ENSJJAG00000012897) #29	Abtb2 (ENSJJAG00000014143) #31	Nat10 (ENSJJAG00000023042) #32	Lmo2 (ENSJJAG00000020848) #35	Fbxo3 (ENSJJAG00000022887) #36	D430041D05Rik (ENSJJAG00000019415)	Hipk3 (ENSJJAG00000000303)	Cstf3 (ENSJJAG00000018430)	Tcp11l1 (ENSJJAG00000002396)	Ccdc73 (ENSJJAG00000021731)
Lesser Egyptian jerboa	MODERN SPECIES	79	Zfyve19 (ENSJJAG00000022792)	ENSJJAG00000011645	Spint1 (ENSJJAG00000014215)	Rhov (ENSJJAG00000005067)	Vps18 (ENSJJAG00000015321)	Dll4 (ENSJJAG00000019587)	Ino80 (ENSJJAG00000016166)	ENSJJAG00000000316	ENSJJAG00000005674	ENSJJAG00000018584	ENSJJAG00000004045	Traf6 (ENSJJAG00000019637) #14	ENSJJAG00000024040 #15	ENSJJAG00000009576 #16	Pamr1 (ENSJJAG00000002115) #21	ENSJJAG00000012579 #22	ENSJJAG00000017687 #22	ENSJJAG00000024031 #23	Pdhx (ENSJJAG00000007859) #24	ENSJJAG00000011063 #26	Ehf (ENSJJAG00000023839) #27	Elf5 (ENSJJAG00000003357) #28	Cat (ENSJJAG00000012897) #29	Abtb2 (ENSJJAG00000014143) #31	Nat10 (ENSJJAG00000023042) #32	Lmo2 (ENSJJAG00000020848) #35	Fbxo3 (ENSJJAG00000022887) #36	D430041D05Rik (ENSJJAG00000019415)	Hipk3 (ENSJJAG00000000303)	Cstf3 (ENSJJAG00000018430)	Tcp11l1 (ENSJJAG00000002396)
Muroidea	ANCESTRAL SPECIES	2	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Cricetidae	ANCESTRAL SPECIES	5	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Cricetidae_B	ANCESTRAL SPECIES	34	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Northern American deer mouse	MODERN SPECIES	17	Api5 (ENSPEMG00000019874)	ENSPEMG00000012394	Lrrc4c (ENSPEMG00000012198) #9	ENSPEMG00000025399	ENSPEMG00000028280	Iftap (ENSPEMG00000007125) #11	Rag2 (ENSPEMG00000018407) #12	Rag1 (ENSPEMG00000018077) #13	Traf6 (ENSPEMG00000015556) #14	Prr5l (ENSPEMG00000014248) #15	Commd9 (ENSPEMG00000011457) #16	Ldlrad3 (ENSPEMG00000010990) #17	Trim44 (ENSPEMG00000030265) #18	Fjx1 (ENSPEMG00000005586) #19	Pamr1 (ENSPEMG00000012941) #21	Slc1a2 (ENSPEMG00000010827) #22	Cd44 (ENSPEMG00000020598) #23	Pdhx (ENSPEMG00000015465) #24	Apip (ENSPEMG00000012212) #26	Ehf (ENSPEMG00000016561) #27	ENSPEMG00000015756	Elf5 (ENSPEMG00000004489) #28	Cat (ENSPEMG00000005139) #29	Abtb2 (ENSPEMG00000014140) #31	Nat10 (ENSPEMG00000009451) #32	Caprin1 (ENSPEMG00000009832) #33	Lmo2 (ENSPEMG00000000075) #35	Fbxo3 (ENSPEMG00000018420) #36	ENSPEMG00000026456	A930018P22Rik (ENSPEMG00000000170)	D430041D05Rik (ENSPEMG00000020969)
