Euteleostomi	ANCESTRAL SPECIES	217												ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000015368.a.a	ENSGT00940000162806	ENSGT00940000164492	ENSGT00940000158959.b	ENSGT00940000160620	ENSGT00940000164804	ENSGT00940000157050	ENSGT00940000157166
Sarcopterygii	ANCESTRAL SPECIES	22											ENSGT00940000159994	ENSGT00390000000427 #20	ENSGT00950000182983.B.a.a	ENSGT00940000157375 #21	ENSGT00940000156845	ENSGT00940000155404 #22	ENSGT00940000165800	ENSGT00940000162150	ENSGT00940000156470	ENSGT00940000159179	ENSGT00940000154587.a.b	ENSGT01050000244898.a.a.a.a	ENSGT00550000075067	ENSGT00390000013515	ENSGT00390000005235	ENSGT00720000108823	ENSGT00390000006337	ENSGT00940000159808	ENSGT01030000234564.a.a.b.b	ENSGT00940000157066	ENSGT00940000164500
Tetrapoda	ANCESTRAL SPECIES	116	ENSGT00940000155438.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994
Amniota	ANCESTRAL SPECIES	23	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285
Mammalia	ANCESTRAL SPECIES	64	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000162948 #18	ENSGT00950000183036.b #17	ENSGT00940000159130 #16	ENSGT00950000182975.a.b #15	ENSGT00550000075140 #14	ENSGT00390000016884 #12	ENSGT00940000162025 #11	ENSGT00940000160045 #13	ENSGT00390000016177	ENSGT00940000162906.c.b
Theria	ANCESTRAL SPECIES	48																ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000162948 #18	ENSGT00950000183036.b #17	ENSGT00940000159130 #16	ENSGT00950000182975.a.b #15	ENSGT00550000075140 #14	ENSGT00390000016884 #12	ENSGT00940000162025 #11	ENSGT00940000160045 #13	ENSGT00390000016177.e	ENSGT00390000007959 #9	ENSGT00390000000976 #8
Eutheria	ANCESTRAL SPECIES	27	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000162532	ENSGT00940000162241	ENSGT00390000003354	ENSGT00990000205479	ENSGT00390000001945	ENSGT00640000091578	ENSGT00940000159148	ENSGT00940000162394	ENSGT00940000155412.b	ENSGT00940000164135	ENSGT00390000005065	ENSGT00940000160969	ENSGT00530000064158	ENSGT01030000234518.C.a.a	ENSGT00510000047802
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000164486	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Primates	ANCESTRAL SPECIES	18	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Macaca	ANCESTRAL SPECIES	24	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00860000134868 #10	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00390000002019 #27	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00860000134868 #10	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130.s #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.g #25	ENSGT00950000183005.b.c.b.h #26	ENSGT00390000002019 #27	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573
Rhesus	MODERN SPECIES	10	FCER2 (ENSMMUG00000043304) #7	TRAPPC5 (ENSMMUG00000040778) #8	MCEMP1 (ENSMMUG00000012535) #9	RETN (ENSMMUG00000050184) #10	PCP2 (ENSMMUG00000060224) #11	PET100 (ENSMMUG00000028905) #12	STXBP2 (ENSMMUG00000022041) #13	XAB2 (ENSMMUG00000009539) #14	CAMSAP3 (ENSMMUG00000009540) #15	PNPLA6 (ENSMMUG00000011392) #16	MCOLN1 (ENSMMUG00000011389) #17	ZNF358 (ENSMMUG00000060429) #18	TEX45 (ENSMMUG00000057890) #19	PEX11G (ENSMMUG00000055237) #20	ARHGEF18 (ENSMMUG00000028906) #21	INSR (ENSMMUG00000028907) #22	ENSMMUG00000057682 #23	ZNF557 (ENSMMUG00000019966) #24	ENSMMUG00000028908 #25	ENSMMUG00000063988 #26	ENSMMUG00000005589 #27	ADGRE1 (ENSMMUG00000001220) #28	VAV1 (ENSMMUG00000019314) #29	SH2D3A (ENSMMUG00000008699) #30	TRIP10 (ENSMMUG00000008697) #31	ENSMMUG00000008695 #32	C3 (ENSMMUG00000008693) #33	TNFSF14 (ENSMMUG00000051945) #34	CD70 (ENSMMUG00000011042) #35	TNFSF9 (ENSMMUG00000001985) #36	TUBB4A (ENSMMUG00000014216) #37
Crab-eating macaque	MODERN SPECIES	10	MCEMP1 (ENSMFAG00000035681) #9	ENSMFAG00000038721 #10	STXBP2 (ENSMFAG00000044292) #13	PCP2 (ENSMFAG00000039571) #11	PET100 (ENSMFAG00000039399) #12	XAB2 (ENSMFAG00000029553) #14	ENSMFAG00000053330 #16	ENSMFAG00000001000 ##16	MCOLN1 (ENSMFAG00000001725) #17	ZNF358 (ENSMFAG00000048715) #18	TEX45 (ENSMFAG00000001714) #19	PEX11G (ENSMFAG00000032881) #20	ENSMFAG00000051122	ENSMFAG00000064817	ENSMFAG00000042620	INSR (ENSMFAG00000041609) #22	ZNF557 (ENSMFAG00000039721) #24	ENSMFAG00000036004 #25	ENSMFAG00000064065	ADGRE1 (ENSMFAG00000039564) #28	VAV1 (ENSMFAG00000039752) #29	SH2D3A (ENSMFAG00000002801) #30	TRIP10 (ENSMFAG00000039732) #31	GPR108 (ENSMFAG00000038700) #32	ENSMFAG00000044731 #33	TNFSF14 (ENSMFAG00000003750) #34	CD70 (ENSMFAG00000041094) #35	TUBB4A (ENSMFAG00000059050) #37	CRB3 (ENSMFAG00000040330)	DENND1C (ENSMFAG00000031978)	SLC25A23 (ENSMFAG00000039503)
Pig-tailed macaque	MODERN SPECIES	76	FCER2 (ENSMNEG00000035318) #7	MCEMP1 (ENSMNEG00000018128) #9	ENSMNEG00000030984 #10	STXBP2 (ENSMNEG00000034975) #13	PCP2 (ENSMNEG00000037941) #11	PET100 (ENSMNEG00000041764) #12	XAB2 (ENSMNEG00000033323) #14	CAMSAP3 (ENSMNEG00000028525) #15	PNPLA6 (ENSMNEG00000033457) #16	MCOLN1 (ENSMNEG00000026970) #17	ZNF358 (ENSMNEG00000037571) #18	TEX45 (ENSMNEG00000019465) #19	PEX11G (ENSMNEG00000038753) #20	ARHGEF18 (ENSMNEG00000007782) #21	ENSMNEG00000033125	INSR (ENSMNEG00000022660) #22	ZNF557 (ENSMNEG00000031152) #24	ENSMNEG00000029978 #25	ENSMNEG00000023531	ENSMNEG00000018748 #27	ADGRE1 (ENSMNEG00000036876) #28	VAV1 (ENSMNEG00000033569) #29	SH2D3A (ENSMNEG00000043229) #30	TRIP10 (ENSMNEG00000032693) #31	ENSMNEG00000027173 #32	C3 (ENSMNEG00000039015) #33	TNFSF14 (ENSMNEG00000041885) #34	CD70 (ENSMNEG00000032223) #35	TNFSF9 (ENSMNEG00000032348) #36	TUBB4A (ENSMNEG00000038280) #37	DENND1C (ENSMNEG00000029798)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Olive baboon	MODERN SPECIES	12	FCER2 (ENSPANG00000034142) #7	TRAPPC5 (ENSPANG00000038853) #8	MCEMP1 (ENSPANG00000047630) #9	RETN (ENSPANG00000003097)	STXBP2 (ENSPANG00000007766) #13	PCP2 (ENSPANG00000007002) #11	ENSPANG00000034394 #12	XAB2 (ENSPANG00000023955) #14	CAMSAP3 (ENSPANG00000014996) #15	PNPLA6 (ENSPANG00000023738) #16	MCOLN1 (ENSPANG00000011365) #17	ZNF358 (ENSPANG00000013776) #18	TEX45 (ENSPANG00000026429) #19	PEX11G (ENSPANG00000011045) #20	ARHGEF18 (ENSPANG00000013226) #21	INSR (ENSPANG00000022952) #22	ZNF557 (ENSPANG00000045372) #24	ENSPANG00000044744 #25	ADGRE1 (ENSPANG00000000239) #28	VAV1 (ENSPANG00000007768) #29	SH2D3A (ENSPANG00000013778) #30	TRIP10 (ENSPANG00000005035) #31	GPR108 (ENSPANG00000022720) #32	TNFSF14 (ENSPANG00000030479) #34	CD70 (ENSPANG00000000880) #35	TNFSF9 (ENSPANG00000051412) #36	TUBB4A (ENSPANG00000006306) #37	DENND1C (ENSPANG00000004918)	CRB3 (ENSPANG00000003084)	SLC25A23 (ENSPANG00000008553)	PSPN (ENSPANG00000030010)
Cercopithecinae_d	ANCESTRAL SPECIES	145	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25
Sooty mangabey	MODERN SPECIES	142	FCER2 (ENSCATG00000030023) #7	MCEMP1 (ENSCATG00000043601) #9	RETN (ENSCATG00000037561)	STXBP2 (ENSCATG00000044986) #13	PCP2 (ENSCATG00000036963) #11	PET100 (ENSCATG00000042884) #12	XAB2 (ENSCATG00000031163) #14	CAMSAP3 (ENSCATG00000025712) #15	PNPLA6 (ENSCATG00000034460) #16	MCOLN1 (ENSCATG00000040849) #17	ZNF358 (ENSCATG00000038779) #18	TEX45 (ENSCATG00000029598) #19	PEX11G (ENSCATG00000041793) #20	ARHGEF18 (ENSCATG00000040271) #21	ENSCATG00000013753	INSR (ENSCATG00000022887) #22	ZNF557 (ENSCATG00000038477) #24	ENSCATG00000022916
Drill	MODERN SPECIES	841	FCER2 (ENSMLEG00000037272) #7	ENSMLEG00000027715 #8	MCEMP1 (ENSMLEG00000013940) #9	RETN (ENSMLEG00000037785)	STXBP2 (ENSMLEG00000038810) #13	PCP2 (ENSMLEG00000013292) #11	PET100 (ENSMLEG00000044132) #12	XAB2 (ENSMLEG00000037177) #14	ENSMLEG00000032663 #15	PNPLA6 (ENSMLEG00000041120) #16	MCOLN1 (ENSMLEG00000005720) #17	TEX45 (ENSMLEG00000028485) #19	PEX11G (ENSMLEG00000043867) #20	ARHGEF18 (ENSMLEG00000039021) #21	ENSMLEG00000031599	INSR (ENSMLEG00000032885) #22	ZNF557 (ENSMLEG00000040833) #24	ENSMLEG00000041236 #25	ENSMLEG00000004029 #25
Vervet Monkey	MODERN SPECIES	25	FCER2 (ENSCSAG00000008317) #7	TRAPPC5 (ENSCSAG00000018827) #8	MCEMP1 (ENSCSAG00000008321) #9	RETN (ENSCSAG00000008325)	STXBP2 (ENSCSAG00000008335) #13	PET100 (ENSCSAG00000008342) #12	PCP2 (ENSCSAG00000008348) #11	XAB2 (ENSCSAG00000008362) #14	CAMSAP3 (ENSCSAG00000008442) #15	PNPLA6 (ENSCSAG00000008640) #16	MCOLN1 (ENSCSAG00000008759) #17	ZNF358 (ENSCSAG00000018826) #18	TEX45 (ENSCSAG00000008787) #19	PEX11G (ENSCSAG00000008804) #20	ARHGEF18 (ENSCSAG00000008824) #21	INSR (ENSCSAG00000008965) #22	ZNF557 (ENSCSAG00000009087) #24	ENSCSAG00000009106 #25	ENSCSAG00000018825 #27	ADGRE1 (ENSCSAG00000009172) #28	VAV1 (ENSCSAG00000009214) #29	SH2D3A (ENSCSAG00000009225) #30	TRIP10 (ENSCSAG00000009241) #31	GPR108 (ENSCSAG00000009304) #32	C3 (ENSCSAG00000009476) #33	TNFSF14 (ENSCSAG00000009528) #34	CD70 (ENSCSAG00000009543) #35	TNFSF9 (ENSCSAG00000009573) #36	TUBB4A (ENSCSAG00000009578) #37	DENND1C (ENSCSAG00000009587)	CRB3 (ENSCSAG00000009594)
Rhinopithecus	ANCESTRAL SPECIES	5	ENSGT00940000162574 #7	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446.c #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00440000033329.a.a.b.c.b	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Golden snub-nosed monkey	MODERN SPECIES	2513	CLEC4G (ENSRROG00000042754)	FCER2 (ENSRROG00000028123) #7	MCEMP1 (ENSRROG00000027150) #9	RETN (ENSRROG00000036123)	STXBP2 (ENSRROG00000031759) #13	PCP2 (ENSRROG00000041091) #11	PET100 (ENSRROG00000038693) #12	XAB2 (ENSRROG00000040906) #14	CAMSAP3 (ENSRROG00000031815) #15	PNPLA6 (ENSRROG00000020845) #16	MCOLN1 (ENSRROG00000045339) #17	ZNF358 (ENSRROG00000036267) #18	TEX45 (ENSRROG00000030451) #19	PEX11G (ENSRROG00000034436) #20	ARHGEF18 (ENSRROG00000041171) #21	INSR (ENSRROG00000039199) #22	ZNF557 (ENSRROG00000040307) #24	ENSRROG00000032631 #25	ENSRROG00000039403 #25	ENSRROG00000027420
Black snub-nosed monkey	MODERN SPECIES	631	MCEMP1 (ENSRBIG00000033977) #9	RETN (ENSRBIG00000010665)	STXBP2 (ENSRBIG00000031943) #13	PCP2 (ENSRBIG00000042347) #11	PET100 (ENSRBIG00000042565) #12	XAB2 (ENSRBIG00000042442) #14	CAMSAP3 (ENSRBIG00000034941) #15	PNPLA6 (ENSRBIG00000033799) #16	MCOLN1 (ENSRBIG00000040814) #17	ZNF358 (ENSRBIG00000037697) #18	TEX45 (ENSRBIG00000035566) #19	ENSRBIG00000019450	PEX11G (ENSRBIG00000000494) #20	ARHGEF18 (ENSRBIG00000040638) #21	ENSRBIG00000030984	INSR (ENSRBIG00000036045) #22	ZNF557 (ENSRBIG00000040024) #24	ENSRBIG00000041526	ADGRE1 (ENSRBIG00000031436) #28	ENSRBIG00000016719	VAV1 (ENSRBIG00000040884) #29	SH2D3A (ENSRBIG00000033277) #30	TRIP10 (ENSRBIG00000030391) #31	ENSRBIG00000044563 #32	C3 (ENSRBIG00000027932) #33	ENSRBIG00000036454 #34	CD70 (ENSRBIG00000042145) #35	ENSRBIG00000035725	TNFSF9 (ENSRBIG00000029859) #36	TUBB4A (ENSRBIG00000028889) #37	DENND1C (ENSRBIG00000036859)
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00390000002019 #27	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573
Hominidae	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b #25	ENSGT00390000002019 #27	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.a #25	ENSGT00950000183005.b.c.b.b #25	ENSGT00390000002019 #27	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37
Gorilla	MODERN SPECIES	10	ENSGGOG00000003665 #8	MCEMP1 (ENSGGOG00000012639) #9	RETN (ENSGGOG00000009545)	STXBP2 (ENSGGOG00000002454) #13	PCP2 (ENSGGOG00000002452) #11	PET100 (ENSGGOG00000027594) #12	XAB2 (ENSGGOG00000002447) #14	CAMSAP3 (ENSGGOG00000002442) #15	PNPLA6 (ENSGGOG00000011946) #16	MCOLN1 (ENSGGOG00000010646) #17	ZNF358 (ENSGGOG00000010641) #18	TEX45 (ENSGGOG00000007773) #19	PEX11G (ENSGGOG00000004741) #20	ENSGGOG00000004730 #21	ENSGGOG00000027635	INSR (ENSGGOG00000013703) #22	ZNF557 (ENSGGOG00000041869) #24	ENSGGOG00000024776 #25	ENSGGOG00000024592 #25	ENSGGOG00000038257 #27	ENSGGOG00000044153 #27	ADGRE1 (ENSGGOG00000007858) #28	VAV1 (ENSGGOG00000012257) #29	SH2D3A (ENSGGOG00000012243) #30	ENSGGOG00000012222 #31	GPR108 (ENSGGOG00000013176) #32	C3 (ENSGGOG00000013159) #33	TNFSF14 (ENSGGOG00000015906) #34	CD70 (ENSGGOG00000009206) #35	TNFSF9 (ENSGGOG00000023927) #36	TUBB4A (ENSGGOG00000027067) #37
