Eutheria	ANCESTRAL SPECIES	4	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Boreoeutheria	ANCESTRAL SPECIES	4	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00940000179359	ENSGT00940000166642	ENSGT00390000012340
Euarchontoglires	ANCESTRAL SPECIES	4	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Euarchontoglires_A	ANCESTRAL SPECIES	4	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Glires	ANCESTRAL SPECIES	3	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Rodentia	ANCESTRAL SPECIES	4	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Rodentia_B	ANCESTRAL SPECIES	1	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT01030000235034	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Myomorpha	ANCESTRAL SPECIES		ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT01030000235034	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Muroidea	ANCESTRAL SPECIES		ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT01030000235034	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Murinae	ANCESTRAL SPECIES	6	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Mus	ANCESTRAL SPECIES	2	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Mus_A	ANCESTRAL SPECIES	2	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Mus_B	ANCESTRAL SPECIES	2	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Mus_C	ANCESTRAL SPECIES	3	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00900000143173 #36	ENSGT00390000012296 #37
Steppe mouse	MODERN SPECIES	3302					Taok1 (ENSMSIG00000025939) #11	ENSMSIG00000025930 #12	Abhd15 (ENSMSIG00000025926) #13	Trp53i13 (ENSMSIG00000025913) #14	Git1 (ENSMSIG00000025882) #15	ENSMSIG00000025858 #16	Coro6 (ENSMSIG00000025660) #17	ENSMSIG00000025656 #18	Ssh2 (ENSMSIG00000025588) #19	ENSMSIG00000025570 #20	Efcab5 (ENSMSIG00000025530) #21	Nsrp1 (ENSMSIG00000025473) #22	Slc6a4 (ENSMSIG00000025438) #23	Blmh (ENSMSIG00000025419) #24	Tmigd1 (ENSMSIG00000025382) #25	Cpd (ENSMSIG00000025347) #26	Gosr1 (ENSMSIG00000025334) #27	Trarg1 (ENSMSIG00000025329) #28	Bhlha9 (ENSMSIG00000025324) #29	ENSMSIG00000025320 #30	Abr (ENSMSIG00000024887) #31	Timm22 (ENSMSIG00000024863) #32	Nxn (ENSMSIG00000024846) #33	Mrm3 (ENSMSIG00000024835) #34	Dbil5 (ENSMSIG00000024828) #35	ENSMSIG00000024822 #36	Gemin4 (ENSMSIG00000024775) #37
spretus	MODERN SPECIES	2	Sez6 (MGP_SPRETEiJ_G0017627)	Pipox (MGP_SPRETEiJ_G0017626)	Gm10277 (MGP_SPRETEiJ_G0017625)	Myo18a (MGP_SPRETEiJ_G0017624)	Cryba1 (MGP_SPRETEiJ_G0017623)	Nufip2 (MGP_SPRETEiJ_G0017622)	Taok1 (MGP_SPRETEiJ_G0017621) #11	MGP_SPRETEiJ_G0017620 #12	Abhd15 (MGP_SPRETEiJ_G0017619) #13	Trp53i13 (MGP_SPRETEiJ_G0017618) #14	Git1 (MGP_SPRETEiJ_G0017617) #15	Ankrd13b (MGP_SPRETEiJ_G0017616) #16	Coro6 (MGP_SPRETEiJ_G0017615) #17	Ssh2 (MGP_SPRETEiJ_G0017614) #19	Efcab5 (MGP_SPRETEiJ_G0017613) #21	MGP_SPRETEiJ_G0017612 #22	Slc6a4 (MGP_SPRETEiJ_G0017611) #23	Blmh (MGP_SPRETEiJ_G0017610) #24	Tmigd1 (MGP_SPRETEiJ_G0017609) #25	Cpd (MGP_SPRETEiJ_G0017608) #26	Gosr1 (MGP_SPRETEiJ_G0017607) #27	Trarg1 (MGP_SPRETEiJ_G0017606) #28	Bhlha9 (MGP_SPRETEiJ_G0017605) #29	MGP_SPRETEiJ_G0017604 #31	Timm22 (MGP_SPRETEiJ_G0017603) #32	Nxn (MGP_SPRETEiJ_G0017602) #33	Mrm3 (MGP_SPRETEiJ_G0017601) #34	Dbil5 (MGP_SPRETEiJ_G0017600) #35	Tlcd3a (MGP_SPRETEiJ_G0017598)	Glod4 (MGP_SPRETEiJ_G0017597)	Vps53 (MGP_SPRETEiJ_G0017596)
Mouse	MODERN SPECIES	2	Phf12 (ENSMUSG00000037791)	Sez6 (ENSMUSG00000000632)	Pipox (ENSMUSG00000017453)	Gm10277 (ENSMUSG00000069804)	Myo18a (ENSMUSG00000000631)	Cryba1 (ENSMUSG00000000724)	Nufip2 (ENSMUSG00000037857)	Taok1 (ENSMUSG00000017291) #11	Abhd15 (ENSMUSG00000000686) #13	Trp53i13 (ENSMUSG00000044328) #14	Git1 (ENSMUSG00000011877) #15	Ankrd13b (ENSMUSG00000037907) #16	Coro6 (ENSMUSG00000020836) #17	Ssh2 (ENSMUSG00000037926) #19	Efcab5 (ENSMUSG00000050944) #21	Nsrp1 (ENSMUSG00000037958) #22	Slc6a4 (ENSMUSG00000020838) #23	Blmh (ENSMUSG00000020840) #24	Tmigd1 (ENSMUSG00000020839) #25	Cpd (ENSMUSG00000020841) #26	Gosr1 (ENSMUSG00000010392) #27	Trarg1 (ENSMUSG00000046275) #28	Bhlha9 (ENSMUSG00000044243) #29	Abr (ENSMUSG00000017631) #31	Timm22 (ENSMUSG00000020843) #32	Nxn (ENSMUSG00000020844) #33	Mrm3 (ENSMUSG00000038046) #34	Dbil5 (ENSMUSG00000038057) #35	Gemin4 (ENSMUSG00000049396) #37	Tlcd3a (ENSMUSG00000069808)	Glod4 (ENSMUSG00000017286)
Ryukyu mouse	MODERN SPECIES	2	Sez6 (MGP_CAROLIEiJ_G0016784)	Pipox (MGP_CAROLIEiJ_G0016783)	Gm10277 (MGP_CAROLIEiJ_G0016782)	Myo18a (MGP_CAROLIEiJ_G0016781)	Cryba1 (MGP_CAROLIEiJ_G0016780)	Nufip2 (MGP_CAROLIEiJ_G0016779)	Taok1 (MGP_CAROLIEiJ_G0016778) #11	MGP_CAROLIEiJ_G0016777 #12	Abhd15 (MGP_CAROLIEiJ_G0016776) #13	Trp53i13 (MGP_CAROLIEiJ_G0016775) #14	Git1 (MGP_CAROLIEiJ_G0016774) #15	Ankrd13b (MGP_CAROLIEiJ_G0016773) #16	Coro6 (MGP_CAROLIEiJ_G0016772) #17	Ssh2 (MGP_CAROLIEiJ_G0016771) #19	Efcab5 (MGP_CAROLIEiJ_G0016770) #21	Nsrp1 (MGP_CAROLIEiJ_G0016769) #22	Slc6a4 (MGP_CAROLIEiJ_G0016768) #23	Blmh (MGP_CAROLIEiJ_G0016767) #24	Tmigd1 (MGP_CAROLIEiJ_G0016766) #25	Cpd (MGP_CAROLIEiJ_G0016765) #26	Gosr1 (MGP_CAROLIEiJ_G0016764) #27	Trarg1 (MGP_CAROLIEiJ_G0016763) #28	Bhlha9 (MGP_CAROLIEiJ_G0016762) #29	MGP_CAROLIEiJ_G0016761 #31	Timm22 (MGP_CAROLIEiJ_G0016760) #32	Nxn (MGP_CAROLIEiJ_G0016759) #33	Mrm3 (MGP_CAROLIEiJ_G0016758) #34	Dbil5 (MGP_CAROLIEiJ_G0016757) #35	Gemin4 (MGP_CAROLIEiJ_G0016756) #37	Tlcd3a (MGP_CAROLIEiJ_G0016755)	Glod4 (MGP_CAROLIEiJ_G0016754)
Shrew mouse	MODERN SPECIES	5	Sez6 (MGP_PahariEiJ_G0017921)	Pipox (MGP_PahariEiJ_G0017920)	MGP_PahariEiJ_G0017919	Myo18a (MGP_PahariEiJ_G0017918)	Cryba1 (MGP_PahariEiJ_G0017917)	Nufip2 (MGP_PahariEiJ_G0017916)	Taok1 (MGP_PahariEiJ_G0017915) #11	MGP_PahariEiJ_G0017914 #12	Abhd15 (MGP_PahariEiJ_G0017913) #13	Trp53i13 (MGP_PahariEiJ_G0017912) #14	Git1 (MGP_PahariEiJ_G0017911) #15	MGP_PahariEiJ_G0017910 #16	Coro6 (MGP_PahariEiJ_G0017909) #17	Ssh2 (MGP_PahariEiJ_G0017908) #19	Efcab5 (MGP_PahariEiJ_G0017907) #21	Nsrp1 (MGP_PahariEiJ_G0017906) #22	MGP_PahariEiJ_G0017905 #23	Blmh (MGP_PahariEiJ_G0017904) #24	Tmigd1 (MGP_PahariEiJ_G0017903) #25	Cpd (MGP_PahariEiJ_G0017902) #26	Gosr1 (MGP_PahariEiJ_G0017901) #27	Trarg1 (MGP_PahariEiJ_G0017900) #28	Bhlha9 (MGP_PahariEiJ_G0017899) #29	MGP_PahariEiJ_G0017898 #31	Timm22 (MGP_PahariEiJ_G0017897) #32	Nxn (MGP_PahariEiJ_G0017896) #33	Mrm3 (MGP_PahariEiJ_G0017895) #34	Dbil5 (MGP_PahariEiJ_G0017894) #35	Gemin4 (MGP_PahariEiJ_G0017893) #37	Tlcd3a (MGP_PahariEiJ_G0017892)	Glod4 (MGP_PahariEiJ_G0017891)
Rat	MODERN SPECIES	1	Pipox (ENSRNOG00000008798)	Myo18a (ENSRNOG00000033101)	Cryba1 (ENSRNOG00000008700)	Nufip2 (ENSRNOG00000024964)	ENSRNOG00000069823	ENSRNOG00000063840	Taok1 (ENSRNOG00000015692) #11	Abhd15 (ENSRNOG00000015002) #13	Tp53i13 (ENSRNOG00000022615) #14	Git1 (ENSRNOG00000061270) #15	Ankrd13b (ENSRNOG00000014742) #16	Coro6 (ENSRNOG00000014496) #17	AABR07030019.1 (ENSRNOG00000050113)	Ssh2 (ENSRNOG00000014285) #19	Efcab5 (ENSRNOG00000022536) #21	Nsrp1 (ENSRNOG00000062400) #22	Slc6a4 (ENSRNOG00000003476) #23	Blmh (ENSRNOG00000003563) #24	Tmigd1 (ENSRNOG00000003865) #25	Cpd (ENSRNOG00000003873) #26	Trarg1 (ENSRNOG00000022239) #28	Bhlha9 (ENSRNOG00000022232) #29	Gosr1 (ENSRNOG00000070896) #27	Gosr1 (ENSRNOG00000070572) #27	Gosr1 (ENSRNOG00000003971) #27	Abr (ENSRNOG00000056837) #31	Timm22 (ENSRNOG00000007988) #32	Nxn (ENSRNOG00000008178) #33	Mrm3 (ENSRNOG00000037238) #34	Gemin4 (ENSRNOG00000055236) #36	Gemin4 (ENSRNOG00000007788) #37
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00860000136362	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36	ENSGT01010000222313.A.b.b.b
Golden Hamster	MODERN SPECIES	627															Efcab5 (ENSMAUG00000019112) #21	ENSMAUG00000017652 #22	Slc6a4 (ENSMAUG00000012677) #23	Blmh (ENSMAUG00000015867) #24	ENSMAUG00000021264	Cpd (ENSMAUG00000018702) #26	Gosr1 (ENSMAUG00000014407) #27	Trarg1 (ENSMAUG00000003421) #28	Bhlha9 (ENSMAUG00000009821) #29	Abr (ENSMAUG00000021698) #31	Nxn (ENSMAUG00000002800) #33	Mrm3 (ENSMAUG00000018823) #34	Gemin4 (ENSMAUG00000018640) #37	Dbil5 (ENSMAUG00000009815) #35	ENSMAUG00000007743 #36	Tlcd3a (ENSMAUG00000018028)	Vps53 (ENSMAUG00000014153)
Chinese hamster chok1gshd	MODERN SPECIES	326							Taok1 (ENSCGRG00001010192) #11	Abhd15 (ENSCGRG00001013381) #13	Trp53i13 (ENSCGRG00001015433) #14	ENSCGRG00001013750	Git1 (ENSCGRG00001018873) #15	Ankrd13b (ENSCGRG00001006026) #16	Coro6 (ENSCGRG00001003233) #17	Ssh2 (ENSCGRG00001017782) #19	Efcab5 (ENSCGRG00001013684) #21	Nsrp1 (ENSCGRG00001017048) #22	Slc6a4 (ENSCGRG00001019660) #23	Blmh (ENSCGRG00001012233) #24	Tmigd1 (ENSCGRG00001016242) #25	Cpd (ENSCGRG00001017567) #26	GOSR1 (ENSCGRG00001014609) #27	Trarg1 (ENSCGRG00001017116) #28	Bhlha9 (ENSCGRG00001013518) #29	Abr (ENSCGRG00001012999) #31	Timm22 (ENSCGRG00001011484) #32	Nxn (ENSCGRG00001014576) #33	Mrm3 (ENSCGRG00001014632) #34	Gemin4 (ENSCGRG00001016874) #37	Dbil5 (ENSCGRG00001014563) #35	ENSCGRG00001005416 #36	Tlcd3a (ENSCGRG00001006396)
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Prairie vole	MODERN SPECIES	15	Myo18a (ENSMOCG00000022942)	ENSMOCG00000002378	Cryba1 (ENSMOCG00000009961)	Nufip2 (ENSMOCG00000022086)	Taok1 (ENSMOCG00000007289) #11	ENSMOCG00000002833	Abhd15 (ENSMOCG00000020292) #13	ENSMOCG00000012497 #12	Trp53i13 (ENSMOCG00000006130) #14	Git1 (ENSMOCG00000011144) #15	Ankrd13b (ENSMOCG00000008806) #16	Coro6 (ENSMOCG00000013111) #17	ENSMOCG00000006899 #19	Efcab5 (ENSMOCG00000006093) #21	ENSMOCG00000016597	Nsrp1 (ENSMOCG00000019716) #22	Slc6a4 (ENSMOCG00000004407) #23	Blmh (ENSMOCG00000007175) #24	ENSMOCG00000008686	Cpd (ENSMOCG00000011977) #26	Gosr1 (ENSMOCG00000011008) #27	Trarg1 (ENSMOCG00000020924) #28	Bhlha9 (ENSMOCG00000002327) #29	ENSMOCG00000004581	Abr (ENSMOCG00000017665) #31	Timm22 (ENSMOCG00000021862) #32	Nxn (ENSMOCG00000014329) #33	Mrm3 (ENSMOCG00000018749) #34	Gemin4 (ENSMOCG00000016454) #37	Dbil5 (ENSMOCG00000004108) #35	ENSMOCG00000006304 #36
Northern American deer mouse	MODERN SPECIES	21	Dhrs13 (ENSPEMG00000018563)	Phf12 (ENSPEMG00000024226)	Sez6 (ENSPEMG00000015854)	Pipox (ENSPEMG00000006675)	Myo18a (ENSPEMG00000018428)	ENSPEMG00000025729	Cryba1 (ENSPEMG00000021356)	Nufip2 (ENSPEMG00000011656)	Taok1 (ENSPEMG00000017133) #11	Abhd15 (ENSPEMG00000022483) #13	Trp53i13 (ENSPEMG00000021767) #14	Git1 (ENSPEMG00000021628) #15	Ankrd13b (ENSPEMG00000009734) #16	Coro6 (ENSPEMG00000021812) #17	Ssh2 (ENSPEMG00000021409) #19	Nsrp1 (ENSPEMG00000021659) #22	Slc6a4 (ENSPEMG00000009592) #23	Blmh (ENSPEMG00000023010) #24	Tmigd1 (ENSPEMG00000024232) #25	Cpd (ENSPEMG00000021876) #26	Gosr1 (ENSPEMG00000022748) #27	Trarg1 (ENSPEMG00000028737) #28	Bhlha9 (ENSPEMG00000003963) #29	Abr (ENSPEMG00000010388) #31	Timm22 (ENSPEMG00000015282) #32	Nxn (ENSPEMG00000012023) #33	Mrm3 (ENSPEMG00000022505) #34	Dbil5 (ENSPEMG00000022249) #35	Glod4 (ENSPEMG00000023233)	Tlcd3a (ENSPEMG00000022199)	Vps53 (ENSPEMG00000023081)
Upper Galilee mountains blind mole rat	MODERN SPECIES	618	Sez6 (ENSNGAG00000017680)	Pipox (ENSNGAG00000016851)	Myo18a (ENSNGAG00000020433)	Cryba1 (ENSNGAG00000013276)	ENSNGAG00000016940	Taok1 (ENSNGAG00000010032) #11	Abhd15 (ENSNGAG00000015915) #13	ENSNGAG00000005342	Trp53i13 (ENSNGAG00000013861) #14	Git1 (ENSNGAG00000017763) #15	Ankrd13b (ENSNGAG00000011897) #16	Coro6 (ENSNGAG00000004289) #17	Ssh2 (ENSNGAG00000015423) #19	Efcab5 (ENSNGAG00000013416) #21	ENSNGAG00000011980	ENSNGAG00000000819 #22	Slc6a4 (ENSNGAG00000002598) #23	Blmh (ENSNGAG00000014351) #24	Tmigd1 (ENSNGAG00000020532) #25	Cpd (ENSNGAG00000007840) #26	Gosr1 (ENSNGAG00000014273) #27	Trarg1 (ENSNGAG00000020827) #28	ENSNGAG00000017794	ENSNGAG00000012129	Abr (ENSNGAG00000012224) #31	Timm22 (ENSNGAG00000014617) #32	ENSNGAG00000016301	Mrm3 (ENSNGAG00000011304) #34	Glod4 (ENSNGAG00000014656)	Dbil5 (ENSNGAG00000015983) #35	Gemin4 (ENSNGAG00000016650) #37
