Euarchontoglires	ANCESTRAL SPECIES	22	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580
Euarchontoglires_A	ANCESTRAL SPECIES	22	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580
Glires	ANCESTRAL SPECIES	23	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580
Rodentia	ANCESTRAL SPECIES	23	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580
Rodentia_A	ANCESTRAL SPECIES	23	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a
Sciuridae	ANCESTRAL SPECIES	31	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786.gb	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325.n	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a
Marmotini	ANCESTRAL SPECIES	31	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786.gb	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000162721 #25	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325.n	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a
Marmotini_b	ANCESTRAL SPECIES	195							ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00390000002886.b.b	ENSGT00940000162359	ENSGT00940000164798	ENSGT00940000162721 #25	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29
Arctic ground squirrel	MODERN SPECIES	139								METTL4 (ENSUPAG00010005108) #14	NDC80 (ENSUPAG00010005138) #15	SMCHD1 (ENSUPAG00010005174) #16	EMILIN2 (ENSUPAG00010005299) #17	LPIN2 (ENSUPAG00010005308) #18	MYOM1 (ENSUPAG00010005334) #19	ENSUPAG00010005444 #20	MYL12B (ENSUPAG00010005460) #21	TGIF1 (ENSUPAG00010005473) #22	DLGAP1 (ENSUPAG00010005500) #23	AKAIN1 (ENSUPAG00010006283) #24	ENSUPAG00010006290 #25	ZBTB14 (ENSUPAG00010006293) #26	EPB41L3 (ENSUPAG00010006308) #27	TMEM200C (ENSUPAG00010006662) #28	L3MBTL4 (ENSUPAG00010006670) #29
Squirrel	MODERN SPECIES	272						ADCYAP1 (ENSSTOG00000011453)	ENSSTOG00000024466	METTL4 (ENSSTOG00000004283) #14	NDC80 (ENSSTOG00000013062) #15	SMCHD1 (ENSSTOG00000022898) #16	EMILIN2 (ENSSTOG00000026733) #17	LPIN2 (ENSSTOG00000005772) #18	MYOM1 (ENSSTOG00000005796) #19	MYL12A (ENSSTOG00000027658) #20	MYL12B (ENSSTOG00000019788) #21	TGIF1 (ENSSTOG00000027485) #22	DLGAP1 (ENSSTOG00000001728) #23
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	20	ENSMMMG00000002799	KCNQ5 (ENSMMMG00000002823)	ENSMMMG00000002902	DPPA5 (ENSMMMG00000002922)	ENSMMMG00000002931	ENSMMMG00000002946	ENSMMMG00000002966	ENSMMMG00000002973	ENSMMMG00000002997	CGAS (ENSMMMG00000003022)	MTO1 (ENSMMMG00000003047)	ENSMMMG00000003132	ENSMMMG00000003421	SLC17A5 (ENSMMMG00000003439)	CD109 (ENSMMMG00000003475)	ENSMMMG00000003553 #22
Alpin marmot	MODERN SPECIES	10	ENSMMMG00000010580	CETN1 (ENSMMMG00000010586)	CLUL1 (ENSMMMG00000010598)	TYMS (ENSMMMG00000010633)	ENOSF1 (ENSMMMG00000010652)	YES1 (ENSMMMG00000010661)	ADCYAP1 (ENSMMMG00000010782)	METTL4 (ENSMMMG00000010797) #14	NDC80 (ENSMMMG00000010813) #15	SMCHD1 (ENSMMMG00000010857) #16	EMILIN2 (ENSMMMG00000011901) #17	LPIN2 (ENSMMMG00000011908) #18	MYOM1 (ENSMMMG00000011990) #19	MYL12A (ENSMMMG00000012076) #20	MYL12B (ENSMMMG00000012089) #21	TGIF1 (ENSMMMG00000012104) #22	DLGAP1 (ENSMMMG00000012118) #23	AKAIN1 (ENSMMMG00000012852) #24	ENSMMMG00000012857 #25	ZBTB14 (ENSMMMG00000012859) #26	EPB41L3 (ENSMMMG00000012882) #27	L3MBTL4 (ENSMMMG00000013328) #29	ARHGAP28 (ENSMMMG00000013408)	LAMA1 (ENSMMMG00000013463)	LRRC30 (ENSMMMG00000013552)	PTPRM (ENSMMMG00000013579)	ENSMMMG00000013697	ENSMMMG00000013713	ENSMMMG00000013760	ENSMMMG00000013764	MTCL1 (ENSMMMG00000013768)
Eurasian red squirrel	MODERN SPECIES	4	CLUL1 (ENSSVLG00005022648)	ENSSVLG00005022566	ENOSF1 (ENSSVLG00005022213)	ENSSVLG00005022001	ADCYAP1 (ENSSVLG00005021960)	ENSSVLG00005021938	ENSSVLG00005021834 #14	NDC80 (ENSSVLG00005021715) #15	ENSSVLG00005021684	SMCHD1 (ENSSVLG00005021629) #16	EMILIN2 (ENSSVLG00005021595) #17	LPIN2 (ENSSVLG00005021537) #18	MYOM1 (ENSSVLG00005020656) #19	MYL12A (ENSSVLG00005020518) #20	MYL12B (ENSSVLG00005020487) #21	TGIF1 (ENSSVLG00005020396) #22	DLGAP1 (ENSSVLG00005019856) #23	ENSSVLG00005019491	AKAIN1 (ENSSVLG00005019389) #24	ENSSVLG00005019313 #25	ZBTB14 (ENSSVLG00005019264) #26	EPB41L3 (ENSSVLG00005018950) #27	TMEM200C (ENSSVLG00005018871) #28	L3MBTL4 (ENSSVLG00005018713) #29	ARHGAP28 (ENSSVLG00005018157)	ENSSVLG00005018044	LRRC30 (ENSSVLG00005018021)	ENSSVLG00005017979	PTPRM (ENSSVLG00005017846)	ENSSVLG00005017768	ENSSVLG00005017727
Hystricomorpha	ANCESTRAL SPECIES	32	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.o.a.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	9	ADCYAP1 (ENSHGLG00000034296)	ENSHGLG00000046692	ENSHGLG00000041049	ENSHGLG00000035395	ENSHGLG00000038851	ENSHGLG00000004061	ENSHGLG00000004250 #14	ENSHGLG00000033709	ENSHGLG00000006458 #15	SMCHD1 (ENSHGLG00000003560) #16	ENSHGLG00000044239 #17	LPIN2 (ENSHGLG00000007840) #18	MYOM1 (ENSHGLG00000014511) #19	MYL12A (ENSHGLG00000040455) #20	MYL12B (ENSHGLG00000034781) #21	TGIF1 (ENSHGLG00000018765) #22	ENSHGLG00000036933 #23	ENSHGLG00000006158	ENSHGLG00000042452	ENSHGLG00000006262	ENSHGLG00000042885	ENSHGLG00000007011 #24	ENSHGLG00000046379 #26	EPB41L3 (ENSHGLG00000010311) #27	ENSHGLG00000034855 #28	ENSHGLG00000020714	ARHGAP28 (ENSHGLG00000006823)	LAMA1 (ENSHGLG00000009921)	ENSHGLG00000042487	LRRC30 (ENSHGLG00000020514)	PTPRM (ENSHGLG00000008461)
Naked mole-rat female	MODERN SPECIES	7	IL6ST (ENSHGLG00000002605)	ENSHGLG00000017887	ANKRD55 (ENSHGLG00000002248)	ENSHGLG00000019923	ENSHGLG00000037743	ENSHGLG00000002155	MAP3K1 (ENSHGLG00000008852)	ENSHGLG00000016353	SETD9 (ENSHGLG00000007843)	MIER3 (ENSHGLG00000007522)	ENSHGLG00000049674	ENSHGLG00000047590	GPBP1 (ENSHGLG00000006461)	ENSHGLG00000048618	ACTBL2 (ENSHGLG00000020239)	ENSHGLG00000005073 #22	PLK2 (ENSHGLG00000004619)	GAPT (ENSHGLG00000035104)	RAB3C (ENSHGLG00000004380)	ENSHGLG00000046236	ENSHGLG00000049862	ENSHGLG00000043409	ENSHGLG00000034016	PDE4D (ENSHGLG00000007099)	DEPDC1B (ENSHGLG00000019523)	ELOVL7 (ENSHGLG00000041515)	ENSHGLG00000019517	NDUFAF2 (ENSHGLG00000049827)	ENSHGLG00000019502	ZSWIM6 (ENSHGLG00000003187)	ENSHGLG00000002012
Hystricomorpha_a	ANCESTRAL SPECIES	26	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.o.a.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058
Hystricomorpha_b	ANCESTRAL SPECIES	21	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.o.a.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000154639
Long-tailed chinchilla	MODERN SPECIES	109	CLUL1 (ENSCLAG00000011935)	TYMS (ENSCLAG00000011426)	ENOSF1 (ENSCLAG00000008600)	YES1 (ENSCLAG00000007748)	ADCYAP1 (ENSCLAG00000007209)	ENSCLAG00000007052	ENSCLAG00000011958	METTL4 (ENSCLAG00000011739) #14	NDC80 (ENSCLAG00000011120) #15	SMCHD1 (ENSCLAG00000008351) #16	EMILIN2 (ENSCLAG00000007221) #17	LPIN2 (ENSCLAG00000016431) #18	MYOM1 (ENSCLAG00000009876) #19	MYL12A (ENSCLAG00000011666) #20	MYL12B (ENSCLAG00000008854) #21	TGIF1 (ENSCLAG00000008448) #22	DLGAP1 (ENSCLAG00000007165) #23	AKAIN1 (ENSCLAG00000012253) #24	ZBTB14 (ENSCLAG00000015733) #26	EPB41L3 (ENSCLAG00000009191) #27	ARHGAP28 (ENSCLAG00000009327)	LAMA1 (ENSCLAG00000016313)	LRRC30 (ENSCLAG00000017849)	PTPRM (ENSCLAG00000012021)	ENSCLAG00000011714	RAB12 (ENSCLAG00000008683)	MTCL1 (ENSCLAG00000010836)	NDUFV2 (ENSCLAG00000008537)	ANKRD12 (ENSCLAG00000007955)	TWSG1 (ENSCLAG00000010627)	RALBP1 (ENSCLAG00000008823)