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.a #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Pan	ANCESTRAL SPECIES	14	ENSGT00940000162574 #7	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884.e #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.b #25	ENSGT00390000002019 #27	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972.d.a #37	ENSGT00940000161573
Chimpanzee	MODERN SPECIES	10	FCER2 (ENSPTRG00000010401) #7	MCEMP1 (ENSPTRG00000041150) #9	RETN (ENSPTRG00000010398)	STXBP2 (ENSPTRG00000010397) #13	PCP2 (ENSPTRG00000010396) #11	ENSPTRG00000039245 #12	XAB2 (ENSPTRG00000010395) #14	CAMSAP3 (ENSPTRG00000010394) #15	PNPLA6 (ENSPTRG00000010393) #16	MCOLN1 (ENSPTRG00000010392) #17	ZNF358 (ENSPTRG00000029154) #18	TEX45 (ENSPTRG00000010390) #19	PEX11G (ENSPTRG00000010388) #20	ENSPTRG00000010387 #21	ENSPTRG00000048270	INSR (ENSPTRG00000010386) #22	ZNF557 (ENSPTRG00000010385) #24	ENSPTRG00000029156 #25	ENSPTRG00000010384 #25	ENSPTRG00000045284 #25	ENSPTRG00000052340 #27	ENSPTRG00000050085 #27	ENSPTRG00000043646 #27	ADGRE1 (ENSPTRG00000010379) #28	VAV1 (ENSPTRG00000010378) #29	SH2D3A (ENSPTRG00000010377) #30	TRIP10 (ENSPTRG00000010376) #31	GPR108 (ENSPTRG00000010375) #32	C3 (ENSPTRG00000010373) #33	TNFSF14 (ENSPTRG00000010372) #34	CD70 (ENSPTRG00000040770) #35
Bonobo	MODERN SPECIES	10	FCER2 (ENSPPAG00000044010) #7	MCEMP1 (ENSPPAG00000033139) #9	RETN (ENSPPAG00000036077)	STXBP2 (ENSPPAG00000037782) #13	PCP2 (ENSPPAG00000026143) #11	ENSPPAG00000040560 #12	XAB2 (ENSPPAG00000043224) #14	CAMSAP3 (ENSPPAG00000036123) #15	PNPLA6 (ENSPPAG00000040772) #16	MCOLN1 (ENSPPAG00000035546) #17	ZNF358 (ENSPPAG00000013665) #18	ENSPPAG00000034081 #19	PEX11G (ENSPPAG00000019932) #20	ENSPPAG00000040930 #21	ENSPPAG00000031298	INSR (ENSPPAG00000028332) #22	ZNF557 (ENSPPAG00000030881) #24	ENSPPAG00000042336 #25	ENSPPAG00000012604 #27	ENSPPAG00000031773	ADGRE1 (ENSPPAG00000033638) #28	VAV1 (ENSPPAG00000036601) #29	SH2D3A (ENSPPAG00000037810) #30	TRIP10 (ENSPPAG00000034017) #31	GPR108 (ENSPPAG00000029432) #32	C3 (ENSPPAG00000035996) #33	TNFSF14 (ENSPPAG00000037246) #34	CD70 (ENSPPAG00000029346) #35	TNFSF9 (ENSPPAG00000043434) #36	TUBB4A (ENSPPAG00000021486) #37	DENND1C (ENSPPAG00000037306)
Human	MODERN SPECIES	10	ENSG00000269711	MCEMP1 (ENSG00000183019) #9	RETN (ENSG00000104918)	STXBP2 (ENSG00000076944) #13	PCP2 (ENSG00000174788) #11	PET100 (ENSG00000229833) #12	XAB2 (ENSG00000076924) #14	CAMSAP3 (ENSG00000076826) #15	PNPLA6 (ENSG00000032444) #16	MCOLN1 (ENSG00000090674) #17	ZNF358 (ENSG00000198816) #18	ENSG00000267952	TEX45 (ENSG00000198723) #19	PEX11G (ENSG00000104883) #20	ARHGEF18 (ENSG00000104880) #21	INSR (ENSG00000171105) #22	ZNF557 (ENSG00000130544) #24	MBD3L3 (ENSG00000182315) #25	MBD3L2 (ENSG00000230522) #25	MBD3L4 (ENSG00000205718) #25	MBD3L5 (ENSG00000237247) #25	MBD3L2B (ENSG00000196589) #25	ADGRE1 (ENSG00000174837) #28	VAV1 (ENSG00000141968) #29	SH2D3A (ENSG00000125731) #30	TRIP10 (ENSG00000125733) #31	GPR108 (ENSG00000125734) #32	C3 (ENSG00000125730) #33	TNFSF14 (ENSG00000125735) #34	CD70 (ENSG00000125726) #35	TNFSF9 (ENSG00000125657) #36
Orangutan	MODERN SPECIES	10	TRAPPC5 (ENSPPYG00000009483) #8	ENSPPYG00000009482 #9	ENSPPYG00000009481	STXBP2 (ENSPPYG00000009480) #13	PCP2 (ENSPPYG00000009479) #11	PET100 (ENSPPYG00000031913) #12	XAB2 (ENSPPYG00000009478) #14	CAMSAP3 (ENSPPYG00000013707) #15	PNPLA6 (ENSPPYG00000009477) #16	MCOLN1 (ENSPPYG00000030640) #17	ZNF358 (ENSPPYG00000009476) #18	TEX45 (ENSPPYG00000009475) #19	PEX11G (ENSPPYG00000030478) #20	ENSPPYG00000009473 #21	ENSPPYG00000009472	INSR (ENSPPYG00000009471) #22	ZNF557 (ENSPPYG00000009470) #24	ENSPPYG00000010518 #25	ENSPPYG00000038664 #25	ENSPPYG00000009469 #27	ENSPPYG00000009467	ADGRE1 (ENSPPYG00000009466) #28	VAV1 (ENSPPYG00000009465) #29	SH2D3A (ENSPPYG00000009464) #30	TRIP10 (ENSPPYG00000009463) #31	GPR108 (ENSPPYG00000009462) #32	C3 (ENSPPYG00000009461) #33	TNFSF14 (ENSPPYG00000031179) #34	ENSPPYG00000009460 #35	TNFSF9 (ENSPPYG00000009459) #36	TUBB4A (ENSPPYG00000041695) #37
Gibbon	MODERN SPECIES		CD209 (ENSNLEG00000001171)	ENSNLEG00000001167 #7	ENSNLEG00000001157 #9	RETN (ENSNLEG00000001150)	STXBP2 (ENSNLEG00000000987) #13	PCP2 (ENSNLEG00000000978) #11	PET100 (ENSNLEG00000000976) #12	ENSNLEG00000000965 #14	ENSNLEG00000000947 #15	PNPLA6 (ENSNLEG00000000886) #16	MCOLN1 (ENSNLEG00000000839) #17	ENSNLEG00000000836 #19	PEX11G (ENSNLEG00000000829) #20	ENSNLEG00000026714 #21	ENSNLEG00000028702	INSR (ENSNLEG00000000403) #22	ENSNLEG00000000394 #24	ADGRE1 (ENSNLEG00000000380) #28	ENSNLEG00000032882 #29	SH2D3A (ENSNLEG00000000371) #30	TRIP10 (ENSNLEG00000000351) #31	ENSNLEG00000000344 #32	C3 (ENSNLEG00000016006) #33	TNFSF14 (ENSNLEG00000016000) #34	CD70 (ENSNLEG00000015993) #35	TUBB4A (ENSNLEG00000032392) #37	DENND1C (ENSNLEG00000015941)	CRB3 (ENSNLEG00000030283)	ENSNLEG00000015935	KHSRP (ENSNLEG00000015923)	GTF2F1 (ENSNLEG00000015909)
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.m #25	ENSGT00950000183005.b.c.b.n #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573
Cebidae	ANCESTRAL SPECIES	20	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045.j.a #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.m #25	ENSGT00950000183005.b.c.b.n #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Marmoset	MODERN SPECIES	14	TRAPPC5 (ENSCJAG00000087099) #8	MCEMP1 (ENSCJAG00000008706) #9	RETN (ENSCJAG00000076735)	STXBP2 (ENSCJAG00000008608) #13	PCP2 (ENSCJAG00000008598) #11	PET100 (ENSCJAG00000008597) #12	XAB2 (ENSCJAG00000008568) #14	CAMSAP3 (ENSCJAG00000008533) #15	PNPLA6 (ENSCJAG00000037780) #16	MCOLN1 (ENSCJAG00000008429) #17	ZNF358 (ENSCJAG00000045015) #18	TEX45 (ENSCJAG00000008413) #19	PEX11G (ENSCJAG00000067505) #20	ARHGEF18 (ENSCJAG00000008397) #21	ENSCJAG00000008391	INSR (ENSCJAG00000016091) #22	ENSCJAG00000085022	ENSCJAG00000016144 #25	ENSCJAG00000038679 #25	ADGRE1 (ENSCJAG00000016187) #28	VAV1 (ENSCJAG00000016236) #29	SH2D3A (ENSCJAG00000036290) #30	TRIP10 (ENSCJAG00000016334) #31	GPR108 (ENSCJAG00000016419) #32	C3 (ENSCJAG00000016466) #33	TNFSF14 (ENSCJAG00000085938) #34	CD70 (ENSCJAG00000081455) #35	TNFSF9 (ENSCJAG00000016530) #36	TUBB4A (ENSCJAG00000016534) #37	DENND1C (ENSCJAG00000016543)	CRB3 (ENSCJAG00000044939)
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00940000162574 #7	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045.j.a #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.b #24	ENSGT00950000183005.b.c.b.m #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Bolivian squirrel monkey	MODERN SPECIES	150	FCER2 (ENSSBOG00000022822) #7	MCEMP1 (ENSSBOG00000035055) #9	RETN (ENSSBOG00000032117)	STXBP2 (ENSSBOG00000027963) #13	PCP2 (ENSSBOG00000001850) #11	PET100 (ENSSBOG00000034825) #12	XAB2 (ENSSBOG00000021743) #14	CAMSAP3 (ENSSBOG00000031166) #15	PNPLA6 (ENSSBOG00000035693) #16	MCOLN1 (ENSSBOG00000010279) #17	ZNF358 (ENSSBOG00000011944) #18	TEX45 (ENSSBOG00000033663) #19	PEX11G (ENSSBOG00000022122) #20	ARHGEF18 (ENSSBOG00000033367) #21	ENSSBOG00000030740	INSR (ENSSBOG00000023439) #22	ENSSBOG00000019851 #25	ENSSBOG00000031783 #25	ADGRE1 (ENSSBOG00000035948) #28	ENSSBOG00000032976	VAV1 (ENSSBOG00000034405) #29	SH2D3A (ENSSBOG00000017503) #30	TRIP10 (ENSSBOG00000007356) #31	GPR108 (ENSSBOG00000034952) #32	C3 (ENSSBOG00000024226) #33	TNFSF14 (ENSSBOG00000023172) #34	CD70 (ENSSBOG00000032929) #35	TNFSF9 (ENSSBOG00000036008) #36	TUBB4A (ENSSBOG00000019437) #37	DENND1C (ENSSBOG00000030628)	CRB3 (ENSSBOG00000030526)
Capuchin	MODERN SPECIES	53	IL21 (ENSCCAG00000012471)	MRAS (ENSCCAG00000035799)	NME9 (ENSCCAG00000022017)	ARMC8 (ENSCCAG00000031151)	RPS3A (ENSCCAG00000032295)	DBR1 (ENSCCAG00000025708)	A4GNT (ENSCCAG00000026570)	DZIP1L (ENSCCAG00000030514)	CLDN18 (ENSCCAG00000026760)	SOX14 (ENSCCAG00000009586)	IL20RB (ENSCCAG00000025761)	NCK1 (ENSCCAG00000027762)	SLC35G2 (ENSCCAG00000017946)	STAG1 (ENSCCAG00000037750)	PCCB (ENSCCAG00000034624)	INSR (ENSCCAG00000023219) #22	ZNF557 (ENSCCAG00000035545) #24	ENSCCAG00000019848 #25	ENSCCAG00000023589 #25	ENSCCAG00000026975	ADGRE1 (ENSCCAG00000035307) #28	VAV1 (ENSCCAG00000033162) #29	SH2D3A (ENSCCAG00000024880) #30	TRIP10 (ENSCCAG00000026415) #31	GPR108 (ENSCCAG00000030348) #32	C3 (ENSCCAG00000029672) #33	TNFSF14 (ENSCCAG00000028792) #34	CD70 (ENSCCAG00000029093) #35	TNFSF9 (ENSCCAG00000029091) #36	TUBB4A (ENSCCAG00000013999) #37	DENND1C (ENSCCAG00000034905)
Mas night monkey	MODERN SPECIES	937	FCER2 (ENSANAG00000032914) #7	MCEMP1 (ENSANAG00000023177) #9	RETN (ENSANAG00000033932)	STXBP2 (ENSANAG00000003874) #13	PCP2 (ENSANAG00000033070) #11	PET100 (ENSANAG00000033439) #12	XAB2 (ENSANAG00000034981) #14	ENSANAG00000027005 #15	PNPLA6 (ENSANAG00000027870) #16	MCOLN1 (ENSANAG00000023025) #17	ZNF358 (ENSANAG00000025717) #18	TEX45 (ENSANAG00000027070) #19	PEX11G (ENSANAG00000026711) #20	ARHGEF18 (ENSANAG00000022067) #21	ENSANAG00000035526	INSR (ENSANAG00000021860) #22	ZNF557 (ENSANAG00000029396) #24	ENSANAG00000025999 #25	ENSANAG00000027989 #25	ENSANAG00000028071	ADGRE1 (ENSANAG00000034495) #28	VAV1 (ENSANAG00000020752) #29	SH2D3A (ENSANAG00000023272) #30	TRIP10 (ENSANAG00000025154) #31	GPR108 (ENSANAG00000028875) #32	C3 (ENSANAG00000029174) #33	TNFSF14 (ENSANAG00000020878) #34	CD70 (ENSANAG00000037767) #35	TNFSF9 (ENSANAG00000028047) #36	TUBB4A (ENSANAG00000035357) #37	DENND1C (ENSANAG00000026774)
Tarsier	MODERN SPECIES	6648																INSR (ENSTSYG00000001830) #22
Strepsirrhini	ANCESTRAL SPECIES	26																ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Lemuriformes	ANCESTRAL SPECIES	22																ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428	ENSGT00940000162419
Lemuriformes_a	ANCESTRAL SPECIES	17										ENSGT00940000163044	ENSGT00940000154619	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000153686.s.b	ENSGT00940000153686.s.a.a	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a.i	ENSGT00940000159428	ENSGT00940000162419
Greater bamboo lemur	MODERN SPECIES	1153											ENSPSMG00000022969	ENSPSMG00000022971	ENSPSMG00000022975	ENSPSMG00000022982	ENSPSMG00000022986	INSR (ENSPSMG00000023047) #22	ENSPSMG00000023072	ENSPSMG00000023075 #25
Coquerels sifaka	MODERN SPECIES	348													ZNF317 (ENSPCOG00000017287)	ENSPCOG00000024249	ENSPCOG00000012646	INSR (ENSPCOG00000025098) #22	ADGRE1 (ENSPCOG00000005255) #28	VAV1 (ENSPCOG00000019002) #29	SH2D3A (ENSPCOG00000018681) #30	TRIP10 (ENSPCOG00000013866) #31	GPR108 (ENSPCOG00000007215) #32	C3 (ENSPCOG00000018007) #33	TNFSF14 (ENSPCOG00000018066) #34	CD70 (ENSPCOG00000015987) #35	TNFSF9 (ENSPCOG00000014608) #36	TUBB4A (ENSPCOG00000015978) #37	DENND1C (ENSPCOG00000004246)	CRB3 (ENSPCOG00000028855)	SLC25A23 (ENSPCOG00000001217)	SLC25A41 (ENSPCOG00000003363)	KHSRP (ENSPCOG00000027506)
Mouse lemur	MODERN SPECIES	16																INSR (ENSMICG00000011978) #22	ENSMICG00000042948 #25	ADGRE1 (ENSMICG00000034364) #28	VAV1 (ENSMICG00000014001) #29	SH2D3A (ENSMICG00000000937) #30	TRIP10 (ENSMICG00000000935) #31	GPR108 (ENSMICG00000042263) #32	C3 (ENSMICG00000000921) #33	TNFSF14 (ENSMICG00000033223) #34	CD70 (ENSMICG00000042047) #35	TNFSF9 (ENSMICG00000046337) #36	TUBB4A (ENSMICG00000014890) #37	DENND1C (ENSMICG00000004586)	CRB3 (ENSMICG00000034140)	SLC25A23 (ENSMICG00000034151)	KHSRP (ENSMICG00000007863)
Bushbaby	MODERN SPECIES	417	FCER2 (ENSOGAG00000012571) #7	ENSOGAG00000032065 #8	RETN (ENSOGAG00000005547)	STXBP2 (ENSOGAG00000016167) #13	PCP2 (ENSOGAG00000001240) #11	PET100 (ENSOGAG00000032397) #12	XAB2 (ENSOGAG00000025016) #14	CAMSAP3 (ENSOGAG00000029090) #15	PNPLA6 (ENSOGAG00000016150) #16	MCOLN1 (ENSOGAG00000016143) #17	ZNF358 (ENSOGAG00000029525) #18	TEX45 (ENSOGAG00000031406) #19	PEX11G (ENSOGAG00000002414) #20	ARHGEF18 (ENSOGAG00000002411) #21	ENSOGAG00000028071	INSR (ENSOGAG00000002968) #22
