Mus	ANCESTRAL SPECIES	18	ENSGT00390000008360 #7	ENSGT00940000155105.q.b #8	ENSGT00940000155105.q.a #9	ENSGT00940000155106 #10	ENSGT00390000014167 #11	ENSGT00940000163747 #12	ENSGT00940000157289.a #13	ENSGT00940000158071 #14	ENSGT00530000063853.a.a.b #15	ENSGT01050000244939.a.a.a #16	ENSGT00390000018605 #17	ENSGT00940000157533 #18	ENSGT00400000022103.a #19	ENSGT00390000001805 #20	ENSGT00940000157075 #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #26	ENSGT00390000003564 #27	ENSGT00940000157040 #28	ENSGT00940000163681 #29	ENSGT00940000163455	ENSGT00950000182848.c.b.a.a #30	ENSGT00940000156849 #31	ENSGT00390000001263 #32	ENSGT00940000154772 #33	ENSGT00940000156581 #34	ENSGT00390000006777.b #35	ENSGT00530000063859.a #36
Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000008360 #7	ENSGT00940000155105.q.b #8	ENSGT00940000155105.q.a #9	ENSGT00940000155106 #10	ENSGT00390000014167 #11	ENSGT00940000163747 #12	ENSGT00940000157289.a #13	ENSGT00940000158071 #14	ENSGT00530000063853.a.a.b #15	ENSGT01050000244939.a.a.a #16	ENSGT00390000018605 #17	ENSGT00940000157533 #18	ENSGT00400000022103.a #19	ENSGT00390000001805 #20	ENSGT00940000157075 #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #26	ENSGT00390000003564 #27	ENSGT00940000157040 #28	ENSGT00940000163681 #29	ENSGT00940000163455	ENSGT00950000182848.c.b.a.a #30	ENSGT00940000156849 #31	ENSGT00390000001263 #32	ENSGT00940000154772 #33	ENSGT00940000156581 #34	ENSGT00390000006777.b #35	ENSGT00530000063859.a #36
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000008360 #7	ENSGT00940000155105.q.b #8	ENSGT00940000155105.q.a #9	ENSGT00940000155106 #10	ENSGT00390000014167 #11	ENSGT00940000163747 #12	ENSGT00940000157289.a #13	ENSGT00940000158071 #14	ENSGT00530000063853.a.a.b #15	ENSGT01050000244939.a.a.a #16	ENSGT00390000018605 #17	ENSGT00940000157533 #18	ENSGT00400000022103.a #19	ENSGT00390000001805 #20	ENSGT00940000157075 #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #26	ENSGT00390000003564 #27	ENSGT00940000157040 #28	ENSGT00940000163681 #29	ENSGT00940000163455	ENSGT00950000182848.c.b.a.a #30	ENSGT00940000156849 #31	ENSGT00390000001263 #32	ENSGT00940000154772 #33	ENSGT00940000156581 #34	ENSGT00390000006777.b #35	ENSGT00530000063859.a #36
