Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00940000154843.F #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000154843.F #22
Gnathostomata	ANCESTRAL SPECIES	407															ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000153769.B	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27
Euteleostomi	ANCESTRAL SPECIES	39	ENSGT00390000009209	ENSGT00910000144592	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158302.e	ENSGT00390000018540	ENSGT00940000166078	ENSGT00940000153769.B	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35
Sarcopterygii	ANCESTRAL SPECIES	40	ENSGT00940000155562	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158302.e	ENSGT00940000153769.B	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772
Tetrapoda	ANCESTRAL SPECIES	1	ENSGT00940000155562	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158302.e	ENSGT00940000153769.B	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772
Amniota	ANCESTRAL SPECIES	3	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Mammalia	ANCESTRAL SPECIES	3	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Theria	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Eutheria	ANCESTRAL SPECIES	30	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581
Primates	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000163914	ENSGT00940000156581
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000155105	ENSGT00910000147523	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00910000147523	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.t #19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.s.a
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00910000147523	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.t #19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.s.a
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00950000183142.a.b.a.b.p #10	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a #11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000008610.a.b.a.a.a.t.h.a #19	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.t.i ##19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00910000146788 #37	ENSGT00390000001263	ENSGT00940000154772.s.a
Cercopithecinae_b	ANCESTRAL SPECIES	37	ENSGT00390000014167 #8	ENSGT00910000147352 #9	ENSGT00950000183142.a.b.a.b.p #10	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a #11	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.t.h.a #19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00910000146788 #37	ENSGT00390000001263	ENSGT00940000154772.s.a
Cercopithecinae_d	ANCESTRAL SPECIES	41	ENSGT00390000014167 #8	ENSGT00910000147352 #9	ENSGT00950000183142.a.b.a.b.p #10	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a #11	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.t.h.a #19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00910000146788 #37	ENSGT00390000001263	ENSGT00940000154772.s.a
Sooty mangabey	MODERN SPECIES	385	CDYL (ENSCATG00000038624) #7	RPP40 (ENSCATG00000038787) #8	ENSCATG00000042252 #9	ENSCATG00000043081 #10	ENSCATG00000035234 #11	FARS2 (ENSCATG00000038588) #12	NRN1 (ENSCATG00000043786) #13	F13A1 (ENSCATG00000043896) #14	LY86 (ENSCATG00000038100) #15	RREB1 (ENSCATG00000043662) #16	SSR1 (ENSCATG00000037180) #17	CAGE1 (ENSCATG00000030215) #18	ENSCATG00000037875 #19	RIOK1 (ENSCATG00000001548) #20	ENSCATG00000013581 #21	DSP (ENSCATG00000034897) #22	SNRNP48 (ENSCATG00000033947) #23	BMP6 (ENSCATG00000040011) #24	TXNDC5 (ENSCATG00000031520) #25	ENSCATG00000039499 #26	BLOC1S5 (ENSCATG00000043344) #27	EEF1E1 (ENSCATG00000038260) #28	SLC35B3 (ENSCATG00000029745) #29	ENSCATG00000036873 #30	ENSCATG00000005265 #31	ENSCATG00000031464 #32	TFAP2A (ENSCATG00000040906) #33	ENSCATG00000026811 #34	GCNT2 (ENSCATG00000045362) #35	C6orf52 (ENSCATG00000033015) #36	ENSCATG00000037225 #37
Drill	MODERN SPECIES	1017										RREB1 (ENSMLEG00000040965) #16	SSR1 (ENSMLEG00000038033) #17	CAGE1 (ENSMLEG00000044083) #18	ENSMLEG00000032606 #19	RIOK1 (ENSMLEG00000026327) #20	ENSMLEG00000041390 #21	DSP (ENSMLEG00000041552) #22	SNRNP48 (ENSMLEG00000034004) #23	BMP6 (ENSMLEG00000042815) #24	ENSMLEG00000014123	TXNDC5 (ENSMLEG00000041843) #25	ENSMLEG00000039944 #26	BLOC1S5 (ENSMLEG00000033993) #27	EEF1E1 (ENSMLEG00000032511) #28	SLC35B3 (ENSMLEG00000037638) #29	ENSMLEG00000032653 #32	TFAP2A (ENSMLEG00000042408) #33	ENSMLEG00000043784 #34	GCNT2 (ENSMLEG00000041262) #35	C6orf52 (ENSMLEG00000029992) #36	ENSMLEG00000043808 #37	PAK1IP1 (ENSMLEG00000031851)
Olive baboon	MODERN SPECIES	16	ECI2 (ENSPANG00000025189)	CDYL (ENSPANG00000023577) #7	ENSPANG00000045914	RPP40 (ENSPANG00000017865) #8	ENSPANG00000046029 ##11	ENSPANG00000023576 #11	FARS2 (ENSPANG00000018208) #12	NRN1 (ENSPANG00000001032) #13	F13A1 (ENSPANG00000017903) #14	ENSPANG00000019551 #15	ENSPANG00000038982 ##11	RREB1 (ENSPANG00000019553) #16	SSR1 (ENSPANG00000015753) #17	CAGE1 (ENSPANG00000018207) #18	RIOK1 (ENSPANG00000016522) #20	DSP (ENSPANG00000017900) #22	SNRNP48 (ENSPANG00000000771) #23	BMP6 (ENSPANG00000040671) #24	TXNDC5 (ENSPANG00000022434) #25	ENSPANG00000030926	EEF1E1 (ENSPANG00000018352) #28	ENSPANG00000048253	ENSPANG00000038372	SLC35B3 (ENSPANG00000040288) #29	ENSPANG00000050520	TFAP2A (ENSPANG00000022354) #33	ENSPANG00000039658	GCNT2 (ENSPANG00000006820) #35	MAK (ENSPANG00000008443)	C6orf52 (ENSPANG00000012699) #36	PAK1IP1 (ENSPANG00000037093)
Macaca	ANCESTRAL SPECIES	23	ENSGT00910000147352 #9	ENSGT00950000183142.a.b.a.b.p #10	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b.a #11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.t.i ##19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00390000004803.h #31	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00910000146788 #37	ENSGT00390000001263
Pig-tailed macaque	MODERN SPECIES	136	RPP40 (ENSMNEG00000041986) #8	ENSMNEG00000003878 #9	ENSMNEG00000045067 #10	ENSMNEG00000041203	ENSMNEG00000042081 #11	FARS2 (ENSMNEG00000044897) #12	NRN1 (ENSMNEG00000041129) #13	F13A1 (ENSMNEG00000040730) #14	LY86 (ENSMNEG00000045408) #15	RREB1 (ENSMNEG00000038556) #16	SSR1 (ENSMNEG00000039105) #17	CAGE1 (ENSMNEG00000033634) #18	ENSMNEG00000034466 ##19	RIOK1 (ENSMNEG00000034396) #20	ENSMNEG00000028700 #21	DSP (ENSMNEG00000040416) #22	SNRNP48 (ENSMNEG00000042269) #23	BMP6 (ENSMNEG00000035190) #24	TXNDC5 (ENSMNEG00000032269) #25	ENSMNEG00000037840	ENSMNEG00000039687 #26	BLOC1S5 (ENSMNEG00000002839) #27	EEF1E1 (ENSMNEG00000035493) #28	SLC35B3 (ENSMNEG00000005122) #29	ENSMNEG00000037743 #31	ENSMNEG00000044460 #32	TFAP2A (ENSMNEG00000040025) #33	ENSMNEG00000033728 #34	GCNT2 (ENSMNEG00000036260) #35	ENSMNEG00000037658 #35
Macaca_a	ANCESTRAL SPECIES	24	ENSGT00390000008360	ENSGT00940000155105	ENSGT00910000147523	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00910000147352 #9	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.t	ENSGT00940000163914.c.b.a	ENSGT00940000156581	ENSGT00390000006777.b
Crab-eating macaque	MODERN SPECIES	14	ECI2 (ENSMFAG00000039175)	ENSMFAG00000061853	CDYL (ENSMFAG00000042478) #7	RPP40 (ENSMFAG00000043100) #8	ENSMFAG00000054956 #9	ENSMFAG00000002120	FARS2 (ENSMFAG00000043484) #12	NRN1 (ENSMFAG00000062211) #13	F13A1 (ENSMFAG00000001306) #14	ENSMFAG00000031478 #15	ENSMFAG00000056468	RREB1 (ENSMFAG00000000389) #16	SSR1 (ENSMFAG00000039497) #17	CAGE1 (ENSMFAG00000002983) #18	RIOK1 (ENSMFAG00000029990) #20	DSP (ENSMFAG00000031913) #22	SNRNP48 (ENSMFAG00000045216) #23	BMP6 (ENSMFAG00000045794) #24	ENSMFAG00000004381 #26	TXNDC5 (ENSMFAG00000036977) #25	EEF1E1 (ENSMFAG00000000745) #28	SLC35B3 (ENSMFAG00000000520) #29	ENSMFAG00000008983 #31	ENSMFAG00000003809 #32	ENSMFAG00000060049	TFAP2A (ENSMFAG00000039760) #33	GCNT2 (ENSMFAG00000033469) #35	ENSMFAG00000054715 #37	C6orf52 (ENSMFAG00000059982) #36	PAK1IP1 (ENSMFAG00000049083)	ENSMFAG00000043333
Rhesus	MODERN SPECIES	14	CDYL (ENSMMUG00000004964) #7	RPP40 (ENSMMUG00000004966) #8	PPP1R3G (ENSMMUG00000061878)	ENSMMUG00000049865	ENSMMUG00000057424	FARS2 (ENSMMUG00000016352) #12	NRN1 (ENSMMUG00000064807) #13	ENSMMUG00000056859	F13A1 (ENSMMUG00000001248) #14	ENSMMUG00000052552	LY86 (ENSMMUG00000057286) #15	RREB1 (ENSMMUG00000007852) #16	SSR1 (ENSMMUG00000002147) #17	CAGE1 (ENSMMUG00000015575) #18	RIOK1 (ENSMMUG00000015577) #20	DSP (ENSMMUG00000014784) #22	SNRNP48 (ENSMMUG00000014785) #23	BMP6 (ENSMMUG00000021600) #24	ENSMMUG00000044859 #26	BLOC1S5 (ENSMMUG00000038560) #25	SLC35B3 (ENSMMUG00000010672) #29	TFAP2A (ENSMMUG00000006186) #33	ENSMMUG00000051772 #34	GCNT2 (ENSMMUG00000020132) #35	C4H6orf52 (ENSMMUG00000061586) #36	PAK1IP1 (ENSMMUG00000018787)	TMEM14B (ENSMMUG00000018788)	MAK (ENSMMUG00000005532)	GCM2 (ENSMMUG00000007719)	SYCP2L (ENSMMUG00000007720)	ELOVL2 (ENSMMUG00000013908)
Vervet Monkey	MODERN SPECIES	8	FAM217A (ENSCSAG00000007279)	ENSCSAG00000007286	ECI2 (ENSCSAG00000007294)	CDYL (ENSCSAG00000007301) #7	RPP40 (ENSCSAG00000007307) #8	PPP1R3G (ENSCSAG00000019110)	LYRM4 (ENSCSAG00000007314)	FARS2 (ENSCSAG00000007344) #12	NRN1 (ENSCSAG00000007350) #13	F13A1 (ENSCSAG00000007361) #14	LY86 (ENSCSAG00000007369) #15	RREB1 (ENSCSAG00000007376) #16	SSR1 (ENSCSAG00000007383) #17	CAGE1 (ENSCSAG00000007390) #18	RIOK1 (ENSCSAG00000007396) #20	DSP (ENSCSAG00000007404) #22	SNRNP48 (ENSCSAG00000007409) #23	BMP6 (ENSCSAG00000007413) #24	TXNDC5 (ENSCSAG00000007421) #25	BLOC1S5 (ENSCSAG00000007425) #27	EEF1E1 (ENSCSAG00000007429) #28	SLC35B3 (ENSCSAG00000007435) #29	ENSCSAG00000007438	ENSCSAG00000007443 #32	TFAP2A (ENSCSAG00000007447) #33	GCNT2 (ENSCSAG00000007451) #35	C6orf52 (ENSCSAG00000007454) #36	PAK1IP1 (ENSCSAG00000007457)	ENSCSAG00000007460	ENSCSAG00000007463	GCM2 (ENSCSAG00000007467)
Rhinopithecus	ANCESTRAL SPECIES	271			ENSGT00950000183142.a.b.a.b.p #10	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.a.a.a.b #11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564.j #28	ENSGT00940000157040 #29
Black snub-nosed monkey	MODERN SPECIES	623	TAAR6 (ENSRBIG00000033492)	TAAR5 (ENSRBIG00000003009)	TAAR2 (ENSRBIG00000038395)	VNN1 (ENSRBIG00000036270)	ENSRBIG00000044983	VNN2 (ENSRBIG00000036583)	SLC18B1 (ENSRBIG00000006237)	RPS12 (ENSRBIG00000029886)	EYA4 (ENSRBIG00000023700)	TCF21 (ENSRBIG00000032927)	SSR1 (ENSRBIG00000028076) #17	CAGE1 (ENSRBIG00000033392) #18	ENSRBIG00000033623 #19	RIOK1 (ENSRBIG00000036685) #20	ENSRBIG00000004417 #21	DSP (ENSRBIG00000040544) #22	SNRNP48 (ENSRBIG00000043856) #23	BMP6 (ENSRBIG00000030865) #24	TXNDC5 (ENSRBIG00000028339) #25	ENSRBIG00000036820 #26	BLOC1S5 (ENSRBIG00000037450) #27	ENSRBIG00000033472 #28	SLC35B3 (ENSRBIG00000031147) #29
Golden snub-nosed monkey	MODERN SPECIES	2293									LY86 (ENSRROG00000002665) #15	RREB1 (ENSRROG00000039603) #16	SSR1 (ENSRROG00000035450) #17	ENSRROG00000037141 #19	CAGE1 (ENSRROG00000044698) #18	RIOK1 (ENSRROG00000036611) #20	ENSRROG00000039689 #21	DSP (ENSRROG00000038096) #22	SNRNP48 (ENSRROG00000043229) #23	BMP6 (ENSRROG00000032319) #24	TXNDC5 (ENSRROG00000032967) #25	ENSRROG00000043599 #26	BLOC1S5 (ENSRROG00000043572) #27	ENSRROG00000034778 #28	SLC35B3 (ENSRROG00000042188) #29
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000169445	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.b.b.b ##11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000163914
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000163747	ENSGT00940000169445	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.b.b.b ##11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.s.a.a ##19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000163914
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000169445	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.b.b.b ##11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000153288.a.a.h.d	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.s.a.a.a ##19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768.p #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000012955.v #34	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000163914.f.a
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000169445	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.b.b.b ##11	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000153288.a.a.h.d	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.s.a.a.a ##19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768.p #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000163914.f.a	ENSGT00940000156581
Pan	ANCESTRAL SPECIES	29	ENSGT00940000169445	ENSGT00910000146968	ENSGT00940000161627.a.a.a.b.b.b.b.b.b ##11	ENSGT00940000158071 #12	ENSGT00390000008859.b.d.k.a.b.a	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000153288.a.a.h.d	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00390000008610.a.b.a.a.a.s.a.a.a ##19	ENSGT00940000157075 #20	ENSGT00390000012547.b.b.a #21	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768.p #24	ENSGT00940000156920 #25	ENSGT00940000154703.e.a #26	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000163914.f.a	ENSGT00940000156581
Chimpanzee	MODERN SPECIES	19	ENSPTRG00000049487	LYRM4 (ENSPTRG00000017691) ##11	FARS2 (ENSPTRG00000017692) #12	ENSPTRG00000049807	ENSPTRG00000044064	NRN1 (ENSPTRG00000017693) #13	F13A1 (ENSPTRG00000017694) #14	LY86 (ENSPTRG00000017696) #15	ENSPTRG00000046122	RREB1 (ENSPTRG00000017697) #16	SSR1 (ENSPTRG00000017698) #17	CAGE1 (ENSPTRG00000017699) #18	ENSPTRG00000047374 ##19	RIOK1 (ENSPTRG00000017700) #20	ENSPTRG00000050048 #21	DSP (ENSPTRG00000017702) #22	SNRNP48 (ENSPTRG00000017703) #23	BMP6 (ENSPTRG00000017705) #24	TXNDC5 (ENSPTRG00000017708) #25	ENSPTRG00000044939 #26	BLOC1S5 (ENSPTRG00000048795) #27	EEF1E1 (ENSPTRG00000017709) #28	SLC35B3 (ENSPTRG00000017710) #29	ENSPTRG00000017711 #32	TFAP2A (ENSPTRG00000017714) #33	GCNT2 (ENSPTRG00000017717) #35	C6H6orf52 (ENSPTRG00000017718) #36	PAK1IP1 (ENSPTRG00000017719)	TMEM14C (ENSPTRG00000017720)	TMEM14B (ENSPTRG00000017721)	MAK (ENSPTRG00000017722)
Bonobo	MODERN SPECIES	19	ENSPPAG00000009976	ENSPPAG00000028919 ##11	FARS2 (ENSPPAG00000040551) #12	ENSPPAG00000038177	ENSPPAG00000037456	ENSPPAG00000040029 #13	F13A1 (ENSPPAG00000002226) #14	LY86 (ENSPPAG00000032346) #15	ENSPPAG00000041064	RREB1 (ENSPPAG00000037017) #16	SSR1 (ENSPPAG00000031246) #17	CAGE1 (ENSPPAG00000033711) #18	ENSPPAG00000039573 ##19	RIOK1 (ENSPPAG00000016349) #20	ENSPPAG00000041327 #21	DSP (ENSPPAG00000031494) #22	SNRNP48 (ENSPPAG00000032873) #23	BMP6 (ENSPPAG00000002110) #24	TXNDC5 (ENSPPAG00000038633) #25	ENSPPAG00000043373 #26	BLOC1S5 (ENSPPAG00000027769) #27	EEF1E1 (ENSPPAG00000035045) #28	SLC35B3 (ENSPPAG00000039344) #29	ENSPPAG00000042636 #32	ENSPPAG00000043300 #33	GCNT2 (ENSPPAG00000041367) #35	C6orf52 (ENSPPAG00000028663) #36	PAK1IP1 (ENSPPAG00000027804)	TMEM14C (ENSPPAG00000038469)	ENSPPAG00000029483	MAK (ENSPPAG00000031369)
Human	MODERN SPECIES	18	PRPF4B (ENSG00000112739)	FAM217A (ENSG00000145975)	ECI2 (ENSG00000198721)	CDYL (ENSG00000153046) #7	RPP40 (ENSG00000124787) #8	PPP1R3G (ENSG00000219607)	LYRM4 (ENSG00000214113)	FARS2 (ENSG00000145982) #12	NRN1 (ENSG00000124785) #13	F13A1 (ENSG00000124491) #14	LY86 (ENSG00000112799) #15	RREB1 (ENSG00000124782) #16	SSR1 (ENSG00000124783) #17	CAGE1 (ENSG00000164304) #18	RIOK1 (ENSG00000124784) #20	DSP (ENSG00000096696) #22	SNRNP48 (ENSG00000168566) #23	BMP6 (ENSG00000153162) #24	TXNDC5 (ENSG00000239264) #25	BLOC1S5 (ENSG00000188428) #27	EEF1E1 (ENSG00000124802) #28	SLC35B3 (ENSG00000124786) #29	TFAP2A (ENSG00000137203) #33	GCNT2 (ENSG00000111846) #35	C6orf52 (ENSG00000137434) #36	PAK1IP1 (ENSG00000111845)	TMEM14C (ENSG00000111843)	TMEM14B (ENSG00000137210)	MAK (ENSG00000111837)	GCM2 (ENSG00000124827)	SYCP2L (ENSG00000153157)
Gorilla	MODERN SPECIES	19	ENSGGOG00000041108	FARS2 (ENSGGOG00000011842) #12	ENSGGOG00000039665	ENSGGOG00000024909	ENSGGOG00000005223 #13	F13A1 (ENSGGOG00000001196) #14	LY86 (ENSGGOG00000024223) #15	ENSGGOG00000022862	RREB1 (ENSGGOG00000004561) #16	SSR1 (ENSGGOG00000004566) #17	CAGE1 (ENSGGOG00000011030) #18	ENSGGOG00000038504 ##19	ENSGGOG00000022405 ##19	RIOK1 (ENSGGOG00000011037) #20	ENSGGOG00000040077 #21	DSP (ENSGGOG00000013213) #22	SNRNP48 (ENSGGOG00000013220) #23	BMP6 (ENSGGOG00000000904) #24	TXNDC5 (ENSGGOG00000000906) #25	ENSGGOG00000026610 #26	BLOC1S5 (ENSGGOG00000040405) #27	ENSGGOG00000009591 #28	SLC35B3 (ENSGGOG00000011511) #29	ENSGGOG00000006522 #32	TFAP2A (ENSGGOG00000007542) #33	ENSGGOG00000013682 #34	ENSGGOG00000004765 #35	C6orf52 (ENSGGOG00000013899) #36	PAK1IP1 (ENSGGOG00000013026)	TMEM14C (ENSGGOG00000016952)	ENSGGOG00000009702
Orangutan	MODERN SPECIES	19	ENSPPYG00000016193	RPP40 (ENSPPYG00000016194) #8	PPP1R3G (ENSPPYG00000040553)	ENSPPYG00000030077	ENSPPYG00000039334 ##11	FARS2 (ENSPPYG00000016197) #12	ENSPPYG00000040794	ENSPPYG00000016199 #13	F13A1 (ENSPPYG00000016200) #14	LY86 (ENSPPYG00000035465) #15	RREB1 (ENSPPYG00000016204) #16	SSR1 (ENSPPYG00000016205) #17	CAGE1 (ENSPPYG00000016206) #18	ENSPPYG00000038045 ##19	RIOK1 (ENSPPYG00000016207) #20	DSP (ENSPPYG00000016208) #22	SNRNP48 (ENSPPYG00000016209) #23	BMP6 (ENSPPYG00000016210) #24	TXNDC5 (ENSPPYG00000016212) #25	ENSPPYG00000016213 #26	BLOC1S5 (ENSPPYG00000038742) #27	EEF1E1 (ENSPPYG00000016215) #28	SLC35B3 (ENSPPYG00000016216) #29	ENSPPYG00000016217 #32	TFAP2A (ENSPPYG00000016218) #33	ENSPPYG00000033781 #34	GCNT2 (ENSPPYG00000016221) #35	C6orf52 (ENSPPYG00000016223) #36	PAK1IP1 (ENSPPYG00000016224)	TMEM14C (ENSPPYG00000030032)	ENSPPYG00000016225
Gibbon	MODERN SPECIES	23	ENSNLEG00000028872	ENSNLEG00000011472 ##11	ENSNLEG00000030412	FARS2 (ENSNLEG00000011479) #12	NRN1 (ENSNLEG00000011502) #13	F13A1 (ENSNLEG00000011509) #14	LY86 (ENSNLEG00000011547) #15	RREB1 (ENSNLEG00000011554) #16	SSR1 (ENSNLEG00000011572) #17	CAGE1 (ENSNLEG00000011592) #18	ENSNLEG00000032024	ENSNLEG00000027260 ##19	ENSNLEG00000027842	ENSNLEG00000011621 #20	ENSNLEG00000029272 #21	DSP (ENSNLEG00000011664) #22	SNRNP48 (ENSNLEG00000011667) #23	ENSNLEG00000011672 #24	TXNDC5 (ENSNLEG00000011683) #25	ENSNLEG00000027984 #26	BLOC1S5 (ENSNLEG00000029882) #27	EEF1E1 (ENSNLEG00000035609) #28	SLC35B3 (ENSNLEG00000030754) #29	ENSNLEG00000000485 #32	TFAP2A (ENSNLEG00000000503) #33	ENSNLEG00000028993 #34	ENSNLEG00000000512 #35	C6orf52 (ENSNLEG00000000544) #36	PAK1IP1 (ENSNLEG00000000550)	TMEM14C (ENSNLEG00000000564)	ENSNLEG00000000600
Platyrrhini	ANCESTRAL SPECIES	34	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a.a.a	ENSGT00940000157289.a.a.b	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.r	ENSGT00940000163914	ENSGT00940000154772.q	ENSGT00940000156581
Cebidae	ANCESTRAL SPECIES	33	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a.a.a	ENSGT00940000157289.a.a.b	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00530000063174.a.i.b	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.r	ENSGT00940000156581	ENSGT00390000006777.b
Cebidae_a	ANCESTRAL SPECIES	42	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00910000146968	ENSGT00940000157289.a.a.b	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00530000063174.a.i.b	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00390000001231.s.a.c	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.r	ENSGT00940000156581
Capuchin	MODERN SPECIES	43								NRN1 (ENSCCAG00000024735) #13	F13A1 (ENSCCAG00000036141) #14	LY86 (ENSCCAG00000020400) #15	RREB1 (ENSCCAG00000021905) #16	SSR1 (ENSCCAG00000030293) #17	CAGE1 (ENSCCAG00000037882) #18	RIOK1 (ENSCCAG00000024061) #20	ENSCCAG00000033486 ##21	DSP (ENSCCAG00000002153) #22	SNRNP48 (ENSCCAG00000035652) #23	BMP6 (ENSCCAG00000024255) #24	TXNDC5 (ENSCCAG00000022735) #25	BLOC1S5 (ENSCCAG00000023842) #27	ENSCCAG00000031071 #28	ENSCCAG00000035126	SLC35B3 (ENSCCAG00000026344) #29	ENSCCAG00000026536	ENSCCAG00000026702 #32	TFAP2A (ENSCCAG00000036532) #33	ENSCCAG00000029494	ENSCCAG00000024728	GCNT2 (ENSCCAG00000038039) #35	C6orf52 (ENSCCAG00000025777) #36	PAK1IP1 (ENSCCAG00000030045)
Bolivian squirrel monkey	MODERN SPECIES	64	ENSSBOG00000022307	ECI2 (ENSSBOG00000021463)	CDYL (ENSSBOG00000034197) #7	RPP40 (ENSSBOG00000020297) #8	ENSSBOG00000029411	ENSSBOG00000033795	FARS2 (ENSSBOG00000025432) #12	NRN1 (ENSSBOG00000016661) #13	F13A1 (ENSSBOG00000033902) #14	LY86 (ENSSBOG00000023968) #15	RREB1 (ENSSBOG00000025257) #16	SSR1 (ENSSBOG00000018080) #17	ENSSBOG00000027738	CAGE1 (ENSSBOG00000028524) #18	RIOK1 (ENSSBOG00000012588) #20	DSP (ENSSBOG00000035446) #22	SNRNP48 (ENSSBOG00000019486) #23	BMP6 (ENSSBOG00000031144) #24	TXNDC5 (ENSSBOG00000021066) #25	BLOC1S5 (ENSSBOG00000029914) #27	SLC35B3 (ENSSBOG00000020158) #29	ENSSBOG00000034534 #32	TFAP2A (ENSSBOG00000022864) #33	ENSSBOG00000025486	ENSSBOG00000018780	GCNT2 (ENSSBOG00000025973) #35	C6orf52 (ENSSBOG00000008885) #36	PAK1IP1 (ENSSBOG00000029190)	TMEM14C (ENSSBOG00000030151)	MAK (ENSSBOG00000031537)	GCM2 (ENSSBOG00000026197)
Marmoset	MODERN SPECIES	16	CDYL (ENSCJAG00000021374) #7	RPP40 (ENSCJAG00000021373) #8	PPP1R3G (ENSCJAG00000021371)	ENSCJAG00000069228	ENSCJAG00000021370	FARS2 (ENSCJAG00000021369) #12	NRN1 (ENSCJAG00000084548) #13	ENSCJAG00000055107	F13A1 (ENSCJAG00000021366) #14	LY86 (ENSCJAG00000021363) #15	ENSCJAG00000072565	RREB1 (ENSCJAG00000021358) #16	SSR1 (ENSCJAG00000044370) #17	CAGE1 (ENSCJAG00000021351) #18	RIOK1 (ENSCJAG00000042960) #20	DSP (ENSCJAG00000021333) #22	SNRNP48 (ENSCJAG00000021330) #23	ENSCJAG00000077015	ENSCJAG00000074889	ENSCJAG00000056342 #36	BMP6 (ENSCJAG00000021326) #24	TXNDC5 (ENSCJAG00000021322) #25	ENSCJAG00000069775	ENSCJAG00000069672	BLOC1S5 (ENSCJAG00000010580) #27	EEF1E1 (ENSCJAG00000079478) #28	ENSCJAG00000080871	SLC35B3 (ENSCJAG00000021320) #29	ENSCJAG00000083524	ENSCJAG00000073361 ##11	ENSCJAG00000071644
Mas night monkey	MODERN SPECIES	638	ECI2 (ENSANAG00000028772)	CDYL (ENSANAG00000023827) #7	RPP40 (ENSANAG00000029246) #8	LYRM4 (ENSANAG00000024664)	ENSANAG00000033127	FARS2 (ENSANAG00000019047) #12	NRN1 (ENSANAG00000026127) #13	F13A1 (ENSANAG00000035239) #14	LY86 (ENSANAG00000032464) #15	RREB1 (ENSANAG00000029040) #16	ENSANAG00000020451	SSR1 (ENSANAG00000025824) #17	CAGE1 (ENSANAG00000013827) #18	ENSANAG00000025110	RIOK1 (ENSANAG00000023777) #20	DSP (ENSANAG00000018959) #22	SNRNP48 (ENSANAG00000033538) #23	BMP6 (ENSANAG00000034623) #24	ENSANAG00000024409 #25	ENSANAG00000025516	BLOC1S5 (ENSANAG00000011549) #27	EEF1E1 (ENSANAG00000036153) #28	SLC35B3 (ENSANAG00000026451) #29	ENSANAG00000037088	ENSANAG00000022812 #32	TFAP2A (ENSANAG00000021127) #33	GCNT2 (ENSANAG00000033870) #35	C6orf52 (ENSANAG00000035732) #36	PAK1IP1 (ENSANAG00000027906)	ENSANAG00000026092	TMEM14B (ENSANAG00000020968)
Tarsier	MODERN SPECIES	6106															RIOK1 (ENSTSYG00000011368) #20	DSP (ENSTSYG00000004890) #22	SNRNP48 (ENSTSYG00000000698) #23	BMP6 (ENSTSYG00000003642) #24	ENSTSYG00000031269	TXNDC5 (ENSTSYG00000003650) #25
Strepsirrhini	ANCESTRAL SPECIES	29	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT01000000214902	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.o.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Lemuriformes	ANCESTRAL SPECIES	63	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.o.a	ENSGT00940000156581
Lemuriformes_a	ANCESTRAL SPECIES	207																ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.o.a	ENSGT00940000156581
Coquerels sifaka	MODERN SPECIES	164																DSP (ENSPCOG00000015346) #22	BMP6 (ENSPCOG00000026810) #24	TXNDC5 (ENSPCOG00000021911) #25	BLOC1S5 (ENSPCOG00000002289) #27	EEF1E1 (ENSPCOG00000018593) #28	TFAP2A (ENSPCOG00000021132) #33	GCNT2 (ENSPCOG00000002602) #35	ENSPCOG00000016759 #35
Greater bamboo lemur	MODERN SPECIES	447															ENSPSMG00000001988	DSP (ENSPSMG00000001911) #22	SNRNP48 (ENSPSMG00000001842) #23	BMP6 (ENSPSMG00000001796) #24	TXNDC5 (ENSPSMG00000001772) #25	BLOC1S5 (ENSPSMG00000001739) #27	EEF1E1 (ENSPSMG00000001700) #28	SLC35B3 (ENSPSMG00000001668) #29	ENSPSMG00000001640 #32	TFAP2A (ENSPSMG00000001613) #33
Mouse lemur	MODERN SPECIES	5	ENSMICG00000042252	HIVEP1 (ENSMICG00000032151)	TMEM170B (ENSMICG00000042371)	NEDD9 (ENSMICG00000017359)	SMIM13 (ENSMICG00000037605)	ENSMICG00000029333	ELOVL2 (ENSMICG00000031480)	SYCP2L (ENSMICG00000004241)	GCM2 (ENSMICG00000032859)	ENSMICG00000004474	ENSMICG00000013711	ENSMICG00000034173	SSR1 (ENSMICG00000047142) #17	CAGE1 (ENSMICG00000003644) #18	RIOK1 (ENSMICG00000044301) #20	DSP (ENSMICG00000012470) #22	SNRNP48 (ENSMICG00000012497) #23	BMP6 (ENSMICG00000005957) #24	ENSMICG00000005966 #25	BLOC1S5 (ENSMICG00000036195) #27	EEF1E1 (ENSMICG00000012636) #28	SLC35B3 (ENSMICG00000012644) #29	ENSMICG00000045779	TFAP2A (ENSMICG00000032580) #33	GCNT2 (ENSMICG00000011369) #35	C6orf52 (ENSMICG00000028261) #36	PAK1IP1 (ENSMICG00000004453)	ENSMICG00000043342	ENSMICG00000004469	ENSMICG00000000815	TRIM27 (ENSMICG00000000738)
Bushbaby	MODERN SPECIES	141	FAM217A (ENSOGAG00000011629)	ENSOGAG00000011631	ECI2 (ENSOGAG00000011635)	ENSOGAG00000015920 #7	RPP40 (ENSOGAG00000006055) #8	PPP1R3G (ENSOGAG00000034237)	ENSOGAG00000015193	FARS2 (ENSOGAG00000001040) #12	NRN1 (ENSOGAG00000027827) #13	F13A1 (ENSOGAG00000001042) #14	LY86 (ENSOGAG00000001044) #15	RREB1 (ENSOGAG00000025755) #16	SSR1 (ENSOGAG00000014234) #17	CAGE1 (ENSOGAG00000014237) #18	RIOK1 (ENSOGAG00000010192) #20	DSP (ENSOGAG00000005269) #22	SNRNP48 (ENSOGAG00000005275) #23	BMP6 (ENSOGAG00000031565) #24	TXNDC5 (ENSOGAG00000004292) #25	ENSOGAG00000025859	BLOC1S5 (ENSOGAG00000030827) #27	EEF1E1 (ENSOGAG00000000325) #28	SLC35B3 (ENSOGAG00000013090) #29	ENSOGAG00000001341 #32	TFAP2A (ENSOGAG00000003629) #33	ENSOGAG00000034522 #35	ENSOGAG00000012162	TMEM14C (ENSOGAG00000012165)	MAK (ENSOGAG00000028226)	GCM2 (ENSOGAG00000012176)	SYCP2L (ENSOGAG00000012181)
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Tree shrew	MODERN SPECIES	5872																DSP (ENSTBEG00000015020) #22	SNRNP48 (ENSTBEG00000015620) #23
Glires	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Lagomorpha	ANCESTRAL SPECIES	58	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Rabbit	MODERN SPECIES	3										ENSOCUG00000021436 #14	LY86 (ENSOCUG00000006381) #15	RREB1 (ENSOCUG00000022117) #16	SSR1 (ENSOCUG00000009083) #17	CAGE1 (ENSOCUG00000009089) #18	RIOK1 (ENSOCUG00000011824) #20	DSP (ENSOCUG00000013150) #22	SNRNP48 (ENSOCUG00000005168) #23	BMP6 (ENSOCUG00000003431) #24	TXNDC5 (ENSOCUG00000023055) #25	BLOC1S5 (ENSOCUG00000025755) #27	EEF1E1 (ENSOCUG00000012587) #28	ENSOCUG00000036458	SLC35B3 (ENSOCUG00000003401) #29	ENSOCUG00000025875	ENSOCUG00000022374	ENSOCUG00000030969	ENSOCUG00000016635 #32	ENSOCUG00000005315 #33	ENSOCUG00000022471	ENSOCUG00000036722 #35	ENSOCUG00000014369 #35
Pika	MODERN SPECIES	5178																DSP (ENSOPRG00000015413) #22	SNRNP48 (ENSOPRG00000015471) #23
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Kangaroo rat	MODERN SPECIES	351	Slc22a23 (ENSDORG00000010217)	ENSDORG00000010216	Tubb2b (ENSDORG00000029767)	ENSDORG00000025335	ENSDORG00000030064	Bphl (ENSDORG00000012891)	Lyrm4 (ENSDORG00000029399)	Fars2 (ENSDORG00000014796) #12	Nrn1 (ENSDORG00000028098) #13	F13a1 (ENSDORG00000005435) #14	Ly86 (ENSDORG00000009360) #15	Rreb1 (ENSDORG00000006979) #16	Ssr1 (ENSDORG00000009319) #17	Cage1 (ENSDORG00000004490) #18	Riok1 (ENSDORG00000008530) #20	Dsp (ENSDORG00000000359) #22	Snrnp48 (ENSDORG00000015140) #23	Bmp6 (ENSDORG00000004681) #24	Txndc5 (ENSDORG00000004682) #25	ENSDORG00000027767 #27	ENSDORG00000015077 #28	Slc35b3 (ENSDORG00000007915) #29	ENSDORG00000024425	Tfap2a (ENSDORG00000012263) #33	Gcnt2 (ENSDORG00000023790) #35	ENSDORG00000015069	Tmem14c (ENSDORG00000029428)	Mak (ENSDORG00000003520)	Gcm2 (ENSDORG00000002244)	ENSDORG00000002247	Elovl2 (ENSDORG00000013468)
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Lesser Egyptian jerboa	MODERN SPECIES	129	ENSJJAG00000010338	Tex56 (ENSJJAG00000008898)	ENSJJAG00000004231	ENSJJAG00000001626	Cdyl (ENSJJAG00000000586) #7	Rpp40 (ENSJJAG00000020629) #8	Lyrm4 (ENSJJAG00000004657)	Fars2 (ENSJJAG00000002799) #12	Nrn1 (ENSJJAG00000000725) #13	F13a1 (ENSJJAG00000000070) #14	Ly86 (ENSJJAG00000022504) #15	Rreb1 (ENSJJAG00000019738) #16	Ssr1 (ENSJJAG00000018495) #17	ENSJJAG00000017011 #18	Riok1 (ENSJJAG00000015152) #20	Dsp (ENSJJAG00000014255) #22	Snrnp48 (ENSJJAG00000011495) #23	Bmp6 (ENSJJAG00000002261) #24	Txndc5 (ENSJJAG00000022365) #25	Bloc1s5 (ENSJJAG00000020329) #27	Eef1e1 (ENSJJAG00000019293) #28	Slc35b3 (ENSJJAG00000018963) #29	Ofcc1 (ENSJJAG00000017086)	Tfap2a (ENSJJAG00000015163) #33
Muroidea	ANCESTRAL SPECIES	15	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00390000008360	ENSGT00940000155105.r	ENSGT00940000155105.q	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Cricetidae	ANCESTRAL SPECIES	22	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00940000155105.q	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772.x	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT00900000143353
Cricetinae	ANCESTRAL SPECIES	20	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00940000155105.q	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00700000106228	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000165524	ENSGT00390000001263	ENSGT00940000154772.w.a.a	ENSGT00940000156581	ENSGT00390000006777.b
Golden Hamster	MODERN SPECIES	623	Tex56 (ENSMAUG00000002707)	ENSMAUG00000001515	ENSMAUG00000020164	Cdyl (ENSMAUG00000011510) #7	Rpp40 (ENSMAUG00000010268) #8	Lyrm4 (ENSMAUG00000009051)	Fars2 (ENSMAUG00000008493) #12	Nrn1 (ENSMAUG00000008121) #13	F13a1 (ENSMAUG00000003924) #14	Ly86 (ENSMAUG00000002933) #15	ENSMAUG00000002202	Ssr1 (ENSMAUG00000001251) #17	Cage1 (ENSMAUG00000000989) #18	Riok1 (ENSMAUG00000012751) #20	ENSMAUG00000012558	Dsp (ENSMAUG00000012469) #22	Snrnp48 (ENSMAUG00000011944) #23	Bmp6 (ENSMAUG00000011185) #24	Txndc5 (ENSMAUG00000006635) #25	Bloc1s5 (ENSMAUG00000006022) #27	Eef1e1 (ENSMAUG00000005292) #28	Slc35b3 (ENSMAUG00000003904) #29	Ofcc1 (ENSMAUG00000001427)	ENSMAUG00000011635	ENSMAUG00000011470	Tfap2a (ENSMAUG00000015869) #33	Gcnt2 (ENSMAUG00000015681) #35	Gcm2 (ENSMAUG00000015036)	ENSMAUG00000013963	Elovl2 (ENSMAUG00000013398)	ENSMAUG00000013196
Chinese hamster chok1gshd	MODERN SPECIES	317	ENSCGRG00001021795	Cdyl (ENSCGRG00001002703) #7	ENSCGRG00001013878	Rpp40 (ENSCGRG00001018328) #8	Ppp1r3g (ENSCGRG00001001814)	Lyrm4 (ENSCGRG00001020406)	Fars2 (ENSCGRG00001022626) #12	ENSCGRG00001012890	Nrn1 (ENSCGRG00001017665) #13	F13a1 (ENSCGRG00001021633) #14	Ly86 (ENSCGRG00001014143) #15	Rreb1 (ENSCGRG00001019036) #16	Ssr1 (ENSCGRG00001024823) #17	Cage1 (ENSCGRG00001022830) #18	Riok1 (ENSCGRG00001018868) #20	Dsp (ENSCGRG00001022227) #22	ENSCGRG00001001076 #23	Bmp6 (ENSCGRG00001022962) #24	Txndc5 (ENSCGRG00001022611) #25	EEF1E1 (ENSCGRG00001017026) #27	ENSCGRG00001022699	Slc35b3 (ENSCGRG00001016228) #29	Ofcc1 (ENSCGRG00001020125)	ENSCGRG00001022144	Tfap2a (ENSCGRG00001009427) #33	ENSCGRG00001003056	ENSCGRG00001011065	Pak1ip1 (ENSCGRG00001006503)	ENSCGRG00001020757	Mak (ENSCGRG00001023197)	Gcm2 (ENSCGRG00001002518)
Cricetidae_B	ANCESTRAL SPECIES	22	ENSGT00390000008360	ENSGT00940000155105.r	ENSGT00940000155105.q	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772.x	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT00900000143353
Northern American deer mouse	MODERN SPECIES	18	Cdyl (ENSPEMG00000022690) #7	Rpp40 (ENSPEMG00000020809) #8	Ppp1r3g (ENSPEMG00000014441)	Lyrm4 (ENSPEMG00000030913)	Fars2 (ENSPEMG00000017477) #12	ENSPEMG00000028708	ENSPEMG00000029972	ENSPEMG00000027489	Nrn1 (ENSPEMG00000010532) #13	F13a1 (ENSPEMG00000016989) #14	Ly86 (ENSPEMG00000008759) #15	Rreb1 (ENSPEMG00000014153) #16	Ssr1 (ENSPEMG00000010303) #17	Cage1 (ENSPEMG00000008259) #18	Riok1 (ENSPEMG00000017844) #20	Dsp (ENSPEMG00000014596) #22	Snrnp48 (ENSPEMG00000008872) #23	Bmp6 (ENSPEMG00000014388) #24	Txndc5 (ENSPEMG00000009019) #25	Bloc1s5 (ENSPEMG00000030914) #27	Eef1e1 (ENSPEMG00000018182) #28	Slc35b3 (ENSPEMG00000001883) #29	Ofcc1 (ENSPEMG00000020547)	ENSPEMG00000022599	Tfap2a (ENSPEMG00000023144) #33	Gcnt2 (ENSPEMG00000029235) #35	Pak1ip1 (ENSPEMG00000016331)	ENSPEMG00000009538	Mak (ENSPEMG00000017417)	Gcm2 (ENSPEMG00000013000)	Sycp2l (ENSPEMG00000017765)
Prairie vole	MODERN SPECIES	3	ENSMOCG00000006528	ENSMOCG00000009658	Cdyl (ENSMOCG00000012115) #7	Rpp40 (ENSMOCG00000000305) #8	Ppp1r3g (ENSMOCG00000005122)	Lyrm4 (ENSMOCG00000015484)	Fars2 (ENSMOCG00000021203) #12	Nrn1 (ENSMOCG00000015236) #13	F13a1 (ENSMOCG00000018301) #14	ENSMOCG00000003554	Ly86 (ENSMOCG00000015534) #15	ENSMOCG00000014284	ENSMOCG00000014703 #17	Cage1 (ENSMOCG00000018199) #18	Riok1 (ENSMOCG00000017032) #20	Dsp (ENSMOCG00000001090) #22	Snrnp48 (ENSMOCG00000015555) #23	Bmp6 (ENSMOCG00000012416) #24	ENSMOCG00000017191 #25	Bloc1s5 (ENSMOCG00000020590) #27	Eef1e1 (ENSMOCG00000022997) #28	ENSMOCG00000002348	Slc35b3 (ENSMOCG00000016017) #29	Ofcc1 (ENSMOCG00000022206)	Tfap2a (ENSMOCG00000019783) #33	Gcnt2 (ENSMOCG00000012916) #35	Pak1ip1 (ENSMOCG00000006443)	Tmem14c (ENSMOCG00000000677)	Mak (ENSMOCG00000017296)	Gcm2 (ENSMOCG00000000782)	ENSMOCG00000002808
Murinae	ANCESTRAL SPECIES	21	ENSGT00390000008360	ENSGT00940000155105.r	ENSGT00940000155105.q	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Mus	ANCESTRAL SPECIES	18	ENSGT00390000008360	ENSGT00940000155105.q.b	ENSGT00940000155105.q.a	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Mus_A	ANCESTRAL SPECIES	14	ENSGT00390000008360	ENSGT00940000155105.q.b	ENSGT00940000155105.q.a	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Mus_B	ANCESTRAL SPECIES	13	ENSGT00390000008360	ENSGT00940000155105.q.b	ENSGT00940000155105.q.a	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Mus_C	ANCESTRAL SPECIES	10	ENSGT00390000008360	ENSGT00940000155105.q.b	ENSGT00940000155105.q.a	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
spretus	MODERN SPECIES	4	MGP_SPRETEiJ_G0019305	MGP_SPRETEiJ_G0019306	MGP_SPRETEiJ_G0019307	Cdyl (MGP_SPRETEiJ_G0019308) #7	Rpp40 (MGP_SPRETEiJ_G0019309) #8	Ppp1r3g (MGP_SPRETEiJ_G0019310)	Lyrm4 (MGP_SPRETEiJ_G0019311)	Fars2 (MGP_SPRETEiJ_G0019312) #12	Nrn1 (MGP_SPRETEiJ_G0019313) #13	F13a1 (MGP_SPRETEiJ_G0019314) #14	Ly86 (MGP_SPRETEiJ_G0019315) #15	Rreb1 (MGP_SPRETEiJ_G0019316) #16	Ssr1 (MGP_SPRETEiJ_G0019317) #17	Cage1 (MGP_SPRETEiJ_G0019318) #18	Riok1 (MGP_SPRETEiJ_G0019319) #20	Dsp (MGP_SPRETEiJ_G0019320) #22	Snrnp48 (MGP_SPRETEiJ_G0019321) #23	Bmp6 (MGP_SPRETEiJ_G0019322) #24	Txndc5 (MGP_SPRETEiJ_G0019323) #25	Bloc1s5 (MGP_SPRETEiJ_G0019324) #27	Slc35b3 (MGP_SPRETEiJ_G0019325) #29	Ofcc1 (MGP_SPRETEiJ_G0019326)	MGP_SPRETEiJ_G0019327	Tfap2a (MGP_SPRETEiJ_G0019328) #33	MGP_SPRETEiJ_G0019329	Pak1ip1 (MGP_SPRETEiJ_G0019330)	Tmem14c (MGP_SPRETEiJ_G0019331)	Mak (MGP_SPRETEiJ_G0019332)	Gcm2 (MGP_SPRETEiJ_G0019333)	Elovl2 (MGP_SPRETEiJ_G0019335)	Smim13 (MGP_SPRETEiJ_G0019336)
Steppe mouse	MODERN SPECIES	3420									Nrn1 (ENSMSIG00000030265) #13	F13a1 (ENSMSIG00000030273) #14	ENSMSIG00000030279 #15	Rreb1 (ENSMSIG00000030286) #16	Ssr1 (ENSMSIG00000002117) #17	Cage1 (ENSMSIG00000002367) #18	Riok1 (ENSMSIG00000002490) #20	Dsp (ENSMSIG00000002602) #22	Snrnp48 (ENSMSIG00000002687) #23	Bmp6 (ENSMSIG00000002718) #24	Txndc5 (ENSMSIG00000002766) #25	Bloc1s5 (ENSMSIG00000002907) #27	ENSMSIG00000002981 #28	Slc35b3 (ENSMSIG00000003005) #29	ENSMSIG00000003112	ENSMSIG00000003171 #32	Tfap2a (ENSMSIG00000003209) #33	ENSMSIG00000003566	ENSMSIG00000003578	Pak1ip1 (ENSMSIG00000003627)	Tmem14c (ENSMSIG00000003687)	Mak (ENSMSIG00000003703)	Gcm2 (ENSMSIG00000004008)