Euarchontoglires_A	ANCESTRAL SPECIES	20	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Glires	ANCESTRAL SPECIES	21	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f	ENSGT00950000183069.b.b.a.a	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00950000183069.b.b.a.a	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b.b.a.a.a	ENSGT00950000183069.b.a.b	ENSGT00950000183069.b.b.a.a.b	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573
Marmotini	ANCESTRAL SPECIES	24	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b.b.a.a.a	ENSGT00950000183069.b.a.b	ENSGT00950000183069.b.b.a.a.b	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a.e
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b.b.a.a.a	ENSGT00950000183069.b.b.a.a.b	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000014595.b.d	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a.e
Arctic ground squirrel	MODERN SPECIES	640	TRAPPC5 (ENSUPAG00010018411) #8	ENSUPAG00010018416 #9	RETN (ENSUPAG00010018431)	STXBP2 (ENSUPAG00010018439) #13	PCP2 (ENSUPAG00010018459) #11	PET100 (ENSUPAG00010018530) #12	XAB2 (ENSUPAG00010018543) #14	CAMSAP3 (ENSUPAG00010018576) #15	ENSUPAG00010018639	PNPLA6 (ENSUPAG00010018645) #16	MCOLN1 (ENSUPAG00010018941) #17	ZNF358 (ENSUPAG00010018967) #18	ENSUPAG00010018970 #19	PEX11G (ENSUPAG00010018993) #20	ARHGEF18 (ENSUPAG00010019006) #21	INSR (ENSUPAG00010019031) #22	ENSUPAG00010019060	ENSUPAG00010019126	ENSUPAG00010019129	ENSUPAG00010019132	ADGRE1 (ENSUPAG00010019145) #28	VAV1 (ENSUPAG00010019168) #29	SH2D3A (ENSUPAG00010019295) #30	TRIP10 (ENSUPAG00010000032) #31	GPR108 (ENSUPAG00010000266) #32
Squirrel	MODERN SPECIES	188	FCER2 (ENSSTOG00000019631) #7	TRAPPC5 (ENSSTOG00000028575) #8	RETN (ENSSTOG00000026972)	STXBP2 (ENSSTOG00000012901) #13	PET100 (ENSSTOG00000024943) #12	PCP2 (ENSSTOG00000023694) #11	XAB2 (ENSSTOG00000024533) #14	CAMSAP3 (ENSSTOG00000021723) #15	PNPLA6 (ENSSTOG00000016189) #16	MCOLN1 (ENSSTOG00000016182) #17	ZNF358 (ENSSTOG00000020033) #18	TEX45 (ENSSTOG00000009768) #19	PEX11G (ENSSTOG00000009764) #20	ARHGEF18 (ENSSTOG00000009745) #21	ENSSTOG00000033747	INSR (ENSSTOG00000001089) #22	ENSSTOG00000028099	ADGRE1 (ENSSTOG00000014756) #28	VAV1 (ENSSTOG00000010806) #29	TRIP10 (ENSSTOG00000004959) #31	GPR108 (ENSSTOG00000028930) #32	ENSSTOG00000032813 ##33	TNFSF14 (ENSSTOG00000021016) #34	ENSSTOG00000029829	CD70 (ENSSTOG00000027620) #35	TUBB4A (ENSSTOG00000020465) #37	ENSSTOG00000032756	ENSSTOG00000002404	CRB3 (ENSSTOG00000029565)	SLC25A23 (ENSSTOG00000002387)	SLC25A41 (ENSSTOG00000023022)
Alpin marmot	MODERN SPECIES	88	CLEC4G (ENSMMMG00000021166)	FCER2 (ENSMMMG00000021072) #7	TRAPPC5 (ENSMMMG00000021066) #8	ENSMMMG00000021054 #9	RETN (ENSMMMG00000021052)	STXBP2 (ENSMMMG00000021045) #13	PCP2 (ENSMMMG00000020990) #11	PET100 (ENSMMMG00000020986) #12	XAB2 (ENSMMMG00000020949) #14	CAMSAP3 (ENSMMMG00000020919) #15	PNPLA6 (ENSMMMG00000020700) #16	MCOLN1 (ENSMMMG00000020678) #17	ENSMMMG00000020650 #19	PEX11G (ENSMMMG00000020643) #20	ARHGEF18 (ENSMMMG00000020610) #21	INSR (ENSMMMG00000020292) #22	ENSMMMG00000020286	ENSMMMG00000020284	ENSMMMG00000020280	ENSMMMG00000020241	ENSMMMG00000020108	ENSMMMG00000020088	ADGRE1 (ENSMMMG00000019994) #28	VAV1 (ENSMMMG00000019856) #29	SH2D3A (ENSMMMG00000019845) #30	TRIP10 (ENSMMMG00000019830) #31	GPR108 (ENSMMMG00000019821) #32	TNFSF14 (ENSMMMG00000019585) #34	CD70 (ENSMMMG00000019578) #35	TNFSF9 (ENSMMMG00000019570) #36	TUBB4A (ENSMMMG00000019550) #37
Eurasian red squirrel	MODERN SPECIES	7	ENSSVLG00005025752 #14	ENSSVLG00005025742 #15	ENSSVLG00005025738 #13	ENSSVLG00005025729 #13	ENSSVLG00005025722 #11	PET100 (ENSSVLG00005025709) #12	ENSSVLG00005025698 #14	CAMSAP3 (ENSSVLG00005025682) #15	ENSSVLG00005025663 #16	MCOLN1 (ENSSVLG00005025644) #17	ZNF358 (ENSSVLG00005025634) #18	ENSSVLG00005025619 #19	PEX11G (ENSSVLG00005025607) #20	ARHGEF18 (ENSSVLG00005025588) #21	ENSSVLG00005025569	INSR (ENSSVLG00005025555) #22	ENSSVLG00005025544	ENSSVLG00005025504	ENSSVLG00005025471	ENSSVLG00005025459	ENSSVLG00005025293	ENSSVLG00005025148	ENSSVLG00005025094	ENSSVLG00005025028	ADGRE1 (ENSSVLG00005024961) #28	VAV1 (ENSSVLG00005024496) #29	SH2D3A (ENSSVLG00005024392) #30	TRIP10 (ENSSVLG00005024340) #31	GPR108 (ENSSVLG00005024305) #32	C3 (ENSSVLG00005023985) #33	TNFSF14 (ENSSVLG00005023899) #34
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00950000183069.b.b.b.e.b.a.b	ENSGT00950000182970.B	ENSGT00390000016717
Hystricomorpha_a	ANCESTRAL SPECIES	69	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00950000183069.b.b.b.e.b.a.b.a	ENSGT00950000182970.B	ENSGT00390000016717
Hystricomorpha_b	ANCESTRAL SPECIES	93	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Long-tailed chinchilla	MODERN SPECIES	270	CLEC4G (ENSCLAG00000002415)	FCER2 (ENSCLAG00000002410) #7	TRAPPC5 (ENSCLAG00000002743) #8	RETN (ENSCLAG00000002761)	STXBP2 (ENSCLAG00000002794) #13	PCP2 (ENSCLAG00000002861) #11	PET100 (ENSCLAG00000002916) #12	XAB2 (ENSCLAG00000002999) #14	CAMSAP3 (ENSCLAG00000006625) #15	PNPLA6 (ENSCLAG00000002800) #16	MCOLN1 (ENSCLAG00000003025) #17	ZNF358 (ENSCLAG00000003278) #18	PEX11G (ENSCLAG00000003378) #20	ARHGEF18 (ENSCLAG00000003467) #21	ENSCLAG00000002497	INSR (ENSCLAG00000002624) #22
Degu	MODERN SPECIES	255	CLEC4G (ENSODEG00000011804)	FCER2 (ENSODEG00000012810) #7	TRAPPC5 (ENSODEG00000012661) #8	RETN (ENSODEG00000012179)	STXBP2 (ENSODEG00000012329) #13	PCP2 (ENSODEG00000011839) #11	PET100 (ENSODEG00000011997) #12	XAB2 (ENSODEG00000011794) #14	ENSODEG00000012129 #15	PNPLA6 (ENSODEG00000012572) #16	MCOLN1 (ENSODEG00000012479) #17	ZNF358 (ENSODEG00000012219) #18	TEX45 (ENSODEG00000012588) #19	PEX11G (ENSODEG00000012355) #20	ARHGEF18 (ENSODEG00000012629) #21	INSR (ENSODEG00000012024) #22	ENSODEG00000019915	ENSODEG00000011907
Guinea pig	MODERN SPECIES	42	TRAPPC5 (ENSCPOG00000027190) #8	ENSCPOG00000038319 #9	RETN (ENSCPOG00000037415)	STXBP2 (ENSCPOG00000022154) #13	PCP2 (ENSCPOG00000020356) #11	PET100 (ENSCPOG00000038374) #12	XAB2 (ENSCPOG00000009283) #14	CAMSAP3 (ENSCPOG00000022909) #15	PNPLA6 (ENSCPOG00000010823) #16	MCOLN1 (ENSCPOG00000009726) #17	ZNF358 (ENSCPOG00000009724) #18	ENSCPOG00000004011	TEX45 (ENSCPOG00000004245) #19	PEX11G (ENSCPOG00000003503) #20	ENSCPOG00000000165 #21	INSR (ENSCPOG00000012986) #22	ENSCPOG00000024100	ENSCPOG00000033338	ENSCPOG00000023880	ENSCPOG00000027337	ENSCPOG00000023273	MAN2B1 (ENSCPOG00000002295)	WDR83OS (ENSCPOG00000022365)	WDR83 (ENSCPOG00000002306)	DHPS (ENSCPOG00000002309)	ENSCPOG00000033374	FBXW9 (ENSCPOG00000007026)	TNPO2 (ENSCPOG00000007033)	TRIR (ENSCPOG00000003765)	GET3 (ENSCPOG00000026971)	BEST2 (ENSCPOG00000000768)
Naked mole-rat female	MODERN SPECIES	21	RETN (ENSHGLG00000008198)	STXBP2 (ENSHGLG00000006173) #13	PCP2 (ENSHGLG00000005217) #11	PET100 (ENSHGLG00000049177) #12	XAB2 (ENSHGLG00000011423) #14	CAMSAP3 (ENSHGLG00000006897) #15	ENSHGLG00000041062	PNPLA6 (ENSHGLG00000006968) #16	MCOLN1 (ENSHGLG00000009121) #17	ZNF358 (ENSHGLG00000006780) #18	ENSHGLG00000035056	ENSHGLG00000046061	ENSHGLG00000010501 #19	PEX11G (ENSHGLG00000009398) #20	ARHGEF18 (ENSHGLG00000007068) #21	ENSHGLG00000016034 #22	ENSHGLG00000009496	ENSHGLG00000014951	ENSHGLG00000018498	ENSHGLG00000021249	ENSHGLG00000020131	ENSHGLG00000042133	ENSHGLG00000042999	ENSHGLG00000021014	ENSHGLG00000035297	ENSHGLG00000039376	ENSHGLG00000011841	ENSHGLG00000021231	ENSHGLG00000020580	ENSHGLG00000049921	ENSHGLG00000039559
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f	ENSGT00950000183005.b.c.b #25	ENSGT00940000160844.a ##24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f
Muroidea	ANCESTRAL SPECIES	70	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f
Muroidea_A	ANCESTRAL SPECIES	27	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00550000075006	ENSGT00950000183061.a.a.b.ib	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00900000143638	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000162967
Cricetidae	ANCESTRAL SPECIES	27	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00550000075006	ENSGT00950000183061.a.a.b.ib	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00900000143638	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000162967
Cricetinae	ANCESTRAL SPECIES	19	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00550000075006	ENSGT00950000183061.a.a.b.ib	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484
Chinese hamster chok1gshd	MODERN SPECIES	130	Trappc5 (ENSCGRG00001012764) #8	Mcemp1 (ENSCGRG00001017380) #9	Retn (ENSCGRG00001022648)	Stxbp2 (ENSCGRG00001013552) #13	Pcp2 (ENSCGRG00001022639) #11	Pet100 (ENSCGRG00001024484) #12	Xab2 (ENSCGRG00001004232) #14	Camsap3 (ENSCGRG00001001487) #15	Pnpla6 (ENSCGRG00001009465) #16	Mcoln1 (ENSCGRG00001021295) #17	Zfp358 (ENSCGRG00001003945) #18	Tex45 (ENSCGRG00001018974) #19	Pex11g (ENSCGRG00001015493) #20	Arhgef18 (ENSCGRG00001023194) #21	ENSCGRG00001024892	Insr (ENSCGRG00001016526) #22	ENSCGRG00001023631	ENSCGRG00001024583	ENSCGRG00001014298	Rfc3 (ENSCGRG00001017292)	Stard13 (ENSCGRG00001013165)	Kl (ENSCGRG00001023796)	Pds5b (ENSCGRG00001010829)	N4bp2l2 (ENSCGRG00001023249)	N4bp2l1 (ENSCGRG00001015340)	Brca2 (ENSCGRG00001017867)	Zar1l (ENSCGRG00001012256)	Fry (ENSCGRG00001011470)	Rxfp2 (ENSCGRG00001014494)	B3glct (ENSCGRG00001024270)	Hsph1 (ENSCGRG00001021270)
Cricetidae_B	ANCESTRAL SPECIES	49	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00550000075006	ENSGT00950000183061.a.a.b.ib	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00900000143638	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000162967
Northern American deer mouse	MODERN SPECIES	15	Trappc5 (ENSPEMG00000021436) #8	Mcemp1 (ENSPEMG00000012230) #9	Retn (ENSPEMG00000017283)	Stxbp2 (ENSPEMG00000023324) #13	Pcp2 (ENSPEMG00000000434) #11	Pet100 (ENSPEMG00000026580) #12	ENSPEMG00000026248 #14	Camsap3 (ENSPEMG00000023059) #15	Pnpla6 (ENSPEMG00000011542) #16	Mcoln1 (ENSPEMG00000023945) #17	Zfp358 (ENSPEMG00000013331) #18	Tex45 (ENSPEMG00000000325) #19	Pex11g (ENSPEMG00000016020) #20	Arhgef18 (ENSPEMG00000012546) #21	ENSPEMG00000007811	Insr (ENSPEMG00000016970) #22	Rfc3 (ENSPEMG00000011785)	Stard13 (ENSPEMG00000012080)	Kl (ENSPEMG00000009641)	Pds5b (ENSPEMG00000012114)	ENSPEMG00000018171	N4bp2l2 (ENSPEMG00000010796)	N4bp2l1 (ENSPEMG00000027409)	Brca2 (ENSPEMG00000000801)	Zar1l (ENSPEMG00000008692)	Fry (ENSPEMG00000002240)	ENSPEMG00000029870	ENSPEMG00000029532	Zscan25 (ENSPEMG00000024325)	ENSPEMG00000014368
Prairie vole	MODERN SPECIES	208	Trappc5 (ENSMOCG00000008448) #8	Mcemp1 (ENSMOCG00000015228) #9	Retn (ENSMOCG00000006568)	Stxbp2 (ENSMOCG00000013417) #13	Pcp2 (ENSMOCG00000013359) #11	ENSMOCG00000020690 #12	Xab2 (ENSMOCG00000014979) #14	Camsap3 (ENSMOCG00000019414) #15	Pnpla6 (ENSMOCG00000009248) #16	Mcoln1 (ENSMOCG00000018329) #17	Zfp358 (ENSMOCG00000005230) #18	Tex45 (ENSMOCG00000011589) #19	Pex11g (ENSMOCG00000004536) #20	Arhgef18 (ENSMOCG00000012600) #21	ENSMOCG00000019346	Insr (ENSMOCG00000014283) #22	ENSMOCG00000018563
Murinae	ANCESTRAL SPECIES	28	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182788.a.b.b.b.e	ENSGT00550000075006	ENSGT00950000183061.a.a.b.ib	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b	ENSGT00610000086058.b	ENSGT00940000158948.b	ENSGT00940000155499	ENSGT00940000159635	ENSGT00940000162967	ENSGT00390000009484
