Vertebrata ANCESTRAL SPECIES 186 ENSGT00940000154234 #21 ENSGT00940000155379 #22 ENSGT00530000063822 #23 Gnathostomata ANCESTRAL SPECIES 460 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 Euteleostomi ANCESTRAL SPECIES 328 ENSGT00390000006218 #16 ENSGT00530000063981.b #15 ENSGT00940000155426 #14 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 Sarcopterygii ANCESTRAL SPECIES 244 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 Tetrapoda ANCESTRAL SPECIES 9 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00940000157530.b ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Amniota ANCESTRAL SPECIES 20 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00940000157530.b ENSGT00730000111007.a.b ENSGT00940000164361 Mammalia ANCESTRAL SPECIES 9 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Theria ANCESTRAL SPECIES 8 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Eutheria ANCESTRAL SPECIES 3 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Boreoeutheria ANCESTRAL SPECIES 1 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Euarchontoglires ANCESTRAL SPECIES 1 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Primates ANCESTRAL SPECIES ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Strepsirrhini ANCESTRAL SPECIES 6 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.c #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Bushbaby MODERN SPECIES 116 LRRC4C (ENSOGAG00000001283) #7 ENSOGAG00000025009 #8 ENSOGAG00000031537 #9 ENSOGAG00000029194 #10 IFTAP (ENSOGAG00000011890) #11 ENSOGAG00000031605 #12 ENSOGAG00000027339 #13 TRAF6 (ENSOGAG00000007506) #14 PRR5L (ENSOGAG00000007503) #15 COMMD9 (ENSOGAG00000016261) #16 LDLRAD3 (ENSOGAG00000016253) #17 ENSOGAG00000030890 #18 TRIM44 (ENSOGAG00000016248) #19 FJX1 (ENSOGAG00000027707) #20 PAMR1 (ENSOGAG00000016246) #21 SLC1A2 (ENSOGAG00000016241) #22 CD44 (ENSOGAG00000016233) #23 PDHX (ENSOGAG00000015641) #24 APIP (ENSOGAG00000015637) #25 EHF (ENSOGAG00000015942) #26 ELF5 (ENSOGAG00000006242) #27 CAT (ENSOGAG00000006240) #28 ABTB2 (ENSOGAG00000000457) #29 NAT10 (ENSOGAG00000016737) #30 CAPRIN1 (ENSOGAG00000016733) #31 LMO2 (ENSOGAG00000014321) #32 FBXO3 (ENSOGAG00000014318) #33 CD59 (ENSOGAG00000003325) #34 C11orf91 (ENSOGAG00000033539) #35 KIAA1549L (ENSOGAG00000003316) #36 HIPK3 (ENSOGAG00000008857) #37 Lemuriformes ANCESTRAL SPECIES 16 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.c #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Mouse lemur MODERN SPECIES 27 C11orf96 (ENSMICG00000041610) ALKBH3 (ENSMICG00000014651) HSD17B12 (ENSMICG00000014632) TTC17 (ENSMICG00000014602) ENSMICG00000014581 LRRC4C (ENSMICG00000047157) #7 ENSMICG00000043108 IFTAP (ENSMICG00000008620) #11 TRAF6 (ENSMICG00000008604) #14 PRR5L (ENSMICG00000047184) #15 COMMD9 (ENSMICG00000008594) #16 LDLRAD3 (ENSMICG00000008590) #17 TRIM44 (ENSMICG00000008587) #19 FJX1 (ENSMICG00000033879) #20 PAMR1 (ENSMICG00000003733) #21 SLC1A2 (ENSMICG00000003719) #22 CD44 (ENSMICG00000003713) #23 ENSMICG00000036406 PDHX (ENSMICG00000003700) #24 APIP (ENSMICG00000003696) #25 EHF (ENSMICG00000003694) #26 ENSMICG00000038699 ELF5 (ENSMICG00000003689) #27 CAT (ENSMICG00000003672) #28 ABTB2 (ENSMICG00000003665) #29 NAT10 (ENSMICG00000003627) #30 CAPRIN1 (ENSMICG00000003617) #31 LMO2 (ENSMICG00000027826) #32 FBXO3 (ENSMICG00000012713) #33 CD59 (ENSMICG00000037109) #34 C11orf91 (ENSMICG00000042497) #35 Lemuriformes_a ANCESTRAL SPECIES 92 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.c #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Coquerels sifaka MODERN SPECIES 425 IFTAP (ENSPCOG00000014571) #11 TRAF6 (ENSPCOG00000002649) #14 PRR5L (ENSPCOG00000016168) #15 COMMD9 (ENSPCOG00000027062) #16 LDLRAD3 (ENSPCOG00000018799) #17 TRIM44 (ENSPCOG00000017249) #19 FJX1 (ENSPCOG00000012141) #20 PAMR1 (ENSPCOG00000021819) #21 SLC1A2 (ENSPCOG00000024058) #22 CD44 (ENSPCOG00000025918) #23 PDHX (ENSPCOG00000018230) #24 APIP (ENSPCOG00000000871) #25 EHF (ENSPCOG00000015717) #26 ELF5 (ENSPCOG00000021457) #27 CAT (ENSPCOG00000017699) #28 ABTB2 (ENSPCOG00000028529) #29 NAT10 (ENSPCOG00000009633) #30 CAPRIN1 (ENSPCOG00000021422) #31 LMO2 (ENSPCOG00000002410) #32 ENSPCOG00000018436 #33 CD59 (ENSPCOG00000012858) #34 C11orf91 (ENSPCOG00000023742) #35 KIAA1549L (ENSPCOG00000022400) #36 ENSPCOG00000018218 Greater bamboo lemur MODERN SPECIES 820 RAG2 (ENSPSMG00000025673) #12 RAG1 (ENSPSMG00000025677) #13 TRAF6 (ENSPSMG00000025679) #14 PRR5L (ENSPSMG00000025683) #15 COMMD9 (ENSPSMG00000025691) #16 LDLRAD3 (ENSPSMG00000025694) #17 TRIM44 (ENSPSMG00000025695) #19 FJX1 (ENSPSMG00000025697) #20 PAMR1 (ENSPSMG00000025723) #21 SLC1A2 (ENSPSMG00000025760) #22 ENSPSMG00000025770 #23 ENSPSMG00000025776 ##23 PDHX (ENSPSMG00000025782) #24 APIP (ENSPSMG00000025789) #25 ENSPSMG00000025796 #26 Haplorrhini ANCESTRAL SPECIES ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Tarsier MODERN SPECIES 6464 PAMR1 (ENSTSYG00000036898) #21 SLC1A2 (ENSTSYG00000037473) #22 ENSTSYG00000030847 #23 Simiiformes ANCESTRAL SPECIES ENSGT00520000059086 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Catarrhini ANCESTRAL SPECIES 1 ENSGT00520000059086 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Hominoidea ANCESTRAL SPECIES 1 ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000155067.a.a.a ENSGT00940000153571.b #33 ENSGT00390000016309 #34 Hominidae ANCESTRAL SPECIES 1 ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000155067.a.a.a ENSGT00940000153571.b #33 ENSGT00390000016309 #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 20 ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000155067.a.a.a ENSGT00940000153571.b #33 ENSGT00390000016309 #34 Homo/Pan group ANCESTRAL SPECIES 1 ENSGT00940000154860.q ENSGT00940000154430.e.b ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000155067.a.a.a ENSGT00940000153571.b #33 ENSGT00390000016309 #34 Pan ANCESTRAL SPECIES 1 ENSGT00940000154430.e.b ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00940000153309.c.b.a.b.b.a.b.b ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000155067.a.a.a ENSGT00940000153571.b #33 ENSGT00390000016309 #34 Bonobo MODERN SPECIES 2 ENSPPAG00000035030 TTC17 (ENSPPAG00000036754) API5 (ENSPPAG00000035313) LRRC4C (ENSPPAG00000005583) #7 IFTAP (ENSPPAG00000024881) #11 RAG2 (ENSPPAG00000004799) #12 RAG1 (ENSPPAG00000043768) #13 TRAF6 (ENSPPAG00000042961) #14 PRR5L (ENSPPAG00000042360) #15 COMMD9 (ENSPPAG00000036714) #16 LDLRAD3 (ENSPPAG00000025202) #17 ENSPPAG00000034541 TRIM44 (ENSPPAG00000002641) #19 ENSPPAG00000041553 #20 PAMR1 (ENSPPAG00000025516) #21 SLC1A2 (ENSPPAG00000030524) #22 ENSPPAG00000037465 CD44 (ENSPPAG00000043653) #23 PDHX (ENSPPAG00000030642) #24 ENSPPAG00000034280 #25 EHF (ENSPPAG00000035904) #26 ELF5 (ENSPPAG00000031806) #27 CAT (ENSPPAG00000039204) #28 ABTB2 (ENSPPAG00000039240) #29 NAT10 (ENSPPAG00000036069) #30 CAPRIN1 (ENSPPAG00000016974) #31 ENSPPAG00000038435 ENSPPAG00000036263 #32 ENSPPAG00000016006 FBXO3 (ENSPPAG00000032146) #33 CD59 (ENSPPAG00000036733) #34 Chimpanzee MODERN SPECIES 2 ENSPTRG00000048907 TTC17 (ENSPTRG00000003518) API5 (ENSPTRG00000003516) LRRC4C (ENSPTRG00000003515) #7 IFTAP (ENSPTRG00000003514) #11 RAG2 (ENSPTRG00000003513) #12 RAG1 (ENSPTRG00000050436) #13 TRAF6 (ENSPTRG00000003510) #14 PRR5L (ENSPTRG00000003509) #15 COMMD9 (ENSPTRG00000049063) #16 LDLRAD3 (ENSPTRG00000003507) #17 ENSPTRG00000044139 TRIM44 (ENSPTRG00000003504) #19 FJX1 (ENSPTRG00000041394) #20 PAMR1 (ENSPTRG00000003503) #21 SLC1A2 (ENSPTRG00000003502) #22 ENSPTRG00000048633 CD44 (ENSPTRG00000003501) #23 PDHX (ENSPTRG00000003500) #24 APIP (ENSPTRG00000003499) #25 EHF (ENSPTRG00000003498) #26 ELF5 (ENSPTRG00000003497) #27 CAT (ENSPTRG00000003496) #28 ABTB2 (ENSPTRG00000003495) #29 NAT10 (ENSPTRG00000003494) #30 CAPRIN1 (ENSPTRG00000003493) #31 ENSPTRG00000003492 LMO2 (ENSPTRG00000003491) #32 ENSPTRG00000047371 FBXO3 (ENSPTRG00000003490) #33 CD59 (ENSPTRG00000003489) #35 Human MODERN SPECIES 2 ALKBH3 (ENSG00000166199) HSD17B12 (ENSG00000149084) TTC17 (ENSG00000052841) API5 (ENSG00000166181) LRRC4C (ENSG00000148948) #7 IFTAP (ENSG00000166352) #11 RAG2 (ENSG00000175097) #12 RAG1 (ENSG00000166349) #13 TRAF6 (ENSG00000175104) #14 PRR5L (ENSG00000135362) #15 COMMD9 (ENSG00000110442) #16 LDLRAD3 (ENSG00000179241) #17 TRIM44 (ENSG00000166326) #19 FJX1 (ENSG00000179431) #20 PAMR1 (ENSG00000149090) #21 SLC1A2 (ENSG00000110436) #22 CD44 (ENSG00000026508) #23 PDHX (ENSG00000110435) #24 APIP (ENSG00000149089) #25 EHF (ENSG00000135373) #26 ELF5 (ENSG00000135374) #27 CAT (ENSG00000121691) #28 ABTB2 (ENSG00000166016) #29 NAT10 (ENSG00000135372) #30 CAPRIN1 (ENSG00000135387) #31 LMO2 (ENSG00000135363) #32 FBXO3 (ENSG00000110429) #33 CD59 (ENSG00000085063) #34 ENSG00000284969 C11orf91 (ENSG00000205177) #35 KIAA1549L (ENSG00000110427) #36 Gorilla MODERN SPECIES 2 API5 (ENSGGOG00000002358) LRRC4C (ENSGGOG00000006776) #7 ENSGGOG00000024548 IFTAP (ENSGGOG00000004773) #11 RAG2 (ENSGGOG00000027505) #12 RAG1 (ENSGGOG00000041736) #13 TRAF6 (ENSGGOG00000005854) #14 PRR5L (ENSGGOG00000008909) #15 COMMD9 (ENSGGOG00000012472) #16 LDLRAD3 (ENSGGOG00000016627) #17 ENSGGOG00000024203 ENSGGOG00000037454 TRIM44 (ENSGGOG00000004970) #19 FJX1 (ENSGGOG00000026577) #20 PAMR1 (ENSGGOG00000014257) #21 SLC1A2 (ENSGGOG00000041651) #22 ENSGGOG00000043068 CD44 (ENSGGOG00000000851) #23 PDHX (ENSGGOG00000001206) #24 APIP (ENSGGOG00000022940) #25 EHF (ENSGGOG00000006149) #26 ELF5 (ENSGGOG00000006882) #27 CAT (ENSGGOG00000010662) #28 ABTB2 (ENSGGOG00000014588) #29 NAT10 (ENSGGOG00000014560) #30 CAPRIN1 (ENSGGOG00000010997) #31 LMO2 (ENSGGOG00000024903) #32 ENSGGOG00000042559 FBXO3 (ENSGGOG00000001949) #33 ENSGGOG00000041311 #34 KIAA1549L (ENSGGOG00000004207) #36 Orangutan MODERN SPECIES 2 ALKBH3 (ENSPPYG00000003342) HSD17B12 (ENSPPYG00000003343) TTC17 (ENSPPYG00000003344) API5 (ENSPPYG00000003345) LRRC4C (ENSPPYG00000003346) #7 IFTAP (ENSPPYG00000003347) #11 RAG2 (ENSPPYG00000003348) #12 RAG1 (ENSPPYG00000034216) #13 TRAF6 (ENSPPYG00000003350) #14 PRR5L (ENSPPYG00000003351) #15 COMMD9 (ENSPPYG00000003352) #16 LDLRAD3 (ENSPPYG00000003354) #17 TRIM44 (ENSPPYG00000003355) #19 FJX1 (ENSPPYG00000038455) #20 PAMR1 (ENSPPYG00000003356) #21 SLC1A2 (ENSPPYG00000003357) #22 CD44 (ENSPPYG00000032340) #23 PDHX (ENSPPYG00000003360) #24 APIP (ENSPPYG00000003361) #25 ENSPPYG00000034760 EHF (ENSPPYG00000003362) #26 ELF5 (ENSPPYG00000003363) #27 CAT (ENSPPYG00000003364) #28 ABTB2 (ENSPPYG00000003365) #29 NAT10 (ENSPPYG00000003367) #30 CAPRIN1 (ENSPPYG00000029386) #31 LMO2 (ENSPPYG00000003368) #32 FBXO3 (ENSPPYG00000003369) #33 CD59 (ENSPPYG00000003370) #34 C11orf91 (ENSPPYG00000038055) #35 KIAA1549L (ENSPPYG00000003373) #36 Gibbon MODERN SPECIES 5 TTC17 (ENSNLEG00000017958) API5 (ENSNLEG00000017956) LRRC4C (ENSNLEG00000017955) #7 IFTAP (ENSNLEG00000017953) #11 RAG2 (ENSNLEG00000017952) #12 RAG1 (ENSNLEG00000017951) #13 TRAF6 (ENSNLEG00000017949) #14 PRR5L (ENSNLEG00000017945) #15 COMMD9 (ENSNLEG00000017943) #16 LDLRAD3 (ENSNLEG00000017940) #17 ENSNLEG00000033071 ENSNLEG00000034033 TRIM44 (ENSNLEG00000017939) #19 FJX1 (ENSNLEG00000018184) #20 PAMR1 (ENSNLEG00000017937) #21 SLC1A2 (ENSNLEG00000032279) #22 ENSNLEG00000031295 CD44 (ENSNLEG00000017932) #23 PDHX (ENSNLEG00000017930) #24 APIP (ENSNLEG00000028265) #25 EHF (ENSNLEG00000017927) #26 ELF5 (ENSNLEG00000017925) #27 CAT (ENSNLEG00000017922) #28 ENSNLEG00000027640 ENSNLEG00000017921 #29 NAT10 (ENSNLEG00000017916) #30 CAPRIN1 (ENSNLEG00000017913) #31 LMO2 (ENSNLEG00000028429) #32 ENSNLEG00000018183 FBXO3 (ENSNLEG00000017908) #33 ENSNLEG00000027673 #34 Cercopithecidae ANCESTRAL SPECIES ENSGT00520000059086 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Cercopithecinae ANCESTRAL SPECIES 3 ENSGT00940000154430.e.b ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991.e ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Vervet Monkey MODERN SPECIES TTC17 (ENSCSAG00000005526) API5 (ENSCSAG00000005506) LRRC4C (ENSCSAG00000019212) #7 ENSCSAG00000005494 IFTAP (ENSCSAG00000005492) #11 RAG2 (ENSCSAG00000019213) #12 RAG1 (ENSCSAG00000005489) #13 TRAF6 (ENSCSAG00000005486) #14 PRR5L (ENSCSAG00000005478) #15 COMMD9 (ENSCSAG00000005477) #16 ENSCSAG00000019214 LDLRAD3 (ENSCSAG00000005472) #17 TRIM44 (ENSCSAG00000005470) #19 FJX1 (ENSCSAG00000019315) #20 PAMR1 (ENSCSAG00000005463) #21 SLC1A2 (ENSCSAG00000005437) #22 CD44 (ENSCSAG00000005433) #23 PDHX (ENSCSAG00000005431) #24 APIP (ENSCSAG00000005426) #25 EHF (ENSCSAG00000005424) #26 ELF5 (ENSCSAG00000005423) #27 CAT (ENSCSAG00000005418) #28 ABTB2 (ENSCSAG00000005406) #29 NAT10 (ENSCSAG00000005383) #30 CAPRIN1 (ENSCSAG00000005378) #31 LMO2 (ENSCSAG00000005369) #32 FBXO3 (ENSCSAG00000005366) #33 CD59 (ENSCSAG00000005360) #34 C11orf91 (ENSCSAG00000005348) #35 KIAA1549L (ENSCSAG00000005316) #36 HIPK3 (ENSCSAG00000005298) #37 Cercopithecinae_a ANCESTRAL SPECIES 2 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 #7 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Macaca ANCESTRAL SPECIES 2 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 #7 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Pig-tailed macaque MODERN SPECIES 485 ENSMNEG00000013022 ENSMNEG00000008856 LRRC4C (ENSMNEG00000017892) #7 ENSMNEG00000032979 IFTAP (ENSMNEG00000044678) #11 RAG2 (ENSMNEG00000022173) #12 RAG1 (ENSMNEG00000007591) #13 TRAF6 (ENSMNEG00000042176) #14 PRR5L (ENSMNEG00000043138) #15 COMMD9 (ENSMNEG00000030213) #16 LDLRAD3 (ENSMNEG00000037863) #17 ENSMNEG00000045218 TRIM44 (ENSMNEG00000039165) #19 FJX1 (ENSMNEG00000021210) #20 PAMR1 (ENSMNEG00000038968) #21 SLC1A2 (ENSMNEG00000033227) #22 ENSMNEG00000027059 CD44 (ENSMNEG00000024975) #23 PDHX (ENSMNEG00000041540) #24 APIP (ENSMNEG00000037577) #25 EHF (ENSMNEG00000035998) #26 ELF5 (ENSMNEG00000036605) #27 CAT (ENSMNEG00000043629) #28 ENSMNEG00000043168 ABTB2 (ENSMNEG00000011772) #29 NAT10 (ENSMNEG00000041284) #30 CAPRIN1 (ENSMNEG00000030485) #31 LMO2 (ENSMNEG00000031732) #32 FBXO3 (ENSMNEG00000045464) #33 C11orf91 (ENSMNEG00000033587) #35 KIAA1549L (ENSMNEG00000040724) #36 Macaca_a ANCESTRAL SPECIES 3 ENSGT00390000006196 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT01030000240096 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000165497.F.b.b.a.b.a ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Crab-eating macaque MODERN SPECIES 5 ENSMFAG00000050969 ENSMFAG00000063906 LRRC4C (ENSMFAG00000030573) #7 ENSMFAG00000038539 ENSMFAG00000051896 IFTAP (ENSMFAG00000001278) #11 RAG2 (ENSMFAG00000029426) #12 RAG1 (ENSMFAG00000011988) #13 TRAF6 (ENSMFAG00000040017) #14 PRR5L (ENSMFAG00000059336) #15 COMMD9 (ENSMFAG00000060407) #16 LDLRAD3 (ENSMFAG00000043269) #17 ENSMFAG00000065530 TRIM44 (ENSMFAG00000045833) #19 PAMR1 (ENSMFAG00000042856) #21 SLC1A2 (ENSMFAG00000043293) #22 CD44 (ENSMFAG00000043892) #23 PDHX (ENSMFAG00000042807) #24 APIP (ENSMFAG00000031416) #25 EHF (ENSMFAG00000029447) #26 ELF5 (ENSMFAG00000046400) #27 ENSMFAG00000065345 CAT (ENSMFAG00000000437) #28 ENSMFAG00000001208 #29 NAT10 (ENSMFAG00000041013) #30 CAPRIN1 (ENSMFAG00000038273) #31 ENSMFAG00000065168 LMO2 (ENSMFAG00000038993) #32 FBXO3 (ENSMFAG00000044515) #33 C11orf91 (ENSMFAG00000032872) #35 ENSMFAG00000061345 Rhesus MODERN SPECIES 5 API5 (ENSMMUG00000008827) ENSMMUG00000049945 ENSMMUG00000049895 LRRC4C (ENSMMUG00000007945) #7 IFTAP (ENSMMUG00000018269) #11 RAG2 (ENSMMUG00000018268) #12 RAG1 (ENSMMUG00000049488) #13 TRAF6 (ENSMMUG00000018266) #14 PRR5L (ENSMMUG00000018265) #15 COMMD9 (ENSMMUG00000007095) #16 LDLRAD3 (ENSMMUG00000007093) #17 ENSMMUG00000051870 TRIM44 (ENSMMUG00000004332) #19 FJX1 (ENSMMUG00000004331) #20 PAMR1 (ENSMMUG00000004330) #21 SLC1A2 (ENSMMUG00000004329) #22 CD44 (ENSMMUG00000004327) #23 PDHX (ENSMMUG00000006448) #24 APIP (ENSMMUG00000006447) #25 ENSMMUG00000057784 EHF (ENSMMUG00000005927) #26 ELF5 (ENSMMUG00000002432) #27 CAT (ENSMMUG00000002429) #28 ABTB2 (ENSMMUG00000058619) #29 NAT10 (ENSMMUG00000021646) #30 CAPRIN1 (ENSMMUG00000021643) #31 ENSMMUG00000041821 LMO2 (ENSMMUG00000007633) #32 FBXO3 (ENSMMUG00000006063) #33 CD59 (ENSMMUG00000055602) #34 KIAA1549L (ENSMMUG00000017218) #36 Cercopithecinae_b ANCESTRAL SPECIES 27 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 #7 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Olive baboon MODERN SPECIES 3 OR4B1 (ENSPANG00000047367) OR4X2 (ENSPANG00000002781) LRRC4C (ENSPANG00000011879) #7 ENSPANG00000049659 IFTAP (ENSPANG00000016654) #11 RAG2 (ENSPANG00000010008) #12 RAG1 (ENSPANG00000006541) #13 TRAF6 (ENSPANG00000004746) #14 PRR5L (ENSPANG00000006440) #15 COMMD9 (ENSPANG00000025616) #16 LDLRAD3 (ENSPANG00000019179) #17 ENSPANG00000040429 TRIM44 (ENSPANG00000005449) #19 FJX1 (ENSPANG00000006035) #20 PAMR1 (ENSPANG00000001890) #21 SLC1A2 (ENSPANG00000004847) #22 CD44 (ENSPANG00000023332) #23 ENSPANG00000042989 PDHX (ENSPANG00000008468) #24 APIP (ENSPANG00000020888) #25 EHF (ENSPANG00000024423) #26 ELF5 (ENSPANG00000023357) #27 CAT (ENSPANG00000007496) #28 ABTB2 (ENSPANG00000015046) #29 NAT10 (ENSPANG00000013723) #30 CAPRIN1 (ENSPANG00000006439) #31 LMO2 (ENSPANG00000017076) #32 FBXO3 (ENSPANG00000007978) #33 CD59 (ENSPANG00000003386) #34 C11orf91 (ENSPANG00000038718) #35 KIAA1549L (ENSPANG00000011193) #36 Cercopithecinae_d ANCESTRAL SPECIES 61 ENSGT00390000010991.e ENSGT00910000147254 ENSGT00940000157405 #7 ENSGT00390000009130.a.a.a.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00910000147182 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 Drill MODERN SPECIES 1463 TRIM44 (ENSMLEG00000032388) #19 ENSMLEG00000032999 PAMR1 (ENSMLEG00000011115) #21 SLC1A2 (ENSMLEG00000043724) #22 ENSMLEG00000006190 CD44 (ENSMLEG00000036902) #23 PDHX (ENSMLEG00000032133) #24 APIP (ENSMLEG00000038938) #25 EHF (ENSMLEG00000031177) #26 ELF5 (ENSMLEG00000011534) #27 CAT (ENSMLEG00000036619) #28 ABTB2 (ENSMLEG00000034734) #29 NAT10 (ENSMLEG00000017199) #30 CAPRIN1 (ENSMLEG00000043851) #31 ENSMLEG00000037419 LMO2 (ENSMLEG00000029197) #32 FBXO3 (ENSMLEG00000041134) #33 CD59 (ENSMLEG00000037740) #34 KIAA1549L (ENSMLEG00000027768) #36 Sooty mangabey MODERN SPECIES 660 ENSCATG00000036798 ENSCATG00000037205 LRRC4C (ENSCATG00000021681) #7 ENSCATG00000007177 IFTAP (ENSCATG00000030440) #11 RAG2 (ENSCATG00000018432) #12 RAG1 (ENSCATG00000033061) #13 TRAF6 (ENSCATG00000030633) #14 PRR5L (ENSCATG00000036147) #15 COMMD9 (ENSCATG00000032393) #16 LDLRAD3 (ENSCATG00000035471) #17 ENSCATG00000029956 TRIM44 (ENSCATG00000041732) #19 FJX1 (ENSCATG00000019714) #20 PAMR1 (ENSCATG00000037871) #21 SLC1A2 (ENSCATG00000042113) #22 ENSCATG00000032365 CD44 (ENSCATG00000038723) #23 PDHX (ENSCATG00000031099) #24 APIP (ENSCATG00000032616) #25 EHF (ENSCATG00000035479) #26 ELF5 (ENSCATG00000039615) #27 CAT (ENSCATG00000034200) #28 ABTB2 (ENSCATG00000039861) #29 NAT10 (ENSCATG00000037820) #30 CAPRIN1 (ENSCATG00000038427) #31 LMO2 (ENSCATG00000035418) #32 FBXO3 (ENSCATG00000043919) #33 C11orf91 (ENSCATG00000038135) #35 KIAA1549L (ENSCATG00000036464) #36 HIPK3 (ENSCATG00000037808) #37 Rhinopithecus ANCESTRAL SPECIES 111 ENSGT00390000009130.a.a.a.a.a.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.s #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 ENSGT00390000006758.b Golden snub-nosed monkey MODERN SPECIES 3270 ENSRROG00000017023 ENSRROG00000007760 IFTAP (ENSRROG00000029267) #11 RAG2 (ENSRROG00000003972) #12 RAG1 (ENSRROG00000026777) #13 TRAF6 (ENSRROG00000042849) #14 PRR5L (ENSRROG00000042840) #15 COMMD9 (ENSRROG00000036538) #16 LDLRAD3 (ENSRROG00000032454) #17 ENSRROG00000035939 TRIM44 (ENSRROG00000039062) #19 PAMR1 (ENSRROG00000028590) #21 SLC1A2 (ENSRROG00000030103) #22 CD44 (ENSRROG00000040965) #23 PDHX (ENSRROG00000045075) #24 APIP (ENSRROG00000044872) #25 EHF (ENSRROG00000038817) #26 ELF5 (ENSRROG00000031978) #27 CAT (ENSRROG00000002648) #28 ABTB2 (ENSRROG00000035702) #29 NAT10 (ENSRROG00000011811) #30 CAPRIN1 (ENSRROG00000039325) #31 LMO2 (ENSRROG00000042167) #32 FBXO3 (ENSRROG00000040121) #33 CD59 (ENSRROG00000024041) #34 KIAA1549L (ENSRROG00000039380) #36 HIPK3 (ENSRROG00000043050) #37 CSTF3 (ENSRROG00000043450) Black snub-nosed monkey MODERN SPECIES 1475 TRIM44 (ENSRBIG00000030012) #19 PAMR1 (ENSRBIG00000038564) #21 SLC1A2 (ENSRBIG00000031455) #22 CD44 (ENSRBIG00000035084) #23 PDHX (ENSRBIG00000040537) #24 APIP (ENSRBIG00000027526) #25 EHF (ENSRBIG00000026520) #26 ELF5 (ENSRBIG00000031645) #27 CAT (ENSRBIG00000000541) #28 ABTB2 (ENSRBIG00000038271) #29 NAT10 (ENSRBIG00000028922) #30 CAPRIN1 (ENSRBIG00000028278) #31 ENSRBIG00000022126 LMO2 (ENSRBIG00000028113) #32 FBXO3 (ENSRBIG00000024490) #33 CD59 (ENSRBIG00000013725) #34 KIAA1549L (ENSRBIG00000040921) #36 HIPK3 (ENSRBIG00000028852) #37 Platyrrhini ANCESTRAL SPECIES 3 ENSGT00940000154860 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00910000147087 ENSGT00530000063822.a.a #23 ENSGT00940000156046.e #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.h #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Mas night monkey MODERN SPECIES 349 HSD17B12 (ENSANAG00000001245) TTC17 (ENSANAG00000033544) API5 (ENSANAG00000035535) LRRC4C (ENSANAG00000002444) #7 IFTAP (ENSANAG00000034158) #11 RAG2 (ENSANAG00000020159) #12 RAG1 (ENSANAG00000020150) #13 TRAF6 (ENSANAG00000027972) #14 PRR5L (ENSANAG00000020046) #15 COMMD9 (ENSANAG00000022827) #16 ENSANAG00000026763 LDLRAD3 (ENSANAG00000037192) #17 ENSANAG00000030501 TRIM44 (ENSANAG00000014196) #19 PAMR1 (ENSANAG00000029143) #21 SLC1A2 (ENSANAG00000020434) #22 ENSANAG00000025347 CD44 (ENSANAG00000029878) #23 ENSANAG00000015605 #24 APIP (ENSANAG00000038438) #25 EHF (ENSANAG00000024254) #26 ELF5 (ENSANAG00000016910) #27 CAT (ENSANAG00000030970) #28 ABTB2 (ENSANAG00000030512) #29 NAT10 (ENSANAG00000026850) #30 CAPRIN1 (ENSANAG00000032811) #31 LMO2 (ENSANAG00000023079) #32 ENSANAG00000037514 FBXO3 (ENSANAG00000026400) #33 CD59 (ENSANAG00000033427) #34 C11orf91 (ENSANAG00000035705) #35 Cebidae ANCESTRAL SPECIES ENSGT00940000154860 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046.e #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.h #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Marmoset MODERN SPECIES 2 ENSCJAG00000071318 ENSCJAG00000086386 ENSCJAG00000056043 ENSCJAG00000069702 RAG2 (ENSCJAG00000011084) #12 RAG1 (ENSCJAG00000039101) #13 TRAF6 (ENSCJAG00000011070) #14 PRR5L (ENSCJAG00000044403) #15 COMMD9 (ENSCJAG00000011032) #16 LDLRAD3 (ENSCJAG00000011017) #17 TRIM44 (ENSCJAG00000011000) #19 ENSCJAG00000075599 ENSCJAG00000082010 FJX1 (ENSCJAG00000010998) #20 PAMR1 (ENSCJAG00000010977) #21 SLC1A2 (ENSCJAG00000010952) #22 CD44 (ENSCJAG00000010912) #23 PDHX (ENSCJAG00000010888) #24 APIP (ENSCJAG00000065396) #25 EHF (ENSCJAG00000010810) #26 ELF5 (ENSCJAG00000040519) #27 CAT (ENSCJAG00000010742) #28 ENSCJAG00000079093 ENSCJAG00000070732 ABTB2 (ENSCJAG00000010711) #29 NAT10 (ENSCJAG00000010585) #30 CAPRIN1 (ENSCJAG00000010542) #31 ENSCJAG00000076270 LMO2 (ENSCJAG00000010531) #32 FBXO3 (ENSCJAG00000010459) #33 CD59 (ENSCJAG00000043097) #34 Cebidae_a ANCESTRAL SPECIES 10 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00950000183087.A.b.a ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046.e #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.h #31 ENSGT00940000160199 #32 ENSGT00460000041594.e.b ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Bolivian squirrel monkey MODERN SPECIES 42 TTC17 (ENSSBOG00000027019) API5 (ENSSBOG00000021448) ENSSBOG00000029311 ENSSBOG00000031892 LRRC4C (ENSSBOG00000018653) #7 ENSSBOG00000033020 IFTAP (ENSSBOG00000025933) #11 RAG2 (ENSSBOG00000017623) #12 RAG1 (ENSSBOG00000016673) #13 TRAF6 (ENSSBOG00000028498) #14 PRR5L (ENSSBOG00000033062) #15 COMMD9 (ENSSBOG00000023383) #16 LDLRAD3 (ENSSBOG00000024561) #17 TRIM44 (ENSSBOG00000019501) #19 PAMR1 (ENSSBOG00000034633) #21 SLC1A2 (ENSSBOG00000031126) #22 CD44 (ENSSBOG00000020740) #23 ENSSBOG00000007623 #24 APIP (ENSSBOG00000027533) #25 EHF (ENSSBOG00000007293) #26 ELF5 (ENSSBOG00000025536) #27 CAT (ENSSBOG00000035672) #28 ABTB2 (ENSSBOG00000019878) #29 NAT10 (ENSSBOG00000023643) #30 CAPRIN1 (ENSSBOG00000029900) #31 LMO2 (ENSSBOG00000019669) #32 ENSSBOG00000033446 FBXO3 (ENSSBOG00000023671) #33 CD59 (ENSSBOG00000022436) #34 C11orf91 (ENSSBOG00000020764) #35 KIAA1549L (ENSSBOG00000033426) #36 Capuchin MODERN SPECIES 66 IFTAP (ENSCCAG00000029617) #11 RAG2 (ENSCCAG00000004467) #12 RAG1 (ENSCCAG00000020121) #13 TRAF6 (ENSCCAG00000009055) #14 PRR5L (ENSCCAG00000026981) #15 COMMD9 (ENSCCAG00000025370) #16 LDLRAD3 (ENSCCAG00000025416) #17 TRIM44 (ENSCCAG00000023918) #19 PAMR1 (ENSCCAG00000026688) #21 SLC1A2 (ENSCCAG00000023288) #22 CD44 (ENSCCAG00000027898) #23 ENSCCAG00000026050 #24 APIP (ENSCCAG00000034199) #25 EHF (ENSCCAG00000024416) #26 ELF5 (ENSCCAG00000037404) #27 CAT (ENSCCAG00000033204) #28 ABTB2 (ENSCCAG00000036795) #29 NAT10 (ENSCCAG00000003512) #30 CAPRIN1 (ENSCCAG00000020172) #31 LMO2 (ENSCCAG00000025912) #32 ENSCCAG00000031196 FBXO3 (ENSCCAG00000019477) #33 CD59 (ENSCCAG00000021398) #34 KIAA1549L (ENSCCAG00000036428) #36 RFWD3 (ENSCCAG00000023598) Euarchontoglires_A ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Tree shrew MODERN SPECIES 348 ENSTBEG00000004233 #22 Glires ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Lagomorpha ANCESTRAL SPECIES 4 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT01030000240070 ENSGT00530000063472.b.b.a.b #36 Rabbit MODERN SPECIES LRRC4C (ENSOCUG00000017587) #7 ENSOCUG00000028119 ENSOCUG00000031380 ENSOCUG00000028011 ENSOCUG00000038153 IFTAP (ENSOCUG00000006998) #11 RAG2 (ENSOCUG00000006995) #12 RAG1 (ENSOCUG00000006989) #13 TRAF6 (ENSOCUG00000012011) #14 PRR5L (ENSOCUG00000012007) #15 COMMD9 (ENSOCUG00000015674) #16 LDLRAD3 (ENSOCUG00000026068) #17 TRIM44 (ENSOCUG00000003818) #19 FJX1 (ENSOCUG00000026770) #20 PAMR1 (ENSOCUG00000000721) #21 SLC1A2 (ENSOCUG00000000718) #22 CD44 (ENSOCUG00000000715) #23 PDHX (ENSOCUG00000008004) #24 APIP (ENSOCUG00000021141) #25 EHF (ENSOCUG00000010261) #26 ELF5 (ENSOCUG00000014207) #27 CAT (ENSOCUG00000014198) #28 ABTB2 (ENSOCUG00000001405) #29 NAT10 (ENSOCUG00000001398) #30 CAPRIN1 (ENSOCUG00000024887) #31 LMO2 (ENSOCUG00000001532) #32 ENSOCUG00000014606 #33 ENSOCUG00000038151 #33 ENSOCUG00000014601 #34 ENSOCUG00000030857 C11orf91 (ENSOCUG00000025307) #35 Pika MODERN SPECIES 4741 PAMR1 (ENSOPRG00000010765) #21 SLC1A2 (ENSOPRG00000010743) #22 CD44 (ENSOPRG00000010721) #23 ENSOPRG00000019159 Rodentia ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Rodentia_B ANCESTRAL SPECIES 5 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Kangaroo rat MODERN SPECIES 365 Lrrc4c (ENSDORG00000023251) #7 Iftap (ENSDORG00000010963) #11 Rag2 (ENSDORG00000027476) #12 Rag1 (ENSDORG00000028200) #13 Traf6 (ENSDORG00000028957) #14 Prr5l (ENSDORG00000023439) #15 ENSDORG00000023878 Commd9 (ENSDORG00000002082) #16 Ldlrad3 (ENSDORG00000027771) #17 Trim44 (ENSDORG00000003756) #19 Fjx1 (ENSDORG00000028183) #20 Pamr1 (ENSDORG00000009499) #21 ENSDORG00000023527 Slc1a2 (ENSDORG00000014749) #22 ENSDORG00000014748 #23 Pdhx (ENSDORG00000006342) #24 Apip (ENSDORG00000006346) #25 Ehf (ENSDORG00000007642) #26 Elf5 (ENSDORG00000029279) #27 Cat (ENSDORG00000007636) #28 Abtb2 (ENSDORG00000006572) #29 Nat10 (ENSDORG00000006567) #30 Caprin1 (ENSDORG00000006566) #31 Lmo2 (ENSDORG00000010406) #32 Fbxo3 (ENSDORG00000008866) #33 ENSDORG00000026857 A930018P22Rik (ENSDORG00000008868) #35 ENSDORG00000024985 D430041D05Rik (ENSDORG00000012272) #36 Myomorpha ANCESTRAL SPECIES 4 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 79 ENSJJAG00000011645 Spint1 (ENSJJAG00000014215) Rhov (ENSJJAG00000005067) Vps18 (ENSJJAG00000015321) Dll4 (ENSJJAG00000019587) Ino80 (ENSJJAG00000016166) ENSJJAG00000000316 ENSJJAG00000005674 ENSJJAG00000018584 ENSJJAG00000004045 Traf6 (ENSJJAG00000019637) #14 ENSJJAG00000024040 #15 ENSJJAG00000009576 #16 Pamr1 (ENSJJAG00000002115) #21 ENSJJAG00000012579 #22 ENSJJAG00000017687 #22 ENSJJAG00000024031 #23 Pdhx (ENSJJAG00000007859) #24 ENSJJAG00000011063 #25 Ehf (ENSJJAG00000023839) #26 Elf5 (ENSJJAG00000003357) #27 Cat (ENSJJAG00000012897) #28 Abtb2 (ENSJJAG00000014143) #29 Nat10 (ENSJJAG00000023042) #30 Lmo2 (ENSJJAG00000020848) #32 Fbxo3 (ENSJJAG00000022887) #33 D430041D05Rik (ENSJJAG00000019415) #36 Hipk3 (ENSJJAG00000000303) #37 Cstf3 (ENSJJAG00000018430) Tcp11l1 (ENSJJAG00000002396) Ccdc73 (ENSJJAG00000021731) Lesser Egyptian jerboa MODERN SPECIES 79 Zfyve19 (ENSJJAG00000022792) ENSJJAG00000011645 Spint1 (ENSJJAG00000014215) Rhov (ENSJJAG00000005067) Vps18 (ENSJJAG00000015321) Dll4 (ENSJJAG00000019587) Ino80 (ENSJJAG00000016166) ENSJJAG00000000316 ENSJJAG00000005674 ENSJJAG00000018584 ENSJJAG00000004045 Traf6 (ENSJJAG00000019637) #14 ENSJJAG00000024040 #15 ENSJJAG00000009576 #16 Pamr1 (ENSJJAG00000002115) #21 ENSJJAG00000012579 #22 ENSJJAG00000017687 #22 ENSJJAG00000024031 #23 Pdhx (ENSJJAG00000007859) #24 ENSJJAG00000011063 #25 Ehf (ENSJJAG00000023839) #26 Elf5 (ENSJJAG00000003357) #27 Cat (ENSJJAG00000012897) #28 Abtb2 (ENSJJAG00000014143) #29 Nat10 (ENSJJAG00000023042) #30 Lmo2 (ENSJJAG00000020848) #32 Fbxo3 (ENSJJAG00000022887) #33 D430041D05Rik (ENSJJAG00000019415) #36 Hipk3 (ENSJJAG00000000303) #37 Cstf3 (ENSJJAG00000018430) Tcp11l1 (ENSJJAG00000002396) Muroidea ANCESTRAL SPECIES 2 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Muroidea_A ANCESTRAL SPECIES 2 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Cricetidae ANCESTRAL SPECIES 5 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Cricetidae_B ANCESTRAL SPECIES 34 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Northern American deer mouse MODERN SPECIES 17 Api5 (ENSPEMG00000019874) ENSPEMG00000012394 Lrrc4c (ENSPEMG00000012198) #7 ENSPEMG00000025399 ENSPEMG00000028280 Iftap (ENSPEMG00000007125) #11 Rag2 (ENSPEMG00000018407) #12 Rag1 (ENSPEMG00000018077) #13 Traf6 (ENSPEMG00000015556) #14 Prr5l (ENSPEMG00000014248) #15 Commd9 (ENSPEMG00000011457) #16 Ldlrad3 (ENSPEMG00000010990) #17 Trim44 (ENSPEMG00000030265) #19 Fjx1 (ENSPEMG00000005586) #20 Pamr1 (ENSPEMG00000012941) #21 Slc1a2 (ENSPEMG00000010827) #22 Cd44 (ENSPEMG00000020598) #23 Pdhx (ENSPEMG00000015465) #24 Apip (ENSPEMG00000012212) #25 Ehf (ENSPEMG00000016561) #26 ENSPEMG00000015756 Elf5 (ENSPEMG00000004489) #27 Cat (ENSPEMG00000005139) #28 Abtb2 (ENSPEMG00000014140) #29 Nat10 (ENSPEMG00000009451) #30 Caprin1 (ENSPEMG00000009832) #31 Lmo2 (ENSPEMG00000000075) #32 Fbxo3 (ENSPEMG00000018420) #33 ENSPEMG00000026456 #34 A930018P22Rik (ENSPEMG00000000170) #35 D430041D05Rik (ENSPEMG00000020969) #36 Prairie vole MODERN SPECIES 81 ENSMOCG00000017344 Lrrc4c (ENSMOCG00000005308) #7 ENSMOCG00000016690 ENSMOCG00000016731 ENSMOCG00000001289 Iftap (ENSMOCG00000016114) #11 Rag2 (ENSMOCG00000011926) #12 Rag1 (ENSMOCG00000008467) #13 Traf6 (ENSMOCG00000016757) #14 Prr5l (ENSMOCG00000020211) #15 Commd9 (ENSMOCG00000021561) #16 Ldlrad3 (ENSMOCG00000000619) #17 Trim44 (ENSMOCG00000006259) #19 Fjx1 (ENSMOCG00000004525) #20 Pamr1 (ENSMOCG00000003031) #21 Slc1a2 (ENSMOCG00000022434) #22 Cd44 (ENSMOCG00000021544) #23 Pdhx (ENSMOCG00000021084) #24 Apip (ENSMOCG00000015378) #25 Ehf (ENSMOCG00000003108) #26 Elf5 (ENSMOCG00000021785) #27 Cat (ENSMOCG00000019198) #28 Abtb2 (ENSMOCG00000013912) #29 Nat10 (ENSMOCG00000021454) #30 Caprin1 (ENSMOCG00000020128) #31 ENSMOCG00000018784 Lmo2 (ENSMOCG00000003531) #32 Fbxo3 (ENSMOCG00000022595) #33 ENSMOCG00000003094 #34 A930018P22Rik (ENSMOCG00000013797) #35 D430041D05Rik (ENSMOCG00000003074) #36 Cricetinae ANCESTRAL SPECIES 1 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00550000074784.a.b ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Golden Hamster MODERN SPECIES 618 Ttc17 (ENSMAUG00000010822) ENSMAUG00000008950 Lrrc4c (ENSMAUG00000008203) #7 Iftap (ENSMAUG00000010224) #11 Rag2 (ENSMAUG00000010934) #12 Rag1 (ENSMAUG00000010819) #13 Traf6 (ENSMAUG00000005756) #14 Prr5l (ENSMAUG00000004032) #15 Commd9 (ENSMAUG00000003287) #16 Ldlrad3 (ENSMAUG00000009660) #17 ENSMAUG00000010163 ENSMAUG00000010071 Trim44 (ENSMAUG00000008730) #19 Fjx1 (ENSMAUG00000002426) #20 Pamr1 (ENSMAUG00000007447) #21 Slc1a2 (ENSMAUG00000008324) #22 Cd44 (ENSMAUG00000004546) #23 Pdhx (ENSMAUG00000002883) #24 Apip (ENSMAUG00000001671) #25 Ehf (ENSMAUG00000004776) #26 Elf5 (ENSMAUG00000003650) #27 Cat (ENSMAUG00000012493) #28 Abtb2 (ENSMAUG00000011208) #29 ENSMAUG00000010653 #30 ENSMAUG00000010029 #30 Caprin1 (ENSMAUG00000008906) #31 Lmo2 (ENSMAUG00000006848) #32 ENSMAUG00000005850 #33 ENSMAUG00000003722 A930018P22Rik (ENSMAUG00000002950) #35 D430041D05Rik (ENSMAUG00000010328) #36 Chinese hamster chok1gshd MODERN SPECIES 188 Lrrc4c (ENSCGRG00001011183) #7 ENSCGRG00001011370 ENSCGRG00001002351 ENSCGRG00001003416 Iftap (ENSCGRG00001020974) #11 Rag2 (ENSCGRG00001011151) #12 Rag1 (ENSCGRG00001002046) #13 Traf6 (ENSCGRG00001019275) #14 Prr5l (ENSCGRG00001018581) #15 ENSCGRG00001017501 #16 Ldlrad3 (ENSCGRG00001024912) #17 ENSCGRG00001024835 Trim44 (ENSCGRG00001024631) #19 Fjx1 (ENSCGRG00001010732) #20 Pamr1 (ENSCGRG00001023148) #21 Slc1a2 (ENSCGRG00001023537) #22 Cd44 (ENSCGRG00001022042) #23 Pdhx (ENSCGRG00001020048) #24 APIP (ENSCGRG00001019435) #25 Ehf (ENSCGRG00001018872) #26 Elf5 (ENSCGRG00001017703) #27 Cat (ENSCGRG00001022758) #28 Abtb2 (ENSCGRG00001022262) #29 NAT10 (ENSCGRG00001010534) #30 Caprin1 (ENSCGRG00001006383) #31 Lmo2 (ENSCGRG00001003942) #32 ENSCGRG00001002101 Fbxo3 (ENSCGRG00001019997) #33 ENSCGRG00001019416 #34 A930018P22Rik (ENSCGRG00001018837) #35 D430041D05Rik (ENSCGRG00001017776) #36 Murinae ANCESTRAL SPECIES 1 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Mus ANCESTRAL SPECIES 1 