Gnathostomata	ANCESTRAL SPECIES	190										ENSGT00940000156647	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000153503	ENSGT00940000158334	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000157357	ENSGT01050000244968.c
Euteleostomi	ANCESTRAL SPECIES	73	ENSGT00940000163514.C	ENSGT00940000159722	ENSGT00940000166182	ENSGT00940000161005	ENSGT00950000183015.E	ENSGT00940000158327	ENSGT00940000156413	ENSGT00940000158978	ENSGT00990000206303	ENSGT00390000017909	ENSGT00940000156647	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000153503	ENSGT00940000158334	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00940000157712	ENSGT00940000159747	ENSGT00940000158355	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00940000164992	ENSGT00940000165110	ENSGT00390000008582 #30
Sarcopterygii	ANCESTRAL SPECIES	192										ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000164917	ENSGT00940000153503	ENSGT00940000158334	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00940000165110	ENSGT00390000008582 #30	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Tetrapoda	ANCESTRAL SPECIES	171														ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Amniota	ANCESTRAL SPECIES	17	ENSGT00390000005922.b.c.b ##8	ENSGT00390000005922.b.d #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a	ENSGT00940000153322.B
Mammalia	ANCESTRAL SPECIES	32	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Theria	ANCESTRAL SPECIES	18	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Eutheria	ANCESTRAL SPECIES	6	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Primates	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225.g #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b.m #11	ENSGT00390000006178.cb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00910000147452 #17	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Gibbon	MODERN SPECIES	11	HARS2 (ENSNLEG00000009427) #7	HARS1 (ENSNLEG00000009389) #8	DND1 (ENSNLEG00000034318) #9	WDR55 (ENSNLEG00000033658) #10	IK (ENSNLEG00000009329) #11	ENSNLEG00000009325 #12	TMCO6 (ENSNLEG00000009308) #13	CD14 (ENSNLEG00000009307) #14	ENSNLEG00000034768 #15	ENSNLEG00000009304 #16	ENSNLEG00000032877 #17	ENSNLEG00000009275 #18	SRA1 (ENSNLEG00000034424) #19	ANKHD1 (ENSNLEG00000009235) #20	SLC4A9 (ENSNLEG00000009225) #21	HBEGF (ENSNLEG00000009220) #22	PFDN1 (ENSNLEG00000009218) #23	CYSTM1 (ENSNLEG00000009213) #24	IGIP (ENSNLEG00000033233) #25	ENSNLEG00000009209 #26	PSD2 (ENSNLEG00000009191) #27	CXXC5 (ENSNLEG00000009189) #28	UBE2D2 (ENSNLEG00000035655) #29	ENSNLEG00000009187 #30	SMIM33 (ENSNLEG00000009186) #31	ENSNLEG00000009185 #32	DNAJC18 (ENSNLEG00000009174) #33	SPATA24 (ENSNLEG00000009165) #34	PROB1 (ENSNLEG00000009161) #35	MZB1 (ENSNLEG00000029393) #36	SLC23A1 (ENSNLEG00000009149) #37
Hominidae	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225.g #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b.m #11	ENSGT00390000006178.cb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00910000147452 #17	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225.g #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b.m #11	ENSGT00390000006178.cb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00910000147452 #17	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008403.y.b	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225.g #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b.m #11	ENSGT00390000006178.cb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00910000147452 #17	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008403.y.b	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Pan	ANCESTRAL SPECIES	10	ENSGT00390000010712	ENSGT00390000005922.b.d.b.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225.g #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b.m #11	ENSGT00390000006178.cb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00910000147452 #17	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008403.y.b	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Bonobo	MODERN SPECIES	18	ZMAT2 (ENSPPAG00000034165)	HARS2 (ENSPPAG00000039406) #7	HARS1 (ENSPPAG00000039715) #8	DND1 (ENSPPAG00000031543) #9	WDR55 (ENSPPAG00000042662) #10	IK (ENSPPAG00000017619) #11	ENSPPAG00000029576 #12	TMCO6 (ENSPPAG00000037562) #13	CD14 (ENSPPAG00000041409) #14	ENSPPAG00000040115 #17	ENSPPAG00000036511 #16	APBB3 (ENSPPAG00000039248) #18	SRA1 (ENSPPAG00000032469) #19	ANKHD1 (ENSPPAG00000006129) #20	SLC4A9 (ENSPPAG00000005338) #21	HBEGF (ENSPPAG00000039648) #22	PFDN1 (ENSPPAG00000029009) #23	CYSTM1 (ENSPPAG00000031723) #24	IGIP (ENSPPAG00000018186) #25	PURA (ENSPPAG00000042421)	ENSPPAG00000035164 #26	PSD2 (ENSPPAG00000038244) #27	CXXC5 (ENSPPAG00000024008) #28	UBE2D2 (ENSPPAG00000040948) #29	ENSPPAG00000037385	STING1 (ENSPPAG00000031423) #30	SMIM33 (ENSPPAG00000036234) #31	ECSCR (ENSPPAG00000034856) #32	DNAJC18 (ENSPPAG00000029601) #33	SPATA24 (ENSPPAG00000033531) #34	PROB1 (ENSPPAG00000007840) #35
Chimpanzee	MODERN SPECIES	18	ZMAT2 (ENSPTRG00000017327)	HARS2 (ENSPTRG00000017326) #7	HARS1 (ENSPTRG00000017325) #8	DND1 (ENSPTRG00000017324) #9	WDR55 (ENSPTRG00000017323) #10	IK (ENSPTRG00000046901) #11	NDUFA2 (ENSPTRG00000017321) #12	TMCO6 (ENSPTRG00000017320) #13	CD14 (ENSPTRG00000028584) #14	ENSPTRG00000049309 #17	SLC35A4 (ENSPTRG00000017316) #16	APBB3 (ENSPTRG00000033999) #18	SRA1 (ENSPTRG00000017314) #19	EIF4EBP3 (ENSPTRG00000047729) #20	SLC4A9 (ENSPTRG00000017312) #21	HBEGF (ENSPTRG00000017311) #22	PFDN1 (ENSPTRG00000017310) #23	CYSTM1 (ENSPTRG00000017309) #24	IGIP (ENSPTRG00000049527) #25	NRG2 (ENSPTRG00000017306) #26	PSD2 (ENSPTRG00000017305) #27	CXXC5 (ENSPTRG00000017304) #28	UBE2D2 (ENSPTRG00000017303) #29	ENSPTRG00000048630	STING1 (ENSPTRG00000017301) #30	SMIM33 (ENSPTRG00000050106) #31	ECSCR (ENSPTRG00000039474) #32	DNAJC18 (ENSPTRG00000017300) #33	SPATA24 (ENSPTRG00000017299)	PROB1 (ENSPTRG00000039590) #35	MZB1 (ENSPTRG00000017298) #36
Human	MODERN SPECIES	17	HARS2 (ENSG00000112855) #7	HARS1 (ENSG00000170445) #8	DND1 (ENSG00000256453) #9	WDR55 (ENSG00000120314) #10	IK (ENSG00000113141) #11	TMCO6 (ENSG00000113119) #13	NDUFA2 (ENSG00000131495) ##12	CD14 (ENSG00000170458) #14	SLC35A4 (ENSG00000176087)	APBB3 (ENSG00000113108) #18	EIF4EBP3 (ENSG00000243056)	SRA1 (ENSG00000213523) #19	ANKHD1-EIF4EBP3 (ENSG00000254996)	ANKHD1 (ENSG00000131503) #20	SLC4A9 (ENSG00000113073) #21	HBEGF (ENSG00000113070) #22	PFDN1 (ENSG00000113068) #23	CYSTM1 (ENSG00000120306) #24	IGIP (ENSG00000182700) #25	PURA (ENSG00000185129)	NRG2 (ENSG00000158458) #26	PSD2 (ENSG00000146005) #27	CXXC5 (ENSG00000171604) #28	UBE2D2 (ENSG00000131508) #29	STING1 (ENSG00000184584) #30	SMIM33 (ENSG00000283288) #31	ECSCR (ENSG00000249751) #32	DNAJC18 (ENSG00000170464) #33	SPATA24 (ENSG00000170469) #34	PROB1 (ENSG00000228672) #35	MZB1 (ENSG00000170476) #36
Gorilla	MODERN SPECIES	18	ENSGGOG00000044128 #9	ENSGGOG00000025477 #8	ENSGGOG00000013169 #8	ENSGGOG00000042535 #9	WDR55 (ENSGGOG00000013388) #10	IK (ENSGGOG00000013374) #11	ENSGGOG00000013369 #12	TMCO6 (ENSGGOG00000013364) #13	CD14 (ENSGGOG00000010370) #14	ENSGGOG00000037182 #17	ENSGGOG00000004098 #16	APBB3 (ENSGGOG00000015880) #18	SRA1 (ENSGGOG00000042935) #19	ANKHD1 (ENSGGOG00000000288) #20	SLC4A9 (ENSGGOG00000000287) #21	HBEGF (ENSGGOG00000000286) #22	PFDN1 (ENSGGOG00000022554) #23	IGIP (ENSGGOG00000040159) #25	PURA (ENSGGOG00000002201)	ENSGGOG00000008570 #26	PSD2 (ENSGGOG00000014212) #27	CXXC5 (ENSGGOG00000014181) #28	UBE2D2 (ENSGGOG00000001368) #29	ENSGGOG00000042718	ENSGGOG00000028307	STING1 (ENSGGOG00000016173) #30	SMIM33 (ENSGGOG00000023790) #31	ECSCR (ENSGGOG00000022193) #32	ENSGGOG00000002755 #33	ENSGGOG00000042066 #36	ENSGGOG00000006909
Orangutan	MODERN SPECIES	18	ZMAT2 (ENSPPYG00000015866)	HARS2 (ENSPPYG00000015865) #7	HARS1 (ENSPPYG00000015864) #8	DND1 (ENSPPYG00000015863) #9	WDR55 (ENSPPYG00000015862) #10	IK (ENSPPYG00000015861) #11	NDUFA2 (ENSPPYG00000036662) ##12	TMCO6 (ENSPPYG00000015859) #13	CD14 (ENSPPYG00000015858) #14	SLC35A4 (ENSPPYG00000015857)	APBB3 (ENSPPYG00000015856) #18	SRA1 (ENSPPYG00000015855) #19	EIF4EBP3 (ENSPPYG00000041086)	ANKHD1 (ENSPPYG00000015854) #20	SLC4A9 (ENSPPYG00000015853) #21	HBEGF (ENSPPYG00000015852) #22	PFDN1 (ENSPPYG00000030565) #23	CYSTM1 (ENSPPYG00000015850) #24	IGIP (ENSPPYG00000015849) #25	PURA (ENSPPYG00000015848)	NRG2 (ENSPPYG00000015847) #26	PSD2 (ENSPPYG00000015846) #27	CXXC5 (ENSPPYG00000015845) #28	UBE2D2 (ENSPPYG00000015844) #29	STING1 (ENSPPYG00000015843) #30	SMIM33 (ENSPPYG00000015842) #31	ECSCR (ENSPPYG00000029508) #32	DNAJC18 (ENSPPYG00000015841) #33	ENSPPYG00000015840	PROB1 (ENSPPYG00000015839) #35	MZB1 (ENSPPYG00000015838) #36
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00390000003338.j	ENSGT00400000023549 #32	ENSGT00910000147232	ENSGT00940000160925 #33	ENSGT00390000007817 #34
Rhinopithecus	ANCESTRAL SPECIES	17	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a.e #10	ENSGT00940000153727.a.f #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00950000183198.c.a.a.b	ENSGT00940000153169.A.b.a #29	ENSGT00390000008403.y.b	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00390000003338.j	ENSGT00400000023549 #32	ENSGT00910000147232	ENSGT00940000160925 #33
Golden snub-nosed monkey	MODERN SPECIES	2661	ZMAT2 (ENSRROG00000032700)	HARS2 (ENSRROG00000036375) #7	HARS1 (ENSRROG00000033541) #8	DND1 (ENSRROG00000039329) #9	ENSRROG00000041702 #10	IK (ENSRROG00000030823) #11	ENSRROG00000044049 ##12	TMCO6 (ENSRROG00000035531) #13	CD14 (ENSRROG00000038241) #14	ENSRROG00000035897 #16	APBB3 (ENSRROG00000036652) #18	SRA1 (ENSRROG00000011630) #19	ENSRROG00000004069	ANKHD1 (ENSRROG00000039204) #20	SLC4A9 (ENSRROG00000034854) #21	HBEGF (ENSRROG00000030102) #22	PFDN1 (ENSRROG00000040145) #23	CYSTM1 (ENSRROG00000036603) #24	IGIP (ENSRROG00000026912) #25	NRG2 (ENSRROG00000038771) #26	PSD2 (ENSRROG00000045335) #27	CXXC5 (ENSRROG00000029126) #28	ENSRROG00000011472	UBE2D2 (ENSRROG00000038257) #29	STING1 (ENSRROG00000045289) #30	SMIM33 (ENSRROG00000002030) #31	ENSRROG00000038396	ECSCR (ENSRROG00000044102) #32	ENSRROG00000045210	DNAJC18 (ENSRROG00000030819) #33	ENSRROG00000042791
Black snub-nosed monkey	MODERN SPECIES	471				TMCO6 (ENSRBIG00000026478) #13	CD14 (ENSRBIG00000035122) #14	ENSRBIG00000034843	ENSRBIG00000032495 #15	SLC35A4 (ENSRBIG00000028079)	ENSRBIG00000035672 #16	ENSRBIG00000038489	APBB3 (ENSRBIG00000027669) #18	SRA1 (ENSRBIG00000035226) #19	ANKHD1 (ENSRBIG00000028708) #20	ENSRBIG00000006398	SLC4A9 (ENSRBIG00000028276) #21	HBEGF (ENSRBIG00000038837) #22	PFDN1 (ENSRBIG00000031808) #23	CYSTM1 (ENSRBIG00000028347) #24	IGIP (ENSRBIG00000001118) #25	NRG2 (ENSRBIG00000037155) #26	PSD2 (ENSRBIG00000037460) #27	CXXC5 (ENSRBIG00000044927) #28	ENSRBIG00000041480	UBE2D2 (ENSRBIG00000032524) #29
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F.c	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.h #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00390000003338.j	ENSGT00400000023549 #32	ENSGT00910000147232	ENSGT00940000160925 #33	ENSGT00390000007817 #34
Vervet Monkey	MODERN SPECIES	15	ZMAT2 (ENSCSAG00000012639)	HARS2 (ENSCSAG00000012655) #7	HARS1 (ENSCSAG00000012664) #8	DND1 (ENSCSAG00000012677) #9	WDR55 (ENSCSAG00000012681) #10	IK (ENSCSAG00000012695) #11	NDUFA2 (ENSCSAG00000012711) ##12	TMCO6 (ENSCSAG00000012735) #13	CD14 (ENSCSAG00000012743) #14	SLC35A4 (ENSCSAG00000000493)	APBB3 (ENSCSAG00000012804) #18	SRA1 (ENSCSAG00000012824) #19	EIF4EBP3 (ENSCSAG00000012830)	ANKHD1 (ENSCSAG00000012854) #20	SLC4A9 (ENSCSAG00000012893) #21	HBEGF (ENSCSAG00000012908) #22	PFDN1 (ENSCSAG00000012913) #23	CYSTM1 (ENSCSAG00000012920) #24	IGIP (ENSCSAG00000000494) #25	PURA (ENSCSAG00000000495)	NRG2 (ENSCSAG00000012979) #26	PSD2 (ENSCSAG00000012999) #27	CXXC5 (ENSCSAG00000013001) #28	ENSCSAG00000013007 #29	STING1 (ENSCSAG00000013013) #30	SMIM33 (ENSCSAG00000000496) #31	ECSCR (ENSCSAG00000013023) #32	DNAJC18 (ENSCSAG00000013027) #33	SPATA24 (ENSCSAG00000013050) #34	PROB1 (ENSCSAG00000000497) #35	MZB1 (ENSCSAG00000013057) #36
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F.c	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00910000147971	ENSGT00940000154810.d.c.a.b	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.h #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00390000003338.j	ENSGT00400000023549 #32	ENSGT00910000147232
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00390000010712	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F.c	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00910000147971	ENSGT00940000154810.d.c.a.b	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.g.b #29	ENSGT00940000153169.A.b.a.h #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00390000003338.j	ENSGT00400000023549 #32
Olive baboon	MODERN SPECIES	15	ZMAT2 (ENSPANG00000032021)	HARS2 (ENSPANG00000011662) #7	HARS1 (ENSPANG00000011928) #8	DND1 (ENSPANG00000007892) #9	WDR55 (ENSPANG00000015777) #10	IK (ENSPANG00000019171) #11	NDUFA2 (ENSPANG00000035408) ##12	TMCO6 (ENSPANG00000003022) #13	CD14 (ENSPANG00000011929) #14	SLC35A4 (ENSPANG00000024663)	ENSPANG00000031921 #16	APBB3 (ENSPANG00000006033) #18	SRA1 (ENSPANG00000008615) #19	ANKHD1 (ENSPANG00000000200) #20	SLC4A9 (ENSPANG00000002472) #21	HBEGF (ENSPANG00000011663) #22	ENSPANG00000038370	PFDN1 (ENSPANG00000016007) #23	CYSTM1 (ENSPANG00000003994) #24	IGIP (ENSPANG00000030616) #25	PURA (ENSPANG00000003664)	ENSPANG00000037445	ENSPANG00000047020	NRG2 (ENSPANG00000010408) #26	PSD2 (ENSPANG00000002492) #27	CXXC5 (ENSPANG00000011930) #28	UBE2D2 (ENSPANG00000012017) #29	SPATA24 (ENSPANG00000003080) #34	DNAJC18 (ENSPANG00000008878) #33	ECSCR (ENSPANG00000040763) #32	SMIM33 (ENSPANG00000003457) #31
Cercopithecinae_d	ANCESTRAL SPECIES	18	ENSGT00390000010712	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00910000147452 #17	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00910000147971	ENSGT00940000154810.d.c.a.b	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.h #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00390000003338.j	ENSGT00400000023549 #32	ENSGT00910000147232
Drill	MODERN SPECIES	1446	PCDHAC2 (ENSMLEG00000001069)	ZMAT2 (ENSMLEG00000041320)	HARS2 (ENSMLEG00000014240) #7	HARS1 (ENSMLEG00000016289) #8	DND1 (ENSMLEG00000044049) #9	WDR55 (ENSMLEG00000035918) #10	IK (ENSMLEG00000018434) #11	NDUFA2 (ENSMLEG00000043870) ##12	TMCO6 (ENSMLEG00000043597) #13	CD14 (ENSMLEG00000040468) #14	ENSMLEG00000042111 #16	APBB3 (ENSMLEG00000017053) #18	SRA1 (ENSMLEG00000036807) #19	ANKHD1 (ENSMLEG00000029310) #20	SLC4A9 (ENSMLEG00000000295) #21	HBEGF (ENSMLEG00000040667) #22	PFDN1 (ENSMLEG00000042368) #23
Sooty mangabey	MODERN SPECIES	309	ZMAT2 (ENSCATG00000032843)	HARS2 (ENSCATG00000034017) #7	HARS1 (ENSCATG00000036942) #8	DND1 (ENSCATG00000025088) #9	WDR55 (ENSCATG00000034527) #10	IK (ENSCATG00000044094) #11	NDUFA2 (ENSCATG00000036702) ##12	TMCO6 (ENSCATG00000032823) #13	CD14 (ENSCATG00000030860) #14	ENSCATG00000034680 #17	ENSCATG00000031674 #16	APBB3 (ENSCATG00000032944) #18	SRA1 (ENSCATG00000044295) #19	ANKHD1 (ENSCATG00000029425) #20	SLC4A9 (ENSCATG00000022107) #21	HBEGF (ENSCATG00000044743) #22	PFDN1 (ENSCATG00000018995) #23	CYSTM1 (ENSCATG00000044800) #24	IGIP (ENSCATG00000021454) #25	ENSCATG00000022576	ENSCATG00000035952	NRG2 (ENSCATG00000044418) #26	PSD2 (ENSCATG00000044665) #27	CXXC5 (ENSCATG00000043130) #28	UBE2D2 (ENSCATG00000042514) #29	STING1 (ENSCATG00000044054) #30	SMIM33 (ENSCATG00000034867) #31	ENSCATG00000029689	ECSCR (ENSCATG00000041654) #32	ENSCATG00000018488	DNAJC18 (ENSCATG00000036027) #33
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F.c	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00910000147971	ENSGT00940000154810.d.c.a.b	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.h #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34
Pig-tailed macaque	MODERN SPECIES	383	ZMAT2 (ENSMNEG00000031600)	HARS2 (ENSMNEG00000040270) #7	HARS1 (ENSMNEG00000020918) #8	DND1 (ENSMNEG00000038956) #9	WDR55 (ENSMNEG00000042797) #10	IK (ENSMNEG00000020155) #11	NDUFA2 (ENSMNEG00000033708) ##12	TMCO6 (ENSMNEG00000037241) #13	CD14 (ENSMNEG00000031928) #14	ENSMNEG00000040012 #15	ENSMNEG00000040672 #16	APBB3 (ENSMNEG00000029415) #18	SRA1 (ENSMNEG00000029401) #19	ANKHD1 (ENSMNEG00000030029) #20	SLC4A9 (ENSMNEG00000044652) #21	HBEGF (ENSMNEG00000029451) #22	PFDN1 (ENSMNEG00000038519) #23	CYSTM1 (ENSMNEG00000045095) #24	IGIP (ENSMNEG00000018399) #25	ENSMNEG00000001486	ENSMNEG00000041839	NRG2 (ENSMNEG00000029541) #26	PSD2 (ENSMNEG00000043579) #27	CXXC5 (ENSMNEG00000037432) #28	UBE2D2 (ENSMNEG00000034060) #29	STING1 (ENSMNEG00000039403) #30	SMIM33 (ENSMNEG00000043798) #31	ECSCR (ENSMNEG00000037834) #32	DNAJC18 (ENSMNEG00000045280) #33	SPATA24 (ENSMNEG00000041746) #34	MZB1 (ENSMNEG00000040385) #36
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.bb.a ##12	ENSGT00390000008104 #13	ENSGT01100000263493.b.a.a.a.b.b	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F.c	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000164709.a.b.b.a.b.a.a.b	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.h #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00940000164708	ENSGT00950000182953.C.d #37
Crab-eating macaque	MODERN SPECIES	16	HARS1 (ENSMFAG00000002630) #8	DND1 (ENSMFAG00000003284) #9	WDR55 (ENSMFAG00000001095) #10	NDUFA2 (ENSMFAG00000049634) ##12	IK (ENSMFAG00000040961) #11	TMCO6 (ENSMFAG00000034339) #13	ENSMFAG00000058253	CD14 (ENSMFAG00000025943) #14	ENSMFAG00000058854	SLC35A4 (ENSMFAG00000041351)	APBB3 (ENSMFAG00000001205) #18	SRA1 (ENSMFAG00000007347) #19	ANKHD1 (ENSMFAG00000041567) #20	ENSMFAG00000061909	SLC4A9 (ENSMFAG00000033873) #21	HBEGF (ENSMFAG00000043747) #22	PFDN1 (ENSMFAG00000044428) #23	CYSTM1 (ENSMFAG00000030823) #24	NRG2 (ENSMFAG00000036960) #26	PSD2 (ENSMFAG00000035669) #27	CXXC5 (ENSMFAG00000042243) #28	UBE2D2 (ENSMFAG00000003689) #29	STING1 (ENSMFAG00000001679) #30	ECSCR (ENSMFAG00000045474) #32	DNAJC18 (ENSMFAG00000033878) #33	ENSMFAG00000035823	SLC23A1 (ENSMFAG00000042397) #37	PAIP2 (ENSMFAG00000032588)	MATR3 (ENSMFAG00000000634)	ENSMFAG00000057580	SIL1 (ENSMFAG00000035604)
Rhesus	MODERN SPECIES	16	HARS2 (ENSMMUG00000004483) #7	HARS1 (ENSMMUG00000004481) #8	DND1 (ENSMMUG00000052950) #9	WDR55 (ENSMMUG00000058653) #10	IK (ENSMMUG00000010008) #11	NDUFA2 (ENSMMUG00000056796) ##12	TMCO6 (ENSMMUG00000018246) #13	ENSMMUG00000060632	CD14 (ENSMMUG00000010007) #14	ENSMMUG00000062326	SLC35A4 (ENSMMUG00000001725)	APBB3 (ENSMMUG00000001707) #18	EIF4EBP3 (ENSMMUG00000019582) #20	ENSMMUG00000063513	SLC4A9 (ENSMMUG00000003723) #21	HBEGF (ENSMMUG00000060742) #22	CYSTM1 (ENSMMUG00000059630) #24	PFDN1 (ENSMMUG00000003279) #23	PURA (ENSMMUG00000010305)	NRG2 (ENSMMUG00000010301) #26	PSD2 (ENSMMUG00000014636) #27	ENSMMUG00000064016	CXXC5 (ENSMMUG00000001941) #28	UBE2D2 (ENSMMUG00000020666) #29	STING1 (ENSMMUG00000012048) #30	ECSCR (ENSMMUG00000061364)	DNAJC18 (ENSMMUG00000018744) #33	SPATA24 (ENSMMUG00000023071) #34	PROB1 (ENSMMUG00000062971) #35	MZB1 (ENSMMUG00000058774) #36	ENSMMUG00000050756
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.ab #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000006029.b #15	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.jb.b #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.l.b #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Cebidae	ANCESTRAL SPECIES	6	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.ab #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000006029.b #15	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.jb.b #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.l.b #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.ab #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000006029.b #15	ENSGT00390000007844 #16	ENSGT01010000226306	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.jb.b #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.l.b #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Capuchin	MODERN SPECIES	101	ENSCCAG00000036402	HARS1 (ENSCCAG00000024213) #8	DND1 (ENSCCAG00000020065) #9	WDR55 (ENSCCAG00000032739) #10	ENSCCAG00000027098	IK (ENSCCAG00000022729) #11	ENSCCAG00000036213 #12	TMCO6 (ENSCCAG00000019619) #13	CD14 (ENSCCAG00000022555) #14	ENSCCAG00000020715	ENSCCAG00000030910 #16	APBB3 (ENSCCAG00000038002) #18	SRA1 (ENSCCAG00000029225) #19	ANKHD1 (ENSCCAG00000036565) #20	SLC4A9 (ENSCCAG00000030814) #21	HBEGF (ENSCCAG00000033786) #22	ENSCCAG00000033578 #23	CYSTM1 (ENSCCAG00000026489) #24	IGIP (ENSCCAG00000019928) #25	NRG2 (ENSCCAG00000022353) #26	PSD2 (ENSCCAG00000023879) #27	CXXC5 (ENSCCAG00000035206) #28	ENSCCAG00000025425 #29	STING1 (ENSCCAG00000013111) #30	SMIM33 (ENSCCAG00000025433) #31	ECSCR (ENSCCAG00000024982) #32	DNAJC18 (ENSCCAG00000025027) #33	SPATA24 (ENSCCAG00000025443) #34	MZB1 (ENSCCAG00000031417) #36	SLC23A1 (ENSCCAG00000026066) #37	PAIP2 (ENSCCAG00000029791)
Bolivian squirrel monkey	MODERN SPECIES	103	HARS2 (ENSSBOG00000032350) #7	HARS1 (ENSSBOG00000020268) #8	DND1 (ENSSBOG00000027247) #9	WDR55 (ENSSBOG00000020822) #10	IK (ENSSBOG00000026357) #11	NDUFA2 (ENSSBOG00000021588) #12	TMCO6 (ENSSBOG00000029470) #13	CD14 (ENSSBOG00000034070) #14	ENSSBOG00000032306 #15	ENSSBOG00000029254 #16	ENSSBOG00000033106	APBB3 (ENSSBOG00000024294) #18	SRA1 (ENSSBOG00000011756) #19	ANKHD1 (ENSSBOG00000027605) #20	SLC4A9 (ENSSBOG00000030693) #21	HBEGF (ENSSBOG00000030515) #22	PFDN1 (ENSSBOG00000034909) #23	CYSTM1 (ENSSBOG00000002957) #24	IGIP (ENSSBOG00000019044) #25	NRG2 (ENSSBOG00000035692) #26	PSD2 (ENSSBOG00000010713) #27	CXXC5 (ENSSBOG00000035743) #28	UBE2D2 (ENSSBOG00000018320) #29	STING1 (ENSSBOG00000028305) #30	SMIM33 (ENSSBOG00000033265) #31	ECSCR (ENSSBOG00000034274) #32	DNAJC18 (ENSSBOG00000034464) #33	SPATA24 (ENSSBOG00000031837) #34	MZB1 (ENSSBOG00000031455) #36	SLC23A1 (ENSSBOG00000032696) #37	PAIP2 (ENSSBOG00000023790)
Marmoset	MODERN SPECIES	11	HARS1 (ENSCJAG00000016282) #8	DND1 (ENSCJAG00000016345) #9	WDR55 (ENSCJAG00000016359) #10	ENSCJAG00000087247	IK (ENSCJAG00000016366) #11	TMCO6 (ENSCJAG00000016529) #13	CD14 (ENSCJAG00000052964) #14	ENSCJAG00000076026	SLC35A4 (ENSCJAG00000038978)	ENSCJAG00000074508 #16	APBB3 (ENSCJAG00000016553) #18	ENSCJAG00000016613 #19	EIF4EBP3 (ENSCJAG00000041408)	ANKHD1 (ENSCJAG00000016624) #20	SLC4A9 (ENSCJAG00000016762) #21	HBEGF (ENSCJAG00000016803) #22	PFDN1 (ENSCJAG00000043672) #23	CYSTM1 (ENSCJAG00000047318) #24	IGIP (ENSCJAG00000043302) #25	PURA (ENSCJAG00000047468)	NRG2 (ENSCJAG00000016833) #26	PSD2 (ENSCJAG00000016848) #27	CXXC5 (ENSCJAG00000016877) #28	UBE2D2 (ENSCJAG00000063692) #29	STING1 (ENSCJAG00000016886) #30	SMIM33 (ENSCJAG00000016897) #31	ECSCR (ENSCJAG00000041195) #32	DNAJC18 (ENSCJAG00000042703) #33	SPATA24 (ENSCJAG00000007068) #34	PROB1 (ENSCJAG00000040085) #35	MZB1 (ENSCJAG00000007055) #36
Mas night monkey	MODERN SPECIES	966	WDR55 (ENSANAG00000029439) #10	IK (ENSANAG00000037081) #11	ENSANAG00000036345 #12	TMCO6 (ENSANAG00000034193) #13	CD14 (ENSANAG00000034732) #14	ENSANAG00000034215	ENSANAG00000036424 #15	SLC35A4 (ENSANAG00000016426)	ENSANAG00000033588 #16	APBB3 (ENSANAG00000034312) #18	SRA1 (ENSANAG00000020391) #19	ANKHD1 (ENSANAG00000035164) #20	ENSANAG00000035559	ENSANAG00000037215	SLC4A9 (ENSANAG00000035536) #21	HBEGF (ENSANAG00000025689) #22	PFDN1 (ENSANAG00000026284) #23	CYSTM1 (ENSANAG00000036421) #24	IGIP (ENSANAG00000016486) #25	PURA (ENSANAG00000035484)	NRG2 (ENSANAG00000020081) #26	PSD2 (ENSANAG00000036515) #27	CXXC5 (ENSANAG00000037158) #28	ENSANAG00000037235 #29	STING1 (ENSANAG00000037295) #30	SMIM33 (ENSANAG00000020599) #31	ECSCR (ENSANAG00000037645) #32	DNAJC18 (ENSANAG00000021021) #33	SPATA24 (ENSANAG00000037308) #34	MZB1 (ENSANAG00000021075) #36	SLC23A1 (ENSANAG00000021838) #37
Tarsier	MODERN SPECIES	3994										ENSTSYG00000031083 #16	APBB3 (ENSTSYG00000000597) #18	SRA1 (ENSTSYG00000032938) #19	EIF4EBP3 (ENSTSYG00000028184)	ANKHD1 (ENSTSYG00000003323) #20	SLC4A9 (ENSTSYG00000001886) #21	HBEGF (ENSTSYG00000011598) #22	PFDN1 (ENSTSYG00000014486) #23	CYSTM1 (ENSTSYG00000037025) #24	IGIP (ENSTSYG00000008348) #25	PURA (ENSTSYG00000013362)	ENSTSYG00000032110 #26	PSD2 (ENSTSYG00000034456) #27	CXXC5 (ENSTSYG00000037211) #28
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Lemuriformes	ANCESTRAL SPECIES	21	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.d #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Lemuriformes_a	ANCESTRAL SPECIES	13	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.d #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Greater bamboo lemur	MODERN SPECIES	284	ZMAT2 (ENSPSMG00000020699)	HARS2 (ENSPSMG00000020485) #7	HARS1 (ENSPSMG00000020199) #8	DND1 (ENSPSMG00000020048) #9	WDR55 (ENSPSMG00000020043) #10	IK (ENSPSMG00000020005) #11	NDUFA2 (ENSPSMG00000019873) #12	TMCO6 (ENSPSMG00000019851) #13	CD14 (ENSPSMG00000019788) #14	SLC35A4 (ENSPSMG00000019766)	ENSPSMG00000019763 #16	APBB3 (ENSPSMG00000019682) #18	SRA1 (ENSPSMG00000019602) #19	ANKHD1 (ENSPSMG00000019505) #20	SLC4A9 (ENSPSMG00000019289) #21	HBEGF (ENSPSMG00000019274) #22	PFDN1 (ENSPSMG00000019270) #23	ENSPSMG00000019259 #24	IGIP (ENSPSMG00000019257) #25	PURA (ENSPSMG00000019255)	NRG2 (ENSPSMG00000019250) #26	PSD2 (ENSPSMG00000019232) #27	CXXC5 (ENSPSMG00000019211) #28	UBE2D2 (ENSPSMG00000019180) #29	STING1 (ENSPSMG00000019134) #30	ECSCR (ENSPSMG00000019126) #32	DNAJC18 (ENSPSMG00000019119) #33	SPATA24 (ENSPSMG00000019106) #34	PROB1 (ENSPSMG00000019083) #35	MZB1 (ENSPSMG00000019080) #36	SLC23A1 (ENSPSMG00000019073) #37
Coquerels sifaka	MODERN SPECIES	349															SLC4A9 (ENSPCOG00000027757) #21	HBEGF (ENSPCOG00000014230) #22	PFDN1 (ENSPCOG00000018315) #23	ENSPCOG00000024063 #24	IGIP (ENSPCOG00000026657) #25	NRG2 (ENSPCOG00000023629) #26	PSD2 (ENSPCOG00000015524) #27	CXXC5 (ENSPCOG00000022700) #28	ENSPCOG00000013280 #29	STING1 (ENSPCOG00000012945) #30	ECSCR (ENSPCOG00000028716) #32	DNAJC18 (ENSPCOG00000019241) #33	SPATA24 (ENSPCOG00000027871) #34	MZB1 (ENSPCOG00000025186) #36	SLC23A1 (ENSPCOG00000010336) #37	PAIP2 (ENSPCOG00000027792)	MATR3 (ENSPCOG00000025718)
Mouse lemur	MODERN SPECIES	10	PCDHAC2 (ENSMICG00000034226)	ZMAT2 (ENSMICG00000042843)	HARS2 (ENSMICG00000014100) #7	HARS1 (ENSMICG00000014087) #8	DND1 (ENSMICG00000029187) #9	WDR55 (ENSMICG00000045324) #10	IK (ENSMICG00000014045) #11	NDUFA2 (ENSMICG00000047730) #12	TMCO6 (ENSMICG00000014064) #13	CD14 (ENSMICG00000037582) #14	ENSMICG00000036280 #16	APBB3 (ENSMICG00000000372) #18	SRA1 (ENSMICG00000044059) #19	ANKHD1 (ENSMICG00000000358) #20	SLC4A9 (ENSMICG00000000352) #21	HBEGF (ENSMICG00000047446) #22	PFDN1 (ENSMICG00000043564) #23	CYSTM1 (ENSMICG00000047794) #24	IGIP (ENSMICG00000014785) #25	NRG2 (ENSMICG00000029845) #26	PSD2 (ENSMICG00000012647) #27	CXXC5 (ENSMICG00000002899) #28	ENSMICG00000047119 #29	STING1 (ENSMICG00000030295) #30	ENSMICG00000027607	ECSCR (ENSMICG00000029366) #32	DNAJC18 (ENSMICG00000012529) #33	SPATA24 (ENSMICG00000012514) #34	MZB1 (ENSMICG00000034376) #36	SLC23A1 (ENSMICG00000012457) #37	PAIP2 (ENSMICG00000012451)
Bushbaby	MODERN SPECIES	118	PCDHA2 (ENSOGAG00000029087)	ZMAT2 (ENSOGAG00000002054)	HARS2 (ENSOGAG00000002052) #7	HARS1 (ENSOGAG00000002050) #8	DND1 (ENSOGAG00000033318) #9	WDR55 (ENSOGAG00000033796) #10	IK (ENSOGAG00000014281) #11	NDUFA2 (ENSOGAG00000027727) #12	TMCO6 (ENSOGAG00000014285) #13	CD14 (ENSOGAG00000014280) #14	SLC35A4 (ENSOGAG00000032808)	APBB3 (ENSOGAG00000014274) #18	SRA1 (ENSOGAG00000025549) #19	ANKHD1 (ENSOGAG00000014263) #20	SLC4A9 (ENSOGAG00000003589) #21	HBEGF (ENSOGAG00000003377) #22	ENSOGAG00000003376 #23	CYSTM1 (ENSOGAG00000003374) #24	IGIP (ENSOGAG00000003373) #25	PURA (ENSOGAG00000003372)	NRG2 (ENSOGAG00000031618) #26	PSD2 (ENSOGAG00000013987) #27	CXXC5 (ENSOGAG00000024233) #28	ENSOGAG00000028919	STING1 (ENSOGAG00000009787) #30	ECSCR (ENSOGAG00000026640) #32	SPATA24 (ENSOGAG00000010620) #34	ENSOGAG00000010617 #35	MZB1 (ENSOGAG00000024725) #36	SLC23A1 (ENSOGAG00000010614) #37	PAIP2 (ENSOGAG00000010612)
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Tree shrew	MODERN SPECIES	862							ENSTBEG00000007828	HARS2 (ENSTBEG00000007467) #7	HARS1 (ENSTBEG00000006968) #8	DND1 (ENSTBEG00000006754) #9	WDR55 (ENSTBEG00000006347) #10	NDUFA2 (ENSTBEG00000005978) #12	ENSTBEG00000005500 #13	ANKHD1 (ENSTBEG00000003619) #20	SLC4A9 (ENSTBEG00000002352) #21	HBEGF (ENSTBEG00000001725) #22	CYSTM1 (ENSTBEG00000001488) #24
Glires	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Lagomorpha	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Pika	MODERN SPECIES	1964								NDUFA2 (ENSOPRG00000006769) #12	TMCO6 (ENSOPRG00000006762) #13	IK (ENSOPRG00000006749) #11	SLC35A4 (ENSOPRG00000006739)	APBB3 (ENSOPRG00000006714) #18	SRA1 (ENSOPRG00000018381) #19	ANKHD1 (ENSOPRG00000006675) #20	SLC4A9 (ENSOPRG00000006654) #21	HBEGF (ENSOPRG00000006641) #22	PFDN1 (ENSOPRG00000006633) #23	IGIP (ENSOPRG00000006628) #25	PSD2 (ENSOPRG00000006601) #27
Rabbit	MODERN SPECIES	14	HARS2 (ENSOCUG00000004250) #7	HARS1 (ENSOCUG00000004243) #8	DND1 (ENSOCUG00000004240) #9	WDR55 (ENSOCUG00000026709) #10	IK (ENSOCUG00000004223) #11	NDUFA2 (ENSOCUG00000004237) #12	TMCO6 (ENSOCUG00000004236) #13	CD14 (ENSOCUG00000004218) #14	SLC35A4 (ENSOCUG00000009816)	ENSOCUG00000032814 #16	APBB3 (ENSOCUG00000009817) #18	ENSOCUG00000021569 #19	EIF4EBP3 (ENSOCUG00000034094)	ANKHD1 (ENSOCUG00000015943) #20	SLC4A9 (ENSOCUG00000015920) #21	HBEGF (ENSOCUG00000015909) #22	PFDN1 (ENSOCUG00000009432) #23	CYSTM1 (ENSOCUG00000021088) #24	IGIP (ENSOCUG00000037193) #25	PURA (ENSOCUG00000011120)	ENSOCUG00000024471 #26	PSD2 (ENSOCUG00000026563) #27	ENSOCUG00000029448 #29	STING1 (ENSOCUG00000006958) #30	SMIM33 (ENSOCUG00000026039) #31	ECSCR (ENSOCUG00000023976) #32	DNAJC18 (ENSOCUG00000006955) #33	SPATA24 (ENSOCUG00000006952) #34	PROB1 (ENSOCUG00000006947) #35	MZB1 (ENSOCUG00000006942) #36	SLC23A1 (ENSOCUG00000006934) #37