Mus	ANCESTRAL SPECIES	6	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Mus_B	ANCESTRAL SPECIES	6	ENSGT00960000193309	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Mouse	MODERN SPECIES	17	Fcor (ENSMUSG00000089665)	Mcemp1 (ENSMUSG00000013974) #9	Retn (ENSMUSG00000012705)	Stxbp2 (ENSMUSG00000004626) #13	Pcp2 (ENSMUSG00000004630) #11	Pet100 (ENSMUSG00000087687) #12	Xab2 (ENSMUSG00000019470) #14	Camsap3 (ENSMUSG00000044433) #15	Rps23rg1 (ENSMUSG00000065952)	Pnpla6 (ENSMUSG00000004565) #16	Mcoln1 (ENSMUSG00000004567) #17	Zfp358 (ENSMUSG00000047264) #18	Tex45 (ENSMUSG00000040340) #19	Pex11g (ENSMUSG00000069633) #20	Arhgef18 (ENSMUSG00000004568) #21	Insr (ENSMUSG00000005534) #22
Mus_C	ANCESTRAL SPECIES	5	ENSGT00960000193309	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Steppe mouse	MODERN SPECIES	2640	Trappc5 (ENSMSIG00000009751) #8	Fcor (ENSMSIG00000009739)	Mcemp1 (ENSMSIG00000009728) #9	Retn (ENSMSIG00000009715)	Stxbp2 (ENSMSIG00000009635) #13	Pcp2 (ENSMSIG00000009514) #11	Pet100 (ENSMSIG00000009482) #12	Xab2 (ENSMSIG00000009409) #14	Camsap3 (ENSMSIG00000008616) #15	Pnpla6 (ENSMSIG00000007864) #16	Mcoln1 (ENSMSIG00000007828) #17	Zfp358 (ENSMSIG00000007815) #18	Tex45 (ENSMSIG00000007810) #19	Pex11g (ENSMSIG00000007747) #20	Arhgef18 (ENSMSIG00000007534) #21	Insr (ENSMSIG00000007338) #22
spretus	MODERN SPECIES	17	Trappc5 (MGP_SPRETEiJ_G0031889) #8	Mcemp1 (MGP_SPRETEiJ_G0031888) #9	Retn (MGP_SPRETEiJ_G0031887)	Stxbp2 (MGP_SPRETEiJ_G0031886) #13	Pcp2 (MGP_SPRETEiJ_G0031885) #11	Pet100 (MGP_SPRETEiJ_G0031884) #12	Xab2 (MGP_SPRETEiJ_G0031883) #14	Camsap3 (MGP_SPRETEiJ_G0031882) #15	Pnpla6 (MGP_SPRETEiJ_G0031880) #16	Mcoln1 (MGP_SPRETEiJ_G0031879) #17	Zfp358 (MGP_SPRETEiJ_G0031878) #18	Tex45 (MGP_SPRETEiJ_G0031877) #19	Pex11g (MGP_SPRETEiJ_G0031876) #20	MGP_SPRETEiJ_G0031875 #21	MGP_SPRETEiJ_G0031874	Insr (MGP_SPRETEiJ_G0031873) #22
Ryukyu mouse	MODERN SPECIES	17	Trappc5 (MGP_CAROLIEiJ_G0030781) #8	Mcemp1 (MGP_CAROLIEiJ_G0030780) #9	Retn (MGP_CAROLIEiJ_G0030779)	Stxbp2 (MGP_CAROLIEiJ_G0030778) #13	Pcp2 (MGP_CAROLIEiJ_G0030777) #11	Pet100 (MGP_CAROLIEiJ_G0030776) #12	Xab2 (MGP_CAROLIEiJ_G0030775) #14	Camsap3 (MGP_CAROLIEiJ_G0030774) #15	Pnpla6 (MGP_CAROLIEiJ_G0030772) #16	Mcoln1 (MGP_CAROLIEiJ_G0030771) #17	Zfp358 (MGP_CAROLIEiJ_G0030770) #18	Tex45 (MGP_CAROLIEiJ_G0030769) #19	Pex11g (MGP_CAROLIEiJ_G0030768) #20	MGP_CAROLIEiJ_G0030767 #21	MGP_CAROLIEiJ_G0030766	Insr (MGP_CAROLIEiJ_G0030765) #22
Shrew mouse	MODERN SPECIES	10	Evi5l (MGP_PahariEiJ_G0021254)	Cd209c (MGP_PahariEiJ_G0021253)	Cd209b (MGP_PahariEiJ_G0021252)	Cd209a (MGP_PahariEiJ_G0021251)	MGP_PahariEiJ_G0021250	MGP_PahariEiJ_G0021249	Stxbp2 (MGP_PahariEiJ_G0021248) #13	Xab2 (MGP_PahariEiJ_G0021247) #14	Camsap3 (MGP_PahariEiJ_G0021246) #15	MGP_PahariEiJ_G0021244 #16	MGP_PahariEiJ_G0021243 #17	Zfp358 (MGP_PahariEiJ_G0021242) #18	Tex45 (MGP_PahariEiJ_G0021241) #19	MGP_PahariEiJ_G0021240 #20	MGP_PahariEiJ_G0021239 #21	Insr (MGP_PahariEiJ_G0021238) #22	Cyp2b10 (MGP_PahariEiJ_G0021237)	Cyp2s1 (MGP_PahariEiJ_G0021236)	Axl (MGP_PahariEiJ_G0021235)	Hnrnpul1 (MGP_PahariEiJ_G0021234)	Ccdc97 (MGP_PahariEiJ_G0021233)	Tgfb1 (MGP_PahariEiJ_G0021232)	B9d2 (MGP_PahariEiJ_G0021231)	Tmem91 (MGP_PahariEiJ_G0021230)	Exosc5 (MGP_PahariEiJ_G0021229)	Bckdha (MGP_PahariEiJ_G0021228)	B3gnt8 (MGP_PahariEiJ_G0021227)	Dmac2 (MGP_PahariEiJ_G0021226)	Erich4 (MGP_PahariEiJ_G0021225)	MGP_PahariEiJ_G0021224	MGP_PahariEiJ_G0021223
Rat	MODERN SPECIES	3	Fcer2 (ENSRNOG00000001005) #7	Trappc5 (ENSRNOG00000001003) #8	Mcemp1 (ENSRNOG00000028259) #9	Retn (ENSRNOG00000001001)	Stxbp2 (ENSRNOG00000000994) #13	Pcp2 (ENSRNOG00000000993) #11	Pet100 (ENSRNOG00000050169) #12	Xab2 (ENSRNOG00000000988) #14	Camsap3 (ENSRNOG00000000986) #15	Pnpla6 (ENSRNOG00000000977) #16	Mcoln1 (ENSRNOG00000000975) #17	Zfp358 (ENSRNOG00000000974) #18	Tex45 (ENSRNOG00000000973) #19	Pex11g (ENSRNOG00000028100) #20	Arhgef18 (ENSRNOG00000028090) #21	Insr (ENSRNOG00000029986) #22	ENSRNOG00000068853	ENSRNOG00000066843	ENSRNOG00000071056	Rfc3 (ENSRNOG00000001088)	Stard13 (ENSRNOG00000001090)	Kl (ENSRNOG00000001092)	AABR07034928.1 (ENSRNOG00000034215)	Pds5b (ENSRNOG00000001098)	N4bp2l2 (ENSRNOG00000001108)	N4bp2l1 (ENSRNOG00000059322)	Brca2 (ENSRNOG00000001111)	Zar1l (ENSRNOG00000051294)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1274	Mcemp1 (ENSNGAG00000004530) #9	Retn (ENSNGAG00000005192)	Stxbp2 (ENSNGAG00000007590) #13	Pcp2 (ENSNGAG00000013181) #11	Pet100 (ENSNGAG00000013697) #12	ENSNGAG00000017173 #14	Camsap3 (ENSNGAG00000010370) #15	Pnpla6 (ENSNGAG00000003086) #16	Mcoln1 (ENSNGAG00000018276) #17	Zfp358 (ENSNGAG00000016868) #18	Tex45 (ENSNGAG00000018173) #19	Pex11g (ENSNGAG00000020756) #20	Arhgef18 (ENSNGAG00000001074) #21	ENSNGAG00000019898	ENSNGAG00000000232	Insr (ENSNGAG00000004448) #22	ENSNGAG00000017267	Cd320 (ENSNGAG00000017906)	Ndufa7 (ENSNGAG00000000050)	ENSNGAG00000000148	Kank3 (ENSNGAG00000000666)	Angptl4 (ENSNGAG00000014801)	Rab11b (ENSNGAG00000015757)	Marchf2 (ENSNGAG00000018673)	Hnrnpm (ENSNGAG00000003707)	Pram1 (ENSNGAG00000000156)	Zfp414 (ENSNGAG00000001048)	Myo1f (ENSNGAG00000011575)	Adamts10 (ENSNGAG00000002825)	Actl9 (ENSNGAG00000013965)
Lesser Egyptian jerboa	MODERN SPECIES	85	ENSJJAG00000012608	ENSJJAG00000008199	Stxbp2 (ENSJJAG00000023392) #13	Pcp2 (ENSJJAG00000012767) #11	Pet100 (ENSJJAG00000005595) #12	Xab2 (ENSJJAG00000021187) #14	ENSJJAG00000018948 #15	ENSJJAG00000010945	Pnpla6 (ENSJJAG00000024045) #16	Mcoln1 (ENSJJAG00000014530) #17	Zfp358 (ENSJJAG00000021547) #18	Tex45 (ENSJJAG00000017920) #19	Pex11g (ENSJJAG00000019745) #20	Arhgef18 (ENSJJAG00000007633) #21	ENSJJAG00000013191	Insr (ENSJJAG00000023697) #22	Slc35d1 (ENSJJAG00000018167)	Mier1 (ENSJJAG00000014161)	Dnai4 (ENSJJAG00000013132)	ENSJJAG00000001836	Sgip1 (ENSJJAG00000011912)	ENSJJAG00000023231	ENSJJAG00000011111	Pde4b (ENSJJAG00000015966)	Lepr (ENSJJAG00000001138)	ENSJJAG00000024179	ENSJJAG00000023828	ENSJJAG00000014277	Ak4 (ENSJJAG00000014122)	ENSJJAG00000010970	Cbfb (ENSJJAG00000013223)
Kangaroo rat	MODERN SPECIES	489	Trappc5 (ENSDORG00000025026) #8	ENSDORG00000009640 #9	Retn (ENSDORG00000009639)	Stxbp2 (ENSDORG00000009637) #13	Pcp2 (ENSDORG00000009635) #11	Pet100 (ENSDORG00000026482) #12	Xab2 (ENSDORG00000009631) #14	ENSDORG00000025699 #15	Pnpla6 (ENSDORG00000007100) #16	Mcoln1 (ENSDORG00000007746) #17	Zfp358 (ENSDORG00000007745) #18	ENSDORG00000007744 #19	ENSDORG00000007742 #20	ENSDORG00000007738 #21	ENSDORG00000027903	Insr (ENSDORG00000014700) #22	Zfp558 (ENSDORG00000009664) ##24	ENSDORG00000028622	Or1m1 (ENSDORG00000024440)	ENSDORG00000027907	ENSDORG00000025316	ENSDORG00000029125
Lagomorpha	ANCESTRAL SPECIES	85	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Rabbit	MODERN SPECIES	500	FCER2 (ENSOCUG00000024433) #7	TRAPPC5 (ENSOCUG00000000878) #8	ENSOCUG00000000877 #9	RETN (ENSOCUG00000025105)	STXBP2 (ENSOCUG00000010121) #13	PCP2 (ENSOCUG00000027248) #11	PET100 (ENSOCUG00000032447) #12	XAB2 (ENSOCUG00000000874) #14	CAMSAP3 (ENSOCUG00000022921) #15	PNPLA6 (ENSOCUG00000011769) #16	MCOLN1 (ENSOCUG00000011763) #17	ZNF358 (ENSOCUG00000011756) #18	TEX45 (ENSOCUG00000032724) #19	PEX11G (ENSOCUG00000010861) #20	ENSOCUG00000010846	INSR (ENSOCUG00000004436) #22	ENSOCUG00000036042	ENSOCUG00000023906	ENSOCUG00000025263
Pika	MODERN SPECIES	3358																ENSOPRG00000004390 #22
Tree shrew	MODERN SPECIES	3775																ENSTBEG00000000208 #22
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f	ENSGT00950000183069.b	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000164486	ENSGT00940000161972 #37	ENSGT00940000161573
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000154619.g.a.a	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783	ENSGT00940000164306	ENSGT00940000153686	ENSGT00940000153277.A	ENSGT00940000156425	ENSGT00940000163210	ENSGT00940000164004
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f
Suina	ANCESTRAL SPECIES	16	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.f.e.b	ENSGT00950000183005.b.c.b #25	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Chacoan peccary	MODERN SPECIES	770	TRAPPC5 (ENSCWAG00000014607) #8	ENSCWAG00000014568 #9	RETN (ENSCWAG00000014504)	STXBP2 (ENSCWAG00000014429) #13	PCP2 (ENSCWAG00000014336) #11	PET100 (ENSCWAG00000014228) #12	XAB2 (ENSCWAG00000014165) #14	CAMSAP3 (ENSCWAG00000013824) #15	PNPLA6 (ENSCWAG00000012227) #16	MCOLN1 (ENSCWAG00000012124) #17	ZNF358 (ENSCWAG00000012107) #18	TEX45 (ENSCWAG00000011996) #19	PEX11G (ENSCWAG00000011918) #20	ARHGEF18 (ENSCWAG00000011670) #21	ENSCWAG00000011535	INSR (ENSCWAG00000011448) #22	ENSCWAG00000011389	ENSCWAG00000011348 #25	ENSCWAG00000011207	ADGRE1 (ENSCWAG00000010899) #28	VAV1 (ENSCWAG00000009741) #29	SH2D3A (ENSCWAG00000009467) #30	TRIP10 (ENSCWAG00000009207) #31	GPR108 (ENSCWAG00000009134) #32	C3 (ENSCWAG00000008783) #33	TNFSF14 (ENSCWAG00000008731) #34	CD70 (ENSCWAG00000008679) #35	TNFSF9 (ENSCWAG00000008641) #36	TUBB4A (ENSCWAG00000008574) #37	DENND1C (ENSCWAG00000008209)	CRB3 (ENSCWAG00000008071)
Pig	MODERN SPECIES	10	ENSSSCG00000040377 #7	TRAPPC5 (ENSSSCG00000013573) #8	PCP2 (ENSSSCG00000037188) #11	ENSSSCG00000033183 #9	RETN (ENSSSCG00000013575)	STXBP2 (ENSSSCG00000013576) #13	PET100 (ENSSSCG00000034876) #12	XAB2 (ENSSSCG00000013582) #14	CAMSAP3 (ENSSSCG00000013583) #15	PNPLA6 (ENSSSCG00000013572) #16	MCOLN1 (ENSSSCG00000013570) #17	ZNF358 (ENSSSCG00000025078) #18	TEX45 (ENSSSCG00000013571) #19	PEX11G (ENSSSCG00000013569) #20	ARHGEF18 (ENSSSCG00000013568) #21	INSR (ENSSSCG00000013566) #22	ENSSSCG00000058214	ENSSSCG00000060073 #25	ENSSSCG00000059639	ENSSSCG00000061581	ENSSSCG00000053848 #25	ENSSSCG00000059567	ENSSSCG00000055205	ENSSSCG00000055659 #25	ENSSSCG00000056479	ENSSSCG00000026402	ENSSSCG00000050577	ENSSSCG00000040016	ENSSSCG00000013556 #28	VAV1 (ENSSSCG00000013553) #29	SH2D3A (ENSSSCG00000022380) #30
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844.d #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000161836	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844.d #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Sperm whale	DUPLICATION
Sperm whale	MODERN SPECIES	705																ENSPCTG00005015460 #22
Sperm whale	MODERN SPECIES	11	MLLT1 (ENSPCTG00005015937)	ACER1 (ENSPCTG00005015854)	CLPP (ENSPCTG00005015762)	KHSRP (ENSPCTG00005015259)	TNFSF9 (ENSPCTG00005015187) #36	CD70 (ENSPCTG00005015119) #35	TNFSF14 (ENSPCTG00005015045) #34	C3 (ENSPCTG00005014524) #33	GPR108 (ENSPCTG00005014379) #32	TRIP10 (ENSPCTG00005014182) #31	SH2D3A (ENSPCTG00005013915) #30	VAV1 (ENSPCTG00005012531) #29	ADGRE1 (ENSPCTG00005011511) #28	ENSPCTG00005011386 #25	ENSPCTG00005011253 #21	ENSPCTG00005011009 #22	STXBP2 (ENSPCTG00005010873) #13	PCP2 (ENSPCTG00005010753) #11	PET100 (ENSPCTG00005010637) #12	XAB2 (ENSPCTG00005010585) #14	ENSPCTG00005010540 #15	CAMSAP3 (ENSPCTG00005010103) #15	CLEC4G (ENSPCTG00005009998)	ENSPCTG00005009893	EVI5L (ENSPCTG00005009695)	LRRC8E (ENSPCTG00005009643)	MAP2K7 (ENSPCTG00005009582)	TGFBR3L (ENSPCTG00005009507)	SNAPC2 (ENSPCTG00005009448)	CTXN1 (ENSPCTG00005009430)	TIMM44 (ENSPCTG00005009378)
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000161836	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844.d #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Dolphin	MODERN SPECIES	260																INSR (ENSTTRG00000009054) #22	ENSTTRG00000009019 #24
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000161836	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844.d #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT00940000157061.b	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000161836	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844.d #24	ENSGT00950000183005.b.c.b #25	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT00940000157061.b	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a
