Percora_a	ANCESTRAL SPECIES	11	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.a #10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00500000045852	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT01010000223738	ENSGT00940000163221 #20	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.e ##25	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557 #29	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a	ENSGT00940000154067.d #33	ENSGT00940000158974 #34	ENSGT00940000154365.a.a #35
Bovidae	ANCESTRAL SPECIES	12	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.a #10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00500000045852	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT01010000223738	ENSGT00940000163221 #20	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.e ##25	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557 #29	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a	ENSGT00940000154067.d #33	ENSGT00940000158974 #34	ENSGT00940000154365.a.a #35
Bovinae	ANCESTRAL SPECIES	8	ENSGT00390000003759	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.a #10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00500000045852	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00390000009113.a.a.k.b.c #17	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT01010000223738	ENSGT00940000163221 #20	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.e ##25	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557 #29	ENSGT00940000174020.b	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a.a	ENSGT00940000154067.d #33	ENSGT00940000158974 #34
Bos	ANCESTRAL SPECIES	8	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.a #10	ENSGT00940000161119.e.b ##10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00500000045852	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00390000009113.a.a.k.b.c #17	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT01010000223738	ENSGT00940000163221 #20	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557.f ##29	ENSGT00940000174020.b	ENSGT00390000010557.e #29	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a.a	ENSGT00940000154067.d #33	ENSGT00940000158974 #34
Bos_a	ANCESTRAL SPECIES	37	ENSGT00940000160059.a.a	ENSGT00940000153458.A	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.a #10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00390000009113.a.a.k.b.c #17	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557.f ##29	ENSGT00390000010557.e #29	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a.a	ENSGT00940000154067.d #33	ENSGT00940000158974 #34	ENSGT00940000154365.a.a #35
Domestic yak	MODERN SPECIES	23	SHH (ENSBGRG00000011761) #7	RBM33 (ENSBGRG00000011152) #8	ENSBGRG00000011077 #9	ENSBGRG00000010955 #10	EN2 (ENSBGRG00000010916) #11	INSIG1 (ENSBGRG00000010766) #12	ENSBGRG00000010638 #13	PAXIP1 (ENSBGRG00000010084) #14	ENSBGRG00000010048 #15	DPP6 (ENSBGRG00000008941) #16	ENSBGRG00000008866 #17	ENSBGRG00000008613 #18	XRCC2 (ENSBGRG00000008528) #19	CCT8L2 (ENSBGRG00000008514) #20	ENSBGRG00000008491 #21	KMT2C (ENSBGRG00000008413) #22	GALNT11 (ENSBGRG00000008338) #23	GALNTL5 (ENSBGRG00000008195) #24	PRKAG2 (ENSBGRG00000007895) #25	RHEB (ENSBGRG00000007747) #26	CRYGN (ENSBGRG00000007698) #27	WDR86 (ENSBGRG00000007613) #28	NUB1 (ENSBGRG00000007414) #29	SMARCD3 (ENSBGRG00000006961) #30	CHPF2 (ENSBGRG00000006836) #31	ABCF2 (ENSBGRG00000006782) #32	IQCA1L (ENSBGRG00000006649) #33	ASB10 (ENSBGRG00000006572) #34	GBX1 (ENSBGRG00000006543) #35	ENSBGRG00000006498 #36	ENSBGRG00000006360 #37