Prairie vole	MODERN SPECIES	81	ENSMOCG00000017344	Lrrc4c (ENSMOCG00000005308) #9	ENSMOCG00000016690	ENSMOCG00000016731	ENSMOCG00000001289	Iftap (ENSMOCG00000016114) #11	Rag2 (ENSMOCG00000011926) #12	Rag1 (ENSMOCG00000008467) #13	Traf6 (ENSMOCG00000016757) #14	Prr5l (ENSMOCG00000020211) #15	Commd9 (ENSMOCG00000021561) #16	Ldlrad3 (ENSMOCG00000000619) #17	Trim44 (ENSMOCG00000006259) #18	Fjx1 (ENSMOCG00000004525) #19	Pamr1 (ENSMOCG00000003031) #21	Slc1a2 (ENSMOCG00000022434) #22	Cd44 (ENSMOCG00000021544) #23	Pdhx (ENSMOCG00000021084) #24	Apip (ENSMOCG00000015378) #26	Ehf (ENSMOCG00000003108) #27	Elf5 (ENSMOCG00000021785) #28	Cat (ENSMOCG00000019198) #29	Abtb2 (ENSMOCG00000013912) #31	Nat10 (ENSMOCG00000021454) #32	Caprin1 (ENSMOCG00000020128) #33	ENSMOCG00000018784	Lmo2 (ENSMOCG00000003531) #35	Fbxo3 (ENSMOCG00000022595) #36	ENSMOCG00000003094	A930018P22Rik (ENSMOCG00000013797)	D430041D05Rik (ENSMOCG00000003074)
Cricetinae	ANCESTRAL SPECIES	1	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00550000074784.a.b	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Golden Hamster	MODERN SPECIES	618	Ttc17 (ENSMAUG00000010822)	ENSMAUG00000008950	Lrrc4c (ENSMAUG00000008203) #9	Iftap (ENSMAUG00000010224) #11	Rag2 (ENSMAUG00000010934) #12	Rag1 (ENSMAUG00000010819) #13	Traf6 (ENSMAUG00000005756) #14	Prr5l (ENSMAUG00000004032) #15	Commd9 (ENSMAUG00000003287) #16	Ldlrad3 (ENSMAUG00000009660) #17	ENSMAUG00000010163	ENSMAUG00000010071	Trim44 (ENSMAUG00000008730) #18	Fjx1 (ENSMAUG00000002426) #19	Pamr1 (ENSMAUG00000007447) #21	Slc1a2 (ENSMAUG00000008324) #22	Cd44 (ENSMAUG00000004546) #23	Pdhx (ENSMAUG00000002883) #24	Apip (ENSMAUG00000001671) #26	Ehf (ENSMAUG00000004776) #27	Elf5 (ENSMAUG00000003650) #28	Cat (ENSMAUG00000012493) #29	Abtb2 (ENSMAUG00000011208) #31	ENSMAUG00000010653 #32	ENSMAUG00000010029 #32	Caprin1 (ENSMAUG00000008906) #33	Lmo2 (ENSMAUG00000006848) #35	ENSMAUG00000005850 #36	ENSMAUG00000003722	A930018P22Rik (ENSMAUG00000002950)	D430041D05Rik (ENSMAUG00000010328)
Chinese hamster chok1gshd	MODERN SPECIES	188	Lrrc4c (ENSCGRG00001011183) #9	ENSCGRG00001011370	ENSCGRG00001002351	ENSCGRG00001003416	Iftap (ENSCGRG00001020974) #11	Rag2 (ENSCGRG00001011151) #12	Rag1 (ENSCGRG00001002046) #13	Traf6 (ENSCGRG00001019275) #14	Prr5l (ENSCGRG00001018581) #15	ENSCGRG00001017501 #16	Ldlrad3 (ENSCGRG00001024912) #17	ENSCGRG00001024835	Trim44 (ENSCGRG00001024631) #18	Fjx1 (ENSCGRG00001010732) #19	Pamr1 (ENSCGRG00001023148) #21	Slc1a2 (ENSCGRG00001023537) #22	Cd44 (ENSCGRG00001022042) #23	Pdhx (ENSCGRG00001020048) #24	APIP (ENSCGRG00001019435) #26	Ehf (ENSCGRG00001018872) #27	Elf5 (ENSCGRG00001017703) #28	Cat (ENSCGRG00001022758) #29	Abtb2 (ENSCGRG00001022262) #31	NAT10 (ENSCGRG00001010534) #32	Caprin1 (ENSCGRG00001006383) #33	Lmo2 (ENSCGRG00001003942) #35	ENSCGRG00001002101	Fbxo3 (ENSCGRG00001019997) #36	ENSCGRG00001019416	A930018P22Rik (ENSCGRG00001018837)	D430041D05Rik (ENSCGRG00001017776)