Rodentia	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Kangaroo rat	MODERN SPECIES	369	Pcdha3 (ENSDORG00000026940)	Zmat2 (ENSDORG00000014559)	Hars2 (ENSDORG00000014555) #7	Hars (ENSDORG00000014553) #8	Dnd1 (ENSDORG00000014552) #9	Wdr55 (ENSDORG00000014551) #10	ENSDORG00000006584 #11	Ndufa2 (ENSDORG00000006581) #12	Tmco6 (ENSDORG00000006580) #13	Slc35a4 (ENSDORG00000001165)	ENSDORG00000025601 #16	Apbb3 (ENSDORG00000001164) #18	Ankhd1 (ENSDORG00000001160) #20	Slc4a9 (ENSDORG00000012541) #21	ENSDORG00000024160	Hbegf (ENSDORG00000012536) #22	Pfdn1 (ENSDORG00000028430) #23	Cystm1 (ENSDORG00000025347) #24	Igip (ENSDORG00000024838) #25	Pura (ENSDORG00000008317)	ENSDORG00000002385 #26	Psd2 (ENSDORG00000005492) #27	Cxxc5 (ENSDORG00000023455) #28	Dnajc18 (ENSDORG00000011969) #33	Spata24 (ENSDORG00000002285) #34	Slc23a1 (ENSDORG00000002270) #37	Paip2 (ENSDORG00000025290)	ENSDORG00000003429	Sil1 (ENSDORG00000006159)	ENSDORG00000029662	Ctnna1 (ENSDORG00000010013)
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Lesser Egyptian jerboa	MODERN SPECIES	48	Hars (ENSJJAG00000022965) #8	Dnd1 (ENSJJAG00000023986) #9	Wdr55 (ENSJJAG00000023700) #10	Ik (ENSJJAG00000000529) #11	Ndufa2 (ENSJJAG00000023853) #12	Tmco6 (ENSJJAG00000024300) #13	Cd14 (ENSJJAG00000012492) #14	E230025N22Rik (ENSJJAG00000022274)	Slc35a4 (ENSJJAG00000005636)	ENSJJAG00000021749 #16	Apbb3 (ENSJJAG00000000643) #18	Sra1 (ENSJJAG00000014326) #19	Eif4ebp3 (ENSJJAG00000016625)	Ankhd1 (ENSJJAG00000017997) #20	Slc4a9 (ENSJJAG00000001802) #21	Hbegf (ENSJJAG00000011256) #22	ENSJJAG00000024321 #23	Cystm1 (ENSJJAG00000003269) #24	Pura (ENSJJAG00000015109)	ENSJJAG00000016221 #26	Psd2 (ENSJJAG00000010081) #27	Cxxc5 (ENSJJAG00000022719) #28	Ube2d2a (ENSJJAG00000014489) #29	Sting1 (ENSJJAG00000012108) #30	Smim33 (ENSJJAG00000023963) #31	Ecscr (ENSJJAG00000023735) #32	Dnajc18 (ENSJJAG00000005322) #33	Spata24 (ENSJJAG00000022200) #34	Prob1 (ENSJJAG00000017932) #35	Mzb1 (ENSJJAG00000020008) #36	Slc23a1 (ENSJJAG00000018874) #37
Muroidea	ANCESTRAL SPECIES	4	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Muroidea_A	ANCESTRAL SPECIES	18	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Cricetidae	ANCESTRAL SPECIES	18	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a.b #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Cricetinae	ANCESTRAL SPECIES	14	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a.b #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Golden Hamster	MODERN SPECIES	619															Slc4a9 (ENSMAUG00000018095) #21	Hbegf (ENSMAUG00000001210) #22	ENSMAUG00000009444	ENSMAUG00000010575	Cystm1 (ENSMAUG00000020526) #24	Igip (ENSMAUG00000006054) #25	Pura (ENSMAUG00000011024)	ENSMAUG00000010710 #26	ENSMAUG00000015369	Psd2 (ENSMAUG00000016332) #27	Cxxc5 (ENSMAUG00000015581) #28	Ube2d2a (ENSMAUG00000009230) #29	Sting1 (ENSMAUG00000019161) #30	Smim33 (ENSMAUG00000008798) #31	Ecscr (ENSMAUG00000021134) #32	Dnajc18 (ENSMAUG00000001327) #33	Spata24 (ENSMAUG00000019828) #34
Chinese hamster chok1gshd	MODERN SPECIES	92	Wdr55 (ENSCGRG00001014049) #10	ENSCGRG00001008041 #11	ENSCGRG00001022607 #12	Tmco6 (ENSCGRG00001014120) #13	Cd14 (ENSCGRG00001007873) #14	ENSCGRG00001005508	E230025N22Rik (ENSCGRG00001005820)	Slc35a4 (ENSCGRG00001003358)	ENSCGRG00001014343 #16	Apbb3 (ENSCGRG00001019043) #18	Eif4ebp3 (ENSCGRG00001014184)	Sra1 (ENSCGRG00001005557) #19	Ankhd1 (ENSCGRG00001015164) #20	ENSCGRG00001007247	Slc4a9 (ENSCGRG00001020810) #21	Hbegf (ENSCGRG00001016485) #22	Pfdn1 (ENSCGRG00001021593) #23	Cystm1 (ENSCGRG00001020601) #24	Igip (ENSCGRG00001005066) #25	Pura (ENSCGRG00001005040)	Nrg2 (ENSCGRG00001024076) #26	Psd2 (ENSCGRG00001015035) #27	Cxxc5 (ENSCGRG00001023419) #28	Ube2d2a (ENSCGRG00001017664) #29	Sting1 (ENSCGRG00001021519) #30	Smim33 (ENSCGRG00001019017) #31	Ecscr (ENSCGRG00001013873) #32	ENSCGRG00001009582	Dnajc18 (ENSCGRG00001014703) #33	Spata24 (ENSCGRG00001013023) #34	Prob1 (ENSCGRG00001003909) #35
Cricetidae_B	ANCESTRAL SPECIES	15	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a.b #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Northern American deer mouse	MODERN SPECIES	10	ENSPEMG00000026907 #9	ENSPEMG00000024534 #10	Hars (ENSPEMG00000007577) #8	ENSPEMG00000026826 #9	Wdr55 (ENSPEMG00000017600) #10	Ik (ENSPEMG00000012214) #11	Tmco6 (ENSPEMG00000007871) #13	E230025N22Rik (ENSPEMG00000012125)	Slc35a4 (ENSPEMG00000028615)	ENSPEMG00000027066 #16	Apbb3 (ENSPEMG00000013849) #18	Sra1 (ENSPEMG00000000489) #19	Eif4ebp3 (ENSPEMG00000030655)	Ankhd1 (ENSPEMG00000022614) #20	Slc4a9 (ENSPEMG00000010356) #21	Hbegf (ENSPEMG00000000469) #22	Pfdn1 (ENSPEMG00000025003) #23	Cystm1 (ENSPEMG00000025062) #24	Igip (ENSPEMG00000004181) #25	Pura (ENSPEMG00000031121)	Nrg2 (ENSPEMG00000025736) #26	Psd2 (ENSPEMG00000021696) #27	Cxxc5 (ENSPEMG00000023509) #28	ENSPEMG00000031379 #29	Sting1 (ENSPEMG00000021208) #30	Smim33 (ENSPEMG00000021312) #31	Ecscr (ENSPEMG00000021031) #32	Dnajc18 (ENSPEMG00000010316) #33	Spata24 (ENSPEMG00000021543) #34	Prob1 (ENSPEMG00000020881) #35	Mzb1 (ENSPEMG00000026427) #36
Prairie vole	MODERN SPECIES	5	Hars2 (ENSMOCG00000013944) #7	Hars (ENSMOCG00000021826) #8	Dnd1 (ENSMOCG00000018076) #9	Wdr55 (ENSMOCG00000015796) #10	Ik (ENSMOCG00000021915) #11	Ndufa2 (ENSMOCG00000022078) #12	Tmco6 (ENSMOCG00000019750) #13	Cd14 (ENSMOCG00000007005) #14	E230025N22Rik (ENSMOCG00000020033)	Slc35a4 (ENSMOCG00000015009)	Apbb3 (ENSMOCG00000018381) #18	Sra1 (ENSMOCG00000008156) #19	Eif4ebp3 (ENSMOCG00000021408)	Ankhd1 (ENSMOCG00000009220) #20	Slc4a9 (ENSMOCG00000001504) #21	Hbegf (ENSMOCG00000011201) #22	Pfdn1 (ENSMOCG00000016407) #23	Cystm1 (ENSMOCG00000003921) #24	Pura (ENSMOCG00000008839)	Nrg2 (ENSMOCG00000011511) #26	Psd2 (ENSMOCG00000007157) #27	Cxxc5 (ENSMOCG00000020209) #28	ENSMOCG00000012967	Ube2d2a (ENSMOCG00000020406) #29	Sting1 (ENSMOCG00000009944) #30	Smim33 (ENSMOCG00000013513) #31	Ecscr (ENSMOCG00000020391) #32	Dnajc18 (ENSMOCG00000013976) #33	Spata24 (ENSMOCG00000002448) #34	Prob1 (ENSMOCG00000014123) #35	Mzb1 (ENSMOCG00000001507) #36
Murinae	ANCESTRAL SPECIES	17	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Mus	ANCESTRAL SPECIES	19	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Mus_A	ANCESTRAL SPECIES	19	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Mus_B	ANCESTRAL SPECIES	19	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Mouse	MODERN SPECIES	9	Hars (ENSMUSG00000001380) #8	Dnd1 (ENSMUSG00000044595) #9	Wdr55 (ENSMUSG00000042660) #10	Ik (ENSMUSG00000024474) #11	Ndufa2 (ENSMUSG00000014294) #12	Tmco6 (ENSMUSG00000006850) #13	Cd14 (ENSMUSG00000051439) #14	E230025N22Rik (ENSMUSG00000044719)	Slc35a4 (ENSMUSG00000033272)	Apbb3 (ENSMUSG00000117679) #18	Sra1 (ENSMUSG00000006050) #19	Eif4ebp3 (ENSMUSG00000090264)	Maskbp3 (ENSMUSG00000117942)	Ankhd1 (ENSMUSG00000024483) #20	Slc4a9 (ENSMUSG00000024485) #21	Hbegf (ENSMUSG00000024486) #22	Pfdn1 (ENSMUSG00000024346) #23	Cystm1 (ENSMUSG00000046727) #24	Igip (ENSMUSG00000110185) #25	Pura (ENSMUSG00000043991)	Nrg2 (ENSMUSG00000060275) #26	Psd2 (ENSMUSG00000024347) #27	Cxxc5 (ENSMUSG00000046668) #28	Ube2d2a (ENSMUSG00000091896) #29	Sting1 (ENSMUSG00000024349) #30	Ecscr (ENSMUSG00000073599) #32	Smim33 (ENSMUSG00000073598) #31	Dnajc18 (ENSMUSG00000024350) #33	Spata24 (ENSMUSG00000024352) #34	Prob1 (ENSMUSG00000073600) #35	Mzb1 (ENSMUSG00000024353) #36
Mus_C	ANCESTRAL SPECIES	16	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Steppe mouse	MODERN SPECIES	2841	Dnd1 (ENSMSIG00000031684) #9	Wdr55 (ENSMSIG00000031682) #10	Ik (ENSMSIG00000031680) #11	Ndufa2 (ENSMSIG00000031679) #12	Tmco6 (ENSMSIG00000031677) #13	Cd14 (ENSMSIG00000031676) #14	E230025N22Rik (ENSMSIG00000031672)	Slc35a4 (ENSMSIG00000031671)	ENSMSIG00000031668 #16	Apbb3 (ENSMSIG00000031665) #18	Eif4ebp3 (ENSMSIG00000031654)	ENSMSIG00000031651 #19	ENSMSIG00000031650	Ankhd1 (ENSMSIG00000029982) #20	Slc4a9 (ENSMSIG00000029951) #21	Hbegf (ENSMSIG00000029937) #22	ENSMSIG00000029932 #23	Cystm1 (ENSMSIG00000029924) #24	Igip (ENSMSIG00000029918) #25	Pura (ENSMSIG00000029915)	Nrg2 (ENSMSIG00000029870) #26	Psd2 (ENSMSIG00000029845) #27	Cxxc5 (ENSMSIG00000029839) #28
spretus	MODERN SPECIES	9	Zmat2 (MGP_SPRETEiJ_G0023052)	Hars2 (MGP_SPRETEiJ_G0023051) #7	Hars (MGP_SPRETEiJ_G0023050) #8	Dnd1 (MGP_SPRETEiJ_G0023049) #9	Wdr55 (MGP_SPRETEiJ_G0023048) #10	Ik (MGP_SPRETEiJ_G0023047) #11	Ndufa2 (MGP_SPRETEiJ_G0023046) #12	Tmco6 (MGP_SPRETEiJ_G0023045) #13	Cd14 (MGP_SPRETEiJ_G0023044) #14	E230025N22Rik (MGP_SPRETEiJ_G0023043)	MGP_SPRETEiJ_G0023042	Apbb3 (MGP_SPRETEiJ_G0023041) #18	Eif4ebp3 (MGP_SPRETEiJ_G0023040)	Ankhd1 (MGP_SPRETEiJ_G0023039) #20	Slc4a9 (MGP_SPRETEiJ_G0023038) #21	Hbegf (MGP_SPRETEiJ_G0023037) #22	Pfdn1 (MGP_SPRETEiJ_G0023036) #23	Cystm1 (MGP_SPRETEiJ_G0023035) #24	Pura (MGP_SPRETEiJ_G0023034)	Nrg2 (MGP_SPRETEiJ_G0023033) #26	Psd2 (MGP_SPRETEiJ_G0023032) #27	Cxxc5 (MGP_SPRETEiJ_G0023031) #28	Ube2d2a (MGP_SPRETEiJ_G0023030) #29	Sting1 (MGP_SPRETEiJ_G0023029) #30	Ecscr (MGP_SPRETEiJ_G0023028) #32	Smim33 (MGP_SPRETEiJ_G0023027) #31	Dnajc18 (MGP_SPRETEiJ_G0023026) #33	Spata24 (MGP_SPRETEiJ_G0023025) #34	Prob1 (MGP_SPRETEiJ_G0023024) #35	Mzb1 (MGP_SPRETEiJ_G0023023) #36	Slc23a1 (MGP_SPRETEiJ_G0023022) #37
Ryukyu mouse	MODERN SPECIES	9	Zmat2 (MGP_CAROLIEiJ_G0022140)	Hars2 (MGP_CAROLIEiJ_G0022139) #7	Hars (MGP_CAROLIEiJ_G0022138) #8	Dnd1 (MGP_CAROLIEiJ_G0022137) #9	Wdr55 (MGP_CAROLIEiJ_G0022136) #10	Ik (MGP_CAROLIEiJ_G0022135) #11	Ndufa2 (MGP_CAROLIEiJ_G0022134) #12	Tmco6 (MGP_CAROLIEiJ_G0022133) #13	Cd14 (MGP_CAROLIEiJ_G0022132) #14	E230025N22Rik (MGP_CAROLIEiJ_G0022131)	Slc35a4 (MGP_CAROLIEiJ_G0022130)	Apbb3 (MGP_CAROLIEiJ_G0022129) #18	Eif4ebp3 (MGP_CAROLIEiJ_G0022128)	Ankhd1 (MGP_CAROLIEiJ_G0022127) #20	Slc4a9 (MGP_CAROLIEiJ_G0022126) #21	Hbegf (MGP_CAROLIEiJ_G0022125) #22	Pfdn1 (MGP_CAROLIEiJ_G0022124) #23	Cystm1 (MGP_CAROLIEiJ_G0022123) #24	Pura (MGP_CAROLIEiJ_G0022122)	Nrg2 (MGP_CAROLIEiJ_G0022121) #26	Psd2 (MGP_CAROLIEiJ_G0022120) #27	Cxxc5 (MGP_CAROLIEiJ_G0022119) #28	Ube2d2a (MGP_CAROLIEiJ_G0022118) #29	Sting1 (MGP_CAROLIEiJ_G0022117) #30	Ecscr (MGP_CAROLIEiJ_G0022116) #32	Smim33 (MGP_CAROLIEiJ_G0022115) #31	Dnajc18 (MGP_CAROLIEiJ_G0022114) #33	Spata24 (MGP_CAROLIEiJ_G0022113) #34	Prob1 (MGP_CAROLIEiJ_G0022112) #35	Mzb1 (MGP_CAROLIEiJ_G0022111) #36	Slc23a1 (MGP_CAROLIEiJ_G0022110) #37
Shrew mouse	MODERN SPECIES	6	Zmat2 (MGP_PahariEiJ_G0018874)	Hars2 (MGP_PahariEiJ_G0018873) #7	Hars (MGP_PahariEiJ_G0018872) #8	Dnd1 (MGP_PahariEiJ_G0018871) #9	Wdr55 (MGP_PahariEiJ_G0018870) #10	Ik (MGP_PahariEiJ_G0018869) #11	Ndufa2 (MGP_PahariEiJ_G0018868) #12	Tmco6 (MGP_PahariEiJ_G0018867) #13	Cd14 (MGP_PahariEiJ_G0018866) #14	E230025N22Rik (MGP_PahariEiJ_G0018865)	Slc35a4 (MGP_PahariEiJ_G0018864)	Apbb3 (MGP_PahariEiJ_G0018863) #18	Eif4ebp3 (MGP_PahariEiJ_G0018862)	Ankhd1 (MGP_PahariEiJ_G0018861) #20	Slc4a9 (MGP_PahariEiJ_G0018860) #21	Hbegf (MGP_PahariEiJ_G0018859) #22	Pfdn1 (MGP_PahariEiJ_G0018858) #23	Cystm1 (MGP_PahariEiJ_G0018857) #24	Pura (MGP_PahariEiJ_G0018856)	Nrg2 (MGP_PahariEiJ_G0018855) #26	Psd2 (MGP_PahariEiJ_G0018854) #27	Cxxc5 (MGP_PahariEiJ_G0018853) #28	Ube2d2a (MGP_PahariEiJ_G0018852) #29	Sting1 (MGP_PahariEiJ_G0018851) #30	MGP_PahariEiJ_G0018850 #32	Smim33 (MGP_PahariEiJ_G0018849) #31	Dnajc18 (MGP_PahariEiJ_G0018848) #33	Spata24 (MGP_PahariEiJ_G0018847) #34	Prob1 (MGP_PahariEiJ_G0018846) #35	Mzb1 (MGP_PahariEiJ_G0018845) #36	Slc23a1 (MGP_PahariEiJ_G0018844) #37
Rat	MODERN SPECIES	9	Pcdha5 (ENSRNOG00000020119)	Zmat2 (ENSRNOG00000016087) #7	Hars1 (ENSRNOG00000028105) #8	Dnd1 (ENSRNOG00000016894) #9	Wdr55 (ENSRNOG00000017251) #10	Ndufa2 (ENSRNOG00000017571) #12	Tmco6 (ENSRNOG00000017718) #13	Cd14 (ENSRNOG00000017819) #14	ENSRNOG00000064875	RGD1565779 (ENSRNOG00000066557)	Slc35a4 (ENSRNOG00000002908)	Apbb3 (ENSRNOG00000017849) #18	Sra1 (ENSRNOG00000018089) #19	Eif4ebp3 (ENSRNOG00000030247) #20	Slc4a9 (ENSRNOG00000018525) #21	Hbegf (ENSRNOG00000018646) #22	Pfdn1 (ENSRNOG00000018653) #23	Cystm1 (ENSRNOG00000018775)	Pura (ENSRNOG00000062721)	Nrg2 (ENSRNOG00000019093) #26	Psd2 (ENSRNOG00000019177) #27	ENSRNOG00000065110	Cxxc5 (ENSRNOG00000032878) #28	Ube2d2 (ENSRNOG00000069286) #29	Sting1 (ENSRNOG00000042137) #30	1700066B19Rik (ENSRNOG00000066011) #31	Ecscr (ENSRNOG00000039593) #32	Dnajc18 (ENSRNOG00000019995) #33	Spata24 (ENSRNOG00000019976) #34	Prob1 (ENSRNOG00000039596) #35	Mzb1 (ENSRNOG00000022009) #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1255													ENSNGAG00000020781 #20	ENSNGAG00000000266	Slc4a9 (ENSNGAG00000008987) #21	Hbegf (ENSNGAG00000006544) #22	ENSNGAG00000010693 #23	Cystm1 (ENSNGAG00000013324) #24	Igip (ENSNGAG00000016182) #25	Pura (ENSNGAG00000014024)	ENSNGAG00000017077 #26	Psd2 (ENSNGAG00000007846) #27	Cxxc5 (ENSNGAG00000015324) #28	Ube2d2a (ENSNGAG00000016061) #29	Sting1 (ENSNGAG00000016454) #30	Smim33 (ENSNGAG00000015214) #31	Ecscr (ENSNGAG00000016290) #32	Dnajc18 (ENSNGAG00000021334) #33	Spata24 (ENSNGAG00000017417) #34	Prob1 (ENSNGAG00000019242) #35	Mzb1 (ENSNGAG00000003306) #36
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Sciuridae	ANCESTRAL SPECIES	18	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Eurasian red squirrel	MODERN SPECIES	15	HARS2 (ENSSVLG00005020869) #7	HARS1 (ENSSVLG00005021378) #8	DND1 (ENSSVLG00005021541) #9	WDR55 (ENSSVLG00005021589) #10	IK (ENSSVLG00005021647) #11	ENSSVLG00005021813 #12	TMCO6 (ENSSVLG00005021859) #13	CD14 (ENSSVLG00005022015) #14	SLC35A4 (ENSSVLG00005022047)	ENSSVLG00005022063 #16	APBB3 (ENSSVLG00005022127) #18	SRA1 (ENSSVLG00005022207) #19	EIF4EBP3 (ENSSVLG00005022238)	ANKHD1 (ENSSVLG00005022311) #20	SLC4A9 (ENSSVLG00005022479) #21	HBEGF (ENSSVLG00005022906) #22	PFDN1 (ENSSVLG00005022935) #23	CYSTM1 (ENSSVLG00005022955) #24	IGIP (ENSSVLG00005022977) #25	PURA (ENSSVLG00005022991)	NRG2 (ENSSVLG00005023050) #26	PSD2 (ENSSVLG00005023287) #27	ENSSVLG00005023435 #29	ENSSVLG00005011040	STING1 (ENSSVLG00005011094) #30	SMIM33 (ENSSVLG00005011228) #31	ENSSVLG00005011279 #32	DNAJC18 (ENSSVLG00005011344) #33	SPATA24 (ENSSVLG00005011391) #34	MZB1 (ENSSVLG00005011633) #36	SLC23A1 (ENSSVLG00005011703) #37
Marmotini	ANCESTRAL SPECIES	23	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.fb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Alpin marmot	MODERN SPECIES		ZMAT2 (ENSMMMG00000010817)	HARS2 (ENSMMMG00000010764) #7	HARS1 (ENSMMMG00000010747) #8	DND1 (ENSMMMG00000010736) #9	WDR55 (ENSMMMG00000010722) #10	IK (ENSMMMG00000010705) #11	ENSMMMG00000010699 #12	TMCO6 (ENSMMMG00000010677) #13	CD14 (ENSMMMG00000010676) #14	SLC35A4 (ENSMMMG00000010659)	ENSMMMG00000010657 #16	APBB3 (ENSMMMG00000010626) #18	EIF4EBP3 (ENSMMMG00000010610)	ANKHD1 (ENSMMMG00000010548) #20	SLC4A9 (ENSMMMG00000010288) #21	HBEGF (ENSMMMG00000010280) #22	PFDN1 (ENSMMMG00000010271) #23	CYSTM1 (ENSMMMG00000010221) #24	IGIP (ENSMMMG00000010213) #25	PSD2 (ENSMMMG00000010078) #27	CXXC5 (ENSMMMG00000010012) #28	UBE2D2 (ENSMMMG00000009995) #29	STING1 (ENSMMMG00000009971) #30	SMIM33 (ENSMMMG00000009962) #31	DNAJC18 (ENSMMMG00000009945) #33	SPATA24 (ENSMMMG00000009882) #34	PROB1 (ENSMMMG00000009879) #35	MZB1 (ENSMMMG00000009863) #36	SLC23A1 (ENSMMMG00000009848) #37	ENSMMMG00000009828	MATR3 (ENSMMMG00000009767)
Marmotini_b	ANCESTRAL SPECIES	16	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.fb #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Squirrel	MODERN SPECIES	131	HARS2 (ENSSTOG00000002016) #7	HARS1 (ENSSTOG00000002007) #8	DND1 (ENSSTOG00000002000) #9	WDR55 (ENSSTOG00000024223) #10	IK (ENSSTOG00000001980) #11	ENSSTOG00000022532 #12	TMCO6 (ENSSTOG00000028988) #13	CD14 (ENSSTOG00000001977) #14	SLC35A4 (ENSSTOG00000026149)	ENSSTOG00000032302 #16	APBB3 (ENSSTOG00000001965) #18	SRA1 (ENSSTOG00000024229) #19	EIF4EBP3 (ENSSTOG00000020350)	ANKHD1 (ENSSTOG00000001936) #20	SLC4A9 (ENSSTOG00000001919) #21	HBEGF (ENSSTOG00000028116) #22	PFDN1 (ENSSTOG00000001913) #23	CYSTM1 (ENSSTOG00000001912) #24	IGIP (ENSSTOG00000019598) #25	PURA (ENSSTOG00000000092)	NRG2 (ENSSTOG00000024639) #26	PSD2 (ENSSTOG00000002517) #27	CXXC5 (ENSSTOG00000025994) #28	UBE2D2 (ENSSTOG00000013481) #29	STING1 (ENSSTOG00000027444) #30	SMIM33 (ENSSTOG00000014784) #31	ECSCR (ENSSTOG00000028250) #32	DNAJC18 (ENSSTOG00000024870) #33	SPATA24 (ENSSTOG00000026647) #34	PROB1 (ENSSTOG00000020198) #35	MZB1 (ENSSTOG00000025710) #36
Arctic ground squirrel	MODERN SPECIES	29	HARS2 (ENSUPAG00010007685) #7	HARS1 (ENSUPAG00010007659) #8	DND1 (ENSUPAG00010007650) #9	WDR55 (ENSUPAG00010007647) #10	IK (ENSUPAG00010007621) #11	ENSUPAG00010007617 #12	TMCO6 (ENSUPAG00010007603) #13	CD14 (ENSUPAG00010007599) #14	SLC35A4 (ENSUPAG00010007573)	ENSUPAG00010007570 #16	APBB3 (ENSUPAG00010007552) #18	SRA1 (ENSUPAG00010007542) #19	EIF4EBP3 (ENSUPAG00010007533)	ANKHD1 (ENSUPAG00010007490) #20	SLC4A9 (ENSUPAG00010007028) #21	HBEGF (ENSUPAG00010007010) #22	PFDN1 (ENSUPAG00010007002) #23
Hystricomorpha	ANCESTRAL SPECIES	27	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Hystricomorpha_a	ANCESTRAL SPECIES	24	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Guinea pig	MODERN SPECIES	6	HARS1 (ENSCPOG00000009197) #8	DND1 (ENSCPOG00000009192) #9	WDR55 (ENSCPOG00000009190) #10	IK (ENSCPOG00000009179) #11	NDUFA2 (ENSCPOG00000009178) #12	TMCO6 (ENSCPOG00000009172) #13	CD14 (ENSCPOG00000025223) #14	ENSCPOG00000024495	SLC35A4 (ENSCPOG00000006402)	ENSCPOG00000031899 #16	APBB3 (ENSCPOG00000006384) #18	SRA1 (ENSCPOG00000020210) #19	EIF4EBP3 (ENSCPOG00000033979)	ANKHD1 (ENSCPOG00000011805) #20	SLC4A9 (ENSCPOG00000010350) #21	HBEGF (ENSCPOG00000010345) #22	PFDN1 (ENSCPOG00000026810) #23	CYSTM1 (ENSCPOG00000030907) #24	NRG2 (ENSCPOG00000020136) #26	PSD2 (ENSCPOG00000000154) #27	CXXC5 (ENSCPOG00000001156) #28	UBE2D2 (ENSCPOG00000032005) #29	STING1 (ENSCPOG00000034887) #30	SMIM33 (ENSCPOG00000003071) #31	ENSCPOG00000024371 #32	DNAJC18 (ENSCPOG00000021935) #33	SPATA24 (ENSCPOG00000033082) #34	PROB1 (ENSCPOG00000035933) #35	MZB1 (ENSCPOG00000032846) #36	SLC23A1 (ENSCPOG00000014082) #37	PAIP2 (ENSCPOG00000031609)
Hystricomorpha_b	ANCESTRAL SPECIES	50	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Degu	MODERN SPECIES	210	ENSODEG00000003591 #9	WDR55 (ENSODEG00000003673) #10	ENSODEG00000003854 #11	ENSODEG00000003215 #12	TMCO6 (ENSODEG00000003263) #13	CD14 (ENSODEG00000003404) #14	ENSODEG00000003419	SLC35A4 (ENSODEG00000018919)	ENSODEG00000003539 #16	ENSODEG00000003982 #18	SRA1 (ENSODEG00000003997) #19	EIF4EBP3 (ENSODEG00000004026)	ANKHD1 (ENSODEG00000002733) #20	ENSODEG00000002830	SLC4A9 (ENSODEG00000002886) #21	HBEGF (ENSODEG00000003356) #22	ENSODEG00000003400 #23	CYSTM1 (ENSODEG00000003409) #24	IGIP (ENSODEG00000018907) #25	PURA (ENSODEG00000003471)	ENSODEG00000003501 #26	PSD2 (ENSODEG00000002162) #27	CXXC5 (ENSODEG00000002416) #28	UBE2D2 (ENSODEG00000002451) #29	ENSODEG00000002461	STING1 (ENSODEG00000002487) #30	SMIM33 (ENSODEG00000002510) #31	ENSODEG00000002527 #32	DNAJC18 (ENSODEG00000002783) #33	SPATA24 (ENSODEG00000002820) #34	PROB1 (ENSODEG00000002833) #35
Long-tailed chinchilla	MODERN SPECIES	125	HARS1 (ENSCLAG00000012601) #8	DND1 (ENSCLAG00000012746) #9	WDR55 (ENSCLAG00000012803) #10	IK (ENSCLAG00000012944) #11	NDUFA2 (ENSCLAG00000011804) #12	TMCO6 (ENSCLAG00000011852) #13	CD14 (ENSCLAG00000011992) #14	ENSCLAG00000006382	SLC35A4 (ENSCLAG00000017727)	ENSCLAG00000003261 #16	APBB3 (ENSCLAG00000003294) #18	SRA1 (ENSCLAG00000003359) #19	EIF4EBP3 (ENSCLAG00000003391)	ANKHD1 (ENSCLAG00000003465) #20	SLC4A9 (ENSCLAG00000003623) #21	HBEGF (ENSCLAG00000003788) #22	ENSCLAG00000003821 #23	CYSTM1 (ENSCLAG00000003846) #24	PURA (ENSCLAG00000017602)	ENSCLAG00000003987 #26	PSD2 (ENSCLAG00000004067) #27	CXXC5 (ENSCLAG00000004149) #28	UBE2D2 (ENSCLAG00000004214) #29	STING1 (ENSCLAG00000004327) #30	SMIM33 (ENSCLAG00000004425) #31	ECSCR (ENSCLAG00000004465) #32	DNAJC18 (ENSCLAG00000004541) #33	SPATA24 (ENSCLAG00000006495) #34	MZB1 (ENSCLAG00000006539) #36	SLC23A1 (ENSCLAG00000006588) #37	PAIP2 (ENSCLAG00000006663)
Naked mole-rat female	DUPLICATION
Naked mole-rat female	MODERN SPECIES	6	ENSHGLG00000039662	ENSHGLG00000018096	PSMF1 (ENSHGLG00000045332)	ENSHGLG00000032490	C20orf202 (ENSHGLG00000013538)	RAD21L1 (ENSHGLG00000018570)	SNPH (ENSHGLG00000034370)	ENSHGLG00000050913	SDCBP2 (ENSHGLG00000011402)	FKBP1A (ENSHGLG00000041513)	NSFL1C (ENSHGLG00000013256)	SIRPB2 (ENSHGLG00000039542)	ENSHGLG00000039352	ENSHGLG00000017970	ENSHGLG00000036341	ENSHGLG00000041115 #22	ENSHGLG00000006371	ENSHGLG00000036503	ENSHGLG00000037296	ENSHGLG00000008095	ENSHGLG00000034900	STK35 (ENSHGLG00000049056)	TGM3 (ENSHGLG00000012294)	ENSHGLG00000044597	TGM6 (ENSHGLG00000012751)	ENSHGLG00000036511	TMC2 (ENSHGLG00000017324)	NOP56 (ENSHGLG00000015992)	IDH3B (ENSHGLG00000015582)	EBF4 (ENSHGLG00000015872)	ENSHGLG00000005535
Naked mole-rat female	MODERN SPECIES	25	ZMAT2 (ENSHGLG00000008187)	HARS2 (ENSHGLG00000006165) #7	HARS1 (ENSHGLG00000004453) #8	DND1 (ENSHGLG00000009358) #9	WDR55 (ENSHGLG00000008338) #10	IK (ENSHGLG00000004862) #11	CD14 (ENSHGLG00000040499) #14	SLC35A4 (ENSHGLG00000006436)	APBB3 (ENSHGLG00000011129) #18	SRA1 (ENSHGLG00000041135) #19	EIF4EBP3 (ENSHGLG00000036581)	ANKHD1 (ENSHGLG00000016064) #20	ENSHGLG00000021134	ENSHGLG00000034741	SLC4A9 (ENSHGLG00000014520) #21	ENSHGLG00000018639 #22	PFDN1 (ENSHGLG00000035690) #23	ENSHGLG00000009963	ENSHGLG00000048922	ENSHGLG00000040081	CYSTM1 (ENSHGLG00000012358) #24	PURA (ENSHGLG00000020698)	NRG2 (ENSHGLG00000009431) #26	PSD2 (ENSHGLG00000008076) #27	CXXC5 (ENSHGLG00000007092) #28	UBE2D2 (ENSHGLG00000004792) #29	STING1 (ENSHGLG00000032049) #30	ENSHGLG00000006931 #32	SMIM33 (ENSHGLG00000008582) #31	DNAJC18 (ENSHGLG00000005126) #33	PROB1 (ENSHGLG00000049405) #35
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Eulipotyphla	ANCESTRAL SPECIES	275															ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24
Hedgehog	MODERN SPECIES	1516																HBEGF (ENSEEUG00000009910) #22
Common shrew	MODERN SPECIES	1014															ENSSARG00000004016 #21	HBEGF (ENSSARG00000003983) #22	PFDN1 (ENSSARG00000003970) #23
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Carnivora	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Caniformia	ANCESTRAL SPECIES	5	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Canidae	ANCESTRAL SPECIES	29	ENSGT00390000005922.b.d.b.a.i #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.u #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844.c #16	ENSGT00390000007844.d.a.a #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.u.a.a #23	ENSGT00940000171414	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Red fox	MODERN SPECIES	4	HARS2 (ENSVVUG00000015439) #7	HARS (ENSVVUG00000013620) #8	DND1 (ENSVVUG00000013559) #9	ENSVVUG00000013006 #10	NDUFA2 (ENSVVUG00000012989) #12	TMCO6 (ENSVVUG00000012955) #13	CD14 (ENSVVUG00000012947) #14	SLC35A4 (ENSVVUG00000012944)	ENSVVUG00000012942 #16	APBB3 (ENSVVUG00000012406) #18	SRA1 (ENSVVUG00000012374) #19	EIF4EBP3 (ENSVVUG00000012362)	ANKHD1 (ENSVVUG00000010478) #20	ENSVVUG00000010398	SLC4A9 (ENSVVUG00000010143) #21	HBEGF (ENSVVUG00000010124) #22	CYSTM1 (ENSVVUG00000010100) #24	IGIP (ENSVVUG00000010096) #25	PURA (ENSVVUG00000010092)	NRG2 (ENSVVUG00000010056) #26	PSD2 (ENSVVUG00000010035) #27	CXXC5 (ENSVVUG00000010021) #28	UBE2D2 (ENSVVUG00000010020) #29	TMEM173 (ENSVVUG00000009964) #30	ECSCR (ENSVVUG00000009951) #32	DNAJC18 (ENSVVUG00000009942) #33	SPATA24 (ENSVVUG00000009909) #34	PROB1 (ENSVVUG00000009908) #35	ENSVVUG00000009904 #36	SLC23A1 (ENSVVUG00000009894) #37	PAIP2 (ENSVVUG00000009886)
Canis_lupus	ANCESTRAL SPECIES	6	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a.i.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.u #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844.c #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.u.a.a.a #23	ENSGT00940000171414	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Dog	MODERN SPECIES	11	HARS2 (ENSCAFG00845002374) #7	HARS1 (ENSCAFG00845002179) #8	DND1 (ENSCAFG00845002066) #9	WDR55 (ENSCAFG00845002039) #10	IK (ENSCAFG00845002021) #11	NDUFA2 (ENSCAFG00845001992) #12	TMCO6 (ENSCAFG00845001948) #13	CD14 (ENSCAFG00845001909) #14	SLC35A4 (ENSCAFG00845001883)	APBB3 (ENSCAFG00845001840) #18	APBB3 (ENSCAFG00845001716) #19	EIF4EBP3 (ENSCAFG00845001691)	ANKHD1 (ENSCAFG00845001622) #20	ENSCAFG00845001482	SLC4A9 (ENSCAFG00845001336) #21	HBEGF (ENSCAFG00845001249) #22	PFDN1 (ENSCAFG00845001230) #23	ENSCAFG00845001205	IGIP (ENSCAFG00845001175) #25	PURA (ENSCAFG00845001158)	NRG2 (ENSCAFG00845001070) #26	PSD2 (ENSCAFG00845001040) #27	CXXC5 (ENSCAFG00845001003) #28	UBE2D2 (ENSCAFG00845000981) #29	SMIM33 (ENSCAFG00845000957) #31	ECSCR (ENSCAFG00845000875) #30	DNAJC18 (ENSCAFG00845000811) #33	SPATA24 (ENSCAFG00845000773) #34	PROB1 (ENSCAFG00845000748) #35	SLC23A1 (ENSCAFG00845000734) #36	SLC23A1 (ENSCAFG00845000694) #37
Dingo	MODERN SPECIES	98	ENSCAFG00020000925 #8	DND1 (ENSCAFG00020001055) #9	WDR55 (ENSCAFG00020001074) #10	ENSCAFG00020001105 #11	ENSCAFG00020001260	ENSCAFG00020001429 #12	TMCO6 (ENSCAFG00020001449) #13	CD14 (ENSCAFG00020001518) #14	SLC35A4 (ENSCAFG00020001522)	ENSCAFG00020001529 #16	APBB3 (ENSCAFG00020001619) #18	SRA1 (ENSCAFG00020001924) #19	EIF4EBP3 (ENSCAFG00020001947)	ANKHD1 (ENSCAFG00020002077) #20	SLC4A9 (ENSCAFG00020002964) #21	HBEGF (ENSCAFG00020003003) #22	CYSTM1 (ENSCAFG00020003029) #24	IGIP (ENSCAFG00020003031) #25	PURA (ENSCAFG00020003033)	NRG2 (ENSCAFG00020003042) #26	PSD2 (ENSCAFG00020003080) #27	CXXC5 (ENSCAFG00020003099) #28	STING1 (ENSCAFG00020003115) #30	ECSCR (ENSCAFG00020003155) #32	DNAJC18 (ENSCAFG00020003158) #33	SPATA24 (ENSCAFG00020003169) #34	PROB1 (ENSCAFG00020003180) #35	ENSCAFG00020003182 #36	SLC23A1 (ENSCAFG00020003186) #37	PAIP2 (ENSCAFG00020003214)	ZMYND11 (ENSCAFG00020003251)
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Ursidae	ANCESTRAL SPECIES	16	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Ursus	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Polar bear	MODERN SPECIES	173	ZMAT2 (ENSUMAG00000012852)	HARS2 (ENSUMAG00000012858) #7	HARS1 (ENSUMAG00000012884) #8	WDR55 (ENSUMAG00000013223) #10	IK (ENSUMAG00000013228) #11	NDUFA2 (ENSUMAG00000013234) #12	TMCO6 (ENSUMAG00000013237) #13	CD14 (ENSUMAG00000013241) #14	SLC35A4 (ENSUMAG00000013259)	ENSUMAG00000013262 #16	APBB3 (ENSUMAG00000013269) #18	SRA1 (ENSUMAG00000013276) #19	EIF4EBP3 (ENSUMAG00000013279)	ANKHD1 (ENSUMAG00000013419) #20	SLC4A9 (ENSUMAG00000015246) #21	HBEGF (ENSUMAG00000015364) #22	PFDN1 (ENSUMAG00000015373) #23	CYSTM1 (ENSUMAG00000015383) #24	IGIP (ENSUMAG00000015388) #25	ENSUMAG00000015394 #26	PSD2 (ENSUMAG00000015430) #27	UBE2D2 (ENSUMAG00000015684) #29	STING1 (ENSUMAG00000015691) #30	ECSCR (ENSUMAG00000015741) #32	DNAJC18 (ENSUMAG00000015751) #33	SPATA24 (ENSUMAG00000015757) #34	ENSUMAG00000015762 #36	SLC23A1 (ENSUMAG00000015769) #37	ENSUMAG00000015798	MATR3 (ENSUMAG00000015808)	SIL1 (ENSUMAG00000015843)
American black bear	MODERN SPECIES	5448															SLC4A9 (ENSUAMG00000023831) #21	HBEGF (ENSUAMG00000023826) #22
Giant Panda	MODERN SPECIES	13	HARS2 (ENSAMEG00000010779) #7	HARS1 (ENSAMEG00000010837) #8	DND1 (ENSAMEG00000010881) #9	WDR55 (ENSAMEG00000029034) #10	IK (ENSAMEG00000010888) #11	NDUFA2 (ENSAMEG00000010954) #12	TMCO6 (ENSAMEG00000010956) #13	CD14 (ENSAMEG00000030576) #14	SLC35A4 (ENSAMEG00000020139)	ENSAMEG00000010975 #16	APBB3 (ENSAMEG00000010977) #18	SRA1 (ENSAMEG00000011005) #19	EIF4EBP3 (ENSAMEG00000029144)	ANKHD1 (ENSAMEG00000011018) #20	SLC4A9 (ENSAMEG00000011090) #21	HBEGF (ENSAMEG00000029706) #22	PFDN1 (ENSAMEG00000011189) #23	CYSTM1 (ENSAMEG00000011191) #24	IGIP (ENSAMEG00000020140) #25	PURA (ENSAMEG00000011192)	NRG2 (ENSAMEG00000010938) #26	PSD2 (ENSAMEG00000011200) #27	CXXC5 (ENSAMEG00000028097) #28	UBE2D2 (ENSAMEG00000011216) #29	STING1 (ENSAMEG00000011225) #30	SMIM33 (ENSAMEG00000020141) #31	ECSCR (ENSAMEG00000026373) #32	DNAJC18 (ENSAMEG00000011255) #33	ENSAMEG00000023633	SPATA24 (ENSAMEG00000011280) #34	PROB1 (ENSAMEG00000011223) #35
Mustelinae	ANCESTRAL SPECIES	17	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
American mink	MODERN SPECIES	21	HARS2 (ENSNVIG00000012976) #7	ENSNVIG00000013180 #8	DND1 (ENSNVIG00000013444) #9	WDR55 (ENSNVIG00000013456) #10	IK (ENSNVIG00000013473) #11	NDUFA2 (ENSNVIG00000013487) #12	TMCO6 (ENSNVIG00000013502) #13	CD14 (ENSNVIG00000013525) #14	SLC35A4 (ENSNVIG00000013539)	ENSNVIG00000013548 #16	APBB3 (ENSNVIG00000013558) #18	EIF4EBP3 (ENSNVIG00000013703)	ANKHD1 (ENSNVIG00000013724) #20	ENSNVIG00000013878	SLC4A9 (ENSNVIG00000013887) #21	HBEGF (ENSNVIG00000014005) #22	PFDN1 (ENSNVIG00000014058) #23	CYSTM1 (ENSNVIG00000014072) #24	IGIP (ENSNVIG00000014092) #25	NRG2 (ENSNVIG00000014099) #26	PSD2 (ENSNVIG00000014125) #27	CXXC5 (ENSNVIG00000014156) #28	UBE2D2 (ENSNVIG00000014164) #29	STING1 (ENSNVIG00000014206) #30	SMIM33 (ENSNVIG00000014229) #31	ECSCR (ENSNVIG00000014231) #32	DJC18 (ENSNVIG00000014272) #33	SPATA24 (ENSNVIG00000014301) #34	PROB1 (ENSNVIG00000014327) #35	PERP1 (ENSNVIG00000014330) #36	S23A1 (ENSNVIG00000014345) #37
