Pecora	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065 #7	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #21	ENSGT00940000154118.b.rb.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT00940000154256 #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Yarkand deer	MODERN SPECIES	22	INHBC (ENSCHYG00000001473) #7	R3HDM2 (ENSCHYG00000001549) #8	STAC3 (ENSCHYG00000001908) #9	NDUFA4L2 (ENSCHYG00000001961) #10	SHMT2 (ENSCHYG00000001992) #11	NXPH4 (ENSCHYG00000002015) #12	LRP1 (ENSCHYG00000002067) #13	STAT6 (ENSCHYG00000002302) #14	NAB2 (ENSCHYG00000002341) #15	NEMP1 (ENSCHYG00000002376) #16	MYO1A (ENSCHYG00000002446) #17	TAC3 (ENSCHYG00000002535) #18	ZBTB39 (ENSCHYG00000002554) #19	GPR182 (ENSCHYG00000002559) #20	ENSCHYG00000002565 #21	RDH16 (ENSCHYG00000002593) #22	SDR9C7 (ENSCHYG00000002626) #23	ENSCHYG00000002650 #24	HSD17B6 (ENSCHYG00000002745) #25	PRIM1 (ENSCHYG00000002764) #26	ENSCHYG00000002804 #27	ENSCHYG00000002851 #28	ATP5F1B (ENSCHYG00000002934) #29	BAZ2A (ENSCHYG00000002971) #30	RBMS2 (ENSCHYG00000003089) #31	GLS2 (ENSCHYG00000003128) #32	SPRYD4 (ENSCHYG00000003172) #33	MIP (ENSCHYG00000003178) #34	TIMELESS (ENSCHYG00000003196) #35	ENSCHYG00000003221 #36	APOF (ENSCHYG00000003234) #37
Percora_a	ANCESTRAL SPECIES	3	ENSGT00940000162107	ENSGT00940000160065 #7	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #21	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Siberian musk deer	MODERN SPECIES	1241	INHBE (ENSMMSG00000014142)	INHBC (ENSMMSG00000014131) #7	R3HDM2 (ENSMMSG00000013912) #8	STAC3 (ENSMMSG00000013843) #9	NDUFA4L2 (ENSMMSG00000013824) #10	ENSMMSG00000013800 #11	NXPH4 (ENSMMSG00000013785) #12	LRP1 (ENSMMSG00000013521) #13	STAT6 (ENSMMSG00000016988) #14	NAB2 (ENSMMSG00000016947) #15	NEMP1 (ENSMMSG00000016873) #16	MYO1A (ENSMMSG00000016701) #17	TAC3 (ENSMMSG00000016614) #18	ZBTB39 (ENSMMSG00000016599) #19	GPR182 (ENSMMSG00000016587) #20	ENSMMSG00000016565 #22	ENSMMSG00000016550	ENSMMSG00000016516 ##24	ENSMMSG00000016459 ##24	SDR9C7 (ENSMMSG00000016406) #23	ENSMMSG00000016383	ENSMMSG00000016333	HSD17B6 (ENSMMSG00000016311) #25	ENSMMSG00000016273	PRIM1 (ENSMMSG00000016240) #26	ENSMMSG00000016159 #27	ENSMMSG00000015953 #29	ENSMMSG00000015852 #30	RBMS2 (ENSMMSG00000015740) #31	GLS2 (ENSMMSG00000015620) #32	SPRYD4 (ENSMMSG00000015594) #33
Bovidae	ANCESTRAL SPECIES	3	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00940000154118.b.rb.b.a ##24	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a ##25	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #21	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Bovinae	ANCESTRAL SPECIES	17	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a ##25	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b ##24	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.a.b #21	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34