Mouse	MODERN SPECIES	4	Tex56 (ENSMUSG00000021415)	Eci3 (ENSMUSG00000021416)	Eci2 (ENSMUSG00000021417)	Cdyl (ENSMUSG00000059288) #7	Rpp40 (ENSMUSG00000021418) #8	Ppp1r3g (ENSMUSG00000050423)	Lyrm4 (ENSMUSG00000046573)	Fars2 (ENSMUSG00000021420) #12	Nrn1 (ENSMUSG00000039114) #13	F13a1 (ENSMUSG00000039109) #14	Ly86 (ENSMUSG00000021423) #15	Rreb1 (ENSMUSG00000039087) #16	Ssr1 (ENSMUSG00000021427) #17	Cage1 (ENSMUSG00000044566) #18	Riok1 (ENSMUSG00000021428) #20	Dsp (ENSMUSG00000054889) #22	Snrnp48 (ENSMUSG00000021431) #23	Bmp6 (ENSMUSG00000039004) #24	Txndc5 (ENSMUSG00000038991) #25	Bloc1s5 (ENSMUSG00000038982) #27	Eef1e1 (ENSMUSG00000001707) #28	Slc35b3 (ENSMUSG00000021432) #29	Ofcc1 (ENSMUSG00000047094)	Tfap2a (ENSMUSG00000021359) #33	Gcnt2 (ENSMUSG00000021360) #35	Pak1ip1 (ENSMUSG00000038683)	Tmem14c (ENSMUSG00000021361)	Mak (ENSMUSG00000021363)	Gcm2 (ENSMUSG00000021362)	Sycp2l (ENSMUSG00000038651)	Elovl2 (ENSMUSG00000021364)
Ryukyu mouse	MODERN SPECIES	4	Tex56 (MGP_CAROLIEiJ_G0018425)	Eci3 (MGP_CAROLIEiJ_G0018426)	Eci2 (MGP_CAROLIEiJ_G0018427)	Cdyl (MGP_CAROLIEiJ_G0018428) #7	Rpp40 (MGP_CAROLIEiJ_G0018429) #8	Ppp1r3g (MGP_CAROLIEiJ_G0018430)	Lyrm4 (MGP_CAROLIEiJ_G0018431)	Fars2 (MGP_CAROLIEiJ_G0018432) #12	Nrn1 (MGP_CAROLIEiJ_G0018433) #13	F13a1 (MGP_CAROLIEiJ_G0018434) #14	Ly86 (MGP_CAROLIEiJ_G0018435) #15	Rreb1 (MGP_CAROLIEiJ_G0018436) #16	Ssr1 (MGP_CAROLIEiJ_G0018437) #17	Cage1 (MGP_CAROLIEiJ_G0018438) #18	Riok1 (MGP_CAROLIEiJ_G0018439) #20	Dsp (MGP_CAROLIEiJ_G0018440) #22	Snrnp48 (MGP_CAROLIEiJ_G0018441) #23	Bmp6 (MGP_CAROLIEiJ_G0018442) #24	Txndc5 (MGP_CAROLIEiJ_G0018443) #25	Bloc1s5 (MGP_CAROLIEiJ_G0018444) #27	Eef1e1 (MGP_CAROLIEiJ_G0018445) #28	Slc35b3 (MGP_CAROLIEiJ_G0018446) #29	Ofcc1 (MGP_CAROLIEiJ_G0018447)	MGP_CAROLIEiJ_G0018448	Tfap2a (MGP_CAROLIEiJ_G0018449) #33	MGP_CAROLIEiJ_G0018450	Pak1ip1 (MGP_CAROLIEiJ_G0018451)	Tmem14c (MGP_CAROLIEiJ_G0018452)	Mak (MGP_CAROLIEiJ_G0018453)	Gcm2 (MGP_CAROLIEiJ_G0018454)	MGP_CAROLIEiJ_G0018455
Shrew mouse	MODERN SPECIES	7	Tex56 (MGP_PahariEiJ_G0019493)	Eci3 (MGP_PahariEiJ_G0019494)	Eci2 (MGP_PahariEiJ_G0019495)	Cdyl (MGP_PahariEiJ_G0019496) #7	Rpp40 (MGP_PahariEiJ_G0019497) #8	Ppp1r3g (MGP_PahariEiJ_G0019498)	Lyrm4 (MGP_PahariEiJ_G0019499)	Fars2 (MGP_PahariEiJ_G0019500) #12	Nrn1 (MGP_PahariEiJ_G0019501) #13	F13a1 (MGP_PahariEiJ_G0019502) #14	Ly86 (MGP_PahariEiJ_G0019503) #15	Rreb1 (MGP_PahariEiJ_G0019504) #16	Ssr1 (MGP_PahariEiJ_G0019505) #17	Cage1 (MGP_PahariEiJ_G0019506) #18	Riok1 (MGP_PahariEiJ_G0019507) #20	Dsp (MGP_PahariEiJ_G0019508) #22	Snrnp48 (MGP_PahariEiJ_G0019509) #23	Bmp6 (MGP_PahariEiJ_G0019510) #24	Txndc5 (MGP_PahariEiJ_G0019511) #25	Bloc1s5 (MGP_PahariEiJ_G0019512) #27	Eef1e1 (MGP_PahariEiJ_G0019513) #28	Slc35b3 (MGP_PahariEiJ_G0019514) #29	Ofcc1 (MGP_PahariEiJ_G0019515)	MGP_PahariEiJ_G0019516	Tfap2a (MGP_PahariEiJ_G0019517) #33	MGP_PahariEiJ_G0019518	Pak1ip1 (MGP_PahariEiJ_G0019519)	Tmem14c (MGP_PahariEiJ_G0019520)	Mak (MGP_PahariEiJ_G0019521)	Gcm2 (MGP_PahariEiJ_G0019522)	MGP_PahariEiJ_G0019523
Rat	MODERN SPECIES	8	Eci3 (ENSRNOG00000029549)	Eci2 (ENSRNOG00000066714)	Cdyl (ENSRNOG00000032215) #7	Rpp40 (ENSRNOG00000016226) #8	Ppp1r3g (ENSRNOG00000016222)	Lyrm4 (ENSRNOG00000047970)	Fars2 (ENSRNOG00000016135) #12	Nrn1 (ENSRNOG00000050767) #13	F13a1 (ENSRNOG00000015957) #14	Ly86 (ENSRNOG00000000137) #15	RGD1563601 (ENSRNOG00000031706)	Rreb1 (ENSRNOG00000015701) #16	Ssr1 (ENSRNOG00000014165) #17	Cage1 (ENSRNOG00000024111) #18	Riok1 (ENSRNOG00000014049) #20	Dsp (ENSRNOG00000013928) #22	Snrnp48 (ENSRNOG00000013756) #23	Bmp6 (ENSRNOG00000013717) #24	Txndc5 (ENSRNOG00000013469) #25	Bloc1s5 (ENSRNOG00000016497) #27	Eef1e1 (ENSRNOG00000066344) #28	Pole3-ps2 (ENSRNOG00000047910)	Slc35b3 (ENSRNOG00000016174) #29	Ofcc1 (ENSRNOG00000024499)	AABR07027339.1 (ENSRNOG00000059019) #32	LOC100362620 (ENSRNOG00000051034)	Tfap2a (ENSRNOG00000015522) #33	Gcnt2 (ENSRNOG00000023778) #35	C17h6orf52 (ENSRNOG00000039379) #36	Pak1ip1 (ENSRNOG00000023799)	Tmem14c (ENSRNOG00000015437)
Upper Galilee mountains blind mole rat	MODERN SPECIES	764	Fam50b (ENSNGAG00000024017)	ENSNGAG00000009942	Prpf4b (ENSNGAG00000023322)	ENSNGAG00000020575	Cdyl (ENSNGAG00000023764) #7	ENSNGAG00000023955 #8	Lyrm4 (ENSNGAG00000024207)	Fars2 (ENSNGAG00000021589) #12	Nrn1 (ENSNGAG00000018954) #13	F13a1 (ENSNGAG00000022897) #14	Ly86 (ENSNGAG00000011116) #15	Rreb1 (ENSNGAG00000021506) #16	Ssr1 (ENSNGAG00000021960) #17	Cage1 (ENSNGAG00000021871) #18	Riok1 (ENSNGAG00000021734) #20	Dsp (ENSNGAG00000020849) #22	Snrnp48 (ENSNGAG00000004849) #23	Bmp6 (ENSNGAG00000013966) #24	Txndc5 (ENSNGAG00000019460) #25	Bloc1s5 (ENSNGAG00000012995) #27	Eef1e1 (ENSNGAG00000005143) #28	Slc35b3 (ENSNGAG00000022583) #29	Ofcc1 (ENSNGAG00000002244)	Tfap2a (ENSNGAG00000023563) #33	Gcnt2 (ENSNGAG00000016858) #35	Pak1ip1 (ENSNGAG00000017816)	ENSNGAG00000020832	Mak (ENSNGAG00000023440)	Gcm2 (ENSNGAG00000001132)	ENSNGAG00000023463	Elovl2 (ENSNGAG00000005955)
Rodentia_A	ANCESTRAL SPECIES	26	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Hystricomorpha	ANCESTRAL SPECIES	42	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Hystricomorpha_a	ANCESTRAL SPECIES	48	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Hystricomorpha_b	ANCESTRAL SPECIES	58	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000157289.a	ENSGT00940000170978	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Long-tailed chinchilla	MODERN SPECIES	172	FAM217A (ENSCLAG00000004051)	ENSCLAG00000003863	ECI2 (ENSCLAG00000003560)	CDYL (ENSCLAG00000003356) #7	RPP40 (ENSCLAG00000003235) #8	PPP1R3G (ENSCLAG00000012673)	ENSCLAG00000011017	FARS2 (ENSCLAG00000017316) #12	NRN1 (ENSCLAG00000011260) #13	F13A1 (ENSCLAG00000003000) #14	LY86 (ENSCLAG00000002671) #15	RREB1 (ENSCLAG00000005266) #16	SSR1 (ENSCLAG00000004188) #17	CAGE1 (ENSCLAG00000003891) #18	RIOK1 (ENSCLAG00000003522) #20	DSP (ENSCLAG00000004641) #22	SNRNP48 (ENSCLAG00000003765) #23	BMP6 (ENSCLAG00000002609) #24	TXNDC5 (ENSCLAG00000002251) #25	BLOC1S5 (ENSCLAG00000001975) #27	EEF1E1 (ENSCLAG00000001917) #28	SLC35B3 (ENSCLAG00000006683) #29	ENSCLAG00000005976	ENSCLAG00000005254	TFAP2A (ENSCLAG00000004001) #33	GCNT2 (ENSCLAG00000003303) #35	ENSCLAG00000003049	PAK1IP1 (ENSCLAG00000002755)	TMEM14C (ENSCLAG00000002593)	MAK (ENSCLAG00000002930)	GCM2 (ENSCLAG00000002483)
Degu	MODERN SPECIES	64	FAM217A (ENSODEG00000006489)	ECI2 (ENSODEG00000007068)	ENSODEG00000019345	CDYL (ENSODEG00000006073) #7	ENSODEG00000006170 #8	LYRM4 (ENSODEG00000005678)	ENSODEG00000019555	FARS2 (ENSODEG00000006881) #12	NRN1 (ENSODEG00000006426) #13	F13A1 (ENSODEG00000006301) #14	LY86 (ENSODEG00000005843) #15	RREB1 (ENSODEG00000007124) #16	SSR1 (ENSODEG00000008229) #17	CAGE1 (ENSODEG00000006091) #18	RIOK1 (ENSODEG00000005663) #20	DSP (ENSODEG00000005713) #22	ENSODEG00000005816 #23	BMP6 (ENSODEG00000005281) #24	ENSODEG00000006265 #25	BLOC1S5 (ENSODEG00000006076) #27	ENSODEG00000005927 #28	SLC35B3 (ENSODEG00000007641) #29	ENSODEG00000007038	ENSODEG00000005512	TFAP2A (ENSODEG00000005218) #33	GCNT2 (ENSODEG00000007522) #35	PAK1IP1 (ENSODEG00000005826)	ENSODEG00000005403	MAK (ENSODEG00000006066)	GCM2 (ENSODEG00000005824)	ENSODEG00000005423
Guinea pig	MODERN SPECIES	38	FAM50B (ENSCPOG00000000148)	PRPF4B (ENSCPOG00000004775)	ECI2 (ENSCPOG00000004788)	CDYL (ENSCPOG00000005847) #7	RPP40 (ENSCPOG00000005855) #8	LYRM4 (ENSCPOG00000038899)	FARS2 (ENSCPOG00000003994) #12	NRN1 (ENSCPOG00000021547) #13	F13A1 (ENSCPOG00000005276) #14	LY86 (ENSCPOG00000012001) #15	RREB1 (ENSCPOG00000014380) #16	SSR1 (ENSCPOG00000039953) #17	CAGE1 (ENSCPOG00000009875) #18	ENSCPOG00000036973	RIOK1 (ENSCPOG00000009882) #20	DSP (ENSCPOG00000007895) #22	SNRNP48 (ENSCPOG00000007910) #23	BMP6 (ENSCPOG00000014575) #24	TXNDC5 (ENSCPOG00000014577) #25	BLOC1S5 (ENSCPOG00000038757) #27	EEF1E1 (ENSCPOG00000032494) #28	SLC35B3 (ENSCPOG00000010313) #29	ENSCPOG00000031842	TFAP2A (ENSCPOG00000000121) #33	GCNT2 (ENSCPOG00000033639) #35	PAK1IP1 (ENSCPOG00000035088)	TMEM14C (ENSCPOG00000007383)	MAK (ENSCPOG00000001694)	GCM2 (ENSCPOG00000011254)	ENSCPOG00000011255	ELOVL2 (ENSCPOG00000008140)
Naked mole-rat female	MODERN SPECIES	28	PPP1R3G (ENSHGLG00000041006)	ENSHGLG00000038262	ENSHGLG00000004389 #12	ENSHGLG00000020343	ENSHGLG00000036093	ENSHGLG00000049115	ENSHGLG00000035907	ENSHGLG00000035488 #13	ENSHGLG00000034596	ENSHGLG00000004262 #14	LY86 (ENSHGLG00000004184) #15	RREB1 (ENSHGLG00000015266) #16	SSR1 (ENSHGLG00000009378) #17	CAGE1 (ENSHGLG00000009035) #18	RIOK1 (ENSHGLG00000008699) #20	DSP (ENSHGLG00000008359) #22	ENSHGLG00000045182	SNRNP48 (ENSHGLG00000015241) #23	BMP6 (ENSHGLG00000015229) #24	TXNDC5 (ENSHGLG00000019336) #25	BLOC1S5 (ENSHGLG00000050190) #27	EEF1E1 (ENSHGLG00000051014) #28	ENSHGLG00000017811	SLC35B3 (ENSHGLG00000017775) #29	ENSHGLG00000035290	ENSHGLG00000044940 #32	ENSHGLG00000032559	TFAP2A (ENSHGLG00000039316) #33	ENSHGLG00000041562 #35	C6orf52 (ENSHGLG00000017556) #36	PAK1IP1 (ENSHGLG00000048467)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.cb	ENSGT00940000156581	ENSGT00390000006777.b
Marmotini	ANCESTRAL SPECIES	40	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.cb	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Marmotini_b	ANCESTRAL SPECIES	68	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772.cb	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Squirrel	MODERN SPECIES	134	FAM217A (ENSSTOG00000030768)	ENSSTOG00000030065	ECI2 (ENSSTOG00000004305)	CDYL (ENSSTOG00000011187) #7	RPP40 (ENSSTOG00000011199) #8	PPP1R3G (ENSSTOG00000021636)	LYRM4 (ENSSTOG00000026736)	FARS2 (ENSSTOG00000012156) #12	ENSSTOG00000024647 #13	F13A1 (ENSSTOG00000003326) #14	LY86 (ENSSTOG00000015443) #15	RREB1 (ENSSTOG00000020497) #16	ENSSTOG00000022608 #17	CAGE1 (ENSSTOG00000009267) #18	RIOK1 (ENSSTOG00000009289) #20	DSP (ENSSTOG00000014616) #22	SNRNP48 (ENSSTOG00000014635) #23	BMP6 (ENSSTOG00000028916) #24	TXNDC5 (ENSSTOG00000019465) #25	BLOC1S5 (ENSSTOG00000027342) #27	EEF1E1 (ENSSTOG00000026617) #28	SLC35B3 (ENSSTOG00000001201) #29	ENSSTOG00000028175	ENSSTOG00000014334	TFAP2A (ENSSTOG00000019865) #33	GCNT2 (ENSSTOG00000025970) #35	PAK1IP1 (ENSSTOG00000027900)	ENSSTOG00000022833	MAK (ENSSTOG00000009548)	GCM2 (ENSSTOG00000009563)	ENSSTOG00000009224
Arctic ground squirrel	MODERN SPECIES	31												ENSUPAG00010014689 #16	SSR1 (ENSUPAG00010014698) #17	CAGE1 (ENSUPAG00010014747) #18	RIOK1 (ENSUPAG00010014798) #20	DSP (ENSUPAG00010015511) #22	SNRNP48 (ENSUPAG00010015572) #23	BMP6 (ENSUPAG00010015582) #24	TXNDC5 (ENSUPAG00010015593) #25	BLOC1S5 (ENSUPAG00010015784) #27	SLC35B3 (ENSUPAG00010015809) #29	ENSUPAG00010015840	ENSUPAG00010015910	TFAP2A (ENSUPAG00010015928) #33	GCNT2 (ENSUPAG00010016009) #35	PAK1IP1 (ENSUPAG00010016032)	TMEM14C (ENSUPAG00010016057)	MAK (ENSUPAG00010016076)	GCM2 (ENSUPAG00010016186)	ELOVL2 (ENSUPAG00010016252)	SMIM13 (ENSUPAG00010016295)
Alpin marmot	MODERN SPECIES	36	FAM217A (ENSMMMG00000014281)	ENSMMMG00000014296	ECI2 (ENSMMMG00000014301)	CDYL (ENSMMMG00000014357) #7	RPP40 (ENSMMMG00000014521) #8	PPP1R3G (ENSMMMG00000014548)	LYRM4 (ENSMMMG00000014551)	FARS2 (ENSMMMG00000014567) #12	NRN1 (ENSMMMG00000014586) #13	F13A1 (ENSMMMG00000014594) #14	LY86 (ENSMMMG00000014644) #15	RREB1 (ENSMMMG00000014665) #16	SSR1 (ENSMMMG00000014761) #17	CAGE1 (ENSMMMG00000014786) #18	RIOK1 (ENSMMMG00000014815) #20	DSP (ENSMMMG00000014849) #22	SNRNP48 (ENSMMMG00000014886) #23	BMP6 (ENSMMMG00000014898) #24	TXNDC5 (ENSMMMG00000014905) #25	BLOC1S5 (ENSMMMG00000014923) #27	EEF1E1 (ENSMMMG00000014929) #28	SLC35B3 (ENSMMMG00000014936) #29	ENSMMMG00000014956	ENSMMMG00000014969	ENSMMMG00000014989	TFAP2A (ENSMMMG00000014996) #33	ENSMMMG00000015030	GCNT2 (ENSMMMG00000015036) #35	ENSMMMG00000015056	C6orf52 (ENSMMMG00000015079) #36	PAK1IP1 (ENSMMMG00000015091)
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005007999	ECI2 (ENSSVLG00005008033)	CDYL (ENSSVLG00005008158) #7	RPP40 (ENSSVLG00005008216) #8	PPP1R3G (ENSSVLG00005008297)	LYRM4 (ENSSVLG00005008312)	ENSSVLG00005008346	FARS2 (ENSSVLG00005008373) #12	NRN1 (ENSSVLG00005008393) #13	F13A1 (ENSSVLG00005008423) #14	LY86 (ENSSVLG00005008500) #15	RREB1 (ENSSVLG00005008541) #16	SSR1 (ENSSVLG00005008603) #17	CAGE1 (ENSSVLG00005008923) #18	RIOK1 (ENSSVLG00005009274) #20	DSP (ENSSVLG00005009323) #22	SNRNP48 (ENSSVLG00005009588) #23	BMP6 (ENSSVLG00005009631) #24	TXNDC5 (ENSSVLG00005009663) #25	BLOC1S5 (ENSSVLG00005009718) #27	ENSSVLG00005009767 #28	ENSSVLG00005009805 #29	ENSSVLG00005009939 #29	ENSSVLG00005010019	ENSSVLG00005010165	TFAP2A (ENSSVLG00005010218) #33	GCNT2 (ENSSVLG00005010366) #35	ENSSVLG00005010435	PAK1IP1 (ENSSVLG00005010469)	ENSSVLG00005010503	MAK (ENSSVLG00005010599)
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000154843.F #22
Hedgehog	MODERN SPECIES	293																DSP (ENSEEUG00000014214) #22
Common shrew	MODERN SPECIES	7365																ENSSARG00000005433 #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581	ENSGT00390000006777.b
Caniformia_b	ANCESTRAL SPECIES	31	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Ursidae	ANCESTRAL SPECIES	39	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b.x #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564.c #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Ursus	ANCESTRAL SPECIES	34	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00390000008828	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b.x #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564.c #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
American black bear	MODERN SPECIES	887												RREB1 (ENSUAMG00000003741) #16	SSR1 (ENSUAMG00000003731) #17	CAGE1 (ENSUAMG00000003726) #18	RIOK1 (ENSUAMG00000003721) #20	DSP (ENSUAMG00000003703) #22	SNRNP48 (ENSUAMG00000003690) #23
Polar bear	MODERN SPECIES	181	ENSUMAG00000018677	ECI2 (ENSUMAG00000018673)	ENSUMAG00000018660	CDYL (ENSUMAG00000018648) #7	RPP40 (ENSUMAG00000018639) #8	LYRM4 (ENSUMAG00000018628)	FARS2 (ENSUMAG00000018618) #12	NRN1 (ENSUMAG00000018605) #13	F13A1 (ENSUMAG00000018590) #14	LY86 (ENSUMAG00000018575) #15	ENSUMAG00000018533	RREB1 (ENSUMAG00000018518) #16	SSR1 (ENSUMAG00000018496) #17	CAGE1 (ENSUMAG00000018479) #18	RIOK1 (ENSUMAG00000018461) #20	DSP (ENSUMAG00000018421) #22	SNRNP48 (ENSUMAG00000018412) #23	BMP6 (ENSUMAG00000018382) #24	TXNDC5 (ENSUMAG00000018348) #25	BLOC1S5 (ENSUMAG00000018332) #27	EEF1E1 (ENSUMAG00000018315) #28	SLC35B3 (ENSUMAG00000018287) #29	ENSUMAG00000018244	TFAP2A (ENSUMAG00000018225) #33	GCNT2 (ENSUMAG00000018217) #35	ENSUMAG00000018208 #35	PAK1IP1 (ENSUMAG00000018192)	MAK (ENSUMAG00000018146)	ENSUMAG00000018129	GCM2 (ENSUMAG00000018112)	SYCP2L (ENSUMAG00000018088)
Giant Panda	MODERN SPECIES	15	ENSAMEG00000012884	ECI2 (ENSAMEG00000012888)	ENSAMEG00000012910	CDYL (ENSAMEG00000012914) #7	RPP40 (ENSAMEG00000012938) #8	PPP1R3G (ENSAMEG00000025070)	LYRM4 (ENSAMEG00000017445)	FARS2 (ENSAMEG00000027009) #12	NRN1 (ENSAMEG00000024302) #13	F13A1 (ENSAMEG00000017422) #14	LY86 (ENSAMEG00000017416) #15	RREB1 (ENSAMEG00000017412) #16	SSR1 (ENSAMEG00000017395) #17	CAGE1 (ENSAMEG00000017391) #18	RIOK1 (ENSAMEG00000017367) #20	DSP (ENSAMEG00000017354) #22	SNRNP48 (ENSAMEG00000017349) #23	TXNDC5 (ENSAMEG00000017328) #25	BLOC1S5 (ENSAMEG00000017324) #27	EEF1E1 (ENSAMEG00000028089) #28	SLC35B3 (ENSAMEG00000017311) #29	TFAP2A (ENSAMEG00000002558) #33	GCNT2 (ENSAMEG00000002573) #35	C6orf52 (ENSAMEG00000030969) #36	PAK1IP1 (ENSAMEG00000002587)	TMEM14C (ENSAMEG00000002614)	MAK (ENSAMEG00000002619)	GCM2 (ENSAMEG00000002669)	SYCP2L (ENSAMEG00000002681)	ELOVL2 (ENSAMEG00000002691)	SMIM13 (ENSAMEG00000027307)
Mustelinae	ANCESTRAL SPECIES	42	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.g.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
American mink	MODERN SPECIES	362										LY86 (ENSNVIG00000019168) #15	ENSNVIG00000019188	RREB1 (ENSNVIG00000019201) #16	SSR1 (ENSNVIG00000019269) #17	CAGE1 (ENSNVIG00000019361) #18	RIOK1 (ENSNVIG00000019396) #20	DSP (ENSNVIG00000019457) #22	SNRNP48 (ENSNVIG00000019527) #23	ENSNVIG00000019555
Ferret	MODERN SPECIES	202	CDYL (ENSMPUG00000000521) #7	RPP40 (ENSMPUG00000000530) #8	LYRM4 (ENSMPUG00000000532)	FARS2 (ENSMPUG00000000534) #12	ENSMPUG00000000537	ENSMPUG00000000540 #13	ENSMPUG00000000541	F13A1 (ENSMPUG00000000546) #14	LY86 (ENSMPUG00000000552) #15	ENSMPUG00000000556	RREB1 (ENSMPUG00000000558) #16	SSR1 (ENSMPUG00000000560) #17	CAGE1 (ENSMPUG00000000561) #18	RIOK1 (ENSMPUG00000000570) #20	ENSMPUG00000000576	DSP (ENSMPUG00000000577) #22	SNRNP48 (ENSMPUG00000000580) #23	BMP6 (ENSMPUG00000000583) #24	BLOC1S5 (ENSMPUG00000000585) #27	TXNDC5 (ENSMPUG00000000586) #25	EEF1E1 (ENSMPUG00000000588) #28	ENSMPUG00000000591	SLC35B3 (ENSMPUG00000000592) #29	ENSMPUG00000000594	TFAP2A (ENSMPUG00000000601) #33	GCNT2 (ENSMPUG00000000603) #35	C6orf52 (ENSMPUG00000000606) #36	PAK1IP1 (ENSMPUG00000000610)	TMEM14C (ENSMPUG00000000613)	MAK (ENSMPUG00000000627)	GCM2 (ENSMPUG00000000633)
Canidae	ANCESTRAL SPECIES	48	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581	ENSGT00390000006777.b
Canis_lupus	ANCESTRAL SPECIES	36	ENSGT00390000008360	ENSGT00940000155105	ENSGT00980000203340	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00390000000111.b.b.f	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.h	ENSGT00940000156581	ENSGT00390000006777.b
Dingo	MODERN SPECIES	411	ECI2 (ENSCAFG00020013391)	ENSCAFG00020013385	CDYL (ENSCAFG00020013382) #7	RPP40 (ENSCAFG00020013380) #8	ENSCAFG00020013366	LYRM4 (ENSCAFG00020013362)	FARS2 (ENSCAFG00020013360) #12	NRN1 (ENSCAFG00020013359) #13	F13A1 (ENSCAFG00020013298) #14	LY86 (ENSCAFG00020013271) #15	RREB1 (ENSCAFG00020013260) #16	SSR1 (ENSCAFG00020013255) #17	CAGE1 (ENSCAFG00020013236) #18	RIOK1 (ENSCAFG00020013233) #20	ENSCAFG00020013228	DSP (ENSCAFG00020013206) #22	SNRNP48 (ENSCAFG00020013203) #23	BMP6 (ENSCAFG00020013201) #24	TXNDC5 (ENSCAFG00020013200) #25	BLOC1S5 (ENSCAFG00020013196) #27	ENSCAFG00020013193	EEF1E1 (ENSCAFG00020013190) #28	ENSCAFG00020013187	SLC35B3 (ENSCAFG00020013184) #29	ENSCAFG00020013183	ENSCAFG00020013174	TFAP2A (ENSCAFG00020013147) #33	GCNT2 (ENSCAFG00020013139) #35	ENSCAFG00020013137 #35	ENSCAFG00020013135 #36	PAK1IP1 (ENSCAFG00020013125)
Dog	MODERN SPECIES	28	ECI2 (ENSCAFG00845018709)	ENSCAFG00845018833	CDYL (ENSCAFG00845018889) #7	RPP40 (ENSCAFG00845018947) #8	ENSCAFG00845019068	LYRM4 (ENSCAFG00845019185)	FARS2 (ENSCAFG00845019317) #12	NRN1 (ENSCAFG00845015882) #13	F13A1 (ENSCAFG00845015958) #14	LY86 (ENSCAFG00845016254) #15	RREB1 (ENSCAFG00845016516) #16	SSR1 (ENSCAFG00845016889) #17	CAGE1 (ENSCAFG00845017003) #18	RIOK1 (ENSCAFG00845017166) #20	ENSCAFG00845017231	DSP (ENSCAFG00845017273) #22	SNRNP48 (ENSCAFG00845017442) #23	BMP6 (ENSCAFG00845017586) #24	ENSCAFG00845017833 #25	BLOC1S5 (ENSCAFG00845018047) #27	EEF1E1 (ENSCAFG00845018087) #28	ENSCAFG00845018125	ENSCAFG00845018157	SLC35B3 (ENSCAFG00845018313) #29	ENSCAFG00845018729	ENSCAFG00845018795	ENSCAFG00845018859	TFAP2A (ENSCAFG00845019098) #33	GCNT2 (ENSCAFG00845019386) #35	ENSCAFG00845019493	PAK1IP1 (ENSCAFG00845019576)
Red fox	MODERN SPECIES	30										LY86 (ENSVVUG00000005083) #15	RREB1 (ENSVVUG00000005050) #16	SSR1 (ENSVVUG00000005040) #17	CAGE1 (ENSVVUG00000005033) #18	RIOK1 (ENSVVUG00000005018) #20	ENSVVUG00000005013	DSP (ENSVVUG00000004999) #22	SNRNP48 (ENSVVUG00000004996) #23	BMP6 (ENSVVUG00000004463) #24	TXNDC5 (ENSVVUG00000004401) #25	BLOC1S5 (ENSVVUG00000004385) #27	ENSVVUG00000004381	EEF1E1 (ENSVVUG00000004379) #28	SLC35B3 (ENSVVUG00000004364) #29	ENSVVUG00000004322	ENSVVUG00000004301 #32	TFAP2A (ENSVVUG00000004244) #33	GCNT2 (ENSVVUG00000004235) #35	ENSVVUG00000004231 #35	C6orf52 (ENSVVUG00000004220) #36	PAK1IP1 (ENSVVUG00000004210)	TMEM14C (ENSVVUG00000004187)
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.g.b.b	ENSGT00940000156581
Panthera	ANCESTRAL SPECIES	30	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564.e #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.g.b.b	ENSGT00940000156581
Tiger	MODERN SPECIES	15	PRPF4B (ENSPTIG00000013243)	FAM217A (ENSPTIG00000011724)	ENSPTIG00000011297	ECI2 (ENSPTIG00000007246)	CDYL (ENSPTIG00000004597) #7	RPP40 (ENSPTIG00000018847) #8	LYRM4 (ENSPTIG00000018145)	FARS2 (ENSPTIG00000016684) #12	NRN1 (ENSPTIG00000015277) #13	F13A1 (ENSPTIG00000014413) #14	LY86 (ENSPTIG00000014095) #15	SSR1 (ENSPTIG00000006156) #17	CAGE1 (ENSPTIG00000019168) #18	RIOK1 (ENSPTIG00000018545) #20	ENSPTIG00000018301	DSP (ENSPTIG00000014227) #22	SNRNP48 (ENSPTIG00000013502) #23	BMP6 (ENSPTIG00000009664) #24	TXNDC5 (ENSPTIG00000008525) #25	BLOC1S5 (ENSPTIG00000006195) #27	EEF1E1 (ENSPTIG00000003209) #28	ENSPTIG00000001180	SLC35B3 (ENSPTIG00000019956) #29	ENSPTIG00000018659	ENSPTIG00000017987 #32	TFAP2A (ENSPTIG00000016483) #33	ENSPTIG00000016215	GCNT2 (ENSPTIG00000016061) #35	C6orf52 (ENSPTIG00000015425) #36	PAK1IP1 (ENSPTIG00000014765)	TMEM14C (ENSPTIG00000014497)
Panthera_a	ANCESTRAL SPECIES	32	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564.e #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000165524	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.g.b.b	ENSGT00940000156581
leopard	MODERN SPECIES	79	ECI2 (ENSPPRG00000003341)	ENSPPRG00000003975	CDYL (ENSPPRG00000004629) #7	RPP40 (ENSPPRG00000005612) #8	PPP1R3G (ENSPPRG00000015138)	LYRM4 (ENSPPRG00000005664)	FARS2 (ENSPPRG00000006027) #12	ENSPPRG00000006505	NRN1 (ENSPPRG00000007267) #13	F13A1 (ENSPPRG00000007966) #14	LY86 (ENSPPRG00000008801) #15	RREB1 (ENSPPRG00000012144) #16	SSR1 (ENSPPRG00000013065) #17	CAGE1 (ENSPPRG00000001510) #18	RIOK1 (ENSPPRG00000001932) #20	DSP (ENSPPRG00000003684) #22	SNRNP48 (ENSPPRG00000004283) #23	BMP6 (ENSPPRG00000004373) #24	TXNDC5 (ENSPPRG00000004740) #25	BLOC1S5 (ENSPPRG00000005122) #27	ENSPPRG00000005821 #28	ENSPPRG00000006743	SLC35B3 (ENSPPRG00000006882) #29
lion	MODERN SPECIES	28	ENSPLOG00000018809	ECI2 (ENSPLOG00000018858)	CDYL (ENSPLOG00000018938) #7	RPP40 (ENSPLOG00000019021) #8	ENSPLOG00000019120	LYRM4 (ENSPLOG00000019169)	FARS2 (ENSPLOG00000019222) #12	NRN1 (ENSPLOG00000019270) #13	F13A1 (ENSPLOG00000019314) #14	ENSPLOG00000019351	LY86 (ENSPLOG00000019367) #15	RREB1 (ENSPLOG00000019420) #16	SSR1 (ENSPLOG00000012706) #17	CAGE1 (ENSPLOG00000012826) #18	RIOK1 (ENSPLOG00000013095) #20	DSP (ENSPLOG00000013167) #22	SNRNP48 (ENSPLOG00000013502) #23	BMP6 (ENSPLOG00000013558) #24	TXNDC5 (ENSPLOG00000013690) #25	BLOC1S5 (ENSPLOG00000013761) #27	EEF1E1 (ENSPLOG00000013833) #28	SLC35B3 (ENSPLOG00000013879) #29	ENSPLOG00000013926	ENSPLOG00000014020	TFAP2A (ENSPLOG00000014182) #33	ENSPLOG00000014364 #35	ENSPLOG00000014487	PAK1IP1 (ENSPLOG00000014566)	TMEM14C (ENSPLOG00000014694)	MAK (ENSPLOG00000014775)	GCM2 (ENSPLOG00000014873)
Cat	MODERN SPECIES	236	FAM217A (ENSFCAG00000012169)	ENSFCAG00000045175	ECI2 (ENSFCAG00000012171)	CDYL (ENSFCAG00000028494) #7	RPP40 (ENSFCAG00000009249) #8	PPP1R3G (ENSFCAG00000041787)	LYRM4 (ENSFCAG00000038299)	ENSFCAG00000051390	FARS2 (ENSFCAG00000014441) #12	NRN1 (ENSFCAG00000030503) #13	F13A1 (ENSFCAG00000015505) #14	LY86 (ENSFCAG00000040059) #15	RREB1 (ENSFCAG00000030069) #16	SSR1 (ENSFCAG00000004763) #17	CAGE1 (ENSFCAG00000004764) #18	DSP (ENSFCAG00000010022) #22	SNRNP48 (ENSFCAG00000018853) #23	RIOK1 (ENSFCAG00000027290) #20	BMP6 (ENSFCAG00000025998) #24	TXNDC5 (ENSFCAG00000033619) #25	EEF1E1 (ENSFCAG00000042307) #28	SLC35B3 (ENSFCAG00000046613) #29	ENSFCAG00000025585	TFAP2A (ENSFCAG00000012318) #33	GCNT2 (ENSFCAG00000023409) #35	CB2H6orf52 (ENSFCAG00000028760) #36	PAK1IP1 (ENSFCAG00000001606)	ENSFCAG00000014178	MAK (ENSFCAG00000025189)	GCM2 (ENSFCAG00000001608)	SYCP2L (ENSFCAG00000046624)
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Equus	ANCESTRAL SPECIES	47	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT01000000214902	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT01090000263320	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Donkey	MODERN SPECIES	27	ECI2 (ENSEASG00005012124)	ENSEASG00005032457	CDYL (ENSEASG00005012117) #7	RPP40 (ENSEASG00005012116) #8	PPP1R3G (ENSEASG00005030057)	ENSEASG00005012113	FARS2 (ENSEASG00005012111) #12	NRN1 (ENSEASG00005031623) #13	F13A1 (ENSEASG00005012064) #14	LY86 (ENSEASG00005035064) #15	ENSEASG00005030569	RREB1 (ENSEASG00005012054) #16	SSR1 (ENSEASG00005012046) #17	CAGE1 (ENSEASG00005012039) #18	RIOK1 (ENSEASG00005012032) #20	DSP (ENSEASG00005012026) #22	SNRNP48 (ENSEASG00005012021) #23	BMP6 (ENSEASG00005012013) #24	TXNDC5 (ENSEASG00005011929) #25	BLOC1S5 (ENSEASG00005011920) #27	SLC35B3 (ENSEASG00005011916) #29	ENSEASG00005011909	TFAP2A (ENSEASG00005035077) #33	GCNT2 (ENSEASG00005011901) #35	ENSEASG00005034296	ENSEASG00005035461	MAK (ENSEASG00005011893)	GCM2 (ENSEASG00005029557)	SYCP2L (ENSEASG00005024697)	ELOVL2 (ENSEASG00005011888)	SMIM13 (ENSEASG00005011886)
Horse	MODERN SPECIES	12	ECI2 (ENSECAG00000000313)	ENSECAG00000046549	CDYL (ENSECAG00000014044) #7	RPP40 (ENSECAG00000017247) #8	ENSECAG00000050087	FARS2 (ENSECAG00000000279) #12	NRN1 (ENSECAG00000007120) #13	F13A1 (ENSECAG00000008295) #14	LY86 (ENSECAG00000016805) #15	ENSECAG00000054234	RREB1 (ENSECAG00000018169) #16	SSR1 (ENSECAG00000019520) #17	CAGE1 (ENSECAG00000000270) #18	RIOK1 (ENSECAG00000009007) #20	ENSECAG00000056154	DSP (ENSECAG00000014820) #22	SNRNP48 (ENSECAG00000026937) #23	BMP6 (ENSECAG00000020015) #24	TXNDC5 (ENSECAG00000000106) #25	BLOC1S5 (ENSECAG00000010563) #27	EEF1E1 (ENSECAG00000011095) #28	SLC35B3 (ENSECAG00000011526) #29	ENSECAG00000039765	TFAP2A (ENSECAG00000017468) #33	ENSECAG00000000105 #35	C20H6orf52 (ENSECAG00000052189)	PAK1IP1 (ENSECAG00000008288)	ENSECAG00000026994	MAK (ENSECAG00000011436)	GCM2 (ENSECAG00000017632)	SYCP2L (ENSECAG00000018652)
Chiroptera	ANCESTRAL SPECIES	50	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Megabat	MODERN SPECIES	3603																DSP (ENSPVAG00000002852) #22	SNRNP48 (ENSPVAG00000002854) #23
Microchiroptera	ANCESTRAL SPECIES	1	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Microbat	MODERN SPECIES	1578											ENSMLUG00000005190 #17	CAGE1 (ENSMLUG00000015300) #18	RIOK1 (ENSMLUG00000015312) #20	ENSMLUG00000028083	ENSMLUG00000029100	DSP (ENSMLUG00000008939) #22
Greater horseshoe bat	MODERN SPECIES	27	ENSRFEG00010001108	ECI2 (ENSRFEG00010001054)	CDYL (ENSRFEG00010001012) #7	RPP40 (ENSRFEG00010000963) #8	PPP1R3G (ENSRFEG00010000932)	ENSRFEG00010000919	LYRM4 (ENSRFEG00010000898)	FARS2 (ENSRFEG00010000859) #12	NRN1 (ENSRFEG00010000833) #13	F13A1 (ENSRFEG00010000803) #14	LY86 (ENSRFEG00010000784) #15	RREB1 (ENSRFEG00010000750) #16	SSR1 (ENSRFEG00010000687) #17	CAGE1 (ENSRFEG00010000581) #18	RIOK1 (ENSRFEG00010000475) #20	DSP (ENSRFEG00010000424) #22	SNRNP48 (ENSRFEG00010000383) #23	BMP6 (ENSRFEG00010000319) #24	TXNDC5 (ENSRFEG00010000280) #25	ENSRFEG00010017538 #27	ENSRFEG00010017482 #28	SLC35B3 (ENSRFEG00010017334) #29	ENSRFEG00010017099	ENSRFEG00010017074	TFAP2A (ENSRFEG00010016894) #33	ENSRFEG00010016680 #35	ENSRFEG00010016564	PAK1IP1 (ENSRFEG00010016415)	ENSRFEG00010016356	MAK (ENSRFEG00010015657)	GCM2 (ENSRFEG00010015551)
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Suina	ANCESTRAL SPECIES	8	ENSGT00940000155562	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.i.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Pig	MODERN SPECIES	15	ENSSSCG00000001001	ECI2 (ENSSSCG00000001000)	CDYL (ENSSSCG00000000999) #7	RPP40 (ENSSSCG00000000998) #8	PPP1R3G (ENSSSCG00000000997)	LYRM4 (ENSSSCG00000031269)	FARS2 (ENSSSCG00000038717) #12	NRN1 (ENSSSCG00000026211) #13	F13A1 (ENSSSCG00000024310) #14	LY86 (ENSSSCG00000032355) #15	ENSSSCG00000052423 #16	ENSSSCG00000001021 #16	SSR1 (ENSSSCG00000001022) #17	CAGE1 (ENSSSCG00000038886) #18	RIOK1 (ENSSSCG00000001024) #20	DSP (ENSSSCG00000001025) #22	SNRNP48 (ENSSSCG00000046358) #23	BMP6 (ENSSSCG00000001027) #24	TXNDC5 (ENSSSCG00000034131) #25	BLOC1S5 (ENSSSCG00000040593) #27	EEF1E1 (ENSSSCG00000036257) #28	SLC35B3 (ENSSSCG00000001033) #29	ENSSSCG00000060143	ENSSSCG00000057482	TFAP2A (ENSSSCG00000001036) #33	GCNT2 (ENSSSCG00000062258) #35	ENSSSCG00000033009 #35	C6orf52 (ENSSSCG00000001040) #36	PAK1IP1 (ENSSSCG00000001041)	ENSSSCG00000001038	MAK (ENSSSCG00000001042)
Chacoan peccary	MODERN SPECIES	782	FAM50B (ENSCWAG00000010231)	PRPF4B (ENSCWAG00000010182)	ENSCWAG00000010087	ECI2 (ENSCWAG00000010052)	CDYL (ENSCWAG00000010005) #7	RPP40 (ENSCWAG00000009919) #8	PPP1R3G (ENSCWAG00000009874)	ENSCWAG00000009842	FARS2 (ENSCWAG00000009775) #12	NRN1 (ENSCWAG00000009740) #13	F13A1 (ENSCWAG00000009538) #14	LY86 (ENSCWAG00000009458) #15	RREB1 (ENSCWAG00000009360) #16	SSR1 (ENSCWAG00000009285) #17	RIOK1 (ENSCWAG00000008806) #20	DSP (ENSCWAG00000008400) #22	SNRNP48 (ENSCWAG00000008339) #23	BMP6 (ENSCWAG00000008257) #24	TXNDC5 (ENSCWAG00000008103) #25	BLOC1S5 (ENSCWAG00000008014) #27	EEF1E1 (ENSCWAG00000018400) #28	SLC35B3 (ENSCWAG00000018336) #29	TFAP2A (ENSCWAG00000018252) #33	GCNT2 (ENSCWAG00000018192) #35	ENSCWAG00000018134	PAK1IP1 (ENSCWAG00000018106)	ENSCWAG00000018064	MAK (ENSCWAG00000017925)	GCM2 (ENSCWAG00000017874)	SYCP2L (ENSCWAG00000017696)	ELOVL2 (ENSCWAG00000017630)
Artiodactyla_a	ANCESTRAL SPECIES	27	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Cetacea	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106.u #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.k	ENSGT00940000156581	ENSGT00390000006777.b
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106.u #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.k	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106.u.a #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.k	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00940000155105	ENSGT00940000155106.u.a #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.k	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106.u.a #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772.k	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Beluga whale	MODERN SPECIES	10	PRPF4B (ENSDLEG00000001431)	ECI2 (ENSDLEG00000001462)	ENSDLEG00000001490 #7	RPP40 (ENSDLEG00000001512) #8	PPP1R3G (ENSDLEG00000001526)	LYRM4 (ENSDLEG00000001535)	ENSDLEG00000001554 #34	FARS2 (ENSDLEG00000001576) #12	NRN1 (ENSDLEG00000001599) #13	F13A1 (ENSDLEG00000001613) #14	LY86 (ENSDLEG00000001638) #15	RREB1 (ENSDLEG00000001663) #16	SSR1 (ENSDLEG00000001735) #17	ENSDLEG00000001759 #18	RIOK1 (ENSDLEG00000001779) #20	DSP (ENSDLEG00000001813) #22	SNRNP48 (ENSDLEG00000001859) #23	BMP6 (ENSDLEG00000001873) #24	TXNDC5 (ENSDLEG00000001892) #25	EEF1E1 (ENSDLEG00000001908) #28	SLC35B3 (ENSDLEG00000001916) #29	TFAP2A (ENSDLEG00000001933) #33	ENSDLEG00000001962 #35	GCNT2 (ENSDLEG00000001972) #35	C6orf52 (ENSDLEG00000001994) #36	PAK1IP1 (ENSDLEG00000002009)	ENSDLEG00000002023	MAK (ENSDLEG00000002041)	GCM2 (ENSDLEG00000002122)	SYCP2L (ENSDLEG00000002135)	ELOVL2 (ENSDLEG00000002159)
Narwhal	MODERN SPECIES	310	PRPF4B (ENSMMNG00015010640)	ECI2 (ENSMMNG00015010653)	ENSMMNG00015010684 #7	RPP40 (ENSMMNG00015010735) #8	PPP1R3G (ENSMMNG00015010783)	ENSMMNG00015010792	FARS2 (ENSMMNG00015010823) #12	ENSMMNG00015010864	NRN1 (ENSMMNG00015010879) #13	F13A1 (ENSMMNG00015010895) #14	LY86 (ENSMMNG00015010924) #15	RREB1 (ENSMMNG00015010935) #16	SSR1 (ENSMMNG00015010986) #17	ENSMMNG00015011087 #18	RIOK1 (ENSMMNG00015011118) #20	DSP (ENSMMNG00015011172) #22	SNRNP48 (ENSMMNG00015011245) #23	BMP6 (ENSMMNG00015011262) #24	TXNDC5 (ENSMMNG00015011286) #25	BLOC1S5 (ENSMMNG00015011316) #27	EEF1E1 (ENSMMNG00015011338) #28	SLC35B3 (ENSMMNG00015011358) #29	TFAP2A (ENSMMNG00015011389) #33	ENSMMNG00015011422 #35	GCNT2 (ENSMMNG00015011439) #35	ENSMMNG00015011471	PAK1IP1 (ENSMMNG00015011482)	ENSMMNG00015011503	MAK (ENSMMNG00015011596)	GCM2 (ENSMMNG00015011698)	SYCP2L (ENSMMNG00015011732)
Vaquita	MODERN SPECIES	2	PRPF4B (ENSPSNG00000015086)	FAM217A (ENSPSNG00000014949)	ECI2 (ENSPSNG00000014875)	ENSPSNG00000014779 #7	RPP40 (ENSPSNG00000014549) #8	PPP1R3G (ENSPSNG00000014484)	LYRM4 (ENSPSNG00000014436)	FARS2 (ENSPSNG00000014384) #12	NRN1 (ENSPSNG00000014328) #13	F13A1 (ENSPSNG00000014208) #14	LY86 (ENSPSNG00000014090) #15	RREB1 (ENSPSNG00000014036) #16	SSR1 (ENSPSNG00000013814) #17	CAGE1 (ENSPSNG00000013651) #18	RIOK1 (ENSPSNG00000013540) #20	DSP (ENSPSNG00000012957) #22	SNRNP48 (ENSPSNG00000012856) #23	BMP6 (ENSPSNG00000012797) #24	TXNDC5 (ENSPSNG00000012625) #25	EEF1E1 (ENSPSNG00000012541) #28	SLC35B3 (ENSPSNG00000012393) #29	TFAP2A (ENSPSNG00000012200) #33	GCNT2 (ENSPSNG00000012060) #35	ENSPSNG00000011920 #35	ENSPSNG00000011852	PAK1IP1 (ENSPSNG00000011801)	ENSPSNG00000011743	MAK (ENSPSNG00000011217)	GCM2 (ENSPSNG00000011051)	SYCP2L (ENSPSNG00000010500)	ENSPSNG00000010421
Dolphin	MODERN SPECIES	3052																DSP (ENSTTRG00000016714) #22	SNRNP48 (ENSTTRG00000016715) #23
Sperm whale	MODERN SPECIES	9	ENSPCTG00005006475	PAK1IP1 (ENSPCTG00005006496)	ENSPCTG00005006555	GCNT2 (ENSPCTG00005006617) #35	TFAP2A (ENSPCTG00005006706) #33	ENSPCTG00005006796	SLC35B3 (ENSPCTG00005006822) #29	EEF1E1 (ENSPCTG00005006879) #28	BLOC1S5 (ENSPCTG00005006921) #27	TXNDC5 (ENSPCTG00005006961) #25	BMP6 (ENSPCTG00005007019) #24	ENSPCTG00005007084 #16	SSR1 (ENSPCTG00005007107) #17	CAGE1 (ENSPCTG00005007212) #18	RIOK1 (ENSPCTG00005007645) #20	DSP (ENSPCTG00005007793) #22	LY86 (ENSPCTG00005008221) #15	F13A1 (ENSPCTG00005008252) #14	NRN1 (ENSPCTG00005008319) #13	ENSPCTG00005008355	FARS2 (ENSPCTG00005008380) #12	LYRM4 (ENSPCTG00005008407)	PPP1R3G (ENSPCTG00005008426)	RPP40 (ENSPCTG00005008452) #8	ENSPCTG00005008550 #7	ECI2 (ENSPCTG00005008598)	ENSPCTG00005008657	FAM217A (ENSPCTG00005008731)	PRPF4B (ENSPCTG00005008801)	PXDC1 (ENSPCTG00005008936)	TUBB2A (ENSPCTG00005008977)
Blue whale	MODERN SPECIES	2	FAM217A (ENSBMSG00010007442)	ENSBMSG00010007453	ENSBMSG00010007461	ECI2 (ENSBMSG00010007466)	CDYL (ENSBMSG00010007473) #7	RPP40 (ENSBMSG00010007489) #8	PPP1R3G (ENSBMSG00010007505)	LYRM4 (ENSBMSG00010007512)	FARS2 (ENSBMSG00010007535) #12	NRN1 (ENSBMSG00010007552) #13	F13A1 (ENSBMSG00010007558) #14	ENSBMSG00010007572	SSR1 (ENSBMSG00010007599) #17	CAGE1 (ENSBMSG00010007628) #18	RIOK1 (ENSBMSG00010007661) #20	DSP (ENSBMSG00010007685) #22	SNRNP48 (ENSBMSG00010007716) #23	BMP6 (ENSBMSG00010007723) #24	TXNDC5 (ENSBMSG00010007731) #25	BLOC1S5 (ENSBMSG00010007748) #27	EEF1E1 (ENSBMSG00010007761) #28	SLC35B3 (ENSBMSG00010007775) #29	ENSBMSG00010007795	TFAP2A (ENSBMSG00010007845) #33	ENSBMSG00010007910 #35	GCNT2 (ENSBMSG00010007918) #35	ENSBMSG00010007932	PAK1IP1 (ENSBMSG00010007938)	ENSBMSG00010007944	MAK (ENSBMSG00010007962)	GCM2 (ENSBMSG00010008047)
Pecora	ANCESTRAL SPECIES	32	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Percora_a	ANCESTRAL SPECIES	12	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Bovidae	ANCESTRAL SPECIES	13	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Caprinae	ANCESTRAL SPECIES	41	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00390000003156.a.b.v	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Goat	MODERN SPECIES	15	FOXF2 (ENSCHIG00000020355)	FOXC1 (ENSCHIG00000007582)	GMDS (ENSCHIG00000017697)	MYLK4 (ENSCHIG00000008115)	WRNIP1 (ENSCHIG00000014698)	SERPINB1 (ENSCHIG00000018405)	SERPINB9 (ENSCHIG00000016184)	ENSCHIG00000026893	ENSCHIG00000014629	LY86 (ENSCHIG00000000721) #15	RREB1 (ENSCHIG00000008467) #16	ENSCHIG00000012601	SSR1 (ENSCHIG00000021769) #17	CAGE1 (ENSCHIG00000021103) #18	RIOK1 (ENSCHIG00000001534) #20	DSP (ENSCHIG00000013613) #22	SNRNP48 (ENSCHIG00000015216) #23	BMP6 (ENSCHIG00000026550) #24	TXNDC5 (ENSCHIG00000024737) #25	ENSCHIG00000016809 #27	EEF1E1 (ENSCHIG00000025443) #28	SLC35B3 (ENSCHIG00000018139) #29	TFAP2A (ENSCHIG00000018307) #33	GCNT2 (ENSCHIG00000026124) #35	ENSCHIG00000016207 #35	ENSCHIG00000008720 #35	PAK1IP1 (ENSCHIG00000019850)	TMEM14C (ENSCHIG00000023582)	MAK (ENSCHIG00000021408)	GCM2 (ENSCHIG00000015883)	SYCP2L (ENSCHIG00000018356)