Degu	MODERN SPECIES	116	ENOSF1 (ENSODEG00000005113)	YES1 (ENSODEG00000005726)	ADCYAP1 (ENSODEG00000007089)	ENSODEG00000007303	ENSODEG00000019310	METTL4 (ENSODEG00000006068) #14	NDC80 (ENSODEG00000006479) #15	ENSODEG00000006655	SMCHD1 (ENSODEG00000006113) #16	EMILIN2 (ENSODEG00000007278) #17	LPIN2 (ENSODEG00000005432) #18	ENSODEG00000006584	MYOM1 (ENSODEG00000006774) #19	MYL12A (ENSODEG00000006110) #20	ENSODEG00000005356 #21	TGIF1 (ENSODEG00000005910) #22	DLGAP1 (ENSODEG00000006056) #23	ENSODEG00000008032	AKAIN1 (ENSODEG00000007027) #24	ZBTB14 (ENSODEG00000007228) #26	EPB41L3 (ENSODEG00000007473) #27	ARHGAP28 (ENSODEG00000005750)	ENSODEG00000005712	LAMA1 (ENSODEG00000006017)	ENSODEG00000019415	ENSODEG00000007064	RAB12 (ENSODEG00000006414)	MTCL1 (ENSODEG00000006449)
Guinea pig	MODERN SPECIES	82									METTL4 (ENSCPOG00000005833) #14	NDC80 (ENSCPOG00000005838) #15	SMCHD1 (ENSCPOG00000001596) #16	EMILIN2 (ENSCPOG00000037480) #17	LPIN2 (ENSCPOG00000023844) #18	MYOM1 (ENSCPOG00000012792) #19	MYL12A (ENSCPOG00000037183) #20	ENSCPOG00000040606 #22	DLGAP1 (ENSCPOG00000006550) #23	ENSCPOG00000039039 #24	ZBTB14 (ENSCPOG00000025607) #26	EPB41L3 (ENSCPOG00000004412) #27	TMEM200C (ENSCPOG00000038683) #28	ARHGAP28 (ENSCPOG00000013280)	LAMA1 (ENSCPOG00000013286)	ENSCPOG00000006937	PTPRM (ENSCPOG00000038437)	ENSCPOG00000025094	RAB12 (ENSCPOG00000022689)	MTCL1 (ENSCPOG00000013933)	NDUFV2 (ENSCPOG00000037853)	ANKRD12 (ENSCPOG00000032722)	TWSG1 (ENSCPOG00000025437)
Rodentia_B	ANCESTRAL SPECIES	27	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580
Myomorpha	ANCESTRAL SPECIES	45	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A
Muroidea	ANCESTRAL SPECIES	46	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B
Muroidea_A	ANCESTRAL SPECIES	19			ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B
Cricetidae	ANCESTRAL SPECIES	19			ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B
Cricetinae	ANCESTRAL SPECIES	3			ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B	ENSGT00390000016717
Golden Hamster	MODERN SPECIES	747						ENSMAUG00000008517	ENSMAUG00000017822	Mettl4 (ENSMAUG00000004504) #14	Ndc80 (ENSMAUG00000005822) #15	ENSMAUG00000009467	Smchd1 (ENSMAUG00000020732) #16	Emilin2 (ENSMAUG00000008934) #17	Lpin2 (ENSMAUG00000009579) #18	Myom1 (ENSMAUG00000012755) #19	Myl12a (ENSMAUG00000018600) #20	ENSMAUG00000018223 #22	Dlgap1 (ENSMAUG00000019471) #23	Akain1 (ENSMAUG00000020687) #24	Zbtb14 (ENSMAUG00000014139) #26	Epb41l3 (ENSMAUG00000011827) #27	ENSMAUG00000019846	Tmem200c (ENSMAUG00000014507) #28	L3mbtl4 (ENSMAUG00000001573) #29	Arhgap28 (ENSMAUG00000016331)	Lama1 (ENSMAUG00000000452)	Lrrc30 (ENSMAUG00000002146)	ENSMAUG00000013283	ENSMAUG00000001486	Themis3 (ENSMAUG00000011734)	Rab12 (ENSMAUG00000008371)	Mtcl1 (ENSMAUG00000014436)
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001007268	Yes1 (ENSCGRG00001012390)	Adcyap1 (ENSCGRG00001007071)	ENSCGRG00001010839	ENSCGRG00001012413	ENSCGRG00001010099	Mettl4 (ENSCGRG00001005723) #14	ENSCGRG00001009792	Ndc80 (ENSCGRG00001011888) #15	Smchd1 (ENSCGRG00001011971) #16	Emilin2 (ENSCGRG00001005288) #17	Lpin2 (ENSCGRG00001012322) #18	Myom1 (ENSCGRG00001012204) #19	Myl12a (ENSCGRG00001011344) #20	Myl12b (ENSCGRG00001011388) #21	Tgif1 (ENSCGRG00001007018) #22	Dlgap1 (ENSCGRG00001010521) #23	Akain1 (ENSCGRG00001011277) #24	Zbtb14 (ENSCGRG00001011456) #26	Epb41l3 (ENSCGRG00001007547) #27	Tmem200c (ENSCGRG00001010878) #28	L3mbtl4 (ENSCGRG00001011431) #29	Arhgap28 (ENSCGRG00001005575)	Lama1 (ENSCGRG00001011536)	Lrrc30 (ENSCGRG00001010374)	Ptprm (ENSCGRG00001011796)	Themis3 (ENSCGRG00001011260)	Rab12 (ENSCGRG00001006958)	Mtcl1 (ENSCGRG00001004149)	ENSCGRG00001010133	Ddx11 (ENSCGRG00001004560)
Cricetidae_B	ANCESTRAL SPECIES	62			ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A
Northern American deer mouse	DUPLICATION
Northern American deer mouse	MODERN SPECIES	4	ENSPEMG00000029175	Tyms (ENSPEMG00000022684)	ENSPEMG00000023960	ENSPEMG00000030907	Adcyap1 (ENSPEMG00000026939)	ENSPEMG00000021079	ENSPEMG00000021564	ENSPEMG00000012275 #14	Ndc80 (ENSPEMG00000011873) #15	Smchd1 (ENSPEMG00000010741) #16	Emilin2 (ENSPEMG00000000648) #17	Lpin2 (ENSPEMG00000016819) #18	Myom1 (ENSPEMG00000010271) #19	Myl12a (ENSPEMG00000021243) #20	Myl12b (ENSPEMG00000022144) #21	ENSPEMG00000026379 #22	ENSPEMG00000031236	Dlgap1 (ENSPEMG00000020719) #23	ENSPEMG00000027160	ENSPEMG00000025947	Akain1 (ENSPEMG00000024985) #24	Zbtb14 (ENSPEMG00000016649) #26	Epb41l3 (ENSPEMG00000009758) #27	Tmem200c (ENSPEMG00000026206) #28	L3mbtl4 (ENSPEMG00000001103) #29	Arhgap28 (ENSPEMG00000020350)	Lama1 (ENSPEMG00000021586)	Lrrc30 (ENSPEMG00000003079)	Ptprm (ENSPEMG00000024155)	Themis3 (ENSPEMG00000021070)	Rab12 (ENSPEMG00000021032)
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000029012	ENSPEMG00000005907	Or9q1 (ENSPEMG00000030928)	Or9i14 (ENSPEMG00000028210)	ENSPEMG00000027169	Or9q2 (ENSPEMG00000028521)	Or1s2 (ENSPEMG00000029030)	Or10q12 (ENSPEMG00000026052)	Or10q1 (ENSPEMG00000026262)	ENSPEMG00000008726	ENSPEMG00000029884	ENSPEMG00000030179	ENSPEMG00000026589	ENSPEMG00000028276	ENSPEMG00000024565	ENSPEMG00000026287 #22	Ms4a2 (ENSPEMG00000009344)	Ms4a3 (ENSPEMG00000011172)	Oosp2 (ENSPEMG00000013991)	ENSPEMG00000016369	ENSPEMG00000014022	Cblif (ENSPEMG00000015002)	Mrpl16 (ENSPEMG00000001887)	Stx3 (ENSPEMG00000006730)	ENSPEMG00000007379	ENSPEMG00000008694	Or10v1 (ENSPEMG00000008089)	Patl1 (ENSPEMG00000014215)	Osbp (ENSPEMG00000017130)	ENSPEMG00000025531	Or4d11 (ENSPEMG00000030514)
Prairie vole	MODERN SPECIES	103							ENSMOCG00000022549	ENSMOCG00000000095 #14	Ndc80 (ENSMOCG00000012221) #15	Smchd1 (ENSMOCG00000013945) #16	Emilin2 (ENSMOCG00000000131) #17	Lpin2 (ENSMOCG00000005299) #18	Myom1 (ENSMOCG00000008094) #19	Myl12a (ENSMOCG00000005742) #20	Myl12b (ENSMOCG00000018029) #21	ENSMOCG00000017885 #22	Dlgap1 (ENSMOCG00000003521) #23	Akain1 (ENSMOCG00000012989) #24	Zbtb14 (ENSMOCG00000010611) #26	ENSMOCG00000003079	Epb41l3 (ENSMOCG00000000728) #27	Tmem200c (ENSMOCG00000011720) #28	ENSMOCG00000020294 #29	ENSMOCG00000016924	Arhgap28 (ENSMOCG00000002311)	Mtcl1 (ENSMOCG00000007848)	Rab12 (ENSMOCG00000000452)	Themis3 (ENSMOCG00000009480)	Ptprm (ENSMOCG00000001682)	Lrrc30 (ENSMOCG00000022722)	Lama1 (ENSMOCG00000019094)
Murinae	ANCESTRAL SPECIES	9				ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B	ENSGT00390000016717
Mus	ANCESTRAL SPECIES	16	ENSGT00390000009189	ENSGT00940000154800.ab	ENSGT00940000159280	ENSGT00940000157706	ENSGT00390000002768	ENSGT00940000156217	ENSGT00390000004254	ENSGT00940000154524.b	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B	ENSGT00390000016717
Mus_A	ANCESTRAL SPECIES	10	ENSGT00390000009189	ENSGT00940000154800.ab	ENSGT00940000159280	ENSGT00940000157706	ENSGT00390000002768	ENSGT00940000156217	ENSGT00390000004254	ENSGT00940000154524.b	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B	ENSGT00390000016717
Mus_B	ANCESTRAL SPECIES	9	ENSGT00390000009189	ENSGT00940000154800.ab	ENSGT00940000159280	ENSGT00940000157706	ENSGT00390000002768	ENSGT00940000156217	ENSGT00390000004254	ENSGT00940000154524.b	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B	ENSGT00390000016717
