Euteleostomi ANCESTRAL SPECIES 6 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Sarcopterygii ANCESTRAL SPECIES 9 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Tetrapoda ANCESTRAL SPECIES 11 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Amniota ANCESTRAL SPECIES 15 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Mammalia ANCESTRAL SPECIES 28 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Theria ANCESTRAL SPECIES 22 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Eutheria ANCESTRAL SPECIES 8 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Boreoeutheria ANCESTRAL SPECIES 3 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00960000188521 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Euarchontoglires ANCESTRAL SPECIES 3 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Primates ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Strepsirrhini ANCESTRAL SPECIES 2 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Lemuriformes ANCESTRAL SPECIES 8 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Mouse lemur MODERN SPECIES 22 SLC24A1 (ENSMICG00000003996) #7 ENSMICG00000034025 #8 ENSMICG00000028970 #9 ENSMICG00000044235 #10 DENND4A (ENSMICG00000004000) #11 RAB11A (ENSMICG00000041504) #12 ENSMICG00000035335 #13 MEGF11 (ENSMICG00000004354) #14 DIS3L (ENSMICG00000004374) #15 TIPIN (ENSMICG00000004386) #16 MAP2K1 (ENSMICG00000004393) #17 SNAPC5 (ENSMICG00000004401) #18 RPL4 (ENSMICG00000004419) #19 ZWILCH (ENSMICG00000004429) #20 LCTL (ENSMICG00000004455) #21 SMAD6 (ENSMICG00000035205) #22 SMAD3 (ENSMICG00000006119) #23 AAGAB (ENSMICG00000044554) #24 IQCH (ENSMICG00000006127) #25 ENSMICG00000041604 #26 ENSMICG00000005597 #27 BLOC1S6 (ENSMICG00000005595) #28 SLC30A4 (ENSMICG00000005588) #29 C15orf48 (ENSMICG00000033332) #30 SPATA5L1 (ENSMICG00000035916) #31 GATM (ENSMICG00000005565) #32 ENSMICG00000032669 #33 SLC28A2 (ENSMICG00000009242) #34 SHF (ENSMICG00000033037) #35 DUOX1 (ENSMICG00000009207) #36 DUOXA1 (ENSMICG00000009195) #37 Lemuriformes_a ANCESTRAL SPECIES 115 ENSGT00830000128422 ENSGT00940000158581 ENSGT00390000002216 ENSGT00510000046908.a.b ENSGT00390000000973.a.b ENSGT00390000010318 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000160120 ENSGT00390000011904 ENSGT00940000159015 ENSGT00950000182932.B ENSGT00390000013043 ENSGT00390000005342 ENSGT00940000157429 ENSGT00940000158146 #22 ENSGT00950000183167.a.b.a ENSGT00940000159880 Coquerels sifaka MODERN SPECIES 1035 SMAD6 (ENSPCOG00000005411) #22 Greater bamboo lemur MODERN SPECIES 313 SMAD6 (ENSPSMG00000000845) #22 ENSPSMG00000000854 SMAD3 (ENSPSMG00000001058) #23 AAGAB (ENSPSMG00000001327) #24 IQCH (ENSPSMG00000001397) #25 C15orf61 (ENSPSMG00000001411) MAP2K5 (ENSPSMG00000001626) SKOR1 (ENSPSMG00000001884) ENSPSMG00000001902 PIAS1 (ENSPSMG00000001932) CALML4 (ENSPSMG00000001943) CLN6 (ENSPSMG00000002045) FEM1B (ENSPSMG00000002150) ITGA11 (ENSPSMG00000002246) CORO2B (ENSPSMG00000002320) ENSPSMG00000002406 Bushbaby MODERN SPECIES 126 DPP8 (ENSOGAG00000013651) HACD3 (ENSOGAG00000013661) INTS14 (ENSOGAG00000013667) SLC24A1 (ENSOGAG00000013674) #7 DENND4A (ENSOGAG00000013678) #11 RAB11A (ENSOGAG00000007642) #12 MEGF11 (ENSOGAG00000007644) #14 ENSOGAG00000034665 DIS3L (ENSOGAG00000024086) #15 ENSOGAG00000028488 #16 MAP2K1 (ENSOGAG00000015876) #17 SNAPC5 (ENSOGAG00000015881) #18 ENSOGAG00000015884 ##19 ZWILCH (ENSOGAG00000015886) #20 LCTL (ENSOGAG00000015893) #21 SMAD6 (ENSOGAG00000015387) #22 ENSOGAG00000034467 ENSOGAG00000029245 SMAD3 (ENSOGAG00000014217) #23 AAGAB (ENSOGAG00000014219) #24 IQCH (ENSOGAG00000014224) #25 ENSOGAG00000028206 C15orf61 (ENSOGAG00000027440) MAP2K5 (ENSOGAG00000002480) SKOR1 (ENSOGAG00000025983) PIAS1 (ENSOGAG00000014134) CALML4 (ENSOGAG00000014140) CLN6 (ENSOGAG00000014142) FEM1B (ENSOGAG00000014143) ITGA11 (ENSOGAG00000014144) CORO2B (ENSOGAG00000026008) Haplorrhini ANCESTRAL SPECIES 17 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Simiiformes ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub Platyrrhini ANCESTRAL SPECIES 27 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a.a #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000011417.l.b Mas night monkey MODERN SPECIES 1197 DMAC1 (ENSANAG00000029014) ENSANAG00000033377 KDM4C (ENSANAG00000024798) GLDC (ENSANAG00000034753) UHRF2 (ENSANAG00000025453) ENSANAG00000028396 ENSANAG00000024963 SMAD6 (ENSANAG00000020717) #22 SMAD3 (ENSANAG00000001462) #23 ENSANAG00000031752 AAGAB (ENSANAG00000038049) #24 ENSANAG00000037777 IQCH (ENSANAG00000037205) #25 C15orf61 (ENSANAG00000019347) ENSANAG00000033304 MAP2K5 (ENSANAG00000026610) SKOR1 (ENSANAG00000026767) PIAS1 (ENSANAG00000023771) CALML4 (ENSANAG00000036088) ENSANAG00000035306 ENSANAG00000022199 CLN6 (ENSANAG00000031462) FEM1B (ENSANAG00000036003) Cebidae ANCESTRAL SPECIES 29 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00940000170330 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000005362 Marmoset MODERN SPECIES 1 DPP8 (ENSCJAG00000006987) HACD3 (ENSCJAG00000007084) INTS14 (ENSCJAG00000007118) SLC24A1 (ENSCJAG00000007180) #7 DENND4A (ENSCJAG00000007209) #11 RAB11A (ENSCJAG00000042037) #12 ENSCJAG00000083582 MEGF11 (ENSCJAG00000007353) #14 DIS3L (ENSCJAG00000007411) #15 ENSCJAG00000085355 MAP2K1 (ENSCJAG00000007460) #17 SNAPC5 (ENSCJAG00000070895) #18 ENSCJAG00000007491 #19 ZWILCH (ENSCJAG00000007524) #20 LCTL (ENSCJAG00000007558) #21 SMAD6 (ENSCJAG00000044644) #22 SMAD3 (ENSCJAG00000002088) #23 AAGAB (ENSCJAG00000002113) #24 IQCH (ENSCJAG00000002130) #25 ENSCJAG00000051609 ENSCJAG00000073121 C15orf61 (ENSCJAG00000054412) MAP2K5 (ENSCJAG00000002156) SKOR1 (ENSCJAG00000002196) PIAS1 (ENSCJAG00000002224) CALML4 (ENSCJAG00000002243) ENSCJAG00000002250 ENSCJAG00000074396 FEM1B (ENSCJAG00000002264) ITGA11 (ENSCJAG00000002269) CORO2B (ENSCJAG00000002319) Cebidae_a ANCESTRAL SPECIES 39 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.tb ENSGT01020000230346.C.c.b.a.b.a.b Capuchin MODERN SPECIES 248 TFAP2B (ENSCCAG00000036297) TFAP2D (ENSCCAG00000027869) DEFB110 (ENSCCAG00000030485) DEFB113 (ENSCCAG00000014271) DEFB114 (ENSCCAG00000027397) CRISP1 (ENSCCAG00000024689) PGK2 (ENSCCAG00000004646) CRISP3 (ENSCCAG00000027207) CRISP2 (ENSCCAG00000035454) RHAG (ENSCCAG00000027136) MAP2K1 (ENSCCAG00000024279) #17 SNAPC5 (ENSCCAG00000020529) #18 ENSCCAG00000022533 #19 ZWILCH (ENSCCAG00000027333) #20 LCTL (ENSCCAG00000000633) #21 SMAD6 (ENSCCAG00000026913) #22 SMAD3 (ENSCCAG00000020767) #23 AAGAB (ENSCCAG00000024283) #24 Bolivian squirrel monkey MODERN SPECIES 76 MAP2K1 (ENSSBOG00000023083) #17 SNAPC5 (ENSSBOG00000028815) #18 ENSSBOG00000015863 #19 ZWILCH (ENSSBOG00000033149) #20 ENSSBOG00000031231 LCTL (ENSSBOG00000023227) #21 ENSSBOG00000022363 #22 SMAD3 (ENSSBOG00000020894) #23 AAGAB (ENSSBOG00000035741) #24 IQCH (ENSSBOG00000024935) #25 C15orf61 (ENSSBOG00000022188) MAP2K5 (ENSSBOG00000028179) SKOR1 (ENSSBOG00000031705) ENSSBOG00000032111 PIAS1 (ENSSBOG00000030212) CALML4 (ENSSBOG00000031073) CLN6 (ENSSBOG00000035779) FEM1B (ENSSBOG00000030419) ITGA11 (ENSSBOG00000030635) CORO2B (ENSSBOG00000019665) ANP32A (ENSSBOG00000030699) ENSSBOG00000020197 Catarrhini ANCESTRAL SPECIES 20 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub Cercopithecidae ANCESTRAL SPECIES 21 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000011417.l Cercopithecinae ANCESTRAL SPECIES 2 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000011417.l Cercopithecinae_a ANCESTRAL SPECIES 1 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000005362 Macaca ANCESTRAL SPECIES 1 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000011417.l Pig-tailed macaque MODERN SPECIES 77 DPP8 (ENSMNEG00000033598) HACD3 (ENSMNEG00000037877) INTS14 (ENSMNEG00000039516) SLC24A1 (ENSMNEG00000041188) #7 DENND4A (ENSMNEG00000031159) #11 RAB11A (ENSMNEG00000043040) #12 MEGF11 (ENSMNEG00000028540) #14 DIS3L (ENSMNEG00000035066) #15 TIPIN (ENSMNEG00000031947) #16 MAP2K1 (ENSMNEG00000027299) #17 SNAPC5 (ENSMNEG00000032504) #18 ENSMNEG00000027886 #19 ZWILCH (ENSMNEG00000034955) #20 LCTL (ENSMNEG00000002923) #21 ENSMNEG00000031888 SMAD6 (ENSMNEG00000034598) #22 ENSMNEG00000032567 ENSMNEG00000030486 SMAD3 (ENSMNEG00000033094) #23 AAGAB (ENSMNEG00000040056) #24 IQCH (ENSMNEG00000034386) #25 C15orf61 (ENSMNEG00000034192) MAP2K5 (ENSMNEG00000043681) SKOR1 (ENSMNEG00000032875) PIAS1 (ENSMNEG00000030278) CALML4 (ENSMNEG00000033193) CLN6 (ENSMNEG00000034743) FEM1B (ENSMNEG00000033491) ITGA11 (ENSMNEG00000031314) CORO2B (ENSMNEG00000028626) ANP32A (ENSMNEG00000043179) Macaca_a ANCESTRAL SPECIES 2 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000005362 Rhesus MODERN SPECIES 17 DPP8 (ENSMMUG00000015447) HACD3 (ENSMMUG00000015450) INTS14 (ENSMMUG00000008095) SLC24A1 (ENSMMUG00000022059) #7 DENND4A (ENSMMUG00000022056) #11 RAB11A (ENSMMUG00000008006) #12 MEGF11 (ENSMMUG00000008007) #14 DIS3L (ENSMMUG00000003693) #15 TIPIN (ENSMMUG00000003695) #16 MAP2K1 (ENSMMUG00000016840) #17 SNAPC5 (ENSMMUG00000060148) #18 RPL4 (ENSMMUG00000016844) #19 ZWILCH (ENSMMUG00000029588) #20 LCTL (ENSMMUG00000017447) #21 ENSMMUG00000063378 SMAD6 (ENSMMUG00000019018) #22 ENSMMUG00000057696 SMAD3 (ENSMMUG00000015455) #23 ENSMMUG00000051534 AAGAB (ENSMMUG00000041415) #24 IQCH (ENSMMUG00000015458) #25 C7H15orf61 (ENSMMUG00000060549) MAP2K5 (ENSMMUG00000014482) SKOR1 (ENSMMUG00000014485) PIAS1 (ENSMMUG00000011699) CLN6 (ENSMMUG00000011703) FEM1B (ENSMMUG00000008311) ITGA11 (ENSMMUG00000004026) CORO2B (ENSMMUG00000006356) ANP32A (ENSMMUG00000022717) ENSMMUG00000064021 Cercopithecinae_b ANCESTRAL SPECIES 31 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000005362 Cercopithecinae_d ANCESTRAL SPECIES 37 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT01030000234570.d.b.a.a.a.b.a.b.a.c.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000005362 Sooty mangabey MODERN SPECIES 336 DPP8 (ENSCATG00000037927) HACD3 (ENSCATG00000030252) INTS14 (ENSCATG00000039488) SLC24A1 (ENSCATG00000034684) #7 DENND4A (ENSCATG00000030001) #11 RAB11A (ENSCATG00000034739) #12 MEGF11 (ENSCATG00000032543) #14 DIS3L (ENSCATG00000044661) #15 TIPIN (ENSCATG00000040328) #16 MAP2K1 (ENSCATG00000038127) #17 SNAPC5 (ENSCATG00000029571) #18 ENSCATG00000031544 ##19 ZWILCH (ENSCATG00000036836) #20 LCTL (ENSCATG00000033622) #21 ENSCATG00000019079 SMAD6 (ENSCATG00000002013) #22 ENSCATG00000035445 ENSCATG00000000879 SMAD3 (ENSCATG00000009733) #23 AAGAB (ENSCATG00000043588) #24 IQCH (ENSCATG00000042766) #25 C15orf61 (ENSCATG00000012736) MAP2K5 (ENSCATG00000040709) SKOR1 (ENSCATG00000011653) PIAS1 (ENSCATG00000010291) CALML4 (ENSCATG00000040034) CLN6 (ENSCATG00000003907) FEM1B (ENSCATG00000044684) ITGA11 (ENSCATG00000030599) CORO2B (ENSCATG00000040950) ENSCATG00000024063 Olive baboon MODERN SPECIES 17 HACD3 (ENSPANG00000016698) INTS14 (ENSPANG00000016699) SLC24A1 (ENSPANG00000016700) #7 DENND4A (ENSPANG00000016685) #11 RAB11A (ENSPANG00000016687) #12 MEGF11 (ENSPANG00000016670) #14 ENSPANG00000024144 ENSPANG00000046531 DIS3L (ENSPANG00000016671) #15 TIPIN (ENSPANG00000016672) #16 MAP2K1 (ENSPANG00000016664) #17 SNAPC5 (ENSPANG00000016665) #18 ENSPANG00000016666 #19 ZWILCH (ENSPANG00000016646) #20 LCTL (ENSPANG00000016647) #21 SMAD6 (ENSPANG00000016648) #22 ENSPANG00000016626 SMAD3 (ENSPANG00000016627) #23 AAGAB (ENSPANG00000016628) #24 IQCH (ENSPANG00000016625) #25 C15orf61 (ENSPANG00000016591) MAP2K5 (ENSPANG00000016592) SKOR1 (ENSPANG00000016593) ENSPANG00000043681 PIAS1 (ENSPANG00000016583) CALML4 (ENSPANG00000016584) CLN6 (ENSPANG00000016585) ENSPANG00000037059 FEM1B (ENSPANG00000016581) ITGA11 (ENSPANG00000016582) CORO2B (ENSPANG00000016540) Vervet Monkey MODERN SPECIES 18 IGDCC4 (ENSCSAG00000012938) DPP8 (ENSCSAG00000012960) HACD3 (ENSCSAG00000012971) INTS14 (ENSCSAG00000012981) SLC24A1 (ENSCSAG00000013003) #7 DENND4A (ENSCSAG00000013032) #11 RAB11A (ENSCSAG00000013038) #12 MEGF11 (ENSCSAG00000013112) #14 DIS3L (ENSCSAG00000013140) #15 TIPIN (ENSCSAG00000013176) #16 MAP2K1 (ENSCSAG00000013191) #17 SNAPC5 (ENSCSAG00000013199) #18 ENSCSAG00000013205 ##19 ZWILCH (ENSCSAG00000013218) #20 LCTL (ENSCSAG00000013237) #21 SMAD6 (ENSCSAG00000013248) #22 ENSCSAG00000013271 ENSCSAG00000019736 SMAD3 (ENSCSAG00000013275) #23 AAGAB (ENSCSAG00000013281) #24 IQCH (ENSCSAG00000013352) #25 C15orf61 (ENSCSAG00000013380) MAP2K5 (ENSCSAG00000013397) SKOR1 (ENSCSAG00000013424) PIAS1 (ENSCSAG00000013455) CALML4 (ENSCSAG00000013468) CLN6 (ENSCSAG00000013477) ENSCSAG00000013485 ITGA11 (ENSCSAG00000013505) CORO2B (ENSCSAG00000013518) ANP32A (ENSCSAG00000013528) Rhinopithecus ANCESTRAL SPECIES 49 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.a.a #19 ENSGT00390000013696 #20 ENSGT00910000147890 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub ENSGT00390000005362 Black snub-nosed monkey MODERN SPECIES 1519 HACD3 (ENSRBIG00000040553) INTS14 (ENSRBIG00000037004) SLC24A1 (ENSRBIG00000029938) #7 DENND4A (ENSRBIG00000043812) #11 RAB11A (ENSRBIG00000035649) #12 MEGF11 (ENSRBIG00000032238) #14 DIS3L (ENSRBIG00000029360) #15 TIPIN (ENSRBIG00000035207) #16 MAP2K1 (ENSRBIG00000031516) #17 SNAPC5 (ENSRBIG00000033556) #18 ENSRBIG00000043139 #19 ZWILCH (ENSRBIG00000043121) #20 ENSRBIG00000038789 LCTL (ENSRBIG00000034724) #21 ENSRBIG00000044058 SMAD6 (ENSRBIG00000039005) #22 SMAD3 (ENSRBIG00000026650) #23 AAGAB (ENSRBIG00000027896) #24 IQCH (ENSRBIG00000037509) #25 C15orf61 (ENSRBIG00000041044) MAP2K5 (ENSRBIG00000042741) SKOR1 (ENSRBIG00000027225) PIAS1 (ENSRBIG00000035465) CALML4 (ENSRBIG00000022837) CLN6 (ENSRBIG00000028123) FEM1B (ENSRBIG00000029847) ITGA11 (ENSRBIG00000032002) CORO2B (ENSRBIG00000035447) ANP32A (ENSRBIG00000032599) SPESP1 (ENSRBIG00000038257) NOX5 (ENSRBIG00000038740) Golden snub-nosed monkey MODERN SPECIES 1106 RAB11A (ENSRROG00000035305) #12 MEGF11 (ENSRROG00000025747) #14 DIS3L (ENSRROG00000038323) #15 TIPIN (ENSRROG00000004107) #16 MAP2K1 (ENSRROG00000034405) #17 SNAPC5 (ENSRROG00000042536) #18 ENSRROG00000036201 #19 ZWILCH (ENSRROG00000042656) #20 LCTL (ENSRROG00000040652) #21 ENSRROG00000034499 ENSRROG00000009183 ENSRROG00000043245 #22 ENSRROG00000012076 ENSRROG00000003570 SMAD3 (ENSRROG00000024517) #23 AAGAB (ENSRROG00000042217) #24 IQCH (ENSRROG00000023549) #25 C15orf61 (ENSRROG00000026466) MAP2K5 (ENSRROG00000043911) ENSRROG00000000680 SKOR1 (ENSRROG00000040038) PIAS1 (ENSRROG00000029180) CALML4 (ENSRROG00000045323) CLN6 (ENSRROG00000033033) FEM1B (ENSRROG00000030899) ITGA11 (ENSRROG00000032503) CORO2B (ENSRROG00000043899) Hominoidea ANCESTRAL SPECIES 20 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub Gibbon MODERN SPECIES 21 IGDCC4 (ENSNLEG00000012668) DPP8 (ENSNLEG00000012689) HACD3 (ENSNLEG00000012725) INTS14 (ENSNLEG00000012745) ENSNLEG00000012767 #7 DENND4A (ENSNLEG00000012772) #11 RAB11A (ENSNLEG00000012853) #12 MEGF11 (ENSNLEG00000012863) #14 DIS3L (ENSNLEG00000012891) #15 TIPIN (ENSNLEG00000012909) #16 MAP2K1 (ENSNLEG00000012913) #17 SNAPC5 (ENSNLEG00000033124) #18 ENSNLEG00000012938 #19 ZWILCH (ENSNLEG00000012950) #20 LCTL (ENSNLEG00000012956) #21 SMAD6 (ENSNLEG00000032864) #22 ENSNLEG00000028836 SMAD3 (ENSNLEG00000012983) #23 AAGAB (ENSNLEG00000013006) #24 IQCH (ENSNLEG00000013025) #25 C15orf61 (ENSNLEG00000013065) MAP2K5 (ENSNLEG00000013066) ENSNLEG00000032785 SKOR1 (ENSNLEG00000013091) ENSNLEG00000031759 PIAS1 (ENSNLEG00000013103) ENSNLEG00000013164 CLN6 (ENSNLEG00000013178) FEM1B (ENSNLEG00000013213) ITGA11 (ENSNLEG00000013220) CORO2B (ENSNLEG00000013333) Hominidae ANCESTRAL SPECIES 22 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b.ub Homo/Pan/Gorilla group ANCESTRAL SPECIES 22 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.b.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00910000147041 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Homo/Pan group ANCESTRAL SPECIES 21 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.b.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00910000147041 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Pan ANCESTRAL SPECIES 20 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.g.a #16 ENSGT00510000046986.m.a ENSGT00940000153487.b.b.i.a #17 ENSGT00390000010331 #18 ENSGT00390000018145.cb.a.b.a.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00910000147041 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Chimpanzee MODERN SPECIES 6 HACD3 (ENSPTRG00000007183) INTS14 (ENSPTRG00000007184) SLC24A1 (ENSPTRG00000007185) #7 DENND4A (ENSPTRG00000007186) #11 RAB11A (ENSPTRG00000044358) #12 MEGF11 (ENSPTRG00000007189) #14 DIS3L (ENSPTRG00000007191) #15 TIPIN (ENSPTRG00000007192) #16 ENSPTRG00000051889 MAP2K1 (ENSPTRG00000007193) #17 ENSPTRG00000049603 SNAPC5 (ENSPTRG00000007194) #18 RPL4 (ENSPTRG00000007195) #19 ZWILCH (ENSPTRG00000007196) #20 LCTL (ENSPTRG00000007197) #21 SMAD6 (ENSPTRG00000007198) #22 ENSPTRG00000044014 ENSPTRG00000047146 SMAD3 (ENSPTRG00000007199) #23 AAGAB (ENSPTRG00000007202) #24 IQCH (ENSPTRG00000007205) #25 C15H15orf61 (ENSPTRG00000030250) MAP2K5 (ENSPTRG00000007207) ENSPTRG00000048990 SKOR1 (ENSPTRG00000007209) PIAS1 (ENSPTRG00000007210) CALML4 (ENSPTRG00000007211) CLN6 (ENSPTRG00000007212) FEM1B (ENSPTRG00000007214) ITGA11 (ENSPTRG00000007215) CORO2B (ENSPTRG00000007218) Bonobo MODERN SPECIES 6 INTS14 (ENSPPAG00000030391) SLC24A1 (ENSPPAG00000042941) #7 DENND4A (ENSPPAG00000022752) #11 RAB11A (ENSPPAG00000030195) #12 MEGF11 (ENSPPAG00000043580) #14 DIS3L (ENSPPAG00000019888) #15 TIPIN (ENSPPAG00000033427) #16 ENSPPAG00000041842 ENSPPAG00000038145 MAP2K1 (ENSPPAG00000028577) #17 ENSPPAG00000033063 SNAPC5 (ENSPPAG00000041196) #18 ENSPPAG00000035309 #19 ZWILCH (ENSPPAG00000033861) #20 LCTL (ENSPPAG00000040836) #21 SMAD6 (ENSPPAG00000027722) #22 ENSPPAG00000036915 ENSPPAG00000020485 SMAD3 (ENSPPAG00000033769) #23 AAGAB (ENSPPAG00000041055) #24 IQCH (ENSPPAG00000042974) #25 C15orf61 (ENSPPAG00000026999) MAP2K5 (ENSPPAG00000036945) ENSPPAG00000033373 ENSPPAG00000036055 PIAS1 (ENSPPAG00000041443) ENSPPAG00000033363 CLN6 (ENSPPAG00000030498) FEM1B (ENSPPAG00000030523) ITGA11 (ENSPPAG00000030683) CORO2B (ENSPPAG00000030458) Human MODERN SPECIES 6 IGDCC4 (ENSG00000103742) DPP8 (ENSG00000074603) HACD3 (ENSG00000074696) INTS14 (ENSG00000138614) SLC24A1 (ENSG00000074621) #7 DENND4A (ENSG00000174485) #11 RAB11A (ENSG00000103769) #12 MEGF11 (ENSG00000157890) #14 DIS3L (ENSG00000166938) #15 TIPIN (ENSG00000075131) #16 MAP2K1 (ENSG00000169032) #17 SNAPC5 (ENSG00000174446) #18 RPL4 (ENSG00000174444) #19 ZWILCH (ENSG00000174442) #20 LCTL (ENSG00000188501) #21 SMAD6 (ENSG00000137834) #22 SMAD3 (ENSG00000166949) #23 AAGAB (ENSG00000103591) #24 IQCH (ENSG00000103599) #25 C15orf61 (ENSG00000189227) MAP2K5 (ENSG00000137764) SKOR1 (ENSG00000188779) PIAS1 (ENSG00000033800) ENSG00000260007 CALML4 (ENSG00000129007) CLN6 (ENSG00000128973) FEM1B (ENSG00000169018) ITGA11 (ENSG00000137809) CORO2B (ENSG00000103647) ANP32A (ENSG00000140350) SPESP1 (ENSG00000258484) Gorilla MODERN SPECIES 6 INTS14 (ENSGGOG00000003838) SLC24A1 (ENSGGOG00000016389) #7 DENND4A (ENSGGOG00000014870) #11 ENSGGOG00000022841 RAB11A (ENSGGOG00000014252) #12 MEGF11 (ENSGGOG00000000293) #14 DIS3L (ENSGGOG00000001549) #15 TIPIN (ENSGGOG00000000061) #16 ENSGGOG00000024529 MAP2K1 (ENSGGOG00000003687) #17 ENSGGOG00000042752 SNAPC5 (ENSGGOG00000003693) #18 ENSGGOG00000003695 #19 ZWILCH (ENSGGOG00000003703) #20 LCTL (ENSGGOG00000006350) #21 SMAD6 (ENSGGOG00000013002) #22 ENSGGOG00000038329 ENSGGOG00000012045 ENSGGOG00000004714 #24 IQCH (ENSGGOG00000004722) #25 C15orf61 (ENSGGOG00000004732) MAP2K5 (ENSGGOG00000004734) ENSGGOG00000042211 ENSGGOG00000027762 ENSGGOG00000004743 PIAS1 (ENSGGOG00000016852) ENSGGOG00000040187 ENSGGOG00000007834 CLN6 (ENSGGOG00000007840) FEM1B (ENSGGOG00000028408) ITGA11 (ENSGGOG00000013093) Orangutan MODERN SPECIES 6 DPP8 (ENSPPYG00000006568) HACD3 (ENSPPYG00000006569) INTS14 (ENSPPYG00000006570) SLC24A1 (ENSPPYG00000006571) #7 DENND4A (ENSPPYG00000006572) #11 RAB11A (ENSPPYG00000006573) #12 MEGF11 (ENSPPYG00000039385) #14 DIS3L (ENSPPYG00000006575) #15 TIPIN (ENSPPYG00000031745) #16 MAP2K1 (ENSPPYG00000006576) #17 ENSPPYG00000032290 SNAPC5 (ENSPPYG00000040277) #18 RPL4 (ENSPPYG00000006578) #19 ZWILCH (ENSPPYG00000006579) #20 LCTL (ENSPPYG00000006580) #21 ENSPPYG00000006581 #22 ENSPPYG00000006582 SMAD3 (ENSPPYG00000006583) #23 AAGAB (ENSPPYG00000006584) #24 IQCH (ENSPPYG00000006585) #25 C15orf61 (ENSPPYG00000006586) MAP2K5 (ENSPPYG00000006587) SKOR1 (ENSPPYG00000006588) PIAS1 (ENSPPYG00000006589) ENSPPYG00000006590 CLN6 (ENSPPYG00000006591) FEM1B (ENSPPYG00000032577) ITGA11 (ENSPPYG00000006593) CORO2B (ENSPPYG00000006594) ENSPPYG00000006595 SPESP1 (ENSPPYG00000029816) Euarchontoglires_A ANCESTRAL SPECIES 3 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Tree shrew MODERN SPECIES 1810 ENSTBEG00000001301 #22 Glires ANCESTRAL SPECIES 15 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Rodentia ANCESTRAL SPECIES 3 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Rodentia_B ANCESTRAL SPECIES 11 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Myomorpha ANCESTRAL SPECIES 25 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Muroidea ANCESTRAL SPECIES 23 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Muroidea_A ANCESTRAL SPECIES 6 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Cricetidae ANCESTRAL SPECIES 4 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Cricetidae_B ANCESTRAL SPECIES 24 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Northern American deer mouse MODERN SPECIES 20 Igdcc4 (ENSPEMG00000020857) Dpp8 (ENSPEMG00000024195) Hacd3 (ENSPEMG00000008076) Ints14 (ENSPEMG00000008550) Slc24a1 (ENSPEMG00000022814) #7 Dennd4a (ENSPEMG00000022452) #11 ENSPEMG00000021125 #12 Megf11 (ENSPEMG00000017797) #14 Dis3l (ENSPEMG00000001213) #15 Tipin (ENSPEMG00000002370) #16 Map2k1 (ENSPEMG00000007282) #17 Snapc5 (ENSPEMG00000007852) #18 Rpl4 (ENSPEMG00000012064) #19 Zwilch (ENSPEMG00000014485) #20 Lctl (ENSPEMG00000016229) #21 Smad6 (ENSPEMG00000017040) #22 Smad3 (ENSPEMG00000028676) #23 Aagab (ENSPEMG00000018465) #24 ENSPEMG00000028831 Iqch (ENSPEMG00000005753) #25 2300009A05Rik (ENSPEMG00000009306) Map2k5 (ENSPEMG00000010361) Skor1 (ENSPEMG00000010499) Pias1 (ENSPEMG00000012119) Calml4 (ENSPEMG00000012833) Cln6 (ENSPEMG00000030484) ENSPEMG00000000682 Fem1b (ENSPEMG00000028410) Itga11 (ENSPEMG00000014149) Coro2b (ENSPEMG00000016326) Anp32a (ENSPEMG00000017392) Prairie vole MODERN SPECIES 13 Igdcc4 (ENSMOCG00000017733) Dpp8 (ENSMOCG00000018103) Hacd3 (ENSMOCG00000004995) Ints14 (ENSMOCG00000020364) Slc24a1 (ENSMOCG00000002968) #7 Dennd4a (ENSMOCG00000008521) #11 Rab11a (ENSMOCG00000021138) #12 Megf11 (ENSMOCG00000003573) #14 Dis3l (ENSMOCG00000005278) #15 Tipin (ENSMOCG00000010343) #16 Map2k1 (ENSMOCG00000013072) #17 Snapc5 (ENSMOCG00000015348) #18 ENSMOCG00000021901 #19 Zwilch (ENSMOCG00000017159) #20 Lctl (ENSMOCG00000004744) #21 Smad6 (ENSMOCG00000014458) #22 Smad3 (ENSMOCG00000018490) #23 Aagab (ENSMOCG00000021340) #24 Iqch (ENSMOCG00000016873) #25 2300009A05Rik (ENSMOCG00000013991) Map2k5 (ENSMOCG00000022058) Skor1 (ENSMOCG00000018261) ENSMOCG00000019235 Pias1 (ENSMOCG00000022074) Calml4 (ENSMOCG00000018493) Cln6 (ENSMOCG00000021992) Fem1b (ENSMOCG00000005442) Itga11 (ENSMOCG00000003119) Coro2b (ENSMOCG00000011097) ENSMOCG00000004428 ENSMOCG00000014776 Cricetinae ANCESTRAL SPECIES 6 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.kb #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Chinese hamster chok1gshd MODERN SPECIES 284 Parp16 (ENSCGRG00001011381) Igdcc3 (ENSCGRG00001015803) Igdcc4 (ENSCGRG00001004819) Dpp8 (ENSCGRG00001024771) Hacd3 (ENSCGRG00001019214) Ints14 (ENSCGRG00001022061) Slc24a1 (ENSCGRG00001023812) #7 Dennd4a (ENSCGRG00001019979) #11 Rab11a (ENSCGRG00001023313) #12 Megf11 (ENSCGRG00001019210) #14 Dis3l (ENSCGRG00001017825) #15 Tipin (ENSCGRG00001018146) #16 Snapc5 (ENSCGRG00001013968) #18 Zwilch (ENSCGRG00001018206) #20 Lctl (ENSCGRG00001017716) #21 Smad6 (ENSCGRG00001002733) #22 Smad3 (ENSCGRG00001013999) #23 Aagab (ENSCGRG00001020082) #24 Iqch (ENSCGRG00001006084) #25 ENSCGRG00001000811 2300009A05Rik (ENSCGRG00001009275) Map2k5 (ENSCGRG00001024707) Skor1 (ENSCGRG00001000300) Pias1 (ENSCGRG00001018818) Calml4 (ENSCGRG00001023410) Cln6 (ENSCGRG00001016348) Fem1b (ENSCGRG00001018487) Itga11 (ENSCGRG00001016586) Coro2b (ENSCGRG00001025051) ENSCGRG00001022637 Spesp1 (ENSCGRG00001015906) Golden Hamster MODERN SPECIES 672 Igdcc4 (ENSMAUG00000021589) Dpp8 (ENSMAUG00000020059) Hacd3 (ENSMAUG00000004278) Ints14 (ENSMAUG00000020937) Slc24a1 (ENSMAUG00000012813) #7 Dennd4a (ENSMAUG00000018527) #11 Rab11a (ENSMAUG00000018551) #12 Megf11 (ENSMAUG00000003129) #14 Dis3l (ENSMAUG00000008265) #15 Tipin (ENSMAUG00000012421) #16 Map2k1 (ENSMAUG00000011379) #17 Snapc5 (ENSMAUG00000008645) #18 Rpl4 (ENSMAUG00000018867) #19 Zwilch (ENSMAUG00000021210) #20 Lctl (ENSMAUG00000009957) #21 Smad6 (ENSMAUG00000009859) #22 Smad3 (ENSMAUG00000022258) #23 Aagab (ENSMAUG00000005383) #24 Iqch (ENSMAUG00000004333) #25 Map2k5 (ENSMAUG00000015370) Skor1 (ENSMAUG00000020780) Pias1 (ENSMAUG00000000785) Calml4 (ENSMAUG00000015006) Cln6 (ENSMAUG00000009546) Itga11 (ENSMAUG00000002222) Coro2b (ENSMAUG00000009618) Anp32a (ENSMAUG00000000632) Spesp1 (ENSMAUG00000008837) Glce (ENSMAUG00000013447) Paqr5 (ENSMAUG00000009377) Kif23 (ENSMAUG00000009848) Murinae ANCESTRAL SPECIES 3 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Mus ANCESTRAL SPECIES 4 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Mus_A ANCESTRAL SPECIES 4 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Mus_B ANCESTRAL SPECIES 3 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000154925.c.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859.e.b ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Mouse MODERN SPECIES 18 Dpp8 (ENSMUSG00000032393) Hacd3 (ENSMUSG00000033629) Ints14 (ENSMUSG00000034263) Slc24a1 (ENSMUSG00000034452) #7 Dennd4a (ENSMUSG00000053641) #11 Rab11a (ENSMUSG00000004771) #12 Megf11 (ENSMUSG00000036466) #14 Dis3l (ENSMUSG00000032396) #15 Tipin (ENSMUSG00000032397) #16 Uchl4 (ENSMUSG00000035337) Map2k1 (ENSMUSG00000004936) #17 Snapc5 (ENSMUSG00000032398) #18 Rpl4 (ENSMUSG00000032399) #19 Zwilch (ENSMUSG00000032400) #20 Lctl (ENSMUSG00000032401) #21 Smad6 (ENSMUSG00000036867) #22 Smad3 (ENSMUSG00000032402) #23 Aagab (ENSMUSG00000037257) #24 Iqch (ENSMUSG00000037801) #25 2300009A05Rik (ENSMUSG00000032403) Map2k5 (ENSMUSG00000058444) Skor1 (ENSMUSG00000022245) Pias1 (ENSMUSG00000032405) Calml4 (ENSMUSG00000032246) Cln6 (ENSMUSG00000032245) Fem1b (ENSMUSG00000032244) Itga11 (ENSMUSG00000032243) Coro2b (ENSMUSG00000041729) Anp32a (ENSMUSG00000032249) Spesp1 (ENSMUSG00000046846) Glce (ENSMUSG00000032252) Mus_C ANCESTRAL SPECIES 8 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000154925.c.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859.e.b ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 spretus MODERN SPECIES 18 Dpp8 (MGP_SPRETEiJ_G0033490) Hacd3 (MGP_SPRETEiJ_G0033489) Ints14 (MGP_SPRETEiJ_G0033488) Slc24a1 (MGP_SPRETEiJ_G0033487) #7 Dennd4a (MGP_SPRETEiJ_G0033486) #11 Rab11a (MGP_SPRETEiJ_G0033485) #12 Megf11 (MGP_SPRETEiJ_G0033484) #14 Dis3l (MGP_SPRETEiJ_G0033483) #15 Tipin (MGP_SPRETEiJ_G0033482) #16 MGP_SPRETEiJ_G0033481 Map2k1 (MGP_SPRETEiJ_G0033480) #17 Snapc5 (MGP_SPRETEiJ_G0033479) #18 Rpl4 (MGP_SPRETEiJ_G0033478) #19 Zwilch (MGP_SPRETEiJ_G0033477) #20 Lctl (MGP_SPRETEiJ_G0033476) #21 Smad6 (MGP_SPRETEiJ_G0033475) #22 Smad3 (MGP_SPRETEiJ_G0033474) #23 Aagab (MGP_SPRETEiJ_G0033473) #24 Iqch (MGP_SPRETEiJ_G0033472) #25 2300009A05Rik (MGP_SPRETEiJ_G0033471) Map2k5 (MGP_SPRETEiJ_G0033470) Skor1 (MGP_SPRETEiJ_G0033469) Pias1 (MGP_SPRETEiJ_G0033468) Calml4 (MGP_SPRETEiJ_G0033467) MGP_SPRETEiJ_G0033466 Cln6 (MGP_SPRETEiJ_G0033465) Fem1b (MGP_SPRETEiJ_G0033464) Itga11 (MGP_SPRETEiJ_G0033463) Coro2b (MGP_SPRETEiJ_G0033462) Anp32a (MGP_SPRETEiJ_G0033461) Spesp1 (MGP_SPRETEiJ_G0033460) Steppe mouse MODERN SPECIES 3365 Ints14 (ENSMSIG00000005077) Slc24a1 (ENSMSIG00000005039) #7 Dennd4a (ENSMSIG00000004975) #11 Rab11a (ENSMSIG00000004938) #12 Megf11 (ENSMSIG00000004481) #14 Dis3l (ENSMSIG00000004353) #15 Tipin (ENSMSIG00000004296) #16 Uchl4 (ENSMSIG00000004289) Map2k1 (ENSMSIG00000004246) #17 Snapc5 (ENSMSIG00000004231) #18 Rpl4 (ENSMSIG00000004124) #19 Zwilch (ENSMSIG00000003872) #20 Lctl (ENSMSIG00000003776) #21 ENSMSIG00000003769 ENSMSIG00000003749 Smad6 (ENSMSIG00000003718) #22 ENSMSIG00000003710 Smad3 (ENSMSIG00000003679) #23 Aagab (ENSMSIG00000003642) #24 ENSMSIG00000003630 Iqch (ENSMSIG00000002651) #25 2300009A05Rik (ENSMSIG00000002599) Map2k5 (ENSMSIG00000002321) Skor1 (ENSMSIG00000002179) Pias1 (ENSMSIG00000002027) ENSMSIG00000001996 Cln6 (ENSMSIG00000001974) Fem1b (ENSMSIG00000001951) Itga11 (ENSMSIG00000001884) Coro2b (ENSMSIG00000001799) ENSMSIG00000001693 Ryukyu mouse MODERN SPECIES 18 Dpp8 (MGP_CAROLIEiJ_G0032351) Hacd3 (MGP_CAROLIEiJ_G0032350) Ints14 (MGP_CAROLIEiJ_G0032349) Slc24a1 (MGP_CAROLIEiJ_G0032348) #7 Dennd4a (MGP_CAROLIEiJ_G0032347) #11 Rab11a (MGP_CAROLIEiJ_G0032346) #12 Megf11 (MGP_CAROLIEiJ_G0032345) #14 Dis3l (MGP_CAROLIEiJ_G0032344) #15 Tipin (MGP_CAROLIEiJ_G0032343) #16 MGP_CAROLIEiJ_G0032342 Map2k1 (MGP_CAROLIEiJ_G0032341) #17 Snapc5 (MGP_CAROLIEiJ_G0032340) #18 Rpl4 (MGP_CAROLIEiJ_G0032339) #19 Zwilch (MGP_CAROLIEiJ_G0032338) #20 Lctl (MGP_CAROLIEiJ_G0032337) #21 Smad6 (MGP_CAROLIEiJ_G0032336) #22 Smad3 (MGP_CAROLIEiJ_G0032335) #23 Aagab (MGP_CAROLIEiJ_G0032334) #24 Iqch (MGP_CAROLIEiJ_G0032333) #25 2300009A05Rik (MGP_CAROLIEiJ_G0032332) Map2k5 (MGP_CAROLIEiJ_G0032331) Skor1 (MGP_CAROLIEiJ_G0032330) Pias1 (MGP_CAROLIEiJ_G0032329) Calml4 (MGP_CAROLIEiJ_G0032328) Cln6 (MGP_CAROLIEiJ_G0032327) Fem1b (MGP_CAROLIEiJ_G0032326) Itga11 (MGP_CAROLIEiJ_G0032325) Coro2b (MGP_CAROLIEiJ_G0032324) Anp32a (MGP_CAROLIEiJ_G0032323) Spesp1 (MGP_CAROLIEiJ_G0032322) Glce (MGP_CAROLIEiJ_G0032321) Shrew mouse MODERN SPECIES 1 MGP_PahariEiJ_G0015218 Igdcc4 (MGP_PahariEiJ_G0015217) Dpp8 (MGP_PahariEiJ_G0015216) Hacd3 (MGP_PahariEiJ_G0015215) Ints14 (MGP_PahariEiJ_G0015214) Slc24a1 (MGP_PahariEiJ_G0015213) #7 Dennd4a (MGP_PahariEiJ_G0015212) #11 Rab11a (MGP_PahariEiJ_G0015211) #12 Megf11 (MGP_PahariEiJ_G0015210) #14 Dis3l (MGP_PahariEiJ_G0015209) #15 Tipin (MGP_PahariEiJ_G0015208) #16 Map2k1 (MGP_PahariEiJ_G0015207) #17 Snapc5 (MGP_PahariEiJ_G0015206) #18 Rpl4 (MGP_PahariEiJ_G0015205) #19 Zwilch (MGP_PahariEiJ_G0015204) #20 Smad6 (MGP_PahariEiJ_G0015202) #22 Smad3 (MGP_PahariEiJ_G0015201) #23 Aagab (MGP_PahariEiJ_G0015200) #24 Iqch (MGP_PahariEiJ_G0015199) #25 2300009A05Rik (MGP_PahariEiJ_G0015198) Map2k5 (MGP_PahariEiJ_G0015197) Skor1 (MGP_PahariEiJ_G0015196) Pias1 (MGP_PahariEiJ_G0015195) Calml4 (MGP_PahariEiJ_G0015194) MGP_PahariEiJ_G0015193 Fem1b (MGP_PahariEiJ_G0015192) Itga11 (MGP_PahariEiJ_G0015191) Coro2b (MGP_PahariEiJ_G0015190) Anp32a (MGP_PahariEiJ_G0015189) Spesp1 (MGP_PahariEiJ_G0015188) Glce (MGP_PahariEiJ_G0015187) Rat MODERN SPECIES 18 Igdcc4 (ENSRNOG00000033496) Dpp8 (ENSRNOG00000019105) Hacd3 (ENSRNOG00000030232) Ints14 (ENSRNOG00000012469) Slc24a1 (ENSRNOG00000052051) #7 Dennd4a (ENSRNOG00000011739) #11 LOC120094392 (ENSRNOG00000071140) Rab11a (ENSRNOG00000011302) #12 Megf11 (ENSRNOG00000010634) #14 Dis3l (ENSRNOG00000010537) #15 Tipin (ENSRNOG00000043068) #16 Map2k1 (ENSRNOG00000010176) #17 Rpl4 (ENSRNOG00000009378) #19 Zwilch (ENSRNOG00000009303) #20 Lctl (ENSRNOG00000009193) #21 Smad6 (ENSRNOG00000009173) #22 Smad3 (ENSRNOG00000008620) #23 Aagab (ENSRNOG00000008424) #24 Iqch (ENSRNOG00000008353) #25 C8h15orf61 (ENSRNOG00000008340) AC132740.1 (ENSRNOG00000054780) Map2k5 (ENSRNOG00000007926) Skor1 (ENSRNOG00000013959) Pias1 (ENSRNOG00000034272) Calml4 (ENSRNOG00000038202) Cln6 (ENSRNOG00000007164) Fem1b (ENSRNOG00000007077) Itga11 (ENSRNOG00000006723) Coro2b (ENSRNOG00000015257) Anp32a (ENSRNOG00000014846) Spesp1 (ENSRNOG00000025359) Upper Galilee mountains blind mole rat MODERN SPECIES 955 Igdcc4 (ENSNGAG00000022064) Dpp8 (ENSNGAG00000019579) Hacd3 (ENSNGAG00000016924) Ints14 (ENSNGAG00000007105) Slc24a1 (ENSNGAG00000010674) #7 ENSNGAG00000022619 #11 Rab11a (ENSNGAG00000013726) #12 Megf11 (ENSNGAG00000011352) #14 Dis3l (ENSNGAG00000017008) #15 Tipin (ENSNGAG00000018237) #16 Map2k1 (ENSNGAG00000006894) #17 Snapc5 (ENSNGAG00000006133) #18 ENSNGAG00000006653 #19 Zwilch (ENSNGAG00000016626) #20 Lctl (ENSNGAG00000012911) #21 Smad6 (ENSNGAG00000021223) #22 ENSNGAG00000022756 Smad3 (ENSNGAG00000023535) #23 ENSNGAG00000010708 #24 Iqch (ENSNGAG00000019505) #25 2300009A05Rik (ENSNGAG00000004715) Map2k5 (ENSNGAG00000011076) Skor1 (ENSNGAG00000020060) Pias1 (ENSNGAG00000022735) Calml4 (ENSNGAG00000016088) Cln6 (ENSNGAG00000023832) ENSNGAG00000021620 Itga11 (ENSNGAG00000024101) Coro2b (ENSNGAG00000024331) ENSNGAG00000017524 ENSNGAG00000005322 Lesser Egyptian jerboa MODERN SPECIES 92 Dpp8 (ENSJJAG00000018252) Hacd3 (ENSJJAG00000016608) Ints14 (ENSJJAG00000005359) Slc24a1 (ENSJJAG00000009344) #7 ENSJJAG00000012113 #11 ENSJJAG00000015445 #12 Megf11 (ENSJJAG00000023890) #14 ENSJJAG00000019234 Dis3l (ENSJJAG00000016147) #15 Tipin (ENSJJAG00000017947) #16 Map2k1 (ENSJJAG00000021452) #17 Snapc5 (ENSJJAG00000022013) #18 ENSJJAG00000013677 #19 Zwilch (ENSJJAG00000010189) #20 Lctl (ENSJJAG00000013579) #21 Smad6 (ENSJJAG00000019623) #22 Smad3 (ENSJJAG00000021414) #23 ENSJJAG00000018312 #24 Iqch (ENSJJAG00000024416) #25 2300009A05Rik (ENSJJAG00000019436) Map2k5 (ENSJJAG00000024208) Skor1 (ENSJJAG00000003624) ENSJJAG00000019728 Calml4 (ENSJJAG00000014113) Cln6 (ENSJJAG00000024405) Fem1b (ENSJJAG00000018686) Itga11 (ENSJJAG00000007244) Coro2b (ENSJJAG00000003058) Anp32a (ENSJJAG00000019278) Kangaroo rat MODERN SPECIES 330 Dpp8 (ENSDORG00000009050) Hacd3 (ENSDORG00000009307) Ints14 (ENSDORG00000009309) Slc24a1 (ENSDORG00000007185) #7 Dennd4a (ENSDORG00000002146) #11 ENSDORG00000028034 #12 ENSDORG00000026125 Megf11 (ENSDORG00000001008) #14 Dis3l (ENSDORG00000014909) #15 Tipin (ENSDORG00000028988) #16 Map2k1 (ENSDORG00000001301) #17 Snapc5 (ENSDORG00000030051) #18 Rpl4 (ENSDORG00000016287) #19 Zwilch (ENSDORG00000016288) #20 Lctl (ENSDORG00000016291) #21 Smad6 (ENSDORG00000028234) #22 ENSDORG00000026894 Smad3 (ENSDORG00000029949) #23 ENSDORG00000026611 #24 Iqch (ENSDORG00000006468) #25 2300009A05Rik (ENSDORG00000028687) Map2k5 (ENSDORG00000005673) Skor1 (ENSDORG00000005677) Rodentia_A ANCESTRAL SPECIES 2 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Sciuridae ANCESTRAL SPECIES 11 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Marmotini ANCESTRAL SPECIES 9 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Marmotini_b ANCESTRAL SPECIES 4 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Squirrel MODERN SPECIES 71 DPP8 (ENSSTOG00000002203) ENSSTOG00000025872 HACD3 (ENSSTOG00000002211) INTS14 (ENSSTOG00000002217) SLC24A1 (ENSSTOG00000002228) #7 DENND4A (ENSSTOG00000026966) #11 RAB11A (ENSSTOG00000015255) #12 MEGF11 (ENSSTOG00000015258) #14 DIS3L (ENSSTOG00000009158) #15 TIPIN (ENSSTOG00000009182) #16 MAP2K1 (ENSSTOG00000009190) #17 SNAPC5 (ENSSTOG00000009201) #18 RPL4 (ENSSTOG00000009221) #19 ZWILCH (ENSSTOG00000009607) #20 LCTL (ENSSTOG00000028073) #21 SMAD6 (ENSSTOG00000000696) #22 SMAD3 (ENSSTOG00000010286) #23 AAGAB (ENSSTOG00000010291) #24 IQCH (ENSSTOG00000010299) #25 C15orf61 (ENSSTOG00000010312) MAP2K5 (ENSSTOG00000010318) SKOR1 (ENSSTOG00000002675) PIAS1 (ENSSTOG00000015532) CALML4 (ENSSTOG00000015539) CLN6 (ENSSTOG00000015540) FEM1B (ENSSTOG00000015544) ITGA11 (ENSSTOG00000015545) CORO2B (ENSSTOG00000015918) ENSSTOG00000015929 GLCE (ENSSTOG00000019509) PAQR5 (ENSSTOG00000000507) Arctic ground squirrel MODERN SPECIES 397 MAP2K1 (ENSUPAG00010018149) #17 SNAPC5 (ENSUPAG00010018142) #18 RPL4 (ENSUPAG00010018119) #19 ZWILCH (ENSUPAG00010018079) #20 LCTL (ENSUPAG00010018063) #21 SMAD6 (ENSUPAG00010018050) #22 ENSUPAG00010018048 SMAD3 (ENSUPAG00010018010) #23 AAGAB (ENSUPAG00010018001) #24 IQCH (ENSUPAG00010017914) #25 C15orf61 (ENSUPAG00010017904) MAP2K5 (ENSUPAG00010017819) SKOR1 (ENSUPAG00010017792) ENSUPAG00010017781 PIAS1 (ENSUPAG00010017772) CALML4 (ENSUPAG00010017747) CLN6 (ENSUPAG00010017740) FEM1B (ENSUPAG00010017736) ITGA11 (ENSUPAG00010017705) Alpin marmot MODERN SPECIES 7 HACD3 (ENSMMMG00000006884) INTS14 (ENSMMMG00000006868) SLC24A1 (ENSMMMG00000006817) #7 DENND4A (ENSMMMG00000006769) #11 ENSMMMG00000006762 RAB11A (ENSMMMG00000006747) #12 MEGF11 (ENSMMMG00000006311) #14 DIS3L (ENSMMMG00000006220) #15 TIPIN (ENSMMMG00000006196) #16 MAP2K1 (ENSMMMG00000006173) #17 SNAPC5 (ENSMMMG00000006163) #18 RPL4 (ENSMMMG00000006109) #19 ENSMMMG00000006104 ZWILCH (ENSMMMG00000006077) #20 LCTL (ENSMMMG00000006061) #21 SMAD6 (ENSMMMG00000006032) #22 ENSMMMG00000006027 SMAD3 (ENSMMMG00000005977) #23 AAGAB (ENSMMMG00000005970) #24 IQCH (ENSMMMG00000005869) #25 ENSMMMG00000005844 MAP2K5 (ENSMMMG00000005809) SKOR1 (ENSMMMG00000005773) PIAS1 (ENSMMMG00000005733) CALML4 (ENSMMMG00000005699) CLN6 (ENSMMMG00000005687) ENSMMMG00000005671 ITGA11 (ENSMMMG00000005622) CORO2B (ENSMMMG00000005600) ENSMMMG00000005555 SPESP1 (ENSMMMG00000005545) Eurasian red squirrel MODERN SPECIES 11 DPP8 (ENSSVLG00005023347) ENSSVLG00005023642 HACD3 (ENSSVLG00005023708) INTS14 (ENSSVLG00005023820) SLC24A1 (ENSSVLG00005023979) #7 DENND4A (ENSSVLG00005024160) #11 RAB11A (ENSSVLG00005024246) #12 MEGF11 (ENSSVLG00005024351) #14 DIS3L (ENSSVLG00005024622) #15 TIPIN (ENSSVLG00005024668) #16 MAP2K1 (ENSSVLG00005024707) #17 SNAPC5 (ENSSVLG00005024729) #18 ENSSVLG00005024744 #19 ZWILCH (ENSSVLG00005024833) #20 LCTL (ENSSVLG00005024912) #21 SMAD6 (ENSSVLG00005024946) #22 ENSSVLG00005024968 SMAD3 (ENSSVLG00005024991) #23 AAGAB (ENSSVLG00005025018) #24 IQCH (ENSSVLG00005025085) #25 C15orf61 (ENSSVLG00005006592) MAP2K5 (ENSSVLG00005006656) SKOR1 (ENSSVLG00005006917) PIAS1 (ENSSVLG00005007019) CALML4 (ENSSVLG00005007109) CLN6 (ENSSVLG00005007215) FEM1B (ENSSVLG00005007302) ITGA11 (ENSSVLG00005007326) CORO2B (ENSSVLG00005007364) ENSSVLG00005007452 ENSSVLG00005007513 Hystricomorpha ANCESTRAL SPECIES 36 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.vb #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Naked mole-rat female MODERN SPECIES 19 HACD3 (ENSHGLG00000011870) INTS14 (ENSHGLG00000010722) SLC24A1 (ENSHGLG00000008872) #7 DENND4A (ENSHGLG00000009810) #11 ENSHGLG00000044288 RAB11A (ENSHGLG00000048551) #12 MEGF11 (ENSHGLG00000011012) #14 ENSHGLG00000007770 #15 ENSHGLG00000005971 #16 ENSHGLG00000048822 ENSHGLG00000010036 #17 ENSHGLG00000040904 #18 ENSHGLG00000008054 #19 ZWILCH (ENSHGLG00000016059) #20 LCTL (ENSHGLG00000015669) #21 SMAD6 (ENSHGLG00000008453) #22 SMAD3 (ENSHGLG00000048787) #23 AAGAB (ENSHGLG00000038898) #24 ENSHGLG00000026352 #25 C15orf61 (ENSHGLG00000038870) MAP2K5 (ENSHGLG00000006627) SKOR1 (ENSHGLG00000017297) Pias1 (ENSHGLG00000019002) Calml4 (ENSHGLG00000018794) CLN6 (ENSHGLG00000017958) FEM1B (ENSHGLG00000017948) ITGA11 (ENSHGLG00000007233) CORO2B (ENSHGLG00000015273) ENSHGLG00000013229 SPESP1 (ENSHGLG00000046924) GLCE (ENSHGLG00000033764) Hystricomorpha_a ANCESTRAL SPECIES 38 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.vb #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Guinea pig MODERN SPECIES SNX1 (ENSCPOG00000000253) CIAO2A (ENSCPOG00000033175) DAPK2 (ENSCPOG00000000890) ENSCPOG00000030019 ENSCPOG00000007146 PTP4A1 (ENSCPOG00000032105) LGSN (ENSCPOG00000008736) KHDRBS2 (ENSCPOG00000025621) PRIM2 (ENSCPOG00000003912) ENSCPOG00000035048 RAB23 (ENSCPOG00000030218) BAG2 (ENSCPOG00000040302) ZNF451 (ENSCPOG00000002491) BEND6 (ENSCPOG00000015453) DST (ENSCPOG00000005092) SMAD6 (ENSCPOG00000001535) #22 SMAD3 (ENSCPOG00000021314) #23 AAGAB (ENSCPOG00000000965) #24 C15orf61 (ENSCPOG00000022542) MAP2K5 (ENSCPOG00000000970) SKOR1 (ENSCPOG00000012665) PIAS1 (ENSCPOG00000007278) CALML4 (ENSCPOG00000033517) CLN6 (ENSCPOG00000007282) FEM1B (ENSCPOG00000031057) ITGA11 (ENSCPOG00000012877) CORO2B (ENSCPOG00000023117) ENSCPOG00000008829 GLCE (ENSCPOG00000020608) Hystricomorpha_b ANCESTRAL SPECIES 35 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.vb #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00390000006043 Degu MODERN SPECIES 67 IGDCC4 (ENSODEG00000016455) DPP8 (ENSODEG00000016356) HACD3 (ENSODEG00000016975) INTS14 (ENSODEG00000017006) SLC24A1 (ENSODEG00000016047) #7 ENSODEG00000016544 #11 ENSODEG00000016435 ENSODEG00000016878 #12 MEGF11 (ENSODEG00000015967) #14 DIS3L (ENSODEG00000015811) #15 MAP2K1 (ENSODEG00000016739) #17 ENSODEG00000016495 #19 ZWILCH (ENSODEG00000016374) #20 LCTL (ENSODEG00000016271) #21 ENSODEG00000020317 SMAD6 (ENSODEG00000016272) #22 SMAD3 (ENSODEG00000015739) #23 ENSODEG00000015886 #24 ENSODEG00000020336 IQCH (ENSODEG00000016134) #25 C15orf61 (ENSODEG00000016721) ENSODEG00000016511 MAP2K5 (ENSODEG00000015607) SKOR1 (ENSODEG00000015903) PIAS1 (ENSODEG00000016418) CALML4 (ENSODEG00000015441) CLN6 (ENSODEG00000015888) ENSODEG00000016475 ENSODEG00000020366 ITGA11 (ENSODEG00000015700) CORO2B (ENSODEG00000016099) Long-tailed chinchilla MODERN SPECIES 157 IGDCC4 (ENSCLAG00000007751) DPP8 (ENSCLAG00000014937) HACD3 (ENSCLAG00000010725) INTS14 (ENSCLAG00000009395) SLC24A1 (ENSCLAG00000013073) #7 DENND4A (ENSCLAG00000007003) #11 RAB11A (ENSCLAG00000007435) #12 MEGF11 (ENSCLAG00000013146) #14 DIS3L (ENSCLAG00000005741) #15 TIPIN (ENSCLAG00000004924) #16 MAP2K1 (ENSCLAG00000013042) #17 SNAPC5 (ENSCLAG00000011660) #18 RPL4 (ENSCLAG00000010827) #19 ZWILCH (ENSCLAG00000010124) #20 LCTL (ENSCLAG00000004564) #21 ENSCLAG00000005550 #22 SMAD3 (ENSCLAG00000005027) #23 AAGAB (ENSCLAG00000008364) #24 IQCH (ENSCLAG00000011031) #25 C15orf61 (ENSCLAG00000008894) MAP2K5 (ENSCLAG00000005277) SKOR1 (ENSCLAG00000007488) PIAS1 (ENSCLAG00000008129) CALML4 (ENSCLAG00000008707) CLN6 (ENSCLAG00000007035) FEM1B (ENSCLAG00000004834) ITGA11 (ENSCLAG00000006568) CORO2B (ENSCLAG00000006658) ENSCLAG00000010256 SPESP1 (ENSCLAG00000009992) GLCE (ENSCLAG00000009057) Lagomorpha ANCESTRAL SPECIES 7 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00950000183167.a.b.a ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000154905 ENSGT00390000014038 ENSGT00940000159572 ENSGT00390000008859.b.d.j Pika MODERN SPECIES 1524 IQCH (ENSOPRG00000014936) #25 SMAD6 (ENSOPRG00000014974) #22 SMAD3 (ENSOPRG00000014996) #23 AAGAB (ENSOPRG00000015012) #24 Rabbit MODERN SPECIES 8 DPP8 (ENSOCUG00000011751) HACD3 (ENSOCUG00000007513) INTS14 (ENSOCUG00000007520) ENSOCUG00000027844 #7 DENND4A (ENSOCUG00000007953) #11 RAB11A (ENSOCUG00000014755) #12 MEGF11 (ENSOCUG00000014760) #14 DIS3L (ENSOCUG00000002206) #15 TIPIN (ENSOCUG00000002212) #16 ENSOCUG00000023060 MAP2K1 (ENSOCUG00000008782) #17 SNAPC5 (ENSOCUG00000039231) #18 ENSOCUG00000008794 #19 ZWILCH (ENSOCUG00000008800) #20 LCTL (ENSOCUG00000021771) #21 ENSOCUG00000006134 #22 ENSOCUG00000014186 SMAD3 (ENSOCUG00000029601) #23 ENSOCUG00000039204 AAGAB (ENSOCUG00000006644) #24 IQCH (ENSOCUG00000006647) #25 MAP2K5 (ENSOCUG00000009024) PIAS1 (ENSOCUG00000000618) CLN6 (ENSOCUG00000017533) FEM1B (ENSOCUG00000026586) ITGA11 (ENSOCUG00000017726) ENSOCUG00000036279 MYO9A (ENSOCUG00000017425) SENP8 (ENSOCUG00000026054) GRAMD2A (ENSOCUG00000006107) ENSOCUG00000006119 Laurasiatheria ANCESTRAL SPECIES 3 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00960000188521 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Laurasiatheria_a ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00960000188521 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Artiodactyla ANCESTRAL SPECIES 3 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Suina ANCESTRAL SPECIES 12 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Pig MODERN SPECIES DPP8 (ENSSSCG00000004934) HACD3 (ENSSSCG00000004935) INTS14 (ENSSSCG00000004936) SLC24A1 (ENSSSCG00000004937) #7 DENND4A (ENSSSCG00000004938) #11 RAB11A (ENSSSCG00000032312) #12 MEGF11 (ENSSSCG00000004939) #14 DIS3L (ENSSSCG00000004941) #15 TIPIN (ENSSSCG00000004942) #16 MAP2K1 (ENSSSCG00000004943) #17 SNAPC5 (ENSSSCG00000038941) #18 RPL4 (ENSSSCG00000004945) #19 ZWILCH (ENSSSCG00000004946) #20 ENSSSCG00000051767 LCTL (ENSSSCG00000004947) #21 SMAD6 (ENSSSCG00000004948) #22 SMAD3 (ENSSSCG00000004952) #23 AAGAB (ENSSSCG00000004951) #24 ENSSSCG00000057448 #25 ENSSSCG00000034963 #25 C15orf61 (ENSSSCG00000004954) MAP2K5 (ENSSSCG00000004955) SKOR1 (ENSSSCG00000004956) PIAS1 (ENSSSCG00000004958) CALML4 (ENSSSCG00000026517) CLN6 (ENSSSCG00000004957) FEM1B (ENSSSCG00000022419) ITGA11 (ENSSSCG00000004961) CORO2B (ENSSSCG00000004962) ENSSSCG00000004963 SPESP1 (ENSSSCG00000032244) Chacoan peccary MODERN SPECIES 786 IGDCC4 (ENSCWAG00000018683) DPP8 (ENSCWAG00000018161) HACD3 (ENSCWAG00000017975) INTS14 (ENSCWAG00000017595) SLC24A1 (ENSCWAG00000017106) #7 DENND4A (ENSCWAG00000016363) #11 RAB11A (ENSCWAG00000016259) #12 MEGF11 (ENSCWAG00000015726) #14 DIS3L (ENSCWAG00000015597) #15 TIPIN (ENSCWAG00000015560) #16 MAP2K1 (ENSCWAG00000015519) #17 SNAPC5 (ENSCWAG00000015485) #18 RPL4 (ENSCWAG00000015376) #19 ZWILCH (ENSCWAG00000015266) #20 LCTL (ENSCWAG00000015109) #21 SMAD6 (ENSCWAG00000015079) #22 SMAD3 (ENSCWAG00000015026) #23 AAGAB (ENSCWAG00000014993) #24 IQCH (ENSCWAG00000014432) #25 C15orf61 (ENSCWAG00000014382) MAP2K5 (ENSCWAG00000013886) SKOR1 (ENSCWAG00000013676) PIAS1 (ENSCWAG00000013465) CALML4 (ENSCWAG00000013422) CLN6 (ENSCWAG00000013181) FEM1B (ENSCWAG00000013140) ITGA11 (ENSCWAG00000013057) CORO2B (ENSCWAG00000012937) ENSCWAG00000012876 SPESP1 (ENSCWAG00000012853) GLCE (ENSCWAG00000012796) Artiodactyla_a ANCESTRAL SPECIES 2 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Camelidae ANCESTRAL SPECIES 83 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 Arabian camel MODERN SPECIES 32 DPP8 (ENSCDRG00005001839) HACD3 (ENSCDRG00005001929) INTS14 (ENSCDRG00005001994) SLC24A1 (ENSCDRG00005002129) #7 DENND4A (ENSCDRG00005002286) #11 RAB11A (ENSCDRG00005002443) #12 MEGF11 (ENSCDRG00005002479) #14 DIS3L (ENSCDRG00005002526) #15 TIPIN (ENSCDRG00005002562) #16 MAP2K1 (ENSCDRG00005002580) #17 SNAPC5 (ENSCDRG00005002604) #18 ENSCDRG00005002627 #19 ZWILCH (ENSCDRG00005002673) #20 LCTL (ENSCDRG00005002712) #21 ENSCDRG00005002745 ENSCDRG00005002755 #22 SMAD3 (ENSCDRG00005002780) #23 AAGAB (ENSCDRG00005002843) #24 IQCH (ENSCDRG00005002929) #25 C15orf61 (ENSCDRG00005003109) MAP2K5 (ENSCDRG00005003152) PIAS1 (ENSCDRG00005003494) ENSCDRG00005003580 CALML4 (ENSCDRG00005003629) CLN6 (ENSCDRG00005003662) ENSCDRG00005003720 ENSCDRG00005003749 RAB8B (ENSCDRG00005003808) APH1B (ENSCDRG00005003835) CA12 (ENSCDRG00005003913) ENSCDRG00005004006 Artiodactyla_b ANCESTRAL SPECIES 2 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Cetacea ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Odontoceti ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00390000000134.b.p.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 Odontoceti_a ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00390000000134.b.p.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 Odontoceti_b ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00390000000134.b.p.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 Monodontidae ANCESTRAL SPECIES 27 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00390000012563.i.a ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.b #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00390000000134.b.p.b ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT00940000158086 ENSGT00940000157725 ENSGT00860000136093.c ENSGT00390000008748.b ENSGT00940000164579.e.b ENSGT00390000005300 ENSGT00510000048252 ENSGT00940000155628 Narwhal MODERN SPECIES 308 HACD3 (ENSMMNG00015006843) INTS14 (ENSMMNG00015006934) SLC24A1 (ENSMMNG00015007028) #7 DENND4A (ENSMMNG00015007114) #11 RAB11A (ENSMMNG00015007170) #12 MEGF11 (ENSMMNG00015007280) #14 DIS3L (ENSMMNG00015007393) #15 TIPIN (ENSMMNG00015007474) #16 ENSMMNG00015007536 MAP2K1 (ENSMMNG00015007579) #17 SNAPC5 (ENSMMNG00015007601) #18 ENSMMNG00015007652 #19 ZWILCH (ENSMMNG00015007746) #20 LCTL (ENSMMNG00015007784) #21 ENSMMNG00015007816 SMAD6 (ENSMMNG00015007869) #22 ENSMMNG00015007889 SMAD3 (ENSMMNG00015007909) #23 AAGAB (ENSMMNG00015007942) #24 IQCH (ENSMMNG00015008052) #25 C15orf61 (ENSMMNG00015008139) MAP2K5 (ENSMMNG00015008216) SKOR1 (ENSMMNG00015008331) ENSMMNG00015008358 PIAS1 (ENSMMNG00015008373) CALML4 (ENSMMNG00015008408) CLN6 (ENSMMNG00015008469) FEM1B (ENSMMNG00015008513) ITGA11 (ENSMMNG00015008533) CORO2B (ENSMMNG00015008567) ENSMMNG00015008598 Beluga whale MODERN SPECIES 20 INTS14 (ENSDLEG00000009368) SLC24A1 (ENSDLEG00000009406) #7 DENND4A (ENSDLEG00000009569) #11 RAB11A (ENSDLEG00000009643) #12 MEGF11 (ENSDLEG00000009720) #14 DIS3L (ENSDLEG00000009982) #15 TIPIN (ENSDLEG00000010313) #16 ENSDLEG00000010343 MAP2K1 (ENSDLEG00000010364) #17 SNAPC5 (ENSDLEG00000010421) #18 RPL4 (ENSDLEG00000010430) #19 ZWILCH (ENSDLEG00000010482) #20 LCTL (ENSDLEG00000010607) #21 ENSDLEG00000010647 ENSDLEG00000010657 SMAD6 (ENSDLEG00000010676) #22 ENSDLEG00000010689 SMAD3 (ENSDLEG00000010707) #23 AAGAB (ENSDLEG00000010803) #24 IQCH (ENSDLEG00000010864) #25 CUNH15orf61 (ENSDLEG00000010984) MAP2K5 (ENSDLEG00000011046) SKOR1 (ENSDLEG00000011320) ENSDLEG00000011378 ENSDLEG00000011393 PIAS1 (ENSDLEG00000011410) CALML4 (ENSDLEG00000011480) CLN6 (ENSDLEG00000011495) FEM1B (ENSDLEG00000011544) ITGA11 (ENSDLEG00000000304) CORO2B (ENSDLEG00000000393) Vaquita MODERN SPECIES 11 HACD3 (ENSPSNG00000003119) INTS14 (ENSPSNG00000003047) SLC24A1 (ENSPSNG00000002890) #7 DENND4A (ENSPSNG00000002770) #11 ENSPSNG00000002715 RAB11A (ENSPSNG00000002694) #12 MEGF11 (ENSPSNG00000002539) #14 ENSPSNG00000002464 #15 TIPIN (ENSPSNG00000002436) #16 MAP2K1 (ENSPSNG00000002407) #17 SNAPC5 (ENSPSNG00000002388) #18 ENSPSNG00000002352 #19 ZWILCH (ENSPSNG00000002336) #20 LCTL (ENSPSNG00000002318) #21 ENSPSNG00000002306 SMAD6 (ENSPSNG00000002293) #22 ENSPSNG00000002286 SMAD3 (ENSPSNG00000002263) #23 AAGAB (ENSPSNG00000002239) #24 IQCH (ENSPSNG00000002126) #25 C15orf61 (ENSPSNG00000002043) MAP2K5 (ENSPSNG00000001943) SKOR1 (ENSPSNG00000001839) ENSPSNG00000001804 PIAS1 (ENSPSNG00000001758) CALML4 (ENSPSNG00000001723) CLN6 (ENSPSNG00000001671) FEM1B (ENSPSNG00000001608) ITGA11 (ENSPSNG00000001465) CORO2B (ENSPSNG00000001338) ENSPSNG00000001312 Dolphin MODERN SPECIES 1669 DIS3L (ENSTTRG00000010174) #15 TIPIN (ENSTTRG00000010187) #16 MAP2K1 (ENSTTRG00000010193) #17 SNAPC5 (ENSTTRG00000010201) #18 RPL4 (ENSTTRG00000010206) #19 ZWILCH (ENSTTRG00000010212) #20 LCTL (ENSTTRG00000010226) #21 SMAD6 (ENSTTRG00000010237) #22 Sperm whale MODERN SPECIES 2 DPP8 (ENSPCTG00005014761) HACD3 (ENSPCTG00005015026) INTS14 (ENSPCTG00005015317) SLC24A1 (ENSPCTG00005015689) #7 DENND4A (ENSPCTG00005016168) #11 RAB11A (ENSPCTG00005016434) #12 MEGF11 (ENSPCTG00005016590) #14 DIS3L (ENSPCTG00005017408) #15 TIPIN (ENSPCTG00005017493) #16 MAP2K1 (ENSPCTG00005017538) #17 SNAPC5 (ENSPCTG00005017569) #18 ENSPCTG00005017611 #19 ZWILCH (ENSPCTG00005017727) #20 LCTL (ENSPCTG00005017782) #21 ENSPCTG00005018004 SMAD6 (ENSPCTG00005018032) #22 ENSPCTG00005018068 SMAD3 (ENSPCTG00005018084) #23 AAGAB (ENSPCTG00005018169) #24 IQCH (ENSPCTG00005018285) #25 C11H15orf61 (ENSPCTG00005018901) MAP2K5 (ENSPCTG00005018992) SKOR1 (ENSPCTG00005019628) ENSPCTG00005019847 ENSPCTG00005019890 PIAS1 (ENSPCTG00005019931) CALML4 (ENSPCTG00005019999) CLN6 (ENSPCTG00005020048) FEM1B (ENSPCTG00005020203) ITGA11 (ENSPCTG00005020249) SPESP1 (ENSPCTG00005020391) Blue whale MODERN SPECIES 11 DPP8 (ENSBMSG00010004802) HACD3 (ENSBMSG00010004707) INTS14 (ENSBMSG00010004651) SLC24A1 (ENSBMSG00010004497) #7 DENND4A (ENSBMSG00010004402) #11 RAB11A (ENSBMSG00010004363) #12 MEGF11 (ENSBMSG00010004218) #14 DIS3L (ENSBMSG00010004171) #15 ENSBMSG00010004151 #16 ENSBMSG00010004137 MAP2K1 (ENSBMSG00010004109) #17 ENSBMSG00010004081 #18 ENSBMSG00010004041 #19 ZWILCH (ENSBMSG00010004025) #20 LCTL (ENSBMSG00010003979) #21 SMAD6 (ENSBMSG00010003960) #22 SMAD3 (ENSBMSG00010003929) #23 AAGAB (ENSBMSG00010003912) #24 IQCH (ENSBMSG00010003720) #25 C15orf61 (ENSBMSG00010003681) MAP2K5 (ENSBMSG00010003598) SKOR1 (ENSBMSG00010003555) PIAS1 (ENSBMSG00010003520) CALML4 (ENSBMSG00010003507) CLN6 (ENSBMSG00010003453) FEM1B (ENSBMSG00010003441) ITGA11 (ENSBMSG00010003422) ENSBMSG00010003412 CORO2B (ENSBMSG00010003388) ENSBMSG00010003371 SPESP1 (ENSBMSG00010003359) Pecora ANCESTRAL SPECIES 6 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Yarkand deer MODERN SPECIES 3 INTS14 (ENSCHYG00000008447) SLC24A1 (ENSCHYG00000008613) #7 DENND4A (ENSCHYG00000008838) #11 ENSCHYG00000009117 ENSCHYG00000009145 #12 MEGF11 (ENSCHYG00000009296) #14 DIS3L (ENSCHYG00000010099) #15 TIPIN (ENSCHYG00000010297) #16 MAP2K1 (ENSCHYG00000010364) #17 ENSCHYG00000010432 SNAPC5 (ENSCHYG00000010450) #18 ENSCHYG00000010506 #19 ZWILCH (ENSCHYG00000010774) #20 LCTL (ENSCHYG00000011283) #21 ENSCHYG00000011323 SMAD6 (ENSCHYG00000011380) #22 SMAD3 (ENSCHYG00000011473) #23 AAGAB (ENSCHYG00000011610) #24 IQCH (ENSCHYG00000011825) #25 C15orf61 (ENSCHYG00000012160) MAP2K5 (ENSCHYG00000012261) SKOR1 (ENSCHYG00000013681) PIAS1 (ENSCHYG00000013992) CALML4 (ENSCHYG00000014198) CLN6 (ENSCHYG00000014290) FEM1B (ENSCHYG00000014524) ITGA11 (ENSCHYG00000014651) CORO2B (ENSCHYG00000016934) ENSCHYG00000017234 SPESP1 (ENSCHYG00000017531) NOX5 (ENSCHYG00000017570) Percora_a ANCESTRAL SPECIES 8 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Bovidae ANCESTRAL SPECIES 7 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Caprinae ANCESTRAL SPECIES 30 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.o #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Rambouillet Sheep MODERN SPECIES 23 IGDCC4 (ENSOARG00020005613) DPP8 (ENSOARG00020005690) HACD3 (ENSOARG00020005830) INTS14 (ENSOARG00020006021) SLC24A1 (ENSOARG00020006188) #7 DENND4A (ENSOARG00020006221) #11 ENSOARG00020006812 #12 MEGF11 (ENSOARG00020006928) #14 DIS3L (ENSOARG00020007756) #15 TIPIN (ENSOARG00020007825) #16 MAP2K1 (ENSOARG00020007890) #17 SNAPC5 (ENSOARG00020007973) #18 RPL4 (ENSOARG00020008040) #19 ZWILCH (ENSOARG00020008203) #20 LCTL (ENSOARG00020008384) #21 SMAD6 (ENSOARG00020008552) #22 SMAD3 (ENSOARG00020008589) #23 ENSOARG00020008703 #24 IQCH (ENSOARG00020008820) #25 C15orf61 (ENSOARG00020009584) MAP2K5 (ENSOARG00020009665) SKOR1 (ENSOARG00020010969) PIAS1 (ENSOARG00020011172) CALML4 (ENSOARG00020011634) CLN6 (ENSOARG00020011715) FEM1B (ENSOARG00020011984) ITGA11 (ENSOARG00020012015) CORO2B (ENSOARG00020012576) ENSOARG00020012822 SPESP1 (ENSOARG00020012911) NOX5 (ENSOARG00020012967) Goat MODERN SPECIES 1 HACD3 (ENSCHIG00000020855) INTS14 (ENSCHIG00000012971) SLC24A1 (ENSCHIG00000023644) #7 ENSCHIG00000015128 DENND4A (ENSCHIG00000024015) #11 ENSCHIG00000012183 #12 ENSCHIG00000006809 MEGF11 (ENSCHIG00000023140) #14 DIS3L (ENSCHIG00000009744) #15 ENSCHIG00000000481 #16 MAP2K1 (ENSCHIG00000021340) #17 SNAPC5 (ENSCHIG00000011315) #18 RPL4 (ENSCHIG00000012421) #19 ZWILCH (ENSCHIG00000015830) #20 LCTL (ENSCHIG00000017181) #21 SMAD6 (ENSCHIG00000012651) #22 SMAD3 (ENSCHIG00000013774) #23 ENSCHIG00000015028 #24 IQCH (ENSCHIG00000009034) #25 C15orf61 (ENSCHIG00000026630) MAP2K5 (ENSCHIG00000022039) SKOR1 (ENSCHIG00000017580) ENSCHIG00000010951 ENSCHIG00000003884 PIAS1 (ENSCHIG00000014001) CALML4 (ENSCHIG00000005207) CLN6 (ENSCHIG00000024128) FEM1B (ENSCHIG00000023393) ITGA11 (ENSCHIG00000025296) CORO2B (ENSCHIG00000023253) ENSCHIG00000011806 Bovinae ANCESTRAL SPECIES 33 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.ib #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Bos ANCESTRAL SPECIES 31 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.ib #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.e.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Bos_b ANCESTRAL SPECIES 28 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.ib #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.e.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Cow MODERN SPECIES 1 DPP8 (ENSBTAG00000014807) HACD3 (ENSBTAG00000015155) INTS14 (ENSBTAG00000015158) SLC24A1 (ENSBTAG00000025826) #7 DENND4A (ENSBTAG00000017095) #11 RAB11A (ENSBTAG00000018959) #12 MEGF11 (ENSBTAG00000034140) #14 DIS3L (ENSBTAG00000000371) #15 TIPIN (ENSBTAG00000000372) #16 MAP2K1 (ENSBTAG00000033983) #17 SNAPC5 (ENSBTAG00000005210) #18 RPL4 (ENSBTAG00000005211) #19 ZWILCH (ENSBTAG00000005213) #20 LCTL (ENSBTAG00000005214) #21 ENSBTAG00000050356 SMAD6 (ENSBTAG00000000625) #22 SMAD3 (ENSBTAG00000012599) #23 AAGAB (ENSBTAG00000040368) #24 IQCH (ENSBTAG00000013638) #25 C10H15orf61 (ENSBTAG00000045628) MAP2K5 (ENSBTAG00000000218) PIAS1 (ENSBTAG00000005564) CALML4 (ENSBTAG00000025822) CLN6 (ENSBTAG00000005565) FEM1B (ENSBTAG00000008378) ITGA11 (ENSBTAG00000008380) CORO2B (ENSBTAG00000012681) ANP32A (ENSBTAG00000012365) SPESP1 (ENSBTAG00000005994) NOX5 (ENSBTAG00000009030) GLCE (ENSBTAG00000001405) Hybrid Bos Indicus MODERN SPECIES 1 DPP8 (ENSBIXG00005007925) DENND4A (ENSBIXG00005007862) #11 HACD3 (ENSBIXG00005029324) INTS14 (ENSBIXG00005029402) SLC24A1 (ENSBIXG00005029443) #7 ENSBIXG00005029457 RAB11A (ENSBIXG00005029469) #12 MEGF11 (ENSBIXG00005029582) #14 DIS3L (ENSBIXG00005029839) #15 TIPIN (ENSBIXG00005029852) #16 ENSBIXG00005029869 #17 SNAPC5 (ENSBIXG00005029881) #18 ENSBIXG00005029889 #19 ZWILCH (ENSBIXG00005029921) #20 LCTL (ENSBIXG00005029961) #21 SMAD6 (ENSBIXG00005030012) #22 SMAD3 (ENSBIXG00005030065) #23 AAGAB (ENSBIXG00005030085) #24 IQCH (ENSBIXG00005030120) #25 C15orf61 (ENSBIXG00005030179) MAP2K5 (ENSBIXG00005030309) SKOR1 (ENSBIXG00005030471) PIAS1 (ENSBIXG00005030503) CALML4 (ENSBIXG00005030510) ENSBIXG00005030548 FEM1B (ENSBIXG00005030567) ITGA11 (ENSBIXG00005030585) CORO2B (ENSBIXG00005030625) ENSBIXG00005030667 SPESP1 (ENSBIXG00005030688) NOX5 (ENSBIXG00005030704) Bos_a ANCESTRAL SPECIES 40 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.xc.e.a #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00960000188521 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 Domestic yak MODERN SPECIES 2 DPP8 (ENSBGRG00000025360) HACD3 (ENSBGRG00000025307) INTS14 (ENSBGRG00000025180) SLC24A1 (ENSBGRG00000025095) #7 ENSBGRG00000025078 DENND4A (ENSBGRG00000024953) #11 ENSBGRG00000024884 #12 MEGF11 (ENSBGRG00000024819) #14 DIS3L (ENSBGRG00000024760) #15 TIPIN (ENSBGRG00000024730) #16 MAP2K1 (ENSBGRG00000024678) #17 SNAPC5 (ENSBGRG00000024649) #18 ENSBGRG00000024489 #19 ZWILCH (ENSBGRG00000024356) #20 LCTL (ENSBGRG00000024229) #21 SMAD6 (ENSBGRG00000024050) #22 SMAD3 (ENSBGRG00000023965) #23 AAGAB (ENSBGRG00000023783) #24 IQCH (ENSBGRG00000023490) #25 ENSBGRG00000023451 ENSBGRG00000023428 MAP2K5 (ENSBGRG00000023013) SKOR1 (ENSBGRG00000022855) PIAS1 (ENSBGRG00000022493) CALML4 (ENSBGRG00000022400) CLN6 (ENSBGRG00000022143) FEM1B (ENSBGRG00000022079) ITGA11 (ENSBGRG00000021881) CORO2B (ENSBGRG00000021747) ENSBGRG00000021463 ENSBGRG00000021382 Wild yak MODERN SPECIES 552 DIS3L (ENSBMUG00000005883) #15 TIPIN (ENSBMUG00000005904) #16 MAP2K1 (ENSBMUG00000005924) #17 SNAPC5 (ENSBMUG00000005936) #18 ENSBMUG00000005950 #19 ZWILCH (ENSBMUG00000006013) #20 LCTL (ENSBMUG00000006040) #21 ENSBMUG00000006090 #22 SMAD3 (ENSBMUG00000006115) #23 AAGAB (ENSBMUG00000006202) #24 IQCH (ENSBMUG00000006265) #25 ENSBMUG00000006346 MAP2K5 (ENSBMUG00000006406) SKOR1 (ENSBMUG00000006456) PIAS1 (ENSBMUG00000006486) CALML4 (ENSBMUG00000006499) CLN6 (ENSBMUG00000006571) FEM1B (ENSBMUG00000006589) ITGA11 (ENSBMUG00000006621) CORO2B (ENSBMUG00000006646) ENSBMUG00000006692 American bison MODERN SPECIES 2972 IGDCC4 (ENSBBBG00000009376) DPP8 (ENSBBBG00000001480) HACD3 (ENSBBBG00000009384) INTS14 (ENSBBBG00000001482) SLC24A1 (ENSBBBG00000009385) #7 DENND4A (ENSBBBG00000009388) #11 ENSBBBG00000001484 #12 MEGF11 (ENSBBBG00000009393) #14 DIS3L (ENSBBBG00000001485) #15 ENSBBBG00000009401 MAP2K1 (ENSBBBG00000009402) #17 SNAPC5 (ENSBBBG00000009405) #18 RPL4 (ENSBBBG00000009410) #19 ZWILCH (ENSBBBG00000007486) #20 LCTL (ENSBBBG00000009415) #21 SMAD6 (ENSBBBG00000001493) #22 SMAD3 (ENSBBBG00000009419) #23 AAGAB (ENSBBBG00000009422) #24 IQCH (ENSBBBG00000009426) #25 C15orf61 (ENSBBBG00000009428) MAP2K5 (ENSBBBG00000009430) PIAS1 (ENSBBBG00000009435) CALML4 (ENSBBBG00000009437) CLN6 (ENSBBBG00000001505) FEM1B (ENSBBBG00000009440) ITGA11 (ENSBBBG00000009443) CORO2B (ENSBBBG00000009445) ENSBBBG00000009447 SPESP1 (ENSBBBG00000001512) NOX5 (ENSBBBG00000009452) GLCE (ENSBBBG00000009453) Siberian musk deer MODERN SPECIES 70 ENSMMSG00000000445 HACD3 (ENSMMSG00000000485) INTS14 (ENSMMSG00000000581) SLC24A1 (ENSMMSG00000000735) #7 ENSMMSG00000000783 DENND4A (ENSMMSG00000000845) #11 ENSMMSG00000000971 #12 MEGF11 (ENSMMSG00000001023) #14 DIS3L (ENSMMSG00000001148) #15 TIPIN (ENSMMSG00000001178) #16 MAP2K1 (ENSMMSG00000001210) #17 SNAPC5 (ENSMMSG00000001249) #18 ENSMMSG00000001277 #19 ZWILCH (ENSMMSG00000001358) #20 LCTL (ENSMMSG00000001442) #21 SMAD6 (ENSMMSG00000001473) #22 SMAD3 (ENSMMSG00000001493) #23 AAGAB (ENSMMSG00000001517) #24 IQCH (ENSMMSG00000001575) #25 C15orf61 (ENSMMSG00000001796) MAP2K5 (ENSMMSG00000001850) SKOR1 (ENSMMSG00000002112) PIAS1 (ENSMMSG00000002174) CALML4 (ENSMMSG00000002206) CLN6 (ENSMMSG00000002230) FEM1B (ENSMMSG00000002327) ITGA11 (ENSMMSG00000002350) CORO2B (ENSMMSG00000002385) ENSMMSG00000002437 ENSMMSG00000002461 ENSMMSG00000002508 Laurasiatheria_b ANCESTRAL SPECIES 3 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00960000188521 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 Carnivora ANCESTRAL SPECIES ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Felidae ANCESTRAL SPECIES 1 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Panthera ANCESTRAL SPECIES 3 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Panthera_a ANCESTRAL SPECIES 15 ENSGT00530000063881.a.b ENSGT00940000154450 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00860000136046 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00910000146962 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b lion MODERN SPECIES 6 DPP8 (ENSPLOG00000010171) ENSPLOG00000010122 HACD3 (ENSPLOG00000009943) INTS14 (ENSPLOG00000009755) SLC24A1 (ENSPLOG00000009464) #7 DENND4A (ENSPLOG00000008717) #11 RAB11A (ENSPLOG00000008488) #12 MEGF11 (ENSPLOG00000008100) #14 DIS3L (ENSPLOG00000007929) #15 TIPIN (ENSPLOG00000007894) #16 MAP2K1 (ENSPLOG00000007836) #17 SNAPC5 (ENSPLOG00000007792) #18 RPL4 (ENSPLOG00000007707) #19 ZWILCH (ENSPLOG00000007600) #20 LCTL (ENSPLOG00000007528) #21 SMAD6 (ENSPLOG00000007495) #22 ENSPLOG00000007093 SMAD3 (ENSPLOG00000007068) #23 AAGAB (ENSPLOG00000007046) #24 IQCH (ENSPLOG00000006897) #25 C15orf61 (ENSPLOG00000006817) MAP2K5 (ENSPLOG00000006228) SKOR1 (ENSPLOG00000005020) PIAS1 (ENSPLOG00000004975) CALML4 (ENSPLOG00000004955) CLN6 (ENSPLOG00000004871) FEM1B (ENSPLOG00000004841) ITGA11 (ENSPLOG00000004793) CORO2B (ENSPLOG00000004744) ENSPLOG00000004724 SPESP1 (ENSPLOG00000004706) leopard MODERN SPECIES 7 DPP8 (ENSPPRG00000001353) ENSPPRG00000001945 HACD3 (ENSPPRG00000003107) INTS14 (ENSPPRG00000003935) SLC24A1 (ENSPPRG00000006682) #7 DENND4A (ENSPPRG00000009637) #11 RAB11A (ENSPPRG00000010471) #12 MEGF11 (ENSPPRG00000014069) #14 DIS3L (ENSPPRG00000019912) #15 TIPIN (ENSPPRG00000022554) #16 MAP2K1 (ENSPPRG00000022608) #17 SNAPC5 (ENSPPRG00000000465) #18 ENSPPRG00000000610 #19 ZWILCH (ENSPPRG00000001390) #20 LCTL (ENSPPRG00000002315) #21 SMAD6 (ENSPPRG00000002502) #22 SMAD3 (ENSPPRG00000003306) #23 AAGAB (ENSPPRG00000003564) #24 IQCH (ENSPPRG00000005647) #25 C15orf61 (ENSPPRG00000005929) ENSPPRG00000005987 MAP2K5 (ENSPPRG00000006923) SKOR1 (ENSPPRG00000007828) PIAS1 (ENSPPRG00000008695) CALML4 (ENSPPRG00000009014) CLN6 (ENSPPRG00000011593) FEM1B (ENSPPRG00000011995) ITGA11 (ENSPPRG00000014106) CORO2B (ENSPPRG00000015002) ENSPPRG00000015452 NOX5 (ENSPPRG00000020694) Cat MODERN SPECIES 237 IGDCC4 (ENSFCAG00000011466) DPP8 (ENSFCAG00000025415) HACD3 (ENSFCAG00000008691) INTS14 (ENSFCAG00000008692) SLC24A1 (ENSFCAG00000008693) #7 DENND4A (ENSFCAG00000008694) #11 RAB11A (ENSFCAG00000030174) #12 MEGF11 (ENSFCAG00000003091) #14 DIS3L (ENSFCAG00000029869) #15 TIPIN (ENSFCAG00000035191) #16 MAP2K1 (ENSFCAG00000028389) #17 SNAPC5 (ENSFCAG00000012291) #18 RPL4 (ENSFCAG00000012293) #19 ZWILCH (ENSFCAG00000012294) #20 LCTL (ENSFCAG00000012298) #21 SMAD6 (ENSFCAG00000012300) #22 SMAD3 (ENSFCAG00000027081) #23 AAGAB (ENSFCAG00000004418) #24 IQCH (ENSFCAG00000004419) #25 CB3H15orf61 (ENSFCAG00000040546) MAP2K5 (ENSFCAG00000004420) SKOR1 (ENSFCAG00000043709) PIAS1 (ENSFCAG00000018490) CALML4 (ENSFCAG00000006497) CLN6 (ENSFCAG00000025647) ENSFCAG00000049632 FEM1B (ENSFCAG00000045964) ITGA11 (ENSFCAG00000006499) CORO2B (ENSFCAG00000006500) ENSFCAG00000034954 SPESP1 (ENSFCAG00000048668) Caniformia ANCESTRAL SPECIES 12 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Caniformia_b ANCESTRAL SPECIES 15 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Ursidae ANCESTRAL SPECIES 21 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B.p #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Giant Panda MODERN SPECIES 15 IGDCC4 (ENSAMEG00000002889) DPP8 (ENSAMEG00000002924) HACD3 (ENSAMEG00000002983) INTS14 (ENSAMEG00000003002) SLC24A1 (ENSAMEG00000003029) #7 DENND4A (ENSAMEG00000003046) #11 RAB11A (ENSAMEG00000003119) #12 MEGF11 (ENSAMEG00000003131) #14 DIS3L (ENSAMEG00000003166) #15 TIPIN (ENSAMEG00000027725) #16 MAP2K1 (ENSAMEG00000003218) #17 SNAPC5 (ENSAMEG00000003249) #18 ENSAMEG00000029170 #19 ZWILCH (ENSAMEG00000003251) #20 LCTL (ENSAMEG00000003300) #21 SMAD6 (ENSAMEG00000029979) #22 SMAD3 (ENSAMEG00000003318) #23 AAGAB (ENSAMEG00000028433) #24 IQCH (ENSAMEG00000005044) #25 C15orf61 (ENSAMEG00000029099) MAP2K5 (ENSAMEG00000005013) SKOR1 (ENSAMEG00000004996) PIAS1 (ENSAMEG00000014025) CALML4 (ENSAMEG00000014054) CLN6 (ENSAMEG00000014058) FEM1B (ENSAMEG00000014073) ITGA11 (ENSAMEG00000014076) CORO2B (ENSAMEG00000014093) ENSAMEG00000014117 SPESP1 (ENSAMEG00000014134) NOX5 (ENSAMEG00000014136) Ursus ANCESTRAL SPECIES 37 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B.p #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 American black bear MODERN SPECIES 83 SMAD6 (ENSUAMG00000020556) #22 SMAD3 (ENSUAMG00000020554) #23 AAGAB (ENSUAMG00000020553) #24 IQCH (ENSUAMG00000020552) #25 C15orf61 (ENSUAMG00000020551) Mustelinae ANCESTRAL SPECIES 66 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 American mink MODERN SPECIES 46 IGDCC4 (ENSNVIG00000017489) DPP8 (ENSNVIG00000017340) HACD3 (ENSNVIG00000017259) CO044 (ENSNVIG00000017199) SLC24A1 (ENSNVIG00000017089) #7 DENND4A (ENSNVIG00000016862) #11 RAB11A (ENSNVIG00000016821) #12 MEGF11 (ENSNVIG00000016583) #14 DIS3L (ENSNVIG00000016535) #15 TIPIN (ENSNVIG00000016513) #16 MAP2K1 (ENSNVIG00000016498) #17 SNAPC5 (ENSNVIG00000016483) #18 RPL4 (ENSNVIG00000016412) #19 ZWILC (ENSNVIG00000016326) #20 LCTL (ENSNVIG00000016282) #21 SMAD6 (ENSNVIG00000016271) #22 SMAD3 (ENSNVIG00000016249) #23 AAGAB (ENSNVIG00000016212) #24 IQCH (ENSNVIG00000016136) #25 MP2K5 (ENSNVIG00000015958) SKOR1 (ENSNVIG00000015923) PIAS1 (ENSNVIG00000015868) CALML4 (ENSNVIG00000015844) CLN6 (ENSNVIG00000015741) FEM1B (ENSNVIG00000015730) ITGA11 (ENSNVIG00000015665) ENSNVIG00000015659 CORO2B (ENSNVIG00000015623) ENSNVIG00000015596 ENSNVIG00000015562 SPESP1 (ENSNVIG00000015552) Ferret MODERN SPECIES 228 DPP8 (ENSMPUG00000000480) HACD3 (ENSMPUG00000000475) INTS14 (ENSMPUG00000000472) SLC24A1 (ENSMPUG00000000468) #7 DENND4A (ENSMPUG00000000388) #11 RAB11A (ENSMPUG00000000387) #12 MEGF11 (ENSMPUG00000000383) #14 DIS3L (ENSMPUG00000000378) #15 TIPIN (ENSMPUG00000000365) #16 MAP2K1 (ENSMPUG00000000363) #17 SNAPC5 (ENSMPUG00000000356) #18 ENSMPUG00000000337 #19 ZWILCH (ENSMPUG00000000333) #20 LCTL (ENSMPUG00000000312) #21 ENSMPUG00000000309 SMAD6 (ENSMPUG00000000307) #22 SMAD3 (ENSMPUG00000000304) #23 AAGAB (ENSMPUG00000000292) #24 IQCH (ENSMPUG00000000289) #25 C15orf61 (ENSMPUG00000000287) MAP2K5 (ENSMPUG00000000285) SKOR1 (ENSMPUG00000000283) PIAS1 (ENSMPUG00000000281) CALML4 (ENSMPUG00000000270) CLN6 (ENSMPUG00000000267) FEM1B (ENSMPUG00000000266) ITGA11 (ENSMPUG00000000221) CORO2B (ENSMPUG00000000220) ENSMPUG00000000218 ENSMPUG00000000216 SPESP1 (ENSMPUG00000000214) Canidae ANCESTRAL SPECIES 15 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00950000185603 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218.m #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Canis_lupus ANCESTRAL SPECIES 17 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145.lc.a #19 ENSGT00390000013696 #20 ENSGT00950000185603 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218.m #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Dingo MODERN SPECIES 205 IGDCC4 (ENSCAFG00020008701) DPP8 (ENSCAFG00020008685) HACD3 (ENSCAFG00020008678) INTS14 (ENSCAFG00020008669) SLC24A1 (ENSCAFG00020008562) #7 DENND4A (ENSCAFG00020008501) #11 RAB11A (ENSCAFG00020008478) #12 MEGF11 (ENSCAFG00020008443) #14 DIS3L (ENSCAFG00020008413) #15 TIPIN (ENSCAFG00020008398) #16 MAP2K1 (ENSCAFG00020008392) #17 SNAPC5 (ENSCAFG00020008387) #18 ENSCAFG00020008355 #19 ZWILCH (ENSCAFG00020008215) #20 LCTL (ENSCAFG00020008195) #21 SMAD6 (ENSCAFG00020008193) #22 SMAD3 (ENSCAFG00020008177) #23 ENSCAFG00020008170 #24 IQCH (ENSCAFG00020008118) #25 C15orf61 (ENSCAFG00020008094) MAP2K5 (ENSCAFG00020008071) SKOR1 (ENSCAFG00020008049) PIAS1 (ENSCAFG00020008026) CALML4 (ENSCAFG00020008020) CLN6 (ENSCAFG00020008011) FEM1B (ENSCAFG00020008006) ITGA11 (ENSCAFG00020007730) CORO2B (ENSCAFG00020007691) ENSCAFG00020007674 ENSCAFG00020007670 SPESP1 (ENSCAFG00020007667) Dog MODERN SPECIES 23 HACD3 (ENSCAFG00845025953) INTS14 (ENSCAFG00845026081) SLC24A1 (ENSCAFG00845026323) #7 DENND4A (ENSCAFG00845026536) #11 RAB11A (ENSCAFG00845027320) #12 ENSCAFG00845014976 #14 DIS3L (ENSCAFG00845015076) #15 TIPIN (ENSCAFG00845015229) #16 ENSCAFG00845015268 MAP2K1 (ENSCAFG00845015371) #17 SNAPC5 (ENSCAFG00845015512) #18 RPL4 (ENSCAFG00845015609) #19 ZWILCH (ENSCAFG00845015845) #20 ENSCAFG00845016122 LCTL (ENSCAFG00845016168) #21 SMAD6 (ENSCAFG00845016415) #22 SMAD3 (ENSCAFG00845016639) #23 AAGAB (ENSCAFG00845016886) #24 IQCH (ENSCAFG00845017088) #25 C15orf61 (ENSCAFG00845017380) MAP2K5 (ENSCAFG00845017514) SKOR1 (ENSCAFG00845017976) PIAS1 (ENSCAFG00845018319) CALML4 (ENSCAFG00845018790) CLN6 (ENSCAFG00845018935) FEM1B (ENSCAFG00845019340) ITGA11 (ENSCAFG00845019410) CORO2B (ENSCAFG00845019590) ANP32A (ENSCAFG00845019800) SPESP1 (ENSCAFG00845019873) NOX5 (ENSCAFG00845020023) Red fox MODERN SPECIES INTS14 (ENSVVUG00000014296) SLC24A1 (ENSVVUG00000014313) #7 DENND4A (ENSVVUG00000014392) #11 RAB11A (ENSVVUG00000014435) #12 MEGF11 (ENSVVUG00000014448) #14 DIS3L (ENSVVUG00000014492) #15 TIPIN (ENSVVUG00000014501) #16 MAP2K1 (ENSVVUG00000014514) #17 SNAPC5 (ENSVVUG00000014527) #18 ENSVVUG00000014531 #19 ZWILCH (ENSVVUG00000014559) #20 ENSVVUG00000014578 LCTL (ENSVVUG00000014585) #21 ENSVVUG00000014612 ENSVVUG00000014615 SMAD6 (ENSVVUG00000014625) #22 SMAD3 (ENSVVUG00000014647) #23 AAGAB (ENSVVUG00000014658) #24 IQCH (ENSVVUG00000014665) #25 C15orf61 (ENSVVUG00000014693) MAP2K5 (ENSVVUG00000014703) ENSVVUG00000014708 PIAS1 (ENSVVUG00000014713) ENSVVUG00000014716 CLN6 (ENSVVUG00000014717) FEM1B (ENSVVUG00000014718) ITGA11 (ENSVVUG00000014719) CORO2B (ENSVVUG00000014724) ANP32A (ENSVVUG00000014726) SPESP1 (ENSVVUG00000014730) NOX5 (ENSVVUG00000014734) Laurasiatheria_c ANCESTRAL SPECIES 1 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.db.a #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Chiroptera ANCESTRAL SPECIES 17 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.db.a #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465.h ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Microchiroptera ANCESTRAL SPECIES 20 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.db.a #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00910000147041 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465.h ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Greater horseshoe bat MODERN SPECIES 24 DPP8 (ENSRFEG00010007043) HACD3 (ENSRFEG00010004527) INTS14 (ENSRFEG00010004454) SLC24A1 (ENSRFEG00010004368) #7 DENND4A (ENSRFEG00010004242) #11 ENSRFEG00010004168 #12 MEGF11 (ENSRFEG00010004126) #14 DIS3L (ENSRFEG00010004058) #15 TIPIN (ENSRFEG00010004026) #16 MAP2K1 (ENSRFEG00010004010) #17 SNAPC5 (ENSRFEG00010003999) #18 ENSRFEG00010003980 #19 ZWILCH (ENSRFEG00010003952) #20 LCTL (ENSRFEG00010003917) #21 ENSRFEG00010003900 SMAD6 (ENSRFEG00010003887) #22 SMAD3 (ENSRFEG00010003872) #23 AAGAB (ENSRFEG00010003850) #24 IQCH (ENSRFEG00010003782) #25 MAP2K5 (ENSRFEG00010003624) SKOR1 (ENSRFEG00010003500) ENSRFEG00010003474 ENSRFEG00010003431 ENSRFEG00010003398 CLN6 (ENSRFEG00010003356) FEM1B (ENSRFEG00010003282) ITGA11 (ENSRFEG00010003262) CORO2B (ENSRFEG00010003225) ENSRFEG00010003201 SPESP1 (ENSRFEG00010003175) ENSRFEG00010003165 Megabat MODERN SPECIES 7136 SMAD6 (ENSPVAG00000001721) #22 Equus ANCESTRAL SPECIES 4 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914.eb #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Horse MODERN SPECIES IGDCC3 (ENSECAG00000024763) IGDCC4 (ENSECAG00000024668) DPP8 (ENSECAG00000010846) HACD3 (ENSECAG00000023082) INTS14 (ENSECAG00000018884) SLC24A1 (ENSECAG00000013327) #7 DENND4A (ENSECAG00000024306) #11 RAB11A (ENSECAG00000023865) #12 MEGF11 (ENSECAG00000000706) #14 DIS3L (ENSECAG00000007302) #15 TIPIN (ENSECAG00000004590) #16 MAP2K1 (ENSECAG00000010640) #17 RPL4 (ENSECAG00000023179) #19 ZWILCH (ENSECAG00000018367) #20 LCTL (ENSECAG00000014254) #21 SMAD6 (ENSECAG00000013706) #22 SMAD3 (ENSECAG00000020259) #23 ENSECAG00000047849 #25 AAGAB (ENSECAG00000013142) #24 IQCH (ENSECAG00000007674) #25 ENSECAG00000029823 MAP2K5 (ENSECAG00000022411) SKOR1 (ENSECAG00000036584) ENSECAG00000005747 PIAS1 (ENSECAG00000007993) CALML4 (ENSECAG00000021844) CLN6 (ENSECAG00000016991) FEM1B (ENSECAG00000015587) ITGA11 (ENSECAG00000023104) CORO2B (ENSECAG00000014020) ENSECAG00000002541 Donkey MODERN SPECIES 11 IGDCC4 (ENSEASG00005006466) DPP8 (ENSEASG00005006459) HACD3 (ENSEASG00005006456) INTS14 (ENSEASG00005006454) SLC24A1 (ENSEASG00005006448) #7 DENND4A (ENSEASG00005006437) #11 RAB11A (ENSEASG00005006431) #12 MEGF11 (ENSEASG00005006429) #14 DIS3L (ENSEASG00005006407) #15 TIPIN (ENSEASG00005006396) #16 MAP2K1 (ENSEASG00005006387) #17 SNAPC5 (ENSEASG00005006384) #18 RPL4 (ENSEASG00005006373) #19 ZWILCH (ENSEASG00005006339) #20 LCTL (ENSEASG00005006319) #21 ENSEASG00005025450 #22 SMAD3 (ENSEASG00005006315) #23 AAGAB (ENSEASG00005006311) #24 IQCH (ENSEASG00005006301) #25 ENSEASG00005006297 MAP2K5 (ENSEASG00005006290) SKOR1 (ENSEASG00005006277) ENSEASG00005006267 PIAS1 (ENSEASG00005006262) CALML4 (ENSEASG00005033729) CLN6 (ENSEASG00005034200) FEM1B (ENSEASG00005006255) ITGA11 (ENSEASG00005006251) CORO2B (ENSEASG00005006245) ENSEASG00005006243 SPESP1 (ENSEASG00005028304) Atlantogenata ANCESTRAL SPECIES 2 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00390000005362 ENSGT00940000162591 Xenarthra ANCESTRAL SPECIES 230 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 Armadillo MODERN SPECIES 984 IGDCC4 (ENSDNOG00000015741) DPP8 (ENSDNOG00000001444) HACD3 (ENSDNOG00000001687) INTS14 (ENSDNOG00000001690) SLC24A1 (ENSDNOG00000000816) #7 DENND4A (ENSDNOG00000019872) #11 ENSDNOG00000038479 #12 MEGF11 (ENSDNOG00000016951) #14 DIS3L (ENSDNOG00000016967) #15 TIPIN (ENSDNOG00000003177) #16 MAP2K1 (ENSDNOG00000016563) #17 ENSDNOG00000006689 #18 ENSDNOG00000006693 #19 ZWILCH (ENSDNOG00000006711) #20 LCTL (ENSDNOG00000006740) #21 SMAD6 (ENSDNOG00000008227) #22 Afrotheria ANCESTRAL SPECIES 58 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 Afrotheria_a ANCESTRAL SPECIES 56 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 Elephant MODERN SPECIES 466 PARP16 (ENSLAFG00000014938) IGDCC3 (ENSLAFG00000000244) IGDCC4 (ENSLAFG00000022955) DPP8 (ENSLAFG00000013000) HACD3 (ENSLAFG00000010226) INTS14 (ENSLAFG00000010235) DENND4A (ENSLAFG00000010247) #11 RAB11A (ENSLAFG00000011418) #12 MEGF11 (ENSLAFG00000011424) #14 DIS3L (ENSLAFG00000006866) #15 TIPIN (ENSLAFG00000026016) #16 MAP2K1 (ENSLAFG00000006487) #17 SNAPC5 (ENSLAFG00000006491) #18 RPL4 (ENSLAFG00000006494) #19 LCTL (ENSLAFG00000012306) #21 SMAD6 (ENSLAFG00000013285) #22 SMAD3 (ENSLAFG00000021903) #23 AAGAB (ENSLAFG00000022590) #24 IQCH (ENSLAFG00000011381) #25 C15orf61 (ENSLAFG00000000737) MAP2K5 (ENSLAFG00000001427) SKOR1 (ENSLAFG00000018189) ENSLAFG00000029244 PIAS1 (ENSLAFG00000018150) CALML4 (ENSLAFG00000021943) CLN6 (ENSLAFG00000029055) FEM1B (ENSLAFG00000013998) ITGA11 (ENSLAFG00000018505) Hyrax MODERN SPECIES 8519 SMAD6 (ENSPCAG00000004267) #22 Tenrec MODERN SPECIES 3388 SMAD6 (ENSETEG00000006896) #22 Marsupialia ANCESTRAL SPECIES ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Diprotodontia ANCESTRAL SPECIES ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Diprotodontia_a ANCESTRAL SPECIES 1 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 koala MODERN SPECIES IGDCC4 (ENSPCIG00000024106) DPP8 (ENSPCIG00000024105) HACD3 (ENSPCIG00000008851) INTS14 (ENSPCIG00000008852) ENSPCIG00000008854 #7 DENND4A (ENSPCIG00000006919) #11 RAB11A (ENSPCIG00000006878) #12 MEGF11 (ENSPCIG00000006843) #14 DIS3L (ENSPCIG00000006827) #15 TIPIN (ENSPCIG00000006818) #16 MAP2K1 (ENSPCIG00000006816) #17 ENSPCIG00000006812 #18 RPL4 (ENSPCIG00000006799) #19 ZWILCH (ENSPCIG00000006798) #20 LCTL (ENSPCIG00000006796) #21 SMAD6 (ENSPCIG00000006792) #22 SMAD3 (ENSPCIG00000014066) #23 AAGAB (ENSPCIG00000014065) #24 IQCH (ENSPCIG00000023221) #25 C15orf61 (ENSPCIG00000023229) MAP2K5 (ENSPCIG00000023233) SKOR1 (ENSPCIG00000023240) PIAS1 (ENSPCIG00000023245) CALML4 (ENSPCIG00000023241) CLN6 (ENSPCIG00000023237) ENSPCIG00000023218 ITGA11 (ENSPCIG00000023209) CORO2B (ENSPCIG00000023206) ENSPCIG00000023204 NOX5 (ENSPCIG00000013880) GLCE (ENSPCIG00000013869) Common wonbat MODERN SPECIES 581 IGDCC4 (ENSVURG00010016817) DPP8 (ENSVURG00010016847) HACD3 (ENSVURG00010016877) INTS14 (ENSVURG00010016912) ENSVURG00010017031 #7 DENND4A (ENSVURG00010017069) #11 RAB11A (ENSVURG00010017156) #12 MEGF11 (ENSVURG00010017205) #14 DIS3L (ENSVURG00010017304) #15 TIPIN (ENSVURG00010017324) #16 MAP2K1 (ENSVURG00010017352) #17 SNAPC5 (ENSVURG00010017361) #18 RPL4 (ENSVURG00010017371) #19 ZWILCH (ENSVURG00010017403) #20 LCTL (ENSVURG00010017479) #21 SMAD6 (ENSVURG00010017499) #22 SMAD3 (ENSVURG00010017513) #23 AAGAB (ENSVURG00010017532) #24 IQCH (ENSVURG00010017554) #25 ENSVURG00010017577 C15orf61 (ENSVURG00010017585) MAP2K5 (ENSVURG00010017619) SKOR1 (ENSVURG00010017727) PIAS1 (ENSVURG00010017756) CALML4 (ENSVURG00010017772) CLN6 (ENSVURG00010017776) FEM1B (ENSVURG00010017788) ITGA11 (ENSVURG00010017821) CORO2B (ENSVURG00010018179) ENSVURG00010018193 NOX5 (ENSVURG00010018209) Wallaby MODERN SPECIES 4464 SMAD6 (ENSMEUG00000009103) #22 Tasmanian devil MODERN SPECIES 1 IGDCC4 (ENSSHAG00000012686) DPP8 (ENSSHAG00000012989) HACD3 (ENSSHAG00000013349) INTS14 (ENSSHAG00000013462) SLC24A1 (ENSSHAG00000013623) #7 DENND4A (ENSSHAG00000002367) #11 RAB11A (ENSSHAG00000006622) #12 MEGF11 (ENSSHAG00000006869) #14 DIS3L (ENSSHAG00000010970) #15 TIPIN (ENSSHAG00000011237) #16 MAP2K1 (ENSSHAG00000029460) #17 SNAPC5 (ENSSHAG00000025154) #18 RPL4 (ENSSHAG00000002421) #19 ZWILCH (ENSSHAG00000002622) #20 LCTL (ENSSHAG00000003461) #21 SMAD6 (ENSSHAG00000007962) #22 SMAD3 (ENSSHAG00000023904) #23 AAGAB (ENSSHAG00000012729) #24 IQCH (ENSSHAG00000012985) #25 C15orf61 (ENSSHAG00000031222) MAP2K5 (ENSSHAG00000014400) SKOR1 (ENSSHAG00000027578) PIAS1 (ENSSHAG00000022295) CALML4 (ENSSHAG00000028912) ENSSHAG00000003272 FEM1B (ENSSHAG00000030104) ITGA11 (ENSSHAG00000005006) CORO2B (ENSSHAG00000009104) ENSSHAG00000010906 NOX5 (ENSSHAG00000012412) GLCE (ENSSHAG00000023440) Opossum MODERN SPECIES DPP8 (ENSMODG00000010208) HACD3 (ENSMODG00000009893) INTS14 (ENSMODG00000009876) SLC24A1 (ENSMODG00000009861) #7 DENND4A (ENSMODG00000009838) #11 RAB11A (ENSMODG00000009810) #12 MEGF11 (ENSMODG00000009795) #14 DIS3L (ENSMODG00000009760) #15 TIPIN (ENSMODG00000009724) #16 ENSMODG00000039883 MAP2K1 (ENSMODG00000009715) #17 ENSMODG00000025470 #18 RPL4 (ENSMODG00000009657) #19 ZWILCH (ENSMODG00000009648) #20 LCTL (ENSMODG00000009632) #21 SMAD6 (ENSMODG00000009620) #22 SMAD3 (ENSMODG00000038564) #23 ENSMODG00000009585 #24 ENSMODG00000009566 #25 C15orf61 (ENSMODG00000036723) MAP2K5 (ENSMODG00000009527) SKOR1 (ENSMODG00000024583) PIAS1 (ENSMODG00000009467) CALML4 (ENSMODG00000009430) CLN6 (ENSMODG00000009425) FEM1B (ENSMODG00000051021) ITGA11 (ENSMODG00000009413) ENSMODG00000040904 CORO2B (ENSMODG00000009371) ENSMODG00000009359 NOX5 (ENSMODG00000009308) Platypus MODERN SPECIES 16 IGDCC4 (ENSOANG00000011112) DPP8 (ENSOANG00000008346) ENSOANG00000046972 INTS14 (ENSOANG00000001669) ENSOANG00000043682 #7 DENND4A (ENSOANG00000044994) #11 RAB11A (ENSOANG00000038794) #12 MEGF11 (ENSOANG00000037204) #14 DIS3L (ENSOANG00000009753) #15 TIPIN (ENSOANG00000048848) #16 MAP2K1 (ENSOANG00000009750) #17 SNAPC5 (ENSOANG00000039654) #18 RPL4 (ENSOANG00000048650) #19 ZWILCH (ENSOANG00000004555) #20 LCTL (ENSOANG00000004554) #21 SMAD6 (ENSOANG00000042174) #22 SMAD3 (ENSOANG00000037003) #23 AAGAB (ENSOANG00000046695) #24 ENSOANG00000013556 #25 C15orf61 (ENSOANG00000042403) MAP2K5 (ENSOANG00000013555) SKOR1 (ENSOANG00000041839) PIAS1 (ENSOANG00000013547) CALML4 (ENSOANG00000036767) CLN6 (ENSOANG00000044196) ENSOANG00000013544 ITGA11 (ENSOANG00000013543) CORO2B (ENSOANG00000013538) ENSOANG00000048109 ENSOANG00000013537 NOX5 (ENSOANG00000012494) Sauria ANCESTRAL SPECIES 10 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Lepidosauria ANCESTRAL SPECIES 19 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 tuatara MODERN SPECIES 842 ENSSPUG00000013730 #11 ENSSPUG00000013724 #11 ENSSPUG00000013716 #11 ENSSPUG00000013706 #11 RAB11A (ENSSPUG00000013698) #12 MEGF11 (ENSSPUG00000013679) #14 DIS3L (ENSSPUG00000013652) #15 TIPIN (ENSSPUG00000013622) #16 MAP2K1 (ENSSPUG00000013607) #17 SNAPC5 (ENSSPUG00000013599) #18 RPL4 (ENSSPUG00000013570) #19 ENSSPUG00000013505 #20 LCTL (ENSSPUG00000013481) #21 SMAD6 (ENSSPUG00000013465) #22 SMAD3 (ENSSPUG00000013429) #23 AAGAB (ENSSPUG00000013388) #24 C15orf61 (ENSSPUG00000013351) MAP2K5 (ENSSPUG00000013303) PIAS1 (ENSSPUG00000013205) CALML4 (ENSSPUG00000013190) CLN6 (ENSSPUG00000013176) ENSSPUG00000013166 ITGA11 (ENSSPUG00000013143) CORO2B (ENSSPUG00000013122) ENSSPUG00000013106 NOX5 (ENSSPUG00000013079) GLCE (ENSSPUG00000013062) PAQR5 (ENSSPUG00000013045) KIF23 (ENSSPUG00000012998) Episquamata ANCESTRAL SPECIES 9 ENSGT00950000183129.a ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Laterata ANCESTRAL SPECIES 16 ENSGT00950000183129.a ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 7 ENSPMRG00000015406 IL6R (ENSPMRG00000015769) SHE (ENSPMRG00000015789) TDRD10 (ENSPMRG00000015796) UBE2Q1 (ENSPMRG00000015807) CHRNB2 (ENSPMRG00000015817) ADAR (ENSPMRG00000015826) KCNN3 (ENSPMRG00000015860) PMVK (ENSPMRG00000015873) PBXIP1 (ENSPMRG00000015884) PYGO2 (ENSPMRG00000015899) SHC1 (ENSPMRG00000015905) CKS1B (ENSPMRG00000015922) FLAD1 (ENSPMRG00000015930) ENSPMRG00000015939 ENSPMRG00000015945 #22 ZBTB7B (ENSPMRG00000015953) ENSPMRG00000015965 ENSPMRG00000015976 ADAM15 (ENSPMRG00000015997) EFNA4 (ENSPMRG00000016031) EFNA3 (ENSPMRG00000016035) ENSPMRG00000016044 SLC50A1 (ENSPMRG00000016053) DPM3 (ENSPMRG00000016060) KRTCAP2 (ENSPMRG00000016066) TRIM46 (ENSPMRG00000016070) ENSPMRG00000016083 THBS3 (ENSPMRG00000016198) ENSPMRG00000016793 ENSPMRG00000016807 Common wall lizard MODERN SPECIES 5 ENSPMRG00000014139 ENSPMRG00000014144 HACD3 (ENSPMRG00000014152) INTS14 (ENSPMRG00000014159) DENND4A (ENSPMRG00000014169) #11 RAB11A (ENSPMRG00000014183) #12 MEGF11 (ENSPMRG00000014263) #14 ENSPMRG00000014534 ENSPMRG00000014537 DIS3L (ENSPMRG00000014540) #15 TIPIN (ENSPMRG00000014546) #16 MAP2K1 (ENSPMRG00000014555) #17 SNAPC5 (ENSPMRG00000014563) #18 RPL4 (ENSPMRG00000014570) #19 ZWILCH (ENSPMRG00000014603) #20 SMAD6 (ENSPMRG00000014612) #22 ENSPMRG00000014621 #23 AAGAB (ENSPMRG00000014629) #24 IQCH (ENSPMRG00000014635) #25 C15orf61 (ENSPMRG00000014653) MAP2K5 (ENSPMRG00000014661) SKOR1 (ENSPMRG00000014676) PIAS1 (ENSPMRG00000014688) CALML4 (ENSPMRG00000014698) CLN6 (ENSPMRG00000014706) ENSPMRG00000014712 ENSPMRG00000014717 ITGA11 (ENSPMRG00000014723) CORO2B (ENSPMRG00000014736) ENSPMRG00000014760 NOX5 (ENSPMRG00000014775) Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 78 CKS1B (ENSSMRG00000011890) FLAD1 (ENSSMRG00000011889) ENSSMRG00000011888 ENSSMRG00000011887 #22 ZBTB7B (ENSSMRG00000011886) ENSSMRG00000011885 ADAM15 (ENSSMRG00000011884) EFNA4 (ENSSMRG00000011883) EFNA3 (ENSSMRG00000011871) EFNA1 (ENSSMRG00000011870) SLC50A1 (ENSSMRG00000011868) DPM3 (ENSSMRG00000011867) ENSSMRG00000011866 TRIM46 (ENSSMRG00000011864) THBS3 (ENSSMRG00000011858) MTX1 (ENSSMRG00000011857) ENSSMRG00000011856 RIT1 (ENSSMRG00000011855) SYT11 (ENSSMRG00000011854) Argentine black and white tegu MODERN SPECIES 46 PARP16 (ENSSMRG00000021595) IGDCC3 (ENSSMRG00000021594) IGDCC4 (ENSSMRG00000021593) DPP8 (ENSSMRG00000021592) HACD3 (ENSSMRG00000021591) INTS14 (ENSSMRG00000021590) DENND4A (ENSSMRG00000021589) #11 RAB11A (ENSSMRG00000021588) #12 MEGF11 (ENSSMRG00000021585) #14 DIS3L (ENSSMRG00000021584) #15 TIPIN (ENSSMRG00000021582) #16 MAP2K1 (ENSSMRG00000021581) #17 SNAPC5 (ENSSMRG00000021580) #18 RPL4 (ENSSMRG00000021574) #19 ZWILCH (ENSSMRG00000021573) #20 SMAD6 (ENSSMRG00000021572) #22 SMAD3 (ENSSMRG00000021571) #23 AAGAB (ENSSMRG00000021570) #24 IQCH (ENSSMRG00000021569) #25 C15orf61 (ENSSMRG00000021568) MAP2K5 (ENSSMRG00000021567) SKOR1 (ENSSMRG00000021566) PIAS1 (ENSSMRG00000021565) CALML4 (ENSSMRG00000021564) CLN6 (ENSSMRG00000021563) ENSSMRG00000021562 ITGA11 (ENSSMRG00000021561) CORO2B (ENSSMRG00000021560) ENSSMRG00000021559 NOX5 (ENSSMRG00000021557) GLCE (ENSSMRG00000021556) Toxicofera ANCESTRAL SPECIES 40 ENSGT00950000183129.a ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465.c ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Lizard MODERN SPECIES 1079 ENSACAG00000005016 ENSACAG00000004994 RPL4 (ENSACAG00000009759) #19 ZWILCH (ENSACAG00000009844) #20 SMAD6 (ENSACAG00000009899) #22 SMAD3 (ENSACAG00000009914) #23 AAGAB (ENSACAG00000010006) #24 IQCH (ENSACAG00000010052) #25 C15orf61 (ENSACAG00000038258) MAP2K5 (ENSACAG00000010072) PIAS1 (ENSACAG00000010183) CALML4 (ENSACAG00000010259) CLN6 (ENSACAG00000010272) FEM1B (ENSACAG00000001361) Elapidae ANCESTRAL SPECIES 12 ENSGT00510000048902.b ENSGT00940000156682 ENSGT00940000159268.d ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b.d #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000164138 ENSGT00940000155465.c ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Indian cobra MODERN SPECIES 14 ENSNNAG00000004785 IGF1R (ENSNNAG00000004949) SYNM (ENSNNAG00000007433) DPP8 (ENSNNAG00000007591) HACD3 (ENSNNAG00000009979) INTS14 (ENSNNAG00000010021) DENND4A (ENSNNAG00000010330) #11 RAB11A (ENSNNAG00000010435) #12 MEGF11 (ENSNNAG00000010468) #14 DIS3L (ENSNNAG00000010799) #15 TIPIN (ENSNNAG00000010924) #16 MAP2K1 (ENSNNAG00000010963) #17 SNAPC5 (ENSNNAG00000011012) #18 RPL4 (ENSNNAG00000011026) #19 ZWILCH (ENSNNAG00000011099) #20 SMAD6 (ENSNNAG00000011230) #22 SMAD3 (ENSNNAG00000011272) #23 AAGAB (ENSNNAG00000011287) #24 ENSNNAG00000011356 IQCH (ENSNNAG00000011412) #25 C15orf61 (ENSNNAG00000011603) MAP2K5 (ENSNNAG00000011631) SKOR1 (ENSNNAG00000011796) PIAS1 (ENSNNAG00000012101) CLN6 (ENSNNAG00000012206) ENSNNAG00000012296 ITGA11 (ENSNNAG00000012334) CORO2B (ENSNNAG00000012805) ENSNNAG00000012830 NOX5 (ENSNNAG00000012871) GLCE (ENSNNAG00000012927) Elapidae_a ANCESTRAL SPECIES 114 ENSGT00950000182904.a.a.a ENSGT00390000014801 ENSGT00940000162147 ENSGT00530000063948.a ENSGT00950000182870.a.a.b ENSGT00950000182971.B.b ENSGT00390000007266 ENSGT00940000158146 #22 ENSGT00940000160219 ENSGT00940000153269.a.b ENSGT00940000162071 ENSGT00940000161355 ENSGT00940000159919 ENSGT00390000007801 ENSGT00390000008892 ENSGT00390000003552 ENSGT00940000158021 ENSGT01030000235260 ENSGT00940000159283.d ENSGT00950000182919.B.a ENSGT00390000009464.j ENSGT00390000009464.i.b ENSGT00390000009464.i.a Blue-lipped sea krait MODERN SPECIES 6456 CKS1B (ENSLLTG00000003633) FLAD1 (ENSLLTG00000003615) SMAD6 (ENSLLTG00000003605) #22 Acanthophiinae ANCESTRAL SPECIES 107 ENSGT00950000182904.a.a.a ENSGT00390000014801 ENSGT00530000063948.a ENSGT00950000182870.a.a.b ENSGT00950000182971.B.b ENSGT00390000007266 ENSGT00940000158146 #22 ENSGT00940000160219 ENSGT00940000153269.a.b ENSGT00940000162071 ENSGT00940000161355 ENSGT00940000159919 ENSGT00940000159283.d ENSGT00950000182919.B.a ENSGT00390000009464.j ENSGT00940000160917 ENSGT00940000154947 ENSGT00960000192064 ENSGT00940000154743.A.b ENSGT00900000141074 ENSGT00900000141033.b.b.db ENSGT00940000156698 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 85 KCNN3 (ENSPTXG00000008402) ENSPTXG00000008433 PYGO2 (ENSPTXG00000008435) SHC1 (ENSPTXG00000008436) CKS1B (ENSPTXG00000008438) FLAD1 (ENSPTXG00000008440) ENSPTXG00000008441 #22 ZBTB7B (ENSPTXG00000008442) ENSPTXG00000008443 ENSPTXG00000008445 EFNA4 (ENSPTXG00000008446) EFNA3 (ENSPTXG00000008447) EFNA1 (ENSPTXG00000008448) THBS3 (ENSPTXG00000008469) MTX1 (ENSPTXG00000009253) ENSPTXG00000009258 ENSPTXG00000009297 ENSPTXG00000009299 FDPS (ENSPTXG00000009300) ENSPTXG00000009302 ENSPTXG00000009304 ASH1L (ENSPTXG00000009306) Eastern brown snake MODERN SPECIES 43 NR2F2 (ENSPTXG00000015588) ARRDC4 (ENSPTXG00000015586) IGF1R (ENSPTXG00000015585) SYNM (ENSPTXG00000015583) DPP8 (ENSPTXG00000015569) HACD3 (ENSPTXG00000015568) INTS14 (ENSPTXG00000015567) DENND4A (ENSPTXG00000015565) #11 RAB11A (ENSPTXG00000015564) #12 MEGF11 (ENSPTXG00000015560) #14 DIS3L (ENSPTXG00000015557) #15 TIPIN (ENSPTXG00000015555) #16 MAP2K1 (ENSPTXG00000015554) #17 SNAPC5 (ENSPTXG00000015552) #18 RPL4 (ENSPTXG00000015545) #19 SMAD6 (ENSPTXG00000015543) #22 SMAD3 (ENSPTXG00000015540) #23 AAGAB (ENSPTXG00000015539) #24 IQCH (ENSPTXG00000015536) #25 C15orf61 (ENSPTXG00000015534) MAP2K5 (ENSPTXG00000015531) ENSPTXG00000015529 PIAS1 (ENSPTXG00000015528) CALML4 (ENSPTXG00000015527) CLN6 (ENSPTXG00000015526) ENSPTXG00000015525 ITGA11 (ENSPTXG00000015524) CORO2B (ENSPTXG00000015523) ENSPTXG00000015522 NOX5 (ENSPTXG00000015521) GLCE (ENSPTXG00000015519) Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 2040 ENSNSUG00000001665 #22 Mainland tiger snake MODERN SPECIES 1891 SMAD6 (ENSNSUG00000000757) #22 Archelosauria ANCESTRAL SPECIES 13 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Cryptodira ANCESTRAL SPECIES 13 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Testudinoidea ANCESTRAL SPECIES 6 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Testudinidae ANCESTRAL SPECIES 3 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00960000193170 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00950000186456 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1412 ENSCABG00000018316 ENSCABG00000018317 ENSCABG00000018319 ENSCABG00000018320 SNCB (ENSCABG00000018321) EIF4E1B (ENSCABG00000018331) CHRNB2 (ENSCABG00000000073) ADAR (ENSCABG00000000100) KCNN3 (ENSCABG00000000129) PMVK (ENSCABG00000000174) PYGO2 (ENSCABG00000000209) SHC1 (ENSCABG00000000215) CKS1B (ENSCABG00000000232) FLAD1 (ENSCABG00000000244) ENSCABG00000000252 ENSCABG00000000266 #22 ENSCABG00000000283 ENSCABG00000000292 ENSCABG00000000301 ADAM15 (ENSCABG00000000324) EFNA3 (ENSCABG00000000703) EFNA1 (ENSCABG00000000712) SLC50A1 (ENSCABG00000000714) DPM3 (ENSCABG00000000716) KRTCAP2 (ENSCABG00000000719) TRIM46 (ENSCABG00000000725) Abingdon island giant tortoise MODERN SPECIES 2548 DPP8 (ENSCABG00000013708) HACD3 (ENSCABG00000015923) INTS14 (ENSCABG00000015930) SLC24A1 (ENSCABG00000015939) #7 DENND4A (ENSCABG00000015963) #11 RAB11A (ENSCABG00000016119) #12 MEGF11 (ENSCABG00000016122) #14 ENSCABG00000016124 DIS3L (ENSCABG00000016126) #15 TIPIN (ENSCABG00000016127) #16 MAP2K1 (ENSCABG00000016130) #17 SNAPC5 (ENSCABG00000016133) #18 RPL4 (ENSCABG00000016134) #19 ZWILCH (ENSCABG00000016148) #20 LCTL (ENSCABG00000016203) #21 SMAD6 (ENSCABG00000016207) #22 Goode s thornscrub tortoise DUPLICATION Goode s thornscrub tortoise MODERN SPECIES 16 ATP8B2 (ENSGEVG00005013340) IL6R (ENSGEVG00005013288) SHE (ENSGEVG00005013259) TDRD10 (ENSGEVG00005013230) UBE2Q1 (ENSGEVG00005013160) CHRNB2 (ENSGEVG00005012987) ADAR (ENSGEVG00005012932) KCNN3 (ENSGEVG00005012128) PMVK (ENSGEVG00005012009) PBXIP1 (ENSGEVG00005011960) PYGO2 (ENSGEVG00005011920) SHC1 (ENSGEVG00005011859) CKS1B (ENSGEVG00005011816) FLAD1 (ENSGEVG00005011782) ENSGEVG00005011744 ENSGEVG00005011612 #22 ZBTB7B (ENSGEVG00005011581) DCST1 (ENSGEVG00005011376) ADAM15 (ENSGEVG00005010942) EFNA4 (ENSGEVG00005010841) EFNA3 (ENSGEVG00005010665) EFNA1 (ENSGEVG00005010581) ENSGEVG00005010525 ENSGEVG00005010499 ENSGEVG00005010468 ENSGEVG00005010098 ENSGEVG00005009928 ENSGEVG00005009868 ENSGEVG00005009385 ENSGEVG00005009279 ENSGEVG00005008726 Goode s thornscrub tortoise MODERN SPECIES 1 DPP8 (ENSGEVG00005006156) HACD3 (ENSGEVG00005006129) INTS14 (ENSGEVG00005006084) SLC24A1 (ENSGEVG00005006015) #7 DENND4A (ENSGEVG00005005910) #11 RAB11A (ENSGEVG00005005859) #12 ENSGEVG00005005833 MEGF11 (ENSGEVG00005005633) #14 DIS3L (ENSGEVG00005005574) #15 TIPIN (ENSGEVG00005005547) #16 MAP2K1 (ENSGEVG00005005509) #17 SNAPC5 (ENSGEVG00005005478) #18 RPL4 (ENSGEVG00005005421) #19 ZWILCH (ENSGEVG00005005317) #20 LCTL (ENSGEVG00005005207) #21 SMAD6 (ENSGEVG00005005184) #22 SMAD3 (ENSGEVG00005005160) #23 AAGAB (ENSGEVG00005005135) #24 ENSGEVG00005005107 IQCH (ENSGEVG00005005068) #25 C15orf61 (ENSGEVG00005005051) MAP2K5 (ENSGEVG00005004903) SKOR1 (ENSGEVG00005004798) PIAS1 (ENSGEVG00005004663) CALML4 (ENSGEVG00005004576) CLN6 (ENSGEVG00005004545) FEM1B (ENSGEVG00005004527) ITGA11 (ENSGEVG00005004365) CORO2B (ENSGEVG00005004248) ENSGEVG00005004193 NOX5 (ENSGEVG00005004166) Emydidae ANCESTRAL SPECIES 21 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764.b #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 painted turtle DUPLICATION painted turtle MODERN SPECIES 785 EFNA1 (ENSCPBG00000025674) SLC50A1 (ENSCPBG00000025673) DPM3 (ENSCPBG00000025671) KRTCAP2 (ENSCPBG00000025670) TRIM46 (ENSCPBG00000025667) ENSCPBG00000025664 ENSCPBG00000025662 KCNN3 (ENSCPBG00000025660) PMVK (ENSCPBG00000025658) ENSCPBG00000025655 PYGO2 (ENSCPBG00000025651) CKS1B (ENSCPBG00000025650) SHC1 (ENSCPBG00000025647) FLAD1 (ENSCPBG00000025645) ENSCPBG00000025644 ENSCPBG00000025642 #22 ZBTB7B (ENSCPBG00000025637) ENSCPBG00000025634 ENSCPBG00000025632 ADAM15 (ENSCPBG00000025629) VANGL2 (ENSCPBG00000025627) NHLH1 (ENSCPBG00000025626) NCSTN (ENSCPBG00000025459) COPA (ENSCPBG00000025456) S100A11 (ENSCPBG00000025455) ENSCPBG00000025454 ENSCPBG00000025453 ENSCPBG00000025451 ENSCPBG00000025450 ENSCPBG00000025449 ENSCPBG00000025447 painted turtle MODERN SPECIES 742 SMAD6 (ENSCPBG00000025564) #22 SMAD3 (ENSCPBG00000025562) #23 AAGAB (ENSCPBG00000025560) #24 IQCH (ENSCPBG00000025554) #25 C15orf61 (ENSCPBG00000025551) MAP2K5 (ENSCPBG00000025545) SKOR1 (ENSCPBG00000025542) PIAS1 (ENSCPBG00000025540) CALML4 (ENSCPBG00000025539) CLN6 (ENSCPBG00000025538) FEM1B (ENSCPBG00000025536) ITGA11 (ENSCPBG00000025526) CORO2B (ENSCPBG00000025523) ENSCPBG00000025519 NOX5 (ENSCPBG00000025517) GLCE (ENSCPBG00000025514) Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 1002 ENSTMTG00000009036 #22 Three-toed box turtle MODERN SPECIES 27 IGDCC4 (ENSTMTG00000007233) DPP8 (ENSTMTG00000007513) HACD3 (ENSTMTG00000007567) INTS14 (ENSTMTG00000007590) SLC24A1 (ENSTMTG00000007638) #7 DENND4A (ENSTMTG00000007680) #11 RAB11A (ENSTMTG00000007735) #12 MEGF11 (ENSTMTG00000007756) #14 DIS3L (ENSTMTG00000007906) #15 ENSTMTG00000007940 #16 MAP2K1 (ENSTMTG00000007966) #17 ENSTMTG00000007987 ENSTMTG00000008003 #19 ZWILCH (ENSTMTG00000008057) #20 LCTL (ENSTMTG00000008371) #21 SMAD6 (ENSTMTG00000008403) #22 SMAD3 (ENSTMTG00000008413) #23 AAGAB (ENSTMTG00000008426) #24 IQCH (ENSTMTG00000008467) #25 ENSTMTG00000008700 MAP2K5 (ENSTMTG00000008725) SKOR1 (ENSTMTG00000008807) PIAS1 (ENSTMTG00000008856) CALML4 (ENSTMTG00000008891) CLN6 (ENSTMTG00000008908) FEM1B (ENSTMTG00000008924) ITGA11 (ENSTMTG00000008937) ENSTMTG00000009016 ENSTMTG00000009040 NOX5 (ENSTMTG00000009057) GLCE (ENSTMTG00000009094) Archosauria ANCESTRAL SPECIES 9 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES 25 SHC1 (ENSCPRG00005013788) CKS1B (ENSCPRG00005013794) FLAD1 (ENSCPRG00005013796) ATP8B2 (ENSCPRG00005013833) ENSCPRG00005014057 #22 ENSCPRG00005014059 UBAP2L (ENSCPRG00005000060) C1orf43 (ENSCPRG00005000715) ENSCPRG00005001020 NUP210L (ENSCPRG00005002240) RPS27 (ENSCPRG00005002458) RAB13 (ENSCPRG00005002474) JTB (ENSCPRG00005002527) ENSCPRG00005002531 SLC39A1 (ENSCPRG00005002532) ENSCPRG00005002537 #22 ENSCPRG00005002542 ENSCPRG00005002545 ENSCPRG00005002550 ADAM15 (ENSCPRG00005002552) EFNA4 (ENSCPRG00005002563) EFNA3 (ENSCPRG00005002569) EFNA1 (ENSCPRG00005002572) SLC50A1 (ENSCPRG00005002575) TRIM46 (ENSCPRG00005002583) DPM3 (ENSCPRG00005002593) KRTCAP2 (ENSCPRG00005002596) ENSCPRG00005002605 THBS3 (ENSCPRG00005002723) MTX1 (ENSCPRG00005003233) ENSCPRG00005003247 Australian saltwater crocodile MODERN SPECIES 25 CD244 (ENSCPRG00005013740) SHE (ENSCPRG00005013742) ENSCPRG00005013744 UBE2Q1 (ENSCPRG00005013748) CHRNB2 (ENSCPRG00005013754) ADAR (ENSCPRG00005013761) ENSCPRG00005013765 KCNN3 (ENSCPRG00005013768) PMVK (ENSCPRG00005013773) PBXIP1 (ENSCPRG00005013781) PYGO2 (ENSCPRG00005013783) SHC1 (ENSCPRG00005013788) CKS1B (ENSCPRG00005013794) FLAD1 (ENSCPRG00005013796) ATP8B2 (ENSCPRG00005013833) ENSCPRG00005014057 #22 ENSCPRG00005014059 UBAP2L (ENSCPRG00005000060) C1orf43 (ENSCPRG00005000715) ENSCPRG00005001020 NUP210L (ENSCPRG00005002240) RPS27 (ENSCPRG00005002458) RAB13 (ENSCPRG00005002474) JTB (ENSCPRG00005002527) ENSCPRG00005002531 SLC39A1 (ENSCPRG00005002532) ENSCPRG00005002537 #22 ENSCPRG00005002542 ENSCPRG00005002545 ENSCPRG00005002550 ADAM15 (ENSCPRG00005002552) Australian saltwater crocodile MODERN SPECIES 31 DPP8 (ENSCPRG00005000410) HACD3 (ENSCPRG00005000454) INTS14 (ENSCPRG00005000472) ENSCPRG00005000476 #7 ENSCPRG00005000484 #7 DENND4A (ENSCPRG00005000499) #11 RAB11A (ENSCPRG00005000532) #12 MEGF11 (ENSCPRG00005000552) #14 DIS3L (ENSCPRG00005000594) #15 TIPIN (ENSCPRG00005000607) #16 MAP2K1 (ENSCPRG00005000623) #17 SNAPC5 (ENSCPRG00005000626) #18 RPL4 (ENSCPRG00005000630) #19 ZWILCH (ENSCPRG00005000651) #20 LCTL (ENSCPRG00005000669) #21 SMAD6 (ENSCPRG00005000698) #22 SMAD3 (ENSCPRG00005000730) #23 AAGAB (ENSCPRG00005000756) #24 IQCH (ENSCPRG00005000770) #25 C15orf61 (ENSCPRG00005000791) MAP2K5 (ENSCPRG00005000813) PIAS1 (ENSCPRG00005000826) CALML4 (ENSCPRG00005000835) CLN6 (ENSCPRG00005000877) ENSCPRG00005000881 ITGA11 (ENSCPRG00005000885) CORO2B (ENSCPRG00005000933) ENSCPRG00005000951 ENSCPRG00005000961 NOX5 (ENSCPRG00005000970) ENSCPRG00005000980 Aves ANCESTRAL SPECIES 14 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Neognathae ANCESTRAL SPECIES 11 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Neognathae_b ANCESTRAL SPECIES 13 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Passeriformes ANCESTRAL SPECIES 12 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Passeriformes_d ANCESTRAL SPECIES 12 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Passeriformes_g