Rambouillet Sheep	MODERN SPECIES	12	PRPF4B (ENSOARG00020025239)	ENSOARG00020025197	CDYL (ENSOARG00020025174) #7	RPP40 (ENSOARG00020025115) #8	PPP1R3G (ENSOARG00020025083)	LYRM4 (ENSOARG00020025075)	FARS2 (ENSOARG00020025055) #12	NRN1 (ENSOARG00020025044) #13	F13A1 (ENSOARG00020025035) #14	LY86 (ENSOARG00020025014) #15	RREB1 (ENSOARG00020025006) #16	ENSOARG00020024996	SSR1 (ENSOARG00020024975) #17	ENSOARG00020024950 #18	RIOK1 (ENSOARG00020024942) #20	DSP (ENSOARG00020024879) #22	SNRNP48 (ENSOARG00020024848) #23	BMP6 (ENSOARG00020024825) #24	TXNDC5 (ENSOARG00020024742) #25	BLOC1S5 (ENSOARG00020024692) #27	EEF1E1 (ENSOARG00020024657) #28	SLC35B3 (ENSOARG00020024600) #29	ENSOARG00020024515	TFAP2A (ENSOARG00020024399) #33	GCNT2 (ENSOARG00020024347) #35	C6orf52 (ENSOARG00020024322) #36	PAK1IP1 (ENSOARG00020024301)	TMEM14C (ENSOARG00020024275)	MAK (ENSOARG00020023865)	GCM2 (ENSOARG00020023811)	SYCP2L (ENSOARG00020023644)
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a.kb #17	ENSGT00400000022103.a.jb.b #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Bos	ANCESTRAL SPECIES	37	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b	ENSGT00940000163747	ENSGT00940000154502.o.b	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00950000185466	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a.kb #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b	ENSGT00940000163747	ENSGT00940000154502.o.b	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00950000185466	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a.kb #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00390000015663.t	ENSGT01050000245864	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581
Cow	MODERN SPECIES	15	ECI2 (ENSBTAG00000015178)	CDYL (ENSBTAG00000016397) #7	RPP40 (ENSBTAG00000003332) #8	ENSBTAG00000051366	PPP1R3G (ENSBTAG00000054777)	ENSBTAG00000018309	LYRM4 (ENSBTAG00000031432)	FARS2 (ENSBTAG00000018072) #12	ENSBTAG00000049778	NRN1 (ENSBTAG00000009873) #13	F13A1 (ENSBTAG00000007268) #14	LY86 (ENSBTAG00000031444) #15	RREB1 (ENSBTAG00000005980) #16	SSR1 (ENSBTAG00000022731) #17	RIOK1 (ENSBTAG00000013821) #20	DSP (ENSBTAG00000015106) #22	SNRNP48 (ENSBTAG00000001123) #23	ENSBTAG00000050109	ENSBTAG00000054759	BMP6 (ENSBTAG00000019234) #24	TXNDC5 (ENSBTAG00000019237) #25	BLOC1S5 (ENSBTAG00000039732) #27	EEF1E1 (ENSBTAG00000002534) #28	SLC35B3 (ENSBTAG00000009157) #29	ENSBTAG00000005248 #32	TFAP2A (ENSBTAG00000001250) #33	GCNT2 (ENSBTAG00000039326) #35	C6orf52 (ENSBTAG00000049554) #36	PAK1IP1 (ENSBTAG00000018674)	TMEM14C (ENSBTAG00000005808)	MAK (ENSBTAG00000014053)
Hybrid Bos Indicus	MODERN SPECIES	15	RPP40 (ENSBIXG00005026040) #8	ENSBIXG00005026061	PPP1R3G (ENSBIXG00005026071)	ENSBIXG00005006186	LYRM4 (ENSBIXG00005026120)	ENSBIXG00005026126	FARS2 (ENSBIXG00005004470) #12	NRN1 (ENSBIXG00005026237) #13	F13A1 (ENSBIXG00005026279) #14	ENSBIXG00005004500 #15	ENSBIXG00005026402	RREB1 (ENSBIXG00005026423) #16	ENSBIXG00005026495 #17	CAGE1 (ENSBIXG00005026546) #18	RIOK1 (ENSBIXG00005004541) #20	DSP (ENSBIXG00005026847) #22	ENSBIXG00005026887	SNRNP48 (ENSBIXG00005026900) #23	ENSBIXG00005026917	BMP6 (ENSBIXG00005026960) #24	ENSBIXG00005027169 #25	SLC35B3 (ENSBIXG00005027304) #29	ENSBIXG00005027359	TFAP2A (ENSBIXG00005004723) #33	GCNT2 (ENSBIXG00005027509) #35	ENSBIXG00005004737	PAK1IP1 (ENSBIXG00005027581)	TMEM14C (ENSBIXG00005027596)	MAK (ENSBIXG00005027680)	GCM2 (ENSBIXG00005027710)	SYCP2L (ENSBIXG00005027785)
Bos_a	ANCESTRAL SPECIES	49	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b	ENSGT00940000163747	ENSGT00940000154502.o.b	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00950000185466	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a.kb #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974.g.a #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Domestic yak	MODERN SPECIES	16	RPP40 (ENSBGRG00000007644) #8	ENSBGRG00000007618	PPP1R3G (ENSBGRG00000007602)	SDCBP (ENSBGRG00000007518)	ENSBGRG00000007447	ENSBGRG00000007376	FARS2 (ENSBGRG00000007007) #12	ENSBGRG00000019202	NRN1 (ENSBGRG00000019159) #13	F13A1 (ENSBGRG00000018916) #14	ENSBGRG00000018760 #15	ENSBGRG00000018653 #16	SSR1 (ENSBGRG00000018403) #17	CAGE1 (ENSBGRG00000018351) #18	RIOK1 (ENSBGRG00000017936) #20	DSP (ENSBGRG00000016985) #22	SNRNP48 (ENSBGRG00000016827) #23	BMP6 (ENSBGRG00000016718) #24	ENSBGRG00000016429 #25	BLOC1S5 (ENSBGRG00000016313) #27	EEF1E1 (ENSBGRG00000016140) #28	SLC35B3 (ENSBGRG00000015938) #29	ENSBGRG00000015535	TFAP2A (ENSBGRG00000015201) #33	GCNT2 (ENSBGRG00000015016) #35	ENSBGRG00000014939	PAK1IP1 (ENSBGRG00000014807)	TMEM14C (ENSBGRG00000014698)	ENSBGRG00000014677	MAK (ENSBGRG00000014298)	GCM2 (ENSBGRG00000014183)
Wild yak	MODERN SPECIES	573												RREB1 (ENSBMUG00000019854) #16	ENSBMUG00000019801 #17	ENSBMUG00000019766 #18	RIOK1 (ENSBMUG00000019749) #20	DSP (ENSBMUG00000019709) #22	SNRNP48 (ENSBMUG00000019630) #23
American bison	MODERN SPECIES	2989				CDYL (ENSBBBG00000013847) #7	RPP40 (ENSBBBG00000002949) #8	ENSBBBG00000013742	ENSBBBG00000002927	FARS2 (ENSBBBG00000013724) #12	NRN1 (ENSBBBG00000013713) #13	F13A1 (ENSBBBG00000002894) #14	LY86 (ENSBBBG00000002884) #15	ENSBBBG00000013681 #16	ENSBBBG00000002854 #17	ENSBBBG00000013610 #18	RIOK1 (ENSBBBG00000013597) #20	DSP (ENSBBBG00000009097) #22	SNRNP48 (ENSBBBG00000013532) #23	ENSBBBG00000013517	ENSBBBG00000013510	ENSBBBG00000013503 #24	TXNDC5 (ENSBBBG00000013490) #25	ENSBBBG00000013448 #27	EEF1E1 (ENSBBBG00000013432) #28	SLC35B3 (ENSBBBG00000013418) #29	ENSBBBG00000002741	ENSBBBG00000002721	ENSBBBG00000013346 #35	GCNT2 (ENSBBBG00000013329) #35	ENSBBBG00000013305	PAK1IP1 (ENSBBBG00000013303)	TMEM14C (ENSBBBG00000002696)
Siberian musk deer	MODERN SPECIES	96	ECI2 (ENSMMSG00000020168)	CDYL (ENSMMSG00000020126) #7	RPP40 (ENSMMSG00000020056) #8	PPP1R3G (ENSMMSG00000020040)	ENSMMSG00000020020	ENSMMSG00000020008	ENSMMSG00000019992	FARS2 (ENSMMSG00000019967) #12	NRN1 (ENSMMSG00000019951) #13	F13A1 (ENSMMSG00000019911) #14	LY86 (ENSMMSG00000019891) #15	RREB1 (ENSMMSG00000019847) #16	SSR1 (ENSMMSG00000019747) #17	ENSMMSG00000019694 #18	RIOK1 (ENSMMSG00000019623) #20	DSP (ENSMMSG00000019461) #22	SNRNP48 (ENSMMSG00000019424) #23	BMP6 (ENSMMSG00000019394) #24	TXNDC5 (ENSMMSG00000019323) #25	BLOC1S5 (ENSMMSG00000019279) #27	EEF1E1 (ENSMMSG00000019234) #28	SLC35B3 (ENSMMSG00000019153) #29	ENSMMSG00000019106 #32	TFAP2A (ENSMMSG00000019012) #33	GCNT2 (ENSMMSG00000018938) #35	ENSMMSG00000018892	PAK1IP1 (ENSMMSG00000018861)	ENSMMSG00000018807	MAK (ENSMMSG00000018306)	GCM2 (ENSMMSG00000018249)	ELOVL2 (ENSMMSG00000017894)
Yarkand deer	MODERN SPECIES	30	FAM217A (ENSCHYG00000001494)	ENSCHYG00000001482	ECI2 (ENSCHYG00000001423)	CDYL (ENSCHYG00000001347) #7	RPP40 (ENSCHYG00000001289) #8	PPP1R3G (ENSCHYG00000001273)	ENSCHYG00000001244	FARS2 (ENSCHYG00000001148) #12	NRN1 (ENSCHYG00000001106) #13	F13A1 (ENSCHYG00000001064) #14	LY86 (ENSCHYG00000001035) #15	RREB1 (ENSCHYG00000000989) #16	SSR1 (ENSCHYG00000000835) #17	ENSCHYG00000000763 #18	RIOK1 (ENSCHYG00000000714) #20	DSP (ENSCHYG00000000616) #22	SNRNP48 (ENSCHYG00000000577) #23	ENSCHYG00000000567	ENSCHYG00000000559	BMP6 (ENSCHYG00000000551) #24	TXNDC5 (ENSCHYG00000000515) #25	ENSCHYG00000000494 #27	EEF1E1 (ENSCHYG00000000476) #28	SLC35B3 (ENSCHYG00000000422) #29	ENSCHYG00000000381 #32	TFAP2A (ENSCHYG00000000326) #33	ENSCHYG00000000298 #35	GCNT2 (ENSCHYG00000000267) #35	PAK1IP1 (ENSCHYG00000000228)	TMEM14C (ENSCHYG00000024918)	MAK (ENSCHYG00000024598)
Camelidae	ANCESTRAL SPECIES	54	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00990000204394	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b
Arabian camel	MODERN SPECIES	12	FAM217A (ENSCDRG00005015744)	ENSCDRG00005015800	ECI2 (ENSCDRG00005015840)	ENSCDRG00005015881	CDYL (ENSCDRG00005015913) #7	RPP40 (ENSCDRG00005015971) #8	LYRM4 (ENSCDRG00005016295)	FARS2 (ENSCDRG00005008824) #12	ENSCDRG00005008875 #13	F13A1 (ENSCDRG00005009013) #14	LY86 (ENSCDRG00005009098) #15	RREB1 (ENSCDRG00005009166) #16	SSR1 (ENSCDRG00005009317) #17	CAGE1 (ENSCDRG00005009627) #18	RIOK1 (ENSCDRG00005010469) #20	DSP (ENSCDRG00005010959) #22	SNRNP48 (ENSCDRG00005011352) #23	BMP6 (ENSCDRG00005011415) #24	TXNDC5 (ENSCDRG00005011574) #25	BLOC1S5 (ENSCDRG00005011629) #27	EEF1E1 (ENSCDRG00005011711) #28	SLC35B3 (ENSCDRG00005011765) #29	ENSCDRG00005011893 #32	TFAP2A (ENSCDRG00005011950) #33	ENSCDRG00005012206 #35	GCNT2 (ENSCDRG00005012254) #35	ENSCDRG00005012361	PAK1IP1 (ENSCDRG00005012436)	TMEM14C (ENSCDRG00005012475)	MAK (ENSCDRG00005012566)	GCM2 (ENSCDRG00005013490)
Alpaca	MODERN SPECIES	3149																DSP (ENSVPAG00000003552) #22	SNRNP48 (ENSVPAG00000003557) #23
Atlantogenata	ANCESTRAL SPECIES	86	ENSGT00940000168960	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Afrotheria	ANCESTRAL SPECIES	94	ENSGT00940000168960	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Afrotheria_a	ANCESTRAL SPECIES	96	ENSGT00940000168960	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Elephant	MODERN SPECIES	447	FAM217A (ENSLAFG00000022708)	ENSLAFG00000027067	ECI2 (ENSLAFG00000000020)	CDYL (ENSLAFG00000018419) #7	RPP40 (ENSLAFG00000007530) #8	PPP1R3G (ENSLAFG00000031926)	LYRM4 (ENSLAFG00000020549)	FARS2 (ENSLAFG00000007104) #12	NRN1 (ENSLAFG00000012437) #13	F13A1 (ENSLAFG00000010217) #14	LY86 (ENSLAFG00000000519) #15	RREB1 (ENSLAFG00000005300) #16	SSR1 (ENSLAFG00000032677) #17	CAGE1 (ENSLAFG00000005501) #18	RIOK1 (ENSLAFG00000005504) #20	DSP (ENSLAFG00000029022) #22	SNRNP48 (ENSLAFG00000011152) #23	BMP6 (ENSLAFG00000013374) #24	TXNDC5 (ENSLAFG00000028090) #25	BLOC1S5 (ENSLAFG00000023138) #27	EEF1E1 (ENSLAFG00000016842) #28	SLC35B3 (ENSLAFG00000002579) #29	ENSLAFG00000017772	TFAP2A (ENSLAFG00000011386) #33	ENSLAFG00000029289 #35	ENSLAFG00000015891 #35	PAK1IP1 (ENSLAFG00000009789)	TMEM14C (ENSLAFG00000009795)	MAK (ENSLAFG00000009799)	GCM2 (ENSLAFG00000007475)	ENSLAFG00000007477
Tenrec	MODERN SPECIES	221																DSP (ENSETEG00000003276) #22
Xenarthra	ANCESTRAL SPECIES	1722																ENSGT00940000154843.F #22	ENSGT00390000004886 #23
Sloth	MODERN SPECIES	191																ENSCHOG00000008601 #22
Armadillo	MODERN SPECIES	2151																DSP (ENSDNOG00000014941) #22	SNRNP48 (ENSDNOG00000014978) #23
Marsupialia	ANCESTRAL SPECIES	1	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.g #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Marsupialia_b	ANCESTRAL SPECIES	2	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.h #35	ENSGT00940000156849.g.b #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Diprotodontia	ANCESTRAL SPECIES	1	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.h #35	ENSGT00940000156849.g.b #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Diprotodontia_a	ANCESTRAL SPECIES		ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.h #35	ENSGT00940000156849.g.b #35	ENSGT00940000163315 #36	ENSGT00390000001263	ENSGT00940000154772	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
koala	MODERN SPECIES	140												RREB1 (ENSPCIG00000012644) #16	SSR1 (ENSPCIG00000037323) #17	ENSPCIG00000012651 #18	RIOK1 (ENSPCIG00000012653) #20	DSP (ENSPCIG00000012658) #22	SNRNP48 (ENSPCIG00000032890) #23	BMP6 (ENSPCIG00000029393) #24	TXNDC5 (ENSPCIG00000029391) #25	ENSPCIG00000029390 #28	SLC35B3 (ENSPCIG00000029387) #29	TFAP2A (ENSPCIG00000027541) #33	ENSPCIG00000027540 #35	ENSPCIG00000027538 #35	ENSPCIG00000005581 #35	ENSPCIG00000027154 #36	PAK1IP1 (ENSPCIG00000027111)	TMEM14C (ENSPCIG00000035647)	MAK (ENSPCIG00000027107)	GCM2 (ENSPCIG00000027105)	ENSPCIG00000027103
Common wonbat	MODERN SPECIES	34	ENSVURG00010004427	ENSVURG00010004422	ENSVURG00010004414 #7	RPP40 (ENSVURG00010004377) #8	ENSVURG00010004367	LYRM4 (ENSVURG00010004361)	FARS2 (ENSVURG00010004338) #12	NRN1 (ENSVURG00010004289) #13	F13A1 (ENSVURG00010004170) #14	ENSVURG00010004125	LY86 (ENSVURG00010004118) #15	RREB1 (ENSVURG00010004039) #16	ENSVURG00010003957 #17	ENSVURG00010003938 #18	RIOK1 (ENSVURG00010003926) #20	DSP (ENSVURG00010003799) #22	SNRNP48 (ENSVURG00010003775) #23	ENSVURG00010003758	BMP6 (ENSVURG00010003746) #24	TXNDC5 (ENSVURG00010003714) #25	BLOC1S5 (ENSVURG00010003707) #27	EEF1E1 (ENSVURG00010003701) #28	SLC35B3 (ENSVURG00010003637) #29	TFAP2A (ENSVURG00010003569) #33	GCNT2 (ENSVURG00010003537) #35	ENSVURG00010003495 #36	PAK1IP1 (ENSVURG00010003476)	TMEM14C (ENSVURG00010003464)	MAK (ENSVURG00010003434)	GCM2 (ENSVURG00010003423)	ELOVL2 (ENSVURG00010003383)
Wallaby	MODERN SPECIES	772																ENSMEUG00000009876 #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000007175	ENSSHAG00000006576	ECI2 (ENSSHAG00000031929)	ENSSHAG00000008802 #7	RPP40 (ENSSHAG00000002102) #8	ENSSHAG00000007760	PPP1R3G (ENSSHAG00000025505)	FARS2 (ENSSHAG00000026087) #12	NRN1 (ENSSHAG00000020937) #13	F13A1 (ENSSHAG00000014073) #14	LY86 (ENSSHAG00000024958) #15	RREB1 (ENSSHAG00000025992) #16	SSR1 (ENSSHAG00000023914) #17	ENSSHAG00000001059 #18	RIOK1 (ENSSHAG00000003091) #20	DSP (ENSSHAG00000023538) #22	SNRNP48 (ENSSHAG00000014483) #23	BMP6 (ENSSHAG00000027197) #24	TXNDC5 (ENSSHAG00000013005) #25	BLOC1S5 (ENSSHAG00000012325) #27	EEF1E1 (ENSSHAG00000012122) #28	SLC35B3 (ENSSHAG00000009372) #29	ENSSHAG00000021981	TFAP2A (ENSSHAG00000004162) #33	ENSSHAG00000027512 #35	ENSSHAG00000012330 #35	ENSSHAG00000024312 #36	PAK1IP1 (ENSSHAG00000011569)	ENSSHAG00000026067	MAK (ENSSHAG00000011049)	GCM2 (ENSSHAG00000010590)
Opossum	MODERN SPECIES	2	ENSMODG00000027364	ENSMODG00000009804 #7	RPP40 (ENSMODG00000009826) #8	ENSMODG00000049736	ENSMODG00000042735	FARS2 (ENSMODG00000009839) #12	ENSMODG00000042097 #13	F13A1 (ENSMODG00000009877) #14	ENSMODG00000039282	ENSMODG00000009878 #15	RREB1 (ENSMODG00000009892) #16	SSR1 (ENSMODG00000028246) #17	ENSMODG00000009939 #18	RIOK1 (ENSMODG00000009964) #20	ENSMODG00000043475	DSP (ENSMODG00000009982) #22	SNRNP48 (ENSMODG00000009996) #23	ENSMODG00000046703	BMP6 (ENSMODG00000010012) #24	TXNDC5 (ENSMODG00000010022) #25	BLOC1S5 (ENSMODG00000046178) #27	EEF1E1 (ENSMODG00000048450) #28	SLC35B3 (ENSMODG00000010044) #29	ENSMODG00000022856	ENSMODG00000045776	ENSMODG00000039144	ENSMODG00000010252 #32	ENSMODG00000006895	TFAP2A (ENSMODG00000010299) #33	GCNT2 (ENSMODG00000027437) #35	ENSMODG00000028324 #36
Platypus	MODERN SPECIES	85	ENSOANG00000010168	CAVIN4 (ENSOANG00000010169)	ENSOANG00000010170	ENSOANG00000010173	LRRC14B (ENSOANG00000010172)	SERPINB10 (ENSOANG00000047007)	SERPINB2 (ENSOANG00000047223)	ENSOANG00000049647	ENSOANG00000010178	ENSOANG00000030948	EXOC3 (ENSOANG00000010181)	ENSOANG00000019891	ENSOANG00000010182	ENSOANG00000051237	RIOK1 (ENSOANG00000012553) #20	DSP (ENSOANG00000007176) #22	SNRNP48 (ENSOANG00000046257) #23	BMP6 (ENSOANG00000038907) #24	TXNDC5 (ENSOANG00000050190) #25	ENSOANG00000007179 #27	EEF1E1 (ENSOANG00000007180) #28	SLC35B3 (ENSOANG00000007181) #29	ENSOANG00000007182 #32	TFAP2A (ENSOANG00000007183) #33	GCNT2 (ENSOANG00000045258) #35	ENSOANG00000042169 #36	PAK1IP1 (ENSOANG00000042361)	TMEM14C (ENSOANG00000036703)	MAK (ENSOANG00000007190)	GCM2 (ENSOANG00000007191)	ENSOANG00000007192
Sauria	ANCESTRAL SPECIES		ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Archelosauria	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000156849.kc #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b
Cryptodira	ANCESTRAL SPECIES	7	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Testudinoidea	ANCESTRAL SPECIES		ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Emydidae	ANCESTRAL SPECIES		ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920.g #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Three-toed box turtle	MODERN SPECIES	24											F13A1 (ENSTMTG00000013860) #14	LY86 (ENSTMTG00000013879) #15	RREB1 (ENSTMTG00000013890) #16	SSR1 (ENSTMTG00000013913) #17	RIOK1 (ENSTMTG00000013930) #20	DSP (ENSTMTG00000013957) #22	ENSTMTG00000014003	BMP6 (ENSTMTG00000014022) #24	ENSTMTG00000014041 #25	BLOC1S5 (ENSTMTG00000014068) #27	EEF1E1 (ENSTMTG00000014077) #28	SLC35B3 (ENSTMTG00000014088) #29	ENSTMTG00000014107 #32	TFAP2A (ENSTMTG00000014146) #33	ENSTMTG00000014211 #35	MAK (ENSTMTG00000014226)	GCM2 (ENSTMTG00000014257)	SYCP2L (ENSTMTG00000014286)	ELOVL2 (ENSTMTG00000014325)	SMIM13 (ENSTMTG00000014343)	NEDD9 (ENSTMTG00000014353)
painted turtle	MODERN SPECIES	2427	FAM217A (ENSCPBG00000009034)	ECI2 (ENSCPBG00000009023)	ENSCPBG00000009008 #7	RPP40 (ENSCPBG00000009003) #8	PPP1R3G (ENSCPBG00000009001)	ENSCPBG00000008999	ENSCPBG00000008989	FARS2 (ENSCPBG00000008751) #12	NRN1 (ENSCPBG00000008731) #13	F13A1 (ENSCPBG00000008724) #14	LY86 (ENSCPBG00000008717) #15	RREB1 (ENSCPBG00000008709) #16	SSR1 (ENSCPBG00000008698) #17	ENSCPBG00000008691 #18	RIOK1 (ENSCPBG00000008685) #20	DSP (ENSCPBG00000008662) #22	ENSCPBG00000008597	BMP6 (ENSCPBG00000008587) #24	ENSCPBG00000008571 #25	ENSCPBG00000008565 #27	EEF1E1 (ENSCPBG00000008561) #28	SLC35B3 (ENSCPBG00000008554) #29	ENSCPBG00000008545	ENSCPBG00000008540 #32	TFAP2A (ENSCPBG00000008535) #33	ENSCPBG00000008530 #35	ENSCPBG00000008525 #35	ENSCPBG00000008522	MAK (ENSCPBG00000008513)	GCM2 (ENSCPBG00000008503)	SYCP2L (ENSCPBG00000008495)
Chinese turtle	MODERN SPECIES	2232	PRPF4B (ENSPSIG00000008502)	FAM217A (ENSPSIG00000008371)	ECI2 (ENSPSIG00000008142)	ENSPSIG00000007881 #7	RPP40 (ENSPSIG00000007854) #8	ENSPSIG00000000655	FARS2 (ENSPSIG00000007752) #12	NRN1 (ENSPSIG00000007743) #13	F13A1 (ENSPSIG00000007111) #14	LY86 (ENSPSIG00000007069) #15	ENSPSIG00000000639	RREB1 (ENSPSIG00000006582) #16	CAGE1 (ENSPSIG00000006500) #18	RIOK1 (ENSPSIG00000006488) #20	SSR1 (ENSPSIG00000006402) #17	DSP (ENSPSIG00000005677) #22	ENSPSIG00000005661	BMP6 (ENSPSIG00000005478) #24	TXNDC5 (ENSPSIG00000005381) #25	BLOC1S5 (ENSPSIG00000005355) #27	EEF1E1 (ENSPSIG00000005220) #28	SLC35B3 (ENSPSIG00000005209) #29	ENSPSIG00000005167	ENSPSIG00000000622	TFAP2A (ENSPSIG00000005093) #33	ENSPSIG00000000615 #35	ENSPSIG00000005003 #35	MAK (ENSPSIG00000004790)	GCM2 (ENSPSIG00000004698)	ELOVL2 (ENSPSIG00000004643)	NEDD9 (ENSPSIG00000004619)
Archosauria	ANCESTRAL SPECIES		ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000154543.b	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Aves	ANCESTRAL SPECIES	24	ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Neognathae	ANCESTRAL SPECIES		ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Galloanserae	ANCESTRAL SPECIES		ENSGT00940000157354	ENSGT00390000009209.d	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Anatidae	ANCESTRAL SPECIES	1	ENSGT00940000158009	ENSGT00390000012189	ENSGT00390000009802.b	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Pink-footed goose	MODERN SPECIES	98	OTULIN (ENSABRG00000005499)	ECI2 (ENSABRG00000005485)	ENSABRG00000005477 #7	RPP40 (ENSABRG00000005475) #8	ENSABRG00000005462	PPP1R3G (ENSABRG00000005458)	ENSABRG00000005454	FARS2 (ENSABRG00000005420) #12	ENSABRG00000005402 #13	F13A1 (ENSABRG00000005376) #14	ENSABRG00000005368	LY86 (ENSABRG00000005360) #15	RREB1 (ENSABRG00000005337) #16	SSR1 (ENSABRG00000005326) #17	RIOK1 (ENSABRG00000005309) #20	DSP (ENSABRG00000005283) #22	BMP6 (ENSABRG00000005277) #24	TXNDC5 (ENSABRG00000005259) #25	BLOC1S5 (ENSABRG00000005253) #27	EEF1E1 (ENSABRG00000005249) #28	SLC35B3 (ENSABRG00000005232) #29
Duck	MODERN SPECIES	10	OTULIN (ENSAPLG00000006391)	ECI2 (ENSAPLG00000006010)	ENSAPLG00000005925 #7	RPP40 (ENSAPLG00000005691) #8	PPP1R3G (ENSAPLG00000024792)	ENSAPLG00000025581	FARS2 (ENSAPLG00000005643) #12	NRN1 (ENSAPLG00000021023) #13	F13A1 (ENSAPLG00000005008) #14	ENSAPLG00000020381	LY86 (ENSAPLG00000030505) #15	RREB1 (ENSAPLG00000004726) #16	SSR1 (ENSAPLG00000004473) #17	RIOK1 (ENSAPLG00000004196) #20	ENSAPLG00000019206	DSP (ENSAPLG00000003818) #22	BMP6 (ENSAPLG00000003652) #24	TXNDC5 (ENSAPLG00000003126) #25	BLOC1S5 (ENSAPLG00000003057) #27	SLC35B3 (ENSAPLG00000002812) #29	ENSAPLG00000020556	ENSAPLG00000003406 #32	TFAP2A (ENSAPLG00000003330) #33	GCNT2 (ENSAPLG00000027225) #35	ENSAPLG00000022114	MAK (ENSAPLG00000003041)	GCM2 (ENSAPLG00000002817)	ENSAPLG00000018343	ELOVL2 (ENSAPLG00000002641)	SMIM13 (ENSAPLG00000023021)	NEDD9 (ENSAPLG00000001295)
Phasianidae	ANCESTRAL SPECIES	1	ENSGT00940000157354	ENSGT00390000009209.d	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000168622	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b
Phasianidae_b	ANCESTRAL SPECIES	1	ENSGT00940000157354	ENSGT00390000009209.d	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000168622	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b
Chicken	MODERN SPECIES	11	SLC22A23 (ENSGALG00010011348)	PXDC1 (ENSGALG00010011343)	PRPF4B (ENSGALG00010011318)	ECI2 (ENSGALG00010011306)	ENSGALG00010011247 #7	ENSGALG00010011235	PPP1R3G (ENSGALG00010011021)	LYRM4 (ENSGALG00010011015)	FARS2 (ENSGALG00010010977) #12	NRN1 (ENSGALG00010010942) #13	F13A1 (ENSGALG00010010923) #14	LY86 (ENSGALG00010010896) #15	RREB1 (ENSGALG00010010349) #16	SSR1 (ENSGALG00010010270) #17	RIOK1 (ENSGALG00010010201) #20	DSP (ENSGALG00010010188) #22	BMP6 (ENSGALG00010010456) #24	TXNDC5 (ENSGALG00010010444) #25	BLOC1S5 (ENSGALG00010010425) #27	EEF1E1 (ENSGALG00010012712) #28	SLC35B3 (ENSGALG00010010416) #29	ENSGALG00010010403	TFAP2A (ENSGALG00010009668) #33	GCNT2 (ENSGALG00010010871) #35	ENSGALG00010010850	MAK (ENSGALG00010010825)	GCM2 (ENSGALG00010010790)	SYCP2L (ENSGALG00010010747)	ELOVL2 (ENSGALG00010010728)	NEDD9 (ENSGALG00010010697)	SMIM13 (ENSGALG00010010682)
Turkey	MODERN SPECIES	22	ENSMGAG00000022935	SLC22A23 (ENSMGAG00000004155)	PXDC1 (ENSMGAG00000017797)	PRPF4B (ENSMGAG00000004104)	ECI2 (ENSMGAG00000004079)	ENSMGAG00000004026 #7	RPP40 (ENSMGAG00000004009) #8	LYRM4 (ENSMGAG00000004002)	FARS2 (ENSMGAG00000003984) #12	NRN1 (ENSMGAG00000022812) #13	F13A1 (ENSMGAG00000003939) #14	LY86 (ENSMGAG00000003927) #15	RREB1 (ENSMGAG00000003910) #16	SSR1 (ENSMGAG00000003888) #17	RIOK1 (ENSMGAG00000003816) #20	DSP (ENSMGAG00000003779) #22	BMP6 (ENSMGAG00000003761) #24	TXNDC5 (ENSMGAG00000003730) #25	BLOC1S5 (ENSMGAG00000022135) #27	EEF1E1 (ENSMGAG00000003704) #28	SLC35B3 (ENSMGAG00000003670) #29	ENSMGAG00000003665	TFAP2A (ENSMGAG00000016768) #33	GCNT2 (ENSMGAG00000003643) #35	MAK (ENSMGAG00000003556)	GCM2 (ENSMGAG00000003533)	SYCP2L (ENSMGAG00000003501)	ELOVL2 (ENSMGAG00000003445)	SMIM13 (ENSMGAG00000021204)	NEDD9 (ENSMGAG00000003409)	TMEM170B (ENSMGAG00000019401)
Japanese quail	MODERN SPECIES	11	SLC22A23 (ENSCJPG00005016793)	ENSCJPG00005016794	PRPF4B (ENSCJPG00005016829)	ECI2 (ENSCJPG00005016830)	ENSCJPG00005016876 #7	RPP40 (ENSCJPG00005016878) #8	PPP1R3G (ENSCJPG00005016879)	LYRM4 (ENSCJPG00005016880)	FARS2 (ENSCJPG00005016936) #12	NRN1 (ENSCJPG00005016967) #13	F13A1 (ENSCJPG00005016970) #14	LY86 (ENSCJPG00005016981) #15	RREB1 (ENSCJPG00005016991) #16	SSR1 (ENSCJPG00005016996) #17	RIOK1 (ENSCJPG00005017004) #20	DSP (ENSCJPG00005017013) #22	BMP6 (ENSCJPG00005017019) #24	TXNDC5 (ENSCJPG00005017023) #25	BLOC1S5 (ENSCJPG00005017026) #27	EEF1E1 (ENSCJPG00005017027) #28	SLC35B3 (ENSCJPG00005017034) #29	ENSCJPG00005017044	ENSCJPG00005017060 #32	ENSCJPG00005017070	TFAP2A (ENSCJPG00005017071) #33	ENSCJPG00005017075 #35	ENSCJPG00005017076	MAK (ENSCJPG00005017078)	GCM2 (ENSCJPG00005017079)	SYCP2L (ENSCJPG00005017081)	ELOVL2 (ENSCJPG00005017084)
Neognathae_b	ANCESTRAL SPECIES	3	ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Passeriformes	ANCESTRAL SPECIES		ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Passeriformes_d	ANCESTRAL SPECIES		ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b
Passeriformes_g	ANCESTRAL SPECIES	3	ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b
Medium ground finch	MODERN SPECIES	79	ENSGFOG00000013373	SLC22A23 (ENSGFOG00000013374)	PXDC1 (ENSGFOG00000013381)	PRPF4B (ENSGFOG00000013384)	ECI2 (ENSGFOG00000013394)	ENSGFOG00000013398 #7	RPP40 (ENSGFOG00000013400) #8	ENSGFOG00000013401	FARS2 (ENSGFOG00000013403) #12	NRN1 (ENSGFOG00000013406) #13	F13A1 (ENSGFOG00000013409) #14	LY86 (ENSGFOG00000013427) #15	RREB1 (ENSGFOG00000013428) #16	SSR1 (ENSGFOG00000013437) #17	RIOK1 (ENSGFOG00000013445) #20	DSP (ENSGFOG00000013456) #22	BMP6 (ENSGFOG00000013463) #24	TXNDC5 (ENSGFOG00000013475) #25	BLOC1S5 (ENSGFOG00000013476) #27	EEF1E1 (ENSGFOG00000000094) #28	SLC35B3 (ENSGFOG00000000677) #29	ENSGFOG00000000692	ENSGFOG00000000702 #32	TFAP2A (ENSGFOG00000000714) #33	MAK (ENSGFOG00000000732)	GCM2 (ENSGFOG00000000770)	ELOVL2 (ENSGFOG00000000784)	SMIM13 (ENSGFOG00000000792)	NEDD9 (ENSGFOG00000000803)	TMEM170B (ENSGFOG00000000813)	ADTRP (ENSGFOG00000000860)
Passeroidea	ANCESTRAL SPECIES	2	ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b	ENSGT00940000160424
Zebra finch	MODERN SPECIES	12	PXDC1 (ENSTGUG00000002202)	PRPF4B (ENSTGUG00000002208)	ECI2 (ENSTGUG00000002230)	ENSTGUG00000002246 #7	RPP40 (ENSTGUG00000002258) #8	ENSTGUG00000021338	PPP1R3G (ENSTGUG00000020062)	LYRM4 (ENSTGUG00000021255)	FARS2 (ENSTGUG00000002269) #12	NRN1 (ENSTGUG00000002274) #13	F13A1 (ENSTGUG00000002276) #14	LY86 (ENSTGUG00000026091) #15	RREB1 (ENSTGUG00000002309) #16	SSR1 (ENSTGUG00000002319) #17	ENSTGUG00000020885	DSP (ENSTGUG00000002348) #22	ENSTGUG00000023765	BMP6 (ENSTGUG00000026736) #24	TXNDC5 (ENSTGUG00000002358) #25	EEF1E1 (ENSTGUG00000025656) #28	SLC35B3 (ENSTGUG00000002378) #29	ENSTGUG00000020683	ENSTGUG00000005707 #32	TFAP2A (ENSTGUG00000005713) #33	ENSTGUG00000005723	MAK (ENSTGUG00000005730)	GCM2 (ENSTGUG00000005756)	SYCP2L (ENSTGUG00000005763)	ELOVL2 (ENSTGUG00000005767)	SMIM13 (ENSTGUG00000021180)	NEDD9 (ENSTGUG00000005794)
Common canary	MODERN SPECIES		PSMG4 (ENSSCAG00000002041)	SLC22A23 (ENSSCAG00000002027)	PXDC1 (ENSSCAG00000002010)	PRPF4B (ENSSCAG00000001999)	ECI2 (ENSSCAG00000001987)	ENSSCAG00000001965 #7	RPP40 (ENSSCAG00000001959) #8	ENSSCAG00000001955	FARS2 (ENSSCAG00000001940) #12	NRN1 (ENSSCAG00000001893) #13	F13A1 (ENSSCAG00000001885) #14	LY86 (ENSSCAG00000001879) #15	RREB1 (ENSSCAG00000001855) #16	SSR1 (ENSSCAG00000001843) #17	RIOK1 (ENSSCAG00000001794) #20	DSP (ENSSCAG00000001345) #22	BMP6 (ENSSCAG00000001094) #24	TXNDC5 (ENSSCAG00000001043) #25	EEF1E1 (ENSSCAG00000001021) #28	SLC35B3 (ENSSCAG00000001008) #29	ENSSCAG00000000986	ENSSCAG00000000964 #32	TFAP2A (ENSSCAG00000000910) #33	ENSSCAG00000000901	MAK (ENSSCAG00000000878)	GCM2 (ENSSCAG00000000865)	ELOVL2 (ENSSCAG00000000858)	SMIM13 (ENSSCAG00000000852)	NEDD9 (ENSSCAG00000000848)	TMEM170B (ENSSCAG00000000818)	ADTRP (ENSSCAG00000000807)
Flycatcher	MODERN SPECIES	11	ENSFALG00000013119	SLC22A23 (ENSFALG00000026713)	PXDC1 (ENSFALG00000013145)	PRPF4B (ENSFALG00000013150)	ECI2 (ENSFALG00000013156)	ENSFALG00000013160 #7	RPP40 (ENSFALG00000013166) #8	LYRM4 (ENSFALG00000013168)	FARS2 (ENSFALG00000013171) #12	NRN1 (ENSFALG00000013174) #13	F13A1 (ENSFALG00000013198) #14	LY86 (ENSFALG00000013228) #15	RREB1 (ENSFALG00000013231) #16	SSR1 (ENSFALG00000028864) #17	RIOK1 (ENSFALG00000013244) #20	DSP (ENSFALG00000013249) #22	BMP6 (ENSFALG00000013255) #24	TXNDC5 (ENSFALG00000026707) #25	EEF1E1 (ENSFALG00000013278) #28	SLC35B3 (ENSFALG00000023774) #29	ENSFALG00000013295 #32	TFAP2A (ENSFALG00000027663) #33	ENSFALG00000027486	ENSFALG00000025950	MAK (ENSFALG00000013327)	GCM2 (ENSFALG00000013344)	ELOVL2 (ENSFALG00000025547)	SMIM13 (ENSFALG00000024469)	NEDD9 (ENSFALG00000013359)	TMEM170B (ENSFALG00000023137)	ADTRP (ENSFALG00000013364)
Great tit	MODERN SPECIES	11	PSMG4 (ENSPMJG00000018368)	SLC22A23 (ENSPMJG00000018363)	PXDC1 (ENSPMJG00000018361)	PRPF4B (ENSPMJG00000018359)	ECI2 (ENSPMJG00000018355)	ENSPMJG00000018353 #7	RPP40 (ENSPMJG00000018352) #8	ENSPMJG00000018350	FARS2 (ENSPMJG00000018349) #12	NRN1 (ENSPMJG00000018347) #13	F13A1 (ENSPMJG00000018345) #14	LY86 (ENSPMJG00000018344) #15	RREB1 (ENSPMJG00000018339) #16	SSR1 (ENSPMJG00000018338) #17	RIOK1 (ENSPMJG00000018337) #20	DSP (ENSPMJG00000018334) #22	BMP6 (ENSPMJG00000018312) #24	TXNDC5 (ENSPMJG00000018310) #25	BLOC1S5 (ENSPMJG00000018309) #27	EEF1E1 (ENSPMJG00000018306) #28	SLC35B3 (ENSPMJG00000018303) #29	ENSPMJG00000018296 #32	TFAP2A (ENSPMJG00000018293) #33	ENSPMJG00000018289 #35	ENSPMJG00000018288	MAK (ENSPMJG00000018286)	GCM2 (ENSPMJG00000018284)	ELOVL2 (ENSPMJG00000018280)	SMIM13 (ENSPMJG00000018278)	NEDD9 (ENSPMJG00000018272)	TMEM170B (ENSPMJG00000018271)
African ostrich	MODERN SPECIES	726	SLC22A23 (ENSSCUG00000010819)	PXDC1 (ENSSCUG00000010818)	PRPF4B (ENSSCUG00000010810)	ECI2 (ENSSCUG00000010805)	ENSSCUG00000010792 #7	RPP40 (ENSSCUG00000010789) #8	ENSSCUG00000010786	FARS2 (ENSSCUG00000010782) #12	NRN1 (ENSSCUG00000010777) #13	F13A1 (ENSSCUG00000010770) #14	LY86 (ENSSCUG00000010764) #15	RREB1 (ENSSCUG00000010760) #16	SSR1 (ENSSCUG00000010751) #17	ENSSCUG00000010744	RIOK1 (ENSSCUG00000010739) #20	DSP (ENSSCUG00000010716) #22	BMP6 (ENSSCUG00000010707) #24	TXNDC5 (ENSSCUG00000010704) #25	ENSSCUG00000010701	EEF1E1 (ENSSCUG00000010698) #28	SLC35B3 (ENSSCUG00000010692) #29	ENSSCUG00000010673	GCNT2 (ENSSCUG00000010668) #35	ENSSCUG00000010667	MAK (ENSSCUG00000010660)	GCM2 (ENSSCUG00000010649)	SYCP2L (ENSSCUG00000010645)	ELOVL2 (ENSSCUG00000010641)	SMIM13 (ENSSCUG00000010640)	NEDD9 (ENSSCUG00000010636)	TMEM170B (ENSSCUG00000010631)
Lepidosauria	ANCESTRAL SPECIES	2	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Toxicofera	ANCESTRAL SPECIES	8	ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a	ENSGT00560000078630
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000157354	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163681	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b.b
Elapidae_a	ANCESTRAL SPECIES	14	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000154590	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b.b	ENSGT00940000160424
Acanthophiinae	ANCESTRAL SPECIES	16	ENSGT00390000009209	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000154590	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.a #35	ENSGT00940000154772.c.a.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT01050000244838.C.a	ENSGT00560000078630	ENSGT00950000183008.a.a.a.b.b	ENSGT00940000160424
Mainland tiger snake	MODERN SPECIES	84	PXDC1 (ENSNSUG00000005538)	PRPF4B (ENSNSUG00000005540)	ECI2 (ENSNSUG00000005541)	ENSNSUG00000005548 #7	RPP40 (ENSNSUG00000005551) #8	PPP1R3G (ENSNSUG00000005553)	LYRM4 (ENSNSUG00000005554)	FARS2 (ENSNSUG00000005555) #12	NRN1 (ENSNSUG00000005557) #13	F13A1 (ENSNSUG00000005558) #14	LY86 (ENSNSUG00000005567) #15	RREB1 (ENSNSUG00000005568) #16	SSR1 (ENSNSUG00000005581) #17	ENSNSUG00000005582	RIOK1 (ENSNSUG00000005588) #20	DSP (ENSNSUG00000005594) #22	BMP6 (ENSNSUG00000005636) #24	TXNDC5 (ENSNSUG00000005639) #25	BLOC1S5 (ENSNSUG00000005649) #27	EEF1E1 (ENSNSUG00000005652) #28	SLC35B3 (ENSNSUG00000005655) #29	ENSNSUG00000005659 #32	TFAP2A (ENSNSUG00000005662) #33
Eastern brown snake	MODERN SPECIES	75	PRPF4B (ENSPTXG00000014832)	ECI2 (ENSPTXG00000014830)	ENSPTXG00000014829 #7	RPP40 (ENSPTXG00000014825) #8	PPP1R3G (ENSPTXG00000014818)	LYRM4 (ENSPTXG00000014817)	ENSPTXG00000014816	FARS2 (ENSPTXG00000014815) #12	NRN1 (ENSPTXG00000014810) #13	F13A1 (ENSPTXG00000014807) #14	LY86 (ENSPTXG00000014806) #15	RREB1 (ENSPTXG00000014803) #16	SSR1 (ENSPTXG00000014799) #17	ENSPTXG00000014798	RIOK1 (ENSPTXG00000014797) #20	DSP (ENSPTXG00000014796) #22	BMP6 (ENSPTXG00000014794) #24	TXNDC5 (ENSPTXG00000014793) #25	BLOC1S5 (ENSPTXG00000014792) #27	EEF1E1 (ENSPTXG00000014790) #28	SLC35B3 (ENSPTXG00000014788) #29	ENSPTXG00000014787	ENSPTXG00000014786 #32	TFAP2A (ENSPTXG00000014783) #33	GCNT2 (ENSPTXG00000014782) #35	ENSPTXG00000014781	MAK (ENSPTXG00000014780)	GCM2 (ENSPTXG00000014779)	ELOVL2 (ENSPTXG00000014778)
Blue-lipped sea krait	MODERN SPECIES	5461																DSP (ENSLLTG00000016016) #22
Indian cobra	MODERN SPECIES	2	SLC22A23 (ENSNNAG00000016441)	PXDC1 (ENSNNAG00000016457)	PRPF4B (ENSNNAG00000007587)	ECI2 (ENSNNAG00000008208)	ENSNNAG00000008323 #7	RPP40 (ENSNNAG00000008348) #8	PPP1R3G (ENSNNAG00000008372)	LYRM4 (ENSNNAG00000008378)	FARS2 (ENSNNAG00000008399) #12	NRN1 (ENSNNAG00000008461) #13	F13A1 (ENSNNAG00000008507) #14	LY86 (ENSNNAG00000008627) #15	RREB1 (ENSNNAG00000008698) #16	SSR1 (ENSNNAG00000009475) #17	RIOK1 (ENSNNAG00000009587) #20	DSP (ENSNNAG00000009909) #22	BMP6 (ENSNNAG00000011380) #24	TXNDC5 (ENSNNAG00000011413) #25	BLOC1S5 (ENSNNAG00000011478) #27	EEF1E1 (ENSNNAG00000011508) #28	SLC35B3 (ENSNNAG00000011533) #29	ENSNNAG00000011584	TFAP2A (ENSNNAG00000011766) #33	GCNT2 (ENSNNAG00000011819) #35	ENSNNAG00000011834	MAK (ENSNNAG00000011853)	GCM2 (ENSNNAG00000011897)	ELOVL2 (ENSNNAG00000011943)	ENSNNAG00000011965	ENSNNAG00000011977	ENSNNAG00000011990
Lizard	MODERN SPECIES	823											ENSACAG00000013224 #7	ENSACAG00000026573	ENSACAG00000002698	ENSACAG00000039386	ENSACAG00000028565	ENSACAG00000002761 #22	TXNDC5 (ENSACAG00000003016) #25	ENSACAG00000043449	BMP6 (ENSACAG00000002841) #24	ENSACAG00000037857	bloc1s5 (ENSACAG00000037511) #27	eef1e1 (ENSACAG00000037514) #28	ENSACAG00000036636	SLC35B3 (ENSACAG00000041569) #29	ENSACAG00000024900	TFAP2A (ENSACAG00000008801) #33	ENSACAG00000036213	GCNT2 (ENSACAG00000022350) #35	ENSACAG00000037790	ENSACAG00000021049	MAK (ENSACAG00000008708)
Laterata	ANCESTRAL SPECIES	5	ENSGT00940000154543.b	ENSGT00390000008360	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000001805 #18	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000163455 #32	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849.jc.b #35	ENSGT00940000156849.jc.a.c #35	ENSGT00940000154772.c.a	ENSGT00940000156581	ENSGT00390000006777.b	ENSGT00530000063859.a	ENSGT01050000244838.C.a
Common wall lizard	MODERN SPECIES	15	RPP40 (ENSPMRG00000005289) #8	PPP1R3G (ENSPMRG00000005280)	LYRM4 (ENSPMRG00000005276)	ENSPMRG00000005274	ENSPMRG00000005272	FARS2 (ENSPMRG00000005269) #12	NRN1 (ENSPMRG00000005263) #13	F13A1 (ENSPMRG00000005249) #14	LY86 (ENSPMRG00000005240) #15	RREB1 (ENSPMRG00000005225) #16	ENSPMRG00000005219	ENSPMRG00000005214	SSR1 (ENSPMRG00000005200) #17	ENSPMRG00000005170 #18	RIOK1 (ENSPMRG00000005143) #20	DSP (ENSPMRG00000005114) #22	ENSPMRG00000005106	ENSPMRG00000005101	BMP6 (ENSPMRG00000005095) #24	TXNDC5 (ENSPMRG00000005084) #25	BLOC1S5 (ENSPMRG00000005078) #27	EEF1E1 (ENSPMRG00000005071) #28	SLC35B3 (ENSPMRG00000005065) #29	ENSPMRG00000005053	ENSPMRG00000005001	TFAP2A (ENSPMRG00000004984) #33	ENSPMRG00000004981	ENSPMRG00000004978 #35	ENSPMRG00000004975 #35	ENSPMRG00000004973 #35	ENSPMRG00000004969
Argentine black and white tegu	MODERN SPECIES	4	PRPF4B (ENSSMRG00000008213)	ENSSMRG00000008212	ECI2 (ENSSMRG00000008211)	ENSSMRG00000008195	ENSSMRG00000008170 #7	RPP40 (ENSSMRG00000008143) #8	PPP1R3G (ENSSMRG00000008139)	LYRM4 (ENSSMRG00000008133)	FARS2 (ENSSMRG00000008101) #12	NRN1 (ENSSMRG00000008058) #13	F13A1 (ENSSMRG00000006851) #14	LY86 (ENSSMRG00000006825) #15	RREB1 (ENSSMRG00000006781) #16	SSR1 (ENSSMRG00000006761) #17	RIOK1 (ENSSMRG00000006740) #20	DSP (ENSSMRG00000006722) #22	ENSSMRG00000006691	BMP6 (ENSSMRG00000006688) #24	TXNDC5 (ENSSMRG00000006683) #25	BLOC1S5 (ENSSMRG00000006676) #27	EEF1E1 (ENSSMRG00000006672) #28	SLC35B3 (ENSSMRG00000006664) #29	ENSSMRG00000006625 #32	TFAP2A (ENSSMRG00000006603) #33	ENSSMRG00000006591 #35	ENSSMRG00000006578 #35	ENSSMRG00000006575	MAK (ENSSMRG00000006551)	GCM2 (ENSSMRG00000006546)	SYCP2L (ENSSMRG00000006520)	ELOVL2 (ENSSMRG00000006513)