Mouse	MODERN SPECIES	8	Ypel5 (ENSMUSG00000039770)	Alk (ENSMUSG00000055471)	Clip4 (ENSMUSG00000024059)	Pcare (ENSMUSG00000044375)	Togaram2 (ENSMUSG00000045761)	Wdr43 (ENSMUSG00000041057)	Spdya (ENSMUSG00000052525)	Ndc80 (ENSMUSG00000024056) #15	Smchd1 (ENSMUSG00000024054) #16	Emilin2 (ENSMUSG00000024053) #17	Lpin2 (ENSMUSG00000024052) #18	Myom1 (ENSMUSG00000024049) #19	Myl12a (ENSMUSG00000024048) #20	Gm49909 (ENSMUSG00000117098)	Myl12b (ENSMUSG00000034868) #21	Tgif1 (ENSMUSG00000047407) #22	Dlgap1 (ENSMUSG00000003279) #23	Akain1 (ENSMUSG00000091636) #24	Zbtb14 (ENSMUSG00000049672) #26	Epb41l3 (ENSMUSG00000024044) #27	Tmem200c (ENSMUSG00000095407) #28	L3mbtl4 (ENSMUSG00000041565) #29	Arhgap28 (ENSMUSG00000024043)	Lama1 (ENSMUSG00000032796)	Lrrc30 (ENSMUSG00000073375)	Ptprm (ENSMUSG00000033278)	Themis3 (ENSMUSG00000024105)	Rab12 (ENSMUSG00000023460)	Mtcl1 (ENSMUSG00000052105)	Ddx11 (ENSMUSG00000035842)	Washc1 (ENSMUSG00000024101)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00390000009189	ENSGT00940000154800.ab	ENSGT00940000159280	ENSGT00940000157706	ENSGT00390000002768	ENSGT00940000156217	ENSGT00390000004254	ENSGT00940000154524.b	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00530000063770.d	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00950000182970.B	ENSGT00390000016717
spretus	MODERN SPECIES	8	Alk (MGP_SPRETEiJ_G0022776)	Clip4 (MGP_SPRETEiJ_G0022775)	Pcare (MGP_SPRETEiJ_G0022774)	Togaram2 (MGP_SPRETEiJ_G0022773)	Wdr43 (MGP_SPRETEiJ_G0022772)	Spdya (MGP_SPRETEiJ_G0022771)	Ndc80 (MGP_SPRETEiJ_G0022770) #15	MGP_SPRETEiJ_G0022769	Smchd1 (MGP_SPRETEiJ_G0022768) #16	Emilin2 (MGP_SPRETEiJ_G0022767) #17	Lpin2 (MGP_SPRETEiJ_G0022766) #18	Myom1 (MGP_SPRETEiJ_G0022765) #19	Myl12a (MGP_SPRETEiJ_G0022764) #20	Myl12b (MGP_SPRETEiJ_G0022763) #21	MGP_SPRETEiJ_G0022762	Tgif1 (MGP_SPRETEiJ_G0022761) #22	Dlgap1 (MGP_SPRETEiJ_G0022760) #23	Akain1 (MGP_SPRETEiJ_G0022759) #24	MGP_SPRETEiJ_G0022758 #27	Tmem200c (MGP_SPRETEiJ_G0022757) #28	L3mbtl4 (MGP_SPRETEiJ_G0022756) #29	Arhgap28 (MGP_SPRETEiJ_G0022755)	Lama1 (MGP_SPRETEiJ_G0022754)	Lrrc30 (MGP_SPRETEiJ_G0022753)	MGP_SPRETEiJ_G0022752	Themis3 (MGP_SPRETEiJ_G0022751)	Rab12 (MGP_SPRETEiJ_G0022750)	Mtcl1 (MGP_SPRETEiJ_G0022749)	Ddx11 (MGP_SPRETEiJ_G0022748)	Washc1 (MGP_SPRETEiJ_G0022747)	Ndufv2 (MGP_SPRETEiJ_G0022746)
Steppe mouse	MODERN SPECIES	3371							Ndc80 (ENSMSIG00000004967) #15	ENSMSIG00000004957	Smchd1 (ENSMSIG00000004840) #16	Emilin2 (ENSMSIG00000004801) #17	Lpin2 (ENSMSIG00000004627) #18	Myom1 (ENSMSIG00000004331) #19	ENSMSIG00000004252 ##21	Myl12b (ENSMSIG00000004224) #21	ENSMSIG00000004215	Tgif1 (ENSMSIG00000004165) #22	ENSMSIG00000004136	ENSMSIG00000004094	Dlgap1 (ENSMSIG00000003025) #23	Akain1 (ENSMSIG00000002956) #24	ENSMSIG00000002940	Zbtb14 (ENSMSIG00000002900) #26	ENSMSIG00000002374 #27	Tmem200c (ENSMSIG00000002319) #28	L3mbtl4 (ENSMSIG00000002227) #29	Arhgap28 (ENSMSIG00000002010)	Lama1 (ENSMSIG00000001864)	Lrrc30 (ENSMSIG00000001839)	Ptprm (ENSMSIG00000000887)	Themis3 (ENSMSIG00000000792)	Rab12 (ENSMSIG00000000750)
Ryukyu mouse	MODERN SPECIES	8	Lbh (MGP_CAROLIEiJ_G0021866)	Alk (MGP_CAROLIEiJ_G0021865)	Clip4 (MGP_CAROLIEiJ_G0021864)	Pcare (MGP_CAROLIEiJ_G0021863)	Togaram2 (MGP_CAROLIEiJ_G0021862)	Wdr43 (MGP_CAROLIEiJ_G0021861)	Spdya (MGP_CAROLIEiJ_G0021860)	Ndc80 (MGP_CAROLIEiJ_G0021859) #15	MGP_CAROLIEiJ_G0021858	MGP_CAROLIEiJ_G0021857 ##16	Emilin2 (MGP_CAROLIEiJ_G0021856) #17	Lpin2 (MGP_CAROLIEiJ_G0021855) #18	Myom1 (MGP_CAROLIEiJ_G0021854) #19	Myl12a (MGP_CAROLIEiJ_G0021853) #20	Myl12b (MGP_CAROLIEiJ_G0021852) #21	Tgif1 (MGP_CAROLIEiJ_G0021851) #22	Dlgap1 (MGP_CAROLIEiJ_G0021850) #23	Akain1 (MGP_CAROLIEiJ_G0021849) #24	Zbtb14 (MGP_CAROLIEiJ_G0021848) #26	MGP_CAROLIEiJ_G0021847 #27	Tmem200c (MGP_CAROLIEiJ_G0021846) #28	L3mbtl4 (MGP_CAROLIEiJ_G0021845) #29	Arhgap28 (MGP_CAROLIEiJ_G0021844)	Lama1 (MGP_CAROLIEiJ_G0021843)	Lrrc30 (MGP_CAROLIEiJ_G0021842)	Ptprm (MGP_CAROLIEiJ_G0021841)	Themis3 (MGP_CAROLIEiJ_G0021840)	Rab12 (MGP_CAROLIEiJ_G0021839)	Mtcl1 (MGP_CAROLIEiJ_G0021838)	Ddx11 (MGP_CAROLIEiJ_G0021837)	Washc1 (MGP_CAROLIEiJ_G0021836)
Shrew mouse	MODERN SPECIES	9	Lbh (MGP_PahariEiJ_G0020853)	Alk (MGP_PahariEiJ_G0020852)	Clip4 (MGP_PahariEiJ_G0020851)	Pcare (MGP_PahariEiJ_G0020850)	Togaram2 (MGP_PahariEiJ_G0020849)	Wdr43 (MGP_PahariEiJ_G0020848)	Spdya (MGP_PahariEiJ_G0020847)	Ndc80 (MGP_PahariEiJ_G0020846) #15	MGP_PahariEiJ_G0020845	Smchd1 (MGP_PahariEiJ_G0020844) #16	Emilin2 (MGP_PahariEiJ_G0020843) #17	Lpin2 (MGP_PahariEiJ_G0020842) #18	Myom1 (MGP_PahariEiJ_G0020841) #19	Myl12a (MGP_PahariEiJ_G0020840) #20	Myl12b (MGP_PahariEiJ_G0020839) #21	Tgif1 (MGP_PahariEiJ_G0020838) #22	Dlgap1 (MGP_PahariEiJ_G0020837) #23	Akain1 (MGP_PahariEiJ_G0020836) #24	Zbtb14 (MGP_PahariEiJ_G0020835) #26	MGP_PahariEiJ_G0020834 #27	Tmem200c (MGP_PahariEiJ_G0020833) #28	L3mbtl4 (MGP_PahariEiJ_G0020832) #29	Arhgap28 (MGP_PahariEiJ_G0020831)	Lama1 (MGP_PahariEiJ_G0020830)	Lrrc30 (MGP_PahariEiJ_G0020829)	Ptprm (MGP_PahariEiJ_G0020828)	Themis3 (MGP_PahariEiJ_G0020827)	Rab12 (MGP_PahariEiJ_G0020826)	Mtcl1 (MGP_PahariEiJ_G0020825)	Ddx11 (MGP_PahariEiJ_G0020824)	Washc1 (MGP_PahariEiJ_G0020823)
Rat	MODERN SPECIES	19	Tyms (ENSRNOG00000037225)	Yes1 (ENSRNOG00000037227)	Adcyap1 (ENSRNOG00000049882)	Ppidl1 (ENSRNOG00000037230)	ENSRNOG00000068876	Fam114a1l1 (ENSRNOG00000002110)	Mettl4 (ENSRNOG00000026280) #14	ENSRNOG00000069721	Ndc80 (ENSRNOG00000013727) #15	ENSRNOG00000066469	Smchd1 (ENSRNOG00000014319) #16	Emilin2 (ENSRNOG00000014837) #17	Lpin2 (ENSRNOG00000014876) #18	Myom1 (ENSRNOG00000057701) #19	Myl12b (ENSRNOG00000015278) #20	Tgif1 (ENSRNOG00000015906) #22	Dlgap1 (ENSRNOG00000016196) #23	ENSRNOG00000069381	Akain1 (ENSRNOG00000063808) #24	Zfp161 (ENSRNOG00000016719) #26	Epb41l3 (ENSRNOG00000016724) #27	Tmem200c (ENSRNOG00000049880) #28	L3mbtl4 (ENSRNOG00000025273) #29	Rps26-ps4 (ENSRNOG00000056280)	Arhgap28 (ENSRNOG00000017065)	Lama1 (ENSRNOG00000017237)	Lrrc30 (ENSRNOG00000030389)	Ptprm (ENSRNOG00000011700)	Themis3 (ENSRNOG00000012115)	AABR07039169.1 (ENSRNOG00000051198)	Rab12 (ENSRNOG00000019295)
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	894							ENSNGAG00000001249	Mettl4 (ENSNGAG00000000989) #14	Ndc80 (ENSNGAG00000015753) #15	Smchd1 (ENSNGAG00000020402) #16	ENSNGAG00000012685 #17	Lpin2 (ENSNGAG00000023719) #18	Myom1 (ENSNGAG00000024163) #19	Myl12a (ENSNGAG00000016011) #20	Myl12b (ENSNGAG00000015436) #21	ENSNGAG00000017055 #22	Dlgap1 (ENSNGAG00000003251) #23	Akain1 (ENSNGAG00000014300) #24	Zbtb14 (ENSNGAG00000017654) #26	ENSNGAG00000019412 #27	ENSNGAG00000020627 #27	Tmem200c (ENSNGAG00000010989) #28	L3mbtl4 (ENSNGAG00000014474) #29	ENSNGAG00000006931	Arhgap28 (ENSNGAG00000018728)	Lama1 (ENSNGAG00000010298)	Lrrc30 (ENSNGAG00000009990)	Ptprm (ENSNGAG00000007608)	Themis3 (ENSNGAG00000021267)	ENSNGAG00000024103	Mtcl1 (ENSNGAG00000022416)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1601	Sparcl1 (ENSNGAG00000013980)	Gm17660 (ENSNGAG00000017913)	Nudt9 (ENSNGAG00000019950)	Hsd17b11 (ENSNGAG00000006813)	Hsd17b13 (ENSNGAG00000011798)	ENSNGAG00000018962	ENSNGAG00000014096	1700016H13Rik (ENSNGAG00000019259)	Slc10a6 (ENSNGAG00000000716)	Ptpn13 (ENSNGAG00000011185)	Mapk10 (ENSNGAG00000009045)	Arhgap24 (ENSNGAG00000000035)	ENSNGAG00000017344	Wdfy3 (ENSNGAG00000010212)	Cds1 (ENSNGAG00000006898)	ENSNGAG00000012142 #22	ENSNGAG00000012409	Nkx6-1 (ENSNGAG00000003700)	ENSNGAG00000000196	ENSNGAG00000002747	Abraxas1 (ENSNGAG00000013249)	Mrps18c (ENSNGAG00000015980)	Helq (ENSNGAG00000013230)
Lesser Egyptian jerboa	MODERN SPECIES	93	Kcng2 (ENSJJAG00000019923)	Ctdp1 (ENSJJAG00000010330)	Nfatc1 (ENSJJAG00000004285)	Atp9b (ENSJJAG00000012553)	Sall3 (ENSJJAG00000014351)	Galr1 (ENSJJAG00000014911)	ENSJJAG00000016019	Zfp236 (ENSJJAG00000017493)	Smchd1 (ENSJJAG00000003619) #16	Emilin2 (ENSJJAG00000012081) #17	Lpin2 (ENSJJAG00000013799) #18	Myom1 (ENSJJAG00000016402) #19	ENSJJAG00000018032 #20	ENSJJAG00000019155 #21	ENSJJAG00000019202	Tgif1 (ENSJJAG00000009770) #22	Dlgap1 (ENSJJAG00000012760) #23	Akain1 (ENSJJAG00000014944) #24	Zbtb14 (ENSJJAG00000015998) #26	Epb41l3 (ENSJJAG00000017223) #27	Tmem200c (ENSJJAG00000007189) #28	L3mbtl4 (ENSJJAG00000011127) #29	Arhgap28 (ENSJJAG00000017884)	Lama1 (ENSJJAG00000024150)	Lrrc30 (ENSJJAG00000014844)	Ptprm (ENSJJAG00000022917)	Rab12 (ENSJJAG00000019064)	Mtcl1 (ENSJJAG00000022910)