Lesser Egyptian jerboa	MODERN SPECIES	146									Taok1 (ENSJJAG00000016304) #11	Abhd15 (ENSJJAG00000009633) #13	Git1 (ENSJJAG00000014479) #15	Ankrd13b (ENSJJAG00000012567) #16	Coro6 (ENSJJAG00000000140) #17	Ssh2 (ENSJJAG00000019804) #19	ENSJJAG00000018287	Nsrp1 (ENSJJAG00000011862) #22	Slc6a4 (ENSJJAG00000010429) #23	ENSJJAG00000007506 #24	ENSJJAG00000004461	Cpd (ENSJJAG00000003090) #26	Gosr1 (ENSJJAG00000019846) #27	ENSJJAG00000014451	Abr (ENSJJAG00000011678) #31	Timm22 (ENSJJAG00000002487) #32	ENSJJAG00000023790	Mrm3 (ENSJJAG00000024189) #34	Glod4 (ENSJJAG00000023891)	Dbil5 (ENSJJAG00000014114) #35	Gemin4 (ENSJJAG00000014157) #37	ENSJJAG00000014101	Vps53 (ENSJJAG00000017718)
Kangaroo rat	MODERN SPECIES	350	Dhrs13 (ENSDORG00000023282)	Phf12 (ENSDORG00000001218)	Sez6 (ENSDORG00000001220)	Pipox (ENSDORG00000001222)	Myo18a (ENSDORG00000001223)	Cryba1 (ENSDORG00000001761)	Nufip2 (ENSDORG00000023937)	Taok1 (ENSDORG00000004693) #11	Abhd15 (ENSDORG00000004696) #13	Trp53i13 (ENSDORG00000004697) #14	Git1 (ENSDORG00000004699) #15	Ankrd13b (ENSDORG00000014439) #16	Coro6 (ENSDORG00000014442) #17	ENSDORG00000029058 #19	Efcab5 (ENSDORG00000016637) #21	Nsrp1 (ENSDORG00000010440) #22	Slc6a4 (ENSDORG00000008205) #23	Blmh (ENSDORG00000008206) #24	Tmigd1 (ENSDORG00000006574) #25	Cpd (ENSDORG00000002007) #26	Gosr1 (ENSDORG00000025084) #27	ENSDORG00000002800	Trarg1 (ENSDORG00000011333) #28	Bhlha9 (ENSDORG00000026823) #29	Abr (ENSDORG00000013627) #31	Timm22 (ENSDORG00000023201) #32	ENSDORG00000007556	Mrm3 (ENSDORG00000007555) #34	Gemin4 (ENSDORG00000007547) #37	Dbil5 (ENSDORG00000024622) #35	ENSDORG00000026359 #36
Rodentia_A	ANCESTRAL SPECIES	3	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Sciuridae	ANCESTRAL SPECIES	4	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Marmotini	ANCESTRAL SPECIES	39	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Marmotini_b	ANCESTRAL SPECIES	34	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Arctic ground squirrel	MODERN SPECIES	63	PHF12 (ENSUPAG00010022185)	SEZ6 (ENSUPAG00010022178)	PIPOX (ENSUPAG00010022176)	MYO18A (ENSUPAG00010019204)	CRYBA1 (ENSUPAG00010019144)	NUFIP2 (ENSUPAG00010019130)	ENSUPAG00010019122	TAOK1 (ENSUPAG00010019077) #11	ENSUPAG00010019071 #12	ABHD15 (ENSUPAG00010019069) #13	TP53I13 (ENSUPAG00010019061) #14	GIT1 (ENSUPAG00010019001) #15	ANKRD13B (ENSUPAG00010018979) #16	CORO6 (ENSUPAG00010018909) #17	SSH2 (ENSUPAG00010018854) #19	NSRP1 (ENSUPAG00010018820) #22	SLC6A4 (ENSUPAG00010018800) #23	BLMH (ENSUPAG00010018791) #24	TMIGD1 (ENSUPAG00010018786) #25	CPD (ENSUPAG00010018772) #26	GOSR1 (ENSUPAG00010018759) #27	TRARG1 (ENSUPAG00010018751) #28	BHLHA9 (ENSUPAG00010018747) #29	ABR (ENSUPAG00010018633) #31	TIMM22 (ENSUPAG00010018629) #32	NXN (ENSUPAG00010018610) #33	MRM3 (ENSUPAG00010018599) #34	GLOD4 (ENSUPAG00010018542)	ENSUPAG00010018538 #35	GEMIN4 (ENSUPAG00010018533) #37	TLCD3A (ENSUPAG00010018510)
Squirrel	MODERN SPECIES	138	PHF12 (ENSSTOG00000003505)	SEZ6 (ENSSTOG00000029011)	PIPOX (ENSSTOG00000003537)	MYO18A (ENSSTOG00000003560)	CRYBA1 (ENSSTOG00000003669)	ENSSTOG00000003701	TAOK1 (ENSSTOG00000014276) #11	ENSSTOG00000027430	ABHD15 (ENSSTOG00000024147) #13	TP53I13 (ENSSTOG00000014288) #14	GIT1 (ENSSTOG00000014292) #15	ANKRD13B (ENSSTOG00000014311) #16	CORO6 (ENSSTOG00000014320) #17	SSH2 (ENSSTOG00000023134) #19	ENSSTOG00000012528 #21	NSRP1 (ENSSTOG00000028001) #22	SLC6A4 (ENSSTOG00000004183) #23	BLMH (ENSSTOG00000004203) #24	TMIGD1 (ENSSTOG00000004227) #25	CPD (ENSSTOG00000004241) #26	ENSSTOG00000034897	GOSR1 (ENSSTOG00000024599) #27	TRARG1 (ENSSTOG00000029150) #28	ABR (ENSSTOG00000016430) #31	TIMM22 (ENSSTOG00000025948) #32	ENSSTOG00000016427	MRM3 (ENSSTOG00000016426) #34	GEMIN4 (ENSSTOG00000027263) #37	ENSSTOG00000022725 #35	TLCD3A (ENSSTOG00000016422)	VPS53 (ENSSTOG00000016418)
Alpin marmot	MODERN SPECIES	71	SEZ6 (ENSMMMG00000011696)	PIPOX (ENSMMMG00000011690)	MYO18A (ENSMMMG00000003556)	CRYBA1 (ENSMMMG00000003394)	NUFIP2 (ENSMMMG00000003388)	TAOK1 (ENSMMMG00000003322) #11	ENSMMMG00000003292 #12	ABHD15 (ENSMMMG00000003268) #13	TP53I13 (ENSMMMG00000003247) #14	GIT1 (ENSMMMG00000003150) #15	ANKRD13B (ENSMMMG00000003110) #16	CORO6 (ENSMMMG00000002928) #17	ENSMMMG00000002913	SSH2 (ENSMMMG00000002835) #19	EFCAB5 (ENSMMMG00000002782) #21	NSRP1 (ENSMMMG00000002762) #22	SLC6A4 (ENSMMMG00000002724) #23	BLMH (ENSMMMG00000002681) #24	TMIGD1 (ENSMMMG00000002644) #25	CPD (ENSMMMG00000002237) #26	GOSR1 (ENSMMMG00000002214) #27	TRARG1 (ENSMMMG00000002207) #28	ABR (ENSMMMG00000024147) #31	TIMM22 (ENSMMMG00000024146) #32	NXN (ENSMMMG00000024144) #33	MRM3 (ENSMMMG00000024143) #34	ENSMMMG00000024142 #35	GEMIN4 (ENSMMMG00000024141) #37	TLCD3A (ENSMMMG00000024140)	VPS53 (ENSMMMG00000024137)	ENSMMMG00000024136
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	12	ENSSVLG00005020195	SEZ6 (ENSSVLG00005019709)	PIPOX (ENSSVLG00005019443)	MYO18A (ENSSVLG00005017864)	CRYBA1 (ENSSVLG00005017579)	NUFIP2 (ENSSVLG00005017447)	TAOK1 (ENSSVLG00005017003) #11	ABHD15 (ENSSVLG00005016931) #13	TP53I13 (ENSSVLG00005016913) #14	ENSSVLG00005016187 #15	ANKRD13B (ENSSVLG00005016071) #16	CORO6 (ENSSVLG00005016004) #17	SSH2 (ENSSVLG00005015557) #19	ENSSVLG00005015512	EFCAB5 (ENSSVLG00005015329) #21	ENSSVLG00005015150 #22	SLC6A4 (ENSSVLG00005014995) #23	BLMH (ENSSVLG00005014943) #24	TMIGD1 (ENSSVLG00005014819) #25	CPD (ENSSVLG00005014559) #26	GOSR1 (ENSSVLG00005014451) #27	TRARG1 (ENSSVLG00005014386) #28	BHLHA9 (ENSSVLG00005014374) #29	ABR (ENSSVLG00005014239) #31	TIMM22 (ENSSVLG00005014132) #32	ENSSVLG00005014112	ENSSVLG00005014075	NXN (ENSSVLG00005013956) #33	MRM3 (ENSSVLG00005013823) #34	GLOD4 (ENSSVLG00005013759)	ENSSVLG00005013645 #35
Eurasian red squirrel	MODERN SPECIES	11	FNTB (ENSSVLG00005016171)	RAB15 (ENSSVLG00005000106)	GPX2 (ENSSVLG00005000324)	CHURC1 (ENSSVLG00005000339)	SPTB (ENSSVLG00005000402)	PLEKHG3 (ENSSVLG00005000506)	PPP1R36 (ENSSVLG00005000570)	HSPA2 (ENSSVLG00005000590)	ZBTB1 (ENSSVLG00005000601)	ZBTB25 (ENSSVLG00005000623)	AKAP5 (ENSSVLG00005000634)	MTHFD1 (ENSSVLG00005000661)	ENSSVLG00005000739	ESR2 (ENSSVLG00005000779)	SYNE2 (ENSSVLG00005000961)	ENSSVLG00005001210 #22	ENSSVLG00005001225	ENSSVLG00005001240	SGPP1 (ENSSVLG00005001258)	WDR89 (ENSSVLG00005001301)	PPP2R5E (ENSSVLG00005001322)	GPHB5 (ENSSVLG00005001358)	RHOJ (ENSSVLG00005001376)	KCNH5 (ENSSVLG00005001424)	ENSSVLG00005001474	SYT16 (ENSSVLG00005001481)	SNAPC1 (ENSSVLG00005001506)	HIF1A (ENSSVLG00005001642)	PRKCH (ENSSVLG00005001876)	TMEM30B (ENSSVLG00005001934)	SLC38A6 (ENSSVLG00005001956)
Hystricomorpha	ANCESTRAL SPECIES	3	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Hystricomorpha_a	ANCESTRAL SPECIES		ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Hystricomorpha_b	ANCESTRAL SPECIES		ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Long-tailed chinchilla	MODERN SPECIES	188	SEZ6 (ENSCLAG00000007089)	PIPOX (ENSCLAG00000006253)	MYO18A (ENSCLAG00000009674)	CRYBA1 (ENSCLAG00000010128)	NUFIP2 (ENSCLAG00000007711)	ENSCLAG00000009994	TAOK1 (ENSCLAG00000005510) #11	ENSCLAG00000006911	ABHD15 (ENSCLAG00000006673) #13	TP53I13 (ENSCLAG00000006219) #14	GIT1 (ENSCLAG00000005307) #15	ANKRD13B (ENSCLAG00000006356) #16	CORO6 (ENSCLAG00000009309) #17	SSH2 (ENSCLAG00000004951) #19	EFCAB5 (ENSCLAG00000006698) #21	NSRP1 (ENSCLAG00000005413) #22	SLC6A4 (ENSCLAG00000009083) #23	BLMH (ENSCLAG00000004413) #24	TMIGD1 (ENSCLAG00000005023) #25	CPD (ENSCLAG00000008233) #26	GOSR1 (ENSCLAG00000010994) #27	TRARG1 (ENSCLAG00000011922) #28	BHLHA9 (ENSCLAG00000009813) #29	ABR (ENSCLAG00000005717) #31	TIMM22 (ENSCLAG00000012842) #32	NXN (ENSCLAG00000009995) #33	MRM3 (ENSCLAG00000008589) #34	ENSCLAG00000007298 #35	GEMIN4 (ENSCLAG00000008139) #37	TLCD3A (ENSCLAG00000007548)	VPS53 (ENSCLAG00000010632)
Degu	MODERN SPECIES	113	SEZ6 (ENSODEG00000010908)	PIPOX (ENSODEG00000009951)	MYO18A (ENSODEG00000010447)	CRYBA1 (ENSODEG00000009503)	NUFIP2 (ENSODEG00000009679)	TAOK1 (ENSODEG00000010217) #11	ABHD15 (ENSODEG00000010919) #13	TP53I13 (ENSODEG00000012662) #14	GIT1 (ENSODEG00000009604) #15	ANKRD13B (ENSODEG00000009365) #16	CORO6 (ENSODEG00000009805) #17	ENSODEG00000019652	ENSODEG00000009040	SSH2 (ENSODEG00000009157) #19	EFCAB5 (ENSODEG00000010381) #21	NSRP1 (ENSODEG00000009225) #22	ENSODEG00000019721	SLC6A4 (ENSODEG00000008634) #23	BLMH (ENSODEG00000009638) #24	TMIGD1 (ENSODEG00000009572) #25	ENSODEG00000008916	ENSODEG00000019521	ENSODEG00000008756 #26	ENSODEG00000008935	ENSODEG00000010596 #27	TRARG1 (ENSODEG00000009480) #28	ENSODEG00000009619	ABR (ENSODEG00000009247) #31	TIMM22 (ENSODEG00000010287) #32	NXN (ENSODEG00000009835) #33	MRM3 (ENSODEG00000009411) #34
Guinea pig	MODERN SPECIES	32	FLOT2 (ENSCPOG00000015300)	DHRS13 (ENSCPOG00000007466)	PHF12 (ENSCPOG00000007469)	SEZ6 (ENSCPOG00000007483)	PIPOX (ENSCPOG00000007498)	MYO18A (ENSCPOG00000007502)	CRYBA1 (ENSCPOG00000002812)	NUFIP2 (ENSCPOG00000002815)	TAOK1 (ENSCPOG00000012148) #11	ABHD15 (ENSCPOG00000023086) #13	TP53I13 (ENSCPOG00000005706) #14	GIT1 (ENSCPOG00000005710) #15	ANKRD13B (ENSCPOG00000005716) #16	CORO6 (ENSCPOG00000002047) #17	SSH2 (ENSCPOG00000005726) #19	NSRP1 (ENSCPOG00000031448) #22	SLC6A4 (ENSCPOG00000010596) #23	BLMH (ENSCPOG00000005048) #24	TMIGD1 (ENSCPOG00000005049) #25	CPD (ENSCPOG00000002175) #26	GOSR1 (ENSCPOG00000003814) #27	TRARG1 (ENSCPOG00000025177) #28	BHLHA9 (ENSCPOG00000001935) #29	ABR (ENSCPOG00000005227) #31	TIMM22 (ENSCPOG00000033413) #32	NXN (ENSCPOG00000003199) #33	MRM3 (ENSCPOG00000026540) #34	ENSCPOG00000019350 #35	GEMIN4 (ENSCPOG00000004307) #37	TLCD3A (ENSCPOG00000004305)	VPS53 (ENSCPOG00000009355)
Naked mole-rat female	MODERN SPECIES	12	PIPOX (ENSHGLG00000010288)	SEZ6 (ENSHGLG00000011159)	MYO18A (ENSHGLG00000014462)	CRYBA1 (ENSHGLG00000010257)	NUFIP2 (ENSHGLG00000006811)	ENSHGLG00000007465	TAOK1 (ENSHGLG00000009506) #11	ABHD15 (ENSHGLG00000013213) #13	TP53I13 (ENSHGLG00000006065) #14	GIT1 (ENSHGLG00000006956) #15	ANKRD13B (ENSHGLG00000008230) #16	CORO6 (ENSHGLG00000010527) #17	SSH2 (ENSHGLG00000014658) #19	ENSHGLG00000037571 #21	ENSHGLG00000040530 #21	NSRP1 (ENSHGLG00000034319) #22	SLC6A4 (ENSHGLG00000016732) #23	BLMH (ENSHGLG00000040851) #24	TMIGD1 (ENSHGLG00000011492) #25	CPD (ENSHGLG00000013788) #26	ENSHGLG00000017424 #27	ENSHGLG00000018479 #28	ABR (ENSHGLG00000010021) #31	TIMM22 (ENSHGLG00000006834) #32	NXN (ENSHGLG00000035420) #33	MRM3 (ENSHGLG00000009544) #34	GLOD4 (ENSHGLG00000033335)	ENSHGLG00000034044 #35	GEMIN4 (ENSHGLG00000013238) #37	ENSHGLG00000048915 #36	TLCD3A (ENSHGLG00000010658)
