Vertebrata ANCESTRAL SPECIES ENSGT00940000155230 #22 Gnathostomata ANCESTRAL SPECIES 154 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a #9 ENSGT00390000006950 #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607 #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a Euteleostomi ANCESTRAL SPECIES 74 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000006950 #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607 #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00940000166845 ENSGT00390000017580 Sarcopterygii ANCESTRAL SPECIES 3 ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000006950 #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607 #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00940000166845 ENSGT00390000017580 Tetrapoda ANCESTRAL SPECIES 1 ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000006950 #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607 #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00940000166845 ENSGT00390000017580 Amniota ANCESTRAL SPECIES 3 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Mammalia ANCESTRAL SPECIES 3 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Theria ANCESTRAL SPECIES 7 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Eutheria ANCESTRAL SPECIES 20 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Boreoeutheria ANCESTRAL SPECIES 22 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Euarchontoglires ANCESTRAL SPECIES 22 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Euarchontoglires_A ANCESTRAL SPECIES 22 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Glires ANCESTRAL SPECIES 23 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Rodentia ANCESTRAL SPECIES 23 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Rodentia_A ANCESTRAL SPECIES 23 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Hystricomorpha ANCESTRAL SPECIES 32 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.o.a.b #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Hystricomorpha_a ANCESTRAL SPECIES 26 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.o.a.b #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Hystricomorpha_b ANCESTRAL SPECIES 21 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.o.a.b #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Degu MODERN SPECIES 116 ENOSF1 (ENSODEG00000005113) #7 YES1 (ENSODEG00000005726) #8 ADCYAP1 (ENSODEG00000007089) #9 ENSODEG00000007303 #10 ENSODEG00000019310 #11 METTL4 (ENSODEG00000006068) #12 NDC80 (ENSODEG00000006479) #13 ENSODEG00000006655 #14 SMCHD1 (ENSODEG00000006113) #15 EMILIN2 (ENSODEG00000007278) #16 LPIN2 (ENSODEG00000005432) #17 ENSODEG00000006584 #18 MYOM1 (ENSODEG00000006774) #19 MYL12A (ENSODEG00000006110) #20 ENSODEG00000005356 #21 TGIF1 (ENSODEG00000005910) #22 DLGAP1 (ENSODEG00000006056) #23 ENSODEG00000008032 #24 AKAIN1 (ENSODEG00000007027) #25 ZBTB14 (ENSODEG00000007228) #26 EPB41L3 (ENSODEG00000007473) #27 ARHGAP28 (ENSODEG00000005750) #28 ENSODEG00000005712 #29 LAMA1 (ENSODEG00000006017) #30 ENSODEG00000019415 #31 ENSODEG00000007064 #32 RAB12 (ENSODEG00000006414) #33 MTCL1 (ENSODEG00000006449) #34 Long-tailed chinchilla MODERN SPECIES 109 CLUL1 (ENSCLAG00000011935) TYMS (ENSCLAG00000011426) ENOSF1 (ENSCLAG00000008600) #7 YES1 (ENSCLAG00000007748) #8 ADCYAP1 (ENSCLAG00000007209) #9 ENSCLAG00000007052 ENSCLAG00000011958 METTL4 (ENSCLAG00000011739) #12 NDC80 (ENSCLAG00000011120) #13 SMCHD1 (ENSCLAG00000008351) #15 EMILIN2 (ENSCLAG00000007221) #16 LPIN2 (ENSCLAG00000016431) #17 MYOM1 (ENSCLAG00000009876) #19 MYL12A (ENSCLAG00000011666) #20 MYL12B (ENSCLAG00000008854) #21 TGIF1 (ENSCLAG00000008448) #22 DLGAP1 (ENSCLAG00000007165) #23 AKAIN1 (ENSCLAG00000012253) #25 ZBTB14 (ENSCLAG00000015733) #26 EPB41L3 (ENSCLAG00000009191) #27 ARHGAP28 (ENSCLAG00000009327) #28 LAMA1 (ENSCLAG00000016313) #30 LRRC30 (ENSCLAG00000017849) PTPRM (ENSCLAG00000012021) #32 ENSCLAG00000011714 RAB12 (ENSCLAG00000008683) #33 MTCL1 (ENSCLAG00000010836) #34 NDUFV2 (ENSCLAG00000008537) ANKRD12 (ENSCLAG00000007955) TWSG1 (ENSCLAG00000010627) RALBP1 (ENSCLAG00000008823) Guinea pig MODERN SPECIES 82 METTL4 (ENSCPOG00000005833) #12 NDC80 (ENSCPOG00000005838) #13 SMCHD1 (ENSCPOG00000001596) #15 EMILIN2 (ENSCPOG00000037480) #16 LPIN2 (ENSCPOG00000023844) #17 MYOM1 (ENSCPOG00000012792) #19 MYL12A (ENSCPOG00000037183) #20 ENSCPOG00000040606 #22 DLGAP1 (ENSCPOG00000006550) #23 ENSCPOG00000039039 #25 ZBTB14 (ENSCPOG00000025607) #26 EPB41L3 (ENSCPOG00000004412) #27 TMEM200C (ENSCPOG00000038683) ARHGAP28 (ENSCPOG00000013280) #28 LAMA1 (ENSCPOG00000013286) #30 ENSCPOG00000006937 #31 PTPRM (ENSCPOG00000038437) #32 ENSCPOG00000025094 RAB12 (ENSCPOG00000022689) #33 MTCL1 (ENSCPOG00000013933) #34 NDUFV2 (ENSCPOG00000037853) ANKRD12 (ENSCPOG00000032722) TWSG1 (ENSCPOG00000025437) Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 9 ADCYAP1 (ENSHGLG00000034296) #9 ENSHGLG00000046692 ENSHGLG00000041049 ENSHGLG00000035395 ENSHGLG00000038851 ENSHGLG00000004061 ENSHGLG00000004250 #12 ENSHGLG00000033709 ENSHGLG00000006458 #13 SMCHD1 (ENSHGLG00000003560) #15 ENSHGLG00000044239 #16 LPIN2 (ENSHGLG00000007840) #17 MYOM1 (ENSHGLG00000014511) #19 MYL12A (ENSHGLG00000040455) #20 MYL12B (ENSHGLG00000034781) #21 TGIF1 (ENSHGLG00000018765) #22 ENSHGLG00000036933 #23 ENSHGLG00000006158 ENSHGLG00000042452 ENSHGLG00000006262 ENSHGLG00000042885 ENSHGLG00000007011 #25 ENSHGLG00000046379 #26 EPB41L3 (ENSHGLG00000010311) #27 ENSHGLG00000034855 ENSHGLG00000020714 ARHGAP28 (ENSHGLG00000006823) #28 LAMA1 (ENSHGLG00000009921) #30 ENSHGLG00000042487 LRRC30 (ENSHGLG00000020514) PTPRM (ENSHGLG00000008461) #32 Naked mole-rat female MODERN SPECIES 7 IL6ST (ENSHGLG00000002605) ENSHGLG00000017887 ANKRD55 (ENSHGLG00000002248) ENSHGLG00000019923 ENSHGLG00000037743 ENSHGLG00000002155 MAP3K1 (ENSHGLG00000008852) ENSHGLG00000016353 SETD9 (ENSHGLG00000007843) MIER3 (ENSHGLG00000007522) ENSHGLG00000049674 ENSHGLG00000047590 GPBP1 (ENSHGLG00000006461) ENSHGLG00000048618 ACTBL2 (ENSHGLG00000020239) ENSHGLG00000005073 #22 PLK2 (ENSHGLG00000004619) GAPT (ENSHGLG00000035104) RAB3C (ENSHGLG00000004380) ENSHGLG00000046236 ENSHGLG00000049862 ENSHGLG00000043409 ENSHGLG00000034016 PDE4D (ENSHGLG00000007099) DEPDC1B (ENSHGLG00000019523) ELOVL7 (ENSHGLG00000041515) ENSHGLG00000019517 NDUFAF2 (ENSHGLG00000049827) ENSHGLG00000019502 ZSWIM6 (ENSHGLG00000003187) ENSHGLG00000002012 Sciuridae ANCESTRAL SPECIES 31 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.gb ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325.n #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Eurasian red squirrel MODERN SPECIES 4 CLUL1 (ENSSVLG00005022648) ENSSVLG00005022566 ENOSF1 (ENSSVLG00005022213) #7 ENSSVLG00005022001 #8 ADCYAP1 (ENSSVLG00005021960) #9 ENSSVLG00005021938 ENSSVLG00005021834 #12 NDC80 (ENSSVLG00005021715) #13 ENSSVLG00005021684 SMCHD1 (ENSSVLG00005021629) #15 EMILIN2 (ENSSVLG00005021595) #16 LPIN2 (ENSSVLG00005021537) #17 MYOM1 (ENSSVLG00005020656) #19 MYL12A (ENSSVLG00005020518) #20 MYL12B (ENSSVLG00005020487) #21 TGIF1 (ENSSVLG00005020396) #22 DLGAP1 (ENSSVLG00005019856) #23 ENSSVLG00005019491 #29 AKAIN1 (ENSSVLG00005019389) #25 ENSSVLG00005019313 ZBTB14 (ENSSVLG00005019264) #26 EPB41L3 (ENSSVLG00005018950) #27 TMEM200C (ENSSVLG00005018871) L3MBTL4 (ENSSVLG00005018713) ARHGAP28 (ENSSVLG00005018157) #28 ENSSVLG00005018044 #30 LRRC30 (ENSSVLG00005018021) ENSSVLG00005017979 PTPRM (ENSSVLG00005017846) #32 ENSSVLG00005017768 ENSSVLG00005017727 Marmotini ANCESTRAL SPECIES 31 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.gb ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325.n #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Marmotini_b ANCESTRAL SPECIES 195 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00390000002886.b.b ENSGT00940000162359 ENSGT00940000164798 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a Arctic ground squirrel MODERN SPECIES 139 METTL4 (ENSUPAG00010005108) #12 NDC80 (ENSUPAG00010005138) #13 SMCHD1 (ENSUPAG00010005174) #15 EMILIN2 (ENSUPAG00010005299) #16 LPIN2 (ENSUPAG00010005308) #17 MYOM1 (ENSUPAG00010005334) #19 ENSUPAG00010005444 #20 MYL12B (ENSUPAG00010005460) #21 TGIF1 (ENSUPAG00010005473) #22 DLGAP1 (ENSUPAG00010005500) #23 AKAIN1 (ENSUPAG00010006283) #25 ENSUPAG00010006290 ZBTB14 (ENSUPAG00010006293) #26 EPB41L3 (ENSUPAG00010006308) #27 TMEM200C (ENSUPAG00010006662) L3MBTL4 (ENSUPAG00010006670) Squirrel MODERN SPECIES 272 ADCYAP1 (ENSSTOG00000011453) #9 ENSSTOG00000024466 METTL4 (ENSSTOG00000004283) #12 NDC80 (ENSSTOG00000013062) #13 SMCHD1 (ENSSTOG00000022898) #15 EMILIN2 (ENSSTOG00000026733) #16 LPIN2 (ENSSTOG00000005772) #17 MYOM1 (ENSSTOG00000005796) #19 MYL12A (ENSSTOG00000027658) #20 MYL12B (ENSSTOG00000019788) #21 TGIF1 (ENSSTOG00000027485) #22 DLGAP1 (ENSSTOG00000001728) #23 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 20 ENSMMMG00000002799 KCNQ5 (ENSMMMG00000002823) ENSMMMG00000002902 DPPA5 (ENSMMMG00000002922) ENSMMMG00000002931 ENSMMMG00000002946 ENSMMMG00000002966 ENSMMMG00000002973 ENSMMMG00000002997 CGAS (ENSMMMG00000003022) MTO1 (ENSMMMG00000003047) ENSMMMG00000003132 ENSMMMG00000003421 SLC17A5 (ENSMMMG00000003439) CD109 (ENSMMMG00000003475) ENSMMMG00000003553 #22 Alpin marmot MODERN SPECIES 10 ENSMMMG00000010580 CETN1 (ENSMMMG00000010586) CLUL1 (ENSMMMG00000010598) TYMS (ENSMMMG00000010633) ENOSF1 (ENSMMMG00000010652) #7 YES1 (ENSMMMG00000010661) #8 ADCYAP1 (ENSMMMG00000010782) #9 METTL4 (ENSMMMG00000010797) #12 NDC80 (ENSMMMG00000010813) #13 SMCHD1 (ENSMMMG00000010857) #15 EMILIN2 (ENSMMMG00000011901) #16 LPIN2 (ENSMMMG00000011908) #17 MYOM1 (ENSMMMG00000011990) #19 MYL12A (ENSMMMG00000012076) #20 MYL12B (ENSMMMG00000012089) #21 TGIF1 (ENSMMMG00000012104) #22 DLGAP1 (ENSMMMG00000012118) #23 AKAIN1 (ENSMMMG00000012852) #25 ENSMMMG00000012857 ZBTB14 (ENSMMMG00000012859) #26 EPB41L3 (ENSMMMG00000012882) #27 L3MBTL4 (ENSMMMG00000013328) ARHGAP28 (ENSMMMG00000013408) #28 LAMA1 (ENSMMMG00000013463) #30 LRRC30 (ENSMMMG00000013552) PTPRM (ENSMMMG00000013579) #32 ENSMMMG00000013697 ENSMMMG00000013713 #33 ENSMMMG00000013760 ENSMMMG00000013764 MTCL1 (ENSMMMG00000013768) #34 Rodentia_B ANCESTRAL SPECIES 27 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Myomorpha ANCESTRAL SPECIES 45 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Muroidea ANCESTRAL SPECIES 46 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B Muroidea_A ANCESTRAL SPECIES 19 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B Cricetidae ANCESTRAL SPECIES 19 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B Cricetinae ANCESTRAL SPECIES 3 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B ENSGT00390000016717 Golden Hamster MODERN SPECIES 747 ENSMAUG00000008517 ENSMAUG00000017822 Mettl4 (ENSMAUG00000004504) #12 Ndc80 (ENSMAUG00000005822) #13 ENSMAUG00000009467 Smchd1 (ENSMAUG00000020732) #15 Emilin2 (ENSMAUG00000008934) #16 Lpin2 (ENSMAUG00000009579) #17 Myom1 (ENSMAUG00000012755) #19 Myl12a (ENSMAUG00000018600) #20 ENSMAUG00000018223 #22 Dlgap1 (ENSMAUG00000019471) #23 Akain1 (ENSMAUG00000020687) #25 Zbtb14 (ENSMAUG00000014139) #26 Epb41l3 (ENSMAUG00000011827) #27 ENSMAUG00000019846 Tmem200c (ENSMAUG00000014507) L3mbtl4 (ENSMAUG00000001573) Arhgap28 (ENSMAUG00000016331) #28 Lama1 (ENSMAUG00000000452) #30 Lrrc30 (ENSMAUG00000002146) ENSMAUG00000013283 #32 ENSMAUG00000001486 #32 Themis3 (ENSMAUG00000011734) Rab12 (ENSMAUG00000008371) #33 Mtcl1 (ENSMAUG00000014436) #34 Chinese hamster chok1gshd MODERN SPECIES 1 ENSCGRG00001007268 #7 Yes1 (ENSCGRG00001012390) #8 Adcyap1 (ENSCGRG00001007071) #9 ENSCGRG00001010839 ENSCGRG00001012413 ENSCGRG00001010099 Mettl4 (ENSCGRG00001005723) #12 ENSCGRG00001009792 Ndc80 (ENSCGRG00001011888) #13 Smchd1 (ENSCGRG00001011971) #15 Emilin2 (ENSCGRG00001005288) #16 Lpin2 (ENSCGRG00001012322) #17 Myom1 (ENSCGRG00001012204) #19 Myl12a (ENSCGRG00001011344) #20 Myl12b (ENSCGRG00001011388) #21 Tgif1 (ENSCGRG00001007018) #22 Dlgap1 (ENSCGRG00001010521) #23 Akain1 (ENSCGRG00001011277) #25 Zbtb14 (ENSCGRG00001011456) #26 Epb41l3 (ENSCGRG00001007547) #27 Tmem200c (ENSCGRG00001010878) L3mbtl4 (ENSCGRG00001011431) Arhgap28 (ENSCGRG00001005575) #28 Lama1 (ENSCGRG00001011536) #30 Lrrc30 (ENSCGRG00001010374) Ptprm (ENSCGRG00001011796) #32 Themis3 (ENSCGRG00001011260) Rab12 (ENSCGRG00001006958) #33 Mtcl1 (ENSCGRG00001004149) #34 ENSCGRG00001010133 Ddx11 (ENSCGRG00001004560) Cricetidae_B ANCESTRAL SPECIES 62 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Northern American deer mouse DUPLICATION Northern American deer mouse MODERN SPECIES 4 ENSPEMG00000029175 Tyms (ENSPEMG00000022684) ENSPEMG00000023960 #7 ENSPEMG00000030907 #8 Adcyap1 (ENSPEMG00000026939) #9 ENSPEMG00000021079 ENSPEMG00000021564 ENSPEMG00000012275 #12 Ndc80 (ENSPEMG00000011873) #13 Smchd1 (ENSPEMG00000010741) #15 Emilin2 (ENSPEMG00000000648) #16 Lpin2 (ENSPEMG00000016819) #17 Myom1 (ENSPEMG00000010271) #19 Myl12a (ENSPEMG00000021243) #20 Myl12b (ENSPEMG00000022144) #21 ENSPEMG00000026379 #22 ENSPEMG00000031236 Dlgap1 (ENSPEMG00000020719) #23 ENSPEMG00000027160 ENSPEMG00000025947 Akain1 (ENSPEMG00000024985) #25 Zbtb14 (ENSPEMG00000016649) #26 Epb41l3 (ENSPEMG00000009758) #27 Tmem200c (ENSPEMG00000026206) L3mbtl4 (ENSPEMG00000001103) Arhgap28 (ENSPEMG00000020350) #28 Lama1 (ENSPEMG00000021586) #30 Lrrc30 (ENSPEMG00000003079) Ptprm (ENSPEMG00000024155) #32 Themis3 (ENSPEMG00000021070) Rab12 (ENSPEMG00000021032) #33 Northern American deer mouse MODERN SPECIES ENSPEMG00000029012 ENSPEMG00000005907 Or9q1 (ENSPEMG00000030928) Or9i14 (ENSPEMG00000028210) ENSPEMG00000027169 Or9q2 (ENSPEMG00000028521) Or1s2 (ENSPEMG00000029030) Or10q12 (ENSPEMG00000026052) Or10q1 (ENSPEMG00000026262) ENSPEMG00000008726 ENSPEMG00000029884 ENSPEMG00000030179 ENSPEMG00000026589 ENSPEMG00000028276 ENSPEMG00000024565 ENSPEMG00000026287 #22 Ms4a2 (ENSPEMG00000009344) Ms4a3 (ENSPEMG00000011172) Oosp2 (ENSPEMG00000013991) ENSPEMG00000016369 ENSPEMG00000014022 Cblif (ENSPEMG00000015002) Mrpl16 (ENSPEMG00000001887) Stx3 (ENSPEMG00000006730) ENSPEMG00000007379 ENSPEMG00000008694 Or10v1 (ENSPEMG00000008089) Patl1 (ENSPEMG00000014215) Osbp (ENSPEMG00000017130) ENSPEMG00000025531 Or4d11 (ENSPEMG00000030514) Prairie vole MODERN SPECIES 103 ENSMOCG00000022549 ENSMOCG00000000095 #12 Ndc80 (ENSMOCG00000012221) #13 Smchd1 (ENSMOCG00000013945) #15 Emilin2 (ENSMOCG00000000131) #16 Lpin2 (ENSMOCG00000005299) #17 Myom1 (ENSMOCG00000008094) #19 Myl12a (ENSMOCG00000005742) #20 Myl12b (ENSMOCG00000018029) #21 ENSMOCG00000017885 #22 Dlgap1 (ENSMOCG00000003521) #23 Akain1 (ENSMOCG00000012989) #25 Zbtb14 (ENSMOCG00000010611) #26 ENSMOCG00000003079 Epb41l3 (ENSMOCG00000000728) #27 Tmem200c (ENSMOCG00000011720) ENSMOCG00000020294 ENSMOCG00000016924 Arhgap28 (ENSMOCG00000002311) #28 Mtcl1 (ENSMOCG00000007848) #34 Rab12 (ENSMOCG00000000452) #33 Themis3 (ENSMOCG00000009480) Ptprm (ENSMOCG00000001682) #32 Lrrc30 (ENSMOCG00000022722) Lama1 (ENSMOCG00000019094) #30 Murinae ANCESTRAL SPECIES 9 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B ENSGT00390000016717 Mus ANCESTRAL SPECIES 16 ENSGT00390000009189 ENSGT00940000154800.ab ENSGT00940000159280 ENSGT00940000157706 ENSGT00390000002768 ENSGT00940000156217 ENSGT00390000004254 ENSGT00940000154524.b ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B ENSGT00390000016717 Mus_A ANCESTRAL SPECIES 10 ENSGT00390000009189 ENSGT00940000154800.ab ENSGT00940000159280 ENSGT00940000157706 ENSGT00390000002768 ENSGT00940000156217 ENSGT00390000004254 ENSGT00940000154524.b ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B ENSGT00390000016717 Mus_B ANCESTRAL SPECIES 9 ENSGT00390000009189 ENSGT00940000154800.ab ENSGT00940000159280 ENSGT00940000157706 ENSGT00390000002768 ENSGT00940000156217 ENSGT00390000004254 ENSGT00940000154524.b ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B ENSGT00390000016717 Mouse MODERN SPECIES 8 Ypel5 (ENSMUSG00000039770) Alk (ENSMUSG00000055471) Clip4 (ENSMUSG00000024059) Pcare (ENSMUSG00000044375) Togaram2 (ENSMUSG00000045761) Wdr43 (ENSMUSG00000041057) Spdya (ENSMUSG00000052525) Ndc80 (ENSMUSG00000024056) #13 Smchd1 (ENSMUSG00000024054) #15 Emilin2 (ENSMUSG00000024053) #16 Lpin2 (ENSMUSG00000024052) #17 Myom1 (ENSMUSG00000024049) #19 Myl12a (ENSMUSG00000024048) #20 Gm49909 (ENSMUSG00000117098) Myl12b (ENSMUSG00000034868) #21 Tgif1 (ENSMUSG00000047407) #22 Dlgap1 (ENSMUSG00000003279) #23 Akain1 (ENSMUSG00000091636) #25 Zbtb14 (ENSMUSG00000049672) #26 Epb41l3 (ENSMUSG00000024044) #27 Tmem200c (ENSMUSG00000095407) L3mbtl4 (ENSMUSG00000041565) Arhgap28 (ENSMUSG00000024043) #28 Lama1 (ENSMUSG00000032796) #30 Lrrc30 (ENSMUSG00000073375) Ptprm (ENSMUSG00000033278) #32 Themis3 (ENSMUSG00000024105) Rab12 (ENSMUSG00000023460) #33 Mtcl1 (ENSMUSG00000052105) #34 Ddx11 (ENSMUSG00000035842) Washc1 (ENSMUSG00000024101) Mus_C ANCESTRAL SPECIES 9 ENSGT00390000009189 ENSGT00940000154800.ab ENSGT00940000159280 ENSGT00940000157706 ENSGT00390000002768 ENSGT00940000156217 ENSGT00390000004254 ENSGT00940000154524.b ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00530000063770.d ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182970.B ENSGT00390000016717 spretus MODERN SPECIES 8 Alk (MGP_SPRETEiJ_G0022776) Clip4 (MGP_SPRETEiJ_G0022775) Pcare (MGP_SPRETEiJ_G0022774) Togaram2 (MGP_SPRETEiJ_G0022773) Wdr43 (MGP_SPRETEiJ_G0022772) Spdya (MGP_SPRETEiJ_G0022771) Ndc80 (MGP_SPRETEiJ_G0022770) #13 MGP_SPRETEiJ_G0022769 Smchd1 (MGP_SPRETEiJ_G0022768) #15 Emilin2 (MGP_SPRETEiJ_G0022767) #16 Lpin2 (MGP_SPRETEiJ_G0022766) #17 Myom1 (MGP_SPRETEiJ_G0022765) #19 Myl12a (MGP_SPRETEiJ_G0022764) #20 Myl12b (MGP_SPRETEiJ_G0022763) #21 MGP_SPRETEiJ_G0022762 Tgif1 (MGP_SPRETEiJ_G0022761) #22 Dlgap1 (MGP_SPRETEiJ_G0022760) #23 Akain1 (MGP_SPRETEiJ_G0022759) #25 MGP_SPRETEiJ_G0022758 #27 Tmem200c (MGP_SPRETEiJ_G0022757) L3mbtl4 (MGP_SPRETEiJ_G0022756) Arhgap28 (MGP_SPRETEiJ_G0022755) #28 Lama1 (MGP_SPRETEiJ_G0022754) #30 Lrrc30 (MGP_SPRETEiJ_G0022753) MGP_SPRETEiJ_G0022752 #32 Themis3 (MGP_SPRETEiJ_G0022751) Rab12 (MGP_SPRETEiJ_G0022750) #33 Mtcl1 (MGP_SPRETEiJ_G0022749) #34 Ddx11 (MGP_SPRETEiJ_G0022748) Washc1 (MGP_SPRETEiJ_G0022747) Ndufv2 (MGP_SPRETEiJ_G0022746) Steppe mouse MODERN SPECIES 3371 Ndc80 (ENSMSIG00000004967) #13 ENSMSIG00000004957 Smchd1 (ENSMSIG00000004840) #15 Emilin2 (ENSMSIG00000004801) #16 Lpin2 (ENSMSIG00000004627) #17 Myom1 (ENSMSIG00000004331) #19 ENSMSIG00000004252 ##21 Myl12b (ENSMSIG00000004224) #21 ENSMSIG00000004215 Tgif1 (ENSMSIG00000004165) #22 ENSMSIG00000004136 ENSMSIG00000004094 Dlgap1 (ENSMSIG00000003025) #23 Akain1 (ENSMSIG00000002956) #25 ENSMSIG00000002940 Zbtb14 (ENSMSIG00000002900) #26 ENSMSIG00000002374 #27 Tmem200c (ENSMSIG00000002319) L3mbtl4 (ENSMSIG00000002227) Arhgap28 (ENSMSIG00000002010) #28 Lama1 (ENSMSIG00000001864) #30 Lrrc30 (ENSMSIG00000001839) Ptprm (ENSMSIG00000000887) #32 Themis3 (ENSMSIG00000000792) Rab12 (ENSMSIG00000000750) #33 Ryukyu mouse MODERN SPECIES 8 Lbh (MGP_CAROLIEiJ_G0021866) Alk (MGP_CAROLIEiJ_G0021865) Clip4 (MGP_CAROLIEiJ_G0021864) Pcare (MGP_CAROLIEiJ_G0021863) Togaram2 (MGP_CAROLIEiJ_G0021862) Wdr43 (MGP_CAROLIEiJ_G0021861) Spdya (MGP_CAROLIEiJ_G0021860) Ndc80 (MGP_CAROLIEiJ_G0021859) #13 MGP_CAROLIEiJ_G0021858 MGP_CAROLIEiJ_G0021857 ##15 Emilin2 (MGP_CAROLIEiJ_G0021856) #16 Lpin2 (MGP_CAROLIEiJ_G0021855) #17 Myom1 (MGP_CAROLIEiJ_G0021854) #19 Myl12a (MGP_CAROLIEiJ_G0021853) #20 Myl12b (MGP_CAROLIEiJ_G0021852) #21 Tgif1 (MGP_CAROLIEiJ_G0021851) #22 Dlgap1 (MGP_CAROLIEiJ_G0021850) #23 Akain1 (MGP_CAROLIEiJ_G0021849) #25 Zbtb14 (MGP_CAROLIEiJ_G0021848) #26 MGP_CAROLIEiJ_G0021847 #27 Tmem200c (MGP_CAROLIEiJ_G0021846) L3mbtl4 (MGP_CAROLIEiJ_G0021845) Arhgap28 (MGP_CAROLIEiJ_G0021844) #28 Lama1 (MGP_CAROLIEiJ_G0021843) #30 Lrrc30 (MGP_CAROLIEiJ_G0021842) Ptprm (MGP_CAROLIEiJ_G0021841) #32 Themis3 (MGP_CAROLIEiJ_G0021840) Rab12 (MGP_CAROLIEiJ_G0021839) #33 Mtcl1 (MGP_CAROLIEiJ_G0021838) #34 Ddx11 (MGP_CAROLIEiJ_G0021837) Washc1 (MGP_CAROLIEiJ_G0021836) Shrew mouse MODERN SPECIES 9 Lbh (MGP_PahariEiJ_G0020853) Alk (MGP_PahariEiJ_G0020852) Clip4 (MGP_PahariEiJ_G0020851) Pcare (MGP_PahariEiJ_G0020850) Togaram2 (MGP_PahariEiJ_G0020849) Wdr43 (MGP_PahariEiJ_G0020848) Spdya (MGP_PahariEiJ_G0020847) Ndc80 (MGP_PahariEiJ_G0020846) #13 MGP_PahariEiJ_G0020845 Smchd1 (MGP_PahariEiJ_G0020844) #15 Emilin2 (MGP_PahariEiJ_G0020843) #16 Lpin2 (MGP_PahariEiJ_G0020842) #17 Myom1 (MGP_PahariEiJ_G0020841) #19 Myl12a (MGP_PahariEiJ_G0020840) #20 Myl12b (MGP_PahariEiJ_G0020839) #21 Tgif1 (MGP_PahariEiJ_G0020838) #22 Dlgap1 (MGP_PahariEiJ_G0020837) #23 Akain1 (MGP_PahariEiJ_G0020836) #25 Zbtb14 (MGP_PahariEiJ_G0020835) #26 MGP_PahariEiJ_G0020834 #27 Tmem200c (MGP_PahariEiJ_G0020833) L3mbtl4 (MGP_PahariEiJ_G0020832) Arhgap28 (MGP_PahariEiJ_G0020831) #28 Lama1 (MGP_PahariEiJ_G0020830) #30 Lrrc30 (MGP_PahariEiJ_G0020829) Ptprm (MGP_PahariEiJ_G0020828) #32 Themis3 (MGP_PahariEiJ_G0020827) Rab12 (MGP_PahariEiJ_G0020826) #33 Mtcl1 (MGP_PahariEiJ_G0020825) #34 Ddx11 (MGP_PahariEiJ_G0020824) Washc1 (MGP_PahariEiJ_G0020823) Rat MODERN SPECIES 19 Tyms (ENSRNOG00000037225) Yes1 (ENSRNOG00000037227) #8 Adcyap1 (ENSRNOG00000049882) #9 Ppidl1 (ENSRNOG00000037230) ENSRNOG00000068876 Fam114a1l1 (ENSRNOG00000002110) Mettl4 (ENSRNOG00000026280) #12 ENSRNOG00000069721 Ndc80 (ENSRNOG00000013727) #13 ENSRNOG00000066469 Smchd1 (ENSRNOG00000014319) #15 Emilin2 (ENSRNOG00000014837) #16 Lpin2 (ENSRNOG00000014876) #17 Myom1 (ENSRNOG00000057701) #19 Myl12b (ENSRNOG00000015278) #20 Tgif1 (ENSRNOG00000015906) #22 Dlgap1 (ENSRNOG00000016196) #23 ENSRNOG00000069381 Akain1 (ENSRNOG00000063808) #25 Zfp161 (ENSRNOG00000016719) #26 Epb41l3 (ENSRNOG00000016724) #27 Tmem200c (ENSRNOG00000049880) L3mbtl4 (ENSRNOG00000025273) Rps26-ps4 (ENSRNOG00000056280) Arhgap28 (ENSRNOG00000017065) #28 Lama1 (ENSRNOG00000017237) #30 Lrrc30 (ENSRNOG00000030389) Ptprm (ENSRNOG00000011700) #32 Themis3 (ENSRNOG00000012115) AABR07039169.1 (ENSRNOG00000051198) Rab12 (ENSRNOG00000019295) #33 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 894 ENSNGAG00000001249 Mettl4 (ENSNGAG00000000989) #12 Ndc80 (ENSNGAG00000015753) #13 Smchd1 (ENSNGAG00000020402) #15 ENSNGAG00000012685 #16 Lpin2 (ENSNGAG00000023719) #17 Myom1 (ENSNGAG00000024163) #19 Myl12a (ENSNGAG00000016011) #20 Myl12b (ENSNGAG00000015436) #21 ENSNGAG00000017055 #22 Dlgap1 (ENSNGAG00000003251) #23 Akain1 (ENSNGAG00000014300) #25 Zbtb14 (ENSNGAG00000017654) #26 ENSNGAG00000019412 #27 ENSNGAG00000020627 #27 Tmem200c (ENSNGAG00000010989) L3mbtl4 (ENSNGAG00000014474) ENSNGAG00000006931 Arhgap28 (ENSNGAG00000018728) #28 Lama1 (ENSNGAG00000010298) #30 Lrrc30 (ENSNGAG00000009990) Ptprm (ENSNGAG00000007608) #32 Themis3 (ENSNGAG00000021267) ENSNGAG00000024103 #33 Mtcl1 (ENSNGAG00000022416) #34 Upper Galilee mountains blind mole rat MODERN SPECIES 1601 Sparcl1 (ENSNGAG00000013980) Gm17660 (ENSNGAG00000017913) Nudt9 (ENSNGAG00000019950) Hsd17b11 (ENSNGAG00000006813) Hsd17b13 (ENSNGAG00000011798) ENSNGAG00000018962 ENSNGAG00000014096 1700016H13Rik (ENSNGAG00000019259) Slc10a6 (ENSNGAG00000000716) Ptpn13 (ENSNGAG00000011185) Mapk10 (ENSNGAG00000009045) Arhgap24 (ENSNGAG00000000035) ENSNGAG00000017344 Wdfy3 (ENSNGAG00000010212) Cds1 (ENSNGAG00000006898) ENSNGAG00000012142 #22 ENSNGAG00000012409 Nkx6-1 (ENSNGAG00000003700) ENSNGAG00000000196 ENSNGAG00000002747 Abraxas1 (ENSNGAG00000013249) Mrps18c (ENSNGAG00000015980) Helq (ENSNGAG00000013230) Lesser Egyptian jerboa MODERN SPECIES 93 Kcng2 (ENSJJAG00000019923) Ctdp1 (ENSJJAG00000010330) Nfatc1 (ENSJJAG00000004285) Atp9b (ENSJJAG00000012553) Sall3 (ENSJJAG00000014351) Galr1 (ENSJJAG00000014911) ENSJJAG00000016019 Zfp236 (ENSJJAG00000017493) Smchd1 (ENSJJAG00000003619) #15 Emilin2 (ENSJJAG00000012081) #16 Lpin2 (ENSJJAG00000013799) #17 Myom1 (ENSJJAG00000016402) #19 ENSJJAG00000018032 #20 ENSJJAG00000019155 #21 ENSJJAG00000019202 Tgif1 (ENSJJAG00000009770) #22 Dlgap1 (ENSJJAG00000012760) #23 Akain1 (ENSJJAG00000014944) #25 Zbtb14 (ENSJJAG00000015998) #26 Epb41l3 (ENSJJAG00000017223) #27 Tmem200c (ENSJJAG00000007189) L3mbtl4 (ENSJJAG00000011127) Arhgap28 (ENSJJAG00000017884) #28 Lama1 (ENSJJAG00000024150) #30 Lrrc30 (ENSJJAG00000014844) Ptprm (ENSJJAG00000022917) #32 Rab12 (ENSJJAG00000019064) #33 Mtcl1 (ENSJJAG00000022910) #34 Kangaroo rat MODERN SPECIES 419 Mettl4 (ENSDORG00000005216) #12 Ndc80 (ENSDORG00000000268) #13 Smchd1 (ENSDORG00000004508) #15 Emilin2 (ENSDORG00000028553) #16 Lpin2 (ENSDORG00000006891) #17 Myom1 (ENSDORG00000009806) #19 ENSDORG00000029581 #20 Myl12b (ENSDORG00000030160) #21 Tgif1 (ENSDORG00000026503) #22 Dlgap1 (ENSDORG00000012414) #23 Akain1 (ENSDORG00000024259) #25 Zbtb14 (ENSDORG00000026644) #26 Epb41l3 (ENSDORG00000014615) #27 L3mbtl4 (ENSDORG00000013048) Arhgap28 (ENSDORG00000001783) #28 Lama1 (ENSDORG00000010869) #30 ENSDORG00000027440 Ptprm (ENSDORG00000015704) #32 ENSDORG00000016414 Rab12 (ENSDORG00000008920) #33 Mtcl1 (ENSDORG00000009301) #34 ENSDORG00000028288 Mc5r (ENSDORG00000006765) Rnmt (ENSDORG00000016722) Lagomorpha ANCESTRAL SPECIES 41 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n.p #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000164798 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Rabbit MODERN SPECIES 20 COLEC12 (ENSOCUG00000022216) CETN1 (ENSOCUG00000009188) CLUL1 (ENSOCUG00000008658) ENSOCUG00000008667 ENOSF1 (ENSOCUG00000008678) #7 YES1 (ENSOCUG00000005874) #8 ADCYAP1 (ENSOCUG00000009463) #9 ENSOCUG00000024410 METTL4 (ENSOCUG00000022390) #12 NDC80 (ENSOCUG00000015410) #13 SMCHD1 (ENSOCUG00000000020) #15 EMILIN2 (ENSOCUG00000002553) #16 LPIN2 (ENSOCUG00000009433) #17 MYOM1 (ENSOCUG00000008571) #19 ENSOCUG00000021304 #20 TGIF1 (ENSOCUG00000013752) #22 ENSOCUG00000037037 ENSOCUG00000029174 DLGAP1 (ENSOCUG00000013763) #23 AKAIN1 (ENSOCUG00000035231) #25 ENSOCUG00000023402 ZBTB14 (ENSOCUG00000004131) #26 EPB41L3 (ENSOCUG00000021196) #27 ENSOCUG00000032244 TMEM200C (ENSOCUG00000024350) ENSOCUG00000037625 L3MBTL4 (ENSOCUG00000013013) ARHGAP28 (ENSOCUG00000003323) #28 LAMA1 (ENSOCUG00000009424) #30 LRRC30 (ENSOCUG00000001704) ENSOCUG00000032560 Pika MODERN SPECIES 3668 TGIF1 (ENSOPRG00000000958) #22 DLGAP1 (ENSOPRG00000000972) #23 ENSOPRG00000000982 Tree shrew MODERN SPECIES 8574 ENSTBEG00000008750 TGIF1 (ENSTBEG00000008845) #22 Primates ANCESTRAL SPECIES 24 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Strepsirrhini ANCESTRAL SPECIES 22 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Lemuriformes ANCESTRAL SPECIES 25 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Lemuriformes_a ANCESTRAL SPECIES 32 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Coquerels sifaka MODERN SPECIES 522 THOC1 (ENSPCOG00000009234) COLEC12 (ENSPCOG00000026722) CLUL1 (ENSPCOG00000026641) TYMS (ENSPCOG00000023949) ENOSF1 (ENSPCOG00000016574) #7 ENSPCOG00000002353 #8 ADCYAP1 (ENSPCOG00000011810) #9 METTL4 (ENSPCOG00000020273) #12 NDC80 (ENSPCOG00000024438) #13 SMCHD1 (ENSPCOG00000028124) #15 EMILIN2 (ENSPCOG00000023410) #16 LPIN2 (ENSPCOG00000027455) #17 MYOM1 (ENSPCOG00000019999) #19 MYL12A (ENSPCOG00000018571) #20 MYL12B (ENSPCOG00000028244) #21 TGIF1 (ENSPCOG00000013428) #22 DLGAP1 (ENSPCOG00000025011) #23 AKAIN1 (ENSPCOG00000003655) #25 ZBTB14 (ENSPCOG00000027135) #26 EPB41L3 (ENSPCOG00000007637) #27 ENSPCOG00000014927 TMEM200C (ENSPCOG00000020142) ENSPCOG00000026051 ENSPCOG00000021962 ARHGAP28 (ENSPCOG00000018113) #28 LAMA1 (ENSPCOG00000010084) #30 Greater bamboo lemur MODERN SPECIES 325 FGF14 (ENSPSMG00000016444) TPP2 (ENSPSMG00000016375) METTL21C (ENSPSMG00000016235) TEX30 (ENSPSMG00000016225) POGLUT2 (ENSPSMG00000016189) ENSPSMG00000016130 METTL21EP (ENSPSMG00000016020) SLC10A2 (ENSPSMG00000016013) ENSPSMG00000015983 SMCHD1 (ENSPSMG00000015952) #15 EMILIN2 (ENSPSMG00000015903) #16 LPIN2 (ENSPSMG00000015874) #17 MYOM1 (ENSPSMG00000015775) #19 MYL12A (ENSPSMG00000015629) #20 ENSPSMG00000015612 #21 TGIF1 (ENSPSMG00000015580) #22 DLGAP1 (ENSPSMG00000015083) #23 ENSPSMG00000014669 ENSPSMG00000014657 AKAIN1 (ENSPSMG00000014644) #25 ZBTB14 (ENSPSMG00000014640) #26 EPB41L3 (ENSPSMG00000014474) #27 TMEM200C (ENSPSMG00000014145) Mouse lemur MODERN SPECIES 10 ENOSF1 (ENSMICG00000014847) #7 YES1 (ENSMICG00000028620) #8 ADCYAP1 (ENSMICG00000030488) #9 ENSMICG00000033941 ENSMICG00000033758 ENSMICG00000029575 METTL4 (ENSMICG00000037155) #12 NDC80 (ENSMICG00000008378) #13 SMCHD1 (ENSMICG00000012555) #15 ENSMICG00000036843 EMILIN2 (ENSMICG00000017574) #16 LPIN2 (ENSMICG00000017575) #17 MYOM1 (ENSMICG00000017883) #19 MYL12A (ENSMICG00000037011) #20 MYL12B (ENSMICG00000027780) #21 TGIF1 (ENSMICG00000029611) #22 DLGAP1 (ENSMICG00000001909) #23 AKAIN1 (ENSMICG00000034961) #25 ZBTB14 (ENSMICG00000034962) #26 EPB41L3 (ENSMICG00000015594) #27 TMEM200C (ENSMICG00000047300) L3MBTL4 (ENSMICG00000015626) ARHGAP28 (ENSMICG00000009879) #28 LAMA1 (ENSMICG00000007685) #30 ENSMICG00000031748 PTPRM (ENSMICG00000001715) #32 RAB12 (ENSMICG00000030661) #33 MTCL1 (ENSMICG00000002310) #34 ENSMICG00000037928 ENSMICG00000046653 NDUFV2 (ENSMICG00000038090) Bushbaby MODERN SPECIES 328 EMILIN2 (ENSOGAG00000024910) #16 LPIN2 (ENSOGAG00000001326) #17 MYOM1 (ENSOGAG00000001335) #19 MYL12A (ENSOGAG00000001340) #20 MYL12B (ENSOGAG00000029777) #21 TGIF1 (ENSOGAG00000030342) #22 DLGAP1 (ENSOGAG00000013126) #23 ENSOGAG00000027671 ENSOGAG00000013372 Haplorrhini ANCESTRAL SPECIES 25 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Simiiformes DUPLICATION Simiiformes ANCESTRAL SPECIES 24 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.`b ENSGT00940000154742.a Catarrhini ANCESTRAL SPECIES 23 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.`b Hominoidea ANCESTRAL SPECIES 24 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.