Kangaroo rat	MODERN SPECIES	419								Mettl4 (ENSDORG00000005216) #14	Ndc80 (ENSDORG00000000268) #15	Smchd1 (ENSDORG00000004508) #16	Emilin2 (ENSDORG00000028553) #17	Lpin2 (ENSDORG00000006891) #18	Myom1 (ENSDORG00000009806) #19	ENSDORG00000029581 #20	Myl12b (ENSDORG00000030160) #21	Tgif1 (ENSDORG00000026503) #22	Dlgap1 (ENSDORG00000012414) #23	Akain1 (ENSDORG00000024259) #24	Zbtb14 (ENSDORG00000026644) #26	Epb41l3 (ENSDORG00000014615) #27	L3mbtl4 (ENSDORG00000013048) #29	Arhgap28 (ENSDORG00000001783)	Lama1 (ENSDORG00000010869)	ENSDORG00000027440	Ptprm (ENSDORG00000015704)	ENSDORG00000016414	Rab12 (ENSDORG00000008920)	Mtcl1 (ENSDORG00000009301)	ENSDORG00000028288	Mc5r (ENSDORG00000006765)	Rnmt (ENSDORG00000016722)
Lagomorpha	ANCESTRAL SPECIES	41	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n.p #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000164798	ENSGT00940000162721 #25	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a
Rabbit	MODERN SPECIES	20	COLEC12 (ENSOCUG00000022216)	CETN1 (ENSOCUG00000009188)	CLUL1 (ENSOCUG00000008658)	ENSOCUG00000008667	ENOSF1 (ENSOCUG00000008678)	YES1 (ENSOCUG00000005874)	ADCYAP1 (ENSOCUG00000009463)	ENSOCUG00000024410	METTL4 (ENSOCUG00000022390) #14	NDC80 (ENSOCUG00000015410) #15	SMCHD1 (ENSOCUG00000000020) #16	EMILIN2 (ENSOCUG00000002553) #17	LPIN2 (ENSOCUG00000009433) #18	MYOM1 (ENSOCUG00000008571) #19	ENSOCUG00000021304 #20	TGIF1 (ENSOCUG00000013752) #22	ENSOCUG00000037037	ENSOCUG00000029174	DLGAP1 (ENSOCUG00000013763) #23	AKAIN1 (ENSOCUG00000035231) #24	ENSOCUG00000023402 #25	ZBTB14 (ENSOCUG00000004131) #26	EPB41L3 (ENSOCUG00000021196) #27	ENSOCUG00000032244	TMEM200C (ENSOCUG00000024350) #28	ENSOCUG00000037625	L3MBTL4 (ENSOCUG00000013013) #29	ARHGAP28 (ENSOCUG00000003323)	LAMA1 (ENSOCUG00000009424)	LRRC30 (ENSOCUG00000001704)	ENSOCUG00000032560
Pika	MODERN SPECIES	3668																TGIF1 (ENSOPRG00000000958) #22	DLGAP1 (ENSOPRG00000000972) #23	ENSOPRG00000000982
Tree shrew	MODERN SPECIES	8574															ENSTBEG00000008750	TGIF1 (ENSTBEG00000008845) #22
Primates	ANCESTRAL SPECIES	24	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a
Strepsirrhini	ANCESTRAL SPECIES	22	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058
Lemuriformes	ANCESTRAL SPECIES	25	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058
Lemuriformes_a	ANCESTRAL SPECIES	32	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058
Coquerels sifaka	MODERN SPECIES	522	THOC1 (ENSPCOG00000009234)	COLEC12 (ENSPCOG00000026722)	CLUL1 (ENSPCOG00000026641)	TYMS (ENSPCOG00000023949)	ENOSF1 (ENSPCOG00000016574)	ENSPCOG00000002353	ADCYAP1 (ENSPCOG00000011810)	METTL4 (ENSPCOG00000020273) #14	NDC80 (ENSPCOG00000024438) #15	SMCHD1 (ENSPCOG00000028124) #16	EMILIN2 (ENSPCOG00000023410) #17	LPIN2 (ENSPCOG00000027455) #18	MYOM1 (ENSPCOG00000019999) #19	MYL12A (ENSPCOG00000018571) #20	MYL12B (ENSPCOG00000028244) #21	TGIF1 (ENSPCOG00000013428) #22	DLGAP1 (ENSPCOG00000025011) #23	AKAIN1 (ENSPCOG00000003655) #24	ZBTB14 (ENSPCOG00000027135) #26	EPB41L3 (ENSPCOG00000007637) #27	ENSPCOG00000014927	TMEM200C (ENSPCOG00000020142) #28	ENSPCOG00000026051 #29	ENSPCOG00000021962	ARHGAP28 (ENSPCOG00000018113)	LAMA1 (ENSPCOG00000010084)
Greater bamboo lemur	MODERN SPECIES	325	FGF14 (ENSPSMG00000016444)	TPP2 (ENSPSMG00000016375)	METTL21C (ENSPSMG00000016235)	TEX30 (ENSPSMG00000016225)	POGLUT2 (ENSPSMG00000016189)	ENSPSMG00000016130	METTL21EP (ENSPSMG00000016020)	SLC10A2 (ENSPSMG00000016013)	ENSPSMG00000015983	SMCHD1 (ENSPSMG00000015952) #16	EMILIN2 (ENSPSMG00000015903) #17	LPIN2 (ENSPSMG00000015874) #18	MYOM1 (ENSPSMG00000015775) #19	MYL12A (ENSPSMG00000015629) #20	ENSPSMG00000015612 #21	TGIF1 (ENSPSMG00000015580) #22	DLGAP1 (ENSPSMG00000015083) #23	ENSPSMG00000014669	ENSPSMG00000014657	AKAIN1 (ENSPSMG00000014644) #24	ZBTB14 (ENSPSMG00000014640) #26	EPB41L3 (ENSPSMG00000014474) #27	TMEM200C (ENSPSMG00000014145) #28
Mouse lemur	MODERN SPECIES	10	ENOSF1 (ENSMICG00000014847)	YES1 (ENSMICG00000028620)	ADCYAP1 (ENSMICG00000030488)	ENSMICG00000033941	ENSMICG00000033758	ENSMICG00000029575	METTL4 (ENSMICG00000037155) #14	NDC80 (ENSMICG00000008378) #15	SMCHD1 (ENSMICG00000012555) #16	ENSMICG00000036843	EMILIN2 (ENSMICG00000017574) #17	LPIN2 (ENSMICG00000017575) #18	MYOM1 (ENSMICG00000017883) #19	MYL12A (ENSMICG00000037011) #20	MYL12B (ENSMICG00000027780) #21	TGIF1 (ENSMICG00000029611) #22	DLGAP1 (ENSMICG00000001909) #23	AKAIN1 (ENSMICG00000034961) #24	ZBTB14 (ENSMICG00000034962) #26	EPB41L3 (ENSMICG00000015594) #27	TMEM200C (ENSMICG00000047300) #28	L3MBTL4 (ENSMICG00000015626) #29	ARHGAP28 (ENSMICG00000009879)	LAMA1 (ENSMICG00000007685)	ENSMICG00000031748	PTPRM (ENSMICG00000001715)	RAB12 (ENSMICG00000030661)	MTCL1 (ENSMICG00000002310)	ENSMICG00000037928	ENSMICG00000046653	NDUFV2 (ENSMICG00000038090)
Bushbaby	MODERN SPECIES	328											EMILIN2 (ENSOGAG00000024910) #17	LPIN2 (ENSOGAG00000001326) #18	MYOM1 (ENSOGAG00000001335) #19	MYL12A (ENSOGAG00000001340) #20	MYL12B (ENSOGAG00000029777) #21	TGIF1 (ENSOGAG00000030342) #22	DLGAP1 (ENSOGAG00000013126) #23	ENSOGAG00000027671	ENSOGAG00000013372
Haplorrhini	ANCESTRAL SPECIES	25	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230 #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580	ENSGT00940000154742.a
Simiiformes	DUPLICATION
Simiiformes	ANCESTRAL SPECIES	24	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.`b	ENSGT00940000154742.a
Catarrhini	ANCESTRAL SPECIES	23	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.`b
Hominoidea	ANCESTRAL SPECIES	24	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.`b
Gibbon	MODERN SPECIES	19	CLUL1 (ENSNLEG00000006850)	ENSNLEG00000006854	ENOSF1 (ENSNLEG00000030293)	YES1 (ENSNLEG00000006863)	ADCYAP1 (ENSNLEG00000006864)	ENSNLEG00000029289	METTL4 (ENSNLEG00000006868) #14	NDC80 (ENSNLEG00000006870) #15	SMCHD1 (ENSNLEG00000006877) #16	EMILIN2 (ENSNLEG00000006882) #17	LPIN2 (ENSNLEG00000006886) #18	ENSNLEG00000032827	MYOM1 (ENSNLEG00000006889) #19	MYL12A (ENSNLEG00000026933) #20	MYL12B (ENSNLEG00000032335) #21	ENSNLEG00000028451 #22	DLGAP1 (ENSNLEG00000006910) #23	ENSNLEG00000035249	ENSNLEG00000006916	AKAIN1 (ENSNLEG00000028125) #24	ZBTB14 (ENSNLEG00000006918) #26	EPB41L3 (ENSNLEG00000006919) #27	TMEM200C (ENSNLEG00000006924) #28	L3MBTL4 (ENSNLEG00000006925) #29	ARHGAP28 (ENSNLEG00000006927)	LAMA1 (ENSNLEG00000006930)	LRRC30 (ENSNLEG00000018547)	PTPRM (ENSNLEG00000006934)	ENSNLEG00000006939	MTCL1 (ENSNLEG00000006940)	NDUFV2 (ENSNLEG00000006944)
Hominidae	ANCESTRAL SPECIES	24	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.ab