Ferret	MODERN SPECIES	175	PCDHAC2 (ENSMPUG00000008358)	PCDHA3 (ENSMPUG00000008368)	ZMAT2 (ENSMPUG00000008383)	HARS2 (ENSMPUG00000008422) #7	HARS1 (ENSMPUG00000008434) #8	WDR55 (ENSMPUG00000008443) #10	TMCO6 (ENSMPUG00000008448) #13	CD14 (ENSMPUG00000008459) #14	ENSMPUG00000008463	SLC35A4 (ENSMPUG00000019783)	APBB3 (ENSMPUG00000008482) #18	SRA1 (ENSMPUG00000008493) #19	ANKHD1 (ENSMPUG00000008542) #20	ENSMPUG00000008565	SLC4A9 (ENSMPUG00000008604) #21	HBEGF (ENSMPUG00000008972) #22	ENSMPUG00000008982 #23	ENSMPUG00000008993	PURA (ENSMPUG00000008996)	NRG2 (ENSMPUG00000009008) #26	PSD2 (ENSMPUG00000009070) #27	ENSMPUG00000009089	CXXC5 (ENSMPUG00000009101) #28	UBE2D2 (ENSMPUG00000009110) #29	STING1 (ENSMPUG00000009119) #30	ECSCR (ENSMPUG00000009165) #32	DNAJC18 (ENSMPUG00000009177) #33	SPATA24 (ENSMPUG00000009186) #34	PROB1 (ENSMPUG00000019785) #35	MZB1 (ENSMPUG00000009239) #36	SLC23A1 (ENSMPUG00000009270) #37
Felidae	ANCESTRAL SPECIES	6	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.q #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Panthera	ANCESTRAL SPECIES	6	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.q #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225.e #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.q #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
lion	MODERN SPECIES		HARS2 (ENSPLOG00000001136) #7	HARS1 (ENSPLOG00000001403) #8	ENSPLOG00000001584 #9	WDR55 (ENSPLOG00000001601) #10	IK (ENSPLOG00000001628) #11	NDUFA2 (ENSPLOG00000001666) #12	TMCO6 (ENSPLOG00000001690) #13	CD14 (ENSPLOG00000001718) #14	SLC35A4 (ENSPLOG00000001750)	ENSPLOG00000001757 #16	APBB3 (ENSPLOG00000001795) #18	SRA1 (ENSPLOG00000001894) #19	EIF4EBP3 (ENSPLOG00000001907)	ANKHD1 (ENSPLOG00000001996) #20	SLC4A9 (ENSPLOG00000002193) #21	HBEGF (ENSPLOG00000002301) #22	PFDN1 (ENSPLOG00000002312) #23	CYSTM1 (ENSPLOG00000002334) #24	IGIP (ENSPLOG00000002346) #25	PURA (ENSPLOG00000002353)	NRG2 (ENSPLOG00000002472) #26	PSD2 (ENSPLOG00000002677) #27	CXXC5 (ENSPLOG00000002697) #28	UBE2D2 (ENSPLOG00000002718) #29	STING1 (ENSPLOG00000002770) #30	SMIM33 (ENSPLOG00000002814) #31	ECSCR (ENSPLOG00000002822) #32	DNAJC18 (ENSPLOG00000002854) #33	SPATA24 (ENSPLOG00000002874) #34	PROB1 (ENSPLOG00000002894) #35	MZB1 (ENSPLOG00000002905) #36
leopard	MODERN SPECIES	98	ENSPPRG00000009501 #9	WDR55 (ENSPPRG00000009842) #10	IK (ENSPPRG00000010062) #11	NDUFA2 (ENSPPRG00000010914) #12	TMCO6 (ENSPPRG00000012430) #13	CD14 (ENSPPRG00000012838) #14	SLC35A4 (ENSPPRG00000017469)	ENSPPRG00000013902 #16	APBB3 (ENSPPRG00000024348) #18	SRA1 (ENSPPRG00000023984) #19	EIF4EBP3 (ENSPPRG00000023846)	ENSPPRG00000023568 #20	ENSPPRG00000023407	ENSPPRG00000000371 #20	SLC4A9 (ENSPPRG00000006476) #21	HBEGF (ENSPPRG00000007072) #22	ENSPPRG00000007668 #23	CYSTM1 (ENSPPRG00000007834) #24	IGIP (ENSPPRG00000017849) #25	PURA (ENSPPRG00000017864)	NRG2 (ENSPPRG00000013625) #26	PSD2 (ENSPPRG00000015385) #27	CXXC5 (ENSPPRG00000016418) #28	UBE2D2 (ENSPPRG00000018459) #29	STING1 (ENSPPRG00000019639) #30	SMIM33 (ENSPPRG00000019947) #31	ECSCR (ENSPPRG00000021233) #32	DNAJC18 (ENSPPRG00000022179) #33	SPATA24 (ENSPPRG00000000986) #34	PROB1 (ENSPPRG00000018174) #35	MZB1 (ENSPPRG00000001444) #36
Tiger	MODERN SPECIES	107	HARS1 (ENSPTIG00000020494) #8	ENSPTIG00000020069	WDR55 (ENSPTIG00000019838) #10	IK (ENSPTIG00000018863) #11	NDUFA2 (ENSPTIG00000018315) #12	TMCO6 (ENSPTIG00000017178) #13	CD14 (ENSPTIG00000017126) #14	SLC35A4 (ENSPTIG00000004896)	ENSPTIG00000015182 #16	APBB3 (ENSPTIG00000012028) #18	SRA1 (ENSPTIG00000011361) #19	EIF4EBP3 (ENSPTIG00000010875)	ENSPTIG00000009082 #20	ENSPTIG00000007099 #20	SLC4A9 (ENSPTIG00000020507) #21	HBEGF (ENSPTIG00000019582) #22	PFDN1 (ENSPTIG00000019094) #23	CYSTM1 (ENSPTIG00000018858) #24	IGIP (ENSPTIG00000004400) #25	ENSPTIG00000015071 #26	PSD2 (ENSPTIG00000014730) #27	CXXC5 (ENSPTIG00000013861) #28	UBE2D2 (ENSPTIG00000013683) #29	STING1 (ENSPTIG00000013362) #30	SMIM33 (ENSPTIG00000012648) #31	ECSCR (ENSPTIG00000011106) #32	DNAJC18 (ENSPTIG00000009915) #33	SPATA24 (ENSPTIG00000007458) #34	MZB1 (ENSPTIG00000006795) #36	SLC23A1 (ENSPTIG00000020973) #37	PAIP2 (ENSPTIG00000020215)
Cat	MODERN SPECIES		PCDHAC2 (ENSFCAG00000003685)	ZMAT2 (ENSFCAG00000001289)	HARS2 (ENSFCAG00000001288) #7	HARS1 (ENSFCAG00000001286) #8	WDR55 (ENSFCAG00000031277) #10	IK (ENSFCAG00000001279) #11	NDUFA2 (ENSFCAG00000001282) #12	TMCO6 (ENSFCAG00000001280) #13	CD14 (ENSFCAG00000001278) #14	SLC35A4 (ENSFCAG00000001277)	ENSFCAG00000039181 #16	APBB3 (ENSFCAG00000001276) #18	SRA1 (ENSFCAG00000035180) #19	ANKHD1 (ENSFCAG00000001275) #20	SLC4A9 (ENSFCAG00000001274) #21	HBEGF (ENSFCAG00000001273) #22	PFDN1 (ENSFCAG00000001272) #23	CYSTM1 (ENSFCAG00000001271) #24	IGIP (ENSFCAG00000031452) #25	NRG2 (ENSFCAG00000021921) #26	PSD2 (ENSFCAG00000036369) #27	CXXC5 (ENSFCAG00000010527) #28	UBE2D2 (ENSFCAG00000022060) #29	STING1 (ENSFCAG00000001729) #30	SMIM33 (ENSFCAG00000028569) #31	ENSFCAG00000031532 #32	DNAJC18 (ENSFCAG00000001727) #33	SPATA24 (ENSFCAG00000001726) #34	PROB1 (ENSFCAG00000044483) #35	MZB1 (ENSFCAG00000022407) #36	SLC23A1 (ENSFCAG00000001723) #37
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Equus	ANCESTRAL SPECIES	6	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Horse	MODERN SPECIES	5	WDR55 (ENSECAG00000043759) #10	ENSECAG00000012779 #11	NDUFA2 (ENSECAG00000023131) #12	ENSECAG00000031163 #13	CD14 (ENSECAG00000001784) #14	ENSECAG00000038120 #11	ENSECAG00000033774 #12	ENSECAG00000039506 #13	CD14 (ENSECAG00000056386) #14	ENSECAG00000024241	SLC35A4 (ENSECAG00000004900)	APBB3 (ENSECAG00000003436) #18	SRA1 (ENSECAG00000048166) #19	ANKHD1 (ENSECAG00000015036) #20	SLC4A9 (ENSECAG00000008363) #21	HBEGF (ENSECAG00000010656) #22	ENSECAG00000033043 #23	PURA (ENSECAG00000035184)	NRG2 (ENSECAG00000013341) #26	PSD2 (ENSECAG00000013590) #27	CXXC5 (ENSECAG00000016958) #28	UBE2D2 (ENSECAG00000026911) #29	STING1 (ENSECAG00000017396) #30	ENSECAG00000017697 #32	SMIM33 (ENSECAG00000005172) #31	DNAJC18 (ENSECAG00000018646) #33	SPATA24 (ENSECAG00000020376) #34	PROB1 (ENSECAG00000005235) #35	MZB1 (ENSECAG00000020503) #36	SLC23A1 (ENSECAG00000021087) #37	PAIP2 (ENSECAG00000012036)
Donkey	MODERN SPECIES	3	ZMAT2 (ENSEASG00005025162)	HARS2 (ENSEASG00005017563) #7	HARS1 (ENSEASG00005017536) #8	WDR55 (ENSEASG00005017529) #10	IK (ENSEASG00005017521) #11	NDUFA2 (ENSEASG00005017518) #12	TMCO6 (ENSEASG00005017504) #13	ENSEASG00005026915 #14	ENSEASG00005017493	APBB3 (ENSEASG00005017487) #18	SLC35A4 (ENSEASG00005032362)	SRA1 (ENSEASG00005034530) #19	EIF4EBP3 (ENSEASG00005029306)	ANKHD1 (ENSEASG00005016592) #20	SLC4A9 (ENSEASG00005016424) #21	HBEGF (ENSEASG00005016411) #22	PFDN1 (ENSEASG00005038284) #23	CYSTM1 (ENSEASG00005037941) #24	PURA (ENSEASG00005024820)	NRG2 (ENSEASG00005020907) #26	PSD2 (ENSEASG00005020894) #27	CXXC5 (ENSEASG00005020891) #28	UBE2D2 (ENSEASG00005026096) #29	STING1 (ENSEASG00005020887) #30	SMIM33 (ENSEASG00005032721) #31	ECSCR (ENSEASG00005020885) #32	DNAJC18 (ENSEASG00005020882) #33	PROB1 (ENSEASG00005030098) #35	SLC23A1 (ENSEASG00005020869) #37	PAIP2 (ENSEASG00005024829)	MATR3 (ENSEASG00005020857)
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Megabat	MODERN SPECIES	1164			ZMAT2 (ENSPVAG00000009717)	HARS2 (ENSPVAG00000009714) #7	HARS1 (ENSPVAG00000009711) #8	DND1 (ENSPVAG00000009710) #9	WDR55 (ENSPVAG00000009709) #10	NDUFA2 (ENSPVAG00000009708) #12	TMCO6 (ENSPVAG00000009705) #13	IK (ENSPVAG00000009703) #11	CD14 (ENSPVAG00000009702) #14	APBB3 (ENSPVAG00000009699) #18	SRA1 (ENSPVAG00000009698) #19	ANKHD1 (ENSPVAG00000009697) #20	SLC4A9 (ENSPVAG00000009695) #21	HBEGF (ENSPVAG00000009694) #22	PFDN1 (ENSPVAG00000009692) #23	CYSTM1 (ENSPVAG00000009691) #24	IGIP (ENSPVAG00000009690) #25	PURA (ENSPVAG00000009689)	NRG2 (ENSPVAG00000009686) #26	PSD2 (ENSPVAG00000009684) #27
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Greater horseshoe bat	MODERN SPECIES	16	HARS2 (ENSRFEG00010014579) #7	HARS1 (ENSRFEG00010013452) #8	DND1 (ENSRFEG00010013376) #9	WDR55 (ENSRFEG00010013236) #10	IK (ENSRFEG00010012945) #11	NDUFA2 (ENSRFEG00010012820) #12	TMCO6 (ENSRFEG00010012767) #13	CD14 (ENSRFEG00010012734) #14	ENSRFEG00010012587	SLC35A4 (ENSRFEG00010012565)	ENSRFEG00010012516 #16	APBB3 (ENSRFEG00010012315) #18	EIF4EBP3 (ENSRFEG00010012240)	ANKHD1 (ENSRFEG00010012041) #20	SLC4A9 (ENSRFEG00010010874) #21	HBEGF (ENSRFEG00010010763) #22	PFDN1 (ENSRFEG00010010709) #23	CYSTM1 (ENSRFEG00010010658) #24	IGIP (ENSRFEG00010010627) #25	PURA (ENSRFEG00010010594)	NRG2 (ENSRFEG00010010326) #26	PSD2 (ENSRFEG00010010136) #27	CXXC5 (ENSRFEG00010010092) #28	ENSRFEG00010009991 #29	STING1 (ENSRFEG00010009960) #30	SMIM33 (ENSRFEG00010009941) #31	ECSCR (ENSRFEG00010009895) #32	DNAJC18 (ENSRFEG00010009855) #33	SPATA24 (ENSRFEG00010009795) #34	PROB1 (ENSRFEG00010009785) #35	MZB1 (ENSRFEG00010009750) #36
Microbat	MODERN SPECIES	965	PCDHA10 (ENSMLUG00000016845)	PCDHA2 (ENSMLUG00000013985)	PCDHA1 (ENSMLUG00000013983)	ZMAT2 (ENSMLUG00000017525)	HARS2 (ENSMLUG00000017524) #7	ENSMLUG00000003199 #8	DND1 (ENSMLUG00000003195) #9	ENSMLUG00000003177 #10	TMCO6 (ENSMLUG00000003184) #13	CD14 (ENSMLUG00000003174) #14	SLC35A4 (ENSMLUG00000003168)	APBB3 (ENSMLUG00000003148) #18	SRA1 (ENSMLUG00000022959) #19	ANKHD1 (ENSMLUG00000003126) #20	SLC4A9 (ENSMLUG00000003111) #21	HBEGF (ENSMLUG00000003107) #22	ENSMLUG00000003106 #23	CYSTM1 (ENSMLUG00000003105) #24	PURA (ENSMLUG00000003093)	ENSMLUG00000023421	ENSMLUG00000003075 #26	CXXC5 (ENSMLUG00000003056) #28	STING1 (ENSMLUG00000003046) #30	SMIM33 (ENSMLUG00000003043) #31	ECSCR (ENSMLUG00000029814) #32	DNAJC18 (ENSMLUG00000003038) #33	ENSMLUG00000001709	ENSMLUG00000003034	MZB1 (ENSMLUG00000003018) #36	SLC23A1 (ENSMLUG00000003008) #37	PAIP2 (ENSMLUG00000003002)
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Suina	ANCESTRAL SPECIES	11	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Chacoan peccary	MODERN SPECIES	913	HARS2 (ENSCWAG00000010142) #7	HARS1 (ENSCWAG00000009837) #8	DND1 (ENSCWAG00000009782) #9	WDR55 (ENSCWAG00000009743) #10	IK (ENSCWAG00000009630) #11	NDUFA2 (ENSCWAG00000009579) #12	TMCO6 (ENSCWAG00000009518) #13	CD14 (ENSCWAG00000009491) #14	SLC35A4 (ENSCWAG00000009469)	ENSCWAG00000009424 #16	APBB3 (ENSCWAG00000009272) #18	SRA1 (ENSCWAG00000009227) #19	EIF4EBP3 (ENSCWAG00000009189)	ANKHD1 (ENSCWAG00000009009) #20	SLC4A9 (ENSCWAG00000008616) #21	HBEGF (ENSCWAG00000008556) #22	ENSCWAG00000008517	CYSTM1 (ENSCWAG00000008484) #24	IGIP (ENSCWAG00000008463) #25	PURA (ENSCWAG00000008446)	ENSCWAG00000008428	NRG2 (ENSCWAG00000006895) #26	PSD2 (ENSCWAG00000006747) #27	CXXC5 (ENSCWAG00000006726) #28
Pig	MODERN SPECIES	10	HARS1 (ENSSSCG00000014375) #8	DND1 (ENSSSCG00000014374) #9	WDR55 (ENSSSCG00000032062) #10	IK (ENSSSCG00000014372) #11	NDUFA2 (ENSSSCG00000014371) #12	TMCO6 (ENSSSCG00000014370) #13	CD14 (ENSSSCG00000014369) #14	ENSSSCG00000014368	SLC35A4 (ENSSSCG00000014367)	ENSSSCG00000044155 #16	APBB3 (ENSSSCG00000014366) #18	SRA1 (ENSSSCG00000055768) #19	EIF4EBP3 (ENSSSCG00000059551)	ANKHD1 (ENSSSCG00000014364) #20	SLC4A9 (ENSSSCG00000014363) #21	HBEGF (ENSSSCG00000014362) #22	PFDN1 (ENSSSCG00000038493) #23	CYSTM1 (ENSSSCG00000014361) #24	PURA (ENSSSCG00000050498)	NRG2 (ENSSSCG00000021082) #26	PSD2 (ENSSSCG00000029541) #27	CXXC5 (ENSSSCG00000037898) #28	UBE2D2 (ENSSSCG00000036711) #29	STING1 (ENSSSCG00000014349) #30	SMIM33 (ENSSSCG00000042105) #31	ECSCR (ENSSSCG00000014351) #32	DNAJC18 (ENSSSCG00000014356) #33	SPATA24 (ENSSSCG00000014348) #34	PROB1 (ENSSSCG00000014347) #35	MZB1 (ENSSSCG00000029239) #36	SLC23A1 (ENSSSCG00000026423) #37
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Camelidae	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Alpaca	MODERN SPECIES	3616	PCDHB15 (ENSVPAG00000002474)	PCDHB14 (ENSVPAG00000002472)	PCDHAC2 (ENSVPAG00000002470)	ENSVPAG00000002469	ENSVPAG00000002467	ENSVPAG00000002466	ZMAT2 (ENSVPAG00000002463)	WDR55 (ENSVPAG00000002461) #10	NDUFA2 (ENSVPAG00000002460) #12	ENSVPAG00000002459 #13	IK (ENSVPAG00000002458) #11	CD14 (ENSVPAG00000002457) #14	SRA1 (ENSVPAG00000002455) #19	ANKHD1 (ENSVPAG00000002452) #20	ENSVPAG00000002448 #21	HBEGF (ENSVPAG00000002446) #22	PFDN1 (ENSVPAG00000002445) #23
Arabian camel	MODERN SPECIES	22	HARS2 (ENSCDRG00005013829) #7	HARS1 (ENSCDRG00005016848) #8	DND1 (ENSCDRG00005018824) #9	WDR55 (ENSCDRG00005018882) #10	IK (ENSCDRG00005018927) #11	NDUFA2 (ENSCDRG00005019021) #12	TMCO6 (ENSCDRG00005019066) #13	CD14 (ENSCDRG00005019128) #14	SLC35A4 (ENSCDRG00005019143)	ENSCDRG00005019151 #16	APBB3 (ENSCDRG00005019186) #18	SRA1 (ENSCDRG00005019623) #19	EIF4EBP3 (ENSCDRG00005019628)	ANKHD1 (ENSCDRG00005019648) #20	SLC4A9 (ENSCDRG00005019967) #21	HBEGF (ENSCDRG00005020281) #22	PFDN1 (ENSCDRG00005020289) #23	ENSCDRG00005020291 #24	IGIP (ENSCDRG00005000094) #25	PURA (ENSCDRG00005000128)	ENSCDRG00005000157 #26	PSD2 (ENSCDRG00005000191) #27	CXXC5 (ENSCDRG00005000252) #28	UBE2D2 (ENSCDRG00005000276) #29	ENSCDRG00005000311	STING1 (ENSCDRG00005000344) #30	SMIM33 (ENSCDRG00005000403) #31	ECSCR (ENSCDRG00005000437) #32	DNAJC18 (ENSCDRG00005000495) #33	SPATA24 (ENSCDRG00005000530) #34	PROB1 (ENSCDRG00005000561) #35
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00960000191809	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Pecora	ANCESTRAL SPECIES		ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00960000191809	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Yarkand deer	MODERN SPECIES	32	DND1 (ENSCHYG00000022050) #9	WDR55 (ENSCHYG00000021976) #10	ENSCHYG00000021836 #11	ENSCHYG00000021747 #12	TMCO6 (ENSCHYG00000021515) #13	ENSCHYG00000021478	CD14 (ENSCHYG00000021456) #14	ENSCHYG00000021346	SLC35A4 (ENSCHYG00000021327)	ENSCHYG00000021290 #16	APBB3 (ENSCHYG00000020143) #18	SRA1 (ENSCHYG00000020039) #19	EIF4EBP3 (ENSCHYG00000020000)	ANKHD1 (ENSCHYG00000018958) #20	SLC4A9 (ENSCHYG00000018455) #21	HBEGF (ENSCHYG00000018370) #22	ENSCHYG00000018303 #23	CYSTM1 (ENSCHYG00000018270) #24	IGIP (ENSCHYG00000018245) #25	PURA (ENSCHYG00000018218)	ENSCHYG00000018199	NRG2 (ENSCHYG00000017655) #26	PSD2 (ENSCHYG00000017479) #27	CXXC5 (ENSCHYG00000017428) #28	UBE2D2 (ENSCHYG00000017232) #29	STING1 (ENSCHYG00000017062) #30	SMIM33 (ENSCHYG00000017025) #31	ECSCR (ENSCHYG00000016703) #32	DNAJC18 (ENSCHYG00000016608) #33	ENSCHYG00000016454	PROB1 (ENSCHYG00000016432) #35
Percora_a	ANCESTRAL SPECIES		ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Bovidae	ANCESTRAL SPECIES		ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Caprinae	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Rambouillet Sheep	MODERN SPECIES	21	HARS2 (ENSOARG00020009907) #7	HARS (ENSOARG00020022713) #8	DND1 (ENSOARG00020022668) #9	WDR55 (ENSOARG00020022644) #10	IK (ENSOARG00020022605) #11	NDUFA2 (ENSOARG00020022560) #12	TMCO6 (ENSOARG00020022518) #13	CD14 (ENSOARG00020022493) #14	SLC35A4 (ENSOARG00020022487)	ENSOARG00020022454 #16	APBB3 (ENSOARG00020022354) #18	SRA1 (ENSOARG00020022305) #19	EIF4EBP3 (ENSOARG00020022277)	ANKHD1 (ENSOARG00020021597) #20	SLC4A9 (ENSOARG00020020984) #21	HBEGF (ENSOARG00020020934) #22	PFDN1 (ENSOARG00020020899) #23	CYSTM1 (ENSOARG00020020830) #24	IGIP (ENSOARG00020020812) #25	PURA (ENSOARG00020020779)	NRG2 (ENSOARG00020018861) #26	PSD2 (ENSOARG00020018628) #27	CXXC5 (ENSOARG00020018590) #28	UBE2D2 (ENSOARG00020018462) #29	STING1 (ENSOARG00020018383) #30	SMIM33 (ENSOARG00020018356) #31	ENSOARG00020018307 #32	DNAJC18 (ENSOARG00020018261) #33	SPATA24 (ENSOARG00020018188) #34	MZB1 (ENSOARG00020018100) #36	SLC23A1 (ENSOARG00020018006) #37
Goat	MODERN SPECIES	26	HARS2 (ENSCHIG00000009904) #7	HARS1 (ENSCHIG00000018288) #8	DND1 (ENSCHIG00000026376) #9	WDR55 (ENSCHIG00000018807) #10	IK (ENSCHIG00000008932) #11	NDUFA2 (ENSCHIG00000027231) #12	TMCO6 (ENSCHIG00000012882) #13	CD14 (ENSCHIG00000011350) #14	SLC35A4 (ENSCHIG00000012468)	ENSCHIG00000025738 #16	APBB3 (ENSCHIG00000019518) #18	SRA1 (ENSCHIG00000013652) #19	EIF4EBP3 (ENSCHIG00000026608)	ANKHD1 (ENSCHIG00000016020) #20	SLC4A9 (ENSCHIG00000015915) #21	HBEGF (ENSCHIG00000022689) #22	PFDN1 (ENSCHIG00000011157) #23	IGIP (ENSCHIG00000007518) #25	PURA (ENSCHIG00000009332)	ENSCHIG00000010412	NRG2 (ENSCHIG00000011115) #26	PSD2 (ENSCHIG00000014852) #27	CXXC5 (ENSCHIG00000017875) #28	UBE2D2 (ENSCHIG00000024215) #29	STING1 (ENSCHIG00000010381) #30	ENSCHIG00000005666 #32	DNAJC18 (ENSCHIG00000022675) #33	SPATA24 (ENSCHIG00000016759) #34	PROB1 (ENSCHIG00000010812) #35	MZB1 (ENSCHIG00000023416) #36	SLC23A1 (ENSCHIG00000011571) #37
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.s.a #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00960000191809	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT01000000222096	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Bos	ANCESTRAL SPECIES	3	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.s.a #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00960000191809	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT01000000222096	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Bos_a	ANCESTRAL SPECIES	2	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.s.a #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00960000191809	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT01000000222096	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00940000164708	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Wild yak	MODERN SPECIES	1158	ZMAT2 (ENSBMUG00000016262)	HARS2 (ENSBMUG00000016134) #7	HARS1 (ENSBMUG00000015699) #8	WDR55 (ENSBMUG00000015570) #10	IK (ENSBMUG00000015543) #11	ENSBMUG00000015491 #12	TMCO6 (ENSBMUG00000015453) #13	CD14 (ENSBMUG00000015420) #14	SLC35A4 (ENSBMUG00000015411)	ENSBMUG00000015392 #16	APBB3 (ENSBMUG00000015272) #18	EIF4EBP3 (ENSBMUG00000015216)	SRA1 (ENSBMUG00000015205) #19	ANKHD1 (ENSBMUG00000015158) #20	SLC4A9 (ENSBMUG00000015014) #21	HBEGF (ENSBMUG00000014920) #22	PFDN1 (ENSBMUG00000014909) #23	CYSTM1 (ENSBMUG00000014898) #24	ENSBMUG00000014878	NRG2 (ENSBMUG00000014762) #26	PSD2 (ENSBMUG00000014608) #27	CXXC5 (ENSBMUG00000014579) #28	ENSBMUG00000014554	UBE2D2 (ENSBMUG00000014539) #29	STING1 (ENSBMUG00000014526) #30	SMIM33 (ENSBMUG00000014509) #31	ECSCR (ENSBMUG00000014501) #32	DNAJC18 (ENSBMUG00000014491) #33	ENSBMUG00000014481	ENSBMUG00000014462 #36	SLC23A1 (ENSBMUG00000014450) #37
Domestic yak	MODERN SPECIES	27	HARS2 (ENSBGRG00000020191) #7	HARS1 (ENSBGRG00000018843) #8	DND1 (ENSBGRG00000018749) #9	WDR55 (ENSBGRG00000018638) #10	IK (ENSBGRG00000018393) #11	ENSBGRG00000018292 #12	TMCO6 (ENSBGRG00000018091) #13	CD14 (ENSBGRG00000018040) #14	SLC35A4 (ENSBGRG00000018014)	ENSBGRG00000017965 #16	APBB3 (ENSBGRG00000016849) #18	SRA1 (ENSBGRG00000016751) #19	EIF4EBP3 (ENSBGRG00000016704)	ANKHD1 (ENSBGRG00000015693) #20	SLC4A9 (ENSBGRG00000014553) #21	HBEGF (ENSBGRG00000014467) #22	PFDN1 (ENSBGRG00000014350) #23	CYSTM1 (ENSBGRG00000014293) #24	IGIP (ENSBGRG00000014277) #25	PURA (ENSBGRG00000014193)	NRG2 (ENSBGRG00000012651) #26	PSD2 (ENSBGRG00000012544) #27	CXXC5 (ENSBGRG00000012471) #28	ENSBGRG00000012335 #29	SMIM33 (ENSBGRG00000012237) #31	ECSCR (ENSBGRG00000012126) #32	DNAJC18 (ENSBGRG00000011988) #33	SPATA24 (ENSBGRG00000011739) #34	PROB1 (ENSBGRG00000011659) #35	MZB1 (ENSBGRG00000011587) #36	SLC23A1 (ENSBGRG00000011488) #37
Bos_b	ANCESTRAL SPECIES	2	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.s.a #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36
Cow	MODERN SPECIES	26	HARS2 (ENSBTAG00000025212) #7	HARS1 (ENSBTAG00000018847) #8	DND1 (ENSBTAG00000018845) #9	WDR55 (ENSBTAG00000015042) #10	IK (ENSBTAG00000015034) #11	NDUFA2 (ENSBTAG00000015041) #12	TMCO6 (ENSBTAG00000030589) #13	CD14 (ENSBTAG00000015032) #14	SLC35A4 (ENSBTAG00000030584) #16	APBB3 (ENSBTAG00000001450) #18	SRA1 (ENSBTAG00000001449) #19	EIF4EBP3 (ENSBTAG00000052310)	ENSBTAG00000010871 #20	ENSBTAG00000054857 #20	SLC4A9 (ENSBTAG00000021775) #21	HBEGF (ENSBTAG00000021766) #22	PFDN1 (ENSBTAG00000051779) #23	CYSTM1 (ENSBTAG00000016595) #24	IGIP (ENSBTAG00000025226) #25	PURA (ENSBTAG00000008881)	NRG2 (ENSBTAG00000010689) #26	PSD2 (ENSBTAG00000000238) #27	CXXC5 (ENSBTAG00000003986) #28	UBE2D2 (ENSBTAG00000004161) #29	STING1 (ENSBTAG00000002296) #30	SMIM33 (ENSBTAG00000030517) #31	ECSCR (ENSBTAG00000030518) #32	DNAJC18 (ENSBTAG00000002286) #33	SPATA24 (ENSBTAG00000017957) #34	PROB1 (ENSBTAG00000030520) #35	MZB1 (ENSBTAG00000038337) #36
Hybrid Bos Indicus	MODERN SPECIES	26	HARS2 (ENSBIXG00005002218) #7	HARS1 (ENSBIXG00005014863) #8	DND1 (ENSBIXG00005006374) #9	WDR55 (ENSBIXG00005006373) #10	IK (ENSBIXG00005014746) #11	ENSBIXG00005014710 #12	TMCO6 (ENSBIXG00005014688) #13	CD14 (ENSBIXG00005014665) #14	SLC35A4 (ENSBIXG00005014618)	ENSBIXG00005014645 #16	APBB3 (ENSBIXG00005014588) #18	SRA1 (ENSBIXG00005005637) #19	EIF4EBP3 (ENSBIXG00005006372)	ANKHD1 (ENSBIXG00005014460) #20	SLC4A9 (ENSBIXG00005001917) #21	HBEGF (ENSBIXG00005014069) #22	PFDN1 (ENSBIXG00005014050) #23	CYSTM1 (ENSBIXG00005007492) #24	IGIP (ENSBIXG00005014015) #25	PURA (ENSBIXG00005013997)	NRG2 (ENSBIXG00005013932) #26	PSD2 (ENSBIXG00005013774) #27	CXXC5 (ENSBIXG00005013725) #28	UBE2D2 (ENSBIXG00005006730) #29	STING1 (ENSBIXG00005013611) #30	SMIM33 (ENSBIXG00005013605) #31	ENSBIXG00005013583 #32	DNAJC18 (ENSBIXG00005001639) #33	SPATA24 (ENSBIXG00005013507) #34	PROB1 (ENSBIXG00005013484) #35	MZB1 (ENSBIXG00005013472) #36
American bison	MODERN SPECIES	3206	HARS2 (ENSBBBG00000011918) #7	HARS1 (ENSBBBG00000012076) #8	DND1 (ENSBBBG00000012101) #9	WDR55 (ENSBBBG00000012117) #10	IK (ENSBBBG00000012141) #11	ENSBBBG00000012154 #12	TMCO6 (ENSBBBG00000012174) #13	CD14 (ENSBBBG00000012180) #14	SLC35A4 (ENSBBBG00000002292)	ENSBBBG00000012186 #16	APBB3 (ENSBBBG00000012269) #18	SRA1 (ENSBBBG00000012282) #19	EIF4EBP3 (ENSBBBG00000002315)	ANKHD1 (ENSBBBG00000012344) #20	SLC4A9 (ENSBBBG00000002354) #21	HBEGF (ENSBBBG00000008497) #22	ENSBBBG00000002363 #23	CYSTM1 (ENSBBBG00000012408) #24	IGIP (ENSBBBG00000012411) #25	PURA (ENSBBBG00000012417)	NRG2 (ENSBBBG00000012555) #26	PSD2 (ENSBBBG00000012585) #27	CXXC5 (ENSBBBG00000002415) #28	ENSBBBG00000012599	UBE2D2 (ENSBBBG00000012623) #29	STING1 (ENSBBBG00000012687) #30	ENSBBBG00000012691 #31	ENSBBBG00000012696 #32	DNAJC18 (ENSBBBG00000012702) #33	SPATA24 (ENSBBBG00000012716) #34	PROB1 (ENSBBBG00000012723) #35
Siberian musk deer	MODERN SPECIES	49	HARS2 (ENSMMSG00000000917) #7	HARS1 (ENSMMSG00000001462) #8	DND1 (ENSMMSG00000001574) #9	WDR55 (ENSMMSG00000001588) #10	ENSMMSG00000001604 #11	NDUFA2 (ENSMMSG00000001623) #12	TMCO6 (ENSMMSG00000001639) #13	CD14 (ENSMMSG00000001661) #14	ENSMMSG00000001668	SLC35A4 (ENSMMSG00000001680)	ENSMMSG00000001686 #16	APBB3 (ENSMMSG00000001709) #18	ENSMMSG00000001739 #19	ANKHD1 (ENSMMSG00000001892) #20	SLC4A9 (ENSMMSG00000002111) #21	HBEGF (ENSMMSG00000002315) #22	PFDN1 (ENSMMSG00000002336) #23	CYSTM1 (ENSMMSG00000002355) #24	ENSMMSG00000002371	NRG2 (ENSMMSG00000002477) #26	PSD2 (ENSMMSG00000003269) #27	CXXC5 (ENSMMSG00000003284) #28	UBE2D2 (ENSMMSG00000003300) #29	STING1 (ENSMMSG00000003314) #30	SMIM33 (ENSMMSG00000003338) #31	ECSCR (ENSMMSG00000003351) #32	DNAJC18 (ENSMMSG00000003367) #33	SPATA24 (ENSMMSG00000003392) #34	PROB1 (ENSMMSG00000003416) #35	MZB1 (ENSMMSG00000003427) #36	SLC23A1 (ENSMMSG00000003441) #37
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00390000008610.a.b.a.a.a	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00960000191809	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a.t #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34
Blue whale	MODERN SPECIES	14	HARS2 (ENSBMSG00010001652) #7	HARS1 (ENSBMSG00010001483) #8	DND1 (ENSBMSG00010001404) #9	WDR55 (ENSBMSG00010001394) #10	IK (ENSBMSG00010001362) #11	NDUFA2 (ENSBMSG00010001334) #12	TMCO6 (ENSBMSG00010001310) #13	CD14 (ENSBMSG00010001298) #14	ENSBMSG00010001283	SLC35A4 (ENSBMSG00010001275)	APBB3 (ENSBMSG00010001042) #18	SRA1 (ENSBMSG00010000944) #19	EIF4EBP3 (ENSBMSG00010000927)	ANKHD1 (ENSBMSG00010000466) #20	SLC4A9 (ENSBMSG00010000180) #21	HBEGF (ENSBMSG00010000125) #22	PFDN1 (ENSBMSG00010000082) #23	ENSBMSG00010004032	CYSTM1 (ENSBMSG00010003980) #24	IGIP (ENSBMSG00010003972) #25	PURA (ENSBMSG00010003965)	ENSBMSG00010003957	NRG2 (ENSBMSG00010003458) #26	PSD2 (ENSBMSG00010003400) #27	CXXC5 (ENSBMSG00010003384) #28	ENSBMSG00010003376	UBE2D2 (ENSBMSG00010003349) #29	STING1 (ENSBMSG00010003311) #30	SMIM33 (ENSBMSG00010003288) #31	ECSCR (ENSBMSG00010003238) #32	DNAJC18 (ENSBMSG00010003221) #33
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00390000008610.a.b.a.a.a	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00390000002565.z	ENSGT00940000153169.A.b.a.s.a #29	ENSGT00940000153169.A.b.a.t #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.o #12	ENSGT00390000006178.p #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00390000002565.z	ENSGT00940000153169.A.b.a.s.a #29	ENSGT00940000153169.A.b.a.t #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34
Dolphin	MODERN SPECIES	3482								ENSTTRG00000005579 #12	ENSTTRG00000005578 #13	CD14 (ENSTTRG00000005577) #14	SLC35A4 (ENSTTRG00000005576)	APBB3 (ENSTTRG00000005575) #18	SRA1 (ENSTTRG00000005574) #19	ANKHD1 (ENSTTRG00000005573) #20	SLC4A9 (ENSTTRG00000005572) #21	HBEGF (ENSTTRG00000005571) #22
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.p #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000228540	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00390000002565.z	ENSGT00940000153169.A.b.a.s.a #29	ENSGT00940000153169.A.b.a.t #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178.p #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT01010000228540	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00390000001137 #25	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00390000002565.z	ENSGT00940000153169.A.b.a.s.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35
Narwhal	MODERN SPECIES	298	HARS2 (ENSMMNG00015001750) #7	HARS1 (ENSMMNG00015001637) #8	DND1 (ENSMMNG00015001560) #9	WDR55 (ENSMMNG00015001531) #10	IK (ENSMMNG00015001473) #11	NDUFA2 (ENSMMNG00015001429) #12	TMCO6 (ENSMMNG00015001390) #13	CD14 (ENSMMNG00015001369) #14	SLC35A4 (ENSMMNG00015001351)	ENSMMNG00015001341 #16	APBB3 (ENSMMNG00015001198) #18	SRA1 (ENSMMNG00015001114) #19	EIF4EBP3 (ENSMMNG00015001098)	ANKHD1 (ENSMMNG00015000921) #20	SLC4A9 (ENSMMNG00015000761) #21	HBEGF (ENSMMNG00015000720) #22	PFDN1 (ENSMMNG00015000703) #23	CYSTM1 (ENSMMNG00015000689) #24	IGIP (ENSMMNG00015000654) #25	PURA (ENSMMNG00015000640)	NRG2 (ENSMMNG00015000528) #26	PSD2 (ENSMMNG00015000419) #27	CXXC5 (ENSMMNG00015000398) #28	ENSMMNG00015000385	STING1 (ENSMMNG00015000336) #30	SMIM33 (ENSMMNG00015000307) #31	ECSCR (ENSMMNG00015000237) #32	UBE2D2 (ENSMMNG00015000165) #29	DNAJC18 (ENSMMNG00015000117) #33	SPATA24 (ENSMMNG00015000065) #34	PROB1 (ENSMMNG00015000031) #35
Beluga whale	MODERN SPECIES	34	HARS2 (ENSDLEG00000000760) #7	HARS1 (ENSDLEG00000000481) #8	DND1 (ENSDLEG00000000417) #9	WDR55 (ENSDLEG00000000395) #10	IK (ENSDLEG00000000321) #11	NDUFA2 (ENSDLEG00000000298) #12	TMCO6 (ENSDLEG00000000144) #13	CD14 (ENSDLEG00000006416) #14	SLC35A4 (ENSDLEG00000006412)	ENSDLEG00000006408 #16	ENSDLEG00000006390	APBB3 (ENSDLEG00000006320) #18	SRA1 (ENSDLEG00000006306) #19	ANKHD1 (ENSDLEG00000005662) #20	SLC4A9 (ENSDLEG00000005426) #21	HBEGF (ENSDLEG00000005405) #22	PFDN1 (ENSDLEG00000005390) #23	ENSDLEG00000005377 #24	NRG2 (ENSDLEG00000005362) #26	PSD2 (ENSDLEG00000005350) #27	CXXC5 (ENSDLEG00000005341) #28	ENSDLEG00000005337	ENSDLEG00000005336	UBE2D2 (ENSDLEG00000005329) #29	TMEM173 (ENSDLEG00000005294) #30	SMIM33 (ENSDLEG00000005289) #31	ECSCR (ENSDLEG00000005260) #32	DNAJC18 (ENSDLEG00000005242) #33	SPATA24 (ENSDLEG00000005227) #34	PROB1 (ENSDLEG00000005217) #35	MZB1 (ENSDLEG00000005215) #36
Vaquita	MODERN SPECIES	14	HARS2 (ENSPSNG00000003489) #7	HARS1 (ENSPSNG00000009786) #8	DND1 (ENSPSNG00000010011) #9	WDR55 (ENSPSNG00000010108) #10	IK (ENSPSNG00000010172) #11	NDUFA2 (ENSPSNG00000010299) #12	TMCO6 (ENSPSNG00000010357) #13	CD14 (ENSPSNG00000010424) #14	ENSPSNG00000010450 #16	ENSPSNG00000010492	APBB3 (ENSPSNG00000010584) #18	SRA1 (ENSPSNG00000011312) #19	EIF4EBP3 (ENSPSNG00000011416)	ANKHD1 (ENSPSNG00000011482) #20	ENSPSNG00000011656 #21	HBEGF (ENSPSNG00000011755) #22	PFDN1 (ENSPSNG00000011822) #23	CYSTM1 (ENSPSNG00000011901) #24	IGIP (ENSPSNG00000011994) #25	PURA (ENSPSNG00000012015)	NRG2 (ENSPSNG00000012204) #26	PSD2 (ENSPSNG00000012963) #27	CXXC5 (ENSPSNG00000013003) #28	ENSPSNG00000013045	UBE2D2 (ENSPSNG00000013106) #29	STING1 (ENSPSNG00000013280) #30	SMIM33 (ENSPSNG00000013451) #31	ECSCR (ENSPSNG00000013503) #32	DNAJC18 (ENSPSNG00000013667) #33	SPATA24 (ENSPSNG00000013749) #34	PROB1 (ENSPSNG00000013876) #35
Sperm whale	MODERN SPECIES	212															SLC4A9 (ENSPCTG00005013257) #21	HBEGF (ENSPCTG00005013143) #22
Atlantogenata	ANCESTRAL SPECIES		ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00940000158778.l #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Xenarthra	ANCESTRAL SPECIES	33	ENSGT00390000010712	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000171414	ENSGT00950000183162.a.a	ENSGT00940000158778.k #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Armadillo	MODERN SPECIES	3726	ZMAT2 (ENSDNOG00000015171)	HARS2 (ENSDNOG00000015148) #7	HARS1 (ENSDNOG00000015147) #8	DND1 (ENSDNOG00000013017) #9	ENSDNOG00000009727 #11	NDUFA2 (ENSDNOG00000009777) #12	TMCO6 (ENSDNOG00000009762) #13	CD14 (ENSDNOG00000039061) #14	ENSDNOG00000048239	SLC35A4 (ENSDNOG00000014192)	ENSDNOG00000038827 #16	APBB3 (ENSDNOG00000014174) #18	SRA1 (ENSDNOG00000045277) #19	ANKHD1 (ENSDNOG00000014116) #20	SLC4A9 (ENSDNOG00000014958) #21	HBEGF (ENSDNOG00000037258) #22	PFDN1 (ENSDNOG00000033107) #23	ENSDNOG00000018450	PURA (ENSDNOG00000014337)	ENSDNOG00000002541 #26	PSD2 (ENSDNOG00000046231) #27	CXXC5 (ENSDNOG00000008161) #28	UBE2D2 (ENSDNOG00000034829) #29	SMIM33 (ENSDNOG00000034598) #31	ECSCR (ENSDNOG00000039753) #32	DNAJC18 (ENSDNOG00000044110) #33	SPATA24 (ENSDNOG00000049247) #34	PROB1 (ENSDNOG00000044909) #35	MZB1 (ENSDNOG00000043411) #36	SLC23A1 (ENSDNOG00000005363) #37	PAIP2 (ENSDNOG00000039771)