ANCESTRAL SPECIES 13 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT01060000252718 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240.oc ENSGT00940000164138 ENSGT00400000022240.nc ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b Passeroidea ANCESTRAL SPECIES 12 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT01060000252718 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00960000188521 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240.nc ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043.e Common canary DUPLICATION Common canary MODERN SPECIES 81 ENSSCAG00000013039 C1orf43 (ENSSCAG00000013023) UBAP2L (ENSSCAG00000012983) HAX1 (ENSSCAG00000012964) AQP10 (ENSSCAG00000012955) ATP8B2 (ENSSCAG00000012942) IL6R (ENSSCAG00000012928) SHE (ENSSCAG00000012923) UBE2Q1 (ENSSCAG00000012918) CHRNB2 (ENSSCAG00000012910) ADAR (ENSSCAG00000012907) KCNN3 (ENSSCAG00000012817) PBXIP1 (ENSSCAG00000012790) SHC1 (ENSSCAG00000012782) FLAD1 (ENSSCAG00000012777) ENSSCAG00000012771 #22 ZBTB7B (ENSSCAG00000012768) ADAM15 (ENSSCAG00000012759) ENSSCAG00000012756 SLC50A1 (ENSSCAG00000012748) KRTCAP2 (ENSSCAG00000012742) TRIM46 (ENSSCAG00000012735) ENSSCAG00000012729 MTX1 (ENSSCAG00000012724) THBS3 (ENSSCAG00000012370) ENSSCAG00000012249 ENSSCAG00000012243 ENSSCAG00000012237 CLK2 (ENSSCAG00000012209) ENSSCAG00000012198 FDPS (ENSSCAG00000012185) Common canary MODERN SPECIES 12 HACD3 (ENSSCAG00000010199) INTS14 (ENSSCAG00000010200) SLC24A1 (ENSSCAG00000010206) #7 DENND4A (ENSSCAG00000010214) #11 RAB11A (ENSSCAG00000010226) #12 MEGF11 (ENSSCAG00000010255) #14 DIS3L (ENSSCAG00000010324) #15 TIPIN (ENSSCAG00000010328) #16 MAP2K1 (ENSSCAG00000010333) #17 ENSSCAG00000010341 RPL4 (ENSSCAG00000010344) #19 ZWILCH (ENSSCAG00000010364) #20 LCTL (ENSSCAG00000010374) #21 ENSSCAG00000010394 ENSSCAG00000010404 SMAD6 (ENSSCAG00000010407) #22 SMAD3 (ENSSCAG00000010414) #23 AAGAB (ENSSCAG00000010418) #24 IQCH (ENSSCAG00000010432) #25 ENSSCAG00000010438 MAP2K5 (ENSSCAG00000010448) PIAS1 (ENSSCAG00000010481) CALML4 (ENSSCAG00000010490) ENSSCAG00000010493 ENSSCAG00000010498 ENSSCAG00000010505 ITGA11 (ENSSCAG00000010528) CORO2B (ENSSCAG00000010620) ENSSCAG00000010637 NOX5 (ENSSCAG00000010650) GLCE (ENSSCAG00000010658) Zebra finch DUPLICATION Zebra finch MODERN SPECIES 18 HAX1 (ENSTGUG00000003919) AQP10 (ENSTGUG00000020695) ATP8B2 (ENSTGUG00000003921) IL6R (ENSTGUG00000024535) SHE (ENSTGUG00000004055) UBE2Q1 (ENSTGUG00000004068) CHRNB2 (ENSTGUG00000004092) ADAR (ENSTGUG00000004105) KCNN3 (ENSTGUG00000024010) PMVK (ENSTGUG00000027579) PBXIP1 (ENSTGUG00000025186) PYGO2 (ENSTGUG00000027449) SHC1 (ENSTGUG00000004152) CKS1B (ENSTGUG00000019644) FLAD1 (ENSTGUG00000004205) ENSTGUG00000026230 #22 C1orf43 (ENSTGUG00000003819) ZBTB7B (ENSTGUG00000020643) ENSTGUG00000023566 ENSTGUG00000004220 CCT3 (ENSTGUG00000004232) ENSTGUG00000026384 ENSTGUG00000022396 ENSTGUG00000028717 ENSTGUG00000004268 ENSTGUG00000019933 ENSTGUG00000019657 ENSTGUG00000014870 Zebra finch MODERN SPECIES 1 IGDCC4 (ENSTGUG00000009136) DPP8 (ENSTGUG00000009145) HACD3 (ENSTGUG00000009174) INTS14 (ENSTGUG00000009182) SLC24A1 (ENSTGUG00000009206) #7 DENND4A (ENSTGUG00000009220) #11 RAB11A (ENSTGUG00000009279) #12 MEGF11 (ENSTGUG00000009293) #14 DIS3L (ENSTGUG00000009315) #15 TIPIN (ENSTGUG00000009358) #16 ENSTGUG00000019914 MAP2K1 (ENSTGUG00000009363) #17 RPL4 (ENSTGUG00000009403) #19 ZWILCH (ENSTGUG00000009439) #20 LCTL (ENSTGUG00000009457) #21 SMAD6 (ENSTGUG00000009467) #22 SMAD3 (ENSTGUG00000009470) #23 AAGAB (ENSTGUG00000009497) #24 IQCH (ENSTGUG00000009504) #25 ENSTGUG00000009527 MAP2K5 (ENSTGUG00000009531) ENSTGUG00000025021 ENSTGUG00000009553 ENSTGUG00000029271 ENSTGUG00000021449 ENSTGUG00000024498 ENSTGUG00000009614 ENSTGUG00000020847 ANP32A (ENSTGUG00000009670) ENSTGUG00000026437 ENSTGUG00000019518 Medium ground finch DUPLICATION Medium ground finch MODERN SPECIES 247 UBAP2L (ENSGFOG00000010247) ENSGFOG00000010280 AQP10 (ENSGFOG00000010284) ATP8B2 (ENSGFOG00000010292) IL6R (ENSGFOG00000010325) SHE (ENSGFOG00000010337) UBE2Q1 (ENSGFOG00000010349) CHRNB2 (ENSGFOG00000010362) ADAR (ENSGFOG00000010376) KCNN3 (ENSGFOG00000010391) PMVK (ENSGFOG00000010424) ENSGFOG00000010428 SHC1 (ENSGFOG00000010435) CKS1B (ENSGFOG00000010444) FLAD1 (ENSGFOG00000010451) ENSGFOG00000010456 #22 ENSGFOG00000010460 ENSGFOG00000010468 CCT3 (ENSGFOG00000010483) Medium ground finch MODERN SPECIES 69 IGDCC4 (ENSGFOG00000010130) DPP8 (ENSGFOG00000010227) HACD3 (ENSGFOG00000010246) INTS14 (ENSGFOG00000010255) SLC24A1 (ENSGFOG00000010269) #7 DENND4A (ENSGFOG00000010346) #11 RAB11A (ENSGFOG00000011557) #12 MEGF11 (ENSGFOG00000011585) #14 DIS3L (ENSGFOG00000011782) #15 TIPIN (ENSGFOG00000011794) #16 MAP2K1 (ENSGFOG00000011801) #17 ENSGFOG00000011806 RPL4 (ENSGFOG00000011811) #19 ZWILCH (ENSGFOG00000011836) #20 LCTL (ENSGFOG00000011846) #21 SMAD6 (ENSGFOG00000011856) #22 SMAD3 (ENSGFOG00000011865) #23 ENSGFOG00000011872 #24 ENSGFOG00000011876 #24 IQCH (ENSGFOG00000011884) #25 ENSGFOG00000011897 MAP2K5 (ENSGFOG00000011911) PIAS1 (ENSGFOG00000011939) CALML4 (ENSGFOG00000011946) CLN6 (ENSGFOG00000011952) ENSGFOG00000011958 ITGA11 (ENSGFOG00000011965) CORO2B (ENSGFOG00000011982) ENSGFOG00000011990 NOX5 (ENSGFOG00000011998) GLCE (ENSGFOG00000012008) Flycatcher DUPLICATION Flycatcher MODERN SPECIES 17 AQP10 (ENSFALG00000001191) ATP8B2 (ENSFALG00000001195) IL6R (ENSFALG00000028652) SHE (ENSFALG00000001203) UBE2Q1 (ENSFALG00000001215) CHRNB2 (ENSFALG00000001220) ADAR (ENSFALG00000001232) KCNN3 (ENSFALG00000001246) PMVK (ENSFALG00000024139) PBXIP1 (ENSFALG00000001259) PYGO2 (ENSFALG00000015227) SHC1 (ENSFALG00000001262) CKS1B (ENSFALG00000024948) FLAD1 (ENSFALG00000001270) ENSFALG00000024050 ENSFALG00000024658 #22 ENSFALG00000024237 ENSFALG00000002550 ENSFALG00000002555 ENSFALG00000002560 ENSFALG00000024781 PMF1 (ENSFALG00000028987) SLC25A44 (ENSFALG00000002568) SEMA4A (ENSFALG00000002573) LMNA (ENSFALG00000002586) MEX3A (ENSFALG00000014982) ENSFALG00000002594 RAB25 (ENSFALG00000002597) LAMTOR2 (ENSFALG00000002604) UBQLN4 (ENSFALG00000002609) NAXE (ENSFALG00000002625) Flycatcher MODERN SPECIES 1 BNIP2 (ENSFALG00000012551) FOXB1 (ENSFALG00000012555) ANXA2 (ENSFALG00000028021) ICE2 (ENSFALG00000012586) ENSFALG00000026543 RORA (ENSFALG00000012589) VPS13C (ENSFALG00000012641) ENSFALG00000012743 TLN2 (ENSFALG00000012750) TPM1 (ENSFALG00000026833) LACTB (ENSFALG00000012785) RPL4 (ENSFALG00000024664) #19 ZWILCH (ENSFALG00000012802) #20 LCTL (ENSFALG00000012819) #21 ENSFALG00000023761 SMAD6 (ENSFALG00000012842) #22 SMAD3 (ENSFALG00000028582) #23 AAGAB (ENSFALG00000028875) #24 IQCH (ENSFALG00000012896) #25 ENSFALG00000012905 MAP2K5 (ENSFALG00000028460) PIAS1 (ENSFALG00000010137) ENSFALG00000028365 CALML4 (ENSFALG00000010143) CLN6 (ENSFALG00000023153) FEM1B (ENSFALG00000010149) ITGA11 (ENSFALG00000010154) CORO2B (ENSFALG00000010159) ENSFALG00000026588 NOX5 (ENSFALG00000026351) ENSFALG00000010185 Great tit DUPLICATION Great tit MODERN SPECIES 17 HAX1 (ENSPMJG00000000564) AQP10 (ENSPMJG00000000574) ATP8B2 (ENSPMJG00000000586) IL6R (ENSPMJG00000000621) SHE (ENSPMJG00000000635) UBE2Q1 (ENSPMJG00000000644) CHRNB2 (ENSPMJG00000000651) ADAR (ENSPMJG00000000663) KCNN3 (ENSPMJG00000000707) PBXIP1 (ENSPMJG00000000711) PYGO2 (ENSPMJG00000000730) SHC1 (ENSPMJG00000000735) CKS1B (ENSPMJG00000000778) FLAD1 (ENSPMJG00000000781) ENSPMJG00000000789 ENSPMJG00000000793 #22 ZBTB7B (ENSPMJG00000000800) SSR2 (ENSPMJG00000000808) CCT3 (ENSPMJG00000000811) ENSPMJG00000000870 ENSPMJG00000000877 Great tit MODERN SPECIES 1 IGDCC4 (ENSPMJG00000009904) DPP8 (ENSPMJG00000009912) HACD3 (ENSPMJG00000009915) INTS14 (ENSPMJG00000009916) SLC24A1 (ENSPMJG00000009917) #7 DENND4A (ENSPMJG00000009918) #11 RAB11A (ENSPMJG00000009921) #12 MEGF11 (ENSPMJG00000009924) #14 DIS3L (ENSPMJG00000009931) #15 TIPIN (ENSPMJG00000009939) #16 MAP2K1 (ENSPMJG00000009964) #17 SNAPC5 (ENSPMJG00000009967) #18 RPL4 (ENSPMJG00000009971) #19 ZWILCH (ENSPMJG00000009977) #20 LCTL (ENSPMJG00000009979) #21 SMAD6 (ENSPMJG00000009983) #22 SMAD3 (ENSPMJG00000009991) #23 AAGAB (ENSPMJG00000009992) #24 IQCH (ENSPMJG00000009995) #25 C15orf61 (ENSPMJG00000009998) MAP2K5 (ENSPMJG00000010012) PIAS1 (ENSPMJG00000010016) ENSPMJG00000010020 FEM1B (ENSPMJG00000010022) ITGA11 (ENSPMJG00000010024) ENSPMJG00000010045 ENSPMJG00000010057 ENSPMJG00000010061 NOX5 (ENSPMJG00000010066) GLCE (ENSPMJG00000010071) KIF23 (ENSPMJG00000010072) Neognathae_c ANCESTRAL SPECIES 15 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Golden eagle DUPLICATION Golden eagle MODERN SPECIES 25 AQP10 (ENSACCG00020008387) ATP8B2 (ENSACCG00020008415) IL6R (ENSACCG00020008435) SHE (ENSACCG00020008450) UBE2Q1 (ENSACCG00020008458) CHRNB2 (ENSACCG00020008474) ADAR (ENSACCG00020008502) KCNN3 (ENSACCG00020008522) PMVK (ENSACCG00020008535) ENSACCG00020008562 PYGO2 (ENSACCG00020008581) SHC1 (ENSACCG00020008593) CKS1B (ENSACCG00020008608) FLAD1 (ENSACCG00020008618) ENSACCG00020008636 ENSACCG00020008645 #22 ZBTB7B (ENSACCG00020008654) ENSACCG00020008666 ENSACCG00020008682 ADAM15 (ENSACCG00020008706) ENSACCG00020008752 EFNA3 (ENSACCG00020008766) EFNA1 (ENSACCG00020008782) SLC50A1 (ENSACCG00020008802) DPM3 (ENSACCG00020008812) KRTCAP2 (ENSACCG00020008826) TRIM46 (ENSACCG00020008850) ENSACCG00020008865 THBS3 (ENSACCG00020008890) MTX1 (ENSACCG00020008916) ENSACCG00020009038 Golden eagle MODERN SPECIES 21 IGDCC4 (ENSACCG00020009048) DPP8 (ENSACCG00020009512) HACD3 (ENSACCG00020009900) INTS14 (ENSACCG00020009917) SLC24A1 (ENSACCG00020009936) #7 DENND4A (ENSACCG00020009959) #11 RAB11A (ENSACCG00020009992) #12 MEGF11 (ENSACCG00020010081) #14 DIS3L (ENSACCG00020010156) #15 TIPIN (ENSACCG00020010172) #16 MAP2K1 (ENSACCG00020010187) #17 SNAPC5 (ENSACCG00020010201) #18 RPL4 (ENSACCG00020000310) #19 ZWILCH (ENSACCG00020000434) #20 LCTL (ENSACCG00020000480) #21 SMAD6 (ENSACCG00020000507) #22 SMAD3 (ENSACCG00020000522) #23 AAGAB (ENSACCG00020000560) #24 C15orf61 (ENSACCG00020000661) MAP2K5 (ENSACCG00020000704) SKOR1 (ENSACCG00020000753) PIAS1 (ENSACCG00020000781) CALML4 (ENSACCG00020000839) CLN6 (ENSACCG00020000865) FEM1B (ENSACCG00020000880) ITGA11 (ENSACCG00020001060) CORO2B (ENSACCG00020001194) ENSACCG00020001229 NOX5 (ENSACCG00020001264) GLCE (ENSACCG00020001293) PAQR5 (ENSACCG00020001307) Kakapo DUPLICATION Kakapo MODERN SPECIES 60 AQP10 (ENSSHBG00005017184) ATP8B2 (ENSSHBG00005017006) IL6R (ENSSHBG00005016959) SHE (ENSSHBG00005016951) UBE2Q1 (ENSSHBG00005016943) CHRNB2 (ENSSHBG00005016930) ADAR (ENSSHBG00005016925) KCNN3 (ENSSHBG00005016916) PMVK (ENSSHBG00005016909) PBXIP1 (ENSSHBG00005016894) PYGO2 (ENSSHBG00005016882) SHC1 (ENSSHBG00005016875) CKS1B (ENSSHBG00005016866) ENSSHBG00005016858 FLAD1 (ENSSHBG00005016852) ENSSHBG00005016842 #22 ZBTB7B (ENSSHBG00005016837) ADAM15 (ENSSHBG00005016804) EFNA4 (ENSSHBG00005016776) EFNA3 (ENSSHBG00005016770) EFNA1 (ENSSHBG00005016762) SLC50A1 (ENSSHBG00005016756) ENSSHBG00005016750 ENSSHBG00005016744 TRIM46 (ENSSHBG00005016735) ENSSHBG00005016731 THBS3 (ENSSHBG00005016709) MTX1 (ENSSHBG00005016701) ENSSHBG00005016684 ENSSHBG00005016645 ENSSHBG00005016627 Kakapo MODERN SPECIES 1 DPP8 (ENSSHBG00005009877) HACD3 (ENSSHBG00005009669) INTS14 (ENSSHBG00005009649) SLC24A1 (ENSSHBG00005009620) #7 DENND4A (ENSSHBG00005009346) #11 RAB11A (ENSSHBG00005009201) #12 ENSSHBG00005009181 #14 ENSSHBG00005009158 #14 DIS3L (ENSSHBG00005009084) #15 TIPIN (ENSSHBG00005009068) #16 MAP2K1 (ENSSHBG00005009053) #17 SNAPC5 (ENSSHBG00005009047) #18 RPL4 (ENSSHBG00005009017) #19 ZWILCH (ENSSHBG00005008951) #20 LCTL (ENSSHBG00005008922) #21 SMAD6 (ENSSHBG00005000779) #22 SMAD3 (ENSSHBG00005000770) #23 AAGAB (ENSSHBG00005000737) #24 IQCH (ENSSHBG00005000728) #25 C15orf61 (ENSSHBG00005000716) MAP2K5 (ENSSHBG00005000699) SKOR1 (ENSSHBG00005011833) PIAS1 (ENSSHBG00005011813) CALML4 (ENSSHBG00005011797) CLN6 (ENSSHBG00005011786) FEM1B (ENSSHBG00005011772) ITGA11 (ENSSHBG00005011743) CORO2B (ENSSHBG00005011717) ENSSHBG00005011703 NOX5 (ENSSHBG00005011668) GLCE (ENSSHBG00005011650) Galloanserae ANCESTRAL SPECIES 10 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Anatidae ANCESTRAL SPECIES 36 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689.c ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 ENSGT00940000158844 Duck DUPLICATION Duck MODERN SPECIES 2636 FLAD1 (ENSAPLG00000023792) ENSAPLG00000022834 ENSAPLG00000020208 #22 Duck MODERN SPECIES 2 IGDCC4 (ENSAPLG00000013127) DPP8 (ENSAPLG00000013345) HACD3 (ENSAPLG00000013863) INTS14 (ENSAPLG00000014064) SLC24A1 (ENSAPLG00000014168) #7 DENND4A (ENSAPLG00000014243) #11 RAB11A (ENSAPLG00000014962) #12 MEGF11 (ENSAPLG00000015095) #14 DIS3L (ENSAPLG00000015294) #15 TIPIN (ENSAPLG00000015332) #16 MAP2K1 (ENSAPLG00000015480) #17 SNAPC5 (ENSAPLG00000001863) #18 RPL4 (ENSAPLG00000015853) #19 ZWILCH (ENSAPLG00000000968) #20 ENSAPLG00000028241 #21 SMAD6 (ENSAPLG00000000997) #22 SMAD3 (ENSAPLG00000007006) #23 AAGAB (ENSAPLG00000007346) #24 IQCH (ENSAPLG00000007592) #25 C15orf61 (ENSAPLG00000001076) MAP2K5 (ENSAPLG00000007755) ENSAPLG00000002495 CALML4 (ENSAPLG00000003092) CLN6 (ENSAPLG00000003181) FEM1B (ENSAPLG00000003592) ITGA11 (ENSAPLG00000003663) ENSAPLG00000029500 CORO2B (ENSAPLG00000027282) ENSAPLG00000016831 NOX5 (ENSAPLG00000005589) GLCE (ENSAPLG00000005999) Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 438 TPM3 (ENSABRG00000017956) C1orf43 (ENSABRG00000018264) UBAP2L (ENSABRG00000018427) ATP8B2 (ENSABRG00000019455) IL6R (ENSABRG00000019477) SHE (ENSABRG00000019481) UBE2Q1 (ENSABRG00000019484) CHRNB2 (ENSABRG00000019490) ADAR (ENSABRG00000019495) KCNN3 (ENSABRG00000019499) PMVK (ENSABRG00000019507) ENSABRG00000019510 PYGO2 (ENSABRG00000019514) SHC1 (ENSABRG00000019517) FLAD1 (ENSABRG00000019532) ENSABRG00000019538 #22 Pink-footed goose MODERN SPECIES 52 ENSABRG00000008924 HACD3 (ENSABRG00000008901) INTS14 (ENSABRG00000008861) SLC24A1 (ENSABRG00000008827) #7 DENND4A (ENSABRG00000008768) #11 RAB11A (ENSABRG00000008748) #12 MEGF11 (ENSABRG00000008723) #14 DIS3L (ENSABRG00000008682) #15 TIPIN (ENSABRG00000008669) #16 ENSABRG00000008668 MAP2K1 (ENSABRG00000008635) #17 SNAPC5 (ENSABRG00000008617) #18 RPL4 (ENSABRG00000008586) #19 ZWILCH (ENSABRG00000008567) #20 LCTL (ENSABRG00000008534) #21 SMAD6 (ENSABRG00000008516) #22 SMAD3 (ENSABRG00000008486) #23 AAGAB (ENSABRG00000008468) #24 IQCH (ENSABRG00000008459) #25 C15orf61 (ENSABRG00000008455) MAP2K5 (ENSABRG00000008420) PIAS1 (ENSABRG00000008359) CALML4 (ENSABRG00000008336) CLN6 (ENSABRG00000008307) ENSABRG00000008298 ITGA11 (ENSABRG00000007970) CORO2B (ENSABRG00000007931) ENSABRG00000007925 ENSABRG00000007920 NOX5 (ENSABRG00000007909) GLCE (ENSABRG00000007906) Phasianidae ANCESTRAL SPECIES 11 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Japanese quail DUPLICATION Japanese quail MODERN SPECIES 17 UBAP2L (ENSCJPG00005014213) ATP8B2 (ENSCJPG00005014206) IL6R (ENSCJPG00005014205) SHE (ENSCJPG00005014195) UBE2Q1 (ENSCJPG00005014194) CHRNB2 (ENSCJPG00005014193) ADAR (ENSCJPG00005014192) KCNN3 (ENSCJPG00005014190) PMVK (ENSCJPG00005014189) ENSCJPG00005014188 PYGO2 (ENSCJPG00005014187) SHC1 (ENSCJPG00005014186) CKS1B (ENSCJPG00005014185) ENSCJPG00005014184 FLAD1 (ENSCJPG00005014183) ENSCJPG00005014182 #22 ENSCJPG00005014179 ENSCJPG00005014178 GATAD2B (ENSCJPG00005014177) SLC27A3 (ENSCJPG00005014160) INTS3 (ENSCJPG00005014144) ILF2 (ENSCJPG00005014123) SNAPIN (ENSCJPG00005014122) CHTOP (ENSCJPG00005014121) S100A1 (ENSCJPG00005014120) ENSCJPG00005014119 S100A16 (ENSCJPG00005014118) ENSCJPG00005014117 ENSCJPG00005014116 ENSCJPG00005014115 ENSCJPG00005014114 Japanese quail MODERN SPECIES 1 IGDCC3 (ENSCJPG00005020762) IGDCC4 (ENSCJPG00005020763) DPP8 (ENSCJPG00005020764) HACD3 (ENSCJPG00005020802) INTS14 (ENSCJPG00005020803) SLC24A1 (ENSCJPG00005020804) #7 DENND4A (ENSCJPG00005020807) #11 RAB11A (ENSCJPG00005020908) #12 MEGF11 (ENSCJPG00005020910) #14 DIS3L (ENSCJPG00005020941) #15 TIPIN (ENSCJPG00005020942) #16 MAP2K1 (ENSCJPG00005020944) #17 SNAPC5 (ENSCJPG00005020958) #18 RPL4 (ENSCJPG00005020961) #19 ZWILCH (ENSCJPG00005020968) #20 SMAD6 (ENSCJPG00005020969) #22 SMAD3 (ENSCJPG00005020970) #23 AAGAB (ENSCJPG00005020971) #24 IQCH (ENSCJPG00005020972) #25 C15orf61 (ENSCJPG00005020973) MAP2K5 (ENSCJPG00005020975) SKOR1 (ENSCJPG00005020991) PIAS1 (ENSCJPG00005020993) CALML4 (ENSCJPG00005020995) CLN6 (ENSCJPG00005020996) FEM1B (ENSCJPG00005020997) ITGA11 (ENSCJPG00005020998) CORO2B (ENSCJPG00005020999) ENSCJPG00005021000 GLCE (ENSCJPG00005021002) PAQR5 (ENSCJPG00005021003) Phasianidae_b ANCESTRAL SPECIES 11 ENSGT00940000156969 ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Chicken DUPLICATION Chicken MODERN SPECIES 17 HAX1 (ENSGALG00010027870) AQP10 (ENSGALG00010027878) ATP8B2 (ENSGALG00010027883) IL6R (ENSGALG00010027886) SHE (ENSGALG00010027892) UBE2Q1 (ENSGALG00010027902) CHRNB2 (ENSGALG00010027910) ADAR (ENSGALG00010027916) KCNN3 (ENSGALG00010027534) PMVK (ENSGALG00010027899) PBXIP1 (ENSGALG00010027908) PYGO2 (ENSGALG00010027913) SHC1 (ENSGALG00010027922) CKS1B (ENSGALG00010027926) FLAD1 (ENSGALG00010027928) ENSGALG00010027933 #22 ZBTB7B (ENSGALG00010027940) KHDC4 (ENSGALG00010027942) DCST2 (ENSGALG00010027945) ENSGALG00010027949 ENSGALG00010027955 ENTREP3 (ENSGALG00010027957) SCAMP3 (ENSGALG00010027962) CLK2 (ENSGALG00010027966) ENSGALG00010027971 FDPS (ENSGALG00010028374) RUSC1 (ENSGALG00010028380) ASH1L (ENSGALG00010028392) DAP3 (ENSGALG00010028425) MSTO1 (ENSGALG00010028433) ENSGALG00010028437 Chicken MODERN SPECIES 1 IGDCC3 (ENSGALG00010017764) IGDCC4 (ENSGALG00010017782) DPP8 (ENSGALG00010017805) HACD3 (ENSGALG00010017811) VWA9 (ENSGALG00010017815) SLC24A1 (ENSGALG00010017819) #7 DENND4A (ENSGALG00010017830) #11 RAB11A (ENSGALG00010017870) #12 MEGF11 (ENSGALG00010017904) #14 DIS3L (ENSGALG00010017941) #15 TIPIN (ENSGALG00010017956) #16 MAP2K1 (ENSGALG00010018000) #17 SNAPC5 (ENSGALG00010018020) #18 RPL4 (ENSGALG00010018036) #19 ZWILCH (ENSGALG00010018042) #20 SMAD6 (ENSGALG00010018054) #22 SMAD3 (ENSGALG00010018099) #23 AAGAB (ENSGALG00010018150) #24 IQCH (ENSGALG00010018192) #25 C15orf61 (ENSGALG00010016968) MAP2K5 (ENSGALG00010017039) SKOR1 (ENSGALG00010017146) PIAS1 (ENSGALG00010017264) CALML4 (ENSGALG00010017314) CLN6 (ENSGALG00010017327) FEM1B (ENSGALG00010017354) ENSGALG00010017382 ITGA11 (ENSGALG00010017403) CORO2B (ENSGALG00010017482) ANP32A (ENSGALG00010017558) NOX5 (ENSGALG00010017588) Turkey DUPLICATION Turkey MODERN SPECIES 1104 ENSMGAG00000018296 ENSMGAG00000007019 ENSMGAG00000018730 #22 Turkey MODERN SPECIES 3 IGDCC3 (ENSMGAG00000009604) IGDCC4 (ENSMGAG00000009630) DPP8 (ENSMGAG00000009649) HACD3 (ENSMGAG00000009683) INTS14 (ENSMGAG00000009693) SLC24A1 (ENSMGAG00000009715) #7 DENND4A (ENSMGAG00000009728) #11 RAB11A (ENSMGAG00000009797) #12 MEGF11 (ENSMGAG00000009776) #14 DIS3L (ENSMGAG00000009805) #15 TIPIN (ENSMGAG00000009857) #16 MAP2K1 (ENSMGAG00000009864) #17 ENSMGAG00000019153 RPL4 (ENSMGAG00000009822) #19 ZWILCH (ENSMGAG00000009851) #20 SMAD6 (ENSMGAG00000009875) #22 SMAD3 (ENSMGAG00000009879) #23 AAGAB (ENSMGAG00000009906) #24 IQCH (ENSMGAG00000009928) #25 C15orf61 (ENSMGAG00000022676) MAP2K5 (ENSMGAG00000009937) PIAS1 (ENSMGAG00000009994) CALML4 (ENSMGAG00000010048) CLN6 (ENSMGAG00000010054) ENSMGAG00000010069 ITGA11 (ENSMGAG00000010073) CORO2B (ENSMGAG00000010149) ENSMGAG00000010171 NOX5 (ENSMGAG00000010183) GLCE (ENSMGAG00000010210) PAQR5 (ENSMGAG00000010133) Anura ANCESTRAL SPECIES ENSGT00940000159637 ENSGT00940000160717 ENSGT00530000062962.b.a ENSGT00390000009486 ENSGT01030000234532.B.e.b #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.B #14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000010331 #18 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369 #21 ENSGT00940000158146 #22 ENSGT00940000153499.b.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00940000157859 ENSGT00400000022240 ENSGT00940000161115 ENSGT00940000155465 ENSGT00940000158689 ENSGT00950000182907.a.b.b.b ENSGT00940000162591 ENSGT00390000006043 Frog MODERN SPECIES 3 igdcc4 (ENSXETG00000006647) dpp8 (ENSXETG00000006646) hacd3 (ENSXETG00000030041) ints14 (ENSXETG00000006644) slc24a1 (ENSXETG00000033301) #7 dennd4a (ENSXETG00000006641) #11 rab11a (ENSXETG00000006639) #12 megf11 (ENSXETG00000015852) #14 dis3l (ENSXETG00000015865) #15 tipin (ENSXETG00000024752) #16 map2k1 (ENSXETG00000015887) #17 snapc5 (ENSXETG00000015893) rpl4 (ENSXETG00000015898) #19 zwilch (ENSXETG00000015894) #20 lctl (ENSXETG00000015904) #21 smad6 (ENSXETG00000015939) #22 smad3 (ENSXETG00000007804) #23 aagab (ENSXETG00000007805) #24 pnlip (ENSXETG00000007807) #25 c15orf61 (ENSXETG00000030493) map2k5 (ENSXETG00000007809) ENSXETG00000044421 skor1 (ENSXETG00000007811) pias1 (ENSXETG00000007813) calml4 (ENSXETG00000007814) cln6 (ENSXETG00000029932) ENSXETG00000044370 fem1b (ENSXETG00000007817) itga11 (ENSXETG00000007816) coro2b (ENSXETG00000025308) anp32a (ENSXETG00000007821) Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 4 ENSLLEG00000023398 ENSLLEG00000023307 ENSLLEG00000023278 ENSLLEG00000023208 ENSLLEG00000022962 ENSLLEG00000022894 ENSLLEG00000022838 ENSLLEG00000022697 ENSLLEG00000022645 ENSLLEG00000021966 PYGO2 (ENSLLEG00000021912) SHC1 (ENSLLEG00000021279) CKS1B (ENSLLEG00000021163) ENSLLEG00000021126 FLAD1 (ENSLLEG00000020865) ENSLLEG00000020831 #22 ENSLLEG00000020765 ENSLLEG00000020652 ENSLLEG00000020417 ADAM15 (ENSLLEG00000018541) ENSLLEG00000018448 ENSLLEG00000018428 ENSLLEG00000018406 EFNA3 (ENSLLEG00000018276) EFNA1 (ENSLLEG00000018230) SLC50A1 (ENSLLEG00000018165) DPM3 (ENSLLEG00000018141) ENSLLEG00000018121 ENSLLEG00000018073 KRTCAP2 (ENSLLEG00000017943) TRIM46 (ENSLLEG00000017769) Leishan spiny toad MODERN SPECIES 6 INTS14 (ENSLLEG00000006176) SLC24A1 (ENSLLEG00000006354) #7 DENND4A (ENSLLEG00000006505) #11 RAB11A (ENSLLEG00000007065) #12 MEGF11 (ENSLLEG00000007218) #14 ENSLLEG00000007739 DIS3L (ENSLLEG00000007758) #15 TIPIN (ENSLLEG00000007891) #16 ENSLLEG00000007941 #17 SNAPC5 (ENSLLEG00000008005) #18 ENSLLEG00000008024 ENSLLEG00000008052 #19 ZWILCH (ENSLLEG00000008260) #20 LCTL (ENSLLEG00000008419) #21 ENSLLEG00000009059 SMAD6 (ENSLLEG00000009090) #22 SMAD3 (ENSLLEG00000009194) #23 AAGAB (ENSLLEG00000009905) #24 IQCH (ENSLLEG00000009988) #25 C15orf61 (ENSLLEG00000010164) MAP2K5 (ENSLLEG00000010224) SKOR1 (ENSLLEG00000010653) ENSLLEG00000010729 PIAS1 (ENSLLEG00000010874) CALML4 (ENSLLEG00000011194) CLN6 (ENSLLEG00000011246) FEM1B (ENSLLEG00000011357) ITGA11 (ENSLLEG00000011407) ENSLLEG00000011591 CORO2B (ENSLLEG00000011668) ENSLLEG00000012168 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1128 SELENBP1 (ENSLACG00000000604) PI4KB (ENSLACG00000003932) myo1eb (ENSLACG00000005949) ZNF687 (ENSLACG00000006991) PIP5K1A (ENSLACG00000007582) ENSLACG00000008719 ENSLACG00000009180 PYGO2 (ENSLACG00000009766) ENSLACG00000010116 SHC1 (ENSLACG00000010713) CKS1B (ENSLACG00000011334) FLAD1 (ENSLACG00000011589) ENSLACG00000011902 ENSLACG00000012139 #22 Coelacanth MODERN SPECIES 951 SMAD6 (ENSLACG00000005364) #22 SMAD3 (ENSLACG00000010552) #23 AAGAB (ENSLACG00000011060) #24 IQCH (ENSLACG00000011619) #25 C15orf61 (ENSLACG00000012466) MAP2K5 (ENSLACG00000012658) SKOR1 (ENSLACG00000014295) Actinopterygii ANCESTRAL SPECIES 626 ENSGT00940000165890 ENSGT00390000010331 #18 ENSGT00940000158146 #22 ENSGT00940000160219 Neopterygii ANCESTRAL SPECIES 562 ENSGT00940000165890 ENSGT00390000010331 #18 ENSGT00940000158146 #22 Osteoglossocephalai ANCESTRAL SPECIES 588 ENSGT00940000165890 ENSGT00390000010331 #18 ENSGT00940000158146 #22 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 2 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT01030000234532.B.e.b.e #7 ENSGT00940000155836.B #11 ENSGT00940000161659 ENSGT00940000158995.a ENSGT00940000163126.a.b ENSGT00940000159258.d ENSGT00980000198641 ENSGT00940000155333.A.a ##14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.b #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00940000158440.h ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 Otomorpha ANCESTRAL SPECIES 327 ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.b #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT01030000234518.B.a.b.a.b.i ENSGT00940000157475.s.a ENSGT01030000234519.e.b.j ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043.o Clupeiformes ANCESTRAL SPECIES 38 ENSGT00440000034107.a.e ENSGT00940000158372 ENSGT00940000155328 ENSGT00390000005270 ENSGT00940000159421 ENSGT00390000005939.b ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.b ENSGT01030000234534.B.a.b.a.b ENSGT01030000234518.B.a.b.a.b.i ENSGT00940000157475.s.a ENSGT01030000234519.e.b.i.b ENSGT00940000158844 ENSGT00390000006043.o ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00530000063760.a ENSGT00940000159506 Atlantic herring MODERN SPECIES 22 ENSCHAG00000025031 TUB (ENSCHAG00000025022) rras2 (ENSCHAG00000025016) copb1 (ENSCHAG00000024999) ZNF821 (ENSCHAG00000024989) ATXN1L (ENSCHAG00000024986) nr1h3 (ENSCHAG00000024937) MADD (ENSCHAG00000024588) bbox1 (ENSCHAG00000024557) fibinb (ENSCHAG00000024552) ENSCHAG00000024549 dis3l (ENSCHAG00000024525) #15 tipin (ENSCHAG00000024505) #16 lctla (ENSCHAG00000024470) #21 crybgx (ENSCHAG00000024459) smad6a (ENSCHAG00000024456) #22 SMAD3 (ENSCHAG00000024368) #23 map2k5 (ENSCHAG00000024351) PIAS1 (ENSCHAG00000024164) ENSCHAG00000024151 UACA (ENSCHAG00000024120) TLE3 (ENSCHAG00000023284) paqr5a (ENSCHAG00000023114) glceb (ENSCHAG00000023095) anp32a (ENSCHAG00000023079) CORO2B (ENSCHAG00000022923) itga11a (ENSCHAG00000022724) ENSCHAG00000022701 PCSK6 (ENSCHAG00000021433) snrpa1 (ENSCHAG00000021391) aldh1a3 (ENSCHAG00000020992) Denticle herring MODERN SPECIES 7 ENSDCDG00000035035 TUB (ENSDCDG00000035039) rras2 (ENSDCDG00000035046) copb1 (ENSDCDG00000035049) ZNF821 (ENSDCDG00000035051) ATXN1L (ENSDCDG00000035052) nr1h3 (ENSDCDG00000035058) MADD (ENSDCDG00000035262) bbox1 (ENSDCDG00000035684) fibinb (ENSDCDG00000035687) ENSDCDG00000035691 dis3l (ENSDCDG00000035696) #15 tipin (ENSDCDG00000022673) #16 lctla (ENSDCDG00000022677) #21 crybgx (ENSDCDG00000022683) smad6a (ENSDCDG00000022684) #22 SMAD3 (ENSDCDG00000022693) #23 map2k5 (ENSDCDG00000022906) skor1a (ENSDCDG00000023245) PIAS1 (ENSDCDG00000023259) ENSDCDG00000023290 UACA (ENSDCDG00000023294) tle3a (ENSDCDG00000023378) paqr5b (ENSDCDG00000025967) glceb (ENSDCDG00000025970) CORO2B (ENSDCDG00000026021) itga11a (ENSDCDG00000027395) ENSDCDG00000027515 PCSK6 (ENSDCDG00000027564) snrpa1 (ENSDCDG00000029782) selenos (ENSDCDG00000029783) Otophysi ANCESTRAL SPECIES 150 ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.b.j #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a ENSGT01030000234519.e.b.j.b.b ENSGT00940000158844.k ENSGT00390000006043.o ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00730000111210 ENSGT00950000182885.A.a.e ENSGT00940000156912.c.a Characiphysae ANCESTRAL SPECIES 27 ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 ENSGT00950000183051.b.a ENSGT00940000156397.a.a ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764.`b #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.b.j #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a ENSGT01030000234519.e.b.j.b.b ENSGT00940000158844.k ENSGT00390000006043.o ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00730000111210 ENSGT00950000182885.A.a.e ENSGT00940000156912.c.a Channel catfish MODERN SPECIES 19 ENSIPUG00000020923 dpy19l3 (ENSIPUG00000020870) ZNF507 (ENSIPUG00000020853) TSHZ3 (ENSIPUG00000020845) znf536 (ENSIPUG00000020834) nr1h3 (ENSIPUG00000019883) ENSIPUG00000019875 madd (ENSIPUG00000019744) Bbox1 (ENSIPUG00000019724) fibin (ENSIPUG00000019720) muc15 (ENSIPUG00000019713) dis3l (ENSIPUG00000019669) #15 tipin (ENSIPUG00000019666) #16 crybgx (ENSIPUG00000019649) LCTL (ENSIPUG00000019586) #21 smad6a (ENSIPUG00000019564) #22 SMAD3 (ENSIPUG00000019525) #23 map2k5 (ENSIPUG00000019485) skor1a (ENSIPUG00000019469) PIAS1 (ENSIPUG00000019429) ENSIPUG00000019422 uaca (ENSIPUG00000019360) tle3b (ENSIPUG00000019127) paqr5b (ENSIPUG00000019056) Glce (ENSIPUG00000019029) anp32a (ENSIPUG00000019014) coro2b (ENSIPUG00000018930) itga11 (ENSIPUG00000018854) mns1 (ENSIPUG00000018825) tph1b (ENSIPUG00000018783) Kcnc1 (ENSIPUG00000018769) Characiphysae_b ANCESTRAL SPECIES 28 ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 ENSGT00950000183051.b.a ENSGT00940000156397.a.a ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764.`b #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.b.j #23 ENSGT00940000157505 ENSGT00940000158440.h ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a ENSGT01030000234519.e.b.j.b.b ENSGT00940000158844.k ENSGT00390000006043.o ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00730000111210 ENSGT00950000182885.A.a.e ENSGT00940000156912.c.a Characoidei ANCESTRAL SPECIES 24 ENSGT00940000164020.c ENSGT00530000063023.A.a ENSGT00940000180790 ENSGT00490000043434 ENSGT00950000183051.b.a ENSGT00940000156397.a.a ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764.`b #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.b.j #23 ENSGT00940000157505 ENSGT00940000158440.h ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a ENSGT01030000234519.e.b.j.b.b ENSGT00940000158844.k ENSGT00390000006043.o ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00730000111210 ENSGT00950000182885.A.a.e ENSGT00940000156912.c.a Red-bellied piranha MODERN SPECIES 92 ZNF536 (ENSPNAG00000014223) nr1h3 (ENSPNAG00000014241) MADD (ENSPNAG00000014316) bbox1 (ENSPNAG00000014337) fibinb (ENSPNAG00000014347) ENSPNAG00000014354 dis3l (ENSPNAG00000014400) #15 tipin (ENSPNAG00000014414) #16 lctla (ENSPNAG00000003140) #21 crybgx (ENSPNAG00000014505) smad6a (ENSPNAG00000014514) #22 smad3a (ENSPNAG00000014544) #23 map2k5 (ENSPNAG00000014566) ENSPNAG00000014587 PIAS1 (ENSPNAG00000003192) ENSPNAG00000014629 UACA (ENSPNAG00000003210) tle3b (ENSPNAG00000014802) paqr5b (ENSPNAG00000003288) glceb (ENSPNAG00000003298) anp32a (ENSPNAG00000014867) CORO2B (ENSPNAG00000014897) itga11a (ENSPNAG00000003319) mns1 (ENSPNAG00000003324) tph1b (ENSPNAG00000014954) kcnc1a (ENSPNAG00000014969) Mexicana tetra MODERN SPECIES 47 ENSAMXG00000033989 ZNF507 (ENSAMXG00000006289) tshz3b (ENSAMXG00000006284) ZNF536 (ENSAMXG00000006281) ENSAMXG00000033278 nr1h3 (ENSAMXG00000006277) MADD (ENSAMXG00000006269) bbox1 (ENSAMXG00000006257) fibinb (ENSAMXG00000025955) ENSAMXG00000006252 dis3l (ENSAMXG00000006220) #15 tipin (ENSAMXG00000035999) #16 lctla (ENSAMXG00000006194) #21 crybgx (ENSAMXG00000006190) ENSAMXG00000029211 smad6a (ENSAMXG00000006188) #22 smad3a (ENSAMXG00000006181) #23 map2k5 (ENSAMXG00000006170) ENSAMXG00000006162 PIAS1 (ENSAMXG00000006151) ENSAMXG00000025954 UACA (ENSAMXG00000006145) Electric eel MODERN SPECIES 82 fibinb (ENSEEEG00000021042) bbox1 (ENSEEEG00000021039) MADD (ENSEEEG00000020444) nr1h3 (ENSEEEG00000020215) ZNF536 (ENSEEEG00000020210) tshz3b (ENSEEEG00000020209) ZNF507 (ENSEEEG00000020208) DPY19L3 (ENSEEEG00000020207) ENSEEEG00000020206 ENSEEEG00000020205 cpeb1b (ENSEEEG00000020204) rbpms2b (ENSEEEG00000020201) tipin (ENSEEEG00000020200) #16 lctla (ENSEEEG00000020199) #21 ENSEEEG00000020190 smad6a (ENSEEEG00000020182) #22 smad3a (ENSEEEG00000020177) #23 map2k5 (ENSEEEG00000020174) skor1a (ENSEEEG00000020172) PIAS1 (ENSEEEG00000020167) ENSEEEG00000020166 UACA (ENSEEEG00000020165) Cyprinoidei ANCESTRAL SPECIES 3 ENSGT00940000158845 ENSGT00940000159190 ENSGT00940000160212 ENSGT01050000244970.b.j.a ENSGT00390000018333 ENSGT00940000157859.a.a ENSGT00940000159068 ENSGT00940000156718 ENSGT00530000063582.b ENSGT00390000007623.c ENSGT01030000235035 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000157369.b #21 ENSGT00940000165890 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.b.j #23 ENSGT00940000157505.d ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a ENSGT01030000234519.e.b.j.b.b ENSGT00940000158844.k ENSGT00390000006043.o ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00940000154757 ENSGT00940000163443.m.a ENSGT00730000111210 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 26 ENSGT00940000159190.a ENSGT00940000160212.eb ENSGT01050000244970.b.j.a.b ENSGT00390000018333.g ENSGT00940000157859.a.a.a ENSGT00400000022240.lc.a.b ENSGT00940000159068.c ENSGT00940000156718.f ENSGT00530000063582.b.l ENSGT00390000007623.c.f ENSGT01030000235035.b ENSGT00530000063106.B.c #15 ENSGT00390000005764.z #16 ENSGT00940000157369.b.b #21 ENSGT00940000165890.h ENSGT00940000158146.a.a #22 ENSGT00940000153499.b.b.d.a.b.j.b #23 ENSGT00530000063582.b.k ENSGT00390000007623.c.e ENSGT01030000235035.a ENSGT00530000063106.B.d #15 ENSGT00940000157369.b.a #21 ENSGT00940000165890.g ENSGT00940000158146.a.b #22 ENSGT00940000153499.b.b.d.a.b.j.a #23 ENSGT00940000157505.d ENSGT00940000158440.g.a.a ENSGT01030000234539.a.a.b.a.b.a.a.b ENSGT01030000234518.B.a.b.a.b.i ENSGT00940000157475.s.a.c ENSGT01030000234519.e.b.j.b.b.b Goldfish MODERN SPECIES 47 ENSCARG00000022962 slc9a5 (ENSCARG00000022557) FHOD1 (ENSCARG00000022177) RFX7 (ENSCARG00000022134) tex9 (ENSCARG00000067072) calml4a (ENSCARG00000067058) cln6a (ENSCARG00000067018) nr1h3 (ENSCARG00000066920) MADD (ENSCARG00000064670) bbox1 (ENSCARG00000064590) fibinb (ENSCARG00000064559) ENSCARG00000064543 dis3l (ENSCARG00000064490) #15 lctla (ENSCARG00000064435) #21 crybgx (ENSCARG00000064411) smad6a (ENSCARG00000064397) #22 smad3a (ENSCARG00000064036) #23 skor1a (ENSCARG00000064004) PIAS1 (ENSCARG00000063946) ENSCARG00000063913 UACA (ENSCARG00000063754) tle3b (ENSCARG00000059297) paqr5b (ENSCARG00000059047) glceb (ENSCARG00000059036) anp32a (ENSCARG00000058959) CORO2B (ENSCARG00000058579) itga11a (ENSCARG00000058212) ENSCARG00000058026 mns1 (ENSCARG00000057934) tph1b (ENSCARG00000057626) kcnc1a (ENSCARG00000057523) Cyprininae_a ANCESTRAL SPECIES 77 ENSGT00940000159190.a ENSGT00940000160212.eb ENSGT01050000244970.b.j.a.b ENSGT00390000018333.g ENSGT00940000157859.a.a.a ENSGT00400000022240.lc.a.b ENSGT00940000159068.c ENSGT00940000156718.f ENSGT00530000063582.b.l ENSGT00390000007623.c.f ENSGT01030000235035.b ENSGT00530000063106.B.c #15 ENSGT00390000005764.z #16 ENSGT00940000157369.b.b #21 ENSGT00940000165890.h ENSGT00940000158146.a.a #22 ENSGT00940000153499.b.b.d.a.b.j.b #23 ENSGT00940000157505.c ENSGT00940000158440.g.a.b ENSGT01030000234539.a.a.b.a.b.a.