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	26	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000155622.e.a.a	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Homo/Pan group	ANCESTRAL SPECIES	25	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000155622.e.a.a	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Pan	ANCESTRAL SPECIES	24	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000154174.t	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000155622.e.a.a	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Chimpanzee	MODERN SPECIES	9	TYMS (ENSPTRG00000009822)	ENOSF1 (ENSPTRG00000009823)	YES1 (ENSPTRG00000009824)	ENSPTRG00000048401	ADCYAP1 (ENSPTRG00000009825)	ENSPTRG00000050092	METTL4 (ENSPTRG00000009828) #14	NDC80 (ENSPTRG00000009829) #15	SMCHD1 (ENSPTRG00000009831) #16	EMILIN2 (ENSPTRG00000009832) #17	ENSPTRG00000048371	LPIN2 (ENSPTRG00000009833) #18	MYOM1 (ENSPTRG00000009834) #19	MYL12A (ENSPTRG00000009835) #20	MYL12B (ENSPTRG00000009836) #21	TGIF1 (ENSPTRG00000009838) #22	ENSPTRG00000044604	DLGAP1 (ENSPTRG00000009839) #23	AKAIN1 (ENSPTRG00000052521) #24	ZBTB14 (ENSPTRG00000029352) #26	EPB41L3 (ENSPTRG00000009844) #27	TMEM200C (ENSPTRG00000029353) #28	L3MBTL4 (ENSPTRG00000009845) #29	ARHGAP28 (ENSPTRG00000009847)	ENSPTRG00000050179	LAMA1 (ENSPTRG00000009849)	LRRC30 (ENSPTRG00000029358)	PTPRM (ENSPTRG00000009851)	RAB12 (ENSPTRG00000009853)	MTCL1 (ENSPTRG00000009854)	NDUFV2 (ENSPTRG00000009856)
Bonobo	MODERN SPECIES	9	CEP192 (ENSPPAG00000023155)	ENSPPAG00000039572	YES1 (ENSPPAG00000038900)	ENSPPAG00000042949	ADCYAP1 (ENSPPAG00000031943)	ENSPPAG00000032374	METTL4 (ENSPPAG00000030467) #14	NDC80 (ENSPPAG00000041112) #15	SMCHD1 (ENSPPAG00000037346) #16	EMILIN2 (ENSPPAG00000026444) #17	ENSPPAG00000043766	LPIN2 (ENSPPAG00000036687) #18	MYOM1 (ENSPPAG00000037926) #19	MYL12A (ENSPPAG00000037395) #20	MYL12B (ENSPPAG00000016699) #21	ENSPPAG00000034209 #22	ENSPPAG00000036002	DLGAP1 (ENSPPAG00000032706) #23	ENSPPAG00000030574 #24	ZBTB14 (ENSPPAG00000023957) #26	EPB41L3 (ENSPPAG00000031576) #27	TMEM200C (ENSPPAG00000026280) #28	ENSPPAG00000017617 #29	ARHGAP28 (ENSPPAG00000027220)	ENSPPAG00000041462	LAMA1 (ENSPPAG00000031074)	ENSPPAG00000029118	LRRC30 (ENSPPAG00000032601)	PTPRM (ENSPPAG00000022548)	ENSPPAG00000009152	MTCL1 (ENSPPAG00000034933)
Human	MODERN SPECIES	9	COLEC12 (ENSG00000158270)	CETN1 (ENSG00000177143)	CLUL1 (ENSG00000079101)	TYMS (ENSG00000176890)	ENOSF1 (ENSG00000132199)	YES1 (ENSG00000176105)	ADCYAP1 (ENSG00000141433)	METTL4 (ENSG00000101574) #14	NDC80 (ENSG00000080986) #15	SMCHD1 (ENSG00000101596) #16	EMILIN2 (ENSG00000132205) #17	LPIN2 (ENSG00000101577) #18	MYOM1 (ENSG00000101605) #19	MYL12A (ENSG00000101608) #20	MYL12B (ENSG00000118680) #21	TGIF1 (ENSG00000177426) #22	DLGAP1 (ENSG00000170579) #23	AKAIN1 (ENSG00000231824) #24	ZBTB14 (ENSG00000198081) #26	EPB41L3 (ENSG00000082397) #27	TMEM200C (ENSG00000206432) #28	L3MBTL4 (ENSG00000154655) #29	ARHGAP28 (ENSG00000088756)	LAMA1 (ENSG00000101680)	LRRC30 (ENSG00000206422)	PTPRM (ENSG00000173482)	RAB12 (ENSG00000206418)	MTCL1 (ENSG00000168502)	NDUFV2 (ENSG00000178127)	ANKRD12 (ENSG00000101745)	TWSG1 (ENSG00000128791)
Gorilla	MODERN SPECIES	9	CLUL1 (ENSGGOG00000001325)	TYMS (ENSGGOG00000014000)	ENOSF1 (ENSGGOG00000009826)	YES1 (ENSGGOG00000000651)	ENSGGOG00000027261	ADCYAP1 (ENSGGOG00000036843)	ENSGGOG00000009010	METTL4 (ENSGGOG00000000937) #14	NDC80 (ENSGGOG00000000939) #15	SMCHD1 (ENSGGOG00000017005) #16	EMILIN2 (ENSGGOG00000000329) #17	LPIN2 (ENSGGOG00000000330) #18	MYOM1 (ENSGGOG00000044057) #19	MYL12A (ENSGGOG00000011429) #20	MYL12B (ENSGGOG00000004051) #21	ENSGGOG00000012694 #22	DLGAP1 (ENSGGOG00000034891) #23	AKAIN1 (ENSGGOG00000040105) #24	ZBTB14 (ENSGGOG00000024397) #26	EPB41L3 (ENSGGOG00000012450) #27	ENSGGOG00000026491 #28	L3MBTL4 (ENSGGOG00000015056) #29	ARHGAP28 (ENSGGOG00000000529)	ENSGGOG00000042094	LAMA1 (ENSGGOG00000016323)	ENSGGOG00000042265	LRRC30 (ENSGGOG00000028005)	PTPRM (ENSGGOG00000003702)	ENSGGOG00000002654	MTCL1 (ENSGGOG00000016277)	ENSGGOG00000028489
Orangutan	MODERN SPECIES	9	CLUL1 (ENSPPYG00000009046)	TYMS (ENSPPYG00000009045)	ENOSF1 (ENSPPYG00000009044)	YES1 (ENSPPYG00000009043)	ADCYAP1 (ENSPPYG00000041262)	ENSPPYG00000032286	ENSPPYG00000009000	METTL4 (ENSPPYG00000009040) #14	NDC80 (ENSPPYG00000009039) #15	SMCHD1 (ENSPPYG00000009037) #16	ENSPPYG00000035335	LPIN2 (ENSPPYG00000009036) #18	MYOM1 (ENSPPYG00000009034) #19	MYL12A (ENSPPYG00000009033) #20	MYL12B (ENSPPYG00000009032) #21	ENSPPYG00000009030 #22	DLGAP1 (ENSPPYG00000009027) #23	AKAIN1 (ENSPPYG00000037539) #24	ZBTB14 (ENSPPYG00000009025) #26	EPB41L3 (ENSPPYG00000009024) #27	TMEM200C (ENSPPYG00000009023) #28	L3MBTL4 (ENSPPYG00000009022) #29	ARHGAP28 (ENSPPYG00000009021)	LAMA1 (ENSPPYG00000009019)	LRRC30 (ENSPPYG00000009018)	PTPRM (ENSPPYG00000009016)	RAB12 (ENSPPYG00000009015)	MTCL1 (ENSPPYG00000009014)	NDUFV2 (ENSPPYG00000009013)	ENSPPYG00000033372	ANKRD12 (ENSPPYG00000009012)
Cercopithecidae	ANCESTRAL SPECIES	25	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00510000047760.y.b	ENSGT00940000154920.i.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00910000148828	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00940000165227	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Cercopithecinae	ANCESTRAL SPECIES	22	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00910000148828	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00940000165227	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Vervet Monkey	MODERN SPECIES	9	COLEC12 (ENSCSAG00000017628)	CETN1 (ENSCSAG00000018575)	CLUL1 (ENSCSAG00000017625)	TYMS (ENSCSAG00000017621)	ENOSF1 (ENSCSAG00000017620)	YES1 (ENSCSAG00000017618)	ENSCSAG00000017615	METTL4 (ENSCSAG00000017613) #14	NDC80 (ENSCSAG00000017610) #15	SMCHD1 (ENSCSAG00000017608) #16	EMILIN2 (ENSCSAG00000017605) #17	LPIN2 (ENSCSAG00000017604) #18	MYOM1 (ENSCSAG00000017602) #19	MYL12A (ENSCSAG00000017601) #20	MYL12B (ENSCSAG00000017599) #21	TGIF1 (ENSCSAG00000017597) #22	DLGAP1 (ENSCSAG00000017596) #23	ENSCSAG00000017594	AKAIN1 (ENSCSAG00000017591) #24	ZBTB14 (ENSCSAG00000017588) #26	EPB41L3 (ENSCSAG00000017587) #27	TMEM200C (ENSCSAG00000018576) #28	L3MBTL4 (ENSCSAG00000017582) #29	ARHGAP28 (ENSCSAG00000017578)	ENSCSAG00000017577	ENSCSAG00000017573	LRRC30 (ENSCSAG00000018577)	PTPRM (ENSCSAG00000017571)	RAB12 (ENSCSAG00000017569)	MTCL1 (ENSCSAG00000017568)	NDUFV2 (ENSCSAG00000017564)
Cercopithecinae_a	ANCESTRAL SPECIES	21	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT01030000234866	ENSGT00940000154982 #19	ENSGT00910000148828	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00940000165227	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Macaca	ANCESTRAL SPECIES	22	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT01030000234866	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00940000165227	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Macaca_a	ANCESTRAL SPECIES	21	ENSGT00950000183074.A	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT01030000234866	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000155230.fd #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT01030000240171	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.ab	ENSGT00940000154576.j
Crab-eating macaque	MODERN SPECIES	9	CLUL1 (ENSMFAG00000038811)	TYMS (ENSMFAG00000039357)	ENOSF1 (ENSMFAG00000031046)	YES1 (ENSMFAG00000003203)	ADCYAP1 (ENSMFAG00000050015)	ENSMFAG00000052217	METTL4 (ENSMFAG00000046183) #14	NDC80 (ENSMFAG00000001170) #15	SMCHD1 (ENSMFAG00000038628) #16	ENSMFAG00000056542	EMILIN2 (ENSMFAG00000037105) #17	LPIN2 (ENSMFAG00000038540) #18	ENSMFAG00000044192	MYOM1 (ENSMFAG00000041420) #19	MYL12A (ENSMFAG00000036992) #20	TGIF1 (ENSMFAG00000003221) #22	DLGAP1 (ENSMFAG00000031490) #23	ENSMFAG00000065343	AKAIN1 (ENSMFAG00000031861) #24	ENSMFAG00000057315	ZBTB14 (ENSMFAG00000031970) #26	EPB41L3 (ENSMFAG00000032905) #27	ENSMFAG00000052294	L3MBTL4 (ENSMFAG00000041924) #29	ARHGAP28 (ENSMFAG00000003744)	LAMA1 (ENSMFAG00000007292)	LRRC30 (ENSMFAG00000028007)	PTPRM (ENSMFAG00000002650)	ENSMFAG00000053616	RAB12 (ENSMFAG00000043551)	MTCL1 (ENSMFAG00000044143)