Lagomorpha	ANCESTRAL SPECIES		ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00940000164902	ENSGT00390000012340	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Rabbit	MODERN SPECIES	10	PHF12 (ENSOCUG00000015224)	SEZ6 (ENSOCUG00000015254)	PIPOX (ENSOCUG00000015278)	MYO18A (ENSOCUG00000015290)	CRYBA1 (ENSOCUG00000012276)	NUFIP2 (ENSOCUG00000016483)	TAOK1 (ENSOCUG00000015730) #11	ENSOCUG00000032737	ABHD15 (ENSOCUG00000023770) #13	TP53I13 (ENSOCUG00000012681) #14	GIT1 (ENSOCUG00000016586) #15	ANKRD13B (ENSOCUG00000012687) #16	CORO6 (ENSOCUG00000012700) #17	SSH2 (ENSOCUG00000016601) #19	EFCAB5 (ENSOCUG00000025537) #21	NSRP1 (ENSOCUG00000000155) #22	SLC6A4 (ENSOCUG00000003640) #23	BLMH (ENSOCUG00000003644) #24	TMIGD1 (ENSOCUG00000003649) #25	CPD (ENSOCUG00000010505) #26	GOSR1 (ENSOCUG00000001777) #27	TRARG1 (ENSOCUG00000022938) #28	BHLHA9 (ENSOCUG00000001780) #29	ABR (ENSOCUG00000005197) #31	TIMM22 (ENSOCUG00000008033) #32	MRM3 (ENSOCUG00000002219) #34	ENSOCUG00000033243	ENSOCUG00000005189	ENSOCUG00000002208 #35	GEMIN4 (ENSOCUG00000002205) #37	TLCD3A (ENSOCUG00000002202)
Pika	MODERN SPECIES	2614								TAOK1 (ENSOPRG00000007682) #11	ABHD15 (ENSOPRG00000007721) #13	TP53I13 (ENSOPRG00000007727) #14	GIT1 (ENSOPRG00000007741) #15	ANKRD13B (ENSOPRG00000007767) #16	CORO6 (ENSOPRG00000007793) #17	SSH2 (ENSOPRG00000007813) #19	ENSOPRG00000007842 #21	NSRP1 (ENSOPRG00000007870) #22	SLC6A4 (ENSOPRG00000007894) #23	BLMH (ENSOPRG00000007918) #24	TMIGD1 (ENSOPRG00000007945) #25	ENSOPRG00000007957 #26
Tree shrew	DUPLICATION
Tree shrew	MODERN SPECIES	7852																ENSTBEG00000015074 #22
Tree shrew	MODERN SPECIES	4106															ENSTBEG00000008220 #21	ENSTBEG00000003664 #22	SLC6A4 (ENSTBEG00000004370) #23	BLMH (ENSTBEG00000005398) #24	TMIGD1 (ENSTBEG00000006198) #25
Primates	ANCESTRAL SPECIES	3	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Haplorrhini	ANCESTRAL SPECIES	6	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Simiiformes	ANCESTRAL SPECIES	7	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT01000000215472	ENSGT00390000007384	ENSGT00390000016493.b.b	ENSGT00390000012364
Catarrhini	ANCESTRAL SPECIES	8	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT01000000215472	ENSGT00390000007384	ENSGT00390000016493.b.b	ENSGT00390000012364
Hominoidea	ANCESTRAL SPECIES	27	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384.c.a	ENSGT00390000016493.b.b	ENSGT00390000012364	ENSGT00940000153469.a.b	ENSGT00940000153469.a.a
Hominidae	ANCESTRAL SPECIES	20	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b.c	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00530000063282.t.i	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384.d	ENSGT00390000016493.b.b	ENSGT00390000012364	ENSGT00940000153469.a.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	1	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00530000063282.t.i	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384.d	ENSGT00390000016493.b.b	ENSGT00390000012364	ENSGT00940000153469.a.b.g.a
Gorilla	MODERN SPECIES	18	PHF12 (ENSGGOG00000012335)	SEZ6 (ENSGGOG00000012350)	PIPOX (ENSGGOG00000012368)	MYO18A (ENSGGOG00000012380)	CRYBA1 (ENSGGOG00000002292)	NUFIP2 (ENSGGOG00000008590)	TAOK1 (ENSGGOG00000007094) #11	ABHD15 (ENSGGOG00000012447) #13	TP53I13 (ENSGGOG00000016997) #14	GIT1 (ENSGGOG00000017001) #15	ANKRD13B (ENSGGOG00000000577) #16	CORO6 (ENSGGOG00000000581) #17	SSH2 (ENSGGOG00000000583) #19	ENSGGOG00000028443	EFCAB5 (ENSGGOG00000010694) #21	NSRP1 (ENSGGOG00000009216) #22	SLC6A4 (ENSGGOG00000011934) #23	BLMH (ENSGGOG00000005500) #24	TMIGD1 (ENSGGOG00000008620) #25	CPD (ENSGGOG00000041775) #26	GOSR1 (ENSGGOG00000011772) #27	ENSGGOG00000025464	ENSGGOG00000036811	ENSGGOG00000040430	ENSGGOG00000037927	CRLF3 (ENSGGOG00000005002)	ATAD5 (ENSGGOG00000005883)	TEFM (ENSGGOG00000025274)	ADAP2 (ENSGGOG00000004257)	RNF135 (ENSGGOG00000005912)	ENSGGOG00000021959
Homo/Pan group	ANCESTRAL SPECIES	2	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00530000063282.t.i	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384.c.a	ENSGT00390000016493.b.b	ENSGT00390000012364	ENSGT00940000153469.a.b.g.a
Human	MODERN SPECIES	8	DHRS13 (ENSG00000167536)	PHF12 (ENSG00000109118)	PIPOX (ENSG00000179761)	SEZ6 (ENSG00000063015)	MYO18A (ENSG00000196535)	CRYBA1 (ENSG00000108255)	NUFIP2 (ENSG00000108256)	TAOK1 (ENSG00000160551) #11	ABHD15 (ENSG00000168792) #13	TP53I13 (ENSG00000167543) #14	GIT1 (ENSG00000108262) #15	ANKRD13B (ENSG00000198720) #16	CORO6 (ENSG00000167549) #17	SSH2 (ENSG00000141298) #19	EFCAB5 (ENSG00000176927) #21	NSRP1 (ENSG00000126653) #22	SLC6A4 (ENSG00000108576) #23	BLMH (ENSG00000108578) #24	TMIGD1 (ENSG00000182271) #25	CPD (ENSG00000108582) #26	GOSR1 (ENSG00000108587) #27	CRLF3 (ENSG00000176390)	ATAD5 (ENSG00000176208)	TEFM (ENSG00000172171)	ADAP2 (ENSG00000184060)	RNF135 (ENSG00000181481)	NF1 (ENSG00000196712)	OMG (ENSG00000126861)	EVI2B (ENSG00000185862)	ENSG00000265118	EVI2A (ENSG00000126860)
Pan	ANCESTRAL SPECIES	3	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00530000063282.t.i	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384.d	ENSGT00390000016493.b.b	ENSGT00390000012364	ENSGT00940000153469.a.b.g.a
Chimpanzee	MODERN SPECIES	8	SEZ6 (ENSPTRG00000008942)	ENSPTRG00000049323	PIPOX (ENSPTRG00000008944)	MYO18A (ENSPTRG00000023928)	CRYBA1 (ENSPTRG00000008946)	NUFIP2 (ENSPTRG00000008947)	TAOK1 (ENSPTRG00000008948) #11	ABHD15 (ENSPTRG00000008950) #13	TP53I13 (ENSPTRG00000008951) #14	GIT1 (ENSPTRG00000008952) #15	ANKRD13B (ENSPTRG00000023124) #16	CORO6 (ENSPTRG00000008954) #17	SSH2 (ENSPTRG00000008955) #19	ENSPTRG00000015870	EFCAB5 (ENSPTRG00000008956) #21	NSRP1 (ENSPTRG00000008957) #22	SLC6A4 (ENSPTRG00000008958) #23	BLMH (ENSPTRG00000008959) #24	TMIGD1 (ENSPTRG00000008960) #25	CPD (ENSPTRG00000008961) #26	GOSR1 (ENSPTRG00000008962) #27	ENSPTRG00000034311	ENSPTRG00000046163	OMG (ENSPTRG00000008971)	EVI2B (ENSPTRG00000008972)	EVI2A (ENSPTRG00000008973)	NF1 (ENSPTRG00000008970)	RAB11FIP4 (ENSPTRG00000008974)	COPRS (ENSPTRG00000008976)	UTP6 (ENSPTRG00000008977)	SUZ12 (ENSPTRG00000008980)
Bonobo	MODERN SPECIES	8	SEZ6 (ENSPPAG00000015343)	PIPOX (ENSPPAG00000034881)	ENSPPAG00000006802	MYO18A (ENSPPAG00000031681)	CRYBA1 (ENSPPAG00000006625)	NUFIP2 (ENSPPAG00000030125)	TAOK1 (ENSPPAG00000023340) #11	ABHD15 (ENSPPAG00000042269) #13	TP53I13 (ENSPPAG00000029820) #14	GIT1 (ENSPPAG00000029400) #15	ANKRD13B (ENSPPAG00000030807) #16	CORO6 (ENSPPAG00000018991) #17	SSH2 (ENSPPAG00000033517) #19	ENSPPAG00000028228	EFCAB5 (ENSPPAG00000041466) #21	NSRP1 (ENSPPAG00000003543) #22	SLC6A4 (ENSPPAG00000029991) #23	BLMH (ENSPPAG00000034756) #24	TMIGD1 (ENSPPAG00000001123) #25	CPD (ENSPPAG00000043119) #26	GOSR1 (ENSPPAG00000030960) #27	ENSPPAG00000041074	ENSPPAG00000024356	ENSPPAG00000036506	OMG (ENSPPAG00000006082)	EVI2B (ENSPPAG00000034150)	EVI2A (ENSPPAG00000020883)	NF1 (ENSPPAG00000030406)	RAB11FIP4 (ENSPPAG00000036623)	ENSPPAG00000039082	UTP6 (ENSPPAG00000038089)
Orangutan	MODERN SPECIES	8	SEZ6 (ENSPPYG00000008117)	ENSPPYG00000001133	PIPOX (ENSPPYG00000008118)	MYO18A (ENSPPYG00000008119)	CRYBA1 (ENSPPYG00000008120)	NUFIP2 (ENSPPYG00000008121)	ENSPPYG00000037984	TAOK1 (ENSPPYG00000008122) #11	ABHD15 (ENSPPYG00000008123) #13	TP53I13 (ENSPPYG00000008124) #14	GIT1 (ENSPPYG00000008125) #15	ANKRD13B (ENSPPYG00000008126) #16	CORO6 (ENSPPYG00000008127) #17	SSH2 (ENSPPYG00000008128) #19	EFCAB5 (ENSPPYG00000008129) #21	NSRP1 (ENSPPYG00000008130) #22	SLC6A4 (ENSPPYG00000008131) #23	BLMH (ENSPPYG00000008132) #24	TMIGD1 (ENSPPYG00000008133) #25	CPD (ENSPPYG00000008134) #26	GOSR1 (ENSPPYG00000037798) #27	ENSPPYG00000035712	ENSPPYG00000008137	ENSPPYG00000036514	ENSPPYG00000008140	UTP6 (ENSPPYG00000008154)	COPRS (ENSPPYG00000008153)	RAB11FIP4 (ENSPPYG00000008152)	NF1 (ENSPPYG00000008147)	EVI2A (ENSPPYG00000008150)	EVI2B (ENSPPYG00000008149)
Gibbon	MODERN SPECIES	9	ENSNLEG00000028645	MYO18A (ENSNLEG00000003253)	CRYBA1 (ENSNLEG00000003279)	NUFIP2 (ENSNLEG00000003299)	ENSNLEG00000029287	TAOK1 (ENSNLEG00000003307) #11	ABHD15 (ENSNLEG00000003384) #13	ENSNLEG00000003390 #14	GIT1 (ENSNLEG00000003394) #15	ANKRD13B (ENSNLEG00000003518) #16	CORO6 (ENSNLEG00000003532) #17	SSH2 (ENSNLEG00000003553) #19	ENSNLEG00000003631	ENSNLEG00000003634	EFCAB5 (ENSNLEG00000003577) #21	NSRP1 (ENSNLEG00000003642) #22	SLC6A4 (ENSNLEG00000003658) #23	BLMH (ENSNLEG00000036327) #24	TMIGD1 (ENSNLEG00000003694) #25	CPD (ENSNLEG00000003707) #26	GOSR1 (ENSNLEG00000003722) #27	OMG (ENSNLEG00000010979)	EVI2B (ENSNLEG00000010983)	EVI2A (ENSNLEG00000010986)	NF1 (ENSNLEG00000010582)	RAB11FIP4 (ENSNLEG00000010989)	COPRS (ENSNLEG00000028290)	UTP6 (ENSNLEG00000011009)	SUZ12 (ENSNLEG00000011117)	ENSNLEG00000030637	ENSNLEG00000034989
Cercopithecidae	ANCESTRAL SPECIES	6	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT01000000215472	ENSGT00390000007384	ENSGT00390000016493.b.b	ENSGT00390000012364
Rhinopithecus	ANCESTRAL SPECIES	81	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00390000014853.d	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688.i #27
Black snub-nosed monkey	MODERN SPECIES	1745	PHF12 (ENSRBIG00000030211)	SEZ6 (ENSRBIG00000033582)	PIPOX (ENSRBIG00000030190)	MYO18A (ENSRBIG00000044716)	CRYBA1 (ENSRBIG00000024572)	NUFIP2 (ENSRBIG00000032631)	ENSRBIG00000034875 #11	ABHD15 (ENSRBIG00000028633) #13	TP53I13 (ENSRBIG00000029734) #14	GIT1 (ENSRBIG00000036443) #15	ANKRD13B (ENSRBIG00000042032) #16	CORO6 (ENSRBIG00000034613) #17	SSH2 (ENSRBIG00000036544) #19	ENSRBIG00000027332	EFCAB5 (ENSRBIG00000022175) #21	NSRP1 (ENSRBIG00000044358) #22	SLC6A4 (ENSRBIG00000031980) #23	BLMH (ENSRBIG00000034483) #24	TMIGD1 (ENSRBIG00000010757) #25	ENSRBIG00000031537	CPD (ENSRBIG00000008903) #26	ENSRBIG00000031761 #27
Golden snub-nosed monkey	MODERN SPECIES	1364						TAOK1 (ENSRROG00000033635) #11	ABHD15 (ENSRROG00000012258) #13	TP53I13 (ENSRROG00000040190) #14	GIT1 (ENSRROG00000007047) #15	ANKRD13B (ENSRROG00000034254) #16	CORO6 (ENSRROG00000003038) #17	SSH2 (ENSRROG00000016442) #19	ENSRROG00000029465	EFCAB5 (ENSRROG00000032468) #21	ENSRROG00000029745	NSRP1 (ENSRROG00000033310) #22	SLC6A4 (ENSRROG00000041763) #23	BLMH (ENSRROG00000031253) #24	TMIGD1 (ENSRROG00000008265) #25	CPD (ENSRROG00000043114) #26	ENSRROG00000034479 #27
Cercopithecinae	ANCESTRAL SPECIES	4	ENSGT00390000002919.v.b.b	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000162701.d	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT01000000215472	ENSGT00390000007384	ENSGT00390000016493.b.b
Vervet Monkey	MODERN SPECIES	7	DHRS13 (ENSCSAG00000007088)	PHF12 (ENSCSAG00000007077)	SEZ6 (ENSCSAG00000007067)	PIPOX (ENSCSAG00000007055)	MYO18A (ENSCSAG00000007039)	CRYBA1 (ENSCSAG00000007018)	NUFIP2 (ENSCSAG00000007009)	ENSCSAG00000006988 #11	ABHD15 (ENSCSAG00000006949) #13	TP53I13 (ENSCSAG00000006947) #14	GIT1 (ENSCSAG00000006944) #15	ANKRD13B (ENSCSAG00000006932) #16	CORO6 (ENSCSAG00000006924) #17	SSH2 (ENSCSAG00000006917) #19	EFCAB5 (ENSCSAG00000006906) #21	NSRP1 (ENSCSAG00000006841) #22	ENSCSAG00000006829	SLC6A4 (ENSCSAG00000006816) #23	BLMH (ENSCSAG00000006807) #24	ENSCSAG00000006805 #25	ENSCSAG00000006801	CPD (ENSCSAG00000006796) #26	GOSR1 (ENSCSAG00000006780) #27	ENSCSAG00000006750	ENSCSAG00000006710	NF1 (ENSCSAG00000006654)	OMG (ENSCSAG00000000560)	EVI2B (ENSCSAG00000006622)	EVI2A (ENSCSAG00000006619)	RAB11FIP4 (ENSCSAG00000006613)	ENSCSAG00000006606
Cercopithecinae_a	ANCESTRAL SPECIES	4	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00390000014853.d	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000162701.d	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT01000000215472	ENSGT00390000007384	ENSGT00390000016493.b.b