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a.d ENSGT01030000234519.e.b.j.b.b.a ENSGT00940000158844.k.a ENSGT00390000006043.o.a ENSGT00950000182907.a.b.b.b.l ENSGT00940000158689.eb.b ENSGT00940000155465.i.a ENSGT00730000111210.e.a.a.a ENSGT00940000154757.tb.a ENSGT00940000163443.m.a.a.b Golden-line barbel MODERN SPECIES 874 slc9a5 (ENSSGRG00000012555) FHOD1 (ENSSGRG00000012362) RFX7 (ENSSGRG00000012361) tex9 (ENSSGRG00000012360) calml4a (ENSSGRG00000012358) cln6a (ENSSGRG00000012357) nr1h3 (ENSSGRG00000012280) MADD (ENSSGRG00000004025) bbox1 (ENSSGRG00000003510) fibinb (ENSSGRG00000003506) ENSSGRG00000003501 tipin (ENSSGRG00000003488) #16 dis3l (ENSSGRG00000003440) #15 lctla (ENSSGRG00000002952) #21 crybgx (ENSSGRG00000002921) smad6a (ENSSGRG00000002916) #22 smad3a (ENSSGRG00000001460) #23 MAP2K5 (ENSSGRG00000001326) skor1a (ENSSGRG00000001317) PIAS1 (ENSSGRG00000001304) ENSSGRG00000001293 UACA (ENSSGRG00000001249) Common carp reference MODERN SPECIES ENSCCRG00000021470 slc9a5 (ENSCCRG00000018485) ENSCCRG00000019313 ENSCCRG00000073027 tex9 (ENSCCRG00000019270) cln6a (ENSCCRG00000019275) nr1h3 (ENSCCRG00000038257) ENSCCRG00000038221 bbox1 (ENSCCRG00000051928) fibinb (ENSCCRG00000076312) ENSCCRG00000051933 dis3l (ENSCCRG00000051944) #15 tipin (ENSCCRG00000051973) #16 lctla (ENSCCRG00000051980) #21 crybgx (ENSCCRG00000001610) smad6a (ENSCCRG00000031892) #22 smad3a (ENSCCRG00000075589) #23 map2k5 (ENSCCRG00000000607) skor1a (ENSCCRG00000000576) PIAS1 (ENSCCRG00000070797) ENSCCRG00000062231 ENSCCRG00000013370 tle3b (ENSCCRG00000030981) paqr5b (ENSCCRG00000071186) glceb (ENSCCRG00000046460) anp32a (ENSCCRG00000070700) CORO2B (ENSCCRG00000079311) itga11a (ENSCCRG00000042656) ENSCCRG00000060873 ENSCCRG00000065226 ENSCCRG00000042251 Cyprininae ANCESTRAL SPECIES 26 ENSGT00530000063582.b.l ENSGT00390000007623.c.f ENSGT01030000235035.b ENSGT00530000063106.B.c #15 ENSGT00390000005764.z #16 ENSGT00940000157369.b.b #21 ENSGT00940000165890.h ENSGT00940000158146.a.a #22 ENSGT00940000153499.b.b.d.a.b.j.b #23 ENSGT00530000063582.b.k ENSGT00390000007623.c.e ENSGT01030000235035.a ENSGT00530000063106.B.d #15 ENSGT00940000157369.b.a #21 ENSGT00940000165890.g ENSGT00940000158146.a.b #22 ENSGT00940000153499.b.b.d.a.b.j.a #23 ENSGT00940000157505.d ENSGT00940000158440.g.a.a ENSGT01030000234539.a.a.b.a.b.a.a.b ENSGT01030000234518.B.a.b.a.b.i ENSGT00940000157475.s.a.c ENSGT01030000234519.e.b.j.b.b.b ENSGT00940000158844.k.b ENSGT00390000006043.o.b ENSGT00940000158440.g.a.b ENSGT01030000234539.a.a.b.a.b.a.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00940000157475.s.a.d ENSGT01030000234519.e.b.j.b.b.a ENSGT00940000158844.k.a Goldfish DUPLICATION Goldfish MODERN SPECIES 3457 lctla (ENSCARG00000055979) #21 crybgx (ENSCARG00000055961) tipin (ENSCARG00000055947) #16 smad6a (ENSCARG00000055942) #22 Goldfish MODERN SPECIES 25 cog4 (ENSCARG00000032199) nrn1lb (ENSCARG00000033179) ENSCARG00000033197 ccdc102a (ENSCARG00000033213) DOK4 (ENSCARG00000033234) adgrg1 (ENSCARG00000033254) slc7a6 (ENSCARG00000033512) slc7a6os (ENSCARG00000034612) tmem9b (ENSCARG00000034625) dennd2b (ENSCARG00000034680) bbox1 (ENSCARG00000035601) fibinb (ENSCARG00000035622) ENSCARG00000035631 tipin (ENSCARG00000035645) #16 crybgx (ENSCARG00000035878) smad6a (ENSCARG00000035887) #22 smad3a (ENSCARG00000035926) #23 ENSCARG00000036461 mns1 (ENSCARG00000036477) ENSCARG00000036525 itga11a (ENSCARG00000036622) CORO2B (ENSCARG00000036888) anp32a (ENSCARG00000038207) glceb (ENSCARG00000038379) paqr5b (ENSCARG00000038406) CORO2B (ENSCARG00000038715) anp32a (ENSCARG00000040449) UACA (ENSCARG00000040575) PIAS1 (ENSCARG00000040731) ENSCARG00000040854 cldn15a (ENSCARG00000040864) Cyprininae_a ANCESTRAL SPECIES 2 ENSGT00940000160212.fb ENSGT01050000244970.b.j.a.a ENSGT00390000018333.h ENSGT00940000157859.a.a.b ENSGT00400000022240.lc.b ENSGT00400000022240.lc.a.a.a ENSGT00940000159068.d ENSGT00940000156718.e ENSGT00530000063582.b.k ENSGT00390000007623.c.e ENSGT01030000235035.a ENSGT00390000005764.y.a #16 ENSGT00530000063106.B.d #15 ENSGT00940000157369.b.a #21 ENSGT00940000165890.g ENSGT00940000158146.a.b #22 ENSGT00940000153499.b.b.d.a.b.j.a #23 ENSGT00940000157505.d ENSGT00940000158440.g.a.a ENSGT01030000234539.a.a.b.a.b.a.a.b ENSGT01030000234518.B.a.b.a.b.i ENSGT00940000157475.s.a.c ENSGT01030000234519.e.b.j.b.b.b ENSGT00940000158844.k.b ENSGT00390000006043.o.b ENSGT00950000182907.a.b.b.b.k ENSGT00940000158689.eb.a ENSGT00940000155465.i.b ENSGT00940000163443.m.a.a.a ENSGT00730000111210.e.b ENSGT00950000182885.A.a.e.a Common carp reference MODERN SPECIES 6 ENSCCRG00000002584 ENSCCRG00000071549 slc9a5 (ENSCCRG00000017800) ENSCCRG00000053616 ENSCCRG00000079445 tex9 (ENSCCRG00000038240) cln6a (ENSCCRG00000038243) nr1h3 (ENSCCRG00000038214) ENSCCRG00000017716 bbox1 (ENSCCRG00000019296) fibinb (ENSCCRG00000060452) ENSCCRG00000082862 tipin (ENSCCRG00000019302) #16 crybgx (ENSCCRG00000051990) lctla (ENSCCRG00000050348) #21 smad6a (ENSCCRG00000051993) #22 ENSCCRG00000074909 smad3a (ENSCCRG00000064022) #23 map2k5 (ENSCCRG00000079416) skor1a (ENSCCRG00000016747) PIAS1 (ENSCCRG00000074323) ENSCCRG00000012448 ENSCCRG00000013336 tle3b (ENSCCRG00000013442) paqr5b (ENSCCRG00000015743) glceb (ENSCCRG00000039429) anp32a (ENSCCRG00000057989) CORO2B (ENSCCRG00000035947) itga11a (ENSCCRG00000042314) ENSCCRG00000032576 mns1 (ENSCCRG00000043422) Golden-line barbel MODERN SPECIES 463 ENSSGRG00000041876 slc9a5 (ENSSGRG00000041874) FHOD1 (ENSSGRG00000041694) RFX7 (ENSSGRG00000041690) tex9 (ENSSGRG00000041689) calml4a (ENSSGRG00000041686) cln6a (ENSSGRG00000041678) nr1h3 (ENSSGRG00000041581) MADD (ENSSGRG00000036092) bbox1 (ENSSGRG00000035980) fibinb (ENSSGRG00000035979) ENSSGRG00000035978 dis3l (ENSSGRG00000035956) #15 lctla (ENSSGRG00000035931) #21 crybgx (ENSSGRG00000035930) smad6a (ENSSGRG00000035929) #22 smad3a (ENSSGRG00000035769) #23 map2k5 (ENSSGRG00000035763) skor1a (ENSSGRG00000035761) PIAS1 (ENSSGRG00000035745) ENSSGRG00000035743 UACA (ENSSGRG00000035741) tle3b (ENSSGRG00000035215) paqr5b (ENSSGRG00000035203) glceb (ENSSGRG00000035201) anp32a (ENSSGRG00000035200) CORO2B (ENSSGRG00000035199) itga11a (ENSSGRG00000035197) ENSSGRG00000035195 mns1 (ENSSGRG00000035193) tph1b (ENSSGRG00000035188) Zebrafish MODERN SPECIES 22 tex9 (ENSDARG00000010586) calml4a (ENSDARG00000075800) cln6a (ENSDARG00000077584) ENSDARG00000077910 ENSDARG00000105574 nr1h3 (ENSDARG00000098439) MADD (ENSDARG00000003495) bbox1 (ENSDARG00000036135) ENSDARG00000111781 fibinb (ENSDARG00000087196) ENSDARG00000105641 dis3l (ENSDARG00000053200) #15 tipin (ENSDARG00000036136) #16 lctla (ENSDARG00000036139) #21 crybgx (ENSDARG00000036140) smad6a (ENSDARG00000053209) #22 smad3a (ENSDARG00000036096) #23 map2k5 (ENSDARG00000011851) skor1a (ENSDARG00000069030) PIAS1 (ENSDARG00000036094) ENSDARG00000069028 UACA (ENSDARG00000060238) tle3b (ENSDARG00000069006) paqr5b (ENSDARG00000052688) glceb (ENSDARG00000068981) anp32a (ENSDARG00000006487) CORO2B (ENSDARG00000079440) itga11a (ENSDARG00000036086) ITLN1 (ENSDARG00000095082) ENSDARG00000105568 itln2 (ENSDARG00000036084) Euteleosteomorpha ANCESTRAL SPECIES 194 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00940000155837.o ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 Protacanthopterygii ANCESTRAL SPECIES 152 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00940000165054.A.c ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 Salmoninae ANCESTRAL SPECIES 1 ENSGT00940000160588 ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00940000166194.a.b ENSGT00390000006196.k.b ENSGT00390000006196.l ENSGT00940000154860.a.a.d ENSGT00940000157405.c.b ENSGT00390000001680 ENSGT00940000155379.g.a ENSGT00940000154234.a.d ENSGT00940000157089.A.a ENSGT00940000159073 ENSGT00390000013315 ENSGT00940000161262.a.n ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.b.h.a #23 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a.k.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT00950000182965.a.b.b.b ENSGT00940000157475 ENSGT01030000234519.e.b.m.a ENSGT00940000165054.A.c ENSGT00940000155837.p.d ENSGT00940000155837.p.c.a ENSGT00940000158844 ENSGT00390000006043 Salmoninae_a DUPLICATION Salmoninae_a DUPLICATION Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES ENSGT00940000158146.a.c.a.a #22 Salmo ANCESTRAL SPECIES ENSGT00940000158146.a.c.a.a #22 River trout MODERN SPECIES 3 ENSSTUG00000009872 ttc17 (ENSSTUG00000009896) hsd17b12b (ENSSTUG00000010485) ENSSTUG00000010500 LRRC4C (ENSSTUG00000010505) apip (ENSSTUG00000010508) slc1a2a (ENSSTUG00000010538) PAMR1 (ENSSTUG00000010619) CRY2 (ENSSTUG00000010660) slc35c1 (ENSSTUG00000010792) ENSSTUG00000010798 CHST1 (ENSSTUG00000010805) ENSSTUG00000010812 ENSSTUG00000010818 ENSSTUG00000010826 SMAD6 (ENSSTUG00000010836) #22 rhpn2 (ENSSTUG00000010864) ENSSTUG00000011680 cep89 (ENSSTUG00000011701) zgc:165481 (ENSSTUG00000011768) nudt19 (ENSSTUG00000011774) nudt19 (ENSSTUG00000011787) SLC7A9 (ENSSTUG00000011793) RGS9BP (ENSSTUG00000011805) ap3s2 (ENSSTUG00000011811) IGF1R (ENSSTUG00000011980) LRRC28 (ENSSTUG00000017182) ENSSTUG00000017191 SERF2 (ENSSTUG00000017195) ZNF710 (ENSSTUG00000017219) IDH2 (ENSSTUG00000017237) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000158146.a.c.a.a #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000158146.a.c.a.a #22 Chinook salmon MODERN SPECIES 1088 smad6a (ENSOTSG00005015940) #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000158146.a.c.a.b #22 Salmo ANCESTRAL SPECIES 45 ENSGT00940000155870.a.b ENSGT00940000155323.a.h ENSGT00940000166219.g.a ENSGT00940000160121.c ENSGT00940000157633 ENSGT00390000015016.c ENSGT00940000155352.eb.a.b ENSGT00940000158980.tb ENSGT00940000154963.h ENSGT00390000014757.w.a ENSGT00940000161814.g.b.g.d.b.a ENSGT00940000157089.A.a ENSGT00940000159073 ENSGT00390000013315 ENSGT00940000161262.a.n.e ENSGT00940000158146.a.c.a.b #22 ENSGT00940000153499.b.b.d.a.a.d #23 ENSGT00940000158146.a.c.b #22 ENSGT00940000153499.b.b.d.a.a.c #23 ENSGT00940000157505 ENSGT00940000158440.g.a.e.a ENSGT01030000234539.a.a.b.a.b.a.a.k.a.b ENSGT01030000234518.B.a.b.a.b.d ENSGT00950000182965.a.b.a.a.h River trout MODERN SPECIES 21 ENSSTUG00000012217 ttc17 (ENSSTUG00000012270) hsd17b12b (ENSSTUG00000013517) ENSSTUG00000013536 ENSSTUG00000013540 LRRC4C (ENSSTUG00000013543) apip (ENSSTUG00000013552) slc1a2a (ENSSTUG00000013581) PAMR1 (ENSSTUG00000013601) CRY2 (ENSSTUG00000013635) slc35c1 (ENSSTUG00000013839) CHST1 (ENSSTUG00000013841) ENSSTUG00000013845 ENSSTUG00000013853 ENSSTUG00000013858 smad6a (ENSSTUG00000013876) #22 SMAD3 (ENSSTUG00000013882) #23 map2k5 (ENSSTUG00000013921) skor1a (ENSSTUG00000013956) TLE3 (ENSSTUG00000014027) ENSSTUG00000016054 kif23 (ENSSTUG00000016129) PAQR5 (ENSSTUG00000018329) glceb (ENSSTUG00000018363) ENSSTUG00000018392 anp32a (ENSSTUG00000018395) CORO2B (ENSSTUG00000018417) itga11a (ENSSTUG00000018657) ENSSTUG00000018937 ENSSTUG00000018943 calml4a (ENSSTUG00000018951) Salmoninae_a ANCESTRAL SPECIES 1 ENSGT00940000155323.a.h ENSGT00940000166219.g.a ENSGT00940000160121.c ENSGT00940000157633 ENSGT00940000153272.a.b.c.j ENSGT00390000015016.c ENSGT00940000155352.eb.a.b ENSGT00940000158980.tb ENSGT00940000154963.h ENSGT00390000014757.w.a ENSGT00940000161814.g.b.g.d.b.a ENSGT00940000157089.A.a ENSGT00940000159073 ENSGT00390000013315 ENSGT00940000161262.a.n ENSGT00940000158146.a.c.b #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a.k.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.a.h ENSGT00950000182965.a.b.a.a.g ENSGT00940000157475 ENSGT01030000234519.e.b.m.a ENSGT00940000165054.A.c ENSGT00940000155837.p.d ENSGT00940000155837.p.c.a ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b Salmo ANCESTRAL SPECIES 45 ENSGT00940000166219.g.a ENSGT00940000160121.c ENSGT00940000157633 ENSGT00390000015016.c ENSGT00940000155352.eb.a.b ENSGT00940000158980.tb ENSGT00940000154963.h ENSGT00390000014757.w.a ENSGT00940000161814.g.b.g.d.b.a ENSGT00940000157089.A.a ENSGT00940000159073 ENSGT00390000013315 ENSGT00940000161262.a.n.e ENSGT00940000158146.a.c.a.b #22 ENSGT00940000153499.b.b.d.a.a.d #23 ENSGT00940000158146.a.c.b #22 ENSGT00940000153499.b.b.d.a.a.c #23 ENSGT00940000157505 ENSGT00940000158440.g.a.e.a ENSGT01030000234539.a.a.b.a.b.a.a.k.a.b ENSGT01030000234518.B.a.b.a.b.d ENSGT00950000182965.a.b.a.a.h Atlantic salmon DUPLICATION Atlantic salmon MODERN SPECIES 2 ENSSSAG00000060456 ENSSSAG00000038776 ENSSSAG00000045767 ENSSSAG00000057376 chst1 (ENSSSAG00000095739) ENSSSAG00000004788 ENSSSAG00000109804 ENSSSAG00000020893 ENSSSAG00000019260 ENSSSAG00000113219 ENSSSAG00000086111 ENSSSAG00000106407 ENSSSAG00000116546 ENSSSAG00000097937 ENSSSAG00000024743 smad6a (ENSSSAG00000103532) #22 ENSSSAG00000005798 #23 map2k5 (ENSSSAG00000088189) ENSSSAG00000118360 skor1a (ENSSSAG00000010641) PIAS1 (ENSSSAG00000101551) ENSSSAG00000091284 morf4l1 (ENSSSAG00000005810) ENSSSAG00000040259 ENSSSAG00000097865 TLE3 (ENSSSAG00000074519) ENSSSAG00000113764 KIF23 (ENSSSAG00000120697) PAQR5 (ENSSSAG00000113393) glceb (ENSSSAG00000111912) anp32a (ENSSSAG00000043489) Atlantic salmon MODERN SPECIES 18 ENSSSAG00000009850 ENSSSAG00000076731 ttc17 (ENSSSAG00000040540) hsd17b12b (ENSSSAG00000040461) ENSSSAG00000040431 ENSSSAG00000091855 apip (ENSSSAG00000042232) slc1a2a (ENSSSAG00000009050) ENSSSAG00000062807 CRY2 (ENSSSAG00000069768) ENSSSAG00000112050 ENSSSAG00000114794 ENSSSAG00000120164 ENSSSAG00000085173 chst1 (ENSSSAG00000004800) smad6a (ENSSSAG00000088892) #22 ENSSSAG00000121852 #23 map2k5 (ENSSSAG00000089565) skor1a (ENSSSAG00000065500) PIAS1 (ENSSSAG00000085914) ENSSSAG00000040397 mo4l1 (ENSSSAG00000081184) ENSSSAG00000096373 ENSSSAG00000113826 TLE3 (ENSSSAG00000084287) ENSSSAG00000076630 KIF23 (ENSSSAG00000095510) PAQR5 (ENSSSAG00000055316) glceb (ENSSSAG00000111347) anp32a (ENSSSAG00000113550) CORO2B (ENSSSAG00000120941) Oncorhynchus ANCESTRAL SPECIES ENSGT00940000162677.qc.a ENSGT00940000160588.a ENSGT00940000162677.qc.b ENSGT00940000160588.b ENSGT00940000155426 ENSGT00940000166194.a.a ENSGT00390000006196.l ENSGT00940000154860.a.a.d ENSGT00990000209089.b ENSGT00940000157405.c.b ENSGT00390000001680 ENSGT00940000155379.g.a ENSGT00940000154234.a.d ENSGT00390000013315 ENSGT00940000161262.a.n ENSGT00940000158146.a.c.b #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a.g.b ENSGT00950000182965.a.b.b.b ENSGT00940000157475 ENSGT01030000234519.e.b.m.a.d ENSGT00940000155837.p.d ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00940000154725.j.e.a ENSGT00940000157859.a.a.d ENSGT01030000234518.B.a.b.a.a Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 18 ENSOMYG00000040579 ENSOMYG00000040562 ENSOMYG00000055804 ENSOMYG00000040584 ENSOMYG00000040503 ttc17 (ENSOMYG00000040239) hsd17b12b (ENSOMYG00000065304) ENSOMYG00000040103 ENSOMYG00000055763 apip (ENSOMYG00000072316) slc1a2a (ENSOMYG00000051777) ENSOMYG00000024704 ENSOMYG00000057959 ENSOMYG00000056192 ENSOMYG00000064779 smad6a (ENSOMYG00000050910) #22 smad3 (ENSOMYG00000064926) #23 map2k5 (ENSOMYG00000065445) skor1a (ENSOMYG00000040079) ENSOMYG00000076342 PIAS1 (ENSOMYG00000049756) ENSOMYG00000064318 mo4l1 (ENSOMYG00000049978) UACA (ENSOMYG00000057286) TLE3 (ENSOMYG00000048144) ENSOMYG00000069520 kif23 (ENSOMYG00000039505) PAQR5 (ENSOMYG00000034607) glceb (ENSOMYG00000034637) anp32a (ENSOMYG00000037247) CORO2B (ENSOMYG00000075332) Rainbow trout MODERN SPECIES 27 ENSOMYG00000067852 ENSOMYG00000040589 trpm5 (ENSOMYG00000057858) ENSOMYG00000040541 ENSOMYG00000065809 ttc17 (ENSOMYG00000066781) hsd17b12b (ENSOMYG00000054352) ENSOMYG00000002918 ENSOMYG00000030570 ENSOMYG00000061757 apip (ENSOMYG00000071183) slc1a2a (ENSOMYG00000002858) ENSOMYG00000069110 ENSOMYG00000002832 ENSOMYG00000068058 smad6a (ENSOMYG00000074703) #22 ENSOMYG00000002807 #23 map2k5 (ENSOMYG00000064462) skor1a (ENSOMYG00000057349) ENSOMYG00000077338 PIAS1 (ENSOMYG00000070434) ENSOMYG00000002685 morf4l1 (ENSOMYG00000002673) ENSOMYG00000070845 ENSOMYG00000002551 TLE3 (ENSOMYG00000051984) ENSOMYG00000054756 KIF23 (ENSOMYG00000002448) PAQR5 (ENSOMYG00000002128) glceb (ENSOMYG00000021963) ENSOMYG00000073466 Oncorhynchus_a ANCESTRAL SPECIES 111 ENSGT00940000158146.a.c.b #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a.g.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.a.h ENSGT00940000157475 ENSGT01030000234519.e.b.m.a.c ENSGT00940000165054.A.c ENSGT00940000155837.p.d ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT00940000154725.j.e.a Coho salmon MODERN SPECIES 32 ttc17 (ENSOKIG00005034171) ENSOKIG00005034040 TRAF6 (ENSOKIG00005034012) trpm5 (ENSOKIG00005033333) ENSOKIG00005033243 ENSOKIG00005033109 lingo1b (ENSOKIG00005033071) ENSOKIG00005031839 CHST1 (ENSOKIG00005031722) slc35c1 (ENSOKIG00005031717) PAMR1 (ENSOKIG00005031706) slc1a2a (ENSOKIG00005031245) apip (ENSOKIG00005031096) LRRC4C (ENSOKIG00005031076) ENSOKIG00005031071 smad6a (ENSOKIG00005031063) #22 ENSOKIG00005031026 SMAD3 (ENSOKIG00005030867) #23 MAP2K5 (ENSOKIG00005030818) skor1a (ENSOKIG00005030605) ENSOKIG00005030513 morf4l1 (ENSOKIG00005030482) UACA (ENSOKIG00005030214) ENSOKIG00005030169 ENSOKIG00005030159 ENSOKIG00005030149 TLE3 (ENSOKIG00005027326) ENSOKIG00005027053 kif23 (ENSOKIG00005024942) paqr5a (ENSOKIG00005024740) glceb (ENSOKIG00005024694) Salmoninae_a ANCESTRAL SPECIES 566 ENSGT00940000158146.a.d #22 ENSGT00940000153499.b.b.d.a.b.h.a #23 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000158146.a.d #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000158146.a.d #22 Chinook salmon MODERN SPECIES 1201 ENSOTSG00005023681 #22 Coho salmon MODERN SPECIES 605 ENSOKIG00005039271 #22 Salmo ANCESTRAL SPECIES 524 ENSGT00940000158146.a.d #22 ENSGT00940000153499.b.b.d.a.b.h.a #23 River trout MODERN SPECIES 209 smad6a (ENSSTUG00000030138) #22 ENSSTUG00000030116 #23 ENSSTUG00000030100 ENSSTUG00000030087 skor1a (ENSSTUG00000030043) ENSSTUG00000030019 MAP2K5 (ENSSTUG00000029973) Huchen MODERN SPECIES 4851 smad6a (ENSHHUG00000012951) #22 Northern pike MODERN SPECIES 1 ENSELUG00000020526 trpm5 (ENSELUG00000020566) traf6 (ENSELUG00000020636) ENSELUG00000020662 ENSELUG00000030198 ttc17 (ENSELUG00000020818) ENSELUG00000020845 ENSELUG00000020858 LRRC4C (ENSELUG00000031309) apip (ENSELUG00000020924) slc1a2a (ENSELUG00000000921) PAMR1 (ENSELUG00000020976) CRY2 (ENSELUG00000021019) slc35c1 (ENSELUG00000021039) CHST1 (ENSELUG00000021051) smad6a (ENSELUG00000021062) #22 SMAD3 (ENSELUG00000021087) #23 map2k5 (ENSELUG00000021260) skor1a (ENSELUG00000021269) PIAS1 (ENSELUG00000021305) ENSELUG00000022543 ENSELUG00000021372 UACA (ENSELUG00000021409) tle3a (ENSELUG00000021491) ENSELUG00000021509 kif23 (ENSELUG00000021675) paqr5b (ENSELUG00000021700) ENSELUG00000021715 rbpms2b (ENSELUG00000021784) cpeb1b (ENSELUG00000021835) ENSELUG00000021867 Acanthomorphata ANCESTRAL SPECIES 79 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Euacanthomorphacea ANCESTRAL SPECIES 46 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Percomorphaceae ANCESTRAL SPECIES 15 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842 ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Tiger tail seahorse MODERN SPECIES 136 sdhaf2 (ENSHCOG00000008674) CPSF7 (ENSHCOG00000008694) polr2l (ENSHCOG00000008730) ENSHCOG00000008733 DAGLA (ENSHCOG00000008783) ext2 (ENSHCOG00000008840) ALX4 (ENSHCOG00000008862) caprin1a (ENSHCOG00000008874) nucb2a (ENSHCOG00000008922) mfge8a (ENSHCOG00000008936) abhd2a (ENSHCOG00000008959) abhd2a (ENSHCOG00000009102) ENSHCOG00000009121 slc39a1 (ENSHCOG00000009130) tmem208 (ENSHCOG00000009151) smad6a (ENSHCOG00000009157) #22 SMAD3 (ENSHCOG00000009185) #23 map2k5 (ENSHCOG00000009231) skor1a (ENSHCOG00000009245) PIAS1 (ENSHCOG00000009718) ENSHCOG00000000302 UACA (ENSHCOG00000009850) TLE3 (ENSHCOG00000009901) kif23 (ENSHCOG00000009985) paqr5a (ENSHCOG00000010220) glceb (ENSHCOG00000010239) anp32a (ENSHCOG00000010440) CORO2B (ENSHCOG00000010485) itga11a (ENSHCOG00000010557) Percomorphaceae_B ANCESTRAL SPECIES 12 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Ovalentaria ANCESTRAL SPECIES 17 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i Atherinomorphae ANCESTRAL SPECIES 8 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Cyprinodontiformes ANCESTRAL SPECIES 9 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Aplocheiloidei ANCESTRAL SPECIES 39 ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Mangrove rivulus MODERN SPECIES 48 PLEKHF1 (ENSKMAG00000012266) pop4 (ENSKMAG00000012250) tpcn2 (ENSKMAG00000012198) nadsyn1 (ENSKMAG00000012135) DOK4 (ENSKMAG00000012096) ccdc102a (ENSKMAG00000012052) txlng (ENSKMAG00000012016) rbb4l (ENSKMAG00000011977) HDGFL3 (ENSKMAG00000011937) TSSK2 (ENSKMAG00000011920) BNC1 (ENSKMAG00000011907) gjd6 (ENSKMAG00000011890) ENSKMAG00000011864 slc39a1 (ENSKMAG00000011846) tmem208 (ENSKMAG00000011828) smad6a (ENSKMAG00000011817) #22 SMAD3 (ENSKMAG00000011796) #23 map2k5 (ENSKMAG00000011774) skor1a (ENSKMAG00000011761) PIAS1 (ENSKMAG00000011737) ENSKMAG00000011711 ENSKMAG00000011691 UACA (ENSKMAG00000011640) TLE3 (ENSKMAG00000011582) Turquoise killifish MODERN SPECIES 1616 ENSNFUG00015012013 SECISBP2L (ENSNFUG00015011986) cops2 (ENSNFUG00015011860) fgf7 (ENSNFUG00015011824) DTWD1 (ENSNFUG00015011814) ENSNFUG00015011688 SPATA5L1 (ENSNFUG00015011676) #31 zgc:153317 (ENSNFUG00015011668) #30 SLC30A4 (ENSNFUG00015011646) #29 bloc1s6 (ENSNFUG00015011632) #28 MIBP2 (ENSNFUG00015011622) ENSNFUG00015011612 ENSNFUG00015011607 MFGE8 (ENSNFUG00015010533) ENSNFUG00015010457 SMAD6A (ENSNFUG00015010448) #22 ENSNFUG00015010440 #23 map2k5 (ENSNFUG00015010331) SKOR1B (ENSNFUG00015010285) PIAS1 (ENSNFUG00015010276) ENSNFUG00015010263 ENSNFUG00015009472 TLE3 (ENSNFUG00015008874) ENSNFUG00015008820 KIF23 (ENSNFUG00015007554) ENSNFUG00015007446 paqr5a (ENSNFUG00015007434) GLCE (ENSNFUG00015007420) ANP32A (ENSNFUG00015007414) CORO2B (ENSNFUG00015007223) ENSNFUG00015007197 Cyprinodontoidei ANCESTRAL SPECIES 6 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a NAME_4 ANCESTRAL SPECIES 6 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 Mummichog MODERN SPECIES 2381 SECISBP2L (ENSFHEG00000002604) cops2 (ENSFHEG00000002635) fgf7 (ENSFHEG00000002649) dtwd1 (ENSFHEG00000002658) ENSFHEG00000002718 spata5l1 (ENSFHEG00000002745) #31 zgc:153317 (ENSFHEG00000002784) #30 slc30a4 (ENSFHEG00000002802) #29 bloc1s6 (ENSFHEG00000002826) #28 mibp2 (ENSFHEG00000002843) mfge8a (ENSFHEG00000000710) abhd2a (ENSFHEG00000002888) ENSFHEG00000002949 slc39a1 (ENSFHEG00000002989) tmem208 (ENSFHEG00000003000) smad6a (ENSFHEG00000003014) #22 SMAD3 (ENSFHEG00000003038) #23 map2k5 (ENSFHEG00000003062) skor1a (ENSFHEG00000003074) PIAS1 (ENSFHEG00000003099) ENSFHEG00000003106 Sheepshead minnow MODERN SPECIES 834 mibp2 (ENSCVAG00000009587) mfge8a (ENSCVAG00000009581) abhd2a (ENSCVAG00000009566) ENSCVAG00000009523 slc39a1 (ENSCVAG00000009508) tmem208 (ENSCVAG00000009505) smad6a (ENSCVAG00000009487) #22 ENSCVAG00000009481 SMAD3 (ENSCVAG00000009473) #23 map2k5 (ENSCVAG00000009451) skor1a (ENSCVAG00000009402) Poeciliinae ANCESTRAL SPECIES 13 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Poecilia ANCESTRAL SPECIES 4 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Guppy MODERN SPECIES 455 cops2 (ENSPREG00000008622) fgf7 (ENSPREG00000008601) dtwd1 (ENSPREG00000008579) ENSPREG00000008549 spata5l1 (ENSPREG00000008513) #31 zgc:153317 (ENSPREG00000008498) #30 slc30a4 (ENSPREG00000008454) #29 bloc1s6 (ENSPREG00000008429) #28 mibp2 (ENSPREG00000008371) ENSPREG00000008362 mfge8a (ENSPREG00000008344) abhd2a (ENSPREG00000008309) ENSPREG00000008292 slc39a1 (ENSPREG00000008271) tmem208 (ENSPREG00000008259) smad6a (ENSPREG00000008242) #22 SMAD3 (ENSPREG00000008224) #23 map2k5 (ENSPREG00000008097) skor1a (ENSPREG00000008068) PIAS1 (ENSPREG00000008008) ENSPREG00000007994 ENSPREG00000007965 UACA (ENSPREG00000007848) TLE3 (ENSPREG00000007793) kif23 (ENSPREG00000007754) paqr5a (ENSPREG00000007606) glceb (ENSPREG00000007567) anp32a (ENSPREG00000007226) CORO2B (ENSPREG00000007107) itga11a (ENSPREG00000006903) ENSPREG00000006850 NAME_6 ANCESTRAL SPECIES 52 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Sailfin molly MODERN SPECIES 1096 tmem208 (ENSPLAG00000011590) SMAD6 (ENSPLAG00000011576) #22 ENSPLAG00000011555 ENSPLAG00000011547 SMAD3 (ENSPLAG00000011537) #23 map2k5 (ENSPLAG00000000623) Amazon molly MODERN SPECIES 403 dtwd1 (ENSPFOG00000004960) ENSPFOG00000021978 ENSPFOG00000005055 spata5l1 (ENSPFOG00000005380) #31 zgc:153317 (ENSPFOG00000005494) #30 zgc:153317 (ENSPFOG00000005496) #30 slc30a4 (ENSPFOG00000005499) #29 bloc1s6 (ENSPFOG00000005582) #28 mibp2 (ENSPFOG00000005643) mfge8a (ENSPFOG00000005778) ENSPFOG00000024476 abhd2a (ENSPFOG00000005907) ENSPFOG00000006011 slc39a1 (ENSPFOG00000006114) tmem208 (ENSPFOG00000006153) smad6a (ENSPFOG00000006234) #22 SMAD3 (ENSPFOG00000006336) #23 map2k5 (ENSPFOG00000006546) skor1a (ENSPFOG00000006793) PIAS1 (ENSPFOG00000006900) ENSPFOG00000020296 ENSPFOG00000007139 UACA (ENSPFOG00000007243) TLE3 (ENSPFOG00000007542) kif23 (ENSPFOG00000007858) paqr5a (ENSPFOG00000023869) glceb (ENSPFOG00000008134) anp32a (ENSPFOG00000008166) CORO2B (ENSPFOG00000008252) itga11a (ENSPFOG00000008460) ENSPFOG00000020297 Platyfish MODERN SPECIES 18 cops2 (ENSXMAG00000002272) fgf7 (ENSXMAG00000002280) dtwd1 (ENSXMAG00000002282) ENSXMAG00000002284 spata5l1 (ENSXMAG00000002298) #31 zgc:153317 (ENSXMAG00000002303) #30 zgc:153317 (ENSXMAG00000024159) #30 slc30a4 (ENSXMAG00000002304) #29 bloc1s6 (ENSXMAG00000002310) #28 mibp2 (ENSXMAG00000002314) mfge8a (ENSXMAG00000024531) abhd2a (ENSXMAG00000021333) ENSXMAG00000013063 slc39a1 (ENSXMAG00000002358) tmem208 (ENSXMAG00000025720) smad6a (ENSXMAG00000002372) #22 SMAD3 (ENSXMAG00000002377) #23 map2k5 (ENSXMAG00000002396) skor1a (ENSXMAG00000002428) PIAS1 (ENSXMAG00000017552) ENSXMAG00000017550 ENSXMAG00000017532 UACA (ENSXMAG00000000373) TLE3 (ENSXMAG00000000395) kif23 (ENSXMAG00000000438) paqr5a (ENSXMAG00000025024) glceb (ENSXMAG00000024396) ENSXMAG00000023609 anp32a (ENSXMAG00000000465) CORO2B (ENSXMAG00000000471) itga11a (ENSXMAG00000000479) Oryzias ANCESTRAL SPECIES 13 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Oryzias_b ANCESTRAL SPECIES 5 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Javanese ricefish MODERN SPECIES 17 SECISBP2L (ENSOJAG00000020945) cops2 (ENSOJAG00000020919) fgf7 (ENSOJAG00000020912) dtwd1 (ENSOJAG00000020909) ENSOJAG00000020868 spata5l1 (ENSOJAG00000020864) #31 zgc:153317 (ENSOJAG00000020860) #30 slc30a4 (ENSOJAG00000020847) #29 bloc1s6 (ENSOJAG00000020836) #28 mibp2 (ENSOJAG00000020828) mfge8a (ENSOJAG00000020551) abhd2a (ENSOJAG00000020385) ENSOJAG00000020364 slc39a1 (ENSOJAG00000020359) tmem208 (ENSOJAG00000020347) smad6a (ENSOJAG00000020339) #22 SMAD3 (ENSOJAG00000020254) #23 map2k5 (ENSOJAG00000020167) skor1a (ENSOJAG00000020147) PIAS1 (ENSOJAG00000020086) ENSOJAG00000020045 ENSOJAG00000019954 UACA (ENSOJAG00000019870) ENSOJAG00000019843 ENSOJAG00000019826 NDST2 (ENSOJAG00000019140) polr1c (ENSOJAG00000016249) fbxo28 (ENSOJAG00000016245) nvl (ENSOJAG00000016228) degs1 (ENSOJAG00000016199) cryzl1 (ENSOJAG00000016141) Indian medaka MODERN SPECIES 26 SECISBP2L (ENSOMEG00000009535) cops2 (ENSOMEG00000009424) fgf7 (ENSOMEG00000009379) dtwd1 (ENSOMEG00000009361) ENSOMEG00000009339 spata5l1 (ENSOMEG00000009305) #31 zgc:153317 (ENSOMEG00000009283) #30 slc30a4 (ENSOMEG00000009252) #29 bloc1s6 (ENSOMEG00000009201) #28 mibp2 (ENSOMEG00000009172) mfge8a (ENSOMEG00000009145) abhd2a (ENSOMEG00000009120) ENSOMEG00000009080 slc39a1 (ENSOMEG00000009055) tmem208 (ENSOMEG00000009028) smad6a (ENSOMEG00000008997) #22 SMAD3 (ENSOMEG00000008975) #23 map2k5 (ENSOMEG00000008936) skor1a (ENSOMEG00000008837) PIAS1 (ENSOMEG00000008788) ENSOMEG00000008724 ENSOMEG00000008688 UACA (ENSOMEG00000008617) TLE3 (ENSOMEG00000008528) kif23 (ENSOMEG00000008392) paqr5a (ENSOMEG00000008240) glceb (ENSOMEG00000008185) anp32a (ENSOMEG00000008151) CORO2B (ENSOMEG00000008119) itga11a (ENSOMEG00000008035) ENSOMEG00000007855 Oryzias_a ANCESTRAL SPECIES 6 ENSGT00510000047812 #28 ENSGT00940000157545 #29 ENSGT00390000009277 #30 ENSGT00940000160700 #31 ENSGT00390000004624.a.b ENSGT00940000153766.B ENSGT00940000159843 ENSGT00530000063301.a.b ENSGT00490000043356.a ENSGT00950000182870.b.a ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Japanese Medaka HdrR MODERN SPECIES 17 bloc1s6 (ENSORLG00000002469) #28 slc30a4 (ENSORLG00000002464) #29 zgc:153317 (ENSORLG00000029581) #30 spata5l1 (ENSORLG00000002443) #31 ENSORLG00000002434 dtwd1 (ENSORLG00000002373) fgf7 (ENSORLG00000002360) cops2 (ENSORLG00000002351) SECISBP2L (ENSORLG00000002324) ENSORLG00000026175 mfge8a (ENSORLG00000002302) abhd2a (ENSORLG00000002287) ENSORLG00000002257 slc39a1 (ENSORLG00000029570) tmem208 (ENSORLG00000002234) smad6a (ENSORLG00000002227) #22 ENSORLG00000002207 #23 map2k5 (ENSORLG00000002158) ENSORLG00000028158 skor1a (ENSORLG00000002083) PIAS1 (ENSORLG00000002077) ENSORLG00000002054 ENSORLG00000024795 ENSORLG00000002048 UACA (ENSORLG00000001992) TLE3 (ENSORLG00000001969) ENSORLG00000024566 ENSORLG00000024768 KIF23 (ENSORLG00000001944) paqr5a (ENSORLG00000001912) glceb (ENSORLG00000001883) Chinese medaka MODERN SPECIES 877 abhd2a (ENSOSIG00000006307) ENSOSIG00000006306 slc39a1 (ENSOSIG00000006305) tmem208 (ENSOSIG00000006304) SMAD6 (ENSOSIG00000006302) #22 SMAD3 (ENSOSIG00000006301) #23 map2k5 (ENSOSIG00000006299) snrpd1 (ENSOSIG00000006298) ENSOSIG00000006296 ENSOSIG00000004517 UACA (ENSOSIG00000004433) TLE3 (ENSOSIG00000023308) paqr5a (ENSOSIG00000023110) glceb (ENSOSIG00000023107) kif23 (ENSOSIG00000023101) anp32a (ENSOSIG00000023072) CORO2B (ENSOSIG00000023064) itga11a (ENSOSIG00000023054) ENSOSIG00000023050 ADAMTS7 (ENSOSIG00000022924) Ovalentaria_B ANCESTRAL SPECIES 10 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i Pomacentridae ANCESTRAL SPECIES 15 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc.d ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i Pomacentridae_A ANCESTRAL SPECIES 28 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc.d ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i Amphiprion ANCESTRAL SPECIES 88 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc.d ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT01030000235447 ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000155568 ENSGT00390000017790 ENSGT00390000006347.a Clown anemonefish MODERN SPECIES 3664 tmem208 (ENSAOCG00000015206) SMAD6 (ENSAOCG00000015224) #22 Orange clownfish MODERN SPECIES SECISBP2L (ENSAPEG00000024840) cops2 (ENSAPEG00000024841) fgf7 (ENSAPEG00000000282) dtwd1 (ENSAPEG00000000284) ENSAPEG00000000285 spata5l1 (ENSAPEG00000000289) #31 zgc:153317 (ENSAPEG00000000290) #30 slc30a4 (ENSAPEG00000000342) #29 bloc1s6 (ENSAPEG00000000384) #28 mibp2 (ENSAPEG00000000403) mfge8a (ENSAPEG00000000448) abhd2a (ENSAPEG00000000449) ENSAPEG00000000487 slc39a1 (ENSAPEG00000000497) tmem208 (ENSAPEG00000000523) smad6a (ENSAPEG00000000562) #22 SMAD3 (ENSAPEG00000000565) #23 map2k5 (ENSAPEG00000000578) ENSAPEG00000000686 skor1a (ENSAPEG00000000759) PIAS1 (ENSAPEG00000000768) ENSAPEG00000000820 ENSAPEG00000000905 UACA (ENSAPEG00000000937) TLE3 (ENSAPEG00000000988) kif23 (ENSAPEG00000001068) paqr5a (ENSAPEG00000001179) glceb (ENSAPEG00000001226) arfgap2 (ENSAPEG00000001255) pex16 (ENSAPEG00000001278) cars1 (ENSAPEG00000001363) Spiny chromis MODERN SPECIES 1108 ABHD2 (ENSAPOG00000015850) ENSAPOG00000015893 slc39a1 (ENSAPOG00000015914) tmem208 (ENSAPOG00000015942) SMAD6 (ENSAPOG00000015948) #22 SMAD3 (ENSAPOG00000015998) #23 Bicolor damselfish MODERN SPECIES 300 SECISBP2L (ENSSPAG00000019869) cops2 (ENSSPAG00000019812) fgf7 (ENSSPAG00000019797) dtwd1 (ENSSPAG00000019785) ENSSPAG00000019732 spata5l1 (ENSSPAG00000019717) #31 zgc:153317 (ENSSPAG00000019658) #30 slc30a4 (ENSSPAG00000019624) #29 bloc1s6 (ENSSPAG00000019598) #28 mibp2 (ENSSPAG00000019569) mfge8a (ENSSPAG00000019544) abhd2a (ENSSPAG00000019523) ENSSPAG00000019507 slc39a1 (ENSSPAG00000019503) tmem208 (ENSSPAG00000019488) smad6a (ENSSPAG00000019475) #22 SMAD3 (ENSSPAG00000019459) #23 map2k5 (ENSSPAG00000019430) skor1a (ENSSPAG00000019416) PIAS1 (ENSSPAG00000019364) ENSSPAG00000019352 ENSSPAG00000019312 UACA (ENSSPAG00000019241) TLE3 (ENSSPAG00000019170) Cichlidae ANCESTRAL SPECIES 11 ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT01030000234614.B.a.a.a.s.b ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Midas cichlid MODERN SPECIES 891 slc39a1 (ENSACIG00000006062) ENSACIG00000006052 STOM (ENSACIG00000006046) tmem208 (ENSACIG00000006032) ENSACIG00000006020 #22 eipr1 (ENSACIG00000005997) trappc12 (ENSACIG00000005972) adi1 (ENSACIG00000005957) pth2 (ENSACIG00000005945) ENSACIG00000005922 ENSACIG00000005882 timm9 (ENSACIG00000005864) PALS1 (ENSACIG00000005828) Pseudocrenilabrinae ANCESTRAL SPECIES 13 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT01030000234614.B.a.a.a.s.b ENSGT00390000000223 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Nile tilapia MODERN SPECIES dtwd1 (ENSONIG00000013335) ENSONIG00000013323 spata5l1 (ENSONIG00000013321) #31 zgc:153317 (ENSONIG00000038594) #30 bloc1s6 (ENSONIG00000013314) #28 slc30a4 (ENSONIG00000013317) #29 mibp2 (ENSONIG00000013305) HAPLN3 (ENSONIG00000013302) mfge8a (ENSONIG00000013296) abhd2a (ENSONIG00000013290) ENSONIG00000013288 slc39a1 (ENSONIG00000013286) STOM (ENSONIG00000020887) ENSONIG00000042582 tmem208 (ENSONIG00000013283) smad6a (ENSONIG00000013280) #22 SMAD3 (ENSONIG00000013271) #23 map2k5 (ENSONIG00000036681) skor1a (ENSONIG00000013261) ENSONIG00000027793 PIAS1 (ENSONIG00000013251) ENSONIG00000013250 ENSONIG00000013241 UACA (ENSONIG00000013232) TLE3 (ENSONIG00000013230) kif23 (ENSONIG00000013226) paqr5a (ENSONIG00000013225) glceb (ENSONIG00000013224) anp32a (ENSONIG00000005652) CORO2B (ENSONIG00000005661) ENSONIG00000041808 Pseudocrenilabrinae_A ANCESTRAL SPECIES 13 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000000223 ENSGT01030000234614.B.a.a.a.s.b ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Haplochromini ANCESTRAL SPECIES 11 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT01030000234614.B.a.a.a.s.b ENSGT00390000000223 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Burton s mouthbrooder MODERN SPECIES 530 dtwd1 (ENSHBUG00000012442) ENSHBUG00000012430 spata5l1 (ENSHBUG00000012355) #31 zgc:153317 (ENSHBUG00000012341) #30 slc30a4 (ENSHBUG00000012324) #29 bloc1s6 (ENSHBUG00000012295) #28 mibp2 (ENSHBUG00000012273) HAPLN3 (ENSHBUG00000012266) mfge8a (ENSHBUG00000012251) abhd2a (ENSHBUG00000000339) ENSHBUG00000012195 slc39a1 (ENSHBUG00000012168) STOM (ENSHBUG00000012152) ENSHBUG00000012137 tmem208 (ENSHBUG00000012128) smad6a (ENSHBUG00000012111) #22 SMAD3 (ENSHBUG00000012089) #23 map2k5 (ENSHBUG00000012063) skor1a (ENSHBUG00000012018) ENSHBUG00000012004 Haplochromini_A ANCESTRAL SPECIES 10 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000000223 ENSGT01030000234614.B.a.a.a.s.b ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a P. nyererei MODERN SPECIES 479 dtwd1 (ENSPNYG00000008711) ENSPNYG00000008639 zgc:153317 (ENSPNYG00000008598) #30 spata5l1 (ENSPNYG00000008552) #31 slc30a4 (ENSPNYG00000008509) #29 bloc1s6 (ENSPNYG00000008469) #28 mibp2 (ENSPNYG00000008446) HAPLN3 (ENSPNYG00000008243) mfge8a (ENSPNYG00000008173) abhd2a (ENSPNYG00000008142) ENSPNYG00000008122 slc39a1 (ENSPNYG00000008054) ENSPNYG00000008039 STOM (ENSPNYG00000008024) tmem208 (ENSPNYG00000007964) smad6a (ENSPNYG00000007929) #22 SMAD3 (ENSPNYG00000007902) #23 map2k5 (ENSPNYG00000007807) skor1a (ENSPNYG00000007786) PIAS1 (ENSPNYG00000007731) Haplochromini_B ANCESTRAL SPECIES 3 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT01030000234614.B.a.a.a.s.b ENSGT00390000000223 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234534.