Rhesus	MODERN SPECIES	9	YES1 (ENSMMUG00000004054)	ENSMMUG00000057387	ADCYAP1 (ENSMMUG00000062768)	ENSMMUG00000063067	METTL4 (ENSMMUG00000018950) #14	NDC80 (ENSMMUG00000018952) #15	ENSMMUG00000053753	SMCHD1 (ENSMMUG00000005461) #16	EMILIN2 (ENSMMUG00000017546) #17	LPIN2 (ENSMMUG00000017548) #18	ENSMMUG00000061540	MYOM1 (ENSMMUG00000019892) #19	MYL12B (ENSMMUG00000019893) ##21	ENSMMUG00000063593	ENSMMUG00000063768	TGIF1 (ENSMMUG00000005086) #22	DLGAP1 (ENSMMUG00000001471) #23	AKAIN1 (ENSMMUG00000059913) #24	ENSMMUG00000058439	ZBTB14 (ENSMMUG00000022005) #26	EPB41L3 (ENSMMUG00000019418) #27	TMEM200C (ENSMMUG00000055350) #28	L3MBTL4 (ENSMMUG00000016302) #29	ARHGAP28 (ENSMMUG00000014506)	ENSMMUG00000011408	ENSMMUG00000062466	LRRC30 (ENSMMUG00000049108)	PTPRM (ENSMMUG00000000768)	RAB12 (ENSMMUG00000062113)	MTCL1 (ENSMMUG00000015761)	NDUFV2 (ENSMMUG00000049556)
Pig-tailed macaque	MODERN SPECIES	554								METTL4 (ENSMNEG00000027723) #14	NDC80 (ENSMNEG00000031557) #15	SMCHD1 (ENSMNEG00000030716) #16	EMILIN2 (ENSMNEG00000032507) #17	LPIN2 (ENSMNEG00000035359) #18	ENSMNEG00000027836	MYOM1 (ENSMNEG00000029047) #19	MYL12A (ENSMNEG00000041223) #20	TGIF1 (ENSMNEG00000035101) #22	DLGAP1 (ENSMNEG00000036526) #23	ENSMNEG00000033878	ENSMNEG00000045453	AKAIN1 (ENSMNEG00000031689) #24	ZBTB14 (ENSMNEG00000040776) #26	EPB41L3 (ENSMNEG00000041544) #27	TMEM200C (ENSMNEG00000009357) #28	L3MBTL4 (ENSMNEG00000036243) #29	ARHGAP28 (ENSMNEG00000043678)	ENSMNEG00000002106	ENSMNEG00000044993	LAMA1 (ENSMNEG00000039096)	LRRC30 (ENSMNEG00000013340)	PTPRM (ENSMNEG00000033386)	RAB12 (ENSMNEG00000040853)
Cercopithecinae_b	ANCESTRAL SPECIES	25	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT01030000234866	ENSGT00940000154982 #19	ENSGT00910000148828	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00940000165227	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00910000146973	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A
Olive baboon	MODERN SPECIES	10	CLUL1 (ENSPANG00000023232)	TYMS (ENSPANG00000016982)	ENOSF1 (ENSPANG00000019754)	YES1 (ENSPANG00000005606)	ADCYAP1 (ENSPANG00000042268)	ENSPANG00000051273	METTL4 (ENSPANG00000021862) #14	NDC80 (ENSPANG00000003124) #15	SMCHD1 (ENSPANG00000021485) #16	EMILIN2 (ENSPANG00000003125) #17	ENSPANG00000041277	LPIN2 (ENSPANG00000010436) #18	MYOM1 (ENSPANG00000001638) #19	MYL12A (ENSPANG00000014852) #20	ENSPANG00000045052 ##21	TGIF1 (ENSPANG00000012318) #22	DLGAP1 (ENSPANG00000019969) #23	ENSPANG00000042694	AKAIN1 (ENSPANG00000009807) #24	ZBTB14 (ENSPANG00000003128) #26	EPB41L3 (ENSPANG00000006867) #27	TMEM200C (ENSPANG00000007851) #28	L3MBTL4 (ENSPANG00000008894) #29	ENSPANG00000044570	ENSPANG00000019970	LRRC30 (ENSPANG00000003355)	PTPRM (ENSPANG00000005610)	RAB12 (ENSPANG00000009320)	MTCL1 (ENSPANG00000011897)	ENSPANG00000049362	ENSPANG00000009266
Cercopithecinae_d	ANCESTRAL SPECIES	40	ENSGT00530000063668.A	ENSGT00390000014786	ENSGT00390000014290	ENSGT00940000154920.j	ENSGT00510000047760.y.b	ENSGT00950000183154.b.a.b	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00910000148828	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22	ENSGT00900000143817	ENSGT00940000156220 #23	ENSGT00940000165227	ENSGT00560000078638 #24	ENSGT00940000158052.a #26	ENSGT00940000157047 #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29
Drill	MODERN SPECIES	1203	TYMS (ENSMLEG00000033083)	ENOSF1 (ENSMLEG00000029800)	YES1 (ENSMLEG00000033031)	ENSMLEG00000038566	ADCYAP1 (ENSMLEG00000041063)	METTL4 (ENSMLEG00000036729) #14	NDC80 (ENSMLEG00000034205) #15	SMCHD1 (ENSMLEG00000042656) #16	EMILIN2 (ENSMLEG00000041789) #17	LPIN2 (ENSMLEG00000039895) #18	ENSMLEG00000039724	MYOM1 (ENSMLEG00000031580) #19	MYL12A (ENSMLEG00000027689) #20	MYL12B (ENSMLEG00000022144) #21	ENSMLEG00000033712	TGIF1 (ENSMLEG00000044111) #22	ENSMLEG00000021320	ENSMLEG00000034137	DLGAP1 (ENSMLEG00000033071) #23	ENSMLEG00000031857	AKAIN1 (ENSMLEG00000009942) #24	ZBTB14 (ENSMLEG00000033334) #26	EPB41L3 (ENSMLEG00000042882) #27
Sooty mangabey	MODERN SPECIES	628	CLUL1 (ENSCATG00000045077)	TYMS (ENSCATG00000030133)	ENOSF1 (ENSCATG00000034332)	YES1 (ENSCATG00000036813)	ENSCATG00000029055	ADCYAP1 (ENSCATG00000039535)	METTL4 (ENSCATG00000011642) #14	NDC80 (ENSCATG00000030394) #15	SMCHD1 (ENSCATG00000042044) #16	EMILIN2 (ENSCATG00000032093) #17	LPIN2 (ENSCATG00000037884) #18	MYOM1 (ENSCATG00000018194) #19	ENSCATG00000041600	MYL12A (ENSCATG00000041341) #20	MYL12B (ENSCATG00000031984) #21	TGIF1 (ENSCATG00000000628) #22	DLGAP1 (ENSCATG00000017819) #23	ENSCATG00000030025	ENSCATG00000039667	AKAIN1 (ENSCATG00000023216) #24	ZBTB14 (ENSCATG00000038080) #26	EPB41L3 (ENSCATG00000035372) #27	ENSCATG00000019635	TMEM200C (ENSCATG00000020387) #28	L3MBTL4 (ENSCATG00000035692) #29
Rhinopithecus	ANCESTRAL SPECIES	448						ENSGT01030000234606.a.a.a.a	ENSGT00530000063596.B	ENSGT00940000159481	ENSGT00940000159230	ENSGT00940000156092	ENSGT00940000157336	ENSGT00950000182843.a.a.a.a	ENSGT00940000157393	ENSGT00390000004927	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd #22
Black snub-nosed monkey	MODERN SPECIES	599												LPIN2 (ENSRBIG00000032868) #18	MYOM1 (ENSRBIG00000034307) #19	MYL12A (ENSRBIG00000003046) #20	MYL12B (ENSRBIG00000034511) #21	TGIF1 (ENSRBIG00000023893) #22
Golden snub-nosed monkey	MODERN SPECIES	2831							METTL4 (ENSRROG00000032893) #14	NDC80 (ENSRROG00000040588) #15	SMCHD1 (ENSRROG00000036215) #16	EMILIN2 (ENSRROG00000043099) #17	LPIN2 (ENSRROG00000034072) #18	MYOM1 (ENSRROG00000032442) #19	ENSRROG00000029308	MYL12A (ENSRROG00000043381) #20	MYL12B (ENSRROG00000017363) #21	TGIF1 (ENSRROG00000036088) #22	DLGAP1 (ENSRROG00000033265) #23	ENSRROG00000038371	ENSRROG00000005640	ENSRROG00000035268	ENSRROG00000030024
Platyrrhini	DUPLICATION
Platyrrhini	ANCESTRAL SPECIES	26	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786.w	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd.a #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a.f #26	ENSGT00940000157047.i #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.`b	ENSGT00940000154742.a	ENSGT00390000007058
Cebidae	ANCESTRAL SPECIES	28	ENSGT00940000157209.jb	ENSGT00530000063668.A	ENSGT00390000014786.w	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd.a #22	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a.f #26	ENSGT00940000157047.i #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.ab	ENSGT00940000154742.a	ENSGT00390000007058
Marmoset	MODERN SPECIES	4	ADCYAP1 (ENSCJAG00000045833)	ENSCJAG00000045947	ENSCJAG00000062931	METTL4 (ENSCJAG00000000092) #14	NDC80 (ENSCJAG00000000078) #15	ENSCJAG00000000071 #16	ENSCJAG00000043001	ENSCJAG00000053051	ENSCJAG00000070355	EMILIN2 (ENSCJAG00000012955) #17	LPIN2 (ENSCJAG00000012946) #18	MYOM1 (ENSCJAG00000012917) #19	ENSCJAG00000012890 ##21	MYL12B (ENSCJAG00000080160) #21	ENSCJAG00000040414	ENSCJAG00000012865 #22	DLGAP1 (ENSCJAG00000012856) #23	ENSCJAG00000076723	ENSCJAG00000049819 #16	ENSCJAG00000080148	ENSCJAG00000080111	ENSCJAG00000064609	ENSCJAG00000085054	AKAIN1 (ENSCJAG00000042385) #24	ZBTB14 (ENSCJAG00000048541) #26	ENSCJAG00000015728 #27	ENSCJAG00000081743	ENSCJAG00000085204	TMEM200C (ENSCJAG00000038374) #28	L3MBTL4 (ENSCJAG00000015716) #29	ENSCJAG00000023104