tuatara	MODERN SPECIES	1513													RREB1 (ENSSPUG00000007686) #16	SSR1 (ENSSPUG00000007669) #17	RIOK1 (ENSSPUG00000007624) #20	DSP (ENSSPUG00000007581) #22	ENSSPUG00000007511	BMP6 (ENSSPUG00000007442) #24	TXNDC5 (ENSSPUG00000007429) #25	BLOC1S5 (ENSSPUG00000007421) #27	EEF1E1 (ENSSPUG00000007416) #28	SLC35B3 (ENSSPUG00000007398) #29	ENSSPUG00000007373	ENSSPUG00000007320	IL6ST (ENSSPUG00000007294)	IL31RA (ENSSPUG00000007279)	DDX4 (ENSSPUG00000007260)	SLC38A9 (ENSSPUG00000007124)	PLPP1 (ENSSPUG00000007100)	MTREX (ENSSPUG00000007071)	DHX29 (ENSSPUG00000006458)
Anura	ANCESTRAL SPECIES	1	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT01030000234639.A.a.bb.a.a	ENSGT01030000234639.A.a.bb.a.b	ENSGT00940000161906	ENSGT01000000214902	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00390000002792	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00390000004886 #23	ENSGT00940000158302.e	ENSGT00940000153769.B	ENSGT00940000165685	ENSGT00940000158768 #24	ENSGT00940000156920 #25	ENSGT00390000016974 #27	ENSGT00390000003564 #28	ENSGT00940000157040 #29	ENSGT00940000168622	ENSGT00950000182848.c.b.a.a #33	ENSGT00940000156849 #35	ENSGT00390000001263	ENSGT00940000156581	ENSGT00390000006777.b
Leishan spiny toad	MODERN SPECIES	8	ENSLLEG00000006642	ENSLLEG00000006631	ENSLLEG00000006617	ENSLLEG00000006575	FARS2 (ENSLLEG00000006461) #12	ENSLLEG00000006433	NRN1 (ENSLLEG00000006409) #13	ENSLLEG00000006337	F13A1 (ENSLLEG00000006249) #14	ENSLLEG00000006221	ENSLLEG00000006212	RREB1 (ENSLLEG00000005897) #16	SSR1 (ENSLLEG00000005776) #17	ENSLLEG00000005706	RIOK1 (ENSLLEG00000005581) #20	DSP (ENSLLEG00000005465) #22	ENSLLEG00000005443	ENSLLEG00000005421	SNRNP48 (ENSLLEG00000005332) #23	ENSLLEG00000023399	ENSLLEG00000023259	ENSLLEG00000023242	ENSLLEG00000023096	BMP6 (ENSLLEG00000023001) #24	TXNDC5 (ENSLLEG00000022963) #25	ENSLLEG00000022940	ENSLLEG00000022876 #27	ENSLLEG00000022828 #28	ENSLLEG00000022813	ENSLLEG00000022794	SLC35B3 (ENSLLEG00000022238) #29
Frog	MODERN SPECIES	6	ENSXETG00000038879	ENSXETG00000040470	ENSXETG00000033600	lyrm4 (ENSXETG00000038488)	fars2 (ENSXETG00000031776) #12	nrn1 (ENSXETG00000048603) #13	f13a1 (ENSXETG00000031039) #14	ENSXETG00000046846	ENSXETG00000038290	rreb1 (ENSXETG00000015435) #16	ssr1 (ENSXETG00000020431) #17	rbm22 (ENSXETG00000020435)	riok1 (ENSXETG00000020436) #20	ENSXETG00000039036	ENSXETG00000044901	dsp (ENSXETG00000020444) #22	snrnp48 (ENSXETG00000020447) #23	ENSXETG00000036203	ENSXETG00000020448	XB941699 [provisional] (ENSXETG00000024633)	bmp6 (ENSXETG00000024635) #24	txndc5 (ENSXETG00000020457) #25	eef1e1 (ENSXETG00000020459) #28	ENSXETG00000042395	slc35b3 (ENSXETG00000020461) #29	ENSXETG00000037854	tfap2a (ENSXETG00000001074) #33	ENSXETG00000030703 #35	tbc1d7 (ENSXETG00000001072) #35	tmem14c (ENSXETG00000048256)	mak (ENSXETG00000001069)
Coelacanth	MODERN SPECIES	2200																DSP (ENSLACG00000005036) #22	SNRNP48 (ENSLACG00000003958) #23	ENSLACG00000000624
Actinopterygii	ANCESTRAL SPECIES	218	ENSGT00390000009209	ENSGT00910000144592	ENSGT00940000155562	ENSGT00940000155105	ENSGT00940000155106 #7	ENSGT00390000014167 #8	ENSGT00940000163747	ENSGT00940000157289.a	ENSGT00940000158071 #12	ENSGT00530000063853.a.a.b #13	ENSGT01050000244939.a.a.a #14	ENSGT00390000018605 #15	ENSGT00940000157533 #16	ENSGT00400000022103.a #17	ENSGT00940000157075 #20	ENSGT00940000154843.F #22	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C
Reedfish	MODERN SPECIES	14	pign (ENSECRG00000002263)	ENSECRG00000002288	SFRP4 (ENSECRG00000002301)	epdr1 (ENSECRG00000002312)	eci2 (ENSECRG00000002330)	CDY1 (ENSECRG00000002367) #7	RPP40 (ENSECRG00000002392) #8	ENSECRG00000002424	LYRM4 (ENSECRG00000002454)	fars2 (ENSECRG00000002463) #12	nrn1a (ENSECRG00000002479) #13	f13a1b (ENSECRG00000002498) #14	RREB1 (ENSECRG00000002539) #16	ssr1 (ENSECRG00000002570) #17	riok1 (ENSECRG00000002592) #20	DSP (ENSECRG00000002661) #22	TNS3 (ENSECRG00000002744)	igfbp3 (ENSECRG00000002820)	igfbp1a (ENSECRG00000002826)	adcy1b (ENSECRG00000002837)	ENSECRG00000002857	gli3 (ENSECRG00000002867)	ENSECRG00000002880	inhbab (ENSECRG00000002889)	sugct (ENSECRG00000002898)	mplkip (ENSECRG00000002911)	ENSECRG00000002922	ralab (ENSECRG00000002936)	ENSECRG00000002949	ENSECRG00000002960	ENSECRG00000002974
Neopterygii	ANCESTRAL SPECIES	100	ENSGT00440000033640	ENSGT00940000156211.a.b	ENSGT00940000162303.a.b	ENSGT00940000156211.a.a	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000159059	ENSGT00940000157153	ENSGT00940000159347	ENSGT00390000004746	ENSGT00940000154150	ENSGT00940000167364	ENSGT00940000157354	ENSGT00940000154843.F #22	ENSGT00940000156328.b	ENSGT00940000158092	ENSGT00940000157394	ENSGT00940000154872.C	ENSGT00990000209355	ENSGT00940000155842	ENSGT00390000009122	ENSGT01050000244838.C.a	ENSGT00530000063859.a	ENSGT00390000006777.b	ENSGT00940000156581	ENSGT00940000154772	ENSGT00390000001263	ENSGT00940000166060	ENSGT00940000156849 #35
Spotted gar	MODERN SPECIES	675	serpinb1 (ENSLOCG00000012967)	wrnip1 (ENSLOCG00000012970)	MYLK4 (ENSLOCG00000012976)	gmds (ENSLOCG00000012983)	foxc1a (ENSLOCG00000018165)	ENSLOCG00000012987	foxq1a (ENSLOCG00000012990)	exoc2 (ENSLOCG00000012994)	irf4a (ENSLOCG00000013008)	dusp22b (ENSLOCG00000013015)	ripk1l (ENSLOCG00000013018)	BPHL (ENSLOCG00000013027)	tubb2 (ENSLOCG00000013034)	ENSLOCG00000013039	slc22a23 (ENSLOCG00000013043)	DSP (ENSLOCG00000013051) #22	TNS3 (ENSLOCG00000013065)	igfbp3 (ENSLOCG00000013080)	igfbp1a (ENSLOCG00000013086)	adcy1b (ENSLOCG00000013092)	sirt5 (ENSLOCG00000013106)	ENSLOCG00000013110	PHACTR1 (ENSLOCG00000013116)	tbc1d7 (ENSLOCG00000013127)	elovl2 (ENSLOCG00000013133)	SYCP2L (ENSLOCG00000013137)	gcm2 (ENSLOCG00000013145)	ENSLOCG00000013148	ENSLOCG00000013151	tmem14ca (ENSLOCG00000013157)	pak1ip1 (ENSLOCG00000013164)
Osteoglossocephalai	ANCESTRAL SPECIES	166	ENSGT00940000162303.a.b	ENSGT00940000163866.a.a	ENSGT00940000162937.a.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000159059	ENSGT00940000157153	ENSGT00940000159347	ENSGT00390000004746	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000156328.b	ENSGT00940000158092.o	ENSGT00940000157394.a	ENSGT00940000154872.B	ENSGT00940000156080.l	ENSGT00940000155842.s	ENSGT00940000157562.r	ENSGT00990000209355	ENSGT00940000155842.t	ENSGT00390000009122
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	36	ENSGT00390000014839.a	ENSGT00940000159126	ENSGT00940000160805	ENSGT00940000164727	ENSGT01100000263569.a.a	ENSGT00940000158974.cb	ENSGT00940000154365.a.a	ENSGT00940000159586	ENSGT00390000015871	ENSGT00940000159905	ENSGT00950000183032.A.b.b.a	ENSGT00940000159059.h	ENSGT00940000157153.y	ENSGT00940000159347.e	ENSGT00940000157354.j	ENSGT00940000154843.F.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.s.a	ENSGT00940000158137.c.a.d	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.db	ENSGT00950000182909.b.a.a.cb	ENSGT00940000158019.k	ENSGT00940000153229.A.a.b	ENSGT01030000234624.b.b.c.b	ENSGT01030000234624.a.u	ENSGT00940000155981.f
Asian bonytongue	MODERN SPECIES	22	atg9b (ENSSFOG00015009299)	abcb8 (ENSSFOG00015009232)	cdk5 (ENSSFOG00015009165)	asic1c (ENSSFOG00015009088)	zgc:92591 (ENSSFOG00015028630)	asb10 (ENSSFOG00015009013)	gbx1 (ENSSFOG00015032296)	AGAP3 (ENSSFOG00015008908)	RB1CC1 (ENSSFOG00015008736)	ENSSFOG00015008666	ENSSFOG00015008619	irf4a (ENSSFOG00015008571)	dusp22b (ENSSFOG00015008499)	ripk1l (ENSSFOG00015008445)	slc22a23 (ENSSFOG00015008389)	DSP (ENSSFOG00015008351) #22	TNS3 (ENSSFOG00015008230)	IGFBP3 (ENSSFOG00015025701)	igfbp1b (ENSSFOG00015028265)	adcy1b (ENSSFOG00015008135)	SIRT5 (ENSSFOG00015008096)	PHACTR1 (ENSSFOG00015008053)	PHLPP1 (ENSSFOG00015007990)	MEP1B (ENSSFOG00015007921)	ENSSFOG00015007893	RNF138 (ENSSFOG00015007868)	b4galt6 (ENSSFOG00015007826)	ttr (ENSSFOG00015025678)	ENSSFOG00015007786	dsc2l (ENSSFOG00015007750)	cdh2 (ENSSFOG00015028429)
P. kingsleyae	MODERN SPECIES	15	atg9b (ENSPKIG00000005206)	abcb8 (ENSPKIG00000005114)	cdk5 (ENSPKIG00000005046)	ENSPKIG00000004980	zgc:92591 (ENSPKIG00000004929)	asb10 (ENSPKIG00000004900)	gbx1 (ENSPKIG00000004870)	AGAP3 (ENSPKIG00000004850)	RB1CC1 (ENSPKIG00000004705)	ENSPKIG00000004448	ENSPKIG00000004373	irf4a (ENSPKIG00000004352)	dusp22b (ENSPKIG00000004330)	ripk1l (ENSPKIG00000004307)	slc22a23 (ENSPKIG00000004246)	DSP (ENSPKIG00000004145) #22	TNS3 (ENSPKIG00000004086)	ENSPKIG00000004066	IGFBP3 (ENSPKIG00000004049)	igfbp1b (ENSPKIG00000004028)	adcy1b (ENSPKIG00000003972)	SIRT5 (ENSPKIG00000003892)	PHACTR1 (ENSPKIG00000003807)	ENSPKIG00000003763	MEP1B (ENSPKIG00000003729)	ENSPKIG00000003701	RNF138 (ENSPKIG00000003672)	b4galt6 (ENSPKIG00000003603)	ttr (ENSPKIG00000003564)	ENSPKIG00000003532	dsc2l (ENSPKIG00000003499)
Osteoglossiformes	ANCESTRAL SPECIES	119	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640	ENSGT00940000162303.a.b	ENSGT00940000163866.a.b	ENSGT00940000163866.a.a	ENSGT00940000162937.a.b	ENSGT00390000010872	ENSGT00940000159059.g	ENSGT00940000157153.z	ENSGT00940000159347.f	ENSGT00390000004746	ENSGT00940000154150	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.b #22	ENSGT00940000156328.b	ENSGT00940000158092.o	ENSGT00940000157394.a	ENSGT00940000154872.B	ENSGT00940000156080.l	ENSGT00940000155842.s.b	ENSGT00390000009122	ENSGT00940000158137.c.a.c	ENSGT00950000183102.A.b.a	ENSGT00390000000568	ENSGT01100000263524.B.b.b	ENSGT00940000158019.l	ENSGT01030000234624.b.b.d.a.a	ENSGT01030000234624.b.b.d.b	ENSGT01030000234624.a.v
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	20	ppp1r42 (ENSPKIG00000009308)	cops5 (ENSPKIG00000009291)	SERPINB1 (ENSPKIG00000009257)	MYLK4 (ENSPKIG00000009177)	gmds (ENSPKIG00000009075)	FOXC1 (ENSPKIG00000009037)	ENSPKIG00000009023	exoc2 (ENSPKIG00000008891)	irf4a (ENSPKIG00000008792)	DUSP22 (ENSPKIG00000008750)	BPHL (ENSPKIG00000008728)	TUBB2B (ENSPKIG00000008719)	ENSPKIG00000008638	ENSPKIG00000008624	SLC22A23 (ENSPKIG00000008590)	DSP (ENSPKIG00000008536) #22	DSP (ENSPKIG00000008493) #22	ENSPKIG00000008447	ENSPKIG00000008426	igfbp3 (ENSPKIG00000008313)	igfbp1a (ENSPKIG00000008217)	adcy1a (ENSPKIG00000008108)	sirt5 (ENSPKIG00000008055)	ENSPKIG00000008041	ENSPKIG00000008026	tbc1d7 (ENSPKIG00000007972)	PHLPP1 (ENSPKIG00000007909)	si:ch211-191a24.4 (ENSPKIG00000007876)	mcm3l (ENSPKIG00000007826)	TRAPPC8 (ENSPKIG00000007667)	ENSPKIG00000007592
P. kingsleyae	MODERN SPECIES	20	cops5 (ENSPKIG00000009291)	SERPINB1 (ENSPKIG00000009257)	MYLK4 (ENSPKIG00000009177)	gmds (ENSPKIG00000009075)	FOXC1 (ENSPKIG00000009037)	ENSPKIG00000009023	exoc2 (ENSPKIG00000008891)	irf4a (ENSPKIG00000008792)	DUSP22 (ENSPKIG00000008750)	BPHL (ENSPKIG00000008728)	TUBB2B (ENSPKIG00000008719)	ENSPKIG00000008638	ENSPKIG00000008624	SLC22A23 (ENSPKIG00000008590)	DSP (ENSPKIG00000008536) #22	DSP (ENSPKIG00000008493) #22	ENSPKIG00000008447	ENSPKIG00000008426	igfbp3 (ENSPKIG00000008313)	igfbp1a (ENSPKIG00000008217)	adcy1a (ENSPKIG00000008108)	sirt5 (ENSPKIG00000008055)	ENSPKIG00000008041	ENSPKIG00000008026	tbc1d7 (ENSPKIG00000007972)	PHLPP1 (ENSPKIG00000007909)	si:ch211-191a24.4 (ENSPKIG00000007876)	mcm3l (ENSPKIG00000007826)	TRAPPC8 (ENSPKIG00000007667)	ENSPKIG00000007592	B4GALT5 (ENSPKIG00000007532)
Asian bonytongue	MODERN SPECIES	10	ENSSFOG00015014090	serpinb1 (ENSSFOG00015031077)	MYLK4 (ENSSFOG00015014044)	gmds (ENSSFOG00015032528)	foxc1a (ENSSFOG00015018620)	ENSSFOG00015013941	foxq1a (ENSSFOG00015029527)	exoc2 (ENSSFOG00015013797)	irf4a (ENSSFOG00015013722)	DUSP22 (ENSSFOG00015013700)	ripk1l (ENSSFOG00015013668)	BPHL (ENSSFOG00015032944)	ENSSFOG00015013649	ENSSFOG00015013633	SLC22A23 (ENSSFOG00015013601)	DSP (ENSSFOG00015013531) #22	TNS3 (ENSSFOG00015013361)	igfbp3 (ENSSFOG00015030365)	igfbp1a (ENSSFOG00015025197)	adcy1a (ENSSFOG00015013194)	sirt5 (ENSSFOG00015027400)	PHACTR1 (ENSSFOG00015013145)	tbc1d7 (ENSSFOG00015013112)	PHLPP1 (ENSSFOG00015011540)	si:ch211-191a24.4 (ENSSFOG00015011524)	mcm3l (ENSSFOG00015011464)	TRAPPC8 (ENSSFOG00015011261)	opn7a (ENSSFOG00015011229)	B4GALT5 (ENSSFOG00015026026)	ENSSFOG00015011178	ENSSFOG00015030217
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	271														ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Otomorpha	ANCESTRAL SPECIES	231					ENSGT00940000156450.d	ENSGT00940000175752	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038.c.b	ENSGT00530000063497.b	ENSGT00940000165852	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.s	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Otophysi	ANCESTRAL SPECIES	336					ENSGT00940000158038.c.b	ENSGT00940000160247	ENSGT00940000160126	ENSGT00940000175752	ENSGT00940000156450.d	ENSGT00940000165852	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b	ENSGT00940000154150.hf.a	ENSGT00940000154150.if	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22
Characiphysae	ANCESTRAL SPECIES	121																ENSGT00940000154843.F.c.a #22	ENSGT00940000161593.a	ENSGT01060000248962	ENSGT00510000047568	ENSGT00530000063106.A.t	ENSGT00940000179716	ENSGT01030000234573.A.b.a.c	ENSGT00940000155665.b	ENSGT00520000055591.a.b	ENSGT00970000195602	ENSGT00530000063187.B.d	ENSGT00940000156259.a.b.b	ENSGT00940000158629	ENSGT00940000155815.q	ENSGT00390000005590	ENSGT00940000165468
Channel catfish	MODERN SPECIES	26	CCL36.13 (ENSIPUG00000004956)	ENSIPUG00000004974	ENSIPUG00000005014	ENSIPUG00000005019	ENSIPUG00000005035	ENSIPUG00000005039	rock1 (ENSIPUG00000005068)	usp14 (ENSIPUG00000005153)	thoc1 (ENSIPUG00000005306)	aqp1a.2 (ENSIPUG00000005340)	ENSIPUG00000005352	aqp1a.1 (ENSIPUG00000005359)	ENSIPUG00000005391	ENSIPUG00000005432	myl13 (ENSIPUG00000005554)	DSP (ENSIPUG00000005599) #22	ENSIPUG00000005733	ENSIPUG00000005740	eif2b5 (ENSIPUG00000005756)	ENSIPUG00000005812	dis3l2 (ENSIPUG00000005868)	mier1 (ENSIPUG00000005974)	slc35d1b (ENSIPUG00000005991)	SERBP1 (ENSIPUG00000006028)	ENSIPUG00000006073	ENSIPUG00000006084	CYP8B1 (ENSIPUG00000006096)	CYP8B1 (ENSIPUG00000006105)	CYP8B1 (ENSIPUG00000006112)	GJC1 (ENSIPUG00000006118)	iba57 (ENSIPUG00000006129)
Characiphysae_b	ANCESTRAL SPECIES	197																ENSGT00940000154843.F.c.a #22	ENSGT00940000161593.a	ENSGT01060000248962	ENSGT00510000047568	ENSGT00530000063106.A.t	ENSGT00940000179716	ENSGT01030000234573.A.b.a.c	ENSGT00940000155665.b	ENSGT00520000055591.a.b	ENSGT00970000195602	ENSGT00530000063187.B.d	ENSGT00940000156259.a.b.b	ENSGT00940000158629	ENSGT00940000155815.q	ENSGT00390000005590	ENSGT00940000165468
Characoidei	ANCESTRAL SPECIES																	ENSGT00940000154843.F.c.a #22
Red-bellied piranha	MODERN SPECIES	1764																DSP (ENSPNAG00000019131) #22	ENSPNAG00000019115
Mexicana tetra	MODERN SPECIES	51																DSP (ENSAMXG00000001574) #22	ENSAMXG00000043050	ENSAMXG00000030224	ENSAMXG00000001626	ENSAMXG00000035986	ENSAMXG00000009741	ENSAMXG00000037889	ENSAMXG00000041566	ENSAMXG00000033322	ENSAMXG00000040630	ENSAMXG00000036257	ENSAMXG00000031654	ENSAMXG00000040964	ENSAMXG00000039584	ENSAMXG00000034524	cyp8b1.2 (ENSAMXG00000019923)
Electric eel	MODERN SPECIES	549																DSP (ENSEEEG00000002304) #22	ENSEEEG00000002309	ENSEEEG00000002312	ENSEEEG00000002316	ENSEEEG00000002317	ENSEEEG00000002318	eif2b5 (ENSEEEG00000002322)	ENSEEEG00000002360	DIS3L2 (ENSEEEG00000002383)	ENSEEEG00000002509	mier1b (ENSEEEG00000002510)	slc35d1b (ENSEEEG00000002516)	SERBP1 (ENSEEEG00000002520)	ENSEEEG00000002523	ENSEEEG00000002532	pik3r3a (ENSEEEG00000002550)
Cyprinoidei	ANCESTRAL SPECIES	343														ENSGT00940000154150.if	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	165	ENSGT00940000155601.h.c	ENSGT00390000004912.h	ENSGT00940000163206.b.a.b.b	ENSGT00940000159287.m.d	ENSGT00940000156352.h.b	ENSGT01030000234624.b.b.c.b.d	ENSGT00940000158749.r.b	ENSGT00530000063460.A.a.f.a	ENSGT00940000158038.c.b.b	ENSGT00940000163111.a.b	ENSGT00940000156348.B.m.a	ENSGT00940000165852.d	ENSGT00390000007688.a.b.b	ENSGT00940000154150.if	ENSGT00940000157354.j.a	ENSGT00940000154843.F.c.a.a #22	ENSGT00940000158574.c.b	ENSGT01030000234570.d.b.a.b.b.b.j	ENSGT00940000156795.f	ENSGT00940000157015.i.a.i	ENSGT00940000157015.i.b.b.a	ENSGT00390000016232.r	ENSGT00390000009615.r	ENSGT01030000234517.A.m	ENSGT00510000047568.b	ENSGT00530000063187.B.d	ENSGT00940000156259.a.b.b.a	ENSGT00940000155815.q.b	ENSGT00390000005590	ENSGT00940000160510.c	ENSGT00940000159618.c
Cyprininae_a	ANCESTRAL SPECIES	259	ENSGT00940000159287.m.d	ENSGT00940000156352.h.b	ENSGT01030000234624.b.b.c.b.d	ENSGT00940000158749.r.b	ENSGT00390000013685.b	ENSGT00530000063460.A.a.f.a	ENSGT00940000158038.c.b.b	ENSGT00940000163111.a.b	ENSGT00940000156348.B.m.a	ENSGT00940000153348.B.d	ENSGT00940000165852.d	ENSGT00390000007688.a.b.b	ENSGT00940000154150.hf.b	ENSGT00940000154150.if	ENSGT00940000157354.j.a	ENSGT00940000154843.F.c.a.a #22
Golden-line barbel	MODERN SPECIES	1190														ENSSGRG00000011851	slc22a23 (ENSSGRG00000011847)	DSP (ENSSGRG00000011017) #22	ENSSGRG00000010958	ENSSGRG00000010949	tmie (ENSSGRG00000010948)	ENSSGRG00000010947	pth1r (ENSSGRG00000010944)	myl13 (ENSSGRG00000010942)	CRHR2 (ENSSGRG00000010902)	ENSSGRG00000010899	aqp1a.1 (ENSSGRG00000010896)	aqp1a.2 (ENSSGRG00000010889)	thoc1 (ENSSGRG00000010860)	usp14 (ENSSGRG00000010856)	ENSSGRG00000010855	rock1 (ENSSGRG00000007105)	eif2b5 (ENSSGRG00000006025)
Common carp reference	MODERN SPECIES	21	ENSCCRG00000027393	ss18 (ENSCCRG00000068968)	ENSCCRG00000021915	ENSCCRG00000021904	rpe65a (ENSCCRG00000021653)	ENSCCRG00000064432	si:ch211-188c16.1 (ENSCCRG00000021893)	dab1b (ENSCCRG00000058535)	prkacbb (ENSCCRG00000058517)	ENSCCRG00000000653	exosc4 (ENSCCRG00000068106)	ENSCCRG00000068981	ssx2ipa (ENSCCRG00000020755)	ENSCCRG00000077145	slc22a23 (ENSCCRG00000000245)	ENSCCRG00000004133 #22	higd1a (ENSCCRG00000061634)	ENSCCRG00000064351	tmie (ENSCCRG00000061065)	pth1r (ENSCCRG00000000322)	myl13 (ENSCCRG00000077228)	ENSCCRG00000007405	aqp1a.1 (ENSCCRG00000063379)	aqp1a.2 (ENSCCRG00000068182)	thoc1 (ENSCCRG00000007373)	usp14 (ENSCCRG00000005390)	rock1 (ENSCCRG00000009725)	ENSCCRG00000013420	ENSCCRG00000013424	pik3r3a (ENSCCRG00000013431)	guk1a (ENSCCRG00000013449)
Goldfish	MODERN SPECIES	11	polr2d (ENSCARG00000010625)	ENSCARG00000010636	ZNF521 (ENSCARG00000010648)	ss18 (ENSCARG00000010672)	ENSCARG00000010696	ENSCARG00000010711	si:ch211-188c16.1 (ENSCARG00000010725)	dab1b (ENSCARG00000010763)	prkacbb (ENSCARG00000010857)	ENSCARG00000011319	ENSCARG00000047202	ENSCARG00000047214	ssx2ipa (ENSCARG00000047224)	ENSCARG00000047244	slc22a23 (ENSCARG00000047265)	DSP (ENSCARG00000047306) #22	ENSCARG00000047535	ENSCARG00000047570	pth1r (ENSCARG00000047642)	myl13 (ENSCARG00000048731)	CRHR2 (ENSCARG00000048814)	ENSCARG00000049159	aqp1a.1 (ENSCARG00000049175)	aqp1a.2 (ENSCARG00000049277)	thoc1 (ENSCARG00000049321)	usp14 (ENSCARG00000049551)	rock1 (ENSCARG00000051534)	eif2b5 (ENSCARG00000053639)	ENSCARG00000054353	ENSCARG00000054363	ENSCARG00000054409
Cyprininae	ANCESTRAL SPECIES	66	ENSGT00950000182913.B.e	ENSGT00390000013685	ENSGT00940000175752	ENSGT00530000063460.A.a.f.b	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038.c.b.a	ENSGT01030000235262	ENSGT00940000156348.B.m.b	ENSGT00940000153348.B	ENSGT00940000165852.c	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b.a	ENSGT00940000154150.hf.a	ENSGT00940000157354.j.b	ENSGT00940000154843.F.c.a.b #22	ENSGT00940000154276	ENSGT00390000000596.g	ENSGT00940000164845	ENSGT00940000158574.c.a	ENSGT01030000234570.d.b.a.b.b.b.i	ENSGT00940000156795.e	ENSGT00940000157015.i.a.j	ENSGT00940000157015.i.b.b.b	ENSGT00390000016232.q	ENSGT00390000009615.q	ENSGT01030000234517.A.n	ENSGT00510000047568.a	ENSGT01060000248962	ENSGT00520000055591.a.b	ENSGT00940000156906.j.b
Cyprininae_a	ANCESTRAL SPECIES	98	ENSGT00950000182913.B.e	ENSGT00390000013685.a	ENSGT00940000175752	ENSGT00530000063460.A.a.f.b	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038.c.b.a	ENSGT01030000235262	ENSGT00940000156348.B.m.b	ENSGT00940000153348.B.c	ENSGT00940000165852.c	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b.a	ENSGT00940000154150.hf.a	ENSGT00940000157354.j.b	ENSGT00940000154843.F.c.a.b #22	ENSGT00940000154276	ENSGT00390000000596.h	ENSGT00390000000596.g	ENSGT00940000164845	ENSGT00940000158574.c.a	ENSGT01030000234570.d.b.a.b.b.b.i	ENSGT00940000156795.e	ENSGT00940000157015.i.a.j	ENSGT00940000157015.i.b.b.b	ENSGT00390000016232.q	ENSGT00390000009615.q	ENSGT01030000234517.A.n	ENSGT00510000047568.a	ENSGT01060000248962	ENSGT00520000055591.a.b
Common carp reference	MODERN SPECIES	29	si:ch211-188c16.1 (ENSCCRG00000021545)	C8A (ENSCCRG00000021535)	c8b (ENSCCRG00000021460)	dab1b (ENSCCRG00000021428)	prkacbb (ENSCCRG00000021027)	ENSCCRG00000082743	ENSCCRG00000072928	ENSCCRG00000008791	ENSCCRG00000020992	exosc4 (ENSCCRG00000063514)	ENSCCRG00000058328	ENSCCRG00000055008	ssx2ipa (ENSCCRG00000000282)	tubb2 (ENSCCRG00000082419)	slc22a23 (ENSCCRG00000004101)	ENSCCRG00000004106 #22	ENSCCRG00000079909	tmie (ENSCCRG00000078992)	pth1r (ENSCCRG00000058326)	myl13 (ENSCCRG00000042460)	ENSCCRG00000079755	ENSCCRG00000064335	aqp1a.1 (ENSCCRG00000009618)	aqp1a.2 (ENSCCRG00000058786)	ENSCCRG00000068034	thoc1 (ENSCCRG00000009585)	usp14 (ENSCCRG00000063203)	rock1 (ENSCCRG00000009200)	ENSCCRG00000010092	ENSCCRG00000065085	pik3r3a (ENSCCRG00000079471)
Golden-line barbel	MODERN SPECIES	175				TPP2 (ENSSGRG00000050649)	ENSSGRG00000050726	METTL21C (ENSSGRG00000050728)	trmt10c (ENSSGRG00000050729)	ENSSGRG00000050731	jam2a (ENSSGRG00000050733)	atp5pf (ENSSGRG00000050734)	APP (ENSSGRG00000050742)	cyyr1 (ENSSGRG00000051880)	ADAMTS1 (ENSSGRG00000051881)	ADAMTS5 (ENSSGRG00000051882)	ENSSGRG00000051886	DSP (ENSSGRG00000051887) #22	ENSSGRG00000051916	ENSSGRG00000051917	ENSSGRG00000051918	pth1r (ENSSGRG00000051919)	myl13 (ENSSGRG00000051920)	CRHR2 (ENSSGRG00000051923)	aqp1a.1 (ENSSGRG00000051928)	ENSSGRG00000051931	ENSSGRG00000051935	usp14 (ENSSGRG00000051937)	rock1 (ENSSGRG00000051985)	eif2b5 (ENSSGRG00000052835)	ENSSGRG00000052856	ENSSGRG00000052857	pik3r3a (ENSSGRG00000052860)
Goldfish	MODERN SPECIES	19	GPAA1 (ENSCARG00000015879)	ENSCARG00000015872	C8A (ENSCARG00000015847)	c8b (ENSCARG00000015777)	dab1b (ENSCARG00000015748)	prkacbb (ENSCARG00000013297)	ENSCARG00000013216	ENSCARG00000010757	exosc4 (ENSCARG00000023221)	ENSCARG00000023190	MCOLN3 (ENSCARG00000023120)	ssx2ipa (ENSCARG00000023098)	ENSCARG00000023086	ENSCARG00000023077	slc22a23 (ENSCARG00000023035)	DSP (ENSCARG00000021843) #22	ENSCARG00000021780	ENSCARG00000021772	tmie (ENSCARG00000021763)	pth1r (ENSCARG00000020465)	myl13 (ENSCARG00000020421)	ENSCARG00000020417	CRHR2 (ENSCARG00000019883)	aqp1a.1 (ENSCARG00000019850)	aqp1a.2 (ENSCARG00000019841)	thoc1 (ENSCARG00000019788)	usp14 (ENSCARG00000018178)	rock1 (ENSCARG00000017794)	eif2b5 (ENSCARG00000017437)	ENSCARG00000017406	ENSCARG00000017373
Zebrafish	MODERN SPECIES	11	rpe65a (ENSDARG00000007480)	GPAA1 (ENSDARG00000074571)	si:ch211-188c16.1 (ENSDARG00000077288)	c8b (ENSDARG00000039517)	c8a (ENSDARG00000039516)	dab1b (ENSDARG00000003290)	prkacbb (ENSDARG00000059125)	ENSDARG00000111712	ADGRL2 (ENSDARG00000075899)	exosc4 (ENSDARG00000103432)	ENSDARG00000077130	ENSDARG00000078363	ssx2ipa (ENSDARG00000039521)	tubb2 (ENSDARG00000039522)	slc22a23 (ENSDARG00000078856)	DSP (ENSDARG00000022309) #22	higd1a (ENSDARG00000022303)	ENSDARG00000063451	tmie (ENSDARG00000069423)	pth1r (ENSDARG00000020957)	myl13 (ENSDARG00000042245)	crhr2 (ENSDARG00000103704)	CRHR2 (ENSDARG00000062377)	ENSDARG00000114019	ENSDARG00000087421	aqp1a.1 (ENSDARG00000023713)	aqp1a.2 (ENSDARG00000091027)	thoc1 (ENSDARG00000088246)	usp14 (ENSDARG00000025889)	rock1 (ENSDARG00000058993)	eif2b5 (ENSDARG00000074995)
Clupeiformes	ANCESTRAL SPECIES	191		ENSGT00940000156450.d	ENSGT00530000063460.A.a	ENSGT00940000160126	ENSGT00940000160247	ENSGT00940000158038.c.b	ENSGT00950000182913.B.e	ENSGT00730000110988.wb.b.e	ENSGT00940000170421	ENSGT00530000063497.b	ENSGT00940000165852	ENSGT00950000183036.a.a.h	ENSGT00390000007688.a.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00390000010872	ENSGT00940000162937.a.a	ENSGT00440000033640
Atlantic herring	MODERN SPECIES	17	PSMA8 (ENSCHAG00000026807)	KCTD1 (ENSCHAG00000026830)	AQP4 (ENSCHAG00000026833)	CDH2 (ENSCHAG00000026938)	ENSCHAG00000027533	ENSCHAG00000000637	ENSCHAG00000001004	ENSCHAG00000001264	ENSCHAG00000001294	rpe65a (ENSCHAG00000001421)	dab1b (ENSCHAG00000003066)	c8b (ENSCHAG00000003222)	C8A (ENSCHAG00000003365)	ENSCHAG00000003398	ENSCHAG00000003418	DSP (ENSCHAG00000003527) #22	TNS3 (ENSCHAG00000005515)	IGFBP3 (ENSCHAG00000006509)	igfbp1b (ENSCHAG00000007437)	adcy1b (ENSCHAG00000007463)	ENSCHAG00000007997	PHACTR1 (ENSCHAG00000008026)	PHLPP1 (ENSCHAG00000008085)	MEP1B (ENSCHAG00000008256)	ENSCHAG00000008341	ripk1l (ENSCHAG00000008506)	dusp22b (ENSCHAG00000008514)	irf4a (ENSCHAG00000008525)	foxq1a (ENSCHAG00000008564)	foxf2a (ENSCHAG00000008585)	foxc1a (ENSCHAG00000008601)
Denticle herring	MODERN SPECIES	14	ENSDCDG00000026827	C8A (ENSDCDG00000026826)	c8b (ENSDCDG00000026817)	dab1b (ENSDCDG00000026787)	rpe65a (ENSDCDG00000026226)	TMEM107 (ENSDCDG00000026220)	aurkb (ENSDCDG00000026219)	aurkb (ENSDCDG00000026218)	RNF11 (ENSDCDG00000026217)	ENSDCDG00000026215	ENSDCDG00000026214	ENSDCDG00000026202	ssx2ipa (ENSDCDG00000026191)	tubb2 (ENSDCDG00000026185)	slc22a23 (ENSDCDG00000026183)	DSP (ENSDCDG00000024080) #22	TNS3 (ENSDCDG00000022743)	IGFBP3 (ENSDCDG00000022153)	igfbp1b (ENSDCDG00000021949)	adcy1b (ENSDCDG00000021929)	SIRT5 (ENSDCDG00000021918)	tll1 (ENSDCDG00000020595)	cpe (ENSDCDG00000020360)	msmo1 (ENSDCDG00000020357)	KLHL2 (ENSDCDG00000020354)	tma16 (ENSDCDG00000020350)	ENSDCDG00000020348	ENSDCDG00000020347	apela (ENSDCDG00000020345)	tmem192 (ENSDCDG00000020342)	npy1r (ENSDCDG00000020318)
Euteleosteomorpha	ANCESTRAL SPECIES	10	ENSGT00950000182917.b.a.a	ENSGT00990000204641.a	ENSGT00970000194032	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Acanthomorphata	ANCESTRAL SPECIES		ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b	ENSGT00940000156211.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b	ENSGT00940000156211.a.b
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b	ENSGT00940000156211.a.b
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Carangaria	ANCESTRAL SPECIES	5	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Turbot	MODERN SPECIES	19	vps4b (ENSSMAG00000020443)	LAMA3 (ENSSMAG00000020427)	TTC39C (ENSSMAG00000020421)	OSBPL1A (ENSSMAG00000020415)	ENSSMAG00000020412	ZNF521 (ENSSMAG00000020393)	SS18 (ENSSMAG00000020375)	PSMA8 (ENSSMAG00000020374)	KCTD1 (ENSSMAG00000020364)	AQP4 (ENSSMAG00000020351)	CDH2 (ENSSMAG00000020336)	DSC1 (ENSSMAG00000020331)	ENSSMAG00000020322	tubb2 (ENSSMAG00000020319)	ENSSMAG00000020314	ENSSMAG00000020294 #22	TNS3 (ENSSMAG00000020276)	IGFBP3 (ENSSMAG00000020265)	IGFBP1 (ENSSMAG00000020271)	adcy1b (ENSSMAG00000020231)	ENSSMAG00000020222	ENSSMAG00000020205	ENSSMAG00000020187	ENSSMAG00000020172	ENSSMAG00000020169	ripk1l (ENSSMAG00000020150)	dusp22b (ENSSMAG00000020141)	irf4a (ENSSMAG00000020109)	foxq1a (ENSSMAG00000020104)	foxf2a (ENSSMAG00000020102)	foxc1a (ENSSMAG00000017911)
Tongue sole	MODERN SPECIES	12	rpe65a (ENSCSEG00000010662)	CACNA1E (ENSCSEG00000010561)	ENSCSEG00000010554	KLHL14 (ENSCSEG00000010537)	ENSCSEG00000010507	dtna (ENSCSEG00000010470)	mapre2 (ENSCSEG00000010441)	cebpd (ENSCSEG00000010409)	ENSCSEG00000010390	mcm4 (ENSCSEG00000010327)	ube2v2 (ENSCSEG00000010314)	snai2 (ENSCSEG00000010311)	SNTG1 (ENSCSEG00000010282)	ENSCSEG00000010255	ENSCSEG00000010237	DSP (ENSCSEG00000010216) #22	TNS3 (ENSCSEG00000010201)	IGFBP3 (ENSCSEG00000010197)	IGFBP1 (ENSCSEG00000010195)	adcy1b (ENSCSEG00000010136)	SIRT5 (ENSCSEG00000010122)	PHACTR1 (ENSCSEG00000010111)	ENSCSEG00000010090	PHLPP1 (ENSCSEG00000010072)	MEP1B (ENSCSEG00000009958)	opn7a (ENSCSEG00000009941)	ripk1l (ENSCSEG00000009905)	dusp22b (ENSCSEG00000009896)	irf4a (ENSCSEG00000009886)	foxq1a (ENSCSEG00000009875)	foxf2a (ENSCSEG00000009870)
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Seriola	ANCESTRAL SPECIES		ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000167019	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000180519	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b
Greater amberjack	MODERN SPECIES	99						ZNF521 (ENSSDUG00000020931)	ss18 (ENSSDUG00000020873)	psma8 (ENSSDUG00000020844)	KCTD1 (ENSSDUG00000020834)	AQP4 (ENSSDUG00000020808)	CDH2 (ENSSDUG00000020770)	dsc2l (ENSSDUG00000020748)	ENSSDUG00000020725	tubb2 (ENSSDUG00000020682)	slc22a23 (ENSSDUG00000020659)	DSP (ENSSDUG00000020531) #22	TNS3 (ENSSDUG00000020485)	IGFBP3 (ENSSDUG00000020472)	IGFBP1 (ENSSDUG00000020363)	ENSSDUG00000020347	adcy1b (ENSSDUG00000020308)	SIRT5 (ENSSDUG00000020289)	ENSSDUG00000020274	PHACTR1 (ENSSDUG00000020251)	PHLPP1 (ENSSDUG00000020186)	MEP1B (ENSSDUG00000020161)	opn7a (ENSSDUG00000020100)	ripk1l (ENSSDUG00000020067)	dusp22b (ENSSDUG00000020054)	irf4a (ENSSDUG00000020038)	foxq1a (ENSSDUG00000020033)
Yellowtail amberjack	MODERN SPECIES	3151	ENSSLDG00000019140	TTC39C (ENSSLDG00000019116)	OSBPL1A (ENSSLDG00000019088)	ENSSLDG00000019071	ENSSLDG00000019063	ZNF521 (ENSSLDG00000019016)	ss18 (ENSSLDG00000018962)	psma8 (ENSSLDG00000018934)	KCTD1 (ENSSLDG00000018914)	AQP4 (ENSSLDG00000018897)	CDH2 (ENSSLDG00000018869)	dsc2l (ENSSLDG00000018841)	ENSSLDG00000018816	tubb2 (ENSSLDG00000018797)	SLC22A23 (ENSSLDG00000018764)	DSP (ENSSLDG00000018724) #22	TNS3 (ENSSLDG00000018690)	IGFBP3 (ENSSLDG00000018666)	igfbp1b (ENSSLDG00000018680)	ENSSLDG00000018655	adcy1b (ENSSLDG00000018607)	SIRT5 (ENSSLDG00000018587)	ENSSLDG00000018570	ENSSLDG00000018564	ENSSLDG00000018549	ENSSLDG00000018532	PHLPP1 (ENSSLDG00000018484)	MEP1B (ENSSLDG00000018458)	opn7a (ENSSLDG00000018385)	ripk1l (ENSSLDG00000018353)	dusp22b (ENSSLDG00000018342)
Barramundi perch	MODERN SPECIES	69	vps4b (ENSLCAG00010010804)	LAMA3 (ENSLCAG00010010572)	TTC39C (ENSLCAG00010010512)	OSBPL1A (ENSLCAG00010010485)	ENSLCAG00010010479	ZNF521 (ENSLCAG00010010472)	ss18 (ENSLCAG00010010463)	psma8 (ENSLCAG00010010442)	KCTD1 (ENSLCAG00010010437)	AQP4 (ENSLCAG00010010432)	CDH2 (ENSLCAG00010010423)	dsc2l (ENSLCAG00010010416)	ENSLCAG00010010407	tubb2 (ENSLCAG00010010387)	SLC22A23 (ENSLCAG00010010384)	DSP (ENSLCAG00010010041) #22	TNS3 (ENSLCAG00010009939)	IGFBP3 (ENSLCAG00010009929)	igfbp1b (ENSLCAG00010009927)	adcy1b (ENSLCAG00010009831)	ENSLCAG00010009802	ENSLCAG00010009797	PHACTR1 (ENSLCAG00010009788)	PHLPP1 (ENSLCAG00010009705)	MEP1B (ENSLCAG00010009658)	opn7a (ENSLCAG00010009644)	ripk1l (ENSLCAG00010009640)	dusp22b (ENSLCAG00010009634)	irf4a (ENSLCAG00010009618)	foxq1a (ENSLCAG00010009610)	foxf2a (ENSLCAG00010009606)
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Climbing perch	MODERN SPECIES	8	ENSATEG00000026843	ENSATEG00000010100	ENSATEG00000026507	ENSATEG00000027987	ENSATEG00000027816	ZNF521 (ENSATEG00000009781)	SS18 (ENSATEG00000009718)	PSMA8 (ENSATEG00000009669)	KCTD1 (ENSATEG00000009640)	AQP4 (ENSATEG00000009503)	CDH2 (ENSATEG00000009412)	DSC1 (ENSATEG00000009379)	ENSATEG00000009363	tubb2 (ENSATEG00000023934)	ENSATEG00000026617	ENSATEG00000009310 #22	TNS3 (ENSATEG00000009291)	IGFBP3 (ENSATEG00000009283)	igfbp1b (ENSATEG00000008951)	adcy1b (ENSATEG00000008822)	ENSATEG00000008773	ENSATEG00000008715	ENSATEG00000008694	ENSATEG00000008553	ENSATEG00000008461	ripk1l (ENSATEG00000008438)	dusp22b (ENSATEG00000008418)	irf4a (ENSATEG00000008375)	foxq1a (ENSATEG00000008360)	foxf2a (ENSATEG00000008353)	foxc1a (ENSATEG00000008335)
Siamese fighting fish	MODERN SPECIES	8	kdsr (ENSBSLG00000024806)	vps4b (ENSBSLG00000024890)	TTC39C (ENSBSLG00000025425)	ENSBSLG00000025587	ENSBSLG00000025604	ZNF521 (ENSBSLG00000025611)	ss18 (ENSBSLG00000025636)	psma8 (ENSBSLG00000025729)	KCTD1 (ENSBSLG00000025755)	ENSBSLG00000025762	CDH2 (ENSBSLG00000025824)	dsc2l (ENSBSLG00000025886)	ENSBSLG00000025887	tubb2 (ENSBSLG00000025961)	slc22a23 (ENSBSLG00000025972)	DSP (ENSBSLG00000026042) #22	TNS3 (ENSBSLG00000026183)	IGFBP3 (ENSBSLG00000026225)	igfbp1b (ENSBSLG00000026250)	adcy1b (ENSBSLG00000005015)	SIRT5 (ENSBSLG00000005825)	PHACTR1 (ENSBSLG00000005845)	PHLPP1 (ENSBSLG00000005913)	MEP1B (ENSBSLG00000005999)	opn7a (ENSBSLG00000006333)	ripk1l (ENSBSLG00000006395)	dusp22b (ENSBSLG00000006429)	irf4a (ENSBSLG00000006486)	foxq1a (ENSBSLG00000006577)	foxf2a (ENSBSLG00000006601)	foxc1a (ENSBSLG00000006611)
Zig-zag eel	MODERN SPECIES	8	vps4b (ENSMAMG00000013215)	LAMA3 (ENSMAMG00000013323)	TTC39C (ENSMAMG00000013441)	OSBPL1A (ENSMAMG00000013505)	ENSMAMG00000013614	ZNF521 (ENSMAMG00000013641)	SS18 (ENSMAMG00000013697)	PSMA8 (ENSMAMG00000013734)	KCTD1 (ENSMAMG00000013768)	AQP4 (ENSMAMG00000013796)	CDH2 (ENSMAMG00000013818)	DSC1 (ENSMAMG00000013873)	ENSMAMG00000013907	tubb2 (ENSMAMG00000026660)	ENSMAMG00000014036	ENSMAMG00000014080 #22	TNS3 (ENSMAMG00000014107)	IGFBP3 (ENSMAMG00000014131)	igfbp1b (ENSMAMG00000014172)	ENSMAMG00000014185	adcy1b (ENSMAMG00000014197)	ENSMAMG00000014247	ENSMAMG00000014289	ENSMAMG00000014322	ENSMAMG00000014416	ripk1l (ENSMAMG00000014429)	dusp22b (ENSMAMG00000014461)	irf4a (ENSMAMG00000014470)	foxq1a (ENSMAMG00000014500)	foxf2a (ENSMAMG00000014518)	foxc1a (ENSMAMG00000014532)
Eupercaria	ANCESTRAL SPECIES	24	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Tetraodontidae	ANCESTRAL SPECIES	30	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Tetraodon	MODERN SPECIES	6	ENSTNIG00000015208	aldoaa (ENSTNIG00000015207)	vkorc1 (ENSTNIG00000006213)	ENSTNIG00000015206	mep1ba (ENSTNIG00000015205)	ENSTNIG00000015204	ENSTNIG00000001073	vkorc1 (ENSTNIG00000015203)	mapk7 (ENSTNIG00000015202)	zgc:92313 (ENSTNIG00000015201)	ENSTNIG00000015200	ENSTNIG00000015199	ENSTNIG00000015198	tubb2 (ENSTNIG00000015197)	slc22a23 (ENSTNIG00000015196)	DSP (ENSTNIG00000015195) #22	ENSTNIG00000015194	trpm4b.2 (ENSTNIG00000015193)	ENSTNIG00000015192	irf3 (ENSTNIG00000015191)	PRR12 (ENSTNIG00000015190)	ENSTNIG00000015189	ENSTNIG00000015188	TNNT1 (ENSTNIG00000015187)	dnaaf3 (ENSTNIG00000015186)	syt5b (ENSTNIG00000001694)	ENSTNIG00000005875	ENSTNIG00000005874	ENSTNIG00000005873
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Ballan wrasse	MODERN SPECIES	4	ENSLBEG00000018733	TTC39C (ENSLBEG00000018652)	OSBPL1A (ENSLBEG00000018612)	ENSLBEG00000018573	ENSLBEG00000018555	ZNF521 (ENSLBEG00000018510)	ss18 (ENSLBEG00000018416)	psma8 (ENSLBEG00000018353)	KCTD1 (ENSLBEG00000018323)	AQP4 (ENSLBEG00000018294)	CDH2 (ENSLBEG00000018251)	dsc2l (ENSLBEG00000018158)	ENSLBEG00000018058	tubb2 (ENSLBEG00000018010)	slc22a23 (ENSLBEG00000017989)	DSP (ENSLBEG00000017750) #22	TNS3 (ENSLBEG00000017592)	IGFBP3 (ENSLBEG00000017562)	igfbp1b (ENSLBEG00000017546)	adcy1b (ENSLBEG00000017481)	SIRT5 (ENSLBEG00000017445)	ENSLBEG00000017424	ENSLBEG00000017407	ENSLBEG00000017385	ENSLBEG00000017362	PHACTR1 (ENSLBEG00000017318)	PHLPP1 (ENSLBEG00000017227)	MEP1B (ENSLBEG00000017151)	opn7a (ENSLBEG00000017091)	ripk1l (ENSLBEG00000017019)	dusp22b (ENSLBEG00000016986)