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Zebra mbuna MODERN SPECIES 1091 ENSMZEG00005012137 spata5l1 (ENSMZEG00005012171) #31 zgc:153317 (ENSMZEG00005012182) #30 slc30a4 (ENSMZEG00005012190) #29 bloc1s6 (ENSMZEG00005012197) #28 ENSMZEG00005012203 mibp2 (ENSMZEG00005012218) HAPLN3 (ENSMZEG00005012228) mfge8a (ENSMZEG00005012239) abhd2a (ENSMZEG00005012251) ENSMZEG00005012269 slc39a1 (ENSMZEG00005012287) STOM (ENSMZEG00005012297) ENSMZEG00005012309 tmem208 (ENSMZEG00005012330) smad6a (ENSMZEG00005012354) #22 SMAD3 (ENSMZEG00005012369) #23 map2k5 (ENSMZEG00005012392) skor1a (ENSMZEG00005012422) PIAS1 (ENSMZEG00005012429) ENSMZEG00005012461 ENSMZEG00005012470 UACA (ENSMZEG00005012517) TLE3 (ENSMZEG00005012572) kif23 (ENSMZEG00005012665) paqr5a (ENSMZEG00005012750) glceb (ENSMZEG00005012780) anp32a (ENSMZEG00005012845) CORO2B (ENSMZEG00005013278) itga11a (ENSMZEG00005013320) ENSMZEG00005013397 Eastern happy MODERN SPECIES dtwd1 (ENSACLG00000016942) ENSACLG00000016792 spata5l1 (ENSACLG00000016764) #31 zgc:153317 (ENSACLG00000016750) #30 slc30a4 (ENSACLG00000016688) #29 bloc1s6 (ENSACLG00000016660) #28 mibp2 (ENSACLG00000016621) HAPLN3 (ENSACLG00000016603) mfge8a (ENSACLG00000016536) abhd2a (ENSACLG00000016471) ENSACLG00000016438 slc39a1 (ENSACLG00000016397) ENSACLG00000016386 STOM (ENSACLG00000016358) tmem208 (ENSACLG00000016345) smad6a (ENSACLG00000016319) #22 SMAD3 (ENSACLG00000016303) #23 map2k5 (ENSACLG00000015946) skor1a (ENSACLG00000015826) PIAS1 (ENSACLG00000015737) ENSACLG00000015720 ENSACLG00000015610 UACA (ENSACLG00000015543) ENSACLG00000015492 TLE3 (ENSACLG00000015299) kif23 (ENSACLG00000015017) paqr5a (ENSACLG00000014930) ENSACLG00000014925 glceb (ENSACLG00000014893) anp32a (ENSACLG00000014426) CORO2B (ENSACLG00000014399) Lyretail cichlid MODERN SPECIES 320 ENSNBRG00000022427 spata5l1 (ENSNBRG00000022393) #31 zgc:153317 (ENSNBRG00000022374) #30 slc30a4 (ENSNBRG00000022345) #29 bloc1s6 (ENSNBRG00000022319) #28 mibp2 (ENSNBRG00000022296) HAPLN3 (ENSNBRG00000022217) mfge8a (ENSNBRG00000022184) abhd2a (ENSNBRG00000022158) ENSNBRG00000022124 ENSNBRG00000022117 slc39a1 (ENSNBRG00000022103) ENSNBRG00000022097 STOM (ENSNBRG00000022084) tmem208 (ENSNBRG00000022070) smad6a (ENSNBRG00000022000) #22 SMAD3 (ENSNBRG00000021957) #23 map2k5 (ENSNBRG00000021875) skor1a (ENSNBRG00000021849) PIAS1 (ENSNBRG00000021813) ENSNBRG00000021798 ENSNBRG00000021781 UACA (ENSNBRG00000021740) TLE3 (ENSNBRG00000021683) kif23 (ENSNBRG00000021562) paqr5a (ENSNBRG00000021452) glceb (ENSNBRG00000021430) anp32a (ENSNBRG00000021326) CORO2B (ENSNBRG00000021273) itga11a (ENSNBRG00000021060) ENSNBRG00000021011 Percomorphaceae_C ANCESTRAL SPECIES 11 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Percomorphaceae_D ANCESTRAL SPECIES 11 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Carangaria ANCESTRAL SPECIES 11 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Pleuronectoidei ANCESTRAL SPECIES 10 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p Turbot MODERN SPECIES 17 ENSSMAG00000025054 FGF7 (ENSSMAG00000021287) DTWD1 (ENSSMAG00000021289) ENSSMAG00000021288 spata5l1 (ENSSMAG00000021290) #31 zgc:153317 (ENSSMAG00000029975) #30 slc30a4 (ENSSMAG00000021292) #29 bloc1s6 (ENSSMAG00000021293) #28 mibp2 (ENSSMAG00000021294) HAPLN3 (ENSSMAG00000030247) MFGE8 (ENSSMAG00000021296) abhd2a (ENSSMAG00000021297) ENSSMAG00000021298 slc39a1 (ENSSMAG00000034740) ENSSMAG00000021300 smad6a (ENSSMAG00000021301) #22 ENSSMAG00000021302 #23 map2k5 (ENSSMAG00000021303) skor1a (ENSSMAG00000017446) PIAS1 (ENSSMAG00000021305) ENSSMAG00000021306 ENSSMAG00000021307 UACA (ENSSMAG00000021308) ENSSMAG00000021309 KIF23 (ENSSMAG00000021310) ENSSMAG00000021311 grk1a (ENSSMAG00000021312) ENSSMAG00000021313 pros1 (ENSSMAG00000021314) ENSSMAG00000021316 ENSSMAG00000021317 Tongue sole MODERN SPECIES 15 cops2 (ENSCSEG00000012761) fgf7 (ENSCSEG00000012750) dtwd1 (ENSCSEG00000012745) ENSCSEG00000012721 spata5l1 (ENSCSEG00000012712) #31 zgc:153317 (ENSCSEG00000012700) #30 slc30a4 (ENSCSEG00000012686) #29 bloc1s6 (ENSCSEG00000012676) #28 mibp2 (ENSCSEG00000012672) HAPLN3 (ENSCSEG00000012667) mfge8a (ENSCSEG00000012660) abhd2a (ENSCSEG00000012650) ENSCSEG00000012628 slc39a1 (ENSCSEG00000012617) tmem208 (ENSCSEG00000012613) SMAD6 (ENSCSEG00000012602) #22 SMAD3 (ENSCSEG00000012585) #23 map2k5 (ENSCSEG00000012573) ccnd1 (ENSCSEG00000012564) vstm2b (ENSCSEG00000012557) scg3 (ENSCSEG00000012546) lysmd2 (ENSCSEG00000012539) tmod2 (ENSCSEG00000012523) leo1 (ENSCSEG00000012502) mapk6 (ENSCSEG00000012488) ENSCSEG00000012481 USP8 (ENSCSEG00000012449) hdc (ENSCSEG00000010006) slc27a2a (ENSCSEG00000009981) gatm (ENSCSEG00000009953) #32 pde8a (ENSCSEG00000009892) Carangaria_A ANCESTRAL SPECIES 19 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Barramundi perch MODERN SPECIES 96 cops2 (ENSLCAG00010001882) fgf7 (ENSLCAG00010001876) dtwd1 (ENSLCAG00010001874) ENSLCAG00010001461 spata5l1 (ENSLCAG00010001260) #31 zgc:153317 (ENSLCAG00010001243) #30 slc30a4 (ENSLCAG00010001238) #29 bloc1s6 (ENSLCAG00010001233) #28 mibp2 (ENSLCAG00010001214) HAPLN3 (ENSLCAG00010001202) mfge8a (ENSLCAG00010001190) abhd2a (ENSLCAG00010001176) ENSLCAG00010001169 slc39a1 (ENSLCAG00010001163) tmem208 (ENSLCAG00010001154) smad6a (ENSLCAG00010001144) #22 SMAD3 (ENSLCAG00010001077) #23 map2k5 (ENSLCAG00010001045) skor1a (ENSLCAG00010001038) PIAS1 (ENSLCAG00010001027) ENSLCAG00010001024 ENSLCAG00010001017 UACA (ENSLCAG00010001004) TLE3 (ENSLCAG00010000716) kif23 (ENSLCAG00010000311) paqr5a (ENSLCAG00010000180) glceb (ENSLCAG00010021542) anp32a (ENSLCAG00010021535) CORO2B (ENSLCAG00010021461) itga11a (ENSLCAG00010021386) ENSLCAG00010021364 Seriola ANCESTRAL SPECIES 73 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00940000157231.b ENSGT00950000183058.A.a.d ENSGT00950000183058.A.b.b ENSGT00390000018895.a ENSGT00390000000155.a.a Greater amberjack MODERN SPECIES 242 cops2 (ENSSDUG00000016388) fgf7 (ENSSDUG00000016430) dtwd1 (ENSSDUG00000016453) ENSSDUG00000016471 spata5l1 (ENSSDUG00000016519) #31 zgc:153317 (ENSSDUG00000016526) #30 slc30a4 (ENSSDUG00000016531) #29 bloc1s6 (ENSSDUG00000016550) #28 mibp2 (ENSSDUG00000016586) HAPLN3 (ENSSDUG00000016925) mfge8a (ENSSDUG00000016943) abhd2a (ENSSDUG00000016969) ENSSDUG00000017002 slc39a1 (ENSSDUG00000017030) tmem208 (ENSSDUG00000017044) smad6a (ENSSDUG00000017082) #22 SMAD3 (ENSSDUG00000017091) #23 map2k5 (ENSSDUG00000017109) skor1a (ENSSDUG00000017148) PIAS1 (ENSSDUG00000017186) ENSSDUG00000017219 ENSSDUG00000017240 UACA (ENSSDUG00000017296) TLE3 (ENSSDUG00000017338) kif23 (ENSSDUG00000017423) paqr5a (ENSSDUG00000017537) gpa33a (ENSSDUG00000017645) ENSSDUG00000017688 ildr1a (ENSSDUG00000017720) tmem39a (ENSSDUG00000017772) PRSS23 (ENSSDUG00000017799) Yellowtail amberjack MODERN SPECIES 2930 cops2 (ENSSLDG00000009174) fgf7 (ENSSLDG00000009222) dtwd1 (ENSSLDG00000009340) ENSSLDG00000009249 spata5l1 (ENSSLDG00000009352) #31 zgc:153317 (ENSSLDG00000009371) #30 slc30a4 (ENSSLDG00000009443) #29 bloc1s6 (ENSSLDG00000009498) #28 mibp2 (ENSSLDG00000009812) HAPLN3 (ENSSLDG00000010248) mfge8a (ENSSLDG00000010267) abhd2a (ENSSLDG00000010303) rlbp1a (ENSSLDG00000010365) slc39a1 (ENSSLDG00000010382) tmem208 (ENSSLDG00000010399) smad6a (ENSSLDG00000010424) #22 SMAD3 (ENSSLDG00000010443) #23 map2k5 (ENSSLDG00000010494) skor1a (ENSSLDG00000010569) PIAS1 (ENSSLDG00000010594) ENSSLDG00000010659 ENSSLDG00000010683 UACA (ENSSLDG00000010731) TLE3 (ENSSLDG00000010840) kif23 (ENSSLDG00000010981) paqr5a (ENSSLDG00000011203) ENSSLDG00000011227 ENSSLDG00000011255 ildr1a (ENSSLDG00000011305) tmem39a (ENSSLDG00000011350) PRSS23 (ENSSLDG00000011393) Anabantaria ANCESTRAL SPECIES 11 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Zig-zag eel MODERN SPECIES 17 SECISBP2L (ENSMAMG00000011674) COPS2 (ENSMAMG00000011732) FGF7 (ENSMAMG00000011783) dtwd1 (ENSMAMG00000026826) ENSMAMG00000011790 spata5l1 (ENSMAMG00000011820) #31 zgc:153317 (ENSMAMG00000011844) #30 slc30a4 (ENSMAMG00000011974) #29 bloc1s6 (ENSMAMG00000012006) #28 mibp2 (ENSMAMG00000012031) MFGE8 (ENSMAMG00000012053) abhd2a (ENSMAMG00000012096) ENSMAMG00000028309 slc39a1 (ENSMAMG00000012122) ENSMAMG00000012132 smad6a (ENSMAMG00000012145) #22 ENSMAMG00000012151 #23 map2k5 (ENSMAMG00000012181) skor1a (ENSMAMG00000012260) PIAS1 (ENSMAMG00000012267) ENSMAMG00000012294 ENSMAMG00000012298 UACA (ENSMAMG00000012323) TLE3 (ENSMAMG00000012393) KIF23 (ENSMAMG00000012444) paqr5a (ENSMAMG00000012518) glceb (ENSMAMG00000012531) anp32a (ENSMAMG00000012549) CORO2B (ENSMAMG00000012992) itga11a (ENSMAMG00000013043) ENSMAMG00000013288 Anabantoidei ANCESTRAL SPECIES 8 ENSGT00490000043356.a ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Siamese fighting fish MODERN SPECIES 14 vps35 (ENSBSLG00000011880) EFL1 (ENSBSLG00000012274) mex3b (ENSBSLG00000012539) TMC3 (ENSBSLG00000013204) STARD5 (ENSBSLG00000013516) ENSBSLG00000013538 ENSBSLG00000013562 ENSBSLG00000013565 TLNRD1 (ENSBSLG00000013582) mesd (ENSBSLG00000013590) CEMIP (ENSBSLG00000013631) abhd17c (ENSBSLG00000013888) arnt2 (ENSBSLG00000013944) slc39a1 (ENSBSLG00000015065) tmem208 (ENSBSLG00000015071) smad6a (ENSBSLG00000015189) #22 SMAD3 (ENSBSLG00000015371) #23 map2k5 (ENSBSLG00000015497) skor1a (ENSBSLG00000015827) PIAS1 (ENSBSLG00000015831) ENSBSLG00000015843 ENSBSLG00000015851 UACA (ENSBSLG00000015891) TLE3 (ENSBSLG00000015954) ENSBSLG00000016193 kif23 (ENSBSLG00000016203) ccnb2 (ENSBSLG00000003737) crybgx (ENSBSLG00000003749) lctla (ENSBSLG00000003847) #21 tipin (ENSBSLG00000003982) #16 dis3l (ENSBSLG00000003997) #15 Climbing perch MODERN SPECIES 16 SECISBP2L (ENSATEG00000018252) COPS2 (ENSATEG00000018268) fgf7 (ENSATEG00000018281) dtwd1 (ENSATEG00000029513) ENSATEG00000018300 spata5l1 (ENSATEG00000018358) #31 zgc:153317 (ENSATEG00000018366) #30 slc30a4 (ENSATEG00000018417) #29 bloc1s6 (ENSATEG00000026597) #28 mibp2 (ENSATEG00000018455) MFGE8 (ENSATEG00000018480) abhd2a (ENSATEG00000018488) ENSATEG00000018520 slc39a1 (ENSATEG00000028960) ENSATEG00000025806 smad6a (ENSATEG00000018586) #22 ENSATEG00000018596 #23 ENSATEG00000013157 map2k5 (ENSATEG00000018621) skor1a (ENSATEG00000018667) PIAS1 (ENSATEG00000018702) ENSATEG00000018750 ENSATEG00000018759 UACA (ENSATEG00000018820) ENSATEG00000029029 TLE3 (ENSATEG00000018867) KIF23 (ENSATEG00000018953) paqr5a (ENSATEG00000019041) glceb (ENSATEG00000029034) anp32a (ENSATEG00000019093) CORO2B (ENSATEG00000019122) Eupercaria ANCESTRAL SPECIES 14 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Eupecaria_A ANCESTRAL SPECIES 15 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Ballan wrasse MODERN SPECIES 104 senp8 (ENSLBEG00000018189) GRAMD2A (ENSLBEG00000018218) znf609b (ENSLBEG00000018286) trip4 (ENSLBEG00000018354) chrna7a (ENSLBEG00000018486) ENSLBEG00000018521 calml4a (ENSLBEG00000018565) ADAMTS7 (ENSLBEG00000018586) ENSLBEG00000018644 itga11a (ENSLBEG00000018674) CORO2B (ENSLBEG00000018741) anp32a (ENSLBEG00000018773) rlbp1a (ENSLBEG00000018790) slc39a1 (ENSLBEG00000018824) tmem208 (ENSLBEG00000018834) smad6a (ENSLBEG00000018875) #22 SMAD3 (ENSLBEG00000018909) #23 map2k5 (ENSLBEG00000018972) skor1a (ENSLBEG00000019091) PIAS1 (ENSLBEG00000019115) ENSLBEG00000019169 ENSLBEG00000019201 Eupecaria_B ANCESTRAL SPECIES 15 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Perciformes ANCESTRAL SPECIES 15 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Cottioidei ANCESTRAL SPECIES 13 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Lumpfish MODERN SPECIES 18 cops2 (ENSCLMG00005020324) fgf7 (ENSCLMG00005020325) dtwd1 (ENSCLMG00005020326) ENSCLMG00005020328 spata5l1 (ENSCLMG00005020375) #31 zgc:153317 (ENSCLMG00005020377) #30 slc30a4 (ENSCLMG00005020379) #29 bloc1s6 (ENSCLMG00005020380) #28 mibp2 (ENSCLMG00005020381) HAPLN3 (ENSCLMG00005020382) MFGE8 (ENSCLMG00005020383) abhd2a (ENSCLMG00005020764) rlbp1a (ENSCLMG00005020766) slc39a1 (ENSCLMG00005020767) tmem208 (ENSCLMG00005020768) smad6a (ENSCLMG00005020770) #22 SMAD3 (ENSCLMG00005020772) #23 map2k5 (ENSCLMG00005020775) skor1a (ENSCLMG00005020777) PIAS1 (ENSCLMG00005020781) ENSCLMG00005020791 ENSCLMG00005020792 UACA (ENSCLMG00005020794) TLE3 (ENSCLMG00005020805) KIF23 (ENSCLMG00005021061) paqr5a (ENSCLMG00005021317) glceb (ENSCLMG00005021318) anp32a (ENSCLMG00005021319) CORO2B (ENSCLMG00005021320) itga11a (ENSCLMG00005021322) ENSCLMG00005021328 Stickleback MODERN SPECIES 1 cops2 (ENSGACG00000016790) fgf7 (ENSGACG00000016807) dtwd1 (ENSGACG00000016809) ENSGACG00000016813 spata5l1 (ENSGACG00000016834) #31 slc30a4 (ENSGACG00000016836) #29 bloc1s6 (ENSGACG00000016843) #28 mibp2 (ENSGACG00000016845) HAPLN3 (ENSGACG00000016853) mfge8a (ENSGACG00000016860) abhd2a (ENSGACG00000016866) rlbp1a (ENSGACG00000016871) ENSGACG00000016872 slc39a1 (ENSGACG00000016873) tmem208 (ENSGACG00000016875) smad6a (ENSGACG00000016878) #22 SMAD3 (ENSGACG00000016882) #23 map2k5 (ENSGACG00000016884) skor1a (ENSGACG00000016891) PIAS1 (ENSGACG00000016894) ENSGACG00000016895 ENSGACG00000016897 UACA (ENSGACG00000016909) TLE3 (ENSGACG00000016913) kif23 (ENSGACG00000016920) paqr5a (ENSGACG00000016926) glceb (ENSGACG00000016931) anp32a (ENSGACG00000016932) CORO2B (ENSGACG00000016936) itga11a (ENSGACG00000016944) ENSGACG00000016952 Perciformes_a ANCESTRAL SPECIES 13 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Channel bull blenny MODERN SPECIES 17 cops2 (ENSCGOG00000013394) fgf7 (ENSCGOG00000013386) dtwd1 (ENSCGOG00000013385) ENSCGOG00000012050 spata5l1 (ENSCGOG00000012018) #31 zgc:153317 (ENSCGOG00000012017) #30 slc30a4 (ENSCGOG00000011952) #29 bloc1s6 (ENSCGOG00000011946) #28 mibp2 (ENSCGOG00000011896) HAPLN3 (ENSCGOG00000011875) mfge8a (ENSCGOG00000011837) abhd2a (ENSCGOG00000011430) rlbp1a (ENSCGOG00000011827) slc39a1 (ENSCGOG00000011417) tmem208 (ENSCGOG00000011411) smad6a (ENSCGOG00000011407) #22 SMAD3 (ENSCGOG00000011028) #23 map2k5 (ENSCGOG00000011019) skor1a (ENSCGOG00000011015) PIAS1 (ENSCGOG00000010586) ENSCGOG00000010561 ENSCGOG00000010458 UACA (ENSCGOG00000010448) TLE3 (ENSCGOG00000004700) kif23 (ENSCGOG00000003399) paqr5a (ENSCGOG00000003316) glceb (ENSCGOG00000003305) anp32a (ENSCGOG00000003301) CORO2B (ENSCGOG00000003143) itga11a (ENSCGOG00000003093) ENSCGOG00000003088 Pike perch MODERN SPECIES 83 mfsd4ab (ENSSLUG00000022667) pm20d1.2 (ENSSLUG00000022301) ENSSLUG00000022233 ENSSLUG00000021873 ENSSLUG00000020413 NFASC (ENSSLUG00000020174) ENSSLUG00000020163 slc16a7 (ENSSLUG00000020153) syt9b (ENSSLUG00000020146) HAPLN3 (ENSSLUG00000020090) mfge8a (ENSSLUG00000019421) abhd2a (ENSSLUG00000019221) rlbp1a (ENSSLUG00000019193) slc39a1 (ENSSLUG00000019185) tmem208 (ENSSLUG00000019177) smad6a (ENSSLUG00000019173) #22 SMAD3 (ENSSLUG00000019159) #23 map2k5 (ENSSLUG00000019102) skor1a (ENSSLUG00000019082) PIAS1 (ENSSLUG00000018888) ENSSLUG00000018849 ENSSLUG00000018706 UACA (ENSSLUG00000018662) TLE3 (ENSSLUG00000018010) Eupecaria_C ANCESTRAL SPECIES 11 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Gilthead seabream MODERN SPECIES 18 fgf7 (ENSSAUG00010002544) dtwd1 (ENSSAUG00010002543) ENSSAUG00010002030 spata5l1 (ENSSAUG00010001992) #31 zgc:153317 (ENSSAUG00010001990) #30 slc30a4 (ENSSAUG00010001988) #29 bloc1s6 (ENSSAUG00010001982) #28 mibp2 (ENSSAUG00010001974) HAPLN3 (ENSSAUG00010001971) mfge8a (ENSSAUG00010001355) rlbp1a (ENSSAUG00010001297) abhd2a (ENSSAUG00010001289) ENSSAUG00010001286 slc39a1 (ENSSAUG00010001284) tmem208 (ENSSAUG00010001282) smad6a (ENSSAUG00010001276) #22 SMAD3 (ENSSAUG00010001244) #23 ENSSAUG00010001237 ENSSAUG00010001233 map2k5 (ENSSAUG00010001213) skor1a (ENSSAUG00010001195) PIAS1 (ENSSAUG00010001185) ENSSAUG00010001179 ENSSAUG00010001176 UACA (ENSSAUG00010001078) TLE3 (ENSSAUG00010000571) ENSSAUG00010000433 kif23 (ENSSAUG00010000357) paqr5a (ENSSAUG00010000298) glceb (ENSSAUG00010000286) ENSSAUG00010000277 Eupercaria_incertae_sedis ANCESTRAL SPECIES 7 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a European seabass MODERN SPECIES 18 SECISBP2L (ENSDLAG00005011688) COPS2 (ENSDLAG00005011741) FGF7 (ENSDLAG00005011794) dtwd1 (ENSDLAG00005011800) spata5l1 (ENSDLAG00005012044) #31 zgc:153317 (ENSDLAG00005012056) #30 ENSDLAG00005011812 bloc1s6 (ENSDLAG00005029813) #28 mibp2 (ENSDLAG00005012080) HAPLN3 (ENSDLAG00005012094) MFGE8 (ENSDLAG00005012122) abhd2a (ENSDLAG00005012210) ENSDLAG00005032428 slc39a1 (ENSDLAG00005012303) ENSDLAG00005028664 smad6a (ENSDLAG00005012334) #22 ENSDLAG00005012347 #23 map2k5 (ENSDLAG00005012424) skor1a (ENSDLAG00005012682) PIAS1 (ENSDLAG00005012766) ENSDLAG00005013277 ENSDLAG00005013288 UACA (ENSDLAG00005013331) TLE3 (ENSDLAG00005013590) KIF23 (ENSDLAG00005014683) paqr5a (ENSDLAG00005016531) glceb (ENSDLAG00005016598) anp32a (ENSDLAG00005031356) CORO2B (ENSDLAG00005034094) itga11a (ENSDLAG00005016823) ENSDLAG00005017414 Large yellow croaker MODERN SPECIES 480 cops2 (ENSLCRG00005000332) fgf7 (ENSLCRG00005000389) dtwd1 (ENSLCRG00005000391) ENSLCRG00005000460 spata5l1 (ENSLCRG00005005473) #31 zgc:153317 (ENSLCRG00005005477) #30 slc30a4 (ENSLCRG00005005479) #29 bloc1s6 (ENSLCRG00005005480) #28 mibp2 (ENSLCRG00005005482) HAPLN3 (ENSLCRG00005005483) mfge8a (ENSLCRG00005005484) abhd2a (ENSLCRG00005005487) ENSLCRG00005005803 slc39a1 (ENSLCRG00005005804) tmem208 (ENSLCRG00005005805) smad6a (ENSLCRG00005005807) #22 SMAD3 (ENSLCRG00005005810) #23 map2k5 (ENSLCRG00005005909) skor1a (ENSLCRG00005006374) PIAS1 (ENSLCRG00005006385) ENSLCRG00005006537 ENSLCRG00005006538 UACA (ENSLCRG00005006539) TLE3 (ENSLCRG00005006727) kif23 (ENSLCRG00005007885) paqr5a (ENSLCRG00005008119) glceb (ENSLCRG00005008122) anp32a (ENSLCRG00005008124) CORO2B (ENSLCRG00005008131) itga11a (ENSLCRG00005008190) ENSLCRG00005008193 Tetraodontidae ANCESTRAL SPECIES 4 ENSGT00530000063301.a.b ENSGT00940000159843 ENSGT00940000153766.B ENSGT00390000004624.a.b ENSGT00940000160700 #31 ENSGT00390000009277 #30 ENSGT00940000157545 #29 ENSGT00510000047812 #28 ENSGT00940000159842.qc ENSGT00940000159628.c ENSGT00940000156049.b ENSGT00950000182902.b.a.d.a ENSGT00940000164526.a ENSGT00940000164669 ENSGT00390000008139 ENSGT00940000158146.a #22 ENSGT00940000153499.b.b.d.a.a #23 ENSGT00940000157505 ENSGT00940000158440.g.a ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b ENSGT00950000182965.a.b.a.b ENSGT00940000157475 ENSGT01030000234519.e.b.k.a ENSGT00940000155837.p ENSGT00940000158844 ENSGT00390000006043 ENSGT00950000182907.a.b.b.b ENSGT00940000158689 ENSGT00940000155465.i ENSGT01030000234518.B.a.b.a.a Fugu DUPLICATION Fugu MODERN SPECIES 4 ENSTRUG00000016911 spata5l1 (ENSTRUG00000016910) #31 zgc:153317 (ENSTRUG00000016908) #30 slc30a4 (ENSTRUG00000019868) #29 bloc1s6 (ENSTRUG00000021749) #28 mibp2 (ENSTRUG00000016897) HAPLN3 (ENSTRUG00000016895) mfge8a (ENSTRUG00000016888) smad6a (ENSTRUG00000032173) #22 abhd2a (ENSTRUG00000016883) rlbp1a (ENSTRUG00000016880) slc39a1 (ENSTRUG00000016874) tmem208 (ENSTRUG00000026186) tmem208 (ENSTRUG00000016873) ENSTRUG00000029807 smad6a (ENSTRUG00000022333) #22 SMAD3 (ENSTRUG00000002512) #23 map2k5 (ENSTRUG00000016851) skor1a (ENSTRUG00000016849) PIAS1 (ENSTRUG00000016843) ENSTRUG00000016840 ENSTRUG00000016836 UACA (ENSTRUG00000016819) TLE3 (ENSTRUG00000016796) kif23 (ENSTRUG00000016789) paqr5a (ENSTRUG00000016784) glceb (ENSTRUG00000024535) anp32a (ENSTRUG00000028503) CORO2B (ENSTRUG00000016762) itga11a (ENSTRUG00000016742) ENSTRUG00000016739 Fugu MODERN SPECIES 4 SLC12A1 (ENSTRUG00000016959) dut (ENSTRUG00000016958) ENSTRUG00000026120 SECISBP2L (ENSTRUG00000016925) cops2 (ENSTRUG00000016921) fgf7 (ENSTRUG00000021359) dtwd1 (ENSTRUG00000016918) ENSTRUG00000016911 spata5l1 (ENSTRUG00000016910) #31 zgc:153317 (ENSTRUG00000016908) #30 slc30a4 (ENSTRUG00000019868) #29 bloc1s6 (ENSTRUG00000021749) #28 mibp2 (ENSTRUG00000016897) HAPLN3 (ENSTRUG00000016895) mfge8a (ENSTRUG00000016888) smad6a (ENSTRUG00000032173) #22 abhd2a (ENSTRUG00000016883) rlbp1a (ENSTRUG00000016880) slc39a1 (ENSTRUG00000016874) tmem208 (ENSTRUG00000026186) tmem208 (ENSTRUG00000016873) ENSTRUG00000029807 smad6a (ENSTRUG00000022333) #22 SMAD3 (ENSTRUG00000002512) #23 map2k5 (ENSTRUG00000016851) skor1a (ENSTRUG00000016849) PIAS1 (ENSTRUG00000016843) ENSTRUG00000016840 ENSTRUG00000016836 UACA (ENSTRUG00000016819) TLE3 (ENSTRUG00000016796) Tetraodon MODERN SPECIES 20 FBN1 (ENSTNIG00000009530) SECISBP2L (ENSTNIG00000009531) cops2 (ENSTNIG00000009532) FGF7 (ENSTNIG00000009533) dtwd1 (ENSTNIG00000009534) ENSTNIG00000009535 spata5l1 (ENSTNIG00000009536) #31 slc30a4 (ENSTNIG00000009537) #29 bloc1s6 (ENSTNIG00000009538) #28 mibp2 (ENSTNIG00000009539) HAPLN3 (ENSTNIG00000009540) mfge8a (ENSTNIG00000009541) abhd2a (ENSTNIG00000009542) rlbp1a (ENSTNIG00000009543) slc39a1 (ENSTNIG00000009544) smad6a (ENSTNIG00000009545) #22 SMAD3 (ENSTNIG00000009546) #23 map2k5 (ENSTNIG00000009547) skor1a (ENSTNIG00000009548) PIAS1 (ENSTNIG00000009549) ENSTNIG00000009550 ENSTNIG00000009551 UACA (ENSTNIG00000009552) TLE3 (ENSTNIG00000009554) kif23 (ENSTNIG00000009555) paqr5a (ENSTNIG00000009556) glceb (ENSTNIG00000009557) anp32a (ENSTNIG00000009558) CORO2B (ENSTNIG00000009559) itga11a (ENSTNIG00000009560) ENSTNIG00000009561 Pinecone sodierfish MODERN SPECIES 17 vstm2b (ENSMMDG00005011752) uqcrfs1 (ENSMMDG00005011753) shcbp1 (ENSMMDG00005011760) hrh3 (ENSMMDG00005011947) vps35 (ENSMMDG00005012005) orc6 (ENSMMDG00005012351) mylk3 (ENSMMDG00005012352) zgc:92818 (ENSMMDG00005012354) lrp3 (ENSMMDG00005012355) slc7a10a (ENSMMDG00005012358) rhpn2 (ENSMMDG00005012374) cep89 (ENSMMDG00005013375) zgc:165481 (ENSMMDG00005013378) ABCC12 (ENSMMDG00005013387) tmem208 (ENSMMDG00005013549) smad6a (ENSMMDG00005013552) #22 ENSMMDG00005013629 SMAD3 (ENSMMDG00005013632) #23 map2k5 (ENSMMDG00005013634) skor1a (ENSMMDG00005013640) PIAS1 (ENSMMDG00005013642) ENSMMDG00005013674 ENSMMDG00005013682 UACA (ENSMMDG00005014056) TLE3 (ENSMMDG00005014073) kif23 (ENSMMDG00005017427) paqr5a (ENSMMDG00005017824) glceb (ENSMMDG00005018113) anp32a (ENSMMDG00005018115) CORO2B (ENSMMDG00005018117) itga11a (ENSMMDG00005018120) Cod MODERN SPECIES 5 ENSGMOG00000017333 ENSGMOG00000022836 ENSGMOG00000033955 ENSGMOG00000017408 ENSGMOG00000017430 CTSH (ENSGMOG00000017462) ENSGMOG00000017486 ENSGMOG00000017523 ENSGMOG00000017537 ENSGMOG00000034247 ENSGMOG00000017568 ENSGMOG00000001528 ENSGMOG00000001246 ENSGMOG00000001268 ENSGMOG00000001293 smad6a (ENSGMOG00000032620) #22 ENSGMOG00000008364 #23 map2k5 (ENSGMOG00000001328) skor1a (ENSGMOG00000035936) PIAS1 (ENSGMOG00000001390) ENSGMOG00000001426 ENSGMOG00000001435 UACA (ENSGMOG00000001457) tle3a (ENSGMOG00000001493) ENSGMOG00000031541 KIF23 (ENSGMOG00000015631) paqr5a (ENSGMOG00000015675) glceb (ENSGMOG00000015696) ENSGMOG00000015718 CORO2B (ENSGMOG00000015733) itga11a (ENSGMOG00000015758) Clupeocephala ANCESTRAL SPECIES 69 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a ENSGT00390000012069 ENSGT00940000165047 ENSGT00940000157760.g.b ENSGT00940000165330 Otomorpha ANCESTRAL SPECIES ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.b ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Clupeiformes ANCESTRAL SPECIES 358 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.a ENSGT01030000234518.B.a.b.a.b.j ENSGT00940000158440.h ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000235447 ENSGT00940000157475.s.b ENSGT01030000234519.e.b.i.a Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 19 ppcdc (ENSCHAG00000004502) hacd3 (ENSCHAG00000004038) ints14 (ENSCHAG00000003814) SLC24A1 (ENSCHAG00000003677) #7 dennd4a (ENSCHAG00000003270) #11 rab11a (ENSCHAG00000002433) #12 ENSCHAG00000000584 ##14 map2k1 (ENSCHAG00000000220) #17 snapc5 (ENSCHAG00000000160) #18 LCTL (ENSCHAG00000000142) #21 zwilch (ENSCHAG00000000117) #20 rpl4 (ENSCHAG00000023757) #19 map2k1 (ENSCHAG00000023747) #17 smad6b (ENSCHAG00000023735) #22 ENSCHAG00000023728 smad6b (ENSCHAG00000023725) #22 ENSCHAG00000023724 SMAD3 (ENSCHAG00000023688) #23 aagab (ENSCHAG00000023674) #24 iqch (ENSCHAG00000023667) #25 zgc:162898 (ENSCHAG00000023666) skor1b (ENSCHAG00000023652) PIAS1 (ENSCHAG00000023617) ENSCHAG00000023614 morf4l1 (ENSCHAG00000023342) ENSCHAG00000023330 ENSCHAG00000023324 TLE3 (ENSCHAG00000022577) vwf (ENSCHAG00000021723) ENSCHAG00000020858 ENSCHAG00000020773 Atlantic herring MODERN SPECIES 19 vwf (ENSCHAG00000021723) TLE3 (ENSCHAG00000022577) ENSCHAG00000023324 ENSCHAG00000023330 morf4l1 (ENSCHAG00000023342) ENSCHAG00000023614 PIAS1 (ENSCHAG00000023617) skor1b (ENSCHAG00000023652) zgc:162898 (ENSCHAG00000023666) iqch (ENSCHAG00000023667) #25 aagab (ENSCHAG00000023674) #24 SMAD3 (ENSCHAG00000023688) #23 ENSCHAG00000023724 smad6b (ENSCHAG00000023725) #22 ENSCHAG00000023728 smad6b (ENSCHAG00000023735) #22 map2k1 (ENSCHAG00000023747) #17 rpl4 (ENSCHAG00000023757) #19 zwilch (ENSCHAG00000000117) #20 LCTL (ENSCHAG00000000142) #21 snapc5 (ENSCHAG00000000160) #18 map2k1 (ENSCHAG00000000220) #17 ENSCHAG00000000584 ##14 rab11a (ENSCHAG00000002433) #12 dennd4a (ENSCHAG00000003270) #11 SLC24A1 (ENSCHAG00000003677) #7 ints14 (ENSCHAG00000003814) hacd3 (ENSCHAG00000004038) ppcdc (ENSCHAG00000004502) ENSCHAG00000004518 arih1 (ENSCHAG00000004536) Denticle herring DUPLICATION Denticle herring MODERN SPECIES 250 ENSDCDG00000013325 ENSDCDG00000013794 miox (ENSDCDG00000013799) c2cd5 (ENSDCDG00000013815) tnni1c (ENSDCDG00000014094) ENSDCDG00000008246 calub (ENSDCDG00000008275) utp15 (ENSDCDG00000008300) ENSDCDG00000008348 fkbp4 (ENSDCDG00000008364) ddx11 (ENSDCDG00000008424) wash1 (ENSDCDG00000008442) ENSDCDG00000008487 IQSEC3 (ENSDCDG00000008496) ENSDCDG00000008628 smad6b (ENSDCDG00000008732) #22 SMAD3 (ENSDCDG00000008756) #23 zgc:162898 (ENSDCDG00000008909) ENSDCDG00000008917 SMAD3 (ENSDCDG00000008938) #23 SMAD6 (ENSDCDG00000008951) #22 ENSDCDG00000009004 Denticle herring MODERN SPECIES 250 ENSDCDG00000009004 SMAD6 (ENSDCDG00000008951) #22 SMAD3 (ENSDCDG00000008938) #23 ENSDCDG00000008917 zgc:162898 (ENSDCDG00000008909) SMAD3 (ENSDCDG00000008756) #23 smad6b (ENSDCDG00000008732) #22 ENSDCDG00000008628 IQSEC3 (ENSDCDG00000008496) ENSDCDG00000008487 wash1 (ENSDCDG00000008442) ddx11 (ENSDCDG00000008424) fkbp4 (ENSDCDG00000008364) ENSDCDG00000008348 utp15 (ENSDCDG00000008300) calub (ENSDCDG00000008275) ENSDCDG00000008246 Otophysi ANCESTRAL SPECIES 4 ENSGT00390000015052 #26 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.i #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.b ENSGT01030000234518.B.a.b.a.b.j ENSGT00950000182965.a.b.a.a ENSGT01030000235447 ENSGT00940000157475.s.b ENSGT01030000234519.e.b.j.b.a ENSGT00940000155837 ENSGT00940000158844.l ENSGT00510000047881 ENSGT00990000203778 Characiphysae ANCESTRAL SPECIES 8 ENSGT00390000015052 #26 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.i #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.b ENSGT01030000234518.B.a.b.a.b.j ENSGT00950000182965.a.b.a.a ENSGT01030000235447 ENSGT00940000157475.s.b ENSGT01030000234519.e.b.j.b.a ENSGT00940000155837 ENSGT00940000158844.l ENSGT00510000047881 ENSGT00990000203778 Channel catfish MODERN SPECIES 23 arl2bp (ENSIPUG00000020669) #26 arih1 (ENSIPUG00000020676) c4h15orf39 (ENSIPUG00000021229) ppcdc (ENSIPUG00000021242) hacd3 (ENSIPUG00000021269) vwa9 (ENSIPUG00000021289) slc24a1 (ENSIPUG00000021316) #7 dennd4a (ENSIPUG00000021338) #11 Rab11a (ENSIPUG00000021401) #12 megf11 (ENSIPUG00000021414) ##14 map2k1 (ENSIPUG00000021471) #17 rpl4-b (ENSIPUG00000021502) #19 zwilch (ENSIPUG00000021572) #20 LCTL (ENSIPUG00000021616) #21 snapc5 (ENSIPUG00000021633) #18 SMAD6 (ENSIPUG00000021637) #22 smad3b (ENSIPUG00000021649) #23 AAGAB (ENSIPUG00000021694) #24 iqch (ENSIPUG00000021716) #25 c4h15orf61 (ENSIPUG00000021762) skor1b (ENSIPUG00000022829) PIAS1 (ENSIPUG00000022852) morf4l1 (ENSIPUG00000022885) ENSIPUG00000022933 gro2 (ENSIPUG00000022942) kif23 (ENSIPUG00000022986) paqr5a (ENSIPUG00000023028) KBTBD4 (ENSIPUG00000023030) rapsn (ENSIPUG00000023032) ighmbp2 (ENSIPUG00000023036) agk (ENSIPUG00000023045) Characiphysae_b ANCESTRAL SPECIES 4 ENSGT00390000015052 #26 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.i #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.b ENSGT01030000234518.B.a.b.a.b.j ENSGT00950000182965.a.b.a.a ENSGT01030000235447 ENSGT00940000157475.s.b ENSGT01030000234519.e.b.j.b.a ENSGT00940000155837 ENSGT00940000158844.l ENSGT00510000047881 ENSGT00990000203778 Characoidei ANCESTRAL SPECIES 30 ENSGT00390000015052 #26 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.i #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.b ENSGT01030000234518.B.a.b.a.b.j ENSGT00950000182965.a.b.a.a ENSGT00940000157475.t ENSGT01030000235447 ENSGT00940000157475.s.b ENSGT01030000234519.e.b.j.b.a ENSGT00940000155837 ENSGT00940000158844.l ENSGT00510000047881 Mexicana tetra MODERN SPECIES 9 arih1 (ENSAMXG00000003281) ENSAMXG00000003257 ppcdc (ENSAMXG00000038023) hacd3 (ENSAMXG00000036622) ints14 (ENSAMXG00000003207) SLC24A1 (ENSAMXG00000003180) #7 dennd4a (ENSAMXG00000003173) #11 rab11a (ENSAMXG00000003155) #12 ENSAMXG00000003031 ##14 map2k1 (ENSAMXG00000003000) #17 rpl4 (ENSAMXG00000029678) #19 zwilch (ENSAMXG00000042209) #20 LCTL (ENSAMXG00000002915) #21 snapc5 (ENSAMXG00000035746) #18 ENSAMXG00000042016 smad6b (ENSAMXG00000002889) #22 smad3b (ENSAMXG00000002880) #23 aagab (ENSAMXG00000034247) #24 iqch (ENSAMXG00000002847) #25 