`b Gibbon MODERN SPECIES 19 CLUL1 (ENSNLEG00000006850) ENSNLEG00000006854 ENOSF1 (ENSNLEG00000030293) #7 YES1 (ENSNLEG00000006863) #8 ADCYAP1 (ENSNLEG00000006864) #9 ENSNLEG00000029289 METTL4 (ENSNLEG00000006868) #12 NDC80 (ENSNLEG00000006870) #13 SMCHD1 (ENSNLEG00000006877) #15 EMILIN2 (ENSNLEG00000006882) #16 LPIN2 (ENSNLEG00000006886) #17 ENSNLEG00000032827 MYOM1 (ENSNLEG00000006889) #19 MYL12A (ENSNLEG00000026933) #20 MYL12B (ENSNLEG00000032335) #21 ENSNLEG00000028451 #22 DLGAP1 (ENSNLEG00000006910) #23 ENSNLEG00000035249 ENSNLEG00000006916 AKAIN1 (ENSNLEG00000028125) #25 ZBTB14 (ENSNLEG00000006918) #26 EPB41L3 (ENSNLEG00000006919) #27 TMEM200C (ENSNLEG00000006924) L3MBTL4 (ENSNLEG00000006925) ARHGAP28 (ENSNLEG00000006927) #28 LAMA1 (ENSNLEG00000006930) #30 LRRC30 (ENSNLEG00000018547) PTPRM (ENSNLEG00000006934) #32 ENSNLEG00000006939 #33 MTCL1 (ENSNLEG00000006940) #34 NDUFV2 (ENSNLEG00000006944) Hominidae ANCESTRAL SPECIES 24 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.ab Homo/Pan/Gorilla group ANCESTRAL SPECIES 26 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000155622.e.a.a ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Homo/Pan group ANCESTRAL SPECIES 25 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000155622.e.a.a ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Pan ANCESTRAL SPECIES 24 ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000154174.t ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000155622.e.a.a ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Chimpanzee MODERN SPECIES 9 TYMS (ENSPTRG00000009822) ENOSF1 (ENSPTRG00000009823) #7 YES1 (ENSPTRG00000009824) #8 ENSPTRG00000048401 ADCYAP1 (ENSPTRG00000009825) #9 ENSPTRG00000050092 METTL4 (ENSPTRG00000009828) #12 NDC80 (ENSPTRG00000009829) #13 SMCHD1 (ENSPTRG00000009831) #15 EMILIN2 (ENSPTRG00000009832) #16 ENSPTRG00000048371 LPIN2 (ENSPTRG00000009833) #17 MYOM1 (ENSPTRG00000009834) #19 MYL12A (ENSPTRG00000009835) #20 MYL12B (ENSPTRG00000009836) #21 TGIF1 (ENSPTRG00000009838) #22 ENSPTRG00000044604 DLGAP1 (ENSPTRG00000009839) #23 AKAIN1 (ENSPTRG00000052521) #25 ZBTB14 (ENSPTRG00000029352) #26 EPB41L3 (ENSPTRG00000009844) #27 TMEM200C (ENSPTRG00000029353) L3MBTL4 (ENSPTRG00000009845) ARHGAP28 (ENSPTRG00000009847) #28 ENSPTRG00000050179 LAMA1 (ENSPTRG00000009849) #30 LRRC30 (ENSPTRG00000029358) PTPRM (ENSPTRG00000009851) #32 RAB12 (ENSPTRG00000009853) #33 MTCL1 (ENSPTRG00000009854) #34 NDUFV2 (ENSPTRG00000009856) Bonobo MODERN SPECIES 9 CEP192 (ENSPPAG00000023155) ENSPPAG00000039572 YES1 (ENSPPAG00000038900) #8 ENSPPAG00000042949 ADCYAP1 (ENSPPAG00000031943) #9 ENSPPAG00000032374 METTL4 (ENSPPAG00000030467) #12 NDC80 (ENSPPAG00000041112) #13 SMCHD1 (ENSPPAG00000037346) #15 EMILIN2 (ENSPPAG00000026444) #16 ENSPPAG00000043766 LPIN2 (ENSPPAG00000036687) #17 MYOM1 (ENSPPAG00000037926) #19 MYL12A (ENSPPAG00000037395) #20 MYL12B (ENSPPAG00000016699) #21 ENSPPAG00000034209 #22 ENSPPAG00000036002 DLGAP1 (ENSPPAG00000032706) #23 ENSPPAG00000030574 #25 ZBTB14 (ENSPPAG00000023957) #26 EPB41L3 (ENSPPAG00000031576) #27 TMEM200C (ENSPPAG00000026280) ENSPPAG00000017617 ARHGAP28 (ENSPPAG00000027220) #28 ENSPPAG00000041462 LAMA1 (ENSPPAG00000031074) #30 ENSPPAG00000029118 LRRC30 (ENSPPAG00000032601) PTPRM (ENSPPAG00000022548) #32 ENSPPAG00000009152 #33 MTCL1 (ENSPPAG00000034933) #34 Human MODERN SPECIES 9 COLEC12 (ENSG00000158270) CETN1 (ENSG00000177143) CLUL1 (ENSG00000079101) TYMS (ENSG00000176890) ENOSF1 (ENSG00000132199) #7 YES1 (ENSG00000176105) #8 ADCYAP1 (ENSG00000141433) #9 METTL4 (ENSG00000101574) #12 NDC80 (ENSG00000080986) #13 SMCHD1 (ENSG00000101596) #15 EMILIN2 (ENSG00000132205) #16 LPIN2 (ENSG00000101577) #17 MYOM1 (ENSG00000101605) #19 MYL12A (ENSG00000101608) #20 MYL12B (ENSG00000118680) #21 TGIF1 (ENSG00000177426) #22 DLGAP1 (ENSG00000170579) #23 AKAIN1 (ENSG00000231824) #25 ZBTB14 (ENSG00000198081) #26 EPB41L3 (ENSG00000082397) #27 TMEM200C (ENSG00000206432) L3MBTL4 (ENSG00000154655) ARHGAP28 (ENSG00000088756) #28 LAMA1 (ENSG00000101680) #30 LRRC30 (ENSG00000206422) PTPRM (ENSG00000173482) #32 RAB12 (ENSG00000206418) #33 MTCL1 (ENSG00000168502) #34 NDUFV2 (ENSG00000178127) ANKRD12 (ENSG00000101745) TWSG1 (ENSG00000128791) Gorilla MODERN SPECIES 9 CLUL1 (ENSGGOG00000001325) TYMS (ENSGGOG00000014000) ENOSF1 (ENSGGOG00000009826) #7 YES1 (ENSGGOG00000000651) #8 ENSGGOG00000027261 ADCYAP1 (ENSGGOG00000036843) #9 ENSGGOG00000009010 METTL4 (ENSGGOG00000000937) #12 NDC80 (ENSGGOG00000000939) #13 SMCHD1 (ENSGGOG00000017005) #15 EMILIN2 (ENSGGOG00000000329) #16 LPIN2 (ENSGGOG00000000330) #17 MYOM1 (ENSGGOG00000044057) #19 MYL12A (ENSGGOG00000011429) #20 MYL12B (ENSGGOG00000004051) #21 ENSGGOG00000012694 #22 DLGAP1 (ENSGGOG00000034891) #23 AKAIN1 (ENSGGOG00000040105) #25 ZBTB14 (ENSGGOG00000024397) #26 EPB41L3 (ENSGGOG00000012450) #27 ENSGGOG00000026491 L3MBTL4 (ENSGGOG00000015056) ARHGAP28 (ENSGGOG00000000529) #28 ENSGGOG00000042094 LAMA1 (ENSGGOG00000016323) #30 ENSGGOG00000042265 LRRC30 (ENSGGOG00000028005) PTPRM (ENSGGOG00000003702) #32 ENSGGOG00000002654 #33 MTCL1 (ENSGGOG00000016277) #34 ENSGGOG00000028489 Orangutan MODERN SPECIES 9 CLUL1 (ENSPPYG00000009046) TYMS (ENSPPYG00000009045) ENOSF1 (ENSPPYG00000009044) #7 YES1 (ENSPPYG00000009043) #8 ADCYAP1 (ENSPPYG00000041262) #9 ENSPPYG00000032286 ENSPPYG00000009000 METTL4 (ENSPPYG00000009040) #12 NDC80 (ENSPPYG00000009039) #13 SMCHD1 (ENSPPYG00000009037) #15 ENSPPYG00000035335 LPIN2 (ENSPPYG00000009036) #17 MYOM1 (ENSPPYG00000009034) #19 MYL12A (ENSPPYG00000009033) #20 MYL12B (ENSPPYG00000009032) #21 ENSPPYG00000009030 #22 DLGAP1 (ENSPPYG00000009027) #23 AKAIN1 (ENSPPYG00000037539) #25 ZBTB14 (ENSPPYG00000009025) #26 EPB41L3 (ENSPPYG00000009024) #27 TMEM200C (ENSPPYG00000009023) L3MBTL4 (ENSPPYG00000009022) ARHGAP28 (ENSPPYG00000009021) #28 LAMA1 (ENSPPYG00000009019) #30 LRRC30 (ENSPPYG00000009018) PTPRM (ENSPPYG00000009016) #32 RAB12 (ENSPPYG00000009015) #33 MTCL1 (ENSPPYG00000009014) #34 NDUFV2 (ENSPPYG00000009013) ENSPPYG00000033372 ANKRD12 (ENSPPYG00000009012) Cercopithecidae ANCESTRAL SPECIES 25 ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00510000047760.y.b ENSGT00940000154920.i.b #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00910000148828 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00940000165227 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Cercopithecinae ANCESTRAL SPECIES 22 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00910000148828 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00940000165227 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Vervet Monkey MODERN SPECIES 9 COLEC12 (ENSCSAG00000017628) CETN1 (ENSCSAG00000018575) CLUL1 (ENSCSAG00000017625) TYMS (ENSCSAG00000017621) ENOSF1 (ENSCSAG00000017620) #7 YES1 (ENSCSAG00000017618) #8 ENSCSAG00000017615 #9 METTL4 (ENSCSAG00000017613) #12 NDC80 (ENSCSAG00000017610) #13 SMCHD1 (ENSCSAG00000017608) #15 EMILIN2 (ENSCSAG00000017605) #16 LPIN2 (ENSCSAG00000017604) #17 MYOM1 (ENSCSAG00000017602) #19 MYL12A (ENSCSAG00000017601) #20 MYL12B (ENSCSAG00000017599) #21 TGIF1 (ENSCSAG00000017597) #22 DLGAP1 (ENSCSAG00000017596) #23 ENSCSAG00000017594 AKAIN1 (ENSCSAG00000017591) #25 ZBTB14 (ENSCSAG00000017588) #26 EPB41L3 (ENSCSAG00000017587) #27 TMEM200C (ENSCSAG00000018576) L3MBTL4 (ENSCSAG00000017582) ARHGAP28 (ENSCSAG00000017578) #28 ENSCSAG00000017577 #30 ENSCSAG00000017573 #30 LRRC30 (ENSCSAG00000018577) PTPRM (ENSCSAG00000017571) #32 RAB12 (ENSCSAG00000017569) #33 MTCL1 (ENSCSAG00000017568) #34 NDUFV2 (ENSCSAG00000017564) Cercopithecinae_a ANCESTRAL SPECIES 21 ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT01030000234866 ENSGT00940000154982 #19 ENSGT00910000148828 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00940000165227 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Macaca ANCESTRAL SPECIES 22 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT01030000234866 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00940000165227 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Macaca_a ANCESTRAL SPECIES 21 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT01030000234866 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000155230.fd #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT01030000240171 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.ab ENSGT00940000154576.j Crab-eating macaque MODERN SPECIES 9 CLUL1 (ENSMFAG00000038811) TYMS (ENSMFAG00000039357) ENOSF1 (ENSMFAG00000031046) #7 YES1 (ENSMFAG00000003203) #8 ADCYAP1 (ENSMFAG00000050015) #9 ENSMFAG00000052217 METTL4 (ENSMFAG00000046183) #12 NDC80 (ENSMFAG00000001170) #13 SMCHD1 (ENSMFAG00000038628) #15 ENSMFAG00000056542 EMILIN2 (ENSMFAG00000037105) #16 LPIN2 (ENSMFAG00000038540) #17 ENSMFAG00000044192 MYOM1 (ENSMFAG00000041420) #19 MYL12A (ENSMFAG00000036992) #20 TGIF1 (ENSMFAG00000003221) #22 DLGAP1 (ENSMFAG00000031490) #23 ENSMFAG00000065343 AKAIN1 (ENSMFAG00000031861) #25 ENSMFAG00000057315 ZBTB14 (ENSMFAG00000031970) #26 EPB41L3 (ENSMFAG00000032905) #27 ENSMFAG00000052294 L3MBTL4 (ENSMFAG00000041924) ARHGAP28 (ENSMFAG00000003744) #28 LAMA1 (ENSMFAG00000007292) #30 LRRC30 (ENSMFAG00000028007) PTPRM (ENSMFAG00000002650) #32 ENSMFAG00000053616 RAB12 (ENSMFAG00000043551) #33 MTCL1 (ENSMFAG00000044143) #34 Rhesus MODERN SPECIES 9 YES1 (ENSMMUG00000004054) #8 ENSMMUG00000057387 ADCYAP1 (ENSMMUG00000062768) #9 ENSMMUG00000063067 METTL4 (ENSMMUG00000018950) #12 NDC80 (ENSMMUG00000018952) #13 ENSMMUG00000053753 SMCHD1 (ENSMMUG00000005461) #15 EMILIN2 (ENSMMUG00000017546) #16 LPIN2 (ENSMMUG00000017548) #17 ENSMMUG00000061540 MYOM1 (ENSMMUG00000019892) #19 MYL12B (ENSMMUG00000019893) ##21 ENSMMUG00000063593 ENSMMUG00000063768 TGIF1 (ENSMMUG00000005086) #22 DLGAP1 (ENSMMUG00000001471) #23 AKAIN1 (ENSMMUG00000059913) #25 ENSMMUG00000058439 ZBTB14 (ENSMMUG00000022005) #26 EPB41L3 (ENSMMUG00000019418) #27 TMEM200C (ENSMMUG00000055350) L3MBTL4 (ENSMMUG00000016302) ARHGAP28 (ENSMMUG00000014506) #28 ENSMMUG00000011408 #30 ENSMMUG00000062466 LRRC30 (ENSMMUG00000049108) PTPRM (ENSMMUG00000000768) #32 RAB12 (ENSMMUG00000062113) #33 MTCL1 (ENSMMUG00000015761) #34 NDUFV2 (ENSMMUG00000049556) Pig-tailed macaque MODERN SPECIES 554 METTL4 (ENSMNEG00000027723) #12 NDC80 (ENSMNEG00000031557) #13 SMCHD1 (ENSMNEG00000030716) #15 EMILIN2 (ENSMNEG00000032507) #16 LPIN2 (ENSMNEG00000035359) #17 ENSMNEG00000027836 MYOM1 (ENSMNEG00000029047) #19 MYL12A (ENSMNEG00000041223) #20 TGIF1 (ENSMNEG00000035101) #22 DLGAP1 (ENSMNEG00000036526) #23 ENSMNEG00000033878 ENSMNEG00000045453 AKAIN1 (ENSMNEG00000031689) #25 ZBTB14 (ENSMNEG00000040776) #26 EPB41L3 (ENSMNEG00000041544) #27 TMEM200C (ENSMNEG00000009357) L3MBTL4 (ENSMNEG00000036243) ARHGAP28 (ENSMNEG00000043678) #28 ENSMNEG00000002106 ENSMNEG00000044993 LAMA1 (ENSMNEG00000039096) #30 LRRC30 (ENSMNEG00000013340) PTPRM (ENSMNEG00000033386) #32 RAB12 (ENSMNEG00000040853) #33 Cercopithecinae_b ANCESTRAL SPECIES 25 ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT01030000234866 ENSGT00940000154982 #19 ENSGT00910000148828 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00940000165227 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00910000146973 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Olive baboon MODERN SPECIES 10 CLUL1 (ENSPANG00000023232) TYMS (ENSPANG00000016982) ENOSF1 (ENSPANG00000019754) #7 YES1 (ENSPANG00000005606) #8 ADCYAP1 (ENSPANG00000042268) #9 ENSPANG00000051273 METTL4 (ENSPANG00000021862) #12 NDC80 (ENSPANG00000003124) #13 SMCHD1 (ENSPANG00000021485) #15 EMILIN2 (ENSPANG00000003125) #16 ENSPANG00000041277 LPIN2 (ENSPANG00000010436) #17 MYOM1 (ENSPANG00000001638) #19 MYL12A (ENSPANG00000014852) #20 ENSPANG00000045052 ##21 TGIF1 (ENSPANG00000012318) #22 DLGAP1 (ENSPANG00000019969) #23 ENSPANG00000042694 AKAIN1 (ENSPANG00000009807) #25 ZBTB14 (ENSPANG00000003128) #26 EPB41L3 (ENSPANG00000006867) #27 TMEM200C (ENSPANG00000007851) L3MBTL4 (ENSPANG00000008894) ENSPANG00000044570 #28 ENSPANG00000019970 #30 LRRC30 (ENSPANG00000003355) PTPRM (ENSPANG00000005610) #32 RAB12 (ENSPANG00000009320) #33 MTCL1 (ENSPANG00000011897) #34 ENSPANG00000049362 ENSPANG00000009266 Cercopithecinae_d ANCESTRAL SPECIES 40 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920.j #8 ENSGT00510000047760.y.b ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00910000148828 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00940000165227 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a Drill MODERN SPECIES 1203 TYMS (ENSMLEG00000033083) ENOSF1 (ENSMLEG00000029800) #7 YES1 (ENSMLEG00000033031) #8 ENSMLEG00000038566 ADCYAP1 (ENSMLEG00000041063) #9 METTL4 (ENSMLEG00000036729) #12 NDC80 (ENSMLEG00000034205) #13 SMCHD1 (ENSMLEG00000042656) #15 EMILIN2 (ENSMLEG00000041789) #16 LPIN2 (ENSMLEG00000039895) #17 ENSMLEG00000039724 MYOM1 (ENSMLEG00000031580) #19 MYL12A (ENSMLEG00000027689) #20 MYL12B (ENSMLEG00000022144) #21 ENSMLEG00000033712 TGIF1 (ENSMLEG00000044111) #22 ENSMLEG00000021320 ENSMLEG00000034137 DLGAP1 (ENSMLEG00000033071) #23 ENSMLEG00000031857 AKAIN1 (ENSMLEG00000009942) #25 ZBTB14 (ENSMLEG00000033334) #26 EPB41L3 (ENSMLEG00000042882) #27 Sooty mangabey MODERN SPECIES 628 CLUL1 (ENSCATG00000045077) TYMS (ENSCATG00000030133) ENOSF1 (ENSCATG00000034332) #7 YES1 (ENSCATG00000036813) #8 ENSCATG00000029055 ADCYAP1 (ENSCATG00000039535) #9 METTL4 (ENSCATG00000011642) #12 NDC80 (ENSCATG00000030394) #13 SMCHD1 (ENSCATG00000042044) #15 EMILIN2 (ENSCATG00000032093) #16 LPIN2 (ENSCATG00000037884) #17 MYOM1 (ENSCATG00000018194) #19 ENSCATG00000041600 MYL12A (ENSCATG00000041341) #20 MYL12B (ENSCATG00000031984) #21 TGIF1 (ENSCATG00000000628) #22 DLGAP1 (ENSCATG00000017819) #23 ENSCATG00000030025 ENSCATG00000039667 AKAIN1 (ENSCATG00000023216) #25 ZBTB14 (ENSCATG00000038080) #26 EPB41L3 (ENSCATG00000035372) #27 ENSCATG00000019635 TMEM200C (ENSCATG00000020387) L3MBTL4 (ENSCATG00000035692) Rhinopithecus ANCESTRAL SPECIES 448 ENSGT01030000234606.a.a.a.a ENSGT00530000063596.B ENSGT00940000159481 ENSGT00940000159230 ENSGT00940000156092 ENSGT00940000157336 ENSGT00950000182843.a.a.a.a ENSGT00940000157393 ENSGT00390000004927 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd #22 Black snub-nosed monkey MODERN SPECIES 599 LPIN2 (ENSRBIG00000032868) #17 MYOM1 (ENSRBIG00000034307) #19 MYL12A (ENSRBIG00000003046) #20 MYL12B (ENSRBIG00000034511) #21 TGIF1 (ENSRBIG00000023893) #22 Golden snub-nosed monkey MODERN SPECIES 2831 METTL4 (ENSRROG00000032893) #12 NDC80 (ENSRROG00000040588) #13 SMCHD1 (ENSRROG00000036215) #15 EMILIN2 (ENSRROG00000043099) #16 LPIN2 (ENSRROG00000034072) #17 MYOM1 (ENSRROG00000032442) #19 ENSRROG00000029308 MYL12A (ENSRROG00000043381) #20 MYL12B (ENSRROG00000017363) #21 TGIF1 (ENSRROG00000036088) #22 DLGAP1 (ENSRROG00000033265) #23 ENSRROG00000038371 ENSRROG00000005640 ENSRROG00000035268 ENSRROG00000030024 Platyrrhini DUPLICATION Platyrrhini ANCESTRAL SPECIES 26 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.w ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd.a #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a.f #26 ENSGT00940000157047.i #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.`b ENSGT00940000154742.a ENSGT00390000007058 Cebidae ANCESTRAL SPECIES 28 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.w ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd.a #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a.f #26 ENSGT00940000157047.i #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.ab ENSGT00940000154742.a ENSGT00390000007058 Marmoset MODERN SPECIES 4 ADCYAP1 (ENSCJAG00000045833) #9 ENSCJAG00000045947 ENSCJAG00000062931 METTL4 (ENSCJAG00000000092) #12 NDC80 (ENSCJAG00000000078) #13 ENSCJAG00000000071 #15 ENSCJAG00000043001 ENSCJAG00000053051 ENSCJAG00000070355 EMILIN2 (ENSCJAG00000012955) #16 LPIN2 (ENSCJAG00000012946) #17 MYOM1 (ENSCJAG00000012917) #19 ENSCJAG00000012890 ##21 MYL12B (ENSCJAG00000080160) #21 ENSCJAG00000040414 ENSCJAG00000012865 #22 DLGAP1 (ENSCJAG00000012856) #23 ENSCJAG00000076723 ENSCJAG00000049819 #15 ENSCJAG00000080148 ENSCJAG00000080111 ENSCJAG00000064609 ENSCJAG00000085054 AKAIN1 (ENSCJAG00000042385) #25 ZBTB14 (ENSCJAG00000048541) #26 ENSCJAG00000015728 #27 ENSCJAG00000081743 ENSCJAG00000085204 TMEM200C (ENSCJAG00000038374) L3MBTL4 (ENSCJAG00000015716) ENSCJAG00000023104 Cebidae_a ANCESTRAL SPECIES 23 ENSGT00390000014786.w ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00940000165544 ENSGT00390000016237 #12 ENSGT00530000063169.b.b ENSGT00390000010218.e.b ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230.fd.a #22 ENSGT00910000148299 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a.f #26 ENSGT00940000157047.i #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.`b ENSGT00940000154742.a.o Capuchin MODERN SPECIES 41 METTL4 (ENSCCAG00000020235) #12 ENSCCAG00000033549 NDC80 (ENSCCAG00000032553) #13 SMCHD1 (ENSCCAG00000030527) #15 EMILIN2 (ENSCCAG00000029681) #16 LPIN2 (ENSCCAG00000035561) #17 MYOM1 (ENSCCAG00000022741) #19 MYL12A (ENSCCAG00000029033) #20 MYL12B (ENSCCAG00000013854) #21 TGIF1 (ENSCCAG00000027574) #22 HUNK (ENSCCAG00000028641) YPEL (ENSCCAG00000001926) MRAP (ENSCCAG00000037447) URB1 (ENSCCAG00000021299) EVA1C (ENSCCAG00000021119) CFAP298 (ENSCCAG00000027358) SYNJ1 (ENSCCAG00000020825) ENSCCAG00000022424 PAXBP1 (ENSCCAG00000020942) C21orf62 (ENSCCAG00000037763) OLIG2 (ENSCCAG00000024351) OLIG1 (ENSCCAG00000010149) IFNAR2 (ENSCCAG00000022451) IL10RB (ENSCCAG00000030174) IFNAR1 (ENSCCAG00000025224) Bolivian squirrel monkey MODERN SPECIES 53 COLEC12 (ENSSBOG00000030126) CLUL1 (ENSSBOG00000035239) TYMS (ENSSBOG00000021422) ENOSF1 (ENSSBOG00000035498) #7 YES1 (ENSSBOG00000034837) #8 ADCYAP1 (ENSSBOG00000028158) #9 ENSSBOG00000025141 METTL4 (ENSSBOG00000033623) #12 NDC80 (ENSSBOG00000035772) #13 SMCHD1 (ENSSBOG00000030266) #15 EMILIN2 (ENSSBOG00000029862) #16 LPIN2 (ENSSBOG00000026923) #17 MYOM1 (ENSSBOG00000036143) #19 MYL12A (ENSSBOG00000019169) #20 ENSSBOG00000022177 #21 TGIF1 (ENSSBOG00000036056) #22 DLGAP1 (ENSSBOG00000031193) #23 ENSSBOG00000031178 ENSSBOG00000035366 AKAIN1 (ENSSBOG00000031954) #25 ZBTB14 (ENSSBOG00000034371) #26 EPB41L3 (ENSSBOG00000024756) #27 ENSSBOG00000025802 TMEM200C (ENSSBOG00000034209) L3MBTL4 (ENSSBOG00000023649) ARHGAP28 (ENSSBOG00000031680) #28 ENSSBOG00000036132 LAMA1 (ENSSBOG00000033137) #30 ENSSBOG00000018693 LRRC30 (ENSSBOG00000009092) PTPRM (ENSSBOG00000035977) #32 Mas night monkey MODERN SPECIES 627 ENSANAG00000022662 METTL4 (ENSANAG00000028394) #12 ENSANAG00000022861 NDC80 (ENSANAG00000026423) #13 SMCHD1 (ENSANAG00000035458) #15 ENSANAG00000023466 EMILIN2 (ENSANAG00000033716) #16 LPIN2 (ENSANAG00000034006) #17 MYOM1 (ENSANAG00000023556) #19 ENSANAG00000019883 #20 MYL12B (ENSANAG00000028363) #21 ENSANAG00000029379 TGIF1 (ENSANAG00000020401) #22 ENSANAG00000037343 DLGAP1 (ENSANAG00000021635) #23 ENSANAG00000007877 AKAIN1 (ENSANAG00000025419) #25 ENSANAG00000035293 #26 EPB41L3 (ENSANAG00000020372) #27 ENSANAG00000035230 TMEM200C (ENSANAG00000023265) L3MBTL4 (ENSANAG00000025058) ARHGAP28 (ENSANAG00000036554) #28 LAMA1 (ENSANAG00000028013) #30 LRRC30 (ENSANAG00000020024) PTPRM (ENSANAG00000034856) #32 RAB12 (ENSANAG00000021061) #33 MTCL1 (ENSANAG00000014340) #34 Platyrrhini ANCESTRAL SPECIES ENSGT00940000155230.fd.b #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155230.fd.b #22 Marmoset MODERN SPECIES 1 GPR176 (ENSCJAG00000020926) FSIP1 (ENSCJAG00000020927) THBS1 (ENSCJAG00000020936) ENSCJAG00000077457 ENSCJAG00000075593 ENSCJAG00000068940 RASGRP1 (ENSCJAG00000020961) FAM98B (ENSCJAG00000069791) SPRED1 (ENSCJAG00000038730) TMCO5A (ENSCJAG00000020986) MEIS2 (ENSCJAG00000020992) CDIN1 (ENSCJAG00000021003) ENSCJAG00000074596 DPH6 (ENSCJAG00000021006) ENSCJAG00000023281 ENSCJAG00000061682 #22 ZNF770 (ENSCJAG00000021013) AQR (ENSCJAG00000021021) ACTC1 (ENSCJAG00000021047) GJD2 (ENSCJAG00000067910) ENSCJAG00000075351 ARHGAP11A (ENSCJAG00000021054) SCG5 (ENSCJAG00000021060) GREM1 (ENSCJAG00000073529) ENSCJAG00000084905 FMN1 (ENSCJAG00000021067) RYR3 (ENSCJAG00000035611) AVEN (ENSCJAG00000021101) CHRM5 (ENSCJAG00000023282) EMC7 (ENSCJAG00000021103) PGBD4 (ENSCJAG00000023283) Simiiformes ANCESTRAL SPECIES ENSGT00940000155230.gd #22 Catarrhini ANCESTRAL SPECIES ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 ENSGT00570000080851 Hominoidea ANCESTRAL SPECIES ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 ENSGT00570000080851 Gibbon MODERN SPECIES 7 ENSNLEG00000002792 ENSNLEG00000032967 GNG8 (ENSNLEG00000002788) PTGIR (ENSNLEG00000002780) CALM3 (ENSNLEG00000002752) ENSNLEG00000002751 PNMA8B (ENSNLEG00000002750) PNMA8A (ENSNLEG00000002749) PNMA8C (ENSNLEG00000030454) ENSNLEG00000030898 ENSNLEG00000002747 PPP5C (ENSNLEG00000002629) HIF3A (ENSNLEG00000002481) IGFL1 (ENSNLEG00000002458) ENSNLEG00000002443 ENSNLEG00000032323 #22 IGFL3 (ENSNLEG00000002440) IGFL4 (ENSNLEG00000002438) PGLYRP1 (ENSNLEG00000002422) CCDC61 (ENSNLEG00000002402) ENSNLEG00000002399 MYPOP (ENSNLEG00000002401) IRF2BP1 (ENSNLEG00000018408) FOXA3 (ENSNLEG00000002392) SYMPK (ENSNLEG00000002369) RSPH6A (ENSNLEG00000002328) DMWD (ENSNLEG00000002321) DMPK (ENSNLEG00000002298) ENSNLEG00000002295 MEIOSIN (ENSNLEG00000002294) ENSNLEG00000031904 Hominidae ANCESTRAL SPECIES ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 ENSGT00570000080851 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 ENSGT00570000080851 Homo/Pan group ANCESTRAL SPECIES ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 ENSGT00570000080851 Pan ANCESTRAL SPECIES 9 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT00940000166143.A.a.b.b.b.b.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785.j ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 ENSGT00570000080851 Bonobo MODERN SPECIES 10 STRN4 (ENSPPAG00000035898) PRKD2 (ENSPPAG00000037267) ENSPPAG00000041113 GNG8 (ENSPPAG00000033557) PTGIR (ENSPPAG00000041949) CALM3 (ENSPPAG00000037613) ENSPPAG00000035628 PNMA8B (ENSPPAG00000042091) PNMA8A (ENSPPAG00000033527) PNMA8C (ENSPPAG00000008304) CCDC8 (ENSPPAG00000042195) PPP5C (ENSPPAG00000038591) HIF3A (ENSPPAG00000042427) ENSPPAG00000032796 IGFL2 (ENSPPAG00000029197) ENSPPAG00000029552 #22 IGFL3 (ENSPPAG00000022284) IGFL4 (ENSPPAG00000040782) PGLYRP1 (ENSPPAG00000039034) ENSPPAG00000030915 ENSPPAG00000035049 NANOS2 (ENSPPAG00000020568) MYPOP (ENSPPAG00000017638) FOXA3 (ENSPPAG00000042745) SYMPK (ENSPPAG00000043204) RSPH6A (ENSPPAG00000043932) DMWD (ENSPPAG00000037733) DMPK (ENSPPAG00000043247) ENSPPAG00000037802 MEIOSIN (ENSPPAG00000042669) FBXO46 (ENSPPAG00000022797) Chimpanzee MODERN SPECIES 10 STRN4 (ENSPTRG00000011192) PRKD2 (ENSPTRG00000011190) DACT3 (ENSPTRG00000028961) GNG8 (ENSPTRG00000043557) PTGIR (ENSPTRG00000011186) CALM3 (ENSPTRG00000011185) PPP5D1 (ENSPTRG00000039811) ENSPTRG00000028962 PNMA8A (ENSPTRG00000011183) PNMA8C (ENSPTRG00000048654) CCDC8 (ENSPTRG00000011182) PPP5C (ENSPTRG00000011181) HIF3A (ENSPTRG00000011180) IGFL1 (ENSPTRG00000011179) IGFL2 (ENSPTRG00000041643) ENSPTRG00000050670 #22 IGFL3 (ENSPTRG00000011176) IGFL4 (ENSPTRG00000051124) PGLYRP1 (ENSPTRG00000011175) CCDC61 (ENSPTRG00000039834) NOVA2 (ENSPTRG00000011173) NANOS2 (ENSPTRG00000011172) MYPOP (ENSPTRG00000028972) IRF2BP1 (ENSPTRG00000011171) FOXA3 (ENSPTRG00000011170) SYMPK (ENSPTRG00000011169) RSPH6A (ENSPTRG00000011168) DMWD (ENSPTRG00000011165) DMPK (ENSPTRG00000011166) SIX5 (ENSPTRG00000033681) MEIOSIN (ENSPTRG00000041781) Gorilla MODERN SPECIES 10 FKRP (ENSGGOG00000043279) STRN4 (ENSGGOG00000010169) PRKD2 (ENSGGOG00000010508) ENSGGOG00000043507 PTGIR (ENSGGOG00000013112) CALM3 (ENSGGOG00000000212) ENSGGOG00000024504 ENSGGOG00000015668 PNMA8A (ENSGGOG00000001214) PNMA8C (ENSGGOG00000040172) CCDC8 (ENSGGOG00000016630) PPP5C (ENSGGOG00000007562) HIF3A (ENSGGOG00000007551) IGFL1 (ENSGGOG00000011461) IGFL2 (ENSGGOG00000024074) ENSGGOG00000028458 #22 IGFL3 (ENSGGOG00000005560) IGFL4 (ENSGGOG00000027623) PGLYRP1 (ENSGGOG00000011126) ENSGGOG00000011115 NOVA2 (ENSGGOG00000000325) NANOS2 (ENSGGOG00000013447) MYPOP (ENSGGOG00000017080) IRF2BP1 (ENSGGOG00000023972) FOXA3 (ENSGGOG00000003972) SYMPK (ENSGGOG00000003410) RSPH6A (ENSGGOG00000003405) DMWD (ENSGGOG00000007982) DMPK (ENSGGOG00000007967) SIX5 (ENSGGOG00000007958) BHMG1 (ENSGGOG00000036840) Orangutan MODERN SPECIES 10 SLC1A5 (ENSPPYG00000010161) FKRP (ENSPPYG00000010160) STRN4 (ENSPPYG00000010159) PRKD2 (ENSPPYG00000010158) DACT3 (ENSPPYG00000010157) PTGIR (ENSPPYG00000010155) CALM3 (ENSPPYG00000010154) ENSPPYG00000031172 PNMA8B (ENSPPYG00000010152) PNMA8A (ENSPPYG00000035419) PNMA8C (ENSPPYG00000037781) CCDC8 (ENSPPYG00000010150) PPP5C (ENSPPYG00000010148) HIF3A (ENSPPYG00000010147) IGFL1 (ENSPPYG00000040323) ENSPPYG00000040668 #22 IGFL3 (ENSPPYG00000010144) ENSPPYG00000029912 IGFL4 (ENSPPYG00000010142) PGLYRP1 (ENSPPYG00000010141) CCDC61 (ENSPPYG00000010140) NOVA2 (ENSPPYG00000010139) NANOS2 (ENSPPYG00000010138) ENSPPYG00000031914 IRF2BP1 (ENSPPYG00000010136) FOXA3 (ENSPPYG00000010580) SYMPK (ENSPPYG00000010135) RSPH6A (ENSPPYG00000010134) DMWD (ENSPPYG00000010133) DMPK (ENSPPYG00000010132) SIX5 (ENSPPYG00000010131) Cercopithecidae ANCESTRAL SPECIES 12 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 Rhinopithecus ANCESTRAL SPECIES 16 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.B.f ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT00390000015797.c.b.d ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00390000009557.A.b ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 Golden snub-nosed monkey MODERN SPECIES 2027 FKRP (ENSRROG00000007497) STRN4 (ENSRROG00000042099) PRKD2 (ENSRROG00000034944) DACT3 (ENSRROG00000044269) ENSRROG00000045208 PTGIR (ENSRROG00000035701) CALM3 (ENSRROG00000033594) ENSRROG00000035990 PNMA8A (ENSRROG00000013610) PNMA8C (ENSRROG00000027253) ENSRROG00000038440 PPP5C (ENSRROG00000027318) HIF3A (ENSRROG00000032780) IGFL1 (ENSRROG00000029689) IGFL2 (ENSRROG00000012003) ENSRROG00000045549 #22 IGFL3 (ENSRROG00000039749) ENSRROG00000043631 IGFL4 (ENSRROG00000043261) PGLYRP1 (ENSRROG00000035762) CCDC61 (ENSRROG00000032654) NOVA2 (ENSRROG00000037399) NANOS2 (ENSRROG00000014903) MYPOP (ENSRROG00000031078) IRF2BP1 (ENSRROG00000024812) FOXA3 (ENSRROG00000041934) SYMPK (ENSRROG00000024834) RSPH6A (ENSRROG00000038540) DMWD (ENSRROG00000036990) DMPK (ENSRROG00000037325) SIX5 (ENSRROG00000026145) Black snub-nosed monkey MODERN SPECIES 477 SLC1A5 (ENSRBIG00000032793) STRN4 (ENSRBIG00000030977) PRKD2 (ENSRBIG00000002509) ENSRBIG00000037645 GNG8 (ENSRBIG00000040120) PTGIR (ENSRBIG00000039814) ENSRBIG00000040350 PNMA8B (ENSRBIG00000043852) PNMA8A (ENSRBIG00000032652) PNMA8C (ENSRBIG00000007752) ENSRBIG00000041650 PPP5C (ENSRBIG00000043486) HIF3A (ENSRBIG00000037340) IGFL1 (ENSRBIG00000041594) IGFL2 (ENSRBIG00000013672) ENSRBIG00000037692 #22 ENSRBIG00000041617 ENSRBIG00000026369 IGFL4 (ENSRBIG00000017354) PGLYRP1 (ENSRBIG00000041217) CCDC61 (ENSRBIG00000027796) NANOS2 (ENSRBIG00000023726) MYPOP (ENSRBIG00000035669) IRF2BP1 (ENSRBIG00000025631) FOXA3 (ENSRBIG00000037992) SYMPK (ENSRBIG00000040963) RSPH6A (ENSRBIG00000044850) DMWD (ENSRBIG00000038254) DMPK (ENSRBIG00000033839) SIX5 (ENSRBIG00000013549) MEIOSIN (ENSRBIG00000043746) Cercopithecinae ANCESTRAL SPECIES 1 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 Cercopithecinae_a ANCESTRAL SPECIES 3 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 Cercopithecinae_b ANCESTRAL SPECIES 23 ENSGT00940000159485 ENSGT00390000017583 ENSGT00950000183095.a.b.a.b.a ENSGT00950000183024.a.b.b ENSGT00950000183181.B.b ENSGT01100000263497.D ENSGT01050000244902.b.d ENSGT00950000182980.a.b.a.a.a ENSGT01030000234522.C.b.f.b.b ENSGT01030000234522.C.b.f.b.a ENSGT01030000234522.C.b.e.b.a.a.b ENSGT01030000234522.C.b.f.a ENSGT00940000158785 ENSGT00940000161745 ENSGT00390000009557.C ENSGT00940000155230.gd #22 ENSGT00390000009557.A.a ENSGT00390000017625.d ENSGT00390000009557.B ENSGT00940000161006 ENSGT00940000154133.B ENSGT00940000161740 ENSGT00950000183135.A.a ENSGT00450000040421 ENSGT00940000162120 ENSGT00940000162453 ENSGT00390000017045 ENSGT00500000044869.a.b ENSGT00390000007686.a ENSGT00940000162019 ENSGT00940000162237 Olive baboon MODERN SPECIES 12 STRN4 (ENSPANG00000017664) PRKD2 (ENSPANG00000008367) DACT3 (ENSPANG00000021672) GNG8 (ENSPANG00000029260) PTGIR (ENSPANG00000019287) ENSPANG00000015474 PNMA8B (ENSPANG00000039504) PNMA8A (ENSPANG00000018286) PNMA8C (ENSPANG00000033741) CCDC8 (ENSPANG00000020252) ENSPANG00000029483 PPP5C (ENSPANG00000002966) HIF3A (ENSPANG00000014598) ENSPANG00000044504 ENSPANG00000039314 ENSPANG00000038110 #22 IGFL3 (ENSPANG00000019926) PGLYRP1 (ENSPANG00000048485) CCDC61 (ENSPANG00000009365) NOVA2 (ENSPANG00000023868) NANOS2 (ENSPANG00000009327) MYPOP (ENSPANG00000046784) IRF2BP1 (ENSPANG00000002641) FOXA3 (ENSPANG00000034535) SYMPK (ENSPANG00000019930) RSPH6A (ENSPANG00000011597) DMWD (ENSPANG00000001288) DMPK (ENSPANG00000002664) SIX5 (ENSPANG00000005316) MEIOSIN (ENSPANG00000018287) FBXO46 (ENSPANG00000002640) Platyrrhini ANCESTRAL SPECIES ENSGT00940000155230.gd #22 Cebidae ANCESTRAL SPECIES ENSGT00940000155230.gd #22 Marmoset MODERN SPECIES 17 TNFSF12 (ENSCJAG00000039733) TNFSF13 (ENSCJAG00000032369) SENP3 (ENSCJAG00000015137) EIF4A1 (ENSCJAG00000015114) CD68 (ENSCJAG00000048079) MPDU1 (ENSCJAG00000015095) SOX15 (ENSCJAG00000007951) FXR2 (ENSCJAG00000015063) SAT2 (ENSCJAG00000015055) SHBG (ENSCJAG00000015035) ATP1B2 (ENSCJAG00000015019) TP53 (ENSCJAG00000014978) WRAP53 (ENSCJAG00000014965) EFNB3 (ENSCJAG00000044444) DNAH2 (ENSCJAG00000014881) ENSCJAG00000084720 #22 KDM6B (ENSCJAG00000014850) TMEM88 (ENSCJAG00000083328) NAA38 (ENSCJAG00000014843) CYB5D1 (ENSCJAG00000014841) CHD3 (ENSCJAG00000014766) RNF227 (ENSCJAG00000041018) KCNAB3 (ENSCJAG00000014760) TRAPPC1 (ENSCJAG00000072023) CNTROB (ENSCJAG00000014727) GUCY2D (ENSCJAG00000014688) ALOX12B (ENSCJAG00000014652) ALOXE3 (ENSCJAG00000014599) HES7 (ENSCJAG00000014589) PER1 (ENSCJAG00000014556) VAMP2 (ENSCJAG00000014540) Tarsier DUPLICATION Tarsier MODERN SPECIES 796 ENSTSYG00000034680 #22 Tarsier DUPLICATION Tarsier MODERN SPECIES 7337 METTL4 (ENSTSYG00000005777) #12 NDC80 (ENSTSYG00000005807) #13 SMCHD1 (ENSTSYG00000005460) #15 ENSTSYG00000026320 EMILIN2 (ENSTSYG00000003553) #16 LPIN2 (ENSTSYG00000012231) #17 MYOM1 (ENSTSYG00000005623) #19 ENSTSYG00000030971 #20 MYL12B (ENSTSYG00000005569) #21 ENSTSYG00000037506 TGIF1 (ENSTSYG00000008982) #22 Tarsier MODERN SPECIES 5801 RNF19A (ENSTSYG00000029101) SPAG1 (ENSTSYG00000000424) POLR2K (ENSTSYG00000003640) FBXO43 (ENSTSYG00000008181) RGS22 (ENSTSYG00000008139) ENSTSYG00000000843 ENSTSYG00000029453 #22 VPS13B (ENSTSYG00000002291) Laurasiatheria ANCESTRAL SPECIES 23 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Eulipotyphla ANCESTRAL SPECIES 1865 ENSGT00940000155230 #22 ENSGT00940000156220 #23 Hedgehog MODERN SPECIES 9477 TGIF1 (ENSEEUG00000004881) #22 Common shrew MODERN SPECIES 5585 TGIF1 (ENSSARG00000002819) #22 DLGAP1 (ENSSARG00000002827) #23 Laurasiatheria_a ANCESTRAL SPECIES 13 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Artiodactyla ANCESTRAL SPECIES 17 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Suina ANCESTRAL SPECIES 40 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Pig MODERN SPECIES 14 TYMS (ENSSSCG00000040678) ENOSF1 (ENSSSCG00000027169) #7 YES1 (ENSSSCG00000031942) #8 ENSSSCG00000040699 ADCYAP1 (ENSSSCG00000035186) #9 ENSSSCG00000059038 METTL4 (ENSSSCG00000034816) #12 ENSSSCG00000020888 NDC80 (ENSSSCG00000003697) #13 SMCHD1 (ENSSSCG00000029030) #15 EMILIN2 (ENSSSCG00000003694) #16 LPIN2 (ENSSSCG00000038494) #17 MYOM1 (ENSSSCG00000003693) #19 ENSSSCG00000003691 #20 MYL12B (ENSSSCG00000058470) #21 TGIF1 (ENSSSCG00000024174) #22 DLGAP1 (ENSSSCG00000003690) #23 AKAIN1 (ENSSSCG00000056207) #25 ZBTB14 (ENSSSCG00000033032) #26 ENSSSCG00000036800 EPB41L3 (ENSSSCG00000003687) #27 ENSSSCG00000054462 TMEM200C (ENSSSCG00000039627) ARHGAP28 (ENSSSCG00000021612) #28 LAMA1 (ENSSSCG00000034767) #30 ENSSSCG00000023672 PTPRM (ENSSSCG00000028805) #32 RAB12 (ENSSSCG00000038026) #33 MTCL1 (ENSSSCG00000003684) #34 NDUFV2 (ENSSSCG00000038826) ANKRD12 (ENSSSCG00000003682) Chacoan peccary MODERN SPECIES 862 THOC1 (ENSCWAG00000006881) COLEC12 (ENSCWAG00000006994) CETN1 (ENSCWAG00000007027) CLUL1 (ENSCWAG00000007055) TYMS (ENSCWAG00000007139) ENOSF1 (ENSCWAG00000007242) #7 YES1 (ENSCWAG00000007475) #8 ADCYAP1 (ENSCWAG00000007502) #9 METTL4 (ENSCWAG00000007542) #12 NDC80 (ENSCWAG00000007581) #13 SMCHD1 (ENSCWAG00000007610) #15 EMILIN2 (ENSCWAG00000007714) #16 LPIN2 (ENSCWAG00000007732) #17 MYOM1 (ENSCWAG00000007790) #19 MYL12A (ENSCWAG00000008049) #20 TGIF1 (ENSCWAG00000008192) #22 DLGAP1 (ENSCWAG00000008322) #23 AKAIN1 (ENSCWAG00000010892) #25 ENSCWAG00000010946 ZBTB14 (ENSCWAG00000011021) #26 EPB41L3 (ENSCWAG00000011105) #27 TMEM200C (ENSCWAG00000012298) ARHGAP28 (ENSCWAG00000012324) #28 LAMA1 (ENSCWAG00000012485) #30 LRRC30 (ENSCWAG00000012566) PTPRM (ENSCWAG00000012594) #32 RAB12 (ENSCWAG00000012826) #33 MTCL1 (ENSCWAG00000012924) #34 NDUFV2 (ENSCWAG00000012959) ANKRD12 (ENSCWAG00000013063) TWSG1 (ENSCWAG00000013144) Artiodactyla_a ANCESTRAL SPECIES 17 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Artiodactyla_b ANCESTRAL SPECIES 10 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Cetacea ANCESTRAL SPECIES 11 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01010000224919 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00390000016972.a.a.b.b.a ENSGT00950000182982.A #34 ENSGT00390000017580.bb ENSGT00940000154742.a Odontoceti ANCESTRAL SPECIES 10 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000001347.v.o.b.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01010000224919 ENSGT00550000074618.a.b.`b ENSGT00560000078638 #25 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00390000016972.a.a.b.b.a Odontoceti_a ANCESTRAL SPECIES 9 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000001347.v.o.b.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01010000224919 ENSGT00560000078638 #25 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000164030 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.bb Dolphin MODERN SPECIES 3139 METTL4 (ENSTTRG00000008249) #12 NDC80 (ENSTTRG00000008256) #13 ENSTTRG00000008267 #15 ENSTTRG00000008276 #15 EMILIN2 (ENSTTRG00000008298) #16 LPIN2 (ENSTTRG00000008304) #17 MYOM1 (ENSTTRG00000008310) #19 MYL12A (ENSTTRG00000008319) #20 MYL12B (ENSTTRG00000008322) #21 TGIF1 (ENSTTRG00000008324) #22 Odontoceti_b ANCESTRAL SPECIES 10 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000001347.v.o.b.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01010000224919 ENSGT00560000078638 #25 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT01090000260119.g ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 Monodontidae ANCESTRAL SPECIES 8 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000001347.v.o.b.