Afrotheria	ANCESTRAL SPECIES	7	ENSGT00390000010712	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00940000158778.l #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00940000164708	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a	ENSGT00940000153322.B
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT00390000010712	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00390000009262	ENSGT00950000182827.F	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00500000045016 #24	ENSGT00940000158778.l #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00940000164708	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a	ENSGT00940000153322.B
Elephant	MODERN SPECIES	2	HARS2 (ENSLAFG00000018600) #7	HARS1 (ENSLAFG00000008163) #8	DND1 (ENSLAFG00000008161) #9	WDR55 (ENSLAFG00000008159) #10	IK (ENSLAFG00000008152) #11	NDUFA2 (ENSLAFG00000013494) #12	TMCO6 (ENSLAFG00000013487) #13	ENSLAFG00000028921 #14	ENSLAFG00000031861 #14	ENSLAFG00000027299	SLC35A4 (ENSLAFG00000021736)	APBB3 (ENSLAFG00000005134) #18	SRA1 (ENSLAFG00000020802) #19	ANKHD1 (ENSLAFG00000005337) #20	SLC4A9 (ENSLAFG00000001329) #21	HBEGF (ENSLAFG00000008592) #22	ENSLAFG00000008587 #23	CYSTM1 (ENSLAFG00000003119) #24	NRG2 (ENSLAFG00000016055) #26	PSD2 (ENSLAFG00000010206) #27	CXXC5 (ENSLAFG00000011784) #28	UBE2D2 (ENSLAFG00000006878) #29	STING1 (ENSLAFG00000009970) #30	SMIM33 (ENSLAFG00000028766) #31	ECSCR (ENSLAFG00000032779) #32	DNAJC18 (ENSLAFG00000009966) #33	ENSLAFG00000009960	MZB1 (ENSLAFG00000028096) #36	SLC23A1 (ENSLAFG00000009958) #37	PAIP2 (ENSLAFG00000025741)	MATR3 (ENSLAFG00000013047)
Hyrax	MODERN SPECIES	10362															SLC4A9 (ENSPCAG00000007548) #21	HBEGF (ENSPCAG00000007527) #22
Tenrec	MODERN SPECIES	1474																HBEGF (ENSETEG00000005192) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340.b	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Opossum	MODERN SPECIES		ENSMODG00000038324	ENSMODG00000043385	HARS2 (ENSMODG00000011309) #7	HARS1 (ENSMODG00000011335) #8	DND1 (ENSMODG00000041629) #9	WDR55 (ENSMODG00000050628) #10	IK (ENSMODG00000011433) #11	NDUFA2 (ENSMODG00000011446) #12	TMCO6 (ENSMODG00000011453) #13	ENSMODG00000023773 #14	SLC35A4 (ENSMODG00000023774)	ENSMODG00000023775 #16	APBB3 (ENSMODG00000011490) #18	EIF4EBP3 (ENSMODG00000042390)	ANKHD1 (ENSMODG00000011596) #20	HBEGF (ENSMODG00000011701) #22	PFDN1 (ENSMODG00000037252) #23	ENSMODG00000041122	PURA (ENSMODG00000011723)	NRG2 (ENSMODG00000011737) #26	PSD2 (ENSMODG00000011765) #27	ENSMODG00000047949	CXXC5 (ENSMODG00000011772) #28	UBE2D2 (ENSMODG00000049776) #29	STING1 (ENSMODG00000011792) #30	ENSMODG00000048230 #31	ENSMODG00000042045 #32	DNAJC18 (ENSMODG00000011813) #33	SPATA24 (ENSMODG00000011816) #34	ENSMODG00000045753 #35	PAIP2 (ENSMODG00000011895)
Marsupialia_b	ANCESTRAL SPECIES	21	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.j #23	ENSGT00940000165340.b	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00730000111496 #35	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Diprotodontia	ANCESTRAL SPECIES	57	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.j #23	ENSGT00940000165340.b	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Diprotodontia_a	ANCESTRAL SPECIES	54	ENSGT00390000005922.b.d.b.b #7	ENSGT00390000005922.b.d.b.a #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786.j #23	ENSGT00940000165340.b.a	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000006836 #31	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Common wonbat	MODERN SPECIES	727														ANKHD1 (ENSVURG00010009777) #20	SLC4A9 (ENSVURG00010009637) #21	HBEGF (ENSVURG00010009612) #22	ENSVURG00010009607 #23	ENSVURG00010009595	PURA (ENSVURG00010009592)	NRG2 (ENSVURG00010009563) #26	PSD2 (ENSVURG00010009553) #27	CXXC5 (ENSVURG00010009547) #28	ENSVURG00010009542 #29	STING1 (ENSVURG00010009534) #30	ENSVURG00010009531 #31	ENSVURG00010009484 #32	DNAJC18 (ENSVURG00010009447) #33	SPATA24 (ENSVURG00010009436) #34	PAIP2 (ENSVURG00010009428)	MATR3 (ENSVURG00010009401)	SIL1 (ENSVURG00010009379)
koala	MODERN SPECIES	107	HARS2 (ENSPCIG00000019291) #7	HARS1 (ENSPCIG00000017745) #8	DND1 (ENSPCIG00000017692) #9	WDR55 (ENSPCIG00000037308) #10	IK (ENSPCIG00000017488) #11	NDUFA2 (ENSPCIG00000017487) #12	TMCO6 (ENSPCIG00000017486) #13	ENSPCIG00000031240 #14	SLC35A4 (ENSPCIG00000017484)	ENSPCIG00000017483 #16	APBB3 (ENSPCIG00000017478) #18	SRA1 (ENSPCIG00000017474) #19	EIF4EBP3 (ENSPCIG00000017473)	ANKHD1 (ENSPCIG00000016104) #20	SLC4A9 (ENSPCIG00000016088) #21	HBEGF (ENSPCIG00000016081) #22	ENSPCIG00000016076 #23	ENSPCIG00000016074	PURA (ENSPCIG00000016067)	NRG2 (ENSPCIG00000016063) #26	PSD2 (ENSPCIG00000016053) #27	CXXC5 (ENSPCIG00000016047) #28	UBE2D2 (ENSPCIG00000016045) #29	STING1 (ENSPCIG00000016041) #30	ENSPCIG00000016040 #31	ENSPCIG00000016039 #32	DNAJC18 (ENSPCIG00000016037) #33	ENSPCIG00000035807 #34	MZB1 (ENSPCIG00000016030) #36	SLC23A1 (ENSPCIG00000015998) #37	PAIP2 (ENSPCIG00000015986)
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000032119	ENSSHAG00000031663	HARS2 (ENSSHAG00000016503) #7	HARS1 (ENSSHAG00000027068) #8	WDR55 (ENSSHAG00000022565) #10	IK (ENSSHAG00000016432) #11	NDUFA2 (ENSSHAG00000028938) #12	TMCO6 (ENSSHAG00000016414) #13	ENSSHAG00000016390 #14	SLC35A4 (ENSSHAG00000023193)	SRA1 (ENSSHAG00000016315) #19	APBB3 (ENSSHAG00000032009) #18	EIF4EBP3 (ENSSHAG00000022743)	ANKHD1 (ENSSHAG00000016083) #20	SLC4A9 (ENSSHAG00000015856) #21	HBEGF (ENSSHAG00000015758) #22	PFDN1 (ENSSHAG00000030589) #23	ENSSHAG00000021280	PURA (ENSSHAG00000026534)	NRG2 (ENSSHAG00000013720) #26	PSD2 (ENSSHAG00000013496) #27	CXXC5 (ENSSHAG00000012293) #28	UBE2D2 (ENSSHAG00000029395) #29	STING1 (ENSSHAG00000011318) #30	ENSSHAG00000011155 #32	DNAJC18 (ENSSHAG00000010946) #33	SPATA24 (ENSSHAG00000010793) #34	ENSSHAG00000027756 #35	MZB1 (ENSSHAG00000021120) #36	SLC23A1 (ENSSHAG00000010598) #37	PAIP2 (ENSSHAG00000010331)
Platypus	MODERN SPECIES	85	ENSOANG00000043663	ZMAT2 (ENSOANG00000007213)	HARS2 (ENSOANG00000004587) #7	HARS1 (ENSOANG00000003035) #8	DND1 (ENSOANG00000037907) #9	WDR55 (ENSOANG00000037162) #10	ENSOANG00000042669 #11	ENSOANG00000011664 #12	TMCO6 (ENSOANG00000041061) #13	ENSOANG00000036493 #14	ENSOANG00000038540 #16	APBB3 (ENSOANG00000020608) #18	SRA1 (ENSOANG00000046726) #19	ANKHD1 (ENSOANG00000001493) #20	SLC4A9 (ENSOANG00000037296) #21	ENSOANG00000045779 #22	PFDN1 (ENSOANG00000050671) #23	ENSOANG00000039497	PURA (ENSOANG00000043768)	NRG2 (ENSOANG00000047911) #26	PSD2 (ENSOANG00000000838) #27	CXXC5 (ENSOANG00000038584) #28	ENSOANG00000040467 #29	STING1 (ENSOANG00000022174) #30	DNAJC18 (ENSOANG00000006949) #33	ENSOANG00000045715 #34	ENSOANG00000047649 #35	MZB1 (ENSOANG00000036480) #36	SLC23A1 (ENSOANG00000044755) #37	PAIP2 (ENSOANG00000000641)	MATR3 (ENSOANG00000003713)
Sauria	ANCESTRAL SPECIES	17	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT01100000266844	ENSGT00390000005689 #14	ENSGT00940000174022	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a	ENSGT00940000153322.B
Archelosauria	ANCESTRAL SPECIES	15	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT01100000266844	ENSGT00390000005689 #14	ENSGT00940000174022	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT01030000235267	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Archosauria	ANCESTRAL SPECIES	46											ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00940000174022	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12
Aves	ANCESTRAL SPECIES	15											ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00940000174022	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12
Neognathae	ANCESTRAL SPECIES	14											ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00940000174022	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12
Galloanserae	ANCESTRAL SPECIES	14											ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00940000174022	ENSGT00390000005689 #14	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Anatidae	ANCESTRAL SPECIES	15	ENSGT00390000007125.b	ENSGT00940000156866	ENSGT00390000014165.c.a.a	ENSGT00530000063113.C	ENSGT00940000159044	ENSGT00940000157079.a	ENSGT00940000158396.i	ENSGT00940000156818	ENSGT00940000156641	ENSGT00940000159538	ENSGT00530000063812.B	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.c #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11	ENSGT00940000153727.a #10	ENSGT00940000159225 #9
Pink-footed goose	MODERN SPECIES	9	ATP6V0E1 (ENSABRG00000015067)	RPL26 (ENSABRG00000015065)	ERGIC1 (ENSABRG00000015062)	DUSP1 (ENSABRG00000015058)	NEURL1B (ENSABRG00000015049)	SH3PXD2B (ENSABRG00000015043)	STK10 (ENSABRG00000015024)	UBTD2 (ENSABRG00000015011)	ADRB2 (ENSABRG00000015003)	SH3TC2 (ENSABRG00000014994)	ENSABRG00000014990 #18	ENSABRG00000014986 ##18	SRA1 (ENSABRG00000014976) #19	ANKHD1 (ENSABRG00000014545) #20	SLC4A9 (ENSABRG00000014373) #21	HBEGF (ENSABRG00000014370) #22	PFDN1 (ENSABRG00000014368) #23	ENSABRG00000014366	PURA (ENSABRG00000014361)	NRG2 (ENSABRG00000014354) #26	PSD2 (ENSABRG00000014335) #27	CXXC5 (ENSABRG00000014324) #28	UBE2D2 (ENSABRG00000014309) #29	STING1 (ENSABRG00000014298) #30	SLC35A4 (ENSABRG00000014284)	ENSABRG00000014280 #14	TMCO6 (ENSABRG00000014248) #13	NDUFA2 (ENSABRG00000014237) #12	IK (ENSABRG00000014224) #11	WDR55 (ENSABRG00000014221) #10	DND1 (ENSABRG00000014212) #9
Duck	MODERN SPECIES	5	ERGIC1 (ENSAPLG00000015229)	DUSP1 (ENSAPLG00000015094)	NEURL1B (ENSAPLG00000014967)	ENSAPLG00000027587	ENSAPLG00000003738	STK10 (ENSAPLG00000003252)	ENSAPLG00000023824	UBTD2 (ENSAPLG00000003246)	ADRB2 (ENSAPLG00000001729)	SH3TC2 (ENSAPLG00000002842)	ENSAPLG00000002721 #19	EIF4EBP3 (ENSAPLG00000021696)	ENSAPLG00000024900 #20	ENSAPLG00000002418 #20	SLC4A9 (ENSAPLG00000015338) #21	HBEGF (ENSAPLG00000015272) #22	PFDN1 (ENSAPLG00000015211) #23	ENSAPLG00000019867	NRG2 (ENSAPLG00000015077) #26	ENSAPLG00000014766 #27	ENSAPLG00000023692 #27	PCDHAC2 (ENSAPLG00000003839)	PCDHAC1 (ENSAPLG00000029593)	ENSAPLG00000021486	ENSAPLG00000027449	ENSAPLG00000004083	PCDHB3 (ENSAPLG00000029860)	PCDHGC5 (ENSAPLG00000020916)	ENSAPLG00000019666	ENSAPLG00000020510	ENSAPLG00000004903
Phasianidae	ANCESTRAL SPECIES	14												ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.f #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00940000174022	ENSGT00390000005689 #14	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Phasianidae_b	ANCESTRAL SPECIES	43												ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.f #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00940000174022	ENSGT00390000005689 #14	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Chicken	MODERN SPECIES	4											ENSGALG00010008432 #18	ENSGALG00010008436 ##18	SRA1 (ENSGALG00010008449) #19	EIF4EBP3 (ENSGALG00010008618) #20	SLC4A9 (ENSGALG00010008683) #21	HBEGF (ENSGALG00010008688) #22	PFDN1 (ENSGALG00010008750) #23	CYSTM1 (ENSGALG00010008850)	PURA (ENSGALG00010012412)	NRG2 (ENSGALG00010011853) #26	PSD2 (ENSGALG00010011875) #27	CXXC5 (ENSGALG00010011913) #28	UBE2D2 (ENSGALG00010011952) #29	TMEM173 (ENSGALG00010011969) #30	SLC35A4 (ENSGALG00010008088)	ENSGALG00010008095	CD14 (ENSGALG00010011659) #14	TMCO6 (ENSGALG00010011670) #13	NDUFA2 (ENSGALG00010011685) #12	IK (ENSGALG00010011708) #11	WDR55 (ENSGALG00010011726) #10
Japanese quail	MODERN SPECIES	4											APBB3 (ENSCJPG00005013476) #18	ENSCJPG00005013475 ##18	SRA1 (ENSCJPG00005013474) #19	ANKHD1 (ENSCJPG00005012354) #20	SLC4A9 (ENSCJPG00005012347) #21	HBEGF (ENSCJPG00005012346) #22	PFDN1 (ENSCJPG00005012345) #23	ENSCJPG00005012344	PURA (ENSCJPG00005012342)	NRG2 (ENSCJPG00005012340) #26	PSD2 (ENSCJPG00005012267) #27	CXXC5 (ENSCJPG00005012265) #28	UBE2D2 (ENSCJPG00005012262) #29	STING1 (ENSCJPG00005012261) #30	ENSCJPG00005012260 #16	SLC35A4 (ENSCJPG00005012259)	ENSCJPG00005012258 #14	TMCO6 (ENSCJPG00005012257) #13	NDUFA2 (ENSCJPG00005012256) #12	IK (ENSCJPG00005012255) #11	WDR55 (ENSCJPG00005012254) #10
Neognathae_b	ANCESTRAL SPECIES	16												ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00940000159725.e.b.b	ENSGT00940000161193.e.b	ENSGT01090000260555	ENSGT00940000161193.e.a.a	ENSGT00940000165142	ENSGT00940000160554	ENSGT00940000163564.a	ENSGT00940000163777.b.f	ENSGT00390000010712	ENSGT00390000005922.a.b ##8	ENSGT00390000005922.a.a ##8	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00940000161193.e.b	ENSGT01090000260555	ENSGT00940000161193.e.a.a	ENSGT00940000165142	ENSGT00940000160554	ENSGT00940000163564.a	ENSGT00940000163777.b.f	ENSGT00390000010712.q	ENSGT00390000010712.r	ENSGT00390000005922.a.b ##8	ENSGT00390000005922.a.a ##8	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00940000160541	ENSGT00940000160487	ENSGT00980000199037	ENSGT00940000160554	ENSGT00940000165142	ENSGT00940000163564.a	ENSGT00940000163777.b.f	ENSGT00390000010712.q	ENSGT00390000010712.r	ENSGT00390000005922.a.b ##8	ENSGT00390000005922.a.a ##8	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Medium ground finch	MODERN SPECIES	89													ENSGFOG00000002411 #18	ANKHD1 (ENSGFOG00000002712) #20	SLC4A9 (ENSGFOG00000008117) #21	HBEGF (ENSGFOG00000008151) #22	PFDN1 (ENSGFOG00000008176) #23	ENSGFOG00000008184	PURA (ENSGFOG00000008189)	NRG2 (ENSGFOG00000008197) #26	ENSGFOG00000008226	ENSGFOG00000008235	PSD2 (ENSGFOG00000008260) #27	CXXC5 (ENSGFOG00000009292) #28	UBE2D2 (ENSGFOG00000009297) #29	STING1 (ENSGFOG00000009303) #30	SLC35A4 (ENSGFOG00000009353)	ENSGFOG00000009360 #14	TMCO6 (ENSGFOG00000009366) #13	NDUFA2 (ENSGFOG00000009378) #12	IK (ENSGFOG00000009385) #11
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00940000161193.e.b	ENSGT01090000260555	ENSGT00940000161193.e.a.a	ENSGT00980000199037	ENSGT00940000160554	ENSGT00940000165142	ENSGT00940000163564.a	ENSGT00940000163777.b.f	ENSGT00390000010712.q	ENSGT00390000005922.a.b ##8	ENSGT00390000005922.a.a ##8	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT01100000266844	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11
Zebra finch	MODERN SPECIES	4	ENSTGUG00000026303	ENSTGUG00000026370	ENSTGUG00000029658	ENSTGUG00000029528	ENSTGUG00000028564	ENSTGUG00000026065	ENSTGUG00000024173	PCDHAC2 (ENSTGUG00000001700)	ENSTGUG00000020343	ENSTGUG00000001698	ZMAT2 (ENSTGUG00000001696)	ENSTGUG00000001688 ##8	APBB3 (ENSTGUG00000001677) #18	ANKHD1 (ENSTGUG00000001656) #20	SLC4A9 (ENSTGUG00000001638) #21	HBEGF (ENSTGUG00000001634) #22	ENSTGUG00000024812	PFDN1 (ENSTGUG00000001632) #23	ENSTGUG00000001629	PURA (ENSTGUG00000001628)	NRG2 (ENSTGUG00000001621) #26	PSD2 (ENSTGUG00000001610) #27	ENSTGUG00000027924	CXXC5 (ENSTGUG00000001608) #28	UBE2D2 (ENSTGUG00000001604) #29	STING1 (ENSTGUG00000001599) #30	ENSTGUG00000022952 #16	SLC35A4 (ENSTGUG00000001597)	ENSTGUG00000001596 #14	ENSTGUG00000024390	TMCO6 (ENSTGUG00000001595) #13
Common canary	MODERN SPECIES	16	ENSSCAG00000008730	ENSSCAG00000008748	ENSSCAG00000008752	PCDHAC2 (ENSSCAG00000008754)	PCDHAC1 (ENSSCAG00000008756)	ENSSCAG00000008761	ENSSCAG00000008764	ENSSCAG00000008767	ZMAT2 (ENSSCAG00000008771)	ENSSCAG00000008779 ##8	ENSSCAG00000008794 ##8	APBB3 (ENSSCAG00000008807) #18	SRA1 (ENSSCAG00000008837) #19	ANKHD1 (ENSSCAG00000008848) #20	SLC4A9 (ENSSCAG00000009029) #21	HBEGF (ENSSCAG00000009094) #22	PFDN1 (ENSSCAG00000009109) #23	ENSSCAG00000009115	NRG2 (ENSSCAG00000009124) #26	PSD2 (ENSSCAG00000009151) #27	CXXC5 (ENSSCAG00000009283) #28	UBE2D2 (ENSSCAG00000009289) #29	ENSSCAG00000009301	SLC35A4 (ENSSCAG00000009308)	ENSSCAG00000009315 #14	TMCO6 (ENSSCAG00000009320) #13	NDUFA2 (ENSSCAG00000009323) #12	IK (ENSSCAG00000009331) #11	WDR55 (ENSSCAG00000009338) #10	DND1 (ENSSCAG00000009341) #9	LCP2 (ENSSCAG00000009347)
Flycatcher	MODERN SPECIES	4	SKP1 (ENSFALG00000007917)	TCF7 (ENSFALG00000023633)	VDAC1 (ENSFALG00000007902)	C5orf15 (ENSFALG00000028754)	FSTL4 (ENSFALG00000001023)	ENSFALG00000028787	RAPGEF6 (ENSFALG00000001033)	ENSFALG00000001039	ENSFALG00000001062	ENSFALG00000015042	P4HA2 (ENSFALG00000001103)	APBB3 (ENSFALG00000009289) #18	ENSFALG00000028095 ##18	SRA1 (ENSFALG00000009306) #19	ANKHD1 (ENSFALG00000009315) #20	HBEGF (ENSFALG00000009396) #22	PFDN1 (ENSFALG00000027730) #23	ENSFALG00000009420	PURA (ENSFALG00000015025)	NRG2 (ENSFALG00000009428) #26	PSD2 (ENSFALG00000009445) #27	ENSFALG00000028140	CXXC5 (ENSFALG00000009467) #28	ENSFALG00000025212	UBE2D2 (ENSFALG00000009474) #29	STING1 (ENSFALG00000009482) #30	ENSFALG00000023754 #16	SLC35A4 (ENSFALG00000009489)	ENSFALG00000015038 #14	TMCO6 (ENSFALG00000009495) #13	ENSFALG00000027932 #12
Great tit	MODERN SPECIES	4	FCHSD1 (ENSPMJG00000008043)	RELL2 (ENSPMJG00000008040)	HDAC3 (ENSPMJG00000008036)	PCDHGC5 (ENSPMJG00000008025)	ENSPMJG00000008018	ENSPMJG00000008015	ENSPMJG00000007976	ENSPMJG00000007975	ZMAT2 (ENSPMJG00000007974)	ENSPMJG00000007968 ##8	APBB3 (ENSPMJG00000007966) #18	SRA1 (ENSPMJG00000007965) #19	ANKHD1 (ENSPMJG00000000454) #20	ENSPMJG00000000384	SLC4A9 (ENSPMJG00000000108) #21	HBEGF (ENSPMJG00000000087) #22	PFDN1 (ENSPMJG00000000081) #23	ENSPMJG00000000062	NRG2 (ENSPMJG00000014563) #26	PSD2 (ENSPMJG00000014562) #27	CXXC5 (ENSPMJG00000014559) #28	UBE2D2 (ENSPMJG00000014558) #29	STING1 (ENSPMJG00000014557) #30	ENSPMJG00000014556 #16	SLC35A4 (ENSPMJG00000014555)	ENSPMJG00000014554 #14	TMCO6 (ENSPMJG00000014553) #13	NDUFA2 (ENSPMJG00000014552) #12	IK (ENSPMJG00000014551) #11	WDR55 (ENSPMJG00000014550) #10	DND1 (ENSPMJG00000014549) #9
Neognathae_c	ANCESTRAL SPECIES	19													ENSGT00390000000002.a.a.b #18	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00390000007844 #16	ENSGT00950000182827.F	ENSGT00390000005689 #14	ENSGT00390000008104 #13	ENSGT00390000006178 #12	ENSGT00940000153727.b #11	ENSGT00940000153727.a #10
Kakapo	MODERN SPECIES	6	SLU7 (ENSSHBG00005018225)	ENSSHBG00005018236	ATP10B (ENSSHBG00005018243)	ENSSHBG00005018256	GABRB2 (ENSSHBG00005018267)	GABRA6 (ENSSHBG00005018276)	GABRA1 (ENSSHBG00005018278)	GABRG2 (ENSSHBG00005018279)	CCNG1 (ENSSHBG00005018287)	NUDCD2 (ENSSHBG00005018295)	HMMR (ENSSHBG00005018298)	MAT2B (ENSSHBG00005018308)	APBB3 (ENSSHBG00005018317) #18	ANKHD1 (ENSSHBG00005018358) #20	SLC4A9 (ENSSHBG00005018532) #21	HBEGF (ENSSHBG00005000706) #22	PFDN1 (ENSSHBG00005000718) #23	ENSSHBG00005000731	PURA (ENSSHBG00005010650)	NRG2 (ENSSHBG00005010699) #26	PSD2 (ENSSHBG00005010803) #27	CXXC5 (ENSSHBG00005011229) #28	UBE2D2 (ENSSHBG00005011252) #29	STING1 (ENSSHBG00005011270) #30	SLC35A4 (ENSSHBG00005011293)	ENSSHBG00005011314 #14	ENSSHBG00005011387	TMCO6 (ENSSHBG00005011351) #13	NDUFA2 (ENSSHBG00005011398) #12	IK (ENSSHBG00005011411) #11	WDR55 (ENSSHBG00005011454) #10
Golden eagle	MODERN SPECIES	14												ENSACCG00020008344	APBB3 (ENSACCG00020008378) #18	ANKHD1 (ENSACCG00020008594) #20	SLC4A9 (ENSACCG00020008669) #21	HBEGF (ENSACCG00020008689) #22	PFDN1 (ENSACCG00020008700) #23	ENSACCG00020008707	PURA (ENSACCG00020008732)	NRG2 (ENSACCG00020008774) #26	PSD2 (ENSACCG00020008814) #27	CXXC5 (ENSACCG00020008847) #28	UBE2D2 (ENSACCG00020008885) #29	STING1 (ENSACCG00020008906) #30	ENSACCG00020008926 #16	SLC35A4 (ENSACCG00020008945)	ENSACCG00020008957 #14	TMCO6 (ENSACCG00020008973) #13	NDUFA2 (ENSACCG00020009004) #12	IK (ENSACCG00020009030) #11	WDR55 (ENSACCG00020009049) #10
African ostrich	MODERN SPECIES	391											ENSSCUG00000003152	APBB3 (ENSSCUG00000003182) #18	SRA1 (ENSSCUG00000003184) #19	ANKHD1 (ENSSCUG00000003276) #20	SLC4A9 (ENSSCUG00000003362) #21	HBEGF (ENSSCUG00000003364) #22	PFDN1 (ENSSCUG00000003365) #23	NRG2 (ENSSCUG00000003370) #26	PSD2 (ENSSCUG00000003371) #27
Australian saltwater crocodile	MODERN SPECIES	34	FCHSD1 (ENSCPRG00005002675)	RELL2 (ENSCPRG00005002667)	HDAC3 (ENSCPRG00005002653)	DIAPH1 (ENSCPRG00005002640)	ENSCPRG00005002623	ENSCPRG00005002622	PCDHGC5 (ENSCPRG00005002618)	PCDHGC3 (ENSCPRG00005002608)	ENSCPRG00005002603	ENSCPRG00005002594 #16	ENSCPRG00005002579 #18	ENSCPRG00005002570 #18	SRA1 (ENSCPRG00005002565) #19	ANKHD1 (ENSCPRG00005001236) #20	SLC4A9 (ENSCPRG00005001036) #21	HBEGF (ENSCPRG00005001024) #22	PFDN1 (ENSCPRG00005001017) #23	ENSCPRG00005001011	PURA (ENSCPRG00005000988)	ENSCPRG00005000983 #26	ENSCPRG00005000969 #26	PSD2 (ENSCPRG00005000956) #27	TMCO6 (ENSCPRG00005000926) #13	NDUFA2 (ENSCPRG00005000921) #12	IK (ENSCPRG00005000912) #11	WDR55 (ENSCPRG00005000864) #10	ENSCPRG00005000845	DND1 (ENSCPRG00005000831) #9	ENSCPRG00005000827 ##8	ENSCPRG00005000822 ##8	ZMAT2 (ENSCPRG00005000820)
Cryptodira	ANCESTRAL SPECIES	15	ENSGT00390000005922.b.d #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT01030000235267	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00390000005922.b.d #8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT01030000235267	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37
Emydidae	ANCESTRAL SPECIES	11	ENSGT00390000005922.b.d #8	ENSGT00940000159225 #9	ENSGT00990000210429	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00400000023549 #32	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT01030000235267	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
painted turtle	MODERN SPECIES	739	ENSCPBG00000007696 ##8	DND1 (ENSCPBG00000007689) #9	ENSCPBG00000007683	WDR55 (ENSCPBG00000007678) #10	IK (ENSCPBG00000007657) #11	NDUFA2 (ENSCPBG00000007654) #12	TMCO6 (ENSCPBG00000007651) #13	ENSCPBG00000007645 #14	SLC35A4 (ENSCPBG00000007626)	ENSCPBG00000007616 #16	APBB3 (ENSCPBG00000007598) #18	SRA1 (ENSCPBG00000007590) #19	EIF4EBP3 (ENSCPBG00000007581)	ANKHD1 (ENSCPBG00000007377) #20	SLC4A9 (ENSCPBG00000006627) #21	HBEGF (ENSCPBG00000006559) #22	PFDN1 (ENSCPBG00000006552) #23	ENSCPBG00000006542	PURA (ENSCPBG00000006537)	PSD2 (ENSCPBG00000006511) #27	CXXC5 (ENSCPBG00000006490) #28	UBE2D2 (ENSCPBG00000006467) #29	STING1 (ENSCPBG00000006346) #30	ENSCPBG00000006336	ECSCR (ENSCPBG00000006329) #32	DNAJC18 (ENSCPBG00000006324) #33	SPATA24 (ENSCPBG00000006316) #34	SLC23A1 (ENSCPBG00000006312) #37	PAIP2 (ENSCPBG00000006310)	MATR3 (ENSCPBG00000006303)	ENSCPBG00000006294
Three-toed box turtle	MODERN SPECIES	385	ENSTMTG00000017766 ##8	ENSTMTG00000017792 #8	DND1 (ENSTMTG00000017800) #9	ENSTMTG00000017817	WDR55 (ENSTMTG00000017827) #10	IK (ENSTMTG00000017875) #11	NDUFA2 (ENSTMTG00000018036) #12	TMCO6 (ENSTMTG00000018046) #13	ENSTMTG00000018073 #14	SLC35A4 (ENSTMTG00000018077)	ENSTMTG00000018086 #16	APBB3 (ENSTMTG00000018101) #18	SRA1 (ENSTMTG00000018138) #19	ANKHD1 (ENSTMTG00000018252) #20	SLC4A9 (ENSTMTG00000019564) #21	HBEGF (ENSTMTG00000019604) #22	ENSTMTG00000019614	ENSTMTG00000019622	PURA (ENSTMTG00000019631)	ENSTMTG00000019642 #26	PSD2 (ENSTMTG00000019659) #27	CXXC5 (ENSTMTG00000019700) #28	UBE2D2 (ENSTMTG00000019714) #29	STING1 (ENSTMTG00000019730) #30	DNAJC18 (ENSTMTG00000019787) #33	SPATA24 (ENSTMTG00000019798) #34	ENSTMTG00000019812	ENSTMTG00000019849	SLC23A1 (ENSTMTG00000019860) #37	MATR3 (ENSTMTG00000019874)	SIL1 (ENSTMTG00000019898)
Testudinidae	ANCESTRAL SPECIES	16	ENSGT00390000005922.b.c.a ##8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674 #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT01030000235267	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a
Goode s thornscrub tortoise	MODERN SPECIES	22	ZMAT2 (ENSGEVG00005017324)	ENSGEVG00005017128 ##8	DND1 (ENSGEVG00005017027) #9	WDR55 (ENSGEVG00005016998) #10	IK (ENSGEVG00005016907) #11	NDUFA2 (ENSGEVG00005016878) #12	TMCO6 (ENSGEVG00005016844) #13	ENSGEVG00005016827 #14	SLC35A4 (ENSGEVG00005016793)	ENSGEVG00005016777 #16	APBB3 (ENSGEVG00005016623) #18	SRA1 (ENSGEVG00005016589) #19	EIF4EBP3 (ENSGEVG00005016577)	ANKHD1 (ENSGEVG00005007715) #20	SLC4A9 (ENSGEVG00005005749) #21	HBEGF (ENSGEVG00005005517) #22	PFDN1 (ENSGEVG00005005492) #23	ENSGEVG00005005481	PURA (ENSGEVG00005005448)	ENSGEVG00005005426 #26	ENSGEVG00005005415	PSD2 (ENSGEVG00005005373) #27	CXXC5 (ENSGEVG00005005348) #28	UBE2D2 (ENSGEVG00005005330) #29	STING1 (ENSGEVG00005005182) #30	ENSGEVG00005005120	DNAJC18 (ENSGEVG00005005093) #33	SPATA24 (ENSGEVG00005005069) #34	ENSGEVG00005005011	MZB1 (ENSGEVG00005004979) #36	SLC23A1 (ENSGEVG00005004701) #37
Abingdon island giant tortoise	MODERN SPECIES	2197	ENSCABG00000018918 ##8	DND1 (ENSCABG00000018920) #9	WDR55 (ENSCABG00000018921) #10	ENSCABG00000018925	IK (ENSCABG00000018929) #11	NDUFA2 (ENSCABG00000018934) #12	TMCO6 (ENSCABG00000018938) #13	ENSCABG00000018941 #14	SLC35A4 (ENSCABG00000018943)	ENSCABG00000018952 #16	APBB3 (ENSCABG00000018955) #18	SRA1 (ENSCABG00000018965) #19	EIF4EBP3 (ENSCABG00000018968)	ANKHD1 (ENSCABG00000019023) #20	SLC4A9 (ENSCABG00000019325) #21	HBEGF (ENSCABG00000019335) #22	PFDN1 (ENSCABG00000019337) #23	ENSCABG00000019339	PURA (ENSCABG00000019340)	NRG2 (ENSCABG00000019342) #26	PSD2 (ENSCABG00000019344) #27
Chinese turtle	MODERN SPECIES	32													ENSPSIG00000017731 ##18	ANKHD1 (ENSPSIG00000016519) #20	SLC4A9 (ENSPSIG00000015407) #21	HBEGF (ENSPSIG00000014875) #22	PFDN1 (ENSPSIG00000014687) #23	NRG2 (ENSPSIG00000014674) #26	PSD2 (ENSPSIG00000014043) #27	ENSPSIG00000013963	CXXC5 (ENSPSIG00000013782) #28	STING1 (ENSPSIG00000013377) #30	ECSCR (ENSPSIG00000013085) #32	DNAJC18 (ENSPSIG00000012941) #33	SPATA24 (ENSPSIG00000012559) #34
Lepidosauria	ANCESTRAL SPECIES	37	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT01100000266844	ENSGT00390000005689 #14	ENSGT00940000174022	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000159674.b #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT00940000160925 #33	ENSGT00390000007817 #34	ENSGT00390000002716 #36	ENSGT00950000182953.C.d #37	ENSGT00390000017284.a.a	ENSGT00940000153322.B
Episquamata	ANCESTRAL SPECIES	1	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT01100000266844	ENSGT00390000005689 #14	ENSGT00940000174022	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00390000000973.a.b	ENSGT00390000018549	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a	ENSGT01030000234563.b.a.a
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00390000005922.b.c.a ##8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000005689 #14	ENSGT00940000174022	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000159674.b #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00390000000973.a.b	ENSGT00390000018549	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a
Elapidae	ANCESTRAL SPECIES	8	ENSGT00940000163777.b.f	ENSGT00390000010712	ENSGT00390000005922.b.c.b ##8	ENSGT00390000005922.b.c.a ##8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000159674.b #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000018549	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183067.a.a	ENSGT00950000183147.B
Elapidae_a	ANCESTRAL SPECIES	35	ENSGT00940000163777.b.f	ENSGT00390000010712	ENSGT00390000005922.b.c.b ##8	ENSGT00390000005922.b.c.a ##8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000159674.b #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000018549	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183067.a.a	ENSGT00950000183147.B
Acanthophiinae	ANCESTRAL SPECIES	35	ENSGT00940000163777.b.f	ENSGT00390000010712	ENSGT00390000005922.b.c.b ##8	ENSGT00390000005922.b.c.a ##8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00980000200052	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000159674.b #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000018549	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a	ENSGT01030000234563.b.a.a	ENSGT00950000183067.a.a	ENSGT00950000183147.B
Eastern brown snake	MODERN SPECIES	15	ENSPTXG00000002845	ENSPTXG00000002848	ZMAT2 (ENSPTXG00000002851)	ENSPTXG00000002853 ##8	ENSPTXG00000002856 ##8	DND1 (ENSPTXG00000002857) #9	WDR55 (ENSPTXG00000002858) #10	IK (ENSPTXG00000002939) #11	NDUFA2 (ENSPTXG00000002943) #12	TMCO6 (ENSPTXG00000002945) #13	ENSPTXG00000002947 #16	ENSPTXG00000002950 #18	SRA1 (ENSPTXG00000002952) #19	ANKHD1 (ENSPTXG00000002988) #20	SLC4A9 (ENSPTXG00000003327) #21	HBEGF (ENSPTXG00000003338) #22	PFDN1 (ENSPTXG00000003339) #23	PURA (ENSPTXG00000003343)	ENSPTXG00000003344 #26	ENSPTXG00000003346 #27	CXXC5 (ENSPTXG00000003348) #28	UBE2D2 (ENSPTXG00000003350) #29	KIAA0232 (ENSPTXG00000003351)	ENSPTXG00000003357	TADA2B (ENSPTXG00000003359)	GRPEL1 (ENSPTXG00000003361)	SORCS2 (ENSPTXG00000003364)	AFAP1 (ENSPTXG00000003371)	SYNDIG1 (ENSPTXG00000003373)	SEC23B (ENSPTXG00000003374)	ENSPTXG00000003375
Mainland tiger snake	MODERN SPECIES	45	ZMAT2 (ENSNSUG00000012409)	ENSNSUG00000012408 ##8	ENSNSUG00000012407 ##8	DND1 (ENSNSUG00000012406) #9	WDR55 (ENSNSUG00000012405) #10	ENSNSUG00000012404	IK (ENSNSUG00000012170) #11	NDUFA2 (ENSNSUG00000012168) #12	TMCO6 (ENSNSUG00000012103) #13	ENSNSUG00000012101 #16	ENSNSUG00000012100 #18	ENSNSUG00000012099 #18	SRA1 (ENSNSUG00000012098) #19	ANKHD1 (ENSNSUG00000010898) #20	SLC4A9 (ENSNSUG00000010884) #21	HBEGF (ENSNSUG00000010883) #22	PFDN1 (ENSNSUG00000010882) #23	ENSNSUG00000010881	PURA (ENSNSUG00000010880)	ENSNSUG00000010877 #26	ENSNSUG00000010876 #27	ENSNSUG00000010875	ENSNSUG00000010874 #27	ENSNSUG00000010870	ENSNSUG00000010868	CXXC5 (ENSNSUG00000010867) #28	UBE2D2 (ENSNSUG00000010864) #29	KIAA0232 (ENSNSUG00000010863)	ENSNSUG00000010861	TADA2B (ENSNSUG00000010860)	ENSNSUG00000010858
Blue-lipped sea krait	MODERN SPECIES	8881																HBEGF (ENSLLTG00000005817) #22