zgc:162898 (ENSAMXG00000002824) ENSAMXG00000039689 skor1b (ENSAMXG00000002804) PIAS1 (ENSAMXG00000002784) morf4l1 (ENSAMXG00000002753) ENSAMXG00000040454 ENSAMXG00000035462 tle3a (ENSAMXG00000000547) kif23 (ENSAMXG00000000541) paqr5a (ENSAMXG00000034830) ddb2 (ENSAMXG00000000525) ENSAMXG00000033486 Red-bellied piranha MODERN SPECIES arl2bp (ENSPNAG00000015169) #26 arih1 (ENSPNAG00000015135) ENSPNAG00000015080 ppcdc (ENSPNAG00000015060) hacd3 (ENSPNAG00000015056) ints14 (ENSPNAG00000015024) SLC24A1 (ENSPNAG00000003338) #7 dennd4a (ENSPNAG00000014917) #11 rab11a (ENSPNAG00000014863) #12 ENSPNAG00000014837 ##14 map2k1 (ENSPNAG00000014728) #17 rpl4 (ENSPNAG00000014698) #19 zwilch (ENSPNAG00000014620) #20 LCTL (ENSPNAG00000003168) #21 snapc5 (ENSPNAG00000014521) #18 smad6b (ENSPNAG00000014508) #22 smad3b (ENSPNAG00000003144) #23 aagab (ENSPNAG00000014473) #24 iqch (ENSPNAG00000014434) #25 zgc:162898 (ENSPNAG00000003117) skor1b (ENSPNAG00000014398) PIAS1 (ENSPNAG00000014367) ENSPNAG00000014295 morf4l1 (ENSPNAG00000014280) ENSPNAG00000014247 tle3a (ENSPNAG00000003051) kif23 (ENSPNAG00000014143) paqr5a (ENSPNAG00000014000) ddb2 (ENSPNAG00000013976) ENSPNAG00000013945 kbtbd4 (ENSPNAG00000002995) Electric eel MODERN SPECIES 418 smad6b (ENSEEEG00000009587) #22 smad3b (ENSEEEG00000009600) #23 aagab (ENSEEEG00000009726) #24 iqch (ENSEEEG00000009734) #25 zgc:162898 (ENSEEEG00000009736) skor1b (ENSEEEG00000009737) PIAS1 (ENSEEEG00000009745) morf4l1 (ENSEEEG00000009806) ENSEEEG00000010279 TLE3 (ENSEEEG00000010301) ENSEEEG00000010685 kif23 (ENSEEEG00000010714) paqr5a (ENSEEEG00000011027) ddb2 (ENSEEEG00000011028) kbtbd4 (ENSEEEG00000011030) rapsn (ENSEEEG00000011031) Cyprinoidei ANCESTRAL SPECIES 10 ENSGT00390000015052 #26 ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.B #11 ENSGT00940000154914 #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.i #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.b ENSGT01030000234518.B.a.b.a.b.j ENSGT00950000182965.a.b.a.a ENSGT01030000235447 ENSGT00940000157475.s.b ENSGT01030000234519.e.b.j.b.a ENSGT00940000155837 ENSGT00940000158844.l ENSGT00510000047881 ENSGT00940000158775 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 74 ENSGT00390000015052.a #26 ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b ENSGT00390000009486.f ENSGT01030000234532.B.e.b.f.a #7 ENSGT00940000155836.B.d #11 ENSGT00940000154914.ub #12 ENSGT00940000155333.A.b.a ##14 ENSGT00940000153487.b.b.t #17 ENSGT00390000018145.e #19 ENSGT00390000013696 #20 ENSGT00940000157369.a.d #21 ENSGT00390000010331.m #18 ENSGT00940000158146.b.e #22 ENSGT00940000153499.b.b.d.a.b.i.a #23 ENSGT00390000007218.r #24 ENSGT00390000008908.b #25 ENSGT00390000015942 ENSGT00940000158440.g.b.b ENSGT01030000234539.a.a.b.a.b.b.a ENSGT00950000182965.a.b.a.a.c ENSGT01030000235447 ENSGT00940000157475.s.b.b ENSGT01030000234519.e.b.j.b.a.b Goldfish MODERN SPECIES 9 arl2bp (ENSCARG00000011894) #26 arih1 (ENSCARG00000011916) ENSCARG00000011988 ppcdc (ENSCARG00000011991) hacd3 (ENSCARG00000012002) ints14 (ENSCARG00000012147) SLC24A1 (ENSCARG00000012194) #7 dennd4a (ENSCARG00000012263) #11 rab11a (ENSCARG00000013410) #12 ENSCARG00000013448 ##14 map2k1 (ENSCARG00000013618) #17 rpl4 (ENSCARG00000013743) #19 zwilch (ENSCARG00000013771) #20 LCTL (ENSCARG00000013798) #21 snapc5 (ENSCARG00000013818) #18 smad6b (ENSCARG00000013826) #22 smad3b (ENSCARG00000013852) #23 aagab (ENSCARG00000013875) #24 iqch (ENSCARG00000013907) #25 zgc:162898 (ENSCARG00000013951) skor1b (ENSCARG00000013956) PIAS1 (ENSCARG00000013991) ENSCARG00000014119 morf4l1 (ENSCARG00000014135) ENSCARG00000014215 tle3a (ENSCARG00000014265) ENSCARG00000015092 kif23 (ENSCARG00000015149) paqr5a (ENSCARG00000016813) ddb2 (ENSCARG00000016846) kbtbd4 (ENSCARG00000016868) Cyprininae_a ANCESTRAL SPECIES 15 ENSGT00390000015052.a #26 ENSGT00940000155744.g.b ENSGT00940000169185.b ENSGT00440000038107.p ENSGT00530000062962.b.a.f.b ENSGT00390000009486.f ENSGT01030000234532.B.e.b.f.a #7 ENSGT00940000155836.B.d #11 ENSGT00940000154914.ub #12 ENSGT00940000155333.A.b.a ##14 ENSGT00940000153487.b.b.t #17 ENSGT00390000018145.e #19 ENSGT00390000013696.e #20 ENSGT00940000157369.a.d #21 ENSGT00390000010331.m #18 ENSGT00940000158146.b.e #22 ENSGT00940000153499.b.b.d.a.b.i.a #23 ENSGT00390000007218.r #24 ENSGT00390000008908.b #25 ENSGT00390000015942 ENSGT00940000158440.g.b.b ENSGT01030000234539.a.a.b.a.b.b.a ENSGT00950000182965.a.b.a.a.c ENSGT01030000235447.a ENSGT00940000157475.s.b.b ENSGT01030000234519.e.b.j.b.a.b ENSGT00940000155837.q ENSGT00510000047881.e ENSGT00940000158775.i ENSGT00390000016785.f ENSGT00930000151035.a.a Common carp reference MODERN SPECIES 19 arl2bp (ENSCCRG00000058906) #26 arih1 (ENSCCRG00000005206) ENSCCRG00000071734 ppcdc (ENSCCRG00000072999) hacd3 (ENSCCRG00000047136) ints14 (ENSCCRG00000017792) SLC24A1 (ENSCCRG00000009282) #7 ENSCCRG00000072431 dennd4a (ENSCCRG00000009528) #11 rab11a (ENSCCRG00000009402) #12 ENSCCRG00000073950 ##14 map2k1 (ENSCCRG00000077344) #17 zwilch (ENSCCRG00000034439) #20 LCTL (ENSCCRG00000017070) #21 snapc5 (ENSCCRG00000078719) #18 smad6b (ENSCCRG00000017061) #22 smad3b (ENSCCRG00000067387) #23 aagab (ENSCCRG00000016912) #24 iqch (ENSCCRG00000077345) #25 skor1b (ENSCCRG00000014176) PIAS1 (ENSCCRG00000030976) morf4l1 (ENSCCRG00000043359) ENSCCRG00000076672 tle3a (ENSCCRG00000030091) kif23 (ENSCCRG00000015859) ddb2 (ENSCCRG00000061260) kbtbd4 (ENSCCRG00000057703) rapsn (ENSCCRG00000018870) ENSCCRG00000019411 ighmbp2 (ENSCCRG00000068382) agk (ENSCCRG00000019050) Golden-line barbel MODERN SPECIES 224 ppcdc (ENSSGRG00000053835) hacd3 (ENSSGRG00000053825) ints14 (ENSSGRG00000053784) SLC24A1 (ENSSGRG00000053777) #7 dennd4a (ENSSGRG00000053530) #11 rab11a (ENSSGRG00000053474) #12 ENSSGRG00000053461 ##14 map2k1 (ENSSGRG00000053371) #17 rpl4 (ENSSGRG00000053329) #19 zwilch (ENSSGRG00000053327) #20 LCTL (ENSSGRG00000053324) #21 snapc5 (ENSSGRG00000053323) #18 smad6b (ENSSGRG00000053322) #22 ENSSGRG00000053321 #23 aagab (ENSSGRG00000053318) #24 iqch (ENSSGRG00000053315) #25 zgc:162898 (ENSSGRG00000053314) ENSSGRG00000053214 ENSSGRG00000053206 morf4l1 (ENSSGRG00000053205) ENSSGRG00000053204 tle3a (ENSSGRG00000051652) ENSSGRG00000051635 kif23 (ENSSGRG00000051628) ddb2 (ENSSGRG00000051625) kbtbd4 (ENSSGRG00000051617) rapsn (ENSSGRG00000051616) ENSSGRG00000051614 Cyprininae ANCESTRAL SPECIES 123 ENSGT00940000156011.`b ENSGT00390000015052.b #26 ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a ENSGT00390000009486.e ENSGT01030000234532.B.e.b.f.b #7 ENSGT00940000155836.B.c #11 ENSGT00940000154914.tb #12 ENSGT00940000155333.A.b.b ##14 ENSGT00940000153487.b.b.s #17 ENSGT00390000018145.f #19 ENSGT00940000157369.a.c #21 ENSGT00390000010331.n #18 ENSGT00940000158146.b.f #22 ENSGT00940000153499.b.b.d.a.b.i.b #23 ENSGT00390000007218.q #24 ENSGT00390000008908.a #25 Goldfish MODERN SPECIES 37 pllp (ENSCARG00000064293) arl2bp (ENSCARG00000064261) #26 arih1 (ENSCARG00000063977) ENSCARG00000063954 ppcdc (ENSCARG00000063932) hacd3 (ENSCARG00000063827) ints14 (ENSCARG00000063746) SLC24A1 (ENSCARG00000063727) #7 dennd4a (ENSCARG00000062471) #11 rab11a (ENSCARG00000062368) #12 ENSCARG00000058612 ##14 map2k1 (ENSCARG00000057706) #17 rpl4 (ENSCARG00000057625) #19 LCTL (ENSCARG00000057492) #21 snapc5 (ENSCARG00000057463) #18 smad6b (ENSCARG00000057432) #22 smad3b (ENSCARG00000057166) #23 aagab (ENSCARG00000057137) #24 ENSCARG00000057132 skor1b (ENSCARG00000057106) ENSCARG00000057077 ENSCARG00000057062 ric8b (ENSCARG00000057023) rfx4 (ENSCARG00000056887) mlycd (ENSCARG00000056868) clns1a (ENSCARG00000056853) aqp11 (ENSCARG00000056843) pak1 (ENSCARG00000056359) GDPD4 (ENSCARG00000056300) ENSCARG00000056175 ompa (ENSCARG00000056164) Cyprininae_a ANCESTRAL SPECIES 131 ENSGT00390000015052.b #26 ENSGT00940000155744.g.a ENSGT00940000169185.a ENSGT00440000038107.o ENSGT00530000062962.b.a.f.a ENSGT00390000009486.e ENSGT01030000234532.B.e.b.f.b #7 ENSGT00940000155836.B.c #11 ENSGT00940000154914.tb #12 ENSGT00940000155333.A.b.b ##14 ENSGT00940000153487.b.b.s #17 ENSGT00390000018145.f #19 ENSGT00390000013696.f #20 ENSGT00940000157369.a.c #21 ENSGT00390000010331.n #18 ENSGT00940000158146.b.f #22 ENSGT00940000153499.b.b.d.a.b.i.b #23 ENSGT00390000007218.q #24 ENSGT00390000008908.a #25 Common carp reference MODERN SPECIES 9 pllp (ENSCCRG00000005176) arl2bp (ENSCCRG00000005183) #26 arih1 (ENSCCRG00000025952) ENSCCRG00000081007 ppcdc (ENSCCRG00000018299) hacd3 (ENSCCRG00000017852) ints14 (ENSCCRG00000047151) SLC24A1 (ENSCCRG00000066083) #7 dennd4a (ENSCCRG00000020231) #11 rab11a (ENSCCRG00000059058) #12 ENSCCRG00000009371 ##14 map2k1 (ENSCCRG00000035016) #17 rpl4 (ENSCCRG00000034465) #19 LCTL (ENSCCRG00000034940) #21 snapc5 (ENSCCRG00000076911) #18 smad6b (ENSCCRG00000028531) #22 smad3b (ENSCCRG00000014185) #23 aagab (ENSCCRG00000014234) #24 iqch (ENSCCRG00000014287) #25 ENSCCRG00000064665 skor1b (ENSCCRG00000043233) PIAS1 (ENSCCRG00000043261) ENSCCRG00000031056 morf4l1 (ENSCCRG00000031057) ENSCCRG00000064433 ENSCCRG00000043403 tle3a (ENSCCRG00000029847) kif23 (ENSCCRG00000004087) ddb2 (ENSCCRG00000018879) kbtbd4 (ENSCCRG00000019417) rapsn (ENSCCRG00000019414) Golden-line barbel MODERN SPECIES 54 ENSSGRG00000029983 arih1 (ENSSGRG00000029910) ENSSGRG00000029906 ppcdc (ENSSGRG00000029905) hacd3 (ENSSGRG00000029894) ints14 (ENSSGRG00000029760) SLC24A1 (ENSSGRG00000029751) #7 dennd4a (ENSSGRG00000028490) #11 rab11a (ENSSGRG00000028469) #12 ENSSGRG00000028343 ##14 map2k1 (ENSSGRG00000026412) #17 rpl4 (ENSSGRG00000026237) #19 zwilch (ENSSGRG00000026228) #20 LCTL (ENSSGRG00000026226) #21 snapc5 (ENSSGRG00000026223) #18 smad6b (ENSSGRG00000026221) #22 smad3b (ENSSGRG00000025385) #23 aagab (ENSSGRG00000025352) #24 iqch (ENSSGRG00000025341) #25 zgc:162898 (ENSSGRG00000025335) skor1b (ENSSGRG00000025333) ENSSGRG00000025332 PIAS1 (ENSSGRG00000025330) morf4l1 (ENSSGRG00000025132) ENSSGRG00000025130 tle3a (ENSSGRG00000022755) kif23 (ENSSGRG00000021128) ddb2 (ENSSGRG00000021066) kbtbd4 (ENSSGRG00000021064) rapsn (ENSSGRG00000021063) agk (ENSSGRG00000021061) Zebrafish MODERN SPECIES 9 ENSDARG00000069168 ppcdc (ENSDARG00000033020) hacd3 (ENSDARG00000016038) ints14 (ENSDARG00000041429) SLC24A1 (ENSDARG00000041431) #7 dennd4a (ENSDARG00000062721) #11 ENSDARG00000092535 ENSDARG00000069189 rab11a (ENSDARG00000041450) #12 ENSDARG00000062686 ##14 map2k1 (ENSDARG00000007825) #17 rpl4 (ENSDARG00000041182) #19 zwilch (ENSDARG00000057100) #20 LCTL (ENSDARG00000016337) #21 snapc5 (ENSDARG00000062476) #18 smad6b (ENSDARG00000031763) #22 smad3b (ENSDARG00000010207) #23 aagab (ENSDARG00000041170) #24 iqch (ENSDARG00000015476) #25 C18H15orf61 (ENSDARG00000111588) skor1b (ENSDARG00000062448) PIAS1 (ENSDARG00000062445) ENSDARG00000069246 morf4l1 (ENSDARG00000041155) ENSDARG00000069250 tle3a (ENSDARG00000002787) kif23 (ENSDARG00000014943) paqr5a (ENSDARG00000041145) ddb2 (ENSDARG00000041140) kbtbd4 (ENSDARG00000069271) rapsn (ENSDARG00000041133) Euteleosteomorpha ANCESTRAL SPECIES 1 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a ENSGT00390000012069 ENSGT00940000165047 ENSGT00940000157760.g.b ENSGT00940000165330 Acanthomorphata ANCESTRAL SPECIES 4 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.l ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 Euacanthomorphacea ANCESTRAL SPECIES 7 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Percomorphaceae ANCESTRAL SPECIES 4 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Tiger tail seahorse MODERN SPECIES 249 cyp11a1.1 (ENSHCOG00000014162) stoml1 (ENSHCOG00000014203) arih1 (ENSHCOG00000014228) ENSHCOG00000014240 ppcdc (ENSHCOG00000014241) hacd3 (ENSHCOG00000014277) ints14 (ENSHCOG00000014315) SLC24A1 (ENSHCOG00000014347) #7 ENSHCOG00000014412 ##11 ENSHCOG00000014452 ##14 map2k1 (ENSHCOG00000014666) #17 rpl4 (ENSHCOG00000014929) #19 zwilch (ENSHCOG00000014943) #20 LCTL (ENSHCOG00000014977) #21 snapc5 (ENSHCOG00000014982) #18 smad6b (ENSHCOG00000015011) #22 smad3b (ENSHCOG00000015055) #23 aagab (ENSHCOG00000015070) #24 zgc:162898 (ENSHCOG00000015085) skor1b (ENSHCOG00000015092) PIAS1 (ENSHCOG00000015129) morf4l1 (ENSHCOG00000000418) TLE3 (ENSHCOG00000015185) kif23 (ENSHCOG00000015297) ddb2 (ENSHCOG00000015319) ENSHCOG00000015337 Percomorphaceae_B ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Percomorphaceae_C ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Eupercaria ANCESTRAL SPECIES 6 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Eupecaria_A ANCESTRAL SPECIES 7 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Ballan wrasse MODERN SPECIES 40 hexa (ENSLBEG00000016294) arih1 (ENSLBEG00000016202) ENSLBEG00000016174 ppcdc (ENSLBEG00000016135) hacd3 (ENSLBEG00000016087) ints14 (ENSLBEG00000016057) SLC24A1 (ENSLBEG00000016038) #7 SLC24A1 (ENSLBEG00000016014) #7 ENSLBEG00000015940 ##11 ENSLBEG00000015733 ##14 map2k1 (ENSLBEG00000015601) #17 rpl4 (ENSLBEG00000015490) #19 zwilch (ENSLBEG00000015453) #20 LCTL (ENSLBEG00000015396) #21 snapc5 (ENSLBEG00000015381) #18 smad6b (ENSLBEG00000015360) #22 smad3b (ENSLBEG00000015322) #23 aagab (ENSLBEG00000015299) #24 iqch (ENSLBEG00000015224) #25 zgc:162898 (ENSLBEG00000015192) skor1b (ENSLBEG00000015181) PIAS1 (ENSLBEG00000015142) morf4l1 (ENSLBEG00000015124) TLE3 (ENSLBEG00000015053) kif23 (ENSLBEG00000014888) ddb2 (ENSLBEG00000014759) ENSLBEG00000014710 kbtbd4 (ENSLBEG00000014698) rapsn (ENSLBEG00000014666) ENSLBEG00000014647 ighmbp2 (ENSLBEG00000014501) Eupecaria_B ANCESTRAL SPECIES 7 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Perciformes ANCESTRAL SPECIES 7 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Perciformes_a ANCESTRAL SPECIES 7 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Channel bull blenny MODERN SPECIES 20 nr2e3 (ENSCGOG00000008164) hexa (ENSCGOG00000008317) arih1 (ENSCGOG00000010759) ENSCGOG00000010801 ppcdc (ENSCGOG00000010802) hacd3 (ENSCGOG00000010806) ints14 (ENSCGOG00000010944) SLC24A1 (ENSCGOG00000010978) #7 ENSCGOG00000011005 ##11 ENSCGOG00000012718 ##14 map2k1 (ENSCGOG00000012783) #17 rpl4 (ENSCGOG00000014628) #19 zwilch (ENSCGOG00000014660) #20 LCTL (ENSCGOG00000014696) #21 snapc5 (ENSCGOG00000014701) #18 smad6b (ENSCGOG00000014702) #22 smad3b (ENSCGOG00000014715) #23 aagab (ENSCGOG00000015616) #24 iqch (ENSCGOG00000015654) #25 zgc:162898 (ENSCGOG00000015744) skor1b (ENSCGOG00000015746) PIAS1 (ENSCGOG00000015764) morf4l1 (ENSCGOG00000016522) TLE3 (ENSCGOG00000017111) kif23 (ENSCGOG00000017942) ddb2 (ENSCGOG00000018311) ENSCGOG00000018313 kbtbd4 (ENSCGOG00000018314) rapsn (ENSCGOG00000018322) ighmbp2 (ENSCGOG00000018334) chid1 (ENSCGOG00000018514) Pike perch MODERN SPECIES 6 nr2e3 (ENSSLUG00000018489) hexa (ENSSLUG00000018512) arih1 (ENSSLUG00000018735) ENSSLUG00000018766 ppcdc (ENSSLUG00000018769) hacd3 (ENSSLUG00000018784) ints14 (ENSSLUG00000018842) SLC24A1 (ENSSLUG00000018879) #7 ENSSLUG00000018947 ##11 ENSSLUG00000019161 ##14 map2k1 (ENSSLUG00000000165) #17 rpl4 (ENSSLUG00000000272) #19 zwilch (ENSSLUG00000000305) #20 LCTL (ENSSLUG00000000329) #21 snapc5 (ENSSLUG00000000334) #18 smad6b (ENSSLUG00000000337) #22 smad3b (ENSSLUG00000000353) #23 aagab (ENSSLUG00000000395) #24 iqch (ENSSLUG00000000409) #25 zgc:162898 (ENSSLUG00000000425) skor1b (ENSSLUG00000000431) PIAS1 (ENSSLUG00000000454) morf4l1 (ENSSLUG00000000519) TLE3 (ENSSLUG00000000698) kif23 (ENSSLUG00000000973) ddb2 (ENSSLUG00000001144) ENSSLUG00000001150 kbtbd4 (ENSSLUG00000001154) rapsn (ENSSLUG00000001159) ENSSLUG00000001166 ighmbp2 (ENSSLUG00000001171) Cottioidei ANCESTRAL SPECIES 6 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a ENSGT00390000012069 Lumpfish MODERN SPECIES 21 hexa (ENSCLMG00005000513) arih1 (ENSCLMG00005000474) ENSCLMG00005000456 ppcdc (ENSCLMG00005000450) hacd3 (ENSCLMG00005000359) ints14 (ENSCLMG00005000331) SLC24A1 (ENSCLMG00005000323) #7 ENSCLMG00005000266 ##11 ENSCLMG00005000242 ##14 map2k1 (ENSCLMG00005000174) #17 RPL4 (ENSCLMG00005019911) #19 rpl4 (ENSCLMG00005019898) #19 zwilch (ENSCLMG00005019897) #20 LCTL (ENSCLMG00005019896) #21 snapc5 (ENSCLMG00005019894) #18 smad6b (ENSCLMG00005019893) #22 smad3b (ENSCLMG00005019769) #23 aagab (ENSCLMG00005019765) #24 iqch (ENSCLMG00005019726) #25 zgc:162898 (ENSCLMG00005019722) skor1b (ENSCLMG00005019721) PIAS1 (ENSCLMG00005019623) morf4l1 (ENSCLMG00005019604) TLE3 (ENSCLMG00005019055) kif23 (ENSCLMG00005018591) ddb2 (ENSCLMG00005018579) kbtbd4 (ENSCLMG00005018576) rapsn (ENSCLMG00005018574) ENSCLMG00005018573 ighmbp2 (ENSCLMG00005018566) chid1 (ENSCLMG00005018557) Stickleback MODERN SPECIES 14 stoml1 (ENSGACG00000004724) nr2e3 (ENSGACG00000004739) hexa (ENSGACG00000004744) arih1 (ENSGACG00000004772) ppcdc (ENSGACG00000004795) hacd3 (ENSGACG00000004806) ints14 (ENSGACG00000004827) SLC24A1 (ENSGACG00000004859) #7 ENSGACG00000004867 ##11 ENSGACG00000004885 ##14 map2k1 (ENSGACG00000004903) #17 rpl4 (ENSGACG00000004968) #19 zwilch (ENSGACG00000005043) #20 LCTL (ENSGACG00000005057) #21 snapc5 (ENSGACG00000005078) #18 smad6b (ENSGACG00000005085) #22 smad3b (ENSGACG00000005092) #23 aagab (ENSGACG00000005119) #24 iqch (ENSGACG00000005158) #25 zgc:162898 (ENSGACG00000005167) skor1b (ENSGACG00000005171) PIAS1 (ENSGACG00000005176) morf4l1 (ENSGACG00000005181) TLE3 (ENSGACG00000005213) kif23 (ENSGACG00000005226) ddb2 (ENSGACG00000005252) kbtbd4 (ENSGACG00000005255) rapsn (ENSGACG00000005265) ighmbp2 (ENSGACG00000005293) chid1 (ENSGACG00000005331) gatd1 (ENSGACG00000005355) Eupecaria_C ANCESTRAL SPECIES 6 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Gilthead seabream MODERN SPECIES 22 hexa (ENSSAUG00010007538) arih1 (ENSSAUG00010009448) ENSSAUG00010009484 ppcdc (ENSSAUG00010009485) hacd3 (ENSSAUG00010009487) ints14 (ENSSAUG00010009496) SLC24A1 (ENSSAUG00010009505) #7 SLC24A1 (ENSSAUG00010009511) #7 ENSSAUG00010009514 ##11 ENSSAUG00010009554 ##14 map2k1 (ENSSAUG00010010913) #17 rpl4 (ENSSAUG00010011110) #19 zwilch (ENSSAUG00010011149) #20 LCTL (ENSSAUG00010011608) #21 snapc5 (ENSSAUG00010011612) #18 smad6b (ENSSAUG00010011616) #22 smad3b (ENSSAUG00010011625) #23 aagab (ENSSAUG00010011683) #24 iqch (ENSSAUG00010011685) #25 zgc:162898 (ENSSAUG00010011688) skor1b (ENSSAUG00010011689) PIAS1 (ENSSAUG00010011693) kif23 (ENSSAUG00010011708) morf4l1 (ENSSAUG00010011733) TLE3 (ENSSAUG00010012732) kif23 (ENSSAUG00010013254) ddb2 (ENSSAUG00010014512) ENSSAUG00010014514 kbtbd4 (ENSSAUG00010014515) rapsn (ENSSAUG00010014517) ighmbp2 (ENSSAUG00010014523) Eupercaria_incertae_sedis ANCESTRAL SPECIES 4 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.f ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Large yellow croaker MODERN SPECIES 492 hexa (ENSLCRG00005010055) arih1 (ENSLCRG00005010040) ENSLCRG00005010032 ppcdc (ENSLCRG00005010030) hacd3 (ENSLCRG00005009991) ints14 (ENSLCRG00005009985) SLC24A1 (ENSLCRG00005009983) #7 SLC24A1 (ENSLCRG00005009980) #7 ENSLCRG00005009722 ##11 ENSLCRG00005009493 ##14 map2k1 (ENSLCRG00005009481) #17 rpl4 (ENSLCRG00005008994) #19 zwilch (ENSLCRG00005008990) #20 LCTL (ENSLCRG00005008987) #21 snapc5 (ENSLCRG00005008983) #18 smad6b (ENSLCRG00005008982) #22 smad3b (ENSLCRG00005008972) #23 aagab (ENSLCRG00005008957) #24 iqch (ENSLCRG00005008950) #25 zgc:162898 (ENSLCRG00005008946) skor1b (ENSLCRG00005008945) ENSLCRG00005008944 PIAS1 (ENSLCRG00005008812) morf4l1 (ENSLCRG00005008690) TLE3 (ENSLCRG00005007697) kif23 (ENSLCRG00005007598) ddb2 (ENSLCRG00005007589) ENSLCRG00005007587 kbtbd4 (ENSLCRG00005007586) rapsn (ENSLCRG00005007583) ENSLCRG00005007582 European seabass MODERN SPECIES 19 hexa (ENSDLAG00005001862) arih1 (ENSDLAG00005026838) ENSDLAG00005033300 ENSDLAG00005004072 ints14 (ENSDLAG00005004123) hacd3 (ENSDLAG00005004092) ENSDLAG00005004229 #7 ENSDLAG00005004243 #7 ENSDLAG00005004333 ##11 ENSDLAG00005004815 ##14 map2k1 (ENSDLAG00005005002) #17 rpl4 (ENSDLAG00005005228) #19 zwilch (ENSDLAG00005005332) #20 LCTL (ENSDLAG00005005497) #21 snapc5 (ENSDLAG00005005541) #18 smad6b (ENSDLAG00005033513) #22 smad3b (ENSDLAG00005005574) #23 aagab (ENSDLAG00005005902) #24 zgc:162898 (ENSDLAG00005031120) skor1b (ENSDLAG00005005972) PIAS1 (ENSDLAG00005006027) ENSDLAG00005006449 morf4l1 (ENSDLAG00005006479) ENSDLAG00005006914 ddb2 (ENSDLAG00005010094) kif23 (ENSDLAG00005007984) ENSDLAG00005010122 kbtbd4 (ENSDLAG00005026445) ENSDLAG00005031626 ighmbp2 (ENSDLAG00005010154) chid1 (ENSDLAG00005010232) Tetraodontidae ANCESTRAL SPECIES 11 ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b.p #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.e.a ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785.c ENSGT00510000048454 ENSGT00940000160974.b.c ENSGT00390000017767.a.b Tetraodon MODERN SPECIES 4 islr2 (ENSTNIG00000008416) stra6 (ENSTNIG00000008417) cyp11a1.1 (ENSTNIG00000008418) stoml1 (ENSTNIG00000008419) arih1 (ENSTNIG00000008420) ppcdc (ENSTNIG00000008421) hacd3 (ENSTNIG00000008422) ints14 (ENSTNIG00000008423) SLC24A1 (ENSTNIG00000008424) #7 ENSTNIG00000008425 ##11 ENSTNIG00000008426 ##14 map2k1 (ENSTNIG00000008427) #17 rpl4 (ENSTNIG00000008428) #19 zwilch (ENSTNIG00000008429) #20 LCTL (ENSTNIG00000008430) #21 smad6b (ENSTNIG00000008431) #22 smad3b (ENSTNIG00000008432) #23 aagab (ENSTNIG00000008433) #24 skor1b (ENSTNIG00000001504) PIAS1 (ENSTNIG00000008434) morf4l1 (ENSTNIG00000008435) TLE3 (ENSTNIG00000008436) kif23 (ENSTNIG00000008437) ENSTNIG00000008438 drd4a (ENSTNIG00000008439) GRAMD4 (ENSTNIG00000008440) ENSTNIG00000000775 CERK (ENSTNIG00000008441) ENSTNIG00000002358 MYO9A (ENSTNIG00000008442) ENSTNIG00000001255 Fugu MODERN SPECIES 21 cyp11a1.1 (ENSTRUG00000013804) stoml1 (ENSTRUG00000019856) arih1 (ENSTRUG00000013998) ENSTRUG00000022549 ppcdc (ENSTRUG00000014075) hacd3 (ENSTRUG00000031290) ints14 (ENSTRUG00000014091) SLC24A1 (ENSTRUG00000014175) #7 ENSTRUG00000014237 ##11 ENSTRUG00000014394 ##14 map2k1 (ENSTRUG00000014529) #17 rpl4 (ENSTRUG00000014667) #19 zwilch (ENSTRUG00000021693) #20 LCTL (ENSTRUG00000014732) #21 snapc5 (ENSTRUG00000020463) #18 smad6b (ENSTRUG00000021541) #22 smad3b (ENSTRUG00000014802) #23 aagab (ENSTRUG00000014949) #24 zgc:162898 (ENSTRUG00000020437) skor1b (ENSTRUG00000014982) morf4l1 (ENSTRUG00000015077) TLE3 (ENSTRUG00000015125) kif23 (ENSTRUG00000015223) ddb2 (ENSTRUG00000015270) ENSTRUG00000023761 kbtbd4 (ENSTRUG00000023881) rapsn (ENSTRUG00000015311) ENSTRUG00000015338 drd4a (ENSTRUG00000015396) ENSTRUG00000025260 GRAMD4 (ENSTRUG00000015437) Percomorphaceae_D ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Anabantaria ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Zig-zag eel MODERN SPECIES 20 hexa (ENSMAMG00000006611) arih1 (ENSMAMG00000006559) ENSMAMG00000006536 ppcdc (ENSMAMG00000006514) hacd3 (ENSMAMG00000006428) ints14 (ENSMAMG00000006472) SLC24A1 (ENSMAMG00000006350) #7 ENSMAMG00000006239 ##11 ENSMAMG00000006178 ##14 map2k1 (ENSMAMG00000006146) #17 rpl4 (ENSMAMG00000006058) #19 zwilch (ENSMAMG00000006031) #20 LCTL (ENSMAMG00000006001) #21 snapc5 (ENSMAMG00000005992) #18 ENSMAMG00000024281 smad6b (ENSMAMG00000005972) #22 smad3b (ENSMAMG00000005952) #23 aagab (ENSMAMG00000005930) #24 iqch (ENSMAMG00000005883) #25 zgc:162898 (ENSMAMG00000005865) skor1b (ENSMAMG00000005854) PIAS1 (ENSMAMG00000005844) ENSMAMG00000024365 morf4l1 (ENSMAMG00000005793) ENSMAMG00000005747 kif23 (ENSMAMG00000005646) ddb2 (ENSMAMG00000005596) ENSMAMG00000024728 kbtbd4 (ENSMAMG00000027596) rapsn (ENSMAMG00000005567) ighmbp2 (ENSMAMG00000005532) Anabantoidei ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Climbing perch MODERN SPECIES 19 nr2e3 (ENSATEG00000009037) hexa (ENSATEG00000009154) arih1 (ENSATEG00000009186) ENSATEG00000009236 ppcdc (ENSATEG00000029359) hacd3 (ENSATEG00000025872) ints14 (ENSATEG00000009319) SLC24A1 (ENSATEG00000009377) #7 ENSATEG00000009439 ##11 ENSATEG00000009531 ##14 map2k1 (ENSATEG00000009613) #17 rpl4 (ENSATEG00000009670) #19 zwilch (ENSATEG00000009702) #20 LCTL (ENSATEG00000009711) #21 snapc5 (ENSATEG00000009776) #18 smad6b (ENSATEG00000009784) #22 smad3b (ENSATEG00000009812) #23 aagab (ENSATEG00000009864) #24 iqch (ENSATEG00000009880) #25 C15orf61 (ENSATEG00000028998) skor1b (ENSATEG00000009950) PIAS1 (ENSATEG00000009975) morf4l1 (ENSATEG00000009987) ENSATEG00000010004 kif23 (ENSATEG00000010066) ddb2 (ENSATEG00000010174) ENSATEG00000010195 kbtbd4 (ENSATEG00000010209) rapsn (ENSATEG00000010221) ENSATEG00000026938 ighmbp2 (ENSATEG00000010246) Siamese fighting fish MODERN SPECIES 17 cyp11a1.1 (ENSBSLG00000013006) hexa (ENSBSLG00000014091) arih1 (ENSBSLG00000014624) ENSBSLG00000014828 ppcdc (ENSBSLG00000014843) hacd3 (ENSBSLG00000014925) ints14 (ENSBSLG00000014980) SLC24A1 (ENSBSLG00000015079) #7 ENSBSLG00000015093 ##11 ENSBSLG00000015132 ##14 map2k1 (ENSBSLG00000015609) #17 rpl4 (ENSBSLG00000016291) #19 zwilch (ENSBSLG00000016330) #20 LCTL (ENSBSLG00000016343) #21 snapc5 (ENSBSLG00000016407) #18 smad6b (ENSBSLG00000016413) #22 smad3b (ENSBSLG00000016420) #23 aagab (ENSBSLG00000016446) #24 iqch (ENSBSLG00000016456) #25 zgc:162898 (ENSBSLG00000016466) skor1b (ENSBSLG00000016468) PIAS1 (ENSBSLG00000016477) morf4l1 (ENSBSLG00000016545) TLE3 (ENSBSLG00000017067) kif23 (ENSBSLG00000018655) ddb2 (ENSBSLG00000019623) ENSBSLG00000019633 kbtbd4 (ENSBSLG00000019638) rapsn (ENSBSLG00000019644) ENSBSLG00000019652 ighmbp2 (ENSBSLG00000019655) Carangaria ANCESTRAL SPECIES 6 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Carangaria_A ANCESTRAL SPECIES ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT00940000181062 ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 Seriola ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT00940000181062 ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Greater amberjack MODERN SPECIES 82 hexa (ENSSDUG00000008531) arih1 (ENSSDUG00000008436) ENSSDUG00000008409 ppcdc (ENSSDUG00000008384) hacd3 (ENSSDUG00000008342) ints14 (ENSSDUG00000008301) SLC24A1 (ENSSDUG00000008280) #7 SLC24A1 (ENSSDUG00000008265) #7 ENSSDUG00000008166 ##11 ENSSDUG00000008123 ##14 map2k1 (ENSSDUG00000008098) #17 RPL4 (ENSSDUG00000008061) #19 zwilch (ENSSDUG00000008041) #20 LCTL (ENSSDUG00000008008) #21 snapc5 (ENSSDUG00000008001) #18 smad6b (ENSSDUG00000007977) #22 smad3b (ENSSDUG00000007957) #23 aagab (ENSSDUG00000007934) #24 iqch (ENSSDUG00000007847) #25 zgc:162898 (ENSSDUG00000007821) skor1b (ENSSDUG00000007810) PIAS1 (ENSSDUG00000007716) morf4l1 (ENSSDUG00000007640) ENSSDUG00000007621 TLE3 (ENSSDUG00000007577) kif23 (ENSSDUG00000007360) ddb2 (ENSSDUG00000007314) kbtbd4 (ENSSDUG00000007244) rapsn (ENSSDUG00000007217) Yellowtail amberjack MODERN SPECIES 3044 hexa (ENSSLDG00000023910) arih1 (ENSSLDG00000023887) ENSSLDG00000023878 ppcdc (ENSSLDG00000023867) hacd3 (ENSSLDG00000023846) ints14 (ENSSLDG00000023818) ENSSLDG00000023813 #7 SLC24A1 (ENSSLDG00000023774) #7 ENSSLDG00000023736 ##11 ENSSLDG00000023706 ##14 map2k1 (ENSSLDG00000023678) #17 rpl4 (ENSSLDG00000023658) #19 zwilch (ENSSLDG00000023641) #20 LCTL (ENSSLDG00000023587) #21 snapc5 (ENSSLDG00000023570) #18 smad6b (ENSSLDG00000023557) #22 smad3b (ENSSLDG00000023534) #23 aagab (ENSSLDG00000023521) #24 iqch (ENSSLDG00000023494) #25 zgc:162898 (ENSSLDG00000023483) skor1b (ENSSLDG00000023468) PIAS1 (ENSSLDG00000023434) morf4l1 (ENSSLDG00000023383) ENSSLDG00000023373 TLE3 (ENSSLDG00000023328) kif23 (ENSSLDG00000023233) ddb2 (ENSSLDG00000023204) kbtbd4 (ENSSLDG00000023182) rapsn (ENSSLDG00000023154) ighmbp2 (ENSSLDG00000023119) chid1 (ENSSLDG00000023101) Barramundi perch MODERN SPECIES 17 hexa (ENSLCAG00010011617) arih1 (ENSLCAG00010011638) ENSLCAG00010011674 ppcdc (ENSLCAG00010011677) hacd3 (ENSLCAG00010011684) ints14 (ENSLCAG00010011694) SLC24A1 (ENSLCAG00010011706) #7 ENSLCAG00010011723 ##11 ENSLCAG00010011752 ENSLCAG00010011758 ##14 map2k1 (ENSLCAG00010011873) #17 rpl4 (ENSLCAG00010012306) #19 zwilch (ENSLCAG00010012324) #20 LCTL (ENSLCAG00010012337) #21 snapc5 (ENSLCAG00010012353) #18 smad6b (ENSLCAG00010012358) #22 smad3b (ENSLCAG00010012407) #23 aagab (ENSLCAG00010012566) #24 iqch (ENSLCAG00010012573) #25 zgc:162898 (ENSLCAG00010012578) skor1b (ENSLCAG00010012584) PIAS1 (ENSLCAG00010012593) morf4l1 (ENSLCAG00010012622) ENSLCAG00010012673 TLE3 (ENSLCAG00010012751) kif23 (ENSLCAG00010013211) ddb2 (ENSLCAG00010013840) ENSLCAG00010013847 kbtbd4 (ENSLCAG00010013848) rapsn (ENSLCAG00010013851) ENSLCAG00010013858 Pleuronectoidei ANCESTRAL SPECIES ENSGT00940000158575 ENSGT01030000234614.C ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Turbot MODERN SPECIES 1 arih1 (ENSSMAG00000015075) ENSSMAG00000015064 ppcdc (ENSSMAG00000015044) hacd3 (ENSSMAG00000015006) ints14 (ENSSMAG00000014965) SLC24A1 (ENSSMAG00000014927) #7 SLC24A1 (ENSSMAG00000014916) #7 ENSSMAG00000014740 ##11 ENSSMAG00000014692 ##14 ENSSMAG00000028102 map2k1 (ENSSMAG00000014654) #17 rpl4 (ENSSMAG00000014547) #19 zwilch (ENSSMAG00000014527) #20 LCTL (ENSSMAG00000014482) #21 snapc5 (ENSSMAG00000014452) #18 smad6b (ENSSMAG00000014437) #22 smad3b (ENSSMAG00000014385) #23 aagab (ENSSMAG00000014364) #24 iqch (ENSSMAG00000014326) #25 zgc:162898 (ENSSMAG00000014311) skor1b (ENSSMAG00000014267) PIAS1 (ENSSMAG00000014246) morf4l1 (ENSSMAG00000014185) ENSSMAG00000013997 kif23 (ENSSMAG00000013831) ddb2 (ENSSMAG00000013800) ENSSMAG00000013793 kbtbd4 (ENSSMAG00000013783) rapsn (ENSSMAG00000013780) ENSSMAG00000013697 ighmbp2 (ENSSMAG00000013687) Tongue sole MODERN SPECIES 16 ENSCSEG00000006602 cyp11a1.1 (ENSCSEG00000006612) stoml1 (ENSCSEG00000006621) ARIH1 (ENSCSEG00000006629) ENSCSEG00000006651 ppcdc (ENSCSEG00000006657) ints14 (ENSCSEG00000006667) SLC24A1 (ENSCSEG00000006709) #7 ENSCSEG00000006736 ##11 ENSCSEG00000006816 ##14 map2k1 (ENSCSEG00000006882) #17 rpl4 (ENSCSEG00000006912) #19 zwilch (ENSCSEG00000006998) #20 LCTL (ENSCSEG00000007031) #21 snapc5 (ENSCSEG00000007049) #18 smad6b (ENSCSEG00000007053) #22 smad3b (ENSCSEG00000007063) #23 TLE3 (ENSCSEG00000007088) morf4l1 (ENSCSEG00000007129) PIAS1 (ENSCSEG00000007150) skor1b (ENSCSEG00000007194) zgc:162898 (ENSCSEG00000007204) iqch (ENSCSEG00000007210) #25 aagab (ENSCSEG00000007229) #24 ENSCSEG00000007234 kif23 (ENSCSEG00000007240) ddb2 (ENSCSEG00000007319) ENSCSEG00000007333 kbtbd4 (ENSCSEG00000007357) rapsn (ENSCSEG00000007367) ENSCSEG00000007385 Ovalentaria ANCESTRAL SPECIES 7 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Atherinomorphae ANCESTRAL SPECIES 5 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Cyprinodontiformes ANCESTRAL SPECIES 6 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Aplocheiloidei ANCESTRAL SPECIES 1 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Turquoise killifish MODERN SPECIES 1622 arih1 (ENSNFUG00015008852) ENSNFUG00015008829 ppcdc (ENSNFUG00015008823) hacd3 (ENSNFUG00015008677) VWA9 (ENSNFUG00015008651) SLC24A1 (ENSNFUG00015008646) #7 DENND4A (ENSNFUG00015008588) ##11 MEGF11 (ENSNFUG00015008461) ##14 MAP2K1 (ENSNFUG00015008325) #17 rpl4 (ENSNFUG00015008298) #19 ZWILCH (ENSNFUG00015008272) #20 LCTL (ENSNFUG00015008241) #21 snapc5 (ENSNFUG00015008236) #18 ENSNFUG00015008234 ENSNFUG00015008231 smad6b (ENSNFUG00015008229) #22 AAGAB (ENSNFUG00015008222) #24 iqch (ENSNFUG00015008218) #25 zgc:162898 (ENSNFUG00015008213) skor1b (ENSNFUG00015008209) PIAS1 (ENSNFUG00015008137) morf4l1 (ENSNFUG00015008050) smad3b (ENSNFUG00015007897) #23 TLE3 (ENSNFUG00015007251) kif23 (ENSNFUG00015006836) ddb2 (ENSNFUG00015006812) ENSNFUG00015006807 KBTBD4 (ENSNFUG00015006805) rapsn (ENSNFUG00015006800) ENSNFUG00015006797 ighmbp2 (ENSNFUG00015006609) Mangrove rivulus MODERN SPECIES 6 hexa (ENSKMAG00000019076) arih1 (ENSKMAG00000019124) ENSKMAG00000019164 ppcdc (ENSKMAG00000019178) hacd3 (ENSKMAG00000019204) ints14 (ENSKMAG00000019255) ENSKMAG00000019281 #7 SLC24A1 (ENSKMAG00000019301) #7 ENSKMAG00000019332 ##11 ENSKMAG00000019409 ##14 map2k1 (ENSKMAG00000019462) #17 rpl4 (ENSKMAG00000019520) #19 zwilch (ENSKMAG00000019558) #20 LCTL (ENSKMAG00000019610) #21 snapc5 (ENSKMAG00000019691) #18 smad6b (ENSKMAG00000019704) #22 smad3b (ENSKMAG00000019721) #23 aagab (ENSKMAG00000019751) #24 iqch (ENSKMAG00000019782) #25 zgc:162898 (ENSKMAG00000019840) skor1b (ENSKMAG00000019852) PIAS1 (ENSKMAG00000019888) morf4l1 (ENSKMAG00000019932) TLE3 (ENSKMAG00000019987) kif23 (ENSKMAG00000020065) ddb2 (ENSKMAG00000020178) ENSKMAG00000020196 kbtbd4 (ENSKMAG00000020215) rapsn (ENSKMAG00000020239) ENSKMAG00000020264 ighmbp2 (ENSKMAG00000020284) Cyprinodontoidei ANCESTRAL SPECIES 7 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Poeciliinae ANCESTRAL SPECIES 3 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Poecilia ANCESTRAL SPECIES 5 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a NAME_6 ANCESTRAL SPECIES 38 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Amazon molly MODERN SPECIES 332 hexa (ENSPFOG00000006640) arih1 (ENSPFOG00000006732) ENSPFOG00000006845 ppcdc (ENSPFOG00000006856) hacd3 (ENSPFOG00000006915) ints14 (ENSPFOG00000006991) ENSPFOG00000023612 #7 SLC24A1 (ENSPFOG00000007134) #7 ENSPFOG00000007336 ##11 ENSPFOG00000007620 ##14 map2k1 (ENSPFOG00000008205) #17 rpl4 (ENSPFOG00000008365) #19 zwilch (ENSPFOG00000008447) #20 LCTL (ENSPFOG00000008595) #21 snapc5 (ENSPFOG00000021667) #18 smad6b (ENSPFOG00000008775) #22 smad3b (ENSPFOG00000008802) #23 