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309.j #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Mus_A ANCESTRAL SPECIES ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00860000136352 ENSGT00940000153571.b #33 ENSGT00390000016309.j #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Mus_B ANCESTRAL SPECIES 1 ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00860000136352 ENSGT00940000153571.b #33 ENSGT00390000016309.j #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Mouse MODERN SPECIES 11 Alkbh3 (ENSMUSG00000040174) Hsd17b12 (ENSMUSG00000027195) Ttc17 (ENSMUSG00000027194) Api5 (ENSMUSG00000027193) Lrrc4c (ENSMUSG00000050587) #7 Iftap (ENSMUSG00000027165) #11 Rag2 (ENSMUSG00000032864) #12 Rag1 (ENSMUSG00000061311) #13 Traf6 (ENSMUSG00000027164) #14 Prr5l (ENSMUSG00000032841) #15 Commd9 (ENSMUSG00000027163) #16 Ldlrad3 (ENSMUSG00000048058) #17 Trim44 (ENSMUSG00000027189) #19 Fjx1 (ENSMUSG00000075012) #20 Pamr1 (ENSMUSG00000027188) #21 Slc1a2 (ENSMUSG00000005089) #22 Cd44 (ENSMUSG00000005087) #23 Pdhx (ENSMUSG00000010914) #24 Apip (ENSMUSG00000010911) #25 Ehf (ENSMUSG00000012350) #26 Elf5 (ENSMUSG00000027186) #27 Cat (ENSMUSG00000027187) #28 Abtb2 (ENSMUSG00000032724) #29 Nat10 (ENSMUSG00000027185) #30 Caprin1 (ENSMUSG00000027184) #31 Lmo2 (ENSMUSG00000032698) #32 Fbxo3 (ENSMUSG00000027180) #33 Cd59b (ENSMUSG00000068686) #34 Cd59a (ENSMUSG00000032679) #34 A930018P22Rik (ENSMUSG00000032671) #35 D430041D05Rik (ENSMUSG00000068373) #36 Mus_C ANCESTRAL SPECIES ENSGT00940000157226.f ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00860000136352 ENSGT00940000153571.b #33 ENSGT00390000016309.j #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Steppe mouse MODERN SPECIES 12 Iftap (ENSMSIG00000004799) #11 Rag2 (ENSMSIG00000004837) #12 Rag1 (ENSMSIG00000004846) #13 Traf6 (ENSMSIG00000004857) #14 Prr5l (ENSMSIG00000004870) #15 Commd9 (ENSMSIG00000004921) #16 Ldlrad3 (ENSMSIG00000004965) #17 ENSMSIG00000004991 Trim44 (ENSMSIG00000005008) #19 Fjx1 (ENSMSIG00000005059) #20 Pamr1 (ENSMSIG00000005073) #21 Slc1a2 (ENSMSIG00000005100) #22 Cd44 (ENSMSIG00000005261) #23 Pdhx (ENSMSIG00000006094) #24 ENSMSIG00000006147 #25 Ehf (ENSMSIG00000006198) #26 Elf5 (ENSMSIG00000006297) #27 Cat (ENSMSIG00000006347) #28 Abtb2 (ENSMSIG00000006424) #29 ENSMSIG00000006529 Nat10 (ENSMSIG00000006539) #30 Caprin1 (ENSMSIG00000006606) #31 Lmo2 (ENSMSIG00000006713) #32 ENSMSIG00000006746 Fbxo3 (ENSMSIG00000006767) #33 spretus MODERN SPECIES 11 Alkbh3 (MGP_SPRETEiJ_G0024905) Hsd17b12 (MGP_SPRETEiJ_G0024906) Ttc17 (MGP_SPRETEiJ_G0024907) Api5 (MGP_SPRETEiJ_G0024908) Lrrc4c (MGP_SPRETEiJ_G0024909) #7 Iftap (MGP_SPRETEiJ_G0024910) #11 Rag2 (MGP_SPRETEiJ_G0024911) #12 Rag1 (MGP_SPRETEiJ_G0024912) #13 Traf6 (MGP_SPRETEiJ_G0024913) #14 Prr5l (MGP_SPRETEiJ_G0024914) #15 Commd9 (MGP_SPRETEiJ_G0024915) #16 Ldlrad3 (MGP_SPRETEiJ_G0024916) #17 Trim44 (MGP_SPRETEiJ_G0024917) #19 Fjx1 (MGP_SPRETEiJ_G0024918) #20 Pamr1 (MGP_SPRETEiJ_G0024919) #21 Slc1a2 (MGP_SPRETEiJ_G0024920) #22 Cd44 (MGP_SPRETEiJ_G0024921) #23 Pdhx (MGP_SPRETEiJ_G0024922) #24 Apip (MGP_SPRETEiJ_G0024923) #25 Ehf (MGP_SPRETEiJ_G0024924) #26 Elf5 (MGP_SPRETEiJ_G0024925) #27 Cat (MGP_SPRETEiJ_G0024926) #28 Abtb2 (MGP_SPRETEiJ_G0024927) #29 Nat10 (MGP_SPRETEiJ_G0024928) #30 Caprin1 (MGP_SPRETEiJ_G0024929) #31 Lmo2 (MGP_SPRETEiJ_G0024930) #32 MGP_SPRETEiJ_G0024931 Fbxo3 (MGP_SPRETEiJ_G0024932) #33 Cd59a (MGP_SPRETEiJ_G0024933) #34 A930018P22Rik (MGP_SPRETEiJ_G0024935) #35 D430041D05Rik (MGP_SPRETEiJ_G0024936) #36 Ryukyu mouse MODERN SPECIES 11 Alkbh3 (MGP_CAROLIEiJ_G0023995) MGP_CAROLIEiJ_G0023996 Ttc17 (MGP_CAROLIEiJ_G0023997) Api5 (MGP_CAROLIEiJ_G0023998) Lrrc4c (MGP_CAROLIEiJ_G0023999) #7 Iftap (MGP_CAROLIEiJ_G0024000) #11 Rag2 (MGP_CAROLIEiJ_G0024001) #12 Rag1 (MGP_CAROLIEiJ_G0024002) #13 Traf6 (MGP_CAROLIEiJ_G0024003) #14 Prr5l (MGP_CAROLIEiJ_G0024004) #15 Commd9 (MGP_CAROLIEiJ_G0024005) #16 Ldlrad3 (MGP_CAROLIEiJ_G0024006) #17 Trim44 (MGP_CAROLIEiJ_G0024007) #19 Fjx1 (MGP_CAROLIEiJ_G0024008) #20 Pamr1 (MGP_CAROLIEiJ_G0024009) #21 Slc1a2 (MGP_CAROLIEiJ_G0024010) #22 Cd44 (MGP_CAROLIEiJ_G0024011) #23 Pdhx (MGP_CAROLIEiJ_G0024012) #24 Apip (MGP_CAROLIEiJ_G0024013) #25 Ehf (MGP_CAROLIEiJ_G0024014) #26 Elf5 (MGP_CAROLIEiJ_G0024015) #27 Cat (MGP_CAROLIEiJ_G0024016) #28 Abtb2 (MGP_CAROLIEiJ_G0024017) #29 MGP_CAROLIEiJ_G0024018 #30 Caprin1 (MGP_CAROLIEiJ_G0024019) #31 Lmo2 (MGP_CAROLIEiJ_G0024020) #32 MGP_CAROLIEiJ_G0024021 Fbxo3 (MGP_CAROLIEiJ_G0024022) #33 A930018P22Rik (MGP_CAROLIEiJ_G0024023) #35 MGP_CAROLIEiJ_G0024024 #36 Hipk3 (MGP_CAROLIEiJ_G0024025) #37 Shrew mouse MODERN SPECIES 16 Alkbh3 (MGP_PahariEiJ_G0025431) Hsd17b12 (MGP_PahariEiJ_G0025432) Ttc17 (MGP_PahariEiJ_G0025433) Api5 (MGP_PahariEiJ_G0025434) Lrrc4c (MGP_PahariEiJ_G0025435) #7 MGP_PahariEiJ_G0025436 #11 Rag2 (MGP_PahariEiJ_G0025437) #12 Rag1 (MGP_PahariEiJ_G0025438) #13 Traf6 (MGP_PahariEiJ_G0025439) #14 Prr5l (MGP_PahariEiJ_G0025440) #15 Commd9 (MGP_PahariEiJ_G0025441) #16 Ldlrad3 (MGP_PahariEiJ_G0025442) #17 Trim44 (MGP_PahariEiJ_G0025443) #19 Fjx1 (MGP_PahariEiJ_G0025444) #20 Pamr1 (MGP_PahariEiJ_G0025445) #21 Slc1a2 (MGP_PahariEiJ_G0025446) #22 Cd44 (MGP_PahariEiJ_G0025447) #23 Pdhx (MGP_PahariEiJ_G0025448) #24 Apip (MGP_PahariEiJ_G0025449) #25 Ehf (MGP_PahariEiJ_G0025450) #26 Elf5 (MGP_PahariEiJ_G0025451) #27 Cat (MGP_PahariEiJ_G0025452) #28 Abtb2 (MGP_PahariEiJ_G0025453) #29 Nat10 (MGP_PahariEiJ_G0025454) #30 Caprin1 (MGP_PahariEiJ_G0025455) #31 Lmo2 (MGP_PahariEiJ_G0025456) #32 MGP_PahariEiJ_G0025457 Fbxo3 (MGP_PahariEiJ_G0025458) #33 MGP_PahariEiJ_G0025459 #34 MGP_PahariEiJ_G0025460 #34 A930018P22Rik (MGP_PahariEiJ_G0025461) #35 Rat MODERN SPECIES 13 ENSRNOG00000066316 Lrrc4c (ENSRNOG00000029798) #7 AABR07053065.1 (ENSRNOG00000004381) LOC499843 (ENSRNOG00000032177) Iftap (ENSRNOG00000037567) #11 Rag2 (ENSRNOG00000004623) #12 Rag1 (ENSRNOG00000004630) #13 Traf6 (ENSRNOG00000004639) #14 Prr5l (ENSRNOG00000004666) #15 Commd9 (ENSRNOG00000004755) #16 Ldlrad3 (ENSRNOG00000058157) #17 Rpl21 (ENSRNOG00000069969) Trim44 (ENSRNOG00000005191) #19 Fjx1 (ENSRNOG00000005347) #20 Pamr1 (ENSRNOG00000005348) #21 Slc1a2 (ENSRNOG00000005479) #22 Cd44 (ENSRNOG00000006094) #23 Pdhx (ENSRNOG00000006947) #24 Apip (ENSRNOG00000007446) #25 Ehf (ENSRNOG00000007484) #26 Elf5 (ENSRNOG00000008282) #27 Cat (ENSRNOG00000008364) #28 Abtb2 (ENSRNOG00000008510) #29 Nat10 (ENSRNOG00000008663) #30 Caprin1 (ENSRNOG00000009152) #31 ENSRNOG00000063191 Lmo2 (ENSRNOG00000009401) #32 Fbxo3 (ENSRNOG00000009549) #33 Cd59 (ENSRNOG00000042821) #34 RGD1563222 (ENSRNOG00000010963) #35 LOC100362814 (ENSRNOG00000011132) #36 Upper Galilee mountains blind mole rat MODERN SPECIES 1631 Iftap (ENSNGAG00000018262) #11 Rag2 (ENSNGAG00000015708) #12 Rag1 (ENSNGAG00000006347) #13 Traf6 (ENSNGAG00000018446) #14 ENSNGAG00000011864 Prr5l (ENSNGAG00000021774) #15 Commd9 (ENSNGAG00000015597) #16 Ldlrad3 (ENSNGAG00000004668) #17 Trim44 (ENSNGAG00000014577) #19 Pamr1 (ENSNGAG00000018952) #21 Slc1a2 (ENSNGAG00000011178) #22 Cd44 (ENSNGAG00000019111) #23 Pdhx (ENSNGAG00000023421) #24 Apip (ENSNGAG00000022366) #25 Ehf (ENSNGAG00000022135) #26 Elf5 (ENSNGAG00000021632) #27 Cat (ENSNGAG00000000722) #28 Abtb2 (ENSNGAG00000010042) #29 Nat10 (ENSNGAG00000013486) #30 Caprin1 (ENSNGAG00000006106) #31 Rodentia_A ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Hystricomorpha ANCESTRAL SPECIES 16 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991.p.a ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.b #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Naked mole-rat female MODERN SPECIES 14 LRRC4C (ENSHGLG00000042650) #7 ENSHGLG00000041917 ENSHGLG00000044878 IFTAP (ENSHGLG00000007037) #11 RAG2 (ENSHGLG00000020564) #12 RAG1 (ENSHGLG00000020565) #13 TRAF6 (ENSHGLG00000010513) #14 PRR5L (ENSHGLG00000006197) #15 COMMD9 (ENSHGLG00000039189) #16 LDLRAD3 (ENSHGLG00000009909) #17 ENSHGLG00000035280 TRIM44 (ENSHGLG00000006623) #19 FJX1 (ENSHGLG00000038500) #20 ENSHGLG00000038577 PAMR1 (ENSHGLG00000007733) #21 SLC1A2 (ENSHGLG00000010072) #22 CD44 (ENSHGLG00000011767) #23 ENSHGLG00000047526 ENSHGLG00000040571 ENSHGLG00000010978 #24 APIP (ENSHGLG00000011839) #25 EHF (ENSHGLG00000009758) #26 ELF5 (ENSHGLG00000011019) #27 CAT (ENSHGLG00000011741) #28 ENSHGLG00000016446 #29 NAT10 (ENSHGLG00000016891) #30 ENSHGLG00000018658 #31 ENSHGLG00000009842 ENSHGLG00000006506 ENSHGLG00000035097 ENSHGLG00000048933 #32 Hystricomorpha_a ANCESTRAL SPECIES 12 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991.o ENSGT00940000155035.e.b ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.b #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Guinea pig MODERN SPECIES 92 ENSCPOG00000020978 IFTAP (ENSCPOG00000012798) #11 RAG2 (ENSCPOG00000020441) #12 RAG1 (ENSCPOG00000004516) #13 TRAF6 (ENSCPOG00000004507) #14 PRR5L (ENSCPOG00000030786) #15 COMMD9 (ENSCPOG00000010648) #16 LDLRAD3 (ENSCPOG00000035009) #17 TRIM44 (ENSCPOG00000011263) #19 FJX1 (ENSCPOG00000022249) #20 PAMR1 (ENSCPOG00000007812) #21 SLC1A2 (ENSCPOG00000007801) #22 CD44 (ENSCPOG00000007792) #23 PDHX (ENSCPOG00000003099) #24 APIP (ENSCPOG00000003097) #25 EHF (ENSCPOG00000012596) #26 ELF5 (ENSCPOG00000012593) #27 CAT (ENSCPOG00000012582) #28 ABTB2 (ENSCPOG00000020779) #29 NAT10 (ENSCPOG00000015736) #30 CAPRIN1 (ENSCPOG00000015734) #31 LMO2 (ENSCPOG00000026645) #32 FBXO3 (ENSCPOG00000013568) #33 C11orf91 (ENSCPOG00000023939) #35 KIAA1549L (ENSCPOG00000005350) #36 HIPK3 (ENSCPOG00000002078) #37 CSTF3 (ENSCPOG00000005545) Hystricomorpha_b ANCESTRAL SPECIES 10 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991.o ENSGT00940000155035.e.b ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a.b #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Long-tailed chinchilla MODERN SPECIES 129 API5 (ENSCLAG00000013707) ENSCLAG00000015133 LRRC4C (ENSCLAG00000015479) #7 ENSCLAG00000013706 ENSCLAG00000017889 IFTAP (ENSCLAG00000016504) #11 RAG2 (ENSCLAG00000016493) #12 RAG1 (ENSCLAG00000015510) #13 TRAF6 (ENSCLAG00000015588) #14 PRR5L (ENSCLAG00000015373) #15 COMMD9 (ENSCLAG00000014761) #16 LDLRAD3 (ENSCLAG00000013692) #17 TRIM44 (ENSCLAG00000014212) #19 FJX1 (ENSCLAG00000014978) #20 PAMR1 (ENSCLAG00000014744) #21 SLC1A2 (ENSCLAG00000014237) #22 ENSCLAG00000015376 #23 PDHX (ENSCLAG00000014466) #24 APIP (ENSCLAG00000014703) #25 EHF (ENSCLAG00000017235) #26 ELF5 (ENSCLAG00000013934) #27 CAT (ENSCLAG00000013690) #28 ABTB2 (ENSCLAG00000014834) #29 NAT10 (ENSCLAG00000016692) #30 ENSCLAG00000015468 #31 LMO2 (ENSCLAG00000015594) #32 FBXO3 (ENSCLAG00000015193) #33 ENSCLAG00000014692 #34 C11orf91 (ENSCLAG00000015126) #35 KIAA1549L (ENSCLAG00000014544) #36 HIPK3 (ENSCLAG00000015597) #37 Degu MODERN SPECIES 59 ENSODEG00000020406 ENSODEG00000020370 LRRC4C (ENSODEG00000020475) #7 ENSODEG00000020466 IFTAP (ENSODEG00000016540) #11 RAG2 (ENSODEG00000020447) #12 RAG1 (ENSODEG00000020338) #13 TRAF6 (ENSODEG00000017071) #14 PRR5L (ENSODEG00000016913) #15 COMMD9 (ENSODEG00000017403) #16 LDLRAD3 (ENSODEG00000017384) #17 ENSODEG00000016381 #19 FJX1 (ENSODEG00000016768) #20 ENSODEG00000016254 PAMR1 (ENSODEG00000016795) #21 SLC1A2 (ENSODEG00000016926) #22 ENSODEG00000016446 #23 PDHX (ENSODEG00000016591) #24 ENSODEG00000016598 ENSODEG00000016570 #25 EHF (ENSODEG00000017375) #26 ELF5 (ENSODEG00000016572) #27 CAT (ENSODEG00000016770) #28 ENSODEG00000016618 ABTB2 (ENSODEG00000016924) #29 NAT10 (ENSODEG00000017069) #30 CAPRIN1 (ENSODEG00000016723) #31 ENSODEG00000020372 LMO2 (ENSODEG00000016866) #32 FBXO3 (ENSODEG00000016802) #33 ENSODEG00000016777 Sciuridae ANCESTRAL SPECIES 2 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605.f.a #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Marmotini ANCESTRAL SPECIES 22 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605.f.a #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140.g #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Marmotini_b ANCESTRAL SPECIES 23 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605.f.a #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140.g #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Arctic ground squirrel MODERN SPECIES 10 ALKBH3 (ENSUPAG00010001256) HSD17B12 (ENSUPAG00010001237) ENSUPAG00010001201 API5 (ENSUPAG00010001168) ENSUPAG00010001157 LRRC4C (ENSUPAG00010001136) #7 IFTAP (ENSUPAG00010001086) #11 RAG2 (ENSUPAG00010001080) #12 RAG1 (ENSUPAG00010001077) #13 TRAF6 (ENSUPAG00010001061) #14 PRR5L (ENSUPAG00010001016) #15 COMMD9 (ENSUPAG00010001008) #16 LDLRAD3 (ENSUPAG00010000987) #17 ENSUPAG00010000969 #19 PAMR1 (ENSUPAG00010000955) #21 SLC1A2 (ENSUPAG00010000901) #22 CD44 (ENSUPAG00010000106) #23 PDHX (ENSUPAG00010000084) #24 APIP (ENSUPAG00010000057) #25 EHF (ENSUPAG00010019516) #26 ELF5 (ENSUPAG00010019491) #27 CAT (ENSUPAG00010019472) #28 ABTB2 (ENSUPAG00010019465) #29 NAT10 (ENSUPAG00010019438) #30 CAPRIN1 (ENSUPAG00010019403) #31 LMO2 (ENSUPAG00010019388) #32 FBXO3 (ENSUPAG00010019358) #33 ENSUPAG00010019350 #34 C11orf91 (ENSUPAG00010019347) #35 KIAA1549L (ENSUPAG00010019291) #36 HIPK3 (ENSUPAG00010019217) #37 Squirrel MODERN SPECIES 133 IFTAP (ENSSTOG00000029068) #11 RAG2 (ENSSTOG00000012558) #12 RAG1 (ENSSTOG00000025584) #13 TRAF6 (ENSSTOG00000007303) #14 PRR5L (ENSSTOG00000022180) #15 COMMD9 (ENSSTOG00000007267) #16 LDLRAD3 (ENSSTOG00000007228) #17 TRIM44 (ENSSTOG00000023760) #19 PAMR1 (ENSSTOG00000000826) #21 SLC1A2 (ENSSTOG00000000822) #22 ENSSTOG00000000813 #23 PDHX (ENSSTOG00000004403) #24 APIP (ENSSTOG00000004390) #25 ENSSTOG00000008622 #26 ELF5 (ENSSTOG00000008610) #27 CAT (ENSSTOG00000008595) #28 ABTB2 (ENSSTOG00000001839) #29 ENSSTOG00000001817 #30 CAPRIN1 (ENSSTOG00000006945) #31 LMO2 (ENSSTOG00000024319) #32 FBXO3 (ENSSTOG00000016405) #33 ENSSTOG00000011395 #34 C11orf91 (ENSSTOG00000026942) #35 KIAA1549L (ENSSTOG00000011381) #36 HIPK3 (ENSSTOG00000009714) #37 Alpin marmot MODERN SPECIES 3 ALKBH3 (ENSMMMG00000011630) ENSMMMG00000011626 HSD17B12 (ENSMMMG00000011610) TTC17 (ENSMMMG00000011550) API5 (ENSMMMG00000011483) LRRC4C (ENSMMMG00000011362) #7 IFTAP (ENSMMMG00000011311) #11 RAG2 (ENSMMMG00000011304) #12 RAG1 (ENSMMMG00000011298) #13 TRAF6 (ENSMMMG00000011285) #14 PRR5L (ENSMMMG00000011238) #15 COMMD9 (ENSMMMG00000011235) #16 LDLRAD3 (ENSMMMG00000011216) #17 TRIM44 (ENSMMMG00000011195) #19 PAMR1 (ENSMMMG00000011162) #21 SLC1A2 (ENSMMMG00000011014) #22 CD44 (ENSMMMG00000010323) #23 PDHX (ENSMMMG00000010279) #24 APIP (ENSMMMG00000010262) #25 EHF (ENSMMMG00000010179) #26 ELF5 (ENSMMMG00000010124) #27 CAT (ENSMMMG00000010087) #28 ABTB2 (ENSMMMG00000010060) #29 NAT10 (ENSMMMG00000009992) #30 CAPRIN1 (ENSMMMG00000008164) #31 LMO2 (ENSMMMG00000008095) #32 FBXO3 (ENSMMMG00000008035) #33 ENSMMMG00000008026 #34 C11orf91 (ENSMMMG00000008017) #35 KIAA1549L (ENSMMMG00000007942) #36 HIPK3 (ENSMMMG00000007810) #37 Eurasian red squirrel MODERN SPECIES 2 TTC17 (ENSSVLG00005018176) ENSSVLG00005018298 LRRC4C (ENSSVLG00005018979) #7 ENSSVLG00005019010 ENSSVLG00005019047 #11 RAG2 (ENSSVLG00005019171) #12 RAG1 (ENSSVLG00005019195) #13 TRAF6 (ENSSVLG00005019219) #14 PRR5L (ENSSVLG00005019340) #15 COMMD9 (ENSSVLG00005019522) #16 LDLRAD3 (ENSSVLG00005019672) #17 ENSSVLG00005019782 #19 ENSSVLG00005019851 FJX1 (ENSSVLG00005019889) #20 PAMR1 (ENSSVLG00005019988) #21 SLC1A2 (ENSSVLG00005020571) #22 CD44 (ENSSVLG00005021288) #23 PDHX (ENSSVLG00005021554) #24 APIP (ENSSVLG00005021719) #25 ENSSVLG00005021768 #26 ELF5 (ENSSVLG00005021853) #27 CAT (ENSSVLG00005022137) #28 ENSSVLG00005022214 ABTB2 (ENSSVLG00005004819) #29 NAT10 (ENSSVLG00005004900) #30 CAPRIN1 (ENSSVLG00005004951) #31 LMO2 (ENSSVLG00005005066) #32 FBXO3 (ENSSVLG00005005111) #33 ENSSVLG00005005193 #34 C11orf91 (ENSSVLG00005005211) #35 KIAA1549L (ENSSVLG00005005254) #36 Laurasiatheria ANCESTRAL SPECIES 1 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Eulipotyphla ANCESTRAL SPECIES 976 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 Common shrew MODERN SPECIES 1368 SLC1A2 (ENSSARG00000002833) #22 CD44 (ENSSARG00000002777) #23 Hedgehog MODERN SPECIES 1901 ENSEEUG00000002674 #22 CD44 (ENSEEUG00000002643) #23 Laurasiatheria_a ANCESTRAL SPECIES 1 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Artiodactyla ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Suina ANCESTRAL SPECIES 34 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000156866.db.b ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Chacoan peccary MODERN SPECIES 919 HSD17B12 (ENSCWAG00000021466) TTC17 (ENSCWAG00000021487) API5 (ENSCWAG00000021500) LRRC4C (ENSCWAG00000021529) #7 IFTAP (ENSCWAG00000021537) #11 RAG2 (ENSCWAG00000021551) #12 RAG1 (ENSCWAG00000021554) #13 TRAF6 (ENSCWAG00000021557) #14 PRR5L (ENSCWAG00000021567) #15 COMMD9 (ENSCWAG00000021577) #16 LDLRAD3 (ENSCWAG00000021589) #17 TRIM44 (ENSCWAG00000021596) #19 FJX1 (ENSCWAG00000021598) #20 ENSCWAG00000021601 PAMR1 (ENSCWAG00000021608) #21 SLC1A2 (ENSCWAG00000021640) #22 CD44 (ENSCWAG00000021745) #23 PDHX (ENSCWAG00000021806) #24 APIP (ENSCWAG00000021813) #25 EHF (ENSCWAG00000021818) #26 ELF5 (ENSCWAG00000021834) #27 CAT (ENSCWAG00000021844) #28 ABTB2 (ENSCWAG00000021850) #29 NAT10 (ENSCWAG00000021856) #30 CAPRIN1 (ENSCWAG00000021872) #31 LMO2 (ENSCWAG00000021879) #32 FBXO3 (ENSCWAG00000021882) #33 ENSCWAG00000021889 #34 C11orf91 (ENSCWAG00000021891) #35 KIAA1549L (ENSCWAG00000021895) #36 HIPK3 (ENSCWAG00000021902) #37 Pig MODERN SPECIES 10 ENSSSCG00000044221 IFTAP (ENSSSCG00000035489) #11 RAG2 (ENSSSCG00000034285) #12 RAG1 (ENSSSCG00000026145) #13 TRAF6 (ENSSSCG00000038082) #14 PRR5L (ENSSSCG00000013292) #15 ENSSSCG00000046177 COMMD9 (ENSSSCG00000013293) #16 ENSSSCG00000046114 LDLRAD3 (ENSSSCG00000013294) #17 ENSSSCG00000062228 TRIM44 (ENSSSCG00000013295) #19 FJX1 (ENSSSCG00000025588) #20 ENSSSCG00000040861 PAMR1 (ENSSSCG00000028338) #21 SLC1A2 (ENSSSCG00000013296) #22 CD44 (ENSSSCG00000013297) #23 ENSSSCG00000045027 PDHX (ENSSSCG00000013298) #24 ENSSSCG00000058879 APIP (ENSSSCG00000013299) #25 EHF (ENSSSCG00000013300) #26 ELF5 (ENSSSCG00000013301) #27 CAT (ENSSSCG00000013302) #28 ABTB2 (ENSSSCG00000013303) #29 NAT10 (ENSSSCG00000013304) #30 CAPRIN1 (ENSSSCG00000013305) #31 LMO2 (ENSSSCG00000013307) #32 FBXO3 (ENSSSCG00000013308) #33 ENSSSCG00000024791 #34 C11orf91 (ENSSSCG00000013310) #35 Artiodactyla_a ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Artiodactyla_b ANCESTRAL SPECIES 1 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Cetacea ANCESTRAL SPECIES 4 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309.a #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Odontoceti ANCESTRAL SPECIES 4 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309.a #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Odontoceti_a ANCESTRAL SPECIES 4 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309.a #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Dolphin MODERN SPECIES 3502 PAMR1 (ENSTTRG00000009130) #21 SLC1A2 (ENSTTRG00000009090) #22 CD44 (ENSTTRG00000009009) #23 Odontoceti_b ANCESTRAL SPECIES 4 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309.a #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Vaquita MODERN SPECIES 19 ENSPSNG00000020355 ENSPSNG00000020331 LRRC4C (ENSPSNG00000020317) #7 ENSPSNG00000020308 ENSPSNG00000020284 IFTAP (ENSPSNG00000020245) #11 RAG2 (ENSPSNG00000020227) #12 RAG1 (ENSPSNG00000020212) #13 TRAF6 (ENSPSNG00000020184) #14 PRR5L (ENSPSNG00000020077) #15 COMMD9 (ENSPSNG00000020006) #16 LDLRAD3 (ENSPSNG00000019913) #17 TRIM44 (ENSPSNG00000019844) #19 FJX1 (ENSPSNG00000019820) #20 PAMR1 (ENSPSNG00000019762) #21 SLC1A2 (ENSPSNG00000019163) #22 CD44 (ENSPSNG00000018554) #23 PDHX (ENSPSNG00000018369) #24 APIP (ENSPSNG00000018319) #25 EHF (ENSPSNG00000018151) #26 ELF5 (ENSPSNG00000017789) #27 CAT (ENSPSNG00000017719) #28 ENSPSNG00000017692 ENSPSNG00000017670 #29 NAT10 (ENSPSNG00000017510) #30 CAPRIN1 (ENSPSNG00000017392) #31 LMO2 (ENSPSNG00000017299) #32 FBXO3 (ENSPSNG00000017093) #33 ENSPSNG00000017059 #34 C11orf91 (ENSPSNG00000017031) #35 KIAA1549L (ENSPSNG00000016649) #36 Monodontidae ANCESTRAL SPECIES 2 ENSGT00390000010991 ENSGT00390000016292.i.a.b ENSGT00930000151314.e ENSGT00390000017491.s.b.g ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309.a #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Narwhal MODERN SPECIES 314 TTC17 (ENSMMNG00015016233) API5 (ENSMMNG00015015999) ENSMMNG00015015919 ENSMMNG00015015888 LRRC4C (ENSMMNG00015020998) #7 IFTAP (ENSMMNG00015020977) #11 RAG2 (ENSMMNG00015020969) #12 RAG1 (ENSMMNG00015020958) #13 TRAF6 (ENSMMNG00015020943) #14 PRR5L (ENSMMNG00015020929) #15 COMMD9 (ENSMMNG00015020902) #16 LDLRAD3 (ENSMMNG00015020881) #17 TRIM44 (ENSMMNG00015020855) #19 FJX1 (ENSMMNG00015020839) #20 PAMR1 (ENSMMNG00015020804) #21 SLC1A2 (ENSMMNG00015020614) #22 CD44 (ENSMMNG00015020401) #23 PDHX (ENSMMNG00015020321) #24 APIP (ENSMMNG00015020302) #25 EHF (ENSMMNG00015020278) #26 ELF5 (ENSMMNG00015020227) #27 CAT (ENSMMNG00015020166) #28 ABTB2 (ENSMMNG00015020118) #29 NAT10 (ENSMMNG00015020058) #30 CAPRIN1 (ENSMMNG00015019955) #31 LMO2 (ENSMMNG00015019906) #32 FBXO3 (ENSMMNG00015019842) #33 ENSMMNG00015019816 #34 C11orf91 (ENSMMNG00015019799) #35 KIAA1549L (ENSMMNG00015019709) #36 HIPK3 (ENSMMNG00015019654) #37 Beluga whale MODERN SPECIES 32 ENSDLEG00000012772 ENSDLEG00000012785 ENSDLEG00000012790 LRRC4C (ENSDLEG00000012796) #7 ENSDLEG00000012800 CUNH11orf74 (ENSDLEG00000012812) #11 RAG2 (ENSDLEG00000012831) #12 RAG1 (ENSDLEG00000012836) #13 TRAF6 (ENSDLEG00000012843) #14 PRR5L (ENSDLEG00000012871) #15 COMMD9 (ENSDLEG00000012880) #16 LDLRAD3 (ENSDLEG00000012917) #17 TRIM44 (ENSDLEG00000012932) #19 FJX1 (ENSDLEG00000012954) #20 PAMR1 (ENSDLEG00000012961) #21 SLC1A2 (ENSDLEG00000013009) #22 CD44 (ENSDLEG00000013125) #23 PDHX (ENSDLEG00000013346) #24 APIP (ENSDLEG00000013390) #25 EHF (ENSDLEG00000013404) #26 ELF5 (ENSDLEG00000013416) #27 CAT (ENSDLEG00000013434) #28 ABTB2 (ENSDLEG00000013511) #29 CAPRIN1 (ENSDLEG00000013754) #31 LMO2 (ENSDLEG00000013776) #32 FBXO3 (ENSDLEG00000013801) #33 CD59 (ENSDLEG00000013827) #34 CUNH11orf91 (ENSDLEG00000013835) #35 KIAA1549L (ENSDLEG00000013855) #36 HIPK3 (ENSDLEG00000013963) #37 CSTF3 (ENSDLEG00000014043) Sperm whale MODERN SPECIES 7 ENSPCTG00005013951 ENSPCTG00005013926 ENSPCTG00005013896 LRRC4C (ENSPCTG00005013853) #7 C16H11orf74 (ENSPCTG00005013719) #11 RAG2 (ENSPCTG00005013695) #12 RAG1 (ENSPCTG00005013675) #13 TRAF6 (ENSPCTG00005013602) #14 PRR5L (ENSPCTG00005013353) #15 COMMD9 (ENSPCTG00005013198) #16 LDLRAD3 (ENSPCTG00005013075) #17 TRIM44 (ENSPCTG00005012988) #19 FJX1 (ENSPCTG00005012957) #20 ENSPCTG00005012912 PAMR1 (ENSPCTG00005012627) #21 SLC1A2 (ENSPCTG00005011641) #22 CD44 (ENSPCTG00005011079) #23 PDHX (ENSPCTG00005010927) #24 APIP (ENSPCTG00005010863) #25 EHF (ENSPCTG00005010749) #26 ELF5 (ENSPCTG00005010589) #27 ENSPCTG00005010549 CAT (ENSPCTG00005010499) #28 NAT10 (ENSPCTG00005009740) #30 CAPRIN1 (ENSPCTG00005009279) #31 LMO2 (ENSPCTG00005009182) #32 FBXO3 (ENSPCTG00005009011) #33 CD59 (ENSPCTG00005008976) #34 C16H11orf91 (ENSPCTG00005016629) #35 KIAA1549L (ENSPCTG00005016154) #36 HIPK3 (ENSPCTG00005016025) #37 Blue whale MODERN SPECIES 19 ENSBMSG00010013215 ENSBMSG00010013207 LRRC4C (ENSBMSG00010013196) #7 ENSBMSG00010013188 ENSBMSG00010013173 #11 RAG2 (ENSBMSG00010013164) #12 RAG1 (ENSBMSG00010013155) #13 TRAF6 (ENSBMSG00010013148) #14 PRR5L (ENSBMSG00010013135) #15 COMMD9 (ENSBMSG00010013117) #16 ENSBMSG00010013107 LDLRAD3 (ENSBMSG00010013096) #17 ENSBMSG00010013080 #19 FJX1 (ENSBMSG00010013062) #20 PAMR1 (ENSBMSG00010013047) #21 SLC1A2 (ENSBMSG00010012885) #22 CD44 (ENSBMSG00010012733) #23 ENSBMSG00010012689 PDHX (ENSBMSG00010013305) #24 APIP (ENSBMSG00010013281) #25 EHF (ENSBMSG00010013242) #26 ELF5 (ENSBMSG00010013193) #27 CAT (ENSBMSG00010013166) #28 ABTB2 (ENSBMSG00010013147) #29 NAT10 (ENSBMSG00010013127) #30 CAPRIN1 (ENSBMSG00010013072) #31 LMO2 (ENSBMSG00010013039) #32 ENSBMSG00010013014 #33 ENSBMSG00010012987 #34 C11orf91 (ENSBMSG00010012976) #35 KIAA1549L (ENSBMSG00010012941) #36 Pecora ANCESTRAL SPECIES 7 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Percora_a ANCESTRAL SPECIES 6 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Bovidae ANCESTRAL SPECIES 6 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Caprinae ANCESTRAL SPECIES 6 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT01090000260040.b.b.b.b.b.a ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Rambouillet Sheep MODERN SPECIES 6 ENSOARG00020017753 LRRC4C (ENSOARG00020017737) #7 ENSOARG00020017700 ENSOARG00020017646 ENSOARG00020017606 #11 RAG2 (ENSOARG00020017591) #12 RAG1 (ENSOARG00020017552) #13 TRAF6 (ENSOARG00020017492) #14 PRR5L (ENSOARG00020017314) #15 ENSOARG00020017291 COMMD9 (ENSOARG00020017119) #16 LDLRAD3 (ENSOARG00020016954) #17 TRIM44 (ENSOARG00020016896) #19 FJX1 (ENSOARG00020016861) #20 PAMR1 (ENSOARG00020016385) #21 SLC1A2 (ENSOARG00020014083) #22 PDHX (ENSOARG00020013235) #24 APIP (ENSOARG00020013162) #25 EHF (ENSOARG00020012876) #26 ELF5 (ENSOARG00020012261) #27 CAT (ENSOARG00020012114) #28 ABTB2 (ENSOARG00020011977) #29 NAT10 (ENSOARG00020011594) #30 CAPRIN1 (ENSOARG00020011413) #31 LMO2 (ENSOARG00020011313) #32 FBXO3 (ENSOARG00020011054) #33 CD59 (ENSOARG00020011000) #34 C11orf91 (ENSOARG00020010944) #35 KIAA1549L (ENSOARG00020010529) #36 HIPK3 (ENSOARG00020010376) #37 CSTF3 (ENSOARG00020009771) Goat MODERN SPECIES 6 HSD17B12 (ENSCHIG00000011795) TTC17 (ENSCHIG00000011579) API5 (ENSCHIG00000015343) ENSCHIG00000008612 LRRC4C (ENSCHIG00000005885) #7 ENSCHIG00000010847 #11 RAG2 (ENSCHIG00000009200) #12 RAG1 (ENSCHIG00000013265) #13 TRAF6 (ENSCHIG00000015888) #14 PRR5L (ENSCHIG00000001684) #15 COMMD9 (ENSCHIG00000020550) #16 LDLRAD3 (ENSCHIG00000023229) #17 TRIM44 (ENSCHIG00000013533) #19 FJX1 (ENSCHIG00000001972) #20 PAMR1 (ENSCHIG00000018319) #21 SLC1A2 (ENSCHIG00000026938) #22 CD44 (ENSCHIG00000021491) #23 PDHX (ENSCHIG00000013247) #24 APIP (ENSCHIG00000025799) #25 EHF (ENSCHIG00000010459) #26 ELF5 (ENSCHIG00000014082) #27 CAT (ENSCHIG00000021227) #28 ABTB2 (ENSCHIG00000009432) #29 NAT10 (ENSCHIG00000026081) #30 CAPRIN1 (ENSCHIG00000017561) #31 LMO2 (ENSCHIG00000015059) #32 FBXO3 (ENSCHIG00000016044) #33 ENSCHIG00000003258 #34 C11orf91 (ENSCHIG00000020265) #35 KIAA1549L (ENSCHIG00000010337) #36 HIPK3 (ENSCHIG00000022013) #37 Bovinae ANCESTRAL SPECIES 26 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Bos ANCESTRAL SPECIES 25 ENSGT00390000006196 ENSGT00390000010991 ENSGT00950000185588 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Bos_b ANCESTRAL SPECIES 12 ENSGT00390000006196 ENSGT00390000010991 ENSGT00950000185588 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Hybrid Bos Indicus MODERN SPECIES 6 TTC17 (ENSBIXG00005006754) ENSBIXG00005002693 API5 (ENSBIXG00005016658) LRRC4C (ENSBIXG00005016515) #7 IFTAP (ENSBIXG00005016428) #11 RAG2 (ENSBIXG00005006240) #12 RAG1 (ENSBIXG00005016289) #13 TRAF6 (ENSBIXG00005016273) #14 PRR5L (ENSBIXG00005002585) #15 ENSBIXG00005016155 #16 LDLRAD3 (ENSBIXG00005007025) #17 ENSBIXG00005016028 TRIM44 (ENSBIXG00005016001) #19 FJX1 (ENSBIXG00005015936) #20 PAMR1 (ENSBIXG00005002511) #21 SLC1A2 (ENSBIXG00005015820) #22 CD44 (ENSBIXG00005015299) #23 PDHX (ENSBIXG00005002203) #24 APIP (ENSBIXG00005014975) #25 EHF (ENSBIXG00005002187) #26 ELF5 (ENSBIXG00005007013) #27 CAT (ENSBIXG00005005408) #28 ABTB2 (ENSBIXG00005014726) #29 NAT10 (ENSBIXG00005014676) #30 CAPRIN1 (ENSBIXG00005014616) #31 LMO2 (ENSBIXG00005014567) #32 FBXO3 (ENSBIXG00005014542) #33 ENSBIXG00005014479 #34 C11orf91 (ENSBIXG00005014472) #35 KIAA1549L (ENSBIXG00005014441) #36 HIPK3 (ENSBIXG00005001887) #37 Cow MODERN SPECIES 6 HSD17B12 (ENSBTAG00000000087) TTC17 (ENSBTAG00000031299) API5 (ENSBTAG00000014474) ENSBTAG00000051591 LRRC4C (ENSBTAG00000007324) #7 IFTAP (ENSBTAG00000021611) #11 RAG2 (ENSBTAG00000031309) #12 RAG1 (ENSBTAG00000040293) #13 TRAF6 (ENSBTAG00000036009) #14 PRR5L (ENSBTAG00000021029) #15 COMMD9 (ENSBTAG00000019045) #16 LDLRAD3 (ENSBTAG00000044158) #17 TRIM44 (ENSBTAG00000037389) #19 FJX1 (ENSBTAG00000047083) #20 PAMR1 (ENSBTAG00000012630) #21 SLC1A2 (ENSBTAG00000012628) #22 CD44 (ENSBTAG00000011578) #23 PDHX (ENSBTAG00000018261) #24 APIP (ENSBTAG00000018257) #25 EHF (ENSBTAG00000017150) #26 ELF5 (ENSBTAG00000012460) #27 CAT (ENSBTAG00000020980) #28 ABTB2 (ENSBTAG00000005923) #29 NAT10 (ENSBTAG00000016747) #30 CAPRIN1 (ENSBTAG00000016744) #31 LMO2 (ENSBTAG00000006951) #32 FBXO3 (ENSBTAG00000010071) #33 CD59 (ENSBTAG00000002302) #34 C15H11orf91 (ENSBTAG00000027577) #35 KIAA1549L (ENSBTAG00000012846) #36 HIPK3 (ENSBTAG00000014884) #37 Bos_a ANCESTRAL SPECIES 36 ENSGT00390000006196 ENSGT00390000010991 ENSGT00950000185588 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426.r #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT01100000263481.n.a.b.b.a.b.a.a.a.a.a ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Wild yak MODERN SPECIES 353 IFTAP (ENSBMUG00000009417) #11 RAG2 (ENSBMUG00000009389) #12 RAG1 (ENSBMUG00000009374) #13 ENSBMUG00000009367 #14 PRR5L (ENSBMUG00000009349) #15 COMMD9 (ENSBMUG00000009313) #16 LDLRAD3 (ENSBMUG00000009294) #17 TRIM44 (ENSBMUG00000009270) #19 PAMR1 (ENSBMUG00000009249) #21 SLC1A2 (ENSBMUG00000009209) #22 CD44 (ENSBMUG00000008990) #23 PDHX (ENSBMUG00000008856) #24 APIP (ENSBMUG00000008830) #25 EHF (ENSBMUG00000008785) #26 ELF5 (ENSBMUG00000008695) #27 CAT (ENSBMUG00000008657) #28 ABTB2 (ENSBMUG00000008640) #29 NAT10 (ENSBMUG00000008507) #30 CAPRIN1 (ENSBMUG00000008415) #31 LMO2 (ENSBMUG00000008395) #32 ENSBMUG00000008388 FBXO3 (ENSBMUG00000008379) #33 ENSBMUG00000008356 #34 C11orf91 (ENSBMUG00000008344) #35 KIAA1549L (ENSBMUG00000008324) #36 Domestic yak MODERN SPECIES 4 API5 (ENSBGRG00000023877) ENSBGRG00000023797 LRRC4C (ENSBGRG00000023742) #7 IFTAP (ENSBGRG00000023557) #11 RAG2 (ENSBGRG00000023532) #12 RAG1 (ENSBGRG00000023505) #13 ENSBGRG00000023402 #14 PRR5L (ENSBGRG00000023331) #15 COMMD9 (ENSBGRG00000023221) #16 ENSBGRG00000023199 LDLRAD3 (ENSBGRG00000023131) #17 TRIM44 (ENSBGRG00000023024) #19 FJX1 (ENSBGRG00000022999) #20 PAMR1 (ENSBGRG00000022671) #21 ENSBGRG00000022651 SLC1A2 (ENSBGRG00000021839) #22 CD44 (ENSBGRG00000020517) #23 PDHX (ENSBGRG00000020368) #24 APIP (ENSBGRG00000020331) #25 ENSBGRG00000020318 EHF (ENSBGRG00000020179) #26 ENSBGRG00000020151 ELF5 (ENSBGRG00000019841) #27 CAT (ENSBGRG00000019772) #28 ABTB2 (ENSBGRG00000019531) #29 NAT10 (ENSBGRG00000019234) #30 CAPRIN1 (ENSBGRG00000019088) #31 LMO2 (ENSBGRG00000019008) #32 FBXO3 (ENSBGRG00000018736) #33 ENSBGRG00000018697 #34 C11orf91 (ENSBGRG00000018630) #35 American bison MODERN SPECIES 3375 IFTAP (ENSBBBG00000011500) #11 RAG2 (ENSBBBG00000011509) #12 RAG1 (ENSBBBG00000011514) #13 TRAF6 (ENSBBBG00000011532) #14 PRR5L (ENSBBBG00000011560) #15 COMMD9 (ENSBBBG00000002127) #16 LDLRAD3 (ENSBBBG00000011618) #17 TRIM44 (ENSBBBG00000011629) #19 PAMR1 (ENSBBBG00000011674) #21 SLC1A2 (ENSBBBG00000011827) #22 CD44 (ENSBBBG00000011908) #23 PDHX (ENSBBBG00000008496) #24 APIP (ENSBBBG00000011938) #25 EHF (ENSBBBG00000011971) #26 ELF5 (ENSBBBG00000011994) #27 CAT (ENSBBBG00000002255) #28 ABTB2 (ENSBBBG00000012027) #29 NAT10 (ENSBBBG00000012102) #30 CAPRIN1 (ENSBBBG00000012178) #31 LMO2 (ENSBBBG00000012191) #32 FBXO3 (ENSBBBG00000007069) #33 ENSBBBG00000012235 #34 C11orf91 (ENSBBBG00000012241) #35 KIAA1549L (ENSBBBG00000002311) #36 HIPK3 (ENSBBBG00000012315) #37 Siberian musk deer MODERN SPECIES 120 TRIM44 (ENSMMSG00000012109) #19 FJX1 (ENSMMSG00000012126) #20 PAMR1 (ENSMMSG00000012138) #21 SLC1A2 (ENSMMSG00000012275) #22 CD44 (ENSMMSG00000012911) #23 PDHX (ENSMMSG00000013182) #24 APIP (ENSMMSG00000013211) #25 EHF (ENSMMSG00000013240) #26 ELF5 (ENSMMSG00000013297) #27 CAT (ENSMMSG00000013424) #28 ABTB2 (ENSMMSG00000013452) #29 NAT10 (ENSMMSG00000013533) #30 CAPRIN1 (ENSMMSG00000013695) #31 LMO2 (ENSMMSG00000013814) #32 FBXO3 (ENSMMSG00000013856) #33 ENSMMSG00000013910 #34 C11orf91 (ENSMMSG00000013918) #35 KIAA1549L (ENSMMSG00000013942) #36 HIPK3 (ENSMMSG00000014072) #37 Yarkand deer MODERN SPECIES API5 (ENSCHYG00000000112) ENSCHYG00000000090 LRRC4C (ENSCHYG00000000081) #7 IFTAP (ENSCHYG00000000051) #11 RAG2 (ENSCHYG00000017191) #12 RAG1 (ENSCHYG00000017160) #13 TRAF6 (ENSCHYG00000017116) #14 PRR5L (ENSCHYG00000017023) #15 COMMD9 (ENSCHYG00000016864) #16 LDLRAD3 (ENSCHYG00000016638) #17 ENSCHYG00000016596 TRIM44 (ENSCHYG00000016460) #19 ENSCHYG00000016423 FJX1 (ENSCHYG00000016393) #20 PAMR1 (ENSCHYG00000016185) #21 SLC1A2 (ENSCHYG00000013221) #22 CD44 (ENSCHYG00000012096) #23 PDHX (ENSCHYG00000011875) #24 APIP (ENSCHYG00000011773) #25 EHF (ENSCHYG00000011655) #26 ELF5 (ENSCHYG00000011420) #27 ENSCHYG00000011376 ENSCHYG00000011268 #28 ABTB2 (ENSCHYG00000011077) #29 NAT10 (ENSCHYG00000010483) #30 ENSCHYG00000010227 #31 LMO2 (ENSCHYG00000010101) #32 ENSCHYG00000010048 FBXO3 (ENSCHYG00000009875) #33 ENSCHYG00000009843 #34 C11orf91 (ENSCHYG00000009815) #35 Camelidae ANCESTRAL SPECIES 25 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000004029.m ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Arabian camel MODERN SPECIES 1 ENSCDRG00005013476 TTC17 (ENSCDRG00005013500) API5 (ENSCDRG00005013676) LRRC4C (ENSCDRG00005014168) #7 ENSCDRG00005014183 IFTAP (ENSCDRG00005014214) #11 RAG2 (ENSCDRG00005014248) #12 RAG1 (ENSCDRG00005014267) #13 TRAF6 (ENSCDRG00005014279) #14 PRR5L (ENSCDRG00005014325) #15 ENSCDRG00005014439 COMMD9 (ENSCDRG00005014454) #16 LDLRAD3 (ENSCDRG00005014562) #17 TRIM44 (ENSCDRG00005014729) #19 PAMR1 (ENSCDRG00005014873) #21 SLC1A2 (ENSCDRG00005015138) #22 CD44 (ENSCDRG00005016811) #23 PDHX (ENSCDRG00005017404) #24 APIP (ENSCDRG00005017467) #25 EHF (ENSCDRG00005017510) #26 ELF5 (ENSCDRG00005017592) #27 CAT (ENSCDRG00005017656) #28 ABTB2 (ENSCDRG00005017710) #29 NAT10 (ENSCDRG00005017893) #30 CAPRIN1 (ENSCDRG00005017986) #31 LMO2 (ENSCDRG00005018050) #32 FBXO3 (ENSCDRG00005018128) #33 C11orf91 (ENSCDRG00005018309) #35 KIAA1549L (ENSCDRG00005018372) #36 HIPK3 (ENSCDRG00005018642) #37 CSTF3 (ENSCDRG00005018752) Alpaca MODERN SPECIES 3661 SLC1A2 (ENSVPAG00000001388) #22 CD44 (ENSVPAG00000001386) #23 Laurasiatheria_b ANCESTRAL SPECIES 1 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Carnivora ANCESTRAL SPECIES 7 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Caniformia ANCESTRAL SPECIES 25 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00390000008610.a.b.a.a.a Canidae ANCESTRAL SPECIES 32 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00940000153664.A.a.m.b.b.