Bos	ANCESTRAL SPECIES	2	ENSGT00940000160065 #7	ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b ##24	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.a.b #21	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33
Bos_a	ANCESTRAL SPECIES	3	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000162028.a.a ##25	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b ##24	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.a.b #21	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33
Domestic yak	MODERN SPECIES	24	NDUFA4L2 (ENSBGRG00000005360) #10	SHMT2 (ENSBGRG00000005148) #11	NXPH4 (ENSBGRG00000005113) #12	LRP1 (ENSBGRG00000004617) #13	STAT6 (ENSBGRG00000004366) #14	NAB2 (ENSBGRG00000004277) #15	ENSBGRG00000004255	ENSBGRG00000004233	NEMP1 (ENSBGRG00000004148) #16	MYO1A (ENSBGRG00000004047) #17	ENSBGRG00000003965 #18	ZBTB39 (ENSBGRG00000003920) #19	GPR182 (ENSBGRG00000003907) #20	ENSBGRG00000003857	ENSBGRG00000003844 ##25	ENSBGRG00000003798 #22	ENSBGRG00000003774 ##24	SDR9C7 (ENSBGRG00000003657) #23	ENSBGRG00000003614	ENSBGRG00000003600 #24	ENSBGRG00000003589 #21	HSD17B6 (ENSBGRG00000003564) #25	PRIM1 (ENSBGRG00000003542) #26	ENSBGRG00000003514 #27	ENSBGRG00000003503	ENSBGRG00000003401 #28	ATP5F1B (ENSBGRG00000003323) #29	BAZ2A (ENSBGRG00000003190) #30	RBMS2 (ENSBGRG00000003102) #31	GLS2 (ENSBGRG00000002966) #32	SPRYD4 (ENSBGRG00000002935) #33
Wild yak	MODERN SPECIES	1313	R3HDM2 (ENSBMUG00000025750) #8	STAC3 (ENSBMUG00000025762) #9	ENSBMUG00000025768	SHMT2 (ENSBMUG00000025780) #11	NXPH4 (ENSBMUG00000025791) #12	LRP1 (ENSBMUG00000025810) #13	STAT6 (ENSBMUG00000025845) #14	NAB2 (ENSBMUG00000025857) #15	NEMP1 (ENSBMUG00000025867) #16	MYO1A (ENSBMUG00000025873) #17	TAC3 (ENSBMUG00000025885) #18	ZBTB39 (ENSBMUG00000025891) #19	GPR182 (ENSBMUG00000025895) #20	ENSBMUG00000025901	ENSBMUG00000025907 #21	ENSBMUG00000025910 #22	ENSBMUG00000025913 ##24	ENSBMUG00000025922 ##24	SDR9C7 (ENSBMUG00000025927) #23
Bos_b	ANCESTRAL SPECIES	4	ENSGT00940000160065 #7	ENSGT00940000155609.i #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000011666.h.b.b.a.a	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000154118.b.rb.a.b ##24	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.a #27	ENSGT01100000263481.n.a.b.a.b.a.b.b	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34
Hybrid Bos Indicus	MODERN SPECIES	24	INHBC (ENSBIXG00005012395) #7	ENSBIXG00005001373 #8	STAC3 (ENSBIXG00005012603) #9	NDUFA4L2 (ENSBIXG00005012626) #10	SHMT2 (ENSBIXG00005012660) #11	NXPH4 (ENSBIXG00005012677) #12	LRP1 (ENSBIXG00005012721) #13	STAT6 (ENSBIXG00005001415) #14	NAB2 (ENSBIXG00005007004) #15	NEMP1 (ENSBIXG00005012888) #16	MYO1A (ENSBIXG00005013026) #17	TAC3 (ENSBIXG00005013089) #18	ZBTB39 (ENSBIXG00005013102) #19	GPR182 (ENSBIXG00005013112) #20	ENSBIXG00005013123	ENSBIXG00005013438 #22	ENSBIXG00005013487 ##24	ENSBIXG00005013505 ##24	SDR9C7 (ENSBIXG00005013558) #23	ENSBIXG00005013575	ENSBIXG00005013779 #24	HSD17B6 (ENSBIXG00005013894) #25	PRIM1 (ENSBIXG00005013939) #26	ENSBIXG00005014024 #27	PTGES3 (ENSBIXG00005014081) #28	ATP5F1B (ENSBIXG00005001839) #29	BAZ2A (ENSBIXG00005014206) #30	RBMS2 (ENSBIXG00005000251) #31	GLS2 (ENSBIXG00005014289) #32	SPRYD4 (ENSBIXG00005001889) #33	MIP (ENSBIXG00005014332) #34