Beluga whale	MODERN SPECIES	62	TRAPPC5 (ENSDLEG00000016930) #8	MCEMP1 (ENSDLEG00000016940) #9	RETN (ENSDLEG00000016946)	STXBP2 (ENSDLEG00000016958) #13	PCP2 (ENSDLEG00000016972) #11	PET100 (ENSDLEG00000016982) #12	XAB2 (ENSDLEG00000017018) #14	CAMSAP3 (ENSDLEG00000017222) #15	PNPLA6 (ENSDLEG00000017320) #16	MCOLN1 (ENSDLEG00000017466) #17	ZNF358 (ENSDLEG00000017539) #18	ENSDLEG00000017554 #19	PEX11G (ENSDLEG00000017598) #20	ARHGEF18 (ENSDLEG00000017620) #21	ENSDLEG00000017661	ENSDLEG00000017679 #22	ENSDLEG00000017691 #24	ENSDLEG00000017698 #25	ADGRE1 (ENSDLEG00000017725) #28	ENSDLEG00000017772 #29	SH2D3A (ENSDLEG00000013440) #30	TRIP10 (ENSDLEG00000013465) #31	GPR108 (ENSDLEG00000013487) #32	C3 (ENSDLEG00000013524) #33	TNFSF14 (ENSDLEG00000013733) #34	CD70 (ENSDLEG00000013745) #35	ENSDLEG00000013797	ENSDLEG00000013807 #36	TUBB4A (ENSDLEG00000013810) #37	ENSDLEG00000013828	ENSDLEG00000013892
Narwhal	MODERN SPECIES	298	CLEC4G (ENSMMNG00015018814)	TRAPPC5 (ENSMMNG00015018788) #8	ENSMMNG00015018767 #9	RETN (ENSMMNG00015018723)	STXBP2 (ENSMMNG00015018675) #13	PCP2 (ENSMMNG00015018629) #11	PET100 (ENSMMNG00015018568) #12	XAB2 (ENSMMNG00015018495) #14	CAMSAP3 (ENSMMNG00015018439) #15	PNPLA6 (ENSMMNG00015018069) #16	MCOLN1 (ENSMMNG00015017901) #17	ZNF358 (ENSMMNG00015017875) #18	ENSMMNG00015017815 #19	PEX11G (ENSMMNG00015017778) #20	ARHGEF18 (ENSMMNG00015017706) #21	INSR (ENSMMNG00015017616) #22	ENSMMNG00015017548 #24	ENSMMNG00015017521 #25	ADGRE1 (ENSMMNG00015017131) #28	VAV1 (ENSMMNG00015016847) #29	SH2D3A (ENSMMNG00015016722) #30	TRIP10 (ENSMMNG00015016642) #31	GPR108 (ENSMMNG00015016574) #32	C3 (ENSMMNG00015016478) #33	ENSMMNG00015016434	TNFSF14 (ENSMMNG00015016417) #34	CD70 (ENSMMNG00015016394) #35	TNFSF9 (ENSMMNG00015016367) #36	TUBB4A (ENSMMNG00015016340) #37	DENND1C (ENSMMNG00015016214)	CRB3 (ENSMMNG00015016166)
Vaquita	MODERN SPECIES	14	CLEC4G (ENSPSNG00000009956)	TRAPPC5 (ENSPSNG00000009905) #8	ENSPSNG00000009724 #9	RETN (ENSPSNG00000009634)	STXBP2 (ENSPSNG00000009550) #13	PCP2 (ENSPSNG00000009463) #11	PET100 (ENSPSNG00000009386) #12	XAB2 (ENSPSNG00000009291) #14	CAMSAP3 (ENSPSNG00000009215) #15	PNPLA6 (ENSPSNG00000009051) #16	MCOLN1 (ENSPSNG00000008932) #17	ZNF358 (ENSPSNG00000008912) #18	ENSPSNG00000008826 #19	PEX11G (ENSPSNG00000008789) #20	ARHGEF18 (ENSPSNG00000008281) #21	INSR (ENSPSNG00000007930) #22	ENSPSNG00000007855 #24	ENSPSNG00000007810 #25	ADGRE1 (ENSPSNG00000007315) #28	VAV1 (ENSPSNG00000006761) #29	SH2D3A (ENSPSNG00000006525) #30	TRIP10 (ENSPSNG00000006457) #31	GPR108 (ENSPSNG00000006373) #32	C3 (ENSPSNG00000006189) #33	ENSPSNG00000006157	TNFSF14 (ENSPSNG00000006140) #34	ENSPSNG00000006109 #35	ENSPSNG00000006095 #36	TUBB4A (ENSPSNG00000005996) #37	DENND1C (ENSPSNG00000019480)	CRB3 (ENSPSNG00000019435)
Blue whale	MODERN SPECIES	14	ENSBMSG00010000390 #7	TRAPPC5 (ENSBMSG00010000411) #8	ENSBMSG00010000434 #9	RETN (ENSBMSG00010000459)	STXBP2 (ENSBMSG00010000585) #13	PCP2 (ENSBMSG00010000725) #11	PET100 (ENSBMSG00010000766) #12	XAB2 (ENSBMSG00010000808) #14	CAMSAP3 (ENSBMSG00010000851) #15	PNPLA6 (ENSBMSG00010001000) #16	MCOLN1 (ENSBMSG00010001242) #17	ZNF358 (ENSBMSG00010001278) #18	ENSBMSG00010001293 #19	PEX11G (ENSBMSG00010001311) #20	ARHGEF18 (ENSBMSG00010001356) #21	INSR (ENSBMSG00010001431) #22	ENSBMSG00010001459 #25	ADGRE1 (ENSBMSG00010001551) #28	VAV1 (ENSBMSG00010002016) #29	SH2D3A (ENSBMSG00010002526) #30	TRIP10 (ENSBMSG00010002548) #31	GPR108 (ENSBMSG00010002591) #32	C3 (ENSBMSG00010002651) #33	TNFSF14 (ENSBMSG00010002703) #34	CD70 (ENSBMSG00010002710) #35	TNFSF9 (ENSBMSG00010002721) #36	TUBB4A (ENSBMSG00010002735) #37	DENND1C (ENSBMSG00010002755)	CRB3 (ENSBMSG00010002780)	SLC25A23 (ENSBMSG00010002792)	SLC25A41 (ENSBMSG00010002804)
Pecora	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b.`b #25	ENSGT00940000160844 #24	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315	ENSGT00390000007170	ENSGT00940000158145	ENSGT00390000008201
Yarkand deer	MODERN SPECIES	32	FCER2 (ENSCHYG00000007716) #7	ENSCHYG00000007669 #8	ENSCHYG00000007641 #9	RETN (ENSCHYG00000007617)	STXBP2 (ENSCHYG00000007497) #13	PCP2 (ENSCHYG00000007430) #11	PET100 (ENSCHYG00000007352) #12	XAB2 (ENSCHYG00000007242) #14	CAMSAP3 (ENSCHYG00000007002) #15	PNPLA6 (ENSCHYG00000006198) #16	MCOLN1 (ENSCHYG00000005973) #17	ZNF358 (ENSCHYG00000005940) #18	TEX45 (ENSCHYG00000005888) #19	PEX11G (ENSCHYG00000005839) #20	ARHGEF18 (ENSCHYG00000005618) #21	INSR (ENSCHYG00000005493) #22	ENSCHYG00000005469 #25	ZNF558 (ENSCHYG00000005424) #24	ENSCHYG00000005386	ACP5 (ENSCHYG00000005363)	ELOF1 (ENSCHYG00000005252)	CNN1 (ENSCHYG00000005195)	ECSIT (ENSCHYG00000005087)	ZNF653 (ENSCHYG00000005029)	ELAVL3 (ENSCHYG00000005009)	PRKCSH (ENSCHYG00000004925)	ODAD3 (ENSCHYG00000003947)	EPOR (ENSCHYG00000003869)	SWSAP1 (ENSCHYG00000003852)	PLPPR2 (ENSCHYG00000003822)	CCDC159 (ENSCHYG00000003786)
Percora_a	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b.`b #25	ENSGT00940000160844 #24	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315	ENSGT00390000007170	ENSGT00940000158145
Bovidae	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00730000111029.e.b	ENSGT00950000183005.b.c.b.`b #25	ENSGT00940000160844 #24	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315	ENSGT00390000007170
Caprinae	ANCESTRAL SPECIES	3	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000154431.e.a.a.a.a.b	ENSGT00730000111029.e.b	ENSGT00950000183005.b.c.b.`b #25	ENSGT00940000160844 #24	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315
Goat	MODERN SPECIES	26	NDUFB7 (ENSCHIG00000013480)	TECR (ENSCHIG00000020365)	ADGRE3 (ENSCHIG00000027221)	ZNF333 (ENSCHIG00000014600)	ENSCHIG00000020226	ENSCHIG00000025309 #11	XAB2 (ENSCHIG00000011512) #14	CAMSAP3 (ENSCHIG00000006791) #15	PNPLA6 (ENSCHIG00000012296) #16	MCOLN1 (ENSCHIG00000004859) #17	ZNF358 (ENSCHIG00000009326) #18	TEX45 (ENSCHIG00000021310) #19	PEX11G (ENSCHIG00000008993) #20	ARHGEF18 (ENSCHIG00000014970) #21	ENSCHIG00000013820	INSR (ENSCHIG00000014171) #22	ENSCHIG00000019523	ZNF558 (ENSCHIG00000025659) #24	ENSCHIG00000026095	ACP5 (ENSCHIG00000014322)	ELOF1 (ENSCHIG00000012527)	CNN1 (ENSCHIG00000019758)	ECSIT (ENSCHIG00000021558)	ZNF653 (ENSCHIG00000012969)	ELAVL3 (ENSCHIG00000003436)	PRKCSH (ENSCHIG00000013274)	RGL3 (ENSCHIG00000017717)	EPOR (ENSCHIG00000008595)	SWSAP1 (ENSCHIG00000010252)	PLPPR2 (ENSCHIG00000008665)	CCDC159 (ENSCHIG00000025060)
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020009935	ENSOARG00020009851 #7	ENSOARG00020009809 #8	ENSOARG00020009725 #9	RETN (ENSOARG00020009710)	STXBP2 (ENSOARG00020009628) #13	PCP2 (ENSOARG00020009522) #11	PET100 (ENSOARG00020009496) #12	XAB2 (ENSOARG00020009413) #14	PNPLA6 (ENSOARG00020008560) #16	MCOLN1 (ENSOARG00020008470) #17	ZNF358 (ENSOARG00020008446) #18	TEX45 (ENSOARG00020008365) #19	PEX11G (ENSOARG00020008293) #20	ARHGEF18 (ENSOARG00020008034) #21	INSR (ENSOARG00020007624) #22	ENSOARG00020007582 #25	ZNF558 (ENSOARG00020007505) #24	ACP5 (ENSOARG00020007452)	ELOF1 (ENSOARG00020007341)	CNN1 (ENSOARG00020007271)	ECSIT (ENSOARG00020007078)	ZNF653 (ENSOARG00020006974)	ELAVL3 (ENSOARG00020006849)	PRKCSH (ENSOARG00020006800)	ODAD3 (ENSOARG00020009175)	RGL3 (ENSOARG00020008871)	EPOR (ENSOARG00020008807)	SWSAP1 (ENSOARG00020008767)	PLPPR2 (ENSOARG00020008676)	CCDC159 (ENSOARG00020008591)
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b.`b #25	ENSGT00730000111029.e.b	ENSGT00940000160844 #24	ENSGT00950000183069.b	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315
Bos	ANCESTRAL SPECIES	3	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884.c.a #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b.`b #25	ENSGT00730000111029.e.b	ENSGT00940000160844 #24	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315	ENSGT00390000007170
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884.c.a #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b.`b #25	ENSGT00730000111029.e.b	ENSGT00940000160844 #24	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315	ENSGT00390000007170
Cow	MODERN SPECIES	26	FCER2 (ENSBTAG00000004270) #7	TRAPPC5 (ENSBTAG00000004268) #8	MCEMP1 (ENSBTAG00000004714) #9	RETN (ENSBTAG00000004716)	STXBP2 (ENSBTAG00000009178) #13	PCP2 (ENSBTAG00000008906) #11	PET100 (ENSBTAG00000048824) #12	XAB2 (ENSBTAG00000011360) #14	CAMSAP3 (ENSBTAG00000011356) #15	PNPLA6 (ENSBTAG00000032137) #16	MCOLN1 (ENSBTAG00000005592) #17	ZNF358 (ENSBTAG00000046837) #18	TEX45 (ENSBTAG00000002629) #19	PEX11G (ENSBTAG00000018894) #20	ARHGEF18 (ENSBTAG00000040507) #21	INSR (ENSBTAG00000012687) #22	ENSBTAG00000047612 #25	ENSBTAG00000046336	ZNF557 (ENSBTAG00000030929) #24	ENSBTAG00000038680	ACP5 (ENSBTAG00000004826)	ELOF1 (ENSBTAG00000038151)	CNN1 (ENSBTAG00000011207)	ECSIT (ENSBTAG00000015049)	ZNF653 (ENSBTAG00000014415)	ELAVL3 (ENSBTAG00000014412)	PRKCSH (ENSBTAG00000008202)	ODAD3 (ENSBTAG00000008201)	RGL3 (ENSBTAG00000008198)	EPOR (ENSBTAG00000008197)	SWSAP1 (ENSBTAG00000008196)
Hybrid Bos Indicus	MODERN SPECIES	26	ENSBIXG00005009437 #7	TRAPPC5 (ENSBIXG00005009421) #8	ENSBIXG00005009407 #9	ENSBIXG00005009395	STXBP2 (ENSBIXG00005009382) #13	ENSBIXG00005009355 #12	PCP2 (ENSBIXG00005009330) #11	XAB2 (ENSBIXG00005009311) #14	CAMSAP3 (ENSBIXG00005000457) #15	PNPLA6 (ENSBIXG00005009237) #16	MCOLN1 (ENSBIXG00005009077) #17	ZNF358 (ENSBIXG00005000371) #18	TEX45 (ENSBIXG00005005271) #19	PEX11G (ENSBIXG00005001595) #20	ARHGEF18 (ENSBIXG00005029209) #21	INSR (ENSBIXG00005001709) #22	ENSBIXG00005001771 #25	ENSBIXG00005001780	ZNF558 (ENSBIXG00005001808) #24	ENSBIXG00005029129	ACP5 (ENSBIXG00005029121)	ENSBIXG00005005151	CNN1 (ENSBIXG00005005140)	ECSIT (ENSBIXG00005002005)	ZNF653 (ENSBIXG00005007608)	ELAVL3 (ENSBIXG00005005114)	PRKCSH (ENSBIXG00005029013)	ODAD3 (ENSBIXG00005005087)	RGL3 (ENSBIXG00005005047)	EPOR (ENSBIXG00005028886)	SWSAP1 (ENSBIXG00005002261)
Bos_a	ANCESTRAL SPECIES	2	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884.c.a #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b.`b #25	ENSGT00730000111029.e.b	ENSGT00940000160844 #24	ENSGT00940000154431.e.a.a.b.a.c	ENSGT00390000016735	ENSGT00390000000053	ENSGT00940000159680	ENSGT00390000005147	ENSGT00940000160257	ENSGT00940000160389	ENSGT00510000047770.c.a	ENSGT00940000153116.C.b	ENSGT00940000161935	ENSGT00940000160315	ENSGT00390000007170
Wild yak	MODERN SPECIES	347	ENSBMUG00000025977 #7	ENSBMUG00000025982 #9	RETN (ENSBMUG00000025984)	STXBP2 (ENSBMUG00000025989) #13	PCP2 (ENSBMUG00000025992) #11	ENSBMUG00000025997 #12	XAB2 (ENSBMUG00000025998) #14	ENSBMUG00000026000 #15	PNPLA6 (ENSBMUG00000026008) #16	MCOLN1 (ENSBMUG00000026020) #17	ENSBMUG00000026024 #18	ENSBMUG00000026027 #19	PEX11G (ENSBMUG00000026029) #20	ARHGEF18 (ENSBMUG00000026030) #21	ENSBMUG00000026032	INSR (ENSBMUG00000026033) #22	ENSBMUG00000026035 #25	ENSBMUG00000026036	ZNF558 (ENSBMUG00000026040) #24	ENSBMUG00000026043	ENSBMUG00000026045	ENSBMUG00000026048	ACP5 (ENSBMUG00000026050)	ELOF1 (ENSBMUG00000026057)	CNN1 (ENSBMUG00000026059)	ECSIT (ENSBMUG00000026061)	ZNF653 (ENSBMUG00000026068)	ELAVL3 (ENSBMUG00000026073)	PRKCSH (ENSBMUG00000000129)	ODAD3 (ENSBMUG00000000250)	RGL3 (ENSBMUG00000000298)
Domestic yak	MODERN SPECIES	27	TRAPPC5 (ENSBGRG00000019065) #8	ENSBGRG00000018955 #9	ENSBGRG00000018862	STXBP2 (ENSBGRG00000018414) #13	PCP2 (ENSBGRG00000018290) #11	ENSBGRG00000018074 #12	XAB2 (ENSBGRG00000017678) #14	ENSBGRG00000017610 #15	ENSBGRG00000017526 #15	PNPLA6 (ENSBGRG00000016196) #16	MCOLN1 (ENSBGRG00000015800) #17	ZNF358 (ENSBGRG00000015732) #18	TEX45 (ENSBGRG00000015591) #19	PEX11G (ENSBGRG00000015477) #20	ARHGEF18 (ENSBGRG00000014851) #21	INSR (ENSBGRG00000014314) #22	ENSBGRG00000014264 #25	ENSBGRG00000014240	ZNF558 (ENSBGRG00000014085) #24	ENSBGRG00000014054	ACP5 (ENSBGRG00000013885)	ELOF1 (ENSBGRG00000013781)	CNN1 (ENSBGRG00000013580)	ECSIT (ENSBGRG00000013448)	ZNF653 (ENSBGRG00000013329)	ELAVL3 (ENSBGRG00000013231)	PRKCSH (ENSBGRG00000013054)	ODAD3 (ENSBGRG00000012691)	ENSBGRG00000012601	EPOR (ENSBGRG00000012531)	SWSAP1 (ENSBGRG00000012516)