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Gilthead seabream	MODERN SPECIES	13	LAMA3 (ENSSAUG00010026450)	TTC39C (ENSSAUG00010026433)	OSBPL1A (ENSSAUG00010025769)	ENSSAUG00010025750	ZNF521 (ENSSAUG00010025747)	ENSSAUG00010025744	ss18 (ENSSAUG00010025742)	psma8 (ENSSAUG00010025737)	KCTD1 (ENSSAUG00010025732)	AQP4 (ENSSAUG00010025731)	CDH2 (ENSSAUG00010023834)	dsc2l (ENSSAUG00010023817)	ENSSAUG00010023815	tubb2 (ENSSAUG00010023813)	SLC22A23 (ENSSAUG00010023798)	DSP (ENSSAUG00010023788) #22	TNS3 (ENSSAUG00010023453)	IGFBP3 (ENSSAUG00010023443)	ENSSAUG00010023442	IGFBP1 (ENSSAUG00010023441)	adcy1b (ENSSAUG00010023411)	SIRT5 (ENSSAUG00010023410)	ENSSAUG00010023409	ENSSAUG00010023408	ENSSAUG00010023396	PHLPP1 (ENSSAUG00010023394)	MEP1B (ENSSAUG00010023365)	opn7a (ENSSAUG00010023361)	ripk1l (ENSSAUG00010023359)	dusp22b (ENSSAUG00010023358)	irf4a (ENSSAUG00010023357)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
European seabass	MODERN SPECIES		vps4b (ENSDLAG00005009823)	LAMA3 (ENSDLAG00005010185)	TTC39C (ENSDLAG00005012161)	OSBPL1A (ENSDLAG00005012507)	ENSDLAG00005015974	ZNF521 (ENSDLAG00005016043)	SS18 (ENSDLAG00005016072)	PSMA8 (ENSDLAG00005017693)	KCTD1 (ENSDLAG00005016121)	AQP4 (ENSDLAG00005016143)	CDH2 (ENSDLAG00005016326)	DSC1 (ENSDLAG00005020295)	ENSDLAG00005020314	tubb2 (ENSDLAG00005020323)	ENSDLAG00005020341	ENSDLAG00005020378 #22	TNS3 (ENSDLAG00005021110)	IGFBP3 (ENSDLAG00005021201)	IGFBP1 (ENSDLAG00005021204)	ADCY1 (ENSDLAG00005021214)	ENSDLAG00005021506	ENSDLAG00005021514	ENSDLAG00005021571	ENSDLAG00005021592	ENSDLAG00005021947	ENSDLAG00005021964	ripk1l (ENSDLAG00005021971)	dusp22b (ENSDLAG00005021976)	irf4a (ENSDLAG00005021983)	foxq1a (ENSDLAG00005021992)	foxf2a (ENSDLAG00005021995)
Large yellow croaker	MODERN SPECIES	1	TTC39C (ENSLCRG00005019961)	OSBPL1A (ENSLCRG00005019637)	ENSLCRG00005019622	ZNF521 (ENSLCRG00005019617)	ENSLCRG00005019616	ss18 (ENSLCRG00005019572)	psma8 (ENSLCRG00005019556)	ENSLCRG00005019555	AQP4 (ENSLCRG00005019553)	CDH2 (ENSLCRG00005017109)	ENSLCRG00005017091	dsc2l (ENSLCRG00005017086)	ENSLCRG00005017081	tubb2 (ENSLCRG00005017073)	SLC22A23 (ENSLCRG00005017072)	DSP (ENSLCRG00005016560) #22	TNS3 (ENSLCRG00005016488)	IGFBP3 (ENSLCRG00005016479)	IGFBP1 (ENSLCRG00005016477)	adcy1b (ENSLCRG00005016410)	SIRT5 (ENSLCRG00005016402)	ENSLCRG00005016401	PHACTR1 (ENSLCRG00005016360)	PHLPP1 (ENSLCRG00005015982)	MEP1B (ENSLCRG00005015978)	opn7a (ENSLCRG00005015977)	ripk1l (ENSLCRG00005015975)	dusp22b (ENSLCRG00005015974)	irf4a (ENSLCRG00005015973)	foxq1a (ENSLCRG00005015972)	foxf2a (ENSLCRG00005015970)
Perciformes	ANCESTRAL SPECIES	5	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Perciformes_a	ANCESTRAL SPECIES	17	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Pike perch	MODERN SPECIES	12	vps4b (ENSSLUG00000017490)	LAMA3 (ENSSLUG00000017309)	TTC39C (ENSSLUG00000017213)	OSBPL1A (ENSSLUG00000014272)	ENSSLUG00000014099	ZNF521 (ENSSLUG00000014084)	ss18 (ENSSLUG00000014054)	psma8 (ENSSLUG00000014022)	KCTD1 (ENSSLUG00000014003)	AQP4 (ENSSLUG00000013995)	CDH2 (ENSSLUG00000007866)	dsc2l (ENSSLUG00000007507)	ENSSLUG00000007478	tubb2 (ENSSLUG00000007414)	slc22a23 (ENSSLUG00000007392)	DSP (ENSSLUG00000005224) #22	TNS3 (ENSSLUG00000004891)	IGFBP3 (ENSSLUG00000004852)	igfbp1b (ENSSLUG00000004848)	adcy1b (ENSSLUG00000004140)	SIRT5 (ENSSLUG00000004063)	ENSSLUG00000004052	PHACTR1 (ENSSLUG00000004007)	PHLPP1 (ENSSLUG00000003968)	MEP1B (ENSSLUG00000003945)	opn7a (ENSSLUG00000003911)	ripk1l (ENSSLUG00000003896)	dusp22b (ENSSLUG00000003886)	irf4a (ENSSLUG00000003880)	foxq1a (ENSSLUG00000003873)	foxf2a (ENSSLUG00000003868)
Channel bull blenny	MODERN SPECIES	8	ENSCGOG00000001709	ENSCGOG00000023886	TTC39C (ENSCGOG00000023866)	OSBPL1A (ENSCGOG00000023855)	ENSCGOG00000023851	ZNF521 (ENSCGOG00000023847)	ss18 (ENSCGOG00000023838)	psma8 (ENSCGOG00000023801)	KCTD1 (ENSCGOG00000023795)	AQP4 (ENSCGOG00000023794)	CDH2 (ENSCGOG00000023360)	dsc2l (ENSCGOG00000023275)	ENSCGOG00000023261	tubb2 (ENSCGOG00000023246)	slc22a23 (ENSCGOG00000023243)	DSP (ENSCGOG00000023011) #22	TNS3 (ENSCGOG00000022788)	IGFBP3 (ENSCGOG00000022740)	IGFBP1 (ENSCGOG00000022730)	adcy1b (ENSCGOG00000022721)	SIRT5 (ENSCGOG00000022704)	ENSCGOG00000022702	PHACTR1 (ENSCGOG00000022699)	PHLPP1 (ENSCGOG00000022589)	MEP1B (ENSCGOG00000022584)	opn7a (ENSCGOG00000022580)	ripk1l (ENSCGOG00000022577)	dusp22b (ENSCGOG00000022575)	irf4a (ENSCGOG00000022552)	foxq1a (ENSCGOG00000022550)	foxf2a (ENSCGOG00000022549)
Cottioidei	ANCESTRAL SPECIES	15	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00390000008686.d.a	ENSGT00940000155526.i.b	ENSGT00940000175414	ENSGT00940000158961	ENSGT01100000263512.a.a.a.b.a.b.b
Lumpfish	MODERN SPECIES	8	ENSCLMG00005004034	TTC39C (ENSCLMG00005003532)	OSBPL1A (ENSCLMG00005003132)	ENSCLMG00005003107	ENSCLMG00005003106	ZNF521 (ENSCLMG00005003102)	ss18 (ENSCLMG00005003096)	psma8 (ENSCLMG00005002759)	KCTD1 (ENSCLMG00005002758)	AQP4 (ENSCLMG00005002757)	CDH2 (ENSCLMG00005002755)	dsc2l (ENSCLMG00005002754)	ENSCLMG00005002751	tubb2 (ENSCLMG00005002743)	SLC22A23 (ENSCLMG00005002742)	DSP (ENSCLMG00005002130) #22	TNS3 (ENSCLMG00005002024)	IGFBP3 (ENSCLMG00005001832)	igfbp1b (ENSCLMG00005001769)	adcy1b (ENSCLMG00005001762)	SIRT5 (ENSCLMG00005001754)	ENSCLMG00005001752	ENSCLMG00005001750	PHLPP1 (ENSCLMG00005001737)	MEP1B (ENSCLMG00005001681)	opn7a (ENSCLMG00005001594)	ripk1l (ENSCLMG00005001554)	GORASP2 (ENSCLMG00005001542)	GAD1 (ENSCLMG00005001502)	ENSCLMG00005001473	SLC25A30 (ENSCLMG00005001426)
Stickleback	MODERN SPECIES	2	vps4b (ENSGACG00000013317)	LAMA3 (ENSGACG00000013300)	TTC39C (ENSGACG00000013290)	OSBPL1A (ENSGACG00000013256)	ENSGACG00000013253	ZNF521 (ENSGACG00000013251)	ss18 (ENSGACG00000013236)	psma8 (ENSGACG00000013222)	KCTD1 (ENSGACG00000013193)	AQP4 (ENSGACG00000013183)	CDH2 (ENSGACG00000013168)	dsc2l (ENSGACG00000013163)	ENSGACG00000013161	tubb2 (ENSGACG00000013114)	slc22a23 (ENSGACG00000013105)	DSP (ENSGACG00000013099) #22	TNS3 (ENSGACG00000013093)	IGFBP3 (ENSGACG00000013090)	igfbp1b (ENSGACG00000013082)	adcy1b (ENSGACG00000013069)	SIRT5 (ENSGACG00000013024)	PHACTR1 (ENSGACG00000013017)	PHLPP1 (ENSGACG00000013009)	MEP1B (ENSGACG00000012999)	opn7a (ENSGACG00000012996)	ripk1l (ENSGACG00000012991)	gorasp2 (ENSGACG00000012972)	gad1b (ENSGACG00000012944)	SLC25A30 (ENSGACG00000012919)	EDNRB (ENSGACG00000012901)	ENSGACG00000012897
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Aplocheiloidei	ANCESTRAL SPECIES	11	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b	ENSGT00940000156211.a.b
Mangrove rivulus	DUPLICATION
Mangrove rivulus	MODERN SPECIES	65	ENSKMAG00000013192	ENSKMAG00000013242	TTC39C (ENSKMAG00000013303)	OSBPL1A (ENSKMAG00000013357)	ENSKMAG00000013538	ZNF521 (ENSKMAG00000013661)	ss18 (ENSKMAG00000013752)	psma8 (ENSKMAG00000013841)	KCTD1 (ENSKMAG00000013894)	AQP4 (ENSKMAG00000013938)	CDH2 (ENSKMAG00000013992)	DSC1 (ENSKMAG00000014058)	ENSKMAG00000014082	ENSKMAG00000014113	SLC22A23 (ENSKMAG00000014165)	DSP (ENSKMAG00000014265) #22	DSP (ENSKMAG00000014314) #22	TNS3 (ENSKMAG00000014376)	IGFBP3 (ENSKMAG00000014481)	IGFBP1 (ENSKMAG00000014503)	adcy1b (ENSKMAG00000014589)	SIRT5 (ENSKMAG00000014681)	PHACTR1 (ENSKMAG00000014734)	ENSKMAG00000014817	PHLPP1 (ENSKMAG00000014856)	MEP1B (ENSKMAG00000014925)	opn7a (ENSKMAG00000014956)	ripk1l (ENSKMAG00000014984)	irf4a (ENSKMAG00000015009)	foxq1a (ENSKMAG00000015026)	foxf2a (ENSKMAG00000015033)
Mangrove rivulus	MODERN SPECIES	65	ENSKMAG00000013242	TTC39C (ENSKMAG00000013303)	OSBPL1A (ENSKMAG00000013357)	ENSKMAG00000013538	ZNF521 (ENSKMAG00000013661)	ss18 (ENSKMAG00000013752)	psma8 (ENSKMAG00000013841)	KCTD1 (ENSKMAG00000013894)	AQP4 (ENSKMAG00000013938)	CDH2 (ENSKMAG00000013992)	DSC1 (ENSKMAG00000014058)	ENSKMAG00000014082	ENSKMAG00000014113	SLC22A23 (ENSKMAG00000014165)	DSP (ENSKMAG00000014265) #22	DSP (ENSKMAG00000014314) #22	TNS3 (ENSKMAG00000014376)	IGFBP3 (ENSKMAG00000014481)	IGFBP1 (ENSKMAG00000014503)	adcy1b (ENSKMAG00000014589)	SIRT5 (ENSKMAG00000014681)	PHACTR1 (ENSKMAG00000014734)	ENSKMAG00000014817	PHLPP1 (ENSKMAG00000014856)	MEP1B (ENSKMAG00000014925)	opn7a (ENSKMAG00000014956)	ripk1l (ENSKMAG00000014984)	irf4a (ENSKMAG00000015009)	foxq1a (ENSKMAG00000015026)	foxf2a (ENSKMAG00000015033)	foxc1a (ENSKMAG00000015040)
Turquoise killifish	MODERN SPECIES	1618	ENSNFUG00015006806	TTC39C (ENSNFUG00015006774)	OSBPL1A (ENSNFUG00015006692)	CABZ01084564.1 (ENSNFUG00015006686)	ZNF521 (ENSNFUG00015006661)	ENSNFUG00015006650	SS18 (ENSNFUG00015006618)	psma8 (ENSNFUG00015006600)	KCTD15B (ENSNFUG00015006591)	AQP4 (ENSNFUG00015006581)	CDH2 (ENSNFUG00015006188)	DSC2L (ENSNFUG00015006058)	ENSNFUG00015006033	tubb2 (ENSNFUG00015006023)	SLC22A23 (ENSNFUG00015006019)	DSP (ENSNFUG00015004891) #22	TNS3 (ENSNFUG00015023268)	ENSNFUG00015023253	igfbp3 (ENSNFUG00015023248)	igfbp1 (ENSNFUG00015023235)	adcy1b (ENSNFUG00015023171)	ENSNFUG00015023158	PHACTR1 (ENSNFUG00015023123)	PHLPP1 (ENSNFUG00015023102)	MEP1B (ENSNFUG00015023097)	opn7a (ENSNFUG00015023088)	ripk1l (ENSNFUG00015023069)	ENSNFUG00015023066	ENSNFUG00015023065	irf4a (ENSNFUG00015023063)	foxq1a (ENSNFUG00015023060)
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
NAME_4	ANCESTRAL SPECIES	19	ENSGT00940000154973.a.a	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Sheepshead minnow	MODERN SPECIES	491											CDH2 (ENSCVAG00000022187)	DSC1 (ENSCVAG00000022149)	ENSCVAG00000022078	tubb2 (ENSCVAG00000022054)	SLC22A23 (ENSCVAG00000022046)	DSP (ENSCVAG00000022035) #22	ENSCVAG00000022017	IGFBP3 (ENSCVAG00000021975)	IGFBP1 (ENSCVAG00000021968)	adcy1b (ENSCVAG00000021962)	SIRT5 (ENSCVAG00000021916)	PHACTR1 (ENSCVAG00000021901)	PHLPP1 (ENSCVAG00000021844)	MEP1B (ENSCVAG00000021821)
Mummichog	MODERN SPECIES	314	ENSFHEG00000016163	TTC39C (ENSFHEG00000016060)	OSBPL1A (ENSFHEG00000015997)	ENSFHEG00000015836	ZNF521 (ENSFHEG00000000599)	ss18 (ENSFHEG00000015714)	psma8 (ENSFHEG00000015704)	KCTD1 (ENSFHEG00000015661)	AQP4 (ENSFHEG00000015640)	CDH2 (ENSFHEG00000015625)	DSC1 (ENSFHEG00000015569)	ENSFHEG00000015515	ENSFHEG00000015495	ENSFHEG00000015474	slc22a23 (ENSFHEG00000015460)	DSP (ENSFHEG00000015442) #22	TNS3 (ENSFHEG00000015421)	IGFBP3 (ENSFHEG00000015298)	igfbp1b (ENSFHEG00000015291)	adcy1b (ENSFHEG00000015271)	SIRT5 (ENSFHEG00000015217)	ENSFHEG00000015206	ENSFHEG00000015196	PHLPP1 (ENSFHEG00000015164)	MEP1B (ENSFHEG00000015055)	ENSFHEG00000014906	opn7a (ENSFHEG00000014883)	ripk1l (ENSFHEG00000014819)	dusp22b (ENSFHEG00000014798)	irf4a (ENSFHEG00000014786)	foxq1a (ENSFHEG00000014747)
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Poecilia	ANCESTRAL SPECIES	16	ENSGT00940000175716	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
NAME_6	ANCESTRAL SPECIES	11	ENSGT00940000175716	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Amazon molly	MODERN SPECIES	355	vps4b (ENSPFOG00000004886)	LAMA3 (ENSPFOG00000003277)	TTC39C (ENSPFOG00000003056)	OSBPL1A (ENSPFOG00000002704)	ENSPFOG00000002644	ZNF521 (ENSPFOG00000002544)	ss18 (ENSPFOG00000002394)	psma8 (ENSPFOG00000002326)	KCTD1 (ENSPFOG00000002282)	AQP4 (ENSPFOG00000002247)	CDH2 (ENSPFOG00000001883)	DSC1 (ENSPFOG00000001588)	ENSPFOG00000001104	tubb2 (ENSPFOG00000000911)	slc22a23 (ENSPFOG00000000854)	DSP (ENSPFOG00000000696) #22	TNS3 (ENSPFOG00000000477)	IGFBP3 (ENSPFOG00000000425)	igfbp1b (ENSPFOG00000000389)	adcy1b (ENSPFOG00000000275)	SIRT5 (ENSPFOG00000000225)	PHACTR1 (ENSPFOG00000000187)	PHLPP1 (ENSPFOG00000000119)
Sailfin molly	MODERN SPECIES	1007												dsc2l (ENSPLAG00000018853)	ENSPLAG00000018892	tubb2 (ENSPLAG00000000569)	slc22a23 (ENSPLAG00000018946)	DSP (ENSPLAG00000019042) #22	ENSPLAG00000019090
Guppy	MODERN SPECIES	447	vps4b (ENSPREG00000004314)	ENSPREG00000004352	TTC39C (ENSPREG00000004391)	OSBPL1A (ENSPREG00000004467)	ENSPREG00000004535	ENSPREG00000004550	ss18 (ENSPREG00000004572)	psma8 (ENSPREG00000004611)	KCTD1 (ENSPREG00000004636)	AQP4 (ENSPREG00000004681)	CDH2 (ENSPREG00000004831)	dsc2l (ENSPREG00000004908)	ENSPREG00000005081	tubb2 (ENSPREG00000005152)	SLC22A23 (ENSPREG00000005290)	DSP (ENSPREG00000005396) #22	TNS3 (ENSPREG00000005624)	IGFBP3 (ENSPREG00000005716)	igfbp1b (ENSPREG00000005763)	adcy1b (ENSPREG00000005997)	SIRT5 (ENSPREG00000006045)	PHACTR1 (ENSPREG00000006064)	PHLPP1 (ENSPREG00000006112)	MEP1B (ENSPREG00000006193)	opn7a (ENSPREG00000006325)	ENSPREG00000006382	IRF4 (ENSPREG00000006448)	rock1 (ENSPREG00000006471)	ENSPREG00000006569	usp14 (ENSPREG00000006605)	thoc1 (ENSPREG00000006719)
Platyfish	MODERN SPECIES	20	ENSXMAG00000022508	ENSXMAG00000021209	TTC39C (ENSXMAG00000012148)	OSBPL1A (ENSXMAG00000012174)	ENSXMAG00000023966	ZNF521 (ENSXMAG00000016577)	ss18 (ENSXMAG00000016590)	psma8 (ENSXMAG00000016624)	KCTD1 (ENSXMAG00000016653)	AQP4 (ENSXMAG00000016658)	CDH2 (ENSXMAG00000016663)	dsc2l (ENSXMAG00000016712)	ENSXMAG00000016745	tubb2 (ENSXMAG00000016789)	slc22a23 (ENSXMAG00000027849)	DSP (ENSXMAG00000016816) #22	TNS3 (ENSXMAG00000016847)	IGFBP3 (ENSXMAG00000028732)	igfbp1b (ENSXMAG00000016888)	adcy1b (ENSXMAG00000016898)	SIRT5 (ENSXMAG00000016935)	PHACTR1 (ENSXMAG00000016948)	PHLPP1 (ENSXMAG00000016960)	MEP1B (ENSXMAG00000016976)	opn7a (ENSXMAG00000016993)	ripk1l (ENSXMAG00000016997)	dusp22b (ENSXMAG00000023204)	irf4a (ENSXMAG00000017015)	foxq1a (ENSXMAG00000021726)	foxf2a (ENSXMAG00000017028)	foxc1a (ENSXMAG00000024377)
Oryzias	ANCESTRAL SPECIES	12	ENSGT00940000175716	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT00940000175716	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Indian medaka	MODERN SPECIES	10	ENSOMEG00000003956	TTC39C (ENSOMEG00000003999)	ENSOMEG00000004018	ENSOMEG00000004034	ENSOMEG00000004040	ZNF521 (ENSOMEG00000004084)	ss18 (ENSOMEG00000004158)	psma8 (ENSOMEG00000004187)	KCTD1 (ENSOMEG00000004223)	AQP4 (ENSOMEG00000001022)	CDH2 (ENSOMEG00000004301)	dsc2l (ENSOMEG00000004331)	ENSOMEG00000004342	tubb2 (ENSOMEG00000004353)	SLC22A23 (ENSOMEG00000004421)	DSP (ENSOMEG00000004499) #22	TNS3 (ENSOMEG00000004596)	IGFBP3 (ENSOMEG00000004654)	IGFBP1 (ENSOMEG00000004680)	adcy1b (ENSOMEG00000004767)	ENSOMEG00000004894	SIRT5 (ENSOMEG00000004922)	PHACTR1 (ENSOMEG00000004987)	PHLPP1 (ENSOMEG00000005099)	MEP1B (ENSOMEG00000005145)	opn7a (ENSOMEG00000005163)	ripk1l (ENSOMEG00000005184)	dusp22b (ENSOMEG00000005206)	irf4a (ENSOMEG00000005225)	foxq1a (ENSOMEG00000000668)	foxf2a (ENSOMEG00000005240)
Javanese ricefish	MODERN SPECIES	8	kdsr (ENSOJAG00000023342)	vps4b (ENSOJAG00000023380)	TTC39C (ENSOJAG00000009476)	OSBPL1A (ENSOJAG00000009598)	ENSOJAG00000009881	ZNF521 (ENSOJAG00000009908)	ss18 (ENSOJAG00000010056)	psma8 (ENSOJAG00000010085)	KCTD1 (ENSOJAG00000010204)	AQP4 (ENSOJAG00000010251)	CDH2 (ENSOJAG00000010488)	dsc2l (ENSOJAG00000012505)	ENSOJAG00000012569	tubb2 (ENSOJAG00000012588)	slc22a23 (ENSOJAG00000012659)	DSP (ENSOJAG00000012694) #22	TNS3 (ENSOJAG00000013443)	IGFBP3 (ENSOJAG00000013874)	igfbp1b (ENSOJAG00000013905)	adcy1b (ENSOJAG00000013940)	SIRT5 (ENSOJAG00000014078)	PHACTR1 (ENSOJAG00000014099)	PHLPP1 (ENSOJAG00000014165)	MEP1B (ENSOJAG00000014338)	ENSOJAG00000014354	ripk1l (ENSOJAG00000014388)	dusp22b (ENSOJAG00000014404)	irf4a (ENSOJAG00000014411)	foxq1a (ENSOJAG00000014436)	foxf2a (ENSOJAG00000014442)	foxc1a (ENSOJAG00000014446)
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.b	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Japanese Medaka HdrR	MODERN SPECIES	8	ENSORLG00000025340	TTC39C (ENSORLG00000016907)	OSBPL1A (ENSORLG00000016922)	ENSORLG00000022929	ENSORLG00000016939	ZNF521 (ENSORLG00000016949)	ss18 (ENSORLG00000016977)	psma8 (ENSORLG00000027101)	KCTD1 (ENSORLG00000016995)	AQP4 (ENSORLG00000017012)	cdh2 (ENSORLG00000017084)	dsc2l (ENSORLG00000017106)	ENSORLG00000017110	tubb2 (ENSORLG00000017113)	ENSORLG00000017117	DSP (ENSORLG00000017125) #22	TNS3 (ENSORLG00000017139)	IGFBP3 (ENSORLG00000017149)	igfbp1b (ENSORLG00000017161)	adcy1b (ENSORLG00000017169)	ENSORLG00000017188	ENSORLG00000017195	PHLPP1 (ENSORLG00000017203)	MEP1B (ENSORLG00000017217)	ENSORLG00000017226	ripk1l (ENSORLG00000017231)	dusp22b (ENSORLG00000030334)	irf4a (ENSORLG00000017242)	foxq1a (ENSORLG00000022023)	foxf2a (ENSORLG00000017250)	foxc1a (ENSORLG00000028410)
Chinese medaka	MODERN SPECIES	741	kdsr (ENSOSIG00000020808)	vps4b (ENSOSIG00000020510)	ENSOSIG00000020478	OSBPL1A (ENSOSIG00000020452)	ENSOSIG00000020441	ZNF521 (ENSOSIG00000020440)	psma8 (ENSOSIG00000020419)	ss18 (ENSOSIG00000020412)	ENSOSIG00000020397	AQP4 (ENSOSIG00000020392)	CDH2 (ENSOSIG00000016358)	dsc2l (ENSOSIG00000016201)	ENSOSIG00000016194	tubb2 (ENSOSIG00000016140)	SLC22A23 (ENSOSIG00000016137)	DSP (ENSOSIG00000015032) #22	TNS3 (ENSOSIG00000015005)	IGFBP3 (ENSOSIG00000015004)	igfbp1b (ENSOSIG00000015002)	adcy1b (ENSOSIG00000014625)	SIRT5 (ENSOSIG00000014616)	ENSOSIG00000014615	ENSOSIG00000014614	PHLPP1 (ENSOSIG00000014572)	MEP1B (ENSOSIG00000014553)	opn7a (ENSOSIG00000014546)	ripk1l (ENSOSIG00000014544)	dusp22b (ENSOSIG00000014539)	irf4a (ENSOSIG00000014532)	foxq1a (ENSOSIG00000014530)	foxf2a (ENSOSIG00000014528)
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000167019	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Burton s mouthbrooder	MODERN SPECIES	271	ENSHBUG00000004508	ENSHBUG00000004613	TTC39C (ENSHBUG00000004690)	OSBPL1A (ENSHBUG00000004747)	ENSHBUG00000004759	ZNF521 (ENSHBUG00000004805)	ss18 (ENSHBUG00000004841)	psma8 (ENSHBUG00000004895)	KCTD1 (ENSHBUG00000004918)	AQP4 (ENSHBUG00000004927)	CDH2 (ENSHBUG00000004968)	dsc2l (ENSHBUG00000005015)	ENSHBUG00000005033	tubb2 (ENSHBUG00000000132)	slc22a23 (ENSHBUG00000005374)	DSP (ENSHBUG00000005465) #22	ENSHBUG00000005521	IGFBP3 (ENSHBUG00000000729)	igfbp1b (ENSHBUG00000005525)	adcy1b (ENSHBUG00000005622)	SIRT5 (ENSHBUG00000005638)	PHACTR1 (ENSHBUG00000005703)	PHLPP1 (ENSHBUG00000005725)	MEP1B (ENSHBUG00000005743)	opn7a (ENSHBUG00000005826)	ripk1l (ENSHBUG00000005852)	dusp22b (ENSHBUG00000005862)	irf4a (ENSHBUG00000005913)	foxq1a (ENSHBUG00000000876)	foxf2a (ENSHBUG00000005935)	foxc1a (ENSHBUG00000005959)
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00940000154973.b	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
P. nyererei	MODERN SPECIES	299	ENSPNYG00000012468	ENSPNYG00000012519	TTC39C (ENSPNYG00000012599)	OSBPL1A (ENSPNYG00000012641)	ENSPNYG00000012926	ZNF521 (ENSPNYG00000012950)	ss18 (ENSPNYG00000012992)	psma8 (ENSPNYG00000013038)	KCTD1 (ENSPNYG00000013059)	AQP4 (ENSPNYG00000013097)	CDH2 (ENSPNYG00000013184)	dsc2l (ENSPNYG00000013238)	ENSPNYG00000013338	tubb2 (ENSPNYG00000013382)	SLC22A23 (ENSPNYG00000013540)	DSP (ENSPNYG00000013581) #22	TNS3 (ENSPNYG00000013611)	IGFBP3 (ENSPNYG00000013633)	igfbp1b (ENSPNYG00000013647)	adcy1b (ENSPNYG00000013673)	SIRT5 (ENSPNYG00000013717)	PHACTR1 (ENSPNYG00000013733)	PHLPP1 (ENSPNYG00000013774)	MEP1B (ENSPNYG00000013848)	opn7a (ENSPNYG00000013959)	ripk1l (ENSPNYG00000014044)	dusp22b (ENSPNYG00000014062)	irf4a (ENSPNYG00000014073)	foxq1a (ENSPNYG00000014087)	foxf2a (ENSPNYG00000014099)	foxc1a (ENSPNYG00000014110)
Haplochromini_B	ANCESTRAL SPECIES	12	ENSGT00940000155638.wb.a	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000167019	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a	ENSGT00940000162303.a.b
Eastern happy	MODERN SPECIES	9	ENSACLG00000022335	ENSACLG00000022281	TTC39C (ENSACLG00000022180)	OSBPL1A (ENSACLG00000022080)	ENSACLG00000022064	ZNF521 (ENSACLG00000022025)	ss18 (ENSACLG00000021934)	psma8 (ENSACLG00000021904)	KCTD1 (ENSACLG00000021856)	AQP4 (ENSACLG00000021796)	CDH2 (ENSACLG00000021735)	dsc2l (ENSACLG00000021646)	ENSACLG00000021621	tubb2 (ENSACLG00000021381)	slc22a23 (ENSACLG00000021330)	DSP (ENSACLG00000021205) #22	TNS3 (ENSACLG00000021153)	IGFBP3 (ENSACLG00000021124)	igfbp1b (ENSACLG00000021105)	adcy1b (ENSACLG00000020993)	SIRT5 (ENSACLG00000020953)	PHACTR1 (ENSACLG00000020914)	PHLPP1 (ENSACLG00000020816)	MEP1B (ENSACLG00000020775)	opn7a (ENSACLG00000020612)	ripk1l (ENSACLG00000020558)	dusp22b (ENSACLG00000020544)	irf4a (ENSACLG00000020537)	foxq1a (ENSACLG00000020510)	foxf2a (ENSACLG00000020502)	foxc1a (ENSACLG00000020494)
Zebra mbuna	MODERN SPECIES	1100	OSBPL1A (ENSMZEG00005025393)	ENSMZEG00005025389	ENSMZEG00005025385	ENSMZEG00005025384	ENSMZEG00005025383	ZNF521 (ENSMZEG00005025380)	ss18 (ENSMZEG00005025376)	psma8 (ENSMZEG00005025374)	KCTD1 (ENSMZEG00005025372)	AQP4 (ENSMZEG00005025370)	CDH2 (ENSMZEG00005025365)	dsc2l (ENSMZEG00005025360)	ENSMZEG00005025358	tubb2 (ENSMZEG00005025168)	slc22a23 (ENSMZEG00005025166)	DSP (ENSMZEG00005025162) #22	TNS3 (ENSMZEG00005025159)	IGFBP3 (ENSMZEG00005025157)	igfbp1b (ENSMZEG00005025156)	adcy1b (ENSMZEG00005025153)	SIRT5 (ENSMZEG00005025150)	PHACTR1 (ENSMZEG00005025149)	PHLPP1 (ENSMZEG00005025144)	MEP1B (ENSMZEG00005025139)	opn7a (ENSMZEG00005025126)	ripk1l (ENSMZEG00005025120)	dusp22b (ENSMZEG00005025117)	irf4a (ENSMZEG00005025111)	foxq1a (ENSMZEG00005025109)	foxf2a (ENSMZEG00005025108)	foxc1a (ENSMZEG00005025106)
Lyretail cichlid	MODERN SPECIES	300	ENSNBRG00000014217	ENSNBRG00000014153	TTC39C (ENSNBRG00000014109)	OSBPL1A (ENSNBRG00000013905)	ENSNBRG00000013868	ZNF521 (ENSNBRG00000013822)	ss18 (ENSNBRG00000013754)	psma8 (ENSNBRG00000013730)	KCTD1 (ENSNBRG00000013706)	AQP4 (ENSNBRG00000013687)	CDH2 (ENSNBRG00000013653)	dsc2l (ENSNBRG00000013611)	ENSNBRG00000013524	ENSNBRG00000013503	slc22a23 (ENSNBRG00000013476)	DSP (ENSNBRG00000013461) #22	TNS3 (ENSNBRG00000013410)	IGFBP3 (ENSNBRG00000013393)	igfbp1b (ENSNBRG00000013401)	adcy1b (ENSNBRG00000013359)	SIRT5 (ENSNBRG00000013327)	PHACTR1 (ENSNBRG00000013293)	PHLPP1 (ENSNBRG00000013249)	MEP1B (ENSNBRG00000013141)	opn7a (ENSNBRG00000013050)	ripk1l (ENSNBRG00000012956)	dusp22b (ENSNBRG00000012885)	irf4a (ENSNBRG00000012710)	foxq1a (ENSNBRG00000012688)	foxf2a (ENSNBRG00000012664)	foxc1a (ENSNBRG00000012654)
Nile tilapia	MODERN SPECIES	9	vps4b (ENSONIG00000009758)	LAMA3 (ENSONIG00000009751)	TTC39C (ENSONIG00000009745)	OSBPL1A (ENSONIG00000009743)	hrh3 (ENSONIG00000031115)	ZNF521 (ENSONIG00000009740)	psma8 (ENSONIG00000009734)	ss18 (ENSONIG00000009737)	KCTD1 (ENSONIG00000032280)	AQP4 (ENSONIG00000009731)	CDH2 (ENSONIG00000009709)	DSC1 (ENSONIG00000009697)	ENSONIG00000009689	tubb2 (ENSONIG00000009687)	slc22a23 (ENSONIG00000009683)	DSP (ENSONIG00000009681) #22	TNS3 (ENSONIG00000009674)	IGFBP3 (ENSONIG00000009669)	IGFBP1 (ENSONIG00000009667)	adcy1b (ENSONIG00000009657)	SIRT5 (ENSONIG00000009653)	ENSONIG00000030477	ENSONIG00000040123	ENSONIG00000035845	PHLPP1 (ENSONIG00000009647)	MEP1B (ENSONIG00000009643)	opn7a (ENSONIG00000009642)	ripk1l (ENSONIG00000009641)	dusp22b (ENSONIG00000009639)	irf4a (ENSONIG00000009637)	foxq1a (ENSONIG00000021432)
Midas cichlid	MODERN SPECIES	641	ENSACIG00000015857	ENSACIG00000015898	TTC39C (ENSACIG00000015911)	OSBPL1A (ENSACIG00000015935)	ENSACIG00000015985	ZNF521 (ENSACIG00000016013)	ss18 (ENSACIG00000016031)	psma8 (ENSACIG00000016049)	KCTD1 (ENSACIG00000016065)	AQP4 (ENSACIG00000016092)	CDH2 (ENSACIG00000016202)	dsc2l (ENSACIG00000016234)	ENSACIG00000016342	tubb2 (ENSACIG00000016390)	SLC22A23 (ENSACIG00000016579)	DSP (ENSACIG00000016672) #22	TNS3 (ENSACIG00000016907)	IGFBP3 (ENSACIG00000017002)	igfbp1b (ENSACIG00000017060)	adcy1b (ENSACIG00000017194)	SIRT5 (ENSACIG00000017231)	PHACTR1 (ENSACIG00000017248)	PHLPP1 (ENSACIG00000017274)	MEP1B (ENSACIG00000017305)	opn7a (ENSACIG00000017356)	ripk1l (ENSACIG00000017396)	dusp22b (ENSACIG00000017434)	irf4a (ENSACIG00000017452)	foxq1a (ENSACIG00000017470)	foxf2a (ENSACIG00000017477)	foxc1a (ENSACIG00000017489)
Pomacentridae	ANCESTRAL SPECIES	6	ENSGT00940000155638.wb.a.g	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000167019	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Pomacentridae_A	ANCESTRAL SPECIES	5	ENSGT00940000155638.wb.a.g	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000179839	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b.g	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Amphiprion	ANCESTRAL SPECIES	35	ENSGT00940000155638.wb.a.g	ENSGT00950000182917.b.a.a	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000179839	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b.g	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT01100000263533.b.a.a.b	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Clown anemonefish	MODERN SPECIES	873														tubb2 (ENSAOCG00000002022)	slc22a23 (ENSAOCG00000001312)	DSP (ENSAOCG00000018330) #22	TNS3 (ENSAOCG00000018309)	IGFBP3 (ENSAOCG00000018293)	igfbp1b (ENSAOCG00000018285)	adcy1b (ENSAOCG00000018269)	SIRT5 (ENSAOCG00000018198)	ENSAOCG00000018189	ENSAOCG00000018185	ENSAOCG00000018170	PHLPP1 (ENSAOCG00000018132)	MEP1B (ENSAOCG00000018043)	opn7a (ENSAOCG00000018016)	ripk1l (ENSAOCG00000001266)	dusp22b (ENSAOCG00000017936)	irf4a (ENSAOCG00000001260)	foxq1a (ENSAOCG00000017918)
Orange clownfish	MODERN SPECIES	1	ENSAPEG00000006127	TTC39C (ENSAPEG00000006058)	OSBPL1A (ENSAPEG00000005982)	ENSAPEG00000005950	ENSAPEG00000005920	ZNF521 (ENSAPEG00000005881)	ss18 (ENSAPEG00000005771)	psma8 (ENSAPEG00000005737)	KCTD1 (ENSAPEG00000005714)	AQP4 (ENSAPEG00000005665)	CDH2 (ENSAPEG00000005586)	dsc2l (ENSAPEG00000005505)	ENSAPEG00000005493	tubb2 (ENSAPEG00000005474)	SLC22A23 (ENSAPEG00000005434)	DSP (ENSAPEG00000005404) #22	ENSAPEG00000005353	ENSAPEG00000005304	IGFBP3 (ENSAPEG00000005245)	IGFBP1 (ENSAPEG00000005229)	adcy1b (ENSAPEG00000005123)	SIRT5 (ENSAPEG00000005104)	ENSAPEG00000005077	PHACTR1 (ENSAPEG00000005017)	PHLPP1 (ENSAPEG00000004948)	MEP1B (ENSAPEG00000004783)	opn7a (ENSAPEG00000004717)	ripk1l (ENSAPEG00000004703)	dusp22b (ENSAPEG00000004637)	irf4a (ENSAPEG00000004617)	foxq1a (ENSAPEG00000004602)
Spiny chromis	MODERN SPECIES	1608														tubb2 (ENSAPOG00000022652)	slc22a23 (ENSAPOG00000022623)	DSP (ENSAPOG00000022553) #22	TNS3 (ENSAPOG00000022516)	IGFBP3 (ENSAPOG00000022489)	IGFBP1 (ENSAPOG00000022479)	ENSAPOG00000022469
Bicolor damselfish	MODERN SPECIES	1737												dsc2l (ENSSPAG00000005885)	ENSSPAG00000006095	tubb2 (ENSSPAG00000006137)	SLC22A23 (ENSSPAG00000006534)	DSP (ENSSPAG00000006562) #22	TNS3 (ENSSPAG00000006595)	IGFBP3 (ENSSPAG00000006646)	igfbp1b (ENSSPAG00000006670)
Tiger tail seahorse	MODERN SPECIES	277	ENSHCOG00000003530	ENSHCOG00000003515	TTC39C (ENSHCOG00000003485)	OSBPL1A (ENSHCOG00000003408)	ENSHCOG00000003394	ZNF521 (ENSHCOG00000003388)	ss18 (ENSHCOG00000021070)	psma8 (ENSHCOG00000021052)	KCTD1 (ENSHCOG00000021009)	AQP4 (ENSHCOG00000020996)	CDH2 (ENSHCOG00000020987)	dsc2l (ENSHCOG00000020948)	ENSHCOG00000020945	tubb2 (ENSHCOG00000020921)	slc22a23 (ENSHCOG00000020796)	DSP (ENSHCOG00000020775) #22	TNS3 (ENSHCOG00000020753)	IGFBP3 (ENSHCOG00000020646)	igfbp1b (ENSHCOG00000020561)	adcy1b (ENSHCOG00000020550)	SIRT5 (ENSHCOG00000020510)	PHACTR1 (ENSHCOG00000020494)	PHLPP1 (ENSHCOG00000020453)	MEP1B (ENSHCOG00000020393)	opn7a (ENSHCOG00000020385)	ripk1l (ENSHCOG00000020345)	dusp22b (ENSHCOG00000020341)	irf4a (ENSHCOG00000020303)	foxq1a (ENSHCOG00000020294)	foxf2a (ENSHCOG00000020289)	foxc1a (ENSHCOG00000020281)
Pinecone sodierfish	MODERN SPECIES	8	ENSMMDG00005017208	ENSMMDG00005017213	TTC39C (ENSMMDG00005017229)	OSBPL1A (ENSMMDG00005017331)	ENSMMDG00005020992	ZNF521 (ENSMMDG00005021011)	ss18 (ENSMMDG00005021012)	psma8 (ENSMMDG00005021016)	KCTD1 (ENSMMDG00005021020)	AQP4 (ENSMMDG00005021026)	CDH2 (ENSMMDG00005021050)	ENSMMDG00005021681	ENSMMDG00005021685	tubb2 (ENSMMDG00005021687)	slc22a23 (ENSMMDG00005021710)	DSP (ENSMMDG00005021716) #22	ENSMMDG00005021722	ENSMMDG00005021726	IGFBP3 (ENSMMDG00005021738)	igfbp1b (ENSMMDG00005021740)	adcy1b (ENSMMDG00005021745)	SIRT5 (ENSMMDG00005021750)	PHACTR1 (ENSMMDG00005021752)	ENSMMDG00005021753	PHLPP1 (ENSMMDG00005021758)	MEP1B (ENSMMDG00005021769)	opn7a (ENSMMDG00005021783)	ripk1l (ENSMMDG00005021858)	dusp22b (ENSMMDG00005021861)	irf4a (ENSMMDG00005021863)	foxq1a (ENSMMDG00005021866)
Cod	MODERN SPECIES	21	vps4b (ENSGMOG00000003324)	LAMA3 (ENSGMOG00000003159)	TTC39C (ENSGMOG00000003129)	OSBPL1A (ENSGMOG00000003066)	ENSGMOG00000003059	ZNF521 (ENSGMOG00000003035)	SS18 (ENSGMOG00000003018)	PSMA8 (ENSGMOG00000002995)	KCTD1 (ENSGMOG00000002982)	AQP4 (ENSGMOG00000032654)	CDH2 (ENSGMOG00000002921)	ENSGMOG00000013140	ENSGMOG00000013127	ENSGMOG00000035818	ENSGMOG00000032764	ENSGMOG00000013073 #22	TNS3 (ENSGMOG00000013032)	ENSGMOG00000022250	IGFBP1 (ENSGMOG00000013011)	e2f5 (ENSGMOG00000012711)	ENSGMOG00000027155	ENSGMOG00000032975	ENSGMOG00000007370	myom1a (ENSGMOG00000005326)	ENSGMOG00000005291	EMILIN2 (ENSGMOG00000036485)	ENSGMOG00000032714	adcyap1b (ENSGMOG00000007155)	yes1 (ENSGMOG00000007146)	clul1 (ENSGMOG00000007133)	colec12 (ENSGMOG00000007124)
Protacanthopterygii	ANCESTRAL SPECIES	14	ENSGT01000000217386	ENSGT00970000194032	ENSGT00940000155295.z	ENSGT00940000163206.b.a.b	ENSGT00940000159287	ENSGT00940000156352	ENSGT00940000160354.i.a	ENSGT00940000160354.i.b	ENSGT00940000156453.a	ENSGT00940000156037.a.f	ENSGT00940000155981.g	ENSGT01030000234624.a	ENSGT01030000234624.b.b.c.b	ENSGT00940000154150	ENSGT00940000157354.j	ENSGT00940000154843.F.c.a #22	ENSGT00940000156328.a.a.b	ENSGT00940000158092.p	ENSGT00940000157394.b	ENSGT00940000154872.A	ENSGT00940000156080.k	ENSGT00940000155842.t	ENSGT00940000158137.c.a	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b	ENSGT00940000159347	ENSGT00940000157153.w	ENSGT00940000159059	ENSGT00940000162937.a.b	ENSGT00940000163866.a.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	511											ENSGT01030000234624.a.s.a	ENSGT01030000234624.b.b.c.b.i	ENSGT00940000154150	ENSGT00940000157354.j.e	ENSGT00940000157354.j.f.a.a	ENSGT00940000154843.F.c.a.e #22	ENSGT00940000156328.a.a.b.j	ENSGT00940000158092.p.a	ENSGT00940000157394.b.e	ENSGT00940000154872.A.c	ENSGT00940000156080.k	ENSGT00940000155842.t.u.a	ENSGT00940000158137.c.a.k	ENSGT01100000263524.B.b.b.m.b	ENSGT00940000159347.i	ENSGT00940000157153.w.d	ENSGT00940000159059.j	ENSGT00940000162937.a.b.f	ENSGT00940000163866.a.a.g	ENSGT00940000162303.a.b.c
Salmoninae_a	ANCESTRAL SPECIES	6	ENSGT00940000155638.wb.a.lb.b	ENSGT00950000182917.b.a.a.f	ENSGT00990000204641.a	ENSGT00970000194032.b	ENSGT00940000155295.z.e	ENSGT00940000159287.k	ENSGT00940000156352.e.a	ENSGT00940000160354.i.a	ENSGT00940000156453.a.i	ENSGT00940000156037.a.f.b	ENSGT00940000155981.g.d	ENSGT01030000234624.a.s.a	ENSGT01030000234624.b.b.c.b.i	ENSGT00940000154150.df.a	ENSGT00940000157354.j.f.a.a	ENSGT00940000154843.F.c.a.e #22	ENSGT00940000156328.a.a.b.j	ENSGT00940000158092.p.a	ENSGT00940000157394.b.e	ENSGT00940000154872.A.c	ENSGT00940000156080.k	ENSGT00940000155842.t.u.a	ENSGT00940000158137.c.a.k	ENSGT01100000263524.B.b.b.m.b	ENSGT00940000159347.i	ENSGT00940000157153.w.d	ENSGT00940000159059.j	ENSGT00940000162937.a.b.f	ENSGT00940000163866.a.a.g	ENSGT00940000162303.a.b.c	ENSGT00940000156211.a.b.c
Salmo	ANCESTRAL SPECIES	5	ENSGT00940000155638.wb.a.lb.b	ENSGT00950000182917.b.a.a.f	ENSGT00990000204641.a	ENSGT00970000194032.b	ENSGT00940000155295.z.e	ENSGT00940000159287.k	ENSGT00940000156352.e.a	ENSGT00940000160354.i.a	ENSGT00940000156453.a.i	ENSGT00940000156037.a.f.b	ENSGT00940000155981.g.d	ENSGT01030000234624.a.s.a	ENSGT01030000234624.b.b.c.b.i	ENSGT00940000154150.df.a	ENSGT00940000157354.j.f.b	ENSGT00940000154843.F.c.a.e #22	ENSGT00940000156328.a.a.b.j	ENSGT00940000158092.p.a	ENSGT00940000157394.b.e	ENSGT00940000154872.A.c	ENSGT00940000156080.k	ENSGT00940000155842.t.u.a	ENSGT00940000158137.c.a.k	ENSGT01100000263524.B.b.b.m.b	ENSGT00940000159347.i	ENSGT00940000157153.w.d	ENSGT00940000159059.j	ENSGT00940000162937.a.b.f	ENSGT00940000163866.a.a.g	ENSGT00940000162303.a.b.c	ENSGT00940000156211.a.b.c
River trout	MODERN SPECIES	24	kdsr (ENSSTUG00000028052)	vps4b (ENSSTUG00000026545)	TTC39C (ENSSTUG00000026364)	ENSSTUG00000026346	OSBPL1A (ENSSTUG00000025792)	ZNF521 (ENSSTUG00000025747)	ss18 (ENSSTUG00000025621)	PSMA8 (ENSSTUG00000025289)	KCTD1 (ENSSTUG00000025255)	AQP4 (ENSSTUG00000025027)	CDH2 (ENSSTUG00000020664)	ENSSTUG00000020465	ENSSTUG00000020309	tubb2 (ENSSTUG00000020266)	SLC22A23 (ENSSTUG00000020258)	DSP (ENSSTUG00000018301) #22	TNS3 (ENSSTUG00000017882)	IGFBP3 (ENSSTUG00000017865)	IGFBP1 (ENSSTUG00000017860)	adcy1b (ENSSTUG00000017396)	ENSSTUG00000017340	PHACTR1 (ENSSTUG00000017217)	PHLPP1 (ENSSTUG00000017079)	ENSSTUG00000017065	ENSSTUG00000017009	ripk1l (ENSSTUG00000016994)	dusp22b (ENSSTUG00000016989)	irf4a (ENSSTUG00000016969)	foxq1a (ENSSTUG00000016965)	foxf2a (ENSSTUG00000016957)	foxc1a (ENSSTUG00000016949)
Atlantic salmon	MODERN SPECIES	22	vps4b (ENSSSAG00000077506)	LAMA3 (ENSSSAG00000078246)	TTC39C (ENSSSAG00000078611)	ENSSSAG00000078667	OSBPL1A (ENSSSAG00000078714)	ZNF521 (ENSSSAG00000000242)	SS18 (ENSSSAG00000082109)	PSA7 (ENSSSAG00000000364)	KCTD1 (ENSSSAG00000000399)	AQP4 (ENSSSAG00000000411)	CDH2 (ENSSSAG00000000678)	ENSSSAG00000000942	ENSSSAG00000000957	tubb2 (ENSSSAG00000086767)	ENSSSAG00000110683	ENSSSAG00000001063 #22	TNS3 (ENSSSAG00000001460)	ENSSSAG00000101425	IGFBP3 (ENSSSAG00000105062)	ENSSSAG00000097769	IGFBP1 (ENSSSAG00000001734)	ADCY1 (ENSSSAG00000001783)	ENSSSAG00000001858	ENSSSAG00000093664	ENSSSAG00000084777	ENSSSAG00000119789	ENSSSAG00000001949	ENSSSAG00000001975	ENSSSAG00000109351	ripk1l (ENSSSAG00000001978)	irf4a (ENSSSAG00000001991)
Oncorhynchus	ANCESTRAL SPECIES	15	ENSGT00940000154973.a.a.c	ENSGT00950000182917.b.a.a.f	ENSGT00990000204641.a	ENSGT00970000194032.b	ENSGT00940000155295.z.e	ENSGT00940000159287.k	ENSGT00940000156352.e.a	ENSGT00940000160354.i.a	ENSGT00940000156453.a.i	ENSGT00940000156037.a.f.b	ENSGT00940000155981.g.d	ENSGT01030000234624.a.s.a	ENSGT01030000234624.b.b.c.b.i	ENSGT00940000154150.df.a	ENSGT00940000157354.j.f.a.a	ENSGT00940000154843.F.c.a.e #22	ENSGT00940000156328.a.a.b.j	ENSGT00940000158092.p.b.a.b.a	ENSGT00940000157394.b.e	ENSGT00940000154872.A.c	ENSGT00940000156080.k	ENSGT00940000155842.t.u.a	ENSGT00940000158137.c.a.k	ENSGT01100000263524.B.b.b.m.b	ENSGT00940000159347.i	ENSGT00940000157153.w.d	ENSGT00940000159059.j	ENSGT00940000162937.a.b.f	ENSGT00940000163866.a.a.g	ENSGT00940000162303.a.b.c	ENSGT00940000156211.a.b.c
Rainbow trout	MODERN SPECIES	20	kdsr (ENSOMYG00000038764)	vps4b (ENSOMYG00000036845)	TTC39C (ENSOMYG00000036476)	ENSOMYG00000036421	OSBPL1A (ENSOMYG00000035356)	ZNF521 (ENSOMYG00000035153)	SS18 (ENSOMYG00000035116)	PSMA8 (ENSOMYG00000035075)	KCTD1 (ENSOMYG00000035049)	AQP4 (ENSOMYG00000035014)	CDH2 (ENSOMYG00000032107)	ENSOMYG00000031533	ENSOMYG00000031415	tubb2 (ENSOMYG00000031371)	ENSOMYG00000031366	ENSOMYG00000029385 #22	TNS3 (ENSOMYG00000028397)	IGFBP3 (ENSOMYG00000028231)	IGFBP1 (ENSOMYG00000028256)	ADCY1 (ENSOMYG00000027934)	ENSOMYG00000027684	ENSOMYG00000027677	ENSOMYG00000027168	ENSOMYG00000026874	ENSOMYG00000026853	ripk1l (ENSOMYG00000026838)	dusp22b (ENSOMYG00000058162)	irf-10 (ENSOMYG00000026797)	foxq1a (ENSOMYG00000026767)	foxf2a (ENSOMYG00000026757)	foxc1a (ENSOMYG00000026750)
Oncorhynchus_a	ANCESTRAL SPECIES	22	ENSGT00940000154973.a.a.c	ENSGT00950000182917.b.a.a.f	ENSGT00990000204641.a	ENSGT00970000194032.b	ENSGT00940000155295.z.e	ENSGT00940000159287.k	ENSGT00940000156352.e.a	ENSGT00940000160354.i.a	ENSGT00940000156453.a.i	ENSGT00940000156037.a.f.b	ENSGT00940000155981.g.d	ENSGT01030000234624.a.s.a	ENSGT01030000234624.b.b.c.b.i	ENSGT00940000154150.df.a	ENSGT00940000157354.j.f.a.a	ENSGT00940000154843.F.c.a.e #22	ENSGT00940000156328.a.a.b.j	ENSGT00940000158092.p.a	ENSGT00940000157394.b.e	ENSGT00940000154872.A.c	ENSGT00940000156080.k	ENSGT00940000155842.t.u.a	ENSGT00940000158137.c.a.k	ENSGT01100000263524.B.b.b.m.b	ENSGT00940000159347.i	ENSGT00940000157153.w.d	ENSGT00940000159059.j	ENSGT00940000162937.a.b.f	ENSGT00940000163866.a.a.g	ENSGT00940000162303.a.b.c	ENSGT00940000156211.a.b.c