Cebidae_a	ANCESTRAL SPECIES	23	ENSGT00390000014786.w	ENSGT00390000014290	ENSGT00940000154920	ENSGT00950000183154.b.a.b	ENSGT00940000165544	ENSGT00390000016237 #14	ENSGT00530000063169.b.b	ENSGT00390000010218.e.b	ENSGT00390000018386 #15	ENSGT00390000006950.n #16	ENSGT01030000234633.B.a #17	ENSGT00940000156313 #18	ENSGT00940000154982 #19	ENSGT00940000153607.c.a #20	ENSGT00940000153607.c.b #21	ENSGT00940000155230.fd.a #22	ENSGT00910000148299	ENSGT00940000156220 #23	ENSGT00560000078638 #24	ENSGT00940000158052.a.f #26	ENSGT00940000157047.i #27	ENSGT00530000063698.a.b #28	ENSGT00940000158264.a #29	ENSGT00940000158929	ENSGT00940000157124	ENSGT00940000161019	ENSGT00940000155020	ENSGT00940000159325	ENSGT00950000182982.A	ENSGT00390000017580.`b	ENSGT00940000154742.a.o
Capuchin	MODERN SPECIES	41							METTL4 (ENSCCAG00000020235) #14	ENSCCAG00000033549	NDC80 (ENSCCAG00000032553) #15	SMCHD1 (ENSCCAG00000030527) #16	EMILIN2 (ENSCCAG00000029681) #17	LPIN2 (ENSCCAG00000035561) #18	MYOM1 (ENSCCAG00000022741) #19	MYL12A (ENSCCAG00000029033) #20	MYL12B (ENSCCAG00000013854) #21	TGIF1 (ENSCCAG00000027574) #22	HUNK (ENSCCAG00000028641)	YPEL (ENSCCAG00000001926)	MRAP (ENSCCAG00000037447)	URB1 (ENSCCAG00000021299)	EVA1C (ENSCCAG00000021119)	CFAP298 (ENSCCAG00000027358)	SYNJ1 (ENSCCAG00000020825)	ENSCCAG00000022424	PAXBP1 (ENSCCAG00000020942)	C21orf62 (ENSCCAG00000037763)	OLIG2 (ENSCCAG00000024351)	OLIG1 (ENSCCAG00000010149)	IFNAR2 (ENSCCAG00000022451)	IL10RB (ENSCCAG00000030174)	IFNAR1 (ENSCCAG00000025224)
Bolivian squirrel monkey	MODERN SPECIES	53	COLEC12 (ENSSBOG00000030126)	CLUL1 (ENSSBOG00000035239)	TYMS (ENSSBOG00000021422)	ENOSF1 (ENSSBOG00000035498)	YES1 (ENSSBOG00000034837)	ADCYAP1 (ENSSBOG00000028158)	ENSSBOG00000025141	METTL4 (ENSSBOG00000033623) #14	NDC80 (ENSSBOG00000035772) #15	SMCHD1 (ENSSBOG00000030266) #16	EMILIN2 (ENSSBOG00000029862) #17	LPIN2 (ENSSBOG00000026923) #18	MYOM1 (ENSSBOG00000036143) #19	MYL12A (ENSSBOG00000019169) #20	ENSSBOG00000022177 #21	TGIF1 (ENSSBOG00000036056) #22	DLGAP1 (ENSSBOG00000031193) #23	ENSSBOG00000031178	ENSSBOG00000035366	AKAIN1 (ENSSBOG00000031954) #24	ZBTB14 (ENSSBOG00000034371) #26	EPB41L3 (ENSSBOG00000024756) #27	ENSSBOG00000025802	TMEM200C (ENSSBOG00000034209) #28	L3MBTL4 (ENSSBOG00000023649) #29	ARHGAP28 (ENSSBOG00000031680)	ENSSBOG00000036132	LAMA1 (ENSSBOG00000033137)	ENSSBOG00000018693	LRRC30 (ENSSBOG00000009092)	PTPRM (ENSSBOG00000035977)
Mas night monkey	MODERN SPECIES	627				ENSANAG00000022662	METTL4 (ENSANAG00000028394) #14	ENSANAG00000022861	NDC80 (ENSANAG00000026423) #15	SMCHD1 (ENSANAG00000035458) #16	ENSANAG00000023466	EMILIN2 (ENSANAG00000033716) #17	LPIN2 (ENSANAG00000034006) #18	MYOM1 (ENSANAG00000023556) #19	ENSANAG00000019883 #20	MYL12B (ENSANAG00000028363) #21	ENSANAG00000029379	TGIF1 (ENSANAG00000020401) #22	ENSANAG00000037343	DLGAP1 (ENSANAG00000021635) #23	ENSANAG00000007877	AKAIN1 (ENSANAG00000025419) #24	ENSANAG00000035293 #26	EPB41L3 (ENSANAG00000020372) #27	ENSANAG00000035230	TMEM200C (ENSANAG00000023265) #28	L3MBTL4 (ENSANAG00000025058) #29	ARHGAP28 (ENSANAG00000036554)	LAMA1 (ENSANAG00000028013)	LRRC30 (ENSANAG00000020024)	PTPRM (ENSANAG00000034856)	RAB12 (ENSANAG00000021061)	MTCL1 (ENSANAG00000014340)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000155230.fd.b #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000155230.fd.b #22
Marmoset	MODERN SPECIES	1	GPR176 (ENSCJAG00000020926)	FSIP1 (ENSCJAG00000020927)	THBS1 (ENSCJAG00000020936)	ENSCJAG00000077457	ENSCJAG00000075593	ENSCJAG00000068940	RASGRP1 (ENSCJAG00000020961)	FAM98B (ENSCJAG00000069791)	SPRED1 (ENSCJAG00000038730)	TMCO5A (ENSCJAG00000020986)	MEIS2 (ENSCJAG00000020992)	CDIN1 (ENSCJAG00000021003)	ENSCJAG00000074596	DPH6 (ENSCJAG00000021006)	ENSCJAG00000023281	ENSCJAG00000061682 #22	ZNF770 (ENSCJAG00000021013)	AQR (ENSCJAG00000021021)	ACTC1 (ENSCJAG00000021047)	GJD2 (ENSCJAG00000067910)	ENSCJAG00000075351	ARHGAP11A (ENSCJAG00000021054)	SCG5 (ENSCJAG00000021060)	GREM1 (ENSCJAG00000073529)	ENSCJAG00000084905	FMN1 (ENSCJAG00000021067)	RYR3 (ENSCJAG00000035611)	AVEN (ENSCJAG00000021101)	CHRM5 (ENSCJAG00000023282)	EMC7 (ENSCJAG00000021103)	PGBD4 (ENSCJAG00000023283)
Simiiformes	ANCESTRAL SPECIES																	ENSGT00940000155230.gd #22
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237	ENSGT00570000080851
Hominoidea	ANCESTRAL SPECIES		ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237	ENSGT00570000080851
Gibbon	MODERN SPECIES	7	ENSNLEG00000002792	ENSNLEG00000032967	GNG8 (ENSNLEG00000002788)	PTGIR (ENSNLEG00000002780)	CALM3 (ENSNLEG00000002752)	ENSNLEG00000002751	PNMA8B (ENSNLEG00000002750)	PNMA8A (ENSNLEG00000002749)	PNMA8C (ENSNLEG00000030454)	ENSNLEG00000030898	ENSNLEG00000002747	PPP5C (ENSNLEG00000002629)	HIF3A (ENSNLEG00000002481)	IGFL1 (ENSNLEG00000002458)	ENSNLEG00000002443	ENSNLEG00000032323 #22	IGFL3 (ENSNLEG00000002440)	IGFL4 (ENSNLEG00000002438)	PGLYRP1 (ENSNLEG00000002422)	CCDC61 (ENSNLEG00000002402)	ENSNLEG00000002399	MYPOP (ENSNLEG00000002401)	IRF2BP1 (ENSNLEG00000018408)	FOXA3 (ENSNLEG00000002392)	SYMPK (ENSNLEG00000002369)	RSPH6A (ENSNLEG00000002328)	DMWD (ENSNLEG00000002321)	DMPK (ENSNLEG00000002298)	ENSNLEG00000002295	MEIOSIN (ENSNLEG00000002294)	ENSNLEG00000031904
Hominidae	ANCESTRAL SPECIES		ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237	ENSGT00570000080851
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785.j	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237	ENSGT00570000080851
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785.j	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237	ENSGT00570000080851
Pan	ANCESTRAL SPECIES	9	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785.j	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237	ENSGT00570000080851
Bonobo	MODERN SPECIES	10	STRN4 (ENSPPAG00000035898)	PRKD2 (ENSPPAG00000037267)	ENSPPAG00000041113	GNG8 (ENSPPAG00000033557)	PTGIR (ENSPPAG00000041949)	CALM3 (ENSPPAG00000037613)	ENSPPAG00000035628	PNMA8B (ENSPPAG00000042091)	PNMA8A (ENSPPAG00000033527)	PNMA8C (ENSPPAG00000008304)	CCDC8 (ENSPPAG00000042195)	PPP5C (ENSPPAG00000038591)	HIF3A (ENSPPAG00000042427)	ENSPPAG00000032796	IGFL2 (ENSPPAG00000029197)	ENSPPAG00000029552 #22	IGFL3 (ENSPPAG00000022284)	IGFL4 (ENSPPAG00000040782)	PGLYRP1 (ENSPPAG00000039034)	ENSPPAG00000030915	ENSPPAG00000035049	NANOS2 (ENSPPAG00000020568)	MYPOP (ENSPPAG00000017638)	FOXA3 (ENSPPAG00000042745)	SYMPK (ENSPPAG00000043204)	RSPH6A (ENSPPAG00000043932)	DMWD (ENSPPAG00000037733)	DMPK (ENSPPAG00000043247)	ENSPPAG00000037802	MEIOSIN (ENSPPAG00000042669)	FBXO46 (ENSPPAG00000022797)
Chimpanzee	MODERN SPECIES	10	STRN4 (ENSPTRG00000011192)	PRKD2 (ENSPTRG00000011190)	DACT3 (ENSPTRG00000028961)	GNG8 (ENSPTRG00000043557)	PTGIR (ENSPTRG00000011186)	CALM3 (ENSPTRG00000011185)	PPP5D1 (ENSPTRG00000039811)	ENSPTRG00000028962	PNMA8A (ENSPTRG00000011183)	PNMA8C (ENSPTRG00000048654)	CCDC8 (ENSPTRG00000011182)	PPP5C (ENSPTRG00000011181)	HIF3A (ENSPTRG00000011180)	IGFL1 (ENSPTRG00000011179)	IGFL2 (ENSPTRG00000041643)	ENSPTRG00000050670 #22	IGFL3 (ENSPTRG00000011176)	IGFL4 (ENSPTRG00000051124)	PGLYRP1 (ENSPTRG00000011175)	CCDC61 (ENSPTRG00000039834)	NOVA2 (ENSPTRG00000011173)	NANOS2 (ENSPTRG00000011172)	MYPOP (ENSPTRG00000028972)	IRF2BP1 (ENSPTRG00000011171)	FOXA3 (ENSPTRG00000011170)	SYMPK (ENSPTRG00000011169)	RSPH6A (ENSPTRG00000011168)	DMWD (ENSPTRG00000011165)	DMPK (ENSPTRG00000011166)	SIX5 (ENSPTRG00000033681)	MEIOSIN (ENSPTRG00000041781)