Cow	MODERN SPECIES	24	INHBC (ENSBTAG00000019084) #7	R3HDM2 (ENSBTAG00000018361) #8	STAC3 (ENSBTAG00000018358) #9	NDUFA4L2 (ENSBTAG00000031503) #10	SHMT2 (ENSBTAG00000031500) #11	NXPH4 (ENSBTAG00000047650) #12	LRP1 (ENSBTAG00000010830) #13	STAT6 (ENSBTAG00000006335) #14	NAB2 (ENSBTAG00000006324) #15	ENSBTAG00000031076	NEMP1 (ENSBTAG00000014659) #16	MYO1A (ENSBTAG00000014655) #17	TAC3 (ENSBTAG00000021807) #18	ZBTB39 (ENSBTAG00000038498) #19	GPR182 (ENSBTAG00000039157) #20	ENSBTAG00000049081 #22	ENSBTAG00000050051 ##24	RDH16 (ENSBTAG00000001392) ##24	SDR9C7 (ENSBTAG00000013443) #23	ENSBTAG00000055155	ENSBTAG00000051761 #24	HSD17B6 (ENSBTAG00000011720) #25	PRIM1 (ENSBTAG00000044000) #26	NACA (ENSBTAG00000010701) #27	ENSBTAG00000055262	PTGES3 (ENSBTAG00000017967) #28	ATP5F1B (ENSBTAG00000013315) #29	BAZ2A (ENSBTAG00000017840) #30	RBMS2 (ENSBTAG00000017830) #31	SPRYD4 (ENSBTAG00000009281) #33	GLS2 (ENSBTAG00000009284) #32
American bison	MODERN SPECIES	3043	R3HDM2 (ENSBBBG00000012343) #8	STAC3 (ENSBBBG00000009086) #9	NDUFA4L2 (ENSBBBG00000012377) #10	SHMT2 (ENSBBBG00000012405) #11	NXPH4 (ENSBBBG00000002374) #12	LRP1 (ENSBBBG00000012523) #13	STAT6 (ENSBBBG00000012670) #14	NAB2 (ENSBBBG00000001815) #15	ENSBBBG00000012717	NEMP1 (ENSBBBG00000012736) #16	MYO1A (ENSBBBG00000007932) #17	TAC3 (ENSBBBG00000012783) #18	ZBTB39 (ENSBBBG00000002475) #19	GPR182 (ENSBBBG00000012789) #20	ENSBBBG00000012805	ENSBBBG00000012808 #22	ENSBBBG00000012963 ##24	ENSBBBG00000012989 ##24	SDR9C7 (ENSBBBG00000013000) #23	ENSBBBG00000013007	ENSBBBG00000007888 #21	HSD17B6 (ENSBBBG00000013035) #25	PRIM1 (ENSBBBG00000013047) #26	ENSBBBG00000013066 #27	PTGES3 (ENSBBBG00000013107) #28	ATP5F1B (ENSBBBG00000002642) #29	BAZ2A (ENSBBBG00000002669) #30	RBMS2 (ENSBBBG00000013272) #31	GLS2 (ENSBBBG00000013300) #32	SPRYD4 (ENSBBBG00000002703) #33	MIP (ENSBBBG00000013310) #34
Caprinae	ANCESTRAL SPECIES		ENSGT00940000155609 #8	ENSGT00950000183092.a #9	ENSGT00940000161040 #10	ENSGT00390000002762.a.a #11	ENSGT00950000182883.b.a.b #12	ENSGT00940000157899.b #13	ENSGT01080000257420.C.b.a #14	ENSGT00390000006330.a.b #15	ENSGT00390000002174.a #16	ENSGT00940000160660 #17	ENSGT00390000000335 #18	ENSGT00940000160722 #19	ENSGT00940000154307.D #20	ENSGT00940000154118.b.rb.b.a ##24	ENSGT00950000182834.A.a.a.w.a	ENSGT00940000154118.b.rb.a.a #22	ENSGT00940000162028.a.b #21	ENSGT00940000154118.b.rb.b.b ##24	ENSGT00940000161764 #23	ENSGT00940000154118.b.sb #24	ENSGT00940000162028.b #25	ENSGT00390000011466 #26	ENSGT00440000033468.c.b.r ##27	ENSGT00940000154256.yb #28	ENSGT00550000074800 #29	ENSGT00940000159490 #30	ENSGT00940000155250 #31	ENSGT00390000010463.a.a.a #32	ENSGT00940000159780 #33	ENSGT00940000156260 #34	ENSGT00390000015124 #35
