Euarchontoglires	ANCESTRAL SPECIES	3	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147890	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35
Euarchontoglires_A	ANCESTRAL SPECIES	3	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Glires	ANCESTRAL SPECIES	15	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Rodentia	ANCESTRAL SPECIES	3	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Rodentia_A	ANCESTRAL SPECIES	2	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Hystricomorpha	ANCESTRAL SPECIES	36	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.vb #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Naked mole-rat female	MODERN SPECIES	19	HACD3 (ENSHGLG00000011870) #7	INTS14 (ENSHGLG00000010722) #8	SLC24A1 (ENSHGLG00000008872) #9	DENND4A (ENSHGLG00000009810) #10	ENSHGLG00000044288 #11	RAB11A (ENSHGLG00000048551) #12	MEGF11 (ENSHGLG00000011012) #13	ENSHGLG00000007770 #14	ENSHGLG00000005971 #15	ENSHGLG00000048822 #16	ENSHGLG00000010036 #17	ENSHGLG00000040904 #18	ENSHGLG00000008054 #19	ZWILCH (ENSHGLG00000016059) #20	LCTL (ENSHGLG00000015669) #21	SMAD6 (ENSHGLG00000008453) #22	SMAD3 (ENSHGLG00000048787) #23	AAGAB (ENSHGLG00000038898) #24	ENSHGLG00000026352 #25	C15orf61 (ENSHGLG00000038870) #26	MAP2K5 (ENSHGLG00000006627) #27	SKOR1 (ENSHGLG00000017297) #28	Pias1 (ENSHGLG00000019002) #29	Calml4 (ENSHGLG00000018794) #30	CLN6 (ENSHGLG00000017958) #31	FEM1B (ENSHGLG00000017948) #32	ITGA11 (ENSHGLG00000007233) #33	CORO2B (ENSHGLG00000015273) #34	ENSHGLG00000013229 #35	SPESP1 (ENSHGLG00000046924) #36	GLCE (ENSHGLG00000033764) #37
Hystricomorpha_a	ANCESTRAL SPECIES	38	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.vb #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Guinea pig	MODERN SPECIES		SNX1 (ENSCPOG00000000253)	CIAO2A (ENSCPOG00000033175)	DAPK2 (ENSCPOG00000000890)	ENSCPOG00000030019	ENSCPOG00000007146	PTP4A1 (ENSCPOG00000032105)	LGSN (ENSCPOG00000008736)	KHDRBS2 (ENSCPOG00000025621)	PRIM2 (ENSCPOG00000003912)	ENSCPOG00000035048	RAB23 (ENSCPOG00000030218)	BAG2 (ENSCPOG00000040302)	ZNF451 (ENSCPOG00000002491)	BEND6 (ENSCPOG00000015453)	DST (ENSCPOG00000005092)	SMAD6 (ENSCPOG00000001535) #22	SMAD3 (ENSCPOG00000021314) #23	AAGAB (ENSCPOG00000000965) #24	C15orf61 (ENSCPOG00000022542) #26	MAP2K5 (ENSCPOG00000000970) #27	SKOR1 (ENSCPOG00000012665) #28	PIAS1 (ENSCPOG00000007278) #29	CALML4 (ENSCPOG00000033517) #30	CLN6 (ENSCPOG00000007282) #31	FEM1B (ENSCPOG00000031057) #32	ITGA11 (ENSCPOG00000012877) #33	CORO2B (ENSCPOG00000023117) #34	ENSCPOG00000008829 #35	GLCE (ENSCPOG00000020608) #37
Hystricomorpha_b	ANCESTRAL SPECIES	35	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.vb #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Degu	MODERN SPECIES	67	IGDCC4 (ENSODEG00000016455)	DPP8 (ENSODEG00000016356)	HACD3 (ENSODEG00000016975) #7	INTS14 (ENSODEG00000017006) #8	SLC24A1 (ENSODEG00000016047) #9	ENSODEG00000016544 #10	ENSODEG00000016435	ENSODEG00000016878 #12	MEGF11 (ENSODEG00000015967) #13	DIS3L (ENSODEG00000015811) #14	MAP2K1 (ENSODEG00000016739) #17	ENSODEG00000016495 ##19	ZWILCH (ENSODEG00000016374) #20	LCTL (ENSODEG00000016271) #21	ENSODEG00000020317	SMAD6 (ENSODEG00000016272) #22	SMAD3 (ENSODEG00000015739) #23	ENSODEG00000015886 #24	ENSODEG00000020336	IQCH (ENSODEG00000016134) #25	C15orf61 (ENSODEG00000016721) #26	ENSODEG00000016511	MAP2K5 (ENSODEG00000015607) #27	SKOR1 (ENSODEG00000015903) #28	PIAS1 (ENSODEG00000016418) #29	CALML4 (ENSODEG00000015441) #30	CLN6 (ENSODEG00000015888) #31	ENSODEG00000016475 #32	ENSODEG00000020366	ITGA11 (ENSODEG00000015700) #33	CORO2B (ENSODEG00000016099) #34
Long-tailed chinchilla	MODERN SPECIES	157	IGDCC4 (ENSCLAG00000007751)	DPP8 (ENSCLAG00000014937)	HACD3 (ENSCLAG00000010725) #7	INTS14 (ENSCLAG00000009395) #8	SLC24A1 (ENSCLAG00000013073) #9	DENND4A (ENSCLAG00000007003) #10	RAB11A (ENSCLAG00000007435) #12	MEGF11 (ENSCLAG00000013146) #13	DIS3L (ENSCLAG00000005741) #14	TIPIN (ENSCLAG00000004924) #15	MAP2K1 (ENSCLAG00000013042) #17	SNAPC5 (ENSCLAG00000011660) #18	RPL4 (ENSCLAG00000010827) #19	ZWILCH (ENSCLAG00000010124) #20	LCTL (ENSCLAG00000004564) #21	ENSCLAG00000005550 #22	SMAD3 (ENSCLAG00000005027) #23	AAGAB (ENSCLAG00000008364) #24	IQCH (ENSCLAG00000011031) #25	C15orf61 (ENSCLAG00000008894) #26	MAP2K5 (ENSCLAG00000005277) #27	SKOR1 (ENSCLAG00000007488) #28	PIAS1 (ENSCLAG00000008129) #29	CALML4 (ENSCLAG00000008707) #30	CLN6 (ENSCLAG00000007035) #31	FEM1B (ENSCLAG00000004834) #32	ITGA11 (ENSCLAG00000006568) #33	CORO2B (ENSCLAG00000006658) #34	ENSCLAG00000010256 #35	SPESP1 (ENSCLAG00000009992) #36	GLCE (ENSCLAG00000009057) #37
Sciuridae	ANCESTRAL SPECIES	11	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Marmotini	ANCESTRAL SPECIES	9	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Marmotini_b	ANCESTRAL SPECIES	4	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00940000162591
Squirrel	MODERN SPECIES	71	DPP8 (ENSSTOG00000002203)	ENSSTOG00000025872	HACD3 (ENSSTOG00000002211) #7	INTS14 (ENSSTOG00000002217) #8	SLC24A1 (ENSSTOG00000002228) #9	DENND4A (ENSSTOG00000026966) #10	RAB11A (ENSSTOG00000015255) #12	MEGF11 (ENSSTOG00000015258) #13	DIS3L (ENSSTOG00000009158) #14	TIPIN (ENSSTOG00000009182) #15	MAP2K1 (ENSSTOG00000009190) #17	SNAPC5 (ENSSTOG00000009201) #18	RPL4 (ENSSTOG00000009221) #19	ZWILCH (ENSSTOG00000009607) #20	LCTL (ENSSTOG00000028073) #21	SMAD6 (ENSSTOG00000000696) #22	SMAD3 (ENSSTOG00000010286) #23	AAGAB (ENSSTOG00000010291) #24	IQCH (ENSSTOG00000010299) #25	C15orf61 (ENSSTOG00000010312) #26	MAP2K5 (ENSSTOG00000010318) #27	SKOR1 (ENSSTOG00000002675) #28	PIAS1 (ENSSTOG00000015532) #29	CALML4 (ENSSTOG00000015539) #30	CLN6 (ENSSTOG00000015540) #31	FEM1B (ENSSTOG00000015544) #32	ITGA11 (ENSSTOG00000015545) #33	CORO2B (ENSSTOG00000015918) #34	ENSSTOG00000015929 #35	GLCE (ENSSTOG00000019509) #37	PAQR5 (ENSSTOG00000000507)