Macaca	ANCESTRAL SPECIES	4	ENSGT00390000002919.v.b.b	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00390000014853.d	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000162701.d	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00910000148586	ENSGT01000000215472	ENSGT00390000007384
Pig-tailed macaque	MODERN SPECIES	97	PIPOX (ENSMNEG00000030320)	MYO18A (ENSMNEG00000034174)	CRYBA1 (ENSMNEG00000040488)	NUFIP2 (ENSMNEG00000038891)	ENSMNEG00000042302	TAOK1 (ENSMNEG00000044940) #11	ABHD15 (ENSMNEG00000038658) #13	TP53I13 (ENSMNEG00000043090) #14	GIT1 (ENSMNEG00000035276) #15	ANKRD13B (ENSMNEG00000038142) #16	CORO6 (ENSMNEG00000032130) #17	SSH2 (ENSMNEG00000038174) #19	ENSMNEG00000030832	EFCAB5 (ENSMNEG00000038666) #21	ENSMNEG00000040190	NSRP1 (ENSMNEG00000039986) #22	SLC6A4 (ENSMNEG00000029430) #23	BLMH (ENSMNEG00000032533) #24	TMIGD1 (ENSMNEG00000040796) #25	CPD (ENSMNEG00000035304) #26	GOSR1 (ENSMNEG00000029759) #27	ENSMNEG00000035508	ENSMNEG00000038368
Macaca_a	ANCESTRAL SPECIES	4	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000162701.d	ENSGT01100000263493.a.a.a.b.b.b.b.a.b.b.b.a.a.b	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00910000148586	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.a.b.a.a.a.a.b.c.b
Rhesus	MODERN SPECIES	7	PHF12 (ENSMMUG00000021554)	SEZ6 (ENSMMUG00000021557)	PIPOX (ENSMMUG00000009937)	MYO18A (ENSMMUG00000009938)	CRYBA1 (ENSMMUG00000012855)	NUFIP2 (ENSMMUG00000012856)	TAOK1 (ENSMMUG00000019667) #11	ENSMMUG00000057447	ABHD15 (ENSMMUG00000019670) #13	TP53I13 (ENSMMUG00000003866) #14	GIT1 (ENSMMUG00000014408) #15	ANKRD13B (ENSMMUG00000014409) #16	CORO6 (ENSMMUG00000014411) #17	SSH2 (ENSMMUG00000014413) #19	EFCAB5 (ENSMMUG00000012118) #21	NSRP1 (ENSMMUG00000012121) #22	SLC6A4 (ENSMMUG00000003515) #23	BLMH (ENSMMUG00000001026) #24	TMIGD1 (ENSMMUG00000056200) #25	CPD (ENSMMUG00000037644) #26	GOSR1 (ENSMMUG00000023698) #27	ENSMMUG00000050728	CCL4L1 (ENSMMUG00000020102)	ENSMMUG00000062917	ENSMMUG00000055819	NF1 (ENSMMUG00000008605)	ENSMMUG00000051704	OMG (ENSMMUG00000006824)	EVI2B (ENSMMUG00000008603)	EVI2A (ENSMMUG00000008604)	RAB11FIP4 (ENSMMUG00000008127)
Crab-eating macaque	MODERN SPECIES	7	PHF12 (ENSMFAG00000036394)	SEZ6 (ENSMFAG00000038743)	PIPOX (ENSMFAG00000027393)	MYO18A (ENSMFAG00000036928)	CRYBA1 (ENSMFAG00000002646)	NUFIP2 (ENSMFAG00000040845)	TAOK1 (ENSMFAG00000041025) #11	ABHD15 (ENSMFAG00000033088) #13	TP53I13 (ENSMFAG00000040828) #14	GIT1 (ENSMFAG00000039346) #15	ANKRD13B (ENSMFAG00000002123) #16	CORO6 (ENSMFAG00000042987) #17	SSH2 (ENSMFAG00000033235) #19	ENSMFAG00000063340	EFCAB5 (ENSMFAG00000015172) #21	NSRP1 (ENSMFAG00000055182) #22	ENSMFAG00000061523	SLC6A4 (ENSMFAG00000002876) #23	BLMH (ENSMFAG00000001589) #24	TMIGD1 (ENSMFAG00000042486) #25	CPD (ENSMFAG00000042013) #26	GOSR1 (ENSMFAG00000038581) #27	ENSMFAG00000043507	ENSMFAG00000055017	ENSMFAG00000033846	ENSMFAG00000062468	ENSMFAG00000030053	ENSMFAG00000059147	ENSMFAG00000047278	ENSMFAG00000054369	ENSMFAG00000051027
Cercopithecinae_b	DUPLICATION
Cercopithecinae_b	ANCESTRAL SPECIES																	ENSGT00940000154049.a.k #22
Cercopithecinae_d	ANCESTRAL SPECIES																	ENSGT00940000154049.a.k #22
Sooty mangabey	MODERN SPECIES	238	TYW3 (ENSCATG00000044397)	LHX8 (ENSCATG00000037914)	SLC44A5 (ENSCATG00000042746)	ACADM (ENSCATG00000038563)	RABGGTB (ENSCATG00000036765)	MSH4 (ENSCATG00000035706)	ASB17 (ENSCATG00000033818)	ST6GALNAC3 (ENSCATG00000032996)	ENSCATG00000040985	ENSCATG00000032492	ST6GALNAC5 (ENSCATG00000030623)	PIGK (ENSCATG00000035025)	AK5 (ENSCATG00000032005)	ZZZ3 (ENSCATG00000044640)	USP33 (ENSCATG00000043367)	ENSCATG00000031727 #22	MIGA1 (ENSCATG00000040301)	NEXN (ENSCATG00000044536)	FUBP1 (ENSCATG00000042126)	DNAJB4 (ENSCATG00000031058)	ENSCATG00000039650	GIPC2 (ENSCATG00000038384)	PTGFR (ENSCATG00000037227)	IFI44L (ENSCATG00000030541)	IFI44 (ENSCATG00000020674)	ENSCATG00000031313	ADGRL4 (ENSCATG00000041347)	ENSCATG00000041086	HELT (ENSCATG00000038980)
Cercopithecinae_b	ANCESTRAL SPECIES	33	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00390000014853.d	ENSGT00940000154049.a.l #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000162701.d	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT01000000215472	ENSGT00390000007384	ENSGT00390000016493.b.b	ENSGT00390000012364
Olive baboon	MODERN SPECIES	8	PIPOX (ENSPANG00000023365)	MYO18A (ENSPANG00000023354)	CRYBA1 (ENSPANG00000023297)	NUFIP2 (ENSPANG00000023299)	ENSPANG00000046772	ENSPANG00000044041	TAOK1 (ENSPANG00000023292) #11	ABHD15 (ENSPANG00000023277) #13	TP53I13 (ENSPANG00000023278) #14	GIT1 (ENSPANG00000023275) #15	ANKRD13B (ENSPANG00000023185) #16	CORO6 (ENSPANG00000023188) #17	SSH2 (ENSPANG00000023181) #19	EFCAB5 (ENSPANG00000023145) #21	ENSPANG00000048952	NSRP1 (ENSPANG00000050355) #22	SLC6A4 (ENSPANG00000023148) #23	BLMH (ENSPANG00000023153) #24	TMIGD1 (ENSPANG00000023154) #25	CPD (ENSPANG00000023156) #26	GOSR1 (ENSPANG00000023158) #27	NF1 (ENSPANG00000023142)	OMG (ENSPANG00000017962)	EVI2B (ENSPANG00000023110)	RAB11FIP4 (ENSPANG00000023111)	COPRS (ENSPANG00000023112)	UTP6 (ENSPANG00000023113)	SUZ12 (ENSPANG00000023097)	CRLF3 (ENSPANG00000023099)	ATAD5 (ENSPANG00000023096)	TEFM (ENSPANG00000023094)
Cercopithecinae_d	ANCESTRAL SPECIES	102	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00390000016972.a.a.b.b.b.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00390000014853.d	ENSGT00940000154049.a.l #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000162701.d
Sooty mangabey	MODERN SPECIES	175	PIPOX (ENSCATG00000033945)	ENSCATG00000020580	MYO18A (ENSCATG00000028433)	CRYBA1 (ENSCATG00000032650)	NUFIP2 (ENSCATG00000031290)	ENSCATG00000038699	TAOK1 (ENSCATG00000039512) #11	ABHD15 (ENSCATG00000037513) #13	TP53I13 (ENSCATG00000029969) #14	GIT1 (ENSCATG00000030439) #15	ANKRD13B (ENSCATG00000041808) #16	CORO6 (ENSCATG00000035094) #17	SSH2 (ENSCATG00000032138) #19	EFCAB5 (ENSCATG00000020158) #21	ENSCATG00000034184	NSRP1 (ENSCATG00000038363) #22	SLC6A4 (ENSCATG00000033371) #23	ENSCATG00000010486 #24	TMIGD1 (ENSCATG00000039086) #25	CPD (ENSCATG00000033329) #26	GOSR1 (ENSCATG00000036731) #27	ENSCATG00000039511
Drill	MODERN SPECIES	1044	ENSMLEG00000032813	SEZ6 (ENSMLEG00000027746)	PIPOX (ENSMLEG00000039610)	MYO18A (ENSMLEG00000043771)	CRYBA1 (ENSMLEG00000002189)	NUFIP2 (ENSMLEG00000036478)	TAOK1 (ENSMLEG00000030052) #11	ABHD15 (ENSMLEG00000030478) #13	TP53I13 (ENSMLEG00000042555) #14	GIT1 (ENSMLEG00000034127) #15	ANKRD13B (ENSMLEG00000030189) #16	CORO6 (ENSMLEG00000035196) #17	SSH2 (ENSMLEG00000039566) #19	EFCAB5 (ENSMLEG00000012434) #21	ENSMLEG00000033338	NSRP1 (ENSMLEG00000042611) #22	SLC6A4 (ENSMLEG00000007197) #23	BLMH (ENSMLEG00000033713) #24	TMIGD1 (ENSMLEG00000043140) #25	CPD (ENSMLEG00000034352) #26	GOSR1 (ENSMLEG00000043682) #27
Platyrrhini	ANCESTRAL SPECIES	1	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735.j #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384	ENSGT00390000016493.b.b	ENSGT00390000012364	ENSGT00940000153469.a.b
Cebidae	ANCESTRAL SPECIES	10	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735.j #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000009142	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384	ENSGT00390000016493.b.a	ENSGT00390000016493.b.b	ENSGT00390000012364
Marmoset	MODERN SPECIES	17	PIPOX (ENSCJAG00000013348)	MYO18A (ENSCJAG00000013358)	ENSCJAG00000078134	CRYBA1 (ENSCJAG00000013501)	NUFIP2 (ENSCJAG00000013508)	ENSCJAG00000069891	ENSCJAG00000044636	TAOK1 (ENSCJAG00000013516) #11	ABHD15 (ENSCJAG00000013574) #13	TP53I13 (ENSCJAG00000013575) #14	GIT1 (ENSCJAG00000013586) #15	ANKRD13B (ENSCJAG00000013623) #16	CORO6 (ENSCJAG00000013646) #17	SSH2 (ENSCJAG00000013673) #19	EFCAB5 (ENSCJAG00000013688) #21	NSRP1 (ENSCJAG00000013710) #22	ENSCJAG00000021934	SLC6A4 (ENSCJAG00000013726) #23	BLMH (ENSCJAG00000038993) #24	ENSCJAG00000080215	TMIGD1 (ENSCJAG00000013832) #25	CPD (ENSCJAG00000013845) #26	GOSR1 (ENSCJAG00000013915) #27	ENSCJAG00000077182	ENSCJAG00000087132	ENSCJAG00000083741	ENSCJAG00000076568	OMG (ENSCJAG00000057468)	EVI2B (ENSCJAG00000066576)	EVI2A (ENSCJAG00000014096)	NF1 (ENSCJAG00000013924)
Cebidae_a	ANCESTRAL SPECIES	1	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT01100000267123	ENSGT00940000157855 #23	ENSGT00390000001735.j #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00550000074797.b	ENSGT00940000160802	ENSGT00390000003004	ENSGT00440000033742.a.b	ENSGT00390000007384	ENSGT00390000016493.b.a	ENSGT00390000008040.t	ENSGT00390000012364	ENSGT00940000153469.a.b
Capuchin	MODERN SPECIES	140	PHF12 (ENSCCAG00000027354)	SEZ6 (ENSCCAG00000037681)	PIPOX (ENSCCAG00000002516)	MYO18A (ENSCCAG00000003364)	ENSCCAG00000029804	CRYBA1 (ENSCCAG00000032609)	NUFIP2 (ENSCCAG00000024630)	TAOK1 (ENSCCAG00000031617) #11	ABHD15 (ENSCCAG00000035155) #13	TP53I13 (ENSCCAG00000035669) #14	GIT1 (ENSCCAG00000037755) #15	ANKRD13B (ENSCCAG00000021287) #16	CORO6 (ENSCCAG00000023308) #17	SSH2 (ENSCCAG00000002036) #19	EFCAB5 (ENSCCAG00000035427) #21	NSRP1 (ENSCCAG00000025135) #22	ENSCCAG00000037211	SLC6A4 (ENSCCAG00000024873) #23	BLMH (ENSCCAG00000021169) #24	TMIGD1 (ENSCCAG00000036448) #25	CPD (ENSCCAG00000033205) #26	GOSR1 (ENSCCAG00000024938) #27	NF1 (ENSCCAG00000026547)	OMG (ENSCCAG00000017282)	EVI2A (ENSCCAG00000028523)	RAB11FIP4 (ENSCCAG00000027489)	COPRS (ENSCCAG00000010505)	ENSCCAG00000033318	ENSCCAG00000032928	SUZ12 (ENSCCAG00000037725)	CRLF3 (ENSCCAG00000020821)
Bolivian squirrel monkey	MODERN SPECIES	86	SEZ6 (ENSSBOG00000027912)	ENSSBOG00000021425	PIPOX (ENSSBOG00000024576)	ENSSBOG00000032228	MYO18A (ENSSBOG00000024287)	CRYBA1 (ENSSBOG00000026676)	ENSSBOG00000036071	TAOK1 (ENSSBOG00000028880) #11	ABHD15 (ENSSBOG00000035181) #13	TP53I13 (ENSSBOG00000023431) #14	GIT1 (ENSSBOG00000030183) #15	ANKRD13B (ENSSBOG00000024740) #16	CORO6 (ENSSBOG00000036164) #17	SSH2 (ENSSBOG00000020442) #19	EFCAB5 (ENSSBOG00000031421) #21	NSRP1 (ENSSBOG00000022240) #22	SLC6A4 (ENSSBOG00000034594) #23	BLMH (ENSSBOG00000022794) #24	TMIGD1 (ENSSBOG00000020667) #25	CPD (ENSSBOG00000032631) #26	GOSR1 (ENSSBOG00000025467) #27	NF1 (ENSSBOG00000025356)	OMG (ENSSBOG00000006881)	EVI2A (ENSSBOG00000021188)	RAB11FIP4 (ENSSBOG00000031433)	COPRS (ENSSBOG00000025181)	ENSSBOG00000027214	ENSSBOG00000032814	SUZ12 (ENSSBOG00000026122)	CRLF3 (ENSSBOG00000032340)
Mas night monkey	MODERN SPECIES	416	DHRS13 (ENSANAG00000030306)	PHF12 (ENSANAG00000037261)	SEZ6 (ENSANAG00000033610)	PIPOX (ENSANAG00000026771)	MYO18A (ENSANAG00000031804)	CRYBA1 (ENSANAG00000029654)	NUFIP2 (ENSANAG00000037766)	TAOK1 (ENSANAG00000026886) #11	ABHD15 (ENSANAG00000034798) #13	TP53I13 (ENSANAG00000037560) #14	GIT1 (ENSANAG00000022411) #15	ANKRD13B (ENSANAG00000022739) #16	CORO6 (ENSANAG00000037277) #17	SSH2 (ENSANAG00000035004) #19	EFCAB5 (ENSANAG00000029142) #21	NSRP1 (ENSANAG00000036718) #22	ENSANAG00000032683	SLC6A4 (ENSANAG00000037608) #23	ENSANAG00000027013 #24	TMIGD1 (ENSANAG00000033151) #25	CPD (ENSANAG00000036274) #26	GOSR1 (ENSANAG00000033659) #27	OMG (ENSANAG00000019586)	EVI2A (ENSANAG00000038419)	NF1 (ENSANAG00000036517)	RAB11FIP4 (ENSANAG00000025781)	ENSANAG00000021628	ENSANAG00000023634	ENSANAG00000021368	UTP6 (ENSANAG00000034603)	ENSANAG00000019084