Indian cobra	MODERN SPECIES	2	ENSNNAG00000006328	ENSNNAG00000006343	ZMAT2 (ENSNNAG00000006363)	ENSNNAG00000006368 ##8	ENSNNAG00000006388 ##8	DND1 (ENSNNAG00000006412) #9	WDR55 (ENSNNAG00000006438) #10	IK (ENSNNAG00000006458) #11	NDUFA2 (ENSNNAG00000006480) #12	TMCO6 (ENSNNAG00000006492) #13	ENSNNAG00000006514 #16	APBB3 (ENSNNAG00000006528) #18	ENSNNAG00000006566 #19	ANKHD1 (ENSNNAG00000006769) #20	SLC4A9 (ENSNNAG00000009021) #21	HBEGF (ENSNNAG00000009351) #22	ENSNNAG00000009394	PURA (ENSNNAG00000009426)	ENSNNAG00000009430 #26	ENSNNAG00000009477 #27	ENSNNAG00000009542 #27	CXXC5 (ENSNNAG00000009581) #28	UBE2D2 (ENSNNAG00000009637) #29	KIAA0232 (ENSNNAG00000009728)	ENSNNAG00000009851	TADA2B (ENSNNAG00000009866)	GRPEL1 (ENSNNAG00000009878)	SORCS2 (ENSNNAG00000009900)	AFAP1 (ENSNNAG00000009998)	SYNDIG1 (ENSNNAG00000010041)	SEC23B (ENSNNAG00000010054)
Lizard	MODERN SPECIES	3	ENSACAG00000012768 ##8	ENSACAG00000012923 #14	ENSACAG00000012925 #9	WDR55 (ENSACAG00000035929) #10	IK (ENSACAG00000012937) #11	NDUFA2 (ENSACAG00000012978) #12	TMCO6 (ENSACAG00000012987) #13	ENSACAG00000013008 #14	ENSACAG00000038086	SLC35A4 (ENSACAG00000013009)	ENSACAG00000035509 #16	APBB3 (ENSACAG00000013016) #18	SRA1 (ENSACAG00000013148) #19	ANKHD1 (ENSACAG00000013168) #20	SLC4A9 (ENSACAG00000013391) #21	HBEGF (ENSACAG00000041727) #22	PFDN1 (ENSACAG00000013539) #23	ENSACAG00000041491	ENSACAG00000041642	ENSACAG00000029074	ENSACAG00000036766	ENSACAG00000043036 #26	ENSACAG00000002438 #26	PSD2 (ENSACAG00000002197) #27	CXXC5 (ENSACAG00000002186) #28	ENSACAG00000035766	UBE2D2 (ENSACAG00000002183) #29	STING1 (ENSACAG00000002140) #30	ENSACAG00000038413	ENSACAG00000043038	ENSACAG00000002137
Laterata	ANCESTRAL SPECIES	5	ENSGT00390000005922.b.c.a ##8	ENSGT00940000159225 #9	ENSGT00940000153727.a #10	ENSGT00940000153727.b #11	ENSGT00390000006178 #12	ENSGT00390000008104 #13	ENSGT01100000266844	ENSGT00390000005689 #14	ENSGT00940000174022	ENSGT00950000182827.F	ENSGT00390000007844 #16	ENSGT00390000000002.a.a.b #18	ENSGT00390000001803 #19	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340	ENSGT00950000183162.a.a	ENSGT00940000158778 #26	ENSGT00940000159674.a #27	ENSGT00940000154108.a #28	ENSGT00940000153169.A.b.a #29	ENSGT00390000008582 #30	ENSGT01030000235467	ENSGT00390000000973.a.b	ENSGT00390000018549	ENSGT00940000154521.A	ENSGT00940000157318	ENSGT00390000005589.a.a	ENSGT01030000234563.b.a.a
Common wall lizard	MODERN SPECIES	15	ZMAT2 (ENSPMRG00000008382)	ENSPMRG00000008400 ##8	ENSPMRG00000008433 ##8	DND1 (ENSPMRG00000008511) #9	IK (ENSPMRG00000008584) #11	NDUFA2 (ENSPMRG00000008790) #12	TMCO6 (ENSPMRG00000008797) #13	ENSPMRG00000008804	ENSPMRG00000008810 #14	SLC35A4 (ENSPMRG00000008812)	ENSPMRG00000008817 #16	APBB3 (ENSPMRG00000008830) #18	SRA1 (ENSPMRG00000008858) #19	ANKHD1 (ENSPMRG00000009470) #20	SLC4A9 (ENSPMRG00000012396) #21	HBEGF (ENSPMRG00000012412) #22	PFDN1 (ENSPMRG00000012416) #23	PURA (ENSPMRG00000012427)	NRG2 (ENSPMRG00000012435) #26	PSD2 (ENSPMRG00000012448) #27	ENSPMRG00000012459	ENSPMRG00000012466	ENSPMRG00000012472	CXXC5 (ENSPMRG00000012479) #28	ENSPMRG00000012483	ENSPMRG00000019443	UBE2D2 (ENSPMRG00000019454) #29	STING1 (ENSPMRG00000019479) #30	ENSPMRG00000019516	FAM193A (ENSPMRG00000019547)	KIAA0232 (ENSPMRG00000019692)
Argentine black and white tegu	MODERN SPECIES	36	ENSSMRG00000019036	ENSSMRG00000019035	ZMAT2 (ENSSMRG00000019034)	ENSSMRG00000019033 ##8	ENSSMRG00000019032 ##8	DND1 (ENSSMRG00000019031) #9	WDR55 (ENSSMRG00000019030) #10	NDUFA2 (ENSSMRG00000019029) #12	ENSSMRG00000019028	SLC35A4 (ENSSMRG00000019027)	ENSSMRG00000019026 #16	APBB3 (ENSSMRG00000019025) #18	SRA1 (ENSSMRG00000019024) #19	ANKHD1 (ENSSMRG00000018661) #20	SLC4A9 (ENSSMRG00000018652) #21	HBEGF (ENSSMRG00000018650) #22	PFDN1 (ENSSMRG00000018649) #23	ENSSMRG00000018648	PURA (ENSSMRG00000018647)	NRG2 (ENSSMRG00000018642) #26	PSD2 (ENSSMRG00000018324) #27	CXXC5 (ENSSMRG00000018322) #28	UBE2D2 (ENSSMRG00000018319) #29	STING1 (ENSSMRG00000018318) #30	ENSSMRG00000018317	FAM193A (ENSSMRG00000018161)	ENSSMRG00000018159	KIAA0232 (ENSSMRG00000018157)	ENSSMRG00000018156	TADA2B (ENSSMRG00000018155)	GRPEL1 (ENSSMRG00000018154)
tuatara	MODERN SPECIES	584				WDR55 (ENSSPUG00000015845) #10	IK (ENSSPUG00000015808) #11	NDUFA2 (ENSSPUG00000015789) #12	ENSSPUG00000015752 #14	SLC35A4 (ENSSPUG00000015743)	ENSSPUG00000015738 #16	APBB3 (ENSSPUG00000015675) #18	SRA1 (ENSSPUG00000015651) #19	EIF4EBP3 (ENSSPUG00000015644)	ENSSPUG00000015636 #20	ENSSPUG00000015537 #20	SLC4A9 (ENSSPUG00000015349) #21	HBEGF (ENSSPUG00000015304) #22	PFDN1 (ENSSPUG00000015297) #23	ENSSPUG00000015291	NRG2 (ENSSPUG00000015260) #26	PSD2 (ENSSPUG00000015223) #27
Anura	ANCESTRAL SPECIES	330												ENSGT00940000160970 #21	ENSGT00940000164917	ENSGT00940000165206	ENSGT00940000158334	ENSGT00940000156901.A #22	ENSGT00390000009786 #23
Frog	MODERN SPECIES	3	hnrnpa0 (ENSXETG00000046279)	clk1 (ENSXETG00000003831)	adamts2 (ENSXETG00000003829)	gfpt2 (ENSXETG00000003828)	ENSXETG00000037023	fam13b (ENSXETG00000003827)	wnt8a (ENSXETG00000003826)	nme5 (ENSXETG00000003825)	myot (ENSXETG00000018341)	cystm1 (ENSXETG00000025397)	ankhd1 (ENSXETG00000018337) #20	slc4a9 (ENSXETG00000018334) #21	dck.2 (ENSXETG00000018331)	hnrnph1 (ENSXETG00000018321)	rufy1 (ENSXETG00000018316)	hbegf (ENSXETG00000039798) #22	pfdn1 (ENSXETG00000018313) #23	tlx3 (ENSXETG00000018304)	ENSXETG00000041483	ENSXETG00000048954	gabrp (ENSXETG00000018298)	kcnip1 (ENSXETG00000018293)	kcnmb1 (ENSXETG00000035390)	lcp2 (ENSXETG00000032552)	foxi1 (ENSXETG00000025404)	dock2 (ENSXETG00000019922)	INSYN2B (ENSXETG00000025405)	ENSXETG00000040144	ENSXETG00000044631	spdl1 (ENSXETG00000019919)	slit3 (ENSXETG00000013676)
Leishan spiny toad	MODERN SPECIES	6	NUP205 (ENSLLEG00000026883)	SLC13A4 (ENSLLEG00000027275)	ENSLLEG00000027382	FAM180A (ENSLLEG00000027403)	PANK3 (ENSLLEG00000027451)	ENSLLEG00000027707	PRDM4 (ENSLLEG00000027734)	ENSLLEG00000027838	ENSLLEG00000028289	ENSLLEG00000028473	ENSLLEG00000028499	ENSLLEG00000028581	ENSLLEG00000028600	ENSLLEG00000028668	RUFY1 (ENSLLEG00000028704)	HBEGF (ENSLLEG00000028811) #22	ENSLLEG00000028831	ENSLLEG00000028845	PFDN1 (ENSLLEG00000028867) #23	ENSLLEG00000028909	ENSLLEG00000028916	RAPGEF6 (ENSLLEG00000028983)	ENSLLEG00000029183	ENSLLEG00000014391	ENSLLEG00000014482	TCF7 (ENSLLEG00000014526)	SKP1 (ENSLLEG00000014777)	PPP2CA (ENSLLEG00000014914)	ENSLLEG00000014984	ENSLLEG00000015011	UBE2B (ENSLLEG00000015052)
Coelacanth	MODERN SPECIES	1817													zgc:110540 (ENSLACG00000003686)	ENSLACG00000004394	RUFY1 (ENSLACG00000004882)	HBEGF (ENSLACG00000006051) #22
Actinopterygii	ANCESTRAL SPECIES	112	ENSGT00940000166182	ENSGT00940000161005	ENSGT00950000183015.E	ENSGT00940000158327	ENSGT00940000156413	ENSGT00940000158978	ENSGT00990000206303	ENSGT00390000017909	ENSGT00940000156647	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000160970 #21	ENSGT00940000164917	ENSGT00940000165206	ENSGT00940000158334	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00940000165340
Neopterygii	ANCESTRAL SPECIES	198										ENSGT00390000006721	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206	ENSGT00940000158334	ENSGT00940000156901.A #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000168499	ENSGT00940000166356	ENSGT00530000063652.a.b	ENSGT00390000008582 #30	ENSGT00940000165110	ENSGT00940000153169.A.a ##29	ENSGT00940000154445.b	ENSGT00940000154108.a.d #28	ENSGT00940000157357.e.a	ENSGT00940000159674 #27	ENSGT00940000158778 #26	ENSGT00950000183162.a.a.c
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	215	ENSGT00440000033329.a.a.a	ENSGT00940000165241	ENSGT00940000154444.B	ENSGT00940000158850	ENSGT00500000044831.a.a.b	ENSGT00940000159087	ENSGT01030000234566.e.b.a.b.c.b	ENSGT00390000006721	ENSGT01030000234566.e.b.a.b.d	ENSGT01030000234566.e.b.a.b.c.a	ENSGT00940000165340	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37
Osteoglossiformes	ANCESTRAL SPECIES	116	ENSGT00940000158978.a.b	ENSGT00940000156647.b	ENSGT00390000000537.y	ENSGT00940000158327.k	ENSGT00950000183015.E.a	ENSGT00940000154735.c.h	ENSGT00940000157342.c.b	ENSGT00500000044831.a.a.b.b	ENSGT00940000159087	ENSGT01030000234566.e.b.a.b.c.b	ENSGT00390000006721	ENSGT00940000163328	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206.c.a	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00950000182934.b	ENSGT00940000156944.a.a	ENSGT00940000161609.i.b	ENSGT00940000159345	ENSGT00530000063371.C.a.b
Asian bonytongue	MODERN SPECIES	19	zgc:123105 (ENSSFOG00015022453)	MAPK9 (ENSSFOG00015022465)	ENSSFOG00015022476	ENSSFOG00015022485	rack1 (ENSSFOG00015022501)	hnrnpabb (ENSSFOG00015022519)	gria1b (ENSSFOG00015022558)	cyfip2 (ENSSFOG00015022602)	nipal4 (ENSSFOG00015032691)	ENSSFOG00015022637	TENM2 (ENSSFOG00015022649)	mat2b (ENSSFOG00015022696)	ankhd1 (ENSSFOG00015022717) #20	zgc:110540 (ENSSFOG00015022782)	hnrnph1l (ENSSFOG00015022796)	hbegfb (ENSSFOG00015022807) #22	pfdn1 (ENSSFOG00015027225) #23	slc23a1 (ENSSFOG00015022821) #37	ENSSFOG00015022891	PWWP2A (ENSSFOG00015022869)	ENSSFOG00015029758	ENSSFOG00015022917	timd4 (ENSSFOG00015022926)	ENSSFOG00015022932	ENSSFOG00015022938	fam53c (ENSSFOG00015033270)	ENSSFOG00015022968	zmat2 (ENSSFOG00015022982)	lcp2a (ENSSFOG00015022992)	foxi3a (ENSSFOG00015028060)	grpel2 (ENSSFOG00015030367)
P. kingsleyae	MODERN SPECIES	102	ENSPKIG00000019023	ENSPKIG00000018992	ENSPKIG00000018940	HNRNPAB (ENSPKIG00000018904)	gria1b (ENSPKIG00000018816)	cyfip2 (ENSPKIG00000018664)	nipal4 (ENSPKIG00000018602)	ENSPKIG00000018619	ENSPKIG00000018581	ENSPKIG00000018570	TENM2 (ENSPKIG00000018443)	mat2b (ENSPKIG00000018369)	ankhd1 (ENSPKIG00000018296) #20	zgc:110540 (ENSPKIG00000018245)	hnrnph1l (ENSPKIG00000018203)	hbegfb (ENSPKIG00000018188) #22	pfdn1 (ENSPKIG00000018180) #23	slc23a1 (ENSPKIG00000018130) #37	ccnjl (ENSPKIG00000018099)	PWWP2A (ENSPKIG00000018078)	ENSPKIG00000018041	ADRA1B (ENSPKIG00000018012)	ENSPKIG00000017999	ENSPKIG00000017984	ENSPKIG00000017975	ENSPKIG00000017958	ENSPKIG00000017948	ENSPKIG00000017935	ENSPKIG00000017927	timd4 (ENSPKIG00000017892)	ENSPKIG00000017864
Clupeocephala	ANCESTRAL SPECIES	74							ENSGT01100000263892	ENSGT00940000157342.c.b	ENSGT00940000159087	ENSGT01030000234566.e.b.a.b.c.b.a.b	ENSGT00390000006721	ENSGT00940000163328.d	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000156944.a.a	ENSGT00940000159345	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00940000165075.a.b	ENSGT00940000160001	ENSGT00940000158095	ENSGT00940000165836	ENSGT00940000157061.b	ENSGT00530000063371.C.a	ENSGT00940000159222	ENSGT00940000154735.d.a.a.a.b
Otomorpha	ANCESTRAL SPECIES	181	ENSGT00940000156392.b	ENSGT00940000158735	ENSGT00940000154901.C.b	ENSGT01080000257601	ENSGT00390000006255	ENSGT00390000006979.a	ENSGT00940000164430.a.a	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00950000182934.b	ENSGT00940000156944.a.a	ENSGT00940000159345	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b
Otophysi	ANCESTRAL SPECIES	73	ENSGT01080000257601	ENSGT00390000006255	ENSGT00390000006979.a	ENSGT00940000164430.a.a	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000154108.a.d.f #28	ENSGT00940000154445.b	ENSGT00940000153169.B ##29	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000168499.d	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k
Characiphysae	ANCESTRAL SPECIES	12	ENSGT00940000160483.k.a	ENSGT00950000183148.b.a.g.b	ENSGT00940000154901.C.b	ENSGT01080000257601	ENSGT00390000006255	ENSGT00390000006979.a	ENSGT00940000164430.a.a	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000168499.d	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k
Characiphysae_b	ANCESTRAL SPECIES	6	ENSGT00940000160483.k.a	ENSGT00950000183148.b.a.g.b	ENSGT00940000154901.C.b	ENSGT01080000257601	ENSGT00390000006255	ENSGT00390000006979.a	ENSGT00940000164430.a.a	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000168499.d	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k
Characoidei	ANCESTRAL SPECIES	27	ENSGT00940000160483.k.a	ENSGT00950000183148.b.a.g.b	ENSGT00940000154901.C.b	ENSGT01080000257601	ENSGT00390000006255	ENSGT00390000006979.a	ENSGT00940000164430.a.a	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000168499.d	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k
Red-bellied piranha	MODERN SPECIES	57	RASGRP2 (ENSPNAG00000013105)	pygma (ENSPNAG00000013175)	slc22a6l (ENSPNAG00000013213)	ENSPNAG00000002633	otub1a (ENSPNAG00000002646)	ENSPNAG00000002655	nrg2a (ENSPNAG00000013267) #26	puraa (ENSPNAG00000013278)	zgc:100829 (ENSPNAG00000013316)	CXXC5 (ENSPNAG00000013332) #28	ENSPNAG00000013356 ##29	ppp3ca (ENSPNAG00000013454)	dnajc18 (ENSPNAG00000002764)	ENSPNAG00000002777	hnrnph1l (ENSPNAG00000002784)	hbegfb (ENSPNAG00000002795) #22	pfdn1 (ENSPNAG00000013519) #23	slc23a1 (ENSPNAG00000013556) #37	ENSPNAG00000002822	ccnjl (ENSPNAG00000002826)	fabp6 (ENSPNAG00000013588)	PWWP2A (ENSPNAG00000013605)	ttc1 (ENSPNAG00000013624)	ADRA1B (ENSPNAG00000007173)	ENSPNAG00000013647	havcr1 (ENSPNAG00000002867)	timd4 (ENSPNAG00000013663)	fam53c (ENSPNAG00000002877)	slbp2 (ENSPNAG00000013685)	zmat2 (ENSPNAG00000013716)	lcp2a (ENSPNAG00000002913)
Mexicana tetra	MODERN SPECIES	5	RASGRP2 (ENSAMXG00000020174)	slc22a6l (ENSAMXG00000020208)	cox8a (ENSAMXG00000034171)	otub1a (ENSAMXG00000020226)	ENSAMXG00000029656	nrg2a (ENSAMXG00000020262) #26	puraa (ENSAMXG00000025364)	ENSAMXG00000033549	zgc:100829 (ENSAMXG00000043275)	CXXC5 (ENSAMXG00000005579) #28	ENSAMXG00000029447 ##29	ppp3ca (ENSAMXG00000038129)	dnajc18 (ENSAMXG00000033735)	ENSAMXG00000005696	hnrnph1l (ENSAMXG00000030703)	hbegfb (ENSAMXG00000005722) #22	pfdn1 (ENSAMXG00000042227) #23	ENSAMXG00000031032	slc23a1 (ENSAMXG00000005734) #37	ccnjl (ENSAMXG00000035710)	ENSAMXG00000005739	PWWP2A (ENSAMXG00000037423)	ttc1 (ENSAMXG00000033909)	ADRA1B (ENSAMXG00000036757)	ENSAMXG00000039428	havcr1 (ENSAMXG00000005772)	timd4 (ENSAMXG00000039654)	fam53c (ENSAMXG00000033618)	slbp2 (ENSAMXG00000029210)	zmat2 (ENSAMXG00000042537)	lcp2a (ENSAMXG00000034423)
Electric eel	MODERN SPECIES	428				ENSEEEG00000021657	pygma (ENSEEEG00000021455)	slc22a6l (ENSEEEG00000021393)	otub1a (ENSEEEG00000021380)	ENSEEEG00000021360	nrg2a (ENSEEEG00000021357) #26	puraa (ENSEEEG00000021354)	zgc:100829 (ENSEEEG00000021352)	ppp3ca (ENSEEEG00000021304)	dnajc18 (ENSEEEG00000021293)	ENSEEEG00000021282	hnrnph1l (ENSEEEG00000021278)	hbegfb (ENSEEEG00000021276) #22	pfdn1 (ENSEEEG00000021271) #23	slc23a1 (ENSEEEG00000020718) #37	ccnjl (ENSEEEG00000020693)	fabp6 (ENSEEEG00000020692)	PWWP2A (ENSEEEG00000020690)	ttc1 (ENSEEEG00000020689)	ADRA1B (ENSEEEG00000020688)	ENSEEEG00000020685	havcr1 (ENSEEEG00000020684)
Channel catfish	MODERN SPECIES	9	RASGRP2 (ENSIPUG00000021597)	pygma (ENSIPUG00000021648)	slc22a6l (ENSIPUG00000021676)	rbx1 (ENSIPUG00000021696)	ENSIPUG00000021708	otub1a (ENSIPUG00000021718)	ENSIPUG00000021751	nrg2 (ENSIPUG00000023409) #26	puraa (ENSIPUG00000023429)	zgc:100829 (ENSIPUG00000023435)	cxxc5 (ENSIPUG00000023455) #28	ppp3ca (ENSIPUG00000023459)	ENSIPUG00000023498	DNAJC18 (ENSIPUG00000024039)	hnrnph1l (ENSIPUG00000024047)	hbegf (ENSIPUG00000024054) #22	pfdn1 (ENSIPUG00000024056) #23	slc23a1 (ENSIPUG00000024058) #37	ccnjl (ENSIPUG00000024059)	fabp6 (ENSIPUG00000024061)	PWWP2A (ENSIPUG00000024064)	ttc1 (ENSIPUG00000024065)	adra1b (ENSIPUG00000024067)	ENSIPUG00000024068	ENSIPUG00000024069	havcr1 (ENSIPUG00000024073)	timd4 (ENSIPUG00000024075)	Fam53c (ENSIPUG00000024078)	slbp2 (ENSIPUG00000024079)	Zmat2 (ENSIPUG00000024080)	lcp2a (ENSIPUG00000024195)
Cyprinoidei	ANCESTRAL SPECIES	12	ENSGT00940000156392.b	ENSGT00940000158735	ENSGT00940000163749.a.b	ENSGT00940000154901.C.b	ENSGT00390000006255	ENSGT00390000006979.a	ENSGT00940000164430.a.a	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000168499.d	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b.j	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	469	ENSGT00940000160483.k.a.b	ENSGT00950000183148.b.a.g.b	ENSGT00940000154901.C.b.g	ENSGT00390000006255.c.b	ENSGT00940000154901.C.b.h	ENSGT00390000006255.c.a	ENSGT00390000006979.a.o.a	ENSGT00940000164430.a.a.c	ENSGT00940000158778.c.b #26	ENSGT00950000183162.a.a.c.b	ENSGT00940000157357.e.a.a	ENSGT00940000154108.a.d.e.a #28	ENSGT00940000165110.a.a	ENSGT00940000166356.c	ENSGT00940000165206.c.c	ENSGT00940000156901.A.c.a.a.a #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000156901.A.c.a.a.a #22
Common carp reference	MODERN SPECIES	45	ENSCCRG00000046431	ENSCCRG00000039456	ENSCCRG00000068374	slc22a6l (ENSCCRG00000028957)	cox8a (ENSCCRG00000028969)	otub1a (ENSCCRG00000028976)	ENSCCRG00000058143	nrg2a (ENSCCRG00000070403) #26	ENSCCRG00000067626	ENSCCRG00000057868	puraa (ENSCCRG00000052971)	zgc:100829 (ENSCCRG00000074805)	ppp3ca (ENSCCRG00000045206)	ENSCCRG00000062009	ENSCCRG00000060132	ENSCCRG00000006969 #22	hnrnph1l (ENSCCRG00000055945)	slc23a1 (ENSCCRG00000003873) #37	fabp6 (ENSCCRG00000018782)	PWWP2A (ENSCCRG00000018777)	ttc1 (ENSCCRG00000018772)	ADRA1B (ENSCCRG00000058798)	ENSCCRG00000056602	havcr1 (ENSCCRG00000018757)	timd4 (ENSCCRG00000018741)	fam53c (ENSCCRG00000018736)	slbp2 (ENSCCRG00000018734)	zmat2 (ENSCCRG00000008403)	lcp2a (ENSCCRG00000051798)	afap1l1b (ENSCCRG00000059411)	rab39ba (ENSCCRG00000068602)
Goldfish	MODERN SPECIES	13	zgc:165604 (ENSCARG00000021236)	PCNX3 (ENSCARG00000021087)	NRXN2 (ENSCARG00000018498)	RASGRP2 (ENSCARG00000018343)	slc22a6l (ENSCARG00000018325)	cox8a (ENSCARG00000018321)	otub1a (ENSCARG00000018294)	ENSCARG00000018288	nrg2a (ENSCARG00000018092) #26	puraa (ENSCARG00000018075)	zgc:100829 (ENSCARG00000018062)	CXXC5 (ENSCARG00000018057) #28	ppp3ca (ENSCARG00000015380)	dnajc18 (ENSCARG00000015276)	hnrnph1l (ENSCARG00000015261)	hbegfb (ENSCARG00000015251) #22	pfdn1 (ENSCARG00000015242) #23	slc23a1 (ENSCARG00000014471) #37	ccnjl (ENSCARG00000014427)	fabp6 (ENSCARG00000014416)	PWWP2A (ENSCARG00000014398)	ttc1 (ENSCARG00000014391)	ADRA1B (ENSCARG00000014387)	ENSCARG00000014376	havcr1 (ENSCARG00000014365)	timd4 (ENSCARG00000014363)	fam53c (ENSCARG00000014357)	slbp2 (ENSCARG00000014346)	zmat2 (ENSCARG00000014302)	lcp2a (ENSCARG00000014266)	foxi3a (ENSCARG00000014252)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000156901.A.c.a.a.b #22
Goldfish	MODERN SPECIES	2333	ENSCARG00000040727	ENSCARG00000040740	spag7 (ENSCARG00000040756)	slc25a11 (ENSCARG00000040775)	KCNAB3 (ENSCARG00000041045)	ENSCARG00000041140	ENSCARG00000041161	tnfsf13 (ENSCARG00000041372)	h1m (ENSCARG00000041428)	ephb4a (ENSCARG00000041529)	DLG4 (ENSCARG00000042958)	mepcea (ENSCARG00000043507)	her1 (ENSCARG00000043526)	ENSCARG00000043537	her7 (ENSCARG00000043550)	hbegfb (ENSCARG00000043557) #22	ganaba (ENSCARG00000043662)	ENSCARG00000045583	ENSCARG00000045602	ENSCARG00000045623	ank1a (ENSCARG00000046251)	spaw (ENSCARG00000054732)	ENSCARG00000054741	usp39 (ENSCARG00000054800)	si:ch211-283h6.4 (ENSCARG00000055480)	mat2ab (ENSCARG00000055539)	selenom (ENSCARG00000056404)	ENSCARG00000056422	CCNO (ENSCARG00000056487)	isca1 (ENSCARG00000056497)	ENSCARG00000056528
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000156901.A.c.a.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000156901.A.c.a.b #22
Golden-line barbel	MODERN SPECIES	123															BRD8 (ENSSGRG00000001274)	hbegfb (ENSSGRG00000001640) #22	pfdn1 (ENSSGRG00000001644) #23	slc23a1 (ENSSGRG00000001677) #37	ccnjl (ENSSGRG00000001682)	fabp6 (ENSSGRG00000001684)	PWWP2A (ENSSGRG00000001687)	ttc1 (ENSSGRG00000001689)	ADRA1B (ENSSGRG00000001692)	ENSSGRG00000001696	havcr1 (ENSSGRG00000001697)	timd4 (ENSSGRG00000001700)	fam53c (ENSSGRG00000001703)	zmat2 (ENSSGRG00000001705)	lcp2a (ENSSGRG00000001739)	foxi3a (ENSSGRG00000001740)	nhp2 (ENSSGRG00000001745)
Cyprininae	ANCESTRAL SPECIES	80						ENSGT00390000006979.a.o.b	ENSGT00940000164430.a.a.d	ENSGT00940000158778.c.a #26	ENSGT00950000183162.a.a.c.a	ENSGT00940000157357.e.a.b	ENSGT00940000154108.a.d.e.b #28	ENSGT00940000165110.a.b	ENSGT00940000166356.d	ENSGT00530000064262.pc.a	ENSGT00940000165206.c.d	ENSGT00940000156901.A.c.b #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d.d #37	ENSGT00940000159349.g	ENSGT00940000157139.b.h.a	ENSGT00940000157692.p	ENSGT00940000157213.p	ENSGT00940000156944.a.a.j	ENSGT00940000159345	ENSGT00940000163509.a.a.a.e	ENSGT00940000163509.b.j.b	ENSGT00530000063371.C.a.h	ENSGT00940000164705.h	ENSGT00390000010712.u	ENSGT00940000156835.k.a.a	ENSGT00940000164576.b.a.b.a
Cyprininae_a	ANCESTRAL SPECIES	112						ENSGT00390000006979.a.o.b	ENSGT00940000164430.a.a.d	ENSGT00940000158778.c.a #26	ENSGT00950000183162.a.a.c.a	ENSGT00940000157357.e.a.b	ENSGT00940000154108.a.d.e.b #28	ENSGT00940000165110.a.b	ENSGT00940000166356.d	ENSGT00530000064262.pc.a	ENSGT00940000165206.c.d	ENSGT00940000156901.A.c.b #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d.d #37	ENSGT00940000159349.g	ENSGT00940000157139.b.g	ENSGT00940000157139.b.h.a	ENSGT00940000157692.p	ENSGT00940000157213.p	ENSGT00940000156944.a.a.j	ENSGT00940000154444.A	ENSGT00940000163509.a.a.a.e	ENSGT00940000163509.b.j.b	ENSGT00530000063371.C.a.h	ENSGT00940000164705.h	ENSGT00390000010712.u	ENSGT00940000156835.k.a.a
Golden-line barbel	MODERN SPECIES	587		ENSSGRG00000005785	ENSSGRG00000006120	RASGRP2 (ENSSGRG00000006123)	pygma (ENSSGRG00000006358)	slc22a6l (ENSSGRG00000014056)	cox8a (ENSSGRG00000014059)	otub1a (ENSSGRG00000014060)	ENSSGRG00000014061	nrg2a (ENSSGRG00000014068) #26	puraa (ENSSGRG00000014195)	zgc:100829 (ENSSGRG00000014196)	CXXC5 (ENSSGRG00000014197) #28	ppp3ca (ENSSGRG00000014198)	hnrnph1l (ENSSGRG00000014464)	hbegfb (ENSSGRG00000014466) #22	slc23a1 (ENSSGRG00000014467) #37	ccnjl (ENSSGRG00000014468)	fabp6 (ENSSGRG00000014469)	PWWP2A (ENSSGRG00000014470)	ttc1 (ENSSGRG00000014471)	ADRA1B (ENSSGRG00000014472)	ENSSGRG00000014473	havcr1 (ENSSGRG00000014474)	timd4 (ENSSGRG00000014475)	ENSSGRG00000014476	fam53c (ENSSGRG00000014477)	slbp2 (ENSSGRG00000014478)	zmat2 (ENSSGRG00000014479)	nhp2 (ENSSGRG00000014483)	grpel2 (ENSSGRG00000014484)
Common carp reference	MODERN SPECIES	38	pacs1a (ENSCCRG00000080072)	ENSCCRG00000042237	ENSCCRG00000061299	ENSCCRG00000055308	pygma (ENSCCRG00000046978)	slc22a6l (ENSCCRG00000014998)	otub1a (ENSCCRG00000014902)	ENSCCRG00000014878	nrg2a (ENSCCRG00000060948) #26	puraa (ENSCCRG00000069137)	zgc:100829 (ENSCCRG00000045032)	ppp3ca (ENSCCRG00000062027)	dnajc18 (ENSCCRG00000003827)	ENSCCRG00000003384	hnrnph1l (ENSCCRG00000003317)	hbegfb (ENSCCRG00000063068) #22	pfdn1 (ENSCCRG00000018839) #23	slc23a1 (ENSCCRG00000018803) #37	ccnjl (ENSCCRG00000078212)	fabp6 (ENSCCRG00000063317)	PWWP2A (ENSCCRG00000062860)	ttc1 (ENSCCRG00000020742)	ADRA1B (ENSCCRG00000052745)	ENSCCRG00000052747	havcr1 (ENSCCRG00000055448)	timd4 (ENSCCRG00000035649)	fam53c (ENSCCRG00000076480)	zmat2 (ENSCCRG00000052753)	lcp2a (ENSCCRG00000052759)	ENSCCRG00000052751	foxi3a (ENSCCRG00000051793)
Goldfish	MODERN SPECIES	40	RASGRP2 (ENSCARG00000067249)	pygma (ENSCARG00000065756)	slc22a6l (ENSCARG00000065590)	cox8a (ENSCARG00000065582)	otub1a (ENSCARG00000065553)	ENSCARG00000065549	puraa (ENSCARG00000065545)	nrg2a (ENSCARG00000065411) #26	zgc:100829 (ENSCARG00000065395)	CXXC5 (ENSCARG00000065388) #28	ENSCARG00000065381	ppp3ca (ENSCARG00000064795)	dnajc18 (ENSCARG00000064699)	BRD8 (ENSCARG00000064129)	hnrnph1l (ENSCARG00000064002)	hbegfb (ENSCARG00000063991) #22	pfdn1 (ENSCARG00000063974) #23	ccnjl (ENSCARG00000063960)	fabp6 (ENSCARG00000063945)	PWWP2A (ENSCARG00000063921)	ttc1 (ENSCARG00000063905)	ADRA1B (ENSCARG00000063895)	ENSCARG00000063887	havcr1 (ENSCARG00000063876)	ENSCARG00000063867	fam53c (ENSCARG00000063859)	slbp2 (ENSCARG00000063806)	zmat2 (ENSCARG00000063774)	lcp2a (ENSCARG00000063699)	foxi3a (ENSCARG00000063682)	nhp2 (ENSCARG00000063661)
Zebrafish	MODERN SPECIES	13	rab39ba (ENSDARG00000019312)	slc7a3a (ENSDARG00000020645)	snx12 (ENSDARG00000019060)	afap1l1b (ENSDARG00000056453)	grpel2 (ENSDARG00000069421)	nhp2 (ENSDARG00000069422)	ENSDARG00000116832	foxi3a (ENSDARG00000055926)	lcp2a (ENSDARG00000055955)	zmat2 (ENSDARG00000004956)	slbp2 (ENSDARG00000069428)	fam53c (ENSDARG00000045127)	dnajc18 (ENSDARG00000056005)	BRD8 (ENSDARG00000055999)	hnrnph1l (ENSDARG00000005551)	hbegfb (ENSDARG00000031246) #22	pfdn1 (ENSDARG00000014536) #23	slc23a1 (ENSDARG00000015033) #37	ENSDARG00000086705	ccnjl (ENSDARG00000077116)	fabp6 (ENSDARG00000044566)	ENSDARG00000114922	PWWP2A (ENSDARG00000075526)	ttc1 (ENSDARG00000044567)	zgc:171310 (ENSDARG00000097564)	ENSDARG00000109332	ENSDARG00000099580	ENSDARG00000110355	ENSDARG00000069362	ENSDARG00000112176	ENSDARG00000109968
Clupeiformes	ANCESTRAL SPECIES	115	ENSGT00950000183148.b.a.g.b	ENSGT00940000154901.C.b	ENSGT01080000257601	ENSGT00940000158778.c #26	ENSGT00950000183162.a.a.c	ENSGT00940000157357.e.a	ENSGT00940000154108.a.d.e #28	ENSGT00940000154108.a.c #28	ENSGT00940000154445.b	ENSGT00940000153169.B ##29	ENSGT00940000165110.b	ENSGT00940000165110.a	ENSGT00940000166356	ENSGT00530000064262.pc.a	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000159349	ENSGT00940000156944.a.b	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00950000182934.b	ENSGT00940000156944.a.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712
Denticle herring	MODERN SPECIES	16	RASGRP2 (ENSDCDG00000025752)	pygma (ENSDCDG00000025810)	slc22a6l (ENSDCDG00000027508)	ENSDCDG00000027519	otub1a (ENSDCDG00000027523)	ENSDCDG00000027589	nrg2a (ENSDCDG00000027596) #26	puraa (ENSDCDG00000027654)	zgc:100829 (ENSDCDG00000027656)	CXXC5 (ENSDCDG00000027660) #28	ube2d2 (ENSDCDG00000027667) ##29	ppp3ca (ENSDCDG00000027958)	dnajc18 (ENSDCDG00000032112)	BRD8 (ENSDCDG00000032122)	hnrnph1l (ENSDCDG00000032137)	hbegfb (ENSDCDG00000032141) #22	pfdn1 (ENSDCDG00000032144) #23	slc23a1 (ENSDCDG00000032178) #37	ccnjl (ENSDCDG00000032646)	fabp6 (ENSDCDG00000032653)	ENSDCDG00000032656	ttc1 (ENSDCDG00000032661)	ENSDCDG00000032665	ADRA1B (ENSDCDG00000032667)	ENSDCDG00000032668	ENSDCDG00000032669	timd4 (ENSDCDG00000032670)	ENSDCDG00000032671	ENSDCDG00000032678	fam53c (ENSDCDG00000032849)	slbp2 (ENSDCDG00000032851)
Atlantic herring	MODERN SPECIES	24	trim3b (ENSCHAG00000016622)	trim47 (ENSCHAG00000016599)	rbm41 (ENSCHAG00000016591)	neu3.1 (ENSCHAG00000016580)	MCF2 (ENSCHAG00000016562)	f9b (ENSCHAG00000016496)	fgf13b (ENSCHAG00000016452)	tmtops3b (ENSCHAG00000016296)	ENSCHAG00000016271	htatsf1 (ENSCHAG00000016240)	ENSCHAG00000016221	ENSCHAG00000016137	fhl1b (ENSCHAG00000016125)	slc9a6b (ENSCHAG00000015324)	hnrnph1l (ENSCHAG00000015173)	ENSCHAG00000015132 #22	pfdn1 (ENSCHAG00000015113) #23	slc23a1 (ENSCHAG00000012939) #37	fabp6 (ENSCHAG00000012886)	PWWP2A (ENSCHAG00000012878)	ttc1 (ENSCHAG00000012861)	ADRA1B (ENSCHAG00000012797)	havcr1 (ENSCHAG00000012784)	timd4 (ENSCHAG00000012771)	ENSCHAG00000012401	fam53c (ENSCHAG00000012371)	foxi3a (ENSCHAG00000012354)	grpel2 (ENSCHAG00000012344)	afap1l1b (ENSCHAG00000012303)	ablim3 (ENSCHAG00000010763)	adrb2b (ENSCHAG00000010726)
Euteleosteomorpha	ANCESTRAL SPECIES	297						ENSGT01100000263892	ENSGT00940000157342.c.b	ENSGT00940000159087	ENSGT00940000164327.a	ENSGT01030000234566.e.b.a.b.c.b.b	ENSGT00390000006721	ENSGT00940000163328.d	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37
Protacanthopterygii	ANCESTRAL SPECIES	105	ENSGT00940000160156	ENSGT00940000156179	ENSGT00940000155228	ENSGT00390000005976.a.a.a	ENSGT01100000263892	ENSGT00940000157342.c.b	ENSGT00940000159087	ENSGT00940000164327.a.a	ENSGT00940000164327.a.b	ENSGT01030000234566.e.b.a.b.c.b.b	ENSGT00390000006721	ENSGT00940000163328.d	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206.c	ENSGT00940000156901.A.c #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d #37	ENSGT00940000159349.e.b	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00940000159345
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	39										ENSGT01030000234566.e.b.a.b.c.b.b.a.a.b	ENSGT00390000006721	ENSGT00940000163328.d.d	ENSGT00940000153768.b.t.b.b #20	ENSGT00940000164917	ENSGT00940000165206.c.e	ENSGT00940000156901.A.c.c #22	ENSGT00950000182953.C.d.e #37	ENSGT00940000159349.e.b.a	ENSGT00940000157139.b.f	ENSGT00940000157692.t	ENSGT00940000157213.n	ENSGT00940000156944.a.a.g	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00940000156179.c	ENSGT00940000155228.f	ENSGT00390000005976.a.a.a	ENSGT00940000154735.c.f	ENSGT01100000263892.b.b	ENSGT00980000198599.a	ENSGT00940000157342.c.b.c	ENSGT00940000159087.y.a	ENSGT00940000164327.a.a	ENSGT01030000234566.e.b.a.b.c.b.b.a.b	ENSGT00390000006721	ENSGT00940000163328.d.d	ENSGT00940000153768.b.t.b.b #20	ENSGT00940000164917	ENSGT00940000165206.c.e	ENSGT00940000156901.A.c.c #22	ENSGT00950000182953.C.d.e #37	ENSGT00940000159349.e.b.a	ENSGT00940000157139.b.f	ENSGT00940000157692.t	ENSGT00940000157213.n	ENSGT00940000156944.a.a.g	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b
Salmo	ANCESTRAL SPECIES	17	ENSGT00940000160156	ENSGT00940000156179.c	ENSGT00940000155228.f	ENSGT00390000005976.a.a.a	ENSGT00940000154735.c.f	ENSGT01100000263892.b.b	ENSGT00940000157342.c.b.c	ENSGT00940000159087.y.a	ENSGT00940000164327.a.a	ENSGT01030000234566.e.b.a.b.c.b.b.a.a.b	ENSGT00390000006721	ENSGT00940000163328.d.d	ENSGT00940000153768.b.t.b.b #20	ENSGT00940000164917	ENSGT00940000165206.c.e	ENSGT00940000156901.A.c.c #22	ENSGT00390000009786.b #23	ENSGT00950000182953.C.d.e #37	ENSGT00940000159349.e.b.a	ENSGT00940000157139.b.f	ENSGT00940000157692.t	ENSGT00940000157213.n	ENSGT00940000156944.a.a.g	ENSGT00940000161609	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f
Atlantic salmon	MODERN SPECIES	23	ube2g1a (ENSSSAG00000015419)	spns3 (ENSSSAG00000015207)	ROAA (ENSSSAG00000015001)	ENSSSAG00000014948	ENSSSAG00000113766	ENSSSAG00000007371	ENSSSAG00000007233	ENSSSAG00000007215	ENSSSAG00000106531	tenm2 (ENSSSAG00000007015)	mat2b (ENSSSAG00000006967)	eif4ebp3 (ENSSSAG00000006947)	ANKHD1 (ENSSSAG00000001574) #20	zgc:110540 (ENSSSAG00000118797)	hnrnph1l (ENSSSAG00000067747)	hbegfb (ENSSSAG00000001204) #22	pfdn1 (ENSSSAG00000001121) #23	slc23a1 (ENSSSAG00000000807) #37	ccnjl (ENSSSAG00000000589)	fabp6 (ENSSSAG00000000580)	PWWP2A (ENSSSAG00000000570)	ttc1 (ENSSSAG00000000553)	ADRA1B (ENSSSAG00000080175)	ENSSSAG00000080174	havcr1 (ENSSSAG00000080172)	timd4 (ENSSSAG00000087400)	ENSSSAG00000080169	ENSSSAG00000080159	ENSSSAG00000089832	fam53c (ENSSSAG00000079951)	slbp2 (ENSSSAG00000079947)