Arctic ground squirrel	MODERN SPECIES	397											MAP2K1 (ENSUPAG00010018149) #17	SNAPC5 (ENSUPAG00010018142) #18	RPL4 (ENSUPAG00010018119) #19	ZWILCH (ENSUPAG00010018079) #20	LCTL (ENSUPAG00010018063) #21	SMAD6 (ENSUPAG00010018050) #22	ENSUPAG00010018048	SMAD3 (ENSUPAG00010018010) #23	AAGAB (ENSUPAG00010018001) #24	IQCH (ENSUPAG00010017914) #25	C15orf61 (ENSUPAG00010017904) #26	MAP2K5 (ENSUPAG00010017819) #27	SKOR1 (ENSUPAG00010017792) #28	ENSUPAG00010017781	PIAS1 (ENSUPAG00010017772) #29	CALML4 (ENSUPAG00010017747) #30	CLN6 (ENSUPAG00010017740) #31	FEM1B (ENSUPAG00010017736) #32	ITGA11 (ENSUPAG00010017705) #33
Alpin marmot	MODERN SPECIES	7	HACD3 (ENSMMMG00000006884) #7	INTS14 (ENSMMMG00000006868) #8	SLC24A1 (ENSMMMG00000006817) #9	DENND4A (ENSMMMG00000006769) #10	ENSMMMG00000006762	RAB11A (ENSMMMG00000006747) #12	MEGF11 (ENSMMMG00000006311) #13	DIS3L (ENSMMMG00000006220) #14	TIPIN (ENSMMMG00000006196) #15	MAP2K1 (ENSMMMG00000006173) #17	SNAPC5 (ENSMMMG00000006163) #18	RPL4 (ENSMMMG00000006109) #19	ENSMMMG00000006104	ZWILCH (ENSMMMG00000006077) #20	LCTL (ENSMMMG00000006061) #21	SMAD6 (ENSMMMG00000006032) #22	ENSMMMG00000006027	SMAD3 (ENSMMMG00000005977) #23	AAGAB (ENSMMMG00000005970) #24	IQCH (ENSMMMG00000005869) #25	ENSMMMG00000005844	MAP2K5 (ENSMMMG00000005809) #27	SKOR1 (ENSMMMG00000005773) #28	PIAS1 (ENSMMMG00000005733) #29	CALML4 (ENSMMMG00000005699) #30	CLN6 (ENSMMMG00000005687) #31	ENSMMMG00000005671 #32	ITGA11 (ENSMMMG00000005622) #33	CORO2B (ENSMMMG00000005600) #34	ENSMMMG00000005555 #35	SPESP1 (ENSMMMG00000005545) #36
Eurasian red squirrel	MODERN SPECIES	11	DPP8 (ENSSVLG00005023347)	ENSSVLG00005023642	HACD3 (ENSSVLG00005023708) #7	INTS14 (ENSSVLG00005023820) #8	SLC24A1 (ENSSVLG00005023979) #9	DENND4A (ENSSVLG00005024160) #10	RAB11A (ENSSVLG00005024246) #12	MEGF11 (ENSSVLG00005024351) #13	DIS3L (ENSSVLG00005024622) #14	TIPIN (ENSSVLG00005024668) #15	MAP2K1 (ENSSVLG00005024707) #17	SNAPC5 (ENSSVLG00005024729) #18	ENSSVLG00005024744 #19	ZWILCH (ENSSVLG00005024833) #20	LCTL (ENSSVLG00005024912) #21	SMAD6 (ENSSVLG00005024946) #22	ENSSVLG00005024968	SMAD3 (ENSSVLG00005024991) #23	AAGAB (ENSSVLG00005025018) #24	IQCH (ENSSVLG00005025085) #25	C15orf61 (ENSSVLG00005006592) #26	MAP2K5 (ENSSVLG00005006656) #27	SKOR1 (ENSSVLG00005006917) #28	PIAS1 (ENSSVLG00005007019) #29	CALML4 (ENSSVLG00005007109) #30	CLN6 (ENSSVLG00005007215) #31	FEM1B (ENSSVLG00005007302) #32	ITGA11 (ENSSVLG00005007326) #33	CORO2B (ENSSVLG00005007364) #34	ENSSVLG00005007452 #35	ENSSVLG00005007513
Rodentia_B	ANCESTRAL SPECIES	11	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Myomorpha	ANCESTRAL SPECIES	25	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Muroidea	ANCESTRAL SPECIES	23	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Muroidea_A	ANCESTRAL SPECIES	6	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Cricetidae	ANCESTRAL SPECIES	4	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Cricetidae_B	ANCESTRAL SPECIES	24	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Northern American deer mouse	MODERN SPECIES	20	Igdcc4 (ENSPEMG00000020857)	Dpp8 (ENSPEMG00000024195)	Hacd3 (ENSPEMG00000008076) #7	Ints14 (ENSPEMG00000008550) #8	Slc24a1 (ENSPEMG00000022814) #9	Dennd4a (ENSPEMG00000022452) #10	ENSPEMG00000021125 #12	Megf11 (ENSPEMG00000017797) #13	Dis3l (ENSPEMG00000001213) #14	Tipin (ENSPEMG00000002370) #15	Map2k1 (ENSPEMG00000007282) #17	Snapc5 (ENSPEMG00000007852) #18	Rpl4 (ENSPEMG00000012064) #19	Zwilch (ENSPEMG00000014485) #20	Lctl (ENSPEMG00000016229) #21	Smad6 (ENSPEMG00000017040) #22	Smad3 (ENSPEMG00000028676) #23	Aagab (ENSPEMG00000018465) #24	ENSPEMG00000028831	Iqch (ENSPEMG00000005753) #25	2300009A05Rik (ENSPEMG00000009306) #26	Map2k5 (ENSPEMG00000010361) #27	Skor1 (ENSPEMG00000010499) #28	Pias1 (ENSPEMG00000012119) #29	Calml4 (ENSPEMG00000012833) #30	Cln6 (ENSPEMG00000030484) #31	ENSPEMG00000000682	Fem1b (ENSPEMG00000028410) #32	Itga11 (ENSPEMG00000014149) #33	Coro2b (ENSPEMG00000016326) #34	Anp32a (ENSPEMG00000017392) #35
Prairie vole	MODERN SPECIES	13	Igdcc4 (ENSMOCG00000017733)	Dpp8 (ENSMOCG00000018103)	Hacd3 (ENSMOCG00000004995) #7	Ints14 (ENSMOCG00000020364) #8	Slc24a1 (ENSMOCG00000002968) #9	Dennd4a (ENSMOCG00000008521) #10	Rab11a (ENSMOCG00000021138) #12	Megf11 (ENSMOCG00000003573) #13	Dis3l (ENSMOCG00000005278) #14	Tipin (ENSMOCG00000010343) #15	Map2k1 (ENSMOCG00000013072) #17	Snapc5 (ENSMOCG00000015348) #18	ENSMOCG00000021901 #19	Zwilch (ENSMOCG00000017159) #20	Lctl (ENSMOCG00000004744) #21	Smad6 (ENSMOCG00000014458) #22	Smad3 (ENSMOCG00000018490) #23	Aagab (ENSMOCG00000021340) #24	Iqch (ENSMOCG00000016873) #25	2300009A05Rik (ENSMOCG00000013991) #26	Map2k5 (ENSMOCG00000022058) #27	Skor1 (ENSMOCG00000018261) #28	ENSMOCG00000019235	Pias1 (ENSMOCG00000022074) #29	Calml4 (ENSMOCG00000018493) #30	Cln6 (ENSMOCG00000021992) #31	Fem1b (ENSMOCG00000005442) #32	Itga11 (ENSMOCG00000003119) #33	Coro2b (ENSMOCG00000011097) #34	ENSMOCG00000004428 #35	ENSMOCG00000014776 #35