Tarsier	MODERN SPECIES	4648									TP53I13 (ENSTSYG00000031604) #14	GIT1 (ENSTSYG00000028800) #15	ANKRD13B (ENSTSYG00000011764) #16	CORO6 (ENSTSYG00000031648) #17	ENSTSYG00000029312	SSH2 (ENSTSYG00000000987) #19	EFCAB5 (ENSTSYG00000005855) #21	NSRP1 (ENSTSYG00000030918) #22	SLC6A4 (ENSTSYG00000003505) #23
Strepsirrhini	ANCESTRAL SPECIES	4	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855.a #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Lemuriformes	ANCESTRAL SPECIES	2	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855.a #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Lemuriformes_a	ANCESTRAL SPECIES		ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855.a #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Coquerels sifaka	MODERN SPECIES	696								TAOK1 (ENSPCOG00000025125) #11	ABHD15 (ENSPCOG00000015575) #13	TP53I13 (ENSPCOG00000027925) #14	GIT1 (ENSPCOG00000004787) #15	ANKRD13B (ENSPCOG00000013952) #16	CORO6 (ENSPCOG00000023232) #17	SSH2 (ENSPCOG00000015875) #19	EFCAB5 (ENSPCOG00000016009) #21	NSRP1 (ENSPCOG00000022352) #22	SLC6A4 (ENSPCOG00000024893) #23	BLMH (ENSPCOG00000027414) #24	TMIGD1 (ENSPCOG00000020818) #25	CPD (ENSPCOG00000022544) #26	GOSR1 (ENSPCOG00000026421) #27	TRARG1 (ENSPCOG00000015599) #28	ABR (ENSPCOG00000015494) #31	TIMM22 (ENSPCOG00000015206) #32	NXN (ENSPCOG00000014439) #33	MRM3 (ENSPCOG00000012539) #34	GLOD4 (ENSPCOG00000017196)	ENSPCOG00000009199 #35	GEMIN4 (ENSPCOG00000018836) #37	TLCD3A (ENSPCOG00000026088)	VPS53 (ENSPCOG00000028352)
Greater bamboo lemur	MODERN SPECIES	9														ENSPSMG00000009441	EFCAB5 (ENSPSMG00000009423) #21	NSRP1 (ENSPSMG00000009411) #22	SLC6A4 (ENSPSMG00000009379) #23
Mouse lemur	MODERN SPECIES	7	SEZ6 (ENSMICG00000032547)	PIPOX (ENSMICG00000005380)	MYO18A (ENSMICG00000013997)	CRYBA1 (ENSMICG00000038723)	NUFIP2 (ENSMICG00000016380)	TAOK1 (ENSMICG00000005354) #11	ABHD15 (ENSMICG00000005394) #13	TP53I13 (ENSMICG00000005403) #14	GIT1 (ENSMICG00000005414) #15	ANKRD13B (ENSMICG00000013392) #16	CORO6 (ENSMICG00000013407) #17	SSH2 (ENSMICG00000005441) #19	EFCAB5 (ENSMICG00000013739) #21	ENSMICG00000028804	ENSMICG00000046883	NSRP1 (ENSMICG00000006365) #22	ENSMICG00000046349	SLC6A4 (ENSMICG00000000345) #23	BLMH (ENSMICG00000000348) #24	TMIGD1 (ENSMICG00000028000) #25	CPD (ENSMICG00000007896) #26	GOSR1 (ENSMICG00000007911) #27	TRARG1 (ENSMICG00000028858) #28	ABR (ENSMICG00000009381) #31	TIMM22 (ENSMICG00000041939) #32	NXN (ENSMICG00000009368) #33	MRM3 (ENSMICG00000031420) #34	GLOD4 (ENSMICG00000009361)	ENSMICG00000027145 #35	GEMIN4 (ENSMICG00000033667) #37	TLCD3A (ENSMICG00000009347)
Bushbaby	DUPLICATION
Bushbaby	MODERN SPECIES	227	DHRS13 (ENSOGAG00000016323)	PHF12 (ENSOGAG00000007952)	SEZ6 (ENSOGAG00000007954)	PIPOX (ENSOGAG00000007383)	MYO18A (ENSOGAG00000007386)	CRYBA1 (ENSOGAG00000014064)	NUFIP2 (ENSOGAG00000007400)	TAOK1 (ENSOGAG00000000795) #11	ABHD15 (ENSOGAG00000000799) #13	TP53I13 (ENSOGAG00000026720) #14	GIT1 (ENSOGAG00000000800) #15	ANKRD13B (ENSOGAG00000000803) #16	CORO6 (ENSOGAG00000000806) #17	SSH2 (ENSOGAG00000000807) #19	EFCAB5 (ENSOGAG00000000812) #21	ENSOGAG00000000820 #22	ENSOGAG00000030883 #23
Bushbaby	MODERN SPECIES	364	SRPK3 (ENSOGAG00000003138)	PLXNB3 (ENSOGAG00000003133)	ABCD1 (ENSOGAG00000027153)	BCAP31 (ENSOGAG00000006721)	ENSOGAG00000031270	PNCK (ENSOGAG00000006718)	DUSP9 (ENSOGAG00000002412)	ENSOGAG00000033279	ATP2B3 (ENSOGAG00000008921)	BGN (ENSOGAG00000008920)	ENSOGAG00000029324	HAUS7 (ENSOGAG00000008917)	TREX2 (ENSOGAG00000033175)	ZFP92 (ENSOGAG00000029963)	ENSOGAG00000031649	ENSOGAG00000032682 #22	ENSOGAG00000030548	ENSOGAG00000029555
Laurasiatheria	ANCESTRAL SPECIES	4	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00940000179359	ENSGT00940000166642	ENSGT00390000012340
Eulipotyphla	ANCESTRAL SPECIES	1317																ENSGT00940000154049.a #22	ENSGT00940000157855 #23
Common shrew	MODERN SPECIES	5561																ENSSARG00000008822 #22
Hedgehog	MODERN SPECIES	2559																NSRP1 (ENSEEUG00000007998) #22	SLC6A4 (ENSEEUG00000008087) #23
Laurasiatheria_a	ANCESTRAL SPECIES	4	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00980000203317	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00940000179359	ENSGT00940000166642	ENSGT00390000012340
Artiodactyla	ANCESTRAL SPECIES	4	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00980000203317	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Suina	ANCESTRAL SPECIES		ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT01030000235034	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00940000166642	ENSGT00390000012340	ENSGT00390000017317 #34	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Pig	MODERN SPECIES	3	CRYBA1 (ENSSSCG00000040641)	NUFIP2 (ENSSSCG00000017785)	ENSSSCG00000051715	TAOK1 (ENSSSCG00000017790) #11	ABHD15 (ENSSSCG00000017789) #13	ENSSSCG00000035275	TP53I13 (ENSSSCG00000017788) #14	GIT1 (ENSSSCG00000017787) #15	ANKRD13B (ENSSSCG00000017793) #16	CORO6 (ENSSSCG00000017792) #17	SSH2 (ENSSSCG00000052963) #19	ENSSSCG00000054045	ENSSSCG00000047097	EFCAB5 (ENSSSCG00000017794) #21	ENSSSCG00000035112	NSRP1 (ENSSSCG00000017795) #22	SLC6A4 (ENSSSCG00000017797) #23	BLMH (ENSSSCG00000017796) #24	TMIGD1 (ENSSSCG00000017798) #25	CPD (ENSSSCG00000017799) #26	GOSR1 (ENSSSCG00000029262) #27	TRARG1 (ENSSSCG00000017801) #28	BHLHA9 (ENSSSCG00000017802) #29	ABR (ENSSSCG00000017804) #31	TIMM22 (ENSSSCG00000017803) #32	NXN (ENSSSCG00000028720) #33	MRM3 (ENSSSCG00000017806) #34	GEMIN4 (ENSSSCG00000017809) #37	ENSSSCG00000063547 #35	TLCD3A (ENSSSCG00000017810)	ENSSSCG00000057748
Chacoan peccary	MODERN SPECIES	2	PHF12 (ENSCWAG00000003661)	SEZ6 (ENSCWAG00000003587)	PIPOX (ENSCWAG00000003501)	MYO18A (ENSCWAG00000003393)	CRYBA1 (ENSCWAG00000003348)	NUFIP2 (ENSCWAG00000003332)	TAOK1 (ENSCWAG00000003281) #11	ABHD15 (ENSCWAG00000003219) #13	TP53I13 (ENSCWAG00000003206) #14	GIT1 (ENSCWAG00000003160) #15	ANKRD13B (ENSCWAG00000003135) #16	CORO6 (ENSCWAG00000003109) #17	ENSCWAG00000003089	SSH2 (ENSCWAG00000002998) #19	ENSCWAG00000002964	NSRP1 (ENSCWAG00000002885) #22	SLC6A4 (ENSCWAG00000002858) #23	BLMH (ENSCWAG00000002837) #24	TMIGD1 (ENSCWAG00000002804) #25	CPD (ENSCWAG00000002748) #26	GOSR1 (ENSCWAG00000002709) #27	TRARG1 (ENSCWAG00000002697) #28	BHLHA9 (ENSCWAG00000002687) #29	ABR (ENSCWAG00000002358) #31	TIMM22 (ENSCWAG00000002276) #32	NXN (ENSCWAG00000002248) #33	ENSCWAG00000002226	GLOD4 (ENSCWAG00000002208)	GEMIN4 (ENSCWAG00000002194) #37	TLCD3A (ENSCWAG00000002177)	VPS53 (ENSCWAG00000002129)
Artiodactyla_a	ANCESTRAL SPECIES	3	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Artiodactyla_b	ANCESTRAL SPECIES	3	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Cetacea	ANCESTRAL SPECIES	5	ENSGT00940000156995	ENSGT00390000011000	ENSGT00950000185134	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Odontoceti	ANCESTRAL SPECIES	17	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000154531.k.a.b	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Odontoceti_a	ANCESTRAL SPECIES	18	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000154531.k.a.b	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Odontoceti_b	ANCESTRAL SPECIES	20	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000154531.k.a.b	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Monodontidae	ANCESTRAL SPECIES	21	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000154531.k.a.b	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Narwhal	MODERN SPECIES	316	PHF12 (ENSMMNG00015017343)	SEZ6 (ENSMMNG00015017109)	PIPOX (ENSMMNG00015017049)	MYO18A (ENSMMNG00015016717)	CRYBA1 (ENSMMNG00015016618)	NUFIP2 (ENSMMNG00015016583)	ENSMMNG00015016560	TAOK1 (ENSMMNG00015016503) #11	ABHD15 (ENSMMNG00015016465) #13	TP53I13 (ENSMMNG00015016436) #14	GIT1 (ENSMMNG00015016362) #15	ANKRD13B (ENSMMNG00015016276) #16	CORO6 (ENSMMNG00015016225) #17	SSH2 (ENSMMNG00015016017) #19	EFCAB5 (ENSMMNG00015015923) #21	NSRP1 (ENSMMNG00015015859) #22	SLC6A4 (ENSMMNG00015015795) #23	BLMH (ENSMMNG00015021724) #24	TMIGD1 (ENSMMNG00015021706) #25	CPD (ENSMMNG00015021681) #26	GOSR1 (ENSMMNG00015021652) #27	TRARG1 (ENSMMNG00015021641) #28	ENSMMNG00015021630 #29	ABR (ENSMMNG00015021507) #31	TIMM22 (ENSMMNG00015021436) #32	NXN (ENSMMNG00015021423) #33	MRM3 (ENSMMNG00015021415) #34	GLOD4 (ENSMMNG00015021396)	GEMIN4 (ENSMMNG00015021379) #37	TLCD3A (ENSMMNG00015021359)	VPS53 (ENSMMNG00015021310)
Beluga whale	MODERN SPECIES	43	PIPOX (ENSDLEG00000006845)	SEZ6 (ENSDLEG00000006863)	MYO18A (ENSDLEG00000006896)	CRYBA1 (ENSDLEG00000007018)	NUFIP2 (ENSDLEG00000007051)	TAOK1 (ENSDLEG00000007084) #11	ENSDLEG00000007134	ENSDLEG00000007141	ABHD15 (ENSDLEG00000007149) #13	ENSDLEG00000007165 #14	GIT1 (ENSDLEG00000007196) #15	ANKRD13B (ENSDLEG00000007262) #16	CORO6 (ENSDLEG00000007308) #17	SSH2 (ENSDLEG00000007331) #19	EFCAB5 (ENSDLEG00000007361) #21	NSRP1 (ENSDLEG00000007376) #22	SLC6A4 (ENSDLEG00000007391) #23	BLMH (ENSDLEG00000007404) #24	TMIGD1 (ENSDLEG00000007433) #25	CPD (ENSDLEG00000007444) #26	GOSR1 (ENSDLEG00000007474) #27	TRARG1 (ENSDLEG00000007482) #28	ENSDLEG00000007490 #29	ABR (ENSDLEG00000007499) #31	TIMM22 (ENSDLEG00000007524) #32	NXN (ENSDLEG00000007537) #33	MRM3 (ENSDLEG00000007546) #34	GLOD4 (ENSDLEG00000007561)	GEMIN4 (ENSDLEG00000007580) #37	FAM57A (ENSDLEG00000007586)	VPS53 (ENSDLEG00000007623)
Vaquita	MODERN SPECIES	12	SEZ6 (ENSPSNG00000015182)	PIPOX (ENSPSNG00000015048)	MYO18A (ENSPSNG00000014591)	CRYBA1 (ENSPSNG00000014388)	NUFIP2 (ENSPSNG00000014306)	ENSPSNG00000014235	TAOK1 (ENSPSNG00000014127) #11	ENSPSNG00000014062	ABHD15 (ENSPSNG00000014014) #13	TP53I13 (ENSPSNG00000013922) #14	GIT1 (ENSPSNG00000013740) #15	ANKRD13B (ENSPSNG00000013650) #16	CORO6 (ENSPSNG00000013564) #17	SSH2 (ENSPSNG00000013352) #19	EFCAB5 (ENSPSNG00000022405) #21	NSRP1 (ENSPSNG00000022390) #22	SLC6A4 (ENSPSNG00000022384) #23	BLMH (ENSPSNG00000022379) #24	TMIGD1 (ENSPSNG00000022377) #25	CPD (ENSPSNG00000022352) #26	GOSR1 (ENSPSNG00000022335) #27	TRARG1 (ENSPSNG00000022327) #28	ENSPSNG00000022324 #29	ABR (ENSPSNG00000022283) #31	TIMM22 (ENSPSNG00000022237) #32	NXN (ENSPSNG00000022221) #33	MRM3 (ENSPSNG00000022211) #34	GLOD4 (ENSPSNG00000022203)	GEMIN4 (ENSPSNG00000022192) #37	TLCD3A (ENSPSNG00000022168)	VPS53 (ENSPSNG00000022122)
Dolphin	MODERN SPECIES	3354						CRYBA1 (ENSTTRG00000016327)	NUFIP2 (ENSTTRG00000016328)	TAOK1 (ENSTTRG00000016329) #11	ABHD15 (ENSTTRG00000016330) #13	TP53I13 (ENSTTRG00000016331) #14	GIT1 (ENSTTRG00000016332) #15	ANKRD13B (ENSTTRG00000016333) #16	CORO6 (ENSTTRG00000016335) #17	SSH2 (ENSTTRG00000016336) #19	EFCAB5 (ENSTTRG00000016337) #21	NSRP1 (ENSTTRG00000016338) #22	SLC6A4 (ENSTTRG00000016339) #23	BLMH (ENSTTRG00000016341) #24	TMIGD1 (ENSTTRG00000016343) #25	CPD (ENSTTRG00000016344) #26	GOSR1 (ENSTTRG00000016349) #27
Sperm whale	MODERN SPECIES	5	ENSPCTG00005010025	SDF2 (ENSPCTG00005009994)	FAM222B (ENSPCTG00005009934)	ERAL1 (ENSPCTG00005009863)	FLOT2 (ENSPCTG00005009525)	PHF12 (ENSPCTG00005009244)	ENSPCTG00005008427	CRYBA1 (ENSPCTG00005008325)	NUFIP2 (ENSPCTG00005008302)	ENSPCTG00005008270	TAOK1 (ENSPCTG00005008207) #11	ABHD15 (ENSPCTG00005008187) #13	ANKRD13B (ENSPCTG00005008122) #16	CORO6 (ENSPCTG00005008092) #17	SSH2 (ENSPCTG00005007991) #19	NSRP1 (ENSPCTG00005007913) #22	SLC6A4 (ENSPCTG00005007871) #23	BLMH (ENSPCTG00005007833) #24	TMIGD1 (ENSPCTG00005007791) #25	CPD (ENSPCTG00005007651) #26	GOSR1 (ENSPCTG00005007581) #27	TRARG1 (ENSPCTG00005007551) #28	BHLHA9 (ENSPCTG00005007536) #29	ABR (ENSPCTG00005007316) #31	TIMM22 (ENSPCTG00005007258) #32	ENSPCTG00005007239	ENSPCTG00005007222	RPH3AL (ENSPCTG00005007176)	DOC2B (ENSPCTG00005007116)	YWHAE (ENSPCTG00005007078)	CRK (ENSPCTG00005007046)