River trout	MODERN SPECIES	10	spns3 (ENSSTUG00000026658)	HNRNPAB (ENSSTUG00000026787)	ENSSTUG00000026801	ENSSTUG00000026805	ENSSTUG00000026810	ENSSTUG00000026816	gria1b (ENSSTUG00000026827)	nipal4 (ENSSTUG00000027020)	ins (ENSSTUG00000027048)	TENM2 (ENSSTUG00000027226)	mat2b (ENSSTUG00000032442)	eif4ebp3 (ENSSTUG00000032496)	ankhd1 (ENSSTUG00000032570) #20	zgc:110540 (ENSSTUG00000033729)	hnrnph1l (ENSSTUG00000033761)	hbegfb (ENSSTUG00000033849) #22	pfdn1 (ENSSTUG00000033869) #23	slc23a1 (ENSSTUG00000033977) #37	ccnjl (ENSSTUG00000036169)	fabp6 (ENSSTUG00000036172)	PWWP2A (ENSSTUG00000036185)	ENSSTUG00000036188	ttc1 (ENSSTUG00000036193)	ADRA1B (ENSSTUG00000036211)	ENSSTUG00000036228	timd4 (ENSSTUG00000036245)	ENSSTUG00000036253	ENSSTUG00000036268	ENSSTUG00000036388	fam53c (ENSSTUG00000036624)	slbp2 (ENSSTUG00000002198)
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00940000160156	ENSGT00940000156179.c	ENSGT00940000155228.f	ENSGT00390000005976.a.a.a	ENSGT00940000154735.c.f	ENSGT01100000263892.b.b	ENSGT00940000157342.c.b.c	ENSGT00940000159087.y.a	ENSGT00940000164327.a.a	ENSGT01030000234566.e.b.a.b.c.b.b.a.b	ENSGT00390000006721.t	ENSGT00940000163328.d.d	ENSGT00940000153768.b.t.b.b #20	ENSGT00940000164917	ENSGT00940000165206.c.e	ENSGT00940000156901.A.c.c #22	ENSGT00950000182953.C.d.e #37	ENSGT00940000159349.e.b.a	ENSGT00940000157139.b.f	ENSGT00940000157692.t	ENSGT00940000157213.n	ENSGT00940000156944.a.a.g	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00990000211609.b.b	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00940000155668.j.c.a	ENSGT00940000160156	ENSGT00940000156179.c	ENSGT00940000155228.f	ENSGT00390000005976.a.a.a	ENSGT00940000154735.c.f	ENSGT00940000157342.c.b.c	ENSGT00940000159087.y.a	ENSGT00940000164327.a.a	ENSGT01030000234566.e.b.a.b.c.b.b.a.b	ENSGT00390000006721.t	ENSGT00940000163328.d.d	ENSGT00940000153768.b.t.b.b #20	ENSGT00940000164917	ENSGT00940000165206.c.e	ENSGT00940000156901.A.c.c #22	ENSGT00950000182953.C.d.e #37	ENSGT00940000159349.e.b.a	ENSGT00940000157139.b.f	ENSGT00940000157692.t	ENSGT00940000157213.n	ENSGT00940000156944.a.a.g	ENSGT00940000163509.a.a.a.q.a	ENSGT00940000163509.b.g	ENSGT00940000165075.a.b.a.a	ENSGT00990000211609.b.b	ENSGT00940000168356	ENSGT00940000157061.b.k.b.a	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712
Chinook salmon	MODERN SPECIES	23	YWHAG (ENSOTSG00005014773)	ENSOTSG00005014774	slc22a21 (ENSOTSG00005014778)	ENSOTSG00005014779	slc22a4 (ENSOTSG00005014781)	irf1b (ENSOTSG00005014793)	ENSOTSG00005014821	fnip1 (ENSOTSG00005032634)	TENM2 (ENSOTSG00005035455)	mat2b (ENSOTSG00005035459)	eif4ebp3 (ENSOTSG00005035463)	ankhd1 (ENSOTSG00005035483) #20	ENSOTSG00005039618	zgc:110540 (ENSOTSG00005039619)	hnrnph1l (ENSOTSG00005039622)	hbegfb (ENSOTSG00005039688) #22	slc23a1 (ENSOTSG00005039689) #37	ccnjl (ENSOTSG00005039691)	fabp6 (ENSOTSG00005039692)	PWWP2A (ENSOTSG00005039693)	ENSOTSG00005039694	ADRA1B (ENSOTSG00005039695)	havcr1 (ENSOTSG00005039698)	timd4 (ENSOTSG00005039699)	ENSOTSG00005039704	ENSOTSG00005002717	fam53c (ENSOTSG00005002874)	slbp2 (ENSOTSG00005002884)	zmat2 (ENSOTSG00005002892)	ENSOTSG00005002896	foxi3a (ENSOTSG00005002913)
Coho salmon	MODERN SPECIES	20	cyb5d2 (ENSOKIG00005028140)	ankfy1 (ENSOKIG00005027816)	ube2g1a (ENSOKIG00005027766)	spns3 (ENSOKIG00005027568)	HNRNPAB (ENSOKIG00005027535)	GRIA1 (ENSOKIG00005027322)	ENSOKIG00005027298	nipal4 (ENSOKIG00005027289)	ins (ENSOKIG00005027224)	TENM2 (ENSOKIG00005026723)	mat2b (ENSOKIG00005026655)	eif4ebp3 (ENSOKIG00005026642)	ankhd1 (ENSOKIG00005025134) #20	zgc:110540 (ENSOKIG00005025035)	hnrnph1l (ENSOKIG00005024830)	hbegfb (ENSOKIG00005024792) #22	ENSOKIG00005024779	ENSOKIG00005038614	slc23a1 (ENSOKIG00005038253) #37	ccnjl (ENSOKIG00005038204)	PWWP2A (ENSOKIG00005038190)	ttc1 (ENSOKIG00005038148)	ADRA1B (ENSOKIG00005038137)	havcr1 (ENSOKIG00005038122)	timd4 (ENSOKIG00005038103)	ENSOKIG00005038074	ENSOKIG00005038054	ENSOKIG00005037894	ENSOKIG00005037784	fam53c (ENSOKIG00005037756)	slbp2 (ENSOKIG00005037748)
Rainbow trout	MODERN SPECIES	1	cyb5d2 (ENSOMYG00000012681)	ankfy1 (ENSOMYG00000012793)	ube2g1a (ENSOMYG00000053230)	spns3 (ENSOMYG00000013651)	ENSOMYG00000014107	ENSOMYG00000014155	ENSOMYG00000014379	ENSOMYG00000017589	ENSOMYG00000017615	ENSOMYG00000070301	ENSOMYG00000047286	eif4ebp3 (ENSOMYG00000047289)	ENSOMYG00000047375 #20	zgc:110540 (ENSOMYG00000047466)	hnrnph1l (ENSOMYG00000047478)	hbegf (ENSOMYG00000050156) #22	slc23a1 (ENSOMYG00000047512) #37	ccnjl (ENSOMYG00000047524)	fabp6 (ENSOMYG00000047527)	PWWP2A (ENSOMYG00000047531)	ttc1 (ENSOMYG00000047533)	ADRA1B (ENSOMYG00000047535)	havcr1 (ENSOMYG00000017947)	timd4 (ENSOMYG00000017954)	ENSOMYG00000017961	ENSOMYG00000049711	ENSOMYG00000056702	ENSOMYG00000017991	ENSOMYG00000018078	ENSOMYG00000018199	zmat2 (ENSOMYG00000018246)
Salmoninae	ANCESTRAL SPECIES	277	ENSGT00940000155668.j.c.b	ENSGT00940000155045	ENSGT00940000156179.d	ENSGT00940000155228.e	ENSGT00940000154735.c.e	ENSGT01100000263892	ENSGT00940000157342.c.b.d	ENSGT00940000159087.z	ENSGT00940000159087.y.b	ENSGT00940000164327.a.b	ENSGT01030000234566.e.b.a.b.c.b.b.b	ENSGT00940000165340.l	ENSGT00940000163328.d.c	ENSGT00940000153768.b.t.b.a #20	ENSGT00940000165206.c.f	ENSGT00940000156901.A.c.d #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d.f #37	ENSGT00940000159349.e.b.b	ENSGT00940000157139.b.e	ENSGT00940000157692.s	ENSGT00940000157213.m	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00940000155045	ENSGT00990000212862	ENSGT00940000156179.d	ENSGT00940000155228.e	ENSGT00940000154735.c.e	ENSGT01100000263892.b.a	ENSGT00940000157342.c.b.d	ENSGT00940000159087.z	ENSGT00940000159087.y.b	ENSGT00940000164327.a.b	ENSGT01030000234566.e.b.a.b.c.b.b.b	ENSGT00940000165340.l	ENSGT00940000163328.d.c	ENSGT00940000153768.b.t.b.a #20	ENSGT00940000165206.c.f	ENSGT00940000156901.A.c.d #22	ENSGT00390000009786 #23	ENSGT00950000182953.C.d.f #37	ENSGT00940000159349.e.b.b	ENSGT00940000157139.b.e	ENSGT00940000157692.s	ENSGT00940000157213.m	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a
Salmo	ANCESTRAL SPECIES	44	ENSGT00940000155668.j.c.b	ENSGT00940000155045	ENSGT00990000212862	ENSGT00940000156179.d	ENSGT00940000155228.e	ENSGT00940000154735.c.e	ENSGT01100000263892.b.a	ENSGT00940000157342.c.b.d	ENSGT00940000159087.z	ENSGT00940000164327.a.b	ENSGT01030000234566.e.b.a.b.c.b.b.b	ENSGT00940000165340.l	ENSGT00940000163328.d.c	ENSGT00940000153768.b.t.b.a #20	ENSGT00940000165206.c.f	ENSGT00940000156901.A.c.d #22	ENSGT00390000009786.a #23	ENSGT00950000182953.C.d.f #37	ENSGT00940000159349.e.b.b	ENSGT00940000157139.b.e	ENSGT00940000157692.s	ENSGT00940000157213.m	ENSGT00940000156944.a.a.h	ENSGT00940000159345	ENSGT00940000163509.a.a.a.q.b	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a
River trout	MODERN SPECIES	6	ENSSTUG00000017545	ZZEF1 (ENSSTUG00000017555)	ENSSTUG00000017628	ankfy1 (ENSSTUG00000017652)	ube2g1a (ENSSTUG00000017825)	hnrnpabb (ENSSTUG00000017846)	ENSSTUG00000001837	gria1b (ENSSTUG00000002642)	ENSSTUG00000003297	ins (ENSSTUG00000003301)	TENM2 (ENSSTUG00000003435)	zgc:165573 (ENSSTUG00000005902)	eif4ebp3 (ENSSTUG00000005910)	ankhd1 (ENSSTUG00000006018) #20	hnrnph1l (ENSSTUG00000010471)	hbegfb (ENSSTUG00000010513) #22	pfdn1 (ENSSTUG00000010526) #23	slc23a1 (ENSSTUG00000010556) #37	ccnjl (ENSSTUG00000011006)	fabp6 (ENSSTUG00000011013)	PWWP2A (ENSSTUG00000011017)	ttc1 (ENSSTUG00000011019)	ADRA1B (ENSSTUG00000011029)	ENSSTUG00000011032	havcr1 (ENSSTUG00000011041)	timd4 (ENSSTUG00000011064)	ENSSTUG00000011068	ENSSTUG00000011077	ENSSTUG00000011088	fam53c (ENSSTUG00000011224)	slbp2 (ENSSTUG00000011232)
Atlantic salmon	MODERN SPECIES	4	ZZEF1 (ENSSSAG00000041149)	ENSSSAG00000042927	ENSSSAG00000086033	ankfy1 (ENSSSAG00000042993)	ube2g1a (ENSSSAG00000043662)	ROAA (ENSSSAG00000043692)	ENSSSAG00000043937	ENSSSAG00000054872	ENSSSAG00000054876	ENSSSAG00000055248	ENSSSAG00000064527	EIF4EBP3 (ENSSSAG00000064534)	ANKHD1 (ENSSSAG00000064659) #20	ENSSSAG00000096366	hnrnph1l (ENSSSAG00000001128)	hbegfb (ENSSSAG00000067774) #22	pfdn1 (ENSSSAG00000067783) #23	slc23a1 (ENSSSAG00000067832) #37	ccnjl (ENSSSAG00000069342)	ENSSSAG00000099025	fabp6 (ENSSSAG00000069353)	pwwp2a (ENSSSAG00000087301)	ttc1 (ENSSSAG00000069365)	ADRA1B (ENSSSAG00000069371)	ENSSSAG00000069377	havcr1 (ENSSSAG00000069384)	havcr1 (ENSSSAG00000120312)	timd4 (ENSSSAG00000116308)	ENSSSAG00000069406	ctbp2 (ENSSSAG00000069412)	fam53c (ENSSSAG00000095597)
Huchen	MODERN SPECIES	259				ankfy1 (ENSHHUG00000044117)	ube2g1a (ENSHHUG00000044105)	hnrnpabb (ENSHHUG00000044101)	ENSHHUG00000044099	gria1b (ENSHHUG00000044093)	ENSHHUG00000044081	ins (ENSHHUG00000044048)	TENM2 (ENSHHUG00000043327)	zgc:165573 (ENSHHUG00000043301)	eif4ebp3 (ENSHHUG00000043297)	ankhd1 (ENSHHUG00000042819) #20	hnrnph1l (ENSHHUG00000042780)	HBEGF (ENSHHUG00000042769) #22	pfdn1 (ENSHHUG00000042761) #23	slc23a1 (ENSHHUG00000042674) #37	ccnjl (ENSHHUG00000042667)	fabp6 (ENSHHUG00000042650)	PWWP2A (ENSHHUG00000042644)	ttc1 (ENSHHUG00000042628)	ADRA1B (ENSHHUG00000042625)
Northern pike	MODERN SPECIES	6	ube2g1a (ENSELUG00000030437)	spns3 (ENSELUG00000020735)	hnrnpabb (ENSELUG00000020765)	ENSELUG00000020777	ENSELUG00000020810	gria1b (ENSELUG00000020875)	nipal4 (ENSELUG00000000917)	ins (ENSELUG00000031968)	TENM2 (ENSELUG00000021149)	zgc:165573 (ENSELUG00000021171)	mat2b (ENSELUG00000021204)	eif4ebp3 (ENSELUG00000021245)	ankhd1 (ENSELUG00000021397) #20	hnrnph1l (ENSELUG00000021437)	zgc:110540 (ENSELUG00000021430)	hbegfb (ENSELUG00000021458) #22	pfdn1 (ENSELUG00000021482) #23	slc23a1 (ENSELUG00000021516) #37	ccnjl (ENSELUG00000021527)	ttc1 (ENSELUG00000021587)	PWWP2A (ENSELUG00000021571)	ADRA1B (ENSELUG00000021602)	ENSELUG00000021615	havcr1 (ENSELUG00000021632)	havcr1 (ENSELUG00000021665)	havcr1 (ENSELUG00000032372)	timd4 (ENSELUG00000021681)	ENSELUG00000028611	ENSELUG00000021690	ENSELUG00000021723	fam53c (ENSELUG00000021751)
Osteoglossocephalai	ANCESTRAL SPECIES	77												ENSGT00390000007135	ENSGT00940000164327	ENSGT00940000153503	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000159349	ENSGT00950000185681	ENSGT00940000157139	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.a	ENSGT00950000182934.b	ENSGT00940000156944.a.b	ENSGT00940000163509.a.a.b	ENSGT00940000161609	ENSGT00940000159345	ENSGT00940000163509.a.a.a
Clupeocephala	ANCESTRAL SPECIES	11	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a	ENSGT00440000033329.a.a.a	ENSGT00940000165241	ENSGT00940000154444.B	ENSGT00940000158850	ENSGT00500000044831.a.a.b	ENSGT00390000007135	ENSGT00940000164327.b	ENSGT01030000234566.e.b.a.b.c.a	ENSGT00940000165340	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000159349	ENSGT00940000157139.b	ENSGT00940000157692	ENSGT00940000157213	ENSGT00950000182934.b	ENSGT00940000156944.a.b	ENSGT00940000161609	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000161176	ENSGT00940000156835.l.b
Otomorpha	ANCESTRAL SPECIES	365			ENSGT01100000263892	ENSGT00940000157342.c.b	ENSGT00940000159087	ENSGT01030000234566.e.b.a.b.c.b.a.b	ENSGT00390000006721	ENSGT01030000234566.e.b.a.b.c.b.b	ENSGT00940000165340	ENSGT00940000163328.c	ENSGT00940000163328.d	ENSGT00940000153768.b #20	ENSGT00940000164917	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00390000002292.b	ENSGT00940000159591
Otophysi	ANCESTRAL SPECIES	10											ENSGT00940000159595	ENSGT00940000154735.d.b	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499.c	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000155249.h	ENSGT00940000154953.a	ENSGT00440000037338	ENSGT00960000187553	ENSGT00950000183174.B.a.f	ENSGT00390000002932	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.gb	ENSGT00940000156526.b
Characiphysae	ANCESTRAL SPECIES	21											ENSGT00940000159595	ENSGT00940000154735.d.b	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499.c	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000155249.h	ENSGT00940000154953.a	ENSGT00440000037338	ENSGT00960000187553	ENSGT00950000183174.B.a.f	ENSGT00390000002932	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.gb	ENSGT00940000156526.b
Characiphysae_b	ANCESTRAL SPECIES	16	ENSGT00940000156944.a.b	ENSGT01030000234904	ENSGT00940000158277.b.a.b	ENSGT00940000156295.h	ENSGT00940000177650	ENSGT00940000166427	ENSGT00940000156736.d	ENSGT00940000155353.b	ENSGT00940000156892.a	ENSGT00940000158417.a	ENSGT00940000159595	ENSGT00940000154735.d.b	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499.c	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000155249.h	ENSGT00940000154953.a	ENSGT00440000037338	ENSGT00960000187553	ENSGT00950000183174.B.a.f	ENSGT00390000002932	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.gb	ENSGT00940000156526.b
Characoidei	ANCESTRAL SPECIES	56	ENSGT00940000164379.e.a	ENSGT00940000154194.c.a	ENSGT01030000234904	ENSGT00940000158277.b.a.b	ENSGT00940000156295.h	ENSGT00940000166427	ENSGT00940000156736.d	ENSGT00940000155353.b	ENSGT00940000156892.a	ENSGT00940000158417.a	ENSGT00940000159595	ENSGT00940000154735.d.b	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499.c	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000182486	ENSGT00940000155249.h	ENSGT00940000154953.a	ENSGT00440000037338	ENSGT00960000187553	ENSGT00950000183174.B.a.f	ENSGT00390000002932	ENSGT00940000157090.g	ENSGT00390000008183	ENSGT00390000004827	ENSGT00940000160288	ENSGT00390000008828.gb
Red-bellied piranha	MODERN SPECIES	21	ENSPNAG00000007883	nitr13 (ENSPNAG00000007879)	ENSPNAG00000000527	ENSPNAG00000007870	chrnb3b (ENSPNAG00000007860)	ENSPNAG00000007850	ENSPNAG00000007842	ENSPNAG00000007836	ENSPNAG00000007194	rack1 (ENSPNAG00000000469)	nme5 (ENSPNAG00000007792)	hnrnpaba (ENSPNAG00000000458)	eif4ebp3l (ENSPNAG00000007774)	hnrnph1 (ENSPNAG00000000439)	ENSPNAG00000007744	hbegfa (ENSPNAG00000007729) #22	ENSPNAG00000029577	slu7 (ENSPNAG00000006885)	C1QTNF2 (ENSPNAG00000029444)	ENSPNAG00000029437	NOCT (ENSPNAG00000029426)	elf2a (ENSPNAG00000029417)	ENSPNAG00000029410	ndufc1 (ENSPNAG00000004579)	naa15a (ENSPNAG00000006503)	mlsl (ENSPNAG00000029293)	rab33ba (ENSPNAG00000029115)	zgc:113425 (ENSPNAG00000029098)	setd7 (ENSPNAG00000006080)	mgst2 (ENSPNAG00000004498)	scocb (ENSPNAG00000029031)
Mexicana tetra	MODERN SPECIES	16	nitr13 (ENSAMXG00000036603)	ENSAMXG00000030942	ENSAMXG00000003086	chrnb3b (ENSAMXG00000003040)	ENSAMXG00000003015	ENSAMXG00000029021	ENSAMXG00000003013	ENSAMXG00000002754	ENSAMXG00000002614	rack1 (ENSAMXG00000002584)	nme5 (ENSAMXG00000029229)	eif4ebp3l (ENSAMXG00000042158)	hnrnpaba (ENSAMXG00000002560)	hnrnph1 (ENSAMXG00000002483)	ENSAMXG00000002449	hbegfa (ENSAMXG00000034387) #22	slu7 (ENSAMXG00000002404)	C1QTNF2 (ENSAMXG00000035234)	ENSAMXG00000036747	NOCT (ENSAMXG00000002383)	elf2a (ENSAMXG00000002354)	ndufc1 (ENSAMXG00000032959)	naa15a (ENSAMXG00000002242)	mlsl (ENSAMXG00000029978)	rab33ba (ENSAMXG00000040286)	zgc:113425 (ENSAMXG00000002168)	setd7 (ENSAMXG00000041773)	mgst2 (ENSAMXG00000039723)	scocb (ENSAMXG00000002131)	zgc:154054 (ENSAMXG00000002123)	ppid (ENSAMXG00000002090)
Electric eel	MODERN SPECIES	265						il12ba (ENSEEEG00000002321)	ENSEEEG00000002320	chrnb3b (ENSEEEG00000002314)	ENSEEEG00000002303	rack1 (ENSEEEG00000002290)	nme5 (ENSEEEG00000002250)	hnrnpaba (ENSEEEG00000002245)	eif4ebp3l (ENSEEEG00000002242)	hnrnph1 (ENSEEEG00000002239)	ENSEEEG00000002136	hbegfa (ENSEEEG00000002132) #22	slu7 (ENSEEEG00000002125)	C1QTNF2 (ENSEEEG00000002122)	NOCT (ENSEEEG00000002119)	elf2a (ENSEEEG00000002118)	ENSEEEG00000002116	ndufc1 (ENSEEEG00000002113)	naa15a (ENSEEEG00000000938)	mlsl (ENSEEEG00000000862)	rab33ba (ENSEEEG00000000860)	zgc:113425 (ENSEEEG00000000858)	setd7 (ENSEEEG00000000854)	scocb (ENSEEEG00000000841)	zgc:154054 (ENSEEEG00000000831)	ENSEEEG00000000825	ENSEEEG00000000822
Channel catfish	MODERN SPECIES	27	ENSIPUG00000018386	ENSIPUG00000018381	ENSIPUG00000018359	ENSIPUG00000018351	ENSIPUG00000018342	ENSIPUG00000018331	ENSIPUG00000018284	hnrnph1 (ENSIPUG00000018262)	eif4ebp3l (ENSIPUG00000018246)	HNRNPAB (ENSIPUG00000018218)	nme5 (ENSIPUG00000018174)	rack1 (ENSIPUG00000018129)	ENSIPUG00000018112	ENSIPUG00000018012	ENSIPUG00000018001	HBEGF (ENSIPUG00000017990) #22	slu7 (ENSIPUG00000017949)	c1qtnf2 (ENSIPUG00000017941)	Ccrn4l (ENSIPUG00000017932)	elf2 (ENSIPUG00000017922)	mgarpa (ENSIPUG00000017909)	ndufc1 (ENSIPUG00000017903)	naa15a (ENSIPUG00000017770)	ENSIPUG00000017762	mlsl (ENSIPUG00000017698)	rab33b (ENSIPUG00000017684)	zgc:113425 (ENSIPUG00000017674)	setd7 (ENSIPUG00000017667)	ENSIPUG00000017659	scocb (ENSIPUG00000017633)	mgat4d (ENSIPUG00000017556)
Cyprinoidei	ANCESTRAL SPECIES	45											ENSGT00940000159595	ENSGT00940000154735.d.b	ENSGT00940000163328.c	ENSGT00940000165206.d.e	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499.c	ENSGT00390000002731	ENSGT00940000164681	ENSGT00520000055589.d.a.a.a	ENSGT00520000055589.d.b	ENSGT00520000055589.d.a.a.b	ENSGT00390000006550	ENSGT00390000005922.b #8	ENSGT00940000159225 #9	ENSGT00940000165282.a	ENSGT00530000064262.pc.b	ENSGT00530000063652.a.b	ENSGT00390000008582 #30	ENSGT00940000165110.b	ENSGT00940000153169.B.f ##29
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	220									ENSGT00940000165778.f	ENSGT00940000154461.tc.a.a	ENSGT00940000159595	ENSGT00940000154735.d.b.a	ENSGT00940000163328.c.c	ENSGT00940000165206.d.e.a	ENSGT00940000158334.f	ENSGT00940000156901.A.d.a #22	ENSGT00940000154735.d.b.b	ENSGT00940000163328.c.d	ENSGT00940000165206.d.e.b	ENSGT00940000158334.e	ENSGT00940000156901.A.d.b #22	ENSGT00390000002731.d	ENSGT00940000164681.a	ENSGT00520000055589.d.a.a.a.b	ENSGT00520000055589.c.h	ENSGT00390000006550.d	ENSGT00390000005922.b.g #8	ENSGT00940000159225.s #9	ENSGT00940000165282.a.a	ENSGT00530000064262.pc.b.q	ENSGT00530000063652.a.b.h
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	1384											nme5 (ENSCARG00000030323)	hnrnpaba (ENSCARG00000030346)	eif4ebp3l (ENSCARG00000030376)	hnrnph1 (ENSCARG00000030391)	ENSCARG00000030553	hbegfa (ENSCARG00000033210) #22
Goldfish	MODERN SPECIES	5	ENSCARG00000021730	htra1a (ENSCARG00000021738)	plekha1a (ENSCARG00000021778)	ENSCARG00000021876	ikzf5 (ENSCARG00000021911)	hmx3a (ENSCARG00000021922)	hmx2 (ENSCARG00000021933)	ENSCARG00000021947	ENSCARG00000021962	rack1 (ENSCARG00000022235)	nme5 (ENSCARG00000022323)	hnrnpaba (ENSCARG00000022341)	eif4ebp3l (ENSCARG00000022352)	hnrnph1 (ENSCARG00000022373)	ENSCARG00000022417	hbegfa (ENSCARG00000022744) #22	trpt1 (ENSCARG00000022760)	ctsf (ENSCARG00000022779)	ENSCARG00000022813	ENSCARG00000022817	trappc11 (ENSCARG00000022826)	hars (ENSCARG00000022940) #8	dnd1 (ENSCARG00000024154) #9	gfra3 (ENSCARG00000024160)	brd8b (ENSCARG00000024187)	ENSCARG00000024636	sting1 (ENSCARG00000024650) #30	ppp3cb (ENSCARG00000024722)	ube2d2 (ENSCARG00000025785) ##29	zgc:110843 (ENSCARG00000026090)	CXXC5 (ENSCARG00000026111) #28
Cyprininae_a	ANCESTRAL SPECIES	520												ENSGT00940000154735.d.b.a	ENSGT00940000163328.c.c	ENSGT00940000165206.d.e.a	ENSGT00940000158334.f	ENSGT00940000156901.A.d.a #22	ENSGT00390000002731.c	ENSGT00940000164681.b	ENSGT00520000055589.d.a.a.a.a	ENSGT00390000006550.c	ENSGT00390000005922.b.h #8	ENSGT00940000159225.t #9	ENSGT00940000165282.a.b	ENSGT00530000064262.pc.b.r.a	ENSGT00530000063652.a.b.g
Common carp reference	MODERN SPECIES	35	ENSCCRG00000048933	ENSCCRG00000053162	SLC44A1 (ENSCCRG00000038452)	ENSCCRG00000062398	ENSCCRG00000016258	nipsnap3a (ENSCCRG00000016213)	ENSCCRG00000073862	ENSCCRG00000069514	ENSCCRG00000066619	ENSCCRG00000058552	rack1 (ENSCCRG00000062361)	hnrnpaba (ENSCCRG00000036255)	eif4ebp3l (ENSCCRG00000080715)	hnrnph1 (ENSCCRG00000036278)	ENSCCRG00000022795	hbegfa (ENSCCRG00000023650) #22	trpt1 (ENSCCRG00000024638)	ctsf (ENSCCRG00000023913)	ENSCCRG00000026553	trappc11 (ENSCCRG00000024577)	hars (ENSCCRG00000005913) #8	dnd1 (ENSCCRG00000062552) #9	gfra3 (ENSCCRG00000005529)	brd8b (ENSCCRG00000037745)	ENSCCRG00000080069	sting1 (ENSCCRG00000023085) #30	ppp3cb (ENSCCRG00000071308)	ube2d2 (ENSCCRG00000059308) ##29	zgc:110843 (ENSCCRG00000024025)	ENSCCRG00000024021 #28	zgc:92242 (ENSCCRG00000014627)
Golden-line barbel	MODERN SPECIES	88	TBC1D2 (ENSSGRG00000039833)	ENSSGRG00000039835	SLC44A1 (ENSSGRG00000039839)	ABCA1 (ENSSGRG00000039870)	nipsnap3a (ENSSGRG00000040185)	ENSSGRG00000040189	thg1l (ENSSGRG00000040193)	ENSSGRG00000040196	ENSSGRG00000040221	rack1 (ENSSGRG00000040885)	nme5 (ENSSGRG00000041174)	hnrnpaba (ENSSGRG00000041177)	eif4ebp3l (ENSSGRG00000041178)	hnrnph1 (ENSSGRG00000041189)	RUFY1 (ENSSGRG00000041279)	hbegfa (ENSSGRG00000041458) #22	trpt1 (ENSSGRG00000041461)	ctsf (ENSSGRG00000041463)	STOX2 (ENSSGRG00000041538)	trappc11 (ENSSGRG00000041553)	hars (ENSSGRG00000042354) #8	dnd1 (ENSSGRG00000043048) #9	gfra3 (ENSSGRG00000043049)	brd8b (ENSSGRG00000043062)	ENSSGRG00000043416
Cyprininae	ANCESTRAL SPECIES	220				ENSGT00940000165778.f	ENSGT00940000154461.tc.a.a	ENSGT00940000159595	ENSGT00940000154735.d.b.a	ENSGT00940000163328.c.c	ENSGT00940000165206.d.e.a	ENSGT00940000158334.f	ENSGT00940000156901.A.d.a #22	ENSGT00940000154735.d.b.b	ENSGT00940000163328.c.d	ENSGT00940000165206.d.e.b	ENSGT00940000158334.e	ENSGT00940000156901.A.d.b #22	ENSGT00390000002731.d	ENSGT00940000164681.a	ENSGT00520000055589.d.a.a.a.b	ENSGT00520000055589.c.h	ENSGT00390000006550.d	ENSGT00390000005922.b.g #8	ENSGT00940000159225.s #9	ENSGT00940000165282.a.a	ENSGT00530000064262.pc.b.q	ENSGT00530000063652.a.b.h	ENSGT00390000008582.a #30	ENSGT00940000165110.b.g	ENSGT00940000153169.B.e ##29	ENSGT00940000154445.b.c	ENSGT00940000154108.a.d.f.b #28
Goldfish	MODERN SPECIES	32	TBC1D2 (ENSCARG00000069496)	SLC44A1 (ENSCARG00000069529)	ABCA1 (ENSCARG00000069753)	nipsnap3a (ENSCARG00000070191)	ENSCARG00000070196	thg1l (ENSCARG00000070197)	ENSCARG00000070199	ENSCARG00000070200	gfCLK4a (ENSCARG00000070209)	rack1 (ENSCARG00000070227)	hnrnpaba (ENSCARG00000070242)	eif4ebp3l (ENSCARG00000070247)	ENSCARG00000070248	ENSCARG00000070261	ctsf (ENSCARG00000070302)	hbegfa (ENSCARG00000070328) #22	trpt1 (ENSCARG00000070330)	ENSCARG00000070331	trappc11 (ENSCARG00000006107)	hars (ENSCARG00000006383) #8	dnd (ENSCARG00000006686) #9	gfra3 (ENSCARG00000006698)	brd8b (ENSCARG00000006727)	ENSCARG00000006873	sting1 (ENSCARG00000006878) #30	ppp3cb (ENSCARG00000007001)	ENSCARG00000009478 ##29	zgc:110843 (ENSCARG00000009672)	CXXC5 (ENSCARG00000009680) #28	zgc:92242 (ENSCARG00000009685)	PSD2 (ENSCARG00000009716) #27
Cyprininae_a	ANCESTRAL SPECIES	72	ENSGT00390000013344.i	ENSGT00940000159937.i	ENSGT00940000157174.d.a	ENSGT00940000154658.b.i.a.b	ENSGT00950000183018.b.i	ENSGT01030000234799.e	ENSGT00390000011705.g.b	ENSGT00940000159624.d	ENSGT00940000165778.f	ENSGT00940000154461.tc.a.a	ENSGT00940000159595	ENSGT00940000154735.d.b.b	ENSGT00940000163328.c.d	ENSGT00940000165206.d.e.b	ENSGT00940000158334.e	ENSGT00940000156901.A.d.b #22	ENSGT00390000002731.d	ENSGT00940000164681.a	ENSGT00520000055589.d.a.a.a.b	ENSGT00520000055589.c.h	ENSGT00390000006550.d	ENSGT00390000005922.b.g #8	ENSGT00940000159225.s #9	ENSGT00940000165282.a.a	ENSGT00530000064262.pc.b.q	ENSGT00530000063652.a.b.h	ENSGT00390000008582.a #30	ENSGT00940000165110.b.g	ENSGT00940000153169.B.e ##29	ENSGT00940000154445.b.c	ENSGT00940000154108.a.d.f.b #28
Common carp reference	MODERN SPECIES	20	ENSCCRG00000001401	SLC44A1 (ENSCCRG00000017016)	ENSCCRG00000071471	nipsnap3a (ENSCCRG00000081347)	ENSCCRG00000055060	thg1l (ENSCCRG00000016202)	ENSCCRG00000015276	ENSCCRG00000055662	ENSCCRG00000031662	ENSCCRG00000035988	rack1 (ENSCCRG00000036241)	hnrnpaba (ENSCCRG00000066529)	eif4ebp3l (ENSCCRG00000036257)	hnrnph1 (ENSCCRG00000022763)	ENSCCRG00000036268	hbegfa (ENSCCRG00000030451) #22	trpt1 (ENSCCRG00000078840)	ctsf (ENSCCRG00000024650)	ENSCCRG00000022407	trappc11 (ENSCCRG00000034877)	hars (ENSCCRG00000057390) #8	dnd1 (ENSCCRG00000034954) #9	gfra3 (ENSCCRG00000018333)	brd8b (ENSCCRG00000023071)	ENSCCRG00000054648	sting1 (ENSCCRG00000059466) #30	ppp3cb (ENSCCRG00000042184)	ENSCCRG00000050789 ##29	zgc:110843 (ENSCCRG00000050782)	ENSCCRG00000050781 #28	zgc:92242 (ENSCCRG00000063209)
Golden-line barbel	MODERN SPECIES	678								ENSSGRG00000024920	rack1 (ENSSGRG00000024499)	nme5 (ENSSGRG00000024489)	hnrnpaba (ENSSGRG00000024488)	hnrnph1 (ENSSGRG00000024486)	ENSSGRG00000024485	ENSSGRG00000024482	ENSSGRG00000024480	hbegfa (ENSSGRG00000024476) #22	trpt1 (ENSSGRG00000024475)	ctsf (ENSSGRG00000023990)	STOX2 (ENSSGRG00000023985)	ENSSGRG00000023984	trappc11 (ENSSGRG00000022830)	hars (ENSSGRG00000022583) #8	dnd1 (ENSSGRG00000022574) #9	gfra3 (ENSSGRG00000022572)	brd8b (ENSSGRG00000022569)	ENSSGRG00000022565	sting1 (ENSSGRG00000022563) #30	ppp3cb (ENSSGRG00000022164)	ENSSGRG00000022155 ##29	zgc:110843 (ENSSGRG00000022154)	CXXC5 (ENSSGRG00000022153) #28
Zebrafish	MODERN SPECIES	5	SLC44A1 (ENSDARG00000090982)	abca1b (ENSDARG00000079009)	nipsnap3a (ENSDARG00000020387)	thg1l (ENSDARG00000038360)	ENSDARG00000067545	ENSDARG00000092493	ENSDARG00000095339	ENSDARG00000100249	ENSDARG00000089372	rack1 (ENSDARG00000041619)	nme5 (ENSDARG00000041617)	hnrnpaba (ENSDARG00000007960)	eif4ebp3l (ENSDARG00000041607)	hnrnph1 (ENSDARG00000040881)	RUFY1 (ENSDARG00000078685)	hbegfa (ENSDARG00000075121) #22	ENSDARG00000100596	trpt1 (ENSDARG00000037628)	ctsf (ENSDARG00000063095)	STOX2 (ENSDARG00000078572)	ENSDARG00000099304	trappc11 (ENSDARG00000004726)	hars (ENSDARG00000003693) #8	dnd1 (ENSDARG00000022813) #9	gfra3 (ENSDARG00000087704)	brd8b (ENSDARG00000025071)	sting1 (ENSDARG00000091058) #30	ppp3cb (ENSDARG00000025106)	ube2d2 (ENSDARG00000043484) ##29	zgc:110843 (ENSDARG00000073845)	ENSDARG00000075735 #28
Clupeiformes	ANCESTRAL SPECIES	277	ENSGT00940000156413	ENSGT00940000158327	ENSGT00950000183015.E	ENSGT00940000165778	ENSGT00940000166182	ENSGT00940000161005	ENSGT00390000013284	ENSGT00940000161151	ENSGT00940000157929	ENSGT00960000189941	ENSGT00940000163328.c	ENSGT00940000163328.d	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00390000002292.b	ENSGT00940000159591
Denticle herring	MODERN SPECIES	9	SLITRK4 (ENSDCDG00000026773)	ENSDCDG00000026771	ENSDCDG00000026764	SLITRK2 (ENSDCDG00000026762)	hspa9 (ENSDCDG00000016992)	FOXO4 (ENSDCDG00000016782)	ENSDCDG00000016780	zgc:92907 (ENSDCDG00000016778)	rap2c (ENSDCDG00000016775)	MAP7D3 (ENSDCDG00000016761)	fhl1a (ENSDCDG00000016748)	ENSDCDG00000016747	slc9a6a (ENSDCDG00000016674)	mmgt1 (ENSDCDG00000016670)	RUFY1 (ENSDCDG00000015858)	hbegfa (ENSDCDG00000015806) #22	slu7 (ENSDCDG00000015459)	C1QTNF2 (ENSDCDG00000015439)	rnf130 (ENSDCDG00000014938)	F2RL3 (ENSDCDG00000014920)	lect2.1 (ENSDCDG00000014919)	TBC1D9B (ENSDCDG00000014583)	ENSDCDG00000014543	pmt (ENSDCDG00000014536)	ENSDCDG00000014522	TLX3 (ENSDCDG00000014513)	hrh2a (ENSDCDG00000014511)	ENSDCDG00000014509	DOCK2 (ENSDCDG00000010414)	TRPC7 (ENSDCDG00000009794)	ENSDCDG00000009735
Atlantic herring	MODERN SPECIES	12	ENSCHAG00000008344	ENSCHAG00000008367	GFPT2 (ENSCHAG00000008486)	ENSCHAG00000013187	ENSCHAG00000013813	ENSCHAG00000013818	RASGEF1C (ENSCHAG00000013832)	tmem129 (ENSCHAG00000014324)	atoh8 (ENSCHAG00000014332)	st3gal5 (ENSCHAG00000014342)	ENSCHAG00000014416	eif4ebp3l (ENSCHAG00000014432)	ENSCHAG00000014498 #20	hnrnph1 (ENSCHAG00000017133)	RUFY1 (ENSCHAG00000017418)	hbegfa (ENSCHAG00000018336) #22	slu7 (ENSCHAG00000018390)	ccnjl (ENSCHAG00000018829)	adra1bb (ENSCHAG00000018835)	SOD3 (ENSCHAG00000018857)	ENSCHAG00000018884	tmem216 (ENSCHAG00000018903)	ENSCHAG00000018916	cul4b (ENSCHAG00000019014)	lamp2 (ENSCHAG00000020838)	ENSCHAG00000020851	TMEM255A (ENSCHAG00000020889)	zbtb33 (ENSCHAG00000020901)	nkap (ENSCHAG00000020904)	ndufa1 (ENSCHAG00000020916)	upf3b (ENSCHAG00000020923)
Euteleosteomorpha	ANCESTRAL SPECIES	69	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a	ENSGT00440000033329.a.a.a	ENSGT00940000165241	ENSGT00940000154444.B	ENSGT00940000158850	ENSGT00500000044831.a.a.b	ENSGT00390000007135	ENSGT00940000164327.b	ENSGT01030000234566.e.b.a.b.c.a	ENSGT00940000165340	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Protacanthopterygii	ANCESTRAL SPECIES	19	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a	ENSGT00440000033329.a.a.a	ENSGT00940000165241	ENSGT00940000154444.B	ENSGT00940000158850	ENSGT00500000044831.a.a.b	ENSGT00390000007135	ENSGT00940000164327.b	ENSGT01030000234566.e.b.a.b.c.a	ENSGT00940000165340	ENSGT00940000163328.c	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000007501	ENSGT00390000012630.A.b	ENSGT00950000182859.A.a.b.b.d.c.a	ENSGT00940000155650.a.b.d	ENSGT00940000155650.a.a	ENSGT00390000012944
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	797											ENSGT01030000234566.e.b.a.b.c.a.y.b.a	ENSGT00940000163328.c.a.b	ENSGT00940000153768.b.t.a.a #20	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c #22	ENSGT00940000168499.b	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d
Salmoninae_a	ANCESTRAL SPECIES	18	ENSGT00940000167593	ENSGT00940000157342.c.a.d	ENSGT00440000033329.a.a.a.i	ENSGT00940000165241.c	ENSGT00940000158850.p	ENSGT00500000044831.a.a.a.a.b.b	ENSGT00390000007135.h	ENSGT01030000234566.e.b.a.b.c.a.z.a	ENSGT00940000165340.k.b	ENSGT00940000163328.c.b	ENSGT00940000153768.b.t.a.b.b #20	ENSGT00940000163328.c.a.b	ENSGT00940000153768.b.t.a.a #20	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c #22	ENSGT00940000168499.b	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00390000012944.i	ENSGT00390000011705.v.a	ENSGT00940000159624.h	ENSGT01030000234518.A.a.b.g	ENSGT00950000182864.a.b.b.a.b.a.b.b.b	ENSGT00390000014165.i	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a