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Mus	ANCESTRAL SPECIES	1	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00940000153571.b #36	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b	ENSGT00940000155960.b
Mus_A	ANCESTRAL SPECIES		ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00860000136352	ENSGT00940000153571.b #36	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00860000136352	ENSGT00940000153571.b #36	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b
Mouse	MODERN SPECIES	11	Alkbh3 (ENSMUSG00000040174)	Hsd17b12 (ENSMUSG00000027195)	Ttc17 (ENSMUSG00000027194)	Api5 (ENSMUSG00000027193)	Lrrc4c (ENSMUSG00000050587) #9	Iftap (ENSMUSG00000027165) #11	Rag2 (ENSMUSG00000032864) #12	Rag1 (ENSMUSG00000061311) #13	Traf6 (ENSMUSG00000027164) #14	Prr5l (ENSMUSG00000032841) #15	Commd9 (ENSMUSG00000027163) #16	Ldlrad3 (ENSMUSG00000048058) #17	Trim44 (ENSMUSG00000027189) #18	Fjx1 (ENSMUSG00000075012) #19	Pamr1 (ENSMUSG00000027188) #21	Slc1a2 (ENSMUSG00000005089) #22	Cd44 (ENSMUSG00000005087) #23	Pdhx (ENSMUSG00000010914) #24	Apip (ENSMUSG00000010911) #26	Ehf (ENSMUSG00000012350) #27	Elf5 (ENSMUSG00000027186) #28	Cat (ENSMUSG00000027187) #29	Abtb2 (ENSMUSG00000032724) #31	Nat10 (ENSMUSG00000027185) #32	Caprin1 (ENSMUSG00000027184) #33	Lmo2 (ENSMUSG00000032698) #35	Fbxo3 (ENSMUSG00000027180) #36	Cd59b (ENSMUSG00000068686)	Cd59a (ENSMUSG00000032679)	A930018P22Rik (ENSMUSG00000032671)	D430041D05Rik (ENSMUSG00000068373)
Mus_C	ANCESTRAL SPECIES		ENSGT00940000157226.f	ENSGT00940000154860	ENSGT00390000006196	ENSGT00390000010991	ENSGT00940000157405 #9	ENSGT00390000013149 #11	ENSGT00390000012559 #12	ENSGT00390000008679 #13	ENSGT00940000155426 #14	ENSGT00530000063981.b #15	ENSGT00390000006218 #16	ENSGT00940000160574 #17	ENSGT00440000034605 #18	ENSGT00390000016768 #19	ENSGT00940000154234.a #21	ENSGT00940000155379 #22	ENSGT00530000063822.a.a #23	ENSGT00940000156046 #24	ENSGT00390000001680 #26	ENSGT00940000159310 #27	ENSGT00940000160980 #28	ENSGT00390000018100 #29	ENSGT00940000157661 #31	ENSGT00390000009140 #32	ENSGT00940000153438.a #33	ENSGT00940000160199 #35	ENSGT00860000136352	ENSGT00940000153571.b #36	ENSGT00390000016309.j	ENSGT00390000002169	ENSGT00530000063472.b.b.a.b