Cricetinae	ANCESTRAL SPECIES	6	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.kb #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Chinese hamster chok1gshd	MODERN SPECIES	284	Parp16 (ENSCGRG00001011381)	Igdcc3 (ENSCGRG00001015803)	Igdcc4 (ENSCGRG00001004819)	Dpp8 (ENSCGRG00001024771)	Hacd3 (ENSCGRG00001019214) #7	Ints14 (ENSCGRG00001022061) #8	Slc24a1 (ENSCGRG00001023812) #9	Dennd4a (ENSCGRG00001019979) #10	Rab11a (ENSCGRG00001023313) #12	Megf11 (ENSCGRG00001019210) #13	Dis3l (ENSCGRG00001017825) #14	Tipin (ENSCGRG00001018146) #15	Snapc5 (ENSCGRG00001013968) #18	Zwilch (ENSCGRG00001018206) #20	Lctl (ENSCGRG00001017716) #21	Smad6 (ENSCGRG00001002733) #22	Smad3 (ENSCGRG00001013999) #23	Aagab (ENSCGRG00001020082) #24	Iqch (ENSCGRG00001006084) #25	ENSCGRG00001000811	2300009A05Rik (ENSCGRG00001009275) #26	Map2k5 (ENSCGRG00001024707) #27	Skor1 (ENSCGRG00001000300) #28	Pias1 (ENSCGRG00001018818) #29	Calml4 (ENSCGRG00001023410) #30	Cln6 (ENSCGRG00001016348) #31	Fem1b (ENSCGRG00001018487) #32	Itga11 (ENSCGRG00001016586) #33	Coro2b (ENSCGRG00001025051) #34	ENSCGRG00001022637 #35	Spesp1 (ENSCGRG00001015906) #36
Golden Hamster	MODERN SPECIES	672	Igdcc4 (ENSMAUG00000021589)	Dpp8 (ENSMAUG00000020059)	Hacd3 (ENSMAUG00000004278) #7	Ints14 (ENSMAUG00000020937) #8	Slc24a1 (ENSMAUG00000012813) #9	Dennd4a (ENSMAUG00000018527) #10	Rab11a (ENSMAUG00000018551) #12	Megf11 (ENSMAUG00000003129) #13	Dis3l (ENSMAUG00000008265) #14	Tipin (ENSMAUG00000012421) #15	Map2k1 (ENSMAUG00000011379) #17	Snapc5 (ENSMAUG00000008645) #18	Rpl4 (ENSMAUG00000018867) #19	Zwilch (ENSMAUG00000021210) #20	Lctl (ENSMAUG00000009957) #21	Smad6 (ENSMAUG00000009859) #22	Smad3 (ENSMAUG00000022258) #23	Aagab (ENSMAUG00000005383) #24	Iqch (ENSMAUG00000004333) #25	Map2k5 (ENSMAUG00000015370) #27	Skor1 (ENSMAUG00000020780) #28	Pias1 (ENSMAUG00000000785) #29	Calml4 (ENSMAUG00000015006) #30	Cln6 (ENSMAUG00000009546) #31	Itga11 (ENSMAUG00000002222) #33	Coro2b (ENSMAUG00000009618) #34	Anp32a (ENSMAUG00000000632) #35	Spesp1 (ENSMAUG00000008837) #36	Glce (ENSMAUG00000013447) #37	Paqr5 (ENSMAUG00000009377)	Kif23 (ENSMAUG00000009848)
Murinae	ANCESTRAL SPECIES	3	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Mus	ANCESTRAL SPECIES	4	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Mus_A	ANCESTRAL SPECIES	4	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Mus_B	ANCESTRAL SPECIES	3	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000154925.c.a	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859.e.b #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Mouse	MODERN SPECIES	18	Dpp8 (ENSMUSG00000032393)	Hacd3 (ENSMUSG00000033629) #7	Ints14 (ENSMUSG00000034263) #8	Slc24a1 (ENSMUSG00000034452) #9	Dennd4a (ENSMUSG00000053641) #10	Rab11a (ENSMUSG00000004771) #12	Megf11 (ENSMUSG00000036466) #13	Dis3l (ENSMUSG00000032396) #14	Tipin (ENSMUSG00000032397) #15	Uchl4 (ENSMUSG00000035337)	Map2k1 (ENSMUSG00000004936) #17	Snapc5 (ENSMUSG00000032398) #18	Rpl4 (ENSMUSG00000032399) #19	Zwilch (ENSMUSG00000032400) #20	Lctl (ENSMUSG00000032401) #21	Smad6 (ENSMUSG00000036867) #22	Smad3 (ENSMUSG00000032402) #23	Aagab (ENSMUSG00000037257) #24	Iqch (ENSMUSG00000037801) #25	2300009A05Rik (ENSMUSG00000032403) #26	Map2k5 (ENSMUSG00000058444) #27	Skor1 (ENSMUSG00000022245) #28	Pias1 (ENSMUSG00000032405) #29	Calml4 (ENSMUSG00000032246) #30	Cln6 (ENSMUSG00000032245) #31	Fem1b (ENSMUSG00000032244) #32	Itga11 (ENSMUSG00000032243) #33	Coro2b (ENSMUSG00000041729) #34	Anp32a (ENSMUSG00000032249) #35	Spesp1 (ENSMUSG00000046846) #36	Glce (ENSMUSG00000032252) #37
Mus_C	ANCESTRAL SPECIES	8	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000154925.c.a	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859.e.b #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
spretus	MODERN SPECIES	18	Dpp8 (MGP_SPRETEiJ_G0033490)	Hacd3 (MGP_SPRETEiJ_G0033489) #7	Ints14 (MGP_SPRETEiJ_G0033488) #8	Slc24a1 (MGP_SPRETEiJ_G0033487) #9	Dennd4a (MGP_SPRETEiJ_G0033486) #10	Rab11a (MGP_SPRETEiJ_G0033485) #12	Megf11 (MGP_SPRETEiJ_G0033484) #13	Dis3l (MGP_SPRETEiJ_G0033483) #14	Tipin (MGP_SPRETEiJ_G0033482) #15	MGP_SPRETEiJ_G0033481	Map2k1 (MGP_SPRETEiJ_G0033480) #17	Snapc5 (MGP_SPRETEiJ_G0033479) #18	Rpl4 (MGP_SPRETEiJ_G0033478) #19	Zwilch (MGP_SPRETEiJ_G0033477) #20	Lctl (MGP_SPRETEiJ_G0033476) #21	Smad6 (MGP_SPRETEiJ_G0033475) #22	Smad3 (MGP_SPRETEiJ_G0033474) #23	Aagab (MGP_SPRETEiJ_G0033473) #24	Iqch (MGP_SPRETEiJ_G0033472) #25	2300009A05Rik (MGP_SPRETEiJ_G0033471) #26	Map2k5 (MGP_SPRETEiJ_G0033470) #27	Skor1 (MGP_SPRETEiJ_G0033469) #28	Pias1 (MGP_SPRETEiJ_G0033468) #29	Calml4 (MGP_SPRETEiJ_G0033467) #30	MGP_SPRETEiJ_G0033466	Cln6 (MGP_SPRETEiJ_G0033465) #31	Fem1b (MGP_SPRETEiJ_G0033464) #32	Itga11 (MGP_SPRETEiJ_G0033463) #33	Coro2b (MGP_SPRETEiJ_G0033462) #34	Anp32a (MGP_SPRETEiJ_G0033461) #35	Spesp1 (MGP_SPRETEiJ_G0033460) #36
Steppe mouse	MODERN SPECIES	3365	Ints14 (ENSMSIG00000005077) #8	Slc24a1 (ENSMSIG00000005039) #9	Dennd4a (ENSMSIG00000004975) #10	Rab11a (ENSMSIG00000004938) #12	Megf11 (ENSMSIG00000004481) #13	Dis3l (ENSMSIG00000004353) #14	Tipin (ENSMSIG00000004296) #15	Uchl4 (ENSMSIG00000004289)	Map2k1 (ENSMSIG00000004246) #17	Snapc5 (ENSMSIG00000004231) #18	Rpl4 (ENSMSIG00000004124) #19	Zwilch (ENSMSIG00000003872) #20	Lctl (ENSMSIG00000003776) #21	ENSMSIG00000003769	ENSMSIG00000003749	Smad6 (ENSMSIG00000003718) #22	ENSMSIG00000003710	Smad3 (ENSMSIG00000003679) #23	Aagab (ENSMSIG00000003642) #24	ENSMSIG00000003630	Iqch (ENSMSIG00000002651) #25	2300009A05Rik (ENSMSIG00000002599) #26	Map2k5 (ENSMSIG00000002321) #27	Skor1 (ENSMSIG00000002179) #28	Pias1 (ENSMSIG00000002027) #29	ENSMSIG00000001996 #30	Cln6 (ENSMSIG00000001974) #31	Fem1b (ENSMSIG00000001951) #32	Itga11 (ENSMSIG00000001884) #33	Coro2b (ENSMSIG00000001799) #34	ENSMSIG00000001693 #35