Oncorhynchus	ANCESTRAL SPECIES	45	ENSGT01030000235237	ENSGT00940000157840.b	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a.d	ENSGT00440000033329.a.a.a.i	ENSGT00940000165241.c	ENSGT00940000154444.B	ENSGT00940000158850.p	ENSGT00500000044831.a.a.a.a.b.b	ENSGT00390000007135.h	ENSGT01030000234566.e.b.a.b.c.a.z.a	ENSGT00940000165340.k.b	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c #22	ENSGT00940000168499.b	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00950000182850.a.b.a.b.a.b.h.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d	ENSGT00950000182859.A.a.b.b.d.c.a.a.b	ENSGT00940000155650.a.a.f	ENSGT00390000012944.i	ENSGT00940000159624.h.b	ENSGT01030000234518.A.a.b.g
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000003425	ENSOMYG00000036723	ENSOMYG00000008277	gria1a (ENSOMYG00000011311)	ENSOMYG00000011569	ENSOMYG00000011586	itk (ENSOMYG00000011594)	cyfip2 (ENSOMYG00000011670)	ENSOMYG00000057655	ENSOMYG00000066407	eif4ebp3l (ENSOMYG00000011863)	ENSOMYG00000011886 #20	ENSOMYG00000051547	hnrnph1 (ENSOMYG00000011895)	ENSOMYG00000011955	ENSOMYG00000012093 #22	ENSOMYG00000060465	ENSOMYG00000012121	ENSOMYG00000048509	ENSOMYG00000069189	ENSOMYG00000012242	afap1l1a (ENSOMYG00000012254)	ENSOMYG00000053543	SH3TC2 (ENSOMYG00000019579)	ENSOMYG00000071793	ENSOMYG00000050866	ENSOMYG00000076178	ENSOMYG00000015114	EBF1 (ENSOMYG00000015081)	ENSOMYG00000066391	LSM11 (ENSOMYG00000015096)
Oncorhynchus_a	ANCESTRAL SPECIES	46	ENSGT00940000160294	ENSGT00940000157994.h	ENSGT00940000166590.c.a	ENSGT01030000235237	ENSGT00940000157840.b	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a.c.b.b	ENSGT00440000033329.a.a.a.i	ENSGT00940000165241.c	ENSGT00940000154444.B	ENSGT00940000158850.p	ENSGT00500000044831.a.a.a.a.b.b	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c #22	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00940000155650.a.a.f	ENSGT00390000012944.i	ENSGT00940000159624.h.b	ENSGT01030000234518.A.a.b.g	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165.i	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a	ENSGT00940000154998.a.b.a.a
Coho salmon	MODERN SPECIES	10	zgc:194246 (ENSOKIG00005036963)	ENSOKIG00005036981	WNT8A (ENSOKIG00005037023)	ENSOKIG00005037044	ENSOKIG00005037062	gria1a (ENSOKIG00005037097)	ENSOKIG00005037256	ENSOKIG00005037282	cyfip2 (ENSOKIG00005037307)	ENSOKIG00005037493	ENSOKIG00005037501	TENM2 (ENSOKIG00005037787)	ENSOKIG00005038796	hnrnph1 (ENSOKIG00005039171)	RUFY1 (ENSOKIG00005039317)	hbegfa (ENSOKIG00005040047) #22	rmnd5b (ENSOKIG00005040087)	ENSOKIG00005040327	ENSOKIG00005040357	afap1l1a (ENSOKIG00005040370)	ENSOKIG00005040391	SH3TC2 (ENSOKIG00005040449)	ENSOKIG00005040534	ADRB2 (ENSOKIG00005040557)	ENSOKIG00005040566	ENSOKIG00005040602	EBF1 (ENSOKIG00005040636)	CLINT1 (ENSOKIG00005040748)	LSM11 (ENSOKIG00005041226)	ENSOKIG00005041247	ENSOKIG00005041385
Chinook salmon	MODERN SPECIES	13	ENSOTSG00005037365 #28	zgc:110843 (ENSOTSG00005037366)	ube2d2 (ENSOTSG00005037367) ##29	ENSOTSG00005037368	sting1 (ENSOTSG00005037369) #30	ENSOTSG00005037371	brd8b (ENSOTSG00005037374)	MFAP4 (ENSOTSG00005037375)	ENSOTSG00005037376	ENSOTSG00005037377	ENSOTSG00005037378	ENSOTSG00005037380	cyfip2 (ENSOTSG00005037429)	hnrnph1 (ENSOTSG00005037927)	ENSOTSG00005037933	hbegfa (ENSOTSG00005038114) #22	rpl26 (ENSOTSG00005038116)	BNIP1 (ENSOTSG00005038118)	nkx2.5 (ENSOTSG00005038119)	STC2 (ENSOTSG00005038121)	ENSOTSG00005038125	msx2a (ENSOTSG00005038163)	DRD1 (ENSOTSG00005038164)	TMEM131 (ENSOTSG00005038165)	UBE3A (ENSOTSG00005038170)	ENSOTSG00005038686	ENSOTSG00005038687	nudt15 (ENSOTSG00005038688)	cpo (ENSOTSG00005038691)	cpo (ENSOTSG00005038693)	ENSOTSG00005038700
Salmo	ANCESTRAL SPECIES	24	ENSGT00940000166590.c	ENSGT01030000235237.c	ENSGT00940000157840.b	ENSGT00940000157840.a	ENSGT00940000157342.c.a.d	ENSGT00440000033329.a.a.a.i	ENSGT00940000165241.c	ENSGT00940000158850.p	ENSGT00500000044831.a.a.a.a.b.b	ENSGT00390000007135.h	ENSGT01030000234566.e.b.a.b.c.a.z.a	ENSGT00940000165340.k.b	ENSGT00940000163328.c.a.b	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c #22	ENSGT00940000168499.b	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT01030000235237.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501.e	ENSGT00390000012630.A.b.d	ENSGT00950000182859.A.a.b.b.d.c.a.a.b	ENSGT00940000155650.a.a.f	ENSGT00390000012944.i	ENSGT00390000011705.v.a
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000114443	med7 (ENSSSAG00000045179)	itk (ENSSSAG00000045038)	cyfip2 (ENSSSAG00000044651)	ENSSSAG00000044580	ENSSSAG00000044564	ENSSSAG00000114676	ENSSSAG00000042382	ENSSSAG00000105392	4EBP (ENSSSAG00000044218)	ANKHD1 (ENSSSAG00000037820) #20	ENSSSAG00000095630	ENSSSAG00000117628	hnrnph1 (ENSSSAG00000041962)	ENSSSAG00000115941	hbegfa (ENSSSAG00000041283) #22	ENSSSAG00000091861	ENSSSAG00000081971	ENSSSAG00000039848	ENSSSAG00000121770	ENSSSAG00000095964	zgc:194246 (ENSSSAG00000002338)	ENSSSAG00000106889	afap1l1a (ENSSSAG00000068597)	ENSSSAG00000068581	SH3TC2 (ENSSSAG00000044258)	ENSSSAG00000119290	efcab9 (ENSSSAG00000068958)	ENSSSAG00000068948	EBF1 (ENSSSAG00000115078)	ENSSSAG00000068917
River trout	MODERN SPECIES	22	WNT8A (ENSSTUG00000003712)	gria1a (ENSSTUG00000003607)	ENSSTUG00000003590	ENSSTUG00000003580	ENSSTUG00000003574	ENSSTUG00000003555	cyfip2 (ENSSTUG00000003364)	hmmr (ENSSTUG00000003284)	ENSSTUG00000003277	TENM2 (ENSSTUG00000001894)	ENSSTUG00000001787	ENSSTUG00000001783	eif4ebp3l (ENSSTUG00000001765)	hnrnph1 (ENSSTUG00000001666)	ENSSTUG00000001510	hbegfa (ENSSTUG00000001485) #22	ENSSTUG00000001479	rmnd5b (ENSSTUG00000001443)	ENSSTUG00000001432	foxi3b (ENSSTUG00000001426)	afap1l1a (ENSSTUG00000001384)	ABLIM3 (ENSSTUG00000001359)	SH3TC2 (ENSSTUG00000001286)	ENSSTUG00000001266	adrb2a (ENSSTUG00000001260)	EFCAB9 (ENSSTUG00000001251)	il12ba (ENSSTUG00000001143)	ENSSTUG00000001134	EBF1 (ENSSTUG00000001083)	ENSSTUG00000001066	clint1a (ENSSTUG00000001024)
Huchen	MODERN SPECIES	1438												ENSHHUG00000033137	eif4ebp3l (ENSHHUG00000033127)	hnrnph1 (ENSHHUG00000033091)	ENSHHUG00000033082	hbegfa (ENSHHUG00000033076) #22	rmnd5b (ENSHHUG00000033060)	ENSHHUG00000033046
Salmoninae	ANCESTRAL SPECIES	559					ENSGT00500000044831.a.a.a.a.b.b	ENSGT00390000007135.h	ENSGT01030000234566.e.b.a.b.c.a.z	ENSGT00940000165340.k.a	ENSGT00940000163328.c.a.a	ENSGT00940000153768.b.t.a.b.a.a.b #20	ENSGT00940000165340.k.b	ENSGT00940000163328.c.b	ENSGT00940000153768.b.t.a.b.b #20	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d #22	ENSGT00940000168499.a	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663
Huchen	MODERN SPECIES	4510												ENSHHUG00000050808	ENSHHUG00000050807 #20	hnrnph1 (ENSHHUG00000050794)	ENSHHUG00000050782	hbegfa (ENSHHUG00000050781) #22
Salmoninae_a	ANCESTRAL SPECIES	41	ENSGT00940000157342.c.a.c.a	ENSGT00440000033329.a.a.a.j	ENSGT00940000165241.d	ENSGT00940000158850.o	ENSGT00500000044831.a.a.b	ENSGT00500000044831.a.a.a.a.b.a	ENSGT00390000007135.g	ENSGT00940000164327.b	ENSGT01090000260313.a.a.b.a	ENSGT01030000234566.e.b.a.b.c.a.z.b	ENSGT00940000165340.k.a	ENSGT00940000163328.c.a.a	ENSGT00940000153768.b.t.a.b.a.a.b #20	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d #22	ENSGT00940000168499.a	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d	ENSGT00950000182859.A.a.b.b.d.c.a.a.b
Oncorhynchus	ANCESTRAL SPECIES	34	ENSGT00940000166590.d.b	ENSGT00940000157342.c.a.c.a	ENSGT00440000033329.a.a.a.j	ENSGT00940000165241.d	ENSGT00940000158850.o	ENSGT00500000044831.a.a.a.a.b.a	ENSGT00390000007135.g	ENSGT00940000164327.b	ENSGT01090000260313.a.a.b.a	ENSGT01030000234566.e.b.a.b.c.a.z.b	ENSGT00940000165340.k.a	ENSGT00940000163328.c.a.a	ENSGT00940000153768.b.t.a.b.a.a.b #20	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d #22	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h.b	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00390000012630.A.b.c	ENSGT00940000154967.a.a.b.i	ENSGT00950000182859.A.a.b.b.d.c.a.b.b	ENSGT00940000155650.a.a.e	ENSGT00390000011705.v.a	ENSGT00940000159624.g	ENSGT01030000234518.A.a.b.h
Oncorhynchus_a	ANCESTRAL SPECIES	34	ENSGT00940000162696.c.a.a	ENSGT00940000159450.a.b	ENSGT00940000157994.g	ENSGT00940000166590.d.b	ENSGT00940000157342.c.a.c.a	ENSGT00440000033329.a.a.a.j	ENSGT00940000165241.d	ENSGT00500000044831.a.a.a.a.b.a	ENSGT00390000007135.g	ENSGT00940000164327.b	ENSGT00940000165340.k.a	ENSGT00940000163328.c.a.a	ENSGT00940000153768.b.t.a.b.a.a.b #20	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d #22	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h.b	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00390000012630.A.b.c	ENSGT00940000154967.a.a.b.i	ENSGT00950000182859.A.a.b.b.d.c.a.b.b	ENSGT00940000155650.a.a.e	ENSGT00390000011705.v.a	ENSGT00940000159624.g	ENSGT01030000234518.A.a.b.h
Chinook salmon	MODERN SPECIES	329								rgs11 (ENSOTSG00005026670)	ints15 (ENSOTSG00005026669)	ENSOTSG00005026668	eif4ebp3l (ENSOTSG00005026667)	ENSOTSG00005026665 #20	ENSOTSG00005026663 #20	hnrnph1 (ENSOTSG00005026658)	RUFY1 (ENSOTSG00005028201)	hbegfa (ENSOTSG00005028200) #22
Coho salmon	MODERN SPECIES	6	cyfip2 (ENSOKIG00005028822)	hmmr (ENSOKIG00005028767)	ENSOKIG00005028701	ENSOKIG00005028689	ENSOKIG00005028688	ENSOKIG00005028679	ENSOKIG00005028674	ENSOKIG00005028662	TENM2 (ENSOKIG00005028066)	ENSOKIG00005027968	ENSOKIG00005027963	eif4ebp3l (ENSOKIG00005027920)	ANKHD1 (ENSOKIG00005027463) #20	hnrnph1 (ENSOKIG00005027387)	ENSOKIG00005027181	hbegfa (ENSOKIG00005027158) #22	ENSOKIG00005027147	RMND5B (ENSOKIG00005026915)	ENSOKIG00005026900	foxi3b (ENSOKIG00005026891)	ENSOKIG00005026883	ENSOKIG00005026877	ABLIM3 (ENSOKIG00005026342)	SH3TC2 (ENSOKIG00005026136)	adrb2a (ENSOKIG00005026111)	il12ba (ENSOKIG00005026108)	ENSOKIG00005026091	ENSOKIG00005026069	ENSOKIG00005026058	ENSOKIG00005026048	ENSOKIG00005026042
Rainbow trout	MODERN SPECIES	23	ENSOMYG00000039575	cyfip2 (ENSOMYG00000069753)	hmmr (ENSOMYG00000011840)	ENSOMYG00000049217	ENSOMYG00000054429	ENSOMYG00000072941	ENSOMYG00000071734	ENSOMYG00000054251	ENSOMYG00000077500	ENSOMYG00000019826	eif4ebp3l (ENSOMYG00000019823)	ANKHD1 (ENSOMYG00000019798) #20	ENSOMYG00000060642	hnrnph1 (ENSOMYG00000019772)	ENSOMYG00000019758	hbegfa (ENSOMYG00000076381) #22	ENSOMYG00000073400	ENSOMYG00000068554	ENSOMYG00000019667	ENSOMYG00000048809	foxi3b (ENSOMYG00000019630)	ENSOMYG00000075117	afap1l1a (ENSOMYG00000019614)	ENSOMYG00000072163	SH3TC2 (ENSOMYG00000071494)	ENSOMYG00000052680	ENSOMYG00000058892	ENSOMYG00000072099	ENSOMYG00000071779	ENSOMYG00000072216	il12ba (ENSOMYG00000019564)
Salmo	ANCESTRAL SPECIES	47	ENSGT00940000157342.c.a.c.b.a	ENSGT00940000157342.c.a.c.a	ENSGT00440000033329.a.a.a.j	ENSGT00940000165241.d	ENSGT00500000044831.a.a.b	ENSGT00390000007135.g	ENSGT00940000164327.b	ENSGT01090000260313.a.a.b.a	ENSGT01030000234566.e.b.a.b.c.a.z.b	ENSGT00940000165340.k.a	ENSGT00940000163328.c.a.a	ENSGT00940000163328.c.b	ENSGT00940000153768.b.t.a.b.b #20	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d #22	ENSGT00940000168499.a	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00390000007501.f	ENSGT00390000012630.A.b.c	ENSGT00940000154967.a.a.b	ENSGT00950000182859.A.a.b.b.d.c.a.a.a	ENSGT00940000155650.a.a.e	ENSGT00390000012944.j
River trout	MODERN SPECIES	4	gria1a (ENSSTUG00000041084)	ENSSTUG00000041409	ENSSTUG00000041431	itk (ENSSTUG00000041485)	cyfip2 (ENSSTUG00000042606)	ENSSTUG00000043104	ENSSTUG00000043108	ENSSTUG00000043115	ENSSTUG00000043128	ENSSTUG00000043145	ENSSTUG00000043158	eif4ebp3l (ENSSTUG00000043166)	ENSSTUG00000043299 #20	hnrnph1 (ENSSTUG00000045375)	ENSSTUG00000045393	hbegfa (ENSSTUG00000045420) #22	ENSSTUG00000045434	rmnd5b (ENSSTUG00000045442)	ENSSTUG00000045520	foxi3b (ENSSTUG00000045541)	ENSSTUG00000045548	afap1l1a (ENSSTUG00000045558)	ABLIM3 (ENSSTUG00000045596)	SH3TC2 (ENSSTUG00000045662)	ENSSTUG00000045920	adrb2a (ENSSTUG00000045922)	ENSSTUG00000045926	il12ba (ENSSTUG00000045936)	ENSSTUG00000045947	ENSSTUG00000045961	ENSSTUG00000046030
Atlantic salmon	MODERN SPECIES	28	itk (ENSSSAG00000041613)	ENSSSAG00000015374	cyfip2 (ENSSSAG00000015924)	hmmr (ENSSSAG00000041733)	ENSSSAG00000041797	ENSSSAG00000103320	ENSSSAG00000096829	ENSSSAG00000090073	ENSSSAG00000070965	cystm1 (ENSSSAG00000071594)	eif4ebp3l (ENSSSAG00000071597)	ENSSSAG00000037917	ANKHD1 (ENSSSAG00000071680) #20	hnrnph1 (ENSSSAG00000038087)	ENSSSAG00000100256	hbegfa (ENSSSAG00000039824) #22	ENSSSAG00000106022	ENSSSAG00000085319	ENSSSAG00000040143	foxi3b (ENSSSAG00000040153)	ENSSSAG00000068610	ENSSSAG00000040168	ENSSSAG00000087064	afap1l1a (ENSSSAG00000040443)	ENSSSAG00000040583	SH3TC2 (ENSSSAG00000041691)	ENSSSAG00000041803	ENSSSAG00000098102	il12ba (ENSSSAG00000041830)	ENSSSAG00000041836	EBF1 (ENSSSAG00000041858)
Northern pike	MODERN SPECIES	3	ENSELUG00000006070	ENSELUG00000006076	itk (ENSELUG00000006111)	cyfip2 (ENSELUG00000006177)	hmmr (ENSELUG00000006233)	ENSELUG00000006401	ENSELUG00000030256	ENSELUG00000024758	TENM2 (ENSELUG00000006563)	ENSELUG00000006587	ENSELUG00000030472	eif4ebp3l (ENSELUG00000006596)	ANKHD1 (ENSELUG00000006674) #20	hnrnph1 (ENSELUG00000006715)	RUFY1 (ENSELUG00000006741)	hbegfa (ENSELUG00000006753) #22	rmnd5b (ENSELUG00000006778)	ENSELUG00000006800	zgc:194246 (ENSELUG00000000219)	foxi3b (ENSELUG00000006819)	ENSELUG00000006843	afap1l1a (ENSELUG00000006908)	ABLIM3 (ENSELUG00000006966)	SH3TC2 (ENSELUG00000007026)	adrb2a (ENSELUG00000007046)	ENSELUG00000033617	ENSELUG00000007054	il12ba (ENSELUG00000007092)	ENSELUG00000026279	EBF1 (ENSELUG00000007199)	clint1a (ENSELUG00000001078)
Acanthomorphata	ANCESTRAL SPECIES	1	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Euacanthomorphacea	ANCESTRAL SPECIES	10	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Percomorphaceae	ANCESTRAL SPECIES	11	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Tiger tail seahorse	DUPLICATION
Tiger tail seahorse	MODERN SPECIES	175	ergic1 (ENSHCOG00000004875)	flt4 (ENSHCOG00000004852)	npy7r (ENSHCOG00000004771)	prelid1a (ENSHCOG00000004761)	mxd3 (ENSHCOG00000004743)	ENSHCOG00000004735	DDX41 (ENSHCOG00000004725)	ENSHCOG00000004692	unc5a (ENSHCOG00000004680)	pdlim7 (ENSHCOG00000004643)	CLTB (ENSHCOG00000004609)	higd2a (ENSHCOG00000004587)	ankhd1 (ENSHCOG00000004576) #20	hnrnph1 (ENSHCOG00000004513)	ENSHCOG00000004486	hbegfa (ENSHCOG00000004477) #22	hbegfa (ENSHCOG00000004467) #22	ENSHCOG00000004449	rmnd5b (ENSHCOG00000004439)	PIGG (ENSHCOG00000004396)	GUF1 (ENSHCOG00000004355)	GABRA2 (ENSHCOG00000004295)	gabra4 (ENSHCOG00000003949)	ENSHCOG00000003925	ENSHCOG00000003890	ap1ar (ENSHCOG00000003878)	smad5 (ENSHCOG00000003847)	syvn1 (ENSHCOG00000003821)	gpr137 (ENSHCOG00000003804)	ENSHCOG00000003794	smim19 (ENSHCOG00000003779)
Tiger tail seahorse	MODERN SPECIES	175	fam199x (ENSHCOG00000003763)	smim19 (ENSHCOG00000003779)	ENSHCOG00000003794	gpr137 (ENSHCOG00000003804)	syvn1 (ENSHCOG00000003821)	smad5 (ENSHCOG00000003847)	ap1ar (ENSHCOG00000003878)	ENSHCOG00000003890	ENSHCOG00000003925	gabra4 (ENSHCOG00000003949)	GABRA2 (ENSHCOG00000004295)	GUF1 (ENSHCOG00000004355)	PIGG (ENSHCOG00000004396)	rmnd5b (ENSHCOG00000004439)	ENSHCOG00000004449	hbegfa (ENSHCOG00000004467) #22	hbegfa (ENSHCOG00000004477) #22	ENSHCOG00000004486	hnrnph1 (ENSHCOG00000004513)	ankhd1 (ENSHCOG00000004576) #20	higd2a (ENSHCOG00000004587)	CLTB (ENSHCOG00000004609)	pdlim7 (ENSHCOG00000004643)	unc5a (ENSHCOG00000004680)	ENSHCOG00000004692	DDX41 (ENSHCOG00000004725)	ENSHCOG00000004735	mxd3 (ENSHCOG00000004743)	prelid1a (ENSHCOG00000004761)	npy7r (ENSHCOG00000004771)	flt4 (ENSHCOG00000004852)
Percomorphaceae_B	ANCESTRAL SPECIES	14	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Percomorphaceae_C	ANCESTRAL SPECIES	16	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000161724	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166
Eupercaria	ANCESTRAL SPECIES	12	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Tetraodontidae	ANCESTRAL SPECIES	9	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00840000131501	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000153503	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581	ENSGT00950000183175.B.a
Fugu	MODERN SPECIES	5	flt4 (ENSTRUG00000005654)	trim105 (ENSTRUG00000025502)	npy7r (ENSTRUG00000005549)	prelid1 (ENSTRUG00000005382)	mxd3 (ENSTRUG00000004989)	FAM193B (ENSTRUG00000004897)	DDX41 (ENSTRUG00000004445)	atoh1b (ENSTRUG00000025135)	unc5a (ENSTRUG00000003464)	pdlim7 (ENSTRUG00000002581)	ENSTRUG00000029395	CLTB (ENSTRUG00000002197)	higd2a (ENSTRUG00000020919)	ankhd1 (ENSTRUG00000001146) #20	hnrnph1 (ENSTRUG00000020069)	hbegfa (ENSTRUG00000023707) #22	ENSTRUG00000026250	rmnd5b (ENSTRUG00000000768)	N4BP3 (ENSTRUG00000000707)	ENSTRUG00000013203	ENSTRUG00000013020	anxa6 (ENSTRUG00000012567)	tnip1 (ENSTRUG00000012367)	GPX6 (ENSTRUG00000025873)	dctn4 (ENSTRUG00000012192)	ENSTRUG00000025324	tspan17 (ENSTRUG00000012091)	ENSTRUG00000011989	ctnna1 (ENSTRUG00000011631)	LRRTM2 (ENSTRUG00000011932)	sncb (ENSTRUG00000011552)
Tetraodon	MODERN SPECIES		flt4 (ENSTNIG00000008986)	trim105 (ENSTNIG00000008987)	npy7r (ENSTNIG00000001581)	prelid1a (ENSTNIG00000008988)	mxd3 (ENSTNIG00000008989)	FAM193B (ENSTNIG00000008990)	DDX41 (ENSTNIG00000008991)	ENSTNIG00000000026	unc5a (ENSTNIG00000008992)	pdlim7 (ENSTNIG00000008993)	CLTB (ENSTNIG00000008994)	higd2a (ENSTNIG00000008995)	ankhd1 (ENSTNIG00000008996) #20	HNRNPH1 (ENSTNIG00000008997)	RUFY1 (ENSTNIG00000008998)	hbegfa (ENSTNIG00000008999) #22	rmnd5b (ENSTNIG00000009000)	N4BP3 (ENSTNIG00000001513)	ENSTNIG00000009001	ENSTNIG00000009002	anxa6 (ENSTNIG00000009003)	tnip1 (ENSTNIG00000009004)	gpx3 (ENSTNIG00000000753)	dctn4 (ENSTNIG00000009005)	ENSTNIG00000000876	tspan17 (ENSTNIG00000009006)	ENSTNIG00000009007	ctnna1 (ENSTNIG00000009008)	sncb (ENSTNIG00000005611)	ENSTNIG00000005612	rnf44 (ENSTNIG00000005613)
Eupecaria_A	ANCESTRAL SPECIES	13	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Ballan wrasse	MODERN SPECIES	130	trim105 (ENSLBEG00000028127)	npy7r (ENSLBEG00000028119)	prelid1a (ENSLBEG00000028113)	mxd3 (ENSLBEG00000028106)	FAM193B (ENSLBEG00000028100)	DDX41 (ENSLBEG00000028087)	ENSLBEG00000028072	atoh1b (ENSLBEG00000028068)	unc5a (ENSLBEG00000028026)	pdlim7 (ENSLBEG00000027973)	CLTB (ENSLBEG00000027939)	higd2a (ENSLBEG00000027952)	ankhd1 (ENSLBEG00000027846) #20	hnrnph1 (ENSLBEG00000027811)	RUFY1 (ENSLBEG00000027799)	hbegfa (ENSLBEG00000027784) #22	rmnd5b (ENSLBEG00000027771)	ENSLBEG00000027751	ENSLBEG00000027738	anxa6 (ENSLBEG00000027708)	tnip1 (ENSLBEG00000027670)	gpx3 (ENSLBEG00000027651)	ENSLBEG00000027642	dctn4 (ENSLBEG00000027614)	SYNPO (ENSLBEG00000027583)	tspan17 (ENSLBEG00000027556)	LRRTM2 (ENSLBEG00000027545)	ctnna1 (ENSLBEG00000027527)	ENSLBEG00000027514	sncb (ENSLBEG00000027505)	ENSLBEG00000027490
Eupecaria_B	ANCESTRAL SPECIES	13	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Perciformes	ANCESTRAL SPECIES	13	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000176927	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Perciformes_a	ANCESTRAL SPECIES	11	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000176927	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Channel bull blenny	MODERN SPECIES	1	trim105 (ENSCGOG00000019963)	npy7r (ENSCGOG00000019965)	prelid1a (ENSCGOG00000019967)	mxd3 (ENSCGOG00000001265)	FAM193B (ENSCGOG00000001279)	DDX41 (ENSCGOG00000001317)	ENSCGOG00000001449	atoh1b (ENSCGOG00000001452)	unc5a (ENSCGOG00000001520)	pdlim7 (ENSCGOG00000002530)	CLTB (ENSCGOG00000002546)	higd2a (ENSCGOG00000002551)	ankhd1 (ENSCGOG00000002574) #20	hnrnph1 (ENSCGOG00000003588)	RUFY1 (ENSCGOG00000003595)	hbegfa (ENSCGOG00000003718) #22	rmnd5b (ENSCGOG00000003734)	ENSCGOG00000003970	ENSCGOG00000003982	ENSCGOG00000003993	anxa6 (ENSCGOG00000004344)	tnip1 (ENSCGOG00000009869)	gpx3 (ENSCGOG00000009880)	ENSCGOG00000009884	dctn4 (ENSCGOG00000009906)	ENSCGOG00000010162	tspan17 (ENSCGOG00000010168)	ENSCGOG00000010350	ctnna1 (ENSCGOG00000010415)	LRRTM2 (ENSCGOG00000013295)	sncb (ENSCGOG00000013298)
Pike perch	MODERN SPECIES	36	trim105 (ENSSLUG00000014742)	npy7r (ENSSLUG00000014739)	prelid1a (ENSSLUG00000014734)	mxd3 (ENSSLUG00000014717)	FAM193B (ENSSLUG00000014710)	DDX41 (ENSSLUG00000014556)	ENSSLUG00000014524	atoh1b (ENSSLUG00000014520)	unc5a (ENSSLUG00000014496)	pdlim7 (ENSSLUG00000014448)	CLTB (ENSSLUG00000014441)	higd2a (ENSSLUG00000014437)	ankhd1 (ENSSLUG00000010308) #20	hnrnph1 (ENSSLUG00000010145)	RUFY1 (ENSSLUG00000009730)	hbegfa (ENSSLUG00000009702) #22	rmnd5b (ENSSLUG00000009663)	N4BP3 (ENSSLUG00000009653)	ENSSLUG00000009648	ENSSLUG00000009640	anxa6 (ENSSLUG00000003743)	tnip1 (ENSSLUG00000003172)	ENSSLUG00000003151	gpx3 (ENSSLUG00000003136)	dctn4 (ENSSLUG00000003091)	ENSSLUG00000003064	tspan17 (ENSSLUG00000003025)	ENSSLUG00000003004	LRRTM2 (ENSSLUG00000002998)	ctnna1 (ENSSLUG00000002150)	sncb (ENSSLUG00000002043)
Cottioidei	ANCESTRAL SPECIES	9	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000176927	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00430000032979	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Lumpfish	MODERN SPECIES	1	trim105 (ENSCLMG00005017420)	npy7r (ENSCLMG00005017419)	prelid1a (ENSCLMG00005017417)	mxd3 (ENSCLMG00005017416)	FAM193B (ENSCLMG00005017413)	DDX41 (ENSCLMG00005016805)	ENSCLMG00005016798	ENSCLMG00005016795	unc5a (ENSCLMG00005016794)	pdlim7 (ENSCLMG00005016788)	CLTB (ENSCLMG00005016785)	higd2a (ENSCLMG00005016784)	ankhd1 (ENSCLMG00005014851) #20	hnrnph1 (ENSCLMG00005014806)	RUFY1 (ENSCLMG00005014533)	hbegfa (ENSCLMG00005014527) #22	rmnd5b (ENSCLMG00005014523)	N4BP3 (ENSCLMG00005014521)	ENSCLMG00005014517	ENSCLMG00005014417	anxa6 (ENSCLMG00005006546)	tnip1 (ENSCLMG00005006483)	ENSCLMG00005006482	gpx3 (ENSCLMG00005006481)	dctn4 (ENSCLMG00005006476)	ENSCLMG00005006473	tspan17 (ENSCLMG00005006461)	ENSCLMG00005006459	LRRTM2 (ENSCLMG00005006458)	ctnna1 (ENSCLMG00005004810)	sncb (ENSCLMG00005004762)
Stickleback	MODERN SPECIES	3	ergic1 (ENSGACG00000018319)	flt4 (ENSGACG00000018320)	ENSGACG00000018322	npy7r (ENSGACG00000018324)	prelid1a (ENSGACG00000018325)	mxd3 (ENSGACG00000018331)	FAM193B (ENSGACG00000018332)	DDX41 (ENSGACG00000018334)	unc5a (ENSGACG00000018337)	pdlim7 (ENSGACG00000018344)	CLTB (ENSGACG00000018348)	higd2a (ENSGACG00000018350)	ankhd1 (ENSGACG00000018351) #20	hnrnph1 (ENSGACG00000018352)	RUFY1 (ENSGACG00000018354)	hbegfa (ENSGACG00000018355) #22	rmnd5b (ENSGACG00000018357)	ENSGACG00000018359	ENSGACG00000018361	ENSGACG00000018362	anxa6 (ENSGACG00000018367)	tnip1 (ENSGACG00000018374)	ENSGACG00000018378	gpx3 (ENSGACG00000018379)	dctn4 (ENSGACG00000018383)	ENSGACG00000018384	ENSGACG00000018386	tspan17 (ENSGACG00000018387)	ENSGACG00000018390	ctnna1 (ENSGACG00000018391)	LRRTM2 (ENSGACG00000018406)
Eupecaria_C	ANCESTRAL SPECIES	12	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581	ENSGT00950000183175.B.a
European seabass	MODERN SPECIES	12	npy7r (ENSDLAG00005026907)	prelid1a (ENSDLAG00005026820)	mxd3 (ENSDLAG00005026674)	ENSDLAG00005016133	ENSDLAG00005016157	ENSDLAG00005016427	ENSDLAG00005016455	ENSDLAG00005004367	unc5a (ENSDLAG00005016486)	pdlim7 (ENSDLAG00005017181)	ENSDLAG00005017313	higd2a (ENSDLAG00005028947)	ENSDLAG00005017395 #20	hnrnph1 (ENSDLAG00005018725)	ENSDLAG00005018783	hbegfa (ENSDLAG00005018941) #22	ENSDLAG00005018952	ENSDLAG00005031151	ENSDLAG00005019061	ENSDLAG00005019072	anxa6 (ENSDLAG00005019139)	tnip1 (ENSDLAG00005020299)	gpx3 (ENSDLAG00005020322)	ENSDLAG00005020328	dctn4 (ENSDLAG00005020333)	ENSDLAG00005020369	tspan17 (ENSDLAG00005034802)	ENSDLAG00005020391	ENSDLAG00005020410	ENSDLAG00005028229	sncb (ENSDLAG00005020711)
Large yellow croaker	MODERN SPECIES		trim105 (ENSLCRG00005016241)	npy7r (ENSLCRG00005016243)	prelid1a (ENSLCRG00005016245)	mxd3 (ENSLCRG00005016246)	mxd3 (ENSLCRG00005016248)	DDX41 (ENSLCRG00005016250)	ENSLCRG00005016491	atoh1b (ENSLCRG00005016492)	unc5a (ENSLCRG00005016510)	pdlim7 (ENSLCRG00005018167)	CLTB (ENSLCRG00005018169)	higd2a (ENSLCRG00005018170)	ankhd1 (ENSLCRG00005018195) #20	hnrnph1 (ENSLCRG00005018950)	RUFY1 (ENSLCRG00005018951)	hbegfa (ENSLCRG00005018988) #22	rmnd5b (ENSLCRG00005018990)	ENSLCRG00005018999	ENSLCRG00005019002	ENSLCRG00005019005	anxa6 (ENSLCRG00005019100)	tnip1 (ENSLCRG00005021012)	gpx3 (ENSLCRG00005021020)	ENSLCRG00005021021	dctn4 (ENSLCRG00005021023)	ENSLCRG00005021027	tspan17 (ENSLCRG00005021029)	ENSLCRG00005021032	ctnna1 (ENSLCRG00005021043)	LRRTM2 (ENSLCRG00005021398)	sncb (ENSLCRG00005021399)
Gilthead seabream	MODERN SPECIES	9	trim105 (ENSSAUG00010011146)	npy7r (ENSSAUG00010011145)	prelid1a (ENSSAUG00010011141)	mxd3 (ENSSAUG00010011140)	FAM193B (ENSSAUG00010011139)	DDX41 (ENSSAUG00010010807)	ENSSAUG00010010802	ENSSAUG00010010800	unc5a (ENSSAUG00010007939)	pdlim7 (ENSSAUG00010007901)	CLTB (ENSSAUG00010007896)	higd2a (ENSSAUG00010007895)	ankhd1 (ENSSAUG00010005010) #20	hnrnph1 (ENSSAUG00010004992)	RUFY1 (ENSSAUG00010004986)	hbegfa (ENSSAUG00010004976) #22	ENSSAUG00010004975	rmnd5b (ENSSAUG00010004872)	ENSSAUG00010004861	ENSSAUG00010004858	ENSSAUG00010004759	anxa6 (ENSSAUG00010003818)	tnip1 (ENSSAUG00010003794)	gpx3 (ENSSAUG00010003792)	dctn4 (ENSSAUG00010003778)	ENSSAUG00010003776	tspan17 (ENSSAUG00010003559)	ENSSAUG00010003554	LRRTM2 (ENSSAUG00010003550)	ctnna1 (ENSSAUG00010002727)	ENSSAUG00010002690
Percomorphaceae_D	ANCESTRAL SPECIES	17	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000161724	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Anabantaria	ANCESTRAL SPECIES	15	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000161724	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Anabantoidei	ANCESTRAL SPECIES	11	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000161724	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Climbing perch	MODERN SPECIES	1	trim105 (ENSATEG00000003461)	npy7r (ENSATEG00000003437)	prelid1a (ENSATEG00000003408)	mxd3 (ENSATEG00000003387)	ENSATEG00000003379	ENSATEG00000003317	ENSATEG00000003310	atoh1b (ENSATEG00000003294)	unc5a (ENSATEG00000003142)	pdlim7 (ENSATEG00000003088)	ENSATEG00000027088	higd2a (ENSATEG00000025604)	ENSATEG00000002842 #20	hnrnph1 (ENSATEG00000002792)	ENSATEG00000002781	hbegfa (ENSATEG00000002764) #22	ENSATEG00000002728	ENSATEG00000002724	ENSATEG00000002717	ENSATEG00000002595	anxa6 (ENSATEG00000002460)	tnip1 (ENSATEG00000002394)	ENSATEG00000028801	gpx3 (ENSATEG00000002364)	dctn4 (ENSATEG00000002314)	ENSATEG00000029222	tspan17 (ENSATEG00000002265)	ENSATEG00000002252	ENSATEG00000002243	ctnna1 (ENSATEG00000002185)	sncb (ENSATEG00000002106)
Siamese fighting fish	MODERN SPECIES	1	npy7r (ENSBSLG00000009439)	prelid1a (ENSBSLG00000009431)	mxd3 (ENSBSLG00000009422)	FAM193B (ENSBSLG00000009410)	DDX41 (ENSBSLG00000009254)	ENSBSLG00000009232	ENSBSLG00000009226	unc5a (ENSBSLG00000008651)	pdlim7 (ENSBSLG00000008631)	ENSBSLG00000008586	CLTB (ENSBSLG00000008581)	higd2a (ENSBSLG00000008564)	ankhd1 (ENSBSLG00000008241) #20	hnrnph1 (ENSBSLG00000008193)	RUFY1 (ENSBSLG00000007936)	hbegfa (ENSBSLG00000007893) #22	rmnd5b (ENSBSLG00000007774)	ENSBSLG00000007720	ENSBSLG00000007643	ENSBSLG00000007638	anxa6 (ENSBSLG00000007290)	tnip1 (ENSBSLG00000007266)	gpx3 (ENSBSLG00000007261)	ENSBSLG00000007258	dctn4 (ENSBSLG00000006644)	ENSBSLG00000006014	tspan17 (ENSBSLG00000005997)	ENSBSLG00000005995	LRRTM2 (ENSBSLG00000005990)	ctnna1 (ENSBSLG00000005619)	sncb (ENSBSLG00000005521)
Zig-zag eel	MODERN SPECIES	1	trim105 (ENSMAMG00000011173)	npy7r (ENSMAMG00000011180)	prelid1a (ENSMAMG00000011186)	mxd3 (ENSMAMG00000011204)	ENSMAMG00000011229	ENSMAMG00000011237	ENSMAMG00000011265	ENSMAMG00000024670	unc5a (ENSMAMG00000011269)	pdlim7 (ENSMAMG00000011305)	ENSMAMG00000028195	higd2a (ENSMAMG00000011377)	ENSMAMG00000011409 #20	hnrnph1 (ENSMAMG00000011478)	ENSMAMG00000011501	hbegfa (ENSMAMG00000011542) #22	ENSMAMG00000011552	ENSMAMG00000011574	ENSMAMG00000026528	ENSMAMG00000011600	ENSMAMG00000011628	ENSMAMG00000026510	ENSMAMG00000011659	anxa6 (ENSMAMG00000011678)	tnip1 (ENSMAMG00000011738)	gpx3 (ENSMAMG00000011799)	ENSMAMG00000011805	dctn4 (ENSMAMG00000011819)	ENSMAMG00000025932	tspan17 (ENSMAMG00000024855)	ENSMAMG00000011896
Carangaria	ANCESTRAL SPECIES	15	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Pleuronectoidei	ANCESTRAL SPECIES	18	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Tongue sole	MODERN SPECIES	6	ENSCSEG00000015650	ENSCSEG00000015652	ENSCSEG00000015659	egr1 (ENSCSEG00000015664)	zc4h2 (ENSCSEG00000015668)	msnb (ENSCSEG00000015682)	ENSCSEG00000015724	ENSCSEG00000015744	efnb1 (ENSCSEG00000015749)	pdlim7 (ENSCSEG00000015759)	CLTB (ENSCSEG00000015791)	higd2a (ENSCSEG00000015798)	ankhd1 (ENSCSEG00000015816) #20	hnrnph1 (ENSCSEG00000015891)	RUFY1 (ENSCSEG00000015900)	hbegfa (ENSCSEG00000015923) #22	ENSCSEG00000015933	ENSCSEG00000015937	rmnd5b (ENSCSEG00000015940)	ENSCSEG00000015951	ENSCSEG00000015960	ENSCSEG00000015980	anxa6 (ENSCSEG00000015992)	tnip1 (ENSCSEG00000016018)	gpx3 (ENSCSEG00000016056)	dctn4 (ENSCSEG00000016071)	ENSCSEG00000016132	ENSCSEG00000016140	tspan17 (ENSCSEG00000016149)	ctnna1 (ENSCSEG00000016166)	ENSCSEG00000016183
Turbot	MODERN SPECIES	4	trim105 (ENSSMAG00000007114)	npy7r (ENSSMAG00000007165)	prelid1a (ENSSMAG00000023554)	mxd3 (ENSSMAG00000007189)	ENSSMAG00000007198	ENSSMAG00000007208	ENSSMAG00000007245	atoh1b (ENSSMAG00000007277)	unc5a (ENSSMAG00000007291)	ENSSMAG00000007412	ENSSMAG00000033692	ENSSMAG00000007564	ENSSMAG00000007589 #20	hnrnph1 (ENSSMAG00000007820)	ENSSMAG00000007935	hbegfa (ENSSMAG00000008006) #22	ENSSMAG00000030660	ENSSMAG00000008032	ENSSMAG00000008097	ENSSMAG00000008122	ENSSMAG00000008142	anxa6 (ENSSMAG00000008262)	tnip1 (ENSSMAG00000008360)	gpx3 (ENSSMAG00000008452)	ENSSMAG00000008468	dctn4 (ENSSMAG00000008473)	tspan17 (ENSSMAG00000008516)	ENSSMAG00000026477	ENSSMAG00000008568	ENSSMAG00000008624	sncb (ENSSMAG00000035291)