Steppe mouse	MODERN SPECIES	12					Iftap (ENSMSIG00000004799) #11	Rag2 (ENSMSIG00000004837) #12	Rag1 (ENSMSIG00000004846) #13	Traf6 (ENSMSIG00000004857) #14	Prr5l (ENSMSIG00000004870) #15	Commd9 (ENSMSIG00000004921) #16	Ldlrad3 (ENSMSIG00000004965) #17	ENSMSIG00000004991	Trim44 (ENSMSIG00000005008) #18	Fjx1 (ENSMSIG00000005059) #19	Pamr1 (ENSMSIG00000005073) #21	Slc1a2 (ENSMSIG00000005100) #22	Cd44 (ENSMSIG00000005261) #23	Pdhx (ENSMSIG00000006094) #24	ENSMSIG00000006147 #26	Ehf (ENSMSIG00000006198) #27	Elf5 (ENSMSIG00000006297) #28	Cat (ENSMSIG00000006347) #29	Abtb2 (ENSMSIG00000006424) #31	ENSMSIG00000006529	Nat10 (ENSMSIG00000006539) #32	Caprin1 (ENSMSIG00000006606) #33	Lmo2 (ENSMSIG00000006713) #35	ENSMSIG00000006746	Fbxo3 (ENSMSIG00000006767) #36
spretus	MODERN SPECIES	11	Alkbh3 (MGP_SPRETEiJ_G0024905)	Hsd17b12 (MGP_SPRETEiJ_G0024906)	Ttc17 (MGP_SPRETEiJ_G0024907)	Api5 (MGP_SPRETEiJ_G0024908)	Lrrc4c (MGP_SPRETEiJ_G0024909) #9	Iftap (MGP_SPRETEiJ_G0024910) #11	Rag2 (MGP_SPRETEiJ_G0024911) #12	Rag1 (MGP_SPRETEiJ_G0024912) #13	Traf6 (MGP_SPRETEiJ_G0024913) #14	Prr5l (MGP_SPRETEiJ_G0024914) #15	Commd9 (MGP_SPRETEiJ_G0024915) #16	Ldlrad3 (MGP_SPRETEiJ_G0024916) #17	Trim44 (MGP_SPRETEiJ_G0024917) #18	Fjx1 (MGP_SPRETEiJ_G0024918) #19	Pamr1 (MGP_SPRETEiJ_G0024919) #21	Slc1a2 (MGP_SPRETEiJ_G0024920) #22	Cd44 (MGP_SPRETEiJ_G0024921) #23	Pdhx (MGP_SPRETEiJ_G0024922) #24	Apip (MGP_SPRETEiJ_G0024923) #26	Ehf (MGP_SPRETEiJ_G0024924) #27	Elf5 (MGP_SPRETEiJ_G0024925) #28	Cat (MGP_SPRETEiJ_G0024926) #29	Abtb2 (MGP_SPRETEiJ_G0024927) #31	Nat10 (MGP_SPRETEiJ_G0024928) #32	Caprin1 (MGP_SPRETEiJ_G0024929) #33	Lmo2 (MGP_SPRETEiJ_G0024930) #35	MGP_SPRETEiJ_G0024931	Fbxo3 (MGP_SPRETEiJ_G0024932) #36	Cd59a (MGP_SPRETEiJ_G0024933)	A930018P22Rik (MGP_SPRETEiJ_G0024935)	D430041D05Rik (MGP_SPRETEiJ_G0024936)
Ryukyu mouse	MODERN SPECIES	11	Alkbh3 (MGP_CAROLIEiJ_G0023995)	MGP_CAROLIEiJ_G0023996	Ttc17 (MGP_CAROLIEiJ_G0023997)	Api5 (MGP_CAROLIEiJ_G0023998)	Lrrc4c (MGP_CAROLIEiJ_G0023999) #9	Iftap (MGP_CAROLIEiJ_G0024000) #11	Rag2 (MGP_CAROLIEiJ_G0024001) #12	Rag1 (MGP_CAROLIEiJ_G0024002) #13	Traf6 (MGP_CAROLIEiJ_G0024003) #14	Prr5l (MGP_CAROLIEiJ_G0024004) #15	Commd9 (MGP_CAROLIEiJ_G0024005) #16	Ldlrad3 (MGP_CAROLIEiJ_G0024006) #17	Trim44 (MGP_CAROLIEiJ_G0024007) #18	Fjx1 (MGP_CAROLIEiJ_G0024008) #19	Pamr1 (MGP_CAROLIEiJ_G0024009) #21	Slc1a2 (MGP_CAROLIEiJ_G0024010) #22	Cd44 (MGP_CAROLIEiJ_G0024011) #23	Pdhx (MGP_CAROLIEiJ_G0024012) #24	Apip (MGP_CAROLIEiJ_G0024013) #26	Ehf (MGP_CAROLIEiJ_G0024014) #27	Elf5 (MGP_CAROLIEiJ_G0024015) #28	Cat (MGP_CAROLIEiJ_G0024016) #29	Abtb2 (MGP_CAROLIEiJ_G0024017) #31	MGP_CAROLIEiJ_G0024018 #32	Caprin1 (MGP_CAROLIEiJ_G0024019) #33	Lmo2 (MGP_CAROLIEiJ_G0024020) #35	MGP_CAROLIEiJ_G0024021	Fbxo3 (MGP_CAROLIEiJ_G0024022) #36	A930018P22Rik (MGP_CAROLIEiJ_G0024023)	MGP_CAROLIEiJ_G0024024	Hipk3 (MGP_CAROLIEiJ_G0024025)