Chinook salmon	MODERN SPECIES	20	ENSOTSG00005002612	ENSOTSG00005046883	OSBPL1A (ENSOTSG00005046841)	ZNF521 (ENSOTSG00005046839)	ss18 (ENSOTSG00005046838)	PSMA8 (ENSOTSG00005046837)	KCTD1 (ENSOTSG00005046835)	AQP4 (ENSOTSG00005046834)	tfr2 (ENSOTSG00005046833)	ENSOTSG00005046832	CDH2 (ENSOTSG00005045646)	ENSOTSG00005045620	ENSOTSG00005045618	ENSOTSG00005045615	slc22a23 (ENSOTSG00005045613)	DSP (ENSOTSG00005044853) #22	TNS3 (ENSOTSG00005044832)	IGFBP3 (ENSOTSG00005044830)	igfbp1b (ENSOTSG00005044829)	adcy1b (ENSOTSG00005044529)	SIRT5 (ENSOTSG00005044520)	ENSOTSG00005044518	PHLPP1 (ENSOTSG00005044502)	opn7a (ENSOTSG00005044461)	ripk1l (ENSOTSG00005044460)	dusp22b (ENSOTSG00005044459)	irf4a (ENSOTSG00005044458)	foxq1a (ENSOTSG00005044457)	foxf2a (ENSOTSG00005044456)	foxc1a (ENSOTSG00005044455)	MYLK4 (ENSOTSG00005044454)
Coho salmon	MODERN SPECIES	19	TTC39C (ENSOKIG00005015903)	ENSOKIG00005015888	OSBPL1A (ENSOKIG00005011331)	ZNF521 (ENSOKIG00005011096)	SS18 (ENSOKIG00005011033)	PSMA8 (ENSOKIG00005010511)	ENSOKIG00005010482	KCTD1 (ENSOKIG00005010470)	AQP4 (ENSOKIG00005010450)	ENSOKIG00005010445	CDH2 (ENSOKIG00005006649)	ENSOKIG00005006438	ENSOKIG00005006373	tubb2 (ENSOKIG00005006339)	SLC22A23 (ENSOKIG00005006310)	DSP (ENSOKIG00005028793) #22	TNS3 (ENSOKIG00005028568)	IGFBP3 (ENSOKIG00005028528)	IGFBP1 (ENSOKIG00005028491)	ADCY1 (ENSOKIG00005028104)	ENSOKIG00005028044	PHACTR1 (ENSOKIG00005028032)	PHLPP1 (ENSOKIG00005027458)	opn7a (ENSOKIG00005027394)	ripk1l (ENSOKIG00005027370)	dusp22b (ENSOKIG00005027347)	irf4a (ENSOKIG00005027316)	foxq1a (ENSOKIG00005027304)	foxf2a (ENSOKIG00005027300)	foxc1a (ENSOKIG00005027293)	ENSOKIG00005027286
Huchen	MODERN SPECIES	215	ENSHHUG00000021911	ENSHHUG00000021923	ENSHHUG00000021948	ENSHHUG00000021971	impa1 (ENSHHUG00000022004)	ENSHHUG00000022016	CDH7 (ENSHHUG00000022043)	ENSHHUG00000022847	DSEL (ENSHHUG00000022857)	ENSHHUG00000022861	ENSHHUG00000022862	ENSHHUG00000022932	tubb2 (ENSHHUG00000022960)	ENSHHUG00000022970	ENSHHUG00000022981	DSP (ENSHHUG00000022995) #22	TNS3 (ENSHHUG00000023144)	IGFBP3 (ENSHHUG00000023178)	igfbp1b (ENSHHUG00000023188)	adcy1b (ENSHHUG00000023201)	ENSHHUG00000023225	ENSHHUG00000023231	ENSHHUG00000023237	ENSHHUG00000023240	PHLPP1 (ENSHHUG00000023257)	ENSHHUG00000023280	ENSHHUG00000023281	ripk1l (ENSHHUG00000023299)	dusp22b (ENSHHUG00000023314)	irf4a (ENSHHUG00000023321)	foxq1a (ENSHHUG00000023392)
Salmoninae	ANCESTRAL SPECIES	482																ENSGT00940000154843.F.c.a.f #22	ENSGT00940000156328.a.a.b.i	ENSGT00940000158092.p.b	ENSGT00940000157394.b.f	ENSGT00940000154872.A.d	ENSGT00940000182575	ENSGT00940000155842.t.u.b	ENSGT00940000158137.c.a.l	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b.m.a	ENSGT00940000159347.j	ENSGT00940000157153.w.c	ENSGT00940000159059.i	ENSGT00940000162937.a.b.e	ENSGT00940000163866.a.a.h
Salmoninae_a	ANCESTRAL SPECIES	2	ENSGT00940000155638.wb.a.mb	ENSGT00950000182917.b.a.a.e	ENSGT00970000194032.a	ENSGT00940000155295.z.f	ENSGT00940000163206.b.a.b	ENSGT00940000159287.l	ENSGT00940000156352.e.b	ENSGT00940000160354.i.b	ENSGT00940000156453.a.j	ENSGT00940000156037.a.f.a	ENSGT00940000155981.g.c	ENSGT01030000234624.a.s.b	ENSGT01030000234624.b.b.c.b.j	ENSGT00940000154150.df.b	ENSGT00940000157354.j.e	ENSGT00940000154843.F.c.a.f #22	ENSGT00940000156328.a.a.b.i	ENSGT00940000158092.p.b.b	ENSGT00940000157394.b.f	ENSGT00940000154872.A.d	ENSGT00940000182575	ENSGT00940000155842.t.u.b	ENSGT00940000155842.t.v	ENSGT00940000158137.c.a.l	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b.m.a	ENSGT00940000159347.j	ENSGT00940000157153.w.c	ENSGT00940000159059.i	ENSGT00940000162937.a.b.e
Salmo	ANCESTRAL SPECIES	21	ENSGT00940000155638.wb.a.mb	ENSGT00950000182917.b.a.a.e	ENSGT00970000194032.a	ENSGT00940000155295.z.f	ENSGT00940000163206.b.a.b	ENSGT00940000159287.l	ENSGT00940000156352.e.b	ENSGT00940000160354.i.b	ENSGT00940000156453.a.j	ENSGT00940000156037.a.f.a	ENSGT00940000155981.g.c	ENSGT01030000234624.a.s.b	ENSGT01030000234624.b.b.c.b.j	ENSGT00940000154150.df.b	ENSGT00940000157354.j.e	ENSGT00940000154843.F.c.a.f #22	ENSGT00940000156328.a.a.b.i	ENSGT00940000158092.p.b.b	ENSGT00990000211270	ENSGT00940000157394.b.f	ENSGT00940000154872.A.d	ENSGT00940000155842.t.u.b	ENSGT00940000155842.t.v	ENSGT00940000158137.c.a.l	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b.m.a	ENSGT00940000159347.j	ENSGT00940000157153.w.c	ENSGT00940000159059.i	ENSGT00940000162937.a.b.e
River trout	MODERN SPECIES	13	ENSSTUG00000048593	OSBPL1A (ENSSTUG00000048639)	ENSSTUG00000049518	ENSSTUG00000049524	ZNF521 (ENSSTUG00000049525)	ss18 (ENSSTUG00000049539)	PSMA8 (ENSSTUG00000049555)	KCTD1 (ENSSTUG00000049559)	AQP4 (ENSSTUG00000049563)	CDH2 (ENSSTUG00000049609)	ENSSTUG00000050301	ENSSTUG00000050320	ENSSTUG00000050328	tubb2 (ENSSTUG00000050337)	SLC22A23 (ENSSTUG00000050342)	DSP (ENSSTUG00000050348) #22	TNS3 (ENSSTUG00000050372)	IGFBP3 (ENSSTUG00000050458)	ENSSTUG00000050460	IGFBP1 (ENSSTUG00000050461)	adcy1b (ENSSTUG00000050469)	PHACTR1 (ENSSTUG00000050520)	ENSSTUG00000050529	PHLPP1 (ENSSTUG00000050534)	MEP1B (ENSSTUG00000050545)	ENSSTUG00000050551	ENSSTUG00000050553	ripk1l (ENSSTUG00000050555)	dusp22b (ENSSTUG00000050557)	irf4a (ENSSTUG00000050563)	foxq1a (ENSSTUG00000050567)
Atlantic salmon	MODERN SPECIES	5	vps4b (ENSSSAG00000079067)	LAMA3 (ENSSSAG00000079146)	TTC39C (ENSSSAG00000103768)	OSBPL1A (ENSSSAG00000079414)	ENSSSAG00000079532	ZNF521 (ENSSSAG00000079536)	SS18 (ENSSSAG00000079554)	PSMA8 (ENSSSAG00000079572)	KCTD1 (ENSSSAG00000079600)	AQP4 (ENSSSAG00000079610)	CDH2 (ENSSSAG00000079622)	ENSSSAG00000079671	ENSSSAG00000079678	tbb2a (ENSSSAG00000079687)	ENSSSAG00000090689	ENSSSAG00000079718 #22	TNS3 (ENSSSAG00000079851)	IGFBP3 (ENSSSAG00000080183)	ENSSSAG00000080191	ENSSSAG00000091522	ADCY1 (ENSSSAG00000080202)	ENSSSAG00000088530	ENSSSAG00000001879	ENSSSAG00000080265	ENSSSAG00000114392	ENSSSAG00000080306	rnf138 (ENSSSAG00000080311)	ENSSSAG00000110993	ripk1 (ENSSSAG00000080317)	irf4a (ENSSSAG00000080329)	foxf2 (ENSSSAG00000080335)
Oncorhynchus	ANCESTRAL SPECIES	11	ENSGT00940000154973.a.a.d	ENSGT00940000155638.wb.a.mb	ENSGT00950000182917.b.a.a.e	ENSGT00940000155295.z.f	ENSGT00940000163206.b.a.b	ENSGT00940000159287.l	ENSGT00940000156352.e.b	ENSGT00940000160354.i.b	ENSGT00940000156453.a.j	ENSGT00940000156037.a.f.a	ENSGT00940000155981.g.c	ENSGT01030000234624.a.s.b	ENSGT01030000234624.b.b.c.b.j	ENSGT00940000154150.df.b	ENSGT00940000157354.j.e	ENSGT00940000154843.F.c.a.f #22	ENSGT00940000156328.a.a.b.i	ENSGT00940000158092.p.b.b	ENSGT00940000157394.b.f	ENSGT00940000154872.A.d	ENSGT00940000155842.t.u.b	ENSGT00940000158137.c.a.l	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b.m.a	ENSGT00940000159347.j	ENSGT00940000157153.w.c	ENSGT00940000159059.i	ENSGT00940000162937.a.b.e	ENSGT00940000163866.a.a.h	ENSGT00940000162303.a.b.d
Oncorhynchus_a	ANCESTRAL SPECIES	24	ENSGT00940000154973.a.a.d	ENSGT00940000155638.wb.a.mb	ENSGT00950000182917.b.a.a.e	ENSGT00940000155295.z.f	ENSGT00940000163206.b.a.b	ENSGT00940000159287.l	ENSGT00940000156352.e.b	ENSGT00940000160354.i.b	ENSGT00940000156453.a.j	ENSGT00940000156037.a.f.a	ENSGT00940000155981.g.c	ENSGT01030000234624.a.s.b	ENSGT01030000234624.b.b.c.b.j	ENSGT00940000154150.df.b	ENSGT00940000157354.j.e	ENSGT00940000154843.F.c.a.f #22	ENSGT00940000156328.a.a.b.i	ENSGT00940000158092.p.b.b	ENSGT00940000157394.b.f	ENSGT00940000154872.A.d	ENSGT00940000155842.t.u.b	ENSGT00940000158137.c.a.l	ENSGT00950000183111.b.a.a	ENSGT00950000182909.b.a.a.cb	ENSGT01100000263524.B.b.b.m.a	ENSGT00940000159347.j	ENSGT00940000157153.w.c	ENSGT00940000159059.i	ENSGT00940000162937.a.b.e	ENSGT00940000163866.a.a.h	ENSGT00940000162303.a.b.d
Chinook salmon	MODERN SPECIES	1	LAMA3 (ENSOTSG00005046092)	TTC39C (ENSOTSG00005046093)	OSBPL1A (ENSOTSG00005046095)	ENSOTSG00005046656	ZNF521 (ENSOTSG00005046657)	ss18 (ENSOTSG00005046658)	PSMA8 (ENSOTSG00005046659)	KCTD1 (ENSOTSG00005046660)	AQP4 (ENSOTSG00005046661)	CDH2 (ENSOTSG00005046663)	ENSOTSG00005047425	ENSOTSG00005047426	tubb2 (ENSOTSG00005047427)	ENSOTSG00005047428	SLC22A23 (ENSOTSG00005047429)	DSP (ENSOTSG00005047444) #22	TNS3 (ENSOTSG00005047579)	IGFBP3 (ENSOTSG00005047592)	igfbp1b (ENSOTSG00005047593)	adcy1b (ENSOTSG00005047597)	PHACTR1 (ENSOTSG00005047601)	PHLPP1 (ENSOTSG00005047603)	MEP1B (ENSOTSG00005047611)	ENSOTSG00005047612	opn7a (ENSOTSG00005047616)	ripk1l (ENSOTSG00005047619)	dusp22b (ENSOTSG00005047620)	irf4a (ENSOTSG00005047622)	foxq1a (ENSOTSG00005047624)	foxf2a (ENSOTSG00005047625)	foxc1a (ENSOTSG00005047626)
Coho salmon	MODERN SPECIES	23	TTC39C (ENSOKIG00005044770)	OSBPL1A (ENSOKIG00005045274)	ENSOKIG00005045609	ENSOKIG00005045614	ZNF521 (ENSOKIG00005045641)	ENSOKIG00005045657	ss18 (ENSOKIG00005020593)	PSMA8 (ENSOKIG00005020644)	KCTD1 (ENSOKIG00005020710)	AQP4 (ENSOKIG00005020735)	ENSOKIG00005020744	CDH2 (ENSOKIG00005021087)	ENSOKIG00005025941	ENSOKIG00005026096	ENSOKIG00005026167	DSP (ENSOKIG00005026305) #22	TNS3 (ENSOKIG00005028639)	IGFBP3 (ENSOKIG00005028986)	IGFBP1 (ENSOKIG00005028999)	adcy1b (ENSOKIG00005029062)	PHACTR1 (ENSOKIG00005029337)	ENSOKIG00005029394	PHLPP1 (ENSOKIG00005029438)	MEP1B (ENSOKIG00005029850)	ENSOKIG00005029898	ENSOKIG00005029927	ripk1l (ENSOKIG00005029960)	dusp22b (ENSOKIG00005029978)	irf4a (ENSOKIG00005029995)	foxq1a (ENSOKIG00005030027)	foxf2a (ENSOKIG00005030033)
Rainbow trout	MODERN SPECIES	29	ENSOMYG00000068421	ENSOMYG00000047922	SS18 (ENSOMYG00000037239)	ENSOMYG00000077031	PSMA8 (ENSOMYG00000037281)	KCTD1 (ENSOMYG00000037337)	ENSOMYG00000069120	AQP4 (ENSOMYG00000037366)	ENSOMYG00000066444	CDH2 (ENSOMYG00000038138)	ENSOMYG00000042640	ENSOMYG00000001398	tubb2 (ENSOMYG00000001436)	ENSOMYG00000001493	ENSOMYG00000048629	ENSOMYG00000002065 #22	TNS3 (ENSOMYG00000002544)	IGFBP3 (ENSOMYG00000002589)	igfbp1 (ENSOMYG00000002616)	ADCY1 (ENSOMYG00000002880)	ENSOMYG00000070003	ENSOMYG00000050787	ENSOMYG00000003057	ENSOMYG00000066510	ENSOMYG00000053000	ENSOMYG00000003525	ENSOMYG00000004091	ENSOMYG00000004133	ENSOMYG00000057206	dusp22b (ENSOMYG00000004177)	irf4a (ENSOMYG00000004267)
Huchen	MODERN SPECIES	296																DSP (ENSHHUG00000010555) #22	ENSHHUG00000010549	TNS3 (ENSHHUG00000010492)	IGFBP3 (ENSHHUG00000010467)	IGFBP1 (ENSHHUG00000010461)	adcy1b (ENSHHUG00000010212)	ENSHHUG00000010192	ENSHHUG00000010181	ENSHHUG00000010172	ENSHHUG00000010168	PHLPP1 (ENSHHUG00000009840)	MEP1B (ENSHHUG00000009790)	ENSHHUG00000009767	ENSHHUG00000009693	ripk1l (ENSHHUG00000009671)	dusp22b (ENSHHUG00000009622)
Northern pike	MODERN SPECIES	2	ENSELUG00000017878	ENSELUG00000017890	OSBPL1A (ENSELUG00000017991)	ENSELUG00000018026	ZNF521 (ENSELUG00000018072)	ss18 (ENSELUG00000018184)	PSMA8 (ENSELUG00000018226)	ENSELUG00000025852	KCTD1 (ENSELUG00000018289)	AQP4 (ENSELUG00000018339)	CDH2 (ENSELUG00000018413)	ENSELUG00000018430	ENSELUG00000000788	ENSELUG00000034646	slc22a23 (ENSELUG00000018595)	DSP (ENSELUG00000018625) #22	TNS3 (ENSELUG00000018646)	igfbp1b (ENSELUG00000025505)	IGFBP3 (ENSELUG00000018696)	adcy1b (ENSELUG00000018779)	SIRT5 (ENSELUG00000018832)	PHLPP1 (ENSELUG00000019046)	MEP1B (ENSELUG00000019128)	ENSELUG00000019236	ripk1l (ENSELUG00000019275)	dusp22b (ENSELUG00000019302)	irf4a (ENSELUG00000019609)	foxf2a (ENSELUG00000019684)	ENSELUG00000027282	foxc1a (ENSELUG00000019719)	ENSELUG00000029551
Clupeocephala	ANCESTRAL SPECIES	242									ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.t	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b	ENSGT00940000163886.A	ENSGT00950000183102.A.b.a	ENSGT00950000183111.b.a.b	ENSGT00950000182909.b.a.a.db	ENSGT00390000000568	ENSGT00940000158019	ENSGT00940000153229.A.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	151				ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.t	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a	ENSGT00940000162747
Acanthomorphata	ANCESTRAL SPECIES	21	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.t	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.t	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676
Percomorphaceae	ANCESTRAL SPECIES	52	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.t	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000155842.s.e.a	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000155842.s.e.a	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b
Mangrove rivulus	MODERN SPECIES	338												BPHL (ENSKMAG00000017625)	ENSKMAG00000017614	SLC22A23 (ENSKMAG00000017581)	ENSKMAG00000017562	DSP (ENSKMAG00000017518) #22	tbc1d7 (ENSKMAG00000017485)	ENSKMAG00000017473	ENSKMAG00000017458	ENSKMAG00000017446	sirt5 (ENSKMAG00000017434)	adcy1a (ENSKMAG00000017328)	igfbp1a (ENSKMAG00000017303)	igfbp3 (ENSKMAG00000017293)	ENSKMAG00000017280	ENSKMAG00000017257	si:ch211-191a24.4 (ENSKMAG00000017237)	C8orf82 (ENSKMAG00000017230)	naprt (ENSKMAG00000017207)	ENSKMAG00000017193	ENSKMAG00000017124
Turquoise killifish	MODERN SPECIES	1626	ADCYAP1R1 (ENSNFUG00015006555)	ENSNFUG00015007357	MYLK4 (ENSNFUG00015007364)	GMDS (ENSNFUG00015007380)	foxc1b (ENSNFUG00015007456)	ENSNFUG00015007458	foxq1b (ENSNFUG00015007459)	exoc2 (ENSNFUG00015007472)	ENSNFUG00015007521	DUSP22 (ENSNFUG00015007531)	BPHL (ENSNFUG00015007536)	ENSNFUG00015007543	SLC22A23 (ENSNFUG00015007552)	ENSNFUG00015007559	ENSNFUG00015007562	ENSNFUG00015007621 #22	TBC1D7 (ENSNFUG00015008085)	PHACTR1 (ENSNFUG00015008101)	sirt5 (ENSNFUG00015008145)	adcy1a (ENSNFUG00015008168)	IGFBP1A (ENSNFUG00015008202)	IGFBP3 (ENSNFUG00015008208)	ENSNFUG00015008214	PHLPP1 (ENSNFUG00015008262)	MARVELD3 (ENSNFUG00015008625)	C20H8ORF82 (ENSNFUG00015008628)	NAPRT1 (ENSNFUG00015008632)	PLCG1 (ENSNFUG00015008639)	ENSNFUG00015009202	ENSNFUG00015009216	ENSNFUG00015009228
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b.a
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b.a	ENSGT00940000155265.b.b.b.b
Platyfish	MODERN SPECIES	23	bmb (ENSXMAG00000028194)	gfus.1 (ENSXMAG00000006026)	serpinb1 (ENSXMAG00000006132)	MYLK4 (ENSXMAG00000006166)	gmds (ENSXMAG00000006178)	foxc1b (ENSXMAG00000026771)	ENSXMAG00000006203	foxq1b (ENSXMAG00000019810)	exoc2 (ENSXMAG00000006205)	ENSXMAG00000028270	ENSXMAG00000006246	DUSP22 (ENSXMAG00000006258)	BPHL (ENSXMAG00000006270)	ENSXMAG00000021513	SLC22A23 (ENSXMAG00000006277)	ENSXMAG00000028548 #22	tbc1d7 (ENSXMAG00000006283)	PHACTR1 (ENSXMAG00000006293)	sirt5 (ENSXMAG00000029946)	adcy1a (ENSXMAG00000006304)	igfbp1a (ENSXMAG00000006325)	igfbp3 (ENSXMAG00000006331)	TNS3 (ENSXMAG00000006335)	ENSXMAG00000001851	si:ch211-191a24.4 (ENSXMAG00000001849)	C8orf82 (ENSXMAG00000024586)	naprt (ENSXMAG00000001844)	ENSXMAG00000001816	ENSXMAG00000001815	ENSXMAG00000024657	ENSXMAG00000023850
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000165627.a.b.c.a.c.a	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b.a	ENSGT00940000155265.b.b.b.b
NAME_6	DUPLICATION
NAME_6	ANCESTRAL SPECIES	217	ENSGT00940000165627.a.b.c.a.c.a	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.a #22
Sailfin molly	MODERN SPECIES	520	ENSPLAG00000005241	bmb (ENSPLAG00000005217)	gfus.1 (ENSPLAG00000005207)	serpinb1 (ENSPLAG00000005190)	MYLK4 (ENSPLAG00000005181)	gmds (ENSPLAG00000005107)	foxc1b (ENSPLAG00000005100)	ENSPLAG00000005081	foxq1b (ENSPLAG00000005054)	exoc2 (ENSPLAG00000005035)	ENSPLAG00000004958	ENSPLAG00000004935	BPHL (ENSPLAG00000004908)	ENSPLAG00000004894	SLC22A23 (ENSPLAG00000004886)	DSP (ENSPLAG00000004834) #22	tbc1d7 (ENSPLAG00000004663)	ENSPLAG00000004633	ENSPLAG00000004618
Amazon molly	MODERN SPECIES	521	bmb (ENSPFOG00000000333)	gfus.1 (ENSPFOG00000000344)	serpinb1 (ENSPFOG00000000383)	MYLK4 (ENSPFOG00000000417)	gmds (ENSPFOG00000000460)	foxc1b (ENSPFOG00000020963)	ENSPFOG00000000493	foxq1b (ENSPFOG00000020964)	exoc2 (ENSPFOG00000000518)	ENSPFOG00000000657	DUSP22 (ENSPFOG00000000707)	BPHL (ENSPFOG00000000738)	ENSPFOG00000000913	SLC22A23 (ENSPFOG00000000835)	ENSPFOG00000023354	DSP (ENSPFOG00000001001) #22
NAME_6	ANCESTRAL SPECIES	19																ENSGT00940000154843.F.c.b.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b.a	ENSGT00940000155265.b.b.b.b
Amazon molly	MODERN SPECIES	262															ENSPFOG00000024743	ENSPFOG00000022504 #22	tbc1d7 (ENSPFOG00000023659)	PHACTR1 (ENSPFOG00000024262)	sirt5 (ENSPFOG00000022391)	adcy1a (ENSPFOG00000022496)	igfbp1a (ENSPFOG00000023943)	igfbp3 (ENSPFOG00000022181)	TNS3 (ENSPFOG00000021910)	ENSPFOG00000023638	si:ch211-191a24.4 (ENSPFOG00000024421)	C8orf82 (ENSPFOG00000023380)	naprt (ENSPFOG00000023584)	ENSPFOG00000022714	ENSPFOG00000021913	ENSPFOG00000022964	ADCYAP1R1 (ENSPFOG00000022966)
Guppy	MODERN SPECIES	456	ENSPREG00000010210	bmb (ENSPREG00000010195)	gfus.1 (ENSPREG00000010122)	serpinb1 (ENSPREG00000010101)	MYLK4 (ENSPREG00000010045)	gmds (ENSPREG00000010018)	foxc1b (ENSPREG00000009977)	ENSPREG00000009964	foxq1b (ENSPREG00000009956)	exoc2 (ENSPREG00000009865)	ENSPREG00000009822	ENSPREG00000009809	BPHL (ENSPREG00000009797)	ENSPREG00000009785	SLC22A23 (ENSPREG00000009766)	DSP (ENSPREG00000009704) #22	tbc1d7 (ENSPREG00000009673)	PHACTR1 (ENSPREG00000009631)	sirt5 (ENSPREG00000009565)	adcy1a (ENSPREG00000009486)	igfbp1a (ENSPREG00000009461)	igfbp3 (ENSPREG00000009451)	ENSPREG00000009366	ENSPREG00000009347	ENSPREG00000009332	si:ch211-191a24.4 (ENSPREG00000009320)	C8orf82 (ENSPREG00000009297)	naprt (ENSPREG00000009280)	ENSPREG00000009185	ENSPREG00000009146	ENSPREG00000009100
NAME_4	ANCESTRAL SPECIES	80	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b.a	ENSGT00940000157362.d
Mummichog	MODERN SPECIES	2298	pycr3 (ENSFHEG00000007588)	bmb (ENSFHEG00000007543)	gfus.1 (ENSFHEG00000007534)	serpinb1 (ENSFHEG00000007493)	MYLK4 (ENSFHEG00000007485)	gmds (ENSFHEG00000007458)	foxc1b (ENSFHEG00000007420)	ENSFHEG00000007413	foxq1b (ENSFHEG00000007409)	exoc2 (ENSFHEG00000007391)	ENSFHEG00000007370	ENSFHEG00000007338	BPHL (ENSFHEG00000007316)	ENSFHEG00000007282	SLC22A23 (ENSFHEG00000007217)	DSP (ENSFHEG00000007171) #22	tbc1d7 (ENSFHEG00000006999)	PHACTR1 (ENSFHEG00000006956)	sirt5 (ENSFHEG00000006880)	adcy1a (ENSFHEG00000006710)	igfbp1a (ENSFHEG00000006343)	ENSFHEG00000006335	igfbp3 (ENSFHEG00000006312)	ENSFHEG00000006296	ENSFHEG00000006281	ENSFHEG00000006272	ENSFHEG00000006245	si:ch211-191a24.4 (ENSFHEG00000006229)	C8orf82 (ENSFHEG00000006214)	ENSFHEG00000006205	ENSFHEG00000006189
Sheepshead minnow	MODERN SPECIES	179							ENSCVAG00000017962	ENSCVAG00000017949	ENSCVAG00000017913	borcs7 (ENSCVAG00000017897)	cyp17a1 (ENSCVAG00000017877)	BPHL (ENSCVAG00000017838)	ENSCVAG00000017834	SLC22A23 (ENSCVAG00000017828)	ENSCVAG00000017764	DSP (ENSCVAG00000000462) #22	tbc1d7 (ENSCVAG00000000449)	PHACTR1 (ENSCVAG00000017548)	sirt5 (ENSCVAG00000017524)	adcy1a (ENSCVAG00000017481)	igfbp1a (ENSCVAG00000017395)	igfbp3 (ENSCVAG00000017388)	ENSCVAG00000017380	ENSCVAG00000017348	ENSCVAG00000017280	si:ch211-191a24.4 (ENSCVAG00000017269)	C8orf82 (ENSCVAG00000017257)	naprt (ENSCVAG00000017244)	ENSCVAG00000017231	NOS1AP (ENSCVAG00000016911)	ENSCVAG00000016811
Oryzias	ANCESTRAL SPECIES	5	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000155842.s.e.a	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a.c.b	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a
Oryzias_b	ANCESTRAL SPECIES	15	ENSGT00950000183044.a.b	ENSGT00390000004681.a.a	ENSGT00740000115898	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00940000162855.b	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a.c.b	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000157362.d
Indian medaka	MODERN SPECIES	13	pycr3 (ENSOMEG00000013669)	gfus.1 (ENSOMEG00000013720)	bmb (ENSOMEG00000013752)	ENSOMEG00000013772	ENSOMEG00000013791	serpinb1 (ENSOMEG00000013821)	MYLK4 (ENSOMEG00000013922)	gmds (ENSOMEG00000014001)	foxc1b (ENSOMEG00000014024)	ENSOMEG00000014039	foxq1b (ENSOMEG00000014047)	exoc2 (ENSOMEG00000014167)	ENSOMEG00000014211	ENSOMEG00000014224	SLC22A23 (ENSOMEG00000014253)	ENSOMEG00000014533 #22	tbc1d7 (ENSOMEG00000014647)	PHACTR1 (ENSOMEG00000014703)	sirt5 (ENSOMEG00000014728)	adcy1a (ENSOMEG00000014801)	igfbp1a (ENSOMEG00000014831)	igfbp3 (ENSOMEG00000014843)	TNS3 (ENSOMEG00000014901)	ENSOMEG00000014987	si:ch211-191a24.4 (ENSOMEG00000015006)	si:ch211-191a24.4 (ENSOMEG00000015027)	ENSOMEG00000015037	ENSOMEG00000015058	C8orf82 (ENSOMEG00000015077)	naprt (ENSOMEG00000015098)	ENSOMEG00000015160
Javanese ricefish	MODERN SPECIES	18	bmb (ENSOJAG00000007248)	gfus.1 (ENSOJAG00000007261)	serpinb1 (ENSOJAG00000007436)	gmds (ENSOJAG00000007482)	foxc1b (ENSOJAG00000007752)	ENSOJAG00000007767	ENSOJAG00000007781	ENSOJAG00000007794	foxq1b (ENSOJAG00000007806)	exoc2 (ENSOJAG00000007824)	ENSOJAG00000007896	ENSOJAG00000007921	BPHL (ENSOJAG00000007943)	ENSOJAG00000008047	SLC22A23 (ENSOJAG00000008061)	ENSOJAG00000008200 #22	ENSOJAG00000008329	tbc1d7 (ENSOJAG00000008357)	ENSOJAG00000008380	ENSOJAG00000008428	ENSOJAG00000008446	ENSOJAG00000008451	ENSOJAG00000008457	ENSOJAG00000008463	sirt5 (ENSOJAG00000008498)	adcy1a (ENSOJAG00000008595)	igfbp1a (ENSOJAG00000009432)	igfbp3 (ENSOJAG00000009440)	ENSOJAG00000009448	ENSOJAG00000009462	ENSOJAG00000009524
Oryzias_a	ANCESTRAL SPECIES	14	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a.c.b	ENSGT00950000183102.A.b.a.c.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000157362.d
Japanese Medaka HdrR	MODERN SPECIES	18	pycr3 (ENSORLG00000012480)	bmb (ENSORLG00000012489)	gfus.1 (ENSORLG00000012522)	serpinb1 (ENSORLG00000012555)	MYLK4 (ENSORLG00000012568)	gmds (ENSORLG00000012583)	foxc1b (ENSORLG00000012589)	foxf2b (ENSORLG00000012595)	foxq1b (ENSORLG00000027549)	exoc2 (ENSORLG00000012658)	ENSORLG00000012712	ENSORLG00000012729	BPHL (ENSORLG00000012743)	ENSORLG00000012749	SLC22A23 (ENSORLG00000012769)	ENSORLG00000029476 #22	tbc1d7 (ENSORLG00000012814)	ENSORLG00000012847	sirt5 (ENSORLG00000012864)	adcy1a (ENSORLG00000012874)	igfbp1a (ENSORLG00000024957)	igfbp3 (ENSORLG00000022715)	ENSORLG00000027508	TNS3 (ENSORLG00000012903)	ENSORLG00000024402	si:ch211-191a24.4 (ENSORLG00000024510)	si:ch211-191a24.4 (ENSORLG00000023117)	C8orf82 (ENSORLG00000029013)	naprt (ENSORLG00000012928)	ENSORLG00000012975	ENSORLG00000012998
Chinese medaka	MODERN SPECIES	680																ENSOSIG00000023089 #22	ENSOSIG00000023092	sirt5 (ENSOSIG00000023103)	adcy1a (ENSOSIG00000023112)	igfbp1a (ENSOSIG00000023116)	igfbp3 (ENSOSIG00000023117)	ENSOSIG00000023120	ENSOSIG00000023160	si:ch211-191a24.4 (ENSOSIG00000023292)	si:ch211-191a24.4 (ENSOSIG00000023295)	C8orf82 (ENSOSIG00000023297)	naprt (ENSOSIG00000023307)	ENSOSIG00000023319	ENSOSIG00000023324	ENSOSIG00000023326	ADCYAP1R1 (ENSOSIG00000023358)
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Cichlidae	ANCESTRAL SPECIES	42	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a
Pseudocrenilabrinae	DUPLICATION
Pseudocrenilabrinae	ANCESTRAL SPECIES	23	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573.yb.b.b	ENSGT00940000154573.yb.a.b.b	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747	ENSGT00940000161068
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00940000154573.yb.b.a	ENSGT00940000154573.yb.a.b.a.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747	ENSGT00940000161068
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00940000154573.yb.b.a	ENSGT00940000154573.yb.a.b.a.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747	ENSGT00940000161068
Burton s mouthbrooder	MODERN SPECIES	490	ENSHBUG00000022506	ENSHBUG00000022523	SERPINB1 (ENSHBUG00000001180)	MYLK4 (ENSHBUG00000022590)	ENSHBUG00000022610	foxc1b (ENSHBUG00000022633)	ENSHBUG00000022637	foxq1b (ENSHBUG00000022645)	exoc2 (ENSHBUG00000022713)	ENSHBUG00000022769	ENSHBUG00000022786	BPHL (ENSHBUG00000022800)	ENSHBUG00000022808	SLC22A23 (ENSHBUG00000022880)	ENSHBUG00000022900 #22	ENSHBUG00000022924 #22	tbc1d7 (ENSHBUG00000022963)	PHACTR1 (ENSHBUG00000022990)	sirt5 (ENSHBUG00000023019)	adcy1a (ENSHBUG00000023136)	igfbp1a (ENSHBUG00000023183)	igfbp3 (ENSHBUG00000023215)	TNS3 (ENSHBUG00000023241)	ENSHBUG00000023248	si:ch211-191a24.4 (ENSHBUG00000023263)
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00940000154573.yb.b.a	ENSGT00940000154573.yb.a.b.a.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747	ENSGT00940000161068
P. nyererei	DUPLICATION
P. nyererei	MODERN SPECIES	46																ENSPNYG00000023970 #22	tbc1d7 (ENSPNYG00000023969)
P. nyererei	MODERN SPECIES	47																ENSPNYG00000023973 #22	tbc1d7 (ENSPNYG00000023972)
Haplochromini_B	ANCESTRAL SPECIES	32	ENSGT00940000154573.yb.a.b.a.b.b.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT01080000257342.B.a.a.a.b.c.d.b	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747	ENSGT00940000161068
Eastern happy	MODERN SPECIES	8	SERPINB1 (ENSACLG00000024535)	SERPINB1 (ENSACLG00000024514)	MYLK4 (ENSACLG00000024435)	gmds (ENSACLG00000024376)	foxc1b (ENSACLG00000024364)	ENSACLG00000024354	foxq1b (ENSACLG00000024112)	ENSACLG00000024108	exoc2 (ENSACLG00000024009)	ENSACLG00000023960	ENSACLG00000023947	BPHL (ENSACLG00000023944)	ENSACLG00000023933	SLC22A23 (ENSACLG00000023860)	ENSACLG00000023829 #22	ENSACLG00000023812 #22	tbc1d7 (ENSACLG00000023761)	PHACTR1 (ENSACLG00000023700)	sirt5 (ENSACLG00000023663)	adcy1a (ENSACLG00000023601)	igfbp1a (ENSACLG00000023581)	igfbp3 (ENSACLG00000023551)	TNS3 (ENSACLG00000023517)	ENSACLG00000023423	si:ch211-191a24.4 (ENSACLG00000023414)	si:ch211-191a24.4 (ENSACLG00000023407)	ENSACLG00000023401	ENSACLG00000023393	gpx7 (ENSACLG00000023387)	TUT4 (ENSACLG00000023312)	RHPN1 (ENSACLG00000023228)
Zebra mbuna	MODERN SPECIES	1099	ENSMZEG00005016893	SERPINB1 (ENSMZEG00005016896)	SERPINB1 (ENSMZEG00005016910)	MYLK4 (ENSMZEG00005016960)	gmds (ENSMZEG00005016991)	foxc1b (ENSMZEG00005016999)	ENSMZEG00005017002	foxq1b (ENSMZEG00005017006)	ENSMZEG00005017015	exoc2 (ENSMZEG00005017029)	ENSMZEG00005017044	ENSMZEG00005017049	BPHL (ENSMZEG00005017057)	ENSMZEG00005017070	SLC22A23 (ENSMZEG00005017077)	DSP (ENSMZEG00005017105) #22	tbc1d7 (ENSMZEG00005017131)	PHACTR1 (ENSMZEG00005017142)	sirt5 (ENSMZEG00005017157)	adcy1a (ENSMZEG00005017164)	igfbp1a (ENSMZEG00005017173)	igfbp3 (ENSMZEG00005017178)	ENSMZEG00005017185	ENSMZEG00005017190	si:ch211-191a24.4 (ENSMZEG00005017198)	ENSMZEG00005017201	ENSMZEG00005017213	gpx7 (ENSMZEG00005017219)	TUT4 (ENSMZEG00005017227)	RHPN1 (ENSMZEG00005017252)	atpaf1 (ENSMZEG00005017278)
Lyretail cichlid	MODERN SPECIES	343	SERPINB1 (ENSNBRG00000022502)	ENSNBRG00000022544	ENSNBRG00000022554	SERPINB1 (ENSNBRG00000022566)	MYLK4 (ENSNBRG00000022616)	gmds (ENSNBRG00000022664)	foxc1b (ENSNBRG00000022674)	ENSNBRG00000022684	foxq1b (ENSNBRG00000022694)	exoc2 (ENSNBRG00000022700)	ENSNBRG00000022711	ENSNBRG00000022723	BPHL (ENSNBRG00000022743)	ENSNBRG00000022752	SLC22A23 (ENSNBRG00000022757)	DSP (ENSNBRG00000022809) #22	tbc1d7 (ENSNBRG00000022945)	PHACTR1 (ENSNBRG00000022970)	sirt5 (ENSNBRG00000022992)	adcy1a (ENSNBRG00000023019)	igfbp1a (ENSNBRG00000023043)	igfbp3 (ENSNBRG00000023059)	ENSNBRG00000023090	ENSNBRG00000023139	si:ch211-191a24.4 (ENSNBRG00000023194)
Nile tilapia	MODERN SPECIES	8	SERPINB1 (ENSONIG00000011009)	ENSONIG00000029522	ENSONIG00000039945	ENSONIG00000006413	MYLK4 (ENSONIG00000006411)	gmds (ENSONIG00000006408)	foxc1b (ENSONIG00000028353)	ENSONIG00000006406	foxq1b (ENSONIG00000006405)	exoc2 (ENSONIG00000006399)	ENSONIG00000006398	ENSONIG00000028306	BPHL (ENSONIG00000006393)	ENSONIG00000038919	SLC22A23 (ENSONIG00000006392)	DSP (ENSONIG00000006386) #22	tbc1d7 (ENSONIG00000006383)	PHACTR1 (ENSONIG00000006382)	sirt5 (ENSONIG00000006380)	adcy1a (ENSONIG00000006373)	igfbp1a (ENSONIG00000006369)	igfbp3 (ENSONIG00000006363)	TNS3 (ENSONIG00000006355)	ENSONIG00000006349	si:ch211-191a24.4 (ENSONIG00000006348)	ENSONIG00000028199	ENSONIG00000035526	ENSONIG00000030658	gpx7 (ENSONIG00000030415)	TUT4 (ENSONIG00000019455)	ENSONIG00000033113
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT00940000154843.F.c.b.d #22
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	10	ENSGT00390000004681.a.a	ENSGT00940000154573.yb.b.a	ENSGT00940000154573.yb.a.b.a.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747
Haplochromini	ANCESTRAL SPECIES	9	ENSGT00390000004681.a.a	ENSGT00940000154573.yb.b.a	ENSGT00940000154573.yb.a.b.a.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747
Burton s mouthbrooder	MODERN SPECIES	490	ENSHBUG00000000686	ENSHBUG00000022506	ENSHBUG00000022523	SERPINB1 (ENSHBUG00000001180)	MYLK4 (ENSHBUG00000022590)	ENSHBUG00000022610	foxc1b (ENSHBUG00000022633)	ENSHBUG00000022637	foxq1b (ENSHBUG00000022645)	exoc2 (ENSHBUG00000022713)	ENSHBUG00000022769	ENSHBUG00000022786	BPHL (ENSHBUG00000022800)	ENSHBUG00000022808	SLC22A23 (ENSHBUG00000022880)	ENSHBUG00000022900 #22	ENSHBUG00000022924 #22	tbc1d7 (ENSHBUG00000022963)	PHACTR1 (ENSHBUG00000022990)	sirt5 (ENSHBUG00000023019)	adcy1a (ENSHBUG00000023136)	igfbp1a (ENSHBUG00000023183)	igfbp3 (ENSHBUG00000023215)	TNS3 (ENSHBUG00000023241)	ENSHBUG00000023248	si:ch211-191a24.4 (ENSHBUG00000023263)
Haplochromini_A	ANCESTRAL SPECIES	9	ENSGT00390000004681.a.a	ENSGT00940000154573.yb.b.a	ENSGT00940000154573.yb.a.b.a.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747
P. nyererei	MODERN SPECIES	637											ENSPNYG00000023783	ENSPNYG00000023780	BPHL (ENSPNYG00000023778)	ENSPNYG00000023776	SLC22A23 (ENSPNYG00000023774)	DSP (ENSPNYG00000023770) #22	PHACTR1 (ENSPNYG00000023767)	sirt5 (ENSPNYG00000023766)	adcy1a (ENSPNYG00000023763)	igfbp1a (ENSPNYG00000023761)	igfbp3 (ENSPNYG00000023759)	TNS3 (ENSPNYG00000023753)	ENSPNYG00000023750	si:ch211-191a24.4 (ENSPNYG00000023747)
Haplochromini_B	ANCESTRAL SPECIES	32	ENSGT00940000154573.yb.a.b.a.b.a	ENSGT00940000154573.yb.a.b.a.b.b.a	ENSGT00940000154573.yb.a.a	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT01080000257342.B.a.a.a.b.c.d.b	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b.d #22	ENSGT00940000154843.F.c.b.c #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00940000159127	ENSGT00940000156988	ENSGT00940000153837.a.a	ENSGT00390000012765	ENSGT00940000162747
Eastern happy	MODERN SPECIES	8	ENSACLG00000024553	SERPINB1 (ENSACLG00000024535)	SERPINB1 (ENSACLG00000024514)	MYLK4 (ENSACLG00000024435)	gmds (ENSACLG00000024376)	foxc1b (ENSACLG00000024364)	ENSACLG00000024354	foxq1b (ENSACLG00000024112)	ENSACLG00000024108	exoc2 (ENSACLG00000024009)	ENSACLG00000023960	ENSACLG00000023947	BPHL (ENSACLG00000023944)	ENSACLG00000023933	SLC22A23 (ENSACLG00000023860)	ENSACLG00000023829 #22	ENSACLG00000023812 #22	tbc1d7 (ENSACLG00000023761)	PHACTR1 (ENSACLG00000023700)	sirt5 (ENSACLG00000023663)	adcy1a (ENSACLG00000023601)	igfbp1a (ENSACLG00000023581)	igfbp3 (ENSACLG00000023551)	TNS3 (ENSACLG00000023517)	ENSACLG00000023423	si:ch211-191a24.4 (ENSACLG00000023414)	si:ch211-191a24.4 (ENSACLG00000023407)	ENSACLG00000023401	ENSACLG00000023393	gpx7 (ENSACLG00000023387)	TUT4 (ENSACLG00000023312)
Midas cichlid	MODERN SPECIES	1114	ENSACIG00000011026	SERPINB4 (ENSACIG00000011045)	SERPINB1 (ENSACIG00000011072)	SERPINB1 (ENSACIG00000011094)	MYLK4 (ENSACIG00000011155)	gmds (ENSACIG00000011185)	foxc1b (ENSACIG00000011245)	ENSACIG00000011257	foxq1b (ENSACIG00000011267)	exoc2 (ENSACIG00000011279)	ENSACIG00000011331	ENSACIG00000011351	BPHL (ENSACIG00000011400)	ENSACIG00000011426	SLC22A23 (ENSACIG00000011445)	DSP (ENSACIG00000011497) #22	tbc1d7 (ENSACIG00000011735)	PHACTR1 (ENSACIG00000011754)	sirt5 (ENSACIG00000011788)	adcy1a (ENSACIG00000011899)	igfbp1a (ENSACIG00000011966)	igfbp3 (ENSACIG00000012343)	ENSACIG00000012374	ENSACIG00000012457	si:ch211-191a24.4 (ENSACIG00000012534)	CARTPT (ENSACIG00000012539)	ENSACIG00000012552	ENSACIG00000012569	ENSACIG00000012583	ENSACIG00000012651	ENSACIG00000012660
Pomacentridae	ANCESTRAL SPECIES	16	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a
Pomacentridae_A	ANCESTRAL SPECIES		ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573.tb	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.b.b.b	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a
Amphiprion	ANCESTRAL SPECIES	146	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573.tb	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s.f	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.b.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a
Clown anemonefish	MODERN SPECIES	1023													BPHL (ENSAOCG00000017682)	ENSAOCG00000017723	SLC22A23 (ENSAOCG00000017768)	DSP (ENSAOCG00000002733) #22	tbc1d7 (ENSAOCG00000017986)	PHACTR1 (ENSAOCG00000018006)	sirt5 (ENSAOCG00000018042)	adcy1a (ENSAOCG00000018109)	igfbp1a (ENSAOCG00000018113)	igfbp3 (ENSAOCG00000018148)	ENSAOCG00000018168	ENSAOCG00000018200	ENSAOCG00000018216	si:ch211-191a24.4 (ENSAOCG00000018222)
Spiny chromis	MODERN SPECIES	625								ENSAPOG00000008865	foxq1b (ENSAPOG00000000842)	exoc2 (ENSAPOG00000008845)	ENSAPOG00000008760	ENSAPOG00000008729	BPHL (ENSAPOG00000008702)	SLC22A23 (ENSAPOG00000008683)	ENSAPOG00000008625	DSP (ENSAPOG00000008615) #22	tbc1d7 (ENSAPOG00000008500)	PHACTR1 (ENSAPOG00000008461)	sirt5 (ENSAPOG00000008406)
Bicolor damselfish	MODERN SPECIES	354	pycr3 (ENSSPAG00000016938)	bmb (ENSSPAG00000016905)	gfus.1 (ENSSPAG00000016890)	serpinb1 (ENSSPAG00000016873)	MYLK4 (ENSSPAG00000016833)	gmds (ENSSPAG00000016786)	foxc1b (ENSSPAG00000016777)	ENSSPAG00000016763	foxq1b (ENSSPAG00000016754)	exoc2 (ENSSPAG00000016643)	ENSSPAG00000016600	ENSSPAG00000016578	BPHL (ENSSPAG00000016548)	ENSSPAG00000016539	SLC22A23 (ENSSPAG00000016496)	DSP (ENSSPAG00000016460) #22	tbc1d7 (ENSSPAG00000016428)	PHACTR1 (ENSSPAG00000016385)	sirt5 (ENSSPAG00000016358)	ENSSPAG00000016349	adcy1a (ENSSPAG00000016302)
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Carangaria	ANCESTRAL SPECIES	7	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Seriola	ANCESTRAL SPECIES		ENSGT00530000063632.A	ENSGT00940000158851	ENSGT00940000156259.a.a	ENSGT00940000155705.b	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000159127	ENSGT00940000156988
Yellowtail amberjack	MODERN SPECIES	3176	TSPAN1 (ENSSLDG00000014946)	ENSSLDG00000014960	PIK3R3 (ENSSLDG00000014985)	MAST2 (ENSSLDG00000015050)	MYLK4 (ENSSLDG00000015108)	gmds (ENSSLDG00000015151)	foxc1b (ENSSLDG00000015167)	ENSSLDG00000015177	foxq1b (ENSSLDG00000015188)	exoc2 (ENSSLDG00000015217)	ENSSLDG00000015333	ENSSLDG00000015352	BPHL (ENSSLDG00000015369)	ENSSLDG00000015388	SLC22A23 (ENSSLDG00000015405)	DSP (ENSSLDG00000015480) #22	tbc1d7 (ENSSLDG00000015642)	PHACTR1 (ENSSLDG00000015677)	sirt5 (ENSSLDG00000015716)	adcy1a (ENSSLDG00000015738)	igfbp1a (ENSSLDG00000015772)	igfbp3 (ENSSLDG00000015792)	TNS3 (ENSSLDG00000015818)	ENSSLDG00000015837	si:ch211-191a24.4 (ENSSLDG00000015849)	C8orf82 (ENSSLDG00000015856)	naprt (ENSSLDG00000015903)	ENSSLDG00000015993	ENSSLDG00000016038	gpx7 (ENSSLDG00000016054)	TUT4 (ENSSLDG00000016071)
Greater amberjack	MODERN SPECIES	73	TSPAN1 (ENSSDUG00000001125)	PIK3R3 (ENSSDUG00000001043)	MAST2 (ENSSDUG00000000980)	ENSSDUG00000000951	MYLK4 (ENSSDUG00000000930)	gmds (ENSSDUG00000000876)	foxc1b (ENSSDUG00000000846)	ENSSDUG00000000837	foxq1b (ENSSDUG00000000820)	exoc2 (ENSSDUG00000000681)	ENSSDUG00000000649	ENSSDUG00000000584	BPHL (ENSSDUG00000000555)	ENSSDUG00000000544	SLC22A23 (ENSSDUG00000000487)	DSP (ENSSDUG00000000464) #22	tbc1d7 (ENSSDUG00000000427)	PHACTR1 (ENSSDUG00000000362)	sirt5 (ENSSDUG00000000312)	adcy1a (ENSSDUG00000000215)	igfbp1a (ENSSDUG00000000206)	igfbp3 (ENSSDUG00000000190)	ENSSDUG00000000161	ENSSDUG00000000156	si:ch211-191a24.4 (ENSSDUG00000000139)	C8orf82 (ENSSDUG00000000071)	naprt (ENSSDUG00000022027)	ENSSDUG00000021971	ENSSDUG00000021954	gpx7 (ENSSDUG00000021949)	ENSSDUG00000021945
