Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a.d #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #24	ENSGT00560000078638 #25	ENSGT00390000004226	ENSGT00390000002886.b.b	ENSGT00940000162359	ENSGT01020000231229	ENSGT00940000164798	ENSGT00940000162721	ENSGT00940000158052.a #26	ENSGT00940000157047	ENSGT00530000063698.a.b	ENSGT00940000158264.a	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019
Equus	ANCESTRAL SPECIES	36	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313.i #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a.d #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #24	ENSGT00560000078638 #25	ENSGT00940000158052.a #26	ENSGT00940000155638 #27	ENSGT00950000182917.b #29	ENSGT00390000000444 #30	ENSGT00940000155295 #31	ENSGT01090000263359 #32	ENSGT00390000017571 #33	ENSGT00940000162118 #34	ENSGT00940000159287 #35	ENSGT00950000182922.a.a.a.b.a.b.a.b.b #36	ENSGT00940000156352	ENSGT00940000160354 #37	ENSGT00390000011620.a.a.a
Donkey	MODERN SPECIES	27	ENSEASG00005026491 #7	ENSEASG00005029646 #8	ENSEASG00005034896 #9	ENSEASG00005026337 #10	ENSEASG00005025616 #11	ENSEASG00005026849 #12	ENSEASG00005024394 #13	ENSEASG00005002722 #14	ENSEASG00005002730 #15	SMCHD1 (ENSEASG00005002865) #16	EMILIN2 (ENSEASG00005003573) #17	ENSEASG00005003579 #18	MYOM1 (ENSEASG00005003603) #19	MYL12A (ENSEASG00005023571) #20	MYL12B (ENSEASG00005029990) #21	TGIF1 (ENSEASG00005026544) #22	ENSEASG00005024534 #23	DLGAP1 (ENSEASG00005003653) #24	AKAIN1 (ENSEASG00005038786) #25	ENSEASG00005004330 #26	ENSEASG00005004417 #27	ENSEASG00005004519 #28	ENSEASG00005029371 #29	ENSEASG00005004560 #30	ENSEASG00005004612 #31	ENSEASG00005005115 #32	IMPACT (ENSEASG00005005120) #33	HRH4 (ENSEASG00005029823) #34	ZNF521 (ENSEASG00005005129) #35	ENSEASG00005005135 #36	PSMA8 (ENSEASG00005005145) #37
Horse	MODERN SPECIES	29	COLEC12 (ENSECAG00000018963)	CETN1 (ENSECAG00000058680)	CLUL1 (ENSECAG00000022352)	TYMS (ENSECAG00000023203)	ENOSF1 (ENSECAG00000012547)	YES1 (ENSECAG00000021666)	ADCYAP1 (ENSECAG00000033061)	METTL4 (ENSECAG00000006301) #14	NDC80 (ENSECAG00000008827) #15	SMCHD1 (ENSECAG00000014144) #16	EMILIN2 (ENSECAG00000057052) #17	LPIN2 (ENSECAG00000006280) #18	MYOM1 (ENSECAG00000013468) #19	MYL12A (ENSECAG00000051472) #20	MYL12B (ENSECAG00000038682) #21	TGIF1 (ENSECAG00000011078) #22	DLGAP1 (ENSECAG00000013739) #24	AKAIN1 (ENSECAG00000033364) #25	ZBTB14 (ENSECAG00000019218) #26	LAMA3 (ENSECAG00000021277) #27	ENSECAG00000054828	ENSECAG00000043961	TTC39C (ENSECAG00000010545) #29	CABYR (ENSECAG00000014148) #30	OSBPL1A (ENSECAG00000015182) #31	ENSECAG00000056623 #32	IMPACT (ENSECAG00000020098) #33	HRH4 (ENSECAG00000006494) #34	ZNF521 (ENSECAG00000006546) #35	ENSECAG00000004392 #36	ENSECAG00000049495
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a.d #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #24	ENSGT00560000078638 #25	ENSGT00390000004226	ENSGT00390000002886.b.b	ENSGT00940000162359	ENSGT01020000231229	ENSGT00940000164798	ENSGT00940000162721	ENSGT00940000158052.a #26	ENSGT00940000157047	ENSGT00530000063698.a.b	ENSGT00940000158264.a	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019
Megabat	MODERN SPECIES	554											EMILIN2 (ENSPVAG00000007219) #17	LPIN2 (ENSPVAG00000007221) #18	MYOM1 (ENSPVAG00000007223) #19	MYL12A (ENSPVAG00000007226) #20	MYL12B (ENSPVAG00000007227) #21	TGIF1 (ENSPVAG00000007228) #22
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.d ##21	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #24	ENSGT00560000078638 #25	ENSGT00940000162359	ENSGT01020000231229	ENSGT00940000164798	ENSGT00940000162721	ENSGT00940000158052.a #26	ENSGT00940000157047	ENSGT00530000063698.a.b	ENSGT00940000158264.a	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325
Microbat	MODERN SPECIES	995								METTL4 (ENSMLUG00000003351) #14	NDC80 (ENSMLUG00000003354) #15	SMCHD1 (ENSMLUG00000003378) #16	EMILIN2 (ENSMLUG00000003397) #17	LPIN2 (ENSMLUG00000003403) #18	ENSMLUG00000029548	MYOM1 (ENSMLUG00000003417) #19	MYL12B (ENSMLUG00000005189) #21	TGIF1 (ENSMLUG00000025199) #22	DLGAP1 (ENSMLUG00000012142) #24	ENSMLUG00000030528	ZBTB14 (ENSMLUG00000016123) #26	EPB41L3 (ENSMLUG00000016125)	L3MBTL4 (ENSMLUG00000002011)	ENSMLUG00000023508	ARHGAP28 (ENSMLUG00000005314)	LAMA1 (ENSMLUG00000004002)	LRRC30 (ENSMLUG00000004630)	PTPRM (ENSMLUG00000016507)	RAB12 (ENSMLUG00000002883)	MTCL1 (ENSMLUG00000002889)	ENSMLUG00000013891	NDUFV2 (ENSMLUG00000013503)	ANKRD12 (ENSMLUG00000008632)
Greater horseshoe bat	MODERN SPECIES	10	TYMS (ENSRFEG00010017484)	YES1 (ENSRFEG00010017283)	ADCYAP1 (ENSRFEG00010017231)	ENSRFEG00010017213	ENSRFEG00010017153	ENSRFEG00010017105	ENSRFEG00010017086	METTL4 (ENSRFEG00010017011) #14	NDC80 (ENSRFEG00010016810) #15	SMCHD1 (ENSRFEG00010016132) #16	EMILIN2 (ENSRFEG00010016098) #17	LPIN2 (ENSRFEG00010016004) #18	MYOM1 (ENSRFEG00010014872) #19	ENSRFEG00010014795 ##21	MYL12B (ENSRFEG00010014767) #21	TGIF1 (ENSRFEG00010014659) #22	DLGAP1 (ENSRFEG00010014146) #24	AKAIN1 (ENSRFEG00010014046) #25	ENSRFEG00010014022	ZBTB14 (ENSRFEG00010013973) #26	EPB41L3 (ENSRFEG00010012327)	ENSRFEG00010012203	TMEM200C (ENSRFEG00010012187)	L3MBTL4 (ENSRFEG00010011944)	ENSRFEG00010011861	ARHGAP28 (ENSRFEG00010011354)	LAMA1 (ENSRFEG00010011271)	LRRC30 (ENSRFEG00010011243)	PTPRM (ENSRFEG00010010873)	RAB12 (ENSRFEG00010010724)	ENSRFEG00010010493