American bison	MODERN SPECIES	3349	CLEC4G (ENSBBBG00000019038)	FCER2 (ENSBBBG00000004855) #7	ENSBBBG00000018964 #9	RETN (ENSBBBG00000018950)	STXBP2 (ENSBBBG00000018941) #13	PCP2 (ENSBBBG00000004777) #11	PET100 (ENSBBBG00000018886) #12	XAB2 (ENSBBBG00000018857) #14	CAMSAP3 (ENSBBBG00000004734) #15	PNPLA6 (ENSBBBG00000018732) #16	MCOLN1 (ENSBBBG00000004511) #17	ZNF358 (ENSBBBG00000004503) #18	TEX45 (ENSBBBG00000004501) #19	PEX11G (ENSBBBG00000018399) #20	ARHGEF18 (ENSBBBG00000004493) #21	INSR (ENSBBBG00000018333) #22	ENSBBBG00000018257 #25	ENSBBBG00000018240	ZNF558 (ENSBBBG00000008764) #24	ENSBBBG00000018189	ENSBBBG00000004463	ACP5 (ENSBBBG00000018149)	ELOF1 (ENSBBBG00000018120)	CNN1 (ENSBBBG00000018096)	ENSBBBG00000018064	ZNF653 (ENSBBBG00000018040)	ELAVL3 (ENSBBBG00000007581)	PRKCSH (ENSBBBG00000018010)	ODAD3 (ENSBBBG00000017977)	RGL3 (ENSBBBG00000017909)	EPOR (ENSBBBG00000017814)
Siberian musk deer	MODERN SPECIES	99	ENSMMSG00000002717 #9	RETN (ENSMMSG00000002689)	STXBP2 (ENSMMSG00000002653) #13	PCP2 (ENSMMSG00000002624) #11	PET100 (ENSMMSG00000002583) #12	XAB2 (ENSMMSG00000002541) #14	CAMSAP3 (ENSMMSG00000002454) #15	PNPLA6 (ENSMMSG00000002007) #16	MCOLN1 (ENSMMSG00000001946) #17	ZNF358 (ENSMMSG00000001933) #18	TEX45 (ENSMMSG00000001917) #19	PEX11G (ENSMMSG00000001906) #20	ARHGEF18 (ENSMMSG00000001884) #21	ENSMMSG00000001865	ENSMMSG00000001857	INSR (ENSMMSG00000001802) #22	ENSMMSG00000001779 #25	ENSMMSG00000001771	ZNF558 (ENSMMSG00000001749) #24	ENSMMSG00000001738	ENSMMSG00000001726	ACP5 (ENSMMSG00000001717)	ENSMMSG00000001700	CNN1 (ENSMMSG00000001681)	ECSIT (ENSMMSG00000001650)	ZNF653 (ENSMMSG00000001627)	ELAVL3 (ENSMMSG00000001618)	PRKCSH (ENSMMSG00000001600)	ODAD3 (ENSMMSG00000001498)	RGL3 (ENSMMSG00000001453)	EPOR (ENSMMSG00000001392)
Camelidae	ANCESTRAL SPECIES	61	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00950000183005.b.c.b #25	ENSGT00940000154431.e.a.a.a	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Arabian camel	MODERN SPECIES	14	ENSCDRG00005014486 #7	ENSCDRG00005014547 #9	TRAPPC5 (ENSCDRG00005014599) #8	RETN (ENSCDRG00005014619)	STXBP2 (ENSCDRG00005014709) #13	PCP2 (ENSCDRG00005015159) #11	PET100 (ENSCDRG00005015254) #12	XAB2 (ENSCDRG00005015338) #14	CAMSAP3 (ENSCDRG00005015416) #15	PNPLA6 (ENSCDRG00005015644) #16	MCOLN1 (ENSCDRG00005016454) #17	ZNF358 (ENSCDRG00005016504) #18	TEX45 (ENSCDRG00005016523) #19	PEX11G (ENSCDRG00005016590) #20	ARHGEF18 (ENSCDRG00005016630) #21	INSR (ENSCDRG00005016879) #22	ENSCDRG00005017114 #25	ENSCDRG00005017145	ENSCDRG00005017166	ENSCDRG00005017246	ADGRE1 (ENSCDRG00005017351) #28	VAV1 (ENSCDRG00005017664) #29	SH2D3A (ENSCDRG00005017906) #30	TRIP10 (ENSCDRG00005017930) #31	GPR108 (ENSCDRG00005017978) #32	C3 (ENSCDRG00005018821) #33	TNFSF14 (ENSCDRG00005021938) #34	CD70 (ENSCDRG00005021939) #35	TUBB4A (ENSCDRG00005021940) #37	DENND1C (ENSCDRG00005021941)	CRB3 (ENSCDRG00005021942)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00940000163677.a.b.a.a.b	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154619.h	ENSGT00940000154131	ENSGT00940000163945	ENSGT00940000154619.g.a.a	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00940000163677.a.b.a.a.b	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783	ENSGT00940000164306
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783	ENSGT00940000164306
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044.e	ENSGT00940000166764	ENSGT00940000163044.f	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000162532	ENSGT00940000154619.g.a.a	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162241	ENSGT00940000163783
Ursidae	ANCESTRAL SPECIES	20	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045.h #13	ENSGT00940000162025.b #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044.f	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000162532	ENSGT00940000154619.g.a.a	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000162241	ENSGT00940000163783	ENSGT00940000164306	ENSGT00940000153686	ENSGT00940000163651
Ursus	ANCESTRAL SPECIES																	ENSGT00940000155404 #22
Polar bear	MODERN SPECIES	276																INSR (ENSUMAG00000013401) #22
American black bear	MODERN SPECIES	3698																INSR (ENSUAMG00000017498) #22
Giant Panda	MODERN SPECIES	14	CLEC4G (ENSAMEG00000008566)	FCER2 (ENSAMEG00000008548) #7	TRAPPC5 (ENSAMEG00000026028) #8	ENSAMEG00000008547 #9	RETN (ENSAMEG00000008546)	STXBP2 (ENSAMEG00000008533) #13	PCP2 (ENSAMEG00000008527) #11	PET100 (ENSAMEG00000008524) #12	XAB2 (ENSAMEG00000008491) #14	CAMSAP3 (ENSAMEG00000008479) #15	PNPLA6 (ENSAMEG00000008340) #16	MCOLN1 (ENSAMEG00000008287) #17	TEX45 (ENSAMEG00000008281) #19	PEX11G (ENSAMEG00000008275) #20	ARHGEF18 (ENSAMEG00000008269) #21	ENSAMEG00000008175 #22	ENSAMEG00000008173 #24	ENSAMEG00000024023 ##25	ENSAMEG00000008168	ENSAMEG00000018685	ENSAMEG00000026059	ENSAMEG00000028534	ENSAMEG00000029547	ENSAMEG00000028978	ENSAMEG00000024494	ENSAMEG00000029012	ENSAMEG00000025705	ENSAMEG00000025440	ENSAMEG00000026692	ENSAMEG00000018477	ENSAMEG00000019394
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000155404 #22	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044.e	ENSGT00940000166764	ENSGT00940000163044.f	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a.c	ENSGT00940000154619.g.a.a.d	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241
American mink	MODERN SPECIES	175	EVI5L (ENSNVIG00000017850)	ENSNVIG00000018065	CLEC4G (ENSNVIG00000018070)	ENSNVIG00000018107 #9	STXBP2 (ENSNVIG00000018114) #13	PCP2 (ENSNVIG00000018143) #11	PET100 (ENSNVIG00000018170) #12	XAB2 (ENSNVIG00000018203) #14	CAMSAP3 (ENSNVIG00000018253) #15	PNPLA6 (ENSNVIG00000018440) #16	MCOLN1 (ENSNVIG00000018507) #17	ZNF358 (ENSNVIG00000018675) #18	ENSNVIG00000018678 #19	PEX11G (ENSNVIG00000018704) #20	ARHGEF18 (ENSNVIG00000018720) #21	INSR (ENSNVIG00000018756) #22	ZNF558 (ENSNVIG00000018788) #24	MBD3L1 (ENSNVIG00000018815) ##25	ENSNVIG00000018821	ENSNVIG00000018841	ENSNVIG00000018844	OR7G2 (ENSNVIG00000018846)	ENSNVIG00000018865	ENSNVIG00000018897
Ferret	MODERN SPECIES	326	FCER2 (ENSMPUG00000008140) #7	TRAPPC5 (ENSMPUG00000008190) #8	ENSMPUG00000008197 #9	RETN (ENSMPUG00000008210)	STXBP2 (ENSMPUG00000008225) #13	PCP2 (ENSMPUG00000008238) #11	XAB2 (ENSMPUG00000008256) #14	CAMSAP3 (ENSMPUG00000008265) #15	PNPLA6 (ENSMPUG00000008321) #16	ZNF358 (ENSMPUG00000008340) #18	ENSMPUG00000008347	ENSMPUG00000008353 #19	PEX11G (ENSMPUG00000008366) #20	ENSMPUG00000008395	ARHGEF18 (ENSMPUG00000008399) #21	INSR (ENSMPUG00000008446) #22	ZNF558 (ENSMPUG00000008460) #24	ENSMPUG00000008467	ENSMPUG00000008583	ENSMPUG00000008612	ENSMPUG00000019710	ENSMPUG00000019711	ENSMPUG00000019712	ENSMPUG00000019713	ENSMPUG00000008620	ENSMPUG00000019714	ENSMPUG00000019715	ENSMPUG00000008627	ENSMPUG00000019716	ENSMPUG00000019717	OR7G3 (ENSMPUG00000019718)
Canidae	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884.a #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182987.c.a.a.i.b	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a.f	ENSGT00940000154619.g.a.a.e	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884.a #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000182987.c.a.a.i.b	ENSGT00940000160844 #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a.f	ENSGT00940000154619.g.a.a.e	ENSGT00940000154619.g.a.b.a	ENSGT00940000154619.g.a.b.b	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241
Dog	MODERN SPECIES	12	CLEC4G (ENSCAFG00845028231)	FCER2 (ENSCAFG00845028136) #7	TRAPPC5 (ENSCAFG00845028079) #8	ENSCAFG00845027907 #9	RETN (ENSCAFG00845027860)	STXBP2 (ENSCAFG00845027713) #13	PCP2 (ENSCAFG00845027633) #11	PET100 (ENSCAFG00845027588) #12	XAB2 (ENSCAFG00845027506) #14	CAMSAP3 (ENSCAFG00845027077) #15	PNPLA6 (ENSCAFG00845025938) #16	MCOLN1 (ENSCAFG00845025665) #17	PEX11G (ENSCAFG00845025586) #20	ZNF358 (ENSCAFG00845025392) #18	ENSCAFG00845024877 #21	INSR (ENSCAFG00845024484) #22	ENSCAFG00845024420	ENSCAFG00845024359 #24	ENSCAFG00845024330 ##25	ENSCAFG00845024285	OR1M1B (ENSCAFG00845024254)	OR1M1 (ENSCAFG00845024226)	OR7G6 (ENSCAFG00845024180)	OR7G7 (ENSCAFG00845024152)	OR7G13 (ENSCAFG00845024127)	OR7G8 (ENSCAFG00845024099)	OR7G14 (ENSCAFG00845024061)	OR08C06 (ENSCAFG00845024030)	ENSCAFG00845024012	OR7G3 (ENSCAFG00845023993)	OR7G10 (ENSCAFG00845023956)
Dingo	MODERN SPECIES	112	TRAPPC5 (ENSCAFG00020022875) #8	ENSCAFG00020022879 #9	RETN (ENSCAFG00020022880)	STXBP2 (ENSCAFG00020022883) #13	PCP2 (ENSCAFG00020022884) #11	ENSCAFG00020022885 #12	XAB2 (ENSCAFG00020022886) #14	CAMSAP3 (ENSCAFG00020022887) #15	PNPLA6 (ENSCAFG00020022912) #16	MCOLN1 (ENSCAFG00020022920) #17	ZNF358 (ENSCAFG00020022933) #18	ENSCAFG00020022935 #19	PEX11G (ENSCAFG00020022939) #20	ARHGEF18 (ENSCAFG00020022941) #21	ENSCAFG00020022945	INSR (ENSCAFG00020023010) #22	ENSCAFG00020023323	ENSCAFG00020023329 #24	MBD3L1 (ENSCAFG00020023331) ##25	ENSCAFG00020023335	ENSCAFG00020023355	ENSCAFG00020023359	ENSCAFG00020023361	ENSCAFG00020023365	ENSCAFG00020023368	ENSCAFG00020023370	OR7G3 (ENSCAFG00020023372)	ZNF699 (ENSCAFG00020023385)	ENSCAFG00020023392	ZNF317 (ENSCAFG00020023398)	ENSCAFG00020023399
Red fox	MODERN SPECIES	212	ENSVVUG00000027080 #9	ENSVVUG00000027082 #8	RETN (ENSVVUG00000027083)	STXBP2 (ENSVVUG00000027084) #13	PCP2 (ENSVVUG00000027086) #11	PET100 (ENSVVUG00000027090) #12	XAB2 (ENSVVUG00000027092) #14	CAMSAP3 (ENSVVUG00000027095) #15	PNPLA6 (ENSVVUG00000027123) #16	MCOLN1 (ENSVVUG00000028132) #17	ZNF358 (ENSVVUG00000028228) #18	TEX45 (ENSVVUG00000028234) #19	PEX11G (ENSVVUG00000028238) #20	ARHGEF18 (ENSVVUG00000028242) #21	ENSVVUG00000028248	INSR (ENSVVUG00000028254) #22	ENSVVUG00000028259	ENSVVUG00000028260	ENSVVUG00000028261 #24	MBD3L1 (ENSVVUG00000028262) ##25	ENSVVUG00000028263	ENSVVUG00000028272	ENSVVUG00000028273	ENSVVUG00000028274	ENSVVUG00000028275	ENSVVUG00000028278	ENSVVUG00000028279	ENSVVUG00000028281	ENSVVUG00000028283	ENSVVUG00000028284	ZNF699 (ENSVVUG00000028285)
Felidae	ANCESTRAL SPECIES	21	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00940000163677.a.b.a.a.b	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.e.b #24	ENSGT00940000160844.e.a #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a.h	ENSGT00940000154619.g.a.a.g	ENSGT00940000154619.g.a.b.a	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783
Panthera	ANCESTRAL SPECIES	15	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.e.b #24	ENSGT00940000160844.e.a #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a.h	ENSGT00940000154619.g.a.a.g	ENSGT00940000154619.g.a.b.a	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241	ENSGT00940000163783
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000160844.f #24	ENSGT00940000160844.e.b #24	ENSGT00940000160844.e.a #24	ENSGT00950000183005.b.c.a ##25	ENSGT00440000039287	ENSGT00940000163044	ENSGT00940000166764	ENSGT00940000154131	ENSGT00940000154619.h	ENSGT00940000154619.g.a.a.h	ENSGT00940000154619.g.a.a.g	ENSGT00940000154619.g.a.b.a	ENSGT00940000163146	ENSGT00940000162532	ENSGT00940000162241
leopard	MODERN SPECIES	110	ENSPPRG00000010164	CLEC4G (ENSPPRG00000010388)	FCER2 (ENSPPRG00000012302) #7	RETN (ENSPPRG00000013045)	STXBP2 (ENSPPRG00000015733) #13	PCP2 (ENSPPRG00000016206) #11	PET100 (ENSPPRG00000017388) #12	XAB2 (ENSPPRG00000020860) #14	CAMSAP3 (ENSPPRG00000024695) #15	PNPLA6 (ENSPPRG00000003838) #16	MCOLN1 (ENSPPRG00000005117) #17	TEX45 (ENSPPRG00000005542) #19	PEX11G (ENSPPRG00000005684) #20	ARHGEF18 (ENSPPRG00000007823) #21	ENSPPRG00000008300	INSR (ENSPPRG00000009528) #22	ENSPPRG00000009993 #24	ENSPPRG00000010315 #24	MBD3L1 (ENSPPRG00000015901) ##25	ENSPPRG00000010659	ENSPPRG00000015914	ENSPPRG00000015928	ENSPPRG00000011291	ENSPPRG00000011803	ENSPPRG00000012533	ENSPPRG00000013393	ENSPPRG00000015983	OR7G3 (ENSPPRG00000016010)	ENSPPRG00000016020	ZNF317 (ENSPPRG00000014318)	ENSPPRG00000016056