Ryukyu mouse	MODERN SPECIES	18	Dpp8 (MGP_CAROLIEiJ_G0032351)	Hacd3 (MGP_CAROLIEiJ_G0032350) #7	Ints14 (MGP_CAROLIEiJ_G0032349) #8	Slc24a1 (MGP_CAROLIEiJ_G0032348) #9	Dennd4a (MGP_CAROLIEiJ_G0032347) #10	Rab11a (MGP_CAROLIEiJ_G0032346) #12	Megf11 (MGP_CAROLIEiJ_G0032345) #13	Dis3l (MGP_CAROLIEiJ_G0032344) #14	Tipin (MGP_CAROLIEiJ_G0032343) #15	MGP_CAROLIEiJ_G0032342	Map2k1 (MGP_CAROLIEiJ_G0032341) #17	Snapc5 (MGP_CAROLIEiJ_G0032340) #18	Rpl4 (MGP_CAROLIEiJ_G0032339) #19	Zwilch (MGP_CAROLIEiJ_G0032338) #20	Lctl (MGP_CAROLIEiJ_G0032337) #21	Smad6 (MGP_CAROLIEiJ_G0032336) #22	Smad3 (MGP_CAROLIEiJ_G0032335) #23	Aagab (MGP_CAROLIEiJ_G0032334) #24	Iqch (MGP_CAROLIEiJ_G0032333) #25	2300009A05Rik (MGP_CAROLIEiJ_G0032332) #26	Map2k5 (MGP_CAROLIEiJ_G0032331) #27	Skor1 (MGP_CAROLIEiJ_G0032330) #28	Pias1 (MGP_CAROLIEiJ_G0032329) #29	Calml4 (MGP_CAROLIEiJ_G0032328) #30	Cln6 (MGP_CAROLIEiJ_G0032327) #31	Fem1b (MGP_CAROLIEiJ_G0032326) #32	Itga11 (MGP_CAROLIEiJ_G0032325) #33	Coro2b (MGP_CAROLIEiJ_G0032324) #34	Anp32a (MGP_CAROLIEiJ_G0032323) #35	Spesp1 (MGP_CAROLIEiJ_G0032322) #36	Glce (MGP_CAROLIEiJ_G0032321) #37
Shrew mouse	MODERN SPECIES	1	MGP_PahariEiJ_G0015218	Igdcc4 (MGP_PahariEiJ_G0015217)	Dpp8 (MGP_PahariEiJ_G0015216)	Hacd3 (MGP_PahariEiJ_G0015215) #7	Ints14 (MGP_PahariEiJ_G0015214) #8	Slc24a1 (MGP_PahariEiJ_G0015213) #9	Dennd4a (MGP_PahariEiJ_G0015212) #10	Rab11a (MGP_PahariEiJ_G0015211) #12	Megf11 (MGP_PahariEiJ_G0015210) #13	Dis3l (MGP_PahariEiJ_G0015209) #14	Tipin (MGP_PahariEiJ_G0015208) #15	Map2k1 (MGP_PahariEiJ_G0015207) #17	Snapc5 (MGP_PahariEiJ_G0015206) #18	Rpl4 (MGP_PahariEiJ_G0015205) #19	Zwilch (MGP_PahariEiJ_G0015204) #20	Smad6 (MGP_PahariEiJ_G0015202) #22	Smad3 (MGP_PahariEiJ_G0015201) #23	Aagab (MGP_PahariEiJ_G0015200) #24	Iqch (MGP_PahariEiJ_G0015199) #25	2300009A05Rik (MGP_PahariEiJ_G0015198) #26	Map2k5 (MGP_PahariEiJ_G0015197) #27	Skor1 (MGP_PahariEiJ_G0015196) #28	Pias1 (MGP_PahariEiJ_G0015195) #29	Calml4 (MGP_PahariEiJ_G0015194) #30	MGP_PahariEiJ_G0015193	Fem1b (MGP_PahariEiJ_G0015192) #32	Itga11 (MGP_PahariEiJ_G0015191) #33	Coro2b (MGP_PahariEiJ_G0015190) #34	Anp32a (MGP_PahariEiJ_G0015189) #35	Spesp1 (MGP_PahariEiJ_G0015188) #36	Glce (MGP_PahariEiJ_G0015187) #37
Rat	MODERN SPECIES	18	Igdcc4 (ENSRNOG00000033496)	Dpp8 (ENSRNOG00000019105)	Hacd3 (ENSRNOG00000030232) #7	Ints14 (ENSRNOG00000012469) #8	Slc24a1 (ENSRNOG00000052051) #9	Dennd4a (ENSRNOG00000011739) #10	LOC120094392 (ENSRNOG00000071140)	Rab11a (ENSRNOG00000011302) #12	Megf11 (ENSRNOG00000010634) #13	Dis3l (ENSRNOG00000010537) #14	Tipin (ENSRNOG00000043068) #15	Map2k1 (ENSRNOG00000010176) #17	Rpl4 (ENSRNOG00000009378) #19	Zwilch (ENSRNOG00000009303) #20	Lctl (ENSRNOG00000009193) #21	Smad6 (ENSRNOG00000009173) #22	Smad3 (ENSRNOG00000008620) #23	Aagab (ENSRNOG00000008424) #24	Iqch (ENSRNOG00000008353) #25	C8h15orf61 (ENSRNOG00000008340) #26	AC132740.1 (ENSRNOG00000054780)	Map2k5 (ENSRNOG00000007926) #27	Skor1 (ENSRNOG00000013959) #28	Pias1 (ENSRNOG00000034272) #29	Calml4 (ENSRNOG00000038202) #30	Cln6 (ENSRNOG00000007164) #31	Fem1b (ENSRNOG00000007077) #32	Itga11 (ENSRNOG00000006723) #33	Coro2b (ENSRNOG00000015257) #34	Anp32a (ENSRNOG00000014846) #35	Spesp1 (ENSRNOG00000025359) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	955	Igdcc4 (ENSNGAG00000022064)	Dpp8 (ENSNGAG00000019579)	Hacd3 (ENSNGAG00000016924) #7	Ints14 (ENSNGAG00000007105) #8	Slc24a1 (ENSNGAG00000010674) #9	ENSNGAG00000022619 #10	Rab11a (ENSNGAG00000013726) #12	Megf11 (ENSNGAG00000011352) #13	Dis3l (ENSNGAG00000017008) #14	Tipin (ENSNGAG00000018237) #15	Map2k1 (ENSNGAG00000006894) #17	Snapc5 (ENSNGAG00000006133) #18	ENSNGAG00000006653 #19	Zwilch (ENSNGAG00000016626) #20	Lctl (ENSNGAG00000012911) #21	Smad6 (ENSNGAG00000021223) #22	ENSNGAG00000022756	Smad3 (ENSNGAG00000023535) #23	ENSNGAG00000010708 #24	Iqch (ENSNGAG00000019505) #25	2300009A05Rik (ENSNGAG00000004715) #26	Map2k5 (ENSNGAG00000011076) #27	Skor1 (ENSNGAG00000020060) #28	Pias1 (ENSNGAG00000022735) #29	Calml4 (ENSNGAG00000016088) #30	Cln6 (ENSNGAG00000023832) #31	ENSNGAG00000021620 #32	Itga11 (ENSNGAG00000024101) #33	Coro2b (ENSNGAG00000024331) #34	ENSNGAG00000017524 #35	ENSNGAG00000005322 #35
Lesser Egyptian jerboa	MODERN SPECIES	92	Dpp8 (ENSJJAG00000018252)	Hacd3 (ENSJJAG00000016608) #7	Ints14 (ENSJJAG00000005359) #8	Slc24a1 (ENSJJAG00000009344) #9	ENSJJAG00000012113 #10	ENSJJAG00000015445 #12	Megf11 (ENSJJAG00000023890) #13	ENSJJAG00000019234	Dis3l (ENSJJAG00000016147) #14	Tipin (ENSJJAG00000017947) #15	Map2k1 (ENSJJAG00000021452) #17	Snapc5 (ENSJJAG00000022013) #18	ENSJJAG00000013677 #19	Zwilch (ENSJJAG00000010189) #20	Lctl (ENSJJAG00000013579) #21	Smad6 (ENSJJAG00000019623) #22	Smad3 (ENSJJAG00000021414) #23	ENSJJAG00000018312 #24	Iqch (ENSJJAG00000024416) #25	2300009A05Rik (ENSJJAG00000019436) #26	Map2k5 (ENSJJAG00000024208) #27	Skor1 (ENSJJAG00000003624) #28	ENSJJAG00000019728 #29	Calml4 (ENSJJAG00000014113) #30	Cln6 (ENSJJAG00000024405) #31	Fem1b (ENSJJAG00000018686) #32	Itga11 (ENSJJAG00000007244) #33	Coro2b (ENSJJAG00000003058) #34	Anp32a (ENSJJAG00000019278) #35
Kangaroo rat	MODERN SPECIES	330	Dpp8 (ENSDORG00000009050)	Hacd3 (ENSDORG00000009307) #7	Ints14 (ENSDORG00000009309) #8	Slc24a1 (ENSDORG00000007185) #9	Dennd4a (ENSDORG00000002146) #10	ENSDORG00000028034 #12	ENSDORG00000026125	Megf11 (ENSDORG00000001008) #13	Dis3l (ENSDORG00000014909) #14	Tipin (ENSDORG00000028988) #15	Map2k1 (ENSDORG00000001301) #17	Snapc5 (ENSDORG00000030051) #18	Rpl4 (ENSDORG00000016287) #19	Zwilch (ENSDORG00000016288) #20	Lctl (ENSDORG00000016291) #21	Smad6 (ENSDORG00000028234) #22	ENSDORG00000026894	Smad3 (ENSDORG00000029949) #23	ENSDORG00000026611 #24	Iqch (ENSDORG00000006468) #25	2300009A05Rik (ENSDORG00000028687) #26	Map2k5 (ENSDORG00000005673) #27	Skor1 (ENSDORG00000005677) #28
Lagomorpha	ANCESTRAL SPECIES	7	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145 #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00950000183167.a.b.a	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000154905	ENSGT00390000014038	ENSGT00940000159572	ENSGT00390000008859.b.d.j