aagab (ENSPFOG00000008893) #24 iqch (ENSPFOG00000008947) #25 zgc:162898 (ENSPFOG00000009031) skor1b (ENSPFOG00000009041) PIAS1 (ENSPFOG00000009110) morf4l1 (ENSPFOG00000009311) TLE3 (ENSPFOG00000009535) kif23 (ENSPFOG00000009992) ddb2 (ENSPFOG00000010390) kbtbd4 (ENSPFOG00000010466) rapsn (ENSPFOG00000010493) ENSPFOG00000010570 ighmbp2 (ENSPFOG00000010607) chid1 (ENSPFOG00000010791) Sailfin molly MODERN SPECIES 803 ENSPLAG00000014255 ##14 map2k1 (ENSPLAG00000014191) #17 rpl4 (ENSPLAG00000014151) #19 zwilch (ENSPLAG00000014119) #20 LCTL (ENSPLAG00000014109) #21 snapc5 (ENSPLAG00000014078) #18 smad6b (ENSPLAG00000014074) #22 Guppy MODERN SPECIES 458 nr2e3 (ENSPREG00000009907) hexa (ENSPREG00000009965) arih1 (ENSPREG00000010115) ENSPREG00000010149 ppcdc (ENSPREG00000010163) hacd3 (ENSPREG00000010177) ints14 (ENSPREG00000010197) ENSPREG00000010239 #7 ENSPREG00000010304 ##11 ENSPREG00000010362 ##14 map2k1 (ENSPREG00000010418) #17 rpl4 (ENSPREG00000010449) #19 zwilch (ENSPREG00000010534) #20 LCTL (ENSPREG00000010570) #21 snapc5 (ENSPREG00000010651) #18 smad6b (ENSPREG00000010660) #22 smad3b (ENSPREG00000010683) #23 aagab (ENSPREG00000010705) #24 iqch (ENSPREG00000010718) #25 zgc:162898 (ENSPREG00000010732) skor1b (ENSPREG00000010750) PIAS1 (ENSPREG00000010768) morf4l1 (ENSPREG00000010818) TLE3 (ENSPREG00000010877) kif23 (ENSPREG00000010939) ddb2 (ENSPREG00000011139) ENSPREG00000011171 kbtbd4 (ENSPREG00000011179) rapsn (ENSPREG00000011191) ENSPREG00000011207 ighmbp2 (ENSPREG00000011223) Platyfish MODERN SPECIES 11 hexa (ENSXMAG00000028285) arih1 (ENSXMAG00000015819) ENSXMAG00000022800 ppcdc (ENSXMAG00000015812) hacd3 (ENSXMAG00000015797) ints14 (ENSXMAG00000015780) ENSXMAG00000015778 #7 SLC24A1 (ENSXMAG00000015769) #7 ENSXMAG00000003464 ##11 ENSXMAG00000003498 ##14 map2k1 (ENSXMAG00000003499) #17 rpl4 (ENSXMAG00000029529) #19 zwilch (ENSXMAG00000003532) #20 LCTL (ENSXMAG00000003540) #21 snapc5 (ENSXMAG00000003549) #18 smad6b (ENSXMAG00000003550) #22 smad3b (ENSXMAG00000003553) #23 aagab (ENSXMAG00000003564) #24 iqch (ENSXMAG00000003568) #25 zgc:162898 (ENSXMAG00000022123) skor1b (ENSXMAG00000003579) PIAS1 (ENSXMAG00000003583) morf4l1 (ENSXMAG00000003604) TLE3 (ENSXMAG00000003621) kif23 (ENSXMAG00000003667) ddb2 (ENSXMAG00000003694) ENSXMAG00000023989 kbtbd4 (ENSXMAG00000003696) ENSXMAG00000000599 ENSXMAG00000026603 ighmbp2 (ENSXMAG00000003705) NAME_4 ANCESTRAL SPECIES 114 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Sheepshead minnow MODERN SPECIES 1118 smad6b (ENSCVAG00000007818) #22 smad3b (ENSCVAG00000007804) #23 aagab (ENSCVAG00000007763) #24 ENSCVAG00000007712 zgc:162898 (ENSCVAG00000007700) skor1b (ENSCVAG00000007694) PIAS1 (ENSCVAG00000007674) morf4l1 (ENSCVAG00000007618) Mummichog MODERN SPECIES 282 smad6b (ENSFHEG00000021787) #22 smad3b (ENSFHEG00000021766) #23 aagab (ENSFHEG00000021730) #24 iqch (ENSFHEG00000021713) #25 zgc:162898 (ENSFHEG00000021645) skor1b (ENSFHEG00000021633) ENSFHEG00000021615 morf4l1 (ENSFHEG00000021591) TLE3 (ENSFHEG00000021536) kif23 (ENSFHEG00000021477) ddb2 (ENSFHEG00000021285) ENSFHEG00000021282 kbtbd4 (ENSFHEG00000021264) ENSFHEG00000021254 rapsn (ENSFHEG00000021237) ENSFHEG00000021215 Oryzias ANCESTRAL SPECIES 16 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Oryzias_b ANCESTRAL SPECIES ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Indian medaka MODERN SPECIES 15 snrka (ENSOMEG00000000657) ano10a (ENSOMEG00000020591) cnot10 (ENSOMEG00000020550) ADCY3 (ENSOMEG00000020521) zufsp (ENSOMEG00000020495) WDR26 (ENSOMEG00000020409) ENSOMEG00000020379 ENSOMEG00000020330 ENSOMEG00000020303 rnf19a (ENSOMEG00000020280) pabpc1a (ENSOMEG00000020219) ENSOMEG00000020153 ZNF706 (ENSOMEG00000020130) ENSOMEG00000000761 ncalda (ENSOMEG00000020074) smad6b (ENSOMEG00000020048) #22 smad3b (ENSOMEG00000020016) #23 aagab (ENSOMEG00000019971) #24 iqch (ENSOMEG00000019948) #25 zgc:162898 (ENSOMEG00000019899) skor1b (ENSOMEG00000019886) PIAS1 (ENSOMEG00000019860) morf4l1 (ENSOMEG00000019799) TLE3 (ENSOMEG00000019731) kif23 (ENSOMEG00000019673) ddb2 (ENSOMEG00000019402) ENSOMEG00000019359 kbtbd4 (ENSOMEG00000019350) rapsn (ENSOMEG00000019340) ENSOMEG00000019319 ighmbp2 (ENSOMEG00000019296) Javanese ricefish MODERN SPECIES 20 cyp11a1.1 (ENSOJAG00000017367) nr2e3 (ENSOJAG00000017186) hexa (ENSOJAG00000015950) arih1 (ENSOJAG00000015474) ENSOJAG00000015447 ppcdc (ENSOJAG00000015440) hacd3 (ENSOJAG00000015219) ints14 (ENSOJAG00000014921) ENSOJAG00000014816 #7 SLC24A1 (ENSOJAG00000014806) #7 ENSOJAG00000014599 ##11 ENSOJAG00000013786 ##14 map2k1 (ENSOJAG00000013527) #17 rpl4 (ENSOJAG00000013399) #19 zwilch (ENSOJAG00000013246) #20 smad6b (ENSOJAG00000013057) #22 smad3b (ENSOJAG00000012829) #23 aagab (ENSOJAG00000012590) #24 iqch (ENSOJAG00000012524) #25 zgc:162898 (ENSOJAG00000012513) skor1b (ENSOJAG00000012503) PIAS1 (ENSOJAG00000012338) morf4l1 (ENSOJAG00000012268) TLE3 (ENSOJAG00000011183) kif23 (ENSOJAG00000008816) ddb2 (ENSOJAG00000008503) ENSOJAG00000008474 kbtbd4 (ENSOJAG00000008453) rapsn (ENSOJAG00000008442) ENSOJAG00000008433 ighmbp2 (ENSOJAG00000008377) Oryzias_a ANCESTRAL SPECIES 1 ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT01030000234532.B.e.b.f.d #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT01060000249026 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a ENSGT00390000012069 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 766 cracr2b (ENSOSIG00000010620) cd151 (ENSOSIG00000010618) gatd1 (ENSOSIG00000010617) chid1 (ENSOSIG00000010614) ENSOSIG00000010607 rapsn (ENSOSIG00000010602) kbtbd4 (ENSOSIG00000010600) ENSOSIG00000010597 ddb2 (ENSOSIG00000010596) kif23 (ENSOSIG00000006428) TLE3 (ENSOSIG00000001248) morf4l1 (ENSOSIG00000001015) PIAS1 (ENSOSIG00000000776) skor1b (ENSOSIG00000000726) zgc:162898 (ENSOSIG00000000720) smad6b (ENSOSIG00000022510) #22 smad6b (ENSOSIG00000022504) #22 snapc5 (ENSOSIG00000022501) #18 LCTL (ENSOSIG00000022490) #21 zwilch (ENSOSIG00000022469) #20 rpl4 (ENSOSIG00000022390) #19 map2k1 (ENSOSIG00000022353) #17 ENSOSIG00000022181 ##14 ENSOSIG00000022109 ##11 SLC24A1 (ENSOSIG00000022079) #7 ENSOSIG00000022075 #7 ints14 (ENSOSIG00000022003) hacd3 (ENSOSIG00000021945) ppcdc (ENSOSIG00000021935) ENSOSIG00000021931 arih1 (ENSOSIG00000021861) Chinese medaka MODERN SPECIES 766 hexa (ENSOSIG00000021507) arih1 (ENSOSIG00000021861) ENSOSIG00000021931 ppcdc (ENSOSIG00000021935) hacd3 (ENSOSIG00000021945) ints14 (ENSOSIG00000022003) ENSOSIG00000022075 #7 SLC24A1 (ENSOSIG00000022079) #7 ENSOSIG00000022109 ##11 ENSOSIG00000022181 ##14 map2k1 (ENSOSIG00000022353) #17 rpl4 (ENSOSIG00000022390) #19 zwilch (ENSOSIG00000022469) #20 LCTL (ENSOSIG00000022490) #21 snapc5 (ENSOSIG00000022501) #18 smad6b (ENSOSIG00000022504) #22 smad6b (ENSOSIG00000022510) #22 zgc:162898 (ENSOSIG00000000720) skor1b (ENSOSIG00000000726) PIAS1 (ENSOSIG00000000776) morf4l1 (ENSOSIG00000001015) TLE3 (ENSOSIG00000001248) kif23 (ENSOSIG00000006428) ddb2 (ENSOSIG00000010596) ENSOSIG00000010597 kbtbd4 (ENSOSIG00000010600) rapsn (ENSOSIG00000010602) ENSOSIG00000010607 chid1 (ENSOSIG00000010614) gatd1 (ENSOSIG00000010617) cd151 (ENSOSIG00000010618) Japanese Medaka HdrR MODERN SPECIES 20 arih1 (ENSORLG00000007132) ENSORLG00000007094 ppcdc (ENSORLG00000007090) hacd3 (ENSORLG00000007078) ints14 (ENSORLG00000007056) ENSORLG00000028299 #7 ENSORLG00000026631 SLC24A1 (ENSORLG00000007029) #7 ENSORLG00000007022 ##11 ENSORLG00000006997 ##14 map2k1 (ENSORLG00000006926) #17 rpl4 (ENSORLG00000006882) #19 zwilch (ENSORLG00000006863) #20 LCTL (ENSORLG00000006840) #21 ENSORLG00000025403 smad6b (ENSORLG00000006825) #22 smad3b (ENSORLG00000006803) #23 aagab (ENSORLG00000006754) #24 zgc:162898 (ENSORLG00000006741) skor1b (ENSORLG00000006736) PIAS1 (ENSORLG00000006728) morf4l1 (ENSORLG00000025632) TLE3 (ENSORLG00000006700) kif23 (ENSORLG00000006689) ddb2 (ENSORLG00000006657) ENSORLG00000029307 kbtbd4 (ENSORLG00000006648) rapsn (ENSORLG00000006635) ENSORLG00000006610 ighmbp2 (ENSORLG00000006561) chid1 (ENSORLG00000006537) Ovalentaria_B ANCESTRAL SPECIES 3 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Pomacentridae ANCESTRAL SPECIES 1 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Pomacentridae_A ANCESTRAL SPECIES 9 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Amphiprion ANCESTRAL SPECIES 4 ENSGT00940000156926.c.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Clown anemonefish MODERN SPECIES 1348 pparaa (ENSAOCG00000021870) ENSAOCG00000021901 atxn10 (ENSAOCG00000021916) ENSAOCG00000021997 ENSAOCG00000022029 AKR1D1 (ENSAOCG00000022037) KDM5A (ENSAOCG00000022150) ENSAOCG00000022343 USP15 (ENSAOCG00000022427) ENSAOCG00000022525 ##14 map2k1 (ENSAOCG00000022590) #17 rpl4 (ENSAOCG00000022562) #19 zwilch (ENSAOCG00000003631) #20 LCTL (ENSAOCG00000003648) #21 snapc5 (ENSAOCG00000003658) #18 smad6b (ENSAOCG00000003669) #22 smad3b (ENSAOCG00000000100) #23 aagab (ENSAOCG00000003690) #24 iqch (ENSAOCG00000003725) #25 zgc:162898 (ENSAOCG00000003743) skor1b (ENSAOCG00000003749) PIAS1 (ENSAOCG00000003771) morf4l1 (ENSAOCG00000003793) ENSAOCG00000003805 TLE3 (ENSAOCG00000003819) kif23 (ENSAOCG00000003882) Orange clownfish MODERN SPECIES 18 hexa (ENSAPEG00000020294) arih1 (ENSAPEG00000020341) ENSAPEG00000020412 ppcdc (ENSAPEG00000020454) hacd3 (ENSAPEG00000020472) ints14 (ENSAPEG00000020521) SLC24A1 (ENSAPEG00000020557) #7 SLC24A1 (ENSAPEG00000020576) #7 ENSAPEG00000020590 ##11 ENSAPEG00000020674 ##14 map2k1 (ENSAPEG00000020723) #17 rpl4 (ENSAPEG00000020765) #19 zwilch (ENSAPEG00000020879) #20 LCTL (ENSAPEG00000021009) #21 snapc5 (ENSAPEG00000021082) #18 smad6b (ENSAPEG00000021097) #22 smad3b (ENSAPEG00000021121) #23 aagab (ENSAPEG00000021154) #24 iqch (ENSAPEG00000021177) #25 zgc:162898 (ENSAPEG00000021209) skor1b (ENSAPEG00000021226) PIAS1 (ENSAPEG00000021254) morf4l1 (ENSAPEG00000021329) TLE3 (ENSAPEG00000021401) kif23 (ENSAPEG00000021465) ddb2 (ENSAPEG00000021600) ENSAPEG00000021620 kbtbd4 (ENSAPEG00000021632) rapsn (ENSAPEG00000021656) ENSAPEG00000021685 ENSAPEG00000021695 Spiny chromis MODERN SPECIES 6 hexa (ENSAPOG00000007374) arih1 (ENSAPOG00000007442) ENSAPOG00000007458 ppcdc (ENSAPOG00000007489) hacd3 (ENSAPOG00000007552) ints14 (ENSAPOG00000007621) SLC24A1 (ENSAPOG00000007942) #7 SLC24A1 (ENSAPOG00000008141) #7 ENSAPOG00000008269 ##11 ENSAPOG00000008421 ##14 map2k1 (ENSAPOG00000008515) #17 rpl4 (ENSAPOG00000008471) #19 zwilch (ENSAPOG00000008541) #20 LCTL (ENSAPOG00000008616) #21 snapc5 (ENSAPOG00000008638) #18 smad6b (ENSAPOG00000008675) #22 smad3b (ENSAPOG00000008731) #23 aagab (ENSAPOG00000008748) #24 iqch (ENSAPOG00000008805) #25 zgc:162898 (ENSAPOG00000008823) skor1b (ENSAPOG00000008831) PIAS1 (ENSAPOG00000008862) morf4l1 (ENSAPOG00000008936) TLE3 (ENSAPOG00000009026) kif23 (ENSAPOG00000009173) ddb2 (ENSAPOG00000009264) kbtbd4 (ENSAPOG00000009282) rapsn (ENSAPOG00000009316) ENSAPOG00000009326 ighmbp2 (ENSAPOG00000009399) chid1 (ENSAPOG00000009458) Bicolor damselfish MODERN SPECIES 317 hexa (ENSSPAG00000018566) arih1 (ENSSPAG00000018619) ENSSPAG00000018683 ppcdc (ENSSPAG00000018714) hacd3 (ENSSPAG00000018731) ints14 (ENSSPAG00000018803) SLC24A1 (ENSSPAG00000018853) #7 SLC24A1 (ENSSPAG00000018871) #7 ENSSPAG00000018896 ##11 ENSSPAG00000018936 ##14 map2k1 (ENSSPAG00000018984) #17 rpl4 (ENSSPAG00000019006) #19 zwilch (ENSSPAG00000019063) #20 LCTL (ENSSPAG00000019086) #21 snapc5 (ENSSPAG00000019113) #18 smad6b (ENSSPAG00000019122) #22 smad3b (ENSSPAG00000019142) #23 aagab (ENSSPAG00000019178) #24 iqch (ENSSPAG00000019195) #25 zgc:162898 (ENSSPAG00000019226) skor1b (ENSSPAG00000019235) Cichlidae ANCESTRAL SPECIES 5 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a Midas cichlid MODERN SPECIES 385 nr2e3 (ENSACIG00000003032) hexa (ENSACIG00000003137) arih1 (ENSACIG00000003347) ENSACIG00000003474 ppcdc (ENSACIG00000003479) hacd3 (ENSACIG00000003504) ints14 (ENSACIG00000003523) SLC24A1 (ENSACIG00000003557) #7 ENSACIG00000003590 ##11 ENSACIG00000003648 ##14 map2k1 (ENSACIG00000003699) #17 rpl4 (ENSACIG00000003731) #19 zwilch (ENSACIG00000003822) #20 LCTL (ENSACIG00000003960) #21 snapc5 (ENSACIG00000004004) #18 smad6b (ENSACIG00000004032) #22 smad3b (ENSACIG00000004048) #23 aagab (ENSACIG00000004078) #24 iqch (ENSACIG00000004210) #25 zgc:162898 (ENSACIG00000004275) skor1b (ENSACIG00000004288) PIAS1 (ENSACIG00000004315) morf4l1 (ENSACIG00000004474) TLE3 (ENSACIG00000004505) kif23 (ENSACIG00000004552) ddb2 (ENSACIG00000004603) kbtbd4 (ENSACIG00000004631) rapsn (ENSACIG00000004645) ENSACIG00000004657 ENSACIG00000004665 ighmbp2 (ENSACIG00000004670) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.d ENSGT00940000155837.o.c ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.d ENSGT00940000155837.o.c ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454.l Haplochromini ANCESTRAL SPECIES ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.a #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.d ENSGT00940000155837.o.c ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454.l Haplochromini_A ANCESTRAL SPECIES 1 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.a #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.d ENSGT00940000155837.o.c ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454.l Haplochromini_B ANCESTRAL SPECIES 28 ENSGT00940000156926.c ENSGT00390000008107.c.b ENSGT00940000155744 ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f.c #7 ENSGT00940000155836.A ##11 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b #22 ENSGT00940000153499.b.b.d.a.b.a #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT01030000234539.a.a.b.a.b.a.b ENSGT00950000182965.a.b.a.a ENSGT01030000234519.e.b.k.b ENSGT00940000155837.o.d ENSGT00940000155837.o.c ENSGT00510000047881 ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454.k.b Eastern happy MODERN SPECIES 19 nr2e3 (ENSACLG00000016858) hexa (ENSACLG00000016825) arih1 (ENSACLG00000016725) ENSACLG00000016653 ppcdc (ENSACLG00000016456) hacd3 (ENSACLG00000016337) ints14 (ENSACLG00000016244) SLC24A1 (ENSACLG00000016209) #7 ENSACLG00000015789 ##11 ENSACLG00000015528 ##14 map2k1 (ENSACLG00000015490) #17 rpl4 (ENSACLG00000015376) #19 zwilch (ENSACLG00000015306) #20 LCTL (ENSACLG00000015185) #21 snapc5 (ENSACLG00000015178) #18 smad6b (ENSACLG00000015060) #22 smad3b (ENSACLG00000015005) #23 aagab (ENSACLG00000014966) #24 iqch (ENSACLG00000014950) #25 zgc:162898 (ENSACLG00000014936) skor1b (ENSACLG00000014916) PIAS1 (ENSACLG00000014895) morf4l1 (ENSACLG00000014807) TLE3 (ENSACLG00000014741) kif23 (ENSACLG00000014717) kif23 (ENSACLG00000014311) ENSACLG00000014281 ddb2 (ENSACLG00000014238) kbtbd4 (ENSACLG00000014220) rapsn (ENSACLG00000014172) ENSACLG00000014161 Zebra mbuna MODERN SPECIES 1110 nr2e3 (ENSMZEG00005022568) hexa (ENSMZEG00005022579) arih1 (ENSMZEG00005022582) ENSMZEG00005022585 ppcdc (ENSMZEG00005022599) hacd3 (ENSMZEG00005022607) ints14 (ENSMZEG00005022613) SLC24A1 (ENSMZEG00005022618) #7 ENSMZEG00005022627 ##11 ENSMZEG00005022640 ##14 map2k1 (ENSMZEG00005022643) #17 rpl4 (ENSMZEG00005022644) #19 zwilch (ENSMZEG00005022662) #20 LCTL (ENSMZEG00005022665) #21 snapc5 (ENSMZEG00005022673) #18 smad6b (ENSMZEG00005022680) #22 smad3b (ENSMZEG00005022682) #23 aagab (ENSMZEG00005022686) #24 iqch (ENSMZEG00005022693) #25 zgc:162898 (ENSMZEG00005022698) skor1b (ENSMZEG00005022702) PIAS1 (ENSMZEG00005022706) morf4l1 (ENSMZEG00005000059) TLE3 (ENSMZEG00005000148) kif23 (ENSMZEG00005000318) ddb2 (ENSMZEG00005000480) ENSMZEG00005000486 kbtbd4 (ENSMZEG00005000506) rapsn (ENSMZEG00005000597) ENSMZEG00005000614 ENSMZEG00005000628 P. nyererei MODERN SPECIES 330 nr2e3 (ENSPNYG00000013295) hexa (ENSPNYG00000013367) arih1 (ENSPNYG00000013404) ENSPNYG00000013487 hacd3 (ENSPNYG00000013539) ints14 (ENSPNYG00000013587) SLC24A1 (ENSPNYG00000013638) #7 ENSPNYG00000013709 ##11 ENSPNYG00000013766 ##14 ENSPNYG00000013866 map2k1 (ENSPNYG00000014012) #17 rpl4 (ENSPNYG00000014038) #19 zwilch (ENSPNYG00000014254) #20 LCTL (ENSPNYG00000014382) #21 snapc5 (ENSPNYG00000014419) #18 smad6b (ENSPNYG00000014464) #22 smad3b (ENSPNYG00000014483) #23 aagab (ENSPNYG00000014514) #24 iqch (ENSPNYG00000014565) #25 zgc:162898 (ENSPNYG00000014663) skor1b (ENSPNYG00000014672) PIAS1 (ENSPNYG00000014701) morf4l1 (ENSPNYG00000014764) TLE3 (ENSPNYG00000014824) kif23 (ENSPNYG00000014871) ddb2 (ENSPNYG00000014944) ENSPNYG00000014956 kbtbd4 (ENSPNYG00000014971) rapsn (ENSPNYG00000014981) ENSPNYG00000014991 ighmbp2 (ENSPNYG00000015003) Burton s mouthbrooder MODERN SPECIES 368 hexa (ENSHBUG00000013611) arih1 (ENSHBUG00000013587) ENSHBUG00000013489 ppcdc (ENSHBUG00000013452) hacd3 (ENSHBUG00000013444) ints14 (ENSHBUG00000013409) SLC24A1 (ENSHBUG00000013345) #7 ENSHBUG00000013307 ##11 ENSHBUG00000013075 ##14 ENSHBUG00000012853 map2k1 (ENSHBUG00000012769) #17 rpl4 (ENSHBUG00000012721) #19 zwilch (ENSHBUG00000012704) #20 LCTL (ENSHBUG00000012695) #21 snapc5 (ENSHBUG00000012617) #18 smad6b (ENSHBUG00000012608) #22 ENSHBUG00000012576 #23 Lyretail cichlid MODERN SPECIES 305 hexa (ENSNBRG00000016965) arih1 (ENSNBRG00000016929) ENSNBRG00000016913 ppcdc (ENSNBRG00000016756) hacd3 (ENSNBRG00000016668) ints14 (ENSNBRG00000016618) SLC24A1 (ENSNBRG00000016597) #7 ENSNBRG00000016316 ##11 ENSNBRG00000016229 ENSNBRG00000016155 ##14 map2k1 (ENSNBRG00000016125) #17 rpl4 (ENSNBRG00000015986) #19 zwilch (ENSNBRG00000015874) #20 LCTL (ENSNBRG00000015831) #21 snapc5 (ENSNBRG00000015818) #18 smad6b (ENSNBRG00000015802) #22 smad3b (ENSNBRG00000015781) #23 aagab (ENSNBRG00000015745) #24 iqch (ENSNBRG00000015611) #25 zgc:162898 (ENSNBRG00000015586) skor1b (ENSNBRG00000015564) PIAS1 (ENSNBRG00000015347) morf4l1 (ENSNBRG00000015273) TLE3 (ENSNBRG00000015223) kif23 (ENSNBRG00000015135) ddb2 (ENSNBRG00000015103) ENSNBRG00000015089 kbtbd4 (ENSNBRG00000014991) rapsn (ENSNBRG00000014965) ENSNBRG00000014952 ENSNBRG00000014940 Nile tilapia MODERN SPECIES 19 arih1 (ENSONIG00000015404) ENSONIG00000038771 ppcdc (ENSONIG00000015408) hacd3 (ENSONIG00000015409) ints14 (ENSONIG00000015414) ENSONIG00000042969 #7 SLC24A1 (ENSONIG00000015416) #7 ENSONIG00000015421 ##11 ENSONIG00000015428 ##14 ENSONIG00000034322 map2k1 (ENSONIG00000041722) #17 rpl4 (ENSONIG00000015438) #19 zwilch (ENSONIG00000015453) #20 LCTL (ENSONIG00000015457) #21 snapc5 (ENSONIG00000015460) #18 smad6 (ENSONIG00000027979) #22 smad3b (ENSONIG00000015464) #23 aagab (ENSONIG00000039374) #24 iqch (ENSONIG00000015469) #25 zgc:162898 (ENSONIG00000015471) skor1b (ENSONIG00000041762) PIAS1 (ENSONIG00000015473) morf4l1 (ENSONIG00000015475) TLE3 (ENSONIG00000015480) ENSONIG00000039253 kif23 (ENSONIG00000040865) kif23 (ENSONIG00000015489) ddb2 (ENSONIG00000015496) kbtbd4 (ENSONIG00000015498) rapsn (ENSONIG00000015500) ighmbp2 (ENSONIG00000015506) Pinecone sodierfish MODERN SPECIES 20 nr2e3 (ENSMMDG00005010313) hexa (ENSMMDG00005010279) arih1 (ENSMMDG00005010264) ENSMMDG00005010261 ppcdc (ENSMMDG00005010260) hacd3 (ENSMMDG00005010257) ints14 (ENSMMDG00005010242) SLC24A1 (ENSMMDG00005010216) #7 ENSMMDG00005010200 ##11 ENSMMDG00005010191 ##14 map2k1 (ENSMMDG00005010104) #17 rpl4 (ENSMMDG00005009927) #19 zwilch (ENSMMDG00005009915) #20 LCTL (ENSMMDG00005009714) #21 snapc5 (ENSMMDG00005009708) #18 smad6b (ENSMMDG00005009705) #22 smad3b (ENSMMDG00005009590) #23 aagab (ENSMMDG00005009566) #24 iqch (ENSMMDG00005009565) #25 zgc:162898 (ENSMMDG00005009564) skor1b (ENSMMDG00005009562) PIAS1 (ENSMMDG00005009535) morf4l1 (ENSMMDG00005009517) TLE3 (ENSMMDG00005007447) kif23 (ENSMMDG00005004943) ddb2 (ENSMMDG00005004863) ENSMMDG00005004856 kbtbd4 (ENSMMDG00005004850) rapsn (ENSMMDG00005004846) ighmbp2 (ENSMMDG00005004807) chid1 (ENSMMDG00005004213) Cod MODERN SPECIES 22 arih1 (ENSGMOG00000008347) ENSGMOG00000036344 ppcdc (ENSGMOG00000008350) hacd3 (ENSGMOG00000008351) ints14 (ENSGMOG00000008352) SLC24A1 (ENSGMOG00000024598) #7 ENSGMOG00000008354 ##11 ENSGMOG00000036396 ENSGMOG00000008355 #12 ENSGMOG00000008356 ##14 map2k1 (ENSGMOG00000008358) #17 rpl4 (ENSGMOG00000008359) #19 zwilch (ENSGMOG00000008360) #20 LCTL (ENSGMOG00000008361) #21 snapc5 (ENSGMOG00000036981) #18 smad6b (ENSGMOG00000008363) #22 smad3b (ENSGMOG00000029371) #23 aagab (ENSGMOG00000008365) #24 zgc:162898 (ENSGMOG00000008367) skor1b (ENSGMOG00000033826) PIAS1 (ENSGMOG00000008372) morf4l1 (ENSGMOG00000008374) kif23 (ENSGMOG00000017492) ddb2 (ENSGMOG00000017517) kbtbd4 (ENSGMOG00000017530) rapsn (ENSGMOG00000017544) ighmbp2 (ENSGMOG00000017553) chid1 (ENSGMOG00000017597) gatd1 (ENSGMOG00000017617) cd151 (ENSGMOG00000017632) cracr2b (ENSGMOG00000017652) Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000158146.b.i #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000158146.b.i #22 Huchen MODERN SPECIES 7093 smad6b (ENSHHUG00000011812) #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000158146.b.i #22 Salmo ANCESTRAL SPECIES ENSGT00940000158146.b.i #22 River trout MODERN SPECIES 171 SMAD6 (ENSSTUG00000037036) #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000158146.b.i #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000158146.b.i #22 Chinook salmon MODERN SPECIES 1083 SMAD6 (ENSOTSG00005015899) #22 Protacanthopterygii ANCESTRAL SPECIES 10 ENSGT00390000008107.c.b ENSGT00940000155744.t.b ENSGT00940000169185 ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT01030000234532.B.e.b.f #7 ENSGT00940000155836.A ##11 ENSGT00940000154914.wb #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b.j #22 ENSGT00940000153499.b.b.d.a.b #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00390000015942 ENSGT00940000158440.g.b ENSGT00510000047881 ENSGT00940000155837.o ENSGT00990000203778 ENSGT00940000158775 ENSGT00390000016785 ENSGT00510000048454 ENSGT00930000151035.a ENSGT00390000012069 ENSGT00940000165047 ENSGT00940000157760.g.b Salmoninae ANCESTRAL SPECIES 271 ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT00940000155836.A ##11 ENSGT00940000154914.wb #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331 #18 ENSGT00940000158146.b.j #22 ENSGT00940000153499.b.b.d.a.b.g #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b Salmoninae_a ANCESTRAL SPECIES 9 ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT00940000155836.A ##11 ENSGT00940000154914.wb.b #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145.q #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331.k.a #18 ENSGT00940000158146.b.j #22 ENSGT00940000153499.b.b.d.a.b.g #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b ENSGT01030000234519.e.a.a.a.b.f.f ENSGT00510000047881 ENSGT00510000048454 ENSGT00940000157760.g.b ENSGT00440000033504.A ENSGT00390000018587.f.c ENSGT00390000018587.f.d ENSGT00390000010089 ENSGT00530000063626.a.g ENSGT00940000160990.f Oncorhynchus ANCESTRAL SPECIES 90 ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107.n ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT00940000155836.A ##11 ENSGT00940000154914.wb.b #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145.q #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331.k.a #18 ENSGT00940000158146.b.j #22 ENSGT00940000153499.b.b.d.a.b.g #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b ENSGT01030000234519.e.a.a.a.b.f.f ENSGT00510000047881 Oncorhynchus_a ANCESTRAL SPECIES 115 ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107.n ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT00940000155836.A ##11 ENSGT00940000154914.wb.b #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145.q #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00390000010331.k.a #18 ENSGT00390000010331.l #18 ENSGT00940000158146.b.j #22 Chinook salmon MODERN SPECIES 1864 smad6b (ENSOTSG00005022084) #22 Coho salmon MODERN SPECIES 1 ints14 (ENSOKIG00005018507) ENSOKIG00005018559 ENSOKIG00005018622 ##11 rab11a (ENSOKIG00005018981) #12 ENSOKIG00005019075 ##14 ENSOKIG00005019846 ENSOKIG00005019852 ENSOKIG00005019867 ENSOKIG00005019877 ENSOKIG00005019888 map2k1 (ENSOKIG00005019896) #17 rpl4 (ENSOKIG00005019951) #19 zwilch (ENSOKIG00005020066) #20 LCTL (ENSOKIG00005020135) #21 snapc5 (ENSOKIG00005020275) #18 smad6b (ENSOKIG00005020286) #22 ENSOKIG00005020296 ENSOKIG00005020309 CD151 (ENSOKIG00005020322) ENSOKIG00005020382 ddb2 (ENSOKIG00005020530) ENSOKIG00005020544 ENSOKIG00005020649 ENSOKIG00005024128 ENSOKIG00005024437 ENSOKIG00005024451 ENSOKIG00005024463 ENSOKIG00005024473 aagab (ENSOKIG00005024492) #24 SMAD3 (ENSOKIG00005024533) #23 ENSOKIG00005024593 Rainbow trout MODERN SPECIES 22 ENSOMYG00000067561 ENSOMYG00000057849 ENSOMYG00000050176 stoml1 (ENSOMYG00000015767) ENSOMYG00000058050 ppcdc (ENSOMYG00000023939) ENSOMYG00000048541 ints14 (ENSOMYG00000015775) ENSOMYG00000051025 ##11 rab11a (ENSOMYG00000028574) #12 map2k1 (ENSOMYG00000070762) #17 rpl4 (ENSOMYG00000015672) #19 zwilch (ENSOMYG00000064330) #20 LCTL (ENSOMYG00000051376) #21 snapc5 (ENSOMYG00000026529) #18 smad6b (ENSOMYG00000035050) #22 ENSOMYG00000074334 ENSOMYG00000055253 smad3b (ENSOMYG00000040088) #23 ENSOMYG00000023824 #24 iqch (ENSOMYG00000073930) #25 skor1b (ENSOMYG00000015835) ENSOMYG00000071075 ENSOMYG00000054822 ENSOMYG00000064085 ENSOMYG00000049187 ENSOMYG00000052268 ENSOMYG00000076334 ENSOMYG00000037240 ENSOMYG00000057438 ENSOMYG00000015898 Salmo ANCESTRAL SPECIES 91 ENSGT00940000153246.a.a.a.c ENSGT00390000017366 ENSGT01030000234614.C ENSGT00940000155744.t.b ENSGT00440000038107 ENSGT00530000062962.b.a.f ENSGT00390000009486 ENSGT00940000155836.A ##11 ENSGT00940000154914.wb.b #12 ENSGT00940000155333.A.b ##14 ENSGT00940000153487.b.b #17 ENSGT00390000018145.q #19 ENSGT00390000013696 #20 ENSGT00940000157369.a #21 ENSGT00940000180676 ENSGT00940000158146.b.j #22 ENSGT00940000153499.b.b.d.a.b.g #23 ENSGT00390000007218 #24 ENSGT00390000008908 #25 ENSGT00940000158440.g.b.g.b ENSGT01030000234539.a.a.b.a.b.a.b.c.b ENSGT01030000234519.e.a.a.a.b.f.f ENSGT00510000047881 ENSGT00510000048454 ENSGT00940000157760.g.b ENSGT00440000033504.A ENSGT00390000018587.f.c ENSGT00390000010089 ENSGT00530000063626.a.g ENSGT00940000160990.f ENSGT00940000164030.j Atlantic salmon MODERN SPECIES 15 stoml1 (ENSSSAG00000009303) ENSSSAG00000098010 ppcdc (ENSSSAG00000010656) hacd3 (ENSSSAG00000009344) ints14 (ENSSSAG00000106122) ENSSSAG00000009435 ##11 rab11a (ENSSSAG00000083201) #12 ENSSSAG00000086055 ##14 map2k1 (ENSSSAG00000073424) #17 rpl4 (ENSSSAG00000008596) #19 zwilch (ENSSSAG00000008578) #20 LCTL (ENSSSAG00000073442) #21 snapc5 (ENSSSAG00000102443) #18 ENSSSAG00000073427 ENSSSAG00000117817 smad6 (ENSSSAG00000073418) #22 smad3b (ENSSSAG00000115090) #23 aagab (ENSSSAG00000082892) #24 iqch (ENSSSAG00000073414) #25 skor1b (ENSSSAG00000073404) ENSSSAG00000073337 ENSSSAG00000073314 ENSSSAG00000113149 ENSSSAG00000120598 ENSSSAG00000114635 ENSSSAG00000115130 ENSSSAG00000112218 ENSSSAG00000099032 ENSSSAG00000091330 ENSSSAG00000105869 ENSSSAG00000073286 River trout MODERN SPECIES 33 arih1l (ENSSTUG00000015055) ppcdc (ENSSTUG00000015044) ENSSTUG00000015031 ENSSTUG00000015027 hacd3 (ENSSTUG00000014954) ints14 (ENSSTUG00000014861) ENSSTUG00000014342 ##11 RAB11B (ENSSTUG00000014285) ENSSTUG00000014230 ##14 map2k1 (ENSSTUG00000014171) #17 rpl4 (ENSSTUG00000014130) #19 zwilch (ENSSTUG00000014067) #20 LCTL (ENSSTUG00000013900) #21 ENSSTUG00000013877 ENSSTUG00000013846 smad6b (ENSSTUG00000013843) #22 smad3b (ENSSTUG00000013733) #23 aagab (ENSSTUG00000013689) #24 iqch (ENSSTUG00000013633) #25 ENSSTUG00000009581 ddb2 (ENSSTUG00000009449) ENSSTUG00000009248 ENSSTUG00000009190 ENSSTUG00000009180 ENSSTUG00000009161 ENSSTUG00000009155 ENSSTUG00000009141 ENSSTUG00000009072 ENSSTUG00000009031 ENSSTUG00000009017 ENSSTUG00000008959 Northern pike MODERN SPECIES 18 SLC24A1 (ENSELUG00000003062) #7 ENSELUG00000003043 ##11 rab11a (ENSELUG00000025088) #12 ENSELUG00000002960 ##14 ENSELUG00000030296 map2k1 (ENSELUG00000002907) #17 ENSELUG00000002918 rpl4 (ENSELUG00000002885) #19 zwilch (ENSELUG00000002833) #20 ENSELUG00000029781 ENSELUG00000025180 LCTL (ENSELUG00000002819) #21 ENSELUG00000029160 ENSELUG00000032451 ENSELUG00000002781 smad6b (ENSELUG00000024569) #22 ENSELUG00000030325 ENSELUG00000024546 ENSELUG00000024494 ENSELUG00000024486 ENSELUG00000024480 ENSELUG00000024434 morf4l1 (ENSELUG00000024423) PIAS1 (ENSELUG00000024418) skor1b (ENSELUG00000024340) zgc:162898 (ENSELUG00000025422) iqch (ENSELUG00000024287) #25 aagab (ENSELUG00000024235) #24 smad3b (ENSELUG00000024171) #23 ENSELUG00000034022 PNPLA2 (ENSELUG00000024038) Osteoglossiformes ANCESTRAL SPECIES 37 ENSGT00550000074781 ENSGT00390000012336 ENSGT00940000155164.a.b ENSGT00530000063335.A.sb ENSGT00530000063675.a.n ENSGT01040000240503.A.a.a.e ENSGT00390000018400.a ENSGT00940000154914 #12 ENSGT00940000155333.A ##14 ENSGT00530000063106.B #15 ENSGT00390000005764 #16 ENSGT00940000153487.b.b #17 ENSGT00390000018145 #19 ENSGT00940000157369 #21 ENSGT00940000165890 ENSGT00940000158146 #22 ENSGT00940000153499.b.b.d #23 ENSGT00390000007218 #24 ENSGT00390000015942 ENSGT00940000157505 ENSGT00940000158440 ENSGT01030000234539.a.a.b.a.b ENSGT00950000182965.a.a ENSGT00940000157475 ENSGT01030000234519.e.b ENSGT00940000155837 ENSGT00940000158844 ENSGT00390000006043 ENSGT00940000162591 ENSGT00950000182907.a.b.b.b.a ENSGT00940000158689 Asian bonytongue MODERN SPECIES 2 lctla (ENSSFOG00015008481) #21 crybgx (ENSSFOG00015008536) smad6a (ENSSFOG00015029740) #22 smad3b (ENSSFOG00015008603) #23 aagab (ENSSFOG00015008638) #24 zgc:162898 (ENSSFOG00015008646) map2k5 (ENSSFOG00015008680) ENSSFOG00015028767 skor1a (ENSSFOG00015008718) PIAS1 (ENSSFOG00015008750) ENSSFOG00015027278 morf4l1 (ENSSFOG00015008833) UACA (ENSSFOG00015008887) tle3a (ENSSFOG00015008917) kif23 (ENSSFOG00015009021) paqr5a (ENSSFOG00015009123) glceb (ENSSFOG00015009150) NOX5 (ENSSFOG00015009192) P. kingsleyae MODERN SPECIES 146 ENTREP2 (ENSPKIG00000014858) GOLM2 (ENSPKIG00000014876) CTDSPL2 (ENSPKIG00000014916) ENSPKIG00000014991 EIF3J (ENSPKIG00000015047) RAB11A (ENSPKIG00000015102) #12 ENSPKIG00000015215 ##14 ENSPKIG00000015455 dis3l (ENSPKIG00000015490) #15 ENSPKIG00000015547 tipin (ENSPKIG00000015565) #16 map2k1 (ENSPKIG00000015608) #17 rpl4 (ENSPKIG00000015644) #19 lctla (ENSPKIG00000015716) #21 smad6a (ENSPKIG00000015767) #22 smad3b (ENSPKIG00000015799) #23 aagab (ENSPKIG00000015838) #24 zgc:162898 (ENSPKIG00000015892) map2k5 (ENSPKIG00000015970) ENSPKIG00000016124 skor1a (ENSPKIG00000016152) PIAS1 (ENSPKIG00000016189) morf4l1 (ENSPKIG00000016253) UACA (ENSPKIG00000016315) tle3a (ENSPKIG00000016380) ENSPKIG00000016421 kif23 (ENSPKIG00000016508) paqr5a (ENSPKIG00000016740) glceb (ENSPKIG00000016806) NOX5 (ENSPKIG00000016853) Spotted gar MODERN SPECIES 669 IGDCC4 (ENSLOCG00000013791) hacd3 (ENSLOCG00000013803) ints14 (ENSLOCG00000013812) SLC24A1 (ENSLOCG00000013820) #7 dennd4a (ENSLOCG00000013827) #11 rab11a (ENSLOCG00000013835) #12 ENSLOCG00000013837 #14 dis3l (ENSLOCG00000013846) #15 tipin (ENSLOCG00000013854) #16 map2k1 (ENSLOCG00000013858) #17 rpl4 (ENSLOCG00000013867) #19 zwilch (ENSLOCG00000013873) #20 lctla (ENSLOCG00000013878) #21 crybgx (ENSLOCG00000013888) snapc5 (ENSLOCG00000013891) #18 smad6a (ENSLOCG00000013892) #22 smad3b (ENSLOCG00000013897) #23 aagab (ENSLOCG00000013907) #24 iqch (ENSLOCG00000013914) #25 zgc:162898 (ENSLOCG00000013920) map2k5 (ENSLOCG00000013923) skor1a (ENSLOCG00000013929) PIAS1 (ENSLOCG00000013933) calml4a (ENSLOCG00000013940) CLN6 (ENSLOCG00000013946) ENSLOCG00000013948 itga11a (ENSLOCG00000013952) CORO2B (ENSLOCG00000013967) anp32a (ENSLOCG00000013972) NOX5 (ENSLOCG00000013975) glcea (ENSLOCG00000013983) Reedfish DUPLICATION Reedfish MODERN SPECIES 10 ctr9 (ENSECRG00000004946) adar (ENSECRG00000004784) CHRNB2 (ENSECRG00000004714) ENSECRG00000004688 SHE (ENSECRG00000004674) krtcap2 (ENSECRG00000004656) dpm3 (ENSECRG00000004651) slc50a1 (ENSECRG00000004642) efna1b (ENSECRG00000004626) efna3b (ENSECRG00000004604) ENSECRG00000004588 polr3c (ENSECRG00000004557) rnf115a (ENSECRG00000004537) ENSECRG00000004505 ENSECRG00000004273 ENSECRG00000004214 #22 ENSECRG00000004205 ENSECRG00000004193 plekho1b (ENSECRG00000004184) ENSECRG00000004178 ENSECRG00000004173 acap2b (ENSECRG00000004117) psmd1 (ENSECRG00000004089) ENSECRG00000004066 ENSECRG00000004050 ENSECRG00000004032 eif2b5 (ENSECRG00000004015) ENSECRG00000003999 ENSECRG00000009347 ENSECRG00000009340 thap4 (ENSECRG00000009331) Reedfish MODERN SPECIES 8 hacd3 (ENSECRG00000022248) ints14 (ENSECRG00000016954) SLC24A1 (ENSECRG00000016985) #7 dennd4a (ENSECRG00000017079) #11 ENSECRG00000017309 ENSECRG00000017340 ENSECRG00000017450 #14 dis3l (ENSECRG00000017497) #15 tipin (ENSECRG00000017552) #16 map2k1 (ENSECRG00000017617) #17 rpl4 (ENSECRG00000017761) #19 zwilch (ENSECRG00000017849) #20 lctla (ENSECRG00000017984) #21 crybgx (ENSECRG00000018775) snapc5 (ENSECRG00000018817) #18 smad6a (ENSECRG00000018835) #22 smad3b (ENSECRG00000018886) #23 aagab (ENSECRG00000019047) #24 iqch (ENSECRG00000019116) #25 zgc:162898 (ENSECRG00000019374) map2k5 (ENSECRG00000019409) ENSECRG00000019494 ENSECRG00000019525 PIAS1 (ENSECRG00000019551) calml4a (ENSECRG00000019589) hmg20a (ENSECRG00000019610) PEAK1 (ENSECRG00000019637) ENSECRG00000019664 ppib (ENSECRG00000019696) PCLAF (ENSECRG00000019739) csnk1g1 (ENSECRG00000019804)