lion	MODERN SPECIES	2	TRAPPC5 (ENSPLOG00000001688) #8	ENSPLOG00000001703 #9	RETN (ENSPLOG00000001737)	STXBP2 (ENSPLOG00000001774) #13	PCP2 (ENSPLOG00000001833) #11	PET100 (ENSPLOG00000001848) #12	XAB2 (ENSPLOG00000001874) #14	ENSPLOG00000001915	CAMSAP3 (ENSPLOG00000001966) #15	PNPLA6 (ENSPLOG00000002153) #16	MCOLN1 (ENSPLOG00000002317) #17	ZNF358 (ENSPLOG00000002344) #18	ENSPLOG00000002374 #19	PEX11G (ENSPLOG00000002404) #20	ARHGEF18 (ENSPLOG00000002478) #21	INSR (ENSPLOG00000002580) #22	ENSPLOG00000002637 #24	ENSPLOG00000002672	ZNF699 (ENSPLOG00000002685)	ENSPLOG00000002705	ZNF177 (ENSPLOG00000002733)	ENSPLOG00000002758	ENSPLOG00000002786	FBXL12 (ENSPLOG00000002810)	UBL5 (ENSPLOG00000002830)	PIN1 (ENSPLOG00000002853)	OLFM2 (ENSPLOG00000002885)	RDH8 (ENSPLOG00000003040)	SHFL (ENSPLOG00000003064)	ANGPTL6 (ENSPLOG00000003100)	PPAN (ENSPLOG00000003131)
Tiger	MODERN SPECIES	332	LRRC8E (ENSPTIG00000019015)	EVI5L (ENSPTIG00000020212)	ENSPTIG00000010025	CLEC4G (ENSPTIG00000010368)	TRAPPC5 (ENSPTIG00000011386) #8	ENSPTIG00000011676 #9	STXBP2 (ENSPTIG00000013956) #13	PCP2 (ENSPTIG00000016978) #11	PET100 (ENSPTIG00000017990) #12	ENSPTIG00000018710 #14	PNPLA6 (ENSPTIG00000019656) #16	MCOLN1 (ENSPTIG00000016883) #17	ENSPTIG00000017791 #19	PEX11G (ENSPTIG00000018197) #20	ENSPTIG00000000533	INSR (ENSPTIG00000007440) #22	OR7G3 (ENSPTIG00000001820)	ENSPTIG00000001857	ENSPTIG00000017443	ENSPTIG00000018971	ENSPTIG00000020851	ENSPTIG00000001994	ENSPTIG00000002032	ENSPTIG00000021774	MBD3L1 (ENSPTIG00000002103) ##25	ENSPTIG00000021956 #24	ENSPTIG00000022046 #24
Cat	MODERN SPECIES	1	TRAPPC5 (ENSFCAG00000052003) #8	MCEMP1 (ENSFCAG00000041115) #9	RETN (ENSFCAG00000041287)	STXBP2 (ENSFCAG00000001596) #13	PCP2 (ENSFCAG00000001595) #11	PET100 (ENSFCAG00000023931) #12	XAB2 (ENSFCAG00000001594) #14	CAMSAP3 (ENSFCAG00000043275) #15	PNPLA6 (ENSFCAG00000008288) #16	MCOLN1 (ENSFCAG00000008287) #17	ZNF358 (ENSFCAG00000049515) #18	ENSFCAG00000039794	TEX45 (ENSFCAG00000008285) #19	PEX11G (ENSFCAG00000008284) #20	ARHGEF18 (ENSFCAG00000026093) #21	INSR (ENSFCAG00000003030) #22	ZNF558 (ENSFCAG00000042748) #24	MBD3L1 (ENSFCAG00000043402) ##25	ENSFCAG00000018988	ENSFCAG00000042680	ENSFCAG00000030104	ENSFCAG00000026601	ENSFCAG00000026650	ENSFCAG00000033815	ENSFCAG00000047250	ENSFCAG00000052475	ENSFCAG00000025876	OR7G3 (ENSFCAG00000041085)	ENSFCAG00000040525	ZNF317 (ENSFCAG00000005824)	ENSFCAG00000021912
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00940000163677.a.b.a.a.b	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Equus	ANCESTRAL SPECIES	34	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00940000163677.a.b.a.a.b	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069.b.h	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b.`c #33	ENSGT01060000248544.a.a.b.a.a #34	ENSGT00390000006744 #35	ENSGT00390000006244 #36	ENSGT00940000161972 #37	ENSGT00940000161573	ENSGT00950000183101.a.b.a	ENSGT00940000159428
Donkey	MODERN SPECIES	12	TRAPPC5 (ENSEASG00005029951) #8	ENSEASG00005032420 #9	ENSEASG00005025116	STXBP2 (ENSEASG00005014342) #13	PCP2 (ENSEASG00005014335) #11	ENSEASG00005025517 #12	XAB2 (ENSEASG00005013871) #14	CAMSAP3 (ENSEASG00005013830) #15	PNPLA6 (ENSEASG00005013816) #16	MCOLN1 (ENSEASG00005013805) #17	ENSEASG00005036016	ZNF358 (ENSEASG00005013796) #18	TEX45 (ENSEASG00005013791) #19	PEX11G (ENSEASG00005025057) #20	ARHGEF18 (ENSEASG00005013760) #21	INSR (ENSEASG00005013740) #22	ENSEASG00005002163	ENSEASG00005013698	ADGRE1 (ENSEASG00005013682) #28	VAV1 (ENSEASG00005011821) #29	SH2D3A (ENSEASG00005011718) #30	TRIP10 (ENSEASG00005011533) #31	GPR108 (ENSEASG00005011473) #32	ENSEASG00005000728 #33	ENSEASG00005038643 #33	TNFSF14 (ENSEASG00005025378) #34	CD70 (ENSEASG00005000353) #35	TNFSF9 (ENSEASG00005028605) #36	TUBB4A (ENSEASG00005027092) #37	DENND1C (ENSEASG00005000214)	CRB3 (ENSEASG00005030191)
Horse	MODERN SPECIES	28	MCEMP1 (ENSECAG00000037539) #9	RETN (ENSECAG00000016421)	STXBP2 (ENSECAG00000016424) #13	PCP2 (ENSECAG00000006836) #11	PET100 (ENSECAG00000008451) #12	XAB2 (ENSECAG00000010502) #14	CAMSAP3 (ENSECAG00000010533) #15	PNPLA6 (ENSECAG00000012712) #16	MCOLN1 (ENSECAG00000016645) #17	ENSECAG00000034713	ZNF358 (ENSECAG00000035156) #18	TEX45 (ENSECAG00000022297) #19	PEX11G (ENSECAG00000023310) #20	ARHGEF18 (ENSECAG00000039852) #21	ENSECAG00000059814	INSR (ENSECAG00000010127) #22	ENSECAG00000036129	ENSECAG00000015885	ADGRE1 (ENSECAG00000017237) #28	VAV1 (ENSECAG00000014896) #29	SH2D3A (ENSECAG00000012075) #30	TRIP10 (ENSECAG00000017817) #31	GPR108 (ENSECAG00000014466) #32	C3 (ENSECAG00000057145) #33	TNFSF14 (ENSECAG00000017522) #34	ENSECAG00000058070	TNFSF9 (ENSECAG00000022714) #36	TUBB4A (ENSECAG00000037214) #37	DENND1C (ENSECAG00000010964)	CRB3 (ENSECAG00000010143)	SLC25A23 (ENSECAG00000020970)
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Megabat	MODERN SPECIES	2254																INSR (ENSPVAG00000006288) #22
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Microbat	MODERN SPECIES	1545										PNPLA6 (ENSMLUG00000016045) #16	MCOLN1 (ENSMLUG00000016027) #17	ZNF358 (ENSMLUG00000016024) #18	PEX11G (ENSMLUG00000024375) #20	ARHGEF18 (ENSMLUG00000014992) #21	ENSMLUG00000023910	INSR (ENSMLUG00000013806) #22
Greater horseshoe bat	MODERN SPECIES	9	ENSRFEG00010011272 #7	TRAPPC5 (ENSRFEG00010011215) #8	ENSRFEG00010011167 #9	RETN (ENSRFEG00010011115)	STXBP2 (ENSRFEG00010010989) #13	PCP2 (ENSRFEG00010010844) #11	PET100 (ENSRFEG00010010799) #12	XAB2 (ENSRFEG00010010529) #14	CAMSAP3 (ENSRFEG00010010482) #15	PNPLA6 (ENSRFEG00010009840) #16	MCOLN1 (ENSRFEG00010009751) #17	ZNF358 (ENSRFEG00010009723) #18	TEX45 (ENSRFEG00010009635) #19	PEX11G (ENSRFEG00010009599) #20	ARHGEF18 (ENSRFEG00010009296) #21	INSR (ENSRFEG00010009186) #22	ENSRFEG00010009151	ZNF558 (ENSRFEG00010009122) #24	ENSRFEG00010009081	ACTL9 (ENSRFEG00010009051)	OR1M1 (ENSRFEG00010009039)	OR7G1 (ENSRFEG00010009022)	ENSRFEG00010008980	ENSRFEG00010008953	ZNF317 (ENSRFEG00010008918)	STMN4 (ENSRFEG00010008795)	TRIM35 (ENSRFEG00010008680)	ENSRFEG00010008663	FSTL5 (ENSRFEG00010008214)	ENSRFEG00010008133	NAF1 (ENSRFEG00010008095)
Atlantogenata	ANCESTRAL SPECIES	95	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00940000175175	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22
Afrotheria	ANCESTRAL SPECIES	96	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34
Afrotheria_a	ANCESTRAL SPECIES	98	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00950000183069	ENSGT00940000162163	ENSGT00940000161354 #28	ENSGT00940000159125 #29	ENSGT00940000154130.a.a.a #30	ENSGT00950000183047.c.a #31	ENSGT00940000160446 #32	ENSGT00940000154063.C.a.b #33	ENSGT01060000248544.a.a.b.a.a #34
Elephant	MODERN SPECIES	37	FCER2 (ENSLAFG00000028940) #7	TRAPPC5 (ENSLAFG00000005857) #8	ENSLAFG00000027280 #9	RETN (ENSLAFG00000028376)	PCP2 (ENSLAFG00000007547) #11	XAB2 (ENSLAFG00000029703) #14	CAMSAP3 (ENSLAFG00000028540) #15	PNPLA6 (ENSLAFG00000022493) #16	MCOLN1 (ENSLAFG00000012561) #17	ZNF358 (ENSLAFG00000012559) #18	ENSLAFG00000011272 #19	STXBP2 (ENSLAFG00000026499) #13	PEX11G (ENSLAFG00000012547) #20	ENSLAFG00000003537 #21	ENSLAFG00000031719	INSR (ENSLAFG00000009130) #22	ENSLAFG00000032682	ENSLAFG00000027853	ENSLAFG00000029786	ENSLAFG00000025791	ENSLAFG00000004014	ENSLAFG00000028228
Hyrax	MODERN SPECIES	5460																INSR (ENSPCAG00000005113) #22
Tenrec	MODERN SPECIES	6443																INSR (ENSETEG00000017958) #22
Xenarthra	ANCESTRAL SPECIES	124	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00940000175175	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000157375 #21	ENSGT00940000154146.b.b.b	ENSGT00940000155404 #22	ENSGT00940000163044	ENSGT00440000039287	ENSGT00950000183005.b.c.a ##25
Armadillo	MODERN SPECIES	3619	ENSDNOG00000044708 #7	TRAPPC5 (ENSDNOG00000042653) #8	ENSDNOG00000041591 #9	STXBP2 (ENSDNOG00000030959) #13	PCP2 (ENSDNOG00000003545) #11	ENSDNOG00000032409	XAB2 (ENSDNOG00000003533) #14	CAMSAP3 (ENSDNOG00000048382) #15	ENSDNOG00000035809 #16	MCOLN1 (ENSDNOG00000013084) #17	ZNF358 (ENSDNOG00000042842) #18	TEX45 (ENSDNOG00000009141) #19	PEX11G (ENSDNOG00000003141) #20	ARHGEF18 (ENSDNOG00000016290) #21	ENSDNOG00000045665	INSR (ENSDNOG00000048372) #22	OR1M1 (ENSDNOG00000002506)	ENSDNOG00000001756	MBD3L1 (ENSDNOG00000039231) ##25	OR7D2 (ENSDNOG00000042398)	ZNF317 (ENSDNOG00000044751)
Sloth	MODERN SPECIES	5896																ENSCHOG00000006348 #22
Marsupialia	ANCESTRAL SPECIES	16	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000154488.A.b.b.b	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000012041	ENSGT01020000230351.A	ENSGT00390000010194	ENSGT00940000161539	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00390000016776	ENSGT00550000075141	ENSGT00940000154764
Marsupialia_b	ANCESTRAL SPECIES	17	ENSGT00940000162574 #7	ENSGT00390000000976 #8	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000154488.A.b.b.b	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000012041	ENSGT01020000230351.A	ENSGT00390000010194	ENSGT00940000161539	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00390000016776	ENSGT00550000075141	ENSGT00940000154764
Diprotodontia	ANCESTRAL SPECIES	55	ENSGT00940000160666.f	ENSGT00940000162574 #7	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000154488.A.b.b.b	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000012041	ENSGT01020000230351.A	ENSGT00390000010194	ENSGT00940000161539	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00390000016776	ENSGT00550000075141	ENSGT00940000154764
Diprotodontia_a	ANCESTRAL SPECIES	51	ENSGT00940000162574 #7	ENSGT00390000007959 #9	ENSGT00390000016177.e	ENSGT00940000160045 #13	ENSGT00940000162025 #11	ENSGT00390000016884 #12	ENSGT00550000075140 #14	ENSGT00950000182975.a.b #15	ENSGT00940000159130 #16	ENSGT00950000183036.b #17	ENSGT00940000162948 #18	ENSGT00390000014215 #19	ENSGT00390000000427 #20	ENSGT00940000161592.i.a.a	ENSGT00940000154488.A.b.b.b	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000012041	ENSGT01020000230351.A	ENSGT00390000010194	ENSGT00940000161539	ENSGT00390000004796	ENSGT00390000016767	ENSGT00950000183078.b.b	ENSGT00400000022306	ENSGT00940000160709	ENSGT00940000156599	ENSGT00390000016776	ENSGT00550000075141	ENSGT00940000154764
Common wonbat	MODERN SPECIES	1126	ENSVURG00010000693 #7	ENSVURG00010000732	ENSVURG00010000743	ENSVURG00010000757	STXBP2 (ENSVURG00010000778) #13	ENSVURG00010000819 #11	PET100 (ENSVURG00010000844) #12	XAB2 (ENSVURG00010000854) #14	CAMSAP3 (ENSVURG00010000892) #15	PNPLA6 (ENSVURG00010000927) #16	MCOLN1 (ENSVURG00010000960) #17	ENSVURG00010000983 #18	PEX11G (ENSVURG00010001004) #20	ENSVURG00010001012	ENSVURG00010001018	INSR (ENSVURG00010001042) #22	ARHGEF18 (ENSVURG00010001121) #21	ENSVURG00010001228	P2RX2 (ENSVURG00010001262)	POLE (ENSVURG00010001541)	PXMP2 (ENSVURG00010002555)	PGAM5 (ENSVURG00010002564)	ANKLE2 (ENSVURG00010002583)	GOLGA3 (ENSVURG00010002615)	CHFR (ENSVURG00010002669)	FBRSL1 (ENSVURG00010002730)	GALNT9 (ENSVURG00010002793)	NOC4L (ENSVURG00010002929)	DDX51 (ENSVURG00010002953)	ENSVURG00010003024	ENSVURG00010003255
koala	MODERN SPECIES	400		ENSPCIG00000036280 #9	ENSPCIG00000030963	ENSPCIG00000019786 #13	PCP2 (ENSPCIG00000019785) #11	ENSPCIG00000019784	XAB2 (ENSPCIG00000019783) #14	CAMSAP3 (ENSPCIG00000019782) #15	PNPLA6 (ENSPCIG00000019780) #16	MCOLN1 (ENSPCIG00000019497) #17	ENSPCIG00000019494 #18	ENSPCIG00000019492 #19	PEX11G (ENSPCIG00000019491) #20	ENSPCIG00000035024	ENSPCIG00000019488	INSR (ENSPCIG00000022748) #22	ENSPCIG00000032269
Wallaby	MODERN SPECIES	7971																INSR (ENSMEUG00000001415) #22