Barramundi perch	MODERN SPECIES	118	pycr3 (ENSLCAG00010022281)	bmb (ENSLCAG00010022274)	GFUS (ENSLCAG00010022240)	serpinb1 (ENSLCAG00010022152)	MYLK4 (ENSLCAG00010022127)	gmds (ENSLCAG00010022113)	foxc1b (ENSLCAG00010022108)	ENSLCAG00010022104	foxq1b (ENSLCAG00010022101)	exoc2 (ENSLCAG00010022058)	ENSLCAG00010022023	ENSLCAG00010022017	BPHL (ENSLCAG00010022012)	ENSLCAG00010022010	SLC22A23 (ENSLCAG00010022003)	ENSLCAG00010021993 #22	tbc1d7 (ENSLCAG00010021990)	PHACTR1 (ENSLCAG00010021985)	sirt5 (ENSLCAG00010021977)	adcy1a (ENSLCAG00010021961)	igfbp1a (ENSLCAG00010021944)	igfbp3 (ENSLCAG00010021938)	TNS3 (ENSLCAG00010021933)	ENSLCAG00010021870	si:ch211-191a24.4 (ENSLCAG00010021848)	C8orf82 (ENSLCAG00010021844)	naprt (ENSLCAG00010021814)	ENSLCAG00010021749	ENSLCAG00010021746	ENSLCAG00010021740	ADCYAP1R1 (ENSLCAG00010021708)
Pleuronectoidei	ANCESTRAL SPECIES	20	ENSGT00950000183014.f.b.b.a.a	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000157362.d	ENSGT00940000166873
Turbot	MODERN SPECIES	3	ENSSMAG00000018009	ENSSMAG00000031375	GFUS (ENSSMAG00000017998)	serpinb1 (ENSSMAG00000017962)	ENSSMAG00000017949	gmds (ENSSMAG00000017919)	ENSSMAG00000017900	foxq1b (ENSSMAG00000027273)	ENSSMAG00000016245	exoc2 (ENSSMAG00000017457)	ENSSMAG00000017427	ENSSMAG00000023258	ENSSMAG00000017405	ENSSMAG00000025427	ENSSMAG00000017342	ENSSMAG00000017286 #22	ENSSMAG00000017243	ENSSMAG00000017238	sirt5 (ENSSMAG00000017195)	adcy1a (ENSSMAG00000016820)	igfbp1a (ENSSMAG00000016813)	igfbp3 (ENSSMAG00000016647)	TNS3 (ENSSMAG00000016625)	ENSSMAG00000033570	si:ch211-191a24.4 (ENSSMAG00000016596)	ENSSMAG00000029722	ENSSMAG00000016583	ENSSMAG00000016442	ENSSMAG00000016417	ENSSMAG00000016396	ENSSMAG00000016363
Tongue sole	MODERN SPECIES	11	SZT2 (ENSCSEG00000002054)	ENSCSEG00000002077	DDX10 (ENSCSEG00000002080)	ENSCSEG00000002082	ENSCSEG00000002086	ENSCSEG00000002098	cdh2 (ENSCSEG00000002100)	ENSCSEG00000002118	ENSCSEG00000002167	ENSCSEG00000002178	ttr (ENSCSEG00000002182)	b4galt6 (ENSCSEG00000002190)	BPHL (ENSCSEG00000002210)	ENSCSEG00000002216	SLC22A23 (ENSCSEG00000002224)	DSP (ENSCSEG00000002245) #22	tbc1d7 (ENSCSEG00000002278)	PHACTR1 (ENSCSEG00000002267)	sirt5 (ENSCSEG00000002284)	adcy1a (ENSCSEG00000002324)	igfbp1a (ENSCSEG00000002342)	igfbp3 (ENSCSEG00000002345)	TNS3 (ENSCSEG00000002350)	ENSCSEG00000002372	si:ch211-191a24.4 (ENSCSEG00000002379)	C8orf82 (ENSCSEG00000002381)	naprt (ENSCSEG00000002384)	rgs8 (ENSCSEG00000002391)	rgs16 (ENSCSEG00000002403)	rgs5a (ENSCSEG00000002407)	rgs4 (ENSCSEG00000002417)
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Climbing perch	MODERN SPECIES	17	ENSATEG00000001642	ENSATEG00000001649	GFUS (ENSATEG00000001658)	serpinb1 (ENSATEG00000001710)	MYLK4 (ENSATEG00000001723)	gmds (ENSATEG00000001738)	foxc1b (ENSATEG00000001744)	ENSATEG00000001750	foxq1b (ENSATEG00000001758)	exoc2 (ENSATEG00000001786)	ENSATEG00000001930	ENSATEG00000001975	ENSATEG00000002027	ENSATEG00000002034	ENSATEG00000002063	ENSATEG00000002096 #22	ENSATEG00000002108	ENSATEG00000002115	ENSATEG00000025672	sirt5 (ENSATEG00000002168)	adcy1a (ENSATEG00000002179)	igfbp1a (ENSATEG00000002248)	igfbp3 (ENSATEG00000002286)	TNS3 (ENSATEG00000002291)	ENSATEG00000002401	si:ch211-191a24.4 (ENSATEG00000002409)	ENSATEG00000002442	ENSATEG00000002466	ENSATEG00000002589	ENSATEG00000002700	ENSATEG00000002933
Siamese fighting fish	MODERN SPECIES	15	pycr3 (ENSBSLG00000013948)	bmb (ENSBSLG00000013956)	gfus.1 (ENSBSLG00000013970)	SERPINB1 (ENSBSLG00000014017)	MYLK4 (ENSBSLG00000014022)	gmds (ENSBSLG00000014100)	foxc1b (ENSBSLG00000014330)	ENSBSLG00000014341	foxq1b (ENSBSLG00000014349)	exoc2 (ENSBSLG00000014365)	ENSBSLG00000014531	ENSBSLG00000014535	BPHL (ENSBSLG00000014545)	ENSBSLG00000014550	SLC22A23 (ENSBSLG00000014560)	ENSBSLG00000014567 #22	tbc1d7 (ENSBSLG00000014591)	PHACTR1 (ENSBSLG00000014597)	ENSBSLG00000014894	adcy1a (ENSBSLG00000014899)	igfbp1a (ENSBSLG00000015053)	ENSBSLG00000015081	igfbp3 (ENSBSLG00000015083)	igfbp3 (ENSBSLG00000015089)	ENSBSLG00000015094	ENSBSLG00000015098	ENSBSLG00000015111	si:ch211-191a24.4 (ENSBSLG00000015690)	C8orf82 (ENSBSLG00000015694)	ADCYAP1R1 (ENSBSLG00000016036)	ENSBSLG00000016111
Zig-zag eel	MODERN SPECIES	18	ENSMAMG00000013588	ENSMAMG00000013609	GFUS (ENSMAMG00000013637)	ENSMAMG00000027981	serpinb1 (ENSMAMG00000013675)	MYLK4 (ENSMAMG00000013690)	gmds (ENSMAMG00000013750)	foxc1b (ENSMAMG00000013760)	ENSMAMG00000013780	foxq1b (ENSMAMG00000013785)	exoc2 (ENSMAMG00000013802)	ENSMAMG00000013921	ENSMAMG00000013948	ENSMAMG00000013959	ENSMAMG00000014012	ENSMAMG00000014043 #22	ENSMAMG00000014057	ENSMAMG00000028147	sirt5 (ENSMAMG00000014096)	adcy1a (ENSMAMG00000014223)	igfbp1a (ENSMAMG00000014282)	igfbp3 (ENSMAMG00000014314)	TNS3 (ENSMAMG00000014334)	ENSMAMG00000014357	ENSMAMG00000024348	si:ch211-191a24.4 (ENSMAMG00000014382)	ENSMAMG00000014388	ENSMAMG00000014400	ENSMAMG00000014434	ENSMAMG00000014576	ENSMAMG00000014625
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00940000155117.f.a	ENSGT00940000154967.b.a	ENSGT00940000154386	ENSGT00560000077332	ENSGT00390000004554.`b.a.b	ENSGT00950000182976.b.a	ENSGT00950000182913.B.f	ENSGT00940000164186.a	ENSGT00950000183047.c.b	ENSGT00940000154130.a.a.b	ENSGT01070000253867.b	ENSGT00390000015458	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000163886.A	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000164676	ENSGT00940000157362.d	ENSGT00940000166873	ENSGT00940000164912
Tetraodon	MODERN SPECIES		ENSTNIG00000012331	ENSTNIG00000012332	aspm (ENSTNIG00000012330)	ENSTNIG00000012329	ENSTNIG00000012328	depdc1a (ENSTNIG00000012327)	rpe65c (ENSTNIG00000012326)	si:ch211-198n5.11 (ENSTNIG00000012325)	fnbp1l (ENSTNIG00000012324)	bcar3 (ENSTNIG00000012323)	ENSTNIG00000012322	hps3 (ENSTNIG00000012321)	ENSTNIG00000012320	BPHL (ENSTNIG00000012319)	SLC22A23 (ENSTNIG00000012318)	DSP (ENSTNIG00000012317) #22	tbc1d7 (ENSTNIG00000012316)	PHACTR1 (ENSTNIG00000012315)	sirt5 (ENSTNIG00000012314)	adcy1a (ENSTNIG00000006449)	igfbp1a (ENSTNIG00000000228)	igfbp3 (ENSTNIG00000006450)	TNS3 (ENSTNIG00000006451)	ENSTNIG00000006232	si:ch211-191a24.4 (ENSTNIG00000006233)	C8orf82 (ENSTNIG00000006234)	ENSTNIG00000006235	ADCYAP1R1 (ENSTNIG00000006236)	ENSTNIG00000006237	ENSTNIG00000004322	ENSTNIG00000004750
Fugu	MODERN SPECIES	12	ENSTRUG00000028091	ENSTRUG00000032747	ENSTRUG00000017411	prkcz (ENSTRUG00000029784)	skia (ENSTRUG00000032329)	ENSTRUG00000033499	ENSTRUG00000031401	ENSTRUG00000026747	pex10 (ENSTRUG00000027916)	stx6 (ENSTRUG00000031208)	ENSTRUG00000028047	hps3 (ENSTRUG00000027581)	ENSTRUG00000004265	ENSTRUG00000026039	SLC22A23 (ENSTRUG00000004085)	ENSTRUG00000004870 #22	tbc1d7 (ENSTRUG00000005401)	PHACTR1 (ENSTRUG00000028501)	ENSTRUG00000023182	naprt (ENSTRUG00000032926)	ENSTRUG00000033295	si:ch211-191a24.4 (ENSTRUG00000026923)	ENSTRUG00000026459	ENSTRUG00000031521	igfbp3 (ENSTRUG00000030362)	ENSTRUG00000032500	igfbp3 (ENSTRUG00000027998)	ENSTRUG00000031212	ENSTRUG00000028125	ENSTRUG00000003325	si:ch211-191a24.4 (ENSTRUG00000026613)
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Ballan wrasse	MODERN SPECIES	13					SERPINB1 (ENSLBEG00000024576)	MYLK4 (ENSLBEG00000024598)	gmds (ENSLBEG00000024651)	foxc1b (ENSLBEG00000024692)	ENSLBEG00000024715	exoc2 (ENSLBEG00000024747)	ENSLBEG00000024781	ENSLBEG00000024809	BPHL (ENSLBEG00000024842)	ENSLBEG00000024857	SLC22A23 (ENSLBEG00000024883)	DSP (ENSLBEG00000025091) #22	tbc1d7 (ENSLBEG00000025427)	PHACTR1 (ENSLBEG00000025468)	sirt5 (ENSLBEG00000025501)	adcy1a (ENSLBEG00000025537)	igfbp1a (ENSLBEG00000025619)	igfbp3 (ENSLBEG00000025636)	TNS3 (ENSLBEG00000025682)	ENSLBEG00000025765	si:ch211-191a24.4 (ENSLBEG00000025783)	si:ch1073-287p18.1 (ENSLBEG00000025791)	naprt (ENSLBEG00000025810)	ENSLBEG00000025872	ENSLBEG00000025955	ENSLBEG00000025980	ENSLBEG00000026051
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Perciformes	ANCESTRAL SPECIES	8	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Pike perch	MODERN SPECIES	59	pycr3 (ENSSLUG00000010455)	bmb (ENSSLUG00000010448)	GFUS (ENSSLUG00000010245)	serpinb1 (ENSSLUG00000010225)	MYLK4 (ENSSLUG00000010214)	gmds (ENSSLUG00000010158)	foxc1b (ENSSLUG00000010148)	ENSSLUG00000010147	foxq1b (ENSSLUG00000010140)	exoc2 (ENSSLUG00000010077)	ENSSLUG00000010042	ENSSLUG00000010024	BPHL (ENSSLUG00000010013)	ENSSLUG00000010011	SLC22A23 (ENSSLUG00000010001)	DSP (ENSSLUG00000009955) #22	tbc1d7 (ENSSLUG00000009934)	PHACTR1 (ENSSLUG00000009924)	sirt5 (ENSSLUG00000009911)	adcy1a (ENSSLUG00000009905)	igfbp1a (ENSSLUG00000009898)	igfbp3 (ENSSLUG00000009894)	ENSSLUG00000009891	ENSSLUG00000009367	si:ch211-191a24.4 (ENSSLUG00000009339)	C8orf82 (ENSSLUG00000009335)	naprt (ENSSLUG00000008976)	ENSSLUG00000007697	ENSSLUG00000007603	ENSSLUG00000007579	ENSSLUG00000007573
Channel bull blenny	MODERN SPECIES	18	bmb (ENSCGOG00000008036)	GFUS (ENSCGOG00000007969)	ENSCGOG00000007966	MYLK4 (ENSCGOG00000007958)	ENSCGOG00000007953	gmds (ENSCGOG00000007884)	foxc1b (ENSCGOG00000007881)	ENSCGOG00000007879	foxq1b (ENSCGOG00000007876)	exoc2 (ENSCGOG00000006386)	ENSCGOG00000006333	ENSCGOG00000006329	BPHL (ENSCGOG00000006325)	ENSCGOG00000006323	SLC22A23 (ENSCGOG00000006288)	DSP (ENSCGOG00000006277) #22	tbc1d7 (ENSCGOG00000006253)	PHACTR1 (ENSCGOG00000006215)	sirt5 (ENSCGOG00000006155)	adcy1a (ENSCGOG00000006036)	igfbp1a (ENSCGOG00000006030)	igfbp3 (ENSCGOG00000006029)	ENSCGOG00000006026	ENSCGOG00000005626	si:ch211-191a24.4 (ENSCGOG00000005621)	C8orf82 (ENSCGOG00000005620)	naprt (ENSCGOG00000005481)	ENSCGOG00000002922	ENSCGOG00000002745	ENSCGOG00000002605	ENSCGOG00000002352
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00950000183014.f.b.b.a.a	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT01030000234528.B.b.b.bb.a	ENSGT00940000157362.d
Lumpfish	MODERN SPECIES	19	ENSCLMG00005016841	pycr3 (ENSCLMG00005016842)	bmb (ENSCLMG00005016946)	GFUS (ENSCLMG00005016950)	serpinb1 (ENSCLMG00005016998)	gmds (ENSCLMG00005017009)	foxc1b (ENSCLMG00005017906)	ENSCLMG00005017908	foxq1b (ENSCLMG00005017909)	exoc2 (ENSCLMG00005017916)	ENSCLMG00005017950	ENSCLMG00005017953	BPHL (ENSCLMG00005017955)	ENSCLMG00005018008	SLC22A23 (ENSCLMG00005018012)	DSP (ENSCLMG00005018027) #22	tbc1d7 (ENSCLMG00005018070)	ENSCLMG00005018071	sirt5 (ENSCLMG00005018073)	adcy1a (ENSCLMG00005018074)	ENSCLMG00005018076	igfbp1a (ENSCLMG00005018077)	igfbp3 (ENSCLMG00005018078)	ENSCLMG00005018079	ENSCLMG00005018088	si:ch211-191a24.4 (ENSCLMG00005018119)	C8orf82 (ENSCLMG00005018120)	naprt (ENSCLMG00005018123)	ENSCLMG00005018141	ENSCLMG00005018724	ENSCLMG00005018733
Stickleback	MODERN SPECIES	8	niban1a (ENSGACG00000005076)	TRMT1L (ENSGACG00000005050)	ENSGACG00000005049	MYLK4 (ENSGACG00000005039)	ENSGACG00000005035	gmds (ENSGACG00000005020)	foxc1b (ENSGACG00000005016)	ENSGACG00000005011	foxq1b (ENSGACG00000005009)	exoc2 (ENSGACG00000004977)	ENSGACG00000004966	ENSGACG00000004962	BPHL (ENSGACG00000004957)	ENSGACG00000004955	SLC22A23 (ENSGACG00000004947)	DSP (ENSGACG00000004923) #22	tbc1d7 (ENSGACG00000004896)	PHACTR1 (ENSGACG00000004884)	sirt5 (ENSGACG00000004877)	adcy1a (ENSGACG00000004858)	igfbp1a (ENSGACG00000004848)	igfbp3 (ENSGACG00000004842)	TNS3 (ENSGACG00000004812)	ENSGACG00000004794	si:ch211-191a24.4 (ENSGACG00000004788)	C8orf82 (ENSGACG00000004782)	naprt (ENSGACG00000004712)	ENSGACG00000004688	ENSGACG00000004671	hdlbpa (ENSGACG00000004648)	FARP2 (ENSGACG00000004623)
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
Gilthead seabream	MODERN SPECIES	2	NOS1AP (ENSSAUG00010012501)	ENSSAUG00010012506	pycr3 (ENSSAUG00010012510)	bmb (ENSSAUG00010012513)	GFUS (ENSSAUG00010012522)	serpinb1 (ENSSAUG00010013106)	gmds (ENSSAUG00010013107)	foxc1b (ENSSAUG00010013109)	ENSSAUG00010013110	foxq1b (ENSSAUG00010013112)	exoc2 (ENSSAUG00010013119)	ENSSAUG00010013134	DUSP22 (ENSSAUG00010013140)	BPHL (ENSSAUG00010013142)	SLC22A23 (ENSSAUG00010013143)	ENSSAUG00010013153 #22	tbc1d7 (ENSSAUG00010013932)	PHACTR1 (ENSSAUG00010013943)	ENSSAUG00010013953	sirt5 (ENSSAUG00010013959)	adcy1a (ENSSAUG00010014004)	igfbp1a (ENSSAUG00010014351)	igfbp3 (ENSSAUG00010014354)	ENSSAUG00010014357	TNS3 (ENSSAUG00010014361)	ENSSAUG00010014383	si:ch211-191a24.4 (ENSSAUG00010014938)	C8orf82 (ENSSAUG00010014940)	naprt (ENSSAUG00010014942)	ENSSAUG00010015000	ENSSAUG00010016581
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00950000183044.a.b	ENSGT00740000115898	ENSGT00390000004681.a.a	ENSGT00940000154573	ENSGT00940000156211.a.a	ENSGT00440000033640.h.b	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000155265.b.b.a	ENSGT00940000155265.b.b.b	ENSGT01030000234528.B.b.b.bb.a
European seabass	MODERN SPECIES	17	ENSDLAG00005016026	ENSDLAG00005032974	ENSDLAG00005015968	GFUS (ENSDLAG00005015658)	serpinb1 (ENSDLAG00005015625)	MYLK4 (ENSDLAG00005015580)	gmds (ENSDLAG00005015474)	foxc1b (ENSDLAG00005026999)	ENSDLAG00005015450	foxq1b (ENSDLAG00005026408)	exoc2 (ENSDLAG00005015259)	ENSDLAG00005015248	ENSDLAG00005028053	ENSDLAG00005030830	ENSDLAG00005028299	ENSDLAG00005014837 #22	ENSDLAG00005014814	ENSDLAG00005027314	ENSDLAG00005014725	sirt5 (ENSDLAG00005014707)	adcy1a (ENSDLAG00005014071)	igfbp1a (ENSDLAG00005014009)	igfbp3 (ENSDLAG00005027811)	TNS3 (ENSDLAG00005013907)	ENSDLAG00005013750	si:ch211-191a24.4 (ENSDLAG00005033040)	ENSDLAG00005013574	ENSDLAG00005010794	ENSDLAG00005010698	ENSDLAG00005010653	ENSDLAG00005027136
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005011342	pycr3 (ENSLCRG00005011338)	bmb (ENSLCRG00005011333)	ENSLCRG00005011279	MYLK4 (ENSLCRG00005011276)	gmds (ENSLCRG00005011216)	foxc1b (ENSLCRG00005011211)	ENSLCRG00005011210	foxq1b (ENSLCRG00005011207)	exoc2 (ENSLCRG00005011191)	ENSLCRG00005011181	ENSLCRG00005011179	ENSLCRG00005011177	ENSLCRG00005011175	SLC22A23 (ENSLCRG00005011172)	DSP (ENSLCRG00005011160) #22	tbc1d7 (ENSLCRG00005011152)	PHACTR1 (ENSLCRG00005011145)	sirt5 (ENSLCRG00005011141)	adcy1a (ENSLCRG00005011033)	igfbp1a (ENSLCRG00005011030)	igfbp3 (ENSLCRG00005011029)	ENSLCRG00005011027	ENSLCRG00005010988	ENSLCRG00005010985	si:ch211-191a24.4 (ENSLCRG00005010982)	C8orf82 (ENSLCRG00005010981)	naprt (ENSLCRG00005010977)	ENSLCRG00005010272	bcar3 (ENSLCRG00005010041)	fnbp1l (ENSLCRG00005008845)
Tiger tail seahorse	MODERN SPECIES	65	EPS15L1 (ENSHCOG00000009026)	rad23ab (ENSHCOG00000008982)	ENSHCOG00000008974	serpinb1 (ENSHCOG00000008969)	MYLK4 (ENSHCOG00000008962)	gmds (ENSHCOG00000008941)	foxc1b (ENSHCOG00000008915)	ENSHCOG00000008894	foxq1b (ENSHCOG00000008887)	exoc2 (ENSHCOG00000008869)	ENSHCOG00000008786	BPHL (ENSHCOG00000008754)	ENSHCOG00000008744	ENSHCOG00000008719	SLC22A23 (ENSHCOG00000008707)	DSP (ENSHCOG00000008603) #22	tbc1d7 (ENSHCOG00000008279)	PHACTR1 (ENSHCOG00000008261)	sirt5 (ENSHCOG00000008235)	adcy1a (ENSHCOG00000008214)	igfbp1a (ENSHCOG00000008177)	igfbp3 (ENSHCOG00000008170)	ENSHCOG00000008160	ENSHCOG00000008149	C8orf82 (ENSHCOG00000008140)	si:ch211-191a24.4 (ENSHCOG00000008119)	NOS1AP (ENSHCOG00000008113)	ENSHCOG00000008097	rgs4 (ENSHCOG00000008074)	rgs5a (ENSHCOG00000007997)
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	18	bmb (ENSMMDG00005014575)	GFUS (ENSMMDG00005014534)	serpinb1 (ENSMMDG00005014528)	MYLK4 (ENSMMDG00005014524)	gmds (ENSMMDG00005014457)	foxc1b (ENSMMDG00005014449)	ENSMMDG00005014447	foxq1b (ENSMMDG00005014444)	exoc2 (ENSMMDG00005014357)	ENSMMDG00005014344	DUSP22 (ENSMMDG00005014340)	BPHL (ENSMMDG00005014337)	ENSMMDG00005014335	SLC22A23 (ENSMMDG00005014331)	ENSMMDG00005014320 #22	ENSMMDG00005014313 #22	tbc1d7 (ENSMMDG00005014308)	PHACTR1 (ENSMMDG00005014293)	sirt5 (ENSMMDG00005014270)	adcy1a (ENSMMDG00005014255)	igfbp1a (ENSMMDG00005014247)	igfbp3 (ENSMMDG00005014244)	ENSMMDG00005014239	ENSMMDG00005013983	si:ch211-191a24.4 (ENSMMDG00005013972)	C8orf82 (ENSMMDG00005013971)	naprt (ENSMMDG00005013881)	ENSMMDG00005013864	ENSMMDG00005013861	ENSMMDG00005013809	ENSMMDG00005013655
Pinecone sodierfish	MODERN SPECIES	18	pycr3 (ENSMMDG00005014576)	bmb (ENSMMDG00005014575)	GFUS (ENSMMDG00005014534)	serpinb1 (ENSMMDG00005014528)	MYLK4 (ENSMMDG00005014524)	gmds (ENSMMDG00005014457)	foxc1b (ENSMMDG00005014449)	ENSMMDG00005014447	foxq1b (ENSMMDG00005014444)	exoc2 (ENSMMDG00005014357)	ENSMMDG00005014344	DUSP22 (ENSMMDG00005014340)	BPHL (ENSMMDG00005014337)	ENSMMDG00005014335	SLC22A23 (ENSMMDG00005014331)	ENSMMDG00005014320 #22	ENSMMDG00005014313 #22	tbc1d7 (ENSMMDG00005014308)	PHACTR1 (ENSMMDG00005014293)	sirt5 (ENSMMDG00005014270)	adcy1a (ENSMMDG00005014255)	igfbp1a (ENSMMDG00005014247)	igfbp3 (ENSMMDG00005014244)	ENSMMDG00005014239	ENSMMDG00005013983	si:ch211-191a24.4 (ENSMMDG00005013972)	C8orf82 (ENSMMDG00005013971)	naprt (ENSMMDG00005013881)	ENSMMDG00005013864	ENSMMDG00005013861	ENSMMDG00005013809
Cod	MODERN SPECIES	3	serpinb1 (ENSGMOG00000013968)	ENSGMOG00000023052	MYLK4 (ENSGMOG00000017147)	ENSGMOG00000025150	ENSGMOG00000017124	gmds (ENSGMOG00000017103)	foxc1b (ENSGMOG00000017090)	ENSGMOG00000017082	foxq1b (ENSGMOG00000035151)	exoc2 (ENSGMOG00000017001)	ENSGMOG00000016994	ENSGMOG00000016977	ENSGMOG00000016965	ENSGMOG00000016961	ENSGMOG00000016938	ENSGMOG00000016860 #22	ENSGMOG00000027937	ENSGMOG00000016845	ENSGMOG00000023853	ENSGMOG00000033977	ENSGMOG00000024356	sirt5 (ENSGMOG00000016809)	adcy1a (ENSGMOG00000016776)	igfbp1a (ENSGMOG00000016764)	igfbp3 (ENSGMOG00000016754)	ENSGMOG00000016701	ENSGMOG00000026229	ENSGMOG00000027728	ENSGMOG00000035400	si:dkey-239i20.4 (ENSGMOG00000019652)	ENSGMOG00000019649
Protacanthopterygii	ANCESTRAL SPECIES	30	ENSGT00950000183044.a.b	ENSGT01060000252363	ENSGT00940000154573.db	ENSGT00940000156211.a.a	ENSGT00440000033640.h	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00940000157153.x	ENSGT00390000004746	ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a	ENSGT00940000162747	ENSGT00940000161068
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	104					ENSGT00940000156211.a.a.b	ENSGT00440000033640.h.d	ENSGT00940000162303.a.a.c	ENSGT00940000163866.a.b.a	ENSGT00940000162937.a.a.a	ENSGT00390000010872.m	ENSGT00940000166222.b	ENSGT00390000004746	ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b	ENSGT00940000167364.d	ENSGT00940000157354.i.c	ENSGT00940000154843.F.c.b.g #22	ENSGT00940000155842.s.c	ENSGT00940000156080.l.f	ENSGT00940000154872.B.e	ENSGT00940000157394.a.a	ENSGT00940000158092.o.e	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a.b	ENSGT00940000162747.f	ENSGT00940000161068	ENSGT00970000194629	ENSGT00940000164912
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT00740000115898	ENSGT00950000183044.a.b	ENSGT00950000183014.f.b.b.a.a.g	ENSGT00940000154573.db.a	ENSGT00940000156211.a.a.b	ENSGT00440000033640.h.d	ENSGT00940000162303.a.a.c	ENSGT00940000163866.a.b.a	ENSGT00940000162937.a.a.a	ENSGT00390000010872.m	ENSGT00940000166222.b	ENSGT00390000004746	ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b	ENSGT00940000167364.d	ENSGT00940000157354.i.c	ENSGT00940000154843.F.c.b.g #22	ENSGT00940000155842.s.c	ENSGT00940000156080.l.f	ENSGT00940000154872.B.e	ENSGT00940000157394.a.a	ENSGT00940000158092.o.e	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a.b	ENSGT00940000162747.f	ENSGT00940000161068.e	ENSGT00940000164912
Salmo	ANCESTRAL SPECIES	14	ENSGT00740000115898	ENSGT00950000183044.a.b	ENSGT00950000183014.f.b.b.a.a.g	ENSGT00940000154573.db.a	ENSGT00940000156211.a.a.b	ENSGT00440000033640.h.d	ENSGT00940000162303.a.a.c	ENSGT00940000163866.a.b.a	ENSGT00940000162937.a.a.a	ENSGT00390000010872.m	ENSGT00940000166222.b	ENSGT00390000004746	ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b	ENSGT00940000167364.d	ENSGT00940000157354.i.c	ENSGT00940000154843.F.c.b.g #22	ENSGT00390000009122.e	ENSGT00940000155842.s.c	ENSGT00940000156080.l.f	ENSGT00940000154872.B.e	ENSGT00940000157394.a.a	ENSGT00940000158092.o.e	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a.b	ENSGT00940000162747.f	ENSGT00940000161068.e
Atlantic salmon	MODERN SPECIES	1	ENSSSAG00000080945	ENSSSAG00000006996	pycrl (ENSSSAG00000007006)	ENSSSAG00000007023	ENSSSAG00000007035	MYLK4 (ENSSSAG00000007045)	gmds (ENSSSAG00000007080)	foxc1b (ENSSSAG00000113293)	ENSSSAG00000007409	foxq1b (ENSSSAG00000118532)	exoc2 (ENSSSAG00000007450)	ENSSSAG00000009083	ENSSSAG00000089628	ENSSSAG00000106162	ENSSSAG00000009155	ENSSSAG00000009331 #22	ENSSSAG00000010363	ENSSSAG00000012469	sirt5 (ENSSSAG00000046369)	ENSSSAG00000102460	adcy1a (ENSSSAG00000010309)	igfbp3 (ENSSSAG00000012642)	igfbp1a (ENSSSAG00000012288)	ENSSSAG00000013054	ENSSSAG00000015452	ENSSSAG00000120505	ENSSSAG00000115641	ENSSSAG00000039337	ENSSSAG00000040024	RHPN1 (ENSSSAG00000043337)	mafaa (ENSSSAG00000121304)
River trout	MODERN SPECIES	14	pycr3 (ENSSTUG00000011685)	ENSSTUG00000011722	SERPINB1 (ENSSTUG00000011763)	MYLK4 (ENSSTUG00000011780)	ENSSTUG00000011810	foxc1b (ENSSTUG00000011822)	ENSSTUG00000011826	foxq1b (ENSSTUG00000011830)	exoc2 (ENSSTUG00000011842)	ENSSTUG00000012003	BPHL (ENSSTUG00000012027)	ENSSTUG00000012033	ENSSTUG00000012036	SLC22A23 (ENSSTUG00000012055)	ENSSTUG00000012105	DSP (ENSSTUG00000012156) #22	ENSSTUG00000013449	tbc1d7 (ENSSTUG00000013458)	PHACTR1 (ENSSTUG00000013632)	sirt5 (ENSSTUG00000013652)	adcy1a (ENSSTUG00000013684)	igfbp1a (ENSSTUG00000013976)	igfbp3 (ENSSTUG00000013984)	ENSSTUG00000013995	ENSSTUG00000014021	ENSSTUG00000029800	naprt (ENSSTUG00000029822)	ENSSTUG00000029932	RHPN1 (ENSSTUG00000031404)	mafaa (ENSSTUG00000032079)	ENSSTUG00000032084
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00740000115898	ENSGT00950000183044.a.b	ENSGT01060000252363	ENSGT00940000154573.db.a	ENSGT00940000156211.a.a.b	ENSGT00440000033640.h.d	ENSGT00940000162303.a.a.c	ENSGT00940000163866.a.b.a	ENSGT00940000162937.a.a.a	ENSGT00390000010872.m	ENSGT00940000166222.b	ENSGT00390000004746	ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b	ENSGT00940000167364.d	ENSGT00940000157354.i.c	ENSGT00940000154843.F.c.b.g #22	ENSGT00940000155842.s.c	ENSGT00940000156080.l.f	ENSGT00940000154872.B.e	ENSGT00940000157394.a.a	ENSGT00940000158092.o.e	ENSGT00940000156328.a.b.a	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a.b	ENSGT00940000162747.f	ENSGT00940000161068.e	ENSGT00940000164912
Rainbow trout	MODERN SPECIES	26	pycr3 (ENSOMYG00000034461)	ENSOMYG00000057579	ENSOMYG00000034489	ENSOMYG00000034537	ENSOMYG00000067598	foxc1b (ENSOMYG00000034587)	ENSOMYG00000034595	foxq1b (ENSOMYG00000075977)	exoc2 (ENSOMYG00000034717)	ENSOMYG00000034883	ENSOMYG00000071598	ENSOMYG00000076665	ENSOMYG00000034889	ENSOMYG00000034896	ENSOMYG00000034913	ENSOMYG00000034985 #22	ENSOMYG00000057669	ENSOMYG00000035115	sirt5 (ENSOMYG00000035167)	adcy1a (ENSOMYG00000075471)	ENSOMYG00000035179	igfbp1a (ENSOMYG00000033353)	igfbp3 (ENSOMYG00000035202)	ENSOMYG00000076200	TNS3 (ENSOMYG00000035233)	ENSOMYG00000055966	si:ch211-191a24.4 (ENSOMYG00000035310)	ENSOMYG00000035322	ENSOMYG00000073443	ENSOMYG00000035390	ENSOMYG00000072179
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00740000115898	ENSGT00950000183044.a.b	ENSGT01060000252363	ENSGT00940000154573.db.a	ENSGT00940000156211.a.a.b	ENSGT00440000033640.h.d	ENSGT00940000162303.a.a.c	ENSGT00940000163866.a.b.a	ENSGT00940000162937.a.a.a	ENSGT00390000010872.m	ENSGT00940000166222.b	ENSGT00390000004746	ENSGT01100000263520.a.a.a.a.b.b.a.a.b.e.b	ENSGT00940000167364.d	ENSGT00940000157354.i.c	ENSGT00940000154843.F.c.b.g #22	ENSGT00940000155842.s.c	ENSGT00940000156080.l.f	ENSGT00940000154872.B.e	ENSGT00940000157394.a.a	ENSGT00940000158092.o.e	ENSGT00940000158137.c.b	ENSGT00950000183102.A.b.a	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000164676	ENSGT00940000153837.a.a.b	ENSGT00940000162747.f	ENSGT00940000161068.e	ENSGT00940000164912	ENSGT00940000166873.e
Coho salmon	MODERN SPECIES	4	bmb (ENSOKIG00005029642)	pycr3 (ENSOKIG00005029624)	ENSOKIG00005029601	SERPINB1 (ENSOKIG00005029582)	MYLK4 (ENSOKIG00005029507)	gmds (ENSOKIG00005029460)	foxc1b (ENSOKIG00005029445)	ENSOKIG00005029436	foxq1b (ENSOKIG00005029424)	exoc2 (ENSOKIG00005029268)	ENSOKIG00005029205	BPHL (ENSOKIG00005029195)	ENSOKIG00005029186	ENSOKIG00005029169	SLC22A23 (ENSOKIG00005029160)	DSP (ENSOKIG00005027735) #22	PHACTR1 (ENSOKIG00005027576)	sirt5 (ENSOKIG00005027471)	adcy1a (ENSOKIG00005027036)	igfbp1a (ENSOKIG00005026979)	igfbp3 (ENSOKIG00005026948)	ENSOKIG00005026941	TNS3 (ENSOKIG00005026887)	ENSOKIG00005026006	si:ch211-191a24.4 (ENSOKIG00005025923)	C8orf82 (ENSOKIG00005025918)	naprt (ENSOKIG00005025831)	ENSOKIG00005023541	RHPN1 (ENSOKIG00005023317)	mafaa (ENSOKIG00005023305)	ZC3H3 (ENSOKIG00005023270)
Chinook salmon	MODERN SPECIES	29	mcm3l (ENSOTSG00005011938)	ENSOTSG00005013978	bmb (ENSOTSG00005013986)	pycr3 (ENSOTSG00005013987)	ENSOTSG00005013988	SERPINB1 (ENSOTSG00005013989)	gmds (ENSOTSG00005013991)	foxc1b (ENSOTSG00005013992)	ENSOTSG00005013993	exoc2 (ENSOTSG00005013998)	ENSOTSG00005014054	BPHL (ENSOTSG00005014056)	ENSOTSG00005014059	ENSOTSG00005014061	SLC22A23 (ENSOTSG00005014063)	DSP (ENSOTSG00005014075) #22	PHACTR1 (ENSOTSG00005014628)	ENSOTSG00005014633	ENSOTSG00005014634	igfbp1a (ENSOTSG00005014637)	igfbp3 (ENSOTSG00005014639)	ENSOTSG00005014641	ENSOTSG00005014643	ENSOTSG00005014645	si:ch211-191a24.4 (ENSOTSG00005014649)	C8orf82 (ENSOTSG00005014651)	naprt (ENSOTSG00005014656)	ENSOTSG00005014941	RHPN1 (ENSOTSG00005017160)	mafaa (ENSOTSG00005019378)	ENSOTSG00005019379
Huchen	MODERN SPECIES	696					gmds (ENSHHUG00000044663)	foxc1b (ENSHHUG00000044660)	ENSHHUG00000044657	foxq1b (ENSHHUG00000044653)	exoc2 (ENSHHUG00000044563)	ENSHHUG00000044555	ENSHHUG00000044550	BPHL (ENSHHUG00000044529)	ENSHHUG00000044524	ENSHHUG00000044520	SLC22A23 (ENSHHUG00000044504)	DSP (ENSHHUG00000044413) #22	PHACTR1 (ENSHHUG00000044394)	sirt5 (ENSHHUG00000044384)
Salmoninae	ANCESTRAL SPECIES	398		ENSGT00390000003161.c	ENSGT00390000004681.a.a.h	ENSGT00950000183014.f.b.b.a.a.h	ENSGT00940000154573.db.b	ENSGT00940000156211.a.a.a	ENSGT00440000033640.h.c	ENSGT00940000162303.a.a.d	ENSGT00940000163866.a.b.b	ENSGT00940000162937.a.a.b	ENSGT00390000010872.n	ENSGT00940000166222.a	ENSGT00940000157153.x	ENSGT00940000167364.c	ENSGT00940000157354.i.d	ENSGT00940000154843.F.c.b.h #22	ENSGT00390000009122	ENSGT00940000155842.s.d	ENSGT00940000156080.l.e	ENSGT00940000154872.B.f	ENSGT00940000157394.a.b	ENSGT00940000158092.o.f	ENSGT00940000156328.a.b.a	ENSGT00940000153837.a.a.a	ENSGT00940000162747.e	ENSGT00940000166873.f	ENSGT00950000182879.a.b.b	ENSGT00940000156988.i
Salmoninae_a	ANCESTRAL SPECIES	46	ENSGT00950000182909.b.a.a.db.c	ENSGT00390000003161.c	ENSGT00390000004681.a.a.h	ENSGT00950000183014.f.b.b.a.a.h	ENSGT00940000154573.db.b	ENSGT00940000156211.a.a.a	ENSGT00440000033640.h.c	ENSGT00940000162303.a.a.d	ENSGT00940000163866.a.b.b	ENSGT00940000162937.a.a.b	ENSGT00390000010872.n	ENSGT00940000166222.a	ENSGT00940000157153.x	ENSGT00940000167364.c	ENSGT00940000157354.i.d	ENSGT00940000154843.F.c.b.h #22	ENSGT00390000009122	ENSGT00940000155842.s.d	ENSGT00940000156080.l.e	ENSGT00940000154872.B.f	ENSGT00940000157394.a.b	ENSGT00940000158092.o.f	ENSGT00940000156328.a.b.b.a.a	ENSGT00940000153837.a.a.a	ENSGT00940000162747.e	ENSGT00940000161068.f	ENSGT00940000166873.f	ENSGT00950000182879.a.b.b	ENSGT00940000156988.i	ENSGT00940000160740.f	ENSGT00940000154327.b.f.d
Salmo	ANCESTRAL SPECIES	20	ENSGT00950000182909.b.a.a.db.c	ENSGT00390000003161.c	ENSGT00390000004681.a.a.h	ENSGT00950000183014.f.b.b.a.a.h	ENSGT00940000154573.db.b	ENSGT00940000156211.a.a.a	ENSGT00440000033640.h.c	ENSGT00940000162303.a.a.d	ENSGT00940000163866.a.b.b	ENSGT00940000162937.a.a.b	ENSGT00390000010872.n	ENSGT00940000166222.a	ENSGT00940000157153.x	ENSGT00940000167364.c	ENSGT00940000157354.i.d	ENSGT00940000154843.F.c.b.h #22	ENSGT00390000009122.f	ENSGT00940000155842.s.d	ENSGT00940000156080.l.e	ENSGT00940000154872.B.f	ENSGT00940000157394.a.b	ENSGT00940000158092.o.f	ENSGT00940000156328.a.b.b.a.a	ENSGT00940000153837.a.a.a	ENSGT00940000162747.e	ENSGT00940000161068.f	ENSGT00940000166873.f	ENSGT00950000182879.a.b.b	ENSGT00940000156988.i	ENSGT00940000160740.f	ENSGT00940000154327.b.f.d
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000041824	rn138 (ENSSSAG00000041661)	ENSSSAG00000041538	ENSSSAG00000040457	ENSSSAG00000040228	ENSSSAG00000040373	ENSSSAG00000040154	ENSSSAG00000082157	foxc1b (ENSSSAG00000040140)	ENSSSAG00000040106	foxq1b (ENSSSAG00000089918)	exoc2 (ENSSSAG00000039795)	irf4l (ENSSSAG00000039730)	ENSSSAG00000039637	ENSSSAG00000090100	ENSSSAG00000014553 #22	tbc1d7 (ENSSSAG00000013056)	ENSSSAG00000118698	sirt5 (ENSSSAG00000011739)	adcy1a (ENSSSAG00000010506)	igfbp1a (ENSSSAG00000010236)	igfbp3 (ENSSSAG00000116052)	ENSSSAG00000112797	RHPN1 (ENSSSAG00000010178)	ENSSSAG00000111841	ZC3H3 (ENSSSAG00000010148)	ENSSSAG00000113270	ENSSSAG00000010109	ENSSSAG00000009753	ENSSSAG00000009691	ENSSSAG00000103073
River trout	MODERN SPECIES	33	ENSSTUG00000002113	ARHGAP39 (ENSSTUG00000002087)	GFUS (ENSSTUG00000001584)	ENSSTUG00000001505	SERPINB1 (ENSSTUG00000001469)	MYLK4 (ENSSTUG00000001452)	gmds (ENSSTUG00000001437)	foxc1b (ENSSTUG00000001435)	ENSSTUG00000001433	foxq1b (ENSSTUG00000001420)	exoc2 (ENSSTUG00000001320)	ENSSTUG00000001284	ENSSTUG00000001274	ENSSTUG00000001269	SLC22A23 (ENSSTUG00000001261)	DSP (ENSSTUG00000000382) #22	tbc1d7 (ENSSTUG00000000317)	PHACTR1 (ENSSTUG00000000308)	sirt5 (ENSSTUG00000000298)	adcy1a (ENSSTUG00000000255)	igfbp1a (ENSSTUG00000000230)	igfbp3 (ENSSTUG00000000220)	ENSSTUG00000000215	ENSSTUG00000000207	RHPN1 (ENSSTUG00000000186)	mafaa (ENSSTUG00000000182)	ZC3H3 (ENSSTUG00000000171)	ENSSTUG00000016937	cyp2p6 (ENSSTUG00000016912)	ENSSTUG00000015959	PODN (ENSSTUG00000015912)
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00950000182909.b.a.a.db.c	ENSGT00390000003161.c	ENSGT00390000004681.a.a.h	ENSGT00950000183014.f.b.b.a.a.h	ENSGT00940000154573.db.b	ENSGT00940000156211.a.a.a	ENSGT00440000033640.h.c	ENSGT00940000162303.a.a.d	ENSGT00940000163866.a.b.b	ENSGT00940000162937.a.a.b	ENSGT00390000010872.n	ENSGT00940000166222.a	ENSGT00940000157153.x	ENSGT00940000167364.c	ENSGT00940000157354.i.d	ENSGT00940000154843.F.c.b.h #22	ENSGT00390000009122	ENSGT00940000155842.s.d	ENSGT00940000156080.l.e	ENSGT00940000154872.B.f	ENSGT00940000157394.a.b	ENSGT00940000158092.o.f	ENSGT00940000153837.a.a.a	ENSGT00940000162747.e	ENSGT00940000161068.f	ENSGT00940000166873.f	ENSGT00950000182879.a.b.b	ENSGT00940000156988.i	ENSGT00940000160740.f	ENSGT00940000154327.b.f.d	ENSGT00390000003156.b.e
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00950000182909.b.a.a.db.c	ENSGT00390000003161.c	ENSGT00390000004681.a.a.h	ENSGT00950000183014.f.b.b.a.a.h	ENSGT00940000154573.db.b	ENSGT00940000156211.a.a.a	ENSGT00440000033640.h.c	ENSGT00940000162303.a.a.d	ENSGT00940000163866.a.b.b	ENSGT00940000162937.a.a.b	ENSGT00390000010872.n	ENSGT00940000166222.a	ENSGT00940000157153.x	ENSGT00940000167364.c	ENSGT00940000157354.i.d	ENSGT00940000154843.F.c.b.h #22	ENSGT00390000009122	ENSGT00940000155842.s.d	ENSGT00940000156080.l.e	ENSGT00940000154872.B.f	ENSGT00940000157394.a.b	ENSGT00940000158092.o.f	ENSGT00940000156328.a.b.a	ENSGT00940000153837.a.a.a	ENSGT00940000162747.e	ENSGT00940000161068.f	ENSGT00940000166873.f	ENSGT00950000182879.a.b.b	ENSGT00940000156988.i	ENSGT00940000160740.f	ENSGT00940000154327.b.f.d
Chinook salmon	MODERN SPECIES		b4galt6 (ENSOTSG00005047623)	TRAPPC8 (ENSOTSG00005047631)	ENSOTSG00005047633	GFUS (ENSOTSG00005047635)	ENSOTSG00005047651	SERPINB1 (ENSOTSG00005047652)	ENSOTSG00005047653	foxc1b (ENSOTSG00005000065)	ENSOTSG00005000104	foxq1b (ENSOTSG00005000166)	exoc2 (ENSOTSG00005000187)	ENSOTSG00005000193	ENSOTSG00005000196	ENSOTSG00005000197	SLC22A23 (ENSOTSG00005000199)	DSP (ENSOTSG00005000216) #22	tbc1d7 (ENSOTSG00005000619)	ENSOTSG00005000625	sirt5 (ENSOTSG00005000631)	igfbp1a (ENSOTSG00005000638)	ENSOTSG00005000643	igfbp3 (ENSOTSG00005000646)	RHPN1 (ENSOTSG00005000675)	mafaa (ENSOTSG00005001545)	ZC3H3 (ENSOTSG00005001547)	ENSOTSG00005001548	cyp2p6 (ENSOTSG00005001551)	TUT4 (ENSOTSG00005001603)	PODN (ENSOTSG00005008779)	scp2b (ENSOTSG00005008781)	magoh (ENSOTSG00005008783)
Coho salmon	MODERN SPECIES	1	ARHGAP39 (ENSOKIG00005024242)	GFUS (ENSOKIG00005024330)	ENSOKIG00005024387	SERPINB1 (ENSOKIG00005024415)	MYLK4 (ENSOKIG00005024435)	gmds (ENSOKIG00005024457)	ENSOKIG00005024584	foxc1b (ENSOKIG00005024591)	ENSOKIG00005024594	foxq1b (ENSOKIG00005024601)	exoc2 (ENSOKIG00005024662)	ENSOKIG00005024821	ENSOKIG00005024838	ENSOKIG00005024843	SLC22A23 (ENSOKIG00005024852)	DSP (ENSOKIG00005024957) #22	tbc1d7 (ENSOKIG00005027178)	PHACTR1 (ENSOKIG00005027204)	sirt5 (ENSOKIG00005027246)	ENSOKIG00005027284	igfbp1a (ENSOKIG00005027314)	igfbp3 (ENSOKIG00005027341)	ENSOKIG00005027349	RHPN1 (ENSOKIG00005027393)	mafaa (ENSOKIG00005027898)	ZC3H3 (ENSOKIG00005027903)	ENSOKIG00005027923	cyp2p6 (ENSOKIG00005027996)	TUT4 (ENSOKIG00005028082)	PODN (ENSOKIG00005028507)	ENSOKIG00005028525
Rainbow trout	MODERN SPECIES	22	ENSOMYG00000032556	ENSOMYG00000032568	MYLK4 (ENSOMYG00000032600)	gmds (ENSOMYG00000032624)	foxc1b (ENSOMYG00000032661)	ENSOMYG00000077565	ENSOMYG00000032667	foxq1b (ENSOMYG00000032675)	exoc2 (ENSOMYG00000032814)	ENSOMYG00000032871	ENSOMYG00000068692	ENSOMYG00000052262	ENSOMYG00000032902	ENSOMYG00000032912	ENSOMYG00000067978	ENSOMYG00000033066 #22	ENSOMYG00000033135	ENSOMYG00000033220	sirt5 (ENSOMYG00000048136)	ENSOMYG00000033343	ENSOMYG00000072071	ENSOMYG00000071385	igfbp1a (ENSOMYG00000056582)	igfbp3 (ENSOMYG00000033369)	ENSOMYG00000053389	RHPN1 (ENSOMYG00000033419)	mafaa (ENSOMYG00000053094)	ZC3H3 (ENSOMYG00000033628)	ENSOMYG00000033635	ENSOMYG00000033651	ENSOMYG00000033780
Huchen	MODERN SPECIES	258																DSP (ENSHHUG00000042270) #22	tbc1d7 (ENSHHUG00000042390)	ENSHHUG00000042399	sirt5 (ENSHHUG00000042432)	igfbp1a (ENSHHUG00000042446)	igfbp3 (ENSHHUG00000042482)	ENSHHUG00000042485	RHPN1 (ENSHHUG00000042511)	mafaa (ENSHHUG00000042532)	ENSHHUG00000042535	ENSHHUG00000042555	ENSHHUG00000042597	ENSHHUG00000042606
Northern pike	MODERN SPECIES	7	cahz (ENSELUG00000002055)	serpinb1 (ENSELUG00000002049)	MYLK4 (ENSELUG00000002040)	gmds (ENSELUG00000002034)	ENSELUG00000033999	foxc1b (ENSELUG00000002021)	ENSELUG00000002020	foxq1b (ENSELUG00000001117)	exoc2 (ENSELUG00000002012)	ENSELUG00000001984	ENSELUG00000001975	BPHL (ENSELUG00000001972)	ENSELUG00000001968	ENSELUG00000001962	SLC22A23 (ENSELUG00000001966)	DSP (ENSELUG00000001958) #22	tbc1d7 (ENSELUG00000001946)	PHACTR1 (ENSELUG00000001941)	sirt5 (ENSELUG00000001938)	adcy1a (ENSELUG00000001934)	igfbp3 (ENSELUG00000001928)	igfbp1a (ENSELUG00000001925)	ENSELUG00000001917	ENSELUG00000001891	si:ch211-191a24.4 (ENSELUG00000001540)	C8orf82 (ENSELUG00000024516)	naprt (ENSELUG00000024499)	ENSELUG00000024485	RHPN1 (ENSELUG00000024408)	mafaa (ENSELUG00000024290)	ZC3H3 (ENSELUG00000024269)
Otomorpha	ANCESTRAL SPECIES	220						ENSGT00940000156211.a.a	ENSGT00440000033640	ENSGT00940000162303.a.a	ENSGT00940000163866.a.b	ENSGT00940000162937.a.a	ENSGT00390000010872	ENSGT00940000166222	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b	ENSGT00940000163886.A	ENSGT00950000183102.A.b.a	ENSGT00950000183111.b.a.b	ENSGT00950000182909.b.a.a.db	ENSGT00390000000568	ENSGT01100000263524.B.b.b	ENSGT00940000158019	ENSGT00940000153229.A.a.b	ENSGT01030000234624.b.b.c.a.a