Shrew mouse	MODERN SPECIES	16	Alkbh3 (MGP_PahariEiJ_G0025431)	Hsd17b12 (MGP_PahariEiJ_G0025432)	Ttc17 (MGP_PahariEiJ_G0025433)	Api5 (MGP_PahariEiJ_G0025434)	Lrrc4c (MGP_PahariEiJ_G0025435) #9	MGP_PahariEiJ_G0025436 #11	Rag2 (MGP_PahariEiJ_G0025437) #12	Rag1 (MGP_PahariEiJ_G0025438) #13	Traf6 (MGP_PahariEiJ_G0025439) #14	Prr5l (MGP_PahariEiJ_G0025440) #15	Commd9 (MGP_PahariEiJ_G0025441) #16	Ldlrad3 (MGP_PahariEiJ_G0025442) #17	Trim44 (MGP_PahariEiJ_G0025443) #18	Fjx1 (MGP_PahariEiJ_G0025444) #19	Pamr1 (MGP_PahariEiJ_G0025445) #21	Slc1a2 (MGP_PahariEiJ_G0025446) #22	Cd44 (MGP_PahariEiJ_G0025447) #23	Pdhx (MGP_PahariEiJ_G0025448) #24	Apip (MGP_PahariEiJ_G0025449) #26	Ehf (MGP_PahariEiJ_G0025450) #27	Elf5 (MGP_PahariEiJ_G0025451) #28	Cat (MGP_PahariEiJ_G0025452) #29	Abtb2 (MGP_PahariEiJ_G0025453) #31	Nat10 (MGP_PahariEiJ_G0025454) #32	Caprin1 (MGP_PahariEiJ_G0025455) #33	Lmo2 (MGP_PahariEiJ_G0025456) #35	MGP_PahariEiJ_G0025457	Fbxo3 (MGP_PahariEiJ_G0025458) #36	MGP_PahariEiJ_G0025459	MGP_PahariEiJ_G0025460	A930018P22Rik (MGP_PahariEiJ_G0025461)
Rat	MODERN SPECIES	13	ENSRNOG00000066316	Lrrc4c (ENSRNOG00000029798) #9	AABR07053065.1 (ENSRNOG00000004381)	LOC499843 (ENSRNOG00000032177)	Iftap (ENSRNOG00000037567) #11	Rag2 (ENSRNOG00000004623) #12	Rag1 (ENSRNOG00000004630) #13	Traf6 (ENSRNOG00000004639) #14	Prr5l (ENSRNOG00000004666) #15	Commd9 (ENSRNOG00000004755) #16	Ldlrad3 (ENSRNOG00000058157) #17	Rpl21 (ENSRNOG00000069969)	Trim44 (ENSRNOG00000005191) #18	Fjx1 (ENSRNOG00000005347) #19	Pamr1 (ENSRNOG00000005348) #21	Slc1a2 (ENSRNOG00000005479) #22	Cd44 (ENSRNOG00000006094) #23	Pdhx (ENSRNOG00000006947) #24	Apip (ENSRNOG00000007446) #26	Ehf (ENSRNOG00000007484) #27	Elf5 (ENSRNOG00000008282) #28	Cat (ENSRNOG00000008364) #29	Abtb2 (ENSRNOG00000008510) #31	Nat10 (ENSRNOG00000008663) #32	Caprin1 (ENSRNOG00000009152) #33	ENSRNOG00000063191	Lmo2 (ENSRNOG00000009401) #35	Fbxo3 (ENSRNOG00000009549) #36	Cd59 (ENSRNOG00000042821)	RGD1563222 (ENSRNOG00000010963)	LOC100362814 (ENSRNOG00000011132)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1631						Iftap (ENSNGAG00000018262) #11	Rag2 (ENSNGAG00000015708) #12	Rag1 (ENSNGAG00000006347) #13	Traf6 (ENSNGAG00000018446) #14	ENSNGAG00000011864	Prr5l (ENSNGAG00000021774) #15	Commd9 (ENSNGAG00000015597) #16	Ldlrad3 (ENSNGAG00000004668) #17	Trim44 (ENSNGAG00000014577) #18	Pamr1 (ENSNGAG00000018952) #21	Slc1a2 (ENSNGAG00000011178) #22	Cd44 (ENSNGAG00000019111) #23	Pdhx (ENSNGAG00000023421) #24	Apip (ENSNGAG00000022366) #26	Ehf (ENSNGAG00000022135) #27	Elf5 (ENSNGAG00000021632) #28	Cat (ENSNGAG00000000722) #29	Abtb2 (ENSNGAG00000010042) #31	Nat10 (ENSNGAG00000013486) #32	Caprin1 (ENSNGAG00000006106) #33