Wild yak	MODERN SPECIES	2098														ENSBMUG00000005932 #18	XRCC2 (ENSBMUG00000005898) #19	KMT2C (ENSBMUG00000005798) #22	GALNT11 (ENSBMUG00000005577) #23	GALNTL5 (ENSBMUG00000005511) #24
Bos_b	ANCESTRAL SPECIES	7	ENSGT00390000003759	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.b ##10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00500000045852	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00390000009113.a.a.k.b.c #17	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT01010000223738	ENSGT00940000163221 #20	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557.f ##29	ENSGT00940000174020.b	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a.a.b	ENSGT00940000154067.d #33	ENSGT00940000158974 #34	ENSGT00940000154365.a.a #35
Hybrid Bos Indicus	MODERN SPECIES	23	LMBR1 (ENSBIXG00005016491)	RNF32 (ENSBIXG00005016410)	SHH (ENSBIXG00005016323) #7	RBM33 (ENSBIXG00005006571) #8	ENSBIXG00005016227 ##10	EN2 (ENSBIXG00005016206) #11	INSIG1 (ENSBIXG00005016175) #12	HTR5A (ENSBIXG00005016107) #13	ENSBIXG00005016093	PAXIP1 (ENSBIXG00005016085) #14	DPP6 (ENSBIXG00005016005) #16	ENSBIXG00005015650 #17	ENSBIXG00005002349 #18	XRCC2 (ENSBIXG00005015470) #19	CCT8L2 (ENSBIXG00005007318) #20	KMT2C (ENSBIXG00005015371) #22	GALNT11 (ENSBIXG00005015098) #23	GALNTL5 (ENSBIXG00005015014) #24	PRKAG2 (ENSBIXG00005006133) #25	RHEB (ENSBIXG00005014716) #26	CRYGN (ENSBIXG00005014677) #27	WDR86 (ENSBIXG00005002048) #28	NUB1 (ENSBIXG00005014623) ##29	ENSBIXG00005014608	SMARCD3 (ENSBIXG00005002031) #30	CHPF2 (ENSBIXG00005014539) #31	ENSBIXG00005014498	ABCF2 (ENSBIXG00005014490) #32	ENSBIXG00005014463	IQCA1L (ENSBIXG00005005975) #33	ASB10 (ENSBIXG00005014395) #34
Cow	MODERN SPECIES	23	LMBR1 (ENSBTAG00000030817)	RNF32 (ENSBTAG00000020335)	SHH (ENSBTAG00000024552) #7	RBM33 (ENSBTAG00000010243) #8	CNPY1 (ENSBTAG00000000397) ##10	EN2 (ENSBTAG00000018917) #11	INSIG1 (ENSBTAG00000001592) #12	HTR5A (ENSBTAG00000002891) #13	PAXIP1 (ENSBTAG00000017505) #14	DPP6 (ENSBTAG00000021941) #16	ENSBTAG00000009002 #17	ACTR3B (ENSBTAG00000008032) #18	XRCC2 (ENSBTAG00000030897) #19	ENSBTAG00000019597	CCT8L2 (ENSBTAG00000014871) #20	KMT2C (ENSBTAG00000024199) #22	GALNT11 (ENSBTAG00000021260) #23	GALNTL5 (ENSBTAG00000045535) #24	PRKAG2 (ENSBTAG00000002917) #25	RHEB (ENSBTAG00000031861) #26	CRYGN (ENSBTAG00000003019) #27	WDR86 (ENSBTAG00000006232) #28	NUB1 (ENSBTAG00000004540) ##29	ENSBTAG00000048514	SMARCD3 (ENSBTAG00000014372) #30	CHPF2 (ENSBTAG00000014371) #31	ABCF2 (ENSBTAG00000000607) #32	H2BK1 (ENSBTAG00000024204)	IQCA1L (ENSBTAG00000018838) #33	GBX1 (ENSBTAG00000011120) #35	ASB10 (ENSBTAG00000016752) #34
American bison	MODERN SPECIES	3293			OR6A2 (ENSBBBG00000003428)	ENSBBBG00000003434	ENSBBBG00000003437	ENSBBBG00000003441	ENSBBBG00000003453	ENSBBBG00000003463	OR10A4 (ENSBBBG00000003466)	OR2D2 (ENSBBBG00000003468)	OR2D3 (ENSBBBG00000003472)	ZNF215 (ENSBBBG00000003898)	ENSBBBG00000015597 #17	ENSBBBG00000006993 #18	XRCC2 (ENSBBBG00000003877) #19	KMT2C (ENSBBBG00000015535) #22	GALNT11 (ENSBBBG00000015426) #23	GALNTL5 (ENSBBBG00000002728) #24	ENSBBBG00000015385 ##25	PRKAG2 (ENSBBBG00000001246) #25	ENSBBBG00000015362 #26	CRYGN (ENSBBBG00000015352) #27	WDR86 (ENSBBBG00000003820) #28	NUB1 (ENSBBBG00000015340) #29	ENSBBBG00000015320	SMARCD3 (ENSBBBG00000001258) #30	CHPF2 (ENSBBBG00000001310) #31	ABCF2 (ENSBBBG00000001327) #32	ENSBBBG00000001354	IQCA1L (ENSBBBG00000001363) #33	ASB10 (ENSBBBG00000001385) #34