Mouse	MODERN SPECIES	4	Tex56 (ENSMUSG00000021415) #7	Eci3 (ENSMUSG00000021416) #8	Eci2 (ENSMUSG00000021417) #9	Cdyl (ENSMUSG00000059288) #10	Rpp40 (ENSMUSG00000021418) #11	Ppp1r3g (ENSMUSG00000050423) #12	Lyrm4 (ENSMUSG00000046573) #13	Fars2 (ENSMUSG00000021420) #14	Nrn1 (ENSMUSG00000039114) #15	F13a1 (ENSMUSG00000039109) #16	Ly86 (ENSMUSG00000021423) #17	Rreb1 (ENSMUSG00000039087) #18	Ssr1 (ENSMUSG00000021427) #19	Cage1 (ENSMUSG00000044566) #20	Riok1 (ENSMUSG00000021428) #21	Dsp (ENSMUSG00000054889) #22	Snrnp48 (ENSMUSG00000021431) #23	Bmp6 (ENSMUSG00000039004) #24	Txndc5 (ENSMUSG00000038991) #25	Bloc1s5 (ENSMUSG00000038982) #26	Eef1e1 (ENSMUSG00000001707) #27	Slc35b3 (ENSMUSG00000021432) #28	Ofcc1 (ENSMUSG00000047094) #29	Tfap2a (ENSMUSG00000021359) #30	Gcnt2 (ENSMUSG00000021360) #31	Pak1ip1 (ENSMUSG00000038683) #32	Tmem14c (ENSMUSG00000021361) #33	Mak (ENSMUSG00000021363) #34	Gcm2 (ENSMUSG00000021362) #35	Sycp2l (ENSMUSG00000038651) #36	Elovl2 (ENSMUSG00000021364) #37
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000008360 #7	ENSGT00940000155105.q.b #8	ENSGT00940000155105.q.a #9	ENSGT00940000155106 #10	ENSGT00390000014167 #11	ENSGT00940000163747 #12	ENSGT00940000157289.a #13	ENSGT00940000158071 #14	ENSGT00530000063853.a.a.b #15	ENSGT01050000244939.a.a.a #16	ENSGT00390000018605 #17	ENSGT00940000157533 #18	ENSGT00400000022103.a #19	ENSGT00390000001805 #20	ENSGT00940000157075 #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #26	ENSGT00390000003564 #27	ENSGT00940000157040 #28	ENSGT00940000163681 #29	ENSGT00940000163455	ENSGT00950000182848.c.b.a.a #30	ENSGT00940000165524	ENSGT00390000001263 #32	ENSGT00940000154772 #33	ENSGT00940000156581 #34	ENSGT00390000006777.b #35	ENSGT00530000063859.a #36
spretus	MODERN SPECIES	4	MGP_SPRETEiJ_G0019305	MGP_SPRETEiJ_G0019306	MGP_SPRETEiJ_G0019307	Cdyl (MGP_SPRETEiJ_G0019308) #10	Rpp40 (MGP_SPRETEiJ_G0019309) #11	Ppp1r3g (MGP_SPRETEiJ_G0019310) #12	Lyrm4 (MGP_SPRETEiJ_G0019311) #13	Fars2 (MGP_SPRETEiJ_G0019312) #14	Nrn1 (MGP_SPRETEiJ_G0019313) #15	F13a1 (MGP_SPRETEiJ_G0019314) #16	Ly86 (MGP_SPRETEiJ_G0019315) #17	Rreb1 (MGP_SPRETEiJ_G0019316) #18	Ssr1 (MGP_SPRETEiJ_G0019317) #19	Cage1 (MGP_SPRETEiJ_G0019318) #20	Riok1 (MGP_SPRETEiJ_G0019319) #21	Dsp (MGP_SPRETEiJ_G0019320) #22	Snrnp48 (MGP_SPRETEiJ_G0019321) #23	Bmp6 (MGP_SPRETEiJ_G0019322) #24	Txndc5 (MGP_SPRETEiJ_G0019323) #25	Bloc1s5 (MGP_SPRETEiJ_G0019324) #26	Slc35b3 (MGP_SPRETEiJ_G0019325) #28	Ofcc1 (MGP_SPRETEiJ_G0019326) #29	MGP_SPRETEiJ_G0019327	Tfap2a (MGP_SPRETEiJ_G0019328) #30	MGP_SPRETEiJ_G0019329	Pak1ip1 (MGP_SPRETEiJ_G0019330) #32	Tmem14c (MGP_SPRETEiJ_G0019331) #33	Mak (MGP_SPRETEiJ_G0019332) #34	Gcm2 (MGP_SPRETEiJ_G0019333) #35	Elovl2 (MGP_SPRETEiJ_G0019335) #37	Smim13 (MGP_SPRETEiJ_G0019336)