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01010000224919 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT01090000260119.g ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00950000182891.a.a.b.a.b.a.i Narwhal MODERN SPECIES 295 CETN1 (ENSMMNG00015003008) ENSMMNG00015003019 CLUL1 (ENSMMNG00015003042) TYMS (ENSMMNG00015003074) ENOSF1 (ENSMMNG00015003115) #7 YES1 (ENSMMNG00015003176) #8 ADCYAP1 (ENSMMNG00015003197) #9 ENSMMNG00015003209 METTL4 (ENSMMNG00015003242) #12 NDC80 (ENSMMNG00015003275) #13 SMCHD1 (ENSMMNG00015003318) #15 EMILIN2 (ENSMMNG00015003399) #16 LPIN2 (ENSMMNG00015003446) #17 MYOM1 (ENSMMNG00015003548) #19 MYL12A (ENSMMNG00015003634) #20 TGIF1 (ENSMMNG00015003660) #22 DLGAP1 (ENSMMNG00015003747) #23 ENSMMNG00015003903 ENSMMNG00015003912 ENSMMNG00015003932 ENSMMNG00015003955 ENSMMNG00015003965 ZBTB14 (ENSMMNG00015003972) #26 EPB41L3 (ENSMMNG00015004048) #27 TMEM200C (ENSMMNG00015004206) L3MBTL4 (ENSMMNG00015004217) ARHGAP28 (ENSMMNG00015004258) #28 LAMA1 (ENSMMNG00015004339) #30 ENSMMNG00015004377 LRRC30 (ENSMMNG00015004392) PTPRM (ENSMMNG00015004419) #32 Beluga whale MODERN SPECIES 60 METTL4 (ENSDLEG00000015259) #12 NDC80 (ENSDLEG00000015314) #13 SMCHD1 (ENSDLEG00000015395) #15 EMILIN2 (ENSDLEG00000015862) #16 LPIN2 (ENSDLEG00000015907) #17 MYOM1 (ENSDLEG00000016123) #19 MYL12B (ENSDLEG00000016178) #20 TGIF1 (ENSDLEG00000016192) #22 DLGAP1 (ENSDLEG00000016208) #23 ENSDLEG00000016252 ENSDLEG00000016260 ENSDLEG00000016274 ENSDLEG00000016292 ZBTB14 (ENSDLEG00000016304) #26 EPB41L3 (ENSDLEG00000016342) #27 L3MBTL4 (ENSDLEG00000016582) ARHGAP28 (ENSDLEG00000016628) #28 LAMA1 (ENSDLEG00000016968) #30 ENSDLEG00000018830 LRRC30 (ENSDLEG00000018835) PTPRM (ENSDLEG00000018839) #32 RAB12 (ENSDLEG00000018863) #33 MTCL1 (ENSDLEG00000018871) #34 Vaquita MODERN SPECIES 5 CLUL1 (ENSPSNG00000012188) TYMS (ENSPSNG00000012361) ENOSF1 (ENSPSNG00000012510) #7 YES1 (ENSPSNG00000009957) #8 ADCYAP1 (ENSPSNG00000010057) #9 ENSPSNG00000010128 METTL4 (ENSPSNG00000010163) #12 NDC80 (ENSPSNG00000010241) #13 SMCHD1 (ENSPSNG00000010317) #15 EMILIN2 (ENSPSNG00000010385) #16 LPIN2 (ENSPSNG00000010441) #17 MYOM1 (ENSPSNG00000010586) #19 ENSPSNG00000010695 MYL12A (ENSPSNG00000010765) #20 ENSPSNG00000010881 TGIF1 (ENSPSNG00000010898) #22 DLGAP1 (ENSPSNG00000011076) #23 ENSPSNG00000012311 ENSPSNG00000012349 ENSPSNG00000012382 ENSPSNG00000012425 AKAIN1 (ENSPSNG00000012463) #25 ENSPSNG00000012501 ZBTB14 (ENSPSNG00000012511) #26 EPB41L3 (ENSPSNG00000012785) #27 TMEM200C (ENSPSNG00000014585) L3MBTL4 (ENSPSNG00000014623) ARHGAP28 (ENSPSNG00000015095) #28 LAMA1 (ENSPSNG00000016083) #30 ENSPSNG00000016720 LRRC30 (ENSPSNG00000016795) Sperm whale MODERN SPECIES 10 CETN1 (ENSPCTG00005018754) CLUL1 (ENSPCTG00005018544) TYMS (ENSPCTG00005018401) ENOSF1 (ENSPCTG00005017789) #7 YES1 (ENSPCTG00005017702) #8 ADCYAP1 (ENSPCTG00005017646) #9 ENSPCTG00005017589 ENSPCTG00005017559 METTL4 (ENSPCTG00005017412) #12 NDC80 (ENSPCTG00005017125) #13 SMCHD1 (ENSPCTG00005016939) #15 EMILIN2 (ENSPCTG00005016847) #16 LPIN2 (ENSPCTG00005016430) #17 MYOM1 (ENSPCTG00005016147) #19 MYL12A (ENSPCTG00005015983) #20 TGIF1 (ENSPCTG00005015886) #22 DLGAP1 (ENSPCTG00005014046) #23 ENSPCTG00005013911 ENSPCTG00005013869 AKAIN1 (ENSPCTG00005013812) #25 ENSPCTG00005013791 ZBTB14 (ENSPCTG00005013701) #26 EPB41L3 (ENSPCTG00005013615) #27 TMEM200C (ENSPCTG00005013590) L3MBTL4 (ENSPCTG00005012962) ARHGAP28 (ENSPCTG00005012161) #28 LAMA1 (ENSPCTG00005010960) #30 LRRC30 (ENSPCTG00005010734) ENSPCTG00005010629 PTPRM (ENSPCTG00005009359) #32 RAB12 (ENSPCTG00005009191) #33 Blue whale MODERN SPECIES 5 CETN1 (ENSBMSG00010012744) ENSBMSG00010012735 CLUL1 (ENSBMSG00010012683) ENSBMSG00010012644 ENOSF1 (ENSBMSG00010012605) #7 YES1 (ENSBMSG00010012578) #8 ADCYAP1 (ENSBMSG00010012565) #9 METTL4 (ENSBMSG00010012557) #12 NDC80 (ENSBMSG00010012545) #13 SMCHD1 (ENSBMSG00010012525) #15 EMILIN2 (ENSBMSG00010012492) #16 LPIN2 (ENSBMSG00010012467) #17 ENSBMSG00010012448 MYOM1 (ENSBMSG00010012336) #19 MYL12A (ENSBMSG00010012284) #20 TGIF1 (ENSBMSG00010012268) #22 ENSBMSG00010012252 DLGAP1 (ENSBMSG00010012009) #23 ENSBMSG00010011936 ENSBMSG00010011932 ENSBMSG00010011908 ENSBMSG00010011894 AKAIN1 (ENSBMSG00010011889) #25 ENSBMSG00010011884 EPB41L3 (ENSBMSG00010011724) #27 TMEM200C (ENSBMSG00010011652) L3MBTL4 (ENSBMSG00010011632) ARHGAP28 (ENSBMSG00010011506) #28 ENSBMSG00010011459 LAMA1 (ENSBMSG00010011398) #30 LRRC30 (ENSBMSG00010011359) Pecora ANCESTRAL SPECIES 26 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Percora_a ANCESTRAL SPECIES 28 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Bovidae ANCESTRAL SPECIES 28 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.fb.a ENSGT00940000154742.a ENSGT00390000007058 Bovinae ANCESTRAL SPECIES 28 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220.i #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.fb.a ENSGT00940000154742.a ENSGT00390000007058 Bos ANCESTRAL SPECIES 29 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.s ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220.i #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT01100000263481.n.a.a.a.b.a.a.a.a.b.a.b.b.a.b.b ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.fb.a ENSGT00940000154742.a ENSGT00390000007058 Bos_a ANCESTRAL SPECIES 28 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.s ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000155230 #22 ENSGT00940000156220.i #23 ENSGT01050000245099 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.q #32 ENSGT01100000263481.n.a.a.a.b.a.a.a.a.b.a.b.b.a.b.b ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.fb.a ENSGT00940000154742.a ENSGT00390000007058 Wild yak MODERN SPECIES 583 METTL4 (ENSBMUG00000001809) #12 NDC80 (ENSBMUG00000001772) #13 SMCHD1 (ENSBMUG00000001733) #15 EMILIN2 (ENSBMUG00000001647) #16 LPIN2 (ENSBMUG00000001563) #17 MYOM1 (ENSBMUG00000001469) #19 MYL12A (ENSBMUG00000001371) #20 TGIF1 (ENSBMUG00000001305) #22 DLGAP1 (ENSBMUG00000001028) #23 Domestic yak MODERN SPECIES 13 CETN1 (ENSBGRG00000019384) CLUL1 (ENSBGRG00000019406) ENSBGRG00000019538 ENOSF1 (ENSBGRG00000019894) #7 YES1 (ENSBGRG00000020429) #8 ADCYAP1 (ENSBGRG00000020763) #9 METTL4 (ENSBGRG00000020859) #12 NDC80 (ENSBGRG00000021015) #13 SMCHD1 (ENSBGRG00000021081) #15 ENSBGRG00000021468 EMILIN2 (ENSBGRG00000021481) #16 LPIN2 (ENSBGRG00000021549) #17 MYOM1 (ENSBGRG00000022019) #19 MYL12A (ENSBGRG00000022681) #20 ENSBGRG00000022793 TGIF1 (ENSBGRG00000022806) #22 DLGAP1 (ENSBGRG00000022857) #23 ENSBGRG00000023385 ZBTB14 (ENSBGRG00000023412) #26 EPB41L3 (ENSBGRG00000023492) #27 ENSBGRG00000023895 ARHGAP28 (ENSBGRG00000023924) #28 LAMA1 (ENSBGRG00000024286) #30 LRRC30 (ENSBGRG00000024420) PTPRM (ENSBGRG00000024466) #32 ENSBGRG00000024579 RAB12 (ENSBGRG00000024618) #33 MTCL1 (ENSBGRG00000024711) #34 NDUFV2 (ENSBGRG00000024870) ANKRD12 (ENSBGRG00000024894) TWSG1 (ENSBGRG00000024927) Bos_b ANCESTRAL SPECIES 34 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786.s ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220.i #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000155020 #32 ENSGT01100000263481.n.a.a.a.b.a.a.a.a.b.a.b.b.a.b.b ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.fb.a ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Hybrid Bos Indicus MODERN SPECIES 16 CETN1 (ENSBIXG00005001842) CLUL1 (ENSBIXG00005014105) TYMS (ENSBIXG00005001829) ENOSF1 (ENSBIXG00005014007) #7 YES1 (ENSBIXG00005013763) #8 ADCYAP1 (ENSBIXG00005013724) #9 ENSBIXG00005013699 METTL4 (ENSBIXG00005013634) #12 NDC80 (ENSBIXG00005007711) #13 SMCHD1 (ENSBIXG00005013581) #15 EMILIN2 (ENSBIXG00005013554) #16 LPIN2 (ENSBIXG00005013528) #17 MYOM1 (ENSBIXG00005013491) #19 MYL12A (ENSBIXG00005013437) #20 MYL12B (ENSBIXG00005007006) #21 TGIF1 (ENSBIXG00005006727) #22 DLGAP1 (ENSBIXG00005013290) #23 AKAIN1 (ENSBIXG00005012720) #25 ZBTB14 (ENSBIXG00005012690) #26 EPB41L3 (ENSBIXG00005012607) #27 ENSBIXG00005012473 TMEM200C (ENSBIXG00005005828) ARHGAP28 (ENSBIXG00005012393) #28 LAMA1 (ENSBIXG00005011945) #30 PTPRM (ENSBIXG00005011755) #32 ENSBIXG00005006785 RAB12 (ENSBIXG00005011412) #33 MTCL1 (ENSBIXG00005011362) #34 ENSBIXG00005011194 ANKRD12 (ENSBIXG00005007098) TWSG1 (ENSBIXG00005001011) Cow MODERN SPECIES 16 COLEC12 (ENSBTAG00000007705) CETN1 (ENSBTAG00000012320) CLUL1 (ENSBTAG00000014012) TYMS (ENSBTAG00000007003) ENOSF1 (ENSBTAG00000007000) #7 YES1 (ENSBTAG00000001523) #8 ADCYAP1 (ENSBTAG00000020650) #9 METTL4 (ENSBTAG00000021668) #12 NDC80 (ENSBTAG00000021673) #13 SMCHD1 (ENSBTAG00000003354) #15 EMILIN2 (ENSBTAG00000003880) #16 LPIN2 (ENSBTAG00000012060) #17 MYOM1 (ENSBTAG00000019585) #19 MYL12A (ENSBTAG00000016024) #20 MYL12B (ENSBTAG00000026266) #21 TGIF1 (ENSBTAG00000007718) #22 DLGAP1 (ENSBTAG00000005372) #23 ENSBTAG00000053533 ZBTB14 (ENSBTAG00000038970) #26 EPB41L3 (ENSBTAG00000019251) #27 TMEM200C (ENSBTAG00000046396) ARHGAP28 (ENSBTAG00000019036) #28 LAMA1 (ENSBTAG00000018160) #30 LRRC30 (ENSBTAG00000046046) ENSBTAG00000048323 PTPRM (ENSBTAG00000024015) #32 RAB12 (ENSBTAG00000010356) #33 MTCL1 (ENSBTAG00000009459) #34 NDUFV2 (ENSBTAG00000004871) ANKRD12 (ENSBTAG00000002755) TWSG1 (ENSBTAG00000001805) American bison MODERN SPECIES 2731 METTL4 (ENSBBBG00000015068) #12 NDC80 (ENSBBBG00000000795) #13 SMCHD1 (ENSBBBG00000003527) #15 EMILIN2 (ENSBBBG00000015217) #16 LPIN2 (ENSBBBG00000015266) #17 ENSBBBG00000015278 MYOM1 (ENSBBBG00000015361) #19 MYL12A (ENSBBBG00000015416) #20 MYL12B (ENSBBBG00000015444) #21 TGIF1 (ENSBBBG00000015487) #22 ENSBBBG00000015493 ENSBBBG00000015722 #23 Caprinae ANCESTRAL SPECIES 25 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000164030 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580.fb.a ENSGT00940000154742.a ENSGT00390000007058 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 15 COLEC12 (ENSOARG00020008142) CETN1 (ENSOARG00020008212) CLUL1 (ENSOARG00020008252) TYMS (ENSOARG00020008409) ENOSF1 (ENSOARG00020008665) #7 YES1 (ENSOARG00020009131) #8 ADCYAP1 (ENSOARG00020009231) #9 ENSOARG00020009340 METTL4 (ENSOARG00020009416) #12 NDC80 (ENSOARG00020009483) #13 SMCHD1 (ENSOARG00020009606) #15 LPIN2 (ENSOARG00020010928) #17 MYOM1 (ENSOARG00020011271) #19 MRCL3 (ENSOARG00020012194) #20 MYL12B (ENSOARG00020012316) #21 tgif1 (ENSOARG00020012393) #22 DLGAP1 (ENSOARG00020012505) #23 ENSOARG00020015037 AKAIN1 (ENSOARG00020015062) #25 ZBTB14 (ENSOARG00020015102) #26 EPB41L3 (ENSOARG00020015184) #27 TMEM200C (ENSOARG00020016296) ENSOARG00020016325 ARHGAP28 (ENSOARG00020016377) #28 LRRC30 (ENSOARG00020017349) PTPRM (ENSOARG00020017409) #32 RAB12 (ENSOARG00020018846) #33 MTCL1 (ENSOARG00020018971) #34 NDUFV2 (ENSOARG00020019449) ANKRD12 (ENSOARG00020019571) TWSG1 (ENSOARG00020019693) Rambouillet Sheep MODERN SPECIES 9 ARHGAP5 (ENSOARG00020005438) ENSOARG00020005406 NUBPL (ENSOARG00020005362) GPR33 (ENSOARG00020005349) DTD2 (ENSOARG00020005329) HEATR5A (ENSOARG00020005213) HECTD1 (ENSOARG00020005016) AP4S1 (ENSOARG00020004957) STRN3 (ENSOARG00020004854) COCH (ENSOARG00020004770) SCFD1 (ENSOARG00020004656) G2E3 (ENSOARG00020004595) PRKD1 (ENSOARG00020004370) FOXG1 (ENSOARG00020004300) NOVA1 (ENSOARG00020004244) ENSOARG00020004201 #22 ENSOARG00020004189 ENSOARG00020004153 ENSOARG00020003828 ENSOARG00020003470 ENSOARG00020003394 ENSOARG00020003344 ENSOARG00020024767 ENSOARG00020024729 ENSOARG00020024695 MCP-3 (ENSOARG00020024598) ENSOARG00020024554 ENSOARG00020024498 LOXL1 (ENSOARG00020024474) STOML1 (ENSOARG00020024379) ISLR2 (ENSOARG00020024266) Goat MODERN SPECIES 16 CLUL1 (ENSCHIG00000012461) TYMS (ENSCHIG00000000075) ENOSF1 (ENSCHIG00000000109) #7 YES1 (ENSCHIG00000000143) #8 ENSCHIG00000000177 ADCYAP1 (ENSCHIG00000000212) #9 METTL4 (ENSCHIG00000000254) #12 NDC80 (ENSCHIG00000000360) #13 SMCHD1 (ENSCHIG00000000392) #15 EMILIN2 (ENSCHIG00000000425) #16 ENSCHIG00000000471 LPIN2 (ENSCHIG00000010140) #17 MYOM1 (ENSCHIG00000014135) #19 MYL12A (ENSCHIG00000016398) #20 MYL12B (ENSCHIG00000009461) #21 TGIF1 (ENSCHIG00000011164) #22 DLGAP1 (ENSCHIG00000017982) #23 ZBTB14 (ENSCHIG00000004440) #26 EPB41L3 (ENSCHIG00000023908) #27 TMEM200C (ENSCHIG00000004586) ARHGAP28 (ENSCHIG00000022452) #28 ENSCHIG00000005295 #30 ENSCHIG00000010759 PTPRM (ENSCHIG00000015240) #32 RAB12 (ENSCHIG00000016103) #33 MTCL1 (ENSCHIG00000023205) #34 ENSCHIG00000015681 ENSCHIG00000013412 ENSCHIG00000007393 TWSG1 (ENSCHIG00000026440) RALBP1 (ENSCHIG00000015737) Siberian musk deer MODERN SPECIES 132 METTL4 (ENSMMSG00000009203) #12 ENSMMSG00000009166 NDC80 (ENSMMSG00000009103) #13 SMCHD1 (ENSMMSG00000008985) #15 EMILIN2 (ENSMMSG00000008939) #16 LPIN2 (ENSMMSG00000008712) #17 MYOM1 (ENSMMSG00000016741) #19 MYL12A (ENSMMSG00000016648) #20 TGIF1 (ENSMMSG00000016578) #22 ENSMMSG00000016560 DLGAP1 (ENSMMSG00000015330) #23 ENSMMSG00000015226 AKAIN1 (ENSMMSG00000015213) #25 ZBTB14 (ENSMMSG00000015196) #26 EPB41L3 (ENSMMSG00000015156) #27 TMEM200C (ENSMMSG00000015145) ARHGAP28 (ENSMMSG00000014590) #28 LAMA1 (ENSMMSG00000014407) #30 LRRC30 (ENSMMSG00000014378) PTPRM (ENSMMSG00000014281) #32 ENSMMSG00000014263 ENSMMSG00000014253 RAB12 (ENSMMSG00000014211) #33 MTCL1 (ENSMMSG00000014119) #34 Yarkand deer MODERN SPECIES 19 CLUL1 (ENSCHYG00000017782) TYMS (ENSCHYG00000017585) ENOSF1 (ENSCHYG00000016711) #7 YES1 (ENSCHYG00000016589) #8 ADCYAP1 (ENSCHYG00000016541) #9 ENSCHYG00000016472 METTL4 (ENSCHYG00000016298) #12 NDC80 (ENSCHYG00000016070) #13 SMCHD1 (ENSCHYG00000015325) #15 EMILIN2 (ENSCHYG00000015216) #16 ENSCHYG00000014880 #17 ENSCHYG00000014825 MYOM1 (ENSCHYG00000014067) #19 ENSCHYG00000026009 #20 MYL12B (ENSCHYG00000025995) #21 TGIF1 (ENSCHYG00000025940) #22 DLGAP1 (ENSCHYG00000025662) #23 ENSCHYG00000025600 ENSCHYG00000025583 ENSCHYG00000025565 AKAIN1 (ENSCHYG00000025549) #25 ZBTB14 (ENSCHYG00000025527) #26 ENSCHYG00000025521 EPB41L3 (ENSCHYG00000024994) #27 ARHGAP28 (ENSCHYG00000024509) #28 LAMA1 (ENSCHYG00000024245) #30 LRRC30 (ENSCHYG00000024222) PTPRM (ENSCHYG00000023397) #32 RAB12 (ENSCHYG00000023329) #33 MTCL1 (ENSCHYG00000023220) #34 ENSCHYG00000023192 Camelidae ANCESTRAL SPECIES 84 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000164030 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Arabian camel MODERN SPECIES 16 USP14 (ENSCDRG00005020182) THOC1 (ENSCDRG00005020293) COLEC12 (ENSCDRG00005020320) CLUL1 (ENSCDRG00005020348) ENSCDRG00005020370 ENOSF1 (ENSCDRG00005020452) #7 YES1 (ENSCDRG00005020509) #8 ADCYAP1 (ENSCDRG00005020536) #9 METTL4 (ENSCDRG00005020546) #12 NDC80 (ENSCDRG00005008870) #13 SMCHD1 (ENSCDRG00005009045) #15 EMILIN2 (ENSCDRG00005009377) #16 LPIN2 (ENSCDRG00005009560) #17 MYOM1 (ENSCDRG00005009826) #19 MYL12A (ENSCDRG00005010206) #20 TGIF1 (ENSCDRG00005010359) #22 DLGAP1 (ENSCDRG00005010492) #23 AKAIN1 (ENSCDRG00005012508) #25 ZBTB14 (ENSCDRG00005012548) #26 EPB41L3 (ENSCDRG00005012623) #27 L3MBTL4 (ENSCDRG00005013404) ARHGAP28 (ENSCDRG00005013537) #28 LAMA1 (ENSCDRG00005013670) #30 ENSCDRG00005014205 PTPRM (ENSCDRG00005014275) #32 RAB12 (ENSCDRG00005015408) #33 MTCL1 (ENSCDRG00005015473) #34 NDUFV2 (ENSCDRG00005015516) ANKRD12 (ENSCDRG00005015595) TWSG1 (ENSCDRG00005015713) RALBP1 (ENSCDRG00005015768) Alpaca MODERN SPECIES 3255 LPIN2 (ENSVPAG00000001900) #17 MYOM1 (ENSVPAG00000001904) #19 ENSVPAG00000001908 #20 MYL12A (ENSVPAG00000001909) #20 ENSVPAG00000001910 #22 ENSVPAG00000001911 #23 Laurasiatheria_b ANCESTRAL SPECIES 13 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Carnivora ANCESTRAL SPECIES 13 ENSGT00940000173400 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Felidae ANCESTRAL SPECIES 24 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016988.a.a.a.a.a.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00900000143817 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Panthera ANCESTRAL SPECIES 24 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016988.a.a.a.a.a.b ENSGT00730000110997.k.a ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Tiger MODERN SPECIES 304 ENSPTIG00000011880 METTL4 (ENSPTIG00000010967) #12 NDC80 (ENSPTIG00000009398) #13 SMCHD1 (ENSPTIG00000008728) #15 EMILIN2 (ENSPTIG00000006880) #16 LPIN2 (ENSPTIG00000005321) #17 MYOM1 (ENSPTIG00000019775) #19 MYL12A (ENSPTIG00000019252) #20 MYL12B (ENSPTIG00000018527) #21 TGIF1 (ENSPTIG00000016983) #22 DLGAP1 (ENSPTIG00000010258) #23 AKAIN1 (ENSPTIG00000009523) #25 ZBTB14 (ENSPTIG00000009023) #26 EPB41L3 (ENSPTIG00000018818) #27 L3MBTL4 (ENSPTIG00000017321) ARHGAP28 (ENSPTIG00000014723) #28 Panthera_a ANCESTRAL SPECIES 26 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016988.a.a.a.a.a.b ENSGT00730000110997.k.a ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 leopard MODERN SPECIES 74 ENOSF1 (ENSPPRG00000013866) #7 YES1 (ENSPPRG00000012940) #8 ADCYAP1 (ENSPPRG00000012367) #9 ENSPPRG00000012194 ENSPPRG00000012063 ENSPPRG00000010967 METTL4 (ENSPPRG00000010770) #12 NDC80 (ENSPPRG00000010568) #13 SMCHD1 (ENSPPRG00000009812) #15 EMILIN2 (ENSPPRG00000008241) #16 LPIN2 (ENSPPRG00000008144) #17 MYOM1 (ENSPPRG00000007760) #19 MYL12A (ENSPPRG00000005441) #20 MYL12B (ENSPPRG00000005198) #21 ENSPPRG00000005105 TGIF1 (ENSPPRG00000005045) #22 DLGAP1 (ENSPPRG00000004760) #23 AKAIN1 (ENSPPRG00000004032) #25 ZBTB14 (ENSPPRG00000003993) #26 EPB41L3 (ENSPPRG00000003607) #27 L3MBTL4 (ENSPPRG00000002728) ARHGAP28 (ENSPPRG00000001666) #28 LAMA1 (ENSPPRG00000023072) #30 LRRC30 (ENSPPRG00000020824) PTPRM (ENSPPRG00000023610) #32 RAB12 (ENSPPRG00000024521) #33 MTCL1 (ENSPPRG00000024571) #34 NDUFV2 (ENSPPRG00000019611) ANKRD12 (ENSPPRG00000018986) TWSG1 (ENSPPRG00000018563) RALBP1 (ENSPPRG00000018300) lion MODERN SPECIES 12 CETN1 (ENSPLOG00000017316) CLUL1 (ENSPLOG00000017176) TYMS (ENSPLOG00000017051) ENOSF1 (ENSPLOG00000016798) #7 YES1 (ENSPLOG00000016606) #8 ADCYAP1 (ENSPLOG00000016557) #9 ENSPLOG00000016509 METTL4 (ENSPLOG00000016387) #12 NDC80 (ENSPLOG00000016248) #13 ENSPLOG00000016223 SMCHD1 (ENSPLOG00000015887) #15 EMILIN2 (ENSPLOG00000015733) #16 LPIN2 (ENSPLOG00000015556) #17 MYOM1 (ENSPLOG00000015128) #19 MYL12A (ENSPLOG00000014986) #20 TGIF1 (ENSPLOG00000014893) #22 DLGAP1 (ENSPLOG00000013859) #23 ENSPLOG00000013749 AKAIN1 (ENSPLOG00000013714) #25 ZBTB14 (ENSPLOG00000013682) #26 EPB41L3 (ENSPLOG00000012964) #27 TMEM200C (ENSPLOG00000012856) L3MBTL4 (ENSPLOG00000012623) ARHGAP28 (ENSPLOG00000012502) #28 LAMA1 (ENSPLOG00000011989) #30 LRRC30 (ENSPLOG00000011938) PTPRM (ENSPLOG00000011634) #32 RAB12 (ENSPLOG00000011564) #33 MTCL1 (ENSPLOG00000011328) #34 ENSPLOG00000011275 NDUFV2 (ENSPLOG00000011256) Cat MODERN SPECIES 243 CETN1 (ENSFCAG00000009226) CLUL1 (ENSFCAG00000009228) TYMS (ENSFCAG00000009230) ENOSF1 (ENSFCAG00000009233) #7 YES1 (ENSFCAG00000009235) #8 ADCYAP1 (ENSFCAG00000039710) #9 ENSFCAG00000032982 ENSFCAG00000039848 METTL4 (ENSFCAG00000019392) #12 NDC80 (ENSFCAG00000030389) #13 SMCHD1 (ENSFCAG00000029639) #15 EMILIN2 (ENSFCAG00000027624) #16 LPIN2 (ENSFCAG00000027974) #17 MYOM1 (ENSFCAG00000001020) #19 MYL12A (ENSFCAG00000022871) #20 TGIF1 (ENSFCAG00000029898) #22 ENSFCAG00000047431 DLGAP1 (ENSFCAG00000011418) #23 AKAIN1 (ENSFCAG00000041689) #25 ZBTB14 (ENSFCAG00000023573) #26 EPB41L3 (ENSFCAG00000011079) #27 TMEM200C (ENSFCAG00000043742) L3MBTL4 (ENSFCAG00000031842) ARHGAP28 (ENSFCAG00000015368) #28 LAMA1 (ENSFCAG00000008650) #30 LRRC30 (ENSFCAG00000003109) PTPRM (ENSFCAG00000013023) #32 RAB12 (ENSFCAG00000027710) #33 MTCL1 (ENSFCAG00000005803) #34 NDUFV2 (ENSFCAG00000036877) ANKRD12 (ENSFCAG00000043867) Caniformia ANCESTRAL SPECIES 9 ENSGT00940000173400 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Caniformia_b ANCESTRAL SPECIES 25 ENSGT00940000173400 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Mustelinae ANCESTRAL SPECIES 5 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Ferret MODERN SPECIES 170 CLUL1 (ENSMPUG00000005429) TYMS (ENSMPUG00000005419) ENOSF1 (ENSMPUG00000005407) #7 YES1 (ENSMPUG00000005394) #8 ADCYAP1 (ENSMPUG00000005386) #9 ENSMPUG00000019883 METTL4 (ENSMPUG00000005375) #12 NDC80 (ENSMPUG00000005356) #13 SMCHD1 (ENSMPUG00000005190) #15 EMILIN2 (ENSMPUG00000005128) #16 LPIN2 (ENSMPUG00000005110) #17 MYOM1 (ENSMPUG00000005090) #19 MYL12A (ENSMPUG00000005057) #20 ENSMPUG00000005055 MYL12B (ENSMPUG00000005011) #21 TGIF1 (ENSMPUG00000005004) #22 DLGAP1 (ENSMPUG00000004995) #23 ZBTB14 (ENSMPUG00000004990) #26 EPB41L3 (ENSMPUG00000004981) #27 ENSMPUG00000019882 L3MBTL4 (ENSMPUG00000004964) ENSMPUG00000004959 ENSMPUG00000004930 ARHGAP28 (ENSMPUG00000004917) #28 LAMA1 (ENSMPUG00000004879) #30 LRRC30 (ENSMPUG00000019881) PTPRM (ENSMPUG00000004846) #32 RAB12 (ENSMPUG00000004836) #33 ENSMPUG00000004833 ENSMPUG00000004794 MTCL1 (ENSMPUG00000004784) #34 American mink MODERN SPECIES 31 ENSNVIG00000011735 ENSNVIG00000011724 METTL4 (ENSNVIG00000011683) #12 NDC80 (ENSNVIG00000011663) #13 SMCHD1 (ENSNVIG00000011639) #15 EMILIN2 (ENSNVIG00000011628) #16 LPIN2 (ENSNVIG00000011608) #17 MYOM1 (ENSNVIG00000011397) #19 MYL12A (ENSNVIG00000011359) #20 MYL12B (ENSNVIG00000011345) #21 TGIF1 (ENSNVIG00000011316) #22 DLGAP1 (ENSNVIG00000011137) #23 ENSNVIG00000011129 AKAIN1 (ENSNVIG00000011118) #25 ZBTB14 (ENSNVIG00000011093) #26 EPB41L3 (ENSNVIG00000010941) #27 L3MBTL4 (ENSNVIG00000010862) ARHGAP28 (ENSNVIG00000010825) #28 LAMA1 (ENSNVIG00000010722) #30 LRRC30 (ENSNVIG00000010703) PTPRM (ENSNVIG00000010512) #32 RAB12 (ENSNVIG00000010489) #33 MTCL1 (ENSNVIG00000010451) #34 NDUFV2 (ENSNVIG00000010419) ANKRD12 (ENSNVIG00000010366) TWSG1 (ENSNVIG00000010343) Ursidae ANCESTRAL SPECIES 23 ENSGT00940000173400 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Ursus ANCESTRAL SPECIES 25 ENSGT00940000173400 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 American black bear DUPLICATION American black bear MODERN SPECIES 9323 ENSUAMG00000002428 #22 American black bear MODERN SPECIES 9361 ENSUAMG00000002687 #22 Polar bear MODERN SPECIES 96 CETN1 (ENSUMAG00000019682) CLUL1 (ENSUMAG00000019680) TYMS (ENSUMAG00000019677) ENOSF1 (ENSUMAG00000019674) #7 YES1 (ENSUMAG00000019673) #8 ENSUMAG00000019669 ADCYAP1 (ENSUMAG00000019664) #9 METTL4 (ENSUMAG00000019651) #12 NDC80 (ENSUMAG00000019602) #13 SMCHD1 (ENSUMAG00000019575) #15 EMILIN2 (ENSUMAG00000019556) #16 LPIN2 (ENSUMAG00000019544) #17 MYOM1 (ENSUMAG00000019140) #19 MYL12A (ENSUMAG00000019097) #20 MYL12B (ENSUMAG00000019096) #21 TGIF1 (ENSUMAG00000019091) #22 DLGAP1 (ENSUMAG00000018976) #23 AKAIN1 (ENSUMAG00000018955) #25 ZBTB14 (ENSUMAG00000018942) #26 EPB41L3 (ENSUMAG00000018925) #27 L3MBTL4 (ENSUMAG00000018879) ARHGAP28 (ENSUMAG00000018815) #28 LAMA1 (ENSUMAG00000018773) #30 LRRC30 (ENSUMAG00000018751) PTPRM (ENSUMAG00000018739) #32 ENSUMAG00000018727 #33 MTCL1 (ENSUMAG00000018721) #34 NDUFV2 (ENSUMAG00000018713) ANKRD12 (ENSUMAG00000018698) TWSG1 (ENSUMAG00000018695) RALBP1 (ENSUMAG00000018688) Giant Panda MODERN SPECIES 5 CETN1 (ENSAMEG00000019837) CLUL1 (ENSAMEG00000006626) ENSAMEG00000025934 TYMS (ENSAMEG00000006607) ENOSF1 (ENSAMEG00000006581) #7 YES1 (ENSAMEG00000006544) #8 ADCYAP1 (ENSAMEG00000006537) #9 METTL4 (ENSAMEG00000010116) #12 NDC80 (ENSAMEG00000010069) #13 SMCHD1 (ENSAMEG00000010022) #15 EMILIN2 (ENSAMEG00000009998) #16 LPIN2 (ENSAMEG00000009951) #17 MYOM1 (ENSAMEG00000010570) #19 MYL12A (ENSAMEG00000026960) #20 MYL12B (ENSAMEG00000028707) #21 TGIF1 (ENSAMEG00000012674) #22 DLGAP1 (ENSAMEG00000012677) #23 AKAIN1 (ENSAMEG00000020013) #25 ZBTB14 (ENSAMEG00000020014) #26 EPB41L3 (ENSAMEG00000000602) #27 L3MBTL4 (ENSAMEG00000006857) ARHGAP28 (ENSAMEG00000006845) #28 LAMA1 (ENSAMEG00000007475) #30 LRRC30 (ENSAMEG00000018805) PTPRM (ENSAMEG00000007456) #32 RAB12 (ENSAMEG00000007452) #33 MTCL1 (ENSAMEG00000007437) #34 NDUFV2 (ENSAMEG00000007415) ANKRD12 (ENSAMEG00000007392) TWSG1 (ENSAMEG00000028641) ENSAMEG00000007499 Canidae ANCESTRAL SPECIES 1 ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016292.i.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Red fox MODERN SPECIES 55 ENSVVUG00000006975 METTL4 (ENSVVUG00000006988) #12 NDC80 (ENSVVUG00000007016) #13 ENSVVUG00000007254 SMCHD1 (ENSVVUG00000007320) #15 EMILIN2 (ENSVVUG00000008678) #16 LPIN2 (ENSVVUG00000008689) #17 MYOM1 (ENSVVUG00000008791) #19 ENSVVUG00000009225 #20 MYL12B (ENSVVUG00000009238) #21 TGIF1 (ENSVVUG00000009272) #22 DLGAP1 (ENSVVUG00000009317) #23 ZBTB14 (ENSVVUG00000010107) #26 EPB41L3 (ENSVVUG00000010125) #27 ENSVVUG00000010208 L3MBTL4 (ENSVVUG00000010230) ARHGAP28 (ENSVVUG00000010346) #28 ENSVVUG00000010487 LAMA1 (ENSVVUG00000010548) #30 ENSVVUG00000011552 LRRC30 (ENSVVUG00000011556) PTPRM (ENSVVUG00000011599) #32 RAB12 (ENSVVUG00000011748) #33 MTCL1 (ENSVVUG00000011763) #34 NDUFV2 (ENSVVUG00000011795) ANKRD12 (ENSVVUG00000011805) Canis_lupus ANCESTRAL SPECIES 4 ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016292.i.b ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155458.pc ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Dog MODERN SPECIES 35 ENOSF1 (ENSCAFG00845002065) #7 YES1 (ENSCAFG00845002202) #8 ADCYAP1 (ENSCAFG00845002272) #9 ENSCAFG00845002314 ENSCAFG00845002328 ENSCAFG00845002349 METTL4 (ENSCAFG00845002376) #12 NDC80 (ENSCAFG00845002475) #13 SMCHD1 (ENSCAFG00845002514) #15 EMILIN2 (ENSCAFG00845002641) #16 LPIN2 (ENSCAFG00845002673) #17 MYOM1 (ENSCAFG00845002811) #19 ENSCAFG00845002989 #20 MYL12B (ENSCAFG00845003004) #21 ENSCAFG00845003014 TGIF1 (ENSCAFG00845003025) #22 DLGAP1 (ENSCAFG00845003202) #23 AKAIN1 (ENSCAFG00845003415) #25 ZBTB14 (ENSCAFG00845003431) #26 EPB41L3 (ENSCAFG00845003573) #27 TMEM200C (ENSCAFG00845003836) L3MBTL4 (ENSCAFG00845003867) ARHGAP28 (ENSCAFG00845003916) #28 ENSCAFG00845003930 LAMA1 (ENSCAFG00845004002) #30 ENSCAFG00845004087 LRRC30 (ENSCAFG00845004098) PTPRM (ENSCAFG00845004181) #32 RAB12 (ENSCAFG00845004291) #33 MTCL1 (ENSCAFG00845004330) #34 ENSCAFG00845004451 Dingo DUPLICATION Dingo MODERN SPECIES 271 YES1 (ENSCAFG00020018034) #8 ADCYAP1 (ENSCAFG00020020268) #9 ENSCAFG00020020280 ENSCAFG00020020296 ENSCAFG00020020307 ENSCAFG00020020312 METTL4 (ENSCAFG00020020313) #12 NDC80 (ENSCAFG00020020317) #13 SMCHD1 (ENSCAFG00020020366) #15 EMILIN2 (ENSCAFG00020020531) #16 LPIN2 (ENSCAFG00020020533) #17 MYOM1 (ENSCAFG00020020583) #19 ENSCAFG00020020906 #20 MYL12B (ENSCAFG00020020908) #21 ENSCAFG00020020914 TGIF1 (ENSCAFG00020020919) #22 DLGAP1 (ENSCAFG00020020947) #23 ENSCAFG00020021056 ENSCAFG00020021066 ZBTB14 (ENSCAFG00020021068) #26 ENSCAFG00020021069 EPB41L3 (ENSCAFG00020021170) #27 L3MBTL4 (ENSCAFG00020022524) ENSCAFG00020022527 ENSCAFG00020022528 ENSCAFG00020022530 #28 ENSCAFG00020022531 #30 ENSCAFG00020022535 #30 ENSCAFG00020022536 LRRC30 (ENSCAFG00020022537) PTPRM (ENSCAFG00020022563) #32 Dingo DUPLICATION Dingo MODERN SPECIES 343 ENSCAFG00020005571 RBM12 (ENSCAFG00020005650) NFS1 (ENSCAFG00020005653) ROMO1 (ENSCAFG00020005664) ENSCAFG00020005671 RBM39 (ENSCAFG00020005676) PHF20 (ENSCAFG00020005691) SCAND1 (ENSCAFG00020005777) ENSCAFG00020005787 EPB41L1 (ENSCAFG00020005807) AAR2 (ENSCAFG00020005856) ENSCAFG00020005862 ENSCAFG00020005865 ENSCAFG00020005870 ENSCAFG00020005874 ENSCAFG00020005881 #22 RAB5IF (ENSCAFG00020005885) SLA2 (ENSCAFG00020005890) ENSCAFG00020005893 DSN1 (ENSCAFG00020005917) SOGA1 (ENSCAFG00020005922) ##34 ENSCAFG00020005973 TLDC2 (ENSCAFG00020005977) SAMHD1 (ENSCAFG00020006094) RBL1 (ENSCAFG00020012391) ENSCAFG00020012444 ENSCAFG00020012473 RPN2 (ENSCAFG00020012479) GHRH (ENSCAFG00020012483) ##9 MANBAL (ENSCAFG00020012487) SRC (ENSCAFG00020012489) Dingo MODERN SPECIES 401 ENSCAFG00020005120 LRTM1 (ENSCAFG00020005138) ENSCAFG00020005144 ENSCAFG00020005180 WNT5A (ENSCAFG00020005184) ERC2 (ENSCAFG00020005226) CCDC66 (ENSCAFG00020005515) TASOR (ENSCAFG00020005538) ARHGEF3 (ENSCAFG00020005760) IL17RD (ENSCAFG00020005794) HESX1 (ENSCAFG00020005831) ENSCAFG00020005837 APPL1 (ENSCAFG00020005864) ASB14 (ENSCAFG00020006536) DNAH12 (ENSCAFG00020006557) ENSCAFG00020006685 #22 PDE12 (ENSCAFG00020006692) ARF4 (ENSCAFG00020006698) DENND6A (ENSCAFG00020006723) SLMAP (ENSCAFG00020007038) FLNB (ENSCAFG00020008260) ENSCAFG00020010019 DNASE1L3 (ENSCAFG00020010119) ABHD6 (ENSCAFG00020010122) RPP14 (ENSCAFG00020010128) HTD2 (ENSCAFG00020010130) PXK (ENSCAFG00020010131) PDHB (ENSCAFG00020010134) KCTD6 (ENSCAFG00020010154) ACOX2 (ENSCAFG00020010158) FAM107A (ENSCAFG00020010161) Laurasiatheria_c ANCESTRAL SPECIES 24 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00390000004226 ENSGT00390000002886.b.b ENSGT00940000162359 ENSGT01020000231229 ENSGT00940000164798 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 Chiroptera ANCESTRAL SPECIES 26 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00390000004226 ENSGT00390000002886.b.b ENSGT00940000162359 ENSGT01020000231229 ENSGT00940000164798 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 Megabat MODERN SPECIES 554 EMILIN2 (ENSPVAG00000007219) #16 LPIN2 (ENSPVAG00000007221) #17 MYOM1 (ENSPVAG00000007223) #19 MYL12A (ENSPVAG00000007226) #20 MYL12B (ENSPVAG00000007227) #21 TGIF1 (ENSPVAG00000007228) #22 Microchiroptera ANCESTRAL SPECIES 26 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000162359 ENSGT01020000231229 ENSGT00940000164798 ENSGT00940000162721 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 Microbat MODERN SPECIES 995 METTL4 (ENSMLUG00000003351) #12 NDC80 (ENSMLUG00000003354) #13 SMCHD1 (ENSMLUG00000003378) #15 EMILIN2 (ENSMLUG00000003397) #16 LPIN2 (ENSMLUG00000003403) #17 ENSMLUG00000029548 MYOM1 (ENSMLUG00000003417) #19 MYL12B (ENSMLUG00000005189) #21 TGIF1 (ENSMLUG00000025199) #22 DLGAP1 (ENSMLUG00000012142) #23 ENSMLUG00000030528 ZBTB14 (ENSMLUG00000016123) #26 EPB41L3 (ENSMLUG00000016125) #27 L3MBTL4 (ENSMLUG00000002011) ENSMLUG00000023508 ARHGAP28 (ENSMLUG00000005314) #28 LAMA1 (ENSMLUG00000004002) #30 LRRC30 (ENSMLUG00000004630) PTPRM (ENSMLUG00000016507) #32 RAB12 (ENSMLUG00000002883) #33 MTCL1 (ENSMLUG00000002889) #34 ENSMLUG00000013891 NDUFV2 (ENSMLUG00000013503) ANKRD12 (ENSMLUG00000008632) Greater horseshoe bat MODERN SPECIES 10 TYMS (ENSRFEG00010017484) YES1 (ENSRFEG00010017283) #8 ADCYAP1 (ENSRFEG00010017231) #9 ENSRFEG00010017213 ENSRFEG00010017153 ENSRFEG00010017105 ENSRFEG00010017086 METTL4 (ENSRFEG00010017011) #12 NDC80 (ENSRFEG00010016810) #13 SMCHD1 (ENSRFEG00010016132) #15 EMILIN2 (ENSRFEG00010016098) #16 LPIN2 (ENSRFEG00010016004) #17 MYOM1 (ENSRFEG00010014872) #19 ENSRFEG00010014795 ##21 MYL12B (ENSRFEG00010014767) #21 TGIF1 (ENSRFEG00010014659) #22 DLGAP1 (ENSRFEG00010014146) #23 AKAIN1 (ENSRFEG00010014046) #25 ENSRFEG00010014022 ZBTB14 (ENSRFEG00010013973) #26 EPB41L3 (ENSRFEG00010012327) #27 ENSRFEG00010012203 TMEM200C (ENSRFEG00010012187) L3MBTL4 (ENSRFEG00010011944) ENSRFEG00010011861 ARHGAP28 (ENSRFEG00010011354) #28 LAMA1 (ENSRFEG00010011271) #30 LRRC30 (ENSRFEG00010011243) PTPRM (ENSRFEG00010010873) #32 RAB12 (ENSRFEG00010010724) #33 ENSRFEG00010010493 Equus ANCESTRAL SPECIES 36 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313.i #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a.d #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000155638 ENSGT00950000182917.b ENSGT00390000000444 ENSGT00940000155295 ENSGT01090000263359 ENSGT00390000017571 ENSGT00940000162118 ENSGT00940000159287 ENSGT00950000182922.a.a.a.b.a.b.a.b.b ENSGT00940000156352 ENSGT00940000160354 ENSGT00390000011620.a.a.a Horse MODERN SPECIES 29 COLEC12 (ENSECAG00000018963) CETN1 (ENSECAG00000058680) CLUL1 (ENSECAG00000022352) TYMS (ENSECAG00000023203) ENOSF1 (ENSECAG00000012547) #7 YES1 (ENSECAG00000021666) #8 ADCYAP1 (ENSECAG00000033061) #9 METTL4 (ENSECAG00000006301) #12 NDC80 (ENSECAG00000008827) #13 SMCHD1 (ENSECAG00000014144) #15 EMILIN2 (ENSECAG00000057052) #16 LPIN2 (ENSECAG00000006280) #17 MYOM1 (ENSECAG00000013468) #19 MYL12A (ENSECAG00000051472) #20 MYL12B (ENSECAG00000038682) #21 TGIF1 (ENSECAG00000011078) #22 DLGAP1 (ENSECAG00000013739) #23 AKAIN1 (ENSECAG00000033364) #25 ZBTB14 (ENSECAG00000019218) #26 LAMA3 (ENSECAG00000021277) ENSECAG00000054828 ENSECAG00000043961 TTC39C (ENSECAG00000010545) CABYR (ENSECAG00000014148) OSBPL1A (ENSECAG00000015182) ENSECAG00000056623 IMPACT (ENSECAG00000020098) HRH4 (ENSECAG00000006494) ZNF521 (ENSECAG00000006546) ENSECAG00000004392 ENSECAG00000049495 Donkey MODERN SPECIES 27 ENSEASG00005026491 ENSEASG00005029646 ENSEASG00005034896 ENSEASG00005026337 ENSEASG00005025616 ENSEASG00005026849 ENSEASG00005024394 ENSEASG00005002722 #12 ENSEASG00005002730 #13 SMCHD1 (ENSEASG00005002865) #15 EMILIN2 (ENSEASG00005003573) #16 ENSEASG00005003579 #17 MYOM1 (ENSEASG00005003603) #19 MYL12A (ENSEASG00005023571) #20 MYL12B (ENSEASG00005029990) #21 TGIF1 (ENSEASG00005026544) #22 ENSEASG00005024534 #23 DLGAP1 (ENSEASG00005003653) #23 AKAIN1 (ENSEASG00005038786) #25 ENSEASG00005004330 #26 ENSEASG00005004417 ENSEASG00005004519 ENSEASG00005029371 ENSEASG00005004560 ENSEASG00005004612 ENSEASG00005005115 IMPACT (ENSEASG00005005120) HRH4 (ENSEASG00005029823) ZNF521 (ENSEASG00005005129) ENSEASG00005005135 PSMA8 (ENSEASG00005005145) Atlantogenata ANCESTRAL SPECIES 22 ENSGT00950000183074.A ENSGT00940000157209.jb ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Xenarthra ANCESTRAL SPECIES 681 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 Sloth MODERN SPECIES 9416 TGIF1 (ENSCHOG00000000162) #22 Armadillo MODERN SPECIES 3246 EMILIN2 (ENSDNOG00000019093) #16 LPIN2 (ENSDNOG00000016612) #17 MYOM1 (ENSDNOG00000016617) #19 MYL12A (ENSDNOG00000047523) #20 MYL12B (ENSDNOG00000039005) #21 ENSDNOG00000038003 TGIF1 (ENSDNOG00000046211) #22 ENSDNOG00000038018 #23 Afrotheria ANCESTRAL SPECIES 169 ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 Tenrec MODERN SPECIES 6974 TGIF1 (ENSETEG00000011891) #22 Afrotheria_a ANCESTRAL SPECIES 171 ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 Elephant MODERN SPECIES 375 ENSLAFG00000029660 TYMS (ENSLAFG00000014910) ENOSF1 (ENSLAFG00000014922) #7 YES1 (ENSLAFG00000002384) #8 ADCYAP1 (ENSLAFG00000014384) #9 METTL4 (ENSLAFG00000004505) #12 NDC80 (ENSLAFG00000004506) #13 ENSLAFG00000009375 #15 ENSLAFG00000009381 #15 EMILIN2 (ENSLAFG00000023146) #16 LPIN2 (ENSLAFG00000009393) #17 MYOM1 (ENSLAFG00000014655) #19 MYL12A (ENSLAFG00000011627) #20 MYL12B (ENSLAFG00000004353) #21 ENSLAFG00000030231 TGIF1 (ENSLAFG00000002354) #22 DLGAP1 (ENSLAFG00000002355) #23 ENSLAFG00000028371 ZBTB14 (ENSLAFG00000004952) #26 ENSLAFG00000026951 EPB41L3 (ENSLAFG00000006036) #27 ENSLAFG00000013989 ARHGAP28 (ENSLAFG00000008729) #28 MC2R (ENSLAFG00000011821) ENSLAFG00000014904 CETN1 (ENSLAFG00000026433) COLEC12 (ENSLAFG00000009593) THOC1 (ENSLAFG00000009585) USP14 (ENSLAFG00000009582) ROCK1 (ENSLAFG00000015369) GREB1L (ENSLAFG00000028717) Hyrax MODERN SPECIES 9941 TGIF1 (ENSPCAG00000003371) #22 Marsupialia ANCESTRAL SPECIES 1 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786.m.a ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019.b ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Opossum DUPLICATION Opossum MODERN SPECIES 5 ENSMODG00000005925 C16orf89 (ENSMODG00000005894) NAGPA (ENSMODG00000005871) ENSMODG00000005862 ENSMODG00000005853 ENSMODG00000005839 RBFOX1 (ENSMODG00000005826) ENSMODG00000024767 ENSMODG00000027367 TMEM114 (ENSMODG00000005797) METTL22 (ENSMODG00000005792) ABAT (ENSMODG00000005781) TMEM186 (ENSMODG00000005744) ENSMODG00000005737 ENSMODG00000049451 ENSMODG00000042650 #22 USP7 (ENSMODG00000005702) HAPSTR1 (ENSMODG00000005378) ENSMODG00000039411 GRIN2A (ENSMODG00000005363) ENSMODG00000005286 ENSMODG00000044837 EMP2 (ENSMODG00000038065) TEKT5 (ENSMODG00000005259) NUBP1 (ENSMODG00000005249) TVP23A (ENSMODG00000005174) CIITA (ENSMODG00000005234) DEXI (ENSMODG00000024780) CLEC16A (ENSMODG00000005166) PRM1 (ENSMODG00000005135) RMI2 (ENSMODG00000005130) Opossum MODERN SPECIES 2 ENSMODG00000021479 ENOSF1 (ENSMODG00000025620) #7 ENSMODG00000021477 #8 ENSMODG00000041633 ADCYAP1 (ENSMODG00000046330) #9 METTL4 (ENSMODG00000021472) #12 NDC80 (ENSMODG00000021471) #13 ENSMODG00000021469 #15 EMILIN2 (ENSMODG00000021467) #16 LPIN2 (ENSMODG00000021466) #17 ENSMODG00000036642 MYOM1 (ENSMODG00000021465) #19 MYL12A (ENSMODG00000049524) #20 MYL12B (ENSMODG00000043700) #20 ENSMODG00000049373 ENSMODG00000021462 #22 DLGAP1 (ENSMODG00000021461) #23 ENSMODG00000029291 ENSMODG00000043430 ENSMODG00000046796 ENSMODG00000048916 ZBTB14 (ENSMODG00000021460) #26 EPB41L3 (ENSMODG00000021459) #27 ENSMODG00000027341 TMEM200C (ENSMODG00000024724) L3MBTL4 (ENSMODG00000021457) ARHGAP28 (ENSMODG00000021455) #28 LAMA1 (ENSMODG00000021454) #30 ENSMODG00000024716 #31 PTPRM (ENSMODG00000021453) #32 ENSMODG00000049583 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786.m.a ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019.b ENSGT00940000155020 #32 ENSGT00940000159325.j #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.j Diprotodontia ANCESTRAL SPECIES 1 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786.m.a ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019.b ENSGT00940000155020 #32 ENSGT00940000159325.j #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.j ENSGT00390000007058 Diprotodontia_a ANCESTRAL SPECIES ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786.m.a.a ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158264.a ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019.b ENSGT00940000155020 #32 ENSGT00940000159325.j #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.j ENSGT00390000007058 Common wonbat DUPLICATION Common wonbat MODERN SPECIES 1199 ENSVURG00010010437 ENSVURG00010010669 #7 ENSVURG00010010688 #8 ENSVURG00010010705 ENSVURG00010010724 #9 ENSVURG00010010765 ENSVURG00010010802 ENSVURG00010010870 ENSVURG00010010889 #12 ENSVURG00010010920 #13 ENSVURG00010010980 #15 ENSVURG00010011114 #16 ENSVURG00010011130 #17 MYOM1 (ENSVURG00010011183) #19 ENSVURG00010011282 #20 ENSVURG00010011329 #22 ENSVURG00010011423 #23 ENSVURG00010012456 #25 ENSVURG00010012467 #26 ENSVURG00010012515 #27 ENSVURG00010012610 ENSVURG00010012663 #28 ENSVURG00010012770 #30 ENSVURG00010013130 ENSVURG00010013160 #32 ENSVURG00010013209 #33 ENSVURG00010013218 #34 ENSVURG00010013231 ENSVURG00010013243 ENSVURG00010013255 ENSVURG00010013266 Common wonbat MODERN SPECIES 1048 ENSVURG00010023183 ENSVURG00010023168 ENSVURG00010023157 #7 ENSVURG00010023153 ENSVURG00010023149 #8 ENSVURG00010023146 #9 ENSVURG00010023144 ENSVURG00010023135 ENSVURG00010023131 ENSVURG00010023124 #12 ENSVURG00010023117 #13 ENSVURG00010023083 #15 ENSVURG00010023064 #16 ENSVURG00010023043 #17 ENSVURG00010023030 #20 ENSVURG00010023018 #22 ENSVURG00010022798 #23 ENSVURG00010022752 #25 ENSVURG00010022745 #26 ENSVURG00010022705 #27 ENSVURG00010022676 ENSVURG00010022667 #28 ENSVURG00010022545 #30 ENSVURG00010022493 ENSVURG00010022483 #32 ENSVURG00010022474 #33 ENSVURG00010022463 #34 ENSVURG00010022449 ENSVURG00010022438 ENSVURG00010022431 ENSVURG00010022425 koala MODERN SPECIES 207 THOC1 (ENSPCIG00000026942) COLEC12 (ENSPCIG00000016565) CLUL1 (ENSPCIG00000015630) ENSPCIG00000031228 ENSPCIG00000015639 ENOSF1 (ENSPCIG00000015652) #7 YES1 (ENSPCIG00000015661) #8 ENSPCIG00000015925 #9 METTL4 (ENSPCIG00000016096) #12 NDC80 (ENSPCIG00000016100) #13 SMCHD1 (ENSPCIG00000016236) #15 EMILIN2 (ENSPCIG00000016780) #16 LPIN2 (ENSPCIG00000016789) #17 MYOM1 (ENSPCIG00000016799) #19 MYL12A (ENSPCIG00000016806) #20 TGIF1 (ENSPCIG00000016809) #22 ENSPCIG00000032039 #23 Wallaby MODERN SPECIES 10278 TGIF1 (ENSMEUG00000008263) #22 Tasmanian devil MODERN SPECIES ENSSHAG00000014829 COLEC12 (ENSSHAG00000015149) CLUL1 (ENSSHAG00000001520) ENSSHAG00000003102 ENOSF1 (ENSSHAG00000028284) #7 YES1 (ENSSHAG00000024195) #8 ADCYAP1 (ENSSHAG00000007533) #9 METTL4 (ENSSHAG00000025630) #12 NDC80 (ENSSHAG00000000858) #13 SMCHD1 (ENSSHAG00000002525) #15 EMILIN2 (ENSSHAG00000006785) #16 LPIN2 (ENSSHAG00000007520) #17 MYOM1 (ENSSHAG00000008942) #19 MYL12A (ENSSHAG00000025915) #20 MYL12B (ENSSHAG00000023112) #21 TGIF1 (ENSSHAG00000030511) #22 DLGAP1 (ENSSHAG00000012019) #23 ENSSHAG00000024123 AKAIN1 (ENSSHAG00000021908) #25 EPB41L3 (ENSSHAG00000007294) #27 ENSSHAG00000028600 TMEM200C (ENSSHAG00000021490) L3MBTL4 (ENSSHAG00000012679) ENSSHAG00000024209 #28 ENSSHAG00000009354 #28 LAMA1 (ENSSHAG00000009924) #30 LRRC30 (ENSSHAG00000011744) PTPRM (ENSSHAG00000007526) #32 RAB12 (ENSSHAG00000030836) #33 MTCL1 (ENSSHAG00000005041) #34 NDUFV2 (ENSSHAG00000021984) Platypus DUPLICATION Platypus MODERN SPECIES 19 ABHD16B (ENSOANG00000004927) ZBTB46 (ENSOANG00000004930) ENSOANG00000004931 ENSOANG00000049134 ZGPAT (ENSOANG00000004932) ARFRP1 (ENSOANG00000043071) ENSOANG00000004934 RTEL1 (ENSOANG00000004935) STMN3 (ENSOANG00000004938) GMEB2 (ENSOANG00000004939) HELZ2 (ENSOANG00000043462) ENSOANG00000004942 FNDC11 (ENSOANG00000041710) RAB5IF (ENSOANG00000041680) MYL9 (ENSOANG00000004944) ENSOANG00000051253 #22 DLGAP4 (ENSOANG00000004946) ENSOANG00000038341 ENSOANG00000002758 SRSF6 (ENSOANG00000008955) L3MBTL1 (ENSOANG00000014344) TOX2 (ENSOANG00000014345) RALGAPB (ENSOANG00000014346) CHD6 (ENSOANG00000014347) ENSOANG00000014348 ##16 LPIN3 (ENSOANG00000014349) PLCG1 (ENSOANG00000047399) TOP1 (ENSOANG00000014354) MAFB (ENSOANG00000044175) DHX35 (ENSOANG00000015094) FAM83D (ENSOANG00000044824) Platypus MODERN SPECIES 16 ENSOANG00000042482 TET3 (ENSOANG00000039284) ENSOANG00000007694 ENSOANG00000000460 ENSOANG00000050199 ENSOANG00000040047 ENSOANG00000021882 ENSOANG00000048785 #9 METTL4 (ENSOANG00000010844) #12 NDC80 (ENSOANG00000010845) #13 SMCHD1 (ENSOANG00000002708) #15 EMILIN2 (ENSOANG00000008916) #16 LPIN2 (ENSOANG00000008912) #17 MYOM1 (ENSOANG00000039529) #19 ENSOANG00000048757 ##21 TGIF1 (ENSOANG00000014153) #22 DLGAP1 (ENSOANG00000036705) #23 ENSOANG00000002065 AKAIN1 (ENSOANG00000046211) #25 ZBTB14 (ENSOANG00000037703) #26 EPB41L3 (ENSOANG00000003826) #27 ENSOANG00000041734 ENSOANG00000051289 L3MBTL4 (ENSOANG00000043216) ENSOANG00000044493 #28 ENSOANG00000000436 #28 LAMA1 (ENSOANG00000000432) #30 LRRC30 (ENSOANG00000014739) PTPRM (ENSOANG00000002405) #32 RAB12 (ENSOANG00000038672) #33 MTCL1 (ENSOANG00000015008) #34 Sauria ANCESTRAL SPECIES ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Archelosauria ANCESTRAL SPECIES 5 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Cryptodira ANCESTRAL SPECIES 7 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386.k #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Chinese turtle MODERN SPECIES 2237 THOC1 (ENSPSIG00000007691) COLEC12 (ENSPSIG00000007643) CLUL1 (ENSPSIG00000007587) TYMS (ENSPSIG00000007582) ENOSF1 (ENSPSIG00000007577) #7 YES1 (ENSPSIG00000007281) #8 ADCYAP1 (ENSPSIG00000007275) #9 METTL4 (ENSPSIG00000007210) #12 NDC80 (ENSPSIG00000006812) #13 SMCHD1 (ENSPSIG00000006146) #15 EMILIN2 (ENSPSIG00000006081) #16 LPIN2 (ENSPSIG00000005769) #17 MYOM1 (ENSPSIG00000005684) #19 ENSPSIG00000005666 ##21 ENSPSIG00000005662 ##21 TGIF1 (ENSPSIG00000005650) #22 DLGAP1 (ENSPSIG00000005548) #23 ENSPSIG00000001687 ZBTB14 (ENSPSIG00000005537) #26 EPB41L3 (ENSPSIG00000005287) #27 ENSPSIG00000005265 TMEM200C (ENSPSIG00000001683) ARHGAP28 (ENSPSIG00000005238) #28 LAMA1 (ENSPSIG00000017271) #30 ENSPSIG00000001677 Testudinoidea ANCESTRAL SPECIES ENSGT00390000009615 ENSGT00390000016232.o ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386.k #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Emydidae ANCESTRAL SPECIES ENSGT00390000009615 ENSGT00390000016232.o ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386.k #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 painted turtle MODERN SPECIES 7 ASZ1 (ENSCPBG00000007263) WNT2 (ENSCPBG00000007227) ST7 (ENSCPBG00000007194) CAPZA2 (ENSCPBG00000007179) MET (ENSCPBG00000007168) CAV1 (ENSCPBG00000007159) CAV2 (ENSCPBG00000007156) TES (ENSCPBG00000007139) TFEC (ENSCPBG00000007125) MDFIC (ENSCPBG00000007111) FOXP2 (ENSCPBG00000007098) PPP1R3A (ENSCPBG00000007087) MYOM1 (ENSCPBG00000007000) #19 ENSCPBG00000006970 ##21 ENSCPBG00000006966 ##21 TGIF1 (ENSCPBG00000006961) #22 DLGAP1 (ENSCPBG00000006952) #23 AKAIN1 (ENSCPBG00000006937) #25 ZBTB14 (ENSCPBG00000006929) #26 EPB41L3 (ENSCPBG00000006846) #27 TMEM200C (ENSCPBG00000006823) ARHGAP28 (ENSCPBG00000006810) #28 LAMA1 (ENSCPBG00000006787) #30 ENSCPBG00000006778 ATPSCKMT (ENSCPBG00000006764) CCT5 (ENSCPBG00000006758) SBK2 (ENSCPBG00000006752) ENSCPBG00000006745 ENSCPBG00000006739 ENSCPBG00000006735 MARCHF6 (ENSCPBG00000006716) Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 108 ENSTMTG00000018045 RALY (ENSTMTG00000018027) EIF2S2 (ENSTMTG00000018010) ASIP (ENSTMTG00000017959) AHCY (ENSTMTG00000017923) ITCH (ENSTMTG00000017861) DYNLRB1 (ENSTMTG00000017842) MAP1LC3A (ENSTMTG00000017835) PIGU (ENSTMTG00000017811) ENSTMTG00000017804 TP53INP2 (ENSTMTG00000017776) NCOA6 (ENSTMTG00000017760) GGT7 (ENSTMTG00000017714) RAB5IF (ENSTMTG00000017705) MYL9 (ENSTMTG00000017696) ENSTMTG00000017689 #22 ENSTMTG00000017678 ENSTMTG00000017656 AAR2 (ENSTMTG00000017641) ENSTMTG00000017632 EPB41L1 (ENSTMTG00000017604) SRSF6 (ENSTMTG00000017588) L3MBTL1 (ENSTMTG00000016877) SGK2 (ENSTMTG00000016783) IFT52 (ENSTMTG00000016766) MYBL2 (ENSTMTG00000016729) PTPRT (ENSTMTG00000014895) SLC32A1 (ENSTMTG00000014747) ARHGAP40 (ENSTMTG00000014730) ENSTMTG00000014722 ACTR5 (ENSTMTG00000014705) Three-toed box turtle MODERN SPECIES 24 USP14 (ENSTMTG00000020563) THOC1 (ENSTMTG00000020553) COLEC12 (ENSTMTG00000020542) CLUL1 (ENSTMTG00000020534) TYMS (ENSTMTG00000020516) ENOSF1 (ENSTMTG00000020509) #7 YES1 (ENSTMTG00000020501) #8 ADCYAP1 (ENSTMTG00000020494) #9 METTL4 (ENSTMTG00000020489) #12 NDC80 (ENSTMTG00000020470) #13 SMCHD1 (ENSTMTG00000020008) #15 EMILIN2 (ENSTMTG00000019915) #16 LPIN2 (ENSTMTG00000019888) #17 MYOM1 (ENSTMTG00000019821) #19 ENSTMTG00000019802 ##21 TGIF1 (ENSTMTG00000019792) #22 DLGAP1 (ENSTMTG00000019718) #23 ENSTMTG00000019702 ZBTB14 (ENSTMTG00000019697) #26 EPB41L3 (ENSTMTG00000014178) #27 TMEM200C (ENSTMTG00000013816) ENSTMTG00000013814 ENSTMTG00000013806 #28 LAMA1 (ENSTMTG00000011348) #30 LRRC30 (ENSTMTG00000011191) PTPRM (ENSTMTG00000011085) #32 RAB12 (ENSTMTG00000011054) #33 MTCL1 (ENSTMTG00000011018) #34 NDUFV2 (ENSTMTG00000010988) ANKRD12 (ENSTMTG00000010924) TWSG1 (ENSTMTG00000010901) Testudinidae ANCESTRAL SPECIES 4 ENSGT00390000009615 ENSGT00390000016232.p ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386.k #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.c #32 ENSGT00940000155020.d #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Goode s thornscrub tortoise MODERN SPECIES 11 ENSGEVG00005003959 COLEC12 (ENSGEVG00005003905) CLUL1 (ENSGEVG00005003891) TYMS (ENSGEVG00005003881) ENOSF1 (ENSGEVG00005020337) #7 YES1 (ENSGEVG00005020327) #8 ADCYAP1 (ENSGEVG00005020320) #9 METTL4 (ENSGEVG00005020306) #12 NDC80 (ENSGEVG00005020277) #13 SMCHD1 (ENSGEVG00005020243) #15 EMILIN2 (ENSGEVG00005020109) #16 LPIN2 (ENSGEVG00005020051) #17 MYOM1 (ENSGEVG00005019599) #19 ENSGEVG00005019502 ##21 ENSGEVG00005019498 ##21 TGIF1 (ENSGEVG00005019490) #22 DLGAP1 (ENSGEVG00005019404) #23 ENSGEVG00005019379 ZBTB14 (ENSGEVG00005019369) #26 EPB41L3 (ENSGEVG00005019335) #27 TMEM200C (ENSGEVG00005019313) ARHGAP28 (ENSGEVG00005019229) #28 LAMA1 (ENSGEVG00005019087) #30 LRRC30 (ENSGEVG00005019064) ENSGEVG00005018990 #32 ENSGEVG00005018962 #32 RAB12 (ENSGEVG00005018901) #33 ENSGEVG00005018881 #34 NDUFV2 (ENSGEVG00005018841) ANKRD12 (ENSGEVG00005018799) TWSG1 (ENSGEVG00005018772) Abingdon island giant tortoise DUPLICATION Abingdon island giant tortoise MODERN SPECIES 1493 MYOM1 (ENSCABG00000011311) #19 ENSCABG00000011304 ##21 ENSCABG00000011303 ##21 TGIF1 (ENSCABG00000011302) #22 DLGAP1 (ENSCABG00000011294) #23 Abingdon island giant tortoise MODERN SPECIES 2721 MAP1LC3A (ENSCABG00000001089) PIGU (ENSCABG00000001045) ENSCABG00000001032 TP53INP2 (ENSCABG00000001015) NCOA6 (ENSCABG00000001002) GGT7 (ENSCABG00000000994) RAB5IF (ENSCABG00000000991) MYL9 (ENSCABG00000000968) ENSCABG00000000962 #22 ENSCABG00000000957 ENSCABG00000000950 AAR2 (ENSCABG00000000946) EPB41L1 (ENSCABG00000000936) SRSF6 (ENSCABG00000000928) L3MBTL1 (ENSCABG00000000902) SGK2 (ENSCABG00000000887) IFT52 (ENSCABG00000000846) MYBL2 (ENSCABG00000000835) PTPRT (ENSCABG00000000308) Archosauria ANCESTRAL SPECIES ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Australian saltwater crocodile MODERN SPECIES THOC1 (ENSCPRG00005012815) COLEC12 (ENSCPRG00005012805) CLUL1 (ENSCPRG00005012760) TYMS (ENSCPRG00005012757) ENOSF1 (ENSCPRG00005012735) #7 YES1 (ENSCPRG00005012732) #8 ADCYAP1 (ENSCPRG00005012688) #9 METTL4 (ENSCPRG00005012598) #12 NDC80 (ENSCPRG00005012579) #13 SMCHD1 (ENSCPRG00005011951) #15 EMILIN2 (ENSCPRG00005011842) #16 LPIN2 (ENSCPRG00005011838) #17 MYOM1 (ENSCPRG00005011737) #19 ENSCPRG00005011730 ##21 ENSCPRG00005011726 ##21 TGIF1 (ENSCPRG00005011653) #22 DLGAP1 (ENSCPRG00005011650) #23 ENSCPRG00005011531 ZBTB14 (ENSCPRG00005011530) #26 EPB41L3 (ENSCPRG00005010517) #27 TMEM200C (ENSCPRG00005010341) ARHGAP28 (ENSCPRG00005010248) #28 LAMA1 (ENSCPRG00005009801) #30 ENSCPRG00005009745 #31 PTPRM (ENSCPRG00005009709) #32 RAB12 (ENSCPRG00005009666) #33 MTCL1 (ENSCPRG00005009652) #34 NDUFV2 (ENSCPRG00005009576) ANKRD12 (ENSCPRG00005009565) TWSG1 (ENSCPRG00005009562) RALBP1 (ENSCPRG00005009551) Aves ANCESTRAL SPECIES 9 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00990000213402 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a African ostrich MODERN SPECIES 328 COLEC12 (ENSSCUG00000005359) CLUL1 (ENSSCUG00000005362) TYMS (ENSSCUG00000005364) ENOSF1 (ENSSCUG00000005365) #7 YES1 (ENSSCUG00000005366) #8 ADCYAP1 (ENSSCUG00000005367) #9 METTL4 (ENSSCUG00000005369) #12 NDC80 (ENSSCUG00000005371) #13 ENSSCUG00000005374 SMCHD1 (ENSSCUG00000005384) #15 EMILIN2 (ENSSCUG00000005455) #16 LPIN2 (ENSSCUG00000005459) #17 MYOM1 (ENSSCUG00000005467) #19 ENSSCUG00000005474 ##21 MYL12B (ENSSCUG00000005477) #21 TGIF1 (ENSSCUG00000005480) #22 ENSSCUG00000005485 DLGAP1 (ENSSCUG00000005488) #23 ENSSCUG00000005492 ENSSCUG00000005495 ZBTB14 (ENSSCUG00000005497) #26 EPB41L3 (ENSSCUG00000005503) #27 TMEM200C (ENSSCUG00000005530) ENSSCUG00000005532 ARHGAP28 (ENSSCUG00000005535) #28 LAMA1 (ENSSCUG00000005573) #30 LRRC30 (ENSSCUG00000005611) PTPRM (ENSSCUG00000005616) #32 ENSSCUG00000005620 #33 MTCL1 (ENSSCUG00000005621) #34 NDUFV2 (ENSSCUG00000005623) Neognathae ANCESTRAL SPECIES ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00990000213402 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Galloanserae ANCESTRAL SPECIES ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00990000213402 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000163916 #31 ENSGT00940000164558.b ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 Anatidae ANCESTRAL SPECIES 3 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.c.a #20 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000164558.b ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Pink-footed goose MODERN SPECIES 13 ROCK1 (ENSABRG00000017265) USP14 (ENSABRG00000018751) THOC1 (ENSABRG00000019176) COLEC12 (ENSABRG00000019303) CLUL1 (ENSABRG00000019308) TYMS (ENSABRG00000019312) YES1 (ENSABRG00000019314) #8 ADCYAP1 (ENSABRG00000019320) #9 METTL4 (ENSABRG00000019330) #12 NDC80 (ENSABRG00000019332) #13 SMCHD1 (ENSABRG00000019351) #15 EMILIN2 (ENSABRG00000019602) #16 LPIN2 (ENSABRG00000019611) #17 MYOM1 (ENSABRG00000019644) #19 ENSABRG00000019670 #20 TGIF1 (ENSABRG00000019672) #22 DLGAP1 (ENSABRG00000019680) #23 AKAIN1 (ENSABRG00000019692) #25 Duck MODERN SPECIES 10 USP14 (ENSAPLG00000000901) THOC1 (ENSAPLG00000016149) COLEC12 (ENSAPLG00000015987) CLUL1 (ENSAPLG00000015948) TYMS (ENSAPLG00000015661) YES1 (ENSAPLG00000015182) #8 ADCYAP1 (ENSAPLG00000028139) #9 METTL4 (ENSAPLG00000015046) #12 NDC80 (ENSAPLG00000014505) #13 SMCHD1 (ENSAPLG00000013237) #15 EMILIN2 (ENSAPLG00000013210) #16 LPIN2 (ENSAPLG00000012547) #17 MYOM1 (ENSAPLG00000010648) #19 ENSAPLG00000010564 ##21 MYL12B (ENSAPLG00000022070) #21 TGIF1 (ENSAPLG00000010541) #22 DLGAP1 (ENSAPLG00000010212) #23 ENSAPLG00000022695 ZBTB14 (ENSAPLG00000011548) #26 EPB41L3 (ENSAPLG00000012505) #27 ENSAPLG00000025812 TMEM200C (ENSAPLG00000027090) ARHGAP28 (ENSAPLG00000011853) #28 LAMA1 (ENSAPLG00000010343) #30 ENSAPLG00000011628 PTPRM (ENSAPLG00000008518) #32 RAB12 (ENSAPLG00000008252) #33 MTCL1 (ENSAPLG00000008150) #34 NDUFV2 (ENSAPLG00000008082) ANKRD12 (ENSAPLG00000024129) TWSG1 (ENSAPLG00000007766) Phasianidae ANCESTRAL SPECIES 1 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00990000213402 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000163916 #31 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000163916 #31 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Turkey MODERN SPECIES 22 ENSMGAG00000009171 #34 ENSMGAG00000009197 #33 ENSMGAG00000009204 ENSMGAG00000017771 #32 ENSMGAG00000009315 #32 ENSMGAG00000015823 #31 ENSMGAG00000009369 #28 ENSMGAG00000021670 #30 ENSMGAG00000017963 ENSMGAG00000017603 ENSMGAG00000021318 #27 ENSMGAG00000009404 #27 ENSMGAG00000015827 #26 ENSMGAG00000016772 ENSMGAG00000009471 #23 ENSMGAG00000017748 #22 ENSMGAG00000009505 ##21 MYOM1 (ENSMGAG00000009512) #19 ENSMGAG00000009626 #16 ENSMGAG00000009591 #17 SMCHD1 (ENSMGAG00000009642) #15 ENSMGAG00000009739 #12 ENSMGAG00000009700 #13 ENSMGAG00000008509 SOCS6 (ENSMGAG00000015440) ENSMGAG00000008306 ENSMGAG00000021272 ENSMGAG00000008393 CBLN2 (ENSMGAG00000008302) ENSMGAG00000008273 ENSMGAG00000015437 Chicken MODERN SPECIES 11 USP14 (ENSGALG00010005033) THOC1 (ENSGALG00010005025) COLEC12 (ENSGALG00010003921) CLUL1 (ENSGALG00010003873) TYMS (ENSGALG00010003884) YES1 (ENSGALG00010003874) #8 ADCYAP1 (ENSGALG00010004036) #9 METTL4 (ENSGALG00010001507) #12 NDC80 (ENSGALG00010001457) #13 SMCHD1 (ENSGALG00010001364) #15 EMILIN2 (ENSGALG00010001313) #16 LPIN2 (ENSGALG00010001279) #17 MYOM1 (ENSGALG00010001347) #19 MYL12A (ENSGALG00010001297) ##21 MYL12B (ENSGALG00010002352) #21 TGIF1 (ENSGALG00010001288) #22 DLGAP1 (ENSGALG00010001274) #23 AKAIN1 (ENSGALG00010001595) #25 ZBTB14 (ENSGALG00010001586) #26 EPB41L3 (ENSGALG00010001556) #27 ENSGALG00010001175 TMEM200C (ENSGALG00010001172) ENSGALG00010001211 ARHGAP28 (ENSGALG00010002017) #28 LAMA1 (ENSGALG00010001967) #30 LRRC30 (ENSGALG00010002027) #31 PTPRM (ENSGALG00010001940) #32 RAB12 (ENSGALG00010001892) #33 MTCL1 (ENSGALG00010001880) #34 NDUFV2 (ENSGALG00010001849) ANKRD12 (ENSGALG00010001845) Japanese quail MODERN SPECIES 11 THOC1 (ENSCJPG00005009262) ENSCJPG00005009261 COLEC12 (ENSCJPG00005009259) CLUL1 (ENSCJPG00005009258) TYMS (ENSCJPG00005009257) YES1 (ENSCJPG00005009256) #8 ADCYAP1 (ENSCJPG00005009254) #9 METTL4 (ENSCJPG00005009246) #12 NDC80 (ENSCJPG00005009037) #13 ENSCJPG00005009036 #15 EMILIN2 (ENSCJPG00005008950) #16 ENSCJPG00005008949 #17 ENSCJPG00005008948 #17 MYOM1 (ENSCJPG00005008718) #19 ENSCJPG00005008717 ##21 TGIF1 (ENSCJPG00005008716) #22 ENSCJPG00005008706 DLGAP1 (ENSCJPG00005008680) #23 ENSCJPG00005008659 ZBTB14 (ENSCJPG00005008602) #26 EPB41L3 (ENSCJPG00005008600) #27 ENSCJPG00005008599 TMEM200C (ENSCJPG00005008574) ARHGAP28 (ENSCJPG00005008455) #28 LAMA1 (ENSCJPG00005008450) #30 ENSCJPG00005008449 #31 PTPRM (ENSCJPG00005008402) #32 RAB12 (ENSCJPG00005008327) #33 MTCL1 (ENSCJPG00005008322) #34 NDUFV2 (ENSCJPG00005008319) ANKRD12 (ENSCJPG00005008318) Neognathae_b ANCESTRAL SPECIES 3 ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Neognathae_c ANCESTRAL SPECIES 1 ENSGT00960000189334 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.e.a #32 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Golden eagle MODERN SPECIES 20 CLUL1 (ENSACCG00020007379) TYMS (ENSACCG00020007407) ENSACCG00020007423 YES1 (ENSACCG00020007451) #8 ADCYAP1 (ENSACCG00020007471) #9 ENSACCG00020007486 ENSACCG00020007495 METTL4 (ENSACCG00020007504) #12 NDC80 (ENSACCG00020007587) #13 SMCHD1 (ENSACCG00020007610) #15 EMILIN2 (ENSACCG00020007675) #16 LPIN2 (ENSACCG00020007735) #17 ENSACCG00020007754 ##21 MYOM1 (ENSACCG00020007787) #19 ENSACCG00020007822 ##21 TGIF1 (ENSACCG00020007830) #22 DLGAP1 (ENSACCG00020007855) #23 AKAIN1 (ENSACCG00020007871) #25 ZBTB14 (ENSACCG00020007885) #26 EPB41L3 (ENSACCG00020008915) #27 TMEM200C (ENSACCG00020009922) ARHGAP28 (ENSACCG00020009953) #28 LAMA1 (ENSACCG00020010001) #30 LRRC30 (ENSACCG00020010026) PTPRM (ENSACCG00020010146) #32 RAB12 (ENSACCG00020010245) #33 MTCL1 (ENSACCG00020010301) #34 TWSG1 (ENSACCG00020010347) ANKRD12 (ENSACCG00020010370) NDUFV2 (ENSACCG00020010393) RALBP1 (ENSACCG00020010402) Kakapo MODERN SPECIES ENSSHBG00005009390 USP14 (ENSSHBG00005009402) THOC1 (ENSSHBG00005009432) COLEC12 (ENSSHBG00005009472) CLUL1 (ENSSHBG00005009500) TYMS (ENSSHBG00005009541) YES1 (ENSSHBG00005009549) #8 ADCYAP1 (ENSSHBG00005009604) #9 METTL4 (ENSSHBG00005009622) #12 NDC80 (ENSSHBG00005009637) #13 SMCHD1 (ENSSHBG00005009701) #15 EMILIN2 (ENSSHBG00005009847) #16 LPIN2 (ENSSHBG00005009886) #17 MYOM1 (ENSSHBG00005009940) #19 ENSSHBG00005010016 ##21 TGIF1 (ENSSHBG00005010058) #22 DLGAP1 (ENSSHBG00005010073) #23 ENSSHBG00005010098 ENSSHBG00005010107 ZBTB14 (ENSSHBG00005010118) #26 EPB41L3 (ENSSHBG00005010140) #27 TMEM200C (ENSSHBG00005010241) ARHGAP28 (ENSSHBG00005010310) #28 LAMA1 (ENSSHBG00005000448) #30 LRRC30 (ENSSHBG00005000506) ENSSHBG00005000569 #32 FBXO15 (ENSSHBG00005000593) TIMM21 (ENSSHBG00005000597) CYB5A (ENSSHBG00005002134) C18orf63 (ENSSHBG00005002153) DIPK1C (ENSSHBG00005002169) Passeriformes ANCESTRAL SPECIES ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Great tit MODERN SPECIES 11 ROCK1 (ENSPMJG00000014679) USP14 (ENSPMJG00000014678) THOC1 (ENSPMJG00000014677) COLEC12 (ENSPMJG00000014676) CLUL1 (ENSPMJG00000014675) TYMS (ENSPMJG00000014674) YES1 (ENSPMJG00000014673) #8 ADCYAP1 (ENSPMJG00000014671) #9 METTL4 (ENSPMJG00000014667) #12 ENSPMJG00000014666 #13 ENSPMJG00000014665 #15 EMILIN2 (ENSPMJG00000014664) #16 LPIN2 (ENSPMJG00000014663) #17 MYOM1 (ENSPMJG00000014662) #19 ENSPMJG00000014661 ##21 TGIF1 (ENSPMJG00000014660) #22 DLGAP1 (ENSPMJG00000014657) #23 AKAIN1 (ENSPMJG00000014655) #25 ZBTB14 (ENSPMJG00000014654) #26 EPB41L3 (ENSPMJG00000014653) #27 ENSPMJG00000014651 TMEM200C (ENSPMJG00000014650) ARHGAP28 (ENSPMJG00000014648) #28 LAMA1 (ENSPMJG00000014647) #30 LRRC30 (ENSPMJG00000014646) PTPRM (ENSPMJG00000014635) #32 RAB12 (ENSPMJG00000014630) #33 MTCL1 (ENSPMJG00000014629) #34 NDUFV2 (ENSPMJG00000014627) ANKRD12 (ENSPMJG00000014626) TWSG1 (ENSPMJG00000014623) Passeriformes_d ANCESTRAL SPECIES ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Flycatcher DUPLICATION Flycatcher MODERN SPECIES 12 ENSFALG00000006583 ENSFALG00000012549 ENSFALG00000012554 ENSFALG00000025915 ENSFALG00000012559 ENSFALG00000012563 ENSFALG00000012569 ENSFALG00000012591 ENSFALG00000012620 PIGU (ENSFALG00000012629) ENSFALG00000025882 ENSFALG00000012647 GGT7 (ENSFALG00000012666) ENSFALG00000012694 ENSFALG00000025016 ENSFALG00000028854 #22 ENSFALG00000024721 ENSFALG00000012718 ENSFALG00000012739 EPB41L1 (ENSFALG00000012755) ENSFALG00000025812 ENSFALG00000012779 ENSFALG00000027527 AHCY (ENSFALG00000010589) ASIP (ENSFALG00000025930) EIF2S2 (ENSFALG00000010608) ENSFALG00000026368 CHMP4B (ENSFALG00000005962) ZNF341 (ENSFALG00000005944) PXMP4 (ENSFALG00000005928) ENSFALG00000005914 Flycatcher MODERN SPECIES 11 ROCK1 (ENSFALG00000006185) USP14 (ENSFALG00000028057) THOC1 (ENSFALG00000006194) COLEC12 (ENSFALG00000006224) CLUL1 (ENSFALG00000006234) TYMS (ENSFALG00000006240) YES1 (ENSFALG00000023811) #8 ADCYAP1 (ENSFALG00000028660) #9 METTL4 (ENSFALG00000006257) #12 ENSFALG00000006264 #13 SMCHD1 (ENSFALG00000006275) #15 EMILIN2 (ENSFALG00000006279) #16 LPIN2 (ENSFALG00000006288) #17 MYOM1 (ENSFALG00000006302) #19 ENSFALG00000028607 ##21 TGIF1 (ENSFALG00000025737) #22 DLGAP1 (ENSFALG00000006315) #23 ENSFALG00000006321 ZBTB14 (ENSFALG00000029022) #26 EPB41L3 (ENSFALG00000006324) #27 TMEM200C (ENSFALG00000014191) ARHGAP28 (ENSFALG00000006329) #28 LAMA1 (ENSFALG00000006330) #30 LRRC30 (ENSFALG00000014193) PTPRM (ENSFALG00000006343) #32 RAB12 (ENSFALG00000023640) #33 MTCL1 (ENSFALG00000006370) #34 NDUFV2 (ENSFALG00000006374) ANKRD12 (ENSFALG00000006379) TWSG1 (ENSFALG00000027520) ENSFALG00000028225 Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000153607.c.b #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Passeroidea ANCESTRAL SPECIES 2 ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00560000078638 #25 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00940000166801 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020.f #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 Common canary MODERN SPECIES USP14 (ENSSCAG00000010244) THOC1 (ENSSCAG00000010017) COLEC12 (ENSSCAG00000009939) CLUL1 (ENSSCAG00000009935) TYMS (ENSSCAG00000009929) YES1 (ENSSCAG00000009919) #8 ADCYAP1 (ENSSCAG00000009910) #9 METTL4 (ENSSCAG00000009903) #12 NDC80 (ENSSCAG00000009901) #13 SMCHD1 (ENSSCAG00000009893) #15 EMILIN2 (ENSSCAG00000009886) #16 LPIN2 (ENSSCAG00000009880) #17 MYOM1 (ENSSCAG00000009651) #19 ENSSCAG00000009601 ##21 ENSSCAG00000009591 ##21 TGIF1 (ENSSCAG00000009584) #22 DLGAP1 (ENSSCAG00000009525) #23 ENSSCAG00000009479 ZBTB14 (ENSSCAG00000009472) #26 EPB41L3 (ENSSCAG00000009458) #27 TMEM200C (ENSSCAG00000009443) ARHGAP28 (ENSSCAG00000009422) #28 ENSSCAG00000009417 #30 ENSSCAG00000009395 #30 LRRC30 (ENSSCAG00000009384) PTPRM (ENSSCAG00000009314) #32 RAB12 (ENSSCAG00000009254) #33 MTCL1 (ENSSCAG00000009233) #34 NDUFV2 (ENSSCAG00000009198) ANKRD12 (ENSSCAG00000009189) TWSG1 (ENSSCAG00000009178) Zebra finch DUPLICATION Zebra finch MODERN SPECIES 13 RBM39 (ENSTGUG00000003048) ENSTGUG00000003078 PHF20 (ENSTGUG00000003083) NDRG3 (ENSTGUG00000003092) RALGAPB (ENSTGUG00000003151) CHD6 (ENSTGUG00000003179) RBL1 (ENSTGUG00000003231) SAMHD1 (ENSTGUG00000003280) ENSTGUG00000003300 PIGU (ENSTGUG00000003310) TP53INP2 (ENSTGUG00000003333) NCOA6 (ENSTGUG00000003336) GGT7 (ENSTGUG00000003352) RAB5IF (ENSTGUG00000003394) MYL9 (ENSTGUG00000019646) ENSTGUG00000027480 #22 DLGAP4 (ENSTGUG00000003402) AAR2 (ENSTGUG00000025845) EPB41L1 (ENSTGUG00000003444) SRSF6 (ENSTGUG00000003455) L3MBTL1 (ENSTGUG00000003474) ENSTGUG00000003507 ITCH (ENSTGUG00000003516) DYNLRB1 (ENSTGUG00000026456) MAP1LC3A (ENSTGUG00000027468) CEP250 (ENSTGUG00000003580) ENSTGUG00000026912 GDF5 (ENSTGUG00000003594) ENSTGUG00000022461 UQCC1 (ENSTGUG00000003601) EIF6 (ENSTGUG00000024120) Zebra finch MODERN SPECIES 12 ROCK1 (ENSTGUG00000010253) USP14 (ENSTGUG00000010223) THOC1 (ENSTGUG00000010204) COLEC12 (ENSTGUG00000010195) CLUL1 (ENSTGUG00000010187) TYMS (ENSTGUG00000010173) YES1 (ENSTGUG00000010159) #8 ADCYAP1 (ENSTGUG00000021936) #9 METTL4 (ENSTGUG00000010144) #12 NDC80 (ENSTGUG00000010126) #13 SMCHD1 (ENSTGUG00000010092) #15 EMILIN2 (ENSTGUG00000019550) #16 LPIN2 (ENSTGUG00000010074) #17 MYOM1 (ENSTGUG00000010031) #19 ENSTGUG00000010026 ##21 TGIF1 (ENSTGUG00000021525) #22 DLGAP1 (ENSTGUG00000010015) #23 AKAIN1 (ENSTGUG00000026309) #25 ZBTB14 (ENSTGUG00000026034) #26 EPB41L3 (ENSTGUG00000009980) #27 ENSTGUG00000025068 TMEM200C (ENSTGUG00000025257) ARHGAP28 (ENSTGUG00000009964) #28 ENSTGUG00000024157 #30 PTPRM (ENSTGUG00000009897) #32 RAB12 (ENSTGUG00000009889) #33 MTCL1 (ENSTGUG00000009883) #34 NDUFV2 (ENSTGUG00000009858) ANKRD12 (ENSTGUG00000009842) TWSG1 (ENSTGUG00000009833) RALBP1 (ENSTGUG00000009818) Medium ground finch DUPLICATION Medium ground finch MODERN SPECIES 184 RBM39 (ENSGFOG00000008480) ENSGFOG00000008453 PHF20 (ENSGFOG00000008410) NDRG3 (ENSGFOG00000008383) ENSGFOG00000008372 RALGAPB (ENSGFOG00000008317) CHD6 (ENSGFOG00000008008) RBL1 (ENSGFOG00000007635) SAMHD1 (ENSGFOG00000006379) PIGU (ENSGFOG00000006317) ENSGFOG00000006311 NCOA6 (ENSGFOG00000006304) GGT7 (ENSGFOG00000006289) RAB5IF (ENSGFOG00000006281) MYL9 (ENSGFOG00000006277) ENSGFOG00000006275 #22 ENSGFOG00000006268 ENSGFOG00000006261 ENSGFOG00000006253 EPB41L1 (ENSGFOG00000006224) SRSF6 (ENSGFOG00000006215) L3MBTL1 (ENSGFOG00000006197) ENSGFOG00000006187 Medium ground finch MODERN SPECIES 8 ROCK1 (ENSGFOG00000004833) USP14 (ENSGFOG00000004818) THOC1 (ENSGFOG00000004582) COLEC12 (ENSGFOG00000004526) CLUL1 (ENSGFOG00000004502) TYMS (ENSGFOG00000004489) YES1 (ENSGFOG00000004474) #8 ADCYAP1 (ENSGFOG00000004443) #9 METTL4 (ENSGFOG00000004006) #12 NDC80 (ENSGFOG00000003969) #13 SMCHD1 (ENSGFOG00000003902) #15 EMILIN2 (ENSGFOG00000003888) #16 LPIN2 (ENSGFOG00000003847) #17 MYOM1 (ENSGFOG00000003776) #19 MYL12B (ENSGFOG00000003744) #21 TGIF1 (ENSGFOG00000003724) #22 DLGAP1 (ENSGFOG00000003709) #23 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Episquamata ANCESTRAL SPECIES 1 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Toxicofera ANCESTRAL SPECIES 8 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Lizard MODERN SPECIES 3 FAM210A (ENSACAG00000013169) ENSACAG00000034999 LDLRAD4 (ENSACAG00000013183) CEP192 (ENSACAG00000013197) SEH1L (ENSACAG00000013294) PTPN2 (ENSACAG00000013333) PSMG2 (ENSACAG00000013408) ENSACAG00000037756 ENSACAG00000013429 ENSACAG00000043353 ENSACAG00000038763 ENSACAG00000008882 #15 EMILIN2 (ENSACAG00000009078) #16 LPIN2 (ENSACAG00000009151) #17 MYOM1 (ENSACAG00000009246) #19 TGIF1 (ENSACAG00000044052) #22 ENSACAG00000009571 ##21 DLGAP1 (ENSACAG00000009590) #23 ENSACAG00000037635 ENSACAG00000041171 ENSACAG00000042774 ZBTB14 (ENSACAG00000009653) #26 EPB41L3 (ENSACAG00000009659) #27 ENSACAG00000039557 ENSACAG00000036653 TMEM200C (ENSACAG00000009890) ENSACAG00000010061 ENSACAG00000027747 ENSACAG00000041056 ENSACAG00000010062 ENSACAG00000010074 Elapidae ANCESTRAL SPECIES 8 ENSGT01030000234517.A.i ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.m.a ##15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.e ENSGT00390000007058 ENSGT00940000154639 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 2 ENSNNAG00000001010 ENSNNAG00000000994 EIF2S2 (ENSNNAG00000000981) ASIP (ENSNNAG00000000968) AHCY (ENSNNAG00000000953) ITCH (ENSNNAG00000000909) DYNLRB1 (ENSNNAG00000000888) MAP1LC3A (ENSNNAG00000000871) PIGU (ENSNNAG00000000795) ENSNNAG00000000782 TP53INP2 (ENSNNAG00000000774) NCOA6 (ENSNNAG00000000742) GGT7 (ENSNNAG00000002814) RAB5IF (ENSNNAG00000002806) ENSNNAG00000002801 ENSNNAG00000002796 #22 ENSNNAG00000002784 ENSNNAG00000002776 ENSNNAG00000002771 AAR2 (ENSNNAG00000002767) EPB41L1 (ENSNNAG00000002751) SRSF6 (ENSNNAG00000002740) L3MBTL1 (ENSNNAG00000002690) SGK2 (ENSNNAG00000002672) IFT52 (ENSNNAG00000002651) MYBL2 (ENSNNAG00000002639) ENSNNAG00000002594 ENSNNAG00000002582 SLC32A1 (ENSNNAG00000002576) ARHGAP40 (ENSNNAG00000002554) ENSNNAG00000002539 Indian cobra MODERN SPECIES 2 ENSNNAG00000017389 ROCK1 (ENSNNAG00000017342) USP14 (ENSNNAG00000017327) THOC1 (ENSNNAG00000017309) COLEC12 (ENSNNAG00000017287) TYMS (ENSNNAG00000017269) ENOSF1 (ENSNNAG00000017263) #7 YES1 (ENSNNAG00000017256) #8 ADCYAP1 (ENSNNAG00000017250) #9 METTL4 (ENSNNAG00000017245) #12 NDC80 (ENSNNAG00000017213) #13 ENSNNAG00000016346 ##15 LPIN2 (ENSNNAG00000016225) #17 MYOM1 (ENSNNAG00000016151) #19 EMILIN2 (ENSNNAG00000016113) #16 TGIF1 (ENSNNAG00000016102) #22 DLGAP1 (ENSNNAG00000016020) #23 ENSNNAG00000016002 ZBTB14 (ENSNNAG00000015997) #26 EPB41L3 (ENSNNAG00000015972) #27 TMEM200C (ENSNNAG00000015955) ARHGAP28 (ENSNNAG00000015909) #28 LAMA1 (ENSNNAG00000015780) #30 LRRC30 (ENSNNAG00000015764) PTPRM (ENSNNAG00000015463) #32 RAB12 (ENSNNAG00000015414) #33 MTCL1 (ENSNNAG00000015366) #34 NDUFV2 (ENSNNAG00000015337) ANKRD12 (ENSNNAG00000015307) TWSG1 (ENSNNAG00000015277) RALBP1 (ENSNNAG00000015264) Elapidae_a ANCESTRAL SPECIES 14 ENSGT01030000234517.A.i ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.m.a ##15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.e ENSGT00390000007058 ENSGT00940000154639 Blue-lipped sea krait MODERN SPECIES 320 ENSLLTG00000014554 #17 MYOM1 (ENSLLTG00000014562) #19 ENSLLTG00000014576 ##21 TGIF1 (ENSLLTG00000014579) #22 DLGAP1 (ENSLLTG00000014580) #23 Acanthophiinae ANCESTRAL SPECIES 16 ENSGT01030000234517.A.i ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.m.a ##15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.e ENSGT00390000007058 ENSGT00940000154639 Eastern brown snake DUPLICATION Eastern brown snake MODERN SPECIES 8 ENSPTXG00000007812 ENSPTXG00000007811 EIF2S2 (ENSPTXG00000007809) ASIP (ENSPTXG00000007806) AHCY (ENSPTXG00000007803) ITCH (ENSPTXG00000007800) DYNLRB1 (ENSPTXG00000007798) MAP1LC3A (ENSPTXG00000007795) PIGU (ENSPTXG00000007794) ENSPTXG00000007791 TP53INP2 (ENSPTXG00000007790) NCOA6 (ENSPTXG00000007788) GGT7 (ENSPTXG00000007783) RAB5IF (ENSPTXG00000007780) ENSPTXG00000007779 ENSPTXG00000007777 #22 ENSPTXG00000007775 ENSPTXG00000007773 AAR2 (ENSPTXG00000007770) EPB41L1 (ENSPTXG00000007765) SRSF6 (ENSPTXG00000007762) L3MBTL1 (ENSPTXG00000007761) SGK2 (ENSPTXG00000007760) IFT52 (ENSPTXG00000007726) MYBL2 (ENSPTXG00000007725) PTPRT (ENSPTXG00000007607) SLC32A1 (ENSPTXG00000007605) ARHGAP40 (ENSPTXG00000007603) ENSPTXG00000007602 ACTR5 (ENSPTXG00000007600) PPP1R16B (ENSPTXG00000007598) Eastern brown snake MODERN SPECIES 11 THOC1 (ENSPTXG00000007030) COLEC12 (ENSPTXG00000007031) TYMS (ENSPTXG00000007032) ENOSF1 (ENSPTXG00000007033) #7 YES1 (ENSPTXG00000007034) #8 ADCYAP1 (ENSPTXG00000007035) #9 ENSPTXG00000007036 METTL4 (ENSPTXG00000007037) #12 NDC80 (ENSPTXG00000007038) #13 SMCHD1 (ENSPTXG00000007039) ##15 ENSPTXG00000007040 EMILIN2 (ENSPTXG00000007041) #16 LPIN2 (ENSPTXG00000007245) #17 MYOM1 (ENSPTXG00000007247) #19 ENSPTXG00000007831 ##21 TGIF1 (ENSPTXG00000007832) #22 DLGAP1 (ENSPTXG00000007834) #23 ENSPTXG00000007858 ZBTB14 (ENSPTXG00000007859) #26 EPB41L3 (ENSPTXG00000007862) #27 TMEM200C (ENSPTXG00000007865) ARHGAP28 (ENSPTXG00000007868) #28 LAMA1 (ENSPTXG00000008476) #30 LRRC30 (ENSPTXG00000008477) PTPRM (ENSPTXG00000008487) #32 RAB12 (ENSPTXG00000016984) #33 MTCL1 (ENSPTXG00000016987) #34 NDUFV2 (ENSPTXG00000016989) ANKRD12 (ENSPTXG00000016991) TWSG1 (ENSPTXG00000016993) RALBP1 (ENSPTXG00000016997) Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 159 ENSNSUG00000006800 ENSNSUG00000006799 EIF2S2 (ENSNSUG00000006794) ASIP (ENSNSUG00000006791) AHCY (ENSNSUG00000006790) ITCH (ENSNSUG00000004770) DYNLRB1 (ENSNSUG00000004757) MAP1LC3A (ENSNSUG00000004753) PIGU (ENSNSUG00000004739) ENSNSUG00000004738 TP53INP2 (ENSNSUG00000004733) NCOA6 (ENSNSUG00000004718) GGT7 (ENSNSUG00000004708) RAB5IF (ENSNSUG00000004702) ENSNSUG00000004699 ENSNSUG00000004694 #22 ENSNSUG00000004693 ENSNSUG00000004692 Mainland tiger snake MODERN SPECIES 40 EMILIN2 (ENSNSUG00000008072) #16 LPIN2 (ENSNSUG00000008141) #17 MYOM1 (ENSNSUG00000008142) #19 ENSNSUG00000008143 ##21 TGIF1 (ENSNSUG00000008144) #22 DLGAP1 (ENSNSUG00000008145) #23 ENSNSUG00000008151 ZBTB14 (ENSNSUG00000008152) #26 EPB41L3 (ENSNSUG00000008154) #27 TMEM200C (ENSNSUG00000008159) ENSNSUG00000008162 ENSNSUG00000008163 #28 LAMA1 (ENSNSUG00000008176) #30 ENSNSUG00000008177 #31 PTPRM (ENSNSUG00000008179) #32 RAB12 (ENSNSUG00000008180) #33 MTCL1 (ENSNSUG00000008181) #34 NDUFV2 (ENSNSUG00000008182) ENSNSUG00000008183 ENSNSUG00000008184 Laterata ANCESTRAL SPECIES 5 ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000018386 #13 ENSGT00390000006950.n #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607.d ##21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT01050000245099 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000161019 ENSGT00940000163916 #31 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00390000017580 ENSGT00940000154742.a.g ENSGT00940000154742.a.h Argentine black and white tegu MODERN SPECIES 4 USP14 (ENSSMRG00000016589) THOC1 (ENSSMRG00000016593) COLEC12 (ENSSMRG00000016596) CLUL1 (ENSSMRG00000016597) TYMS (ENSSMRG00000016598) ENOSF1 (ENSSMRG00000016599) #7 YES1 (ENSSMRG00000016600) #8 ADCYAP1 (ENSSMRG00000016604) #9 METTL4 (ENSSMRG00000016614) #12 ENSSMRG00000016615 #13 SMCHD1 (ENSSMRG00000016617) #15 EMILIN2 (ENSSMRG00000016621) #16 LPIN2 (ENSSMRG00000016622) #17 MYOM1 (ENSSMRG00000016623) #19 ENSSMRG00000016626 ##21 TGIF1 (ENSSMRG00000016627) #22 ENSSMRG00000016628 DLGAP1 (ENSSMRG00000016629) #23 ENSSMRG00000016631 ZBTB14 (ENSSMRG00000016632) #26 EPB41L3 (ENSSMRG00000016633) #27 TMEM200C (ENSSMRG00000016635) ARHGAP28 (ENSSMRG00000016636) #28 LAMA1 (ENSSMRG00000016637) #30 ENSSMRG00000017057 #31 PTPRM (ENSSMRG00000017110) #32 ENSSMRG00000017150 RAB12 (ENSSMRG00000000028) #33 MTCL1 (ENSSMRG00000000059) #34 NDUFV2 (ENSSMRG00000000263) ENSSMRG00000000290 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 14 EIF2S2 (ENSPMRG00000020795) ASIP (ENSPMRG00000020805) ENSPMRG00000020811 AHCY (ENSPMRG00000020815) ITCH (ENSPMRG00000020827) DYNLRB1 (ENSPMRG00000020841) PIGU (ENSPMRG00000020849) MAP1LC3A (ENSPMRG00000020853) ENSPMRG00000020858 TP53INP2 (ENSPMRG00000020864) NCOA6 (ENSPMRG00000020876) GGT7 (ENSPMRG00000020902) ENSPMRG00000020913 RAB5IF (ENSPMRG00000020921) MYL9 (ENSPMRG00000020929) ENSPMRG00000020934 #22 DLGAP4 (ENSPMRG00000020941) ENSPMRG00000020955 AAR2 (ENSPMRG00000020958) ENSPMRG00000020966 EPB41L1 (ENSPMRG00000020983) ENSPMRG00000021067 L3MBTL1 (ENSPMRG00000021072) SGK2 (ENSPMRG00000021090) IFT52 (ENSPMRG00000021100) MYBL2 (ENSPMRG00000021111) ENSPMRG00000021127 ENSPMRG00000021133 ENSPMRG00000021138 PTPRT (ENSPMRG00000021164) ENSPMRG00000021294 Common wall lizard MODERN SPECIES 15 THOC1 (ENSPMRG00000005726) CLUL1 (ENSPMRG00000005750) TYMS (ENSPMRG00000005762) ENOSF1 (ENSPMRG00000005780) #7 YES1 (ENSPMRG00000005808) #8 ADCYAP1 (ENSPMRG00000005832) #9 METTL4 (ENSPMRG00000005852) #12 NDC80 (ENSPMRG00000005868) #13 SMCHD1 (ENSPMRG00000005912) #15 EMILIN2 (ENSPMRG00000006032) #16 LPIN2 (ENSPMRG00000006055) #17 ENSPMRG00000006094 MYOM1 (ENSPMRG00000006111) #19 ENSPMRG00000006137 ##21 ENSPMRG00000006141 TGIF1 (ENSPMRG00000006145) #22 DLGAP1 (ENSPMRG00000006151) #23 ENSPMRG00000006183 ZBTB14 (ENSPMRG00000006191) #26 EPB41L3 (ENSPMRG00000006201) #27 TMEM200C (ENSPMRG00000006235) ENSPMRG00000006240 ENSPMRG00000006246 #28 ENSPMRG00000006249 ENSPMRG00000006253 #28 LAMA1 (ENSPMRG00000006273) #30 LRRC30 (ENSPMRG00000006332) ENSPMRG00000006335 PTPRM (ENSPMRG00000006368) #32 ENSPMRG00000006553 RAB12 (ENSPMRG00000006557) #33 tuatara DUPLICATION tuatara MODERN SPECIES 618 AHCY (ENSSPUG00000008392) ITCH (ENSSPUG00000008370) DYNLRB1 (ENSSPUG00000008358) MAP1LC3A (ENSSPUG00000008352) PIGU (ENSSPUG00000008335) TP53INP2 (ENSSPUG00000008328) NCOA6 (ENSSPUG00000008311) GGT7 (ENSSPUG00000008256) RAB5IF (ENSSPUG00000008245) MYL9 (ENSSPUG00000008238) ENSSPUG00000008221 #22 DLGAP4 (ENSSPUG00000008215) AAR2 (ENSSPUG00000008171) tuatara DUPLICATION tuatara MODERN SPECIES 1783 METTL4 (ENSSPUG00000009271) #12 NDC80 (ENSSPUG00000009282) #13 ENSSPUG00000009317 SMCHD1 (ENSSPUG00000009345) #15 EMILIN2 (ENSSPUG00000009472) #16 LPIN2 (ENSSPUG00000009736) #17 MYOM1 (ENSSPUG00000009777) #19 ENSSPUG00000009881 ##21 ENSSPUG00000009914 ##21 ENSSPUG00000009921 #22 DLGAP1 (ENSSPUG00000009962) #23 AKAIN1 (ENSSPUG00000010070) #25 ENSSPUG00000010077 ZBTB14 (ENSSPUG00000010087) #26 EPB41L3 (ENSSPUG00000010118) #27 tuatara MODERN SPECIES 1953 DCLK2 (ENSSPUG00000014082) LRBA (ENSSPUG00000014182) MAB21L2 (ENSSPUG00000014351) RPS3A (ENSSPUG00000014357) SH3D19 (ENSSPUG00000014397) FHIP1A (ENSSPUG00000014419) GATB (ENSSPUG00000014453) ENSSPUG00000014506 #22 FBXW7 (ENSSPUG00000014517) ENSSPUG00000014535 TMEM154 (ENSSPUG00000014538) ARFIP1 (ENSSPUG00000014560) FHDC1 (ENSSPUG00000014609) TRIM2 (ENSSPUG00000014628) MND1 (ENSSPUG00000014651) TMEM131L (ENSSPUG00000014782) ENSSPUG00000014856 ENSSPUG00000014870 RNF175 (ENSSPUG00000014894) SFRP2 (ENSSPUG00000014918) ENSSPUG00000014941 Anura ANCESTRAL SPECIES 1 ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00950000183074.A ENSGT00530000063668.A ENSGT00390000014786 ENSGT00390000014290 #7 ENSGT00940000154920 #8 ENSGT00950000183154.b.a.b #9 ENSGT00390000016237 #12 ENSGT00390000006950 #15 ENSGT01030000234633.B.a #16 ENSGT00940000156313 #17 ENSGT00940000154982 #19 ENSGT00940000153607 #21 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a #26 ENSGT00940000157047 #27 ENSGT00530000063698.a.b ENSGT00940000158929 #28 ENSGT00940000157124 #30 ENSGT00940000163916 #31 ENSGT00940000155020 #32 ENSGT00940000159325 #33 ENSGT00950000182982.A #34 ENSGT00940000166845 ENSGT00390000017580 ENSGT00940000154742.a ENSGT00390000007058 ENSGT00940000154639 Frog MODERN SPECIES 6 usp14 (ENSXETG00000003152) ENSXETG00000041690 thoc1 (ENSXETG00000003155) colec12 (ENSXETG00000003154) clul1 (ENSXETG00000036167) tyms (ENSXETG00000003156) enosf1 (ENSXETG00000003158) #7 yes1 (ENSXETG00000019176) #8 adcyap1 (ENSXETG00000039137) #9 mettl4 (ENSXETG00000037053) #12 smchd1 (ENSXETG00000001609) #15 emilin2 (ENSXETG00000001613) #16 lpin2 (ENSXETG00000001617) #17 myom1 (ENSXETG00000001619) #19 myl12b (ENSXETG00000025009) #21 tgif1 (ENSXETG00000046401) #22 dlgap1 (ENSXETG00000033741) #23 ENSXETG00000043658 zbtb14 (ENSXETG00000002279) #26 epb41l3 (ENSXETG00000004959) #27 ENSXETG00000049119 tmem200c (ENSXETG00000037936) ENSXETG00000043421 ENSXETG00000004957 #28 lama1 (ENSXETG00000004956) #30 lrrc30 (ENSXETG00000025023) #31 ptprm (ENSXETG00000004287) #32 rab12 (ENSXETG00000004289) #33 MTCL1 (ENSXETG00000004290) #34 acss2.2 (ENSXETG00000004291) ENSXETG00000047385 Leishan spiny toad MODERN SPECIES 8 CLUL1 (ENSLLEG00000019704) ENSLLEG00000019880 ENSLLEG00000019921 ENOSF1 (ENSLLEG00000020156) #7 YES1 (ENSLLEG00000020600) #8 ADCYAP1 (ENSLLEG00000020917) #9 ENSLLEG00000021008 ENSLLEG00000021053 METTL4 (ENSLLEG00000021094) #12 SMCHD1 (ENSLLEG00000021224) #15 EMILIN2 (ENSLLEG00000022020) #16 LPIN2 (ENSLLEG00000022166) #17 MYOM1 (ENSLLEG00000022820) #19 ENSLLEG00000023832 #21 ENSLLEG00000023887 TGIF1 (ENSLLEG00000023912) #22 DLGAP1 (ENSLLEG00000023955) #23 ENSLLEG00000024169 ENSLLEG00000024211 ENSLLEG00000024225 ZBTB14 (ENSLLEG00000024248) #26 EPB41L3 (ENSLLEG00000024445) #27 ENSLLEG00000025963 ENSLLEG00000025986 ENSLLEG00000014630 ENSLLEG00000014682 ENSLLEG00000014770 TMEM200C (ENSLLEG00000014826) ARHGAP28 (ENSLLEG00000014865) #28 LAMA1 (ENSLLEG00000015205) #30 ENSLLEG00000015799 #31 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 429 ENSLACG00000017030 ENSLACG00000016335 EMILIN3 (ENSLACG00000016208) ##16 ENSLACG00000015983 MYL9 (ENSLACG00000015822) ENSLACG00000015647 #22 DLGAP4 (ENSLACG00000014794) ENSLACG00000014011 ENSLACG00000012439 ENSLACG00000011646 AAR2 (ENSLACG00000011312) EPB41L1 (ENSLACG00000022299) SRSF6 (ENSLACG00000005466) L3MBTL1 (ENSLACG00000003590) SGK2 (ENSLACG00000001395) Coelacanth MODERN SPECIES 640 METTL4 (ENSLACG00000015273) #12 SMCHD1 (ENSLACG00000014176) #15 ENSLACG00000014064 EMILIN2 (ENSLACG00000013248) #16 LPIN2 (ENSLACG00000012922) #17 MYOM1 (ENSLACG00000011081) #19 myl12.2 (ENSLACG00000010656) #21 TGIF1 (ENSLACG00000009903) #22 DLGAP1 (ENSLACG00000006045) #23 Actinopterygii ANCESTRAL SPECIES 185 ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B.c.b ENSGT00940000162507.B ENSGT00940000155308 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a.h #26 ENSGT00940000155458 ENSGT00940000160046 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00940000159708 ENSGT00940000155448 ENSGT00940000158442 ENSGT00390000002635 ENSGT00950000183154.b.b ##9 ENSGT00940000169850 ENSGT00940000160361 ENSGT01100000263545.a.b.c.a Neopterygii ANCESTRAL SPECIES 44 ENSGT00950000183131.a ENSGT00940000157014 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT01050000244866.D.b.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B.c.b ENSGT00940000162507.B ENSGT01050000244866.B.c.a ENSGT00940000165533 ENSGT00940000155308 ENSGT00940000155230 #22 ENSGT00940000156220 #23 ENSGT00940000158052.a.h #26 ENSGT00940000155458 ENSGT00940000160046 ENSGT00940000156091.b ENSGT00390000011581 ENSGT00940000153776.a.b ENSGT00940000159708 ENSGT00940000156213 ENSGT00940000158442 ENSGT00390000002635 ENSGT00950000183154.b.b ##9 ENSGT00940000169850 ENSGT00940000160361 ENSGT01100000263545.a.b.c.a Osteoglossocephalai ANCESTRAL SPECIES 67 ENSGT00950000183131.a.f ENSGT00940000157014 ENSGT00390000000546 ENSGT00390000001562 ENSGT00940000159472 ENSGT01050000244866.D.b.a ENSGT00390000006931 ENSGT00940000159381 ENSGT00390000009748 ENSGT00950000183094.b.a ENSGT01050000244866.B.c.b ENSGT00940000162507.B ENSGT01050000244866.B.c.a ENSGT00940000165533 ENSGT00940000155308.d ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT00940000155458 ENSGT00940000160046 ENSGT00390000016807 ENSGT00390000000903.b.a ENSGT01050000244850.A.b.b ENSGT00940000159178 ENSGT00940000161154.a ENSGT00950000183042.b.b ENSGT00940000160913 ENSGT00940000156977.e ENSGT00940000153110.B.e.b ENSGT00940000164258 ENSGT00940000159659.d.b ENSGT00390000018852 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 756 ENSGT00940000155230.a #22 ENSGT00940000155458.c.b Asian bonytongue MODERN SPECIES 10 ndufb11 (ENSSFOG00015032071) uba1 (ENSSFOG00015014366) SLC7A5 (ENSSFOG00015014487) ENSSFOG00015014510 NECAB3 (ENSSFOG00015014544) itcha (ENSSFOG00015014587) znf341 (ENSSFOG00015014678) pxmp4 (ENSSFOG00015014711) E2F1 (ENSSFOG00015014719) ctnnbl1 (ENSSFOG00015014743) VSTM2L (ENSSFOG00015014771) TTI1 (ENSSFOG00015014779) tgm2a (ENSSFOG00015014823) ENSSFOG00015015078 DLGAP4 (ENSSFOG00015015142) ENSSFOG00015025668 #22 myl9b (ENSSFOG00015028858) ENSSFOG00015032159 tpra1 (ENSSFOG00015015214) chchd6a (ENSSFOG00015015245) PLXNA1 (ENSSFOG00015015272) txnrd3 (ENSSFOG00015015359) CHST13 (ENSSFOG00015015388) ENSSFOG00015015400 KLF15 (ENSSFOG00015026322) ENSSFOG00015015452 CPNE9 (ENSSFOG00015031295) LHFPL4 (ENSSFOG00015015498) si:dkey-19e4.5 (ENSSFOG00015015536) ENSSFOG00015015635 ENSSFOG00015032521 Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES ENSGT00940000155230.b.a #22 P. kingsleyae MODERN SPECIES 76 ESYT2 (ENSPKIG00000012586) PTPRN2 (ENSPKIG00000012632) ENSPKIG00000012679 ube3c (ENSPKIG00000012730) ENSPKIG00000012829 SHH (ENSPKIG00000012845) ENSPKIG00000012865 cnpy1 (ENSPKIG00000012889) en2b (ENSPKIG00000012903) insig1 (ENSPKIG00000012927) HTR5A (ENSPKIG00000012962) paxip1 (ENSPKIG00000012980) ENSPKIG00000013047 ENSPKIG00000013146 ptf1a (ENSPKIG00000013159) ENSPKIG00000013177 #22 dlgap1a (ENSPKIG00000013226) #23 ACKR4 (ENSPKIG00000013325) MYRIP (ENSPKIG00000013371) ENSPKIG00000013441 ENSPKIG00000013463 ENSPKIG00000013485 ENSPKIG00000013510 nmnat1 (ENSPKIG00000013546) Osteoglossiformes DUPLICATION Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 129 ENSGT00940000156942.q ENSGT00940000158089 ENSGT00940000156086.c ENSGT00940000154095.b.a.a.a ENSGT00940000154205 ENSGT00940000156321 ENSGT00940000160059.a.a.a ENSGT00940000159119.b.c ENSGT00940000161119 ENSGT00940000159935.e ENSGT00580000081600.c.a.f.a ENSGT01010000222287.B.a.b.a.f ENSGT00940000155757 ENSGT00940000156098.b.i.b ENSGT00940000161000 ENSGT00940000155230.b.b.a.a #22 ENSGT00940000156220.l #23 Asian bonytongue MODERN SPECIES 22 zmynd11 (ENSSFOG00015003470) vipr2 (ENSSFOG00015003570) ESYT2 (ENSSFOG00015003837) PTPRN2 (ENSSFOG00015003927) DNAJB6 (ENSSFOG00015003963) ube3c (ENSSFOG00015003988) SHH (ENSSFOG00015004140) cnpy1 (ENSSFOG00015004163) en2b (ENSSFOG00015004175) ENSSFOG00015032573 HTR5A (ENSSFOG00015004242) paxip1 (ENSSFOG00015004264) ENSSFOG00015004440 ENSSFOG00015004492 ptf1a (ENSSFOG00015025428) tgif1 (ENSSFOG00015027506) #22 dlgap1a (ENSSFOG00015004518) #23 wdr37 (ENSSFOG00015004577) ADARB2 (ENSSFOG00015004693) PFKP (ENSSFOG00015005048) pitrm1 (ENSSFOG00015005122) KLF6 (ENSSFOG00015031336) ENSSFOG00015024581 GJD4 (ENSSFOG00015029362) CCNY (ENSSFOG00015005280) CREM (ENSSFOG00015005318) pard3ab (ENSSFOG00015005353) NRP1 (ENSSFOG00015005440) ITGB1 (ENSSFOG00015005810) EPC1 (ENSSFOG00015005879) KIF5B (ENSSFOG00015031652) Osteoglossiformes ANCESTRAL SPECIES 299 ENSGT00390000013743 ENSGT00940000156086.d ENSGT00490000043432 ENSGT00940000166388 ENSGT00940000160059.a.a.b ENSGT00940000153458.A ENSGT00390000007809.b ENSGT00390000003759 ENSGT00940000159119.b.d ENSGT00530000063891 ENSGT00940000159935.f ENSGT00580000081600.c.a.f.b ENSGT01010000222287.B.a.b.a.e ENSGT00940000156098.b.i.a ENSGT00510000049635 ENSGT00940000155230.b.b.a.b #22 ENSGT00940000156220.k #23 ENSGT01100000263537.b.a.a.b.b P. kingsleyae MODERN SPECIES 355 ENSPKIG00000021236 ENSPKIG00000021227 ENSPKIG00000021011 RBM33 (ENSPKIG00000020938) EN2 (ENSPKIG00000020924) INSIG1 (ENSPKIG00000020915) HTR5A (ENSPKIG00000020904) ENSPKIG00000020886 ENSPKIG00000020875 ENSPKIG00000020868 ENSPKIG00000020810 tgif1 (ENSPKIG00000020785) #22 DLGAP1 (ENSPKIG00000020752) #23 ENSPKIG00000020737 Asian bonytongue MODERN SPECIES 24 ESYT2 (ENSSFOG00015003445) ncapg2 (ENSSFOG00015003437) dnajb6b (ENSSFOG00015003350) ENSSFOG00015003319 mnx1 (ENSSFOG00015003272) nom1 (ENSSFOG00015003196) lmbr1 (ENSSFOG00015003105) rnf32 (ENSSFOG00015002959) SHH (ENSSFOG00015027189) RBM33 (ENSSFOG00015028975) EN2 (ENSSFOG00015031674) insig1 (ENSSFOG00015025932) HTR5A (ENSSFOG00015026151) KIAA1217 (ENSSFOG00015002789) OTUD1 (ENSSFOG00015002776) TGIF1 (ENSSFOG00015024748) #22 DLGAP1 (ENSSFOG00015002710) #23 ENSSFOG00015002700 nphp3 (ENSSFOG00015002629) uba5 (ENSSFOG00015002586) ackr4b (ENSSFOG00015028394) acad11 (ENSSFOG00015002459) MYRIP (ENSSFOG00015002436) ENSSFOG00015026098 zfand1 (ENSSFOG00015002402) chmp4c (ENSSFOG00015027269) ENSSFOG00015026603 plxdc2b (ENSSFOG00015025231) malrd1 (ENSSFOG00015002145) arl8 (ENSSFOG00015002122) NSUN6 (ENSSFOG00015001941) Osteoglossiformes DUPLICATION Osteoglossiformes ANCESTRAL SPECIES 17 ENSGT00940000156407 ENSGT00940000160093.a ENSGT00700000104550.a.j.a.a ENSGT00700000104550.a.j.a.b ENSGT00940000158764.e ENSGT00950000182863.A.a.b ENSGT00950000183176.a.a ENSGT00950000183131.a.f ENSGT00940000157014.h ENSGT01050000244866.D.b.a ENSGT00940000159381.b ENSGT00950000183094.b.a.p ENSGT01050000244866.B.c.a ENSGT00940000165533.a ENSGT00940000155308.d ENSGT00940000155230.b.b.b.a #22 ENSGT00940000155458.c.a ENSGT00940000160046 ENSGT00390000016807.b ENSGT00390000000903.b.a ENSGT01010000223084 ENSGT01050000244850.A.b.a.a ENSGT00940000159178.b.a ENSGT00940000161154.a ENSGT00950000183042.b.b.h ENSGT00950000183042.b.a ENSGT00940000160913 ENSGT00940000156977.e.b ENSGT00940000153110.B.e.a.a ENSGT00940000164258 ENSGT00940000159659.d.a P. kingsleyae MODERN SPECIES 308 RALGAPB (ENSPKIG00000010870) tox2 (ENSPKIG00000010730) SNTA1 (ENSPKIG00000010628) cbfa2t2 (ENSPKIG00000010565) ITCH (ENSPKIG00000010515) tgm5l (ENSPKIG00000010469) VSTM2L (ENSPKIG00000010454) RPRD1B (ENSPKIG00000010430) tgm2b (ENSPKIG00000010396) DLGAP4 (ENSPKIG00000010318) ENSPKIG00000010277 #22 myl9b (ENSPKIG00000010247) LPIN3 (ENSPKIG00000010167) tpra1 (ENSPKIG00000010098) ENSPKIG00000010064 Asian bonytongue MODERN SPECIES 14 tox2 (ENSSFOG00015020204) SNTA1 (ENSSFOG00015020141) cbfa2t2 (ENSSFOG00015020083) ENSSFOG00015031799 ENSSFOG00015025239 ITCH (ENSSFOG00015019968) tgm5l (ENSSFOG00015019930) VSTM2L (ENSSFOG00015019919) rprd1b (ENSSFOG00015019874) tgm2b (ENSSFOG00015019841) ENSSFOG00015019791 ENSSFOG00015019751 ENSSFOG00015032394 ENSSFOG00015031459 DLGAP4 (ENSSFOG00015019695) ENSSFOG00015019684 #22 myl9b (ENSSFOG00015019678) LPIN3 (ENSSFOG00015019641) tpra1 (ENSSFOG00015032751) chchd6b (ENSSFOG00015019571) PLXNA1 (ENSSFOG00015019458) txnrd3 (ENSSFOG00015027236) ENSSFOG00015019395 ENSSFOG00015025913 txnrd3 (ENSSFOG00015019409) ENSSFOG00015033057 SLC41A3 (ENSSFOG00015019368) ENSSFOG00015019272 KLF15 (ENSSFOG00015019262) ENSSFOG00015019248 ENSSFOG00015019224 Osteoglossiformes ANCESTRAL SPECIES 12 ENSGT00940000155308.c ENSGT00940000155230.b.b.b.b #22 ENSGT00390000016807.a ENSGT00390000000903.b.b ENSGT01050000244850.A.b.a.b ENSGT00940000159178.b.b ENSGT00940000161154.b ENSGT00950000183042.b.b.g ENSGT00940000156977.e.a ENSGT00940000153110.B.e.a.b ENSGT00940000159659.c.a ENSGT00940000165995.g ENSGT01020000230394.e.a.a.b.a.a.b.a.a.l ENSGT00940000166426 ENSGT00940000161090.B.c.b.a.d ENSGT00940000161090.B.c.a.a ENSGT00940000163961.a.a.a P. kingsleyae MODERN SPECIES 288 ENSPKIG00000007743 DLGAP4 (ENSPKIG00000007793) ENSPKIG00000007893 ENSPKIG00000007906 ENSPKIG00000007916 #22 ENSPKIG00000007936 tpra1 (ENSPKIG00000007955) chchd6a (ENSPKIG00000007988) PLXNA1 (ENSPKIG00000008035) Clupeocephala ANCESTRAL SPECIES 93 ENSGT00940000157567 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159935.g.a ENSGT00940000161119 ENSGT00530000063891.bc.b ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000165657 ENSGT00950000185351 ENSGT00940000153458.A ENSGT00940000160059.a.a Euteleosteomorpha ANCESTRAL SPECIES 31 ENSGT00940000157567 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000165657 ENSGT00950000185351 ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b Protacanthopterygii ANCESTRAL SPECIES 49 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT00940000164390.e ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398.f ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.bc.b ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A.e ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Northern pike DUPLICATION Northern pike MODERN SPECIES 20 DYNC2I1 (ENSELUG00000005162) ESYT2 (ENSELUG00000005192) ncapg2 (ENSELUG00000005235) dnajb6b (ENSELUG00000005338) chmp4c (ENSELUG00000024826) zfand1 (ENSELUG00000005432) ENSELUG00000005458 myripb (ENSELUG00000005478) ugt2b5 (ENSELUG00000005505) acad11 (ENSELUG00000005591) ackr4b (ENSELUG00000005536) uba5 (ENSELUG00000000155) nphp3 (ENSELUG00000005679) ENSELUG00000005700 ENSELUG00000005880 tgif1 (ENSELUG00000005964) #22 DLGAP1 (ENSELUG00000005998) #23 ENSELUG00000025952 fabp4a (ENSELUG00000006015) htr5ab (ENSELUG00000006032) insig1 (ENSELUG00000006042) en2a (ENSELUG00000006065) RBM33 (ENSELUG00000006088) shha (ENSELUG00000006116) rnf32 (ENSELUG00000006137) lmbr1 (ENSELUG00000006220) nom1 (ENSELUG00000006266) mnx1 (ENSELUG00000006275) ube3c (ENSELUG00000006363) ENSELUG00000006434 puf60b (ENSELUG00000006507) Northern pike MODERN SPECIES 16 ENSELUG00000012041 eif4bb (ENSELUG00000011962) krt18b (ENSELUG00000011941) krt4 (ENSELUG00000011913) zgc:158846 (ENSELUG00000032891) ENSELUG00000028860 ENSELUG00000028903 ENSELUG00000024885 ENSELUG00000026777 ENSELUG00000034466 ENSELUG00000027911 VSTM2L (ENSELUG00000011818) tgm2b (ENSELUG00000011784) quo (ENSELUG00000011735) DLGAP4 (ENSELUG00000011678) ENSELUG00000011622 #22 myl9a (ENSELUG00000011604) ENSELUG00000011557 ENSELUG00000001359 tpra1 (ENSELUG00000011526) chchd6b (ENSELUG00000011503) PLXNA1 (ENSELUG00000011440) ENSELUG00000032058 ENSELUG00000011317 ENSELUG00000011284 EVC (ENSELUG00000011280) EVC2 (ENSELUG00000011257) CYTL1 (ENSELUG00000011229) msx1a (ENSELUG00000011216) stx18 (ENSELUG00000011193) NSG1 (ENSELUG00000011153) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 274 ENSGT00390000005489.c ENSGT00950000183138.a.a.b.u.c.b.a ENSGT01030000234667.a.a.a.b.a.a ENSGT00940000160993 ENSGT00940000156177.f ENSGT01100000263537.b.a.a.b.b.b ENSGT00940000156098.a.j ENSGT00510000049635.d ENSGT00940000155230.e.a #22 ENSGT00940000156220.k.a #23 ENSGT00940000164547.b.a.h ENSGT01010000222287.B.a.b.a.l ENSGT00580000081600.c.a.c ENSGT00940000159935.g.b.a ENSGT00530000063891.bc.a ENSGT00940000159119.b.f.a.d ENSGT00390000007809.b.b ENSGT00940000153458.A.f ENSGT00940000160059.a.a.c ENSGT00940000156321.i.a ENSGT00940000166388.b ENSGT00940000154095.b.a.a.b.d ENSGT00490000043432.i ENSGT00940000156086.d.b Salmoninae_a ANCESTRAL SPECIES 32 ENSGT00950000183074.A.a.a.a ENSGT00530000062962.a.b.f ENSGT00390000015525.a.a ENSGT00950000182837.a.b.a.l ENSGT00940000155370.d ENSGT00440000033408.a.a.b ENSGT00940000162556.B.c ENSGT00390000005489.c ENSGT00950000183138.a.a.b.u.c.b.a ENSGT01030000234667.a.a.a.b.a.a ENSGT00940000160993 ENSGT00940000156177.f ENSGT01100000263537.b.a.a.b.b.b ENSGT00940000156098.a.j ENSGT00510000049635.d ENSGT00940000155230.e.a #22 ENSGT00940000156220.k.a #23 ENSGT00940000164547.b.a.h ENSGT01010000222287.B.a.b.a.l ENSGT00580000081600.c.a.c ENSGT00940000159935.g.b.a ENSGT00530000063891.bc.a ENSGT00940000159119.b.f.a.d ENSGT00390000007809.b.b ENSGT00940000153458.A.f ENSGT00940000160059.a.a.c ENSGT00940000156321.i.a ENSGT00940000166388.b ENSGT00940000154095.b.a.a.b.d ENSGT00490000043432.i ENSGT00940000156086.d.b Salmo ANCESTRAL SPECIES 3 ENSGT00530000062962.a.b.f ENSGT00390000015525.a.a ENSGT00950000182837.a.b.a.l ENSGT00940000155370.d ENSGT00440000033408.a.a.b ENSGT00940000162556.B.c ENSGT00390000005489.c ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00950000183138.a.a.b.u.c.a.a ENSGT01030000234667.a.a.a.b.a.a ENSGT00940000160993 ENSGT00940000156177.f ENSGT01100000263537.b.a.a.b.b.b ENSGT00940000156098.a.j ENSGT00510000049635.d ENSGT00940000155230.e.a #22 ENSGT00940000156220.k.a #23 ENSGT00940000164547.b.a.h ENSGT01010000222287.B.a.b.a.l ENSGT00580000081600.c.a.c ENSGT00940000159935.g.b.a ENSGT00530000063891.bc.a ENSGT00940000159119.b.f.a.d ENSGT00390000007809.b.b ENSGT00940000153458.A.f ENSGT00940000160059.a.a.c ENSGT00940000156321.i.a ENSGT00940000166388.b ENSGT00940000154095.b.a.a.b.d ENSGT00490000043432.i ENSGT00940000156086.d.b River trout MODERN SPECIES 11 COLEC12 (ENSSTUG00000015645) hacd1 (ENSSTUG00000015625) ENSSTUG00000015615 CACNB2 (ENSSTUG00000015348) plxdc2b (ENSSTUG00000015057) ENSSTUG00000015023 ENSSTUG00000015012 myripb (ENSSTUG00000014991) ENSSTUG00000014981 ackr4b (ENSSTUG00000014957) acad11 (ENSSTUG00000013842) uba5 (ENSSTUG00000013621) ENSSTUG00000013604 ENSSTUG00000013475 ENSSTUG00000013432 tgif1 (ENSSTUG00000013424) #22 DLGAP1 (ENSSTUG00000013317) #23 fabp4a (ENSSTUG00000013290) HTR5A (ENSSTUG00000013284) insig1 (ENSSTUG00000013244) en2a (ENSSTUG00000013234) RBM33 (ENSSTUG00000013219) shha (ENSSTUG00000013205) lmbr1 (ENSSTUG00000013148) nom1 (ENSSTUG00000013057) mnx1 (ENSSTUG00000013044) ube3c (ENSSTUG00000012878) dnajb6b (ENSSTUG00000012826) ptprn2 (ENSSTUG00000012619) ncapg2 (ENSSTUG00000012332) ESYT2 (ENSSTUG00000010481) Atlantic salmon MODERN SPECIES 10 ENSSSAG00000070680 ENSSSAG00000070671 ENSSSAG00000070669 CACNB2 (ENSSSAG00000064266) ENSSSAG00000064158 PLXDC2 (ENSSSAG00000063291) ENSSSAG00000063280 ENSSSAG00000063161 ENSSSAG00000063147 ackr4b (ENSSSAG00000063130) ENSSSAG00000061717 ENSSSAG00000062871 ENSSSAG00000108151 ENSSSAG00000061293 ENSSSAG00000061254 tgif1 (ENSSSAG00000101993) #22 ENSSSAG00000092337 ENSSSAG00000061192 #23 HTR5A (ENSSSAG00000060915) ENSSSAG00000065775 insig1 (ENSSSAG00000109404) en2a (ENSSSAG00000119159) RBM33 (ENSSSAG00000060833) shha (ENSSSAG00000095830) lmbr1 (ENSSSAG00000068390) ENSSSAG00000060423 mnx1 (ENSSSAG00000094921) ube3c (ENSSSAG00000056324) dnajb6b (ENSSSAG00000056237) ENSSSAG00000098744 ptprn2 (ENSSSAG00000056121) Oncorhynchus ANCESTRAL SPECIES 28 ENSGT00390000014290.h #7 ENSGT00390000014786.d ENSGT00950000183074.A.a.a.a ENSGT00530000062962.a.b.f ENSGT00390000015525.a.a ENSGT00950000182837.a.b.a.l ENSGT00440000033408.a.a.b ENSGT00940000162556.B.c ENSGT00730000111180.n ENSGT00390000005489.c ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00940000160993.j ENSGT00940000156177.f ENSGT00940000156098.a.j ENSGT00510000049635.d ENSGT00940000155230.e.a #22 ENSGT00940000156220.k.a #23 ENSGT00940000164547.b.a.h ENSGT01010000222287.B.a.b.a.l ENSGT00580000081600.c.a.c ENSGT00940000159935.g.b.a ENSGT00530000063891.bc.a ENSGT00940000159119.b.f.a.d ENSGT00390000007809.b.b ENSGT00940000153458.A.f ENSGT00940000160059.a.a.c ENSGT00940000156321.i.a ENSGT00940000166388.b ENSGT00940000154095.b.a.a.b.d ENSGT00490000043432.i ENSGT00940000156086.d.b Rainbow trout MODERN SPECIES 2 ENSOMYG00000017553 ENSOMYG00000016744 ENSOMYG00000016710 ENSOMYG00000016706 ENSOMYG00000070983 ENSOMYG00000016529 myripb (ENSOMYG00000016491) ackr4b (ENSOMYG00000016487) ENSOMYG00000057188 ENSOMYG00000066518 acad11 (ENSOMYG00000016304) ENSOMYG00000016152 ENSOMYG00000050402 ENSOMYG00000015994 ENSOMYG00000015965 tgif1 (ENSOMYG00000053037) #22 ENSOMYG00000015668 #23 HTR5A (ENSOMYG00000015610) insig1 (ENSOMYG00000015581) en2a (ENSOMYG00000015608) RBM33 (ENSOMYG00000015556) shha (ENSOMYG00000015548) lmbr1 (ENSOMYG00000015290) mnx1 (ENSOMYG00000015224) ube3c (ENSOMYG00000015205) dnajb6b (ENSOMYG00000015187) ENSOMYG00000056802 ptprn2 (ENSOMYG00000015099) ncapg2 (ENSOMYG00000015032) ESYT2 (ENSOMYG00000014123) ENSOMYG00000073406 Oncorhynchus_a ANCESTRAL SPECIES 23 ENSGT00390000014290.h #7 ENSGT00390000014786.d ENSGT00950000183074.A.a.a.a ENSGT00530000062962.a.b.f ENSGT00390000015525.a.a ENSGT00950000182837.a.b.a.l ENSGT00440000033408.a.a.b ENSGT00940000162556.B.c ENSGT00730000111180.n ENSGT00390000005489.c ENSGT00950000183138.a.a.b.u.c.b.a ENSGT00940000160993.j ENSGT00940000156177.f ENSGT00940000156098.a.j ENSGT00510000049635.d ENSGT00940000155230.e.a #22 ENSGT00940000156220.k.a #23 ENSGT00940000164547.b.a.h ENSGT01010000222287.B.a.b.a.l ENSGT00580000081600.c.a.c ENSGT00940000159935.g.b.a ENSGT00530000063891.bc.a ENSGT00940000159119.b.f.a.d ENSGT00390000007809.b.b ENSGT00940000153458.A.f ENSGT00940000160059.a.a.c ENSGT00940000156321.i.a ENSGT00940000166388.b ENSGT00940000154095.b.a.a.b.d ENSGT00490000043432.i ENSGT00940000156086.d.b Coho salmon MODERN SPECIES 9 ENSOKIG00005020324 COLEC12 (ENSOKIG00005020363) hacd1 (ENSOKIG00005020384) ENSOKIG00005020391 CACNB2 (ENSOKIG00005020455) ENSOKIG00005020730 ENSOKIG00005020849 ENSOKIG00005020864 ENSOKIG00005020886 ENSOKIG00005020897 myripb (ENSOKIG00005020920) acad11 (ENSOKIG00005021003) UBA5 (ENSOKIG00005021305) ENSOKIG00005021447 ENSOKIG00005021634 tgif1 (ENSOKIG00005021657) #22 DLGAP1 (ENSOKIG00005021703) #23 HTR5A (ENSOKIG00005021908) insig1 (ENSOKIG00005021920) en2a (ENSOKIG00005021930) RBM33 (ENSOKIG00005021936) shha (ENSOKIG00005021947) lmbr1 (ENSOKIG00005021988) ENSOKIG00005022875 mnx1 (ENSOKIG00005022901) ube3c (ENSOKIG00005022930) dnajb6b (ENSOKIG00005023022) ptprn2 (ENSOKIG00005023061) ncapg2 (ENSOKIG00005023148) ESYT2 (ENSOKIG00005023375) maf1b (ENSOKIG00005025884) Chinook salmon MODERN SPECIES 7 tyms (ENSOTSG00005009365) COLEC12 (ENSOTSG00005009364) hacd1 (ENSOTSG00005009363) ENSOTSG00005009362 ENSOTSG00005009361 CACNB2 (ENSOTSG00005005494) ENSOTSG00005005468 ENSOTSG00005005465 plxdc2b (ENSOTSG00005005277) ENSOTSG00005005276 ENSOTSG00005005275 acad11 (ENSOTSG00005003111) uba5 (ENSOTSG00005002808) ENSOTSG00005002786 ENSOTSG00005002778 tgif1 (ENSOTSG00005002774) #22 DLGAP1 (ENSOTSG00005002169) #23 fabp4a (ENSOTSG00005044844) HTR5A (ENSOTSG00005044843) insig1 (ENSOTSG00005044841) RBM33 (ENSOTSG00005044839) shha (ENSOTSG00005044838) lmbr1 (ENSOTSG00005044837) ENSOTSG00005044836 mnx1 (ENSOTSG00005044835) ube3c (ENSOTSG00005044820) dnajb6b (ENSOTSG00005044819) ncapg2 (ENSOTSG00005044616) ESYT2 (ENSOTSG00005044594) maf1b (ENSOTSG00005044585) F13A1 (ENSOTSG00005044579) Huchen MODERN SPECIES 415 ENSHHUG00000018221 ENSHHUG00000018218 ackr4b (ENSHHUG00000018192) acad11 (ENSHHUG00000018009) uba5 (ENSHHUG00000017933) ENSHHUG00000017927 ENSHHUG00000017827 ENSHHUG00000017820 tgif1 (ENSHHUG00000017812) #22 DLGAP1 (ENSHHUG00000017574) #23 Salmoninae ANCESTRAL SPECIES 88 ENSGT00940000165597 ENSGT00440000033408.a.a.a ENSGT00940000162556.B.d ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489.d ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00940000164390.e ENSGT01030000234667.a.a.a.b.a.b ENSGT01010000230021 ENSGT00940000156177.e ENSGT00940000156398.f ENSGT01100000263537.b.a.a.b.b.a ENSGT00940000156098.a.i ENSGT00510000049635.c ENSGT00940000155230.e.b #22 ENSGT00940000156220.k.b #23 ENSGT01010000222287.B.a.b.a.k ENSGT00580000081600.c.a.d ENSGT00940000159935.g.b.b ENSGT00530000063891.bc.b ENSGT00940000159119.b.f.a.c ENSGT00390000003759 ENSGT00390000007809.b.a ENSGT00940000153458.A.e ENSGT00940000160059.a.a.d ENSGT00940000156321.i.b ENSGT00940000166388.a ENSGT00940000154095.b.a.a.b.c ENSGT00490000043432.j ENSGT00940000156086.d.a Huchen MODERN SPECIES 376 tgif1 (ENSHHUG00000034065) #22 DLGAP1 (ENSHHUG00000034072) #23 HTR5A (ENSHHUG00000034218) insig1 (ENSHHUG00000034222) en2a (ENSHHUG00000034235) ENSHHUG00000034244 RBM33 (ENSHHUG00000034246) shha (ENSHHUG00000034251) rnf32 (ENSHHUG00000034255) lmbr1 (ENSHHUG00000034266) nom1 (ENSHHUG00000034274) mnx1 (ENSHHUG00000034280) ube3c (ENSHHUG00000034290) Salmoninae_a ANCESTRAL SPECIES 69 ENSGT00940000165597 ENSGT00440000033408.a.a.a ENSGT00940000162556.B.d ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489.d ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00940000164390.e ENSGT01030000234667.a.a.a.b.a.b ENSGT01010000230021 ENSGT00940000156177.e ENSGT00940000156398.f ENSGT01100000263537.b.a.a.b.b.a ENSGT00940000156098.a.i ENSGT00510000049635.c ENSGT00940000155230.e.b #22 ENSGT00940000156220.k.b #23 ENSGT01010000222287.B.a.b.a.k ENSGT00580000081600.c.a.d ENSGT00940000159935.g.b.b ENSGT00530000063891.bc.b ENSGT00940000159119.b.f.a.c ENSGT00390000003759 ENSGT00390000007809.b.a ENSGT00940000153458.A.e ENSGT00940000160059.a.a.d ENSGT00940000156321.i.b ENSGT00940000166388.a ENSGT00940000154095.b.a.a.b.c ENSGT00490000043432.j ENSGT00940000156086.d.a Oncorhynchus ANCESTRAL SPECIES 27 ENSGT00940000157567 ENSGT00940000165597 ENSGT00440000033408.a.a.a ENSGT00940000162556.B.d ENSGT00940000159257 ENSGT00730000111180.m ENSGT00390000005489.d ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00940000164390.e ENSGT01030000234667.a.a.a.b.a.b ENSGT00940000156177.e ENSGT00940000156398.f ENSGT01100000263537.b.a.a.b.b.a ENSGT00940000156098.a.i ENSGT00510000049635.c ENSGT00940000155230.e.b #22 ENSGT00940000156220.k.b #23 ENSGT01010000222287.B.a.b.a.k ENSGT00580000081600.c.a.d ENSGT00940000159935.g.b.b ENSGT00530000063891.bc.b ENSGT00940000159119.b.f.a.c ENSGT00390000003759 ENSGT00390000007809.b.a ENSGT00940000153458.A.e ENSGT00940000160059.a.a.d ENSGT00940000156321.i.b ENSGT00940000166388.a ENSGT00940000154095.b.a.a.b.c ENSGT00490000043432.j ENSGT00940000156086.d.a Oncorhynchus_a ANCESTRAL SPECIES 27 ENSGT00940000157567 ENSGT00940000165597 ENSGT00440000033408.a.a.a ENSGT00940000162556.B.d ENSGT00940000159257 ENSGT00730000111180.m ENSGT00390000005489.d ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00940000164390.e ENSGT01030000234667.a.a.a.b.a.b ENSGT00940000156177.e ENSGT00940000156398.f ENSGT01100000263537.b.a.a.b.b.a ENSGT00940000156098.a.i ENSGT00510000049635.c ENSGT00940000155230.e.b #22 ENSGT00940000156220.k.b #23 ENSGT01010000222287.B.a.b.a.k ENSGT00580000081600.c.a.d ENSGT00940000159935.g.b.b ENSGT00530000063891.bc.b.a ENSGT00940000159119.b.f.a.c ENSGT00390000003759 ENSGT00390000007809.b.a ENSGT00940000153458.A.e ENSGT00940000160059.a.a.d ENSGT00940000156321.i.b ENSGT00940000166388.a ENSGT00940000154095.b.a.a.b.c ENSGT00490000043432.j ENSGT00940000156086.d.a Chinook salmon MODERN SPECIES 21 malrd1 (ENSOTSG00005003154) plxdc2b (ENSOTSG00005005120) ENSOTSG00005007921 chmp4c (ENSOTSG00005007923) zfand1 (ENSOTSG00005007927) ENSOTSG00005007929 ENSOTSG00005007930 myripb (ENSOTSG00005007931) ugt2b5 (ENSOTSG00005007932) ackr4b (ENSOTSG00005007933) uba5 (ENSOTSG00005007935) nphp3 (ENSOTSG00005008108) ENSOTSG00005008910 ENSOTSG00005008917 ENSOTSG00005008924 tgif1 (ENSOTSG00005008925) #22 DLGAP1 (ENSOTSG00005008926) #23 HTR5A (ENSOTSG00005009279) insig1 (ENSOTSG00005009280) en2a (ENSOTSG00005009282) ENSOTSG00005009284 ENSOTSG00005009285 shha (ENSOTSG00005009286) rnf32 (ENSOTSG00005009287) lmbr1 (ENSOTSG00005009290) nom1 (ENSOTSG00005009292) mnx1 (ENSOTSG00005009299) ube3c (ENSOTSG00005009300) dnajb6b (ENSOTSG00005010148) ptprn2 (ENSOTSG00005010155) ENSOTSG00005010528 Coho salmon MODERN SPECIES 2 arl8 (ENSOKIG00005034717) malrd1 (ENSOKIG00005034117) plxdc2b (ENSOKIG00005033358) ENSOKIG00005033315 chmp4c (ENSOKIG00005033290) zfand1 (ENSOKIG00005033245) ENSOKIG00005033234 myripb (ENSOKIG00005033214) ENSOKIG00005033143 ackr4b (ENSOKIG00005033132) uba5 (ENSOKIG00005033004) nphp3 (ENSOKIG00005032755) ENSOKIG00005032721 ENSOKIG00005032588 ENSOKIG00005032570 tgif1 (ENSOKIG00005032563) #22 DLGAP1 (ENSOKIG00005032426) #23 HTR5A (ENSOKIG00005032404) insig1 (ENSOKIG00005032390) en2a (ENSOKIG00005032383) RBM33 (ENSOKIG00005032370) shha (ENSOKIG00005032352) rnf32 (ENSOKIG00005032342) lmbr1 (ENSOKIG00005032023) nom1 (ENSOKIG00005031844) mnx1 (ENSOKIG00005031828) ube3c (ENSOKIG00005031367) dnajb6b (ENSOKIG00005031290) ptprn2 (ENSOKIG00005031258) ncapg2 (ENSOKIG00005031197) ESYT2 (ENSOKIG00005030510) Rainbow trout MODERN SPECIES 6 arl8 (ENSOMYG00000020297) malrd1 (ENSOMYG00000020351) plxdc2b (ENSOMYG00000020625) ENSOMYG00000021846 chmp4c (ENSOMYG00000021856) zfand1 (ENSOMYG00000021876) ENSOMYG00000021894 myripb (ENSOMYG00000021907) ENSOMYG00000021918 ACKR4 (ENSOMYG00000021932) uba5 (ENSOMYG00000021988) nphp3 (ENSOMYG00000022140) ENSOMYG00000022307 ENSOMYG00000022481 ENSOMYG00000072666 tgif1 (ENSOMYG00000022897) #22 ENSOMYG00000022930 #23 HTR5A (ENSOMYG00000023049) ENSOMYG00000057666 insig1 (ENSOMYG00000023095) en2a (ENSOMYG00000023115) RBM33 (ENSOMYG00000023138) shha (ENSOMYG00000023151) rnf32 (ENSOMYG00000023166) lmbr1 (ENSOMYG00000023237) ENSOMYG00000065211 nom1 (ENSOMYG00000023280) mnx1 (ENSOMYG00000023390) ube3c (ENSOMYG00000023528) dnajb6b (ENSOMYG00000023999) ptprn2 (ENSOMYG00000024038) Salmo ANCESTRAL SPECIES 34 ENSGT00940000165597 ENSGT00440000033408.a.a.a ENSGT00940000162556.B.d ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489.d ENSGT00950000183138.a.a.b.u.c.b.b ENSGT00940000164390.e ENSGT01030000234667.a.a.a.b.a.b ENSGT01010000230021 ENSGT00940000156177.e ENSGT00940000156398.f ENSGT01100000263537.b.a.a.b.b.a ENSGT00940000156098.a.i ENSGT00510000049635.c ENSGT00940000155230.e.b #22 ENSGT00940000156220.k.b #23 ENSGT01010000222287.B.a.b.a.k ENSGT00580000081600.c.a.d ENSGT00940000159935.g.b.b ENSGT00530000063891.bc.b ENSGT00940000159119.b.f.a.c ENSGT00390000003759 ENSGT00390000007809.b.a ENSGT00940000153458.A.e ENSGT00940000160059.a.a.d ENSGT00940000156321.i.b ENSGT00940000166388.a ENSGT00940000154095.b.a.a.b.c ENSGT00490000043432.j ENSGT00940000156086.d.a River trout MODERN SPECIES 36 ENSSTUG00000003475 malrd1 (ENSSTUG00000003570) plxdc2b (ENSSTUG00000004524) ENSSTUG00000004860 chmp4c (ENSSTUG00000004876) zfand1 (ENSSTUG00000004890) ENSSTUG00000004930 myripb (ENSSTUG00000004935) ENSSTUG00000004963 ackr4b (ENSSTUG00000004981) uba5 (ENSSTUG00000004994) nphp3 (ENSSTUG00000005328) ENSSTUG00000005584 ENSSTUG00000005595 ENSSTUG00000005672 tgif1 (ENSSTUG00000005679) #22 DLGAP1 (ENSSTUG00000005705) #23 HTR5A (ENSSTUG00000006259) insig1 (ENSSTUG00000006281) en2a (ENSSTUG00000006296) RBM33 (ENSSTUG00000006306) shha (ENSSTUG00000006324) rnf32 (ENSSTUG00000006335) lmbr1 (ENSSTUG00000006359) nom1 (ENSSTUG00000006544) mnx1 (ENSSTUG00000006716) ube3c (ENSSTUG00000006738) dnajb6b (ENSSTUG00000007298) ptprn2 (ENSSTUG00000007315) ncapg2 (ENSSTUG00000007461) ESYT2 (ENSSTUG00000007640) Atlantic salmon MODERN SPECIES 21 arl8 (ENSSSAG00000108044) malrd1 (ENSSSAG00000070649) plxdc2b (ENSSSAG00000070397) ENSSSAG00000070377 zfand1 (ENSSSAG00000070361) ENSSSAG00000070358 ENSSSAG00000070345 ackr4b (ENSSSAG00000119256) ENSSSAG00000070347 ENSSSAG00000099495 uba5 (ENSSSAG00000099237) ENSSSAG00000070074 nphp3 (ENSSSAG00000069282) ENSSSAG00000069243 ENSSSAG00000069238 tgif1 (ENSSSAG00000094974) #22 ENSSSAG00000089648 ENSSSAG00000068494 #23 htr5a (ENSSSAG00000068481) insig1 (ENSSSAG00000068477) en2a (ENSSSAG00000085232) RBM33 (ENSSSAG00000068472) shha (ENSSSAG00000082063) rnf32 (ENSSSAG00000068464) ENSSSAG00000118116 lmbr1 (ENSSSAG00000060492) nom1 (ENSSSAG00000068370) mnx1 (ENSSSAG00000096992) ube3c (ENSSSAG00000065903) dnajb6b (ENSSSAG00000065827) ENSSSAG00000105861 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 472 ENSGT01020000230338.a.b.b.a.b.b.b ENSGT00940000159381.d.b ENSGT01050000244866.B.c.a.a ENSGT00940000165533.c.a ENSGT01100000263541.a.a.a.b.b.b.a.b.a.a.a.b ENSGT00940000155308.d.`b ENSGT00940000155230.f.a #22 ENSGT00940000155458.j.b ENSGT00940000160046.a ENSGT00940000165151.b.e ENSGT00390000016807.f ENSGT01050000244850.A.b.a.a.j.o.a.b ENSGT00940000154610.e.b.b.a ENSGT00530000063851.a.b.a ENSGT00390000016221.xb.b ENSGT00940000164716.C.a ENSGT00390000014853.f ENSGT00390000000483.b.e ENSGT00940000158750 ENSGT00390000012901.k ENSGT00940000159350.h ENSGT00940000157037.a.c.a.a Salmoninae_a ANCESTRAL SPECIES 15 ENSGT00940000161154.a.f ENSGT00940000159178.m.a ENSGT00950000182882.A.a.i.a.a ENSGT00940000158061.b.b ENSGT00390000002307.f.b.a.a ENSGT00940000162831 ENSGT00940000159065.b.c.b ENSGT00940000155473.c.b.b ENSGT00940000163886.B.b.b.c.a.b.a.a ENSGT00940000153336.a.b.b ENSGT00940000163961.a.b.a ENSGT00940000161090.B.c.a.b.e ENSGT00940000161090.B.c.b.a.a.b ENSGT01100000263541.a.a.a.b.b.b.a.b.a.a.a.b ENSGT00940000155308.d.`b ENSGT00940000155230.f.a #22 ENSGT00940000155458.j.b ENSGT00940000160046.a ENSGT00940000165151.b.e ENSGT00390000016807.f ENSGT01050000244850.A.b.a.a.j.o.a.b ENSGT00940000154610.e.b.b.a ENSGT00530000063851.a.b.a ENSGT00390000016221.xb.b ENSGT00940000164716.C.a ENSGT00390000014853.f ENSGT00390000000483.b.e ENSGT00940000158750 ENSGT00390000012901.k ENSGT00940000159350.h ENSGT00940000157037.a.c.a.a Salmo ANCESTRAL SPECIES 39 ENSGT00940000158061.b.b ENSGT00390000002307.f.b.a.a ENSGT00940000162831 ENSGT00940000159065.b.c.b ENSGT00940000155473.c.b.b ENSGT00940000163886.B.b.b.c.a.b.b ENSGT00940000153336.a.b.b ENSGT00940000163961.a.b.a ENSGT00940000161090.B.c.a.b.e ENSGT01020000230338.a.b.b.a.b.b.b ENSGT00940000159381.d.b ENSGT01050000244866.B.c.a.a ENSGT00940000165533.c.a ENSGT01100000263541.a.a.a.b.b.b.a.b.a.a.a.b ENSGT00940000155308.d.`b ENSGT00940000155230.f.a #22 ENSGT00940000155458.j.b ENSGT00940000160046.a ENSGT00940000165151.b.e ENSGT00390000016807.f ENSGT01050000244850.A.b.a.a.j.o.a.b ENSGT00940000154610.e.b.b.a ENSGT00530000063851.a.b.a ENSGT00390000016221.xb.b ENSGT00940000164716.C.a ENSGT00390000014853.f ENSGT00390000000483.b.e ENSGT00940000158750 ENSGT00390000012901.k ENSGT00940000159350.h ENSGT00940000157037.a.c.a.a River trout MODERN SPECIES 7 HDAC7 (ENSSTUG00000044440) vdrb (ENSSTUG00000044485) ENSSTUG00000044529 ENSSTUG00000044547 ENSSTUG00000044553 eif4bb (ENSSTUG00000044567) ENSSTUG00000044611 ENSSTUG00000044613 ENSSTUG00000044638 ENSSTUG00000044677 VSTM2L (ENSSTUG00000044694) quo (ENSSTUG00000044756) ENSSTUG00000046184 ENSSTUG00000046186 DLGAP4 (ENSSTUG00000046191) ENSSTUG00000046210 #22 MYL9 (ENSSTUG00000046219) LPIN3 (ENSSTUG00000046242) ENSSTUG00000046583 tpra1 (ENSSTUG00000046616) ENSSTUG00000046830 ENSSTUG00000046834 PLXNA1 (ENSSTUG00000046884) ENSSTUG00000047436 ENSSTUG00000047444 ENSSTUG00000047451 ENSSTUG00000047472 CYTL1 (ENSSTUG00000047476) msx1a (ENSSTUG00000047477) stx18 (ENSSTUG00000047481) NSG1 (ENSSTUG00000047511) Atlantic salmon MODERN SPECIES 14 ENSSSAG00000067756 ENSSSAG00000111268 vdrb (ENSSSAG00000067669) ENSSSAG00000108297 ENSSSAG00000120547 eif4bb (ENSSSAG00000067620) krt18b (ENSSSAG00000067593) ENSSSAG00000122146 krt4 (ENSSSAG00000067586) ENSSSAG00000067581 ENSSSAG00000108449 tgm2 (ENSSSAG00000067504) quo (ENSSSAG00000067485) ENSSSAG00000067481 ENSSSAG00000067467 ENSSSAG00000113398 #22 MLRN (ENSSSAG00000067458) ENSSSAG00000066945 ENSSSAG00000066934 ENSSSAG00000100201 ENSSSAG00000057359 ENSSSAG00000121841 ENSSSAG00000093192 ENSSSAG00000118279 ENSSSAG00000115082 ENSSSAG00000055807 ENSSSAG00000055781 ENSSSAG00000083337 msx1a (ENSSSAG00000055769) stx18 (ENSSSAG00000116919) zbtb49 (ENSSSAG00000055050) Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000158061.b.b ENSGT00390000002307.f.b.a.a ENSGT00940000159065.b.c.b ENSGT00940000155473.c.b.b ENSGT00940000163886.B.b.b.c.a.b.a.a ENSGT00940000153336.a.b.b ENSGT00940000163961.a.b.a ENSGT00940000161090.B.c.a.b.e ENSGT00940000161090.B.c.b.a.a.b ENSGT01020000230338.a.b.b.a.b.b.b ENSGT00940000159381.d.b ENSGT01050000244866.B.c.a.a ENSGT00940000165533.c.a ENSGT01100000263541.a.a.a.b.b.b.a.b.a.a.a.b ENSGT00940000155308.d.`b.a ENSGT00940000155230.f.a #22 ENSGT00940000155458.j.b ENSGT00940000160046.a ENSGT00940000165151.b.e.b ENSGT00940000165151.b.e.a ENSGT00390000016807.f ENSGT01050000244850.A.b.a.a.j.o.a.b ENSGT00940000154610.e.b.b.a ENSGT00530000063851.a.b.a ENSGT00390000016221.xb.b ENSGT00940000164716.C.a ENSGT00390000014853.f ENSGT00390000000483.b.e ENSGT00940000158750 ENSGT00390000012901.k ENSGT00940000159350.h Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000158061.b.b ENSGT00390000002307.f.b.a.a ENSGT00940000159065.b.c.b ENSGT00940000155473.c.b.b ENSGT00940000163886.B.b.b.c.a.b.a.a ENSGT00940000153336.a.b.b ENSGT00940000163961.a.b.a ENSGT00940000161090.B.c.a.b.e ENSGT00940000161090.B.c.b.a.a.b ENSGT01020000230338.a.b.b.a.b.b.b ENSGT00940000159381.d.b ENSGT01050000244866.B.c.a.a ENSGT00940000165533.c.a ENSGT01100000263541.a.a.a.b.b.b.a.b.a.a.a.b ENSGT00940000155308.d.`b.a ENSGT00940000155230.f.a #22 ENSGT00940000155458.j.b ENSGT00940000160046.a ENSGT00940000165151.b.e.b ENSGT00940000165151.b.e.a ENSGT00390000016807.f ENSGT01050000244850.A.b.a.a.j.o.a.b ENSGT00940000154610.e.b.b.a ENSGT00530000063851.a.b.a ENSGT00390000016221.xb.b ENSGT00940000164716.C.a ENSGT00390000014853.f ENSGT00390000000483.b.e ENSGT00940000158750 ENSGT00390000012901.k ENSGT00940000159350.h Chinook salmon MODERN SPECIES 31 slc48a1b (ENSOTSG00005018770) ENSOTSG00005018766 vdrb (ENSOTSG00005018763) ENSOTSG00005018758 eif4bb (ENSOTSG00005018751) krt18b (ENSOTSG00005018746) ENSOTSG00005018743 krt4 (ENSOTSG00005018737) ENSOTSG00005018736 VSTM2L (ENSOTSG00005018735) tgm2b (ENSOTSG00005015504) ENSOTSG00005015503 quo (ENSOTSG00005015501) ENSOTSG00005015500 DLGAP4 (ENSOTSG00005015499) ENSOTSG00005015498 #22 MYL9 (ENSOTSG00005015497) ENSOTSG00005015496 ENSOTSG00005015494 tpra1 (ENSOTSG00005015487) PLXNA1 (ENSOTSG00005009498) ENSOTSG00005009467 ENSOTSG00005009466 ENSOTSG00005009465 msx1a (ENSOTSG00005009463) stx18 (ENSOTSG00005009457) NSG1 (ENSOTSG00005009455) zbtb49 (ENSOTSG00005009454) TMEM128 (ENSOTSG00005009453) OTOP1 (ENSOTSG00005009452) DRD5 (ENSOTSG00005009451) Coho salmon MODERN SPECIES 25 ITGA5 (ENSOKIG00005034829) slc48a1b (ENSOKIG00005034768) ENSOKIG00005034580 ENSOKIG00005034496 vdrb (ENSOKIG00005034417) ENSOKIG00005034401 eif4bb (ENSOKIG00005034388) ENSOKIG00005034381 ENSOKIG00005034232 ENSOKIG00005034203 VSTM2L (ENSOKIG00005034192) tgm2b (ENSOKIG00005032355) quo (ENSOKIG00005032132) ENSOKIG00005032121 DLGAP4 (ENSOKIG00005032110) ENSOKIG00005032104 #22 myl9a (ENSOKIG00005032093) ENSOKIG00005032030 tpra1 (ENSOKIG00005031969) PLXNA1 (ENSOKIG00005030554) ENSOKIG00005030312 ENSOKIG00005030251 ENSOKIG00005030203 CYTL1 (ENSOKIG00005030181) msx1a (ENSOKIG00005030165) stx18 (ENSOKIG00005030136) NSG1 (ENSOKIG00005030116) zbtb49 (ENSOKIG00005030104) ENSOKIG00005030075 TMEM128 (ENSOKIG00005030059) OTOP1 (ENSOKIG00005030047) Rainbow trout MODERN SPECIES 28 ENSOMYG00000018717 ENSOMYG00000077505 ENSOMYG00000018685 eif4bb (ENSOMYG00000018669) ENSOMYG00000018663 ENSOMYG00000018206 ENSOMYG00000018171 ENSOMYG00000018164 ENSOMYG00000015988 ENSOMYG00000066270 ENSOMYG00000049015 ENSOMYG00000066685 ENSOMYG00000015846 ENSOMYG00000049455 ENSOMYG00000015828 ENSOMYG00000070467 #22 ENSOMYG00000015818 ENSOMYG00000015795 ENSOMYG00000015774 tpra1 (ENSOMYG00000015765) ENSOMYG00000063980 ENSOMYG00000068270 ENSOMYG00000014961 ENSOMYG00000014779 ENSOMYG00000014761 CYTL1 (ENSOMYG00000014744) msx1a (ENSOMYG00000014727) stx18 (ENSOMYG00000014710) NSG1 (ENSOMYG00000014696) zbtb49 (ENSOMYG00000014686) TMEM128 (ENSOMYG00000014679) Huchen MODERN SPECIES 3630 ENSHHUG00000048411 #22 myl9a (ENSHHUG00000048393) ENSHHUG00000048390 ENSHHUG00000048388 tpra1 (ENSHHUG00000048385) Salmoninae ANCESTRAL SPECIES 20 ENSGT00940000159178.m.b ENSGT00950000182882.A.a.i.a.b ENSGT00940000158061.b.a ENSGT00390000002307.f.b.b ENSGT00940000163428.a.a.a ENSGT00940000159065.b.c.a ENSGT00940000155473.c.b.a ENSGT00940000163886.B.b.b.c.a.a ENSGT00940000153336.a.b.a ENSGT00940000163961.a.b.b ENSGT00940000161090.B.c.a.b.f ENSGT00940000159381.d.a ENSGT01050000244866.B.c.a.b ENSGT00940000165533.c.b ENSGT00940000155308.d.ab ENSGT00940000155230.f.b #22 ENSGT00940000155458.j.a ENSGT00940000160046.b ENSGT00940000165151.b.f ENSGT00390000016807.e ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.j.o.a.a ENSGT00940000154610.e.b.b.b ENSGT00530000063851.a.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00390000016221.xb.a ENSGT00940000164716.C.b ENSGT00390000014853.e ENSGT00390000000483.b.f ENSGT00390000003477 Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000159178.m.b ENSGT00950000182882.A.a.i.a.b ENSGT00940000158061.b.a ENSGT00390000002307.f.b.b ENSGT00940000163428.a.a.a ENSGT00940000159065.b.c.a ENSGT00940000155473.c.b.a ENSGT00940000163886.B.b.b.c.a.a ENSGT00940000153336.a.b.a ENSGT00940000163961.a.b.b ENSGT00940000161090.B.c.a.b.f ENSGT00940000159381.d.a ENSGT01050000244866.B.c.a.b ENSGT00940000165533.c.b ENSGT00940000155308.d.ab ENSGT00940000155230.f.b #22 ENSGT00940000155458.j.a ENSGT00940000160046.b ENSGT00940000165151.b.f ENSGT00390000016807.e ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.j.o.a.a ENSGT00940000154610.e.b.b.b ENSGT00530000063851.a.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00390000016221.xb.a ENSGT00940000164716.C.b ENSGT00390000014853.e ENSGT00390000000483.b.f ENSGT00390000003477 Salmo ANCESTRAL SPECIES 62 ENSGT00940000158061.b.a ENSGT00390000002307.f.b.b ENSGT00940000163428.a.a.a ENSGT00940000159065.b.c.a ENSGT01040000240444.A.b.b.f ENSGT00940000155473.c.b.a ENSGT00940000163886.B.b.b.c.a.a ENSGT00940000153336.a.b.a ENSGT00940000163961.a.b.b ENSGT00940000161090.B.c.a.b.f ENSGT00940000161090.B.c.b.a.a.b ENSGT00940000159381.d.a ENSGT01050000244866.B.c.a.b ENSGT00940000165533.c.b ENSGT00940000155308.d.ab ENSGT00940000155230.f.b #22 ENSGT00940000155458.j.a ENSGT00940000160046.b ENSGT00940000165151.b.f ENSGT00390000016807.e ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.j.o.a.a ENSGT00940000154610.e.b.b.b ENSGT00530000063851.a.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00390000016221.xb.a ENSGT00940000164716.C.b ENSGT00390000014853.e ENSGT00390000000483.b.f ENSGT00390000003477 River trout MODERN SPECIES 5 ITGA5 (ENSSTUG00000047624) slc48a1b (ENSSTUG00000047610) ENSSTUG00000047609 HDAC7 (ENSSTUG00000047521) gpr55a (ENSSTUG00000047515) vdrb (ENSSTUG00000047493) ENSSTUG00000047460 eif4bb (ENSSTUG00000047450) krt18b (ENSSTUG00000047437) ENSSTUG00000047419 ENSSTUG00000047413 VSTM2L (ENSSTUG00000047408) quo (ENSSTUG00000046779) DLGAP4 (ENSSTUG00000046724) ENSSTUG00000046712 ENSSTUG00000046709 #22 ENSSTUG00000046677 ENSSTUG00000046665 tpra1 (ENSSTUG00000046630) chchd6b (ENSSTUG00000046596) PLXNA1 (ENSSTUG00000045214) ENSSTUG00000045145 ENSSTUG00000045102 ENSSTUG00000045088 EVC (ENSSTUG00000045050) EVC2 (ENSSTUG00000044933) CYTL1 (ENSSTUG00000044912) msx1a (ENSSTUG00000044903) stx18 (ENSSTUG00000044863) NSG1 (ENSSTUG00000044846) lyar (ENSSTUG00000044842) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000102396 ENSSSAG00000086242 vdrb (ENSSSAG00000007676) ENSSSAG00000094804 ENSSSAG00000007912 ENSSSAG00000007921 eif4bb (ENSSSAG00000007939) krt18b (ENSSSAG00000007948) ENSSSAG00000107528 krt4 (ENSSSAG00000007973) ENSSSAG00000099324 ENSSSAG00000117253 tgm2b (ENSSSAG00000104281) quo (ENSSSAG00000008094) ENSSSAG00000009354 ENSSSAG00000119917 #22 ENSSSAG00000115907 ENSSSAG00000009421 ENSSSAG00000009598 tpra1 (ENSSSAG00000009608) CHCH3 (ENSSSAG00000009628) ENSSSAG00000009796 ENSSSAG00000041626 ENSSSAG00000041683 EVC2 (ENSSSAG00000041796) EVC (ENSSSAG00000041722) msx1a (ENSSSAG00000041900) ENSSSAG00000041884 stx18 (ENSSSAG00000041913) NSG1 (ENSSSAG00000041933) LYAR (ENSSSAG00000041943) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000159178.m.b ENSGT00950000182882.A.a.i.a.b ENSGT00940000158061.b.a ENSGT00390000002307.f.b.b ENSGT00940000163428.a.a.a ENSGT00390000002307.f.b.a.b ENSGT00940000159065.b.c.a ENSGT00940000155473.c.b.a ENSGT00940000163886.B.b.b.c.a.a ENSGT00940000153336.a.b.a ENSGT00940000163961.a.b.b ENSGT00940000161090.B.c.a.b.f ENSGT00940000159381.d.a ENSGT00940000165533.c.b ENSGT00940000155308.d.ab ENSGT00940000155230.f.b #22 ENSGT00940000155458.j.a ENSGT00940000160046.b ENSGT00940000165151.b.f ENSGT00390000016807.e ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.j.o.a.a ENSGT00940000154610.e.b.b.b ENSGT00530000063851.a.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00390000016221.xb.a ENSGT00940000164716.C.b ENSGT00390000014853.e ENSGT00390000000483.b.f ENSGT00390000003477 Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000159178.m.b ENSGT00950000182882.A.a.i.a.b ENSGT00940000158061.b.a ENSGT00390000002307.f.b.b ENSGT00940000163428.a.a.a ENSGT00390000002307.f.b.a.b ENSGT00940000159065.b.c.a ENSGT00940000155473.c.b.a ENSGT00940000163886.B.b.b.c.a.a ENSGT00940000153336.a.b.a ENSGT00940000163961.a.b.b ENSGT00940000161090.B.c.a.b.f ENSGT00940000159381.d.a ENSGT00940000165533.c.b ENSGT00940000155308.d.ab ENSGT00940000155230.f.b #22 ENSGT00940000155458.j.a ENSGT00940000160046.b ENSGT00940000165151.b.f ENSGT00390000016807.e ENSGT00390000000903.b.a ENSGT01050000244850.A.b.a.a.j.o.a.a ENSGT00920000149095.e ENSGT00940000154610.e.b.b.b ENSGT00530000063851.a.b.b ENSGT00940000154127.B ENSGT00940000154127.A ENSGT00390000016221.xb.a ENSGT00940000164716.C.b ENSGT00390000014853.e ENSGT00390000000483.b.f Coho salmon MODERN SPECIES CHST13 (ENSOKIG00005000527) txnrd3 (ENSOKIG00005000317) bin2b (ENSOKIG00005000106) ITGA5 (ENSOKIG00005018969) slc48a1b (ENSOKIG00005018908) ENSOKIG00005018903 ENSOKIG00005018872 vdrb (ENSOKIG00005018812) ENSOKIG00005018770 eif4bb (ENSOKIG00005018714) krt18b (ENSOKIG00005018700) ENSOKIG00005018588 ENSOKIG00005018565 quo (ENSOKIG00005016865) DLGAP4 (ENSOKIG00005016760) ENSOKIG00005016755 #22 ENSOKIG00005016746 LPIN3 (ENSOKIG00005016699) ENSOKIG00005016679 tpra1 (ENSOKIG00005016421) chchd6b (ENSOKIG00005016397) PLXNA1 (ENSOKIG00005016340) ENSOKIG00005016330 ENSOKIG00005016325 ENSOKIG00005016192 ENSOKIG00005016140 EVC (ENSOKIG00005016123) EVC2 (ENSOKIG00005016071) CYTL1 (ENSOKIG00005016049) msx1a (ENSOKIG00005016039) ENSOKIG00005016033 Chinook salmon MODERN SPECIES 11 ENSOTSG00005000171 txnrd3 (ENSOTSG00005000236) bin2b (ENSOTSG00005000660) ITGA5 (ENSOTSG00005000680) slc48a1b (ENSOTSG00005003579) ENSOTSG00005003582 vdrb (ENSOTSG00005003585) ENSOTSG00005003619 ENSOTSG00005003622 eif4bb (ENSOTSG00005003634) krt18b (ENSOTSG00005003635) ENSOTSG00005003647 VSTM2L (ENSOTSG00005003859) quo (ENSOTSG00005003899) DLGAP4 (ENSOTSG00005006614) ENSOTSG00005006615 #22 ENSOTSG00005006616 ENSOTSG00005006623 tpra1 (ENSOTSG00005006637) chchd6b (ENSOTSG00005006767) PLXNA1 (ENSOTSG00005006769) ENSOTSG00005006805 ENSOTSG00005006806 ENSOTSG00005006887 EVC (ENSOTSG00005006888) EVC2 (ENSOTSG00005006889) CYTL1 (ENSOTSG00005006891) msx1a (ENSOTSG00005006892) stx18 (ENSOTSG00005006893) NSG1 (ENSOTSG00005006894) lyar (ENSOTSG00005006895) Rainbow trout MODERN SPECIES 8 ENSOMYG00000045036 ENSOMYG00000063988 ENSOMYG00000067886 vdrb (ENSOMYG00000045059) ENSOMYG00000045113 eif4bb (ENSOMYG00000045129) ENSOMYG00000045139 ENSOMYG00000072047 e3 (ENSOMYG00000045164) ENSOMYG00000076830 ENSOMYG00000045239 ENSOMYG00000052293 ENSOMYG00000064271 ENSOMYG00000045294 ENSOMYG00000045748 ENSOMYG00000045758 #22 ENSOMYG00000045762 ENSOMYG00000045781 ENSOMYG00000045808 tpra1 (ENSOMYG00000045830) chchd6b (ENSOMYG00000045868) ENSOMYG00000052808 ENSOMYG00000045997 ENSOMYG00000046446 ENSOMYG00000046454 ENSOMYG00000046478 EVC (ENSOMYG00000046465) EVC2 (ENSOMYG00000046495) CYTL1 (ENSOMYG00000046507) msx1a (ENSOMYG00000046511) ENSOMYG00000066574 Huchen MODERN SPECIES 572 ENSHHUG00000000707 ENSHHUG00000000711 #22 ENSHHUG00000000717 ENSHHUG00000000853 ENSHHUG00000000860 tpra1 (ENSHHUG00000000862) chchd6b (ENSHHUG00000000889) ENSHHUG00000000931 Acanthomorphata ANCESTRAL SPECIES 17 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000165657 ENSGT00950000185351 ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b Cod DUPLICATION Cod MODERN SPECIES 15 ENSGMOG00000023384 ENSGMOG00000035422 ENSGMOG00000011210 chchd7 (ENSGMOG00000027553) plag1 (ENSGMOG00000018396) ENSGMOG00000019837 ENSGMOG00000017907 zgc:56231 (ENSGMOG00000017911) rgs9bp (ENSGMOG00000017958) zgc:165532 (ENSGMOG00000017965) dph2 (ENSGMOG00000017982) ncf2 (ENSGMOG00000017994) garem (ENSGMOG00000018028) ENSGMOG00000018038 ENSGMOG00000025493 ENSGMOG00000023904 #22 ENSGMOG00000026235 #23 htr5ab (ENSGMOG00000017509) insig1 (ENSGMOG00000004976) en2a (ENSGMOG00000004983) ENSGMOG00000028920 ENSGMOG00000030389 shha (ENSGMOG00000027117) rnf32 (ENSGMOG00000005073) lmbr1 (ENSGMOG00000005099) nom1 (ENSGMOG00000005129) mnx1 (ENSGMOG00000005155) ube3c (ENSGMOG00000005168) dnajb6b (ENSGMOG00000031737) CACNB2 (ENSGMOG00000005230) SLC39A12 (ENSGMOG00000005264) Cod MODERN SPECIES 4 ENSGMOG00000001938 LSM3 (ENSGMOG00000011024) ENSGMOG00000033940 ENSGMOG00000011031 ENSGMOG00000012246 tomm34 (ENSGMOG00000011260) ENSGMOG00000011248 ccndbp1 (ENSGMOG00000011233) ENSGMOG00000018677 pmepa1 (ENSGMOG00000018691) ENSGMOG00000018700 ENSGMOG00000018712 ENSGMOG00000034122 ENSGMOG00000010159 ENSGMOG00000026537 ENSGMOG00000017046 #22 ENSGMOG00000017056 ENSGMOG00000017066 ENSGMOG00000017117 tpra1 (ENSGMOG00000017122) chchd6b (ENSGMOG00000032292) ENSGMOG00000017171 ENSGMOG00000017248 ENSGMOG00000031298 ENSGMOG00000017311 EVC2 (ENSGMOG00000017360) CYTL1 (ENSGMOG00000025888) msx1a (ENSGMOG00000017431) stx18 (ENSGMOG00000017447) NSG1 (ENSGMOG00000017468) ENSGMOG00000017475 Euacanthomorphacea ANCESTRAL SPECIES 16 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000165657 ENSGT00950000185351 ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b Pinecone sodierfish DUPLICATION Pinecone sodierfish MODERN SPECIES 12 zic4 (ENSMMDG00005014816) ENSMMDG00005014813 plod2 (ENSMMDG00005014786) dipk2ab (ENSMMDG00005014766) SLC9A9 (ENSMMDG00005014761) CHST2 (ENSMMDG00005014757) trpc1 (ENSMMDG00005014745) pcolce2b (ENSMMDG00005014736) u2surp (ENSMMDG00005013959) ackr4b (ENSMMDG00005013941) acad11 (ENSMMDG00005012190) uba5 (ENSMMDG00005012121) ENSMMDG00005012116 ENSMMDG00005012108 ENSMMDG00005012106 tgif1 (ENSMMDG00005012105) #22 DLGAP1 (ENSMMDG00005010891) #23 htr5ab (ENSMMDG00005010883) insig1 (ENSMMDG00005010880) en2a (ENSMMDG00005010878) RBM33 (ENSMMDG00005010875) shha (ENSMMDG00005010872) rnf32 (ENSMMDG00005010870) lmbr1 (ENSMMDG00005010829) nom1 (ENSMMDG00005010815) mnx1 (ENSMMDG00005010812) ube3c (ENSMMDG00005010784) dnajb6b (ENSMMDG00005010778) ptprn2 (ENSMMDG00005010768) ncapg2 (ENSMMDG00005010761) ESYT2 (ENSMMDG00005007951) Pinecone sodierfish MODERN SPECIES 19 ENSMMDG00005006362 slc48a1b (ENSMMDG00005006364) ENSMMDG00005006367 HDAC7 (ENSMMDG00005006368) vdrb (ENSMMDG00005006380) ENSMMDG00005006422 ENSMMDG00005006429 eif4bb (ENSMMDG00005006436) krt18b (ENSMMDG00005006440) ENSMMDG00005006451 krt4 (ENSMMDG00005006970) VSTM2L (ENSMMDG00005006971) quo (ENSMMDG00005006993) DLGAP4 (ENSMMDG00005007954) ENSMMDG00005007956 ENSMMDG00005007958 #22 myl9a (ENSMMDG00005007961) LPIN3 (ENSMMDG00005007965) ENSMMDG00005008120 tpra1 (ENSMMDG00005008127) chchd6b (ENSMMDG00005008147) PLXNA1 (ENSMMDG00005008161) ENSMMDG00005008225 ENSMMDG00005008313 EVC (ENSMMDG00005008317) EVC2 (ENSMMDG00005008322) CYTL1 (ENSMMDG00005008324) msx1a (ENSMMDG00005008326) stx18 (ENSMMDG00005008327) NSG1 (ENSMMDG00005008331) aggf1 (ENSMMDG00005008332) Percomorphaceae ANCESTRAL SPECIES 24 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000165657 ENSGT00950000185351 ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b Percomorphaceae_B ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00940000154095.b.a.b Ovalentaria ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Atherinomorphae ANCESTRAL SPECIES 19 ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000164635 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Cyprinodontiformes ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Cyprinodontoidei ANCESTRAL SPECIES 27 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d NAME_4 ANCESTRAL SPECIES 38 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d ENSGT00390000013743 Sheepshead minnow MODERN SPECIES 602 CHST2 (ENSCVAG00000003027) trpc1 (ENSCVAG00000003014) pcolce2b (ENSCVAG00000002989) u2surp (ENSCVAG00000002961) acad11 (ENSCVAG00000002900) ackr4b (ENSCVAG00000002846) uba5 (ENSCVAG00000002839) nphp3 (ENSCVAG00000002811) ENSCVAG00000002781 KIAA1217 (ENSCVAG00000002769) OTUD1 (ENSCVAG00000002712) tgif1 (ENSCVAG00000002708) #22 DLGAP1 (ENSCVAG00000002696) #23 htr5ab (ENSCVAG00000002681) insig1 (ENSCVAG00000002676) en2a (ENSCVAG00000002672) Mummichog DUPLICATION Mummichog MODERN SPECIES 528 dipk2ab (ENSFHEG00000017172) SLC9A9 (ENSFHEG00000017158) CHST2 (ENSFHEG00000017120) trpc1 (ENSFHEG00000017107) pcolce2b (ENSFHEG00000017009) u2surp (ENSFHEG00000016966) acad11 (ENSFHEG00000016938) ackr4b (ENSFHEG00000016909) uba5 (ENSFHEG00000016904) nphp3 (ENSFHEG00000016846) ENSFHEG00000016490 ENSFHEG00000016470 ENSFHEG00000016458 ENSFHEG00000016445 OTUD1 (ENSFHEG00000016438) tgif1 (ENSFHEG00000016432) #22 DLGAP1 (ENSFHEG00000016417) #23 htr5ab (ENSFHEG00000016185) insig1 (ENSFHEG00000016170) en2a (ENSFHEG00000016151) ENSFHEG00000016130 shha (ENSFHEG00000016095) lmbr1 (ENSFHEG00000016075) nom1 (ENSFHEG00000015974) mnx1 (ENSFHEG00000015966) ube3c (ENSFHEG00000000401) dnajb6b (ENSFHEG00000015896) ptprn2 (ENSFHEG00000015881) ncapg2 (ENSFHEG00000015827) ESYT2 (ENSFHEG00000015809) DYNC2I1 (ENSFHEG00000015536) Mummichog MODERN SPECIES 2276 slc48a1b (ENSFHEG00000006694) ENSFHEG00000006738 ENSFHEG00000006814 vdrb (ENSFHEG00000006854) ENSFHEG00000006906 eif4bb (ENSFHEG00000006923) krt18b (ENSFHEG00000006944) ENSFHEG00000006952 krt4 (ENSFHEG00000007170) krt4 (ENSFHEG00000007468) ENSFHEG00000007480 tgm2b (ENSFHEG00000007488) quo (ENSFHEG00000007508) DLGAP4 (ENSFHEG00000007541) ENSFHEG00000007553 ENSFHEG00000007559 #22 MYL9 (ENSFHEG00000007575) LPIN3 (ENSFHEG00000007597) ENSFHEG00000000660 tpra1 (ENSFHEG00000007648) chchd6b (ENSFHEG00000007667) PLXNA1 (ENSFHEG00000007770) Poeciliinae ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Platyfish DUPLICATION Platyfish MODERN SPECIES 13 zic4 (ENSXMAG00000009162) ENSXMAG00000009159 plod2 (ENSXMAG00000009123) dipk2ab (ENSXMAG00000029512) CHST2 (ENSXMAG00000020056) trpc1 (ENSXMAG00000002645) pcolce2b (ENSXMAG00000002628) u2surp (ENSXMAG00000002608) ackr4b (ENSXMAG00000020055) acad11 (ENSXMAG00000002591) uba5 (ENSXMAG00000002572) nphp3 (ENSXMAG00000002552) ENSXMAG00000020054 ENSXMAG00000002535 ENSXMAG00000020053 tgif1 (ENSXMAG00000025259) #22 DLGAP1 (ENSXMAG00000002511) #23 htr5ab (ENSXMAG00000022057) insig1 (ENSXMAG00000002501) en2a (ENSXMAG00000002496) ENSXMAG00000002488 shha (ENSXMAG00000024356) ENSXMAG00000028484 lmbr1 (ENSXMAG00000002460) nom1 (ENSXMAG00000002451) mnx1 (ENSXMAG00000026824) ube3c (ENSXMAG00000002424) dnajb6b (ENSXMAG00000022848) ptprn2 (ENSXMAG00000002417) ncapg2 (ENSXMAG00000002381) ESYT2 (ENSXMAG00000002363) Platyfish MODERN SPECIES 12 PHF13 (ENSXMAG00000018723) slc48a1b (ENSXMAG00000025467) ENSXMAG00000019956 ENSXMAG00000018719 vdrb (ENSXMAG00000018707) ENSXMAG00000018693 eif4bb (ENSXMAG00000018673) ENSXMAG00000026949 krt18b (ENSXMAG00000018664) ENSXMAG00000018657 krt4 (ENSXMAG00000018620) ENSXMAG00000025854 tgm2b (ENSXMAG00000018589) quo (ENSXMAG00000018570) DLGAP4 (ENSXMAG00000018563) ENSXMAG00000029733 #22 myl9a (ENSXMAG00000018556) LPIN3 (ENSXMAG00000018523) ENSXMAG00000019955 tpra1 (ENSXMAG00000029469) chchd6b (ENSXMAG00000018508) PLXNA1 (ENSXMAG00000018477) ENSXMAG00000018466 ENSXMAG00000018462 EVC (ENSXMAG00000018457) EVC2 (ENSXMAG00000018445) CYTL1 (ENSXMAG00000022993) msx1a (ENSXMAG00000022450) stx18 (ENSXMAG00000021261) NSG1 (ENSXMAG00000027865) ENSXMAG00000022942 Poecilia ANCESTRAL SPECIES 17 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d ENSGT00390000013743 NAME_6 ANCESTRAL SPECIES 22 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d ENSGT00390000013743 Amazon molly MODERN SPECIES 322 plod2 (ENSPFOG00000014071) dipk2ab (ENSPFOG00000014242) SLC9A9 (ENSPFOG00000014256) CHST2 (ENSPFOG00000020906) trpc1 (ENSPFOG00000014387) CHST2 (ENSPFOG00000020907) pcolce2b (ENSPFOG00000014427) u2surp (ENSPFOG00000014489) acad11 (ENSPFOG00000014717) ackr4b (ENSPFOG00000020908) uba5 (ENSPFOG00000014892) nphp3 (ENSPFOG00000014991) ENSPFOG00000015120 ENSPFOG00000015234 ENSPFOG00000020909 tgif1 (ENSPFOG00000015236) #22 DLGAP1 (ENSPFOG00000015242) #23 ENSPFOG00000015303 htr5ab (ENSPFOG00000015321) insig1 (ENSPFOG00000015325) en2a (ENSPFOG00000015347) ENSPFOG00000015364 shha (ENSPFOG00000015445) lmbr1 (ENSPFOG00000015538) nom1 (ENSPFOG00000015771) mnx1 (ENSPFOG00000015811) ube3c (ENSPFOG00000015824) dnajb6b (ENSPFOG00000015944) ptprn2 (ENSPFOG00000015970) ncapg2 (ENSPFOG00000016023) ESYT2 (ENSPFOG00000016172) Sailfin molly MODERN SPECIES 1134 ENSPLAG00000021834 tgif1 (ENSPLAG00000021810) #22 DLGAP1 (ENSPLAG00000021783) #23 htr5ab (ENSPLAG00000021745) Guppy DUPLICATION Guppy MODERN SPECIES 451 dipk2ab (ENSPREG00000009547) SLC9A9 (ENSPREG00000009525) CHST2 (ENSPREG00000009509) trpc1 (ENSPREG00000009469) pcolce2b (ENSPREG00000009420) u2surp (ENSPREG00000009325) ackr4b (ENSPREG00000009302) acad11 (ENSPREG00000009273) uba5 (ENSPREG00000009230) nphp3 (ENSPREG00000009187) ENSPREG00000009170 ENSPREG00000009159 ENSPREG00000009151 ENSPREG00000009145 ENSPREG00000009141 tgif1 (ENSPREG00000009131) #22 DLGAP1 (ENSPREG00000009076) #23 htr5ab (ENSPREG00000009048) insig1 (ENSPREG00000009030) ENSPREG00000008993 shha (ENSPREG00000008962) lmbr1 (ENSPREG00000008922) nom1 (ENSPREG00000008850) mnx1 (ENSPREG00000008828) ube3c (ENSPREG00000008777) dnajb6b (ENSPREG00000008759) ENSPREG00000008702 ncapg2 (ENSPREG00000008651) ESYT2 (ENSPREG00000008606) DYNC2I1 (ENSPREG00000008539) ENSPREG00000008511 Guppy MODERN SPECIES 457 PHF13 (ENSPREG00000001963) slc48a1b (ENSPREG00000001947) ENSPREG00000001907 ENSPREG00000001881 vdrb (ENSPREG00000001838) ENSPREG00000001790 eif4bb (ENSPREG00000001769) ENSPREG00000001749 krt18b (ENSPREG00000001728) ENSPREG00000001686 krt4 (ENSPREG00000001668) ENSPREG00000001653 tgm2b (ENSPREG00000001637) quo (ENSPREG00000001620) DLGAP4 (ENSPREG00000001583) ENSPREG00000001571 #22 LPIN3 (ENSPREG00000001467) ENSPREG00000001451 tpra1 (ENSPREG00000001423) chchd6b (ENSPREG00000001391) myl9a (ENSPREG00000001367) PLXNA1 (ENSPREG00000001211) ENSPREG00000001192 ENSPREG00000001174 EVC (ENSPREG00000001160) EVC2 (ENSPREG00000001055) CYTL1 (ENSPREG00000001044) msx1a (ENSPREG00000001030) stx18 (ENSPREG00000001019) NSG1 (ENSPREG00000001002) aggf1 (ENSPREG00000000844) Aplocheiloidei ANCESTRAL SPECIES 18 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Mangrove rivulus MODERN SPECIES 7 ENSKMAG00000011727 plod2 (ENSKMAG00000011768) dipk2ab (ENSKMAG00000011842) SLC9A9 (ENSKMAG00000011867) CHST2 (ENSKMAG00000011898) trpc1 (ENSKMAG00000011936) pcolce2b (ENSKMAG00000012021) u2surp (ENSKMAG00000012083) acad11 (ENSKMAG00000012184) ackr4b (ENSKMAG00000012223) uba5 (ENSKMAG00000012251) nphp3 (ENSKMAG00000012309) ENSKMAG00000012381 ENSKMAG00000012406 ENSKMAG00000012444 tgif1 (ENSKMAG00000012452) #22 DLGAP1 (ENSKMAG00000012484) #23 htr5ab (ENSKMAG00000012536) insig1 (ENSKMAG00000012561) en2a (ENSKMAG00000012593) ENSKMAG00000012618 shha (ENSKMAG00000012655) rnf32 (ENSKMAG00000012674) lmbr1 (ENSKMAG00000012707) ENSKMAG00000012773 mnx1 (ENSKMAG00000012808) ube3c (ENSKMAG00000012835) dnajb6b (ENSKMAG00000012914) ptprn2 (ENSKMAG00000012963) ncapg2 (ENSKMAG00000013036) ESYT2 (ENSKMAG00000013112) Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1619 PHF13 (ENSNFUG00015015986) ENSNFUG00015015965 slc48a1b (ENSNFUG00015015947) ENSNFUG00015015906 VDRB (ENSNFUG00015015702) ENSNFUG00015015474 EIF4B (ENSNFUG00015015425) KRT18 (ENSNFUG00015015409) ENSNFUG00015015239 ENSNFUG00015015195 VSTM2L (ENSNFUG00015015191) tgm2b (ENSNFUG00015013878) quo (ENSNFUG00015013746) ENSNFUG00015013737 DLGAP4 (ENSNFUG00015013723) ENSNFUG00015013712 #22 MYL9 (ENSNFUG00015013705) LPIN3 (ENSNFUG00015013566) ENSNFUG00015013535 Nfu_g_1_021384 (ENSNFUG00015013530) TPRA1 (ENSNFUG00015013486) ENSNFUG00015013441 ENSNFUG00015013434 PLXNA1 (ENSNFUG00015012420) RACGAP1 (ENSNFUG00015012305) MINAR1 (ENSNFUG00015012292) EVC (ENSNFUG00015012254) EVC2 (ENSNFUG00015012218) ENSNFUG00015012204 MSXE (ENSNFUG00015012196) stx18 (ENSNFUG00015012159) Turquoise killifish MODERN SPECIES 1617 TMEM187 (ENSNFUG00015011574) LRBA (ENSNFUG00015011636) ENSNFUG00015012191 MAB21L2 (ENSNFUG00015012195) RPS3A (ENSNFUG00015012205) SH3D19 (ENSNFUG00015012227) FHIP1A (ENSNFUG00015012248) ENSNFUG00015012271 mpp7a (ENSNFUG00015012381) ENSNFUG00015014107 UBA5 (ENSNFUG00015014351) ENSNFUG00015014563 ENSNFUG00015014958 ENSNFUG00015014991 OTUD1 (ENSNFUG00015015113) ENSNFUG00015015123 #22 DLGAP1 (ENSNFUG00015015142) #23 ENSNFUG00015015203 htr5ab (ENSNFUG00015015214) INSIG1 (ENSNFUG00015015237) ENG2A (ENSNFUG00015015267) RBM33 (ENSNFUG00015015295) SHHA (ENSNFUG00015015310) ENSNFUG00015015330 ENSNFUG00015015336 LMBR1 (ENSNFUG00015015366) nom1 (ENSNFUG00015015421) mnx1 (ENSNFUG00015015477) UBE3C (ENSNFUG00015015516) DNAJB6B (ENSNFUG00015015633) PTPRN2 (ENSNFUG00015015680) Oryzias ANCESTRAL SPECIES 18 ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000164635 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Oryzias_b ANCESTRAL SPECIES 16 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000164635 ENSGT00940000156177 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Javanese ricefish MODERN SPECIES 12 cpb1 (ENSOJAG00000010692) zic4 (ENSOJAG00000010623) zic1 (ENSOJAG00000010593) ENSOJAG00000010575 plod2 (ENSOJAG00000007017) ENSOJAG00000006650 dipk2ab (ENSOJAG00000006607) SLC9A9 (ENSOJAG00000006574) trpc1 (ENSOJAG00000006527) pcolce2b (ENSOJAG00000006444) ackr4b (ENSOJAG00000005729) uba5 (ENSOJAG00000004975) ENSOJAG00000004886 KIAA1217 (ENSOJAG00000004810) ENSOJAG00000004796 tgif1 (ENSOJAG00000004789) #22 DLGAP1 (ENSOJAG00000004655) #23 htr5ab (ENSOJAG00000004611) insig1 (ENSOJAG00000004574) en2a (ENSOJAG00000004559) ENSOJAG00000004526 shha (ENSOJAG00000004493) rnf32 (ENSOJAG00000004400) lmbr1 (ENSOJAG00000004048) ENSOJAG00000003783 mnx1 (ENSOJAG00000003744) ube3c (ENSOJAG00000003556) dnajb6b (ENSOJAG00000003521) ptprn2 (ENSOJAG00000019411) ncapg2 (ENSOJAG00000019398) ESYT2 (ENSOJAG00000017502) Indian medaka MODERN SPECIES 14 ENSOMEG00000005233 plod2 (ENSOMEG00000005197) dipk2ab (ENSOMEG00000005108) SLC9A9 (ENSOMEG00000005091) CHST2 (ENSOMEG00000005071) trpc1 (ENSOMEG00000005043) pcolce2b (ENSOMEG00000004994) u2surp (ENSOMEG00000004962) acad11 (ENSOMEG00000004902) ackr4b (ENSOMEG00000004884) ENSOMEG00000004867 uba5 (ENSOMEG00000004831) ENSOMEG00000004806 KIAA1217 (ENSOMEG00000004711) ENSOMEG00000004512 tgif1 (ENSOMEG00000004498) #22 DLGAP1 (ENSOMEG00000004473) #23 HTR5A (ENSOMEG00000004444) insig1 (ENSOMEG00000004418) en2a (ENSOMEG00000004380) ENSOMEG00000004361 shha (ENSOMEG00000004319) rnf32 (ENSOMEG00000004304) lmbr1 (ENSOMEG00000004274) nom1 (ENSOMEG00000004219) mnx1 (ENSOMEG00000004192) ube3c (ENSOMEG00000004179) ptprn2 (ENSOMEG00000004127) dnajb6b (ENSOMEG00000004046) ncapg2 (ENSOMEG00000004008) ESYT2 (ENSOMEG00000003937) Oryzias_a ANCESTRAL SPECIES 16 ENSGT00940000154200.B ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Japanese Medaka HdrR DUPLICATION Japanese Medaka HdrR MODERN SPECIES 12 zic4 (ENSORLG00000010055) ENSORLG00000024005 plod2 (ENSORLG00000010111) dipk2ab (ENSORLG00000027166) SLC9A9 (ENSORLG00000021970) CHST2 (ENSORLG00000010131) trpc1 (ENSORLG00000010171) pcolce2b (ENSORLG00000010197) u2surp (ENSORLG00000010235) acad11 (ENSORLG00000010243) ackr4b (ENSORLG00000010254) uba5 (ENSORLG00000010294) nphp3 (ENSORLG00000010314) KIAA1217 (ENSORLG00000010340) ENSORLG00000026921 tgif1 (ENSORLG00000027364) #22 DLGAP1 (ENSORLG00000010388) #23 htr5ab (ENSORLG00000025245) ENSORLG00000022479 insig1 (ENSORLG00000010423) en2a (ENSORLG00000010437) ENSORLG00000010456 shha (ENSORLG00000010463) rnf32 (ENSORLG00000010475) lmbr1 (ENSORLG00000010531) nom1 (ENSORLG00000010541) mnx1 (ENSORLG00000010549) ube3c (ENSORLG00000010581) dnajb6b (ENSORLG00000010614) ptprn2 (ENSORLG00000010629) ncapg2 (ENSORLG00000010666) Japanese Medaka HdrR MODERN SPECIES 19 ENSORLG00000016468 eif4bb (ENSORLG00000016502) krt18b (ENSORLG00000016545) ENSORLG00000016551 krt4 (ENSORLG00000016561) ENSORLG00000016568 ENSORLG00000025459 ENSORLG00000022850 tgm2b (ENSORLG00000016570) quo (ENSORLG00000016585) ENSORLG00000022705 ENSORLG00000024972 ENSORLG00000024114 ENSORLG00000022054 DLGAP4 (ENSORLG00000016608) ENSORLG00000022604 #22 myl9a (ENSORLG00000016619) LPIN3 (ENSORLG00000016643) ENSORLG00000029161 tpra1 (ENSORLG00000016658) chchd6b (ENSORLG00000016662) ENSORLG00000016679 ENSORLG00000016701 MINAR1 (ENSORLG00000016707) ENSORLG00000016712 EVC2 (ENSORLG00000016719) CYTL1 (ENSORLG00000016724) msx1a (ENSORLG00000016741) stx18 (ENSORLG00000016755) NSG1 (ENSORLG00000027438) ENSORLG00000016778 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 1041 zic4 (ENSOSIG00000006861) ENSOSIG00000006852 plod2 (ENSOSIG00000005985) dipk2ab (ENSOSIG00000005976) SLC9A9 (ENSOSIG00000005966) CHST2 (ENSOSIG00000005963) trpc1 (ENSOSIG00000005961) pcolce2b (ENSOSIG00000005888) u2surp (ENSOSIG00000005822) ackr4b (ENSOSIG00000005816) acad11 (ENSOSIG00000005803) uba5 (ENSOSIG00000005393) nphp3 (ENSOSIG00000005381) ENSOSIG00000005343 ENSOSIG00000005338 tgif1 (ENSOSIG00000005337) #22 DLGAP1 (ENSOSIG00000005242) #23 htr5ab (ENSOSIG00000005237) insig1 (ENSOSIG00000021095) Chinese medaka MODERN SPECIES 12 HIPK1 (ENSOSIG00000019361) ENSOSIG00000019421 DNAJC11 (ENSOSIG00000019447) PHF13 (ENSOSIG00000019511) slc48a1b (ENSOSIG00000019513) ENSOSIG00000019519 ENSOSIG00000019525 vdrb (ENSOSIG00000019545) ENSOSIG00000019633 eif4bb (ENSOSIG00000019771) krt18b (ENSOSIG00000019775) ENSOSIG00000019780 VSTM2L (ENSOSIG00000019782) ENSOSIG00000019830 DLGAP4 (ENSOSIG00000020526) ENSOSIG00000020527 #22 myl9a (ENSOSIG00000020529) LPIN3 (ENSOSIG00000020531) ENSOSIG00000020539 chchd6b (ENSOSIG00000020676) PLXNA1 (ENSOSIG00000020749) ENSOSIG00000020803 ENSOSIG00000020810 MINAR1 (ENSOSIG00000020815) ENSOSIG00000020817 CYTL1 (ENSOSIG00000001504) msx1a (ENSOSIG00000001525) stx18 (ENSOSIG00000001550) NSG1 (ENSOSIG00000001585) ENSOSIG00000001612 aggf1 (ENSOSIG00000001683) Ovalentaria_B ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Cichlidae ANCESTRAL SPECIES 18 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Midas cichlid MODERN SPECIES 363 ENSACIG00000018708 plod2 (ENSACIG00000018677) dipk2ab (ENSACIG00000018657) SLC9A9 (ENSACIG00000018630) CHST2 (ENSACIG00000018621) trpc1 (ENSACIG00000018603) pcolce2b (ENSACIG00000018585) u2surp (ENSACIG00000018537) ackr4b (ENSACIG00000018526) acad11 (ENSACIG00000018487) uba5 (ENSACIG00000018458) nphp3 (ENSACIG00000018414) ENSACIG00000018403 ENSACIG00000018317 ENSACIG00000018304 tgif1 (ENSACIG00000018293) #22 DLGAP1 (ENSACIG00000018274) #23 htr5ab (ENSACIG00000018260) insig1 (ENSACIG00000018246) en2a (ENSACIG00000018240) ENSACIG00000018229 shha (ENSACIG00000018215) shha (ENSACIG00000018203) rnf32 (ENSACIG00000018165) lmbr1 (ENSACIG00000018123) nom1 (ENSACIG00000018050) mnx1 (ENSACIG00000018035) ube3c (ENSACIG00000017978) dnajb6b (ENSACIG00000017960) Pseudocrenilabrinae ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Pseudocrenilabrinae_A ANCESTRAL SPECIES 19 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Haplochromini ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Burton s mouthbrooder DUPLICATION Burton s mouthbrooder MODERN SPECIES 270 plod2 (ENSHBUG00000015944) dipk2ab (ENSHBUG00000015830) ENSHBUG00000015812 ENSHBUG00000015791 CHST2 (ENSHBUG00000015763) trpc1 (ENSHBUG00000015757) pcolce2b (ENSHBUG00000015693) u2surp (ENSHBUG00000015530) acad11 (ENSHBUG00000015330) ackr4b (ENSHBUG00000015232) uba5 (ENSHBUG00000015220) nphp3 (ENSHBUG00000015187) ENSHBUG00000015091 ENSHBUG00000014867 ENSHBUG00000014852 tgif1 (ENSHBUG00000014836) #22 DLGAP1 (ENSHBUG00000014827) #23 htr5ab (ENSHBUG00000014776) insig1 (ENSHBUG00000014766) en2a (ENSHBUG00000014756) ENSHBUG00000014744 shha (ENSHBUG00000014721) rnf32 (ENSHBUG00000014705) lmbr1 (ENSHBUG00000014689) nom1 (ENSHBUG00000014616) mnx1 (ENSHBUG00000014600) ube3c (ENSHBUG00000014591) dnajb6b (ENSHBUG00000014555) ptprn2 (ENSHBUG00000014530) ncapg2 (ENSHBUG00000014496) ESYT2 (ENSHBUG00000014379) Burton s mouthbrooder MODERN SPECIES 294 ENSHBUG00000023796 slc48a1b (ENSHBUG00000023783) ENSHBUG00000000720 ENSHBUG00000023584 vdrb (ENSHBUG00000023547) ENSHBUG00000023510 ENSHBUG00000023477 eif4bb (ENSHBUG00000023345) krt18b (ENSHBUG00000023267) ENSHBUG00000023256 krt4 (ENSHBUG00000023199) VSTM2L (ENSHBUG00000023190) tgm2b (ENSHBUG00000023179) quo (ENSHBUG00000023168) DLGAP4 (ENSHBUG00000023097) ENSHBUG00000023088 #22 ENSHBUG00000023085 LPIN3 (ENSHBUG00000023048) ENSHBUG00000022818 tpra1 (ENSHBUG00000022802) chchd6b (ENSHBUG00000022758) PLXNA1 (ENSHBUG00000022740) ENSHBUG00000022636 ENSHBUG00000022622 ENSHBUG00000022615 EVC2 (ENSHBUG00000022544) CYTL1 (ENSHBUG00000022445) msx1a (ENSHBUG00000022432) stx18 (ENSHBUG00000022417) NSG1 (ENSHBUG00000022397) aggf1 (ENSHBUG00000022352) Haplochromini_A ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Haplochromini_B ANCESTRAL SPECIES 18 ENSGT00940000165699.B ENSGT01030000234558.A.a.b.i ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Zebra mbuna DUPLICATION Zebra mbuna MODERN SPECIES 1112 ENSMZEG00005019800 plod2 (ENSMZEG00005019823) dipk2ab (ENSMZEG00005021968) SLC9A9 (ENSMZEG00005021971) CHST2 (ENSMZEG00005021974) trpc1 (ENSMZEG00005021979) pcolce2b (ENSMZEG00005021986) u2surp (ENSMZEG00005021991) acad11 (ENSMZEG00005022006) ackr4b (ENSMZEG00005022042) uba5 (ENSMZEG00005022045) nphp3 (ENSMZEG00005022048) ENSMZEG00005022053 ENSMZEG00005022058 ENSMZEG00005022072 tgif1 (ENSMZEG00005022078) #22 DLGAP1 (ENSMZEG00005022080) #23 htr5ab (ENSMZEG00005022087) insig1 (ENSMZEG00005022090) en2a (ENSMZEG00005022094) ENSMZEG00005022100 shha (ENSMZEG00005022108) rnf32 (ENSMZEG00005000118) lmbr1 (ENSMZEG00005000286) nom1 (ENSMZEG00005000384) mnx1 (ENSMZEG00005000443) ube3c (ENSMZEG00005000448) dnajb6b (ENSMZEG00005000535) ptprn2 (ENSMZEG00005000547) ncapg2 (ENSMZEG00005000580) ESYT2 (ENSMZEG00005000604) Zebra mbuna MODERN SPECIES 1108 PHF13 (ENSMZEG00005026982) slc48a1b (ENSMZEG00005026981) ENSMZEG00005026980 ENSMZEG00005026979 vdrb (ENSMZEG00005026978) ENSMZEG00005026976 eif4bb (ENSMZEG00005026975) krt18b (ENSMZEG00005026974) ENSMZEG00005026973 krt4 (ENSMZEG00005026971) VSTM2L (ENSMZEG00005026968) tgm2b (ENSMZEG00005026966) quo (ENSMZEG00005026963) DLGAP4 (ENSMZEG00005026962) ENSMZEG00005026960 ENSMZEG00005026959 #22 ENSMZEG00005026958 LPIN3 (ENSMZEG00005026956) ENSMZEG00005026955 tpra1 (ENSMZEG00005026953) chchd6b (ENSMZEG00005026951) PLXNA1 (ENSMZEG00005026946) ENSMZEG00005026943 ENSMZEG00005026941 ENSMZEG00005026935 ENSMZEG00005026934 EVC2 (ENSMZEG00005026928) CYTL1 (ENSMZEG00005026927) msx1a (ENSMZEG00005026925) stx18 (ENSMZEG00005026924) NSG1 (ENSMZEG00005026922) Eastern happy DUPLICATION Eastern happy MODERN SPECIES 21 ENSACLG00000027409 plod2 (ENSACLG00000027422) dipk2ab (ENSACLG00000027458) SLC9A9 (ENSACLG00000027463) CHST2 (ENSACLG00000027469) trpc1 (ENSACLG00000027474) pcolce2b (ENSACLG00000027486) u2surp (ENSACLG00000027507) acad11 (ENSACLG00000027542) ackr4b (ENSACLG00000027556) uba5 (ENSACLG00000027559) nphp3 (ENSACLG00000027568) ENSACLG00000027585 ENSACLG00000027588 ENSACLG00000027605 tgif1 (ENSACLG00000027611) #22 DLGAP1 (ENSACLG00000027612) #23 ENSACLG00000027618 htr5ab (ENSACLG00000027619) insig1 (ENSACLG00000027622) en2a (ENSACLG00000027625) ENSACLG00000027629 shha (ENSACLG00000027636) rnf32 (ENSACLG00000027640) lmbr1 (ENSACLG00000027646) nom1 (ENSACLG00000000033) mnx1 (ENSACLG00000000070) ube3c (ENSACLG00000000077) dnajb6b (ENSACLG00000000170) ptprn2 (ENSACLG00000000190) ncapg2 (ENSACLG00000000242) Eastern happy MODERN SPECIES 17 ENSACLG00000008901 ENSACLG00000008904 slc48a1b (ENSACLG00000008909) ENSACLG00000008914 ENSACLG00000008922 vdrb (ENSACLG00000008953) ENSACLG00000008981 eif4bb (ENSACLG00000009013) krt18b (ENSACLG00000009071) ENSACLG00000009098 krt4 (ENSACLG00000009132) VSTM2L (ENSACLG00000009503) tgm2b (ENSACLG00000009544) quo (ENSACLG00000009570) DLGAP4 (ENSACLG00000009640) ENSACLG00000009669 #22 ENSACLG00000009916 LPIN3 (ENSACLG00000009928) ENSACLG00000009941 tpra1 (ENSACLG00000009944) chchd6b (ENSACLG00000009964) PLXNA1 (ENSACLG00000010182) ENSACLG00000010220 ENSACLG00000010362 ENSACLG00000010370 ENSACLG00000010376 EVC2 (ENSACLG00000010454) CYTL1 (ENSACLG00000010611) msx1a (ENSACLG00000010625) stx18 (ENSACLG00000010635) NSG1 (ENSACLG00000010658) P. nyererei DUPLICATION P. nyererei MODERN SPECIES 302 plod2 (ENSPNYG00000006024) dipk2ab (ENSPNYG00000006091) ENSPNYG00000006109 ENSPNYG00000006133 CHST2 (ENSPNYG00000006156) trpc1 (ENSPNYG00000006169) pcolce2b (ENSPNYG00000006206) u2surp (ENSPNYG00000006246) acad11 (ENSPNYG00000006373) ackr4b (ENSPNYG00000006435) uba5 (ENSPNYG00000006446) nphp3 (ENSPNYG00000006502) ENSPNYG00000006568 KIAA1217 (ENSPNYG00000006597) ENSPNYG00000006644 tgif1 (ENSPNYG00000006666) #22 DLGAP1 (ENSPNYG00000006690) #23 htr5ab (ENSPNYG00000006722) insig1 (ENSPNYG00000006738) en2a (ENSPNYG00000006771) ENSPNYG00000006806 shha (ENSPNYG00000006829) rnf32 (ENSPNYG00000006852) lmbr1 (ENSPNYG00000006907) nom1 (ENSPNYG00000006975) mnx1 (ENSPNYG00000007020) ube3c (ENSPNYG00000007048) dnajb6b (ENSPNYG00000007114) ptprn2 (ENSPNYG00000007142) ENSPNYG00000007211 ENSPNYG00000007248 P. nyererei MODERN SPECIES 337 ENSPNYG00000006331 slc48a1b (ENSPNYG00000006317) ENSPNYG00000006251 ENSPNYG00000006215 vdrb (ENSPNYG00000006182) ENSPNYG00000006141 eif4bb (ENSPNYG00000006114) krt18b (ENSPNYG00000006100) ENSPNYG00000005876 krt4 (ENSPNYG00000005817) VSTM2L (ENSPNYG00000005801) tgm2b (ENSPNYG00000005580) ENSPNYG00000005516 ENSPNYG00000005486 DLGAP4 (ENSPNYG00000005383) ENSPNYG00000005350 #22 ENSPNYG00000005337 LPIN3 (ENSPNYG00000005318) ENSPNYG00000005310 tpra1 (ENSPNYG00000005273) chchd6b (ENSPNYG00000005260) PLXNA1 (ENSPNYG00000005171) ENSPNYG00000005147 ENSPNYG00000005068 ENSPNYG00000005041 ENSPNYG00000004972 EVC2 (ENSPNYG00000004916) CYTL1 (ENSPNYG00000004893) msx1a (ENSPNYG00000004883) stx18 (ENSPNYG00000004873) NSG1 (ENSPNYG00000004856) Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 325 ENSNBRG00000017398 ENSNBRG00000017392 dipk2ab (ENSNBRG00000017380) ENSNBRG00000017362 CHST2 (ENSNBRG00000017352) trpc1 (ENSNBRG00000017334) pcolce2b (ENSNBRG00000017290) u2surp (ENSNBRG00000017162) ackr4b (ENSNBRG00000017128) acad11 (ENSNBRG00000017043) uba5 (ENSNBRG00000017021) nphp3 (ENSNBRG00000016979) ENSNBRG00000016962 KIAA1217 (ENSNBRG00000016840) ENSNBRG00000016814 tgif1 (ENSNBRG00000016803) #22 DLGAP1 (ENSNBRG00000016771) #23 ENSNBRG00000016758 htr5ab (ENSNBRG00000016748) insig1 (ENSNBRG00000016730) en2a (ENSNBRG00000016715) ENSNBRG00000016686 shha (ENSNBRG00000016664) rnf32 (ENSNBRG00000016547) lmbr1 (ENSNBRG00000016472) nom1 (ENSNBRG00000016429) mnx1 (ENSNBRG00000016406) ube3c (ENSNBRG00000016343) dnajb6b (ENSNBRG00000016327) ptprn2 (ENSNBRG00000016225) ENSNBRG00000016190 Lyretail cichlid MODERN SPECIES 296 PHF13 (ENSNBRG00000015059) slc48a1b (ENSNBRG00000015064) ENSNBRG00000015083 ENSNBRG00000015166 vdrb (ENSNBRG00000015262) ENSNBRG00000015279 ENSNBRG00000015286 eif4bb (ENSNBRG00000015331) krt18b (ENSNBRG00000015374) ENSNBRG00000015415 krt4 (ENSNBRG00000015649) VSTM2L (ENSNBRG00000015664) tgm2b (ENSNBRG00000015722) quo (ENSNBRG00000015934) DLGAP4 (ENSNBRG00000015992) ENSNBRG00000016064 #22 myl9a (ENSNBRG00000016080) LPIN3 (ENSNBRG00000016120) ENSNBRG00000016295 tpra1 (ENSNBRG00000016310) chchd6b (ENSNBRG00000016352) PLXNA1 (ENSNBRG00000016372) ENSNBRG00000016445 RACGAP1 (ENSNBRG00000016534) ENSNBRG00000016583 ENSNBRG00000016608 EVC2 (ENSNBRG00000016670) CYTL1 (ENSNBRG00000016729) msx1a (ENSNBRG00000016747) stx18 (ENSNBRG00000016763) NSG1 (ENSNBRG00000016782) Nile tilapia DUPLICATION Nile tilapia MODERN SPECIES 21 ENSONIG00000005881 plod2 (ENSONIG00000005883) dipk2ab (ENSONIG00000005895) SLC9A9 (ENSONIG00000005897) CHST2 (ENSONIG00000020455) trpc1 (ENSONIG00000005900) pcolce2b (ENSONIG00000005906) u2surp (ENSONIG00000005909) ackr4b (ENSONIG00000020456) acad11 (ENSONIG00000005913) uba5 (ENSONIG00000005917) nphp3 (ENSONIG00000005921) ENSONIG00000005929 ENSONIG00000005930 ENSONIG00000043116 tgif1 (ENSONIG00000032216) #22 DLGAP1 (ENSONIG00000005935) #23 htr5a (ENSONIG00000037517) insig1 (ENSONIG00000005939) en2a (ENSONIG00000032959) RBM33 (ENSONIG00000005941) shh (ENSONIG00000005944) rnf32 (ENSONIG00000005948) lmbr1 (ENSONIG00000005952) nom1 (ENSONIG00000005958) mnx1 (ENSONIG00000005962) ube3c (ENSONIG00000005968) dnajb6b (ENSONIG00000005984) ptprn2 (ENSONIG00000005989) ncapg2 (ENSONIG00000005990) ESYT2 (ENSONIG00000005994) Nile tilapia MODERN SPECIES 17 ENSONIG00000029268 DNAJC11 (ENSONIG00000019372) PHF13 (ENSONIG00000019374) slc48a1b (ENSONIG00000019375) ENSONIG00000021177 vdrb (ENSONIG00000019378) ENSONIG00000019379 eif4bb (ENSONIG00000019380) krt18b (ENSONIG00000019383) ENSONIG00000028930 ENSONIG00000019387 VSTM2L (ENSONIG00000019394) tgm2b (ENSONIG00000019395) quo (ENSONIG00000019398) DLGAP4 (ENSONIG00000019401) ENSONIG00000033555 #22 myl9a (ENSONIG00000006115) ENSONIG00000019405 ENSONIG00000021178 tpra1 (ENSONIG00000019409) chchd6b (ENSONIG00000019411) PLXNA1 (ENSONIG00000019413) ENSONIG00000019416 ENSONIG00000019419 ENSONIG00000019420 EVC2 (ENSONIG00000019422) CYTL1 (ENSONIG00000019423) msx1 (ENSONIG00000027536) stx18 (ENSONIG00000019426) NSG1 (ENSONIG00000019428) ENSONIG00000019430 Pomacentridae ANCESTRAL SPECIES 11 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Bicolor damselfish MODERN SPECIES 446 ackr4b (ENSSPAG00000001662) acad11 (ENSSPAG00000001571) uba5 (ENSSPAG00000001527) nphp3 (ENSSPAG00000001445) ENSSPAG00000001401 ENSSPAG00000001331 tgif1 (ENSSPAG00000001293) #22 DLGAP1 (ENSSPAG00000001260) #23 htr5ab (ENSSPAG00000001230) insig1 (ENSSPAG00000001199) en2a (ENSSPAG00000001183) RBM33 (ENSSPAG00000001152) shha (ENSSPAG00000001127) rnf32 (ENSSPAG00000001069) lmbr1 (ENSSPAG00000000975) nom1 (ENSSPAG00000000953) mnx1 (ENSSPAG00000000937) ube3c (ENSSPAG00000000849) dnajb6b (ENSSPAG00000000814) Pomacentridae_A ANCESTRAL SPECIES 8 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Spiny chromis MODERN SPECIES 25 plod2 (ENSAPOG00000011061) ENSAPOG00000000311 dipk2ab (ENSAPOG00000011108) SLC9A9 (ENSAPOG00000011158) CHST2 (ENSAPOG00000011185) trpc1 (ENSAPOG00000011253) pcolce2b (ENSAPOG00000000317) u2surp (ENSAPOG00000011345) ackr4b (ENSAPOG00000011367) acad11 (ENSAPOG00000011442) uba5 (ENSAPOG00000011497) nphp3 (ENSAPOG00000011604) ENSAPOG00000011619 ENSAPOG00000011635 ENSAPOG00000011667 tgif1 (ENSAPOG00000011675) #22 DLGAP1 (ENSAPOG00000011722) #23 htr5ab (ENSAPOG00000011758) insig1 (ENSAPOG00000011784) en2a (ENSAPOG00000011792) ENSAPOG00000011836 ENSAPOG00000001010 shha (ENSAPOG00000011867) rnf32 (ENSAPOG00000011950) lmbr1 (ENSAPOG00000012015) nom1 (ENSAPOG00000012073) mnx1 (ENSAPOG00000012104) ube3c (ENSAPOG00000012231) dnajb6b (ENSAPOG00000012279) ENSAPOG00000012309 Amphiprion ANCESTRAL SPECIES 7 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Clown anemonefish DUPLICATION Clown anemonefish MODERN SPECIES 1947 uba5 (ENSAOCG00000011087) nphp3 (ENSAOCG00000011047) ENSAOCG00000010976 ENSAOCG00000010946 ENSAOCG00000002818 tgif1 (ENSAOCG00000010870) #22 DLGAP1 (ENSAOCG00000002746) #23 Clown anemonefish MODERN SPECIES 619 vdrb (ENSAOCG00000011299) ENSAOCG00000011315 ENSAOCG00000011358 eif4bb (ENSAOCG00000000713) krt18b (ENSAOCG00000011400) ENSAOCG00000011413 krt4 (ENSAOCG00000011442) ENSAOCG00000011460 tgm2b (ENSAOCG00000011480) ENSAOCG00000011548 ENSAOCG00000011584 DLGAP4 (ENSAOCG00000011605) ENSAOCG00000002369 ENSAOCG00000011622 #22 myl9a (ENSAOCG00000011639) ENSAOCG00000011667 ENSAOCG00000011681 tpra1 (ENSAOCG00000011720) chchd6b (ENSAOCG00000011741) ENSAOCG00000011767 Orange clownfish DUPLICATION Orange clownfish MODERN SPECIES 14 zic4 (ENSAPEG00000017132) ENSAPEG00000017122 ENSAPEG00000017115 plod2 (ENSAPEG00000017014) dipk2ab (ENSAPEG00000016993) SLC9A9 (ENSAPEG00000016845) CHST2 (ENSAPEG00000016815) pcolce2b (ENSAPEG00000016780) trpc1 (ENSAPEG00000016726) u2surp (ENSAPEG00000016652) acad11 (ENSAPEG00000016555) uba5 (ENSAPEG00000016490) nphp3 (ENSAPEG00000016371) ENSAPEG00000016339 ENSAPEG00000016317 tgif1 (ENSAPEG00000016310) #22 DLGAP1 (ENSAPEG00000016268) #23 htr5ab (ENSAPEG00000016248) insig1 (ENSAPEG00000016227) en2a (ENSAPEG00000016214) ENSAPEG00000016208 ENSAPEG00000016186 shha (ENSAPEG00000016169) rnf32 (ENSAPEG00000016124) lmbr1 (ENSAPEG00000016028) nom1 (ENSAPEG00000015994) mnx1 (ENSAPEG00000015984) ube3c (ENSAPEG00000015902) dnajb6b (ENSAPEG00000015875) ptprn2 (ENSAPEG00000015791) ncapg2 (ENSAPEG00000015653) Orange clownfish MODERN SPECIES 20 DNAJC11 (ENSAPEG00000005093) PHF13 (ENSAPEG00000005075) slc48a1b (ENSAPEG00000005056) ENSAPEG00000004943 ENSAPEG00000004885 vdrb (ENSAPEG00000004846) ENSAPEG00000004756 eif4bb (ENSAPEG00000004732) krt18b (ENSAPEG00000004716) ENSAPEG00000004672 krt4 (ENSAPEG00000004660) VSTM2L (ENSAPEG00000004630) tgm2b (ENSAPEG00000004614) quo (ENSAPEG00000004593) DLGAP4 (ENSAPEG00000004576) ENSAPEG00000004566 #22 myl9a (ENSAPEG00000004556) ENSAPEG00000004538 ENSAPEG00000004483 tpra1 (ENSAPEG00000004436) chchd6b (ENSAPEG00000004392) PLXNA1 (ENSAPEG00000004272) ENSAPEG00000004161 ENSAPEG00000004110 ENSAPEG00000004014 EVC2 (ENSAPEG00000003882) CYTL1 (ENSAPEG00000003857) msx1a (ENSAPEG00000003843) stx18 (ENSAPEG00000003829) NSG1 (ENSAPEG00000003804) ENSAPEG00000003787 Percomorphaceae_C ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00490000043432 Eupercaria ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00490000043432 Tetraodontidae ANCESTRAL SPECIES 18 ENSGT00940000154200.B ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Tetraodon DUPLICATION Tetraodon MODERN SPECIES 21 zic1 (ENSTNIG00000012758) zic4 (ENSTNIG00000012759) ENSTNIG00000012760 plod2 (ENSTNIG00000012762) itga9 (ENSTNIG00000012761) dipk2ab (ENSTNIG00000012763) trpc1 (ENSTNIG00000012765) pcolce2b (ENSTNIG00000012766) u2surp (ENSTNIG00000012767) ackr4b (ENSTNIG00000000194) uba5 (ENSTNIG00000012768) nphp3 (ENSTNIG00000012769) ENSTNIG00000012770 KIAA1217 (ENSTNIG00000012771) OTUD1 (ENSTNIG00000012772) tgif1 (ENSTNIG00000012773) #22 DLGAP1 (ENSTNIG00000012774) #23 htr5ab (ENSTNIG00000012775) insig1 (ENSTNIG00000012776) en2a (ENSTNIG00000012777) ENSTNIG00000012778 ENSTNIG00000012779 shha (ENSTNIG00000012780) rnf32 (ENSTNIG00000012781) lmbr1 (ENSTNIG00000012782) nom1 (ENSTNIG00000012783) mnx1 (ENSTNIG00000012784) ube3c (ENSTNIG00000012785) dnajb6b (ENSTNIG00000012786) ENSTNIG00000005842 ncapg2 (ENSTNIG00000005843) Tetraodon MODERN SPECIES 2 PHF13 (ENSTNIG00000003623) slc48a1b (ENSTNIG00000001291) ENSTNIG00000003264 vdrb (ENSTNIG00000007031) ENSTNIG00000007191 eif4bb (ENSTNIG00000007192) krt18b (ENSTNIG00000007193) ENSTNIG00000007194 ENSTNIG00000000677 krt4 (ENSTNIG00000007195) VSTM2L (ENSTNIG00000018708) tgm2b (ENSTNIG00000018709) quo (ENSTNIG00000018710) ENSTNIG00000018711 DLGAP4 (ENSTNIG00000018712) ENSTNIG00000018713 #22 myl9a (ENSTNIG00000018714) LPIN3 (ENSTNIG00000018715) tpra1 (ENSTNIG00000018716) chchd6b (ENSTNIG00000004389) ENSTNIG00000004390 PLXNA1 (ENSTNIG00000003914) ENSTNIG00000010995 ENSTNIG00000010996 ENSTNIG00000010997 ENSTNIG00000010998 msx1a (ENSTNIG00000010999) stx18 (ENSTNIG00000011000) NSG1 (ENSTNIG00000011001) aggf1 (ENSTNIG00000011002) ENSTNIG00000011003 Fugu DUPLICATION Fugu MODERN SPECIES 10 ENSTRUG00000030744 DNAJC11 (ENSTRUG00000011091) PHF13 (ENSTRUG00000029969) slc48a1b (ENSTRUG00000022927) ENSTRUG00000011374 ENSTRUG00000011380 vdrb (ENSTRUG00000011576) ENSTRUG00000011718 eif4bb (ENSTRUG00000019563) krt18b (ENSTRUG00000011921) ENSTRUG00000012155 krt4 (ENSTRUG00000012183) ENSTRUG00000013046 tgm2b (ENSTRUG00000013049) DLGAP4 (ENSTRUG00000032251) ENSTRUG00000027746 #22 myl9a (ENSTRUG00000026669) LPIN3 (ENSTRUG00000004946) tpra1 (ENSTRUG00000004789) chchd6b (ENSTRUG00000032807) PLXNA1 (ENSTRUG00000003572) ENSTRUG00000016117 MINAR1 (ENSTRUG00000016108) evc (ENSTRUG00000016087) ENSTRUG00000025612 msx1a (ENSTRUG00000016043) stx18 (ENSTRUG00000023576) NSG1 (ENSTRUG00000016014) aggf1 (ENSTRUG00000015966) tacc1a (ENSTRUG00000015943) loxl2a (ENSTRUG00000015885) Fugu MODERN SPECIES 1 zic4 (ENSTRUG00000017765) ENSTRUG00000017774 plod2 (ENSTRUG00000017777) dipk2ab (ENSTRUG00000017793) CHST2 (ENSTRUG00000023815) trpc1 (ENSTRUG00000017798) pcolce2b (ENSTRUG00000017807) u2surp (ENSTRUG00000017810) acad11 (ENSTRUG00000022835) ackr4b (ENSTRUG00000017829) uba5 (ENSTRUG00000017830) nphp3 (ENSTRUG00000017819) ENSTRUG00000017838 KIAA1217 (ENSTRUG00000017841) ENSTRUG00000017846 tgif1 (ENSTRUG00000020687) #22 DLGAP1 (ENSTRUG00000017849) #23 htr5ab (ENSTRUG00000017860) insig1 (ENSTRUG00000017863) en2a (ENSTRUG00000017873) RBM33 (ENSTRUG00000025359) shha (ENSTRUG00000025705) rnf32 (ENSTRUG00000010576) lmbr1 (ENSTRUG00000010286) nom1 (ENSTRUG00000010239) mnx1 (ENSTRUG00000010178) ube3c (ENSTRUG00000009905) dnajb6b (ENSTRUG00000009824) ptprn2 (ENSTRUG00000009798) ncapg2 (ENSTRUG00000021691) plxdc2b (ENSTRUG00000008838) Eupecaria_A ANCESTRAL SPECIES 19 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00490000043432 Ballan wrasse MODERN SPECIES 411 dipk2ab (ENSLBEG00000027111) ENSLBEG00000026714 CHST2 (ENSLBEG00000026459) trpc1 (ENSLBEG00000026442) pcolce2b (ENSLBEG00000026413) u2surp (ENSLBEG00000026284) ackr4b (ENSLBEG00000026206) acad11 (ENSLBEG00000026175) uba5 (ENSLBEG00000026148) nphp3 (ENSLBEG00000026093) ENSLBEG00000026070 KIAA1217 (ENSLBEG00000025978) OTUD1 (ENSLBEG00000025942) tgif1 (ENSLBEG00000025930) #22 ENSLBEG00000025911 #23 Eupecaria_B ANCESTRAL SPECIES 19 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00490000043432 Perciformes ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00490000043432 Cottioidei ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00940000170921 ENSGT00490000043432 Lumpfish DUPLICATION Lumpfish MODERN SPECIES 12 zic4 (ENSCLMG00005019640) ENSCLMG00005019639 plod2 (ENSCLMG00005011841) dipk2ab (ENSCLMG00005011788) SLC9A9 (ENSCLMG00005011786) CHST2 (ENSCLMG00005011785) trpc1 (ENSCLMG00005011778) pcolce2b (ENSCLMG00005011776) u2surp (ENSCLMG00005009769) ackr4b (ENSCLMG00005009762) acad11 (ENSCLMG00005008776) uba5 (ENSCLMG00005008750) nphp3 (ENSCLMG00005008747) ENSCLMG00005022236 ENSCLMG00005022235 tgif1 (ENSCLMG00005022234) #22 DLGAP1 (ENSCLMG00005022174) #23 htr5ab (ENSCLMG00005022165) insig1 (ENSCLMG00005022163) en2a (ENSCLMG00005022162) ENSCLMG00005022161 shha (ENSCLMG00005022160) rnf32 (ENSCLMG00005022159) lmbr1 (ENSCLMG00005022138) nom1 (ENSCLMG00005022135) mnx1 (ENSCLMG00005022134) ube3c (ENSCLMG00005022010) dnajb6b (ENSCLMG00005021990) ptprn2 (ENSCLMG00005021988) ncapg2 (ENSCLMG00005021987) ESYT2 (ENSCLMG00005021968) Lumpfish MODERN SPECIES 20 HDAC7 (ENSCLMG00005017380) ENSCLMG00005017379 slc48a1b (ENSCLMG00005017377) ube2r2 (ENSCLMG00005017375) nudt2 (ENSCLMG00005017374) rfesd (ENSCLMG00005017373) ENSCLMG00005017372 ENSCLMG00005017370 ENSCLMG00005017369 ENSCLMG00005017368 ENSCLMG00005017366 VSTM2L (ENSCLMG00005017365) quo (ENSCLMG00005016539) ENSCLMG00005016531 ENSCLMG00005016530 ENSCLMG00005016529 #22 myl9a (ENSCLMG00005016523) ENSCLMG00005016426 ENSCLMG00005016425 ENSCLMG00005016424 glrx (ENSCLMG00005016423) ell2 (ENSCLMG00005016419) ENSCLMG00005016417 pcsk1 (ENSCLMG00005016408) ENSCLMG00005016407 ENSCLMG00005016406 ENSCLMG00005016398 ENSCLMG00005016396 gnrh2 (ENSCLMG00005016392) ptpra (ENSCLMG00005011897) idh3b (ENSCLMG00005011834) Perciformes_a ANCESTRAL SPECIES 22 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Channel bull blenny MODERN SPECIES 12 ENSCGOG00000020605 plod2 (ENSCGOG00000020724) dipk2ab (ENSCGOG00000022562) SLC9A9 (ENSCGOG00000022565) CHST2 (ENSCGOG00000022571) trpc1 (ENSCGOG00000022576) pcolce2b (ENSCGOG00000022663) u2surp (ENSCGOG00000022700) acad11 (ENSCGOG00000023054) ackr4b (ENSCGOG00000023143) uba5 (ENSCGOG00000023152) nphp3 (ENSCGOG00000023209) ENSCGOG00000023250 ENSCGOG00000023254 ENSCGOG00000023262 ENSCGOG00000023266 #22 DLGAP1 (ENSCGOG00000002386) #23 htr5ab (ENSCGOG00000002495) insig1 (ENSCGOG00000002498) en2a (ENSCGOG00000002509) ENSCGOG00000002514 shha (ENSCGOG00000002520) rnf32 (ENSCGOG00000002524) lmbr1 (ENSCGOG00000002541) nom1 (ENSCGOG00000002772) mnx1 (ENSCGOG00000002799) ube3c (ENSCGOG00000002847) dnajb6b (ENSCGOG00000003496) ptprn2 (ENSCGOG00000003507) ncapg2 (ENSCGOG00000003619) ESYT2 (ENSCGOG00000003692) Pike perch MODERN SPECIES 197 ENSSLUG00000024194 plod2 (ENSSLUG00000020982) dipk2ab (ENSSLUG00000020787) SLC9A9 (ENSSLUG00000020779) CHST2 (ENSSLUG00000020776) trpc1 (ENSSLUG00000020768) pcolce2b (ENSSLUG00000020764) u2surp (ENSSLUG00000020069) ackr4b (ENSSLUG00000020036) acad11 (ENSSLUG00000019867) uba5 (ENSSLUG00000019556) nphp3 (ENSSLUG00000019530) ENSSLUG00000019518 ENSSLUG00000019216 ENSSLUG00000019194 tgif1 (ENSSLUG00000019190) #22 DLGAP1 (ENSSLUG00000018955) #23 htr5ab (ENSSLUG00000018922) Eupecaria_C ANCESTRAL SPECIES 19 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Gilthead seabream MODERN SPECIES 10 zic4 (ENSSAUG00010021791) ENSSAUG00010021788 plod2 (ENSSAUG00010016232) dipk2ab (ENSSAUG00010016141) SLC9A9 (ENSSAUG00010016137) CHST2 (ENSSAUG00010016134) trpc1 (ENSSAUG00010016036) pcolce2b (ENSSAUG00010015811) u2surp (ENSSAUG00010015790) CCR11 (ENSSAUG00010015782) acad11 (ENSSAUG00010013683) uba5 (ENSSAUG00010013645) nphp3 (ENSSAUG00010013640) ENSSAUG00010013633 ENSSAUG00010013626 tgif1 (ENSSAUG00010013625) #22 DLGAP1 (ENSSAUG00010013463) #23 htr5ab (ENSSAUG00010013444) insig1 (ENSSAUG00010013442) en2a (ENSSAUG00010013440) ENSSAUG00010013437 shha (ENSSAUG00010013434) rnf32 (ENSSAUG00010013431) lmbr1 (ENSSAUG00010013242) nom1 (ENSSAUG00010013227) mnx1 (ENSSAUG00010013225) ube3c (ENSSAUG00010013223) dnajb6b (ENSSAUG00010013221) ptprn2 (ENSSAUG00010013215) ncapg2 (ENSSAUG00010013205) ESYT2 (ENSSAUG00010013124) Eupercaria_incertae_sedis ANCESTRAL SPECIES 17 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Large yellow croaker MODERN SPECIES 494 ENSLCRG00005018782 plod2 (ENSLCRG00005012767) dipk2ab (ENSLCRG00005012698) SLC9A9 (ENSLCRG00005012694) CHST2 (ENSLCRG00005012693) trpc1 (ENSLCRG00005012627) pcolce2b (ENSLCRG00005012585) u2surp (ENSLCRG00005012549) ackr4b (ENSLCRG00005023248) acad11 (ENSLCRG00005023156) uba5 (ENSLCRG00005023126) nphp3 (ENSLCRG00005023116) ENSLCRG00005023114 ENSLCRG00005023094 ENSLCRG00005023086 tgif1 (ENSLCRG00005023084) #22 ENSLCRG00005023083 DLGAP1 (ENSLCRG00005023061) #23 htr5ab (ENSLCRG00005023060) insig1 (ENSLCRG00005023059) en2a (ENSLCRG00005023058) RBM33 (ENSLCRG00005023057) shha (ENSLCRG00005023055) rnf32 (ENSLCRG00005023054) lmbr1 (ENSLCRG00005023047) nom1 (ENSLCRG00005023042) mnx1 (ENSLCRG00005023041) ube3c (ENSLCRG00005023027) ptprn2 (ENSLCRG00005023019) ncapg2 (ENSLCRG00005023017) ESYT2 (ENSLCRG00005022854) European seabass MODERN SPECIES 8 ENSDLAG00005032171 PLOD2 (ENSDLAG00005009017) dipk2ab (ENSDLAG00005009352) SLC9A9 (ENSDLAG00005009359) CHST2 (ENSDLAG00005009391) trpc1 (ENSDLAG00005009394) pcolce2b (ENSDLAG00005009402) ACAD11 (ENSDLAG00005009448) ENSDLAG00005009833 CCRL1A (ENSDLAG00005033569) UBA5 (ENSDLAG00005010563) NPHP3 (ENSDLAG00005010863) ENSDLAG00005011090 ENSDLAG00005011100 ENSDLAG00005011208 tgif1 (ENSDLAG00005028645) #22 ENSDLAG00005011220 #23 htr5ab (ENSDLAG00005011430) INSIG1 (ENSDLAG00005011438) en2a (ENSDLAG00005030214) RBM33 (ENSDLAG00005011462) shha (ENSDLAG00005011469) lmbr1 (ENSDLAG00005011502) nom1 (ENSDLAG00005011665) mnx1 (ENSDLAG00005011783) ube3c (ENSDLAG00005011787) dnajb6b (ENSDLAG00005011824) ptprn2 (ENSDLAG00005030092) ncapg2 (ENSDLAG00005011837) ESYT2 (ENSDLAG00005011896) DYNC2I1 (ENSDLAG00005012449) Percomorphaceae_D ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Anabantaria ANCESTRAL SPECIES 22 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Zig-zag eel MODERN SPECIES 12 zic4 (ENSMAMG00000002664) ENSMAMG00000002672 plod2 (ENSMAMG00000002720) dipk2ab (ENSMAMG00000002858) CHST2 (ENSMAMG00000002890) trpc1 (ENSMAMG00000002921) pcolce2b (ENSMAMG00000002967) U2SURP (ENSMAMG00000003004) ACAD11 (ENSMAMG00000003173) ACKR4 (ENSMAMG00000003422) uba5 (ENSMAMG00000003437) nphp3 (ENSMAMG00000003466) ENSMAMG00000003561 ENSMAMG00000003575 ENSMAMG00000003703 tgif1 (ENSMAMG00000003708) #22 ENSMAMG00000003718 #23 htr5ab (ENSMAMG00000003749) insig1 (ENSMAMG00000003761) en2a (ENSMAMG00000003793) ENSMAMG00000003808 shha (ENSMAMG00000003867) rnf32 (ENSMAMG00000003885) lmbr1 (ENSMAMG00000004019) nom1 (ENSMAMG00000004118) mnx1 (ENSMAMG00000004138) ube3c (ENSMAMG00000004175) ENSMAMG00000025216 dnajb6b (ENSMAMG00000004261) ptprn2 (ENSMAMG00000004302) ncapg2 (ENSMAMG00000004363) Anabantoidei ANCESTRAL SPECIES 20 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Siamese fighting fish MODERN SPECIES 15 ENSBSLG00000005238 plod2 (ENSBSLG00000005775) dipk2ab (ENSBSLG00000008871) SLC9A9 (ENSBSLG00000008879) CHST2 (ENSBSLG00000008929) trpc1 (ENSBSLG00000008993) pcolce2b (ENSBSLG00000009239) u2surp (ENSBSLG00000009395) acad11 (ENSBSLG00000011006) ackr4b (ENSBSLG00000011487) uba5 (ENSBSLG00000011490) nphp3 (ENSBSLG00000011516) ENSBSLG00000012405 KIAA1217 (ENSBSLG00000000568) ENSBSLG00000000695 tgif1 (ENSBSLG00000000697) #22 DLGAP1 (ENSBSLG00000000738) #23 htr5ab (ENSBSLG00000001206) insig1 (ENSBSLG00000001232) en2a (ENSBSLG00000001248) RBM33 (ENSBSLG00000001275) shha (ENSBSLG00000001307) rnf32 (ENSBSLG00000001314) lmbr1 (ENSBSLG00000001380) nom1 (ENSBSLG00000001536) mnx1 (ENSBSLG00000001568) ube3c (ENSBSLG00000001591) dnajb6b (ENSBSLG00000001665) ptprn2 (ENSBSLG00000001696) ncapg2 (ENSBSLG00000001796) ESYT2 (ENSBSLG00000001916) Climbing perch DUPLICATION Climbing perch MODERN SPECIES 18 ENSATEG00000024129 ENSATEG00000029677 ENSATEG00000024113 ENSATEG00000024108 slc48a1b (ENSATEG00000024104) ENSATEG00000024098 ENSATEG00000024084 vdrb (ENSATEG00000024069) ENSATEG00000024061 eif4bb (ENSATEG00000024049) ENSATEG00000024043 ENSATEG00000024035 ENSATEG00000027024 ENSATEG00000024028 ENSATEG00000024014 ENSATEG00000024012 #22 ENSATEG00000027839 ENSATEG00000023997 ENSATEG00000023991 tpra1 (ENSATEG00000023987) chchd6b (ENSATEG00000023983) ENSATEG00000023967 ENSATEG00000023955 ENSATEG00000023954 ENSATEG00000023945 EVC2 (ENSATEG00000023926) CYTL1 (ENSATEG00000023920) msx1a (ENSATEG00000023917) stx18 (ENSATEG00000023909) NSG1 (ENSATEG00000023904) ENSATEG00000023889 Climbing perch MODERN SPECIES 11 ENSATEG00000026408 plod2 (ENSATEG00000006579) dipk2ab (ENSATEG00000006549) SLC9A9 (ENSATEG00000006532) CHST2 (ENSATEG00000006518) trpc1 (ENSATEG00000006446) pcolce2b (ENSATEG00000006332) U2SURP (ENSATEG00000006321) ACKR4 (ENSATEG00000006308) ACAD11 (ENSATEG00000006297) uba5 (ENSATEG00000006252) nphp3 (ENSATEG00000006119) ENSATEG00000006086 ENSATEG00000006030 ENSATEG00000026723 tgif1 (ENSATEG00000005965) #22 ENSATEG00000005910 #23 htr5ab (ENSATEG00000005887) insig1 (ENSATEG00000028817) en2a (ENSATEG00000027474) RBM33 (ENSATEG00000005820) shha (ENSATEG00000025820) rnf32 (ENSATEG00000005689) lmbr1 (ENSATEG00000005593) nom1 (ENSATEG00000005405) mnx1 (ENSATEG00000005376) ube3c (ENSATEG00000005285) dnajb6b (ENSATEG00000005245) ptprn2 (ENSATEG00000005096) ncapg2 (ENSATEG00000005081) ESYT2 (ENSATEG00000005070) Carangaria ANCESTRAL SPECIES 21 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Carangaria_A ANCESTRAL SPECIES 15 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Seriola ANCESTRAL SPECIES 27 ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT00940000160993 ENSGT01030000234667.a.a.a.b.a ENSGT00940000164635 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Greater amberjack MODERN SPECIES 217 ENSSDUG00000005712 plod2 (ENSSDUG00000005733) dipk2ab (ENSSDUG00000005818) SLC9A9 (ENSSDUG00000005834) CHST2 (ENSSDUG00000005866) trpc1 (ENSSDUG00000005892) pcolce2b (ENSSDUG00000005953) u2surp (ENSSDUG00000006136) acad11 (ENSSDUG00000006341) ackr4b (ENSSDUG00000006395) uba5 (ENSSDUG00000006405) nphp3 (ENSSDUG00000006427) ENSSDUG00000006491 ENSSDUG00000006516 ENSSDUG00000006636 tgif1 (ENSSDUG00000006649) #22 DLGAP1 (ENSSDUG00000006673) #23 htr5ab (ENSSDUG00000006689) insig1 (ENSSDUG00000006701) en2a (ENSSDUG00000006720) ENSSDUG00000006739 shha (ENSSDUG00000006770) rnf32 (ENSSDUG00000006783) lmbr1 (ENSSDUG00000006805) nom1 (ENSSDUG00000006834) mnx1 (ENSSDUG00000006855) ube3c (ENSSDUG00000006876) dnajb6b (ENSSDUG00000006953) ptprn2 (ENSSDUG00000006985) ncapg2 (ENSSDUG00000007085) ESYT2 (ENSSDUG00000007135) Yellowtail amberjack MODERN SPECIES 3001 dipk2ab (ENSSLDG00000022834) ENSSLDG00000022560 CHST2 (ENSSLDG00000022514) trpc1 (ENSSLDG00000022474) pcolce2b (ENSSLDG00000022447) u2surp (ENSSLDG00000022385) ackr4b (ENSSLDG00000022372) ENSSLDG00000022254 uba5 (ENSSLDG00000022220) nphp3 (ENSSLDG00000022183) ENSSLDG00000022170 ENSSLDG00000022096 ENSSLDG00000022077 tgif1 (ENSSLDG00000022071) #22 DLGAP1 (ENSSLDG00000022045) #23 htr5ab (ENSSLDG00000022034) insig1 (ENSSLDG00000022011) en2a (ENSSLDG00000022001) ENSSLDG00000021965 shha (ENSSLDG00000021952) rnf32 (ENSSLDG00000021888) lmbr1 (ENSSLDG00000021831) nom1 (ENSSLDG00000021812) mnx1 (ENSSLDG00000021802) ube3c (ENSSLDG00000021749) dnajb6b (ENSSLDG00000021728) ptprn2 (ENSSLDG00000021691) ncapg2 (ENSSLDG00000021673) ESYT2 (ENSSLDG00000021583) Barramundi perch DUPLICATION Barramundi perch MODERN SPECIES 497 ENSLCAG00010020650 KIAA1217 (ENSLCAG00010020662) ENSLCAG00010020677 tgif1 (ENSLCAG00010020680) #22 DLGAP1 (ENSLCAG00010020683) #23 Barramundi perch MODERN SPECIES 71 DNAJC11 (ENSLCAG00010003257) PHF13 (ENSLCAG00010003251) slc48a1b (ENSLCAG00010003247) ENSLCAG00010003245 ENSLCAG00010003218 vdrb (ENSLCAG00010003182) ENSLCAG00010003160 eif4bb (ENSLCAG00010003151) krt18b (ENSLCAG00010003146) zgc:158846 (ENSLCAG00010003142) krt4 (ENSLCAG00010003137) VSTM2L (ENSLCAG00010003134) tgm2b (ENSLCAG00010003040) quo (ENSLCAG00010003016) ENSLCAG00010003005 ENSLCAG00010003000 #22 myl9a (ENSLCAG00010002988) LPIN3 (ENSLCAG00010002985) ENSLCAG00010002982 tpra1 (ENSLCAG00010002965) chchd6b (ENSLCAG00010002959) PLXNA1 (ENSLCAG00010002349) RACGAP1 (ENSLCAG00010002170) ENSLCAG00010002156 EVC (ENSLCAG00010002152) EVC2 (ENSLCAG00010002140) ENSLCAG00010002136 msx1a (ENSLCAG00010002130) stx18 (ENSLCAG00010002126) NSG1 (ENSLCAG00010002120) Pleuronectoidei ANCESTRAL SPECIES 12 ENSGT00940000165699.B ENSGT01030000234558.A.a.b ENSGT00520000055625.b ENSGT00940000160094 ENSGT00940000161292 ENSGT01060000248594.f ENSGT00940000157649 ENSGT00390000010687.a.a ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT01010000222287.B.a.b.a ENSGT00580000081600.c.a ENSGT00940000159935.g.b ENSGT00530000063891.cc ENSGT00940000159119.b.f.a ENSGT00390000003759 ENSGT00390000007809.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT00940000166388 ENSGT00940000154095.b.a.a.b ENSGT00490000043432 ENSGT00940000156086.d Tongue sole MODERN SPECIES 13 ENSCSEG00000001169 msl2b (ENSCSEG00000001158) tnfsf10 (ENSCSEG00000001152) nceh1b.1 (ENSCSEG00000001133) ENSCSEG00000001123 ENSCSEG00000001120 emc9 (ENSCSEG00000001114) RPL35 (ENSCSEG00000001073) ackr4b (ENSCSEG00000001068) acad11 (ENSCSEG00000001058) uba5 (ENSCSEG00000001047) nphp3 (ENSCSEG00000001034) ENSCSEG00000001030 ENSCSEG00000001019 OTUD1 (ENSCSEG00000001015) tgif1 (ENSCSEG00000001011) #22 DLGAP1 (ENSCSEG00000001005) #23 ENSCSEG00000001001 insig1 (ENSCSEG00000000994) en2a (ENSCSEG00000000982) ENSCSEG00000000979 ENSCSEG00000000974 shha (ENSCSEG00000000971) rnf32 (ENSCSEG00000000962) lmbr1 (ENSCSEG00000000950) nom1 (ENSCSEG00000000932) mnx1 (ENSCSEG00000000929) ube3c (ENSCSEG00000000910) dnajb6b (ENSCSEG00000000897) DYNC2I1 (ENSCSEG00000000860) ESYT2 (ENSCSEG00000000845) Turbot DUPLICATION Turbot MODERN SPECIES 18 ENSSMAG00000029922 ENSSMAG00000007417 ENSSMAG00000007473 slc48a1b (ENSSMAG00000022408) ENSSMAG00000007491 ENSSMAG00000007505 vdrb (ENSSMAG00000007590) ENSSMAG00000007612 eif4bb (ENSSMAG00000007678) ENSSMAG00000007743 ENSSMAG00000007716 ENSSMAG00000007783 ENSSMAG00000007818 ENSSMAG00000007856 ENSSMAG00000024310 ENSSMAG00000007942 #22 ENSSMAG00000007975 ENSSMAG00000008103 tpra1 (ENSSMAG00000008037) chchd6b (ENSSMAG00000008111) ENSSMAG00000008138 ENSSMAG00000008240 ENSSMAG00000008306 EVC2 (ENSSMAG00000008373) CYTL1 (ENSSMAG00000031263) msx1a (ENSSMAG00000027473) ENSSMAG00000008680 stx18 (ENSSMAG00000008474) NSG1 (ENSSMAG00000008492) ENSSMAG00000008511 ENSSMAG00000008550 Turbot MODERN SPECIES 13 zic4 (ENSSMAG00000012856) ENSSMAG00000012845 plod2 (ENSSMAG00000012723) dipk2ab (ENSSMAG00000012685) SLC9A9 (ENSSMAG00000012633) CHST2 (ENSSMAG00000012627) trpc1 (ENSSMAG00000012577) pcolce2b (ENSSMAG00000012554) U2SURP (ENSSMAG00000012475) ACKR4 (ENSSMAG00000012469) ACAD11 (ENSSMAG00000012381) uba5 (ENSSMAG00000012314) nphp3 (ENSSMAG00000012259) ENSSMAG00000036433 ENSSMAG00000012090 tgif1 (ENSSMAG00000012077) #22 ENSSMAG00000012051 #23 htr5ab (ENSSMAG00000010887) insig1 (ENSSMAG00000010907) en2a (ENSSMAG00000010933) RBM33 (ENSSMAG00000010943) shha (ENSSMAG00000010967) rnf32 (ENSSMAG00000010975) lmbr1 (ENSSMAG00000010987) nom1 (ENSSMAG00000011047) mnx1 (ENSSMAG00000011083) ube3c (ENSSMAG00000011093) dnajb6b (ENSSMAG00000011142) ptprn2 (ENSSMAG00000011170) ncapg2 (ENSSMAG00000011184) ESYT2 (ENSSMAG00000011212) Tiger tail seahorse DUPLICATION Tiger tail seahorse MODERN SPECIES 172 ENSHCOG00000010281 slc22a13b (ENSHCOG00000010371) ackr4b (ENSHCOG00000010387) acad11 (ENSHCOG00000010408) ENSHCOG00000010481 uba5 (ENSHCOG00000010535) nphp3 (ENSHCOG00000010601) KIAA1217 (ENSHCOG00000010620) OTUD1 (ENSHCOG00000010630) tgif1 (ENSHCOG00000010633) #22 DLGAP1 (ENSHCOG00000010694) #23 Tiger tail seahorse MODERN SPECIES 295 ENSHCOG00000010352 vdrb (ENSHCOG00000010402) ENSHCOG00000000324 ENSHCOG00000010547 eif4bb (ENSHCOG00000010594) krt18b (ENSHCOG00000010617) ENSHCOG00000010637 ENSHCOG00000010663 krt4 (ENSHCOG00000010673) krt4 (ENSHCOG00000010683) VSTM2L (ENSHCOG00000010706) tgm2b (ENSHCOG00000011022) quo (ENSHCOG00000011096) DLGAP4 (ENSHCOG00000011110) DLGAP4 (ENSHCOG00000011152) ENSHCOG00000011160 #22 myl9a (ENSHCOG00000011173) LPIN3 (ENSHCOG00000011206) ENSHCOG00000011218 tpra1 (ENSHCOG00000011408) chchd6b (ENSHCOG00000011434) PLXNA1 (ENSHCOG00000011477) ENSHCOG00000011525 ENSHCOG00000011537 ENSHCOG00000011570 EVC2 (ENSHCOG00000011647) CYTL1 (ENSHCOG00000011663) msx1a (ENSHCOG00000011665) stx18 (ENSHCOG00000011672) NSG1 (ENSHCOG00000011677) aggf1 (ENSHCOG00000011684) Otomorpha ANCESTRAL SPECIES 120 ENSGT00940000157567 ENSGT00940000165597 ENSGT00440000033408.a.a ENSGT00940000162556.B ENSGT00940000159257 ENSGT00730000111180 ENSGT00390000005489 ENSGT00950000183138.a.a.b.u ENSGT01030000234667.a.a.a.b.a ENSGT00940000160993 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 Clupeiformes ANCESTRAL SPECIES 664 ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 Denticle herring MODERN SPECIES 11 GRIK4 (ENSDCDG00000001695) ENSDCDG00000001718 ENSDCDG00000001721 ENSDCDG00000001724 ENSDCDG00000001726 cbl (ENSDCDG00000001732) mcamb (ENSDCDG00000001742) ENSDCDG00000001745 RNF26 (ENSDCDG00000001746) c1qtnf5 (ENSDCDG00000001747) KMT2A (ENSDCDG00000001749) UBE4A (ENSDCDG00000001771) ENSDCDG00000001790 ENSDCDG00000001799 OTUD1 (ENSDCDG00000001815) tgif1 (ENSDCDG00000001816) #22 DLGAP1 (ENSDCDG00000001820) #23 ENSDCDG00000001901 ralaa (ENSDCDG00000001902) CDK13 (ENSDCDG00000001904) sugct (ENSDCDG00000001911) ENSDCDG00000001913 inhbaa (ENSDCDG00000001916) eci2 (ENSDCDG00000001921) ENSDCDG00000001955 SORL1 (ENSDCDG00000002140) ENSDCDG00000003263 bco2b (ENSDCDG00000003366) sdhda (ENSDCDG00000003936) ENSDCDG00000003943 ENSDCDG00000004107 Otophysi ANCESTRAL SPECIES 35 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT00940000160982 ENSGT00390000011379 ENSGT00400000023815 ENSGT00550000075074 ENSGT00670000098076 ENSGT00940000158667 ENSGT00940000155807.a ENSGT00940000175338 ENSGT01100000263571.i.b ENSGT00390000001912.e ENSGT00950000183098.b.a.a ENSGT00530000063693.a.b ENSGT00720000108873 ENSGT00390000005996.a Cyprinoidei ANCESTRAL SPECIES 124 ENSGT00390000015159.b.a ENSGT00940000155285.b.j.a.b ENSGT00390000012189.c.b ENSGT00390000009802.b ENSGT00390000011176 ENSGT00940000156175 ENSGT00390000000481 ENSGT00390000000805 ENSGT00390000000626 ENSGT00940000157001 ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT00940000160982 ENSGT00390000011379 ENSGT00400000023815 ENSGT00550000075074 ENSGT00670000098076 ENSGT00940000158667 ENSGT00940000175338 ENSGT01100000263571.i.b.d ENSGT00940000155807.a ENSGT01100000263571.i.b.c ENSGT00390000001912.e ENSGT00950000183098.b.a.a ENSGT00530000063693.a.b ENSGT00720000108873 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 98 ENSGT00940000156175.e.b ENSGT00390000000481.l ENSGT00390000000805.ib ENSGT00390000000626.c ENSGT00940000157001.g ENSGT00940000156177.b ENSGT00940000156398.h ENSGT01100000263537.b.a.a.b.b.e ENSGT00940000156098.a.m ENSGT00510000049635.a.a.a ENSGT00940000155230.`c #22 ENSGT00940000156220.k.h #23 ENSGT00940000160982.x ENSGT00390000011379 ENSGT00400000023815 ENSGT00550000075074.f ENSGT00670000098076.e ENSGT00940000158667.f ENSGT00940000155807.a.c.a ENSGT01100000263571.i.b.c.a ENSGT00390000001912.e.f ENSGT00950000183098.b.a.a.s ENSGT00530000063693.a.b ENSGT00720000108873.e ENSGT00390000011717.o.a.a ENSGT00940000156908.u.a.b Cyprininae_a ANCESTRAL SPECIES 19 ENSGT00940000155285.b.j.a.b.a ENSGT00390000012189.c.b.d ENSGT00390000009802.b.e.a ENSGT00940000156175.e.b ENSGT00960000187176 ENSGT00940000156175.f ENSGT00390000000481.l ENSGT00390000000805.ib ENSGT00390000000626.c ENSGT00940000157001.g ENSGT00940000156177.b ENSGT00940000156398.h ENSGT01100000263537.b.a.a.b.b.e ENSGT00940000156098.a.m ENSGT00510000049635.a.a.a ENSGT00940000155230.`c #22 ENSGT00940000156220.k.h #23 ENSGT00940000160982.x ENSGT00390000011379.o.a ENSGT00550000075074.f ENSGT00670000098076.e ENSGT00940000158667.f ENSGT00940000155807.a.c.a ENSGT01100000263571.i.b.c.a ENSGT00390000001912.e.f ENSGT00950000183098.b.a.a.s ENSGT00530000063693.a.b ENSGT00720000108873.e ENSGT00390000011717.o.a.a ENSGT00940000156908.u.a.b ENSGT00940000154977.o Golden-line barbel MODERN SPECIES 121 fam49bb (ENSSGRG00000054504) myca (ENSSGRG00000054500) ankha (ENSSGRG00000054451) ENSSGRG00000054450 ENSSGRG00000054448 ENSSGRG00000054446 vps41 (ENSSGRG00000054323) cdv3 (ENSSGRG00000054308) ENSSGRG00000054307 topbp1 (ENSSGRG00000054234) uba5 (ENSSGRG00000054231) nphp3 (ENSSGRG00000054230) ENSSGRG00000054229 ENSSGRG00000054228 ENSSGRG00000054226 tgif1 (ENSSGRG00000054225) #22 ENSSGRG00000054224 #23 pdcd6 (ENSSGRG00000054220) rec8b (ENSSGRG00000054219) si:ch211-196f5.2 (ENSSGRG00000054218) IPO4 (ENSSGRG00000053979) nanog (ENSSGRG00000053971) tm9sf1 (ENSSGRG00000053969) fen1 (ENSSGRG00000053968) ENSSGRG00000053967 ENSSGRG00000053966 pck2 (ENSSGRG00000053964) psme1 (ENSSGRG00000053963) ENSSGRG00000053962 dcaf11 (ENSSGRG00000053826) ube2wb (ENSSGRG00000053821) Common carp reference MODERN SPECIES 40 ENSCCRG00000068607 myca (ENSCCRG00000053208) ENSCCRG00000074550 ankha (ENSCCRG00000014560) ENSCCRG00000054025 ENSCCRG00000015358 vps41 (ENSCCRG00000014865) cdv3 (ENSCCRG00000065262) ENSCCRG00000028743 topbp1 (ENSCCRG00000048924) uba5 (ENSCCRG00000061266) nphp3 (ENSCCRG00000018255) ENSCCRG00000018230 ENSCCRG00000017814 ENSCCRG00000054055 tgif1 (ENSCCRG00000016249) #22 ENSCCRG00000062682 #23 pdcd6 (ENSCCRG00000014296) rec8b (ENSCCRG00000014377) si:ch211-196f5.2 (ENSCCRG00000007717) ENSCCRG00000020638 nanog (ENSCCRG00000060425) ENSCCRG00000023636 ENSCCRG00000023627 ENSCCRG00000039432 ENSCCRG00000073305 ENSCCRG00000067252 ENSCCRG00000050499 ENSCCRG00000062650 ENSCCRG00000054495 ENSCCRG00000051161 Goldfish MODERN SPECIES 16 ENSCARG00000056898 myc (ENSCARG00000056880) ankha (ENSCARG00000056356) ENSCARG00000056263 otulina (ENSCARG00000056241) POU6F2 (ENSCARG00000056161) vps41 (ENSCARG00000054045) cdv3 (ENSCARG00000053848) ENSCARG00000053840 topbp1 (ENSCARG00000053303) uba5 (ENSCARG00000052644) nphp3 (ENSCARG00000052550) ENSCARG00000052518 ENSCARG00000052161 ENSCARG00000052116 tgif1 (ENSCARG00000052093) #22 DLGAP1 (ENSCARG00000051592) #23 pdcd6 (ENSCARG00000051447) IPO4 (ENSCARG00000062006) nanog (ENSCARG00000061980) tm9sf1 (ENSCARG00000061844) fen1 (ENSCARG00000061803) ENSCARG00000061792 ENSCARG00000061754 pck2 (ENSCARG00000061646) psme1 (ENSCARG00000061628) ENSCARG00000061617 dcaf11 (ENSCARG00000061334) eloca (ENSCARG00000061240) ube2wb (ENSCARG00000061116) stau2 (ENSCARG00000060169) Cyprininae ANCESTRAL SPECIES 156 ENSGT00940000155285.b.j.a.b.a ENSGT00390000012189.c.b.d ENSGT00390000009802.b.e.a ENSGT00390000011176 ENSGT00960000187176 ENSGT00940000156175.f ENSGT00390000000481.k ENSGT00390000000805.jb ENSGT00390000000626.d ENSGT00940000157001.h ENSGT00940000156177.a ENSGT00940000156398.g ENSGT01100000263537.b.a.a.b.b.f ENSGT00940000156098.a.n ENSGT00510000049635.a.b ENSGT00940000155230.ac #22 ENSGT00940000156220.k.g #23 ENSGT00940000160982.y ENSGT00670000098076.f ENSGT00550000075074.e ENSGT00940000158667.e ENSGT00940000175338 ENSGT01100000263571.i.b.d.b ENSGT00940000155807.a.d ENSGT01100000263571.i.b.c.b ENSGT00390000001912.e.e ENSGT00950000183098.b.a.a.t ENSGT00720000108873.f ENSGT00390000011717.o.a.b ENSGT00940000156908.u.a.a ENSGT00940000154977.p Goldfish MODERN SPECIES 43 tfap2a (ENSCARG00000056156) tmem14ca (ENSCARG00000056123) mak (ENSCARG00000056019) ENSCARG00000056003 POU6F2 (ENSCARG00000055955) vps41 (ENSCARG00000053167) cdv3 (ENSCARG00000053059) ENSCARG00000053053 ENSCARG00000053049 topbp1 (ENSCARG00000052230) uba5 (ENSCARG00000052010) ENSCARG00000051986 ENSCARG00000051982 ENSCARG00000051321 ENSCARG00000051258 tgif1 (ENSCARG00000051238) #22 DLGAP1 (ENSCARG00000050322) #23 pdcd6 (ENSCARG00000050087) nanog (ENSCARG00000050061) tm9sf1 (ENSCARG00000049747) ENSCARG00000049721 fen1 (ENSCARG00000049687) ENSCARG00000049672 ENSCARG00000049666 ENSCARG00000049656 pck2 (ENSCARG00000046290) psme1 (ENSCARG00000045878) dcaf11 (ENSCARG00000045744) eloca (ENSCARG00000045719) ube2wb (ENSCARG00000045670) ENSCARG00000045655 Cyprininae_a ANCESTRAL SPECIES 57 ENSGT00390000015159.b.a.b ENSGT00390000015159.b.a.a.b ENSGT00940000155285.b.j.a.b.b ENSGT00390000012189.c.b.c ENSGT00390000009802.b.e.b ENSGT00940000156175.e.a ENSGT00390000000481.k ENSGT00390000000805.jb ENSGT00390000000626.d ENSGT00940000157001.h ENSGT00940000156177.a ENSGT00940000156398.g ENSGT01100000263537.b.a.a.b.b.f ENSGT00940000156098.a.n ENSGT00510000049635.a.b ENSGT00940000155230.ac #22 ENSGT00940000156220.k.g #23 ENSGT00940000160982.y ENSGT00670000098076.f ENSGT00390000011379.o.b ENSGT00400000023815 ENSGT00550000075074.e ENSGT00940000158667.e ENSGT00940000155807.a.d ENSGT00940000175338 ENSGT01100000263571.i.b.d.b ENSGT01100000263571.i.b.c.b ENSGT00390000001912.e.e ENSGT00950000183098.b.a.a.t ENSGT00720000108873.f ENSGT00940000156908.u.a.a Common carp reference MODERN SPECIES 14 ASAP1 (ENSCCRG00000027846) eef1a1l3 (ENSCCRG00000015970) fam49bb (ENSCCRG00000005112) myca (ENSCCRG00000042352) ankha (ENSCCRG00000042363) ENSCCRG00000015018 ENSCCRG00000065988 vps41 (ENSCCRG00000032583) cdv3 (ENSCCRG00000032561) ENSCCRG00000001043 topbp1 (ENSCCRG00000081139) uba5 (ENSCCRG00000048871) nphp3 (ENSCCRG00000018284) ENSCCRG00000018279 ENSCCRG00000075612 tgif1 (ENSCCRG00000055917) #22 ENSCCRG00000061488 #23 ENSCCRG00000067450 ENSCCRG00000062075 ENSCCRG00000062577 ENSCCRG00000073886 ENSCCRG00000004460 ENSCCRG00000004474 ENSCCRG00000004446 ENSCCRG00000015477 ENSCCRG00000060963 ENSCCRG00000012329 ENSCCRG00000055154 ENSCCRG00000078455 pck2 (ENSCCRG00000005929) psme1 (ENSCCRG00000029799) Golden-line barbel MODERN SPECIES 639 ASAP1 (ENSSGRG00000027454) ENSSGRG00000028755 ENSSGRG00000028756 fam49bb (ENSSGRG00000028796) myca (ENSSGRG00000029817) ankha (ENSSGRG00000029825) ENSSGRG00000030011 vps41 (ENSSGRG00000030031) cdv3 (ENSSGRG00000031030) uba5 (ENSSGRG00000031038) nphp3 (ENSSGRG00000031137) ENSSGRG00000031175 ENSSGRG00000031177 ENSSGRG00000031178 tgif1 (ENSSGRG00000031179) #22 ENSSGRG00000031180 #23 Zebrafish MODERN SPECIES 16 ENSDARG00000092924 zgc:171750 (ENSDARG00000078638) ENSDARG00000093216 zgc:152652 (ENSDARG00000095281) zgc:171977 (ENSDARG00000092885) vps41 (ENSDARG00000063573) cdv3 (ENSDARG00000023028) ENSDARG00000090230 topbp1 (ENSDARG00000059322) uba5 (ENSDARG00000063588) nphp3 (ENSDARG00000078261) ENSDARG00000045427 ENSDARG00000092172 ENSDARG00000059333 ENSDARG00000100872 tgif1 (ENSDARG00000059337) #22 DLGAP1 (ENSDARG00000037415) #23 ENSDARG00000113438 mppe1 (ENSDARG00000045416) gnal (ENSDARG00000045415) ENSDARG00000113258 elovl2 (ENSDARG00000045414) ENSDARG00000116385 gcm2 (ENSDARG00000045413) mak (ENSDARG00000059287) tmem14ca (ENSDARG00000110836) tfap2a (ENSDARG00000059279) slc35b3 (ENSDARG00000045437) EEF1E1 (ENSDARG00000071774) ENSDARG00000104791 bloc1s5 (ENSDARG00000111747) Characiphysae ANCESTRAL SPECIES ENSGT01050000244890.b ENSGT00950000182893.a.a.a.b.c ENSGT00530000063156.b ENSGT00940000164859 ENSGT00390000003308.a.a ENSGT00940000167726 ENSGT00390000015564 ENSGT01030000234629.D ENSGT00940000157975 ENSGT00940000155667.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT00940000160982 ENSGT00390000011379 ENSGT00940000172254 ENSGT00400000023815 ENSGT00550000075074 ENSGT00670000098076 ENSGT00940000158667 ENSGT00940000155807.a ENSGT00940000157762 ENSGT00530000063835.b ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000155450.d Channel catfish MODERN SPECIES c1h8orf59 (ENSIPUG00000001900) fbxo45 (ENSIPUG00000001896) nrros (ENSIPUG00000001893) SH3GLB1 (ENSIPUG00000001877) UBA5 (ENSIPUG00000001827) nphp3 (ENSIPUG00000001756) ENSIPUG00000001737 ENSIPUG00000001728 ENSIPUG00000001705 ENSIPUG00000001648 murc (ENSIPUG00000001639) tmeff1b (ENSIPUG00000001626) ENSIPUG00000001618 ENSIPUG00000001608 otud1 (ENSIPUG00000001599) tgif1 (ENSIPUG00000001576) #22 c1h18orf8 (ENSIPUG00000001533) ENSIPUG00000001500 ENSIPUG00000001477 Riok3 (ENSIPUG00000001406) tmem241 (ENSIPUG00000001378) ENSIPUG00000001361 esco1 (ENSIPUG00000001346) fen1 (ENSIPUG00000001277) tm9sf1 (ENSIPUG00000001255) nanog (ENSIPUG00000001246) ipo4 (ENSIPUG00000001185) si:ch211-196f5.2 (ENSIPUG00000001166) Pdcd6 (ENSIPUG00000001129) ENSIPUG00000001113 ENPP2 (ENSIPUG00000001082) Characiphysae_b ANCESTRAL SPECIES 15 ENSGT01050000244890.b ENSGT00950000182893.a.a.a.b.c ENSGT00530000063156.b ENSGT00940000164859 ENSGT00390000003308.a.a ENSGT00940000167726 ENSGT00390000015564 ENSGT01030000234629.D ENSGT00940000157975 ENSGT00940000155667.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT00940000160982 ENSGT00390000011379 ENSGT00400000023815 ENSGT00550000075074 ENSGT00670000098076 ENSGT00940000158667 ENSGT00940000155807.a ENSGT00940000157762 ENSGT00530000063835.b.f ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000009127 ENSGT00940000155450.d ENSGT00940000164265.C.k Characoidei ANCESTRAL SPECIES 197 ENSGT00390000015564 ENSGT01030000234629.D ENSGT00940000157975 ENSGT00940000155667.b.a ENSGT00940000156177 ENSGT00940000156398 ENSGT01100000263537.b.a.a.b.b ENSGT00940000156098.a ENSGT00510000049635 ENSGT00940000155230 #22 ENSGT00940000156220.k #23 ENSGT00940000160982 ENSGT00390000011379 ENSGT00400000023815 ENSGT00550000075074 ENSGT00670000098076 ENSGT00940000158667 ENSGT00940000155807.a ENSGT00940000157762 ENSGT00530000063835.b.f ENSGT00510000048348 ENSGT00940000157008 ENSGT00390000001263 ENSGT00390000001912.e ENSGT00950000183098.b.a.a Mexicana tetra MODERN SPECIES 25 cebpd (ENSAMXG00000037523) SPIDR (ENSAMXG00000034318) mapre2 (ENSAMXG00000033250) dtna (ENSAMXG00000004333) ENSAMXG00000044115 KLHL14 (ENSAMXG00000043692) abcd4 (ENSAMXG00000004384) OBSCN (ENSAMXG00000004421) ENSAMXG00000039627 ENSAMXG00000035374 ENSAMXG00000006218 pak1ip1 (ENSAMXG00000004470) pck2 (ENSAMXG00000004486) psme1 (ENSAMXG00000039644) ENSAMXG00000030381 tgif1 (ENSAMXG00000038592) #22 DLGAP1 (ENSAMXG00000031066) #23 pdcd6 (ENSAMXG00000038741) rec8b (ENSAMXG00000032839) si:ch211-196f5.2 (ENSAMXG00000015420) IPO4 (ENSAMXG00000037878) nanog (ENSAMXG00000032305) tm9sf1 (ENSAMXG00000015479) fen1 (ENSAMXG00000031183) ENSAMXG00000042280 ENSAMXG00000033652 ENSAMXG00000042745 ENSAMXG00000040775 TMEM241 (ENSAMXG00000036594) riok3 (ENSAMXG00000015617) ENSAMXG00000015654 Red-bellied piranha MODERN SPECIES 264 ENSPNAG00000028372 ENSPNAG00000004315 tgif1 (ENSPNAG00000028174) #22 DLGAP1 (ENSPNAG00000028159) #23 pdcd6 (ENSPNAG00000028086) rec8b (ENSPNAG00000028061) si:ch211-196f5.2 (ENSPNAG00000028006) IPO4 (ENSPNAG00000027964) nanog (ENSPNAG00000027729) tm9sf1 (ENSPNAG00000027691) fen1 (ENSPNAG00000027656) ENSPNAG00000027563 rbbp8 (ENSPNAG00000006272) ENSPNAG00000027525 ENSPNAG00000027502 TMEM241 (ENSPNAG00000027493) riok3 (ENSPNAG00000006213) pak1ip1 (ENSPNAG00000027406) Electric eel MODERN SPECIES 107 zgc:110410 (ENSEEEG00000016047) zhx2a (ENSEEEG00000016044) derl1 (ENSEEEG00000016028) nsmce2 (ENSEEEG00000016022) tomm40 (ENSEEEG00000015984) ca2 (ENSEEEG00000015946) ENSEEEG00000015940 fbxo45 (ENSEEEG00000015938) nrros (ENSEEEG00000015934) sh3glb1a (ENSEEEG00000015926) uba5 (ENSEEEG00000015901) nphp3 (ENSEEEG00000015894) ENSEEEG00000015892 ENSEEEG00000015889 ENSEEEG00000015886 tgif1 (ENSEEEG00000015884) #22 ENSEEEG00000015877 #23 pdcd6 (ENSEEEG00000015864) rec8b (ENSEEEG00000015862) si:ch211-196f5.2 (ENSEEEG00000015860) IPO4 (ENSEEEG00000015671) ENSEEEG00000015658 tm9sf1 (ENSEEEG00000015654) fen1 (ENSEEEG00000015649) ENSEEEG00000015648 Spotted gar DUPLICATION Spotted gar MODERN SPECIES 675 crispld1b (ENSLOCG00000003582) dok6 (ENSLOCG00000003566) cd226 (ENSLOCG00000003554) RTTN (ENSLOCG00000003504) socs6b (ENSLOCG00000017811) cbln2a (ENSLOCG00000003482) zgc:161973 (ENSLOCG00000003459) ENSLOCG00000003442 ENSLOCG00000003406 prtfdc1b (ENSLOCG00000003364) ARHGAP21 (ENSLOCG00000003296) KIAA1217 (ENSLOCG00000003260) OTUD1 (ENSLOCG00000003243) ENSLOCG00000003208 ptf1a (ENSLOCG00000003186) tgif1 (ENSLOCG00000003162) #22 dlgap1a (ENSLOCG00000003107) #23 ZBTB14 (ENSLOCG00000017810) #26 epb41l3b (ENSLOCG00000003075) #27 ENSLOCG00000003043 TMEM200C (ENSLOCG00000003032) L3MBTL4 (ENSLOCG00000003008) ARHGAP28 (ENSLOCG00000002975) #28 lama1 (ENSLOCG00000002854) #30 lrrc30a (ENSLOCG00000002842) PTPRM (ENSLOCG00000002692) #32 rab12 (ENSLOCG00000002680) #33 MTCL1 (ENSLOCG00000002658) #34 acss2l (ENSLOCG00000002610) ndufv2 (ENSLOCG00000002593) ankrd12 (ENSLOCG00000002556) Spotted gar MODERN SPECIES 656 SNTA1 (ENSLOCG00000000786) cbfa2t2 (ENSLOCG00000000816) NECAB3 (ENSLOCG00000000865) itcha (ENSLOCG00000000888) znf341 (ENSLOCG00000000947) pxmp4 (ENSLOCG00000000996) E2F1 (ENSLOCG00000001016) tgm5l (ENSLOCG00000001036) ctnnbl1 (ENSLOCG00000001069) VSTM2L (ENSLOCG00000001095) TTI1 (ENSLOCG00000001130) rprd1b (ENSLOCG00000001144) tgm2b (ENSLOCG00000001167) ENSLOCG00000001193 DLGAP4 (ENSLOCG00000001238) ENSLOCG00000001261 #22 myl9a (ENSLOCG00000001277) LPIN3 (ENSLOCG00000001295) mybl2b (ENSLOCG00000001337) ENSLOCG00000001358 ift52 (ENSLOCG00000001372) sgk2a (ENSLOCG00000001397) L3MBTL1 (ENSLOCG00000001414) ENSLOCG00000001442 EPB41L1 (ENSLOCG00000001454) rpn2 (ENSLOCG00000001480) ENSLOCG00000001496 CDK5RAP1 (ENSLOCG00000001505) ENSLOCG00000001534 PREX1 (ENSLOCG00000001552) kcnq2a (ENSLOCG00000001599) Reedfish DUPLICATION Reedfish MODERN SPECIES 14 afg3l2 (ENSECRG00000003957) ENSECRG00000003943 ENSECRG00000003939 colec12 (ENSECRG00000003932) clul1 (ENSECRG00000007243) tyms (ENSECRG00000007222) enosf1 (ENSECRG00000007183) #7 yes1 (ENSECRG00000007054) #8 adcyap1b (ENSECRG00000007021) #9 METTL4 (ENSECRG00000007005) #12 SMCHD1 (ENSECRG00000006977) #15 EMILIN2 (ENSECRG00000006948) #16 LPIN2 (ENSECRG00000006917) #17 myom1a (ENSECRG00000006894) #19 myl12.1 (ENSECRG00000006872) tgif1 (ENSECRG00000006865) #22 dlgap1a (ENSECRG00000006841) #23 ENSECRG00000006824 ZBTB14 (ENSECRG00000006817) #26 epb41l3a (ENSECRG00000006784) #27 ENSECRG00000006768 ENSECRG00000006761 TMEM200C (ENSECRG00000006756) L3MBTL4 (ENSECRG00000006730) ARHGAP28 (ENSECRG00000006699) #28 lama1 (ENSECRG00000006648) #30 ENSECRG00000006622 PTPRM (ENSECRG00000006573) #32 rab12 (ENSECRG00000006552) #33 MTCL1 (ENSECRG00000006525) #34 ENSECRG00000006510 Reedfish MODERN SPECIES 1 STMN3 (ENSECRG00000010316) GMEB2 (ENSECRG00000011254) HELZ2 (ENSECRG00000011279) pdyn (ENSECRG00000011311) stk35 (ENSECRG00000011324) ada (ENSECRG00000011354) ENSECRG00000011376 ptpn1 (ENSECRG00000011392) ENSECRG00000011410 tgm2b (ENSECRG00000011556) manbal (ENSECRG00000012200) src (ENSECRG00000012226) TTI1 (ENSECRG00000012275) rprd1b (ENSECRG00000012316) DLGAP4 (ENSECRG00000012358) ENSECRG00000012389 #22 myl9a (ENSECRG00000012401) ENSECRG00000012414 ENSECRG00000012430 mybl2b (ENSECRG00000012440) ift52 (ENSECRG00000012465) sgk2a (ENSECRG00000012498) ENSECRG00000012517 ENSECRG00000012528 srsf6a (ENSECRG00000012559) ENSECRG00000012638 rpn2 (ENSECRG00000012737) ENSECRG00000012777 CDK5RAP1 (ENSECRG00000012816) ENSECRG00000012887 ENSECRG00000012980 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1491 DNTTIP1 (ENSCMIG00000015514) ube2c (ENSCMIG00000015518) PLTP (ENSCMIG00000015525) rps21 (ENSCMIG00000015530) CABLES2 (ENSCMIG00000015542) ENSCMIG00000015545 gata5 (ENSCMIG00000015548) SLCO4A1 (ENSCMIG00000015549) NTSR1 (ENSCMIG00000015551) manbal (ENSCMIG00000015559) ENSCMIG00000015562 rpn2 (ENSCMIG00000015623) EMILIN3 (ENSCMIG00000015772) ##16 ENSCMIG00000015795 #17 myl12.1 (ENSCMIG00000015846) ENSCMIG00000015891 #22 ENSCMIG00000015893 DLGAP4 (ENSCMIG00000015900) aar2 (ENSCMIG00000015906) ENSCMIG00000015914 srsf6a (ENSCMIG00000015921) L3MBTL1 (ENSCMIG00000015926) ARHGAP40 (ENSCMIG00000015929) slc32a1 (ENSCMIG00000015933) PTPRT (ENSCMIG00000016102) SOGA1 (ENSCMIG00000016734) ##34 ENSCMIG00000016737 acss2 (ENSCMIG00000016749) ENSCMIG00000016775 mapre1 (ENSCMIG00000016777) dnmt3bb.1 (ENSCMIG00000016780) Elephant shark MODERN SPECIES 1569 ENSCMIG00000016150 abhd3 (ENSCMIG00000016156) colec12 (ENSCMIG00000016164) CLUL1 (ENSCMIG00000016171) ENSCMIG00000016180 tyms (ENSCMIG00000016184) yes1 (ENSCMIG00000016349) #8 adcyap1b (ENSCMIG00000016756) #9 ENSCMIG00000016759 ENSCMIG00000016762 SMCHD1 (ENSCMIG00000016796) #15 EMILIN2 (ENSCMIG00000016901) #16 LPIN2 (ENSCMIG00000016941) #17 myom1a (ENSCMIG00000017075) #19 myl12.2 (ENSCMIG00000017197) #21 tgif1 (ENSCMIG00000017220) #22 DLGAP1 (ENSCMIG00000017224) #23 DLGAP1 (ENSCMIG00000017229) #23 ENSCMIG00000017232 ZBTB14 (ENSCMIG00000017233) #26 EPB41L3 (ENSCMIG00000017305) #27 ENSCMIG00000017428 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155230 #22 Hagfish MODERN SPECIES 54 ENSEBUG00000008816 ENSEBUG00000013281 ENSEBUG00000012726 ENSEBUG00000010630 ENSEBUG00000013708 ENSEBUG00000016078 ENSEBUG00000015647 ENSEBUG00000013363 ENSEBUG00000015084 ENSEBUG00000011596 ENSEBUG00000002422 ENSEBUG00000008959 ENSEBUG00000009992 ENSEBUG00000001302 ENSEBUG00000016055 ENSEBUG00000002347 #22 ENSEBUG00000014123 ENSEBUG00000016541 ENSEBUG00000013628 ENSEBUG00000010193 ENSEBUG00000007947 selenon (ENSEBUG00000001113) ENSEBUG00000013779 ENSEBUG00000005505 ENSEBUG00000005105 txndc5 (ENSEBUG00000014412) ENSEBUG00000011067 ENSEBUG00000014056 ENSEBUG00000002562 ENSEBUG00000008789 ENSEBUG00000006806