Pika	MODERN SPECIES	1524															IQCH (ENSOPRG00000014936) #25	SMAD6 (ENSOPRG00000014974) #22	SMAD3 (ENSOPRG00000014996) #23	AAGAB (ENSOPRG00000015012) #24
Rabbit	MODERN SPECIES	8	DPP8 (ENSOCUG00000011751)	HACD3 (ENSOCUG00000007513) #7	INTS14 (ENSOCUG00000007520) #8	ENSOCUG00000027844 #9	DENND4A (ENSOCUG00000007953) #10	RAB11A (ENSOCUG00000014755) #12	MEGF11 (ENSOCUG00000014760) #13	DIS3L (ENSOCUG00000002206) #14	TIPIN (ENSOCUG00000002212) #15	ENSOCUG00000023060	MAP2K1 (ENSOCUG00000008782) #17	SNAPC5 (ENSOCUG00000039231) #18	ENSOCUG00000008794 #19	ZWILCH (ENSOCUG00000008800) #20	LCTL (ENSOCUG00000021771) #21	ENSOCUG00000006134 #22	ENSOCUG00000014186	SMAD3 (ENSOCUG00000029601) #23	ENSOCUG00000039204	AAGAB (ENSOCUG00000006644) #24	IQCH (ENSOCUG00000006647) #25	MAP2K5 (ENSOCUG00000009024) #27	PIAS1 (ENSOCUG00000000618) #29	CLN6 (ENSOCUG00000017533) #31	FEM1B (ENSOCUG00000026586) #32	ITGA11 (ENSOCUG00000017726) #33	ENSOCUG00000036279	MYO9A (ENSOCUG00000017425)	SENP8 (ENSOCUG00000026054)	GRAMD2A (ENSOCUG00000006107)	ENSOCUG00000006119
Tree shrew	MODERN SPECIES	1810																ENSTBEG00000001301 #22
Primates	ANCESTRAL SPECIES	2	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147890	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35
Strepsirrhini	ANCESTRAL SPECIES	2	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Lemuriformes	ANCESTRAL SPECIES	8	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35	ENSGT00390000005362 #36	ENSGT00390000006043 #37
Mouse lemur	MODERN SPECIES	22	SLC24A1 (ENSMICG00000003996) #9	ENSMICG00000034025	ENSMICG00000028970	ENSMICG00000044235	DENND4A (ENSMICG00000004000) #10	RAB11A (ENSMICG00000041504) #12	ENSMICG00000035335	MEGF11 (ENSMICG00000004354) #13	DIS3L (ENSMICG00000004374) #14	TIPIN (ENSMICG00000004386) #15	MAP2K1 (ENSMICG00000004393) #17	SNAPC5 (ENSMICG00000004401) #18	RPL4 (ENSMICG00000004419) #19	ZWILCH (ENSMICG00000004429) #20	LCTL (ENSMICG00000004455) #21	SMAD6 (ENSMICG00000035205) #22	SMAD3 (ENSMICG00000006119) #23	AAGAB (ENSMICG00000044554) #24	IQCH (ENSMICG00000006127) #25	ENSMICG00000041604	ENSMICG00000005597	BLOC1S6 (ENSMICG00000005595)	SLC30A4 (ENSMICG00000005588)	C15orf48 (ENSMICG00000033332)	SPATA5L1 (ENSMICG00000035916)	GATM (ENSMICG00000005565)	ENSMICG00000032669	SLC28A2 (ENSMICG00000009242)	SHF (ENSMICG00000033037)	DUOX1 (ENSMICG00000009207)	DUOXA1 (ENSMICG00000009195)
Lemuriformes_a	ANCESTRAL SPECIES	115	ENSGT00830000128422	ENSGT00940000158581	ENSGT00390000002216	ENSGT00510000046908.a.b	ENSGT00390000000973.a.b	ENSGT00390000010318	ENSGT00500000045231	ENSGT00940000157217	ENSGT00940000160120	ENSGT00390000011904	ENSGT00940000159015	ENSGT00950000182932.B	ENSGT00390000013043	ENSGT00390000005342	ENSGT00940000157429	ENSGT00940000158146 #22	ENSGT00950000183167.a.b.a	ENSGT00940000159880
Coquerels sifaka	MODERN SPECIES	1035																SMAD6 (ENSPCOG00000005411) #22
Greater bamboo lemur	MODERN SPECIES	313																SMAD6 (ENSPSMG00000000845) #22	ENSPSMG00000000854	SMAD3 (ENSPSMG00000001058) #23	AAGAB (ENSPSMG00000001327) #24	IQCH (ENSPSMG00000001397) #25	C15orf61 (ENSPSMG00000001411) #26	MAP2K5 (ENSPSMG00000001626) #27	SKOR1 (ENSPSMG00000001884) #28	ENSPSMG00000001902	PIAS1 (ENSPSMG00000001932) #29	CALML4 (ENSPSMG00000001943) #30	CLN6 (ENSPSMG00000002045) #31	FEM1B (ENSPSMG00000002150) #32	ITGA11 (ENSPSMG00000002246) #33	CORO2B (ENSPSMG00000002320) #34	ENSPSMG00000002406 #35
Bushbaby	MODERN SPECIES	126	DPP8 (ENSOGAG00000013651)	HACD3 (ENSOGAG00000013661) #7	INTS14 (ENSOGAG00000013667) #8	SLC24A1 (ENSOGAG00000013674) #9	DENND4A (ENSOGAG00000013678) #10	RAB11A (ENSOGAG00000007642) #12	MEGF11 (ENSOGAG00000007644) #13	ENSOGAG00000034665	DIS3L (ENSOGAG00000024086) #14	ENSOGAG00000028488 #15	MAP2K1 (ENSOGAG00000015876) #17	SNAPC5 (ENSOGAG00000015881) #18	ENSOGAG00000015884 #19	ZWILCH (ENSOGAG00000015886) #20	LCTL (ENSOGAG00000015893) #21	SMAD6 (ENSOGAG00000015387) #22	ENSOGAG00000034467	ENSOGAG00000029245	SMAD3 (ENSOGAG00000014217) #23	AAGAB (ENSOGAG00000014219) #24	IQCH (ENSOGAG00000014224) #25	ENSOGAG00000028206	C15orf61 (ENSOGAG00000027440) #26	MAP2K5 (ENSOGAG00000002480) #27	SKOR1 (ENSOGAG00000025983) #28	PIAS1 (ENSOGAG00000014134) #29	CALML4 (ENSOGAG00000014140) #30	CLN6 (ENSOGAG00000014142) #31	FEM1B (ENSOGAG00000014143) #32	ITGA11 (ENSOGAG00000014144) #33	CORO2B (ENSOGAG00000026008) #34
Haplorrhini	ANCESTRAL SPECIES	17	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764 #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147890	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b #35
Simiiformes	ANCESTRAL SPECIES	2	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35
Platyrrhini	ANCESTRAL SPECIES	27	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a.a #15	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000011417.l.b
Mas night monkey	MODERN SPECIES	1197									DMAC1 (ENSANAG00000029014)	ENSANAG00000033377	KDM4C (ENSANAG00000024798)	GLDC (ENSANAG00000034753)	UHRF2 (ENSANAG00000025453)	ENSANAG00000028396	ENSANAG00000024963	SMAD6 (ENSANAG00000020717) #22	SMAD3 (ENSANAG00000001462) #23	ENSANAG00000031752	AAGAB (ENSANAG00000038049) #24	ENSANAG00000037777	IQCH (ENSANAG00000037205) #25	C15orf61 (ENSANAG00000019347) #26	ENSANAG00000033304	MAP2K5 (ENSANAG00000026610) #27	SKOR1 (ENSANAG00000026767) #28	PIAS1 (ENSANAG00000023771) #29	CALML4 (ENSANAG00000036088) #30	ENSANAG00000035306	ENSANAG00000022199	CLN6 (ENSANAG00000031462) #31	FEM1B (ENSANAG00000036003) #32
Cebidae	ANCESTRAL SPECIES	29	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00940000170330	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000005362 #36