Otophysi	ANCESTRAL SPECIES	16	ENSGT00530000063408.A	ENSGT00940000160723	ENSGT00530000063583.b	ENSGT00950000182962.b.b	ENSGT01060000248564.b.a.a.b	ENSGT00550000074943	ENSGT00940000158349	ENSGT00390000016034	ENSGT00940000166128	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00940000166222.h.b	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.t.x	ENSGT00940000155842.s	ENSGT00940000155265.b.b	ENSGT00940000164218	ENSGT00950000183014.f.b.b.a.b.a	ENSGT00950000183044.a.b	ENSGT00390000004681.b	ENSGT00390000003161	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000153837.a.a	ENSGT00950000183093.C	ENSGT00940000157671	ENSGT00390000011405
Characiphysae	ANCESTRAL SPECIES	31	ENSGT00530000063408.A	ENSGT00940000160723	ENSGT00530000063583.b.n	ENSGT00950000182962.b.b	ENSGT01060000248564.b.a.a.b	ENSGT00550000074943	ENSGT00940000158349	ENSGT00390000016034	ENSGT00940000166128	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00940000166222.h.b	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.t.x	ENSGT00940000155842.s	ENSGT00940000155265.b.b	ENSGT00940000164218.ob.b	ENSGT00950000183014.f.b.b.a.b.a	ENSGT00950000183044.a.b	ENSGT00390000004681.b.c	ENSGT00390000003161	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000153837.a.a	ENSGT00950000183093.C	ENSGT00940000157671	ENSGT00390000011405
Channel catfish	MODERN SPECIES	11	sash1 (ENSIPUG00000005390)	ust (ENSIPUG00000006670)	slc22a16 (ENSIPUG00000006700)	mettl24 (ENSIPUG00000006740)	cdc40 (ENSIPUG00000006762)	wasf1 (ENSIPUG00000006830)	gpr6 (ENSIPUG00000006906)	fig4 (ENSIPUG00000006925)	gata4 (ENSIPUG00000007121)	fdft1 (ENSIPUG00000007144)	ENSIPUG00000007186	ENSIPUG00000007194	ENSIPUG00000007212	psmg4 (ENSIPUG00000007288)	slc22a23 (ENSIPUG00000007236)	DSP (ENSIPUG00000007350) #22	tbc1d7 (ENSIPUG00000007381)	ENSIPUG00000007427	ENSIPUG00000007460	eef1d (ENSIPUG00000007494)	pycrl (ENSIPUG00000007545)	TSTA3 (ENSIPUG00000007564)	arhgap39 (ENSIPUG00000007606)	c2h8orf82 (ENSIPUG00000007667)	PM20D2 (ENSIPUG00000007679)	pnrc1 (ENSIPUG00000007702)	rngtt (ENSIPUG00000007731)	cnr1a (ENSIPUG00000007860)	snx14 (ENSIPUG00000007891)	nt5e (ENSIPUG00000008104)	ENSIPUG00000008152
Characiphysae_b	ANCESTRAL SPECIES	74	ENSGT00530000063408.A	ENSGT00940000160723	ENSGT00390000002881	ENSGT00530000063583.b.n	ENSGT00950000182962.b.b	ENSGT01060000248564.b.a.a.b	ENSGT00550000074943	ENSGT00940000158349	ENSGT00390000016034	ENSGT00940000166128	ENSGT00940000155141.w.a	ENSGT00940000166222.h.b	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.t.x	ENSGT00940000155842.s	ENSGT00940000155265.b.b	ENSGT00940000164218.ob.b	ENSGT00950000183014.f.b.b.a.b.a	ENSGT00950000183044.a.b	ENSGT00390000004681.b.c	ENSGT00390000003161	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000153837.a.a	ENSGT00950000183093.C	ENSGT00940000157671	ENSGT00390000011405
Electric eel	MODERN SPECIES	4				WASF1 (ENSEEEG00000021030)	WASF1 (ENSEEEG00000021029)	GPR6 (ENSEEEG00000021028)	FIG4 (ENSEEEG00000021024)	gata4 (ENSEEEG00000021014)	fdft1 (ENSEEEG00000021012)	ctsbb (ENSEEEG00000020976)	NCOA7 (ENSEEEG00000020948)	ENSEEEG00000020945	BPHL (ENSEEEG00000020944)	ENSEEEG00000020942	SLC22A23 (ENSEEEG00000020940)	DSP (ENSEEEG00000020938) #22	tbc1d7 (ENSEEEG00000020937)	ENSEEEG00000020935	ENSEEEG00000020934	ENSEEEG00000020932	ENSEEEG00000020931	eef1db (ENSEEEG00000020928)	pycr3 (ENSEEEG00000020927)	ENSEEEG00000020924	GFUS (ENSEEEG00000020893)	ARHGAP39 (ENSEEEG00000020876)	C8orf82 (ENSEEEG00000020872)	naprt (ENSEEEG00000020870)	RHPN1 (ENSEEEG00000020866)	hlx1 (ENSEEEG00000020865)	DUSP10 (ENSEEEG00000020864)
Characoidei	ANCESTRAL SPECIES	49	ENSGT00530000063408.A	ENSGT00940000160723	ENSGT00390000002881	ENSGT00530000063583.b.n	ENSGT00950000182962.b.b	ENSGT01060000248564.b.a.a.b	ENSGT00550000074943	ENSGT00940000158349	ENSGT00390000016034	ENSGT00940000166128	ENSGT00940000155141.w.a	ENSGT00940000166222.h.b	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.t.x	ENSGT00940000155842.s	ENSGT00940000155265.b.b	ENSGT00940000164218.ob.b	ENSGT00950000183014.f.b.b.a.b.a	ENSGT00950000183044.a.b	ENSGT00390000004681.b.c	ENSGT00390000003161	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000153837.a.a	ENSGT00950000183093.C	ENSGT00940000157671	ENSGT00390000011405
Red-bellied piranha	MODERN SPECIES	534									WASF1 (ENSPNAG00000007800)	GPR6 (ENSPNAG00000000471)	ENSPNAG00000000478	ENSPNAG00000007815	BPHL (ENSPNAG00000007819)	ENSPNAG00000000496	SLC22A23 (ENSPNAG00000007834)	DSP (ENSPNAG00000006717) #22	tbc1d7 (ENSPNAG00000007869)	ENSPNAG00000007880	ENSPNAG00000007886	ENSPNAG00000007892	ENSPNAG00000007927	eef1db (ENSPNAG00000007955)	pycr3 (ENSPNAG00000000558)	GFUS (ENSPNAG00000007972)	ARHGAP39 (ENSPNAG00000000574)	C8orf82 (ENSPNAG00000000576)	RHPN1 (ENSPNAG00000008008)
Mexicana tetra	MODERN SPECIES	342																ENSAMXG00000042962 #22	tbc1d7 (ENSAMXG00000035166)
Cyprinoidei	ANCESTRAL SPECIES	57	ENSGT00940000158912.i	ENSGT00590000083139.d.b.gb	ENSGT00530000063583.b	ENSGT00950000182962.b.b	ENSGT01060000248564.b.a.a.b	ENSGT00550000074943	ENSGT00940000158349	ENSGT00390000016034	ENSGT00940000166128	ENSGT00390000004746	ENSGT00940000175851	ENSGT00940000155141.w.a	ENSGT00940000166222.h.b	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000155265.b.b	ENSGT00940000164218	ENSGT00950000183014.f.b.b.a.b.a	ENSGT00950000183044.a.b	ENSGT00390000004681.b.f.a	ENSGT00390000004681.b.e	ENSGT00390000003161	ENSGT00390000011521	ENSGT00940000153456.a	ENSGT00940000153837.a.a	ENSGT00950000183093.C	ENSGT00950000182767.a.e	ENSGT00390000016465
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	553			ENSGT00940000158912.i.a	ENSGT00530000063583.b.l	ENSGT00950000182962.b.b.t.b	ENSGT01060000248564.b.a.a.b.e	ENSGT00550000074943	ENSGT00940000158349.m	ENSGT00390000016034.`b.b	ENSGT00940000166128	ENSGT00940000155141.w.a.b	ENSGT00940000166222.h.b.b	ENSGT00390000004746	ENSGT00940000167364.a.b	ENSGT00940000157354.i.e	ENSGT00940000154843.F.c.b.i #22	ENSGT00940000155842.s.g.b	ENSGT00940000155265.b.b	ENSGT00940000164218	ENSGT00950000183014.f.b.b.a.b.a.a.a	ENSGT00390000004681.b.f.a.a
Cyprininae_a	ANCESTRAL SPECIES	392	ENSGT00940000158912.i.a	ENSGT00530000063583.b.l	ENSGT00950000182962.b.b.t.b	ENSGT01060000248564.b.a.a.b.e	ENSGT00550000074943	ENSGT00940000158349.m	ENSGT00390000016034.`b.b	ENSGT00940000166128	ENSGT00390000016034.`b.a	ENSGT00940000175851	ENSGT00940000155141.w.a.b	ENSGT00940000166222.h.b.b	ENSGT00390000004746	ENSGT00940000167364.a.b	ENSGT00940000157354.i.e	ENSGT00940000154843.F.c.b.i #22	ENSGT00940000155842.s.g.b	ENSGT00940000155265.b.b	ENSGT00940000164218	ENSGT00950000183014.f.b.b.a.b.a.a.a	ENSGT00390000004681.b.f.a.a
Common carp reference	MODERN SPECIES	28	myh6 (ENSCCRG00000067645)	slc25a29 (ENSCCRG00000054460)	ENSCCRG00000027356	ENSCCRG00000064295	cdc40 (ENSCCRG00000001583)	WASF1 (ENSCCRG00000069905)	GPR6 (ENSCCRG00000062256)	FIG4 (ENSCCRG00000032517)	gata4 (ENSCCRG00000076261)	ENSCCRG00000047664	ctsbb (ENSCCRG00000047657)	ENSCCRG00000071352	ENSCCRG00000047653	ENSCCRG00000012332	ENSCCRG00000058367	ENSCCRG00000068396 #22	ENSCCRG00000014241	ENSCCRG00000037019	ENSCCRG00000028562	eef1db (ENSCCRG00000028541)	gfus.2 (ENSCCRG00000065131)	gfus.2 (ENSCCRG00000057308)	gfus.1 (ENSCCRG00000053117)	ENSCCRG00000068337	ENSCCRG00000043175	ENSCCRG00000005573	naprt (ENSCCRG00000005559)	hlx1 (ENSCCRG00000005544)	ENSCCRG00000005515	ENSCCRG00000035032	aida (ENSCCRG00000064444)
Golden-line barbel	MODERN SPECIES	586	myh6 (ENSSGRG00000005194)	pak6b (ENSSGRG00000005197)	ENSSGRG00000005200	cdc40 (ENSSGRG00000005208)	WASF1 (ENSSGRG00000005683)	GPR6 (ENSSGRG00000005688)	FIG4 (ENSSGRG00000005693)	gata4 (ENSSGRG00000005704)	fdft1 (ENSSGRG00000005707)	ctsbb (ENSSGRG00000005710)	ENSSGRG00000005712	ENSSGRG00000005718	ENSSGRG00000005721	ENSSGRG00000005723	SLC22A23 (ENSSGRG00000005729)	DSP (ENSSGRG00000005734) #22	ENSSGRG00000005736	ENSSGRG00000005738	ENSSGRG00000005743	eef1db (ENSSGRG00000005744)
Goldfish	MODERN SPECIES	56	PLCB4 (ENSCARG00000043226)	ENSCARG00000043778	PLCB1 (ENSCARG00000044070)	ENSCARG00000047187	cdc40 (ENSCARG00000047255)	WASF1 (ENSCARG00000047518)	GPR6 (ENSCARG00000047528)	FIG4 (ENSCARG00000047664)	gata4 (ENSCARG00000050543)	fdft1 (ENSCARG00000050571)	ctsbb (ENSCARG00000050796)	ENSCARG00000050833	ENSCARG00000050837	ENSCARG00000050863	SLC22A23 (ENSCARG00000050883)	DSP (ENSCARG00000051171) #22	PHACTR1 (ENSCARG00000053926)	ENSCARG00000054072	ENSCARG00000054089	eef1db (ENSCARG00000054102)	gfus.2 (ENSCARG00000054185)	ENSCARG00000054834	ARHGAP39 (ENSCARG00000054840)	ENSCARG00000054873	ENSCARG00000054923	ENSCARG00000054932	znf410 (ENSCARG00000054944)	ENSCARG00000054973	ENSCARG00000054999	yy1b (ENSCARG00000055005)	evlb (ENSCARG00000055055)
Cyprininae	ANCESTRAL SPECIES	206												ENSGT00940000155141.w.a.a	ENSGT00940000166222.h.b.a	ENSGT00940000167364.a.a	ENSGT00940000157354.i.f	ENSGT00940000154843.F.c.b.j #22	ENSGT00390000009122	ENSGT00940000155842.s.g.a	ENSGT00950000183014.f.b.b.a.b.a.a.b	ENSGT00950000183044.a.b	ENSGT00390000004681.b.f.a.b.b	ENSGT00390000004681.b.f.a.b.a	ENSGT00390000004681.b.e	ENSGT00390000003161.f	ENSGT00390000011521	ENSGT00940000153456.a.c	ENSGT00940000153837.a.a	ENSGT00950000183093.C.c	ENSGT00940000157671	ENSGT00390000011405	ENSGT00950000182767.a.e
Cyprininae_a	ANCESTRAL SPECIES	142	ENSGT00940000154482.b.b.a.d.l	ENSGT00940000159694.b	ENSGT00940000157766.b.b.i	ENSGT00940000156528.d.b	ENSGT00940000158912.i.b	ENSGT00590000083139.d.b.gb	ENSGT00390000002881	ENSGT00530000063583.b.k	ENSGT00950000182962.b.b.t.a.a	ENSGT01060000248564.b.a.a.b.f	ENSGT00940000158349.n	ENSGT00940000155141.w.a.a	ENSGT00940000166222.h.b.a	ENSGT00940000167364.a.a	ENSGT00940000157354.i.f	ENSGT00940000154843.F.c.b.j #22	ENSGT00390000009122	ENSGT00940000155842.s.g.a	ENSGT00950000183014.f.b.b.a.b.a.a.b	ENSGT00950000183044.a.b	ENSGT00390000004681.b.f.a.b.b	ENSGT00390000004681.b.f.a.b.a	ENSGT00390000004681.b.e	ENSGT00390000003161.f	ENSGT00390000011521	ENSGT00940000153456.a.c	ENSGT00940000153837.a.a	ENSGT00950000183093.C.c	ENSGT00940000157671.c	ENSGT00940000157671.d	ENSGT00390000011405
Common carp reference	MODERN SPECIES	34	slc25a47a (ENSCCRG00000035676)	slc25a29 (ENSCCRG00000011113)	pak6b (ENSCCRG00000026710)	ENSCCRG00000076315	METTL24 (ENSCCRG00000075264)	ENSCCRG00000080347	cdc40 (ENSCCRG00000019697)	ENSCCRG00000047170	WASF1 (ENSCCRG00000079243)	GPR6 (ENSCCRG00000060730)	ENSCCRG00000072281	ENSCCRG00000047583	ENSCCRG00000047558	ENSCCRG00000057564	ENSCCRG00000054388	ENSCCRG00000058558 #22	tbc1d7 (ENSCCRG00000057167)	ENSCCRG00000055925	eef1db (ENSCCRG00000063093)	pycr3 (ENSCCRG00000073457)	gfus.2 (ENSCCRG00000005640)	ENSCCRG00000082065	ENSCCRG00000055371	naprt (ENSCCRG00000043181)	ENSCCRG00000015417	DUSP10 (ENSCCRG00000054337)	taf1a (ENSCCRG00000005524)	ENSCCRG00000005467	aida (ENSCCRG00000005252)	brox (ENSCCRG00000005244)	ENSCCRG00000073885
Golden-line barbel	MODERN SPECIES	1119																DSP (ENSSGRG00000026787) #22	tbc1d7 (ENSSGRG00000026801)	ENSSGRG00000026811	ENSSGRG00000026814	ENSSGRG00000026815	pycr3 (ENSSGRG00000026816)	gfus.2 (ENSSGRG00000026817)	gfus.2 (ENSSGRG00000026819)	gfus.1 (ENSSGRG00000026821)	C8orf82 (ENSSGRG00000026915)	naprt (ENSSGRG00000026918)	RHPN1 (ENSSGRG00000026992)	hlx1 (ENSSGRG00000027042)
Goldfish	MODERN SPECIES	12	ENSCARG00000058140	trmt6 (ENSCARG00000058163)	ENSCARG00000058379	bmp2b (ENSCARG00000036539)	ENSCARG00000036554	ENSCARG00000036566	RAB10 (ENSCARG00000036574)	lin28b (ENSCARG00000036589)	GPR6 (ENSCARG00000036611)	gata4 (ENSCARG00000036645)	fdft1 (ENSCARG00000036696)	ENSCARG00000037367	ENSCARG00000037403	ENSCARG00000037445	SLC22A23 (ENSCARG00000037457)	DSP (ENSCARG00000037651) #22	tbc1d7 (ENSCARG00000038044)	ENSCARG00000038055	eef1db (ENSCARG00000038077)	pycr3 (ENSCARG00000038108)	gfus.2 (ENSCARG00000038129)	gfus.2 (ENSCARG00000038245)	gfus.1 (ENSCARG00000038297)	ARHGAP39 (ENSCARG00000038967)	C8orf82 (ENSCARG00000039003)	ENSCARG00000039020	RHPN1 (ENSCARG00000039040)	DUSP10 (ENSCARG00000039317)	taf1a (ENSCARG00000039334)	ENSCARG00000039404	aida (ENSCARG00000039492)
Zebrafish	MODERN SPECIES	12	myh6 (ENSDARG00000090637)	pak6b (ENSDARG00000052405)	ENSDARG00000078825	ENSDARG00000075016	METTL24 (ENSDARG00000075817)	cdc40 (ENSDARG00000041226)	WASF1 (ENSDARG00000060349)	GPR6 (ENSDARG00000052400)	ENSDARG00000107912	ENSDARG00000110608	ENSDARG00000110451	ENSDARG00000101118	gata4 (ENSDARG00000098952)	fdft1 (ENSDARG00000101062)	ctsbb (ENSDARG00000101051)	DSP (ENSDARG00000076673) #22	tbc1d7 (ENSDARG00000029581)	phactr1 (ENSDARG00000023916)	ENSDARG00000114229	ENSDARG00000111367	ENSDARG00000095671	ENSDARG00000110807	ENSDARG00000113562	ENSDARG00000115571	ENSDARG00000039652	eef1db (ENSDARG00000030053)	pycr3 (ENSDARG00000015236)	gfus.2 (ENSDARG00000039669)	gfus.1 (ENSDARG00000039666)	ARHGAP39 (ENSDARG00000100007)	si:ch1073-287p18.1 (ENSDARG00000075765)
Clupeiformes	ANCESTRAL SPECIES	260												ENSGT00940000166222	ENSGT00390000004746	ENSGT00940000167364	ENSGT00940000157354.i	ENSGT00940000154843.F.c.b #22	ENSGT00390000009122	ENSGT00940000155842.s	ENSGT00940000156080.l	ENSGT00940000154872.B	ENSGT00940000157394.a	ENSGT00940000158092.o	ENSGT00940000156328.a.b	ENSGT00950000183102.A.b.a	ENSGT01050000244824.B	ENSGT00940000156618.d	ENSGT01030000234597.a.b.a.b	ENSGT00950000183111.b.a.b	ENSGT00950000182909.b.a.a.db	ENSGT00390000000568	ENSGT00940000158019
Denticle herring	MODERN SPECIES	270	aqp4 (ENSDCDG00000014059)	ENSDCDG00000014050	naprt (ENSDCDG00000014019)	C8orf82 (ENSDCDG00000014004)	ARHGAP39 (ENSDCDG00000013984)	GFUS (ENSDCDG00000013848)	pycr3 (ENSDCDG00000013833)	ENSDCDG00000013825	ENSDCDG00000013820	ENSDCDG00000013809	serpinb1l2 (ENSDCDG00000013760)	MYLK4 (ENSDCDG00000013739)	gmds (ENSDCDG00000013723)	ENSDCDG00000013864	ENSDCDG00000013855	ENSDCDG00000013849 #22	tbc1d7 (ENSDCDG00000013823)	ENSDCDG00000013817	TGM1 (ENSDCDG00000013764) ##14	lmx1a (ENSDCDG00000013754)	ENSDCDG00000013750	exoc2 (ENSDCDG00000013742)	ENSDCDG00000013738	ENSDCDG00000013737	ENSDCDG00000013735	ENSDCDG00000013733	ENSDCDG00000013732	tbc1d7 (ENSDCDG00000013730)	TGM1 (ENSDCDG00000013724) ##14	lmx1a (ENSDCDG00000013720)	ENSDCDG00000013352
Atlantic herring	MODERN SPECIES	1	arhgap29b (ENSCHAG00000023629)	RWDD3 (ENSCHAG00000023669)	ptbp2b (ENSCHAG00000023680)	dpydb (ENSCHAG00000023806)	ENSCHAG00000024233	ENSCHAG00000024241	serpinb1 (ENSCHAG00000024258)	MYLK4 (ENSCHAG00000024261)	gmds (ENSCHAG00000024276)	foxq1b (ENSCHAG00000024317)	exoc2 (ENSCHAG00000024323)	ENSCHAG00000024406	BPHL (ENSCHAG00000024409)	ENSCHAG00000024413	ENSCHAG00000024419	DSP (ENSCHAG00000024435) #22	tbc1d7 (ENSCHAG00000024454)	ENSCHAG00000024461	sirt5 (ENSCHAG00000024475)	adcy1a (ENSCHAG00000024527)	igfbp1a (ENSCHAG00000024566)	igfbp3 (ENSCHAG00000024570)	ENSCHAG00000024572	ENSCHAG00000024574	ENSCHAG00000024579	ENSCHAG00000024584	si:ch211-191a24.4 (ENSCHAG00000000324)	mcm3l (ENSCHAG00000000597)	mep1ba (ENSCHAG00000000890)	ENSCHAG00000000954	TRAPPC8 (ENSCHAG00000001395)
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Oryzias	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Oryzias_a	ANCESTRAL SPECIES	18	ENSGT01090000260070.C.b	ENSGT00940000154450.tc	ENSGT00940000164147.b	ENSGT00940000156338.b	ENSGT00390000014274	ENSGT00940000157751	ENSGT00530000063023.A.b	ENSGT00390000007597	ENSGT00950000183145.C	ENSGT00940000160140.a.a	ENSGT00390000011748.ab	ENSGT00390000007776	ENSGT01100000263484.B.b.b.a.a	ENSGT00530000063880.b.e	ENSGT00940000162855.a.a.a.b	ENSGT00940000154843.F.d #22	ENSGT00390000009358	ENSGT00400000024940	ENSGT00390000003774.b	ENSGT00390000003774.a.a.c	ENSGT00940000157616.j.a	ENSGT01000000214440.A.a.b.a.g.a	ENSGT00940000164559.A	ENSGT00940000164926	ENSGT00390000005125	ENSGT00390000014900.a	ENSGT00940000156809.b	ENSGT00940000155168.a.b	ENSGT00940000171014	ENSGT00910000144184	ENSGT00530000063402.a
Japanese Medaka HdrR	MODERN SPECIES	2	srsf10b (ENSORLG00000007691)	ENSORLG00000007702	slc9a1b (ENSORLG00000007714)	ENSORLG00000007724	KDM1B (ENSORLG00000007744)	DPY19L4 (ENSORLG00000007771)	ints8 (ENSORLG00000007855)	ENSORLG00000027329	gdf6b (ENSORLG00000007867)	ENSORLG00000007925	ENY2 (ENSORLG00000030402)	nudcd1 (ENSORLG00000007957)	trhrb (ENSORLG00000029082)	TMEM74 (ENSORLG00000007970)	pleca (ENSORLG00000007995)	ENSORLG00000008003 #22	ENSORLG00000008009	ENSORLG00000026217	slc52a2 (ENSORLG00000008027)	ENSORLG00000008034	nfatc1 (ENSORLG00000008055)	STX12 (ENSORLG00000008076)	ENSORLG00000008080	ENSORLG00000008094	ssr2 (ENSORLG00000023087)	sostdc1b (ENSORLG00000008107)	thrb (ENSORLG00000008122)	nr1d2b (ENSORLG00000024060)	ENSORLG00000008130	ENSORLG00000024501	sf3a3 (ENSORLG00000008175)
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Tetraodontidae	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Tetraodon	MODERN SPECIES	26	ENSTNIG00000002959	VPS52 (ENSTNIG00000002958)	rps18 (ENSTNIG00000002957)	ENSTNIG00000002956	ENSTNIG00000005203	ENSTNIG00000002952	NHERF1 (ENSTNIG00000002951)	ENSTNIG00000002950	adgra2 (ENSTNIG00000002949)	ZNF536 (ENSTNIG00000002948)	ENSTNIG00000002947	rpz4 (ENSTNIG00000019421)	ENSTNIG00000002946	ENSTNIG00000002934	entpd1 (ENSTNIG00000002933)	ENSTNIG00000002932 #22	ENSTNIG00000002931	ENSTNIG00000000337	slc52a2 (ENSTNIG00000002930)	nfatc1 (ENSTNIG00000002929)	ENSTNIG00000002928	pigk (ENSTNIG00000002902)	st6galnac3 (ENSTNIG00000002901)	rabggtb (ENSTNIG00000002900)	ENSTNIG00000002899	PNPLA7 (ENSTNIG00000002895)	clic3 (ENSTNIG00000002894)	ENSTNIG00000002893	OLFM1 (ENSTNIG00000002886)	fnbp1a (ENSTNIG00000002885)	med27 (ENSTNIG00000002884)
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Yellowtail amberjack	MODERN SPECIES	138																ENSSLDG00000002949 #22
Greater amberjack	MODERN SPECIES	32	ENSSDUG00000011484	gtf2h4 (ENSSDUG00000011367)	SH3BP5L (ENSSDUG00000011347)	ENSSDUG00000011329	GABBR1 (ENSSDUG00000011267)	tnfa (ENSSDUG00000011254)	atat1 (ENSSDUG00000011205)	ENSSDUG00000011190	bag6l (ENSSDUG00000011135)	si:ch211-215a10.4 (ENSSDUG00000011108)	ENSSDUG00000011078	ENSSDUG00000011066	ENSSDUG00000011052	pleca (ENSSDUG00000010982)	ENSSDUG00000010964	ENSSDUG00000010953 #22	ENSSDUG00000010895	ENSSDUG00000010885	slc52a2 (ENSSDUG00000010873)	ENSSDUG00000010847	ENSSDUG00000010825	nfatc1 (ENSSDUG00000010801)	atp9b (ENSSDUG00000010623)	sall3b (ENSSDUG00000010584)	GALR1 (ENSSDUG00000010567)	ENSSDUG00000010557	ENSSDUG00000010529	scn1bb (ENSSDUG00000010514)	naxe (ENSSDUG00000010499)	LMNA (ENSSDUG00000010404)	usf2 (ENSSDUG00000010364)
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	622										ENSGT00940000160140.a.a.a	ENSGT00940000157594.f	ENSGT00390000007776.q	ENSGT01100000263484.B.b.b.a.a.b	ENSGT00530000063880.b.e.b	ENSGT00940000162855.a.a.a.b.b	ENSGT00940000154843.F.d.a #22	ENSGT00400000022514.d.b	ENSGT00400000024940.a	ENSGT00390000003774.b.b	ENSGT00390000003774.a.a.c.e	ENSGT00940000157616.j.a.a	ENSGT00940000157071.t	ENSGT00940000159356.a.b.b.a	ENSGT01050000244841.A.b.a.b.a.a.i.b	ENSGT00390000014772.k.f
Cyprininae_a	ANCESTRAL SPECIES	1	ENSGT01030000234542.b.a.a.a.a.j	ENSGT00940000158341.a.h	ENSGT00940000164926.j	ENSGT00940000160977.f.c	ENSGT00390000005125.r.a	ENSGT00950000183007.b.f.i.b	ENSGT00940000155909.o.b.b	ENSGT01030000234589.g.b.b.c	ENSGT01090000260033.a.a.b.b.a.c.a.b	ENSGT00940000160140.a.a.a	ENSGT00940000157594.f	ENSGT00390000007776.q	ENSGT01100000263484.B.b.b.a.a.b	ENSGT00530000063880.b.e.b	ENSGT00940000162855.a.a.a.b.b	ENSGT00940000154843.F.d.a #22	ENSGT00400000022514.d.b	ENSGT00400000024940.a	ENSGT00390000003774.b.b	ENSGT00390000003774.a.a.c.e	ENSGT00940000157616.j.a.a	ENSGT00940000157071.t	ENSGT00940000159356.a.b.b.a	ENSGT01050000244841.A.b.a.b.a.a.i.b	ENSGT00390000014772.k.f	ENSGT00940000161408.b	ENSGT00950000183051.a.a.a.b	ENSGT00940000156500.f	ENSGT00390000010779.a.b.a.e	ENSGT00530000063631.a.k.a	ENSGT00510000047030.d.q.a
Common carp reference	MODERN SPECIES	31	ENSCCRG00000027723	ssr2 (ENSCCRG00000065725)	ENSCCRG00000078707	grb10a (ENSCCRG00000041639)	ENSCCRG00000036032	ENSCCRG00000067693	ENSCCRG00000043241	ENSCCRG00000073070	ENSCCRG00000007042	gdf6b (ENSCCRG00000016137)	nudcd1 (ENSCCRG00000016150)	trhrb (ENSCCRG00000011257)	TMEM74 (ENSCCRG00000066050)	pleca (ENSCCRG00000003243)	ENSCCRG00000070090	eppk1 (ENSCCRG00000067005) #22	ENSCCRG00000048111	ENSCCRG00000076741	nfatc1 (ENSCCRG00000042043)	atp9b (ENSCCRG00000079182)	sall3b (ENSCCRG00000040618)	ENSCCRG00000055835	GALR1 (ENSCCRG00000058396)	ENSCCRG00000076353	znf516 (ENSCCRG00000060631)	ENSCCRG00000067793	tshz1 (ENSCCRG00000078395)	ENSCCRG00000068758	cndp2 (ENSCCRG00000021131)	txnl4a (ENSCCRG00000020409)	adnp2b (ENSCCRG00000020419)
Goldfish	MODERN SPECIES	31	pno1 (ENSCARG00000047146)	dnaaf10 (ENSCARG00000047188)	ENSCARG00000047284	ENSCARG00000047302	ENSCARG00000047313	ENSCARG00000047321	ENSCARG00000047327	ENSCARG00000047344	gdf6b (ENSCARG00000047352)	ENSCARG00000047358	nudcd1 (ENSCARG00000047365)	trhrb (ENSCARG00000047818)	TMEM74 (ENSCARG00000047825)	eif3eb (ENSCARG00000047873)	pleca (ENSCARG00000048359)	eppk1 (ENSCARG00000050478) #22	slc52a2 (ENSCARG00000050490)	ENSCARG00000050504	nfatc1 (ENSCARG00000050532)	atp9b (ENSCARG00000050564)	sall3b (ENSCARG00000050609)	ENSCARG00000050618	ENSCARG00000050624	ENSCARG00000050628	ENSCARG00000050645	VIT (ENSCARG00000050687)	lgi1a (ENSCARG00000050741)	fbxo28 (ENSCARG00000050933)	degs1 (ENSCARG00000050939)	ENSCARG00000050951	slit1a (ENSCARG00000051117)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d.b #22
Common carp reference	MODERN SPECIES	12	ENSCCRG00000077204	ENSCCRG00000056175	ENSCCRG00000066732	ENSCCRG00000016020	ENSCCRG00000055239	ENSCCRG00000016018	ENSCCRG00000074991	ENSCCRG00000016016	gdf6b (ENSCCRG00000053794)	pkhd1l1.2 (ENSCCRG00000016002)	nudcd1 (ENSCCRG00000015989)	trhrb (ENSCCRG00000016161)	ENSCCRG00000065900	ENSCCRG00000007415	pleca (ENSCCRG00000042048)	eppk1 (ENSCCRG00000069112) #22	fbxl6 (ENSCCRG00000060495)	slc52a2 (ENSCCRG00000042060)	ENSCCRG00000042066	ENSCCRG00000048113	nfatc1 (ENSCCRG00000007446)	ENSCCRG00000061462	atp9b (ENSCCRG00000040711)	sall3b (ENSCCRG00000079531)	GALR1 (ENSCCRG00000069851)	ENSCCRG00000058472	znf516 (ENSCCRG00000026041)	tshz1 (ENSCCRG00000055930)	ENSCCRG00000043638	cndp2 (ENSCCRG00000020392)	txnl4a (ENSCCRG00000021097)
Zebrafish	MODERN SPECIES	10	ENSDARG00000116021	ENSDARG00000115374	ENSDARG00000116558	ENSDARG00000111332	ENSDARG00000092249	ENSDARG00000094710	irgf1 (ENSDARG00000070774)	grb10a (ENSDARG00000002013)	gdf6b (ENSDARG00000005510)	pkhd1l1.2 (ENSDARG00000040004)	pkhd1l1.1 (ENSDARG00000091116)	nudcd1 (ENSDARG00000036158)	trhrb (ENSDARG00000036159)	eif3eb (ENSDARG00000002549)	pleca (ENSDARG00000062590)	eppk1 (ENSDARG00000096359) #22	fbxl6 (ENSDARG00000077227)	ENSDARG00000070800	slc52a2 (ENSDARG00000102035)	ENSDARG00000062502	nfatc1 (ENSDARG00000036168)	atp9b (ENSDARG00000062521)	sall3b (ENSDARG00000057586)	GALR1 (ENSDARG00000005522)	ENSDARG00000111408	ENSDARG00000036186	znf516 (ENSDARG00000070809)	tshz1 (ENSDARG00000005026)	cndp2 (ENSDARG00000003931)	txnl4a (ENSDARG00000036190)	adnp2b (ENSDARG00000028431)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000154843.F.d #22
Characoidei	ANCESTRAL SPECIES	33	ENSGT00390000006540	ENSGT00530000063631.a.k	ENSGT00390000010779.a.b.a	ENSGT00940000163253.a.a.b	ENSGT00390000007597	ENSGT00940000156934.k	ENSGT00940000160140.a.a	ENSGT00940000157594	ENSGT00390000007776	ENSGT01100000263484.B.b.b.a.a	ENSGT00530000063880.b.e	ENSGT00390000002661.b.ub.a	ENSGT00940000162855.a.a.a.b	ENSGT00940000162855.a.b	ENSGT00400000022514	ENSGT00940000154843.F.d #22	ENSGT00390000009358	ENSGT00400000024940	ENSGT00390000003774.b	ENSGT00390000003774.a.a.c	ENSGT00940000157616.j.a	ENSGT00940000157071	ENSGT00940000159356.a.b	ENSGT01050000244841.A.b.a.b.a.a.i	ENSGT00390000014772.k	ENSGT00940000161408	ENSGT00950000183051.a.a.a	ENSGT00940000156500	ENSGT00940000166193	ENSGT01040000240444.B.a	ENSGT00950000182914.a.a.a.c.b
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	31	plek (ENSPNAG00000004768)	cnrip1b (ENSPNAG00000006356)	PPP3R1 (ENSPNAG00000024959)	pno1 (ENSPNAG00000004824)	dnaaf10 (ENSPNAG00000024906)	psmb1 (ENSPNAG00000024895)	perp (ENSPNAG00000024864)	TNFAIP3 (ENSPNAG00000024835)	olig3 (ENSPNAG00000024761)	si:ch73-52p7.1 (ENSPNAG00000024752)	ifngr1l (ENSPNAG00000024743)	rab23 (ENSPNAG00000024728)	bag2 (ENSPNAG00000024676)	ENSPNAG00000005368	DST (ENSPNAG00000024585)	ENSPNAG00000007002 #22	ENSPNAG00000006656	ENSPNAG00000024132	ENSPNAG00000003806	bmp5 (ENSPNAG00000024063)	hmgcll1 (ENSPNAG00000024006)	ENSPNAG00000006247	hcrtr2 (ENSPNAG00000006133)	FAM83B (ENSPNAG00000023843)	ENSPNAG00000023793	lrrc1 (ENSPNAG00000023749)	ENSPNAG00000023699	klhl31 (ENSPNAG00000023686)	gclc (ENSPNAG00000023665)	elovl5 (ENSPNAG00000023600)	fbxo9 (ENSPNAG00000023567)
Red-bellied piranha	MODERN SPECIES	419								maneal (ENSPNAG00000020460)	PKHD1L1 (ENSPNAG00000021123)	nudcd1 (ENSPNAG00000021192)	trhrb (ENSPNAG00000021207)	TMEM74 (ENSPNAG00000021218)	eif3eb (ENSPNAG00000021274)	ENSPNAG00000021290	pleca (ENSPNAG00000022061)	ENSPNAG00000022208 #22	ENSPNAG00000022231	ENSPNAG00000022246	slc52a2 (ENSPNAG00000022266)
Elephant shark	MODERN SPECIES	1593	myca (ENSCMIG00000015447)	CALML3 (ENSCMIG00000015443)	fam49bb (ENSCMIG00000015424)	asap1a (ENSCMIG00000014879)	tmem65 (ENSCMIG00000014791)	ENSCMIG00000014770	FER1L6 (ENSCMIG00000014703)	rmdn1 (ENSCMIG00000014657)	WWP1 (ENSCMIG00000014613)	ENSCMIG00000014602	MTSS1 (ENSCMIG00000014581)	ndufb9 (ENSCMIG00000014560)	ENSCMIG00000014558	ENSCMIG00000014553	riok1 (ENSCMIG00000014537) #20	DSP (ENSCMIG00000014523) #22	ENSCMIG00000014512 #23	ENSCMIG00000014509	si:ch211-106n13.3 (ENSCMIG00000014505)	zgc:101569 (ENSCMIG00000014501)	bmp6 (ENSCMIG00000014499) #24	txndc5 (ENSCMIG00000014493) #25	ENSCMIG00000014488 #27
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000154843.F #22
Hagfish	DUPLICATION
Hagfish	MODERN SPECIES	1468													ENSEBUG00000005076	ENSEBUG00000007035	ENSEBUG00000008385	ENSEBUG00000000945 #22	ENSEBUG00000003194	ENSEBUG00000015640	ENSEBUG00000001636	ENSEBUG00000009149
Hagfish	MODERN SPECIES	54	ENSEBUG00000005505	ENSEBUG00000013779	selenon (ENSEBUG00000001113)	ENSEBUG00000007947	ENSEBUG00000010193	ENSEBUG00000013628	ENSEBUG00000016541	ENSEBUG00000014123	ENSEBUG00000002347	ENSEBUG00000016055	ENSEBUG00000001302	ENSEBUG00000009992	ENSEBUG00000008959	ENSEBUG00000002422	ENSEBUG00000011596	ENSEBUG00000015084 #22	ENSEBUG00000013363 ##22	ENSEBUG00000015647	ENSEBUG00000016078	ENSEBUG00000013708	ENSEBUG00000010630	ENSEBUG00000012726	ENSEBUG00000013281	ENSEBUG00000008816	ENSEBUG00000014711	ENSEBUG00000004116	ENSEBUG00000009729	ndor1 (ENSEBUG00000006362)	dctd (ENSEBUG00000007299)	ENSEBUG00000011340	ENSEBUG00000003724
Lamprey	MODERN SPECIES	5821																ENSPMAG00000001531 #22
Ciona	ANCESTRAL SPECIES	352														ENSGT00390000017288	ENSGT00940000156118.e.b	ENSGT00940000154843.F #22	ENSGT00940000154843.D ##22
Ciona savignyi	MODERN SPECIES	286	ENSCSAVG00000004548	ENSCSAVG00000004541	ENSCSAVG00000004534	ENSCSAVG00000004528	ENSCSAVG00000004520	ENSCSAVG00000004495	ENSCSAVG00000004494	ENSCSAVG00000004481	ENSCSAVG00000004479	ENSCSAVG00000004469	ENSCSAVG00000004453	ENSCSAVG00000004445	ENSCSAVG00000004439	ENSCSAVG00000004419	ENSCSAVG00000004416	ENSCSAVG00000004412 #22	ENSCSAVG00000004411 ##22	ENSCSAVG00000004392	ENSCSAVG00000004375	ENSCSAVG00000004167	ENSCSAVG00000004162	ENSCSAVG00000003814	ENSCSAVG00000003662
Ciona intestinalis	MODERN SPECIES	7	ENSCING00000020096	ENSCING00000023752	ENSCING00000005016	ENSCING00000022572	ENSCING00000022863	ENSCING00000005021	ENSCING00000005023	ENSCING00000005044	ENSCING00000021068	ENSCING00000005053	ENSCING00000005057	ENSCING00000004996	ENSCING00000018228	ENSCING00000005010	ENSCING00000024637	ENSCING00000017260 #22	ENSCING00000022573 ##22	ENSCING00000011663	ENSCING00000004991	ENSCING00000011662	ENSCING00000023152	ENSCING00000019795	ENSCING00000004994	ENSCING00000022791	ENSCING00000017004	ENSCING00000004985	ENSCING00000022874	ENSCING00000022188	ENSCING00000019970	ENSCING00000022368	ENSCING00000024982
Chordata	DUPLICATION
Chordata	DUPLICATION
Chordata	DUPLICATION
Chordata	DUPLICATION
Chordata	ANCESTRAL SPECIES																	ENSGT00940000154843.A ##22
Ciona	ANCESTRAL SPECIES																	ENSGT00940000154843.A ##22
Ciona savignyi	MODERN SPECIES	70	ENSCSAVG00000009265	ENSCSAVG00000009269	ENSCSAVG00000009280	ENSCSAVG00000009282	ENSCSAVG00000009285	ENSCSAVG00000009288	ENSCSAVG00000009326	ENSCSAVG00000009404	ENSCSAVG00000009411	ENSCSAVG00000009421	ENSCSAVG00000009444	ENSCSAVG00000009450 ##22	ENSCSAVG00000009452	ENSCSAVG00000009457 ##22	ENSCSAVG00000009463	ENSCSAVG00000009465 ##22	ENSCSAVG00000009471	ENSCSAVG00000009473	ENSCSAVG00000009487	ENSCSAVG00000009491	ENSCSAVG00000009708	ENSCSAVG00000009713	ENSCSAVG00000009718	ENSCSAVG00000009721	ENSCSAVG00000009768	ENSCSAVG00000009770	ENSCSAVG00000009772
Vertebrata	ANCESTRAL SPECIES																	ENSGT00940000154843.A ##22
Cyclostomata	ANCESTRAL SPECIES																	ENSGT00940000154843.A ##22
Hagfish	MODERN SPECIES	54	ENSEBUG00000013779	selenon (ENSEBUG00000001113)	ENSEBUG00000007947	ENSEBUG00000010193	ENSEBUG00000013628	ENSEBUG00000016541	ENSEBUG00000014123	ENSEBUG00000002347	ENSEBUG00000016055	ENSEBUG00000001302	ENSEBUG00000009992	ENSEBUG00000008959	ENSEBUG00000002422	ENSEBUG00000011596	ENSEBUG00000015084 #22	ENSEBUG00000013363 ##22	ENSEBUG00000015647	ENSEBUG00000016078	ENSEBUG00000013708	ENSEBUG00000010630	ENSEBUG00000012726	ENSEBUG00000013281	ENSEBUG00000008816	ENSEBUG00000014711	ENSEBUG00000004116	ENSEBUG00000009729	ndor1 (ENSEBUG00000006362)	dctd (ENSEBUG00000007299)	ENSEBUG00000011340	ENSEBUG00000003724	ENSEBUG00000007387
Chordata	ANCESTRAL SPECIES																	ENSGT00940000154843.B ##22
Ciona	ANCESTRAL SPECIES																	ENSGT00940000154843.B ##22
Ciona savignyi	DUPLICATION
Ciona savignyi	MODERN SPECIES	70	ENSCSAVG00000008593	ENSCSAVG00000009234	ENSCSAVG00000009235	ENSCSAVG00000009262	ENSCSAVG00000009265	ENSCSAVG00000009269	ENSCSAVG00000009280	ENSCSAVG00000009282	ENSCSAVG00000009285	ENSCSAVG00000009288	ENSCSAVG00000009326	ENSCSAVG00000009404	ENSCSAVG00000009411	ENSCSAVG00000009421	ENSCSAVG00000009444	ENSCSAVG00000009450 ##22	ENSCSAVG00000009452	ENSCSAVG00000009457 ##22	ENSCSAVG00000009463	ENSCSAVG00000009465 ##22	ENSCSAVG00000009471	ENSCSAVG00000009473	ENSCSAVG00000009487	ENSCSAVG00000009491	ENSCSAVG00000009708	ENSCSAVG00000009713	ENSCSAVG00000009718	ENSCSAVG00000009721	ENSCSAVG00000009768	ENSCSAVG00000009770	ENSCSAVG00000009772
Ciona savignyi	MODERN SPECIES	70	ENSCSAVG00000009235	ENSCSAVG00000009262	ENSCSAVG00000009265	ENSCSAVG00000009269	ENSCSAVG00000009280	ENSCSAVG00000009282	ENSCSAVG00000009285	ENSCSAVG00000009288	ENSCSAVG00000009326	ENSCSAVG00000009404	ENSCSAVG00000009411	ENSCSAVG00000009421	ENSCSAVG00000009444	ENSCSAVG00000009450 ##22	ENSCSAVG00000009452	ENSCSAVG00000009457 ##22	ENSCSAVG00000009463	ENSCSAVG00000009465 ##22	ENSCSAVG00000009471	ENSCSAVG00000009473	ENSCSAVG00000009487	ENSCSAVG00000009491	ENSCSAVG00000009708	ENSCSAVG00000009713	ENSCSAVG00000009718	ENSCSAVG00000009721	ENSCSAVG00000009768	ENSCSAVG00000009770	ENSCSAVG00000009772
Ciona intestinalis	MODERN SPECIES	8	ENSCING00000019161	ENSCING00000008745	ENSCING00000013440	ENSCING00000008743	ENSCING00000013439	ENSCING00000018111	ENSCING00000024998	ENSCING00000005333	ENSCING00000005295	ENSCING00000022940	ENSCING00000013397	ENSCING00000019628	ENSCING00000005289	ENSCING00000013396	ENSCING00000013395	ENSCING00000005284 ##22	ENSCING00000013394	ENSCING00000005276	ENSCING00000018640	ENSCING00000005266	ENSCING00000018189	ENSCING00000005262	ENSCING00000018173	ENSCING00000005238	ENSCING00000021768	ENSCING00000022447	ENSCING00000009166	ENSCING00000024980	ENSCING00000009176	ENSCING00000013389	ENSCING00000013388
Chordata	ANCESTRAL SPECIES																	ENSGT00940000154843.C ##22
Ciona	ANCESTRAL SPECIES																	ENSGT00940000154843.C ##22
Ciona savignyi	MODERN SPECIES	181	ENSCSAVG00000009675	ENSCSAVG00000009684	ENSCSAVG00000009685	ENSCSAVG00000009707	ENSCSAVG00000009714	ENSCSAVG00000009720	ENSCSAVG00000009728	ENSCSAVG00000009730	ENSCSAVG00000009731	ENSCSAVG00000009735	ENSCSAVG00000009739	ENSCSAVG00000009742	ENSCSAVG00000009745	ENSCSAVG00000009748	ENSCSAVG00000009864	ENSCSAVG00000009866 ##22	ENSCSAVG00000009867	ENSCSAVG00000009873	ENSCSAVG00000009878	ENSCSAVG00000009880	ENSCSAVG00000009882	ENSCSAVG00000009883	ENSCSAVG00000009887	ENSCSAVG00000009890	ENSCSAVG00000009892	ENSCSAVG00000009894	ENSCSAVG00000009895	ENSCSAVG00000010207	ENSCSAVG00000010209	ENSCSAVG00000010211	ENSCSAVG00000010212
Chordata	ANCESTRAL SPECIES																	ENSGT00940000154843.D ##22
Ciona	ANCESTRAL SPECIES	352													ENSGT00390000017288	ENSGT00940000156118.e.b	ENSGT00940000154843.F #22	ENSGT00940000154843.D ##22
Ciona intestinalis	MODERN SPECIES	7	ENSCING00000023752	ENSCING00000005016	ENSCING00000022572	ENSCING00000022863	ENSCING00000005021	ENSCING00000005023	ENSCING00000005044	ENSCING00000021068	ENSCING00000005053	ENSCING00000005057	ENSCING00000004996	ENSCING00000018228	ENSCING00000005010	ENSCING00000024637	ENSCING00000017260 #22	ENSCING00000022573 ##22	ENSCING00000011663	ENSCING00000004991	ENSCING00000011662	ENSCING00000023152	ENSCING00000019795	ENSCING00000004994	ENSCING00000022791	ENSCING00000017004	ENSCING00000004985	ENSCING00000022874	ENSCING00000022188	ENSCING00000019970	ENSCING00000022368	ENSCING00000024982	ENSCING00000011667
Ciona savignyi	MODERN SPECIES	286	ENSCSAVG00000004541	ENSCSAVG00000004534	ENSCSAVG00000004528	ENSCSAVG00000004520	ENSCSAVG00000004495	ENSCSAVG00000004494	ENSCSAVG00000004481	ENSCSAVG00000004479	ENSCSAVG00000004469	ENSCSAVG00000004453	ENSCSAVG00000004445	ENSCSAVG00000004439	ENSCSAVG00000004419	ENSCSAVG00000004416	ENSCSAVG00000004412 #22	ENSCSAVG00000004411 ##22	ENSCSAVG00000004392	ENSCSAVG00000004375	ENSCSAVG00000004167	ENSCSAVG00000004162	ENSCSAVG00000003814	ENSCSAVG00000003662
Chordata	ANCESTRAL SPECIES																	ENSGT00940000154843.E ##22
Ciona	ANCESTRAL SPECIES	40															ENSGT00730000111746.a	ENSGT00940000154843.E ##22	ENSGT00940000170969	ENSGT00940000153536	ENSGT00900000141094	ENSGT01020000234502	ENSGT00730000111263	ENSGT00940000158533	ENSGT00390000016972
Ciona savignyi	MODERN SPECIES	121	ENSCSAVG00000007465	ENSCSAVG00000007566	ENSCSAVG00000007585	ENSCSAVG00000007597	ENSCSAVG00000007738	ENSCSAVG00000007743	ENSCSAVG00000007759	ENSCSAVG00000007766	ENSCSAVG00000007772	ENSCSAVG00000007796	ENSCSAVG00000007799	ENSCSAVG00000007803	ENSCSAVG00000007804	ENSCSAVG00000007808	ENSCSAVG00000007816	ENSCSAVG00000007820 ##22	ENSCSAVG00000007823	ENSCSAVG00000007835	ENSCSAVG00000007837	ENSCSAVG00000007900	ENSCSAVG00000008448	ENSCSAVG00000008449	ENSCSAVG00000008451	ENSCSAVG00000008472	ENSCSAVG00000008475	ENSCSAVG00000008476	ENSCSAVG00000008482	ENSCSAVG00000008493	ENSCSAVG00000008494	ENSCSAVG00000008513	ENSCSAVG00000008528
Ciona intestinalis	MODERN SPECIES	11	ENSCING00000021551	ENSCING00000001757	ENSCING00000001755	ENSCING00000001749	ENSCING00000001748	ENSCING00000001743	ENSCING00000001740	ENSCING00000001730	ENSCING00000019761	ENSCING00000001758	ENSCING00000011910	ENSCING00000021337	ENSCING00000011911	ENSCING00000001761	ENSCING00000010149	ENSCING00000011912 ##22	ENSCING00000002947	ENSCING00000011914	ENSCING00000017944	ENSCING00000002923	ENSCING00000002874	ENSCING00000021056	ENSCING00000003660	ENSCING00000003691	ENSCING00000011918	ENSCING00000003694	ENSCING00000024743	ENSCING00000003704	ENSCING00000020672	ENSCING00000011919	ENSCING00000003706