Carangaria_A	ANCESTRAL SPECIES	22	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00940000171730	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581
Seriola	ANCESTRAL SPECIES	22	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00940000171730	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581
Greater amberjack	MODERN SPECIES	67	flt4 (ENSSDUG00000008353)	trim105 (ENSSDUG00000008405)	npy7r (ENSSDUG00000008413)	prelid1a (ENSSDUG00000008415)	mxd3 (ENSSDUG00000008431)	FAM193B (ENSSDUG00000008456)	ENSSDUG00000008525	ENSSDUG00000008550	unc5a (ENSSDUG00000008567)	pdlim7 (ENSSDUG00000008618)	CLTB (ENSSDUG00000008642)	ENSSDUG00000008657	ankhd1 (ENSSDUG00000008681) #20	hnrnph1 (ENSSDUG00000008785)	RUFY1 (ENSSDUG00000008831)	hbegfa (ENSSDUG00000008906) #22	ENSSDUG00000008918	rmnd5b (ENSSDUG00000008928)	ENSSDUG00000008961	ENSSDUG00000008978	ENSSDUG00000008995	anxa6 (ENSSDUG00000009018)	tnip1 (ENSSDUG00000009074)	gpx3 (ENSSDUG00000009150)	ENSSDUG00000009159	dctn4 (ENSSDUG00000009169)	ENSSDUG00000009219	ENSSDUG00000009237	tspan17 (ENSSDUG00000009247)	ENSSDUG00000009275	ctnna1 (ENSSDUG00000009312)
Yellowtail amberjack	MODERN SPECIES	2508	npy7r (ENSSLDG00000010115)	prelid1a (ENSSLDG00000010127)	mxd3 (ENSSLDG00000010152)	FAM193B (ENSSLDG00000010207)	DDX41 (ENSSLDG00000010264)	ENSSLDG00000010322	ENSSLDG00000010345	unc5a (ENSSLDG00000010381)	pdlim7 (ENSSLDG00000010493)	ENSSLDG00000010518	CLTB (ENSSLDG00000010562)	ENSSLDG00000010607	ankhd1 (ENSSLDG00000010626) #20	hnrnph1 (ENSSLDG00000010685)	RUFY1 (ENSSLDG00000010734)	hbegfa (ENSSLDG00000010813) #22	ENSSLDG00000010846	rmnd5b (ENSSLDG00000010868)	ENSSLDG00000010899	ENSSLDG00000010921	ENSSLDG00000010944	anxa6 (ENSSLDG00000010983)	tnip1 (ENSSLDG00000011116)	gpx3 (ENSSLDG00000011208)	ENSSLDG00000011222	dctn4 (ENSSLDG00000011265)	ENSSLDG00000011351	tspan17 (ENSSLDG00000011395)
Barramundi perch	MODERN SPECIES	63	npy7r (ENSLCAG00010011133)	ENSLCAG00010011131	prelid1a (ENSLCAG00010011125)	mxd3 (ENSLCAG00010011115)	FAM193B (ENSLCAG00010011111)	DDX41 (ENSLCAG00010011053)	ENSLCAG00010011041	atoh1b (ENSLCAG00010011038)	unc5a (ENSLCAG00010010522)	pdlim7 (ENSLCAG00010010405)	CLTB (ENSLCAG00010010398)	ENSLCAG00010010394	ankhd1 (ENSLCAG00010009214) #20	hnrnph1 (ENSLCAG00010008967)	RUFY1 (ENSLCAG00010008934)	hbegfa (ENSLCAG00010008915) #22	rmnd5b (ENSLCAG00010008905)	ENSLCAG00010008899	ENSLCAG00010008895	ENSLCAG00010008891	anxa6 (ENSLCAG00010008157)	tnip1 (ENSLCAG00010007902)	ENSLCAG00010007896	gpx3 (ENSLCAG00010007895)	dctn4 (ENSLCAG00010007837)	ENSLCAG00010007809	tspan17 (ENSLCAG00010007789)	ENSLCAG00010007779	LRRTM2 (ENSLCAG00010007769)	ctnna1 (ENSLCAG00010007683)	sncb (ENSLCAG00010007635)
Ovalentaria	ANCESTRAL SPECIES	15	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Atherinomorphae	ANCESTRAL SPECIES	9	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Cyprinodontiformes	ANCESTRAL SPECIES	8	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581
Aplocheiloidei	ANCESTRAL SPECIES	25	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Turquoise killifish	MODERN SPECIES	76																HBEGFA (ENSNFUG00015016932) #22	dctn4 (ENSNFUG00015016906)
Mangrove rivulus	MODERN SPECIES	93	trim105 (ENSKMAG00000019453)	npy7r (ENSKMAG00000019448)	prelid1a (ENSKMAG00000019416)	mxd3 (ENSKMAG00000019382)	FAM193B (ENSKMAG00000019355)	DDX41 (ENSKMAG00000019331)	ENSKMAG00000019313	atoh1b (ENSKMAG00000019300)	unc5a (ENSKMAG00000019152)	pdlim7 (ENSKMAG00000019058)	CLTB (ENSKMAG00000018981)	higd2a (ENSKMAG00000018950)	ankhd1 (ENSKMAG00000018854) #20	hnrnph1 (ENSKMAG00000018802)	RUFY1 (ENSKMAG00000018750)	hbegfa (ENSKMAG00000018737) #22	rmnd5b (ENSKMAG00000018706)	ENSKMAG00000018681	ENSKMAG00000018670	ENSKMAG00000018634	anxa6 (ENSKMAG00000018517)	tnip1 (ENSKMAG00000018403)	gpx3 (ENSKMAG00000018372)	ENSKMAG00000018358	dctn4 (ENSKMAG00000018302)	ENSKMAG00000018277	tspan17 (ENSKMAG00000018252)	ENSKMAG00000018241	LRRTM2 (ENSKMAG00000018230)	ctnna1 (ENSKMAG00000018134)
Cyprinodontoidei	ANCESTRAL SPECIES	19	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581
NAME_4	ANCESTRAL SPECIES	20	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b	ENSGT00940000160581	ENSGT00950000183175.B.a
Sheepshead minnow	MODERN SPECIES	120	trim105 (ENSCVAG00000014528)	npy7r (ENSCVAG00000014513)	prelid1a (ENSCVAG00000014496)	mxd3 (ENSCVAG00000014477)	ENSCVAG00000014470	DDX41 (ENSCVAG00000014462)	ENSCVAG00000014419	atoh1b (ENSCVAG00000014395)	unc5a (ENSCVAG00000014387)	pdlim7 (ENSCVAG00000014241)	CLTB (ENSCVAG00000014221)	higd2a (ENSCVAG00000000358)	ankhd1 (ENSCVAG00000014181) #20	hnrnph1 (ENSCVAG00000014097)	ENSCVAG00000014063	hbegfa (ENSCVAG00000014015) #22	rmnd5b (ENSCVAG00000014008)	ENSCVAG00000013984	ENSCVAG00000013969	ENSCVAG00000013957	anxa6 (ENSCVAG00000013893)	tnip1 (ENSCVAG00000013753)	gpx3 (ENSCVAG00000013620)	ENSCVAG00000013610	dctn4 (ENSCVAG00000013605)	ENSCVAG00000013574	tspan17 (ENSCVAG00000013563)	ENSCVAG00000013542	ctnna1 (ENSCVAG00000013536)	LRRTM2 (ENSCVAG00000013459)	sncb (ENSCVAG00000013454)
Mummichog	MODERN SPECIES	235	trim105 (ENSFHEG00000009012)	npy7r (ENSFHEG00000008997)	prelid1a (ENSFHEG00000008983)	mxd3 (ENSFHEG00000008961)	FAM193B (ENSFHEG00000008918)	DDX41 (ENSFHEG00000008904)	ENSFHEG00000008846	atoh1b (ENSFHEG00000008835)	unc5a (ENSFHEG00000008817)	pdlim7 (ENSFHEG00000008761)	CLTB (ENSFHEG00000008702)	higd2a (ENSFHEG00000008663)	ankhd1 (ENSFHEG00000008622) #20	hnrnph1 (ENSFHEG00000008474)	RUFY1 (ENSFHEG00000008439)	hbegfa (ENSFHEG00000008338) #22	rmnd5b (ENSFHEG00000008294)	ENSFHEG00000008257	ENSFHEG00000008234	ENSFHEG00000008216	anxa6 (ENSFHEG00000008202)	tnip1 (ENSFHEG00000008101)	gpx3 (ENSFHEG00000008038)	ENSFHEG00000008035	dctn4 (ENSFHEG00000008016)	ENSFHEG00000007928	tspan17 (ENSFHEG00000007920)	ENSFHEG00000007887	ctnna1 (ENSFHEG00000007851)	LRRTM2 (ENSFHEG00000007762)	sncb (ENSFHEG00000007749)
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000176882.h.a	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Poecilia	ANCESTRAL SPECIES	21	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000176882.h.a	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
NAME_6	ANCESTRAL SPECIES	17	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000159868.a	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000176882.h.a	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581
Amazon molly	DUPLICATION
Amazon molly	MODERN SPECIES	378	npy7r (ENSPFOG00000020500)	prelid1a (ENSPFOG00000006526)	mxd3 (ENSPFOG00000006510)	FAM193B (ENSPFOG00000006296)	DDX41 (ENSPFOG00000024441)	ENSPFOG00000024519	ENSPFOG00000023785	unc5a (ENSPFOG00000005166)	pdlim7 (ENSPFOG00000004901)	CLTB (ENSPFOG00000004828)	higd2a (ENSPFOG00000004798)	ankhd1 (ENSPFOG00000004211) #20	hnrnph1 (ENSPFOG00000004097)	RUFY1 (ENSPFOG00000003790)	hbegfa (ENSPFOG00000003756) #22	hbegfa (ENSPFOG00000003738) #22	ENSPFOG00000024137	rmnd5b (ENSPFOG00000003618)	ENSPFOG00000003539	ENSPFOG00000003319	anxa6 (ENSPFOG00000002832)	tnip1 (ENSPFOG00000002568)	gpx3 (ENSPFOG00000002538)	dctn4 (ENSPFOG00000002407)	ENSPFOG00000002395	tspan17 (ENSPFOG00000002286)	ENSPFOG00000002270	LRRTM2 (ENSPFOG00000002263)	ctnna1 (ENSPFOG00000001908)	sncb (ENSPFOG00000001734)	ENSPFOG00000024419
Amazon molly	MODERN SPECIES	378	trim105 (ENSPFOG00000006575)	npy7r (ENSPFOG00000020500)	prelid1a (ENSPFOG00000006526)	mxd3 (ENSPFOG00000006510)	FAM193B (ENSPFOG00000006296)	DDX41 (ENSPFOG00000024441)	ENSPFOG00000024519	ENSPFOG00000023785	unc5a (ENSPFOG00000005166)	pdlim7 (ENSPFOG00000004901)	CLTB (ENSPFOG00000004828)	higd2a (ENSPFOG00000004798)	ankhd1 (ENSPFOG00000004211) #20	hnrnph1 (ENSPFOG00000004097)	RUFY1 (ENSPFOG00000003790)	hbegfa (ENSPFOG00000003756) #22	hbegfa (ENSPFOG00000003738) #22	ENSPFOG00000024137	rmnd5b (ENSPFOG00000003618)	ENSPFOG00000003539	ENSPFOG00000003319	anxa6 (ENSPFOG00000002832)	tnip1 (ENSPFOG00000002568)	gpx3 (ENSPFOG00000002538)	dctn4 (ENSPFOG00000002407)	ENSPFOG00000002395	tspan17 (ENSPFOG00000002286)	ENSPFOG00000002270	LRRTM2 (ENSPFOG00000002263)	ctnna1 (ENSPFOG00000001908)	sncb (ENSPFOG00000001734)
Sailfin molly	MODERN SPECIES	1309									unc5a (ENSPLAG00000011605)	pdlim7 (ENSPLAG00000011633)	CLTB (ENSPLAG00000011651)	higd2a (ENSPLAG00000011657)	ankhd1 (ENSPLAG00000011740) #20	hnrnph1 (ENSPLAG00000011771)	RUFY1 (ENSPLAG00000011836)	hbegfa (ENSPLAG00000011862) #22	ENSPLAG00000011871	ENSPLAG00000011880	rmnd5b (ENSPLAG00000011904)	ENSPLAG00000000818	ENSPLAG00000011928	ENSPLAG00000011945	anxa6 (ENSPLAG00000012065)
Guppy	MODERN SPECIES	440	trim105 (ENSPREG00000005233)	npy7r (ENSPREG00000005245)	prelid1a (ENSPREG00000005249)	mxd3 (ENSPREG00000005268)	ENSPREG00000005293	DDX41 (ENSPREG00000005321)	ENSPREG00000005373	ENSPREG00000005388	unc5a (ENSPREG00000005412)	pdlim7 (ENSPREG00000005510)	ENSPREG00000005582	higd2a (ENSPREG00000005596)	ankhd1 (ENSPREG00000005628) #20	hnrnph1 (ENSPREG00000005780)	RUFY1 (ENSPREG00000005841)	hbegfa (ENSPREG00000005917) #22	rmnd5b (ENSPREG00000005930)	N4BP3 (ENSPREG00000005960)	ENSPREG00000005994	ENSPREG00000006036	anxa6 (ENSPREG00000006058)	tnip1 (ENSPREG00000006127)	gpx3 (ENSPREG00000006217)	ENSPREG00000006230	dctn4 (ENSPREG00000006250)	ENSPREG00000006301	tspan17 (ENSPREG00000006323)	ENSPREG00000006355	ctnna1 (ENSPREG00000006377)	LRRTM2 (ENSPREG00000006483)	ENSPREG00000006496
Platyfish	MODERN SPECIES	15	trim105 (ENSXMAG00000009728)	npy7r (ENSXMAG00000019501)	prelid1a (ENSXMAG00000009733)	mxd3 (ENSXMAG00000009739)	ENSXMAG00000009756	DDX41 (ENSXMAG00000009768)	ENSXMAG00000009785	atoh1b (ENSXMAG00000009786)	unc5a (ENSXMAG00000009787)	pdlim7 (ENSXMAG00000009841)	CLTB (ENSXMAG00000009870)	higd2a (ENSXMAG00000025104)	ankhd1 (ENSXMAG00000009881) #20	hnrnph1 (ENSXMAG00000021332)	RUFY1 (ENSXMAG00000009967)	hbegf (ENSXMAG00000010006) #22	ENSXMAG00000025041	ENSXMAG00000027384	rmnd5b (ENSXMAG00000010010)	ENSXMAG00000010022	ENSXMAG00000010027	ENSXMAG00000010034	anxa6 (ENSXMAG00000010058)	tnip1 (ENSXMAG00000010088)	gpx3 (ENSXMAG00000010097)	ENSXMAG00000022008	dctn4 (ENSXMAG00000010102)	ENSXMAG00000024308	tspan17 (ENSXMAG00000010118)	ENSXMAG00000029089	ctnna1 (ENSXMAG00000010139)
Oryzias	ANCESTRAL SPECIES	17	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Oryzias_b	ANCESTRAL SPECIES	20	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Javanese ricefish	MODERN SPECIES	1	flt4 (ENSOJAG00000020995)	trim105 (ENSOJAG00000020972)	npy7r (ENSOJAG00000020965)	prelid1a (ENSOJAG00000020964)	mxd3 (ENSOJAG00000020961)	FAM193B (ENSOJAG00000020954)	DDX41 (ENSOJAG00000020811)	ENSOJAG00000020770	atoh1b (ENSOJAG00000020755)	unc5a (ENSOJAG00000019725)	pdlim7 (ENSOJAG00000019523)	CLTB (ENSOJAG00000019494)	higd2a (ENSOJAG00000019479)	ankhd1 (ENSOJAG00000016623) #20	hnrnph1 (ENSOJAG00000016417)	hbegfa (ENSOJAG00000015977) #22	rmnd5b (ENSOJAG00000015838)	ENSOJAG00000015825	ENSOJAG00000015817	ENSOJAG00000015779	anxa6 (ENSOJAG00000011614)	tnip1 (ENSOJAG00000011334)	gpx3 (ENSOJAG00000011313)	dctn4 (ENSOJAG00000011258)	ENSOJAG00000011236	tspan17 (ENSOJAG00000011117)	ENSOJAG00000011079	LRRTM2 (ENSOJAG00000011070)	ctnna1 (ENSOJAG00000010665)	ENSOJAG00000010594	sncb (ENSOJAG00000010574)
Indian medaka	MODERN SPECIES	16	trim105 (ENSOMEG00000008881)	npy7r (ENSOMEG00000008885)	prelid1a (ENSOMEG00000008895)	mxd3 (ENSOMEG00000008908)	FAM193B (ENSOMEG00000008966)	DDX41 (ENSOMEG00000009020)	ENSOMEG00000009043	atoh1b (ENSOMEG00000009058)	unc5a (ENSOMEG00000000867)	pdlim7 (ENSOMEG00000009270)	CLTB (ENSOMEG00000009354)	higd2a (ENSOMEG00000009291)	ankhd1 (ENSOMEG00000009605) #20	hnrnph1 (ENSOMEG00000009827)	ENSOMEG00000009859	hbegfa (ENSOMEG00000009883) #22	ENSOMEG00000009897	rmnd5b (ENSOMEG00000010009)	ENSOMEG00000009930	ENSOMEG00000010047	ENSOMEG00000010092	anxa6 (ENSOMEG00000010216)	tnip1 (ENSOMEG00000010443)	gpx3 (ENSOMEG00000010527)	ENSOMEG00000010553	dctn4 (ENSOMEG00000010682)	ENSOMEG00000010722	tspan17 (ENSOMEG00000010802)	ENSOMEG00000010828	LRRTM2 (ENSOMEG00000010844)	ctnna1 (ENSOMEG00000010909)
Oryzias_a	ANCESTRAL SPECIES	22	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Japanese Medaka HdrR	MODERN SPECIES	1	npy7r (ENSORLG00000006616)	prelid1a (ENSORLG00000006630)	mxd3 (ENSORLG00000006647)	FAM193B (ENSORLG00000006666)	DDX41 (ENSORLG00000006688)	ENSORLG00000027692	atoh1b (ENSORLG00000023492)	ENSORLG00000024547	unc5a (ENSORLG00000006750)	pdlim7 (ENSORLG00000006787)	CLTB (ENSORLG00000026832)	higd2a (ENSORLG00000028107)	ankhd1 (ENSORLG00000006908) #20	hnrnph1 (ENSORLG00000006932)	ENSORLG00000006965	hbegfa (ENSORLG00000006983) #22	ENSORLG00000028348	rmnd5b (ENSORLG00000006999)	ENSORLG00000007007	ENSORLG00000024802	ENSORLG00000007035	anxa6 (ENSORLG00000007058)	tnip1 (ENSORLG00000007072)	gpx3 (ENSORLG00000024375)	dctn4 (ENSORLG00000007117)	ENSORLG00000026496	tspan17 (ENSORLG00000007154)	ENSORLG00000022255	ctnna1 (ENSORLG00000007191)	LRRTM2 (ENSORLG00000007202)	sncb (ENSORLG00000007216)
Chinese medaka	MODERN SPECIES	25	trim105 (ENSOSIG00000006719)	npy7r (ENSOSIG00000006720)	prelid1a (ENSOSIG00000006721)	mxd3 (ENSOSIG00000006722)	FAM193B (ENSOSIG00000006724)	DDX41 (ENSOSIG00000006725)	ENSOSIG00000006805	atoh1b (ENSOSIG00000006807)	unc5a (ENSOSIG00000006815)	pdlim7 (ENSOSIG00000008616)	CLTB (ENSOSIG00000008617)	higd2a (ENSOSIG00000008618)	ankhd1 (ENSOSIG00000008637) #20	hnrnph1 (ENSOSIG00000015649)	RUFY1 (ENSOSIG00000015651)	hbegfa (ENSOSIG00000015705) #22	rmnd5b (ENSOSIG00000015707)	ENSOSIG00000015768	ENSOSIG00000015770	ENSOSIG00000015773	anxa6 (ENSOSIG00000015858)	tnip1 (ENSOSIG00000021227)	gpx3 (ENSOSIG00000021231)	ENSOSIG00000021232	ENSOSIG00000021235	tspan17 (ENSOSIG00000021249)	LRRTM2 (ENSOSIG00000021254)	ctnna1 (ENSOSIG00000021274)	ENSOSIG00000021306	sncb (ENSOSIG00000021312)	ENSOSIG00000021315
Ovalentaria_B	ANCESTRAL SPECIES	13	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Cichlidae	ANCESTRAL SPECIES	8	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	17	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	20	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b	ENSGT00950000183175.B.a
Haplochromini	ANCESTRAL SPECIES	14	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b.d	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT01030000234543.A.b.j.b	ENSGT00940000160581	ENSGT01030000234543.A.b.k
Burton s mouthbrooder	MODERN SPECIES	361	npy7r (ENSHBUG00000011035)	prelid1a (ENSHBUG00000011030)	mxd3 (ENSHBUG00000011006)	FAM193B (ENSHBUG00000010990)	DDX41 (ENSHBUG00000010971)	ENSHBUG00000010921	atoh1b (ENSHBUG00000010913)	unc5a (ENSHBUG00000010899)	pdlim7 (ENSHBUG00000010854)	ENSHBUG00000010820	CLTB (ENSHBUG00000010710)	higd2a (ENSHBUG00000010684)	ankhd1 (ENSHBUG00000000282) #20	hnrnph1 (ENSHBUG00000010547)	ENSHBUG00000010518	hbegfa (ENSHBUG00000010488) #22	rmnd5b (ENSHBUG00000010470)	ENSHBUG00000010430	ENSHBUG00000001147	stmn1a (ENSHBUG00000000273)	ENSHBUG00000010314	serinc2 (ENSHBUG00000010299)	ENSHBUG00000010274	edn2 (ENSHBUG00000010259)	ENSHBUG00000010249	ENSHBUG00000010182	tent5bb (ENSHBUG00000010176)	zdhhc18b (ENSHBUG00000010164)	ENSHBUG00000010116	nudc (ENSHBUG00000010093)	tbxta (ENSHBUG00000010042)
Haplochromini_A	ANCESTRAL SPECIES	13	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b.d	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b.k	ENSGT00950000183175.B.a
P. nyererei	MODERN SPECIES	296	trim105 (ENSPNYG00000000217)	npy7r (ENSPNYG00000000216)	prelid1a (ENSPNYG00000000215)	mxd3 (ENSPNYG00000000214)	FAM193B (ENSPNYG00000000213)	DDX41 (ENSPNYG00000000212)	ENSPNYG00000000211	atoh1b (ENSPNYG00000000210)	unc5a (ENSPNYG00000000209)	pdlim7 (ENSPNYG00000000208)	CLTB (ENSPNYG00000000207)	higd2a (ENSPNYG00000000206)	ankhd1 (ENSPNYG00000000205) #20	hnrnph1 (ENSPNYG00000000204)	RUFY1 (ENSPNYG00000000203)	hbegfa (ENSPNYG00000000202) #22	rmnd5b (ENSPNYG00000000201)	N4BP3 (ENSPNYG00000000200)	ENSPNYG00000000199	ENSPNYG00000000198	anxa6 (ENSPNYG00000000197)	tnip1 (ENSPNYG00000000196)	ENSPNYG00000000195	gpx3 (ENSPNYG00000000194)	dctn4 (ENSPNYG00000000193)	ENSPNYG00000000191	tspan17 (ENSPNYG00000000190)	ENSPNYG00000000189	LRRTM2 (ENSPNYG00000000188)	ctnna1 (ENSPNYG00000000187)	sncb (ENSPNYG00000000186)
Haplochromini_B	ANCESTRAL SPECIES	7	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b.d	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b.k	ENSGT00950000183175.B.a
Zebra mbuna	MODERN SPECIES	1102	trim105 (ENSMZEG00005010044)	npy7r (ENSMZEG00005010036)	prelid1a (ENSMZEG00005010026)	mxd3 (ENSMZEG00005010016)	FAM193B (ENSMZEG00005010005)	DDX41 (ENSMZEG00005009983)	ENSMZEG00005009973	atoh1b (ENSMZEG00005009968)	unc5a (ENSMZEG00005009891)	pdlim7 (ENSMZEG00005009862)	ENSMZEG00005009854	higd2a (ENSMZEG00005009838)	ankhd1 (ENSMZEG00005009811) #20	hnrnph1 (ENSMZEG00005009791)	ENSMZEG00005009778	hbegfa (ENSMZEG00005009751) #22	rmnd5b (ENSMZEG00005009722)	ENSMZEG00005009663	ENSMZEG00005009642	ENSMZEG00005009590	anxa6 (ENSMZEG00005009473)	tnip1 (ENSMZEG00005009415)	ENSMZEG00005009400	gpx3 (ENSMZEG00005009390)	ENSMZEG00005009384	dctn4 (ENSMZEG00005009353)	ENSMZEG00005009320	tspan17 (ENSMZEG00005009299)	ENSMZEG00005009289	LRRTM2 (ENSMZEG00005009286)	ctnna1 (ENSMZEG00005009239)
Eastern happy	MODERN SPECIES	11	trim105 (ENSACLG00000003882)	npy7r (ENSACLG00000003870)	prelid1a (ENSACLG00000003859)	mxd3 (ENSACLG00000003842)	FAM193B (ENSACLG00000003837)	DDX41 (ENSACLG00000003778)	atoh1b (ENSACLG00000003764)	ENSACLG00000003756	unc5a (ENSACLG00000003671)	pdlim7 (ENSACLG00000003571)	ENSACLG00000003498	higd2a (ENSACLG00000003550)	ankhd1 (ENSACLG00000003424) #20	hnrnph1 (ENSACLG00000003313)	RUFY1 (ENSACLG00000002968)	hbegfa (ENSACLG00000002916) #22	rmnd5b (ENSACLG00000002881)	ENSACLG00000002865	ENSACLG00000002858	ENSACLG00000002850	ENSACLG00000002831	anxa6 (ENSACLG00000002593)	tnip1 (ENSACLG00000002522)	gpx3 (ENSACLG00000002510)	ENSACLG00000002501	dctn4 (ENSACLG00000002452)	ENSACLG00000002429	tspan17 (ENSACLG00000002406)	ENSACLG00000002395	LRRTM2 (ENSACLG00000002386)	ctnna1 (ENSACLG00000002300)
Lyretail cichlid	MODERN SPECIES	292	trim105 (ENSNBRG00000014950)	npy7r (ENSNBRG00000014979)	prelid1a (ENSNBRG00000014993)	mxd3 (ENSNBRG00000015021)	FAM193B (ENSNBRG00000015048)	DDX41 (ENSNBRG00000015087)	ENSNBRG00000015156	atoh1b (ENSNBRG00000015217)	unc5a (ENSNBRG00000015241)	pdlim7 (ENSNBRG00000015288)	CLTB (ENSNBRG00000015327)	higd2a (ENSNBRG00000015357)	ankhd1 (ENSNBRG00000015367) #20	hnrnph1 (ENSNBRG00000015406)	RUFY1 (ENSNBRG00000015430)	hbegfa (ENSNBRG00000015479) #22	rmnd5b (ENSNBRG00000015526)	ENSNBRG00000015560	ENSNBRG00000015615	anxa6 (ENSNBRG00000015788)	tnip1 (ENSNBRG00000015845)	gpx3 (ENSNBRG00000015851)	ENSNBRG00000015858	dctn4 (ENSNBRG00000015879)	ENSNBRG00000015922	tspan17 (ENSNBRG00000015932)	ENSNBRG00000015951	ctnna1 (ENSNBRG00000015964)	LRRTM2 (ENSNBRG00000016008)	sncb (ENSNBRG00000016025)	ENSNBRG00000016089
Nile tilapia	MODERN SPECIES	11	flt4 (ENSONIG00000017793)	trim105 (ENSONIG00000030479)	npy7r (ENSONIG00000036842)	prelid1 (ENSONIG00000041198)	mxd3 (ENSONIG00000017790)	FAM193B (ENSONIG00000017786)	DDX41 (ENSONIG00000017785)	ENSONIG00000041811	atoh1b (ENSONIG00000029888)	pdlim7 (ENSONIG00000017769)	cltb (ENSONIG00000040835)	higd2a (ENSONIG00000017764)	ankhd1 (ENSONIG00000017757) #20	hnrnph1 (ENSONIG00000017754)	RUFY1 (ENSONIG00000017751)	hbegfa (ENSONIG00000017750) #22	rmnd5b (ENSONIG00000017747)	ENSONIG00000017744	ENSONIG00000017741	ENSONIG00000017738	ENSONIG00000027202	anxa6 (ENSONIG00000017726)	tnip1 (ENSONIG00000017720)	gpx3 (ENSONIG00000017717)	ENSONIG00000030992	dctn4 (ENSONIG00000017715)	ENSONIG00000036117	tspan17 (ENSONIG00000017712)	ENSONIG00000017711	ctnna1 (ENSONIG00000017702)	LRRTM2 (ENSONIG00000017710)
Midas cichlid	MODERN SPECIES	974	trim105 (ENSACIG00000008524)	npy7r (ENSACIG00000008545)	prelid1a (ENSACIG00000008556)	mxd3 (ENSACIG00000008570)	FAM193B (ENSACIG00000008587)	DDX41 (ENSACIG00000008618)	ENSACIG00000008649	atoh1b (ENSACIG00000008682)	unc5a (ENSACIG00000008690)	pdlim7 (ENSACIG00000008725)	CLTB (ENSACIG00000008807)	higd2a (ENSACIG00000008824)	ankhd1 (ENSACIG00000008876) #20	hnrnph1 (ENSACIG00000008964)	RUFY1 (ENSACIG00000008984)	hbegfa (ENSACIG00000009024) #22	rmnd5b (ENSACIG00000009046)	ENSACIG00000009087	ENSACIG00000009190	ENSACIG00000009233	anxa6 (ENSACIG00000009263)	tnip1 (ENSACIG00000009316)	gpx3 (ENSACIG00000009348)	ENSACIG00000009360	dctn4 (ENSACIG00000009369)	ENSACIG00000009409	tspan17 (ENSACIG00000009426)	ENSACIG00000009444	ctnna1 (ENSACIG00000009495)	LRRTM2 (ENSACIG00000009545)
Pomacentridae	ANCESTRAL SPECIES	4	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Pomacentridae_A	ANCESTRAL SPECIES	17	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Amphiprion	ANCESTRAL SPECIES	26	ENSGT00940000164374.B.c.a	ENSGT00940000155973.a	ENSGT00950000182810.B.a	ENSGT00940000161050	ENSGT00390000000973.a.a	ENSGT00940000156333	ENSGT00940000155980.C	ENSGT00940000160064.a.b	ENSGT00950000182815.a.a.a.a.b	ENSGT00940000159626	ENSGT00940000160186	ENSGT00910000144291	ENSGT00940000153768.b #20	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT01030000235267	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00390000017153.b	ENSGT00940000164978.a	ENSGT00940000158770	ENSGT00510000046908.a.a.a	ENSGT00940000165034	ENSGT00940000176927	ENSGT00390000006954	ENSGT00950000183054.a.a.b	ENSGT00940000155429.b	ENSGT00940000166166	ENSGT00940000160581	ENSGT01030000234543.A.b
Clown anemonefish	MODERN SPECIES	1662													ankhd1 (ENSAOCG00000008358) #20	hnrnph1 (ENSAOCG00000008372)	RUFY1 (ENSAOCG00000008427)	hbegfa (ENSAOCG00000008465) #22	ENSAOCG00000008485	rmnd5b (ENSAOCG00000008520)	ENSAOCG00000008535	ENSAOCG00000008559	ENSAOCG00000008574	anxa6 (ENSAOCG00000008693)	tnip1 (ENSAOCG00000008774)	gpx3 (ENSAOCG00000008786)	ENSAOCG00000008801	dctn4 (ENSAOCG00000008870)	ENSAOCG00000008904	tspan17 (ENSAOCG00000008944)	ENSAOCG00000008960	LRRTM2 (ENSAOCG00000008969)	ctnna1 (ENSAOCG00000009045)
Orange clownfish	MODERN SPECIES	4	trim105 (ENSAPEG00000013549)	npy7r (ENSAPEG00000013537)	prelid1a (ENSAPEG00000013512)	mxd3 (ENSAPEG00000013485)	FAM193B (ENSAPEG00000013477)	DDX41 (ENSAPEG00000013433)	ENSAPEG00000013408	atoh1b (ENSAPEG00000013386)	unc5a (ENSAPEG00000013280)	pdlim7 (ENSAPEG00000013246)	CLTB (ENSAPEG00000013200)	higd2a (ENSAPEG00000013185)	ankhd1 (ENSAPEG00000013033) #20	hnrnph1 (ENSAPEG00000012980)	RUFY1 (ENSAPEG00000012922)	hbegfa (ENSAPEG00000012887) #22	rmnd5b (ENSAPEG00000012852)	ENSAPEG00000012841	ENSAPEG00000012833	ENSAPEG00000012741	anxa6 (ENSAPEG00000012610)	tnip1 (ENSAPEG00000012538)	gpx3 (ENSAPEG00000012468)	ENSAPEG00000012456	dctn4 (ENSAPEG00000012392)	ENSAPEG00000012363	tspan17 (ENSAPEG00000012330)	ENSAPEG00000012324	LRRTM2 (ENSAPEG00000012313)	ctnna1 (ENSAPEG00000012214)	sncb (ENSAPEG00000012168)
Spiny chromis	MODERN SPECIES	12	npy7r (ENSAPOG00000015930)	prelid1a (ENSAPOG00000015953)	mxd3 (ENSAPOG00000015994)	FAM193B (ENSAPOG00000016002)	DDX41 (ENSAPOG00000000935)	atoh1b (ENSAPOG00000016089)	ENSAPOG00000016128	unc5a (ENSAPOG00000016210)	pdlim7 (ENSAPOG00000016285)	CLTB (ENSAPOG00000016343)	higd2a (ENSAPOG00000016367)	ENSAPOG00000016477 #20	ankhd1 (ENSAPOG00000016571) #20	hnrnph1 (ENSAPOG00000016614)	RUFY1 (ENSAPOG00000016622)	hbegfa (ENSAPOG00000016648) #22	rmnd5b (ENSAPOG00000016705)	ENSAPOG00000016718	ENSAPOG00000016728	ENSAPOG00000016733	anxa6 (ENSAPOG00000016855)	ENSAPOG00000016878	tnip1 (ENSAPOG00000016961)	gpx3 (ENSAPOG00000016884)	dctn4 (ENSAPOG00000017057)	ENSAPOG00000017079	tspan17 (ENSAPOG00000017132)	ENSAPOG00000017147
Bicolor damselfish	MODERN SPECIES	1099						VIPR2 (ENSSPAG00000009631)	ENSSPAG00000009653	ARMC1 (ENSSPAG00000009664)	CYP7B1 (ENSSPAG00000009686)	pdlim7 (ENSSPAG00000009707)	CLTB (ENSSPAG00000009763)	higd2a (ENSSPAG00000009832)	ankhd1 (ENSSPAG00000009845) #20	hnrnph1 (ENSSPAG00000009921)	RUFY1 (ENSSPAG00000009944)	hbegfa (ENSSPAG00000010024) #22	rmnd5b (ENSSPAG00000010067)	ENSSPAG00000010088
Pinecone sodierfish	MODERN SPECIES	1	trim105 (ENSMMDG00005024294)	npy7r (ENSMMDG00005024291)	prelid1a (ENSMMDG00005024288)	mxd3 (ENSMMDG00005024285)	FAM193B (ENSMMDG00005024282)	DDX41 (ENSMMDG00005024250)	ENSMMDG00005024246	atoh1b (ENSMMDG00005024245)	unc5a (ENSMMDG00005024232)	pdlim7 (ENSMMDG00005024222)	CLTB (ENSMMDG00005024220)	higd2a (ENSMMDG00005024219)	ankhd1 (ENSMMDG00005023547) #20	hnrnph1 (ENSMMDG00005023473)	RUFY1 (ENSMMDG00005023383)	hbegfa (ENSMMDG00005023353) #22	ENSMMDG00005023349	rmnd5b (ENSMMDG00005023329)	N4BP3 (ENSMMDG00005023322)	ENSMMDG00005023320	ENSMMDG00005023313	anxa6 (ENSMMDG00005023285)	tnip1 (ENSMMDG00005023277)	gpx3 (ENSMMDG00005023271)	dctn4 (ENSMMDG00005023260)	SYNPO (ENSMMDG00005023223)	tspan17 (ENSMMDG00005023219)	ENSMMDG00005023215	LRRTM2 (ENSMMDG00005023208)	ctnna1 (ENSMMDG00005022843)	sncb (ENSMMDG00005022825)
Osteoglossiformes	ANCESTRAL SPECIES	23	ENSGT00550000074939	ENSGT00940000164576.b.a.a	ENSGT00940000157840.b	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a	ENSGT00440000033329.a.a.a	ENSGT00940000165241	ENSGT00940000158850	ENSGT00500000044831.a.a.b.a	ENSGT00390000007135	ENSGT01030000234566.e.b.a.b.c.a	ENSGT00940000165340	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d #22	ENSGT00940000168499	ENSGT00390000002292.b	ENSGT00940000159591	ENSGT00940000159349	ENSGT00940000157139	ENSGT00940000157692	ENSGT00940000157213	ENSGT00940000156944.a.b	ENSGT00940000161609.i.a	ENSGT00940000163509.a.a.b	ENSGT00940000163509.a.a.a	ENSGT00940000163509.b	ENSGT00940000165075.a.b	ENSGT00940000160001	ENSGT00940000158095
Asian bonytongue	MODERN SPECIES	4	ENSSFOG00015016865	WNT8A (ENSSFOG00015016952)	ENSSFOG00015027769	gria1a (ENSSFOG00015016777)	ENSSFOG00015016829	ENSSFOG00015027125	ENSSFOG00015016730	itk (ENSSFOG00015016656)	cyfip2 (ENSSFOG00015016583)	hmmr (ENSSFOG00015016534)	TENM2 (ENSSFOG00015016477)	zgc:165573 (ENSSFOG00015030527)	ANKHD1 (ENSSFOG00015016145) #20	ENSSFOG00015016055	RUFY1 (ENSSFOG00015015996)	hbegfa (ENSSFOG00015015980) #22	ENSSFOG00015015959	slu7 (ENSSFOG00015015923)	C1QTNF2 (ENSSFOG00015015908)	ccnjl (ENSSFOG00015030591)	fabp6 (ENSSFOG00015015890)	ENSSFOG00015032947	ttc1 (ENSSFOG00015015867)	ADRA1B (ENSSFOG00015015861)	ENSSFOG00015015846	ENSSFOG00015015831	ENSSFOG00015015816	ENSSFOG00015027724	egr1 (ENSSFOG00015015796)	reep2 (ENSSFOG00015015755)	KDM3B (ENSSFOG00015015724)
P. kingsleyae	MODERN SPECIES	289			ENSPKIG00000010014	pdgfrb (ENSPKIG00000009936)	csf1ra (ENSPKIG00000009778)	ENSPKIG00000009721	HMGXB3 (ENSPKIG00000009686)	APBB3 (ENSPKIG00000009659) #18	ENSPKIG00000009643 #16	SLC35A4 (ENSPKIG00000009634)	ENSPKIG00000009624	cd74a (ENSPKIG00000009604)	rps14 (ENSPKIG00000009582)	hnrnph1 (ENSPKIG00000009532)	RUFY1 (ENSPKIG00000009483)	hbegfa (ENSPKIG00000009462) #22	ENSPKIG00000009446	C1QTNF2 (ENSPKIG00000009423)	slu7 (ENSPKIG00000009367)	ccnjl (ENSPKIG00000009322)	fabp6 (ENSPKIG00000009298)	ENSPKIG00000009270	ttc1 (ENSPKIG00000009242)	adra1bb (ENSPKIG00000009231)	ENSPKIG00000009203	ENSPKIG00000009186	ENSPKIG00000009166	egr1 (ENSPKIG00000009152)	reep2 (ENSPKIG00000009137)	ENSPKIG00000008992	spon2a (ENSPKIG00000008917)
Spotted gar	MODERN SPECIES	672	cnot8 (ENSLOCG00000012411)	FAM114A2 (ENSLOCG00000012416)	MFAP3 (ENSLOCG00000012425)	GALNT10 (ENSLOCG00000012431)	sap30l (ENSLOCG00000012440)	HAND1 (ENSLOCG00000012444)	zgc:56585 (ENSLOCG00000012451)	LARP1 (ENSLOCG00000012457)	faxdc2 (ENSLOCG00000012471)	mat2b (ENSLOCG00000012478)	ankhd1 (ENSLOCG00000012482) #20	eif4ebp3 (ENSLOCG00000012500)	zgc:110540 (ENSLOCG00000012501)	hnrnph1 (ENSLOCG00000012510)	ENSLOCG00000012518	hbegfa (ENSLOCG00000012524) #22	pfdn1 (ENSLOCG00000012528) #23	ENSLOCG00000012533 #37	ENSLOCG00000012539 #37	ENSLOCG00000012544	dnajc18 (ENSLOCG00000012551)	ENSLOCG00000012559	ENSLOCG00000012564	sting1 (ENSLOCG00000012569) #30	ppp3ca (ENSLOCG00000012574)	ENSLOCG00000012593	ENSLOCG00000012597 ##29	zgc:110843 (ENSLOCG00000012606)	CXXC5 (ENSLOCG00000012610) #28	zgc:100829 (ENSLOCG00000012612)	PSD2 (ENSLOCG00000012621) #27
Reedfish	MODERN SPECIES	2	EPN2 (ENSECRG00000009619)	b9d1 (ENSECRG00000009604)	CACNA1H (ENSECRG00000009453)	pigq (ENSECRG00000009374)	eef2kmt (ENSECRG00000009360)	vps35l (ENSECRG00000009323)	ENSECRG00000009308	ENSECRG00000009286	gprc5bb (ENSECRG00000009272)	ENSECRG00000009261	ENSECRG00000009216	SLC4A9 (ENSECRG00000009194) #21	zgc:110540 (ENSECRG00000009171)	hnrnph1 (ENSECRG00000009154)	ENSECRG00000022655	hbegfa (ENSECRG00000022648) #22	pfdn1 (ENSECRG00000022639) #23	zgc:165573 (ENSECRG00000022627)	puraa (ENSECRG00000022622)	ENSECRG00000022607	FAM193B (ENSECRG00000022596)	DDX41 (ENSECRG00000022574)	ENSECRG00000022563	atoh1b (ENSECRG00000022558)	ENSECRG00000022553	ENSECRG00000022549	unc5a (ENSECRG00000022514)	ENSECRG00000022484	ENSECRG00000022478	faf2 (ENSECRG00000022441)	rnf44 (ENSECRG00000022403)
Elephant shark	MODERN SPECIES	1629	PWWP2A (ENSCMIG00000007716)	ttc1 (ENSCMIG00000007711)	ENSCMIG00000007707	adra1bb (ENSCMIG00000007704)	LRRTM2 (ENSCMIG00000007702)	ctnna1 (ENSCMIG00000007550)	ENSCMIG00000007481	PANK3 (ENSCMIG00000007478)	ENSCMIG00000007342	EIF4EBP3 (ENSCMIG00000007263)	ankhd1 (ENSCMIG00000006825) #20	ENSCMIG00000006627	zgc:110540 (ENSCMIG00000006622)	HNRNPH1 (ENSCMIG00000006606)	RUFY1 (ENSCMIG00000006585)	ENSCMIG00000006579 #22	pfdn1 (ENSCMIG00000006577) #23	cystm1 (ENSCMIG00000006567)	ENSCMIG00000006563	ENSCMIG00000006561 #26	ENSCMIG00000006560 #26	ENSCMIG00000006528 #27	ENSCMIG00000006515	CXXC5 (ENSCMIG00000006512) #28