Steppe mouse	MODERN SPECIES	3420									Nrn1 (ENSMSIG00000030265) #15	F13a1 (ENSMSIG00000030273) #16	ENSMSIG00000030279 #17	Rreb1 (ENSMSIG00000030286) #18	Ssr1 (ENSMSIG00000002117) #19	Cage1 (ENSMSIG00000002367) #20	Riok1 (ENSMSIG00000002490) #21	Dsp (ENSMSIG00000002602) #22	Snrnp48 (ENSMSIG00000002687) #23	Bmp6 (ENSMSIG00000002718) #24	Txndc5 (ENSMSIG00000002766) #25	Bloc1s5 (ENSMSIG00000002907) #26	ENSMSIG00000002981 #27	Slc35b3 (ENSMSIG00000003005) #28	ENSMSIG00000003112 #29	ENSMSIG00000003171	Tfap2a (ENSMSIG00000003209) #30	ENSMSIG00000003566	ENSMSIG00000003578	Pak1ip1 (ENSMSIG00000003627) #32	Tmem14c (ENSMSIG00000003687) #33	Mak (ENSMSIG00000003703) #34	Gcm2 (ENSMSIG00000004008) #35
Ryukyu mouse	MODERN SPECIES	4	Tex56 (MGP_CAROLIEiJ_G0018425) #7	Eci3 (MGP_CAROLIEiJ_G0018426) #8	Eci2 (MGP_CAROLIEiJ_G0018427) #9	Cdyl (MGP_CAROLIEiJ_G0018428) #10	Rpp40 (MGP_CAROLIEiJ_G0018429) #11	Ppp1r3g (MGP_CAROLIEiJ_G0018430) #12	Lyrm4 (MGP_CAROLIEiJ_G0018431) #13	Fars2 (MGP_CAROLIEiJ_G0018432) #14	Nrn1 (MGP_CAROLIEiJ_G0018433) #15	F13a1 (MGP_CAROLIEiJ_G0018434) #16	Ly86 (MGP_CAROLIEiJ_G0018435) #17	Rreb1 (MGP_CAROLIEiJ_G0018436) #18	Ssr1 (MGP_CAROLIEiJ_G0018437) #19	Cage1 (MGP_CAROLIEiJ_G0018438) #20	Riok1 (MGP_CAROLIEiJ_G0018439) #21	Dsp (MGP_CAROLIEiJ_G0018440) #22	Snrnp48 (MGP_CAROLIEiJ_G0018441) #23	Bmp6 (MGP_CAROLIEiJ_G0018442) #24	Txndc5 (MGP_CAROLIEiJ_G0018443) #25	Bloc1s5 (MGP_CAROLIEiJ_G0018444) #26	Eef1e1 (MGP_CAROLIEiJ_G0018445) #27	Slc35b3 (MGP_CAROLIEiJ_G0018446) #28	Ofcc1 (MGP_CAROLIEiJ_G0018447) #29	MGP_CAROLIEiJ_G0018448	Tfap2a (MGP_CAROLIEiJ_G0018449) #30	MGP_CAROLIEiJ_G0018450	Pak1ip1 (MGP_CAROLIEiJ_G0018451) #32	Tmem14c (MGP_CAROLIEiJ_G0018452) #33	Mak (MGP_CAROLIEiJ_G0018453) #34	Gcm2 (MGP_CAROLIEiJ_G0018454) #35	MGP_CAROLIEiJ_G0018455 #36
Shrew mouse	MODERN SPECIES	7	Tex56 (MGP_PahariEiJ_G0019493) #7	Eci3 (MGP_PahariEiJ_G0019494) #8	Eci2 (MGP_PahariEiJ_G0019495) #9	Cdyl (MGP_PahariEiJ_G0019496) #10	Rpp40 (MGP_PahariEiJ_G0019497) #11	Ppp1r3g (MGP_PahariEiJ_G0019498) #12	Lyrm4 (MGP_PahariEiJ_G0019499) #13	Fars2 (MGP_PahariEiJ_G0019500) #14	Nrn1 (MGP_PahariEiJ_G0019501) #15	F13a1 (MGP_PahariEiJ_G0019502) #16	Ly86 (MGP_PahariEiJ_G0019503) #17	Rreb1 (MGP_PahariEiJ_G0019504) #18	Ssr1 (MGP_PahariEiJ_G0019505) #19	Cage1 (MGP_PahariEiJ_G0019506) #20	Riok1 (MGP_PahariEiJ_G0019507) #21	Dsp (MGP_PahariEiJ_G0019508) #22	Snrnp48 (MGP_PahariEiJ_G0019509) #23	Bmp6 (MGP_PahariEiJ_G0019510) #24	Txndc5 (MGP_PahariEiJ_G0019511) #25	Bloc1s5 (MGP_PahariEiJ_G0019512) #26	Eef1e1 (MGP_PahariEiJ_G0019513) #27	Slc35b3 (MGP_PahariEiJ_G0019514) #28	Ofcc1 (MGP_PahariEiJ_G0019515) #29	MGP_PahariEiJ_G0019516	Tfap2a (MGP_PahariEiJ_G0019517) #30	MGP_PahariEiJ_G0019518	Pak1ip1 (MGP_PahariEiJ_G0019519) #32	Tmem14c (MGP_PahariEiJ_G0019520) #33	Mak (MGP_PahariEiJ_G0019521) #34	Gcm2 (MGP_PahariEiJ_G0019522) #35	MGP_PahariEiJ_G0019523 #36