Caprinae	ANCESTRAL SPECIES	47	ENSGT00940000160059.a.a	ENSGT00940000153458.A	ENSGT00390000007809.b	ENSGT00390000003759	ENSGT00940000159119.b #7	ENSGT00530000063891 #8	ENSGT00940000161119.e.a #10	ENSGT00940000159935 #11	ENSGT00580000081600.c.a #12	ENSGT01010000222287.B.a.b.a #13	ENSGT00940000155757 #14	ENSGT00940000156280 #16	ENSGT00940000158304 #18	ENSGT00390000020445 #19	ENSGT00940000163221 #20	ENSGT00940000155281 #22	ENSGT00940000158227 #23	ENSGT00940000162156 #24	ENSGT00950000183019.f.a #25	ENSGT00940000159945 #26	ENSGT00940000159301 #27	ENSGT00940000161049 #28	ENSGT00390000010557 #29	ENSGT00940000158945 #30	ENSGT01050000244857.B.a #31	ENSGT00630000089910 #32	ENSGT01100000263569.a.a	ENSGT00940000154067.d #33	ENSGT00940000158974 #34	ENSGT00940000154365.a.a #35	ENSGT00940000159586 #36
Rambouillet Sheep	MODERN SPECIES	20	UBE3C (ENSOARG00020022536)	MNX1 (ENSOARG00020022488)	LMBR1 (ENSOARG00020022336)	RNF32 (ENSOARG00020022205)	SHH (ENSOARG00020022160) #7	ENSOARG00020022139 #8	ENSOARG00020022000 #8	ENSOARG00020021953 #10	EN2 (ENSOARG00020021934) #11	INSIG1 (ENSOARG00020021923) #12	HTR5A (ENSOARG00020021673) #13	PAXIP1 (ENSOARG00020020495) #14	DPP6 (ENSOARG00020018767) #16	ENSOARG00020018455 #18	XRCC2 (ENSOARG00020018428) #19	KMT2C (ENSOARG00020017517) #22	GALNT11 (ENSOARG00020017410) #23	GALNTL5 (ENSOARG00020017347) #24	PRKAG2 (ENSOARG00020016773) #25	RHEB (ENSOARG00020016712) #26	CRYGN (ENSOARG00020016653) #27	WDR86 (ENSOARG00020016555) #28	NUB1 (ENSOARG00020016427) #29	SMARCD3 (ENSOARG00020016209) #30	ABCF2 (ENSOARG00020016106) #32	H2BK1 (ENSOARG00020016084)	IQCA1L (ENSOARG00020015938) #33	ASB10 (ENSOARG00020015699) #34	CHPF2 (ENSOARG00020015638) #31	GBX1 (ENSOARG00020015604) #35	AGAP3 (ENSOARG00020015226) #36
Goat	MODERN SPECIES	23	NOM1 (ENSCHIG00000020102)	LMBR1 (ENSCHIG00000014826)	RNF32 (ENSCHIG00000019658)	SHH (ENSCHIG00000023555) #7	RBM33 (ENSCHIG00000012513) #8	ENSCHIG00000011221 #10	EN2 (ENSCHIG00000017008) #11	INSIG1 (ENSCHIG00000023323) #12	HTR5A (ENSCHIG00000011892) #13	PAXIP1 (ENSCHIG00000020313) #14	DPP6 (ENSCHIG00000006632) #16	ENSCHIG00000019499	ENSCHIG00000026843 #18	XRCC2 (ENSCHIG00000024225) #19	CCT8L2 (ENSCHIG00000010339) #20	KMT2C (ENSCHIG00000012628) #22	GALNT11 (ENSCHIG00000026778) #23	GALNTL5 (ENSCHIG00000019057) #24	PRKAG2 (ENSCHIG00000024028) #25	RHEB (ENSCHIG00000017350) #26	CRYGN (ENSCHIG00000027202) #27	WDR86 (ENSCHIG00000018401) #28	NUB1 (ENSCHIG00000010018) #29	SMARCD3 (ENSCHIG00000024917) #30	CHPF2 (ENSCHIG00000014448) #31	ABCF2 (ENSCHIG00000025680) #32	H2BK1 (ENSCHIG00000012881)	IQCA1L (ENSCHIG00000018006) #33	ASB10 (ENSCHIG00000013692) #34	GBX1 (ENSCHIG00000020266) #35	AGAP3 (ENSCHIG00000013334) #36
Siberian musk deer	MODERN SPECIES	302	NOM1 (ENSMMSG00000006749)	LMBR1 (ENSMMSG00000006852)	RNF32 (ENSMMSG00000007083)	SHH (ENSMMSG00000007351) #7	RBM33 (ENSMMSG00000007384) #8	ENSMMSG00000007453	ENSMMSG00000007461 ##10	EN2 (ENSMMSG00000007514) #11	INSIG1 (ENSMMSG00000007539) #12	HTR5A (ENSMMSG00000007561) #13	PAXIP1 (ENSMMSG00000007585) #14	DPP6 (ENSMMSG00000007730) #16	ENSMMSG00000008408 #18	XRCC2 (ENSMMSG00000008501) #19	CCT8L2 (ENSMMSG00000008518) #20	KMT2C (ENSMMSG00000008600) #22	GALNT11 (ENSMMSG00000009289) #23	GALNTL5 (ENSMMSG00000009329) #24	PRKAG2 (ENSMMSG00000009412) #25	RHEB (ENSMMSG00000009606) #26	CRYGN (ENSMMSG00000009651) #27	WDR86 (ENSMMSG00000009684) #28	NUB1 (ENSMMSG00000009723) #29	SMARCD3 (ENSMMSG00000009749) #30	CHPF2 (ENSMMSG00000009840) #31	ABCF2 (ENSMMSG00000009907) #32	ENSMMSG00000009985	IQCA1L (ENSMMSG00000010011) #33	ASB10 (ENSMMSG00000010120) #34	GBX1 (ENSMMSG00000010197) #35	AGAP3 (ENSMMSG00000010288) #36