Gorilla	MODERN SPECIES	10	FKRP (ENSGGOG00000043279)	STRN4 (ENSGGOG00000010169)	PRKD2 (ENSGGOG00000010508)	ENSGGOG00000043507	PTGIR (ENSGGOG00000013112)	CALM3 (ENSGGOG00000000212)	ENSGGOG00000024504	ENSGGOG00000015668	PNMA8A (ENSGGOG00000001214)	PNMA8C (ENSGGOG00000040172)	CCDC8 (ENSGGOG00000016630)	PPP5C (ENSGGOG00000007562)	HIF3A (ENSGGOG00000007551)	IGFL1 (ENSGGOG00000011461)	IGFL2 (ENSGGOG00000024074)	ENSGGOG00000028458 #22	IGFL3 (ENSGGOG00000005560)	IGFL4 (ENSGGOG00000027623)	PGLYRP1 (ENSGGOG00000011126)	ENSGGOG00000011115	NOVA2 (ENSGGOG00000000325)	NANOS2 (ENSGGOG00000013447)	MYPOP (ENSGGOG00000017080)	IRF2BP1 (ENSGGOG00000023972)	FOXA3 (ENSGGOG00000003972)	SYMPK (ENSGGOG00000003410)	RSPH6A (ENSGGOG00000003405)	DMWD (ENSGGOG00000007982)	DMPK (ENSGGOG00000007967)	SIX5 (ENSGGOG00000007958)	BHMG1 (ENSGGOG00000036840)
Orangutan	MODERN SPECIES	10	SLC1A5 (ENSPPYG00000010161)	FKRP (ENSPPYG00000010160)	STRN4 (ENSPPYG00000010159)	PRKD2 (ENSPPYG00000010158)	DACT3 (ENSPPYG00000010157)	PTGIR (ENSPPYG00000010155)	CALM3 (ENSPPYG00000010154)	ENSPPYG00000031172	PNMA8B (ENSPPYG00000010152)	PNMA8A (ENSPPYG00000035419)	PNMA8C (ENSPPYG00000037781)	CCDC8 (ENSPPYG00000010150)	PPP5C (ENSPPYG00000010148)	HIF3A (ENSPPYG00000010147)	IGFL1 (ENSPPYG00000040323)	ENSPPYG00000040668 #22	IGFL3 (ENSPPYG00000010144)	ENSPPYG00000029912	IGFL4 (ENSPPYG00000010142)	PGLYRP1 (ENSPPYG00000010141)	CCDC61 (ENSPPYG00000010140)	NOVA2 (ENSPPYG00000010139)	NANOS2 (ENSPPYG00000010138)	ENSPPYG00000031914	IRF2BP1 (ENSPPYG00000010136)	FOXA3 (ENSPPYG00000010580)	SYMPK (ENSPPYG00000010135)	RSPH6A (ENSPPYG00000010134)	DMWD (ENSPPYG00000010133)	DMPK (ENSPPYG00000010132)	SIX5 (ENSPPYG00000010131)
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000017625.d	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237
Rhinopithecus	ANCESTRAL SPECIES	16	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.B.f	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT00390000015797.c.b.d	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00390000009557.A.b	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000017625.d	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237
Golden snub-nosed monkey	MODERN SPECIES	2027	FKRP (ENSRROG00000007497)	STRN4 (ENSRROG00000042099)	PRKD2 (ENSRROG00000034944)	DACT3 (ENSRROG00000044269)	ENSRROG00000045208	PTGIR (ENSRROG00000035701)	CALM3 (ENSRROG00000033594)	ENSRROG00000035990	PNMA8A (ENSRROG00000013610)	PNMA8C (ENSRROG00000027253)	ENSRROG00000038440	PPP5C (ENSRROG00000027318)	HIF3A (ENSRROG00000032780)	IGFL1 (ENSRROG00000029689)	IGFL2 (ENSRROG00000012003)	ENSRROG00000045549 #22	IGFL3 (ENSRROG00000039749)	ENSRROG00000043631	IGFL4 (ENSRROG00000043261)	PGLYRP1 (ENSRROG00000035762)	CCDC61 (ENSRROG00000032654)	NOVA2 (ENSRROG00000037399)	NANOS2 (ENSRROG00000014903)	MYPOP (ENSRROG00000031078)	IRF2BP1 (ENSRROG00000024812)	FOXA3 (ENSRROG00000041934)	SYMPK (ENSRROG00000024834)	RSPH6A (ENSRROG00000038540)	DMWD (ENSRROG00000036990)	DMPK (ENSRROG00000037325)	SIX5 (ENSRROG00000026145)
Black snub-nosed monkey	MODERN SPECIES	477	SLC1A5 (ENSRBIG00000032793)	STRN4 (ENSRBIG00000030977)	PRKD2 (ENSRBIG00000002509)	ENSRBIG00000037645	GNG8 (ENSRBIG00000040120)	PTGIR (ENSRBIG00000039814)	ENSRBIG00000040350	PNMA8B (ENSRBIG00000043852)	PNMA8A (ENSRBIG00000032652)	PNMA8C (ENSRBIG00000007752)	ENSRBIG00000041650	PPP5C (ENSRBIG00000043486)	HIF3A (ENSRBIG00000037340)	IGFL1 (ENSRBIG00000041594)	IGFL2 (ENSRBIG00000013672)	ENSRBIG00000037692 #22	ENSRBIG00000041617	ENSRBIG00000026369	IGFL4 (ENSRBIG00000017354)	PGLYRP1 (ENSRBIG00000041217)	CCDC61 (ENSRBIG00000027796)	NANOS2 (ENSRBIG00000023726)	MYPOP (ENSRBIG00000035669)	IRF2BP1 (ENSRBIG00000025631)	FOXA3 (ENSRBIG00000037992)	SYMPK (ENSRBIG00000040963)	RSPH6A (ENSRBIG00000044850)	DMWD (ENSRBIG00000038254)	DMPK (ENSRBIG00000033839)	SIX5 (ENSRBIG00000013549)	MEIOSIN (ENSRBIG00000043746)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000159485	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000017625.d	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000159485	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000017625.d	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237
Cercopithecinae_b	ANCESTRAL SPECIES	23	ENSGT00940000159485	ENSGT00390000017583	ENSGT00950000183095.a.b.a.b.a	ENSGT00950000183024.a.b.b	ENSGT00950000183181.B.b	ENSGT01100000263497.D	ENSGT01050000244902.b.d	ENSGT00950000182980.a.b.a.a.a	ENSGT01030000234522.C.b.f.b.b	ENSGT01030000234522.C.b.f.b.a	ENSGT01030000234522.C.b.e.b.a.a.b	ENSGT01030000234522.C.b.f.a	ENSGT00940000158785	ENSGT00940000161745	ENSGT00390000009557.C	ENSGT00940000155230.gd #22	ENSGT00390000009557.A.a	ENSGT00390000017625.d	ENSGT00390000009557.B	ENSGT00940000161006	ENSGT00940000154133.B	ENSGT00940000161740	ENSGT00950000183135.A.a	ENSGT00450000040421	ENSGT00940000162120	ENSGT00940000162453	ENSGT00390000017045	ENSGT00500000044869.a.b	ENSGT00390000007686.a	ENSGT00940000162019	ENSGT00940000162237
Olive baboon	MODERN SPECIES	12	STRN4 (ENSPANG00000017664)	PRKD2 (ENSPANG00000008367)	DACT3 (ENSPANG00000021672)	GNG8 (ENSPANG00000029260)	PTGIR (ENSPANG00000019287)	ENSPANG00000015474	PNMA8B (ENSPANG00000039504)	PNMA8A (ENSPANG00000018286)	PNMA8C (ENSPANG00000033741)	CCDC8 (ENSPANG00000020252)	ENSPANG00000029483	PPP5C (ENSPANG00000002966)	HIF3A (ENSPANG00000014598)	ENSPANG00000044504	ENSPANG00000039314	ENSPANG00000038110 #22	IGFL3 (ENSPANG00000019926)	PGLYRP1 (ENSPANG00000048485)	CCDC61 (ENSPANG00000009365)	NOVA2 (ENSPANG00000023868)	NANOS2 (ENSPANG00000009327)	MYPOP (ENSPANG00000046784)	IRF2BP1 (ENSPANG00000002641)	FOXA3 (ENSPANG00000034535)	SYMPK (ENSPANG00000019930)	RSPH6A (ENSPANG00000011597)	DMWD (ENSPANG00000001288)	DMPK (ENSPANG00000002664)	SIX5 (ENSPANG00000005316)	MEIOSIN (ENSPANG00000018287)	FBXO46 (ENSPANG00000002640)
Platyrrhini	ANCESTRAL SPECIES																	ENSGT00940000155230.gd #22
Cebidae	ANCESTRAL SPECIES																	ENSGT00940000155230.gd #22
Marmoset	MODERN SPECIES	17	TNFSF12 (ENSCJAG00000039733)	TNFSF13 (ENSCJAG00000032369)	SENP3 (ENSCJAG00000015137)	EIF4A1 (ENSCJAG00000015114)	CD68 (ENSCJAG00000048079)	MPDU1 (ENSCJAG00000015095)	SOX15 (ENSCJAG00000007951)	FXR2 (ENSCJAG00000015063)	SAT2 (ENSCJAG00000015055)	SHBG (ENSCJAG00000015035)	ATP1B2 (ENSCJAG00000015019)	TP53 (ENSCJAG00000014978)	WRAP53 (ENSCJAG00000014965)	EFNB3 (ENSCJAG00000044444)	DNAH2 (ENSCJAG00000014881)	ENSCJAG00000084720 #22	KDM6B (ENSCJAG00000014850)	TMEM88 (ENSCJAG00000083328)	NAA38 (ENSCJAG00000014843)	CYB5D1 (ENSCJAG00000014841)	CHD3 (ENSCJAG00000014766)	RNF227 (ENSCJAG00000041018)	KCNAB3 (ENSCJAG00000014760)	TRAPPC1 (ENSCJAG00000072023)	CNTROB (ENSCJAG00000014727)	GUCY2D (ENSCJAG00000014688)	ALOX12B (ENSCJAG00000014652)	ALOXE3 (ENSCJAG00000014599)	HES7 (ENSCJAG00000014589)	PER1 (ENSCJAG00000014556)	VAMP2 (ENSCJAG00000014540)
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	796																ENSTSYG00000034680 #22
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	7337						METTL4 (ENSTSYG00000005777) #14	NDC80 (ENSTSYG00000005807) #15	SMCHD1 (ENSTSYG00000005460) #16	ENSTSYG00000026320	EMILIN2 (ENSTSYG00000003553) #17	LPIN2 (ENSTSYG00000012231) #18	MYOM1 (ENSTSYG00000005623) #19	ENSTSYG00000030971 #20	MYL12B (ENSTSYG00000005569) #21	ENSTSYG00000037506	TGIF1 (ENSTSYG00000008982) #22
Tarsier	MODERN SPECIES	5801										RNF19A (ENSTSYG00000029101)	SPAG1 (ENSTSYG00000000424)	POLR2K (ENSTSYG00000003640)	FBXO43 (ENSTSYG00000008181)	RGS22 (ENSTSYG00000008139)	ENSTSYG00000000843	ENSTSYG00000029453 #22	VPS13B (ENSTSYG00000002291)