Marmoset	MODERN SPECIES	1	DPP8 (ENSCJAG00000006987)	HACD3 (ENSCJAG00000007084) #7	INTS14 (ENSCJAG00000007118) #8	SLC24A1 (ENSCJAG00000007180) #9	DENND4A (ENSCJAG00000007209) #10	RAB11A (ENSCJAG00000042037) #12	ENSCJAG00000083582	MEGF11 (ENSCJAG00000007353) #13	DIS3L (ENSCJAG00000007411) #14	ENSCJAG00000085355	MAP2K1 (ENSCJAG00000007460) #17	SNAPC5 (ENSCJAG00000070895) #18	ENSCJAG00000007491 #19	ZWILCH (ENSCJAG00000007524) #20	LCTL (ENSCJAG00000007558) #21	SMAD6 (ENSCJAG00000044644) #22	SMAD3 (ENSCJAG00000002088) #23	AAGAB (ENSCJAG00000002113) #24	IQCH (ENSCJAG00000002130) #25	ENSCJAG00000051609	ENSCJAG00000073121	C15orf61 (ENSCJAG00000054412) #26	MAP2K5 (ENSCJAG00000002156) #27	SKOR1 (ENSCJAG00000002196) #28	PIAS1 (ENSCJAG00000002224) #29	CALML4 (ENSCJAG00000002243) #30	ENSCJAG00000002250 #31	ENSCJAG00000074396	FEM1B (ENSCJAG00000002264) #32	ITGA11 (ENSCJAG00000002269) #33	CORO2B (ENSCJAG00000002319) #34
Cebidae_a	ANCESTRAL SPECIES	39	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00940000153487.b.b #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.tb #35	ENSGT01020000230346.C.c.b.a.b.a.b
Capuchin	MODERN SPECIES	248	TFAP2B (ENSCCAG00000036297)	TFAP2D (ENSCCAG00000027869)	DEFB110 (ENSCCAG00000030485)	DEFB113 (ENSCCAG00000014271)	DEFB114 (ENSCCAG00000027397)	CRISP1 (ENSCCAG00000024689)	PGK2 (ENSCCAG00000004646)	CRISP3 (ENSCCAG00000027207)	CRISP2 (ENSCCAG00000035454)	RHAG (ENSCCAG00000027136)	MAP2K1 (ENSCCAG00000024279) #17	SNAPC5 (ENSCCAG00000020529) #18	ENSCCAG00000022533 #19	ZWILCH (ENSCCAG00000027333) #20	LCTL (ENSCCAG00000000633) #21	SMAD6 (ENSCCAG00000026913) #22	SMAD3 (ENSCCAG00000020767) #23	AAGAB (ENSCCAG00000024283) #24
Bolivian squirrel monkey	MODERN SPECIES	76										MAP2K1 (ENSSBOG00000023083) #17	SNAPC5 (ENSSBOG00000028815) #18	ENSSBOG00000015863 #19	ZWILCH (ENSSBOG00000033149) #20	ENSSBOG00000031231	LCTL (ENSSBOG00000023227) #21	ENSSBOG00000022363 #22	SMAD3 (ENSSBOG00000020894) #23	AAGAB (ENSSBOG00000035741) #24	IQCH (ENSSBOG00000024935) #25	C15orf61 (ENSSBOG00000022188) #26	MAP2K5 (ENSSBOG00000028179) #27	SKOR1 (ENSSBOG00000031705) #28	ENSSBOG00000032111	PIAS1 (ENSSBOG00000030212) #29	CALML4 (ENSSBOG00000031073) #30	CLN6 (ENSSBOG00000035779) #31	FEM1B (ENSSBOG00000030419) #32	ITGA11 (ENSSBOG00000030635) #33	CORO2B (ENSSBOG00000019665) #34	ANP32A (ENSSBOG00000030699) #35	ENSSBOG00000020197
Catarrhini	ANCESTRAL SPECIES	20	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35
Cercopithecidae	ANCESTRAL SPECIES	21	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000011417.l
Cercopithecinae	ANCESTRAL SPECIES	2	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000011417.l
Cercopithecinae_a	ANCESTRAL SPECIES	1	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000005362 #36
Macaca	ANCESTRAL SPECIES	1	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000011417.l
Pig-tailed macaque	MODERN SPECIES	77	DPP8 (ENSMNEG00000033598)	HACD3 (ENSMNEG00000037877) #7	INTS14 (ENSMNEG00000039516) #8	SLC24A1 (ENSMNEG00000041188) #9	DENND4A (ENSMNEG00000031159) #10	RAB11A (ENSMNEG00000043040) #12	MEGF11 (ENSMNEG00000028540) #13	DIS3L (ENSMNEG00000035066) #14	TIPIN (ENSMNEG00000031947) #15	MAP2K1 (ENSMNEG00000027299) #17	SNAPC5 (ENSMNEG00000032504) #18	ENSMNEG00000027886 #19	ZWILCH (ENSMNEG00000034955) #20	LCTL (ENSMNEG00000002923) #21	ENSMNEG00000031888	SMAD6 (ENSMNEG00000034598) #22	ENSMNEG00000032567	ENSMNEG00000030486	SMAD3 (ENSMNEG00000033094) #23	AAGAB (ENSMNEG00000040056) #24	IQCH (ENSMNEG00000034386) #25	C15orf61 (ENSMNEG00000034192) #26	MAP2K5 (ENSMNEG00000043681) #27	SKOR1 (ENSMNEG00000032875) #28	PIAS1 (ENSMNEG00000030278) #29	CALML4 (ENSMNEG00000033193) #30	CLN6 (ENSMNEG00000034743) #31	FEM1B (ENSMNEG00000033491) #32	ITGA11 (ENSMNEG00000031314) #33	CORO2B (ENSMNEG00000028626) #34	ANP32A (ENSMNEG00000043179) #35
Macaca_a	ANCESTRAL SPECIES	2	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000005362 #36
Rhesus	MODERN SPECIES	17	DPP8 (ENSMMUG00000015447)	HACD3 (ENSMMUG00000015450) #7	INTS14 (ENSMMUG00000008095) #8	SLC24A1 (ENSMMUG00000022059) #9	DENND4A (ENSMMUG00000022056) #10	RAB11A (ENSMMUG00000008006) #12	MEGF11 (ENSMMUG00000008007) #13	DIS3L (ENSMMUG00000003693) #14	TIPIN (ENSMMUG00000003695) #15	MAP2K1 (ENSMMUG00000016840) #17	SNAPC5 (ENSMMUG00000060148) #18	RPL4 (ENSMMUG00000016844) #19	ZWILCH (ENSMMUG00000029588) #20	LCTL (ENSMMUG00000017447) #21	ENSMMUG00000063378	SMAD6 (ENSMMUG00000019018) #22	ENSMMUG00000057696	SMAD3 (ENSMMUG00000015455) #23	ENSMMUG00000051534	AAGAB (ENSMMUG00000041415) #24	IQCH (ENSMMUG00000015458) #25	C7H15orf61 (ENSMMUG00000060549) #26	MAP2K5 (ENSMMUG00000014482) #27	SKOR1 (ENSMMUG00000014485) #28	PIAS1 (ENSMMUG00000011699) #29	CLN6 (ENSMMUG00000011703) #31	FEM1B (ENSMMUG00000008311) #32	ITGA11 (ENSMMUG00000004026) #33	CORO2B (ENSMMUG00000006356) #34	ANP32A (ENSMMUG00000022717) #35	ENSMMUG00000064021
Cercopithecinae_b	ANCESTRAL SPECIES	31	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000005362 #36
Cercopithecinae_d	ANCESTRAL SPECIES	37	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000005362 #36
Sooty mangabey	MODERN SPECIES	336	DPP8 (ENSCATG00000037927)	HACD3 (ENSCATG00000030252) #7	INTS14 (ENSCATG00000039488) #8	SLC24A1 (ENSCATG00000034684) #9	DENND4A (ENSCATG00000030001) #10	RAB11A (ENSCATG00000034739) #12	MEGF11 (ENSCATG00000032543) #13	DIS3L (ENSCATG00000044661) #14	TIPIN (ENSCATG00000040328) #15	MAP2K1 (ENSCATG00000038127) #17	SNAPC5 (ENSCATG00000029571) #18	ENSCATG00000031544 #19	ZWILCH (ENSCATG00000036836) #20	LCTL (ENSCATG00000033622) #21	ENSCATG00000019079	SMAD6 (ENSCATG00000002013) #22	ENSCATG00000035445	ENSCATG00000000879	SMAD3 (ENSCATG00000009733) #23	AAGAB (ENSCATG00000043588) #24	IQCH (ENSCATG00000042766) #25	C15orf61 (ENSCATG00000012736) #26	MAP2K5 (ENSCATG00000040709) #27	SKOR1 (ENSCATG00000011653) #28	PIAS1 (ENSCATG00000010291) #29	CALML4 (ENSCATG00000040034) #30	CLN6 (ENSCATG00000003907) #31	FEM1B (ENSCATG00000044684) #32	ITGA11 (ENSCATG00000030599) #33	CORO2B (ENSCATG00000040950) #34	ENSCATG00000024063