Blue whale	MODERN SPECIES	12	SEZ6 (ENSBMSG00010020370)	PIPOX (ENSBMSG00010020496)	ENSBMSG00010020510	MYO18A (ENSBMSG00010014109)	CRYBA1 (ENSBMSG00010015770)	NUFIP2 (ENSBMSG00010016116)	TAOK1 (ENSBMSG00010016159) #11	ENSBMSG00010016195	ABHD15 (ENSBMSG00010016208) #13	TP53I13 (ENSBMSG00010016231) #14	GIT1 (ENSBMSG00010016292) #15	ANKRD13B (ENSBMSG00010016542) #16	CORO6 (ENSBMSG00010016595) #17	SSH2 (ENSBMSG00010016655) #19	EFCAB5 (ENSBMSG00010016863) #21	NSRP1 (ENSBMSG00010016930) #22	SLC6A4 (ENSBMSG00010016971) #23	ENSBMSG00010017005 #24	TMIGD1 (ENSBMSG00010017079) #25	CPD (ENSBMSG00010017172) #26	GOSR1 (ENSBMSG00010017300) #27	TRARG1 (ENSBMSG00010017380) #28	BHLHA9 (ENSBMSG00010017399) #29	ABR (ENSBMSG00010017514) #31	TIMM22 (ENSBMSG00010017831) #32	NXN (ENSBMSG00010017866) #33	MRM3 (ENSBMSG00010017916) #34	GLOD4 (ENSBMSG00010017934)	GEMIN4 (ENSBMSG00010017959) #37	TLCD3A (ENSBMSG00010018000)	VPS53 (ENSBMSG00010018077)
Pecora	ANCESTRAL SPECIES	1	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Yarkand deer	MODERN SPECIES	28	PHF12 (ENSCHYG00000013941)	SEZ6 (ENSCHYG00000014320)	PIPOX (ENSCHYG00000014518)	MYO18A (ENSCHYG00000014602)	CRYBA1 (ENSCHYG00000015706)	NUFIP2 (ENSCHYG00000015796)	TAOK1 (ENSCHYG00000016104) #11	ABHD15 (ENSCHYG00000016419) #13	ENSCHYG00000016455 #12	ENSCHYG00000016493 #14	GIT1 (ENSCHYG00000016767) #15	ANKRD13B (ENSCHYG00000006543) #16	CORO6 (ENSCHYG00000006582) #17	SSH2 (ENSCHYG00000006647) #19	EFCAB5 (ENSCHYG00000006857) #21	NSRP1 (ENSCHYG00000006901) #22	SLC6A4 (ENSCHYG00000007006) #23	BLMH (ENSCHYG00000007137) #24	TMIGD1 (ENSCHYG00000007287) #25	CPD (ENSCHYG00000007350) #26	ENSCHYG00000007624	ENSCHYG00000007643	GOSR1 (ENSCHYG00000007664) #27	TRARG1 (ENSCHYG00000007763) #28	ABR (ENSCHYG00000007909) #31	TIMM22 (ENSCHYG00000008559) #32	NXN (ENSCHYG00000008628) #33	MRM3 (ENSCHYG00000008755) #34	GLOD4 (ENSCHYG00000008806)	GEMIN4 (ENSCHYG00000008958) #37	ENSCHYG00000008987 #35
Percora_a	ANCESTRAL SPECIES	2	ENSGT00970000197500	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT01100000264619	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Bovidae	ANCESTRAL SPECIES	2	ENSGT00970000197500	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.e.a #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Caprinae	ANCESTRAL SPECIES	1	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.e.a #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT00900000143173 #36
Rambouillet Sheep	DUPLICATION
Rambouillet Sheep	MODERN SPECIES	1	SLITRK6 (ENSOARG00020003278)	ENSOARG00020003340	ENSOARG00020003363	ENSOARG00020003396	ENSOARG00020003415	ENSOARG00020003428	ENSOARG00020003440	SLITRK5 (ENSOARG00020003517)	ENSOARG00020003564	GPC5 (ENSOARG00020003688)	GPC6 (ENSOARG00020003765)	DCT (ENSOARG00020003829)	TGDS (ENSOARG00020003861)	GPR180 (ENSOARG00020003965)	SOX21 (ENSOARG00020004000)	ENSOARG00020004016 #22	ENSOARG00020004163	ENSOARG00020006241	ENSOARG00020009052	ENSOARG00020009084	ENSOARG00020009261	ENSOARG00020009349	ENSOARG00020011042	ENSOARG00020011134	ENSOARG00020013181	ENSOARG00020017315	ENSOARG00020017372	CLDN10 (ENSOARG00020017535)	DNAJC3 (ENSOARG00020017767)	UGGT2 (ENSOARG00020018084)	HS6ST3 (ENSOARG00020019560)
Rambouillet Sheep	MODERN SPECIES	2	PHF12 (ENSOARG00020020440)	SEZ6 (ENSOARG00020019891)	PIPOX (ENSOARG00020019778)	MYO18A (ENSOARG00020018318)	CRYBA1 (ENSOARG00020018168)	ENSOARG00020018112	TAOK1 (ENSOARG00020017921) #11	ENSOARG00020017883 #12	ABHD15 (ENSOARG00020017850) #13	TP53I13 (ENSOARG00020017805) #14	GIT1 (ENSOARG00020016839) #15	ANKRD13B (ENSOARG00020016692) #16	CORO6 (ENSOARG00020016624) #17	SSH2 (ENSOARG00020015697) #19	EFCAB5 (ENSOARG00020015486) #21	ENSOARG00020015347 #22	SLC6A4 (ENSOARG00020014883) #23	BLMH (ENSOARG00020014682) #24	TMIGD1 (ENSOARG00020014572) #25	CPD (ENSOARG00020014144) #26	GOSR1 (ENSOARG00020013961) #27	TRARG1 (ENSOARG00020013901) #28	BHLHA9 (ENSOARG00020013885) #29	ABR (ENSOARG00020012730) #31	TIMM22 (ENSOARG00020012618) #32	NXN (ENSOARG00020012484) #33	MRM3 (ENSOARG00020012429) #34	GLOD4 (ENSOARG00020012356)	ENSOARG00020012330 #35	ENSOARG00020012285 #37	TLCD3A (ENSOARG00020012176)
Goat	MODERN SPECIES	10	FLOT2 (ENSCHIG00000018147)	DHRS13 (ENSCHIG00000014934)	PHF12 (ENSCHIG00000019992)	SEZ6 (ENSCHIG00000010605)	PIPOX (ENSCHIG00000011546)	MYO18A (ENSCHIG00000011736)	CRYBA1 (ENSCHIG00000013728)	NUFIP2 (ENSCHIG00000015671)	TAOK1 (ENSCHIG00000017203) #11	ABHD15 (ENSCHIG00000019260) #13	TP53I13 (ENSCHIG00000008978) #14	GIT1 (ENSCHIG00000021865) #15	ANKRD13B (ENSCHIG00000025821) #16	CORO6 (ENSCHIG00000022522) #17	SSH2 (ENSCHIG00000014965) #19	NSRP1 (ENSCHIG00000021222) #22	SLC6A4 (ENSCHIG00000003163) #23	BLMH (ENSCHIG00000008496) #24	TMIGD1 (ENSCHIG00000018887) #25	CPD (ENSCHIG00000016123) #26	GOSR1 (ENSCHIG00000019607) #27	TRARG1 (ENSCHIG00000010508) #28	ABR (ENSCHIG00000023804) #31	TIMM22 (ENSCHIG00000015821) #32	NXN (ENSCHIG00000018214) #33	MRM3 (ENSCHIG00000025241) #34	GLOD4 (ENSCHIG00000009177)	ENSCHIG00000009182 #35	GEMIN4 (ENSCHIG00000026226) #37	ENSCHIG00000010602 #36	TLCD3A (ENSCHIG00000016315)
Bovinae	ANCESTRAL SPECIES		ENSGT00970000197500	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.e.a #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00940000166642	ENSGT00940000179359	ENSGT01030000235164	ENSGT00390000017317 #34	ENSGT00390000012340
Bos	ANCESTRAL SPECIES	1	ENSGT00970000197500	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328.c	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.e.a #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT01100000263480.a.a.b.a.a.a.b.a.a.a.a.a.b.a.a	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Bos_b	ANCESTRAL SPECIES	15	ENSGT00970000197500	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328.c	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.e.a #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00940000166642	ENSGT00940000179359	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Cow	MODERN SPECIES	10	PIPOX (ENSBTAG00000007946)	MYO18A (ENSBTAG00000017380)	ENSBTAG00000050110	ENSBTAG00000039440	CRYBA1 (ENSBTAG00000005352)	NUFIP2 (ENSBTAG00000033077)	TAOK1 (ENSBTAG00000000827) #11	ENSBTAG00000051640	ABHD15 (ENSBTAG00000025167) #13	TP53I13 (ENSBTAG00000014687) #14	GIT1 (ENSBTAG00000012040) #15	ANKRD13B (ENSBTAG00000001119) #16	CORO6 (ENSBTAG00000001120) #17	SSH2 (ENSBTAG00000011011) #19	EFCAB5 (ENSBTAG00000019122) #21	NSRP1 (ENSBTAG00000019341) #22	SLC6A4 (ENSBTAG00000019349) #23	BLMH (ENSBTAG00000021370) #24	TMIGD1 (ENSBTAG00000002609) #25	CPD (ENSBTAG00000012371) #26	GOSR1 (ENSBTAG00000004961) #27	TRARG1 (ENSBTAG00000019379) #28	BHLHA9 (ENSBTAG00000048216) #29	ABR (ENSBTAG00000008424) #31	TIMM22 (ENSBTAG00000008423) #32	NXN (ENSBTAG00000000855) #33	MRM3 (ENSBTAG00000019162)	GLOD4 (ENSBTAG00000019160)	GEMIN4 (ENSBTAG00000013393) #37	DBIL5 (ENSBTAG00000013395) #35	TLCD3A (ENSBTAG00000046273)
Hybrid Bos Indicus	MODERN SPECIES	10	PIPOX (ENSBIXG00005015768)	MYO18A (ENSBIXG00005002448)	ENSBIXG00005015548	ENSBIXG00005015534	CRYBA1 (ENSBIXG00005015514)	NUFIP2 (ENSBIXG00005002302)	TAOK1 (ENSBIXG00005015460) #11	ENSBIXG00005015431	ABHD15 (ENSBIXG00005002264) #13	TP53I13 (ENSBIXG00005007133) #14	GIT1 (ENSBIXG00005015381) #15	ANKRD13B (ENSBIXG00005015297) #16	CORO6 (ENSBIXG00005015226) #17	SSH2 (ENSBIXG00005005710) #19	EFCAB5 (ENSBIXG00005015080) #21	NSRP1 (ENSBIXG00005005500) #22	SLC6A4 (ENSBIXG00005014973) #23	ENSBIXG00005014932 #24	CPD (ENSBIXG00005014870) #26	GOSR1 (ENSBIXG00005014857) #27	TRARG1 (ENSBIXG00005014825) #28	BHLHA9 (ENSBIXG00005014814) #29	ABR (ENSBIXG00005014752) #31	TIMM22 (ENSBIXG00005001906) #32	ENSBIXG00005014295	ENSBIXG00005014173	ENSBIXG00005014169	GEMIN4 (ENSBIXG00005014144) #37	ENSBIXG00005014110	ENSBIXG00005014099 #35	TLCD3A (ENSBIXG00005014089)
Bos_a	ANCESTRAL SPECIES		ENSGT00940000156995	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328.c	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.e.a #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00940000166642	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Domestic yak	MODERN SPECIES	10	SEZ6 (ENSBGRG00000021995)	PIPOX (ENSBGRG00000021885)	ENSBGRG00000021843	MYO18A (ENSBGRG00000021707)	CRYBA1 (ENSBGRG00000021617)	ENSBGRG00000021505	TAOK1 (ENSBGRG00000021366) #11	ENSBGRG00000021325	ABHD15 (ENSBGRG00000021307) #13	TP53I13 (ENSBGRG00000021269) #14	GIT1 (ENSBGRG00000020265) #15	ANKRD13B (ENSBGRG00000020046) #16	CORO6 (ENSBGRG00000019934) #17	SSH2 (ENSBGRG00000019199) #19	EFCAB5 (ENSBGRG00000018903) #21	NSRP1 (ENSBGRG00000018780) #22	SLC6A4 (ENSBGRG00000018708) #23	BLMH (ENSBGRG00000018518) #24	TMIGD1 (ENSBGRG00000018405) #25	CPD (ENSBGRG00000018296) #26	GOSR1 (ENSBGRG00000017762) #27	TRARG1 (ENSBGRG00000017716) #28	BHLHA9 (ENSBGRG00000017660) #29	ABR (ENSBGRG00000016018) #31	TIMM22 (ENSBGRG00000015916) #32	ENSBGRG00000015885	MRM3 (ENSBGRG00000015811) #34	ENSBGRG00000015788 #35	ENSBGRG00000015145	TLCD3A (ENSBGRG00000014937)	VPS53 (ENSBGRG00000014440)
Wild yak	MODERN SPECIES	137	SEZ6 (ENSBMUG00000008271)	PIPOX (ENSBMUG00000008296)	MYO18A (ENSBMUG00000008559)	ENSBMUG00000008828	CRYBA1 (ENSBMUG00000008839)	NUFIP2 (ENSBMUG00000008858)	TAOK1 (ENSBMUG00000008893) #11	ENSBMUG00000008905	ABHD15 (ENSBMUG00000008911) #13	TP53I13 (ENSBMUG00000008923) #14	GIT1 (ENSBMUG00000008948) #15	ANKRD13B (ENSBMUG00000008970) #16	CORO6 (ENSBMUG00000008987) #17	SSH2 (ENSBMUG00000009028) #19	EFCAB5 (ENSBMUG00000009071) #21	NSRP1 (ENSBMUG00000009094) #22	SLC6A4 (ENSBMUG00000009114) #23	BLMH (ENSBMUG00000009131) #24	TMIGD1 (ENSBMUG00000009157) #25	CPD (ENSBMUG00000009395) #26	GOSR1 (ENSBMUG00000009470) #27	TRARG1 (ENSBMUG00000009491) #28	ABR (ENSBMUG00000009569) #31	TIMM22 (ENSBMUG00000009616) #32	NXN (ENSBMUG00000009627) #33	ENSBMUG00000009641	GLOD4 (ENSBMUG00000009685)	ENSBMUG00000009708 #35	GEMIN4 (ENSBMUG00000009722) #37	TLCD3A (ENSBMUG00000009758)	VPS53 (ENSBMUG00000009808)
American bison	MODERN SPECIES	3331	SEZ6 (ENSBBBG00000019382)	PIPOX (ENSBBBG00000005152)	MYO18A (ENSBBBG00000005397)	ENSBBBG00000008175	CRYBA1 (ENSBBBG00000020034)	NUFIP2 (ENSBBBG00000020045)	TAOK1 (ENSBBBG00000020098) #11	ENSBBBG00000020109	ABHD15 (ENSBBBG00000020130) #13	TP53I13 (ENSBBBG00000005078) #14	GIT1 (ENSBBBG00000005461) #15	ANKRD13B (ENSBBBG00000020256) #16	CORO6 (ENSBBBG00000020275) #17	SSH2 (ENSBBBG00000020311) #19	EFCAB5 (ENSBBBG00000020349) #21	NSRP1 (ENSBBBG00000020382) #22	SLC6A4 (ENSBBBG00000000694) #23	ENSBBBG00000000667 #24	TMIGD1 (ENSBBBG00000000634) #25	CPD (ENSBBBG00000000581) #26	GOSR1 (ENSBBBG00000000528) #27	TRARG1 (ENSBBBG00000000516) #28	BHLHA9 (ENSBBBG00000005522) #29	ABR (ENSBBBG00000020579) #31	TIMM22 (ENSBBBG00000020610) #32	ENSBBBG00000020632	MRM3 (ENSBBBG00000020650) #34	GLOD4 (ENSBBBG00000020675)	ENSBBBG00000020680 #35	GEMIN4 (ENSBBBG00000020708) #37	TLCD3A (ENSBBBG00000020737)