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.b ##23 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Canis_lupus ANCESTRAL SPECIES 7 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00940000153664.A.a.m.b.b.b ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.b ##23 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Dog MODERN SPECIES 9 ENSCAFG00845019858 ENSCAFG00845019880 ENSCAFG00845019925 SRP14 (ENSCAFG00845020059) ENSCAFG00845020075 C18H11orf74 (ENSCAFG00845020128) #11 RAG2 (ENSCAFG00845020240) #12 RAG1 (ENSCAFG00845020263) #13 TRAF6 (ENSCAFG00845020292) #14 PRR5L (ENSCAFG00845020467) #15 COMMD9 (ENSCAFG00845020681) #16 LDLRAD3 (ENSCAFG00845020785) #17 TRIM44 (ENSCAFG00845020854) #19 PAMR1 (ENSCAFG00845020986) #21 FJX1 (ENSCAFG00845021321) #20 SLC1A2 (ENSCAFG00845021493) #22 ENSCAFG00845022224 CD44 (ENSCAFG00845022357) #23 PDHX (ENSCAFG00845023240) #24 ENSCAFG00845023357 #25 EHF (ENSCAFG00845023567) #26 ELF5 (ENSCAFG00845023760) #27 CAT (ENSCAFG00845024098) #28 ABTB2 (ENSCAFG00845024235) #29 NAT10 (ENSCAFG00845024338) #30 CAPRIN1 (ENSCAFG00845024554) #31 ENSCAFG00845024754 #32 FBXO3 (ENSCAFG00845024924) #33 ENSCAFG00845025193 #34 C18H11orf91 (ENSCAFG00845025250) #35 KIAA1549L (ENSCAFG00845025341) #36 Dingo MODERN SPECIES 69 TTC17 (ENSCAFG00020006461) API5 (ENSCAFG00020006440) LRRC4C (ENSCAFG00020006434) #7 ENSCAFG00020006430 ENSCAFG00020006429 IFTAP (ENSCAFG00020006414) #11 RAG2 (ENSCAFG00020006410) #12 RAG1 (ENSCAFG00020006408) #13 TRAF6 (ENSCAFG00020006405) #14 PRR5L (ENSCAFG00020006403) #15 COMMD9 (ENSCAFG00020006401) #16 LDLRAD3 (ENSCAFG00020006398) #17 TRIM44 (ENSCAFG00020006383) #19 FJX1 (ENSCAFG00020006380) #20 PAMR1 (ENSCAFG00020006373) #21 SLC1A2 (ENSCAFG00020005675) #22 ENSCAFG00020005623 ##23 ENSCAFG00020005617 #23 PDHX (ENSCAFG00020005609) #24 APIP (ENSCAFG00020005596) #25 EHF (ENSCAFG00020005591) #26 ELF5 (ENSCAFG00020005583) #27 CAT (ENSCAFG00020005081) #28 ABTB2 (ENSCAFG00020004564) #29 NAT10 (ENSCAFG00020004530) #30 CAPRIN1 (ENSCAFG00020004525) #31 LMO2 (ENSCAFG00020004522) #32 ENSCAFG00020004519 #33 FBXO3 (ENSCAFG00020004513) #33 ENSCAFG00020004510 #34 C11orf91 (ENSCAFG00020004506) #35 Red fox MODERN SPECIES 94 CUNH11orf74 (ENSVVUG00000006953) #11 RAG2 (ENSVVUG00000006959) #12 RAG1 (ENSVVUG00000006961) #13 TRAF6 (ENSVVUG00000006963) #14 PRR5L (ENSVVUG00000006971) #15 COMMD9 (ENSVVUG00000006987) #16 LDLRAD3 (ENSVVUG00000006994) #17 TRIM44 (ENSVVUG00000007028) #19 PAMR1 (ENSVVUG00000007035) #21 SLC1A2 (ENSVVUG00000007051) #22 ENSVVUG00000007088 ENSVVUG00000007105 #23 PDHX (ENSVVUG00000007134) #24 APIP (ENSVVUG00000007155) #25 ENSVVUG00000007187 #26 ENSVVUG00000007189 #26 ELF5 (ENSVVUG00000007199) #27 CAT (ENSVVUG00000007313) #28 ABTB2 (ENSVVUG00000010052) #29 NAT10 (ENSVVUG00000010185) #30 CAPRIN1 (ENSVVUG00000010396) #31 LMO2 (ENSVVUG00000014876) #32 FBXO3 (ENSVVUG00000014883) #33 CD59 (ENSVVUG00000014886) #34 C11orf91 (ENSVVUG00000014887) #35 Caniformia_b ANCESTRAL SPECIES 3 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Ursidae ANCESTRAL SPECIES 2 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310.f #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Ursus ANCESTRAL SPECIES 69 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310.f #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 American black bear MODERN SPECIES 837 PAMR1 (ENSUAMG00000021590) #21 SLC1A2 (ENSUAMG00000021592) #22 ENSUAMG00000021597 #23 Polar bear MODERN SPECIES 141 ENSUMAG00000017431 IFTAP (ENSUMAG00000017436) #11 RAG2 (ENSUMAG00000017443) #12 RAG1 (ENSUMAG00000017447) #13 TRAF6 (ENSUMAG00000017451) #14 PRR5L (ENSUMAG00000017453) #15 COMMD9 (ENSUMAG00000017457) #16 LDLRAD3 (ENSUMAG00000017460) #17 TRIM44 (ENSUMAG00000017467) #19 PAMR1 (ENSUMAG00000017480) #21 SLC1A2 (ENSUMAG00000017517) #22 CD44 (ENSUMAG00000017982) #23 PDHX (ENSUMAG00000018023) #24 APIP (ENSUMAG00000018044) #25 EHF (ENSUMAG00000018075) #26 ELF5 (ENSUMAG00000018100) #27 CAT (ENSUMAG00000018116) #28 ENSUMAG00000018139 #29 NAT10 (ENSUMAG00000018144) #30 CAPRIN1 (ENSUMAG00000018261) #31 LMO2 (ENSUMAG00000018838) #32 FBXO3 (ENSUMAG00000018845) #33 ENSUMAG00000018860 #34 KIAA1549L (ENSUMAG00000018865) #36 HIPK3 (ENSUMAG00000018921) #37 CSTF3 (ENSUMAG00000018971) Giant Panda MODERN SPECIES 7 ALKBH3 (ENSAMEG00000004842) HSD17B12 (ENSAMEG00000004853) TTC17 (ENSAMEG00000011414) API5 (ENSAMEG00000011377) LRRC4C (ENSAMEG00000018951) #7 ENSAMEG00000029325 IFTAP (ENSAMEG00000013857) #11 RAG2 (ENSAMEG00000019398) #12 RAG1 (ENSAMEG00000019378) #13 TRAF6 (ENSAMEG00000013844) #14 PRR5L (ENSAMEG00000013834) #15 COMMD9 (ENSAMEG00000013820) #16 LDLRAD3 (ENSAMEG00000013817) #17 TRIM44 (ENSAMEG00000030107) #19 PAMR1 (ENSAMEG00000007801) #21 SLC1A2 (ENSAMEG00000007834) #22 CD44 (ENSAMEG00000007891) #23 PDHX (ENSAMEG00000007973) #24 APIP (ENSAMEG00000008004) #25 EHF (ENSAMEG00000008016) #26 ELF5 (ENSAMEG00000008027) #27 CAT (ENSAMEG00000008040) #28 ABTB2 (ENSAMEG00000008073) #29 NAT10 (ENSAMEG00000008124) #30 CAPRIN1 (ENSAMEG00000008137) #31 LMO2 (ENSAMEG00000024401) #32 FBXO3 (ENSAMEG00000007335) #33 ENSAMEG00000007332 #34 C11orf91 (ENSAMEG00000007331) #35 KIAA1549L (ENSAMEG00000007317) #36 HIPK3 (ENSAMEG00000007251) #37 Mustelinae ANCESTRAL SPECIES 30 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 American mink MODERN SPECIES 206 IFTAP (ENSNVIG00000010445) #11 RAG2 (ENSNVIG00000010515) #12 RAG1 (ENSNVIG00000010524) #13 TRAF6 (ENSNVIG00000010526) #14 PRR5L (ENSNVIG00000010558) #15 COMMD9 (ENSNVIG00000010596) #16 LDLRAD3 (ENSNVIG00000010613) #17 TRIM44 (ENSNVIG00000010658) #19 FJX1 (ENSNVIG00000010696) #20 PAMR1 (ENSNVIG00000010713) #21 SLC1A2 (ENSNVIG00000010815) #22 CD44 (ENSNVIG00000011008) #23 PDHX (ENSNVIG00000011353) #24 APIP (ENSNVIG00000011384) #25 EHF (ENSNVIG00000011394) #26 ELF5 (ENSNVIG00000011461) #27 CAT (ENSNVIG00000011546) #28 ENSNVIG00000011573 ABTB2 (ENSNVIG00000011580) #29 NAT10 (ENSNVIG00000011618) #30 CAPRIN1 (ENSNVIG00000011682) #31 LMO2 (ENSNVIG00000011819) #32 FBXO3 (ENSNVIG00000011833) #33 ENSNVIG00000011905 #34 C11orf91 (ENSNVIG00000011918) #35 Ferret MODERN SPECIES 213 ENSMPUG00000011817 ENSMPUG00000019966 ENSMPUG00000011808 ENSMPUG00000011803 IFTAP (ENSMPUG00000011792) #11 RAG2 (ENSMPUG00000019965) #12 RAG1 (ENSMPUG00000019963) #13 TRAF6 (ENSMPUG00000011785) #14 PRR5L (ENSMPUG00000011777) #15 COMMD9 (ENSMPUG00000011733) #16 LDLRAD3 (ENSMPUG00000011724) #17 TRIM44 (ENSMPUG00000011720) #19 PAMR1 (ENSMPUG00000011711) #21 ENSMPUG00000011703 SLC1A2 (ENSMPUG00000011697) #22 CD44 (ENSMPUG00000011692) #23 ENSMPUG00000011691 PDHX (ENSMPUG00000011686) #24 APIP (ENSMPUG00000011681) #25 ENSMPUG00000019961 EHF (ENSMPUG00000011676) #26 ELF5 (ENSMPUG00000011669) #27 CAT (ENSMPUG00000011661) #28 ABTB2 (ENSMPUG00000011650) #29 NAT10 (ENSMPUG00000011636) #30 CAPRIN1 (ENSMPUG00000011533) #31 LMO2 (ENSMPUG00000011529) #32 FBXO3 (ENSMPUG00000011527) #33 ENSMPUG00000011525 #34 KIAA1549L (ENSMPUG00000011479) #36 Felidae ANCESTRAL SPECIES ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT01080000258056 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Panthera ANCESTRAL SPECIES 13 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT01080000258056 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 Panthera_a ANCESTRAL SPECIES 20 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT01080000258056 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00860000135900 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 lion MODERN SPECIES 10 HSD17B12 (ENSPLOG00000008903) TTC17 (ENSPLOG00000008790) API5 (ENSPLOG00000008595) LRRC4C (ENSPLOG00000008513) #7 ENSPLOG00000008507 ENSPLOG00000008466 #11 RAG2 (ENSPLOG00000008456) #12 RAG1 (ENSPLOG00000008443) #13 TRAF6 (ENSPLOG00000008425) #14 PRR5L (ENSPLOG00000008389) #15 COMMD9 (ENSPLOG00000008326) #16 LDLRAD3 (ENSPLOG00000008283) #17 TRIM44 (ENSPLOG00000008259) #19 FJX1 (ENSPLOG00000008243) #20 PAMR1 (ENSPLOG00000008067) #21 SLC1A2 (ENSPLOG00000007683) #22 CD44 (ENSPLOG00000007114) #23 PDHX (ENSPLOG00000006867) #24 APIP (ENSPLOG00000006818) #25 EHF (ENSPLOG00000006746) #26 ELF5 (ENSPLOG00000006649) #27 CAT (ENSPLOG00000006594) #28 ABTB2 (ENSPLOG00000006563) #29 NAT10 (ENSPLOG00000006429) #30 CAPRIN1 (ENSPLOG00000006323) #31 LMO2 (ENSPLOG00000006289) #32 FBXO3 (ENSPLOG00000006226) #33 ENSPLOG00000006208 #34 C11orf91 (ENSPLOG00000006184) #35 KIAA1549L (ENSPLOG00000006130) #36 ENSPLOG00000006097 leopard MODERN SPECIES 58 HSD17B12 (ENSPPRG00000006417) TTC17 (ENSPPRG00000007478) API5 (ENSPPRG00000009130) LRRC4C (ENSPPRG00000014339) #7 ENSPPRG00000010539 IFTAP (ENSPPRG00000011787) #11 RAG2 (ENSPPRG00000014398) #12 RAG1 (ENSPPRG00000014408) #13 TRAF6 (ENSPPRG00000014400) #14 PRR5L (ENSPPRG00000016644) #15 COMMD9 (ENSPPRG00000019409) #16 LDLRAD3 (ENSPPRG00000021111) #17 TRIM44 (ENSPPRG00000024621) #19 FJX1 (ENSPPRG00000014592) #20 PAMR1 (ENSPPRG00000024334) #21 SLC1A2 (ENSPPRG00000023959) #22 CD44 (ENSPPRG00000000038) #23 PDHX (ENSPPRG00000001608) #24 APIP (ENSPPRG00000001755) #25 EHF (ENSPPRG00000003174) #26 ELF5 (ENSPPRG00000004467) #27 CAT (ENSPPRG00000004841) #28 ABTB2 (ENSPPRG00000005727) #29 NAT10 (ENSPPRG00000010254) #30 CAPRIN1 (ENSPPRG00000015436) #31 ENSPPRG00000016118 LMO2 (ENSPPRG00000018220) #32 FBXO3 (ENSPPRG00000001019) #33 C11orf91 (ENSPPRG00000001328) #35 Tiger MODERN SPECIES 167 ACCS (ENSPTIG00000019737) ACCSL (ENSPTIG00000019690) ALKBH3 (ENSPTIG00000019393) HSD17B12 (ENSPTIG00000019106) TTC17 (ENSPTIG00000018326) API5 (ENSPTIG00000016928) IFTAP (ENSPTIG00000016603) #11 RAG2 (ENSPTIG00000010550) #12 RAG1 (ENSPTIG00000010538) #13 TRAF6 (ENSPTIG00000016499) #14 PRR5L (ENSPTIG00000016288) #15 COMMD9 (ENSPTIG00000015891) #16 LDLRAD3 (ENSPTIG00000015733) #17 TRIM44 (ENSPTIG00000015209) #19 PAMR1 (ENSPTIG00000014525) #21 SLC1A2 (ENSPTIG00000014147) #22 ENSPTIG00000013480 #23 PDHX (ENSPTIG00000012744) #24 APIP (ENSPTIG00000012600) #25 EHF (ENSPTIG00000012053) #26 ELF5 (ENSPTIG00000011739) #27 CAT (ENSPTIG00000011430) #28 ABTB2 (ENSPTIG00000011181) #29 NAT10 (ENSPTIG00000010705) #30 CAPRIN1 (ENSPTIG00000009952) #31 ENSPTIG00000009923 LMO2 (ENSPTIG00000009865) #32 FBXO3 (ENSPTIG00000009375) #33 ENSPTIG00000009249 C11orf91 (ENSPTIG00000009247) #35 KIAA1549L (ENSPTIG00000008984) #36 Cat MODERN SPECIES 241 ACCSL (ENSFCAG00000005617) HSD17B12 (ENSFCAG00000022122) TTC17 (ENSFCAG00000023058) API5 (ENSFCAG00000031994) LRRC4C (ENSFCAG00000027958) #7 ENSFCAG00000030215 CD1H11orf74 (ENSFCAG00000039567) #11 RAG2 (ENSFCAG00000002909) #12 TRAF6 (ENSFCAG00000036371) #14 PRR5L (ENSFCAG00000028983) #15 COMMD9 (ENSFCAG00000038308) #16 LDLRAD3 (ENSFCAG00000040060) #17 TRIM44 (ENSFCAG00000025850) #19 FJX1 (ENSFCAG00000046575) #20 PAMR1 (ENSFCAG00000005892) #21 SLC1A2 (ENSFCAG00000005890) #22 CD44 (ENSFCAG00000005887) #23 PDHX (ENSFCAG00000023884) #24 APIP (ENSFCAG00000002557) #25 EHF (ENSFCAG00000036037) #26 ELF5 (ENSFCAG00000022294) #27 CAT (ENSFCAG00000002030) #28 ABTB2 (ENSFCAG00000002029) #29 NAT10 (ENSFCAG00000002028) #30 CAPRIN1 (ENSFCAG00000030411) #31 ENSFCAG00000013842 LMO2 (ENSFCAG00000036087) #32 FBXO3 (ENSFCAG00000010140) #33 ENSFCAG00000053575 #34 CD1H11orf91 (ENSFCAG00000029946) #35 KIAA1549L (ENSFCAG00000010134) #36 Laurasiatheria_c ANCESTRAL SPECIES 9 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Equus ANCESTRAL SPECIES 56 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00390000004856.w.a.a.b.b.a.a ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00950000182976.a.b ENSGT00940000157402 ENSGT00390000006758.b ENSGT00940000155960.b #37 Horse MODERN SPECIES 3 API5 (ENSECAG00000047216) ENSECAG00000002481 LRRC4C (ENSECAG00000022329) #7 IFTAP (ENSECAG00000022013) #11 RAG2 (ENSECAG00000021988) #12 RAG1 (ENSECAG00000021936) #13 TRAF6 (ENSECAG00000021091) #14 PRR5L (ENSECAG00000020162) #15 COMMD9 (ENSECAG00000019749) #16 ENSECAG00000046809 ENSECAG00000053975 LDLRAD3 (ENSECAG00000019236) #17 TRIM44 (ENSECAG00000018868) #19 FJX1 (ENSECAG00000006501) #20 PAMR1 (ENSECAG00000018049) #21 SLC1A2 (ENSECAG00000015644) #22 CD44 (ENSECAG00000010267) #23 ENSECAG00000006372 PDHX (ENSECAG00000008611) #24 APIP (ENSECAG00000006357) #25 EHF (ENSECAG00000000752) #26 ELF5 (ENSECAG00000023321) #27 CAT (ENSECAG00000019408) #28 ABTB2 (ENSECAG00000016829) #29 NAT10 (ENSECAG00000011621) #30 CAPRIN1 (ENSECAG00000007147) #31 LMO2 (ENSECAG00000007061) #32 DEPDC7 (ENSECAG00000001667) TCP11L1 (ENSECAG00000023796) CSTF3 (ENSECAG00000023338) ENSECAG00000054065 Donkey MODERN SPECIES 8 HSD17B12 (ENSEASG00005014853) TTC17 (ENSEASG00005014829) API5 (ENSEASG00005014816) ENSEASG00005014801 LRRC4C (ENSEASG00005014797) #7 IFTAP (ENSEASG00005013541) #11 RAG2 (ENSEASG00005013540) #12 RAG1 (ENSEASG00005013538) #13 TRAF6 (ENSEASG00005033142) #14 PRR5L (ENSEASG00005013530) #15 COMMD9 (ENSEASG00005013520) #16 LDLRAD3 (ENSEASG00005025501) #17 TRIM44 (ENSEASG00005020267) #19 FJX1 (ENSEASG00005020266) #20 PAMR1 (ENSEASG00005020262) #21 SLC1A2 (ENSEASG00005020253) #22 CD44 (ENSEASG00005020242) #23 ENSEASG00005020239 PDHX (ENSEASG00005020238) #24 ENSEASG00005027939 #25 EHF (ENSEASG00005020235) #26 ELF5 (ENSEASG00005020232) #27 CAT (ENSEASG00005020225) #28 ABTB2 (ENSEASG00005020219) #29 NAT10 (ENSEASG00005020208) #30 ENSEASG00005020196 #31 ENSEASG00005020188 #32 ENSEASG00005020184 TCP11L1 (ENSEASG00005020168) CSTF3 (ENSEASG00005019884) HIPK3 (ENSEASG00005019865) #37 Chiroptera ANCESTRAL SPECIES 5 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Microchiroptera ANCESTRAL SPECIES 31 ENSGT00940000157226 ENSGT00940000154860 ENSGT00520000059086 ENSGT00390000006196 ENSGT00390000010991 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Greater horseshoe bat MODERN SPECIES 2 LRRC4C (ENSRFEG00010004345) #7 ENSRFEG00010004357 ENSRFEG00010004372 ENSRFEG00010004383 IFTAP (ENSRFEG00010004417) #11 ENSRFEG00010004464 RAG2 (ENSRFEG00010004473) #12 RAG1 (ENSRFEG00010004482) #13 TRAF6 (ENSRFEG00010004489) #14 PRR5L (ENSRFEG00010004515) #15 COMMD9 (ENSRFEG00010004551) #16 LDLRAD3 (ENSRFEG00010004588) #17 TRIM44 (ENSRFEG00010004609) #19 FJX1 (ENSRFEG00010004625) #20 PAMR1 (ENSRFEG00010004646) #21 SLC1A2 (ENSRFEG00010004715) #22 CD44 (ENSRFEG00010004816) #23 PDHX (ENSRFEG00010004865) #24 APIP (ENSRFEG00010004888) #25 EHF (ENSRFEG00010004916) #26 ELF5 (ENSRFEG00010004964) #27 CAT (ENSRFEG00010004980) #28 ENSRFEG00010004989 ABTB2 (ENSRFEG00010004996) #29 NAT10 (ENSRFEG00010005015) #30 ENSRFEG00010005050 #31 LMO2 (ENSRFEG00010005073) #32 FBXO3 (ENSRFEG00010005119) #33 ENSRFEG00010005183 #34 C11orf91 (ENSRFEG00010005190) #35 KIAA1549L (ENSRFEG00010005232) #36 Microbat MODERN SPECIES 1436 TRIM44 (ENSMLUG00000010114) #19 FJX1 (ENSMLUG00000026191) #20 PAMR1 (ENSMLUG00000010089) #21 SLC1A2 (ENSMLUG00000010057) #22 ENSMLUG00000010025 #23 Megabat MODERN SPECIES 179 PAMR1 (ENSPVAG00000010501) #21 SLC1A2 (ENSPVAG00000010499) #22 CD44 (ENSPVAG00000010495) #23 Atlantogenata ANCESTRAL SPECIES 13 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 ENSGT00390000006758.b Afrotheria ANCESTRAL SPECIES 16 ENSGT00940000157226 ENSGT00940000154860.j ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 ENSGT00390000006758.b Afrotheria_a ANCESTRAL SPECIES 17 ENSGT00940000157226 ENSGT00940000154860.j ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 ENSGT00390000006758.b Elephant MODERN SPECIES 209 ENSLAFG00000003439 TTC17 (ENSLAFG00000001692) API5 (ENSLAFG00000001688) ENSLAFG00000028516 LRRC4C (ENSLAFG00000006244) #7 IFTAP (ENSLAFG00000016474) #11 RAG2 (ENSLAFG00000016472) #12 RAG1 (ENSLAFG00000023175) #13 TRAF6 (ENSLAFG00000016463) #14 PRR5L (ENSLAFG00000016459) #15 COMMD9 (ENSLAFG00000001396) #16 LDLRAD3 (ENSLAFG00000017028) #17 TRIM44 (ENSLAFG00000016722) #19 FJX1 (ENSLAFG00000026391) #20 PAMR1 (ENSLAFG00000017692) #21 SLC1A2 (ENSLAFG00000017684) #22 CD44 (ENSLAFG00000017676) #23 PDHX (ENSLAFG00000013165) #24 APIP (ENSLAFG00000013662) #25 EHF (ENSLAFG00000011235) #26 ELF5 (ENSLAFG00000005823) #27 CAT (ENSLAFG00000005810) #28 ABTB2 (ENSLAFG00000030946) #29 NAT10 (ENSLAFG00000012393) #30 CAPRIN1 (ENSLAFG00000012387) #31 LMO2 (ENSLAFG00000008865) #32 ENSLAFG00000026975 FBXO3 (ENSLAFG00000004396) #33 C11orf91 (ENSLAFG00000006492) #35 KIAA1549L (ENSLAFG00000022670) #36 HIPK3 (ENSLAFG00000013962) #37 Hyrax MODERN SPECIES 944 SLC1A2 (ENSPCAG00000007754) #22 Tenrec MODERN SPECIES 1252 PAMR1 (ENSETEG00000015276) #21 SLC1A2 (ENSETEG00000015275) #22 Xenarthra ANCESTRAL SPECIES 30 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 ENSGT00390000006758.b Sloth MODERN SPECIES 1033 SLC1A2 (ENSCHOG00000001451) #22 Armadillo MODERN SPECIES 307 COMMD9 (ENSDNOG00000043431) #16 LDLRAD3 (ENSDNOG00000017788) #17 TRIM44 (ENSDNOG00000008427) #19 FJX1 (ENSDNOG00000042436) #20 PAMR1 (ENSDNOG00000000119) #21 SLC1A2 (ENSDNOG00000000116) #22 CD44 (ENSDNOG00000000112) #23 PDHX (ENSDNOG00000008267) #24 APIP (ENSDNOG00000008263) #25 EHF (ENSDNOG00000039646) #26 ELF5 (ENSDNOG00000017462) #27 CAT (ENSDNOG00000017459) #28 ABTB2 (ENSDNOG00000018626) #29 NAT10 (ENSDNOG00000042452) #30 ENSDNOG00000031223 #31 LMO2 (ENSDNOG00000032989) #32 FBXO3 (ENSDNOG00000006486) #33 C11orf91 (ENSDNOG00000048791) #35 KIAA1549L (ENSDNOG00000014287) #36 HIPK3 (ENSDNOG00000018007) #37 CSTF3 (ENSDNOG00000007366) Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.g.b #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.h #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Diprotodontia ANCESTRAL SPECIES 46 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.g.a #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 Diprotodontia_a ANCESTRAL SPECIES 46 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000008099.`c.a ENSGT00940000153298.m.b.a.a.h.a ENSGT00390000013149.g.a #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00390000002169 #35 ENSGT00530000063472.b.b.a.b #36 ENSGT00940000155960.b #37 koala DUPLICATION koala MODERN SPECIES 148 ENSPCIG00000014411 ENSPCIG00000007497 #11 RAG2 (ENSPCIG00000007496) #12 RAG1 (ENSPCIG00000007494) #13 TRAF6 (ENSPCIG00000025154) #14 PRR5L (ENSPCIG00000031166) #15 COMMD9 (ENSPCIG00000025148) #16 LDLRAD3 (ENSPCIG00000025145) #17 ENSPCIG00000030886 #19 FJX1 (ENSPCIG00000013864) #20 PAMR1 (ENSPCIG00000036918) #21 ENSPCIG00000033347 #22 ENSPCIG00000001222 #22 ENSPCIG00000001108 #23 PDHX (ENSPCIG00000001071) #24 APIP (ENSPCIG00000001058) #25 EHF (ENSPCIG00000000856) #26 ELF5 (ENSPCIG00000019729) #27 CAT (ENSPCIG00000019730) #28 ABTB2 (ENSPCIG00000026315) #29 NAT10 (ENSPCIG00000026378) #30 CAPRIN1 (ENSPCIG00000026381) #31 LMO2 (ENSPCIG00000032881) #32 FBXO3 (ENSPCIG00000026386) #33 ENSPCIG00000031932 #34 C11orf91 (ENSPCIG00000026389) #35 KIAA1549L (ENSPCIG00000026390) #36 HIPK3 (ENSPCIG00000026397) #37 koala MODERN SPECIES 148 ENSPCIG00000014411 ENSPCIG00000007497 #11 RAG2 (ENSPCIG00000007496) #12 RAG1 (ENSPCIG00000007494) #13 TRAF6 (ENSPCIG00000025154) #14 PRR5L (ENSPCIG00000031166) #15 COMMD9 (ENSPCIG00000025148) #16 LDLRAD3 (ENSPCIG00000025145) #17 ENSPCIG00000030886 #19 FJX1 (ENSPCIG00000013864) #20 PAMR1 (ENSPCIG00000036918) #21 ENSPCIG00000033347 #22 ENSPCIG00000001222 #22 ENSPCIG00000001108 #23 PDHX (ENSPCIG00000001071) #24 APIP (ENSPCIG00000001058) #25 EHF (ENSPCIG00000000856) #26 ELF5 (ENSPCIG00000019729) #27 CAT (ENSPCIG00000019730) #28 ABTB2 (ENSPCIG00000026315) #29 NAT10 (ENSPCIG00000026378) #30 CAPRIN1 (ENSPCIG00000026381) #31 LMO2 (ENSPCIG00000032881) #32 FBXO3 (ENSPCIG00000026386) #33 ENSPCIG00000031932 #34 C11orf91 (ENSPCIG00000026389) #35 KIAA1549L (ENSPCIG00000026390) #36 Common wonbat MODERN SPECIES 1058 API5 (ENSVURG00010011565) LRRC4C (ENSVURG00010011660) #7 ENSVURG00010011671 ENSVURG00010011681 ENSVURG00010011691 ENSVURG00010011704 ENSVURG00010011715 #11 RAG2 (ENSVURG00010011726) #12 RAG1 (ENSVURG00010011733) #13 TRAF6 (ENSVURG00010011738) #14 PRR5L (ENSVURG00010011749) #15 COMMD9 (ENSVURG00010011757) #16 LDLRAD3 (ENSVURG00010011775) #17 FJX1 (ENSVURG00010011780) #20 PAMR1 (ENSVURG00010011784) #21 SLC1A2 (ENSVURG00010011805) #22 ENSVURG00010011839 #23 PDHX (ENSVURG00010011855) #24 APIP (ENSVURG00010011869) #25 EHF (ENSVURG00010011886) #26 ELF5 (ENSVURG00010011912) #27 CAT (ENSVURG00010011928) #28 ABTB2 (ENSVURG00010011975) #29 NAT10 (ENSVURG00010012623) #30 CAPRIN1 (ENSVURG00010012674) #31 LMO2 (ENSVURG00010012705) #32 FBXO3 (ENSVURG00010012709) #33 ENSVURG00010012719 #34 KIAA1549L (ENSVURG00010012738) #36 HIPK3 (ENSVURG00010012975) #37 ENSVURG00010013024 Wallaby MODERN SPECIES 1933 ENSMEUG00000001447 #22 Tasmanian devil MODERN SPECIES 5 ALKBH3 (ENSSHAG00000024968) HSD17B12 (ENSSHAG00000026618) TTC17 (ENSSHAG00000018903) ENSSHAG00000018895 LRRC4C (ENSSHAG00000015017) #7 ENSSHAG00000032308 ENSSHAG00000024309 #11 RAG2 (ENSSHAG00000027759) #12 RAG1 (ENSSHAG00000030524) #13 TRAF6 (ENSSHAG00000021499) #14 PRR5L (ENSSHAG00000027462) #15 COMMD9 (ENSSHAG00000013073) #16 LDLRAD3 (ENSSHAG00000030828) #17 ENSSHAG00000027936 #19 PAMR1 (ENSSHAG00000006602) #21 SLC1A2 (ENSSHAG00000003454) #22 ENSSHAG00000027755 #23 ENSSHAG00000021071 PDHX (ENSSHAG00000029847) #24 APIP (ENSSHAG00000011523) #25 EHF (ENSSHAG00000010046) #26 ELF5 (ENSSHAG00000025368) #27 CAT (ENSSHAG00000007671) #28 ABTB2 (ENSSHAG00000004178) #29 NAT10 (ENSSHAG00000003443) #30 CAPRIN1 (ENSSHAG00000002731) #31 LMO2 (ENSSHAG00000018647) #32 FBXO3 (ENSSHAG00000018609) #33 ENSSHAG00000031082 KIAA1549L (ENSSHAG00000018497) #36 HIPK3 (ENSSHAG00000018303) #37 Opossum MODERN SPECIES 4 ENSMODG00000024462 ENSMODG00000029605 ENSMODG00000027830 ENSMODG00000051556 ENSMODG00000046146 ENSMODG00000046213 ENSMODG00000019838 #11 RAG2 (ENSMODG00000024469) #12 RAG1 (ENSMODG00000024470) #13 TRAF6 (ENSMODG00000019837) #14 PRR5L (ENSMODG00000019835) #15 COMMD9 (ENSMODG00000019834) #16 LDLRAD3 (ENSMODG00000019832) #17 FJX1 (ENSMODG00000024473) #20 PAMR1 (ENSMODG00000019829) #21 SLC1A2 (ENSMODG00000019823) #22 ENSMODG00000045292 #23 PDHX (ENSMODG00000010015) #24 APIP (ENSMODG00000009997) #25 EHF (ENSMODG00000009989) #26 ELF5 (ENSMODG00000009972) #27 CAT (ENSMODG00000009956) #28 ABTB2 (ENSMODG00000009912) #29 NAT10 (ENSMODG00000009890) #30 CAPRIN1 (ENSMODG00000009867) #31 FBXO3 (ENSMODG00000009829) #33 ENSMODG00000041026 #34 ENSMODG00000009806 #35 KIAA1549L (ENSMODG00000009801) #36 HIPK3 (ENSMODG00000009781) #37 ENSMODG00000009745 Platypus MODERN SPECIES 14 ENSOANG00000009210 TTC17 (ENSOANG00000009406) API5 (ENSOANG00000009405) LRRC4C (ENSOANG00000000566) #7 ENSOANG00000011773 #11 RAG2 (ENSOANG00000011771) #12 RAG1 (ENSOANG00000046813) #13 TRAF6 (ENSOANG00000011769) #14 PRR5L (ENSOANG00000011768) #15 ENSOANG00000011767 #16 LDLRAD3 (ENSOANG00000031345) #17 ENSOANG00000007388 #19 ENSOANG00000036464 FJX1 (ENSOANG00000044309) #20 PAMR1 (ENSOANG00000007389) #21 SLC1A2 (ENSOANG00000007391) #22 ENSOANG00000007392 #23 PDHX (ENSOANG00000007393) #24 APIP (ENSOANG00000007394) #25 EHF (ENSOANG00000007395) #26 ELF5 (ENSOANG00000007396) #27 CAT (ENSOANG00000007397) #28 ABTB2 (ENSOANG00000007399) #29 NAT10 (ENSOANG00000007400) #30 CAPRIN1 (ENSOANG00000007402) #31 LMO2 (ENSOANG00000042666) #32 FBXO3 (ENSOANG00000007403) #33 ENSOANG00000007404 ENSOANG00000007405 SHANK2 (ENSOANG00000007407) CTTN (ENSOANG00000007408) Sauria ANCESTRAL SPECIES 3 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Archelosauria ANCESTRAL SPECIES 2 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Archosauria ANCESTRAL SPECIES 5 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Aves ANCESTRAL SPECIES 2 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Neognathae ANCESTRAL SPECIES 4 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Galloanserae ANCESTRAL SPECIES 4 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Anatidae ANCESTRAL SPECIES 50 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Duck MODERN SPECIES 23 API5 (ENSAPLG00000008406) ENSAPLG00000030081 LRRC4C (ENSAPLG00000001447) #7 ENSAPLG00000018386 ENSAPLG00000023896 IFTAP (ENSAPLG00000013519) #11 RAG2 (ENSAPLG00000011769) #12 RAG1 (ENSAPLG00000011756) #13 TRAF6 (ENSAPLG00000013488) #14 PRR5L (ENSAPLG00000013479) #15 COMMD9 (ENSAPLG00000021527) #16 LDLRAD3 (ENSAPLG00000013350) #17 ENSAPLG00000029093 FJX1 (ENSAPLG00000019807) #20 PAMR1 (ENSAPLG00000012925) #21 SLC1A2 (ENSAPLG00000012571) #22 CD44 (ENSAPLG00000012207) #23 PDHX (ENSAPLG00000011686) #24 APIP (ENSAPLG00000011642) #25 EHF (ENSAPLG00000011349) #26 ELF5 (ENSAPLG00000011073) #27 CAT (ENSAPLG00000010432) #28 ABTB2 (ENSAPLG00000008248) #29 NAT10 (ENSAPLG00000007638) #30 CAPRIN1 (ENSAPLG00000006975) #31 LMO2 (ENSAPLG00000006962) #32 FBXO3 (ENSAPLG00000006774) #33 CD59 (ENSAPLG00000025499) #34 ENSAPLG00000020680 ENSAPLG00000006513 ENSAPLG00000027417 Pink-footed goose MODERN SPECIES 39 HSD17B12 (ENSABRG00000017694) TTC17 (ENSABRG00000017698) API5 (ENSABRG00000017703) LRRC4C (ENSABRG00000017724) #7 ENSABRG00000017736 IFTAP (ENSABRG00000017742) #11 RAG2 (ENSABRG00000017743) #12 RAG1 (ENSABRG00000017745) #13 TRAF6 (ENSABRG00000017746) #14 PRR5L (ENSABRG00000017749) #15 COMMD9 (ENSABRG00000017756) #16 LDLRAD3 (ENSABRG00000017763) #17 ENSABRG00000017769 FJX1 (ENSABRG00000017771) #20 PAMR1 (ENSABRG00000017780) #21 SLC1A2 (ENSABRG00000017782) #22 CD44 (ENSABRG00000017785) #23 PDHX (ENSABRG00000017796) #24 APIP (ENSABRG00000017800) #25 EHF (ENSABRG00000017802) #26 ELF5 (ENSABRG00000017804) #27 CAT (ENSABRG00000017805) #28 ABTB2 (ENSABRG00000017808) #29 NAT10 (ENSABRG00000017812) #30 CAPRIN1 (ENSABRG00000017817) #31 LMO2 (ENSABRG00000017822) #32 FBXO3 (ENSABRG00000017824) #33 CD59 (ENSABRG00000017825) #34 ENSABRG00000017826 ENSABRG00000017827 SHANK2 (ENSABRG00000017831) Phasianidae ANCESTRAL SPECIES 4 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Phasianidae_b ANCESTRAL SPECIES 3 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196.c ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Turkey MODERN SPECIES 25 ENSMGAG00000019204 ENSMGAG00000018057 ENSMGAG00000019331 ENSMGAG00000011380 ENSMGAG00000011426 ENSMGAG00000011407 LRRC4C (ENSMGAG00000015799) #7 IFTAP (ENSMGAG00000010409) #11 RAG2 (ENSMGAG00000015796) #12 RAG1 (ENSMGAG00000015794) #13 TRAF6 (ENSMGAG00000010397) #14 PRR5L (ENSMGAG00000010386) #15 COMMD9 (ENSMGAG00000010379) #16 LDLRAD3 (ENSMGAG00000010377) #17 PAMR1 (ENSMGAG00000010360) #21 SLC1A2 (ENSMGAG00000010336) #22 CD44 (ENSMGAG00000010318) #23 PDHX (ENSMGAG00000010298) #24 APIP (ENSMGAG00000010290) #25 EHF (ENSMGAG00000010275) #26 ELF5 (ENSMGAG00000010265) #27 CAT (ENSMGAG00000010242) #28 ABTB2 (ENSMGAG00000010227) #29 NAT10 (ENSMGAG00000010206) #30 CAPRIN1 (ENSMGAG00000010122) #31 LMO2 (ENSMGAG00000010192) #32 FBXO3 (ENSMGAG00000010146) #33 CD59 (ENSMGAG00000010188) #34 ENSMGAG00000010176 ENSMGAG00000010159 ENSMGAG00000019805 Chicken MODERN SPECIES 34 ALKBH3 (ENSGALG00010019592) HSD17B12 (ENSGALG00010019546) TTC17 (ENSGALG00010021074) API5 (ENSGALG00010021048) LRRC4C (ENSGALG00010023696) #7 C11orf74 (ENSGALG00010025248) #11 RAG2 (ENSGALG00010025239) #12 RAG1 (ENSGALG00010025211) #13 TRAF6 (ENSGALG00010025204) #14 PRR5L (ENSGALG00010025190) #15 COMMD9 (ENSGALG00010025170) #16 LDLRAD3 (ENSGALG00010025163) #17 ENSGALG00010025143 FJX1 (ENSGALG00010026537) #20 PAMR1 (ENSGALG00010025127) #21 SLC1A2 (ENSGALG00010025067) #22 CD44 (ENSGALG00010024974) #23 APIP (ENSGALG00010024945) #25 PDHX (ENSGALG00010024941) #24 EHF (ENSGALG00010024936) #26 ELF5 (ENSGALG00010024926) #27 CAT (ENSGALG00010024911) #28 ABTB2 (ENSGALG00010024886) #29 NAT10 (ENSGALG00010024880) #30 CAPRIN1 (ENSGALG00010024855) #31 LMO2 (ENSGALG00010024846) #32 FBXO3 (ENSGALG00010024818) #33 CD59 (ENSGALG00010024802) #34 ENSGALG00010024799 ACTBL2 (ENSGALG00010024796) SHANK2 (ENSGALG00010024791) Japanese quail MODERN SPECIES 23 WT1 (ENSCJPG00005015366) RCN1 (ENSCJPG00005015369) PAX6 (ENSCJPG00005015377) ELP4 (ENSCJPG00005015383) IMMP1L (ENSCJPG00005015384) DNAJC24 (ENSCJPG00005015385) ENSCJPG00005015386 MPPED2 (ENSCJPG00005015393) ARL14EP (ENSCJPG00005015394) FSHB (ENSCJPG00005015395) KCNA4 (ENSCJPG00005015399) COMMD9 (ENSCJPG00005015405) #16 LDLRAD3 (ENSCJPG00005015406) #17 FJX1 (ENSCJPG00005015411) #20 PAMR1 (ENSCJPG00005015412) #21 SLC1A2 (ENSCJPG00005015413) #22 CD44 (ENSCJPG00005015414) #23 PDHX (ENSCJPG00005015416) #24 APIP (ENSCJPG00005015417) #25 EHF (ENSCJPG00005015419) #26 ELF5 (ENSCJPG00005015420) #27 CAT (ENSCJPG00005015421) #28 ABTB2 (ENSCJPG00005015422) #29 NAT10 (ENSCJPG00005015492) #30 CAPRIN1 (ENSCJPG00005015577) #31 LMO2 (ENSCJPG00005015578) #32 FBXO3 (ENSCJPG00005015579) #33 CD59 (ENSCJPG00005015580) #34 ENSCJPG00005015582 ENSCJPG00005015583 SHANK2 (ENSCJPG00005015584) Neognathae_b ANCESTRAL SPECIES 6 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 Passeriformes ANCESTRAL SPECIES 5 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00940000156431 ENSGT00950000182939.a.b.b ENSGT00940000161492 ENSGT00940000161238 ENSGT00940000155653.b Great tit MODERN SPECIES 25 C11orf96 (ENSPMJG00000000347) ALKBH3 (ENSPMJG00000000332) HSD17B12 (ENSPMJG00000000290) TTC17 (ENSPMJG00000000119) API5 (ENSPMJG00000000083) LRRC4C (ENSPMJG00000010037) #7 ENSPMJG00000010028 #11 RAG2 (ENSPMJG00000010027) #12 RAG1 (ENSPMJG00000010025) #13 TRAF6 (ENSPMJG00000010023) #14 COMMD9 (ENSPMJG00000010021) #16 PRR5L (ENSPMJG00000010019) #15 LDLRAD3 (ENSPMJG00000010000) #17 FJX1 (ENSPMJG00000009999) #20 PAMR1 (ENSPMJG00000009996) #21 SLC1A2 (ENSPMJG00000009957) #22 CD44 (ENSPMJG00000009954) #23 PDHX (ENSPMJG00000009950) #24 APIP (ENSPMJG00000009947) #25 EHF (ENSPMJG00000009945) #26 CPT1A (ENSPMJG00000009938) GAL (ENSPMJG00000009933) PPP6R3 (ENSPMJG00000009913) LRP5 (ENSPMJG00000009906) ENSPMJG00000009902 KMT5B (ENSPMJG00000009869) CHKA (ENSPMJG00000009865) RNH1 (ENSPMJG00000009858) ENSPMJG00000009838 HRAS (ENSPMJG00000009820) LRRC56 (ENSPMJG00000009818) Passeriformes_d ANCESTRAL SPECIES 5 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00940000156431 ENSGT00950000182939.a.b.b ENSGT00940000161492 ENSGT00940000161238 ENSGT00940000155653.b Passeriformes_g ANCESTRAL SPECIES ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00940000156431 ENSGT00950000182939.a.b.b ENSGT00940000161492 ENSGT00940000161238 ENSGT00940000155653.b ENSGT00390000001545 Passeroidea ANCESTRAL SPECIES 1 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT01060000248595.b.a.b.a ENSGT00390000009663 ENSGT00390000009899.a.d ENSGT00940000156574.C ENSGT00940000153377.B ENSGT00940000156431 ENSGT00950000182939.a.b.b ENSGT00940000161492 ENSGT00940000161238 ENSGT00940000155653.b ENSGT00390000001545 Zebra finch MODERN SPECIES 27 HSD17B12 (ENSTGUG00000010212) TTC17 (ENSTGUG00000010175) API5 (ENSTGUG00000010156) ENSTGUG00000023168 LRRC4C (ENSTGUG00000010154) #7 ENSTGUG00000010152 #11 RAG2 (ENSTGUG00000010148) #12 RAG1 (ENSTGUG00000010147) #13 ENSTGUG00000019722 TRAF6 (ENSTGUG00000023943) #14 PRR5L (ENSTGUG00000010127) #15 COMMD9 (ENSTGUG00000010117) #16 LDLRAD3 (ENSTGUG00000010116) #17 ENSTGUG00000010115 PAMR1 (ENSTGUG00000010108) #21 SLC1A2 (ENSTGUG00000021059) #22 CD44 (ENSTGUG00000010085) #23 PDHX (ENSTGUG00000010068) #24 APIP (ENSTGUG00000026500) #25 EHF (ENSTGUG00000010040) #26 CPT1A (ENSTGUG00000009993) GAL (ENSTGUG00000009968) PPP6R3 (ENSTGUG00000009971) LRP5 (ENSTGUG00000009934) ENSTGUG00000020320 KMT5B (ENSTGUG00000009927) CHKA (ENSTGUG00000009915) RNH1 (ENSTGUG00000009896) ENSTGUG00000009885 HRAS (ENSTGUG00000009877) RASSF7 (ENSTGUG00000009857) Common canary MODERN SPECIES 3 EXT2 (ENSSCAG00000003516) ENSSCAG00000003525 ALKBH3 (ENSSCAG00000003531) HSD17B12 (ENSSCAG00000003538) TTC17 (ENSSCAG00000003561) API5 (ENSSCAG00000003585) LRRC4C (ENSSCAG00000003606) #7 IFTAP (ENSSCAG00000003620) #11 RAG2 (ENSSCAG00000003622) #12 RAG1 (ENSSCAG00000003627) #13 TRAF6 (ENSSCAG00000003629) #14 PRR5L (ENSSCAG00000003631) #15 COMMD9 (ENSSCAG00000003638) #16 LDLRAD3 (ENSSCAG00000003644) #17 PAMR1 (ENSSCAG00000003670) #21 SLC1A2 (ENSSCAG00000003675) #22 ENSSCAG00000003684 #23 ENSSCAG00000003691 #23 PDHX (ENSSCAG00000003711) #24 APIP (ENSSCAG00000003723) #25 EHF (ENSSCAG00000003728) #26 CPT1A (ENSSCAG00000003737) GAL (ENSSCAG00000003743) PPP6R3 (ENSSCAG00000003754) LRP5 (ENSSCAG00000003838) ENSSCAG00000004197 TSPAN4 (ENSSCAG00000004202) CHID1 (ENSSCAG00000004218) AP2A2 (ENSSCAG00000004230) MUC6 (ENSSCAG00000004242) MUC2 (ENSSCAG00000004268) Medium ground finch MODERN SPECIES 15 ENSGFOG00000006309 ALKBH3 (ENSGFOG00000006323) HSD17B12 (ENSGFOG00000006352) TTC17 (ENSGFOG00000006550) API5 (ENSGFOG00000006568) LRRC4C (ENSGFOG00000006584) #7 IFTAP (ENSGFOG00000006589) #11 RAG2 (ENSGFOG00000006600) #12 RAG1 (ENSGFOG00000006622) #13 TRAF6 (ENSGFOG00000006624) #14 PRR5L (ENSGFOG00000006629) #15 COMMD9 (ENSGFOG00000006633) #16 LDLRAD3 (ENSGFOG00000006635) #17 ENSGFOG00000006638 PAMR1 (ENSGFOG00000006647) #21 SLC1A2 (ENSGFOG00000006659) #22 CD44 (ENSGFOG00000006680) #23 PDHX (ENSGFOG00000006697) #24 APIP (ENSGFOG00000006731) #25 EHF (ENSGFOG00000006738) #26 CPT1A (ENSGFOG00000006742) GAL (ENSGFOG00000006756) PPP6R3 (ENSGFOG00000006764) LRP5 (ENSGFOG00000006798) ENSGFOG00000006815 KMT5B (ENSGFOG00000006819) CHKA (ENSGFOG00000006832) RNH1 (ENSGFOG00000006888) ENSGFOG00000006898 HRAS (ENSGFOG00000006911) LRRC56 (ENSGFOG00000006917) Flycatcher MODERN SPECIES 24 EXT2 (ENSFALG00000012307) ENSFALG00000012325 C11orf96 (ENSFALG00000026575) ENSFALG00000027931 HSD17B12 (ENSFALG00000012377) TTC17 (ENSFALG00000012400) API5 (ENSFALG00000012414) LRRC4C (ENSFALG00000014357) #7 IFTAP (ENSFALG00000012432) #11 RAG2 (ENSFALG00000014365) #12 RAG1 (ENSFALG00000014372) #13 TRAF6 (ENSFALG00000012435) #14 PRR5L (ENSFALG00000012439) #15 LDLRAD3 (ENSFALG00000025257) #17 PAMR1 (ENSFALG00000012457) #21 SLC1A2 (ENSFALG00000012468) #22 CD44 (ENSFALG00000027438) #23 PDHX (ENSFALG00000012525) #24 APIP (ENSFALG00000026708) #25 EHF (ENSFALG00000025387) #26 ENSFALG00000014378 #27 CPT1A (ENSFALG00000012570) GAL (ENSFALG00000012599) PPP6R3 (ENSFALG00000012628) ENSFALG00000026022 LRP5 (ENSFALG00000012674) ENSFALG00000027419 ENSFALG00000027659 ENSFALG00000012732 RNH1 (ENSFALG00000012757) ENSFALG00000012154 Neognathae_c ANCESTRAL SPECIES 6 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 Kakapo MODERN SPECIES 21 DEPDC7 (ENSSHBG00005011577) TCP11L1 (ENSSHBG00005011554) CSTF3 (ENSSHBG00005011527) HIPK3 (ENSSHBG00005011501) #37 C11orf91 (ENSSHBG00005011483) #35 KIAA1549L (ENSSHBG00005010654) #36 SPON1 (ENSSHBG00005010434) SYT9 (ENSSHBG00005010399) OLFML1 (ENSSHBG00005010210) TRAF6 (ENSSHBG00005010177) #14 COMMD9 (ENSSHBG00005000484) #16 LDLRAD3 (ENSSHBG00005000479) #17 PRR5L (ENSSHBG00005000473) #15 FJX1 (ENSSHBG00005000469) #20 PAMR1 (ENSSHBG00005019263) #21 SLC1A2 (ENSSHBG00005019261) #22 ENSSHBG00005019258 #23 PDHX (ENSSHBG00005019256) #24 APIP (ENSSHBG00005019255) #25 EHF (ENSSHBG00005019250) #26 ENSSHBG00005019246 LRP5 (ENSSHBG00005018446) PPP6R3 (ENSSHBG00005018403) GAL (ENSSHBG00005018399) CPT1A (ENSSHBG00005018397) PPFIBP2 (ENSSHBG00005017045) CYB5R2 (ENSSHBG00005016931) ENSSHBG00005016922 OVCH2 (ENSSHBG00005016900) FAR1 (ENSSHBG00005016880) ENSSHBG00005016876 Golden eagle MODERN SPECIES 11 ALKBH3 (ENSACCG00020004784) HSD17B12 (ENSACCG00020004804) TTC17 (ENSACCG00020004828) API5 (ENSACCG00020004854) LRRC4C (ENSACCG00020004870) #7 IFTAP (ENSACCG00020004876) #11 RAG1 (ENSACCG00020004891) #13 TRAF6 (ENSACCG00020004898) #14 PRR5L (ENSACCG00020004911) #15 COMMD9 (ENSACCG00020004925) #16 LDLRAD3 (ENSACCG00020004933) #17 FJX1 (ENSACCG00020004943) #20 ENSACCG00020004950 ENSACCG00020004954 PAMR1 (ENSACCG00020004986) #21 SLC1A2 (ENSACCG00020005008) #22 ENSACCG00020005027 #23 PDHX (ENSACCG00020005035) #24 APIP (ENSACCG00020005044) #25 EHF (ENSACCG00020005055) #26 ELF5 (ENSACCG00020005066) #27 ENSACCG00020005078 MAP4K3 (ENSACCG00020005104) SOS1 (ENSACCG00020005172) ARHGEF33 (ENSACCG00020005204) ENSACCG00020005217 DHX57 (ENSACCG00020005234) ENSACCG00020005259 GEMIN6 (ENSACCG00020005271) ENSACCG00020005280 GALM (ENSACCG00020005291) African ostrich MODERN SPECIES 1069 IFTAP (ENSSCUG00000018810) #11 RAG2 (ENSSCUG00000018809) #12 RAG1 (ENSSCUG00000018808) #13 TRAF6 (ENSSCUG00000018807) #14 PRR5L (ENSSCUG00000018806) #15 COMMD9 (ENSSCUG00000018804) #16 LDLRAD3 (ENSSCUG00000018802) #17 ENSSCUG00000018799 PAMR1 (ENSSCUG00000018797) #21 SLC1A2 (ENSSCUG00000018795) #22 CD44 (ENSSCUG00000018790) #23 PDHX (ENSSCUG00000018780) #24 APIP (ENSSCUG00000018778) #25 EHF (ENSSCUG00000018771) #26 ELF5 (ENSSCUG00000018767) #27 CAT (ENSSCUG00000018763) #28 ABTB2 (ENSSCUG00000018762) #29 NAT10 (ENSSCUG00000018760) #30 CAPRIN1 (ENSSCUG00000018759) #31 LMO2 (ENSSCUG00000018758) #32 FBXO3 (ENSSCUG00000018757) #33 CD59 (ENSSCUG00000018756) #34 ENSSCUG00000018752 ENSSCUG00000018751 SHANK2 (ENSSCUG00000018749) Australian saltwater crocodile MODERN SPECIES 64 ENSCPRG00005011338 ALKBH3 (ENSCPRG00005011323) HSD17B12 (ENSCPRG00005011319) TTC17 (ENSCPRG00005011263) API5 (ENSCPRG00005011242) LRRC4C (ENSCPRG00005011233) #7 IFTAP (ENSCPRG00005011211) #11 RAG2 (ENSCPRG00005011203) #12 RAG1 (ENSCPRG00005011199) #13 TRAF6 (ENSCPRG00005011195) #14 PRR5L (ENSCPRG00005011191) #15 COMMD9 (ENSCPRG00005011189) #16 LDLRAD3 (ENSCPRG00005011188) #17 TRIM44 (ENSCPRG00005011181) #19 PAMR1 (ENSCPRG00005011143) #21 SLC1A2 (ENSCPRG00005011036) #22 ENSCPRG00005011010 #23 ENSCPRG00005011008 #23 PDHX (ENSCPRG00005010991) #24 APIP (ENSCPRG00005010986) #25 EHF (ENSCPRG00005010982) #26 ELF5 (ENSCPRG00005010953) #27 CAT (ENSCPRG00005010950) #28 ABTB2 (ENSCPRG00005010800) #29 NAT10 (ENSCPRG00005010567) #30 CAPRIN1 (ENSCPRG00005009900) #31 LMO2 (ENSCPRG00005009849) #32 FBXO3 (ENSCPRG00005009845) #33 ENSCPRG00005009843 #34 ENSCPRG00005009826 ENSCPRG00005009819 Cryptodira ANCESTRAL SPECIES 3 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00960000189471 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Testudinoidea ANCESTRAL SPECIES 3 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361.l ENSGT00940000153561.b.a.a.b Emydidae ANCESTRAL SPECIES 2 ENSGT00990000212297 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361.l ENSGT00940000153561.b.a.a.b painted turtle MODERN SPECIES 13 ENSCPBG00000012573 HSD17B12 (ENSCPBG00000012572) TTC17 (ENSCPBG00000012566) API5 (ENSCPBG00000012564) LRRC4C (ENSCPBG00000012554) #7 IFTAP (ENSCPBG00000012548) #11 RAG2 (ENSCPBG00000012547) #12 RAG1 (ENSCPBG00000012546) #13 TRAF6 (ENSCPBG00000012545) #14 PRR5L (ENSCPBG00000012543) #15 COMMD9 (ENSCPBG00000012542) #16 LDLRAD3 (ENSCPBG00000012541) #17 TRIM44 (ENSCPBG00000012540) #19 FJX1 (ENSCPBG00000012539) #20 PAMR1 (ENSCPBG00000012537) #21 SLC1A2 (ENSCPBG00000012534) #22 CD44 (ENSCPBG00000012532) #23 PDHX (ENSCPBG00000012531) #24 APIP (ENSCPBG00000012530) #25 EHF (ENSCPBG00000012529) #26 ELF5 (ENSCPBG00000012528) #27 CAT (ENSCPBG00000012526) #28 ENSCPBG00000012525 #29 ENSCPBG00000012523 #29 NAT10 (ENSCPBG00000012518) #30 CAPRIN1 (ENSCPBG00000012511) #31 LMO2 (ENSCPBG00000012505) #32 FBXO3 (ENSCPBG00000012502) #33 CD59 (ENSCPBG00000012499) #34 ENSCPBG00000012497 ENSCPBG00000012493 Three-toed box turtle MODERN SPECIES 40 HSD17B12 (ENSTMTG00000009085) TTC17 (ENSTMTG00000009031) API5 (ENSTMTG00000008992) ENSTMTG00000008983 LRRC4C (ENSTMTG00000008975) #7 IFTAP (ENSTMTG00000008963) #11 RAG2 (ENSTMTG00000008953) #12 RAG1 (ENSTMTG00000008950) #13 TRAF6 (ENSTMTG00000008934) #14 PRR5L (ENSTMTG00000008916) #15 COMMD9 (ENSTMTG00000008903) #16 LDLRAD3 (ENSTMTG00000008894) #17 TRIM44 (ENSTMTG00000008878) #19 FJX1 (ENSTMTG00000008863) #20 PAMR1 (ENSTMTG00000008840) #21 SLC1A2 (ENSTMTG00000008810) #22 ENSTMTG00000008780 #23 PDHX (ENSTMTG00000008758) #24 APIP (ENSTMTG00000008745) #25 EHF (ENSTMTG00000008712) #26 ELF5 (ENSTMTG00000008674) #27 CAT (ENSTMTG00000008651) #28 ABTB2 (ENSTMTG00000008508) #29 NAT10 (ENSTMTG00000008472) #30 CAPRIN1 (ENSTMTG00000007967) #31 LMO2 (ENSTMTG00000007913) #32 FBXO3 (ENSTMTG00000007908) #33 ENSTMTG00000007897 CD59 (ENSTMTG00000007869) #34 ENSTMTG00000007815 ENSTMTG00000007801 Testudinidae ANCESTRAL SPECIES 2 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196.e ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361.l ENSGT00940000153561.b.a.a.b Goode s thornscrub tortoise MODERN SPECIES 18 HSD17B12 (ENSGEVG00005014144) TTC17 (ENSGEVG00005014269) API5 (ENSGEVG00005014961) ENSGEVG00005014999 LRRC4C (ENSGEVG00005015025) #7 IFTAP (ENSGEVG00005015044) #11 RAG2 (ENSGEVG00005015067) #12 RAG1 (ENSGEVG00005015081) #13 TRAF6 (ENSGEVG00005015114) #14 PRR5L (ENSGEVG00005015154) #15 COMMD9 (ENSGEVG00005015180) #16 LDLRAD3 (ENSGEVG00005015195) #17 TRIM44 (ENSGEVG00005015266) #19 FJX1 (ENSGEVG00005015321) #20 PAMR1 (ENSGEVG00005015366) #21 SLC1A2 (ENSGEVG00005015528) #22 CD44 (ENSGEVG00005015868) #23 PDHX (ENSGEVG00005015894) #24 APIP (ENSGEVG00005015935) #25 EHF (ENSGEVG00005015957) #26 ELF5 (ENSGEVG00005016024) #27 CAT (ENSGEVG00005016106) #28 ABTB2 (ENSGEVG00005016255) #29 NAT10 (ENSGEVG00005016611) #30 CAPRIN1 (ENSGEVG00005016756) #31 LMO2 (ENSGEVG00005017244) #32 FBXO3 (ENSGEVG00005017267) #33 CD59 (ENSGEVG00005017352) #34 ENSGEVG00005017369 ENSGEVG00005017411 ENSGEVG00005017454 Abingdon island giant tortoise MODERN SPECIES 2305 ENSCABG00000014605 IFTAP (ENSCABG00000014608) #11 RAG2 (ENSCABG00000014609) #12 RAG1 (ENSCABG00000014610) #13 TRAF6 (ENSCABG00000014612) #14 PRR5L (ENSCABG00000014615) #15 COMMD9 (ENSCABG00000014639) #16 LDLRAD3 (ENSCABG00000014643) #17 ENSCABG00000014653 TRIM44 (ENSCABG00000014655) #19 FJX1 (ENSCABG00000014656) #20 PAMR1 (ENSCABG00000014660) #21 SLC1A2 (ENSCABG00000014670) #22 ENSCABG00000015018 #23 Chinese turtle MODERN SPECIES 1173 ENSPSIG00000011281 ENSPSIG00000011275 ENSPSIG00000001824 LRRC4C (ENSPSIG00000001820) #7 ENSPSIG00000001816 ENSPSIG00000011231 IFTAP (ENSPSIG00000011179) #11 RAG2 (ENSPSIG00000001813) #12 RAG1 (ENSPSIG00000001811) #13 TRAF6 (ENSPSIG00000011001) #14 PRR5L (ENSPSIG00000010994) #15 COMMD9 (ENSPSIG00000010944) #16 LDLRAD3 (ENSPSIG00000010795) #17 ENSPSIG00000001807 #20 PAMR1 (ENSPSIG00000010368) #21 SLC1A2 (ENSPSIG00000010002) #22 CD44 (ENSPSIG00000009940) #23 PDHX (ENSPSIG00000009051) #24 APIP (ENSPSIG00000008991) #25 EHF (ENSPSIG00000008876) #26 ELF5 (ENSPSIG00000008866) #27 CAT (ENSPSIG00000007418) #28 ENSPSIG00000007397 ABTB2 (ENSPSIG00000009338) #29 NAT10 (ENSPSIG00000006469) #30 Lepidosauria ANCESTRAL SPECIES 10 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00940000157530.b ENSGT00730000111007.a.b ENSGT00940000164361 Episquamata ANCESTRAL SPECIES ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00940000157530.b ENSGT00730000111007.a.b ENSGT00940000164361 Laterata ANCESTRAL SPECIES 2 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000164361 ENSGT00940000153561.b.a.a.b Common wall lizard MODERN SPECIES ALKBH3 (ENSPMRG00000014811) HSD17B12 (ENSPMRG00000014818) TTC17 (ENSPMRG00000000104) API5 (ENSPMRG00000000132) LRRC4C (ENSPMRG00000000147) #7 ENSPMRG00000000162 RAG2 (ENSPMRG00000000173) #12 RAG1 (ENSPMRG00000000184) #13 ENSPMRG00000000199 PRR5L (ENSPMRG00000000221) #15 COMMD9 (ENSPMRG00000000266) #16 LDLRAD3 (ENSPMRG00000000306) #17 TRIM44 (ENSPMRG00000000331) #19 FJX1 (ENSPMRG00000000356) #20 PAMR1 (ENSPMRG00000000371) #21 SLC1A2 (ENSPMRG00000000412) #22 ENSPMRG00000000537 #23 ENSPMRG00000000735 #23 PDHX (ENSPMRG00000000757) #24 APIP (ENSPMRG00000000792) #25 EHF (ENSPMRG00000000817) #26 ENSPMRG00000000841 ELF5 (ENSPMRG00000000851) #27 ENSPMRG00000001009 #28 ENSPMRG00000001451 #28 ABTB2 (ENSPMRG00000001695) #29 NAT10 (ENSPMRG00000002034) #30 CAPRIN1 (ENSPMRG00000002292) #31 ENSPMRG00000002635 #32 FBXO3 (ENSPMRG00000002648) #33 ENSPMRG00000002662 #34 Argentine black and white tegu MODERN SPECIES 3 API5 (ENSSMRG00000004889) ENSSMRG00000004867 ENSSMRG00000004858 ENSSMRG00000004851 LRRC4C (ENSSMRG00000004842) #7 ENSSMRG00000004832 RAG2 (ENSSMRG00000004809) #12 RAG1 (ENSSMRG00000004802) #13 TRAF6 (ENSSMRG00000004731) #14 PRR5L (ENSSMRG00000004714) #15 COMMD9 (ENSSMRG00000004711) #16 LDLRAD3 (ENSSMRG00000004689) #17 TRIM44 (ENSSMRG00000004604) #19 FJX1 (ENSSMRG00000004580) #20 PAMR1 (ENSSMRG00000004579) #21 SLC1A2 (ENSSMRG00000004495) #22 ENSSMRG00000004484 #23 PDHX (ENSSMRG00000004403) #24 APIP (ENSSMRG00000004332) #25 EHF (ENSSMRG00000004321) #26 ELF5 (ENSSMRG00000004308) #27 CAT (ENSSMRG00000004301) #28 ABTB2 (ENSSMRG00000004293) #29 NAT10 (ENSSMRG00000004273) #30 CAPRIN1 (ENSSMRG00000004255) #31 LMO2 (ENSSMRG00000004237) #32 FBXO3 (ENSSMRG00000004236) #33 CD59 (ENSSMRG00000004233) #34 ENSSMRG00000004220 ENSSMRG00000004212 ENSSMRG00000004210 Toxicofera ANCESTRAL SPECIES 5 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100 #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00940000157530.b ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b Elapidae ANCESTRAL SPECIES 3 ENSGT00950000183478 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100.n #28 ENSGT00390000018100.m #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199.e #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.vc.b Elapidae_a ANCESTRAL SPECIES 4 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100.n #28 ENSGT00390000018100.m #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199.e #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.vc.b Acanthophiinae ANCESTRAL SPECIES 6 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00990000214222 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000157405 #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100.n #28 ENSGT00390000018100.m #28 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199.e #32 ENSGT00940000153571.b #33 ENSGT00390000016309 #34 ENSGT00730000111007.a.b ENSGT00940000153561.b.a.a.b.vc.b Mainland tiger snake MODERN SPECIES 9 HSD17B12 (ENSNSUG00000008872) ENSNSUG00000008873 TTC17 (ENSNSUG00000008875) API5 (ENSNSUG00000008963) ENSNSUG00000008964 LRRC4C (ENSNSUG00000008965) #7 ENSNSUG00000008966 RAG2 (ENSNSUG00000008967) #12 RAG1 (ENSNSUG00000008968) #13 TRAF6 (ENSNSUG00000008969) #14 PRR5L (ENSNSUG00000008970) #15 COMMD9 (ENSNSUG00000008978) #16 LDLRAD3 (ENSNSUG00000008979) #17 FJX1 (ENSNSUG00000008980) #20 PAMR1 (ENSNSUG00000008981) #21 SLC1A2 (ENSNSUG00000008983) #22 CD44 (ENSNSUG00000009221) #23 PDHX (ENSNSUG00000009222) #24 APIP (ENSNSUG00000009235) #25 EHF (ENSNSUG00000009236) #26 ELF5 (ENSNSUG00000009237) #27 ENSNSUG00000009259 #28 ENSNSUG00000009263 #28 ABTB2 (ENSNSUG00000009269) #29 NAT10 (ENSNSUG00000009284) #30 CAPRIN1 (ENSNSUG00000009334) #31 ENSNSUG00000010250 #32 FBXO3 (ENSNSUG00000010252) #33 CD59 (ENSNSUG00000010255) #34 ENSNSUG00000010256 SHANK2 (ENSNSUG00000010257) Eastern brown snake MODERN SPECIES 1 ENSPTXG00000008692 C11orf96 (ENSPTXG00000008691) ALKBH3 (ENSPTXG00000008690) ENSPTXG00000008689 TTC17 (ENSPTXG00000008686) API5 (ENSPTXG00000008685) LRRC4C (ENSPTXG00000008684) #7 RAG2 (ENSPTXG00000008683) #12 RAG1 (ENSPTXG00000008682) #13 TRAF6 (ENSPTXG00000008681) #14 PRR5L (ENSPTXG00000008680) #15 COMMD9 (ENSPTXG00000008679) #16 LDLRAD3 (ENSPTXG00000008678) #17 FJX1 (ENSPTXG00000008677) #20 PAMR1 (ENSPTXG00000008676) #21 SLC1A2 (ENSPTXG00000008672) #22 CD44 (ENSPTXG00000008671) #23 PDHX (ENSPTXG00000008669) #24 APIP (ENSPTXG00000008668) #25 EHF (ENSPTXG00000008667) #26 ELF5 (ENSPTXG00000008666) #27 ENSPTXG00000007368 #28 ENSPTXG00000007359 #28 ABTB2 (ENSPTXG00000007354) #29 NAT10 (ENSPTXG00000007352) #30 CAPRIN1 (ENSPTXG00000007350) #31 LMO2 (ENSPTXG00000007349) #32 FBXO3 (ENSPTXG00000007348) #33 CD59 (ENSPTXG00000007347) #34 ENSPTXG00000007345 SHANK2 (ENSPTXG00000007344) Blue-lipped sea krait MODERN SPECIES 7098 SLC1A2 (ENSLLTG00000005810) #22 Indian cobra MODERN SPECIES C11orf96 (ENSNNAG00000010307) ALKBH3 (ENSNNAG00000010286) HSD17B12 (ENSNNAG00000010264) TTC17 (ENSNNAG00000009255) API5 (ENSNNAG00000009155) LRRC4C (ENSNNAG00000009141) #7 RAG2 (ENSNNAG00000009131) #12 RAG1 (ENSNNAG00000009122) #13 TRAF6 (ENSNNAG00000009096) #14 ENSNNAG00000009086 PRR5L (ENSNNAG00000008974) #15 COMMD9 (ENSNNAG00000008937) #16 LDLRAD3 (ENSNNAG00000008866) #17 ENSNNAG00000008809 PAMR1 (ENSNNAG00000008663) #21 SLC1A2 (ENSNNAG00000008116) #22 ENSNNAG00000008038 #23 PDHX (ENSNNAG00000007989) #24 APIP (ENSNNAG00000007952) #25 EHF (ENSNNAG00000007936) #26 ELF5 (ENSNNAG00000007913) #27 ENSNNAG00000007866 #28 ENSNNAG00000007572 #28 ABTB2 (ENSNNAG00000007462) #29 NAT10 (ENSNNAG00000007401) #30 CAPRIN1 (ENSNNAG00000007267) #31 LMO2 (ENSNNAG00000007220) #32 FBXO3 (ENSNNAG00000007197) #33 CD59 (ENSNNAG00000007176) #34 ENSNNAG00000007168 SHANK2 (ENSNNAG00000006944) Lizard MODERN SPECIES ENSACAG00000044911 ENSACAG00000045231 RAG2 (ENSACAG00000005102) #12 RAG1 (ENSACAG00000005106) #13 TRAF6 (ENSACAG00000040141) #14 PRR5L (ENSACAG00000005141) #15 COMMD9 (ENSACAG00000043977) #16 LDLRAD3 (ENSACAG00000005180) #17 ENSACAG00000038756 ENSACAG00000039043 ENSACAG00000042401 ENSACAG00000044094 TRIM44 (ENSACAG00000028675) #19 ENSACAG00000004544 #21 ENSACAG00000041619 #21 SLC1A2 (ENSACAG00000004365) #22 ENSACAG00000044506 #23 ENSACAG00000036690 #23 ENSACAG00000016081 FGF3 (ENSACAG00000040483) FGF4 (ENSACAG00000036069) FGF19 (ENSACAG00000016055) LTO1 (ENSACAG00000016039) CCND1 (ENSACAG00000016001) ENSACAG00000034646 ENSACAG00000042512 ENSACAG00000040695 TPCN2 (ENSACAG00000015933) ENSACAG00000015847 ENSACAG00000044329 ENSACAG00000015826 tuatara MODERN SPECIES 1380 IFTAP (ENSSPUG00000019089) #11 RAG2 (ENSSPUG00000019087) #12 TRAF6 (ENSSPUG00000019081) #14 PRR5L (ENSSPUG00000019066) #15 COMMD9 (ENSSPUG00000019054) #16 LDLRAD3 (ENSSPUG00000019047) #17 TRIM44 (ENSSPUG00000019027) #19 ENSSPUG00000019019 FJX1 (ENSSPUG00000019016) #20 PAMR1 (ENSSPUG00000019008) #21 SLC1A2 (ENSSPUG00000018993) #22 CD44 (ENSSPUG00000018978) #23 PDHX (ENSSPUG00000018966) #24 APIP (ENSSPUG00000018960) #25 EHF (ENSSPUG00000018942) #26 ELF5 (ENSSPUG00000018927) #27 CAT (ENSSPUG00000018915) #28 Anura ANCESTRAL SPECIES 85 ENSGT00940000157405 #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00390000006218 #16 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000160980 #27 ENSGT00390000018100.e.a #28 ENSGT00390000018100.f #28 ENSGT00390000018100.e.b #28 ENSGT00390000012739 ENSGT00940000157661 #29 ENSGT00390000009140 #30 ENSGT00940000153438.a #31 ENSGT00940000160199 #32 ENSGT00940000153571.b #33 ENSGT00940000157530.b Frog MODERN SPECIES 4 tspan18 (ENSXETG00000022236) cd82 (ENSXETG00000022237) alx4 (ENSXETG00000007545) ext2 (ENSXETG00000007546) iftap (ENSXETG00000032018) #11 rag2 (ENSXETG00000007547) #12 RAG1 (ENSXETG00000044054) #13 traf6 (ENSXETG00000007549) #14 prr5l (ENSXETG00000031096) #15 commd9 (ENSXETG00000007551) #16 ldlrad3 (ENSXETG00000007552) #17 trim44 (ENSXETG00000007553) #19 ENSXETG00000047544 fjx1 (ENSXETG00000047230) #20 pamr1 (ENSXETG00000007554) #21 slc1a2 (ENSXETG00000007555) #22 cd44 (ENSXETG00000007556) #23 pdhx (ENSXETG00000007557) #24 apip (ENSXETG00000007558) #25 ehf (ENSXETG00000007559) #26 elf5 (ENSXETG00000007560) #27 cat.1 (ENSXETG00000007561) #28 cat.3 (ENSXETG00000048405) #28 pacsin3 (ENSXETG00000005090) lrp4 (ENSXETG00000005091) XB5902317 [provisional:ces1c] (ENSXETG00000026362) ENSXETG00000047305 arfgap2 (ENSXETG00000005097) ENSXETG00000040384 ENSXETG00000035346 ENSXETG00000047843 Leishan spiny toad MODERN SPECIES 1 ENSLLEG00000009534 ENSLLEG00000009561 ENSLLEG00000009570 LRRC4C (ENSLLEG00000009590) #7 ENSLLEG00000009607 RAG2 (ENSLLEG00000009665) #12 ENSLLEG00000009788 ENSLLEG00000010055 RAG1 (ENSLLEG00000010191) #13 TRAF6 (ENSLLEG00000010210) #14 LDLRAD3 (ENSLLEG00000010313) #17 COMMD9 (ENSLLEG00000010716) #16 ENSLLEG00000010899 #19 FJX1 (ENSLLEG00000010928) #20 PAMR1 (ENSLLEG00000010981) #21 SLC1A2 (ENSLLEG00000011047) #22 ENSLLEG00000011426 ENSLLEG00000011445 #23 PDHX (ENSLLEG00000011523) #24 APIP (ENSLLEG00000011647) #25 EHF (ENSLLEG00000011712) #26 ELF5 (ENSLLEG00000011938) #27 ENSLLEG00000012598 #28 ENSLLEG00000013903 #28 ENSLLEG00000014425 #28 TFIP11 (ENSLLEG00000014659) ABTB2 (ENSLLEG00000015006) #29 NAT10 (ENSLLEG00000015462) #30 ENSLLEG00000016074 #31 LMO2 (ENSLLEG00000016952) #32 FBXO3 (ENSLLEG00000017030) #33 Coelacanth MODERN SPECIES 971 COMMD9 (ENSLACG00000014237) #16 LDLRAD3 (ENSLACG00000013807) #17 TRIM44 (ENSLACG00000013059) #19 FJX1 (ENSLACG00000012965) #20 PAMR1 (ENSLACG00000012516) #21 SLC1A2 (ENSLACG00000012033) #22 ENSLACG00000011662 #23 PDHX (ENSLACG00000010390) #24 APIP (ENSLACG00000009971) #25 EHF (ENSLACG00000009448) #26 ELF5 (ENSLACG00000008561) #27 CAT (ENSLACG00000007851) #28 ABTB2 (ENSLACG00000005390) #29 NAT10 (ENSLACG00000004636) #30 CAPRIN1 (ENSLACG00000003386) #31 ENSLACG00000002240 LMO2 (ENSLACG00000001942) #32 FBXO3 (ENSLACG00000000811) #33 Actinopterygii ANCESTRAL SPECIES 400 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 Reedfish MODERN SPECIES 581 slc1a2a (ENSECRG00000021405) #22 ENSECRG00000021420 rag2 (ENSECRG00000021445) #12 ENSECRG00000021462 #11 Neopterygii ANCESTRAL SPECIES 191 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a #21 ENSGT00940000155379 #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00390000001680 #25 ENSGT00940000159310 #26 ENSGT00940000157405 #7 ENSGT00390000013149 #11 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860 ENSGT00390000006196 ENSGT00390000010991 ENSGT00940000155426 #14 Spotted gar MODERN SPECIES 666 phlda2 (ENSLOCG00000017319) slc22a18 (ENSLOCG00000001662) OSBPL5 (ENSLOCG00000001627) ENSLOCG00000001607 PTPN5 (ENSLOCG00000001577) dusp8a (ENSLOCG00000001567) mob2a (ENSLOCG00000001539) ascl1b (ENSLOCG00000017318) syt12 (ENSLOCG00000001528) ighmbp2 (ENSLOCG00000001512) mrpl21 (ENSLOCG00000001501) ENSLOCG00000001491 LDLRAD3 (ENSLOCG00000001462) #17 FJX1 (ENSLOCG00000017317) #20 PAMR1 (ENSLOCG00000001426) #21 slc1a2a (ENSLOCG00000001388) #22 ENSLOCG00000001378 #23 pdhx (ENSLOCG00000001356) #24 apip (ENSLOCG00000001341) #25 ehf (ENSLOCG00000001316) #26 lrrc4ca (ENSLOCG00000017316) #7 IFTAP (ENSLOCG00000001297) #11 rag2 (ENSLOCG00000017315) #12 rag1 (ENSLOCG00000001283) #13 ENSLOCG00000001253 si:ch1073-281m9.1 (ENSLOCG00000017314) alkbh3 (ENSLOCG00000001237) hsd17b12a (ENSLOCG00000001197) ttc17 (ENSLOCG00000001159) api5 (ENSLOCG00000001136) traf6 (ENSLOCG00000001118) #14 Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 773 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 213 ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000163916 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768.i #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.a.a #22 ENSGT00940000155379.g.a.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860.a.b ENSGT00390000006196 ENSGT00390000010991.w Asian bonytongue MODERN SPECIES 20 B4GALNT4 (ENSSFOG00015002771) ABTB2 (ENSSFOG00015002829) #29 BRSK2 (ENSSFOG00015002907) LDHA (ENSSFOG00015002979) tsg101a (ENSSFOG00015003010) hrasb (ENSSFOG00015003051) LRRC56 (ENSSFOG00015003086) RASSF7 (ENSSFOG00015003103) ENSSFOG00015003125 irf7 (ENSSFOG00015003141) ascl1b (ENSSFOG00015027533) ENSSFOG00015003152 trim44 (ENSSFOG00015027942) #19 FJX1 (ENSSFOG00015026938) #20 PAMR1 (ENSSFOG00015003188) #21 SLC1A2 (ENSSFOG00015003213) #22 ENSSFOG00015030127 pdhx (ENSSFOG00015003249) #24 ehf (ENSSFOG00015003297) #26 lrrc4ca (ENSSFOG00015003324) #7 ENSSFOG00015003335 rag2 (ENSSFOG00015003344) #12 rag1 (ENSSFOG00015003379) #13 ENSSFOG00015003410 si:ch1073-281m9.1 (ENSSFOG00015028988) alkbh3 (ENSSFOG00015003566) hsd17b12a (ENSSFOG00015003574) ttc17 (ENSSFOG00015003612) api5 (ENSSFOG00015003750) traf6 (ENSSFOG00015003763) #14 PRR5L (ENSSFOG00015003782) #15 P. kingsleyae MODERN SPECIES 38 BRSK2 (ENSPKIG00000000472) LDHA (ENSPKIG00000000398) ENSPKIG00000000356 ENSPKIG00000000316 HRAS (ENSPKIG00000000303) LRRC56 (ENSPKIG00000000287) RASSF7 (ENSPKIG00000000264) ENSPKIG00000000215 ENSPKIG00000000183 irf7 (ENSPKIG00000000159) ascl1b (ENSPKIG00000000148) LDLRAD3 (ENSPKIG00000000134) #17 trim44 (ENSPKIG00000000119) #19 FJX1 (ENSPKIG00000000110) #20 PAMR1 (ENSPKIG00000000097) #21 SLC1A2 (ENSPKIG00000000071) #22 ENSPKIG00000022003 #23 pdhx (ENSPKIG00000021977) #24 ehf (ENSPKIG00000021956) #26 lrrc4ca (ENSPKIG00000021948) #7 ENSPKIG00000021938 rag2 (ENSPKIG00000021925) #12 rag1 (ENSPKIG00000021898) #13 ENSPKIG00000021875 ENSPKIG00000021855 alkbh3 (ENSPKIG00000021815) hsd17b12a (ENSPKIG00000021773) ttc17 (ENSPKIG00000021708) api5 (ENSPKIG00000021667) traf6 (ENSPKIG00000021640) #14 PRR5L (ENSPKIG00000021622) #15 Osteoglossiformes ANCESTRAL SPECIES 213 ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000163916 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768.i #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.a.a #22 ENSGT00940000155379.g.a.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860.a.b ENSGT00390000006196 ENSGT00390000010991.w ENSGT00940000155426 #14 Asian bonytongue MODERN SPECIES 2 NAP1L4 (ENSSFOG00015011392) igf2b (ENSSFOG00015029596) ENSSFOG00015011350 B4GALNT4 (ENSSFOG00015011329) ABTB2 (ENSSFOG00015011282) #29 BRSK2 (ENSSFOG00015011235) ldha (ENSSFOG00015011210) tsg101a (ENSSFOG00015011182) ENSSFOG00015011157 rassf7b (ENSSFOG00015027069) ENSSFOG00015026690 ENSSFOG00015025499 ldlrad3 (ENSSFOG00015026744) FJX1 (ENSSFOG00015032074) #20 ENSSFOG00015028363 slc1a2a (ENSSFOG00015011028) #22 ENSSFOG00015028482 #23 apip (ENSSFOG00015033345) #25 LRRC4C (ENSSFOG00015011001) #7 hsd17b12b (ENSSFOG00015010984) ENSSFOG00015010926 #14 ENSSFOG00015010953 FCSK (ENSSFOG00015010882) trpm5 (ENSSFOG00015010837) cdkn1ca (ENSSFOG00015024372) ENSSFOG00015010788 ENSSFOG00015027106 lingo1b (ENSSFOG00015010766) snx33 (ENSSFOG00015010748) sin3aa (ENSSFOG00015010655) crabp1a (ENSSFOG00015010613) P. kingsleyae MODERN SPECIES 12 OSBPL5 (ENSPKIG00000014169) slc22a18 (ENSPKIG00000014108) phlda2 (ENSPKIG00000014074) NAP1L4 (ENSPKIG00000013990) ENSPKIG00000013936 ENSPKIG00000013906 B4GALNT4 (ENSPKIG00000013857) ABTB2 (ENSPKIG00000013765) #29 BRSK2 (ENSPKIG00000013692) ENSPKIG00000013662 ldha (ENSPKIG00000013627) ENSPKIG00000013539 hrasb (ENSPKIG00000013507) rassf7b (ENSPKIG00000013492) ascl1b (ENSPKIG00000013472) slc1a2a (ENSPKIG00000013432) #22 apip (ENSPKIG00000013406) #25 ENSPKIG00000013392 zgc:64002 (ENSPKIG00000013377) LRRC4C (ENSPKIG00000013366) #7 HSD17B12 (ENSPKIG00000013315) ENSPKIG00000013292 ENSPKIG00000013285 ENSPKIG00000013261 #14 FCSK (ENSPKIG00000013172) trpm5 (ENSPKIG00000012994) cdkn1ca (ENSPKIG00000012930) kcnq1.1 (ENSPKIG00000012902) ENSPKIG00000012888 lingo1b (ENSPKIG00000012885) snx33 (ENSPKIG00000012874) Clupeocephala ANCESTRAL SPECIES 366 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00530000063981.b #15 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b Euteleosteomorpha ANCESTRAL SPECIES 211 ENSGT00390000007681.b.a.a ENSGT00530000063074.b.a ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00390000014757 ENSGT00940000158287 ENSGT00940000157089.B ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b Acanthomorphata ANCESTRAL SPECIES 79 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Euacanthomorphacea ANCESTRAL SPECIES 46 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Tiger tail seahorse MODERN SPECIES 348 ENSHCOG00000019497 dnd1 (ENSHCOG00000019493) ENSHCOG00000019481 ENSHCOG00000019465 ENSHCOG00000019458 ENSHCOG00000019454 ENSHCOG00000019451 ENSHCOG00000019438 ENSHCOG00000019418 ENSHCOG00000000517 ENSHCOG00000019389 ENSHCOG00000019388 ENSHCOG00000019385 chst1 (ENSHCOG00000019379) slc35c1 (ENSHCOG00000019372) slc1a2a (ENSHCOG00000019359) #22 apip (ENSHCOG00000019340) #25 LRRC4C (ENSHCOG00000019314) #7 ENSHCOG00000019307 hsd17b12b (ENSHCOG00000019286) ttc17 (ENSHCOG00000019251) traf6 (ENSHCOG00000019132) #14 trpm5 (ENSHCOG00000019120) ENSHCOG00000019037 kcnq1.1 (ENSHCOG00000019025) lingo1b (ENSHCOG00000018962) luzp2 (ENSHCOG00000018948) ENSHCOG00000018917 ENSHCOG00000018907 fibinb (ENSHCOG00000018902) bbox1 (ENSHCOG00000018889) Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00940000181004 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Anabantaria ANCESTRAL SPECIES 11 ENSGT00940000181004 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Anabantoidei ANCESTRAL SPECIES 8 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Climbing perch MODERN SPECIES 16 NAV2 (ENSATEG00000021634) dbx1a (ENSATEG00000021616) htatip2 (ENSATEG00000021609) prmt3 (ENSATEG00000021598) slc6a5 (ENSATEG00000021586) ENSATEG00000021560 NELL1 (ENSATEG00000021543) ENSATEG00000021458 ENSATEG00000021428 ENSATEG00000021394 ENSATEG00000028460 ENSATEG00000021366 ENSATEG00000021360 ENSATEG00000030098 ENSATEG00000029077 slc1a2a (ENSATEG00000021313) #22 APIP (ENSATEG00000027665) #25 LRRC4C (ENSATEG00000021299) #7 hsd17b12b (ENSATEG00000021238) ENSATEG00000027497 ttc17 (ENSATEG00000021172) ENSATEG00000021148 #14 trpm5 (ENSATEG00000021113) ENSATEG00000021085 ENSATEG00000021061 ENSATEG00000021055 ENSATEG00000021036 ENSATEG00000021010 fibinb (ENSATEG00000020997) bbox1 (ENSATEG00000020990) ENSATEG00000020830 Siamese fighting fish MODERN SPECIES 14 ENSBSLG00000004079 HERC1 (ENSBSLG00000004100) ENSBSLG00000004779 ZNF710 (ENSBSLG00000004830) idh2 (ENSBSLG00000004876) si:ch211-107o10.3 (ENSBSLG00000005247) RASGRF1 (ENSBSLG00000005365) wdr76 (ENSBSLG00000005796) FRMD5 (ENSBSLG00000006671) lrp4 (ENSBSLG00000007912) ENSBSLG00000008692 A3GALT2 (ENSBSLG00000008699) ENSBSLG00000008955 ENSBSLG00000009050 slc35c1 (ENSBSLG00000009076) slc1a2a (ENSBSLG00000009104) #22 apip (ENSBSLG00000009527) #25 LRRC4C (ENSBSLG00000009547) #7 hsd17b12b (ENSBSLG00000009741) ttc17 (ENSBSLG00000010086) traf6 (ENSBSLG00000010440) #14 trpm5 (ENSBSLG00000010445) ENSBSLG00000010478 KCNQ1 (ENSBSLG00000010746) lingo1b (ENSBSLG00000011592) luzp2 (ENSBSLG00000011625) ENSBSLG00000011712 fibinb (ENSBSLG00000011752) bbox1 (ENSBSLG00000011770) MADD (ENSBSLG00000011850) nr1h3 (ENSBSLG00000012270) Zig-zag eel MODERN SPECIES 17 NAV2 (ENSMAMG00000015959) ENSMAMG00000016183 dbx1a (ENSMAMG00000015940) htatip2 (ENSMAMG00000015926) prmt3 (ENSMAMG00000015896) slc6a5 (ENSMAMG00000015848) NELL1 (ENSMAMG00000015789) ENSMAMG00000015820 ENSMAMG00000015657 ENSMAMG00000015633 ENSMAMG00000015594 ENSMAMG00000015588 ENSMAMG00000015586 ENSMAMG00000025042 ENSMAMG00000015550 #21 slc1a2a (ENSMAMG00000015526) #22 apip (ENSMAMG00000015506) #25 ENSMAMG00000015494 #7 ENSMAMG00000025683 hsd17b12b (ENSMAMG00000015426) ttc17 (ENSMAMG00000015309) ENSMAMG00000027515 #14 trpm5 (ENSMAMG00000015080) ENSMAMG00000015050 kcnq1.1 (ENSMAMG00000015000) ENSMAMG00000014980 ENSMAMG00000014960 ENSMAMG00000014935 fibinb (ENSMAMG00000014913) bbox1 (ENSMAMG00000014900) ENSMAMG00000014662 Carangaria ANCESTRAL SPECIES 11 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Pleuronectoidei ANCESTRAL SPECIES 39 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Turbot MODERN SPECIES 17 dbx1a (ENSSMAG00000023716) htatip2 (ENSSMAG00000008235) ENSSMAG00000008258 prmt3 (ENSSMAG00000008265) slc6a5 (ENSSMAG00000008312) NELL1 (ENSSMAG00000008339) ENSSMAG00000008480 ENSSMAG00000008497 ENSSMAG00000008605 ENSSMAG00000008616 ENSSMAG00000008677 ENSSMAG00000008698 ENSSMAG00000008702 ENSSMAG00000029408 ENSSMAG00000008725 #21 slc1a2a (ENSSMAG00000008734) #22 apip (ENSSMAG00000008751) #25 hsd17b12b (ENSSMAG00000008774) ttc17 (ENSSMAG00000008833) TRAF6 (ENSSMAG00000008957) #14 trpm5 (ENSSMAG00000008987) ENSSMAG00000009130 kcnq1.1 (ENSSMAG00000009139) ENSSMAG00000024216 ENSSMAG00000009190 ENSSMAG00000009214 ENSSMAG00000009222 bbox1 (ENSSMAG00000009232) ENSSMAG00000009245 nr1h3 (ENSSMAG00000009312) ENSSMAG00000009335 Tongue sole MODERN SPECIES 15 ano5b (ENSCSEG00000002239) slc17a6b (ENSCSEG00000002260) GAS2 (ENSCSEG00000002394) lrp4 (ENSCSEG00000002418) ENSCSEG00000002484 ENSCSEG00000002488 ENSCSEG00000002491 ENSCSEG00000002493 A3GALT2 (ENSCSEG00000002498) ENSCSEG00000002517 MAPK8IP1 (ENSCSEG00000002524) ENSCSEG00000002538 chst1 (ENSCSEG00000002539) KLHL10 (ENSCSEG00000002543) slc35c1 (ENSCSEG00000002963) slc1a2a (ENSCSEG00000002968) #22 apip (ENSCSEG00000002980) #25 LRRC4C (ENSCSEG00000002984) #7 bbox1 (ENSCSEG00000002986) fibinb (ENSCSEG00000002993) ENSCSEG00000002996 luzp2 (ENSCSEG00000003000) lingo1b (ENSCSEG00000003013) kcnq1.1 (ENSCSEG00000003017) ENSCSEG00000003033 trpm5 (ENSCSEG00000003046) traf6 (ENSCSEG00000003098) #14 ttc17 (ENSCSEG00000003111) hsd17b12b (ENSCSEG00000003169) ENSCSEG00000003179 ENSCSEG00000003192 Carangaria_A ANCESTRAL SPECIES 19 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Seriola ANCESTRAL SPECIES 30 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00940000157089.B ENSGT00940000163916 ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Greater amberjack MODERN SPECIES 3 dbx1a (ENSSDUG00000016225) htatip2 (ENSSDUG00000016210) prmt3 (ENSSDUG00000016148) slc6a5 (ENSSDUG00000016016) ENSSDUG00000015990 ENSSDUG00000015986 NELL1 (ENSSDUG00000015920) lrp4 (ENSSDUG00000015763) MAPK8IP1 (ENSSDUG00000015714) ENSSDUG00000015701 ENSSDUG00000015638 ENSSDUG00000015619 chst1 (ENSSDUG00000015618) slc35c1 (ENSSDUG00000015611) ENSSDUG00000015599 #21 slc1a2a (ENSSDUG00000015573) #22 apip (ENSSDUG00000015532) #25 LRRC4C (ENSSDUG00000015521) #7 hsd17b12b (ENSSDUG00000015488) ttc17 (ENSSDUG00000015381) traf6 (ENSSDUG00000015351) #14 trpm5 (ENSSDUG00000015291) ENSSDUG00000015273 kcnq1.1 (ENSSDUG00000015239) lingo1b (ENSSDUG00000015230) luzp2 (ENSSDUG00000015214) ENSSDUG00000015203 bbox1 (ENSSDUG00000015176) MADD (ENSSDUG00000014979) nr1h3 (ENSSDUG00000014901) arl14ep (ENSSDUG00000014885) Yellowtail amberjack MODERN SPECIES 2699 MAPK8IP1 (ENSSLDG00000004194) ENSSLDG00000004158 ENSSLDG00000004141 ENSSLDG00000004126 chst1 (ENSSLDG00000004108) slc35c1 (ENSSLDG00000004092) PAMR1 (ENSSLDG00000004029) #21 slc1a2a (ENSSLDG00000003966) #22 apip (ENSSLDG00000003944) #25 Barramundi perch MODERN SPECIES 96 dbx1a (ENSLCAG00010017904) htatip2 (ENSLCAG00010017906) prmt3 (ENSLCAG00010017909) slc6a5 (ENSLCAG00010017918) NELL1 (ENSLCAG00010017942) ENSLCAG00010017973 lrp4 (ENSLCAG00010018047) ENSLCAG00010018289 MAPK8IP1 (ENSLCAG00010018292) ENSLCAG00010018298 ENSLCAG00010018301 ENSLCAG00010018302 chst1 (ENSLCAG00010018305) slc35c1 (ENSLCAG00010018307) ENSLCAG00010018310 #21 slc1a2a (ENSLCAG00010018316) #22 apip (ENSLCAG00010018323) #25 LRRC4C (ENSLCAG00010018337) #7 ENSLCAG00010018339 hsd17b12b (ENSLCAG00010018345) ttc17 (ENSLCAG00010018377) traf6 (ENSLCAG00010018578) #14 trpm5 (ENSLCAG00010018591) ENSLCAG00010018606 KCNQ1 (ENSLCAG00010018620) lingo1b (ENSLCAG00010018637) luzp2 (ENSLCAG00010018641) ENSLCAG00010018646 fibinb (ENSLCAG00010018649) bbox1 (ENSLCAG00010018651) MADD (ENSLCAG00010018725) Eupercaria ANCESTRAL SPECIES 14 