Olive baboon	MODERN SPECIES	17	HACD3 (ENSPANG00000016698) #7	INTS14 (ENSPANG00000016699) #8	SLC24A1 (ENSPANG00000016700) #9	DENND4A (ENSPANG00000016685) #10	RAB11A (ENSPANG00000016687) #12	MEGF11 (ENSPANG00000016670) #13	ENSPANG00000024144	ENSPANG00000046531	DIS3L (ENSPANG00000016671) #14	TIPIN (ENSPANG00000016672) #15	MAP2K1 (ENSPANG00000016664) #17	SNAPC5 (ENSPANG00000016665) #18	ENSPANG00000016666 #19	ZWILCH (ENSPANG00000016646) #20	LCTL (ENSPANG00000016647) #21	SMAD6 (ENSPANG00000016648) #22	ENSPANG00000016626	SMAD3 (ENSPANG00000016627) #23	AAGAB (ENSPANG00000016628) #24	IQCH (ENSPANG00000016625) #25	C15orf61 (ENSPANG00000016591) #26	MAP2K5 (ENSPANG00000016592) #27	SKOR1 (ENSPANG00000016593) #28	ENSPANG00000043681	PIAS1 (ENSPANG00000016583) #29	CALML4 (ENSPANG00000016584) #30	CLN6 (ENSPANG00000016585) #31	ENSPANG00000037059	FEM1B (ENSPANG00000016581) #32	ITGA11 (ENSPANG00000016582) #33	CORO2B (ENSPANG00000016540) #34
Vervet Monkey	MODERN SPECIES	18	IGDCC4 (ENSCSAG00000012938)	DPP8 (ENSCSAG00000012960)	HACD3 (ENSCSAG00000012971) #7	INTS14 (ENSCSAG00000012981) #8	SLC24A1 (ENSCSAG00000013003) #9	DENND4A (ENSCSAG00000013032) #10	RAB11A (ENSCSAG00000013038) #12	MEGF11 (ENSCSAG00000013112) #13	DIS3L (ENSCSAG00000013140) #14	TIPIN (ENSCSAG00000013176) #15	MAP2K1 (ENSCSAG00000013191) #17	SNAPC5 (ENSCSAG00000013199) #18	ENSCSAG00000013205 #19	ZWILCH (ENSCSAG00000013218) #20	LCTL (ENSCSAG00000013237) #21	SMAD6 (ENSCSAG00000013248) #22	ENSCSAG00000013271	ENSCSAG00000019736	SMAD3 (ENSCSAG00000013275) #23	AAGAB (ENSCSAG00000013281) #24	IQCH (ENSCSAG00000013352) #25	C15orf61 (ENSCSAG00000013380) #26	MAP2K5 (ENSCSAG00000013397) #27	SKOR1 (ENSCSAG00000013424) #28	PIAS1 (ENSCSAG00000013455) #29	CALML4 (ENSCSAG00000013468) #30	CLN6 (ENSCSAG00000013477) #31	ENSCSAG00000013485	ITGA11 (ENSCSAG00000013505) #33	CORO2B (ENSCSAG00000013518) #34	ANP32A (ENSCSAG00000013528) #35
Rhinopithecus	ANCESTRAL SPECIES	49	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.a.a #19	ENSGT00390000013696 #20	ENSGT00910000147890	ENSGT00940000157369 #21	ENSGT00910000147041	ENSGT00940000158146 #22	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35	ENSGT00390000005362 #36
Black snub-nosed monkey	MODERN SPECIES	1519	HACD3 (ENSRBIG00000040553) #7	INTS14 (ENSRBIG00000037004) #8	SLC24A1 (ENSRBIG00000029938) #9	DENND4A (ENSRBIG00000043812) #10	RAB11A (ENSRBIG00000035649) #12	MEGF11 (ENSRBIG00000032238) #13	DIS3L (ENSRBIG00000029360) #14	TIPIN (ENSRBIG00000035207) #15	MAP2K1 (ENSRBIG00000031516) #17	SNAPC5 (ENSRBIG00000033556) #18	ENSRBIG00000043139 #19	ZWILCH (ENSRBIG00000043121) #20	ENSRBIG00000038789	LCTL (ENSRBIG00000034724) #21	ENSRBIG00000044058	SMAD6 (ENSRBIG00000039005) #22	SMAD3 (ENSRBIG00000026650) #23	AAGAB (ENSRBIG00000027896) #24	IQCH (ENSRBIG00000037509) #25	C15orf61 (ENSRBIG00000041044) #26	MAP2K5 (ENSRBIG00000042741) #27	SKOR1 (ENSRBIG00000027225) #28	PIAS1 (ENSRBIG00000035465) #29	CALML4 (ENSRBIG00000022837) #30	CLN6 (ENSRBIG00000028123) #31	FEM1B (ENSRBIG00000029847) #32	ITGA11 (ENSRBIG00000032002) #33	CORO2B (ENSRBIG00000035447) #34	ANP32A (ENSRBIG00000032599) #35	SPESP1 (ENSRBIG00000038257) #36	NOX5 (ENSRBIG00000038740)
Golden snub-nosed monkey	MODERN SPECIES	1106					RAB11A (ENSRROG00000035305) #12	MEGF11 (ENSRROG00000025747) #13	DIS3L (ENSRROG00000038323) #14	TIPIN (ENSRROG00000004107) #15	MAP2K1 (ENSRROG00000034405) #17	SNAPC5 (ENSRROG00000042536) #18	ENSRROG00000036201 #19	ZWILCH (ENSRROG00000042656) #20	LCTL (ENSRROG00000040652) #21	ENSRROG00000034499	ENSRROG00000009183	ENSRROG00000043245 #22	ENSRROG00000012076	ENSRROG00000003570	SMAD3 (ENSRROG00000024517) #23	AAGAB (ENSRROG00000042217) #24	IQCH (ENSRROG00000023549) #25	C15orf61 (ENSRROG00000026466) #26	MAP2K5 (ENSRROG00000043911) #27	ENSRROG00000000680	SKOR1 (ENSRROG00000040038) #28	PIAS1 (ENSRROG00000029180) #29	CALML4 (ENSRROG00000045323) #30	CLN6 (ENSRROG00000033033) #31	FEM1B (ENSRROG00000030899) #32	ITGA11 (ENSRROG00000032503) #33	CORO2B (ENSRROG00000043899) #34
Hominoidea	ANCESTRAL SPECIES	20	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.b #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35
Gibbon	MODERN SPECIES	21	IGDCC4 (ENSNLEG00000012668)	DPP8 (ENSNLEG00000012689)	HACD3 (ENSNLEG00000012725) #7	INTS14 (ENSNLEG00000012745) #8	ENSNLEG00000012767 #9	DENND4A (ENSNLEG00000012772) #10	RAB11A (ENSNLEG00000012853) #12	MEGF11 (ENSNLEG00000012863) #13	DIS3L (ENSNLEG00000012891) #14	TIPIN (ENSNLEG00000012909) #15	MAP2K1 (ENSNLEG00000012913) #17	SNAPC5 (ENSNLEG00000033124) #18	ENSNLEG00000012938 #19	ZWILCH (ENSNLEG00000012950) #20	LCTL (ENSNLEG00000012956) #21	SMAD6 (ENSNLEG00000032864) #22	ENSNLEG00000028836	SMAD3 (ENSNLEG00000012983) #23	AAGAB (ENSNLEG00000013006) #24	IQCH (ENSNLEG00000013025) #25	C15orf61 (ENSNLEG00000013065) #26	MAP2K5 (ENSNLEG00000013066) #27	ENSNLEG00000032785	SKOR1 (ENSNLEG00000013091) #28	ENSNLEG00000031759	PIAS1 (ENSNLEG00000013103) #29	ENSNLEG00000013164 #30	CLN6 (ENSNLEG00000013178) #31	FEM1B (ENSNLEG00000013213) #32	ITGA11 (ENSNLEG00000013220) #33	CORO2B (ENSNLEG00000013333) #34
Hominidae	ANCESTRAL SPECIES	22	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.b #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34	ENSGT00950000182907.a.b.b.b.ub #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	22	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.b.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00910000147041	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34