Siberian musk deer	MODERN SPECIES	1135	PHF12 (ENSMMSG00000009230)	SEZ6 (ENSMMSG00000009385)	PIPOX (ENSMMSG00000009655)	MYO18A (ENSMMSG00000009781)	CRYBA1 (ENSMMSG00000010569)	NUFIP2 (ENSMMSG00000010617)	TAOK1 (ENSMMSG00000010695) #11	ABHD15 (ENSMMSG00000010793) #13	ENSMMSG00000010818	TP53I13 (ENSMMSG00000010844) #14	GIT1 (ENSMMSG00000010897) #15	ANKRD13B (ENSMMSG00000011013) #16	CORO6 (ENSMMSG00000011074) #17	SSH2 (ENSMMSG00000011135) #19	EFCAB5 (ENSMMSG00000011284) #21	NSRP1 (ENSMMSG00000011366) #22	SLC6A4 (ENSMMSG00000011425) #23	BLMH (ENSMMSG00000011501) #24	TMIGD1 (ENSMMSG00000011572) #25	CPD (ENSMMSG00000011651) #26	ENSMMSG00000011846	GOSR1 (ENSMMSG00000011872) #27	TRARG1 (ENSMMSG00000011968) #28	BHLHA9 (ENSMMSG00000011981) #29	ABR (ENSMMSG00000012017) #31	ENSMMSG00000012196	TIMM22 (ENSMMSG00000012204) #32	NXN (ENSMMSG00000012221) #33	MRM3 (ENSMMSG00000012262) #34	GLOD4 (ENSMMSG00000012295)	ENSMMSG00000012389 #35
Camelidae	ANCESTRAL SPECIES	46	ENSGT00970000197500	ENSGT00390000011000	ENSGT00650000095071	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00940000164902	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Arabian camel	MODERN SPECIES	7	ENSCDRG00005010914	PIPOX (ENSCDRG00005010866)	ENSCDRG00005010846	MYO18A (ENSCDRG00005010418)	CRYBA1 (ENSCDRG00005010300)	NUFIP2 (ENSCDRG00005010210)	TAOK1 (ENSCDRG00005010067) #11	ENSCDRG00005010030	ABHD15 (ENSCDRG00005010000) #13	TP53I13 (ENSCDRG00005009919) #14	GIT1 (ENSCDRG00005008316) #15	ANKRD13B (ENSCDRG00005008200) #16	CORO6 (ENSCDRG00005008058) #17	SSH2 (ENSCDRG00005007848) #19	EFCAB5 (ENSCDRG00005007788) #21	NSRP1 (ENSCDRG00005015762) #22	SLC6A4 (ENSCDRG00005015697) #23	BLMH (ENSCDRG00005015590) #24	TMIGD1 (ENSCDRG00005015544) #25	CPD (ENSCDRG00005015369) #26	GOSR1 (ENSCDRG00005015232) #27	TRARG1 (ENSCDRG00005015193) #28	BHLHA9 (ENSCDRG00005015178) #29	ABR (ENSCDRG00005014064) #31	TIMM22 (ENSCDRG00005013953) #32	ENSCDRG00005013932	NXN (ENSCDRG00005013864) #33	ENSCDRG00005013826	GLOD4 (ENSCDRG00005013761)	ENSCDRG00005013745 #35	GEMIN4 (ENSCDRG00005013702) #37
Alpaca	MODERN SPECIES	250																NSRP1 (ENSVPAG00000003569) #22	SLC6A4 (ENSVPAG00000003570) #23	BLMH (ENSVPAG00000003571) #24	TMIGD1 (ENSVPAG00000003572) #25	CPD (ENSVPAG00000003573) #26	GOSR1 (ENSVPAG00000003575) #27
Laurasiatheria_b	ANCESTRAL SPECIES	4	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00980000203317	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Laurasiatheria_c	ANCESTRAL SPECIES	3	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00980000203317	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Chiroptera	ANCESTRAL SPECIES	2	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Microchiroptera	ANCESTRAL SPECIES		ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Greater horseshoe bat	MODERN SPECIES	13	PHF12 (ENSRFEG00010015257)	SEZ6 (ENSRFEG00010015051)	ENSRFEG00010014987	PIPOX (ENSRFEG00010014915)	MYO18A (ENSRFEG00010013075)	CRYBA1 (ENSRFEG00010012841)	NUFIP2 (ENSRFEG00010012723)	TAOK1 (ENSRFEG00010012613) #11	ENSRFEG00010012556	ABHD15 (ENSRFEG00010012514) #13	TP53I13 (ENSRFEG00010012467) #14	GIT1 (ENSRFEG00010012309) #15	ANKRD13B (ENSRFEG00010012241) #16	CORO6 (ENSRFEG00010012131) #17	SSH2 (ENSRFEG00010011902) #19	NSRP1 (ENSRFEG00010011791) #22	SLC6A4 (ENSRFEG00010011698) #23	BLMH (ENSRFEG00010011641) #24	TMIGD1 (ENSRFEG00010011558) #25	CPD (ENSRFEG00010011493) #26	TRARG1 (ENSRFEG00010011439) #28	BHLHA9 (ENSRFEG00010011421) #29	ENSRFEG00010011351	ABR (ENSRFEG00010010492) #31	TIMM22 (ENSRFEG00010010355) #32	NXN (ENSRFEG00010010243) #33	MRM3 (ENSRFEG00010010209) #34	GLOD4 (ENSRFEG00010010179)	ENSRFEG00010010160 #35	GEMIN4 (ENSRFEG00010010123) #37	TLCD3A (ENSRFEG00010010054)
Microbat	MODERN SPECIES	1094	FLOT2 (ENSMLUG00000013476)	DHRS13 (ENSMLUG00000013489)	PHF12 (ENSMLUG00000013497)	SEZ6 (ENSMLUG00000013522)	PIPOX (ENSMLUG00000016629)	MYO18A (ENSMLUG00000016634)	CRYBA1 (ENSMLUG00000016676)	NUFIP2 (ENSMLUG00000016685)	TAOK1 (ENSMLUG00000015662) #11	TP53I13 (ENSMLUG00000026730) #14	GIT1 (ENSMLUG00000003040) #15	ANKRD13B (ENSMLUG00000003051) #16	CORO6 (ENSMLUG00000003058) #17	SSH2 (ENSMLUG00000003080) #19	EFCAB5 (ENSMLUG00000003096) #21	NSRP1 (ENSMLUG00000017469) #22	ENSMLUG00000023222 #23	BLMH (ENSMLUG00000002547) #24	TMIGD1 (ENSMLUG00000002557) #25	CPD (ENSMLUG00000002561) #26	GOSR1 (ENSMLUG00000002573) #27	ABR (ENSMLUG00000001514) #31
Megabat	MODERN SPECIES	1694								TAOK1 (ENSPVAG00000009264) #11	ABHD15 (ENSPVAG00000009269) #13	TP53I13 (ENSPVAG00000009270) #14	GIT1 (ENSPVAG00000009272) #15	ANKRD13B (ENSPVAG00000009273) #16	CORO6 (ENSPVAG00000009278) #17	SSH2 (ENSPVAG00000009279) #19	EFCAB5 (ENSPVAG00000009280) #21	NSRP1 (ENSPVAG00000009281) #22	SLC6A4 (ENSPVAG00000009282) #23	BLMH (ENSPVAG00000009283) #24
Equus	ANCESTRAL SPECIES		ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00980000203317	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Horse	MODERN SPECIES	2	SEZ6 (ENSECAG00000017142)	PIPOX (ENSECAG00000020327)	MYO18A (ENSECAG00000020855)	NUFIP2 (ENSECAG00000004975)	CRYBA1 (ENSECAG00000001331)	TAOK1 (ENSECAG00000005213) #11	ABHD15 (ENSECAG00000008862) #13	ENSECAG00000035660	TP53I13 (ENSECAG00000008897) #14	GIT1 (ENSECAG00000008938) #15	ANKRD13B (ENSECAG00000011408) #16	CORO6 (ENSECAG00000013450) #17	SSH2 (ENSECAG00000015172) #19	ENSECAG00000054629	EFCAB5 (ENSECAG00000015313) #21	NSRP1 (ENSECAG00000017076) #22	SLC6A4 (ENSECAG00000017112) #23	BLMH (ENSECAG00000019323) #24	TMIGD1 (ENSECAG00000020217) #25	CPD (ENSECAG00000020432) #26	GOSR1 (ENSECAG00000040193) #27	TRARG1 (ENSECAG00000036408) #28	ABR (ENSECAG00000021889) #31	TIMM22 (ENSECAG00000023897) #32	NXN (ENSECAG00000052299) #33	MRM3 (ENSECAG00000024378) #34	GLOD4 (ENSECAG00000024418)	ENSECAG00000043867 #35	GEMIN4 (ENSECAG00000006339) #37	TLCD3A (ENSECAG00000040301)	VPS53 (ENSECAG00000006437)
Donkey	MODERN SPECIES	4	SEZ6 (ENSEASG00005009840)	PIPOX (ENSEASG00005009825)	MYO18A (ENSEASG00005009812)	CRYBA1 (ENSEASG00005009803)	NUFIP2 (ENSEASG00005009801)	TAOK1 (ENSEASG00005009795) #11	ENSEASG00005009794	ABHD15 (ENSEASG00005009791) #13	TP53I13 (ENSEASG00005009787) #14	GIT1 (ENSEASG00005009780) #15	ANKRD13B (ENSEASG00005009771) #16	CORO6 (ENSEASG00005009737) #17	SSH2 (ENSEASG00005009704) #19	ENSEASG00005029796	EFCAB5 (ENSEASG00005009696) #21	NSRP1 (ENSEASG00005009692) #22	SLC6A4 (ENSEASG00005009690) #23	BLMH (ENSEASG00005009687) #24	TMIGD1 (ENSEASG00005009685) #25	CPD (ENSEASG00005009681) #26	ENSEASG00005009671 #27	ENSEASG00005009668 #28	BHLHA9 (ENSEASG00005009665) #29	ABR (ENSEASG00005009655) #31	TIMM22 (ENSEASG00005034936) #32	NXN (ENSEASG00005009649) #33	MRM3 (ENSEASG00005009647) #34	ENSEASG00005033869	ENSEASG00005009643 #35	TLCD3A (ENSEASG00005009639)	GEMIN4 (ENSEASG00005009640) #37
Carnivora	ANCESTRAL SPECIES	9	ENSGT00950000185134	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Felidae	ANCESTRAL SPECIES	8	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Panthera	ANCESTRAL SPECIES	14	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Panthera_a	ANCESTRAL SPECIES	13	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
leopard	MODERN SPECIES	126							TAOK1 (ENSPPRG00000009840) #11	ABHD15 (ENSPPRG00000010264) #13	ENSPPRG00000010489 #12	TP53I13 (ENSPPRG00000010905) #14	GIT1 (ENSPPRG00000017907) #15	ANKRD13B (ENSPPRG00000019996) #16	CORO6 (ENSPPRG00000024593) #17	SSH2 (ENSPPRG00000024245) #19	EFCAB5 (ENSPPRG00000023606) #21	NSRP1 (ENSPPRG00000022797) #22	SLC6A4 (ENSPPRG00000000489) #23	BLMH (ENSPPRG00000000660) #24	TMIGD1 (ENSPPRG00000001411) #25	CPD (ENSPPRG00000002987) #26	GOSR1 (ENSPPRG00000004087) #27	ENSPPRG00000004356 #28	ENSPPRG00000004572 #28	BHLHA9 (ENSPPRG00000014962) #29	ABR (ENSPPRG00000006242) #31	TIMM22 (ENSPPRG00000006933) #32	NXN (ENSPPRG00000007982) #33	MRM3 (ENSPPRG00000008082) #34	GLOD4 (ENSPPRG00000008216)	ENSPPRG00000015342 #35	GEMIN4 (ENSPPRG00000009427) #37
lion	MODERN SPECIES	14	PHF12 (ENSPLOG00000008432)	SEZ6 (ENSPLOG00000008160)	PIPOX (ENSPLOG00000008088)	MYO18A (ENSPLOG00000007368)	CRYBA1 (ENSPLOG00000006983)	NUFIP2 (ENSPLOG00000006955)	TAOK1 (ENSPLOG00000006874) #11	ENSPLOG00000006837 #12	ABHD15 (ENSPLOG00000006815) #13	TP53I13 (ENSPLOG00000006795) #14	GIT1 (ENSPLOG00000006717) #15	ANKRD13B (ENSPLOG00000006643) #16	CORO6 (ENSPLOG00000006590) #17	SSH2 (ENSPLOG00000006296) #19	EFCAB5 (ENSPLOG00000006173) #21	NSRP1 (ENSPLOG00000006120) #22	SLC6A4 (ENSPLOG00000006083) #23	BLMH (ENSPLOG00000005938) #24	TMIGD1 (ENSPLOG00000005865) #25	CPD (ENSPLOG00000005766) #26	GOSR1 (ENSPLOG00000005707) #27	TRARG1 (ENSPLOG00000017557) #28	BHLHA9 (ENSPLOG00000017538) #29	ABR (ENSPLOG00000017043) #31	TIMM22 (ENSPLOG00000016935) #32	NXN (ENSPLOG00000016849) #33	MRM3 (ENSPLOG00000016790) #34	ENSPLOG00000016763 #35	GLOD4 (ENSPLOG00000016643)	GEMIN4 (ENSPLOG00000016732) #37	TLCD3A (ENSPLOG00000016553)
Tiger	MODERN SPECIES	76	PHF12 (ENSPTIG00000016400)	SEZ6 (ENSPTIG00000017956)	PIPOX (ENSPTIG00000020446)	MYO18A (ENSPTIG00000021221)	CRYBA1 (ENSPTIG00000015671)	NUFIP2 (ENSPTIG00000017161)	TAOK1 (ENSPTIG00000017804) #11	ABHD15 (ENSPTIG00000020398) #13	ENSPTIG00000005356 #12	TP53I13 (ENSPTIG00000020772) #14	GIT1 (ENSPTIG00000021164) #15	ANKRD13B (ENSPTIG00000001936) #16	CORO6 (ENSPTIG00000005742) #17	SSH2 (ENSPTIG00000009150) #19	EFCAB5 (ENSPTIG00000011287) #21	NSRP1 (ENSPTIG00000012822) #22	SLC6A4 (ENSPTIG00000013217) #23	BLMH (ENSPTIG00000013540) #24	TMIGD1 (ENSPTIG00000014964) #25	CPD (ENSPTIG00000015876) #26	GOSR1 (ENSPTIG00000018140) #27	TRARG1 (ENSPTIG00000018746) #28	ABR (ENSPTIG00000019521) #31	TIMM22 (ENSPTIG00000021025) #32	NXN (ENSPTIG00000021071) #33	MRM3 (ENSPTIG00000021325) #34	GLOD4 (ENSPTIG00000021516)	ENSPTIG00000005542 #35	GEMIN4 (ENSPTIG00000021725) #37	TLCD3A (ENSPTIG00000002065)	VPS53 (ENSPTIG00000004825)
Cat	MODERN SPECIES	245	SEZ6 (ENSFCAG00000007044)	PIPOX (ENSFCAG00000007046)	MYO18A (ENSFCAG00000007047)	CRYBA1 (ENSFCAG00000012488)	NUFIP2 (ENSFCAG00000007193)	TAOK1 (ENSFCAG00000002755) #11	ENSFCAG00000041197 #12	ABHD15 (ENSFCAG00000002756) #13	TP53I13 (ENSFCAG00000002757) #14	GIT1 (ENSFCAG00000002758) #15	ANKRD13B (ENSFCAG00000002759) #16	CORO6 (ENSFCAG00000002760) #17	SSH2 (ENSFCAG00000002761) #19	ENSFCAG00000044178	EFCAB5 (ENSFCAG00000004649) #21	NSRP1 (ENSFCAG00000039697) #22	ENSFCAG00000047323	SLC6A4 (ENSFCAG00000005906) #23	BLMH (ENSFCAG00000004048) #24	TMIGD1 (ENSFCAG00000004055) #25	CPD (ENSFCAG00000018141) #26	GOSR1 (ENSFCAG00000038879) #27	TRARG1 (ENSFCAG00000036885) #28	BHLHA9 (ENSFCAG00000028437) #29	ABR (ENSFCAG00000012073) #31	TIMM22 (ENSFCAG00000046439) #32	NXN (ENSFCAG00000001674) #33	MRM3 (ENSFCAG00000001673) #34	GLOD4 (ENSFCAG00000037165)	ENSFCAG00000001672 #35	GEMIN4 (ENSFCAG00000024115) #37
Caniformia	ANCESTRAL SPECIES	6	ENSGT00950000185134	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00520000059663 #12	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Caniformia_b	ANCESTRAL SPECIES	21	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Ursidae	ANCESTRAL SPECIES	18	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.d #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Ursus	ANCESTRAL SPECIES	8	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000004856.w.a.a.b.b.a.b.b.a	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735.d #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT01030000235164	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b	ENSGT00390000015165