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Fugu MODERN SPECIES 4 csrp3 (ENSTRUG00000015766) e2f8 (ENSTRUG00000015792) NAV2 (ENSTRUG00000027383) dbx1a (ENSTRUG00000015886) htatip2 (ENSTRUG00000015893) prmt3 (ENSTRUG00000015904) slc6a5 (ENSTRUG00000015944) NELL1 (ENSTRUG00000016017) ENSTRUG00000020682 ENSTRUG00000016170 MAPK8IP1 (ENSTRUG00000021709) ENSTRUG00000016184 chst1 (ENSTRUG00000016194) slc35c1 (ENSTRUG00000022396) ENSTRUG00000016200 #21 slc1a2a (ENSTRUG00000016239) #22 apip (ENSTRUG00000016253) #25 LRRC4C (ENSTRUG00000016255) #7 ENSTRUG00000032668 hsd17b12b (ENSTRUG00000016257) ttc17 (ENSTRUG00000016281) traf6 (ENSTRUG00000016306) #14 trpm5 (ENSTRUG00000016316) ENSTRUG00000022458 kcnq1.1 (ENSTRUG00000016351) lingo1b (ENSTRUG00000016358) luzp2 (ENSTRUG00000025811) ENSTRUG00000024372 fibinb (ENSTRUG00000016362) bbox1 (ENSTRUG00000016364) MADD (ENSTRUG00000016367) Tetraodon MODERN SPECIES 20 csrp3 (ENSTNIG00000009616) e2f8 (ENSTNIG00000009615) NAV2 (ENSTNIG00000009614) dbx1a (ENSTNIG00000009613) htatip2 (ENSTNIG00000009612) prmt3 (ENSTNIG00000009611) slc6a5 (ENSTNIG00000009610) NELL1 (ENSTNIG00000009609) lrp4 (ENSTNIG00000009608) ENSTNIG00000000788 MAPK8IP1 (ENSTNIG00000009607) ENSTNIG00000009606 chst1 (ENSTNIG00000009605) slc35c1 (ENSTNIG00000009604) ENSTNIG00000009603 #21 slc1a2a (ENSTNIG00000009602) #22 apip (ENSTNIG00000009601) #25 LRRC4C (ENSTNIG00000009600) #7 hsd17b12b (ENSTNIG00000009599) ttc17 (ENSTNIG00000009598) traf6 (ENSTNIG00000009597) #14 trpm5 (ENSTNIG00000009596) kcnq1.1 (ENSTNIG00000009595) lingo1b (ENSTNIG00000009594) fibinb (ENSTNIG00000009593) bbox1 (ENSTNIG00000009592) MADD (ENSTNIG00000009591) nr1h3 (ENSTNIG00000009590) arl14ep (ENSTNIG00000009589) ENSTNIG00000009588 KCNA4 (ENSTNIG00000009587) Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Ballan wrasse MODERN SPECIES 286 MAPK8IP1 (ENSLBEG00000019704) ENSLBEG00000019689 ENSLBEG00000019598 ENSLBEG00000019565 chst1 (ENSLBEG00000019555) slc35c1 (ENSLBEG00000019538) PAMR1 (ENSLBEG00000019518) #21 slc1a2a (ENSLBEG00000019487) #22 apip (ENSLBEG00000019459) #25 Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Perciformes ANCESTRAL SPECIES 15 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Cottioidei ANCESTRAL SPECIES 13 ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Stickleback MODERN SPECIES 1 mpped2a (ENSGACG00000017073) zdhhc13 (ENSGACG00000017075) csrp3 (ENSGACG00000017082) e2f8 (ENSGACG00000017086) NAV2 (ENSGACG00000017087) htatip2 (ENSGACG00000017092) prmt3 (ENSGACG00000017094) slc6a5 (ENSGACG00000017096) NELL1 (ENSGACG00000017098) lrp4 (ENSGACG00000017100) A3GALT2 (ENSGACG00000017105) MAPK8IP1 (ENSGACG00000017110) ENSGACG00000017112 chst1 (ENSGACG00000017115) slc35c1 (ENSGACG00000017116) slc1a2a (ENSGACG00000017121) #22 ENSGACG00000017123 apip (ENSGACG00000017125) #25 LRRC4C (ENSGACG00000017129) #7 hsd17b12b (ENSGACG00000017131) ttc17 (ENSGACG00000017137) traf6 (ENSGACG00000017142) #14 trpm5 (ENSGACG00000017149) kcnq1.1 (ENSGACG00000017155) lingo1b (ENSGACG00000017157) luzp2 (ENSGACG00000017158) ENSGACG00000017159 ENSGACG00000017160 fibinb (ENSGACG00000017161) bbox1 (ENSGACG00000017162) MADD (ENSGACG00000017165) Lumpfish MODERN SPECIES 18 csrp3 (ENSCLMG00005022611) e2f8 (ENSCLMG00005022617) NAV2 (ENSCLMG00005022639) dbx1a (ENSCLMG00005022679) htatip2 (ENSCLMG00005022680) prmt3 (ENSCLMG00005022681) slc6a5 (ENSCLMG00005022683) NELL1 (ENSCLMG00005000055) ENSCLMG00005000542 lrp4 (ENSCLMG00005000551) A3GALT2 (ENSCLMG00005000561) MAPK8IP1 (ENSCLMG00005000568) ENSCLMG00005000620 slc35c1 (ENSCLMG00005000644) PAMR1 (ENSCLMG00005000650) #21 slc1a2a (ENSCLMG00005000655) #22 apip (ENSCLMG00005000659) #25 LRRC4C (ENSCLMG00005000661) #7 ENSCLMG00005000663 hsd17b12b (ENSCLMG00005000666) ttc17 (ENSCLMG00005000667) traf6 (ENSCLMG00005000677) #14 trpm5 (ENSCLMG00005000684) ENSCLMG00005000686 kcnq1.1 (ENSCLMG00005000690) lingo1b (ENSCLMG00005000695) luzp2 (ENSCLMG00005000698) ENSCLMG00005000702 fibinb (ENSCLMG00005000705) bbox1 (ENSCLMG00005000707) MADD (ENSCLMG00005000719) Perciformes_a ANCESTRAL SPECIES 13 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Channel bull blenny MODERN SPECIES 17 dbx1a (ENSCGOG00000001219) htatip2 (ENSCGOG00000001220) prmt3 (ENSCGOG00000001228) slc6a5 (ENSCGOG00000001258) ENSCGOG00000001259 NELL1 (ENSCGOG00000001335) ENSCGOG00000001528 lrp4 (ENSCGOG00000001539) ENSCGOG00000001792 MAPK8IP1 (ENSCGOG00000001798) ENSCGOG00000001811 ENSCGOG00000001815 chst1 (ENSCGOG00000001830) slc35c1 (ENSCGOG00000001834) ENSCGOG00000001839 #21 slc1a2a (ENSCGOG00000001849) #22 apip (ENSCGOG00000001852) #25 LRRC4C (ENSCGOG00000001884) #7 ENSCGOG00000001886 hsd17b12b (ENSCGOG00000001890) ENSCGOG00000001946 ttc17 (ENSCGOG00000001962) traf6 (ENSCGOG00000002157) #14 trpm5 (ENSCGOG00000002202) ENSCGOG00000002213 kcnq1.1 (ENSCGOG00000002214) lingo1b (ENSCGOG00000002219) luzp2 (ENSCGOG00000002222) ENSCGOG00000002224 MADD (ENSCGOG00000002232) nr1h3 (ENSCGOG00000002270) Pike perch MODERN SPECIES 82 slc35c1 (ENSSLUG00000017970) ENSSLUG00000017964 #21 slc1a2a (ENSSLUG00000017959) #22 apip (ENSSLUG00000017908) #25 LRRC4C (ENSSLUG00000017894) #7 ENSSLUG00000017891 hsd17b12b (ENSSLUG00000017879) ttc17 (ENSSLUG00000017821) traf6 (ENSSLUG00000017786) #14 trpm5 (ENSSLUG00000017740) ENSSLUG00000017725 kcnq1.1 (ENSSLUG00000017670) lingo1b (ENSSLUG00000017658) luzp2 (ENSSLUG00000017652) ENSSLUG00000017651 fibinb (ENSSLUG00000017649) bbox1 (ENSSLUG00000017646) MADD (ENSSLUG00000017483) Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Gilthead seabream MODERN SPECIES 18 htatip2 (ENSSAUG00010011716) prmt3 (ENSSAUG00010011691) slc6a5 (ENSSAUG00010010819) ENSSAUG00010010810 ENSSAUG00010010809 NELL1 (ENSSAUG00010008045) lrp4 (ENSSAUG00010004401) ENSSAUG00010004148 MAPK8IP1 (ENSSAUG00010023930) ENSSAUG00010023929 ENSSAUG00010023928 ENSSAUG00010023927 chst1 (ENSSAUG00010023926) slc35c1 (ENSSAUG00010023924) PAMR1 (ENSSAUG00010023923) #21 slc1a2a (ENSSAUG00010023921) #22 apip (ENSSAUG00010023905) #25 LRRC4C (ENSSAUG00010023903) #7 ENSSAUG00010023901 hsd17b12b (ENSSAUG00010023900) ttc17 (ENSSAUG00010023858) traf6 (ENSSAUG00010023857) #14 trpm5 (ENSSAUG00010023856) ENSSAUG00010023855 kcnq1.1 (ENSSAUG00010023854) lingo1b (ENSSAUG00010023852) luzp2 (ENSSAUG00010023851) ENSSAUG00010023850 fibinb (ENSSAUG00010023849) bbox1 (ENSSAUG00010023848) MADD (ENSSAUG00010009467) Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00960000187709 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Large yellow croaker MODERN SPECIES 480 ENSLCRG00005016836 ENSLCRG00005016834 TNNT3 (ENSLCRG00005016828) prmt3 (ENSLCRG00005016606) slc6a5 (ENSLCRG00005016535) ENSLCRG00005016530 NELL1 (ENSLCRG00005016259) lrp4 (ENSLCRG00005014902) A3GALT2 (ENSLCRG00005014876) MAPK8IP1 (ENSLCRG00005014875) ENSLCRG00005014874 ENSLCRG00005014873 chst1 (ENSLCRG00005014872) slc35c1 (ENSLCRG00005014871) ENSLCRG00005014870 #21 slc1a2a (ENSLCRG00005014732) #22 APIP (ENSLCRG00005014706) #25 LRRC4C (ENSLCRG00005014705) #7 ENSLCRG00005014704 hsd17b12b (ENSLCRG00005014694) ttc17 (ENSLCRG00005014684) traf6 (ENSLCRG00005014629) #14 trpm5 (ENSLCRG00005014627) ENSLCRG00005014626 kcnq1.1 (ENSLCRG00005014622) lingo1b (ENSLCRG00005014620) luzp2 (ENSLCRG00005014618) ENSLCRG00005014616 fibinb (ENSLCRG00005014615) bbox1 (ENSLCRG00005014614) MADD (ENSLCRG00005014586) European seabass MODERN SPECIES 18 htatip2 (ENSDLAG00005012965) prmt3 (ENSDLAG00005012846) slc6a5 (ENSDLAG00005012316) ENSDLAG00005012301 NELL1 (ENSDLAG00005009953) ENSDLAG00005012296 ENSDLAG00005030258 ENSDLAG00005031681 ENSDLAG00005026530 ENSDLAG00005023230 ENSDLAG00005023185 ENSDLAG00005031403 ENSDLAG00005027746 ENSDLAG00005033046 ENSDLAG00005023170 #21 slc1a2a (ENSDLAG00005023133) #22 apip (ENSDLAG00005023121) #25 ENSDLAG00005028663 #7 ENSDLAG00005031274 ENSDLAG00005023114 hsd17b12b (ENSDLAG00005023065) ttc17 (ENSDLAG00005023010) ENSDLAG00005023002 #14 trpm5 (ENSDLAG00005022970) ENSDLAG00005022962 kcnq1.1 (ENSDLAG00005022920) ENSDLAG00005022918 ENSDLAG00005022913 ENSDLAG00005022909 fibinb (ENSDLAG00005034508) bbox1 (ENSDLAG00005022902) Ovalentaria ANCESTRAL SPECIES 17 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00530000063074.b.a ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00530000063074.b.a ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Aplocheiloidei ANCESTRAL SPECIES 39 ENSGT00530000063074.b.a ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Mangrove rivulus MODERN SPECIES 28 ENSKMAG00000004094 ASCC3 (ENSKMAG00000003953) sim1a (ENSKMAG00000003860) ENSKMAG00000003833 cyb5r4 (ENSKMAG00000003821) lrp4 (ENSKMAG00000003642) ENSKMAG00000003582 MAPK8IP1 (ENSKMAG00000003560) ENSKMAG00000003542 chst1 (ENSKMAG00000003525) slc35c1 (ENSKMAG00000003507) slc1a2a (ENSKMAG00000003466) #22 apip (ENSKMAG00000003435) #25 LRRC4C (ENSKMAG00000003421) #7 ENSKMAG00000003407 hsd17b12b (ENSKMAG00000003337) ttc17 (ENSKMAG00000003201) traf6 (ENSKMAG00000003166) #14 trpm5 (ENSKMAG00000003109) ENSKMAG00000003094 kcnq1.1 (ENSKMAG00000003034) ENSKMAG00000003018 ENSKMAG00000002993 ENSKMAG00000002982 lingo1b (ENSKMAG00000002973) ENSKMAG00000002957 luzp2 (ENSKMAG00000002863) Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015008690 ENSNFUG00015008695 ENSNFUG00015008697 MAPK8IP1 (ENSNFUG00015008703) RPL26 (ENSNFUG00015008711) ATPV0E1 (ENSNFUG00015008714) BNIP1A (ENSNFUG00015008720) nkx2.5 (ENSNFUG00015008727) Nfu_g_1_003199 (ENSNFUG00015008728) ENSNFUG00015008733 ENSNFUG00015008734 ENSNFUG00015008739 CHST1 (ENSNFUG00015008741) ENSNFUG00015008742 SLC35C1 (ENSNFUG00015008744) slc1a2a (ENSNFUG00015008803) #22 apip (ENSNFUG00015009611) #25 ENSNFUG00015009716 kcnq1.1 (ENSNFUG00015009769) LINGO1B (ENSNFUG00015010025) ENSNFUG00015010038 LUZP2 (ENSNFUG00015010066) ENSNFUG00015010105 ENSNFUG00015010116 ENSNFUG00015010126 ENSNFUG00015010135 CD151L (ENSNFUG00015010147) TMEM138 (ENSNFUG00015010161) ENSNFUG00015010197 RBPMS2 (ENSNFUG00015010258) PSMA4 (ENSNFUG00015010422) Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Poeciliinae ANCESTRAL SPECIES 13 ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b Poecilia ANCESTRAL SPECIES 4 ENSGT00940000158651 ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.b.b.a.a.b.b.b.a.a ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b NAME_6 ANCESTRAL SPECIES 307 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00530000068132 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d.c Amazon molly MODERN SPECIES 606 ENSPFOG00000024165 ENSPFOG00000019360 chst1 (ENSPFOG00000020573) slc35c1 (ENSPFOG00000019356) slc1a2a (ENSPFOG00000019354) #22 ENSPFOG00000022069 apip (ENSPFOG00000019349) #25 LRRC4C (ENSPFOG00000020572) #7 hsd17b12b (ENSPFOG00000019340) ttc17 (ENSPFOG00000019326) traf6 (ENSPFOG00000019321) #14 trpm5 (ENSPFOG00000019301) ENSPFOG00000019287 kcnq1.1 (ENSPFOG00000019285) Sailfin molly MODERN SPECIES 460 slc35c1 (ENSPLAG00000017746) slc1a2a (ENSPLAG00000017941) #22 apip (ENSPLAG00000017955) #25 LRRC4C (ENSPLAG00000017976) #7 ENSPLAG00000017984 hsd17b12b (ENSPLAG00000018035) Guppy MODERN SPECIES 455 TMEM266 (ENSPREG00000002657) ENSPREG00000002667 tpma (ENSPREG00000002685) tln2a (ENSPREG00000002748) ddx28 (ENSPREG00000002899) NFATC3 (ENSPREG00000002926) esrp2 (ENSPREG00000002991) ENSPREG00000003091 si:dkey-148a17.5 (ENSPREG00000003095) AMFR (ENSPREG00000003111) styx (ENSPREG00000003194) gnpnat1 (ENSPREG00000003239) MDGA1 (ENSPREG00000003270) chst1 (ENSPREG00000003312) slc35c1 (ENSPREG00000003324) slc1a2a (ENSPREG00000003339) #22 apip (ENSPREG00000003396) #25 LRRC4C (ENSPREG00000003410) #7 ENSPREG00000003415 hsd17b12b (ENSPREG00000003427) ttc17 (ENSPREG00000003490) traf6 (ENSPREG00000003542) #14 trpm5 (ENSPREG00000003582) ENSPREG00000003653 kcnq1.1 (ENSPREG00000003681) lingo1b (ENSPREG00000003732) luzp2 (ENSPREG00000003748) MADD (ENSPREG00000003870) ENSPREG00000004220 fibinb (ENSPREG00000004231) bbox1 (ENSPREG00000004239) Platyfish MODERN SPECIES 18 csrp3 (ENSXMAG00000027973) e2f8 (ENSXMAG00000010237) ENSXMAG00000024557 NAV2 (ENSXMAG00000010189) dbx1a (ENSXMAG00000010186) htatip2 (ENSXMAG00000010179) prmt3 (ENSXMAG00000010154) slc6a5 (ENSXMAG00000010152) NELL1 (ENSXMAG00000001374) ENSXMAG00000023927 lrp4 (ENSXMAG00000001380) MAPK8IP1 (ENSXMAG00000027053) ENSXMAG00000001456 chst1 (ENSXMAG00000020315) slc35c1 (ENSXMAG00000001466) slc1a2a (ENSXMAG00000001471) #22 apip (ENSXMAG00000001487) #25 LRRC4C (ENSXMAG00000019680) #7 ENSXMAG00000023283 hsd17b12b (ENSXMAG00000011880) ttc17 (ENSXMAG00000011837) traf6 (ENSXMAG00000011827) #14 trpm5 (ENSXMAG00000011779) ENSXMAG00000022786 kcnq1.1 (ENSXMAG00000011736) lingo1b (ENSXMAG00000011734) luzp2 (ENSXMAG00000025139) ENSXMAG00000021427 fibinb (ENSXMAG00000020083) bbox1 (ENSXMAG00000000010) MADD (ENSXMAG00000000012) NAME_4 ANCESTRAL SPECIES 66 ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A.ac.b ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Mummichog MODERN SPECIES 244 slc35c1 (ENSFHEG00000011310) slc1a2a (ENSFHEG00000011363) #22 apip (ENSFHEG00000000812) #25 LRRC4C (ENSFHEG00000011409) #7 ENSFHEG00000011431 hsd17b12b (ENSFHEG00000011438) ttc17 (ENSFHEG00000011455) traf6 (ENSFHEG00000011482) #14 trpm5 (ENSFHEG00000011546) ENSFHEG00000011558 kcnq1.1 (ENSFHEG00000011674) lingo1b (ENSFHEG00000011694) luzp2 (ENSFHEG00000011735) Sheepshead minnow MODERN SPECIES 571 ENSCVAG00000004203 MAPK8IP1 (ENSCVAG00000004240) ENSCVAG00000004252 chst1 (ENSCVAG00000004261) slc35c1 (ENSCVAG00000004269) slc1a2a (ENSCVAG00000004291) #22 apip (ENSCVAG00000004317) #25 LRRC4C (ENSCVAG00000004328) #7 ENSCVAG00000004335 hsd17b12b (ENSCVAG00000004355) Oryzias DUPLICATION Oryzias ANCESTRAL SPECIES ENSGT00940000155379.g.a.c #22 Oryzias_a ANCESTRAL SPECIES 6 ENSGT00940000153246.a.a.a.d ENSGT00390000007681.b.a.a ENSGT00530000063074.b.a ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00950000182858.C.f.i.b ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a.c #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Chinese medaka MODERN SPECIES 621 slc1a2a (ENSOSIG00000016878) #22 Japanese Medaka HdrR MODERN SPECIES 17 ENSORLG00000030475 slc6a5 (ENSORLG00000000875) NELL1 (ENSORLG00000022140) ENSORLG00000025652 ENSORLG00000022596 ENSORLG00000023544 ENSORLG00000026038 MAPK8IP1 (ENSORLG00000000916) ENSORLG00000028272 ENSORLG00000023015 ENSORLG00000029669 ENSORLG00000000893 ENSORLG00000000925 chst1 (ENSORLG00000000946) slc35c1 (ENSORLG00000024413) slc1a2a (ENSORLG00000000964) #22 ENSORLG00000030529 apip (ENSORLG00000000982) #25 ENSORLG00000030542 LRRC4C (ENSORLG00000000988) #7 ENSORLG00000029427 ENSORLG00000026513 hsd17b12b (ENSORLG00000001004) ttc17 (ENSORLG00000001038) traf6 (ENSORLG00000001046) #14 trpm5 (ENSORLG00000001106) ENSORLG00000001115 kcnq1.1 (ENSORLG00000001120) ENSORLG00000001128 luzp2 (ENSORLG00000025458) ENSORLG00000023806 Oryzias ANCESTRAL SPECIES 13 ENSGT00530000063074.b.a ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a.d #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Oryzias_a ANCESTRAL SPECIES ENSGT00940000155379.g.a.d #22 Chinese medaka MODERN SPECIES 4788 ENSOSIG00000011839 #22 Oryzias_b ANCESTRAL SPECIES 5 ENSGT00940000159533 ENSGT00940000158651 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000158287 ENSGT00950000182858.C.f.h ENSGT00950000182858.C.f.g ENSGT00940000157089.B ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000155379.g.a.d #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 ENSGT00940000159068 Javanese ricefish MODERN SPECIES 17 prmt3 (ENSOJAG00000011109) slc6a5 (ENSOJAG00000011557) NELL1 (ENSOJAG00000012002) ENSOJAG00000014828 lrp4 (ENSOJAG00000014843) ENSOJAG00000015490 ENSOJAG00000015497 ENSOJAG00000015513 ENSOJAG00000015638 MAPK8IP1 (ENSOJAG00000015651) ENSOJAG00000015665 chst1 (ENSOJAG00000015677) ENSOJAG00000015688 ENSOJAG00000015714 slc35c1 (ENSOJAG00000015726) ENSOJAG00000015820 #22 apip (ENSOJAG00000016902) #25 ENSOJAG00000000068 LRRC4C (ENSOJAG00000000089) #7 ENSOJAG00000000128 hsd17b12b (ENSOJAG00000000159) ENSOJAG00000000172 ttc17 (ENSOJAG00000000240) traf6 (ENSOJAG00000000283) #14 trpm5 (ENSOJAG00000000332) ENSOJAG00000000367 kcnq1.1 (ENSOJAG00000000373) lingo1b (ENSOJAG00000000390) luzp2 (ENSOJAG00000000423) ENSOJAG00000000435 ENSOJAG00000000439 Indian medaka MODERN SPECIES 26 slc6a5 (ENSOMEG00000003689) NELL1 (ENSOMEG00000003767) lrp4 (ENSOMEG00000003967) ENSOMEG00000004083 ENSOMEG00000004105 MAPK8IP1 (ENSOMEG00000004148) ENSOMEG00000004172 gjb9a (ENSOMEG00000004186) marcksl1a (ENSOMEG00000004195) bsdc1 (ENSOMEG00000004206) olig4 (ENSOMEG00000004214) FNDC5 (ENSOMEG00000004225) CACNG4 (ENSOMEG00000004240) chst1 (ENSOMEG00000004247) slc35c1 (ENSOMEG00000004263) slc1a2a (ENSOMEG00000004288) #22 apip (ENSOMEG00000004323) #25 LRRC4C (ENSOMEG00000004334) #7 ENSOMEG00000000101 hsd17b12b (ENSOMEG00000004391) ttc17 (ENSOMEG00000004476) traf6 (ENSOMEG00000004508) #14 ENSOMEG00000004518 trpm5 (ENSOMEG00000004578) hpca (ENSOMEG00000004619) ENSOMEG00000004635 zgc:91944 (ENSOMEG00000004690) khdrbs1b (ENSOMEG00000004739) ENSOMEG00000004764 kcnq1.1 (ENSOMEG00000004792) lingo1b (ENSOMEG00000004809) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.a ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Pomacentridae ANCESTRAL SPECIES 15 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b.e ENSGT00940000156718 Pomacentridae_A ANCESTRAL SPECIES 66 ENSGT00940000181004 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.a ENSGT00940000157530.b.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b.e ENSGT00940000156718 Amphiprion ANCESTRAL SPECIES 42 ENSGT00940000181004 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000180696 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000177592.b.a.a ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000157530.b.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b.e ENSGT00940000156718 ENSGT00940000159068 Clown anemonefish MODERN SPECIES 3405 slc35c1 (ENSAOCG00000003739) ENSAOCG00000003755 #21 slc1a2a (ENSAOCG00000003760) #22 apip (ENSAOCG00000003766) #25 LRRC4C (ENSAOCG00000003770) #7 Orange clownfish MODERN SPECIES ENSAPEG00000000136 ENSAPEG00000000135 ENSAPEG00000000134 ENSAPEG00000000133 NELL1 (ENSAPEG00000000132) ENSAPEG00000000131 lrp4 (ENSAPEG00000000128) A3GALT2 (ENSAPEG00000000127) MAPK8IP1 (ENSAPEG00000000126) ENSAPEG00000000125 ENSAPEG00000000124 ENSAPEG00000000123 chst1 (ENSAPEG00000000122) slc35c1 (ENSAPEG00000000121) ENSAPEG00000000120 #21 slc1a2a (ENSAPEG00000000119) #22 apip (ENSAPEG00000000118) #25 LRRC4C (ENSAPEG00000000117) #7 ENSAPEG00000000116 hsd17b12b (ENSAPEG00000000115) ttc17 (ENSAPEG00000000113) traf6 (ENSAPEG00000000112) #14 ENSAPEG00000000111 trpm5 (ENSAPEG00000000110) ENSAPEG00000000109 kcnq1.1 (ENSAPEG00000000108) ENSAPEG00000000107 lingo1b (ENSAPEG00000000106) ENSAPEG00000000105 luzp2 (ENSAPEG00000000104) ENSAPEG00000000103 Spiny chromis MODERN SPECIES 560 ENSAPOG00000000803 slc35c1 (ENSAPOG00000019056) ENSAPOG00000019034 #21 slc1a2a (ENSAPOG00000018988) #22 apip (ENSAPOG00000018941) #25 LRRC4C (ENSAPOG00000018935) #7 Bicolor damselfish MODERN SPECIES 1130 chst1 (ENSSPAG00000000097) slc35c1 (ENSSPAG00000000088) ENSSPAG00000000076 #21 slc1a2a (ENSSPAG00000000058) #22 apip (ENSSPAG00000000046) #25 Cichlidae ANCESTRAL SPECIES 11 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Pseudocrenilabrinae_A ANCESTRAL SPECIES 13 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.m.a ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Haplochromini ANCESTRAL SPECIES 11 ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00390000007623.c ENSGT00530000063582.b ENSGT00940000156718 Burton s mouthbrooder MODERN SPECIES 391 ENSHBUG00000007176 slc1a2a (ENSHBUG00000007185) #22 apip (ENSHBUG00000007203) #25 ENSHBUG00000007216 LRRC4C (ENSHBUG00000007219) #7 ENSHBUG00000007226 hsd17b12b (ENSHBUG00000007896) ttc17 (ENSHBUG00000008044) traf6 (ENSHBUG00000008059) #14 trpm5 (ENSHBUG00000008166) ENSHBUG00000008179 kcnq1.1 (ENSHBUG00000008214) lingo1b (ENSHBUG00000008222) luzp2 (ENSHBUG00000008237) ENSHBUG00000008247 fibinb (ENSHBUG00000008262) bbox1 (ENSHBUG00000008274) Haplochromini_A ANCESTRAL SPECIES 10 ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00810000125439.A ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f.m.b ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00940000179349 ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00940000180992 ENSGT00390000007623.c ENSGT00530000063582.b P. nyererei MODERN SPECIES 546 slc35c1 (ENSPNYG00000001761) PAMR1 (ENSPNYG00000001783) #21 slc1a2a (ENSPNYG00000001824) #22 apip (ENSPNYG00000001867) #25 LRRC4C (ENSPNYG00000001889) #7 ENSPNYG00000001904 hsd17b12b (ENSPNYG00000001922) ttc17 (ENSPNYG00000002006) traf6 (ENSPNYG00000002103) #14 trpm5 (ENSPNYG00000002122) ENSPNYG00000002195 ENSPNYG00000002213 kcnq1.1 (ENSPNYG00000002237) lingo1b (ENSPNYG00000002331) luzp2 (ENSPNYG00000002347) Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00940000155663.f.b ENSGT00950000183093.B.a.b ENSGT00390000008184 ENSGT00940000156825 ENSGT00940000154963 ENSGT00940000163467.a.b.b.a.b ENSGT00940000158287 ENSGT00950000182858.C.f.n ENSGT00940000157089.B ENSGT00940000163916 ENSGT00940000157530.b.b ENSGT00940000161262.a ENSGT00940000179349 ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000176990 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000167611 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT00390000013180 ENSGT00860000135092 ENSGT00940000180992 ENSGT00390000007623.c ENSGT00530000063582.b Zebra mbuna MODERN SPECIES 1091 slc6a5 (ENSMZEG00005014432) ENSMZEG00005014419 NELL1 (ENSMZEG00005014408) lrp4 (ENSMZEG00005014311) ENSMZEG00005014270 ENSMZEG00005014257 ENSMZEG00005014251 MAPK8IP1 (ENSMZEG00005014229) ENSMZEG00005014220 ENSMZEG00005014211 ENSMZEG00005014203 chst1 (ENSMZEG00005014195) ENSMZEG00005014191 slc35c1 (ENSMZEG00005014185) PAMR1 (ENSMZEG00005014173) #21 slc1a2a (ENSMZEG00005014155) #22 apip (ENSMZEG00005014143) #25 LRRC4C (ENSMZEG00005014136) #7 ENSMZEG00005014126 hsd17b12b (ENSMZEG00005014110) ttc17 (ENSMZEG00005014070) traf6 (ENSMZEG00005014045) #14 trpm5 (ENSMZEG00005014025) ENSMZEG00005014019 kcnq1.1 (ENSMZEG00005013995) lingo1b (ENSMZEG00005013989) luzp2 (ENSMZEG00005013982) ENSMZEG00005013963 ENSMZEG00005013960 fibinb (ENSMZEG00005013957) bbox1 (ENSMZEG00005013942) Eastern happy MODERN SPECIES zgc:92818 (ENSACLG00000010563) vps35 (ENSACLG00000010584) ENSACLG00000010647 vstm2b (ENSACLG00000010655) ENSACLG00000010664 MAPK8IP1 (ENSACLG00000010772) ENSACLG00000010824 ENSACLG00000010836 ENSACLG00000010839 ENSACLG00000010847 chst1 (ENSACLG00000010864) ENSACLG00000010871 ENSACLG00000010898 slc35c1 (ENSACLG00000010925) PAMR1 (ENSACLG00000010941) #21 slc1a2a (ENSACLG00000010975) #22 apip (ENSACLG00000011019) #25 LRRC4C (ENSACLG00000011030) #7 ENSACLG00000011151 hsd17b12b (ENSACLG00000011156) ENSACLG00000011193 ttc17 (ENSACLG00000011214) traf6 (ENSACLG00000011257) #14 trpm5 (ENSACLG00000011284) ENSACLG00000011306 kcnq1.1 (ENSACLG00000011722) lingo1b (ENSACLG00000011740) luzp2 (ENSACLG00000011852) ENSACLG00000011896 ENSACLG00000011916 fibinb (ENSACLG00000011931) Lyretail cichlid MODERN SPECIES 320 dbx1a (ENSNBRG00000017981) htatip2 (ENSNBRG00000017997) prmt3 (ENSNBRG00000018024) slc6a5 (ENSNBRG00000018128) NELL1 (ENSNBRG00000018215) ENSNBRG00000018265 lrp4 (ENSNBRG00000018321) ENSNBRG00000018403 MAPK8IP1 (ENSNBRG00000018420) ENSNBRG00000018456 ENSNBRG00000018473 chst1 (ENSNBRG00000018513) ENSNBRG00000018522 slc35c1 (ENSNBRG00000018530) PAMR1 (ENSNBRG00000018544) #21 slc1a2a (ENSNBRG00000018584) #22 apip (ENSNBRG00000018631) #25 LRRC4C (ENSNBRG00000018764) #7 ENSNBRG00000018783 hsd17b12b (ENSNBRG00000018801) ttc17 (ENSNBRG00000018886) traf6 (ENSNBRG00000018939) #14 trpm5 (ENSNBRG00000018973) ENSNBRG00000019035 kcnq1.1 (ENSNBRG00000019059) lingo1b (ENSNBRG00000019132) luzp2 (ENSNBRG00000019155) ENSNBRG00000019184 ENSNBRG00000019196 fibinb (ENSNBRG00000019208) bbox1 (ENSNBRG00000019224) Nile tilapia MODERN SPECIES ENSONIG00000041528 ENSONIG00000030513 ENSONIG00000032798 TNNT3 (ENSONIG00000007898) myod2 (ENSONIG00000007897) OTOG (ENSONIG00000007889) celf1 (ENSONIG00000008300) ENSONIG00000041355 A3GALT2 (ENSONIG00000027795) ENSONIG00000042626 MAPK8IP1 (ENSONIG00000036840) ENSONIG00000034018 ENSONIG00000005920 chst1 (ENSONIG00000020452) ENSONIG00000005915 #21 slc1a2a (ENSONIG00000005912) #22 hsd17b12b (ENSONIG00000042636) apip (ENSONIG00000005908) #25 LRRC4C (ENSONIG00000020451) #7 ENSONIG00000036270 ttc17 (ENSONIG00000005886) traf6 (ENSONIG00000040460) #14 trpm5 (ENSONIG00000005867) ENSONIG00000034462 kcnq1.1 (ENSONIG00000005859) lingo1b (ENSONIG00000005857) luzp2 (ENSONIG00000034475) ENSONIG00000036464 ENSONIG00000023333 fibinb (ENSONIG00000020450) bbox1 (ENSONIG00000005854) Midas cichlid MODERN SPECIES 1094 ENSACIG00000021540 ENSACIG00000021523 MAPK8IP1 (ENSACIG00000021491) ENSACIG00000021451 ENSACIG00000021353 chst1 (ENSACIG00000021348) slc35c1 (ENSACIG00000021337) PAMR1 (ENSACIG00000021308) #21 slc1a2a (ENSACIG00000021292) #22 apip (ENSACIG00000021283) #25 LRRC4C (ENSACIG00000021271) #7 ENSACIG00000021259 ENSACIG00000021246 hsd17b12b (ENSACIG00000021230) ttc17 (ENSACIG00000021176) traf6 (ENSACIG00000021157) #14 trpm5 (ENSACIG00000021027) ENSACIG00000021007 kcnq1.1 (ENSACIG00000020978) lingo1b (ENSACIG00000020970) luzp2 (ENSACIG00000020949) ENSACIG00000020940 fibinb (ENSACIG00000020934) bbox1 (ENSACIG00000020912) Pinecone sodierfish MODERN SPECIES 17 SHANK2 (ENSMMDG00005016237) ENSMMDG00005016241 ENSMMDG00005016247 ENSMMDG00005016252 guca1g (ENSMMDG00005016263) ENSMMDG00005016336 ENSMMDG00005016339 ENSMMDG00005016365 ENSMMDG00005016422 ENSMMDG00005016425 chst1 (ENSMMDG00005016426) ENSMMDG00005016428 slc35c1 (ENSMMDG00005016429) CRY2 (ENSMMDG00005016431) PAMR1 (ENSMMDG00005016434) #21 slc1a2a (ENSMMDG00005016437) #22 apip (ENSMMDG00005016444) #25 LRRC4C (ENSMMDG00005016458) #7 ENSMMDG00005016461 hsd17b12b (ENSMMDG00005016464) ttc17 (ENSMMDG00005016477) traf6 (ENSMMDG00005016512) #14 trpm5 (ENSMMDG00005016524) ENSMMDG00005016535 KCNQ1 (ENSMMDG00005016539) lingo1b (ENSMMDG00005016544) luzp2 (ENSMMDG00005016545) ENSMMDG00005016546 fibinb (ENSMMDG00005016548) bbox1 (ENSMMDG00005016551) MADD (ENSMMDG00005016724) Cod MODERN SPECIES 5 ENSGMOG00000014244 ENSGMOG00000025563 ENSGMOG00000022752 ENSGMOG00000029068 ENSGMOG00000024080 ENSGMOG00000023643 ENSGMOG00000032352 ENSGMOG00000026591 ENSGMOG00000027766 ENSGMOG00000027114 ENSGMOG00000011130 ENSGMOG00000028603 ENSGMOG00000011131 slc1a2a (ENSGMOG00000011121) #22 hsd17b12b (ENSGMOG00000002048) apip (ENSGMOG00000011141) #25 ENSGMOG00000020132 #7 ttc17 (ENSGMOG00000014188) traf6 (ENSGMOG00000024723) #14 trpm5 (ENSGMOG00000014268) ENSGMOG00000014334 kcnq1.1 (ENSGMOG00000007001) ENSGMOG00000022363 lingo1b (ENSGMOG00000020262) ENSGMOG00000032019 ENSGMOG00000031872 ENSGMOG00000028714 ENSGMOG00000025604 ENSGMOG00000005320 Protacanthopterygii ANCESTRAL SPECIES 101 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000166194.a.a ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a ENSGT00940000160333 ENSGT00390000017790 Salmoninae ANCESTRAL SPECIES 1 ENSGT00940000157475 ENSGT00950000182965.a.b.b.b ENSGT00950000182965.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT01030000234539.a.a.b.a.b.a.a.k.a.a ENSGT00940000158440.g.a ENSGT00940000157505 ENSGT00940000153499.b.b.d.a.a ENSGT00940000153499.b.b.d.a.b.h.a ENSGT00940000158146.a ENSGT00940000161262.a.n ENSGT00390000013315 ENSGT00940000159073 ENSGT00940000157089.A.a ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00390000006196.k.b ENSGT00940000166194.a.b ENSGT00940000166194.a.a ENSGT00940000155426 #14 ENSGT00940000160588 ENSGT00940000162677.qc ENSGT00940000161001 ENSGT00940000164990.d ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 4373 ENSHHUG00000039694 #21 ENSHHUG00000039703 ENSHHUG00000039705 #21 slc1a2a (ENSHHUG00000039714) #22 ENSHHUG00000039716 #22 apip (ENSHHUG00000039724) #25 klhl38a (ENSHHUG00000039731) Huchen MODERN SPECIES 4373 ENSHHUG00000039694 #21 ENSHHUG00000039703 ENSHHUG00000039705 #21 slc1a2a (ENSHHUG00000039714) #22 ENSHHUG00000039716 #22 apip (ENSHHUG00000039724) #25 klhl38a (ENSHHUG00000039731) Huchen MODERN SPECIES 6744 ENSHHUG00000001062 #22 Salmoninae_a ANCESTRAL SPECIES 85 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00390000006196.k.b ENSGT00940000166194.a.b ENSGT00940000166194.a.a ENSGT00940000155426 #14 ENSGT00940000160588.b ENSGT00940000162677.qc.b ENSGT00940000160588.a ENSGT00940000162677.qc.a ENSGT00940000161001 ENSGT00940000164990.d Oncorhynchus ANCESTRAL SPECIES ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000006043 ENSGT00940000158844 ENSGT00940000155837.p.d ENSGT01030000234519.e.b.m.a.d ENSGT00940000157475 ENSGT00950000182965.a.b.b.b ENSGT00940000158440.g.a.g.b ENSGT00940000157505 ENSGT00940000153499.b.b.d.a.a ENSGT00940000158146.a.c.b ENSGT00940000161262.a.n ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.l ENSGT00940000166194.a.a ENSGT00940000155426 #14 ENSGT00940000160588.b ENSGT00940000162677.qc.b ENSGT00940000160588.a ENSGT00940000162677.qc.a ENSGT00940000161001 ENSGT00940000154996.a.b.