Homo/Pan group	ANCESTRAL SPECIES	21	ENSGT00940000159637	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.b.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00910000147041	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34
Pan	ANCESTRAL SPECIES	20	ENSGT00940000160717	ENSGT00530000062962.b.a #7	ENSGT00390000009486 #8	ENSGT01030000234532.B.e.b #9	ENSGT00940000155836.B #10	ENSGT00940000154914 #12	ENSGT00940000155333.B #13	ENSGT00530000063106.B #14	ENSGT00390000005764.g.a #15	ENSGT00510000046986.m.a	ENSGT00940000153487.b.b.i.a #17	ENSGT00390000010331 #18	ENSGT00390000018145.cb.a.b.a.a #19	ENSGT00390000013696 #20	ENSGT00940000157369 #21	ENSGT00940000158146 #22	ENSGT00910000147041	ENSGT00860000136046	ENSGT00940000153499.b.b #23	ENSGT00390000007218 #24	ENSGT00390000008908 #25	ENSGT00390000015942 #26	ENSGT00910000146962	ENSGT00940000157505 #27	ENSGT00940000158440 #28	ENSGT01030000234539.a.a.b.a.b #29	ENSGT00940000157859 #30	ENSGT00400000022240 #31	ENSGT00940000161115 #32	ENSGT00940000155465 #33	ENSGT00940000158689 #34
Chimpanzee	MODERN SPECIES	6	HACD3 (ENSPTRG00000007183) #7	INTS14 (ENSPTRG00000007184) #8	SLC24A1 (ENSPTRG00000007185) #9	DENND4A (ENSPTRG00000007186) #10	RAB11A (ENSPTRG00000044358) #12	MEGF11 (ENSPTRG00000007189) #13	DIS3L (ENSPTRG00000007191) #14	TIPIN (ENSPTRG00000007192) #15	ENSPTRG00000051889	MAP2K1 (ENSPTRG00000007193) #17	ENSPTRG00000049603	SNAPC5 (ENSPTRG00000007194) #18	RPL4 (ENSPTRG00000007195) #19	ZWILCH (ENSPTRG00000007196) #20	LCTL (ENSPTRG00000007197) #21	SMAD6 (ENSPTRG00000007198) #22	ENSPTRG00000044014	ENSPTRG00000047146	SMAD3 (ENSPTRG00000007199) #23	AAGAB (ENSPTRG00000007202) #24	IQCH (ENSPTRG00000007205) #25	C15H15orf61 (ENSPTRG00000030250) #26	MAP2K5 (ENSPTRG00000007207) #27	ENSPTRG00000048990	SKOR1 (ENSPTRG00000007209) #28	PIAS1 (ENSPTRG00000007210) #29	CALML4 (ENSPTRG00000007211) #30	CLN6 (ENSPTRG00000007212) #31	FEM1B (ENSPTRG00000007214) #32	ITGA11 (ENSPTRG00000007215) #33	CORO2B (ENSPTRG00000007218) #34
Bonobo	MODERN SPECIES	6	INTS14 (ENSPPAG00000030391) #8	SLC24A1 (ENSPPAG00000042941) #9	DENND4A (ENSPPAG00000022752) #10	RAB11A (ENSPPAG00000030195) #12	MEGF11 (ENSPPAG00000043580) #13	DIS3L (ENSPPAG00000019888) #14	TIPIN (ENSPPAG00000033427) #15	ENSPPAG00000041842	ENSPPAG00000038145	MAP2K1 (ENSPPAG00000028577) #17	ENSPPAG00000033063	SNAPC5 (ENSPPAG00000041196) #18	ENSPPAG00000035309 #19	ZWILCH (ENSPPAG00000033861) #20	LCTL (ENSPPAG00000040836) #21	SMAD6 (ENSPPAG00000027722) #22	ENSPPAG00000036915	ENSPPAG00000020485	SMAD3 (ENSPPAG00000033769) #23	AAGAB (ENSPPAG00000041055) #24	IQCH (ENSPPAG00000042974) #25	C15orf61 (ENSPPAG00000026999) #26	MAP2K5 (ENSPPAG00000036945) #27	ENSPPAG00000033373	ENSPPAG00000036055 #28	PIAS1 (ENSPPAG00000041443) #29	ENSPPAG00000033363 #30	CLN6 (ENSPPAG00000030498) #31	FEM1B (ENSPPAG00000030523) #32	ITGA11 (ENSPPAG00000030683) #33	CORO2B (ENSPPAG00000030458) #34
Human	MODERN SPECIES	6	IGDCC4 (ENSG00000103742)	DPP8 (ENSG00000074603)	HACD3 (ENSG00000074696) #7	INTS14 (ENSG00000138614) #8	SLC24A1 (ENSG00000074621) #9	DENND4A (ENSG00000174485) #10	RAB11A (ENSG00000103769) #12	MEGF11 (ENSG00000157890) #13	DIS3L (ENSG00000166938) #14	TIPIN (ENSG00000075131) #15	MAP2K1 (ENSG00000169032) #17	SNAPC5 (ENSG00000174446) #18	RPL4 (ENSG00000174444) #19	ZWILCH (ENSG00000174442) #20	LCTL (ENSG00000188501) #21	SMAD6 (ENSG00000137834) #22	SMAD3 (ENSG00000166949) #23	AAGAB (ENSG00000103591) #24	IQCH (ENSG00000103599) #25	C15orf61 (ENSG00000189227) #26	MAP2K5 (ENSG00000137764) #27	SKOR1 (ENSG00000188779) #28	PIAS1 (ENSG00000033800) #29	ENSG00000260007	CALML4 (ENSG00000129007) #30	CLN6 (ENSG00000128973) #31	FEM1B (ENSG00000169018) #32	ITGA11 (ENSG00000137809) #33	CORO2B (ENSG00000103647) #34	ANP32A (ENSG00000140350) #35	SPESP1 (ENSG00000258484) #36
Gorilla	MODERN SPECIES	6	INTS14 (ENSGGOG00000003838) #8	SLC24A1 (ENSGGOG00000016389) #9	DENND4A (ENSGGOG00000014870) #10	ENSGGOG00000022841	RAB11A (ENSGGOG00000014252) #12	MEGF11 (ENSGGOG00000000293) #13	DIS3L (ENSGGOG00000001549) #14	TIPIN (ENSGGOG00000000061) #15	ENSGGOG00000024529	MAP2K1 (ENSGGOG00000003687) #17	ENSGGOG00000042752	SNAPC5 (ENSGGOG00000003693) #18	ENSGGOG00000003695 #19	ZWILCH (ENSGGOG00000003703) #20	LCTL (ENSGGOG00000006350) #21	SMAD6 (ENSGGOG00000013002) #22	ENSGGOG00000038329	ENSGGOG00000012045	ENSGGOG00000004714 #24	IQCH (ENSGGOG00000004722) #25	C15orf61 (ENSGGOG00000004732) #26	MAP2K5 (ENSGGOG00000004734) #27	ENSGGOG00000042211	ENSGGOG00000027762	ENSGGOG00000004743 #28	PIAS1 (ENSGGOG00000016852) #29	ENSGGOG00000040187 #30	ENSGGOG00000007834 #30	CLN6 (ENSGGOG00000007840) #31	FEM1B (ENSGGOG00000028408) #32	ITGA11 (ENSGGOG00000013093) #33
Orangutan	MODERN SPECIES	6	DPP8 (ENSPPYG00000006568)	HACD3 (ENSPPYG00000006569) #7	INTS14 (ENSPPYG00000006570) #8	SLC24A1 (ENSPPYG00000006571) #9	DENND4A (ENSPPYG00000006572) #10	RAB11A (ENSPPYG00000006573) #12	MEGF11 (ENSPPYG00000039385) #13	DIS3L (ENSPPYG00000006575) #14	TIPIN (ENSPPYG00000031745) #15	MAP2K1 (ENSPPYG00000006576) #17	ENSPPYG00000032290	SNAPC5 (ENSPPYG00000040277) #18	RPL4 (ENSPPYG00000006578) #19	ZWILCH (ENSPPYG00000006579) #20	LCTL (ENSPPYG00000006580) #21	ENSPPYG00000006581 #22	ENSPPYG00000006582	SMAD3 (ENSPPYG00000006583) #23	AAGAB (ENSPPYG00000006584) #24	IQCH (ENSPPYG00000006585) #25	C15orf61 (ENSPPYG00000006586) #26	MAP2K5 (ENSPPYG00000006587) #27	SKOR1 (ENSPPYG00000006588) #28	PIAS1 (ENSPPYG00000006589) #29	ENSPPYG00000006590 #30	CLN6 (ENSPPYG00000006591) #31	FEM1B (ENSPPYG00000032577) #32	ITGA11 (ENSPPYG00000006593) #33	CORO2B (ENSPPYG00000006594) #34	ENSPPYG00000006595 #35	SPESP1 (ENSPPYG00000029816) #36