Polar bear	MODERN SPECIES	192	ENSUMAG00000011601	ENSUMAG00000011565	SEZ6 (ENSUMAG00000011502)	ENSUMAG00000011495	PIPOX (ENSUMAG00000011486)	MYO18A (ENSUMAG00000010883)	CRYBA1 (ENSUMAG00000010754)	NUFIP2 (ENSUMAG00000010751)	TAOK1 (ENSUMAG00000010737) #11	ENSUMAG00000010733	TP53I13 (ENSUMAG00000010725) #14	GIT1 (ENSUMAG00000010716) #15	ANKRD13B (ENSUMAG00000010709) #16	CORO6 (ENSUMAG00000010699) #17	SSH2 (ENSUMAG00000010617) #19	NSRP1 (ENSUMAG00000010579) #22	SLC6A4 (ENSUMAG00000010528) #23	BLMH (ENSUMAG00000010500) #24	TMIGD1 (ENSUMAG00000010487) #25	CPD (ENSUMAG00000010162) #26	GOSR1 (ENSUMAG00000010099) #27	ENSUMAG00000010090 #28	ENSUMAG00000010074	ABR (ENSUMAG00000010065) #31	TIMM22 (ENSUMAG00000010061) #32	ENSUMAG00000010058	MRM3 (ENSUMAG00000010052) #34	GLOD4 (ENSUMAG00000010051)	ENSUMAG00000010049 #35	GEMIN4 (ENSUMAG00000010047) #37	TLCD3A (ENSUMAG00000010044)
American black bear	MODERN SPECIES	5552																NSRP1 (ENSUAMG00000019522) #22	SLC6A4 (ENSUAMG00000019521) #23	ENSUAMG00000019490 #24
Giant Panda	MODERN SPECIES	4	DHRS13 (ENSAMEG00000004532)	PHF12 (ENSAMEG00000004496)	SEZ6 (ENSAMEG00000004437)	PIPOX (ENSAMEG00000004416)	MYO18A (ENSAMEG00000004356)	CRYBA1 (ENSAMEG00000004336)	NUFIP2 (ENSAMEG00000004332)	TAOK1 (ENSAMEG00000004283) #11	ABHD15 (ENSAMEG00000004278) #13	TP53I13 (ENSAMEG00000004273) #14	ANKRD13B (ENSAMEG00000004129) #16	ENSAMEG00000004182 #15	CORO6 (ENSAMEG00000004085) #17	SSH2 (ENSAMEG00000004063) #19	EFCAB5 (ENSAMEG00000004039) #21	NSRP1 (ENSAMEG00000004028) #22	SLC6A4 (ENSAMEG00000003959) #23	BLMH (ENSAMEG00000003935) #24	TMIGD1 (ENSAMEG00000003930) #25	CPD (ENSAMEG00000003881) #26	ENSAMEG00000003847 #27	ENSAMEG00000029250	ENSAMEG00000029976 #28	ABR (ENSAMEG00000003747) #31	TIMM22 (ENSAMEG00000003729) #32	NXN (ENSAMEG00000003723) #33	MRM3 (ENSAMEG00000008346) #34	GLOD4 (ENSAMEG00000008317)	ENSAMEG00000018475 #35	GEMIN4 (ENSAMEG00000018474) #37	TLCD3A (ENSAMEG00000025727)
Mustelinae	ANCESTRAL SPECIES	2	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT01030000235034	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
American mink	MODERN SPECIES	323																NSRP1 (ENSNVIG00000005211) #22	SLC6A4 (ENSNVIG00000005376) #23	BLMH (ENSNVIG00000005581) #24	TMIGD1 (ENSNVIG00000005661) #25	CPD (ENSNVIG00000005767) #26	GOSR1 (ENSNVIG00000005904) #27	TRARG1 (ENSNVIG00000006043) #28	BHLHA9 (ENSNVIG00000006103) #29	ABR (ENSNVIG00000006259) #31	TIMM22 (ENSNVIG00000006993) #32	NXN (ENSNVIG00000007059) #33	MRM3 (ENSNVIG00000007166) #34	E7EMY5 (ENSNVIG00000007210)	ACBP (ENSNVIG00000007277) #35	GEMIN4 (ENSNVIG00000007293) #37	TLCD3A (ENSNVIG00000007328)
Ferret	MODERN SPECIES	181	FLOT2 (ENSMPUG00000014136)	PHF12 (ENSMPUG00000014128)	SEZ6 (ENSMPUG00000014118)	PIPOX (ENSMPUG00000014109)	MYO18A (ENSMPUG00000014095)	CRYBA1 (ENSMPUG00000014019)	NUFIP2 (ENSMPUG00000014002)	TAOK1 (ENSMPUG00000013996) #11	ABHD15 (ENSMPUG00000019509) #13	TP53I13 (ENSMPUG00000013979) #14	GIT1 (ENSMPUG00000013970) #15	ANKRD13B (ENSMPUG00000013896) #16	CORO6 (ENSMPUG00000013893) #17	SSH2 (ENSMPUG00000013890) #19	EFCAB5 (ENSMPUG00000013881) #21	NSRP1 (ENSMPUG00000013859) #22	SLC6A4 (ENSMPUG00000013854) #23	BLMH (ENSMPUG00000013852) #24	TMIGD1 (ENSMPUG00000013845) #25	CPD (ENSMPUG00000013836) #26	ENSMPUG00000013815 #27	TRARG1 (ENSMPUG00000013812) #28	ABR (ENSMPUG00000013803) #31	TIMM22 (ENSMPUG00000013800) #32	NXN (ENSMPUG00000013796) #33	MRM3 (ENSMPUG00000013793) #34	GLOD4 (ENSMPUG00000013761)	ENSMPUG00000019504 #35	GEMIN4 (ENSMPUG00000013757) #37	TLCD3A (ENSMPUG00000013751)	VPS53 (ENSMPUG00000013746)
Canidae	ANCESTRAL SPECIES	2	ENSGT00390000011000	ENSGT00950000185134.b	ENSGT00940000155768.B	ENSGT00940000176334	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000165363	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Canis_lupus	ANCESTRAL SPECIES	3	ENSGT00390000011000	ENSGT00950000185134.b	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00520000059663 #12	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00950000183010.a.a.a.b.b	ENSGT00940000160691.m	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000165363	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37
Dingo	MODERN SPECIES	327	ENSCAFG00020011660	MYO18A (ENSCAFG00020011619)	CRYBA1 (ENSCAFG00020011603)	NUFIP2 (ENSCAFG00020011598)	TAOK1 (ENSCAFG00020011508) #11	ENSCAFG00020011495 #12	ABHD15 (ENSCAFG00020011490) #13	TP53I13 (ENSCAFG00020011480) #14	GIT1 (ENSCAFG00020011475) #15	ANKRD13B (ENSCAFG00020011466) #16	CORO6 (ENSCAFG00020011415) #17	SSH2 (ENSCAFG00020011357) #19	ENSCAFG00020011340	ENSCAFG00020011339	ENSCAFG00020011323	NSRP1 (ENSCAFG00020011309) #22	SLC6A4 (ENSCAFG00020011289) #23	BLMH (ENSCAFG00020011283) #24	TMIGD1 (ENSCAFG00020011282) #25	CPD (ENSCAFG00020011093) #26	GOSR1 (ENSCAFG00020011061) #27	BHLHA9 (ENSCAFG00020011059) #29	ABR (ENSCAFG00020011015) #31	TIMM22 (ENSCAFG00020011001) #32	ENSCAFG00020010994	NXN (ENSCAFG00020010982) #33	MRM3 (ENSCAFG00020010972) #34	GLOD4 (ENSCAFG00020010966)	ENSCAFG00020010963 #35	GEMIN4 (ENSCAFG00020010957) #37	ENSCAFG00020010950
Dog	MODERN SPECIES	37	ENSCAFG00845009786	MYO18A (ENSCAFG00845010063)	NUFIP2 (ENSCAFG00845010911)	CRYBA1 (ENSCAFG00845011001)	TAOK1 (ENSCAFG00845011111) #11	ABHD15 (ENSCAFG00845011269) #13	ENSCAFG00845011314 #12	TP53I13 (ENSCAFG00845011354) #14	GIT1 (ENSCAFG00845011450) #15	ANKRD13B (ENSCAFG00845011563) #16	CORO6 (ENSCAFG00845011653) #17	SSH2 (ENSCAFG00845011817) #19	ENSCAFG00845012020	EFCAB5 (ENSCAFG00845012075) #21	ENSCAFG00845012188	NSRP1 (ENSCAFG00845012253) #22	SLC6A4 (ENSCAFG00845012358) #23	BLMH (ENSCAFG00845012487) #24	TMIGD1 (ENSCAFG00845012606) #25	CPD (ENSCAFG00845012753) #26	GOSR1 (ENSCAFG00845012980) #27	ENSCAFG00845013053 #28	ABR (ENSCAFG00845013244) #31	TIMM22 (ENSCAFG00845013556) #32	ENSCAFG00845013589	MRM3 (ENSCAFG00845013626) #34	GLOD4 (ENSCAFG00845013647)	ENSCAFG00845013664 #35	GEMIN4 (ENSCAFG00845013677) #37	TLCD3A (ENSCAFG00845013713)	VPS53 (ENSCAFG00845013795)
Red fox	DUPLICATION
Red fox	MODERN SPECIES		INA (ENSVVUG00000004387)	PCGF6 (ENSVVUG00000004391)	TAF5 (ENSVVUG00000004406)	ATP5MD (ENSVVUG00000004442)	PDCD11 (ENSVVUG00000004457)	CALHM2 (ENSVVUG00000004502)	CALHM1 (ENSVVUG00000004508)	CALHM3 (ENSVVUG00000004548)	NEURL1 (ENSVVUG00000004550)	SH3PXD2A (ENSVVUG00000004587)	ENSVVUG00000004636	SLK (ENSVVUG00000004650)	COL17A1 (ENSVVUG00000004707)	SFR1 (ENSVVUG00000004758)	CFAP43 (ENSVVUG00000004764)	ENSVVUG00000004792 #22	GSTO1 (ENSVVUG00000004800)	GSTO2 (ENSVVUG00000004830)	ITPRIP (ENSVVUG00000004832)	CFAP58 (ENSVVUG00000004840)	SORCS3 (ENSVVUG00000004978)	SORCS1 (ENSVVUG00000005689)	ENSVVUG00000007668	XPNPEP1 (ENSVVUG00000007706)	ADD3 (ENSVVUG00000007769)	MXI1 (ENSVVUG00000007806)	SMNDC1 (ENSVVUG00000007820)	DUSP5 (ENSVVUG00000007834)	SMC3 (ENSVVUG00000007846)	RBM20 (ENSVVUG00000007885)	PDCD4 (ENSVVUG00000007900)
Red fox	MODERN SPECIES	121	PIPOX (ENSVVUG00000020084)	ENSVVUG00000020086	MYO18A (ENSVVUG00000020187)	ENSVVUG00000020994	CRYBA1 (ENSVVUG00000020995)	NUFIP2 (ENSVVUG00000020998)	ENSVVUG00000020999	TAOK1 (ENSVVUG00000021005) #11	ABHD15 (ENSVVUG00000021021) #13	TP53I13 (ENSVVUG00000021027) #14	GIT1 (ENSVVUG00000021029) #15	ANKRD13B (ENSVVUG00000021046) #16	CORO6 (ENSVVUG00000021059) #17	SSH2 (ENSVVUG00000021111) #19	EFCAB5 (ENSVVUG00000021129) #21	NSRP1 (ENSVVUG00000021161) #22	SLC6A4 (ENSVVUG00000021175) #23	BLMH (ENSVVUG00000021301) #24	TMIGD1 (ENSVVUG00000021306) #25	CPD (ENSVVUG00000021310) #26	GOSR1 (ENSVVUG00000021333) #27	TRARG1 (ENSVVUG00000021586) #28	ABR (ENSVVUG00000021589) #31	TIMM22 (ENSVVUG00000021599) #32	ENSVVUG00000021600	NXN (ENSVVUG00000021602) #33	MRM3 (ENSVVUG00000021603)	GLOD4 (ENSVVUG00000021606)	ENSVVUG00000021610 #35	GEMIN4 (ENSVVUG00000021612) #37	TLCD3A (ENSVVUG00000021613)
Atlantogenata	ANCESTRAL SPECIES	1	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Xenarthra	ANCESTRAL SPECIES	21															ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Armadillo	DUPLICATION
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	1940		STARD3NL (ENSDNOG00000038831)	ENSDNOG00000034766	ENSDNOG00000035272	ENSDNOG00000042139	ENSDNOG00000039203	ENSDNOG00000048520	ENSDNOG00000037765	ENSDNOG00000046288	ENSDNOG00000040802	ENSDNOG00000039050	ENSDNOG00000036062	TRGV9 (ENSDNOG00000041787)	ENSDNOG00000048888	ENSDNOG00000038855	ENSDNOG00000014737 #22	ENSDNOG00000048786	ENSDNOG00000038588	ENSDNOG00000039893	ENSDNOG00000046537	ENSDNOG00000036487	ENSDNOG00000036977	AMPH (ENSDNOG00000045883)	ENSDNOG00000006684	ENSDNOG00000038365	ENSDNOG00000046137	POU6F2 (ENSDNOG00000008057)	ENSDNOG00000036702	ENSDNOG00000047994	YAE1 (ENSDNOG00000047546)	RALA (ENSDNOG00000046497)
Armadillo	MODERN SPECIES	4634															EFCAB5 (ENSDNOG00000002835) #21	ENSDNOG00000047758 #22	SLC6A4 (ENSDNOG00000001931) #23	BLMH (ENSDNOG00000001075) #24	TMIGD1 (ENSDNOG00000001077) #25	CPD (ENSDNOG00000019638) #26	GOSR1 (ENSDNOG00000044244) #27	TRARG1 (ENSDNOG00000045520) #28	BHLHA9 (ENSDNOG00000024451) #29	ABR (ENSDNOG00000002018) #31	TIMM22 (ENSDNOG00000038033) #32	NXN (ENSDNOG00000004297) #33	MRM3 (ENSDNOG00000004294) #34	GLOD4 (ENSDNOG00000040540)	ENSDNOG00000004279 #35	GEMIN4 (ENSDNOG00000048322) #37	TLCD3A (ENSDNOG00000044974)
Armadillo	MODERN SPECIES	4020													LMO7 (ENSDNOG00000007458)	UCHL3 (ENSDNOG00000044332)	COMMD6 (ENSDNOG00000038642)	ENSDNOG00000046565 #22	TBC1D4 (ENSDNOG00000008702)	KLF12 (ENSDNOG00000004888)
Sloth	MODERN SPECIES	2199																ENSCHOG00000009060 #22
Afrotheria	ANCESTRAL SPECIES	60	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Afrotheria_a	ANCESTRAL SPECIES	55	ENSGT00940000155599	ENSGT00940000155713	ENSGT00940000156995	ENSGT00390000011000	ENSGT00940000155768.B	ENSGT00940000159685	ENSGT00440000038328	ENSGT00940000155796 #11	ENSGT00950000182902.b.b.a #13	ENSGT00390000008202 #14	ENSGT00940000159604 #15	ENSGT00950000182928.A.a.a #16	ENSGT00940000159328 #17	ENSGT00940000157430 #19	ENSGT00940000154049.b #21	ENSGT00940000154049.a #22	ENSGT00940000157855 #23	ENSGT00390000001735 #24	ENSGT00510000048311 #25	ENSGT00940000156919 #26	ENSGT00390000008688 #27	ENSGT00940000160337 #28	ENSGT00390000002453 #29	ENSGT00940000153491.b.b.a #31	ENSGT00390000016067 #32	ENSGT00940000161894 #33	ENSGT00390000017317 #34	ENSGT00390000012340	ENSGT00940000163490 #35	ENSGT00390000012296 #37	ENSGT01010000222313.A.b.b.b
Elephant	MODERN SPECIES	414	DHRS13 (ENSLAFG00000026315)	PHF12 (ENSLAFG00000013848)	SEZ6 (ENSLAFG00000013857)	PIPOX (ENSLAFG00000013866)	MYO18A (ENSLAFG00000013871)	CRYBA1 (ENSLAFG00000012297)	NUFIP2 (ENSLAFG00000012294)	TAOK1 (ENSLAFG00000001802) #11	ABHD15 (ENSLAFG00000012432) #13	TP53I13 (ENSLAFG00000029301) #14	GIT1 (ENSLAFG00000004980) #15	ANKRD13B (ENSLAFG00000004984) #16	CORO6 (ENSLAFG00000004988) #17	SSH2 (ENSLAFG00000004996) #19	EFCAB5 (ENSLAFG00000020543) #21	NSRP1 (ENSLAFG00000013731) #22	SLC6A4 (ENSLAFG00000012156) #23	BLMH (ENSLAFG00000003205) #24	TMIGD1 (ENSLAFG00000008787) #25	CPD (ENSLAFG00000002399) #26	GOSR1 (ENSLAFG00000002402) #27	TRARG1 (ENSLAFG00000020853) #28	BHLHA9 (ENSLAFG00000011249) #29	ABR (ENSLAFG00000002668) #31	ENSLAFG00000009675	NXN (ENSLAFG00000016660) #33	MRM3 (ENSLAFG00000016652) #34	GLOD4 (ENSLAFG00000016643)	ENSLAFG00000017570 #35	GEMIN4 (ENSLAFG00000017567) #37	TLCD3A (ENSLAFG00000017562)
Hyrax	MODERN SPECIES	1986																NSRP1 (ENSPCAG00000000515) #22
Tenrec	MODERN SPECIES	6947																NSRP1 (ENSETEG00000015217) #22