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00390000006347.a.g.b Oncorhynchus_a ANCESTRAL SPECIES 304 ENSGT00940000161262.a.n ENSGT00390000013315 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 Coho salmon DUPLICATION Coho salmon MODERN SPECIES 32 ENSOKIG00005036102 cars1 (ENSOKIG00005034427) ENSOKIG00005034291 ENSOKIG00005034266 ttc17 (ENSOKIG00005034171) ENSOKIG00005034040 TRAF6 (ENSOKIG00005034012) #14 trpm5 (ENSOKIG00005033333) ENSOKIG00005033243 ENSOKIG00005033109 lingo1b (ENSOKIG00005033071) ENSOKIG00005031839 CHST1 (ENSOKIG00005031722) slc35c1 (ENSOKIG00005031717) PAMR1 (ENSOKIG00005031706) #21 slc1a2a (ENSOKIG00005031245) #22 apip (ENSOKIG00005031096) #25 LRRC4C (ENSOKIG00005031076) #7 ENSOKIG00005031071 smad6a (ENSOKIG00005031063) ENSOKIG00005031026 SMAD3 (ENSOKIG00005030867) MAP2K5 (ENSOKIG00005030818) skor1a (ENSOKIG00005030605) ENSOKIG00005030513 morf4l1 (ENSOKIG00005030482) UACA (ENSOKIG00005030214) ENSOKIG00005030169 ENSOKIG00005030159 ENSOKIG00005030149 TLE3 (ENSOKIG00005027326) Coho salmon MODERN SPECIES 1407 SLC35C1 (ENSOKIG00005049619) ENSOKIG00005049623 PAMR1 (ENSOKIG00005049625) #21 slc1a2a (ENSOKIG00005049647) #22 apip (ENSOKIG00005049757) #25 LRRC4C (ENSOKIG00005049783) #7 Chinook salmon MODERN SPECIES 834 PAMR1 (ENSOTSG00005017992) #21 slc1a2a (ENSOTSG00005017999) #22 ENSOTSG00005018136 ENSOTSG00005018149 ENSOTSG00005018151 ENSOTSG00005018152 ENSOTSG00005018153 ENSOTSG00005018154 ENSOTSG00005018155 ENSOTSG00005018156 Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 27 ENSOMYG00000054756 TLE3 (ENSOMYG00000051984) ENSOMYG00000002551 ENSOMYG00000070845 morf4l1 (ENSOMYG00000002673) ENSOMYG00000002685 PIAS1 (ENSOMYG00000070434) ENSOMYG00000077338 skor1a (ENSOMYG00000057349) map2k5 (ENSOMYG00000064462) ENSOMYG00000002807 smad6a (ENSOMYG00000074703) ENSOMYG00000068058 ENSOMYG00000002832 ENSOMYG00000069110 #21 slc1a2a (ENSOMYG00000002858) #22 apip (ENSOMYG00000071183) #25 ENSOMYG00000061757 ENSOMYG00000030570 ENSOMYG00000002918 #7 hsd17b12b (ENSOMYG00000054352) ttc17 (ENSOMYG00000066781) ENSOMYG00000065809 ENSOMYG00000040541 #14 trpm5 (ENSOMYG00000057858) ENSOMYG00000040589 ENSOMYG00000067852 ENSOMYG00000062919 ENSOMYG00000048968 ENSOMYG00000004278 ENSOMYG00000004018 Rainbow trout MODERN SPECIES 18 ENSOMYG00000069520 TLE3 (ENSOMYG00000048144) UACA (ENSOMYG00000057286) mo4l1 (ENSOMYG00000049978) ENSOMYG00000064318 PIAS1 (ENSOMYG00000049756) ENSOMYG00000076342 skor1a (ENSOMYG00000040079) map2k5 (ENSOMYG00000065445) smad3 (ENSOMYG00000064926) smad6a (ENSOMYG00000050910) ENSOMYG00000064779 ENSOMYG00000056192 ENSOMYG00000057959 ENSOMYG00000024704 #21 slc1a2a (ENSOMYG00000051777) #22 apip (ENSOMYG00000072316) #25 ENSOMYG00000055763 ENSOMYG00000040103 #7 hsd17b12b (ENSOMYG00000065304) ttc17 (ENSOMYG00000040239) ENSOMYG00000040503 ENSOMYG00000040584 ENSOMYG00000055804 ENSOMYG00000040562 ENSOMYG00000040579 ENSOMYG00000059707 ENSOMYG00000063833 ENSOMYG00000004371 ENSOMYG00000075306 ENSOMYG00000052355 Salmo ANCESTRAL SPECIES 138 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00990000209089.b ENSGT00940000154860.a.a.d ENSGT00390000006196.k.a ENSGT00940000166194.a.b.a ENSGT00940000166194.a.a ENSGT00940000155426 #14 ENSGT00940000160588.a ENSGT00940000162677.qc.b ENSGT00940000162677.qc.a.a ENSGT00940000161001 ENSGT00940000164990.d.f ENSGT00940000154996.a.b.b.c ENSGT01060000248595.b.a.b.a.n.b.e River trout DUPLICATION River trout MODERN SPECIES 21 PAQR5 (ENSSTUG00000018329) kif23 (ENSSTUG00000016129) ENSSTUG00000016054 TLE3 (ENSSTUG00000014027) skor1a (ENSSTUG00000013956) map2k5 (ENSSTUG00000013921) SMAD3 (ENSSTUG00000013882) smad6a (ENSSTUG00000013876) ENSSTUG00000013858 ENSSTUG00000013853 ENSSTUG00000013845 CHST1 (ENSSTUG00000013841) slc35c1 (ENSSTUG00000013839) CRY2 (ENSSTUG00000013635) PAMR1 (ENSSTUG00000013601) #21 slc1a2a (ENSSTUG00000013581) #22 apip (ENSSTUG00000013552) #25 LRRC4C (ENSSTUG00000013543) #7 ENSSTUG00000013540 ENSSTUG00000013536 hsd17b12b (ENSSTUG00000013517) ttc17 (ENSSTUG00000012270) ENSSTUG00000012217 traf6 (ENSSTUG00000012206) #14 trpm5 (ENSSTUG00000012144) ENSSTUG00000012134 ENSSTUG00000012121 ENSSTUG00000012108 kcnq1.1 (ENSSTUG00000011950) lingo1b (ENSSTUG00000011940) cpt1aa (ENSSTUG00000011258) River trout MODERN SPECIES 3 nudt19 (ENSSTUG00000011787) nudt19 (ENSSTUG00000011774) zgc:165481 (ENSSTUG00000011768) cep89 (ENSSTUG00000011701) ENSSTUG00000011680 rhpn2 (ENSSTUG00000010864) SMAD6 (ENSSTUG00000010836) ENSSTUG00000010826 ENSSTUG00000010818 ENSSTUG00000010812 CHST1 (ENSSTUG00000010805) ENSSTUG00000010798 slc35c1 (ENSSTUG00000010792) CRY2 (ENSSTUG00000010660) PAMR1 (ENSSTUG00000010619) #21 slc1a2a (ENSSTUG00000010538) #22 apip (ENSSTUG00000010508) #25 LRRC4C (ENSSTUG00000010505) #7 ENSSTUG00000010500 hsd17b12b (ENSSTUG00000010485) ttc17 (ENSSTUG00000009896) ENSSTUG00000009872 ENSSTUG00000009839 ENSSTUG00000009812 traf6 (ENSSTUG00000009787) #14 trpm5 (ENSSTUG00000009687) ENSSTUG00000009677 ENSSTUG00000009667 kcnq1.1 (ENSSTUG00000009396) lingo1b (ENSSTUG00000009375) cpt1aa (ENSSTUG00000008905) Atlantic salmon MODERN SPECIES 18 ENSSSAG00000096373 mo4l1 (ENSSSAG00000081184) ENSSSAG00000040397 PIAS1 (ENSSSAG00000085914) skor1a (ENSSSAG00000065500) map2k5 (ENSSSAG00000089565) ENSSSAG00000121852 smad6a (ENSSSAG00000088892) chst1 (ENSSSAG00000004800) ENSSSAG00000085173 ENSSSAG00000120164 ENSSSAG00000114794 ENSSSAG00000112050 CRY2 (ENSSSAG00000069768) ENSSSAG00000062807 #21 slc1a2a (ENSSSAG00000009050) #22 apip (ENSSSAG00000042232) #25 ENSSSAG00000091855 #7 ENSSSAG00000040431 hsd17b12b (ENSSSAG00000040461) ttc17 (ENSSSAG00000040540) ENSSSAG00000076731 ENSSSAG00000009850 #14 ENSSSAG00000101306 ENSSSAG00000069803 CDN1C (ENSSSAG00000069801) ENSSSAG00000069738 ENSSSAG00000069709 ENSSSAG00000062476 ENSSSAG00000065651 ENSSSAG00000009760 Northern pike MODERN SPECIES 1 kif23 (ENSELUG00000021675) ENSELUG00000021509 tle3a (ENSELUG00000021491) UACA (ENSELUG00000021409) ENSELUG00000021372 ENSELUG00000022543 PIAS1 (ENSELUG00000021305) skor1a (ENSELUG00000021269) map2k5 (ENSELUG00000021260) SMAD3 (ENSELUG00000021087) smad6a (ENSELUG00000021062) CHST1 (ENSELUG00000021051) slc35c1 (ENSELUG00000021039) CRY2 (ENSELUG00000021019) PAMR1 (ENSELUG00000020976) #21 slc1a2a (ENSELUG00000000921) #22 apip (ENSELUG00000020924) #25 LRRC4C (ENSELUG00000031309) #7 ENSELUG00000020858 ENSELUG00000020845 ttc17 (ENSELUG00000020818) ENSELUG00000030198 ENSELUG00000020662 traf6 (ENSELUG00000020636) #14 trpm5 (ENSELUG00000020566) ENSELUG00000020526 kcnq1.1 (ENSELUG00000020500) lingo1b (ENSELUG00000020454) cpt1aa (ENSELUG00000020423) cars1 (ENSELUG00000020347) slc22a18 (ENSELUG00000020269) Otomorpha ANCESTRAL SPECIES 366 ENSGT00950000182839.B.b.a ENSGT00940000165300.b.a.a.a ENSGT00940000164512.d ENSGT00940000162544.d ENSGT00940000165300.a ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT01000000214788 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00530000063981.b.d #15 ENSGT00940000160588 ENSGT00940000164990.d ENSGT00940000154996.a.b.b Clupeiformes ANCESTRAL SPECIES 44 ENSGT00700000104539.b.b ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00940000155426 #14 ENSGT00530000063981.b.d #15 ENSGT00940000160588 ENSGT00940000162677 ENSGT00940000161001 ENSGT00950000182857.a.a.b.b.b ENSGT00940000154996.a.b.b ENSGT00940000155399.a ENSGT00940000159422.b ENSGT00940000155491.d ENSGT00390000003488.a.a Denticle herring MODERN SPECIES 7 dbx1a (ENSDCDG00000035870) htatip2 (ENSDCDG00000035869) ENSDCDG00000035868 ENSDCDG00000035867 ENSDCDG00000035866 ENSDCDG00000035865 ENSDCDG00000035864 ENSDCDG00000035863 ENSDCDG00000035862 ENSDCDG00000035861 ENSDCDG00000035860 ENSDCDG00000035859 ENSDCDG00000035858 ENSDCDG00000035857 ENSDCDG00000035856 #21 slc1a2a (ENSDCDG00000035855) #22 apip (ENSDCDG00000035854) #25 LRRC4C (ENSDCDG00000035853) #7 ENSDCDG00000035852 hsd17b12b (ENSDCDG00000035851) ttc17 (ENSDCDG00000035850) traf6 (ENSDCDG00000035849) #14 trpm5 (ENSDCDG00000035848) ENSDCDG00000035847 ENSDCDG00000035846 ifitm5 (ENSDCDG00000035842) LINGO1 (ENSDCDG00000035841) slc25a44b (ENSDCDG00000035837) crabp1b (ENSDCDG00000035835) ENSDCDG00000035833 tnfaip8l3 (ENSDCDG00000035831) Atlantic herring MODERN SPECIES 22 taldo1 (ENSCHAG00000005669) cd151l (ENSCHAG00000005614) AP2A2 (ENSCHAG00000004401) ENSCHAG00000004022 ENSCHAG00000003935 ENSCHAG00000003878 ENSCHAG00000003831 ENSCHAG00000003804 ENSCHAG00000003696 ENSCHAG00000003685 ENSCHAG00000003661 ascl1b (ENSCHAG00000003653) ldlrad3 (ENSCHAG00000003625) FJX1 (ENSCHAG00000003615) #20 PAMR1 (ENSCHAG00000003579) #21 slc1a2a (ENSCHAG00000001007) #22 ENSCHAG00000000293 apip (ENSCHAG00000000270) #25 LRRC4C (ENSCHAG00000000256) #7 hsd17b12b (ENSCHAG00000027532) ttc17 (ENSCHAG00000027522) traf6 (ENSCHAG00000027515) #14 ENSCHAG00000027514 #15 trpm5 (ENSCHAG00000027512) cdkn1ca (ENSCHAG00000027510) KCNQ1 (ENSCHAG00000027489) ifitm5 (ENSCHAG00000027481) lingo1b (ENSCHAG00000027479) psma4 (ENSCHAG00000027474) slc25a44b (ENSCHAG00000027472) ENSCHAG00000027465 Otophysi ANCESTRAL SPECIES 114 ENSGT00950000182839.B.b.a ENSGT00940000165300.b.a.a.a ENSGT00940000165300.a ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT01000000214788.d ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000179199 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 ENSGT00690000102225 ENSGT00390000008502 ENSGT01030000234623.a.b.b ENSGT00940000169559 ENSGT00940000160456 ENSGT00390000010652.C Characiphysae ANCESTRAL SPECIES 6 ENSGT00940000153525.i.b ENSGT00390000008708.h.a ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000160916 ENSGT00940000155016 ENSGT00940000158927 ENSGT00940000164520 ENSGT00390000011067.B ENSGT00700000104539.b.b ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT01000000214788.d ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000179199 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 ENSGT00690000102225 ENSGT00390000008502 ENSGT01030000234623.a.b.b ENSGT00940000160456 ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a Channel catfish MODERN SPECIES 19 Edil3 (ENSIPUG00000022233) CPT1A (ENSIPUG00000022263) igf2a (ENSIPUG00000022309) ENSIPUG00000022314 B4GALNT4 (ENSIPUG00000022345) ABTB2 (ENSIPUG00000022359) #29 BRSK2 (ENSIPUG00000022405) tsg101b (ENSIPUG00000022428) ENSIPUG00000022485 ENSIPUG00000022492 hrasb (ENSIPUG00000022502) Rassf7 (ENSIPUG00000022527) ENSIPUG00000022538 ascl1b (ENSIPUG00000022550) PAMR1 (ENSIPUG00000022552) #21 slc1a2a (ENSIPUG00000022560) #22 apip (ENSIPUG00000022579) #25 ENSIPUG00000022600 Lrrc4c (ENSIPUG00000022604) #7 ENSIPUG00000022606 hsd17b12b (ENSIPUG00000022611) ttc17 (ENSIPUG00000022641) PRC1 (ENSIPUG00000022676) vps33b (ENSIPUG00000022696) hddc3 (ENSIPUG00000022722) MFAP1 (ENSIPUG00000022735) hypk (ENSIPUG00000022746) serinc4 (ENSIPUG00000022752) adamtsl5 (ENSIPUG00000022764) ENSIPUG00000022770 iqgap1 (ENSIPUG00000022780) Characiphysae_b ANCESTRAL SPECIES 5 ENSGT00940000153525.i.b ENSGT00390000008708.g ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000159286.a.a ENSGT00940000160916 ENSGT00940000155016 ENSGT00940000158927 ENSGT00940000164520 ENSGT00390000011067.B ENSGT00700000104539.b.b ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT01000000214788.d ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000179199 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 ENSGT00690000102225 ENSGT00390000008502 ENSGT01030000234623.a.b.b ENSGT00940000160456 ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a Electric eel MODERN SPECIES 209 traf6 (ENSEEEG00000018776) #14 ENSEEEG00000018777 HAPLN3 (ENSEEEG00000018780) mfge8a (ENSEEEG00000018786) cpt1aa (ENSEEEG00000018794) igf2a (ENSEEEG00000019117) ENSEEEG00000019118 B4GALNT4 (ENSEEEG00000019120) ABTB2 (ENSEEEG00000019122) #29 BRSK2 (ENSEEEG00000019229) ENSEEEG00000019230 hrasb (ENSEEEG00000019231) rassf7b (ENSEEEG00000019235) ascl1b (ENSEEEG00000019237) PAMR1 (ENSEEEG00000019239) #21 slc1a2a (ENSEEEG00000019243) #22 ENSEEEG00000019245 apip (ENSEEEG00000019247) #25 LRRC4C (ENSEEEG00000019249) #7 ENSEEEG00000019250 ENSEEEG00000019251 hsd17b12b (ENSEEEG00000019253) ttc17 (ENSEEEG00000019260) prc1b (ENSEEEG00000019262) vps33b (ENSEEEG00000019264) hddc3 (ENSEEEG00000019272) mfap1 (ENSEEEG00000019273) hypk (ENSEEEG00000019277) SERINC4 (ENSEEEG00000019279) ENSEEEG00000019282 ENSEEEG00000019283 Characoidei ANCESTRAL SPECIES 4 ENSGT00390000014507.a.a ENSGT00940000153525.i.b ENSGT00390000008708.h.a ENSGT00940000154098.a.e ENSGT00390000004933.k.b ENSGT00940000160916 ENSGT00940000155016 ENSGT00940000158927 ENSGT00940000164520 ENSGT00390000011067.B ENSGT00700000104539.b.b ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000179199 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 ENSGT00690000102225 ENSGT00390000008502 ENSGT01030000234623.a.b.b ENSGT00940000160456 ENSGT00390000010652.C ENSGT00950000183076.a.b.b.a.a ENSGT00940000171332 Red-bellied piranha MODERN SPECIES 489 ENSPNAG00000008000 hrasb (ENSPNAG00000000584) rassf7b (ENSPNAG00000000587) ENSPNAG00000008015 ENSPNAG00000008021 FJX1 (ENSPNAG00000008022) #20 PAMR1 (ENSPNAG00000000619) #21 slc1a2a (ENSPNAG00000008062) #22 apip (ENSPNAG00000000642) #25 LRRC4C (ENSPNAG00000000649) #7 Mexicana tetra MODERN SPECIES 47 mfge8a (ENSAMXG00000007594) cpt1aa (ENSAMXG00000007601) ENSAMXG00000034619 igf2a (ENSAMXG00000039167) ENSAMXG00000007622 B4GALNT4 (ENSAMXG00000007637) ABTB2 (ENSAMXG00000007654) #29 ENSAMXG00000038973 BRSK2 (ENSAMXG00000007672) ENSAMXG00000007690 hrasb (ENSAMXG00000033907) rassf7b (ENSAMXG00000007694) ENSAMXG00000028066 ENSAMXG00000025568 PAMR1 (ENSAMXG00000003809) #21 slc1a2a (ENSAMXG00000030158) #22 ENSAMXG00000036526 #23 apip (ENSAMXG00000003826) #25 LRRC4C (ENSAMXG00000025571) #7 ENSAMXG00000032248 ENSAMXG00000034346 hsd17b12b (ENSAMXG00000035058) ttc17 (ENSAMXG00000011174) prc1b (ENSAMXG00000032966) vps33b (ENSAMXG00000040384) hddc3 (ENSAMXG00000030279) mfap1 (ENSAMXG00000036906) hypk (ENSAMXG00000030949) ENSAMXG00000034898 ENSAMXG00000038399 Cyprinoidei ANCESTRAL SPECIES 3 ENSGT00940000160588 ENSGT00530000063981.b.d #15 ENSGT00940000155426 #14 ENSGT00940000155971.d.b.a ENSGT00940000155971.d.b.b.b ENSGT00940000156049.b ENSGT01060000248595.b.a.b.a.n.b ENSGT00940000160745.c ENSGT00940000161238.l ENSGT01050000244857.A.a.b.f ENSGT00940000165530.b ENSGT00950000182839.B.b.a ENSGT00940000165300.b.a.a.a ENSGT00390000016768 #20 ENSGT00940000154234.a.d #21 ENSGT00940000155379.g.a #22 ENSGT00530000063822.a.a.p #23 ENSGT01000000214788.d ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 ENSGT00940000179199 ENSGT00940000154860.a.a ENSGT00390000006196 ENSGT00390000009453.fb.b ENSGT00940000156813 ENSGT00390000011608 ENSGT00690000102225 ENSGT00390000008502 ENSGT01030000234623.a.b.b ENSGT00940000169559 ENSGT00940000160456 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 35 ENSGT00940000155971.d.b.a ENSGT00940000156049.b.a ENSGT01060000248595.b.a.b.a.n.b.b ENSGT00940000160745.c ENSGT00940000161238.l.a ENSGT01050000244857.A.a.b.f.a ENSGT00940000157661.e.b.b #29 ENSGT00940000157462.C.c.a.l.a ENSGT00940000153903.a.b.a.a.f ENSGT00940000155653.b.d.b ENSGT00950000182839.B.b.a.b ENSGT00940000163916.g.a ENSGT00940000165300.b.a.a.a.b ENSGT00390000016768.f #20 ENSGT00940000154234.a.d.a #21 ENSGT00940000155379.g.a.m #22 ENSGT00390000001680.b #25 ENSGT00940000157405.c.b.b #7 ENSGT00940000179199.a ENSGT00940000154860.a.a.a ENSGT00390000006196.g ENSGT00990000205513 ENSGT00390000011608 ENSGT00690000102225.q.a ENSGT00390000008502.s.b ENSGT01030000234623.a.b.b.c ENSGT00940000160456.x ENSGT00390000010652.C.kc ENSGT00950000183076.a.b.b.a.a.q ENSGT00940000171332.b ENSGT00390000018319.a.a.a.b.d.a.d Goldfish MODERN SPECIES 47 cpt1aa (ENSCARG00000012769) igf2a (ENSCARG00000012839) ENSCARG00000012855 ENSCARG00000012866 B4GALNT4 (ENSCARG00000000329) ABTB2 (ENSCARG00000000407) #29 BRSK2 (ENSCARG00000000533) ENSCARG00000000723 hrasb (ENSCARG00000000755) rassf7b (ENSCARG00000000762) ENSCARG00000000771 ascl1b (ENSCARG00000000776) ENSCARG00000000780 FJX1 (ENSCARG00000000789) #20 PAMR1 (ENSCARG00000000800) #21 slc1a2a (ENSCARG00000000900) #22 apip (ENSCARG00000001051) #25 LRRC4C (ENSCARG00000001058) #7 ENSCARG00000001060 hsd17b12b (ENSCARG00000001064) ttc17 (ENSCARG00000001107) prc1b (ENSCARG00000001224) vps33b (ENSCARG00000001436) ENSCARG00000001468 mfap1 (ENSCARG00000001470) hypk (ENSCARG00000001478) SERINC4 (ENSCARG00000001482) ENSCARG00000001488 ENSCARG00000001494 ENSCARG00000001497 iqgap1 (ENSCARG00000001884) Cyprininae_a ANCESTRAL SPECIES 55 ENSGT00940000155971.d.b.a.f ENSGT00940000155971.d.b.b.b ENSGT00940000156049.b.a ENSGT01060000248595.b.a.b.a.n.b.b ENSGT00940000160745.c ENSGT00940000161238.l.a ENSGT01050000244857.A.a.b.f.a ENSGT00940000157661.e.b.b #29 ENSGT00940000157462.C.c.a.l.a ENSGT00940000153903.a.b.a.a.f ENSGT00940000155653.b.d.b ENSGT00950000182839.B.b.a.b ENSGT00940000165300.b.a.a.a.b ENSGT00390000016768.f #20 ENSGT00940000154234.a.d.a #21 ENSGT00940000155379.g.a.m #22 ENSGT00940000157405.c.b.b #7 ENSGT00940000179199.a ENSGT00940000154860.a.a.a ENSGT00390000006196.g ENSGT00940000156813.j ENSGT00390000011608 ENSGT00690000102225.r ENSGT00390000008502.t ENSGT00690000102225.q.a ENSGT00390000008502.s.b ENSGT01030000234623.a.b.b.c ENSGT00940000160456.x ENSGT00390000010652.C.kc ENSGT00950000183076.a.b.b.a.a.q ENSGT00940000171332.b Common carp reference MODERN SPECIES traf6 (ENSCCRG00000002480) #14 ENSCCRG00000002468 mfge8a (ENSCCRG00000082007) cpt1aa (ENSCCRG00000050268) igf2a (ENSCCRG00000044723) ENSCCRG00000054102 ENSCCRG00000077523 ENSCCRG00000048831 ENSCCRG00000020093 #29 ENSCCRG00000019633 ENSCCRG00000078295 rassf7b (ENSCCRG00000033471) ascl1b (ENSCCRG00000033489) FJX1 (ENSCCRG00000062310) #20 PAMR1 (ENSCCRG00000046927) #21 slc1a2a (ENSCCRG00000067907) #22 ENSCCRG00000054831 #23 LRRC4C (ENSCCRG00000067358) #7 ENSCCRG00000029758 hsd17b12b (ENSCCRG00000000780) ttc17 (ENSCCRG00000048653) prc1b (ENSCCRG00000000916) ENSCCRG00000075454 mfap1 (ENSCCRG00000006142) hypk (ENSCCRG00000006146) SERINC4 (ENSCCRG00000006151) ENSCCRG00000006162 ENSCCRG00000006169 iqgap1 (ENSCCRG00000006267) cartl (ENSCCRG00000027432) cart3 (ENSCCRG00000044218) Golden-line barbel MODERN SPECIES 4012 slc1a2a (ENSSGRG00000004659) #22 Cyprininae ANCESTRAL SPECIES 235 ENSGT00940000160588.i.b ENSGT00940000155971.d.b.b.b ENSGT00940000156049.b.b ENSGT01060000248595.b.a.b.a.n.b.a ENSGT00940000161238.l.b ENSGT01050000244857.A.a.b.f.b ENSGT00940000157661.e.b.a #29 ENSGT00940000157462.C.c.a.l.b ENSGT00940000153903.a.b.a.a.e ENSGT00940000155653.b.d.a ENSGT00950000182839.B.b.a.a ENSGT00940000163916.h ENSGT00940000165300.b.a.a.a.a ENSGT00390000016768.e #20 ENSGT00940000154234.a.d.b #21 ENSGT00940000155379.g.a.n #22 ENSGT00530000063822.a.a.p #23 ENSGT01000000214788.d ENSGT00390000001680.a #25 ENSGT00940000157405.c.b.a #7 ENSGT00940000179199.b ENSGT00940000154860.a.a.b ENSGT00390000006196.h ENSGT00390000009453.fb.b.l ENSGT00940000156813.i Cyprininae_a ANCESTRAL SPECIES 232 ENSGT00940000155426.m #14 ENSGT00940000155971.d.b.a.e ENSGT00940000156049.b.b ENSGT01060000248595.b.a.b.a.n.b.a ENSGT00940000161238.l.b ENSGT01050000244857.A.a.b.f.b ENSGT00940000157661.e.b.a #29 ENSGT00940000157462.C.c.a.l.b ENSGT00940000153903.a.b.a.a.e ENSGT00940000155653.b.d.a ENSGT00950000182839.B.b.a.a ENSGT00940000163916.h ENSGT00940000165300.b.a.a.a.a ENSGT00390000016768.e #20 ENSGT00940000154234.a.d.b #21 ENSGT00940000155379.g.a.n #22 ENSGT00530000063822.a.a.p #23 ENSGT00390000001680.a #25 ENSGT00940000157405.c.b.a #7 ENSGT00940000179199.b ENSGT00940000154860.a.a.b ENSGT00390000006196.h ENSGT00390000009453.fb.b.l ENSGT00940000156813.i Golden-line barbel MODERN SPECIES 283 B4GALNT4 (ENSSGRG00000012559) ABTB2 (ENSSGRG00000012562) #29 BRSK2 (ENSSGRG00000012997) ENSSGRG00000013116 hrasb (ENSSGRG00000013118) rassf7b (ENSSGRG00000013199) ENSSGRG00000013200 ascl1b (ENSSGRG00000013201) FJX1 (ENSSGRG00000013202) #20 PAMR1 (ENSSGRG00000013203) #21 slc1a2a (ENSSGRG00000013216) #22 apip (ENSSGRG00000013253) #25 LRRC4C (ENSSGRG00000013255) #7 ENSSGRG00000013257 hsd17b12b (ENSSGRG00000013259) ttc17 (ENSSGRG00000013330) prc1b (ENSSGRG00000013567) vps33b (ENSSGRG00000013767) mfap1 (ENSSGRG00000014564) hypk (ENSSGRG00000014594) ENSSGRG00000014595 ENSSGRG00000014597 ENSSGRG00000014598 ENSSGRG00000014600 ENSSGRG00000014601 iqgap1 (ENSSGRG00000014617) Common carp reference MODERN SPECIES 6 traf6 (ENSCCRG00000062778) #14 ENSCCRG00000075367 ENSCCRG00000040986 cpt1aa (ENSCCRG00000014043) mfge8a (ENSCCRG00000014023) ENSCCRG00000046819 ENSCCRG00000032474 ENSCCRG00000004364 #29 ENSCCRG00000004728 ENSCCRG00000050362 hrasb (ENSCCRG00000011187) rassf7b (ENSCCRG00000011193) ENSCCRG00000076922 ascl1b (ENSCCRG00000046924) FJX1 (ENSCCRG00000066816) #20 slc1a2a (ENSCCRG00000008506) #22 ENSCCRG00000057525 #23 apip (ENSCCRG00000004023) #25 LRRC4C (ENSCCRG00000061478) #7 ENSCCRG00000000755 ENSCCRG00000000870 hsd17b12b (ENSCCRG00000029737) ttc17 (ENSCCRG00000000878) prc1b (ENSCCRG00000006138) hddc3 (ENSCCRG00000062387) vps33b (ENSCCRG00000000935) mfap1 (ENSCCRG00000001619) ENSCCRG00000063374 SERINC4 (ENSCCRG00000001644) ENSCCRG00000001699 ENSCCRG00000063848 Goldfish MODERN SPECIES 25 ENSCARG00000013712 kcnq1.1 (ENSCARG00000013742) cdkn1ca (ENSCARG00000013903) trpm5 (ENSCARG00000013916) traf6 (ENSCARG00000013932) #14 cpt1aa (ENSCARG00000013955) ENSCARG00000014130 ENSCARG00000014144 BRSK2 (ENSCARG00000014193) ENSCARG00000014493 hrasb (ENSCARG00000014798) rassf7b (ENSCARG00000014802) ENSCARG00000014807 ascl1b (ENSCARG00000014817) FJX1 (ENSCARG00000014822) #20 slc1a2a (ENSCARG00000014835) #22 ENSCARG00000015065 apip (ENSCARG00000015077) #25 LRRC4C (ENSCARG00000015169) #7 ENSCARG00000015177 ENSCARG00000015181 hsd17b12b (ENSCARG00000015191) ttc17 (ENSCARG00000015317) prc1b (ENSCARG00000015896) ENSCARG00000016282 hddc3 (ENSCARG00000016288) mfap1 (ENSCARG00000016296) hypk (ENSCARG00000016329) SERINC4 (ENSCARG00000016346) ENSCARG00000016354 ENSCARG00000016378 Zebrafish MODERN SPECIES 22 ENSDARG00000035891 mfge8a (ENSDARG00000015349) cpt1aa (ENSDARG00000059770) igf2a (ENSDARG00000018643) ENSDARG00000011088 B4GALNT4 (ENSDARG00000076701) ABTB2 (ENSDARG00000059751) #29 BRSK2 (ENSDARG00000077791) ENSDARG00000011897 hrasb (ENSDARG00000005651) rassf7b (ENSDARG00000003193) ENSDARG00000009702 ascl1b (ENSDARG00000101628) FJX1 (ENSDARG00000035873) #20 PAMR1 (ENSDARG00000103184) #21 slc1a2a (ENSDARG00000052138) #22 ENSDARG00000087863 #23 apip (ENSDARG00000003132) #25 LRRC4C (ENSDARG00000016739) #7 hsd17b12b (ENSDARG00000035872) ttc17 (ENSDARG00000044812) prc1b (ENSDARG00000005993) vps33b (ENSDARG00000044813) hddc3 (ENSDARG00000020473) mfap1 (ENSDARG00000018241) hypk (ENSDARG00000059725) SERINC4 (ENSDARG00000044815) ENSDARG00000052118 ENSDARG00000052114 iqgap1 (ENSDARG00000078888) cartl (ENSDARG00000104297) Osteoglossocephalai ANCESTRAL SPECIES 59 ENSGT00940000157661.e.b #29 ENSGT00940000157462.C.c.a ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000163916 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00390000016821 ENSGT00940000157226 ENSGT00940000154860.a.b ENSGT01000000214788 ENSGT00390000001680 #25 ENSGT00940000157405.c.b #7 Clupeocephala ANCESTRAL SPECIES 124 ENSGT00940000157661.e.a #29 ENSGT00940000157661.e.b #29 ENSGT00940000157462.C.c.a ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 Otomorpha ANCESTRAL SPECIES 51 ENSGT00390000011067.B ENSGT00700000104539.b.b ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.p #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 Clupeiformes ANCESTRAL SPECIES 306 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.p #23 ENSGT01000000214788 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT01030000237590 ENSGT00940000164520 ENSGT00940000158927 Denticle herring MODERN SPECIES 8 rhcgb (ENSDCDG00000032660) POLG (ENSDCDG00000032684) fanci (ENSDCDG00000032690) FBXO31 (ENSDCDG00000032703) snapc5 (ENSDCDG00000032755) LCTL (ENSDCDG00000032757) zwilch (ENSDCDG00000032759) rpl4 (ENSDCDG00000032764) map2k1 (ENSDCDG00000032785) gdpgp1 (ENSDCDG00000032893) ENSDCDG00000032901 LDLRAD3 (ENSDCDG00000032916) #17 trim44 (ENSDCDG00000032920) #19 FJX1 (ENSDCDG00000032922) #20 PAMR1 (ENSDCDG00000032928) #21 slc1a2b (ENSDCDG00000032937) #22 ENSDCDG00000032947 pdhx (ENSDCDG00000032954) #24 ehf (ENSDCDG00000032967) #26 lrrc4ca (ENSDCDG00000032970) #7 ENSDCDG00000032973 rag2 (ENSDCDG00000032974) #12 rag1 (ENSDCDG00000032976) #13 ENSDCDG00000032979 furinb (ENSDCDG00000033090) MAN2A2 (ENSDCDG00000033683) unc45a (ENSDCDG00000033914) ENSDCDG00000034217 cib1 (ENSDCDG00000034221) ENSDCDG00000005645 rag2 (ENSDCDG00000005658) #12 Atlantic herring MODERN SPECIES 19 zgc:123278 (ENSCHAG00000017411) tsg101a (ENSCHAG00000017309) ldha (ENSCHAG00000017273) BRSK2 (ENSCHAG00000017077) ABTB2 (ENSCHAG00000016981) #29 B4GALNT4 (ENSCHAG00000016361) tmem86a (ENSCHAG00000016338) spty2d1 (ENSCHAG00000016320) ENSCHAG00000016164 ENSCHAG00000016146 th (ENSCHAG00000015392) ldlrad3 (ENSCHAG00000015369) trim44 (ENSCHAG00000015361) #19 FJX1 (ENSCHAG00000015355) #20 PAMR1 (ENSCHAG00000015347) #21 slc1a2b (ENSCHAG00000014288) #22 ENSCHAG00000014250 #23 pdhx (ENSCHAG00000014112) #24 ehf (ENSCHAG00000014103) #26 ENSCHAG00000014099 lrrc4ca (ENSCHAG00000014088) #7 ENSCHAG00000014071 rag2 (ENSCHAG00000014056) #12 rag1 (ENSCHAG00000014008) #13 ENSCHAG00000013729 furinb (ENSCHAG00000011758) MAN2A2 (ENSCHAG00000010404) unc45a (ENSCHAG00000008633) ENSCHAG00000008566 cib1 (ENSCHAG00000008498) NUDT7 (ENSCHAG00000008488) Otophysi ANCESTRAL SPECIES 85 ENSGT00390000011067.B ENSGT00700000104539.b.b ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.p #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 Characiphysae ANCESTRAL SPECIES 57 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.p #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00390000016718 Channel catfish MODERN SPECIES 5 ldhbb (ENSIPUG00000023078) slc25a3 (ENSIPUG00000023091) tmpob (ENSIPUG00000023107) ENSIPUG00000023111 pthlhb (ENSIPUG00000023113) Metap2 (ENSIPUG00000023121) ccdc173 (ENSIPUG00000023140) cib1 (ENSIPUG00000023153) rccd1 (ENSIPUG00000023149) dynlrb2 (ENSIPUG00000023160) ENSIPUG00000023178 LDLRAD3 (ENSIPUG00000023198) #17 trim44 (ENSIPUG00000024084) #19 fjx1 (ENSIPUG00000024086) #20 pamr1 (ENSIPUG00000024088) #21 slc1a2 (ENSIPUG00000024091) #22 cd44 (ENSIPUG00000024094) #23 pdhx (ENSIPUG00000024098) #24 EHF (ENSIPUG00000024101) #26 ENSIPUG00000024102 ENSIPUG00000024103 lrrc4c (ENSIPUG00000024105) #7 ENSIPUG00000024107 ENSIPUG00000024108 rag2 (ENSIPUG00000024109) #12 rag1 (ENSIPUG00000024110) #13 ENSIPUG00000024112 accs (ENSIPUG00000024114) furin (ENSIPUG00000003874) MAN2A2 (ENSIPUG00000003952) unc45a (ENSIPUG00000003978) Characiphysae_b ANCESTRAL SPECIES 32 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.p #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00390000016718 ENSGT00950000182844.b.b.b.b ENSGT00390000000453 Characoidei ANCESTRAL SPECIES 134 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.p #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00390000016718 ENSGT00950000182844.b.b.b.b ENSGT00390000000453 Red-bellied piranha MODERN SPECIES 65 golt1bb (ENSPNAG00000029944) slc25a3b (ENSPNAG00000004687) tmpob (ENSPNAG00000029931) pthlhb (ENSPNAG00000029925) ENSPNAG00000029921 ENSPNAG00000029915 metap2b (ENSPNAG00000029913) cib1 (ENSPNAG00000029904) ENSPNAG00000029898 dynlrb2 (ENSPNAG00000029890) ENSPNAG00000029870 LDLRAD3 (ENSPNAG00000029853) #17 trim44 (ENSPNAG00000029849) #19 FJX1 (ENSPNAG00000029843) #20 PAMR1 (ENSPNAG00000029839) #21 slc1a2b (ENSPNAG00000029831) #22 ENSPNAG00000029811 #23 pdhx (ENSPNAG00000029803) #24 ehf (ENSPNAG00000029789) #26 lrrc4ca (ENSPNAG00000029771) #7 ENSPNAG00000029767 rag2 (ENSPNAG00000029760) #12 rag1 (ENSPNAG00000029755) #13 ENSPNAG00000004676 accs (ENSPNAG00000029737) furinb (ENSPNAG00000029710) MAN2A2 (ENSPNAG00000029636) unc45a (ENSPNAG00000004630) gdpgp1 (ENSPNAG00000029453) rhcgb (ENSPNAG00000029436) POLG (ENSPNAG00000004568) Mexicana tetra MODERN SPECIES 23 golt1bb (ENSAMXG00000017671) ldhbb (ENSAMXG00000034429) slc25a3b (ENSAMXG00000043710) tmpob (ENSAMXG00000035536) pthlhb (ENSAMXG00000038277) ENSAMXG00000041470 metap2b (ENSAMXG00000031576) cib1 (ENSAMXG00000034631) ENSAMXG00000033102 dynlrb2 (ENSAMXG00000017637) ENSAMXG00000017626 LDLRAD3 (ENSAMXG00000039050) #17 trim44 (ENSAMXG00000036844) #19 FJX1 (ENSAMXG00000025114) #20 PAMR1 (ENSAMXG00000039055) #21 slc1a2b (ENSAMXG00000041920) #22 ENSAMXG00000033927 pdhx (ENSAMXG00000017601) #24 ehf (ENSAMXG00000031821) #26 ENSAMXG00000038530 rag2 (ENSAMXG00000024862) #12 rag1 (ENSAMXG00000017587) #13 ENSAMXG00000029248 accs (ENSAMXG00000017574) furinb (ENSAMXG00000017549) MAN2A2 (ENSAMXG00000017537) unc45a (ENSAMXG00000017488) gdpgp1 (ENSAMXG00000037147) rhcgb (ENSAMXG00000017438) POLG (ENSAMXG00000017419) fanci (ENSAMXG00000017352) Electric eel MODERN SPECIES 732 trim44 (ENSEEEG00000011290) #19 FJX1 (ENSEEEG00000011289) #20 PAMR1 (ENSEEEG00000011286) #21 slc1a2b (ENSEEEG00000011282) #22 Cyprinoidei ANCESTRAL SPECIES 16 ENSGT00530000063460.A.b ENSGT00940000173711 ENSGT00500000044987 ENSGT00940000153432.B ENSGT00390000017457 ENSGT00940000158907.d ENSGT00940000155855 ENSGT01030000234574.B.c.b.a.a.b ENSGT00390000015494 ENSGT00390000005102.id.a ENSGT00940000157438.c ENSGT00390000008853 ENSGT00940000164512.d ENSGT00440000034605 #19 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a.o #23 ENSGT00990000205567 ENSGT00390000013892 ENSGT00940000169387 ENSGT00940000160867 ENSGT00940000164390.c ENSGT00940000164390.d.a ENSGT00940000164390.d.b ENSGT00940000159527 ENSGT00950000183191.b ENSGT00940000166026 ENSGT00940000154842.a.a ENSGT00390000003213 ENSGT00940000166999.A ENSGT00910000144273 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 544 ENSGT00390000001511.a ENSGT00940000156267.ob.b.b ENSGT00550000074855 ENSGT00440000034107.a.f ENSGT00390000005534.d ENSGT00940000157182.g.a ENSGT00940000156088.c.b.a ENSGT00390000001116 ENSGT00940000158841 ENSGT00390000007852 ENSGT00950000182808.b.b ENSGT00950000182832.D.a ENSGT00940000156046 #24 ENSGT01000000214788.c ENSGT00940000154234.a.c.b #21 ENSGT00940000155379.g.b.a #22 ENSGT00530000063822.a.a.o #23 ENSGT00940000155379.g.b.b #22 ENSGT00940000154234.a.c.a.a #21 Cyprininae_a ANCESTRAL SPECIES 418 ENSGT00940000156267.ob.a.a.g ENSGT00550000074855 ENSGT00440000034107.a.f ENSGT00390000005534.d ENSGT00940000157182.g.a ENSGT00940000156088.c.b.a ENSGT00390000001116 ENSGT00940000158841 ENSGT00390000007852 ENSGT00950000182808.b.b ENSGT00940000166733 ENSGT00950000182832.D.a ENSGT00940000156046 #24 ENSGT01000000214788.c ENSGT00940000154234.a.c.b #21 ENSGT00940000155379.g.b.a #22 ENSGT00530000063822.a.a.o #23 ENSGT00940000155379.g.b.b #22 ENSGT00940000154234.a.c.a.a #21 Common carp reference MODERN SPECIES 37 ENSCCRG00000062642 ENSCCRG00000074585 ENSCCRG00000081646 ENSCCRG00000060455 ENSCCRG00000027642 ENSCCRG00000081849 ENSCCRG00000069448 ENSCCRG00000075929 ENSCCRG00000019870 ENSCCRG00000058369 ENSCCRG00000038427 ENSCCRG00000059362 ENSCCRG00000011145 ENSCCRG00000067797 ENSCCRG00000027585 #21 slc1a2b (ENSCCRG00000045722) #22 ENSCCRG00000027005 #23 ENSCCRG00000062119 #23 ENSCCRG00000062360 ENSCCRG00000042547 ENSCCRG00000035442 ENSCCRG00000080125 ENSCCRG00000081803 ENSCCRG00000039276 ENSCCRG00000060302 nup160 (ENSCCRG00000071875) frs2b (ENSCCRG00000073699) wwp2 (ENSCCRG00000024986) ENSCCRG00000062867 gabarapl2 (ENSCCRG00000072381) chst6 (ENSCCRG00000057636) Golden-line barbel MODERN SPECIES 1442 PAMR1 (ENSSGRG00000030876) #21 slc1a2b (ENSSGRG00000030888) #22 ENSSGRG00000032043 Goldfish MODERN SPECIES 17 ENSCARG00000023379 ENSCARG00000023361 ENSCARG00000023356 ENSCARG00000023353 ENSCARG00000023339 ENSCARG00000023323 PAMR1 (ENSCARG00000023282) #21 slc1a2b (ENSCARG00000022325) #22 ENSCARG00000022290 #23 ENSCARG00000022286 ENSCARG00000022277 #23 ENSCARG00000022256 ENSCARG00000022232 PTPRB (ENSCARG00000020796) ENSCARG00000020754 RPL27A (ENSCARG00000020732) ENSCARG00000020717 ENSCARG00000020704 ENSCARG00000020701 ENSCARG00000020689 ENSCARG00000020676 ENSCARG00000013849 frs2b (ENSCARG00000013833) Cyprininae ANCESTRAL SPECIES 544 ENSGT00940000154234.a.c.a.a #21 ENSGT00940000155379.g.b.b #22 ENSGT00530000063822.a.a.o #23 ENSGT00940000155379.g.b.a #22 ENSGT00940000154234.a.c.b #21 ENSGT01000000214788.c ENSGT00940000156046 #24 ENSGT00950000182832.D.a ENSGT00950000182808.b.b ENSGT00390000007852 ENSGT00940000158841 ENSGT00390000001116 ENSGT00940000156088.c.b.a ENSGT00940000157182.g.a ENSGT00390000005534.d ENSGT00440000034107.a.f ENSGT00550000074855 Goldfish MODERN SPECIES 45 cdk10 (ENSCARG00000067520) vps4a (ENSCARG00000067208) slc17a6a (ENSCARG00000067093) SNTB2 (ENSCARG00000067070) ENSCARG00000067039 chst6 (ENSCARG00000067031) tmem231 (ENSCARG00000066998) gabarapl2 (ENSCARG00000066970) adat1 (ENSCARG00000066948) wwp2 (ENSCARG00000064230) frs2b (ENSCARG00000063964) ENSCARG00000063953 ENSCARG00000063951 ENSCARG00000063943 nup160 (ENSCARG00000062807) slc1a2b (ENSCARG00000061343) #22 ENSCARG00000061142 ENSCARG00000061128 ENSCARG00000061117 pdhx (ENSCARG00000060563) #24 chmp1a (ENSCARG00000060461) slc10a3 (ENSCARG00000060444) fanca (ENSCARG00000060232) znf276 (ENSCARG00000060213) ENSCARG00000059970 ENSCARG00000059948 ENSCARG00000059712 ENSCARG00000059694 PTPRB (ENSCARG00000059156) ENSCARG00000059118 ENSCARG00000059107 Cyprininae_a ANCESTRAL SPECIES 418 ENSGT00940000154234.a.c.a.a #21 ENSGT00940000155379.g.b.b #22 ENSGT00530000063822.a.a.o #23 ENSGT00940000155379.g.b.a #22 ENSGT00940000154234.a.c.b #21 ENSGT01000000214788.c ENSGT00940000156046 #24 ENSGT00950000182832.D.a ENSGT00940000166733 ENSGT00950000182808.b.b ENSGT00390000007852 ENSGT00940000158841 ENSGT00390000001116 ENSGT00940000156088.c.b.a ENSGT00940000157182.g.a ENSGT00390000005534.d ENSGT00440000034107.a.f Common carp reference MODERN SPECIES 33 ENSCCRG00000076071 zgc:114188 (ENSCCRG00000001019) ENSCCRG00000013552 ENSCCRG00000060740 ENSCCRG00000074373 ENSCCRG00000002654 ENSCCRG00000006721 ENSCCRG00000012503 ENSCCRG00000052497 ENSCCRG00000052498 ENSCCRG00000070778 ENSCCRG00000011464 ENSCCRG00000011551 ENSCCRG00000038192 ENSCCRG00000025605 #21 SLC1A2 (ENSCCRG00000012710) #22 ENSCCRG00000024273 pdhx (ENSCCRG00000024250) #24 ENSCCRG00000069975 slc10a3 (ENSCCRG00000056725) ENSCCRG00000055753 ENSCCRG00000078546 znf276 (ENSCCRG00000023211) ENSCCRG00000066959 ENSCCRG00000040391 ENSCCRG00000025847 ENSCCRG00000070788 ENSCCRG00000039314 ENSCCRG00000078619 ENSCCRG00000068394 psma1 (ENSCCRG00000039340) Golden-line barbel MODERN SPECIES 1723 slc1a2b (ENSSGRG00000013518) #22 ENSSGRG00000015202 #23 ENSSGRG00000015203 #23 Zebrafish MODERN SPECIES 17 ENSDARG00000087752 ENSDARG00000097790 ENSDARG00000070387 ENSDARG00000088079 ENSDARG00000079843 ENSDARG00000097228 ENSDARG00000074928 ENSDARG00000077452 ENSDARG00000074062 ENSDARG00000061083 ENSDARG00000019591 ENSDARG00000051760 ldlrad3 (ENSDARG00000078600) trim44 (ENSDARG00000051761) #19 PAMR1 (ENSDARG00000093480) #21 slc1a2b (ENSDARG00000102453) #22 ENSDARG00000089892 #23 pdhx (ENSDARG00000051756) #24 chmp1a (ENSDARG00000102643) slc10a3 (ENSDARG00000103220) ENSDARG00000110103 znf276 (ENSDARG00000110991) ENSDARG00000101185 psma1 (ENSDARG00000101560) ENSDARG00000099362 Euteleosteomorpha ANCESTRAL SPECIES 20 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 Acanthomorphata ANCESTRAL SPECIES 86 ENSGT00940000166355.b ENSGT00940000164512.d ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 Tiger tail seahorse MODERN SPECIES 438 ABTB2 (ENSHCOG00000009387) #29 BRSK2 (ENSHCOG00000009433) ldha (ENSHCOG00000009461) tsg101a (ENSHCOG00000009506) zgc:123278 (ENSHCOG00000009516) hrasb (ENSHCOG00000009530) ENSHCOG00000009538 ENSHCOG00000009556 irf7 (ENSHCOG00000009561) ENSHCOG00000009571 ascl1b (ENSHCOG00000009583) ldlrad3 (ENSHCOG00000009621) trim44 (ENSHCOG00000009638) #19 FJX1 (ENSHCOG00000000793) #20 PAMR1 (ENSHCOG00000009719) #21 slc1a2b (ENSHCOG00000009734) #22 ENSHCOG00000009765 #23 pdhx (ENSHCOG00000009799) #24 ehf (ENSHCOG00000009804) #26 ENSHCOG00000009810 lrrc4ca (ENSHCOG00000009819) #7 rag2 (ENSHCOG00000009824) #12 rag1 (ENSHCOG00000009844) #13 ENSHCOG00000009856 ENSHCOG00000010109 furinb (ENSHCOG00000010168) MAN2A2 (ENSHCOG00000010183) unc45a (ENSHCOG00000010216) ENSHCOG00000010247 cib1 (ENSHCOG00000010267) ENSHCOG00000010343 Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000161995.d ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000161995.d ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00940000164520 Mangrove rivulus MODERN SPECIES 68 B4GALNT4 (ENSKMAG00000001525) ABTB2 (ENSKMAG00000001552) #29 BRSK2 (ENSKMAG00000001715) ldha (ENSKMAG00000001800) tsg101a (ENSKMAG00000001851) zgc:123278 (ENSKMAG00000001912) hrasb (ENSKMAG00000001922) ENSKMAG00000002025 ENSKMAG00000002036 irf7 (ENSKMAG00000002052) ascl1b (ENSKMAG00000002102) ldlrad3 (ENSKMAG00000002119) trim44 (ENSKMAG00000002131) #19 FJX1 (ENSKMAG00000002155) #20 PAMR1 (ENSKMAG00000002167) #21 slc1a2b (ENSKMAG00000002187) #22 ENSKMAG00000002208 #23 pdhx (ENSKMAG00000002229) #24 ENSKMAG00000002304 ehf (ENSKMAG00000002490) #26 lrrc4ca (ENSKMAG00000002507) #7 rag2 (ENSKMAG00000002517) #12 rag1 (ENSKMAG00000002533) #13 ENSKMAG00000002566 ENSKMAG00000002591 furinb (ENSKMAG00000002636) MAN2A2 (ENSKMAG00000002739) ENSKMAG00000002774 unc45a (ENSKMAG00000002797) cib1 (ENSKMAG00000002887) ENSKMAG00000002865 Turquoise killifish MODERN SPECIES 1622 BRSK2 (ENSNFUG00015017796) ldha (ENSNFUG00015017749) tsg101a (ENSNFUG00015017732) hrasb (ENSNFUG00015017722) LRRC56 (ENSNFUG00015017716) ENSNFUG00015017711 RASSF7 (ENSNFUG00015017706) PHRF1 (ENSNFUG00015017699) IRF7 (ENSNFUG00015017672) ascl1b (ENSNFUG00015017664) LDLRAD3 (ENSNFUG00015017659) #17 TRIM44 (ENSNFUG00015017652) #19 FJX1 (ENSNFUG00015017644) #20 ENSNFUG00015017641 PAMR1 (ENSNFUG00015017632) #21 slc1a2b (ENSNFUG00015017486) #22 PDHX (ENSNFUG00015017454) #24 ehf (ENSNFUG00015017449) #26 ENSNFUG00015017438 ENSNFUG00015017437 lrrc4ca (ENSNFUG00015017435) #7 ENSNFUG00015017433 rag2 (ENSNFUG00015017428) #12 rag1 (ENSNFUG00015017423) #13 ACCS (ENSNFUG00015016776) furinb (ENSNFUG00015016629) MAN2A2 (ENSNFUG00015016158) UNC45A (ENSNFUG00015015993) CIB1 (ENSNFUG00015015977) ENSNFUG00015015954 GDPGP1 (ENSNFUG00015015951) Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000161995.d ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Poeciliinae ANCESTRAL SPECIES 3 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000161995.d ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Poecilia ANCESTRAL SPECIES 5 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000161995.d ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b NAME_6 ANCESTRAL SPECIES 26 ENSGT00940000164512.d ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000161995.d ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.C.a.b Amazon molly MODERN SPECIES 265 trim44 (ENSPFOG00000013741) #19 FJX1 (ENSPFOG00000020585) #20 PAMR1 (ENSPFOG00000013756) #21 slc1a2b (ENSPFOG00000013849) #22 ENSPFOG00000013957 #23 pdhx (ENSPFOG00000013974) #24 ehf (ENSPFOG00000014011) #26 lrrc4ca (ENSPFOG00000020586) #7 rag2 (ENSPFOG00000020587) #12 rag1 (ENSPFOG00000014025) #13 rag2 (ENSPFOG00000020588) #12 accs (ENSPFOG00000014048) furinb (ENSPFOG00000014101) MAN2A2 (ENSPFOG00000014268) unc45a (ENSPFOG00000014428) cib1 (ENSPFOG00000014644) ENSPFOG00000021817 gdpgp1 (ENSPFOG00000020589) RHCG (ENSPFOG00000014651) Sailfin molly MODERN SPECIES 2048 slc1a2b (ENSPLAG00000013515) #22 ENSPLAG00000013487 pdhx (ENSPLAG00000013470) #24 odf3b (ENSPLAG00000013425) ehf (ENSPLAG00000013117) #26 Guppy MODERN SPECIES 458 ABTB2 (ENSPREG00000019630) #29 BRSK2 (ENSPREG00000019521) ldha (ENSPREG00000019471) tsg101a (ENSPREG00000019375) zgc:123278 (ENSPREG00000019343) hrasb (ENSPREG00000019341) LRRC56 (ENSPREG00000019325) RASSF7 (ENSPREG00000019305) irf7 (ENSPREG00000019278) ascl1b (ENSPREG00000019266) ENSPREG00000019249 LDLRAD3 (ENSPREG00000019228) #17 trim44 (ENSPREG00000019211) #19 FJX1 (ENSPREG00000019196) #20 PAMR1 (ENSPREG00000019160) #21 slc1a2b (ENSPREG00000019113) #22 ENSPREG00000019099 #23 pdhx (ENSPREG00000019081) #24 ENSPREG00000019072 ehf (ENSPREG00000019055) #26 lrrc4ca (ENSPREG00000019038) #7 ENSPREG00000019027 rag2 (ENSPREG00000019019) #12 rag1 (ENSPREG00000019000) #13 ENSPREG00000018982 accs (ENSPREG00000018965) furinb (ENSPREG00000018908) MAN2A2 (ENSPREG00000018857) unc45a (ENSPREG00000018757) ENSPREG00000018733 cib1 (ENSPREG00000018706) Platyfish MODERN SPECIES 11 ABTB2 (ENSXMAG00000015256) #29 BRSK2 (ENSXMAG00000015186) ldha (ENSXMAG00000022304) tsg101a (ENSXMAG00000015140) ENSXMAG00000027469 hrasb (ENSXMAG00000015132) LRRC56 (ENSXMAG00000015130) RASSF7 (ENSXMAG00000015112) ENSXMAG00000027218 irf7 (ENSXMAG00000015063) ascl1b (ENSXMAG00000019890) LDLRAD3 (ENSXMAG00000000769) #17 trim44 (ENSXMAG00000028604) #19 FJX1 (ENSXMAG00000020250) #20 PAMR1 (ENSXMAG00000000785) #21 slc1a2b (ENSXMAG00000000796) #22 ENSXMAG00000024184 #23 pdhx (ENSXMAG00000000802) #24 ENSXMAG00000000808 ehf (ENSXMAG00000021987) #26 lrrc4ca (ENSXMAG00000020251) #7 ENSXMAG00000024632 rag2 (ENSXMAG00000020252) #12 rag1 (ENSXMAG00000000820) #13 accs (ENSXMAG00000000823) furinb (ENSXMAG00000000832) MAN2A2 (ENSXMAG00000000851) unc45a (ENSXMAG00000000874) ENSXMAG00000000887 ENSXMAG00000021896 gdpgp1 (ENSXMAG00000020253) NAME_4 ANCESTRAL SPECIES 51 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a.h ENSGT01030000234638.b.b.c.a.g ENSGT00940000159320 ENSGT00940000164520 ENSGT01100000263523.I.a.a.a.a.b ENSGT00940000158927 Mummichog MODERN SPECIES 529 ABTB2 (ENSFHEG00000010362) #29 BRSK2 (ENSFHEG00000010260) ldha (ENSFHEG00000010165) tsg101a (ENSFHEG00000010111) zgc:123278 (ENSFHEG00000010061) hrasb (ENSFHEG00000010055) LRRC56 (ENSFHEG00000010046) RASSF7 (ENSFHEG00000010036) ENSFHEG00000010014 irf7 (ENSFHEG00000009999) ascl1b (ENSFHEG00000009951) LDLRAD3 (ENSFHEG00000009941) #17 trim44 (ENSFHEG00000009931) #19 FJX1 (ENSFHEG00000009907) #20 PAMR1 (ENSFHEG00000009886) #21 slc1a2b (ENSFHEG00000009858) #22 ENSFHEG00000009811 #23 pdhx (ENSFHEG00000009802) #24 ehf (ENSFHEG00000009788) #26 ENSFHEG00000009754 lrrc4ca (ENSFHEG00000009747) #7 rag2 (ENSFHEG00000009732) #12 rag1 (ENSFHEG00000009721) #13 ENSFHEG00000009705 accs (ENSFHEG00000009688) furinb (ENSFHEG00000009621) ENSFHEG00000009580 ENSFHEG00000009570 MAN2A2 (ENSFHEG00000009555) ENSFHEG00000009406 ENSFHEG00000009363 Sheepshead minnow MODERN SPECIES 236 ENSCVAG00000008958 ABTB2 (ENSCVAG00000008943) #29 BRSK2 (ENSCVAG00000008879) ldha (ENSCVAG00000008785) tsg101a (ENSCVAG00000008740) zgc:123278 (ENSCVAG00000008680) hrasb (ENSCVAG00000008670) ENSCVAG00000008655 ENSCVAG00000008637 irf7 (ENSCVAG00000008618) ascl1b (ENSCVAG00000008611) LDLRAD3 (ENSCVAG00000008601) #17 trim44 (ENSCVAG00000008598) #19 FJX1 (ENSCVAG00000008596) #20 PAMR1 (ENSCVAG00000008588) #21 slc1a2b (ENSCVAG00000008567) #22 ENSCVAG00000008531 pdhx (ENSCVAG00000008521) #24 ehf (ENSCVAG00000008492) #26 Oryzias ANCESTRAL SPECIES 16 ENSGT00950000182976.a.b.c ENSGT01060000248747.b ENSGT01060000248747.a ENSGT00390000013482 ENSGT00940000156734.a ENSGT00940000163989.a.a ENSGT00940000177633 ENSGT00940000165958 ENSGT00940000165986 ENSGT00390000002142 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a.j ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00950000182844.b.b.b.a.b Oryzias_b ANCESTRAL SPECIES ENSGT00940000157402 ENSGT00940000155960.a ##37 ENSGT00530000063472.b.b.a.b.a.b #36 ENSGT00940000154910.b.a ENSGT00940000155948.b.b ENSGT00940000163989.a.a ENSGT00940000177633 ENSGT00940000165958 ENSGT00940000165986 ENSGT00390000002142 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a.j ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00950000182844.b.b.b.a.b Indian medaka MODERN SPECIES 15 tcp11l1 (ENSOMEG00000012709) hipk3a (ENSOMEG00000012667) ##37 ENSOMEG00000012596 #36 spon1b (ENSOMEG00000012575) ENSOMEG00000000752 syt9b (ENSOMEG00000012516) ENSOMEG00000012472 ENSOMEG00000012363 ano10b (ENSOMEG00000012342) fa2h (ENSOMEG00000012275) ascl1b (ENSOMEG00000012237) LDLRAD3 (ENSOMEG00000012227) #17 trim44 (ENSOMEG00000012206) #19 FJX1 (ENSOMEG00000012186) #20 PAMR1 (ENSOMEG00000012179) #21 slc1a2b (ENSOMEG00000012153) #22 ENSOMEG00000012117 #23 pdhx (ENSOMEG00000012101) #24 ENSOMEG00000012074 ehf (ENSOMEG00000012063) #26 lrrc4ca (ENSOMEG00000012048) #7 rag2 (ENSOMEG00000012037) #12 rag1 (ENSOMEG00000012023) #13 ENSOMEG00000012019 ENSOMEG00000012012 furinb (ENSOMEG00000011977) MAN2A2 (ENSOMEG00000011939) unc45a (ENSOMEG00000011869) ENSOMEG00000011832 cib1 (ENSOMEG00000011801) ENSOMEG00000011744 Javanese ricefish MODERN SPECIES 20 hipk3a (ENSOJAG00000002377) ##37 tcp11l1 (ENSOJAG00000002326) DEPDC7 (ENSOJAG00000002304) ENSOJAG00000002292 wt1a (ENSOJAG00000001939) ENSOJAG00000001815 ENSOJAG00000001811 snrkb (ENSOJAG00000001802) ano10b (ENSOJAG00000001784) fa2h (ENSOJAG00000001775) ascl1b (ENSOJAG00000001758) ENSOJAG00000001736 trim44 (ENSOJAG00000001710) #19 FJX1 (ENSOJAG00000001695) #20 PAMR1 (ENSOJAG00000001675) #21 slc1a2b (ENSOJAG00000001554) #22 ENSOJAG00000001532 #23 pdhx (ENSOJAG00000001440) #24 ehf (ENSOJAG00000001412) #26 lrrc4ca (ENSOJAG00000001410) #7 ENSOJAG00000001407 ENSOJAG00000001404 rag2 (ENSOJAG00000001399) #12 rag1 (ENSOJAG00000001392) #13 ENSOJAG00000001362 furinb (ENSOJAG00000001307) MAN2A2 (ENSOJAG00000001147) unc45a (ENSOJAG00000000829) ENSOJAG00000000732 cib1 (ENSOJAG00000000706) ENSOJAG00000000682 Oryzias_a ANCESTRAL SPECIES 1 ENSGT00950000182976.a.b.c ENSGT00940000157402 ENSGT00940000155960.a ##37 ENSGT00530000063472.b.b.a.b.a.b #36 ENSGT00940000154910.b.a ENSGT00940000155948.b.b ENSGT00940000163989.a.a ENSGT00940000165958 ENSGT00940000165986 ENSGT00390000002142 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a.j ENSGT00940000159320 ENSGT00940000158927.g ENSGT00940000164520 ENSGT00940000158927.h ENSGT01100000263523.I.a.a.a.a.b Chinese medaka MODERN SPECIES 373 ENSOSIG00000008196 ENSOSIG00000008192 ENSOSIG00000008197 ENSOSIG00000008199 snrkb (ENSOSIG00000008200) ano10b (ENSOSIG00000008203) fa2h (ENSOSIG00000008205) ascl1b (ENSOSIG00000008207) LDLRAD3 (ENSOSIG00000008208) #17 PAMR1 (ENSOSIG00000008211) #21 slc1a2b (ENSOSIG00000008220) #22 ENSOSIG00000009302 #23 pdhx (ENSOSIG00000009304) #24 ENSOSIG00000009303 ehf (ENSOSIG00000009305) #26 lrrc4ca (ENSOSIG00000009307) #7 rag2 (ENSOSIG00000009308) #12 rag1 (ENSOSIG00000009309) #13 ENSOSIG00000009320 furinb (ENSOSIG00000009550) ENSOSIG00000010358 unc45a (ENSOSIG00000010493) ENSOSIG00000015141 cib1 (ENSOSIG00000015144) cib1 (ENSOSIG00000015145) ENSOSIG00000015148 Japanese Medaka HdrR MODERN SPECIES 20 hipk3a (ENSORLG00000012316) ##37 ENSORLG00000012280 #36 ENSORLG00000030391 spon1b (ENSORLG00000022797) syt9b (ENSORLG00000012262) ENSORLG00000023764 ENSORLG00000012219 snrkb (ENSORLG00000012161) ano10b (ENSORLG00000012156) fa2h (ENSORLG00000012136) ascl1b (ENSORLG00000012117) ENSORLG00000026838 trim44 (ENSORLG00000022859) #19 FJX1 (ENSORLG00000012093) #20 PAMR1 (ENSORLG00000012089) #21 slc1a2b (ENSORLG00000012070) #22 ENSORLG00000029763 #23 pdhx (ENSORLG00000012036) #24 ENSORLG00000012011 ehf (ENSORLG00000011996) #26 ENSORLG00000026417 ENSORLG00000029874 rag2 (ENSORLG00000011979) #12 rag1 (ENSORLG00000011969) #13 ENSORLG00000011949 ENSORLG00000011944 furinb (ENSORLG00000011931) MAN2A2 (ENSORLG00000011897) unc45a (ENSORLG00000011861) cib1 (ENSORLG00000022862) ENSORLG00000011767 Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 Cichlidae ANCESTRAL SPECIES 5 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759.f.a.a.a.b ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759.f.a.a.a.b ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Haplochromini ANCESTRAL SPECIES ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759.f.a.a.a.b ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Burton s mouthbrooder MODERN SPECIES 589 ENSHBUG00000017377 ENSHBUG00000017383 irf7 (ENSHBUG00000017417) ascl1b (ENSHBUG00000017436) LDLRAD3 (ENSHBUG00000017450) #17 trim44 (ENSHBUG00000017461) #19 FJX1 (ENSHBUG00000017463) #20 PAMR1 (ENSHBUG00000017491) #21 slc1a2b (ENSHBUG00000017540) #22 ENSHBUG00000017554 #23 pdhx (ENSHBUG00000017589) #24 ehf (ENSHBUG00000017600) #26 Haplochromini_A ANCESTRAL SPECIES 1 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759.f.a.a.a.b.b.a ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT00940000180603 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Haplochromini_B ANCESTRAL SPECIES 40 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000163759.f.a.a.a.b.b.a.b.a ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT00940000180603 ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.L.d.b Eastern happy MODERN SPECIES 19 BRSK2 (ENSACLG00000001508) ldha (ENSACLG00000001291) tsg101a (ENSACLG00000001235) zgc:123278 (ENSACLG00000001212) ENSACLG00000001204 hrasb (ENSACLG00000001181) LRRC56 (ENSACLG00000001154) RASSF7 (ENSACLG00000001135) ENSACLG00000001115 irf7 (ENSACLG00000001080) ascl1b (ENSACLG00000001059) LDLRAD3 (ENSACLG00000001043) #17 trim44 (ENSACLG00000000820) #19 FJX1 (ENSACLG00000000811) #20 PAMR1 (ENSACLG00000000795) #21 slc1a2b (ENSACLG00000000753) #22 pdhx (ENSACLG00000000724) #24 ehf (ENSACLG00000000532) #26 ENSACLG00000000214 lrrc4ca (ENSACLG00000027884) #7 rag2 (ENSACLG00000027865) #12 rag1 (ENSACLG00000027862) #13 ENSACLG00000027859 ENSACLG00000027857 furinb (ENSACLG00000027853) MAN2A2 (ENSACLG00000027827) unc45a (ENSACLG00000027814) ENSACLG00000027810 cib1 (ENSACLG00000027808) ENSACLG00000027805 gdpgp1 (ENSACLG00000027803) Zebra mbuna MODERN SPECIES 1110 BRSK2 (ENSMZEG00005017531) ENSMZEG00005017545 ldha (ENSMZEG00005017554) tsg101a (ENSMZEG00005017560) zgc:123278 (ENSMZEG00005017576) hrasb (ENSMZEG00005017583) ENSMZEG00005017590 RASSF7 (ENSMZEG00005017596) ENSMZEG00005017602 irf7 (ENSMZEG00005017610) ascl1b (ENSMZEG00005017616) LDLRAD3 (ENSMZEG00005017622) #17 trim44 (ENSMZEG00005017628) #19 FJX1 (ENSMZEG00005017634) #20 PAMR1 (ENSMZEG00005017643) #21 slc1a2b (ENSMZEG00005017667) #22 pdhx (ENSMZEG00005017679) #24 ehf (ENSMZEG00005017684) #26 rag2 (ENSMZEG00005017702) #12 rag1 (ENSMZEG00005017704) #13 ENSMZEG00005017712 ENSMZEG00005017717 furinb (ENSMZEG00005017729) ENSMZEG00005017752 MAN2A2 (ENSMZEG00005017756) unc45a (ENSMZEG00005017766) ENSMZEG00005017772 cib1 (ENSMZEG00005017777) ENSMZEG00005017779 gdpgp1 (ENSMZEG00005017782) RHCG (ENSMZEG00005017785) P. nyererei MODERN SPECIES 373 ABTB2 (ENSPNYG00000015269) #29 BRSK2 (ENSPNYG00000015210) ldha (ENSPNYG00000015184) tsg101a (ENSPNYG00000015156) zgc:123278 (ENSPNYG00000015139) hrasb (ENSPNYG00000015124) ENSPNYG00000015110 RASSF7 (ENSPNYG00000015084) ENSPNYG00000015069 irf7 (ENSPNYG00000015033) ascl1b (ENSPNYG00000015020) LDLRAD3 (ENSPNYG00000015010) #17 trim44 (ENSPNYG00000014999) #19 FJX1 (ENSPNYG00000014989) #20 PAMR1 (ENSPNYG00000014973) #21 slc1a2b (ENSPNYG00000014946) #22 pdhx (ENSPNYG00000014936) #24 ehf (ENSPNYG00000014926) #26 lrrc4ca (ENSPNYG00000014911) #7 rag2 (ENSPNYG00000014893) #12 rag1 (ENSPNYG00000014878) #13 ENSPNYG00000014867 accs (ENSPNYG00000014681) furinb (ENSPNYG00000014615) ENSPNYG00000014601 MAN2A2 (ENSPNYG00000014574) unc45a (ENSPNYG00000014531) ENSPNYG00000014501 cib1 (ENSPNYG00000014471) ENSPNYG00000014432 gdpgp1 (ENSPNYG00000014416) Lyretail cichlid MODERN SPECIES 305 B4GALNT4 (ENSNBRG00000006940) ABTB2 (ENSNBRG00000006897) #29 BRSK2 (ENSNBRG00000006861) ldha (ENSNBRG00000006820) tsg101a (ENSNBRG00000006692) hrasb (ENSNBRG00000006222) ENSNBRG00000006170 RASSF7 (ENSNBRG00000006154) ENSNBRG00000006089 irf7 (ENSNBRG00000006057) ascl1b (ENSNBRG00000006042) LDLRAD3 (ENSNBRG00000005978) #17 trim44 (ENSNBRG00000005966) #19 FJX1 (ENSNBRG00000005962) #20 PAMR1 (ENSNBRG00000005954) #21 slc1a2b (ENSNBRG00000005920) #22 pdhx (ENSNBRG00000005863) #24 ehf (ENSNBRG00000005836) #26 rag2 (ENSNBRG00000005790) #12 rag1 (ENSNBRG00000005769) #13 ENSNBRG00000005755 ENSNBRG00000005597 furinb (ENSNBRG00000005509) MAN2A2 (ENSNBRG00000005430) ENSNBRG00000005393 ENSNBRG00000005382 cib1 (ENSNBRG00000005358) ENSNBRG00000005233 ENSNBRG00000005213 RHCG (ENSNBRG00000005179) TVP23A (ENSNBRG00000005139) Nile tilapia MODERN SPECIES 19 B4GALNT4 (ENSONIG00000014531) ABTB2 (ENSONIG00000014537) #29 BRSK2 (ENSONIG00000014540) ldha (ENSONIG00000014546) tsg101a (ENSONIG00000014551) zgc:123278 (ENSONIG00000014558) hras (ENSONIG00000032375) LRRC56 (ENSONIG00000014563) RASSF7 (ENSONIG00000014567) ENSONIG00000014569 irf7 (ENSONIG00000014571) ascl1b (ENSONIG00000020440) trim44 (ENSONIG00000014576) #19 FJX1 (ENSONIG00000014577) #20 PAMR1 (ENSONIG00000014578) #21 slc1a2b (ENSONIG00000014579) #22 ENSONIG00000034287 ENSONIG00000027761 #23 pdhx (ENSONIG00000014588) #24 ehf (ENSONIG00000014592) #26 ENSONIG00000033378 ENSONIG00000040185 lrrc4ca (ENSONIG00000020441) #7 ENSONIG00000036587 ENSONIG00000035296 rag2 (ENSONIG00000020442) #12 rag1 (ENSONIG00000014593) #13 ENSONIG00000014595 furinb (ENSONIG00000014600) MAN2A2 (ENSONIG00000014603) unc45a (ENSONIG00000014611) Midas cichlid MODERN SPECIES 107 ABTB2 (ENSACIG00000000525) #29 BRSK2 (ENSACIG00000000572) ENSACIG00000000617 ldha (ENSACIG00000000628) tsg101a (ENSACIG00000000649) zgc:123278 (ENSACIG00000000684) hrasb (ENSACIG00000000699) ENSACIG00000000724 ENSACIG00000000840 irf7 (ENSACIG00000000883) ascl1b (ENSACIG00000001189) LDLRAD3 (ENSACIG00000001209) #17 trim44 (ENSACIG00000001250) #19 FJX1 (ENSACIG00000001263) #20 PAMR1 (ENSACIG00000001270) #21 slc1a2b (ENSACIG00000001342) #22 ENSACIG00000001375 pdhx (ENSACIG00000001382) #24 ehf (ENSACIG00000001410) #26 Pomacentridae ANCESTRAL SPECIES 1 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00950000183478 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Pomacentridae_A ANCESTRAL SPECIES 27 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Amphiprion ANCESTRAL SPECIES 21 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Clown anemonefish MODERN SPECIES 3563 trim44 (ENSAOCG00000021940) #19 FJX1 (ENSAOCG00000001595) #20 PAMR1 (ENSAOCG00000021899) #21 slc1a2b (ENSAOCG00000021798) #22 ENSAOCG00000021751 #23 pdhx (ENSAOCG00000021723) #24 ehf (ENSAOCG00000021674) #26 Orange clownfish MODERN SPECIES 18 BRSK2 (ENSAPEG00000009703) ldha (ENSAPEG00000009620) tsg101a (ENSAPEG00000009574) zgc:123278 (ENSAPEG00000009560) hrasb (ENSAPEG00000009546) LRRC56 (ENSAPEG00000009535) ENSAPEG00000009517 RASSF7 (ENSAPEG00000009490) irf7 (ENSAPEG00000009447) ascl1b (ENSAPEG00000009432) ENSAPEG00000009404 LDLRAD3 (ENSAPEG00000009389) #17 trim44 (ENSAPEG00000009379) #19 FJX1 (ENSAPEG00000009359) #20 PAMR1 (ENSAPEG00000009342) #21 slc1a2b (ENSAPEG00000009316) #22 ENSAPEG00000009285 #23 pdhx (ENSAPEG00000009229) #24 ehf (ENSAPEG00000009186) #26 ENSAPEG00000009157 lrrc4ca (ENSAPEG00000009138) #7 rag2 (ENSAPEG00000009108) #12 rag1 (ENSAPEG00000009092) #13 ENSAPEG00000009075 ENSAPEG00000009069 furinb (ENSAPEG00000008969) MAN2A2 (ENSAPEG00000008861) unc45a (ENSAPEG00000008776) ENSAPEG00000008707 cib1 (ENSAPEG00000008723) ENSAPEG00000008690 Spiny chromis MODERN SPECIES 73 ABTB2 (ENSAPOG00000023899) #29 BRSK2 (ENSAPOG00000023798) ldha (ENSAPOG00000023749) tsg101a (ENSAPOG00000023730) zgc:123278 (ENSAPOG00000023694) hrasb (ENSAPOG00000023684) LRRC56 (ENSAPOG00000023670) RASSF7 (ENSAPOG00000023652) ENSAPOG00000023634 irf7 (ENSAPOG00000023591) ascl1b (ENSAPOG00000023536) LDLRAD3 (ENSAPOG00000023510) #17 trim44 (ENSAPOG00000023490) #19 FJX1 (ENSAPOG00000023450) #20 PAMR1 (ENSAPOG00000023444) #21 slc1a2b (ENSAPOG00000023393) #22 ENSAPOG00000023309 #23 pdhx (ENSAPOG00000023280) #24 ehf (ENSAPOG00000023227) #26 Bicolor damselfish MODERN SPECIES 296 PAMR1 (ENSSPAG00000014552) #21 slc1a2b (ENSSPAG00000014576) #22 ENSSPAG00000014601 #23 pdhx (ENSSPAG00000014621) #24 ehf (ENSSPAG00000014643) #26 lrrc4ca (ENSSPAG00000014658) #7 ENSSPAG00000014673 rag2 (ENSSPAG00000014710) #12 rag1 (ENSSPAG00000014727) #13 ENSSPAG00000014731 ENSSPAG00000014744 ENSSPAG00000014759 furinb (ENSSPAG00000014769) MAN2A2 (ENSSPAG00000014801) unc45a (ENSSPAG00000014837) ENSSPAG00000014891 ENSSPAG00000014917 Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Tetraodontidae ANCESTRAL SPECIES 11 ENSGT00940000165530.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b Fugu MODERN SPECIES 21 ABTB2 (ENSTRUG00000010317) #29 BRSK2 (ENSTRUG00000010512) ldha (ENSTRUG00000010800) tsg101a (ENSTRUG00000010968) zgc:123278 (ENSTRUG00000027355) hrasb (ENSTRUG00000024825) LRRC56 (ENSTRUG00000011257) RASSF7 (ENSTRUG00000011270) ENSTRUG00000011347 irf7 (ENSTRUG00000011418) ascl1b (ENSTRUG00000011651) LDLRAD3 (ENSTRUG00000011658) #17 trim44 (ENSTRUG00000003246) #19 FJX1 (ENSTRUG00000003190) #20 PAMR1 (ENSTRUG00000029931) #21 slc1a2b (ENSTRUG00000002723) #22 ENSTRUG00000024875 #23 pdhx (ENSTRUG00000002330) #24 ehf (ENSTRUG00000002146) #26 lrrc4ca (ENSTRUG00000002096) #7 rag2 (ENSTRUG00000019732) #12 rag1 (ENSTRUG00000001340) #13 accs (ENSTRUG00000001037) furinb (ENSTRUG00000021903) MAN2A2 (ENSTRUG00000000691) gdpgp1 (ENSTRUG00000030116) rhcg (ENSTRUG00000000450) POLG (ENSTRUG00000000388) fanci (ENSTRUG00000000347) FBXO31 (ENSTRUG00000000333) ENSTRUG00000021061 Tetraodon MODERN SPECIES 4 ENSTNIG00000010453 ENSTNIG00000001158 #29 BRSK2 (ENSTNIG00000011388) ldha (ENSTNIG00000011387) tsg101a (ENSTNIG00000011386) hrasb (ENSTNIG00000011385) ENSTNIG00000011384 RASSF7 (ENSTNIG00000011383) ENSTNIG00000011382 irf7 (ENSTNIG00000011381) ascl1b (ENSTNIG00000011380) ldlrad3 (ENSTNIG00000011379) trim44 (ENSTNIG00000011378) #19 FJX1 (ENSTNIG00000011377) #20 PAMR1 (ENSTNIG00000011376) #21 slc1a2b (ENSTNIG00000011375) #22 ENSTNIG00000001093 #23 pdhx (ENSTNIG00000011374) #24 ehf (ENSTNIG00000011373) #26 rag2 (ENSTNIG00000012169) #12 rag1 (ENSTNIG00000012168) #13 accs (ENSTNIG00000012167) furinb (ENSTNIG00000012166) MAN2A2 (ENSTNIG00000012165) unc45a (ENSTNIG00000012164) ENSTNIG00000012163 cib1 (ENSTNIG00000012162) ENSTNIG00000000322 RHCG (ENSTNIG00000012161) POLG (ENSTNIG00000012160) fanci (ENSTNIG00000012159) Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Ballan wrasse MODERN SPECIES 6 BRSK2 (ENSLBEG00000002070) ldha (ENSLBEG00000002015) tsg101a (ENSLBEG00000001961) zgc:123278 (ENSLBEG00000001928) hrasb (ENSLBEG00000001905) LRRC56 (ENSLBEG00000001887) RASSF7 (ENSLBEG00000001838) ENSLBEG00000001803 irf7 (ENSLBEG00000001747) ascl1b (ENSLBEG00000001730) ENSLBEG00000001704 ldlrad3 (ENSLBEG00000001663) trim44 (ENSLBEG00000001630) #19 FJX1 (ENSLBEG00000001614) #20 PAMR1 (ENSLBEG00000001590) #21 slc1a2b (ENSLBEG00000001522) #22 pdhx (ENSLBEG00000001440) #24 ehf (ENSLBEG00000001410) #26 lrrc4ca (ENSLBEG00000001381) #7 ENSLBEG00000001349 ENSLBEG00000001288 rag2 (ENSLBEG00000001266) #12 rag1 (ENSLBEG00000001232) #13 ENSLBEG00000001214 ENSLBEG00000001202 furinb (ENSLBEG00000001124) MAN2A2 (ENSLBEG00000000994) unc45a (ENSLBEG00000000903) ENSLBEG00000000874 cib1 (ENSLBEG00000000888) ENSLBEG00000000647 Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Perciformes ANCESTRAL SPECIES 7 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b Cottioidei ANCESTRAL SPECIES 6 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b Lumpfish MODERN SPECIES 21 BRSK2 (ENSCLMG00005022972) ldha (ENSCLMG00005022968) tsg101a (ENSCLMG00005022965) zgc:123278 (ENSCLMG00005022963) hrasb (ENSCLMG00005022962) ENSCLMG00005022961 RASSF7 (ENSCLMG00005022959) ENSCLMG00005022957 ENSCLMG00005022955 irf7 (ENSCLMG00005022952) ascl1b (ENSCLMG00005022948) LDLRAD3 (ENSCLMG00005022946) #17 trim44 (ENSCLMG00005022943) #19 FJX1 (ENSCLMG00005022941) #20 PAMR1 (ENSCLMG00005022939) #21 slc1a2b (ENSCLMG00005022927) #22 pdhx (ENSCLMG00005022921) #24 ehf (ENSCLMG00005022919) #26 rag2 (ENSCLMG00005022917) #12 rag1 (ENSCLMG00005022916) #13 ENSCLMG00005022913 furinb (ENSCLMG00005022906) MAN2A2 (ENSCLMG00005022879) unc45a (ENSCLMG00005022790) ENSCLMG00005022776 cib1 (ENSCLMG00005022775) ENSCLMG00005022773 gdpgp1 (ENSCLMG00005022771) RHCG (ENSCLMG00005022757) TVP23A (ENSCLMG00005022746) POLG (ENSCLMG00005022712) Stickleback MODERN SPECIES 14 ENSGACG00000011247 ABTB2 (ENSGACG00000011253) #29 BRSK2 (ENSGACG00000011262) ldha (ENSGACG00000011270) tsg101a (ENSGACG00000011311) hrasb (ENSGACG00000011340) ENSGACG00000011344 RASSF7 (ENSGACG00000011348) ENSGACG00000011362 irf7 (ENSGACG00000011372) ascl1b (ENSGACG00000011375) LDLRAD3 (ENSGACG00000011379) #17 trim44 (ENSGACG00000011381) #19 FJX1 (ENSGACG00000011388) #20 PAMR1 (ENSGACG00000011389) #21 slc1a2b (ENSGACG00000011397) #22 ENSGACG00000011430 #23 pdhx (ENSGACG00000011437) #24 ehf (ENSGACG00000011446) #26 lrrc4ca (ENSGACG00000011459) #7 rag2 (ENSGACG00000011461) #12 rag1 (ENSGACG00000011465) #13 ENSGACG00000011466 furinb (ENSGACG00000011478) MAN2A2 (ENSGACG00000011484) unc45a (ENSGACG00000011505) ENSGACG00000011535 cib1 (ENSGACG00000011538) gdpgp1 (ENSGACG00000011544) RHCG (ENSGACG00000011548) TVP23A (ENSGACG00000011564) Perciformes_a ANCESTRAL SPECIES 7 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000174496 ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b Channel bull blenny MODERN SPECIES 20 BRSK2 (ENSCGOG00000017777) ldha (ENSCGOG00000018548) tsg101a (ENSCGOG00000018865) zgc:123278 (ENSCGOG00000018939) hrasb (ENSCGOG00000018941) LRRC56 (ENSCGOG00000018975) RASSF7 (ENSCGOG00000018976) ENSCGOG00000018978 ENSCGOG00000018980 irf7 (ENSCGOG00000018982) ascl1b (ENSCGOG00000019039) LDLRAD3 (ENSCGOG00000019041) #17 trim44 (ENSCGOG00000019048) #19 FJX1 (ENSCGOG00000019051) #20 PAMR1 (ENSCGOG00000019053) #21 slc1a2b (ENSCGOG00000019088) #22 ENSCGOG00000019119 #23 pdhx (ENSCGOG00000019125) #24 ehf (ENSCGOG00000019153) #26 lrrc4ca (ENSCGOG00000019157) #7 rag2 (ENSCGOG00000019159) #12 rag1 (ENSCGOG00000019160) #13 ENSCGOG00000019167 furinb (ENSCGOG00000019360) unc45a (ENSCGOG00000019772) ENSCGOG00000019959 cib1 (ENSCGOG00000019962) ENSCGOG00000019991 gdpgp1 (ENSCGOG00000020001) RHCG (ENSCGOG00000020005) TVP23A (ENSCGOG00000020205) Pike perch MODERN SPECIES 6 BRSK2 (ENSSLUG00000024148) ldha (ENSSLUG00000024139) ENSSLUG00000024135 tsg101a (ENSSLUG00000024123) ENSSLUG00000024112 hrasb (ENSSLUG00000024105) ENSSLUG00000024099 RASSF7 (ENSSLUG00000024088) ENSSLUG00000024083 irf7 (ENSSLUG00000024072) ascl1b (ENSSLUG00000024066) LDLRAD3 (ENSSLUG00000024062) #17 trim44 (ENSSLUG00000024051) #19 FJX1 (ENSSLUG00000024047) #20 PAMR1 (ENSSLUG00000024031) #21 slc1a2b (ENSSLUG00000023885) #22 ENSSLUG00000023841 #23 pdhx (ENSSLUG00000023835) #24 ehf (ENSSLUG00000023827) #26 ENSSLUG00000023825 lrrc4ca (ENSSLUG00000023823) #7 rag2 (ENSSLUG00000023820) #12 rag1 (ENSSLUG00000023817) #13 ENSSLUG00000023782 furinb (ENSSLUG00000023556) MAN2A2 (ENSSLUG00000023397) unc45a (ENSSLUG00000021945) ENSSLUG00000021846 cib1 (ENSSLUG00000021842) ENSSLUG00000021835 gdpgp1 (ENSSLUG00000021833) Eupecaria_C ANCESTRAL SPECIES 6 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Gilthead seabream MODERN SPECIES 22 ABTB2 (ENSSAUG00010022380) #29 BRSK2 (ENSSAUG00010022402) ldha (ENSSAUG00010022447) tsg101a (ENSSAUG00010022458) zgc:123278 (ENSSAUG00010022484) hrasb (ENSSAUG00010022485) LRRC56 (ENSSAUG00010022487) RASSF7 (ENSSAUG00010022488) ENSSAUG00010022489 irf7 (ENSSAUG00010022492) ascl1b (ENSSAUG00010022494) LDLRAD3 (ENSSAUG00010022495) #17 trim44 (ENSSAUG00010022496) #19 FJX1 (ENSSAUG00010022498) #20 PAMR1 (ENSSAUG00010022499) #21 slc1a2b (ENSSAUG00010022503) #22 ENSSAUG00010023073 pdhx (ENSSAUG00010023074) #24 ehf (ENSSAUG00010023077) #26 lrrc4ca (ENSSAUG00010023078) #7 rag2 (ENSSAUG00010023079) #12 rag1 (ENSSAUG00010023080) #13 ENSSAUG00010023082 furinb (ENSSAUG00010023087) MAN2A2 (ENSSAUG00010023130) unc45a (ENSSAUG00010023330) ENSSAUG00010024072 cib1 (ENSSAUG00010024073) ENSSAUG00010024075 gdpgp1 (ENSSAUG00010024076) RHCG (ENSSAUG00010024078) Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT01050000244857.A.a.b ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Large yellow croaker MODERN SPECIES 492 B4GALNT4 (ENSLCRG00005017498) ABTB2 (ENSLCRG00005017730) #29 BRSK2 (ENSLCRG00005018116) ldha (ENSLCRG00005018166) tsg101a (ENSLCRG00005018190) zgc:123278 (ENSLCRG00005018235) hrasb (ENSLCRG00005018236) LRRC56 (ENSLCRG00005018237) RASSF7 (ENSLCRG00005018238) ENSLCRG00005018239 irf7 (ENSLCRG00005018240) ascl1b (ENSLCRG00005018247) trim44 (ENSLCRG00005018250) #19 PAMR1 (ENSLCRG00005018252) #21 FJX1 (ENSLCRG00005018254) #20 slc1a2b (ENSLCRG00005018256) #22 ENSLCRG00005018273 #23 pdhx (ENSLCRG00005018275) #24 ehf (ENSLCRG00005018298) #26 lrrc4ca (ENSLCRG00005018301) #7 rag2 (ENSLCRG00005018303) #12 rag1 (ENSLCRG00005018305) #13 ENSLCRG00005018307 ENSLCRG00005018314 furinb (ENSLCRG00005018477) MAN2A2 (ENSLCRG00005018641) unc45a (ENSLCRG00005019855) ENSLCRG00005020001 cib1 (ENSLCRG00005020002) ENSLCRG00005020005 gdpgp1 (ENSLCRG00005020009) European seabass MODERN SPECIES 19 ENSDLAG00005008300 #29 ENSDLAG00005008477 tsg101a (ENSDLAG00005026667) ldha (ENSDLAG00005008541) zgc:123278 (ENSDLAG00005027579) HRAS (ENSDLAG00005027285) LRRC56 (ENSDLAG00005008735) RASSF7 (ENSDLAG00005008743) ENSDLAG00005008751 irf7 (ENSDLAG00005008784) ENSDLAG00005026884 LDLRAD3 (ENSDLAG00005032103) #17 trim44 (ENSDLAG00005008841) #19 PAMR1 (ENSDLAG00005008851) #21 FJX1 (ENSDLAG00005008875) #20 slc1a2b (ENSDLAG00005008895) #22 ENSDLAG00005009235 #23 PDHX (ENSDLAG00005009245) #24 ehf (ENSDLAG00005009299) #26 lrrc4ca (ENSDLAG00005034935) #7 rag2 (ENSDLAG00005009319) #12 rag1 (ENSDLAG00005009323) #13 ENSDLAG00005009335 furinb (ENSDLAG00005009410) ENSDLAG00005010444 unc45a (ENSDLAG00005010841) ENSDLAG00005034217 ENSDLAG00005012693 ENSDLAG00005012797 gdpgp1 (ENSDLAG00005012853) RHCG (ENSDLAG00005012880) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b ENSGT00390000000453 Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000157661.e.a #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT01000000214788 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000161101 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT00390000016718 ENSGT00950000182844.b.b.b.a.b ENSGT00390000000453 Climbing perch MODERN SPECIES 19 ENSATEG00000019804 #29 ENSATEG00000019882 ldha (ENSATEG00000019929) tsg101a (ENSATEG00000019953) ENSATEG00000019981 HRAS (ENSATEG00000027858) LRRC56 (ENSATEG00000020014) RASSF7 (ENSATEG00000020029) ENSATEG00000020053 irf7 (ENSATEG00000020093) ENSATEG00000020134 LDLRAD3 (ENSATEG00000020146) #17 trim44 (ENSATEG00000027739) #19 FJX1 (ENSATEG00000020164) #20 PAMR1 (ENSATEG00000020179) #21 slc1a2b (ENSATEG00000020213) #22 ENSATEG00000026505 pdhx (ENSATEG00000020262) #24 ehf (ENSATEG00000020270) #26 ENSATEG00000030064 rag2 (ENSATEG00000020335) #12 rag1 (ENSATEG00000020348) #13 accs (ENSATEG00000020381) furinb (ENSATEG00000020403) ENSATEG00000020448 unc45a (ENSATEG00000020480) ENSATEG00000020545 ENSATEG00000020586 ENSATEG00000027459 gdpgp1 (ENSATEG00000020660) RHCG (ENSATEG00000020677) Siamese fighting fish MODERN SPECIES 17 GALNT8 (ENSBSLG00000023077) ndufa9a (ENSBSLG00000023156) DYRK4 (ENSBSLG00000023365) zgc:123278 (ENSBSLG00000023426) hrasb (ENSBSLG00000023427) LRRC56 (ENSBSLG00000023458) ENSBSLG00000023473 RASSF7 (ENSBSLG00000023484) ENSBSLG00000023493 irf7 (ENSBSLG00000023522) ascl1b (ENSBSLG00000023532) LDLRAD3 (ENSBSLG00000023542) #17 trim44 (ENSBSLG00000023551) #19 FJX1 (ENSBSLG00000023560) #20 PAMR1 (ENSBSLG00000023566) #21 slc1a2b (ENSBSLG00000023635) #22 ENSBSLG00000024094 pdhx (ENSBSLG00000024109) #24 ehf (ENSBSLG00000024290) #26 lrrc4ca (ENSBSLG00000024295) #7 rag2 (ENSBSLG00000024299) #12 rag1 (ENSBSLG00000024416) #13 accs (ENSBSLG00000024460) furinb (ENSBSLG00000024649) MAN2A2 (ENSBSLG00000024702) unc45a (ENSBSLG00000025018) ENSBSLG00000025210 cib1 (ENSBSLG00000025212) gdpgp1 (ENSBSLG00000025215) RHCG (ENSBSLG00000008370) POLG (ENSBSLG00000009663) Zig-zag eel MODERN SPECIES 20 ENSMAMG00000004222 ldha (ENSMAMG00000004268) tsg101a (ENSMAMG00000004295) zgc:123278 (ENSMAMG00000027176) HRAS (ENSMAMG00000025981) ENSMAMG00000004387 RASSF7 (ENSMAMG00000004435) ENSMAMG00000004473 irf7 (ENSMAMG00000004526) ENSMAMG00000004542 LDLRAD3 (ENSMAMG00000004568) #17 ENSMAMG00000025157 trim44 (ENSMAMG00000004596) #19 FJX1 (ENSMAMG00000004613) #20 PAMR1 (ENSMAMG00000004620) #21 slc1a2b (ENSMAMG00000004641) #22 ENSMAMG00000004676 #23 pdhx (ENSMAMG00000004692) #24 ehf (ENSMAMG00000004705) #26 lrrc4ca (ENSMAMG00000004748) #7 rag2 (ENSMAMG00000004764) #12 rag1 (ENSMAMG00000004774) #13 ENSMAMG00000004813 furinb (ENSMAMG00000004861) ENSMAMG00000005010 unc45a (ENSMAMG00000005062) ENSMAMG00000005181 ENSMAMG00000005188 ENSMAMG00000025745 gdpgp1 (ENSMAMG00000005222) RHCG (ENSMAMG00000005228) Carangaria ANCESTRAL SPECIES 6 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b ENSGT00390000016718 Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00940000153903.a.b.b ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000161101 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.I.a.a.a.a.b Tongue sole MODERN SPECIES 16 nat10 (ENSCSEG00000013106) #30 adal (ENSCSEG00000013158) RELN (ENSCSEG00000013178) ENSCSEG00000013236 ENSCSEG00000013239 PLCZ1 (ENSCSEG00000013248) PLEKHA5 (ENSCSEG00000013264) AEBP2 (ENSCSEG00000013311) ENSCSEG00000013326 PDE3A (ENSCSEG00000013333) SLCO1C1 (ENSCSEG00000013375) ldlrad3 (ENSCSEG00000013588) trim44 (ENSCSEG00000013593) #19 FJX1 (ENSCSEG00000013599) #20 ENSCSEG00000013613 #21 slc1a2b (ENSCSEG00000013649) #22 ENSCSEG00000013703 #23 pdhx (ENSCSEG00000013712) #24 ehf (ENSCSEG00000013730) #26 lrrc4ca (ENSCSEG00000013744) #7 rag2 (ENSCSEG00000013749) #12 rag1 (ENSCSEG00000013757) #13 ENSCSEG00000013761 accs (ENSCSEG00000013773) furinb (ENSCSEG00000013800) MAN2A2 (ENSCSEG00000013818) unc45a (ENSCSEG00000013853) ENSCSEG00000013875 ENSCSEG00000013901 cib1 (ENSCSEG00000013996) gdpgp1 (ENSCSEG00000014002) Turbot MODERN SPECIES 1 ENSSMAG00000008855 ldha (ENSSMAG00000008810) tsg101a (ENSSMAG00000008768) zgc:123278 (ENSSMAG00000037018) HRAS (ENSSMAG00000025800) ENSSMAG00000030374 ENSSMAG00000008721 RASSF7 (ENSSMAG00000008690) ENSSMAG00000008622 irf7 (ENSSMAG00000008566) ENSSMAG00000008555 LDLRAD3 (ENSSMAG00000008526) #17 trim44 (ENSSMAG00000008503) #19 FJX1 (ENSSMAG00000008490) #20 PAMR1 (ENSSMAG00000008471) #21 slc1a2b (ENSSMAG00000008421) #22 ENSSMAG00000008404 #23 pdhx (ENSSMAG00000008380) #24 ehf (ENSSMAG00000008372) #26 lrrc4ca (ENSSMAG00000008359) #7 rag2 (ENSSMAG00000008353) #12 rag1 (ENSSMAG00000008338) #13 ENSSMAG00000008311 furinb (ENSSMAG00000008181) ENSSMAG00000008144 unc45a (ENSSMAG00000008101) ENSSMAG00000008079 ENSSMAG00000008064 ENSSMAG00000007887 gdpgp1 (ENSSMAG00000007866) RHCG (ENSSMAG00000007837) Carangaria_A ANCESTRAL SPECIES ENSGT00940000157661.e.a.d #29 ENSGT00940000157462.C.c.b ENSGT00940000153201 ENSGT00940000153903.a.b.a ENSGT00990000206001 ENSGT00940000155653.b ENSGT00390000001545 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.L ENSGT01100000263523.I.a.a.a.a.b Barramundi perch MODERN SPECIES 97 ENSLCAG00010017510 #29 BRSK2 (ENSLCAG00010017488) ldha (ENSLCAG00010017426) tsg101a (ENSLCAG00010017417) zgc:123278 (ENSLCAG00010017412) hrasb (ENSLCAG00010017396) LRRC56 (ENSLCAG00010017389) RASSF7 (ENSLCAG00010017383) ENSLCAG00010017378 irf7 (ENSLCAG00010017370) ascl1b (ENSLCAG00010017367) LDLRAD3 (ENSLCAG00010017364) #17 trim44 (ENSLCAG00010017362) #19 FJX1 (ENSLCAG00010017360) #20 PAMR1 (ENSLCAG00010017356) #21 slc1a2b (ENSLCAG00010017352) #22 ENSLCAG00010017345 #23 pdhx (ENSLCAG00010017342) #24 ehf (ENSLCAG00010017341) #26 lrrc4ca (ENSLCAG00010017337) #7 rag2 (ENSLCAG00010017333) #12 rag1 (ENSLCAG00010017330) #13 ENSLCAG00010017324 furinb (ENSLCAG00010017267) MAN2A2 (ENSLCAG00010017170) unc45a (ENSLCAG00010017130) ENSLCAG00010017114 cib1 (ENSLCAG00010017097) ENSLCAG00010017091 gdpgp1 (ENSLCAG00010017085) RHCG (ENSLCAG00010017006) Seriola ANCESTRAL SPECIES 5 ENSGT00530000063113.A.r ENSGT00940000155057.wb ENSGT00940000153567.a.a.b.a ENSGT00940000158940.b ENSGT00950000182981.b.f.a.c.b ENSGT00390000004852.a.a ENSGT00940000155977.f ENSGT00390000016897.d ENSGT00940000163253.b.c.b.b.e ENSGT00390000013899.a.a ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000175024 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT01100000263523.L ENSGT01100000263523.I.a.a.a.a.b Greater amberjack MODERN SPECIES 82 MAGI2 (ENSSDUG00000016242) gnai1 (ENSSDUG00000016361) CHRM2 (ENSSDUG00000016410) ENSSDUG00000016429 ENSSDUG00000016582 KLHDC10 (ENSSDUG00000016606) ENSSDUG00000016655 ENSSDUG00000016756 ENSSDUG00000016958 tmem263 (ENSSDUG00000017013) ascl1b (ENSSDUG00000017022) LDLRAD3 (ENSSDUG00000017028) #17 trim44 (ENSSDUG00000017037) #19 PAMR1 (ENSSDUG00000017064) #21 FJX1 (ENSSDUG00000017094) #20 slc1a2b (ENSSDUG00000017098) #22 ENSSDUG00000017115 #23 pdhx (ENSSDUG00000017124) #24 ehf (ENSSDUG00000017136) #26 ENSSDUG00000017150 lrrc4ca (ENSSDUG00000017160) #7 rag2 (ENSSDUG00000017162) #12 rag1 (ENSSDUG00000017166) #13 ENSSDUG00000017174 ENSSDUG00000017184 furinb (ENSSDUG00000017215) MAN2A2 (ENSSDUG00000017277) unc45a (ENSSDUG00000017315) cib1 (ENSSDUG00000017376) ENSSDUG00000017392 ENSSDUG00000017415 Yellowtail amberjack MODERN SPECIES 3167 MAGI2 (ENSSLDG00000024584) gnai1 (ENSSLDG00000024666) CHRM2 (ENSSLDG00000024692) ENSSLDG00000024697 ENSSLDG00000024725 KLHDC10 (ENSSLDG00000024742) ENSSLDG00000024761 ENSSLDG00000024811 ENSSLDG00000025099 tmem263 (ENSSLDG00000025114) ascl1b (ENSSLDG00000025115) LDLRAD3 (ENSSLDG00000025120) #17 trim44 (ENSSLDG00000025125) #19 PAMR1 (ENSSLDG00000025133) #21 FJX1 (ENSSLDG00000025150) #20 slc1a2b (ENSSLDG00000025154) #22 ENSSLDG00000025158 #23 pdhx (ENSSLDG00000025160) #24 Pinecone sodierfish MODERN SPECIES 20 BRSK2 (ENSMMDG00005004205) ldha (ENSMMDG00005004133) tsg101a (ENSMMDG00005004097) ENSMMDG00005004074 hrasb (ENSMMDG00005004059) LRRC56 (ENSMMDG00005024549) RASSF7 (ENSMMDG00005024547) ENSMMDG00005024545 ENSMMDG00005024544 irf7 (ENSMMDG00005024543) ascl1b (ENSMMDG00005024542) LDLRAD3 (ENSMMDG00005024540) #17 trim44 (ENSMMDG00005024538) #19 FJX1 (ENSMMDG00005024537) #20 PAMR1 (ENSMMDG00005024536) #21 slc1a2b (ENSMMDG00005024512) #22 ENSMMDG00005024502 pdhx (ENSMMDG00005024499) #24 ehf (ENSMMDG00005024496) #26 lrrc4ca (ENSMMDG00005024495) #7 rag2 (ENSMMDG00005024493) #12 rag1 (ENSMMDG00005024492) #13 ENSMMDG00005024486 furinb (ENSMMDG00005024478) MAN2A2 (ENSMMDG00005024392) unc45a (ENSMMDG00005024192) ENSMMDG00005024180 cib1 (ENSMMDG00005024178) ENSMMDG00005024176 gdpgp1 (ENSMMDG00005024174) RHCG (ENSMMDG00005024169) Cod MODERN SPECIES 22 ENSGMOG00000008115 ENSGMOG00000008111 fanci (ENSGMOG00000008107) ENSGMOG00000008100 RHCG (ENSGMOG00000008094) gdpgp1 (ENSGMOG00000030669) ENSGMOG00000025895 hrasa (ENSGMOG00000010196) ENSGMOG00000032948 ENSGMOG00000033249 ENSGMOG00000028312 ldlrad3 (ENSGMOG00000003875) trim44 (ENSGMOG00000024424) #19 FJX1 (ENSGMOG00000035366) #20 PAMR1 (ENSGMOG00000012777) #21 slc1a2b (ENSGMOG00000007194) #22 ENSGMOG00000007201 pdhx (ENSGMOG00000036174) #24 ehf (ENSGMOG00000014045) #26 lrrc4ca (ENSGMOG00000003380) #7 rag2 (ENSGMOG00000003392) #12 rag1 (ENSGMOG00000003395) #13 accs (ENSGMOG00000003409) furinb (ENSGMOG00000010637) ENSGMOG00000010656 unc45a (ENSGMOG00000010673) ENSGMOG00000010694 ENSGMOG00000010709 ENSGMOG00000005640 uevld (ENSGMOG00000005684) spty2d1 (ENSGMOG00000037148) Protacanthopterygii ANCESTRAL SPECIES 2 ENSGT00940000155653.b ENSGT00390000001545 ENSGT01040000244721 ENSGT00950000182839.B.b.b ENSGT00950000183205.b.a.a ENSGT00940000160931 ENSGT00940000165300 ENSGT00940000160574 #17 ENSGT00440000034605 #19 ENSGT00390000016768 #20 ENSGT00940000154234.a.c #21 ENSGT00940000155379.g.b #22 ENSGT00530000063822.a.a #23 ENSGT01000000214788 ENSGT00940000156046 #24 ENSGT00940000159310 #26 ENSGT00940000157405.c.a #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760 ENSGT00940000157220.b ENSGT01030000234638.b.b.c.a ENSGT00940000159320 ENSGT00940000164520 ENSGT00940000158927 ENSGT00390000016718 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 260 ENSGT00650000093320.a.a.e.b.e.b ENSGT00940000159857.a.b.e ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.a ENSGT00950000182981.b.f.a.c.a.d.b ENSGT00940000161204.e ENSGT00940000155653.b.q ENSGT00390000001545.f ENSGT00950000182839.B.b.b.d ENSGT00950000183205.b.a.a.c ENSGT00940000160931.j ENSGT00940000165300.c ENSGT00940000160574.a #17 ENSGT00440000034605.j #19 ENSGT00390000016768.b #20 ENSGT00940000154234.a.c.h #21 ENSGT00940000155379.g.b.c #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046.i #24 ENSGT00940000159310.d #26 ENSGT00940000157405.c.a.e #7 Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00650000093320.a.a.e.b.e.b ENSGT00940000159857.a.b.e ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.a ENSGT00950000182981.b.f.a.c.a.d.b ENSGT00940000161204.e ENSGT00940000155653.b.q ENSGT00390000001545.f ENSGT00950000182839.B.b.b.d ENSGT00950000183205.b.a.a.c ENSGT00940000160931.j ENSGT00940000165300.c ENSGT00940000160574.a #17 ENSGT00440000034605.j #19 ENSGT00390000016768.b #20 ENSGT00940000154234.a.c.h #21 ENSGT00940000155379.g.b.c #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046.i #24 ENSGT00940000159310.d #26 ENSGT00940000157405.c.a.e #7 ENSGT00940000164760.f ENSGT00940000157220.b.h ENSGT01030000234638.b.b.c.a.f ENSGT00940000159320 ENSGT00940000158927.f ENSGT00390000016718 ENSGT00940000160201.e ENSGT00510000048252.s ENSGT00940000155628.cb.b.b ENSGT00390000006548.a.b.a.a ENSGT00990000210634 Oncorhynchus ANCESTRAL SPECIES 2 ENSGT00650000093320.a.a.e.b.e.b ENSGT00940000159857.a.b.e ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.a ENSGT00950000182981.b.f.a.c.a.d.b.a ENSGT00940000161204.e ENSGT00940000155653.b.q ENSGT00390000001545.f ENSGT00950000182839.B.b.b.d ENSGT00950000183205.b.a.a.c ENSGT00940000160931.j ENSGT00940000165300.c ENSGT00940000160574.a #17 ENSGT00440000034605.j #19 ENSGT00390000016768.b #20 ENSGT00940000154234.a.c.h #21 ENSGT00940000155379.g.b.c #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046.i #24 ENSGT00940000159310.d #26 ENSGT00940000157405.c.a.e #7 ENSGT00940000164760.f ENSGT00940000157220.b.h ENSGT01030000234638.b.b.c.a.f ENSGT00940000159320 ENSGT00940000158927.f ENSGT00390000016718 ENSGT00940000160201.e ENSGT00510000048252.s ENSGT00940000155628.cb.b.b ENSGT00390000006548.a.b.a.a ENSGT00940000164795 Oncorhynchus_a ANCESTRAL SPECIES 1 ENSGT00650000093320.a.a.e.b.e.b ENSGT00940000159857.a.b.e ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.a ENSGT00950000182981.b.f.a.c.a.d.b.a ENSGT00940000161204.e ENSGT00940000155653.b.q ENSGT00390000001545.f ENSGT00950000182839.B.b.b.d ENSGT00950000183205.b.a.a.c ENSGT00940000160931.j ENSGT00940000165300.c ENSGT00940000160574.a #17 ENSGT00440000034605.j #19 ENSGT00390000016768.b #20 ENSGT00940000154234.a.c.h #21 ENSGT00940000155379.g.b.c #22 ENSGT00530000063822.a.a #23 ENSGT00940000156046.i #24 ENSGT00940000159310.d #26 ENSGT00940000157405.c.a.e #7 ENSGT00940000164760.f ENSGT00940000157220.b.h ENSGT01030000234638.b.b.c.a.f ENSGT00940000159320 ENSGT00940000158927.f ENSGT00390000016718 ENSGT00940000160201.e ENSGT00510000048252.s ENSGT00940000155628.cb.b.b ENSGT00390000006548.a.b.a.a ENSGT00940000164795 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2903 erc1a (ENSOTSG00005020006) FBXL14 (ENSOTSG00005019973) ENSOTSG00005019970 ahcyl2b (ENSOTSG00005019843) LRRN2 (ENSOTSG00005019842) hrasb (ENSOTSG00005019841) RASSF7 (ENSOTSG00005019840) ENSOTSG00005019838 ENSOTSG00005019837 irf7 (ENSOTSG00005019830) ascl1b (ENSOTSG00005019828) LDLRAD3 (ENSOTSG00005019826) #17 trim44 (ENSOTSG00005019825) #19 FJX1 (ENSOTSG00005019824) #20 PAMR1 (ENSOTSG00005019823) #21 slc1a2b (ENSOTSG00005019822) #22 ENSOTSG00005019821 #23 pdhx (ENSOTSG00005019656) #24 ehf (ENSOTSG00005019653) #26 lrrc4ca (ENSOTSG00005033921) #7 ENSOTSG00005033920 furinb (ENSOTSG00005033429) MAN2A2 (ENSOTSG00005032783) unc45a (ENSOTSG00005030679) cib1 (ENSOTSG00005030676) agbl2 (ENSOTSG00005030611) PCLAF (ENSOTSG00005030604) ENSOTSG00005030602 ENSOTSG00005030593 zgc:193812 (ENSOTSG00005030591) nedd1 (ENSOTSG00005030590) Chinook salmon MODERN SPECIES 30 FBXL14 (ENSOTSG00005044390) ENSOTSG00005044391 ahcyl2b (ENSOTSG00005044393) LRRN2 (ENSOTSG00005044394) hrasb (ENSOTSG00005044395) RASSF7 (ENSOTSG00005044397) ENSOTSG00005044399 ENSOTSG00005044400 irf7 (ENSOTSG00005044401) ascl1b (ENSOTSG00005044402) LDLRAD3 (ENSOTSG00005044426) #17 trim44 (ENSOTSG00005044428) #19 ENSOTSG00005044429 FJX1 (ENSOTSG00005044430) #20 PAMR1 (ENSOTSG00005044431) #21 slc1a2b (ENSOTSG00005044432) #22 ENSOTSG00005044438 #23 pdhx (ENSOTSG00005044441) #24 ehf (ENSOTSG00005044442) #26 lrrc4ca (ENSOTSG00005006918) #7 furinb (ENSOTSG00005006982) MAN2A2 (ENSOTSG00005007859) unc45a (ENSOTSG00005013155) cib1 (ENSOTSG00005014359) agbl2 (ENSOTSG00005014361) PCLAF (ENSOTSG00005014363) ENSOTSG00005014366 zgc:114188 (ENSOTSG00005014374) zgc:193812 (ENSOTSG00005014380) nedd1 (ENSOTSG00005014381) si:ch211-59o9.10 (ENSOTSG00005014383) Coho salmon MODERN SPECIES 24 FBXL14 (ENSOKIG00005002192) ENSOKIG00005002206 ENSOKIG00005002215 ENSOKIG00005002228 LRRN2 (ENSOKIG00005002250) HRAS (ENSOKIG00005002270) ENSOKIG00005002289 RASSF7 (ENSOKIG00005002311) ENSOKIG00005002333 irf7 (ENSOKIG00005002345) ascl1b (ENSOKIG00005002354) trim44 (ENSOKIG00005002381) #19 FJX1 (ENSOKIG00005002401) #20 PAMR1 (ENSOKIG00005002410) #21 ENSOKIG00005002422 slc1a2b (ENSOKIG00005002432) #22 ENSOKIG00005002460 #23 pdhx (ENSOKIG00005002508) #24 EHF (ENSOKIG00005002628) #26 lrrc4ca (ENSOKIG00005002640) #7 LRRC4C (ENSOKIG00005002645) #7 ENSOKIG00005002650 ENSOKIG00005002653 ENSOKIG00005002659 ENSOKIG00005002665 ENSOKIG00005002670 furinb (ENSOKIG00005002817) MAN2A2 (ENSOKIG00005003659) unc45a (ENSOKIG00005003861) CIB1 (ENSOKIG00005004133) gdpgp1 (ENSOKIG00005004151) Rainbow trout MODERN SPECIES ENSOMYG00000035292 ENSOMYG00000035312 ENSOMYG00000035351 HRAS (ENSOMYG00000035398) ENSOMYG00000076612 ENSOMYG00000035417 RASSF7 (ENSOMYG00000035436) ENSOMYG00000035456 irf7 (ENSOMYG00000035476) ENSOMYG00000035488 trim44 (ENSOMYG00000035527) #19 FJX1 (ENSOMYG00000035547) #20 PAMR1 (ENSOMYG00000035588) #21 ENSOMYG00000068452 ENSOMYG00000071187 slc1a2b (ENSOMYG00000035644) #22 ENSOMYG00000035707 #23 pdhx (ENSOMYG00000035782) #24 ENSOMYG00000052077 EHF (ENSOMYG00000036111) #26 ENSOMYG00000036128 #7 ENSOMYG00000046217 ENSOMYG00000036226 ENSOMYG00000073908 ENSOMYG00000067795 furinb (ENSOMYG00000036324) ENSOMYG00000036694 unc45a (ENSOMYG00000037612) kip1 (ENSOMYG00000038118) gdpgp1 (ENSOMYG00000069685) ENSOMYG00000059496 Salmo ANCESTRAL SPECIES 45 ENSGT00940000155474.p.a.e ENSGT00650000093320.a.a.e.b.e.b ENSGT00940000159857.a.b.e ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.a ENSGT00950000182981.b.f.a.c.a.d.b ENSGT00940000161204.e ENSGT00940000155653.b.q ENSGT00950000182839.B.b.b.d ENSGT00950000183205.b.a.a.c ENSGT00940000160931.j ENSGT00940000165300.c ENSGT00940000160574.a #17 ENSGT00440000034605.j #19 ENSGT00390000016768.b #20 ENSGT00940000154234.a.c.h #21 ENSGT00940000155379.g.b.c #22 ENSGT00530000063822.a.a.n #23 ENSGT00940000156046.i #24 ENSGT00940000159310.d #26 ENSGT00940000157405.c.a.e #7 ENSGT00940000157220.b.h ENSGT01030000234638.b.b.c.a.f ENSGT00940000159320 ENSGT00940000158927.f ENSGT00390000016718 ENSGT00940000160201.e ENSGT00510000048252.s ENSGT00940000155628.cb.b.b ENSGT00390000006548.a.b.a.a ENSGT00990000210634 ENSGT00940000164795 Atlantic salmon MODERN SPECIES 7 rad52 (ENSSSAG00000077393) ENSSSAG00000077381 ENSSSAG00000084430 erc1 (ENSSSAG00000076915) ENSSSAG00000076398 ENSSSAG00000112447 HRAS (ENSSSAG00000076388) RASSF7 (ENSSSAG00000083063) ENSSSAG00000076379 irf7 (ENSSSAG00000076373) ENSSSAG00000117824 LDLRAD3 (ENSSSAG00000076362) #17 trim44 (ENSSSAG00000076355) #19 FJX1 (ENSSSAG00000102720) #20 PAMR1 (ENSSSAG00000076344) #21 slc1a2b (ENSSSAG00000111366) #22 ENSSSAG00000090776 #23 pdhx (ENSSSAG00000076109) #24 EHF (ENSSSAG00000105123) #26 ENSSSAG00000083231 #7 ENSSSAG00000120342 ENSSSAG00000091242 furinb (ENSSSAG00000075581) ENSSSAG00000121714 ENSSSAG00000089007 ENSSSAG00000070998 unc45a (ENSSSAG00000068990) ENSSSAG00000068915 gdpgp1 (ENSSSAG00000068912) ENSSSAG00000068893 PAF (ENSSSAG00000068886) River trout MODERN SPECIES 8 ENSSTUG00000034878 erc1a (ENSSTUG00000035073) FBXL14 (ENSSTUG00000042103) ENSSTUG00000042110 ahcyl2b (ENSSTUG00000042178) LRRN2 (ENSSTUG00000042734) HRAS (ENSSTUG00000042755) RASSF7 (ENSSTUG00000042790) ENSSTUG00000042815 irf7 (ENSSTUG00000042851) ascl1b (ENSSTUG00000042878) LDLRAD3 (ENSSTUG00000042898) #17 trim44 (ENSSTUG00000042916) #19 FJX1 (ENSSTUG00000042947) #20 PAMR1 (ENSSTUG00000042962) #21 slc1a2b (ENSSTUG00000043026) #22 ENSSTUG00000043316 #23 pdhx (ENSSTUG00000043343) #24 ehf (ENSSTUG00000043526) #26 ENSSTUG00000043566 lrrc4ca (ENSSTUG00000043580) #7 furinb (ENSSTUG00000043620) MAN2A2 (ENSSTUG00000043945) unc45a (ENSSTUG00000044471) cib1 (ENSSTUG00000046741) gdpgp1 (ENSSTUG00000046752) agbl2 (ENSSTUG00000046762) zgc:114188 (ENSSTUG00000046930) PCLAF (ENSSTUG00000046947) ENSSTUG00000046970 ENSSTUG00000047449 Huchen MODERN SPECIES 546 PAMR1 (ENSHHUG00000001178) #21 slc1a2b (ENSHHUG00000001186) #22 ENSHHUG00000001458 #23 pdhx (ENSHHUG00000001470) #24 ehf (ENSHHUG00000001478) #26 Salmoninae ANCESTRAL SPECIES 120 ENSGT00940000159857.a.b.f ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.b ENSGT00950000182981.b.f.a.c.a.d.a ENSGT00940000161204.f ENSGT00940000155653.b.r ENSGT00390000001545.e ENSGT01040000244721 ENSGT00950000182839.B.b.b.c ENSGT00950000183205.b.a.a.d ENSGT00940000160931.i ENSGT00940000165300.d ENSGT00940000160574.b #17 ENSGT00440000034605.i #19 ENSGT00390000016768.a #20 ENSGT00940000154234.a.c.g #21 ENSGT00940000155379.g.b.d #22 ENSGT01000000214788 ENSGT00940000156046.j #24 ENSGT00940000159310.c #26 ENSGT00940000157405.c.a.f #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760.e ENSGT00940000157220.b.g ENSGT01030000234638.b.b.c.a.e ENSGT00940000164520 ENSGT00940000158927.e ENSGT00940000160201.f ENSGT00940000153899.b.b ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b Salmoninae_a ANCESTRAL SPECIES 13 ENSGT00940000159857.a.b.f.b ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.b ENSGT00950000182981.b.f.a.c.a.d.a ENSGT00940000161204.f ENSGT00940000155653.b.r ENSGT00390000001545.e ENSGT01040000244721 ENSGT00950000182839.B.b.b.c ENSGT00950000183205.b.a.a.d ENSGT00940000160931.i ENSGT00940000165300.d ENSGT00940000160574.b #17 ENSGT00440000034605.i #19 ENSGT00390000016768.a #20 ENSGT00940000154234.a.c.g #21 ENSGT00940000155379.g.b.d #22 ENSGT01000000214788 ENSGT00940000156046.j #24 ENSGT00940000159310.c #26 ENSGT00940000157405.c.a.f #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760.e ENSGT00940000157220.b.g ENSGT01030000234638.b.b.c.a.e ENSGT00940000164520 ENSGT00940000158927.e ENSGT00980000198710.e.b.a.a.a.b ENSGT00980000198710.e.b.a.a.a.a ENSGT00940000160201.f Salmo ANCESTRAL SPECIES 9 ENSGT00650000093320.a.a.e.b.e.a ENSGT00940000159857.a.b.f.b ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.b ENSGT00950000182981.b.f.a.c.a.d.a ENSGT00940000161204.f ENSGT00940000155653.b.r ENSGT00390000001545.e ENSGT01040000244721 ENSGT00950000182839.B.b.b.c ENSGT00950000183205.b.a.a.d ENSGT00940000160931.i ENSGT00940000165300.d.b ENSGT00940000160574.b #17 ENSGT00390000016768.a #20 ENSGT00940000154234.a.c.g #21 ENSGT00940000155379.g.b.d #22 ENSGT00530000063822.a.a.m #23 ENSGT00940000156046.j #24 ENSGT00940000159310.c #26 ENSGT00940000157405.c.a.f #7 ENSGT00940000175068 ENSGT00390000012559.f #12 ENSGT00390000008679 #13 ENSGT00940000164760.e ENSGT00940000157220.b.g ENSGT01030000234638.b.b.c.a.e ENSGT00940000164520 ENSGT00940000158927.e ENSGT00980000198710.e.b.a.a.a.b ENSGT00980000198710.e.b.a.a.a.a ENSGT00940000153899.b.b Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 1 ENSSSAG00000102682 ENSSSAG00000098546 ENSSSAG00000075315 ENSSSAG00000075665 ENSSSAG00000093694 rash (ENSSSAG00000107509) ENSSSAG00000120331 RASSF7 (ENSSSAG00000111432) ENSSSAG00000090524 ENSSSAG00000094000 irf7 (ENSSSAG00000081805) ENSSSAG00000076367 ldlrad3 (ENSSSAG00000098065) trim44 (ENSSSAG00000003946) #19 PAMR1 (ENSSSAG00000003964) #21 slc1a2b (ENSSSAG00000105223) #22 ENSSSAG00000084203 #23 pdhx (ENSSSAG00000099441) #24 EHF (ENSSSAG00000082470) #26 ENSSSAG00000094766 #7 ENSSSAG00000085965 ENSSSAG00000100534 ENSSSAG00000122177 ENSSSAG00000102153 ENSSSAG00000009552 ENSSSAG00000091065 ENSSSAG00000009326 ENSSSAG00000009299 ENSSSAG00000111181 ENSSSAG00000108619 ENSSSAG00000113170 Atlantic salmon MODERN SPECIES 8 ENSSSAG00000075666 HRAS (ENSSSAG00000043492) ENSSSAG00000075669 ENSSSAG00000092579 RASSF7 (ENSSSAG00000075670) ENSSSAG00000086733 irf7 (ENSSSAG00000075674) ENSSSAG00000003931 ENSSSAG00000109370 LDLRAD3 (ENSSSAG00000087421) #17 ENSSSAG00000110996 FJX1 (ENSSSAG00000106972) #20 ENSSSAG00000085834 PAMR1 (ENSSSAG00000111424) #21 ENSSSAG00000094005 slc1a2b (ENSSSAG00000004013) #22 ENSSSAG00000119579 #23 pdhx (ENSSSAG00000004450) #24 EHF (ENSSSAG00000004525) #26 River trout MODERN SPECIES 37 ENSSTUG00000002137 erc1a (ENSSTUG00000002199) FBXL14 (ENSSTUG00000003180) ENSSTUG00000003184 ahcyl2b (ENSSTUG00000003195) LRRN2 (ENSSTUG00000003217) hrasb (ENSSTUG00000003227) LRRC56 (ENSSTUG00000003242) RASSF7 (ENSSTUG00000003300) ENSSTUG00000003325 irf7 (ENSSTUG00000003347) ascl1b (ENSSTUG00000003401) LDLRAD3 (ENSSTUG00000003407) #17 FJX1 (ENSSTUG00000003413) #20 PAMR1 (ENSSTUG00000003419) #21 slc1a2b (ENSSTUG00000003529) #22 ENSSTUG00000005258 ENSSTUG00000005262 pdhx (ENSSTUG00000005272) #24 ehf (ENSSTUG00000005338) #26 lrrc4ca (ENSSTUG00000005345) #7 ENSSTUG00000005346 ENSSTUG00000005350 rag2 (ENSSTUG00000005365) #12 rag1 (ENSSTUG00000005374) #13 ENSSTUG00000005394 furinb (ENSSTUG00000005653) MAN2A2 (ENSSTUG00000007460) ENSSTUG00000010299 cib1 (ENSSTUG00000010319) ENSSTUG00000010356 Oncorhynchus ANCESTRAL SPECIES 10 ENSGT00650000093320.a.a.e.b.e.a ENSGT00940000159857.a.b.f.b ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.b ENSGT00950000182981.b.f.a.c.a.d.a ENSGT00940000161204.f ENSGT00940000155653.b.r ENSGT00390000001545.e ENSGT00950000182839.B.b.b.c ENSGT00950000183205.b.a.a.d ENSGT00940000160931.i ENSGT00940000165300.d ENSGT00940000160574.b #17 ENSGT00440000034605.i #19 ENSGT00390000016768.a #20 ENSGT00940000154234.a.c.g #21 ENSGT00940000155379.g.b.d #22 ENSGT01000000214788 ENSGT00940000156046.j #24 ENSGT00940000159310.c #26 ENSGT00940000157405.c.a.f #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760.e ENSGT00940000157220.b.g ENSGT01030000234638.b.b.c.a.e ENSGT00940000164520 ENSGT00940000158927.e ENSGT00980000198710.e.b.a.a.a.b ENSGT00980000198710.e.b.a.a.a.a ENSGT00940000160201.f Oncorhynchus_a ANCESTRAL SPECIES 5 ENSGT00650000093320.a.a.e.b.e.a ENSGT00940000159857.a.b.f.b ENSGT01100000263516.a.b.b.b.b.a.a.b.b.a.a.a.a.b ENSGT00950000182981.b.f.a.c.a.d.a ENSGT00940000161204.f ENSGT00940000155653.b.r ENSGT00390000001545.e ENSGT00950000182839.B.b.b.c ENSGT00950000183205.b.a.a.d ENSGT00940000160931.i ENSGT00940000165300.d ENSGT00940000160574.b #17 ENSGT00440000034605.i #19 ENSGT00390000016768.a #20 ENSGT00940000154234.a.c.g #21 ENSGT00940000155379.g.b.d #22 ENSGT01000000214788 ENSGT00940000156046.j #24 ENSGT00940000159310.c #26 ENSGT00940000157405.c.a.f #7 ENSGT00940000175068 ENSGT00390000012559 #12 ENSGT00390000008679 #13 ENSGT00940000164760.e ENSGT00940000157220.b.g ENSGT01030000234638.b.b.c.a.e ENSGT00940000164520 ENSGT00940000158927.e ENSGT00940000160201.f ENSGT00940000153899.b.b ENSGT01100000263516.a.b.b.b.b.a.a.a.a.a.b.c.b Chinook salmon MODERN SPECIES 10 erc1a (ENSOTSG00005042414) FBXL14 (ENSOTSG00005042965) ENSOTSG00005042966 ahcyl2b (ENSOTSG00005042969) LRRN2 (ENSOTSG00005043036) hrasb (ENSOTSG00005043037) LRRC56 (ENSOTSG00005043038) RASSF7 (ENSOTSG00005043039) ENSOTSG00005043041 irf7 (ENSOTSG00005043042) ascl1b (ENSOTSG00005043044) LDLRAD3 (ENSOTSG00005043047) #17 trim44 (ENSOTSG00005043049) #19 FJX1 (ENSOTSG00005043055) #20 PAMR1 (ENSOTSG00005043057) #21 slc1a2b (ENSOTSG00005043063) #22 ENSOTSG00005043380 pdhx (ENSOTSG00005043381) #24 ehf (ENSOTSG00005043385) #26 lrrc4ca (ENSOTSG00005043387) #7 ENSOTSG00005043389 rag2 (ENSOTSG00005043390) #12 rag1 (ENSOTSG00005043391) #13 ENSOTSG00005043395 furinb (ENSOTSG00005043429) MAN2A2 (ENSOTSG00005043561) ENSOTSG00005044271 cib1 (ENSOTSG00005044272) ENSOTSG00005044274 ENSOTSG00005034370 tmem17 (ENSOTSG00005034383) Coho salmon MODERN SPECIES 14 erc1a (ENSOKIG00005037252) FBXL14 (ENSOKIG00005037980) ENSOKIG00005037987 ENSOKIG00005038006 LRRN2 (ENSOKIG00005038038) hrasb (ENSOKIG00005038046) LRRC56 (ENSOKIG00005038069) RASSF7 (ENSOKIG00005038093) ENSOKIG00005038119 irf7 (ENSOKIG00005038143) ENSOKIG00005038201 LDLRAD3 (ENSOKIG00005038215) #17 trim44 (ENSOKIG00005038226) #19 FJX1 (ENSOKIG00005038244) #20 PAMR1 (ENSOKIG00005038255) #21 slc1a2b (ENSOKIG00005038293) #22 ENSOKIG00005038569 pdhx (ENSOKIG00005038583) #24 ehf (ENSOKIG00005038611) #26 lrrc4ca (ENSOKIG00005038626) #7 ENSOKIG00005038630 rag2 (ENSOKIG00005038641) #12 rag1 (ENSOKIG00005038646) #13 ENSOKIG00005038672 furinb (ENSOKIG00005039058) ENSOKIG00005039915 cib1 (ENSOKIG00005039942) ENSOKIG00005040025 ENSOKIG00005040039 ENSOKIG00005040065 ENSOKIG00005040076 Rainbow trout MODERN SPECIES 11 HRAS (ENSOMYG00000001007) ENSOMYG00000066059 LRRC56 (ENSOMYG00000001016) ENSOMYG00000075885 RASSF7 (ENSOMYG00000001020) ENSOMYG00000001037 ENSOMYG00000060459 irf7 (ENSOMYG00000001046) ENSOMYG00000001058 ldlrad3 (ENSOMYG00000001068) ENSOMYG00000022802 ENSOMYG00000076529 trim44 (ENSOMYG00000001084) #19 FJX1 (ENSOMYG00000001104) #20 PAMR1 (ENSOMYG00000001139) #21 slc1a2b (ENSOMYG00000001529) #22 ENSOMYG00000001750 pdhx (ENSOMYG00000001773) #24 ehf (ENSOMYG00000001792) #26 ENSOMYG00000077396 ENSOMYG00000041512 ENSOMYG00000052310 lrrc4ca (ENSOMYG00000001817) #7 ENSOMYG00000001871 rag2 (ENSOMYG00000001880) #12 rag1 (ENSOMYG00000001899) #13 ENSOMYG00000002038 furinb (ENSOMYG00000002321) ENSOMYG00000048392 ENSOMYG00000002412 ENSOMYG00000002431 Huchen MODERN SPECIES 2836 FJX1 (ENSHHUG00000017425) #20 PAMR1 (ENSHHUG00000017406) #21 slc1a2b (ENSHHUG00000016099) #22 xiap (ENSHHUG00000016077) ENSHHUG00000016074 psmd10 (ENSHHUG00000016069) nxt2 (ENSHHUG00000016005) ENSHHUG00000016000 nek12 (ENSHHUG00000015997) DRD1 (ENSHHUG00000015986) ENSHHUG00000015982 ENSHHUG00000015892 Northern pike MODERN SPECIES 18 ENSELUG00000004903 ENSELUG00000004863 RFX7 (ENSELUG00000004839) ENSELUG00000004818 rsl24d1 (ENSELUG00000004796) ENSELUG00000004749 HRAS (ENSELUG00000004712) LRRC56 (ENSELUG00000004702) RASSF7 (ENSELUG00000004684) ENSELUG00000004640 irf7 (ENSELUG00000004592) ascl1b (ENSELUG00000004573) LDLRAD3 (ENSELUG00000004564) #17 trim44 (ENSELUG00000004539) #19 PAMR1 (ENSELUG00000004507) #21 slc1a2b (ENSELUG00000004468) #22 ENSELUG00000025015 ENSELUG00000004414 pdhx (ENSELUG00000004391) #24 ehf (ENSELUG00000004338) #26 ENSELUG00000031373 ENSELUG00000033082 rag2 (ENSELUG00000004287) #12 rag1 (ENSELUG00000004272) #13 ENSELUG00000032137 ENSELUG00000004249 furinb (ENSELUG00000001182) MAN2A2 (ENSELUG00000004109) unc45a (ENSELUG00000004046) ENSELUG00000003996 cib1 (ENSELUG00000001381) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155379.h #22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155379.h #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000161700 ENSGT00940000153561.b.a.b.a.a ENSGT00950000182973.b.b.c ENSGT00940000161770 ENSGT00940000160439 ENSGT00940000160261.g ENSGT00940000160092.B ENSGT00390000004520 ENSGT00930000151196.b ENSGT00390000017397 ENSGT00940000158989 ENSGT00940000167404 ENSGT00390000001927.b ENSGT01050000244900.a.b.g ENSGT00390000007725.B.c ENSGT00940000155379.h #22 ENSGT01050000244900.a.b.f.a ENSGT00940000166365 ENSGT00940000164717.b ENSGT00940000161346 ENSGT00390000009532.A.d.b ENSGT00530000063686.b ENSGT00390000010721.b ENSGT00390000007311 ENSGT00470000042293.a.b.a.a ENSGT00940000166739 ENSGT00390000017606.a.a ENSGT01070000253895 ENSGT01050000244893.c.a.b.i ENSGT00940000167987 ENSGT01030000234599.a.a Acanthomorphata ANCESTRAL SPECIES 2 ENSGT00940000153561.b.a.b.a.a ENSGT00950000182973.b.b.c ENSGT00940000161770 ENSGT00940000160439 ENSGT00940000160261.g ENSGT00940000160092.B ENSGT00390000004520 ENSGT00930000151196.b ENSGT00390000017397 ENSGT00940000158989 ENSGT00940000167404 ENSGT00390000001927.b ENSGT01050000244900.a.b.f.a ENSGT00390000007725.B.c ENSGT00940000166365 ENSGT00940000155379.h #22 ENSGT00940000164717.b ENSGT00940000161346 ENSGT00390000009532.A.d.b ENSGT00530000063686.b ENSGT00390000010721.b ENSGT00390000007311 ENSGT00470000042293.a.b.a.a ENSGT00940000166739 ENSGT00390000017606.a.a ENSGT01050000244893.c.a.b.i ENSGT01030000234599.a.a ENSGT00940000156772.b.c.b.a ENSGT00390000002667 ENSGT00940000160265.h ENSGT00940000165011.b Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155379.h #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000155379.h #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000155379.h #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000155379.h #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000155379.h #22 Oryzias ANCESTRAL SPECIES ENSGT00940000155379.h #22 Oryzias_b ANCESTRAL SPECIES 11 ENSGT00940000161700 ENSGT00940000153561.b.a.b.a.a ENSGT00950000182973.b.b.c ENSGT00940000161770 ENSGT00940000160439 ENSGT00940000160261.g ENSGT00940000160092.B ENSGT00390000004520 ENSGT00930000151196.b ENSGT00390000017397 ENSGT00940000158989 ENSGT00940000167404 ENSGT00390000001927.b ENSGT01050000244900.a.b.f.a ENSGT00390000007725.B.c ENSGT00940000155379.h #22 ENSGT00940000164717.b ENSGT00940000161346 ENSGT00390000009532.A.d.b ENSGT00530000063686.b ENSGT00390000010721.b ENSGT00390000007311 ENSGT00470000042293.a.b.a.a ENSGT00940000166739 ENSGT00390000017606.a.a ENSGT01070000253855 ENSGT01050000244893.c.a.b.i ENSGT01030000234599.a.a.u.b ENSGT00390000002667 ENSGT00940000160265.h ENSGT00940000165011.b Javanese ricefish MODERN SPECIES 22 ppp1caa (ENSOJAG00000015649) kmt5c (ENSOJAG00000016116) ENSOJAG00000016275 SYT3 (ENSOJAG00000016333) med25 (ENSOJAG00000000087) LRRC4B (ENSOJAG00000000121) mybpc2a (ENSOJAG00000000296) emc10 (ENSOJAG00000000403) zgc:195001 (ENSOJAG00000000409) ENSOJAG00000000415 tbc1d17 (ENSOJAG00000000460) ccndx (ENSOJAG00000000591) nucb1 (ENSOJAG00000000596) PPFIA3 (ENSOJAG00000000688) ENSOJAG00000000889 ENSOJAG00000000900 #22 hsd17b14 (ENSOJAG00000000924) ENSOJAG00000000938 bcat2 (ENSOJAG00000000946) ifi35 (ENSOJAG00000000969) rpl27 (ENSOJAG00000000982) RUNDC1 (ENSOJAG00000000996) grna (ENSOJAG00000001015) ENSOJAG00000001039 slc25a39 (ENSOJAG00000001053) rpl3 (ENSOJAG00000001079) ENSOJAG00000001092 CACNG2 (ENSOJAG00000001102) ENSOJAG00000001113 ENSOJAG00000001134 SSTR5 (ENSOJAG00000001139) Indian medaka MODERN SPECIES 9 ENSOMEG00000018667 ENSOMEG00000018606 SYT3 (ENSOMEG00000018514) med25 (ENSOMEG00000018476) LRRC4B (ENSOMEG00000018451) mybpc2a (ENSOMEG00000018391) emc10 (ENSOMEG00000018224) zgc:195001 (ENSOMEG00000018171) ENSOMEG00000018160 tbc1d17 (ENSOMEG00000018129) ccndx (ENSOMEG00000018073) nucb1 (ENSOMEG00000018053) ENSOMEG00000018031 ENSOMEG00000018015 ENSOMEG00000017984 ENSOMEG00000017969 #22 ENSOMEG00000017954 hsd17b14 (ENSOMEG00000000459) bcat2 (ENSOMEG00000017898) ifi35 (ENSOMEG00000017839) rpl27 (ENSOMEG00000017790) RUNDC1 (ENSOMEG00000017768) grna (ENSOMEG00000017735) slc25a39 (ENSOMEG00000017617) rpl3 (ENSOMEG00000017560) ENSOMEG00000017530 CACNG2 (ENSOMEG00000017493) ENSOMEG00000017466 ENSOMEG00000017416 ENSOMEG00000017397 eif3d (ENSOMEG00000017372) Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000155379.h #22 Eupercaria ANCESTRAL SPECIES ENSGT00940000155379.h #22 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000155379.h #22 Tetraodon MODERN SPECIES 18 ENSTNIG00000001206 ENSTNIG00000019537 ENSTNIG00000019521 RAPGEFL1 (ENSTNIG00000003207) casc3 (ENSTNIG00000003208) ENSTNIG00000019576 ENSTNIG00000003209 emc10 (ENSTNIG00000006157) zgc:195001 (ENSTNIG00000000236) ENSTNIG00000006158 tbc1d17 (ENSTNIG00000006159) ccndx (ENSTNIG00000001588) nucb1 (ENSTNIG00000006160) PPFIA3 (ENSTNIG00000006161) NTF4 (ENSTNIG00000006162) ENSTNIG00000002361 #22 hsd17b14 (ENSTNIG00000002364) ENSTNIG00000003874 ifi35 (ENSTNIG00000003875) sco1 (ENSTNIG00000003876) ENSTNIG00000003877 GAS7 (ENSTNIG00000011253) rcvrna (ENSTNIG00000011254) ENSTNIG00000011255 ENSTNIG00000011256 ENSTNIG00000011257 radil2a (ENSTNIG00000011258) grap2a (ENSTNIG00000011259) ENSTNIG00000011260 ENSTNIG00000011261 ENSTNIG00000011262 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000155379.h #22 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000155379.h #22 Perciformes ANCESTRAL SPECIES ENSGT00940000155379.h #22 Cottioidei ANCESTRAL SPECIES ENSGT00940000155379.h #22 Stickleback MODERN SPECIES 10 ENSGACG00000014777 ENSGACG00000014776 kpnb1 (ENSGACG00000014765) ENSGACG00000014763 btr30 (ENSGACG00000014751) ENSGACG00000014740 ENSGACG00000014738 med15 (ENSGACG00000014731) thoc6 (ENSGACG00000014717) ENSGACG00000014714 stx1b (ENSGACG00000014700) ENSGACG00000014698 ENSGACG00000014697 cyt1 (ENSGACG00000014692) ENSGACG00000014689 ENSGACG00000014685 #22 ENSGACG00000014683 hsd17b14 (ENSGACG00000014680) bcat2 (ENSGACG00000014660) ifi35 (ENSGACG00000014656) rpl27 (ENSGACG00000014635) RUNDC1 (ENSGACG00000014634) grna (ENSGACG00000014616) slc25a39 (ENSGACG00000014603) rpl3 (ENSGACG00000014559) cacng2a (ENSGACG00000014558) ENSGACG00000014557 ENSGACG00000014556 ENSGACG00000014553 ENSGACG00000014547 eif3d (ENSGACG00000014538) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00940000155379.h #22 Carangaria ANCESTRAL SPECIES ENSGT00940000155379.h #22 Carangaria_A ANCESTRAL SPECIES ENSGT00940000155379.h #22 Seriola ANCESTRAL SPECIES ENSGT00940000155379.h #22 Yellowtail amberjack DUPLICATION Yellowtail amberjack MODERN SPECIES 2918 crlf3 (ENSSLDG00000016370) suz12a (ENSSLDG00000016341) ENSSLDG00000016323 tsen54 (ENSSLDG00000016303) ENSSLDG00000016272 ENSSLDG00000016242 ENSSLDG00000016196 ENSSLDG00000016175 ENSSLDG00000016151 dhrs7ca (ENSSLDG00000016136) ppan (ENSSLDG00000016106) p2ry11 (ENSSLDG00000016092) eif3g (ENSSLDG00000016076) dnmt1 (ENSSLDG00000014902) s1pr2 (ENSSLDG00000014695) ENSSLDG00000014682 #22 ENSSLDG00000014669 ENSSLDG00000014656 ENSSLDG00000014633 ENSSLDG00000014609 ENSSLDG00000014595 CDC37 (ENSSLDG00000014585) TYK2 (ENSSLDG00000014535) raver1 (ENSSLDG00000014505) PDE4A (ENSSLDG00000014021) prkcsh (ENSSLDG00000013848) elavl3 (ENSSLDG00000013769) DOCK6 (ENSSLDG00000013575) kank2 (ENSSLDG00000013495) ENSSLDG00000013479 HBE1 (ENSSLDG00000013465) Yellowtail amberjack MODERN SPECIES 2918 ccndx (ENSSLDG00000017032) nucb1 (ENSSLDG00000016990) PPFIA3 (ENSSLDG00000016928) ENSSLDG00000016903 ENSSLDG00000016813 ENSSLDG00000016769 bcat2 (ENSSLDG00000016728) ifi35 (ENSSLDG00000016692) rpl27 (ENSSLDG00000016677) RUNDC1 (ENSSLDG00000016668) ENSSLDG00000016624 ENSSLDG00000016597 slc25a39 (ENSSLDG00000016541) ENSSLDG00000016511 rpl3 (ENSSLDG00000016479) ENSSLDG00000016458 #22 CACNG2 (ENSSLDG00000016443) ENSSLDG00000016406 crlf3 (ENSSLDG00000016370) suz12a (ENSSLDG00000016341) ENSSLDG00000016323 tsen54 (ENSSLDG00000016303) ENSSLDG00000016272 ENSSLDG00000016242 ENSSLDG00000016196 ENSSLDG00000016175 ENSSLDG00000016151 dhrs7ca (ENSSLDG00000016136) ppan (ENSSLDG00000016106) p2ry11 (ENSSLDG00000016092) eif3g (ENSSLDG00000016076) Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000155379.h #22 Northern pike MODERN SPECIES 10 ENSELUG00000030602 ENSELUG00000025056 ENSELUG00000019710 SYT3 (ENSELUG00000019674) med25 (ENSELUG00000019639) LRRC4B (ENSELUG00000019583) mybpc2a (ENSELUG00000019562) emc10 (ENSELUG00000019500) zgc:195001 (ENSELUG00000019479) ENSELUG00000019475 tbc1d17 (ENSELUG00000000845) ccndx (ENSELUG00000001143) nucb1 (ENSELUG00000019424) PPFIA3 (ENSELUG00000019399) ENSELUG00000019283 ENSELUG00000019270 #22 ENSELUG00000019220 hsd17b14 (ENSELUG00000032495) bcat2 (ENSELUG00000019148) ifi35 (ENSELUG00000019119) rpl27 (ENSELUG00000019097) RUNDC1 (ENSELUG00000019078) ENSELUG00000019050 slc25a39 (ENSELUG00000018853) rpl3 (ENSELUG00000018807) ENSELUG00000018774 CACNG2 (ENSELUG00000018749) ENSELUG00000018729 ENSELUG00000018709 eif3d (ENSELUG00000018698) ENSELUG00000031273 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1953 ENSCMIG00000016645 #22 ENSCMIG00000016647 #23 pdhx (ENSCMIG00000016654) #24 Elephant shark MODERN SPECIES 1615 creb3l1 (ENSCMIG00000008616) PRR5L (ENSCMIG00000008621) #15 traf6 (ENSCMIG00000008626) #14 arhgap1 (ENSCMIG00000008630) PHF21A (ENSCMIG00000008636) cat (ENSCMIG00000008652) #28 f2 (ENSCMIG00000008697) ENSCMIG00000008713 PRDM11 (ENSCMIG00000008717) ENSCMIG00000008721 COMMD9 (ENSCMIG00000008724) #16 LDLRAD3 (ENSCMIG00000008729) #17 trim44 (ENSCMIG00000008733) #19 FJX1 (ENSCMIG00000008738) #20 PAMR1 (ENSCMIG00000008742) #21 SLC1A2 (ENSCMIG00000008745) #22 Cyclostomata ANCESTRAL SPECIES 226 ENSGT00940000154234 #21 ENSGT00940000155379 #22 ENSGT00530000063822 #23 Lamprey DUPLICATION Lamprey MODERN SPECIES 832 ENSPMAG00000001536 #21 SLC1A2 (ENSPMAG00000001533) #22 Lamprey MODERN SPECIES 304 ctsll (ENSPMAG00000006193) ENSPMAG00000006206 #22 ENSPMAG00000006210 #23 ENSPMAG00000006214 Hagfish MODERN SPECIES 299 slc1a2b (ENSEBUG00000000820) #22 ENSEBUG00000009894 ENSEBUG00000015129 ywhag1 (ENSEBUG00000010992) ENSEBUG00000011354 elovl6l (ENSEBUG00000014607) ENSEBUG00000013293 ENSEBUG00000008118 ENSEBUG00000013741 ENSEBUG00000014800 tyw5 (ENSEBUG00000006382) ENSEBUG00000014998 ENSEBUG00000007231