Rambouillet Sheep	MODERN SPECIES	19	INHBC (ENSOARG00020001401) #7	R3HDM2 (ENSOARG00020001425) #8	STAC3 (ENSOARG00020001529) #9	NDUFA4L2 (ENSOARG00020001582) #10	SHMT2 (ENSOARG00020001596) #11	NXPH4 (ENSOARG00020001623) #12	LRP1 (ENSOARG00020001685) #13	STAT6 (ENSOARG00020001933) #14	NAB2 (ENSOARG00020002028) #15	NEMP1 (ENSOARG00020002060) #16	MYO1A (ENSOARG00020002126) #17	TAC3 (ENSOARG00020002146) #18	ZBTB39 (ENSOARG00020002175) #19	GPR182 (ENSOARG00020002179) #20	ENSOARG00020002192 ##24	ENSOARG00020002206 #22	ENSOARG00020002217 #21	ENSOARG00020002226 ##24	SDR9C7 (ENSOARG00020002232) #23	ENSOARG00020002244	ENSOARG00020002250 #21	HSD17B6 (ENSOARG00020002262) #25	PRIM1 (ENSOARG00020002282) #26	ENSOARG00020002301 ##27	ENSOARG00020002335 #28	ATP5F1B (ENSOARG00020002370) #29	BAZ2A (ENSOARG00020002394) #30	RBMS2 (ENSOARG00020002450) #31	ENSOARG00020002476	GLS2 (ENSOARG00020002498) #32	SPRYD4 (ENSOARG00020002567) #33
Goat	MODERN SPECIES	24	ENSCHIG00000007552	R3HDM2 (ENSCHIG00000014022) #8	STAC3 (ENSCHIG00000000887) #9	SHMT2 (ENSCHIG00000003271) #11	NXPH4 (ENSCHIG00000003451) #12	LRP1 (ENSCHIG00000024408) #13	STAT6 (ENSCHIG00000025666) #14	NAB2 (ENSCHIG00000019285) #15	NEMP1 (ENSCHIG00000015757) #16	MYO1A (ENSCHIG00000011774) #17	TAC3 (ENSCHIG00000026341) #18	ZBTB39 (ENSCHIG00000001253) #19	GPR182 (ENSCHIG00000008110) #20	ENSCHIG00000012307	ENSCHIG00000024299 #22	ENSCHIG00000010628 #22	ENSCHIG00000025887 ##24	ENSCHIG00000022462 ##24	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000008219	ENSCHIG00000027068 #24	HSD17B6 (ENSCHIG00000012163) #25	PRIM1 (ENSCHIG00000026915) #26	ENSCHIG00000013646 ##27	ENSCHIG00000011269 #28	ATP5F1B (ENSCHIG00000010757) #29	BAZ2A (ENSCHIG00000025797) #30	RBMS2 (ENSCHIG00000020791) #31	ENSCHIG00000017636	GLS2 (ENSCHIG00000009891) #32	SPRYD4 (ENSCHIG00000021196) #33
Goat	MODERN SPECIES	24	INHBC (ENSCHIG00000017660) #7	ENSCHIG00000007552	R3HDM2 (ENSCHIG00000014022) #8	STAC3 (ENSCHIG00000000887) #9	SHMT2 (ENSCHIG00000003271) #11	NXPH4 (ENSCHIG00000003451) #12	LRP1 (ENSCHIG00000024408) #13	STAT6 (ENSCHIG00000025666) #14	NAB2 (ENSCHIG00000019285) #15	NEMP1 (ENSCHIG00000015757) #16	MYO1A (ENSCHIG00000011774) #17	TAC3 (ENSCHIG00000026341) #18	ZBTB39 (ENSCHIG00000001253) #19	GPR182 (ENSCHIG00000008110) #20	ENSCHIG00000012307	ENSCHIG00000024299 #22	ENSCHIG00000010628 #22	ENSCHIG00000025887 ##24	ENSCHIG00000022462 ##24	SDR9C7 (ENSCHIG00000026773) #23	ENSCHIG00000008219	ENSCHIG00000027068 #24	HSD17B6 (ENSCHIG00000012163) #25	PRIM1 (ENSCHIG00000026915) #26	ENSCHIG00000013646 ##27	ENSCHIG00000011269 #28	ATP5F1B (ENSCHIG00000010757) #29	BAZ2A (ENSCHIG00000025797) #30	RBMS2 (ENSCHIG00000020791) #31	ENSCHIG00000017636	GLS2 (ENSCHIG00000009891) #32