Tasmanian devil	MODERN SPECIES		ENSSHAG00000005535	ENSSHAG00000006704	ENSSHAG00000007549 #7	TRAPPC5 (ENSSHAG00000027199) #8	ENSSHAG00000021671	STXBP2 (ENSSHAG00000000084) #13	ENSSHAG00000000223 #11	PET100 (ENSSHAG00000032179) #12	XAB2 (ENSSHAG00000000948) #14	ENSSHAG00000023339 #15	PNPLA6 (ENSSHAG00000000066) #16	MCOLN1 (ENSSHAG00000002910) #17	PEX11G (ENSSHAG00000004359) #20	ENSSHAG00000003898 #19	ENSSHAG00000005495	ENSSHAG00000007439 #22	ENSSHAG00000008682 #21	ENSSHAG00000008970	ENSSHAG00000009304	ENSSHAG00000009546	POLE (ENSSHAG00000009616)	PXMP2 (ENSSHAG00000020767)	PGAM5 (ENSSHAG00000010277)	ANKLE2 (ENSSHAG00000010335)	ENSSHAG00000001239	ENSSHAG00000031198	GALNT9 (ENSSHAG00000009433)	NOC4L (ENSSHAG00000011598)	DDX51 (ENSSHAG00000011696)	ENSSHAG00000012001	EP400 (ENSSHAG00000012476)
Opossum	MODERN SPECIES	2	ENSMODG00000027477	ENSMODG00000014982	ENSMODG00000014985 #7	TRAPPC5 (ENSMODG00000023879) #8	RETN (ENSMODG00000049491)	STXBP2 (ENSMODG00000015002) #13	PCP2 (ENSMODG00000036651) #11	ENSMODG00000042417	XAB2 (ENSMODG00000015022) #14	CAMSAP3 (ENSMODG00000015034) #15	PNPLA6 (ENSMODG00000015066) #16	MCOLN1 (ENSMODG00000015084) #17	ENSMODG00000015111 #19	PEX11G (ENSMODG00000015117) #20	ENSMODG00000015127	INSR (ENSMODG00000015101) #22	ARHGEF18 (ENSMODG00000015139) #21	ENSMODG00000023874	ENSMODG00000040944	ENSMODG00000040730	P2RX2 (ENSMODG00000015154)	POLE (ENSMODG00000015171)	PXMP2 (ENSMODG00000015176)	PGAM5 (ENSMODG00000015179)	ANKLE2 (ENSMODG00000015199)	ENSMODG00000048294	ENSMODG00000023870	ENSMODG00000023648	ENSMODG00000043816	ENSMODG00000046866	ENSMODG00000027552
Platypus	MODERN SPECIES	84	ENSOANG00000049384	ENSOANG00000007244	CHERP (ENSOANG00000045953)	SLC35E1 (ENSOANG00000042325)	ENSOANG00000013449	SMIM7 (ENSOANG00000047213)	TMEM38A (ENSOANG00000007866)	ENSOANG00000007867	NWD1 (ENSOANG00000007868)	SIN3B (ENSOANG00000013064)	ENSOANG00000013065	CPAMD8 (ENSOANG00000013066)	ENSOANG00000019897	MYO9B (ENSOANG00000008686)	USE1 (ENSOANG00000049806)	INSR (ENSOANG00000002002) #22	ENSOANG00000047277	ARHGEF18 (ENSOANG00000009603) #21	ENSOANG00000005191	PEX11G (ENSOANG00000013450) #20	ENSOANG00000004760 #19	ARRDC2 (ENSOANG00000013069)	ENSOANG00000001288	MAST3 (ENSOANG00000001293)	PIK3R2 (ENSOANG00000001300)	ENSOANG00000001305	MPV17L2 (ENSOANG00000043847)	RAB3A (ENSOANG00000008654)	ENSOANG00000049171	ENSOANG00000039923	LSM4 (ENSOANG00000007434)
Sauria	ANCESTRAL SPECIES	20	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285	ENSGT00940000162806
Archosauria	ANCESTRAL SPECIES	16	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285	ENSGT00940000162806
Aves	ANCESTRAL SPECIES	20	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285	ENSGT00940000162806
African ostrich	MODERN SPECIES	180	EPS15L1 (ENSSCUG00000001905)	CALR3 (ENSSCUG00000001962)	ENSSCUG00000001965	CHERP (ENSSCUG00000001967)	SLC35E1 (ENSSCUG00000001971)	MED26 (ENSSCUG00000001974)	SMIM7 (ENSSCUG00000001978)	TMEM38A (ENSSCUG00000001980)	NWD1 (ENSSCUG00000001988)	SIN3B (ENSSCUG00000002001)	F2RL3 (ENSSCUG00000002004)	ENSSCUG00000002005	HAUS8 (ENSSCUG00000002008)	MYO9B (ENSSCUG00000002014)	USE1 (ENSSCUG00000002029)	INSR (ENSSCUG00000002032) #22	ARHGEF18 (ENSSCUG00000002036) #21	ENSSCUG00000002046	ENSSCUG00000002047 #20	ARRDC2 (ENSSCUG00000002052)
Neognathae	ANCESTRAL SPECIES	21	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285	ENSGT00940000162806
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162285	ENSGT00940000162806	ENSGT00610000086173
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a	ENSGT00940000161872	ENSGT00950000185433
Golden eagle	MODERN SPECIES	3	EPS15L1 (ENSACCG00020011983)	CALR3 (ENSACCG00020011798)	C19orf44 (ENSACCG00020011769)	CHERP (ENSACCG00020011736)	SLC35E1 (ENSACCG00020011685)	MED26 (ENSACCG00020011662)	SMIM7 (ENSACCG00020011633)	TMEM38A (ENSACCG00020011612)	ENSACCG00020011593	SIN3B (ENSACCG00020011471)	F2RL3 (ENSACCG00020011442)	CPAMD8 (ENSACCG00020007102)	HAUS8 (ENSACCG00020007063)	MYO9B (ENSACCG00020006996)	USE1 (ENSACCG00020006959)	INSR (ENSACCG00020006932) #22	ENSACCG00020006918	ARHGEF18 (ENSACCG00020006875) #21	ENSACCG00020006793	ARRDC2 (ENSACCG00020006771)	MAST3 (ENSACCG00020006703)	PIK3R2 (ENSACCG00020006658)	IFI30 (ENSACCG00020006634)	MPV17L2 (ENSACCG00020006616)	RAB3A (ENSACCG00020006602)	ENSACCG00020006565	JUND (ENSACCG00020006540)	LSM4 (ENSACCG00020006528)	PGPEP1 (ENSACCG00020006516)	ENSACCG00020006502	SSBP4 (ENSACCG00020006329)
Kakapo	MODERN SPECIES	13	ENSSHBG00005006798	GNA11 (ENSSHBG00005006722)	ENSSHBG00005006703	ENSSHBG00005006473	S1PR4 (ENSSHBG00005006301)	NCLN (ENSSHBG00005006281)	ENSSHBG00005006249	CELF5 (ENSSHBG00005006219)	HSD11B1L (ENSSHBG00005006185)	MICOS13 (ENSSHBG00005006161)	ENSSHBG00005006054	ENSSHBG00005005932	ENSSHBG00005005870	MAP1S (ENSSHBG00005005798)	FCHO1 (ENSSHBG00005000933)	INSR (ENSSHBG00005000915) #22	ARHGEF18 (ENSSHBG00005000899) #21	ENSSHBG00005019127	ARRDC2 (ENSSHBG00005019120)	MAST3 (ENSSHBG00005017671)	PIK3R2 (ENSSHBG00005017536)	IFI30 (ENSSHBG00005017530)	MPV17L2 (ENSSHBG00005017526)	RAB3A (ENSSHBG00005017522)	ENSSHBG00005017510	JUND (ENSSHBG00005017505)	LSM4 (ENSSHBG00005017503)	PGPEP1 (ENSSHBG00005017497)	ENSSHBG00005017494	ENSSHBG00005017492	SSBP4 (ENSSHBG00005017488)
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b
Great tit	MODERN SPECIES	21	CELF5 (ENSPMJG00000010888)	ENSPMJG00000010887	MICOS13 (ENSPMJG00000010875)	ENSPMJG00000010874	ENSPMJG00000010873	SLC35E1 (ENSPMJG00000010872)	MED26 (ENSPMJG00000010871)	SMIM7 (ENSPMJG00000010869)	TMEM38A (ENSPMJG00000010867)	SIN3B (ENSPMJG00000010861)	F2RL3 (ENSPMJG00000010859)	CPAMD8 (ENSPMJG00000010852)	HAUS8 (ENSPMJG00000010850)	MYO9B (ENSPMJG00000010846)	USE1 (ENSPMJG00000010845)	INSR (ENSPMJG00000010844) #22	ENSPMJG00000010842	ARHGEF18 (ENSPMJG00000010837) #21	ENSPMJG00000010836	PEX11G (ENSPMJG00000010835) #20	ARRDC2 (ENSPMJG00000010834)	ENSPMJG00000010833	MAST3 (ENSPMJG00000010830)	PIK3R2 (ENSPMJG00000010829)	IFI30 (ENSPMJG00000010828)	RFX2 (ENSPMJG00000010657)	ACSBG2 (ENSPMJG00000010652)	MLLT1 (ENSPMJG00000010651)	ACER1 (ENSPMJG00000010649)	ENSPMJG00000010647	MYO1F (ENSPMJG00000010643)
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000154146.b.b.b	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b
Flycatcher	MODERN SPECIES	20	CELF5 (ENSFALG00000013886)	ENSFALG00000013885	ENSFALG00000027254	ENSFALG00000013882	ENSFALG00000013881	SLC35E1 (ENSFALG00000023928)	MED26 (ENSFALG00000013876)	ENSFALG00000028164	TMEM38A (ENSFALG00000013872)	SIN3B (ENSFALG00000013869)	F2RL3 (ENSFALG00000013868)	CPAMD8 (ENSFALG00000013860)	HAUS8 (ENSFALG00000013857)	MYO9B (ENSFALG00000013855)	USE1 (ENSFALG00000026213)	ENSFALG00000013853 #22	ENSFALG00000026675	ENSFALG00000013852 #21	ENSFALG00000013850	ENSFALG00000023440 #20	ARRDC2 (ENSFALG00000013849)	MAST3 (ENSFALG00000013842)	PIK3R2 (ENSFALG00000013839)	IFI30 (ENSFALG00000013837)	ENSFALG00000013834	ENSFALG00000026674	RFX2 (ENSFALG00000013832)	ACSBG2 (ENSFALG00000013826)	MLLT1 (ENSFALG00000013823)	ACER1 (ENSFALG00000024447)	ZNF414 (ENSFALG00000028613)
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b	ENSGT00390000006876
Medium ground finch	MODERN SPECIES	251													HAUS8 (ENSGFOG00000014434)	MYO9B (ENSGFOG00000014411)	USE1 (ENSGFOG00000014409)	INSR (ENSGFOG00000014399) #22	ARHGEF18 (ENSGFOG00000014387) #21	ARRDC2 (ENSGFOG00000014384)	MAST3 (ENSGFOG00000014346)	PIK3R2 (ENSGFOG00000014336)	IFI30 (ENSGFOG00000014333)	RFX2 (ENSGFOG00000014241)	ACSBG2 (ENSGFOG00000014217)	MLLT1 (ENSGFOG00000014213)	ACER1 (ENSGFOG00000014212)	ENSGFOG00000014210	ENSGFOG00000014208	MYO1F (ENSGFOG00000014025)	ADAMTS10 (ENSGFOG00000014001)	ZAP70 (ENSGFOG00000013999)	ENSGFOG00000013997
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00940000154201.a.a.b.d	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000166580	ENSGT01050000244879.a.a.a	ENSGT00940000155332.A	ENSGT00940000158800	ENSGT00730000110920.b.a.a	ENSGT00950000182907.b	ENSGT00390000006876
Zebra finch	MODERN SPECIES	21	ENSTGUG00000000514	HSD11B1L (ENSTGUG00000000510)	MICOS13 (ENSTGUG00000000509)	ENSTGUG00000000502	ENSTGUG00000000489	SLC35E1 (ENSTGUG00000021589)	MED26 (ENSTGUG00000025288)	ENSTGUG00000000482	TMEM38A (ENSTGUG00000000480)	SIN3B (ENSTGUG00000000474)	F2RL3 (ENSTGUG00000000473)	CPAMD8 (ENSTGUG00000000470)	HAUS8 (ENSTGUG00000000469)	MYO9B (ENSTGUG00000000453)	USE1 (ENSTGUG00000000443)	INSR (ENSTGUG00000000426) #22	ARHGEF18 (ENSTGUG00000000416) #21	ENSTGUG00000000415	PEX11G (ENSTGUG00000026140) #20	ARRDC2 (ENSTGUG00000000411)	ENSTGUG00000026934	MAST3 (ENSTGUG00000000403)	PIK3R2 (ENSTGUG00000000392)	IFI30 (ENSTGUG00000000388)	RFX2 (ENSTGUG00000000369)	ACSBG2 (ENSTGUG00000000363)	MLLT1 (ENSTGUG00000000360)	ACER1 (ENSTGUG00000025023)	ENSTGUG00000000352	ZNF414 (ENSTGUG00000000351)	MYO1F (ENSTGUG00000000346)
Common canary	MODERN SPECIES	44	ENSSCAG00000005350	ENSSCAG00000005346	ENSSCAG00000004187	ENSSCAG00000003995	ENSSCAG00000003979	SLC35E1 (ENSSCAG00000003963)	MED26 (ENSSCAG00000003956)	SMIM7 (ENSSCAG00000003955)	TMEM38A (ENSSCAG00000003949)	SIN3B (ENSSCAG00000003943)	F2RL3 (ENSSCAG00000003938)	CPAMD8 (ENSSCAG00000003920)	HAUS8 (ENSSCAG00000003910)	MYO9B (ENSSCAG00000003623)	USE1 (ENSSCAG00000003564)	INSR (ENSSCAG00000003553) #22	ENSSCAG00000003545	ARHGEF18 (ENSSCAG00000003534) #21	ENSSCAG00000003532	PEX11G (ENSSCAG00000003522) #20	ARRDC2 (ENSSCAG00000003515)	MAST3 (ENSSCAG00000002920)	PIK3R2 (ENSSCAG00000002784)	IFI30 (ENSSCAG00000002724)	ENSSCAG00000002698	RFX2 (ENSSCAG00000002695)	ACSBG2 (ENSSCAG00000002681)	MLLT1 (ENSSCAG00000002671)	ACER1 (ENSSCAG00000002667)	ENSSCAG00000002662	ZNF414 (ENSSCAG00000002652)
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00390000014361.d	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b.f	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00390000014361.d	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b.f	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a	ENSGT00940000161872
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00940000164495.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b.f	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a	ENSGT00940000161872	ENSGT00950000183049.C
Turkey	MODERN SPECIES	23	AP1M1 (ENSMGAG00000005717)	ENSMGAG00000005712	EPS15L1 (ENSMGAG00000005657)	CALR3 (ENSMGAG00000005629)	ENSMGAG00000005624	CHERP (ENSMGAG00000005571)	SLC35E1 (ENSMGAG00000005552)	MED26 (ENSMGAG00000005545)	TMEM38A (ENSMGAG00000005518)	SIN3B (ENSMGAG00000005467)	F2RL3 (ENSMGAG00000015746)	CPAMD8 (ENSMGAG00000005382)	ENSMGAG00000005368	MYO9B (ENSMGAG00000005297)	USE1 (ENSMGAG00000005285)	ENSMGAG00000005184 #22	ENSMGAG00000005142 #21	ENSMGAG00000005115	ARRDC2 (ENSMGAG00000004224)	MAST3 (ENSMGAG00000004850)	PIK3R2 (ENSMGAG00000005021)	IFI30 (ENSMGAG00000005001)	ENSMGAG00000018897	ENSMGAG00000018526	ENSMGAG00000020125	ENSMGAG00000021438	LSM4 (ENSMGAG00000020592)	PGPEP1 (ENSMGAG00000005130)	ENSMGAG00000022829	ENSMGAG00000018105	ELL (ENSMGAG00000005093)
Chicken	MODERN SPECIES	20	KLF2 (ENSGALG00010027941)	ENSGALG00010027936	CALR3 (ENSGALG00010027111)	C19orf44 (ENSGALG00010027109)	CHERP (ENSGALG00010027105)	SLC35E1 (ENSGALG00010028399)	MED26 (ENSGALG00010028391)	SMIM7 (ENSGALG00010027360)	TMEM38A (ENSGALG00010027351)	SIN3B (ENSGALG00010027346)	F2RL3 (ENSGALG00010027279)	CPAMD8 (ENSGALG00010027275)	HAUS8 (ENSGALG00010027273)	MYO9B (ENSGALG00010027267)	USE1 (ENSGALG00010027262)	INSR (ENSGALG00010027254) #22	ARHGEF18 (ENSGALG00010027244) #21	PEX11G (ENSGALG00010027236)	ARRDC2 (ENSGALG00010027232)	ENSGALG00010027340	MAST3 (ENSGALG00010027335)	PIK3R2 (ENSGALG00010027324)	ENSGALG00010027321	MPV17L2 (ENSGALG00010027317)	RAB3A (ENSGALG00010027315)	ENSGALG00010027314	JUND (ENSGALG00010027307)	LSM4 (ENSGALG00010027305)	PGPEP1 (ENSGALG00010027299)	ENSGALG00010027172	SSBP4 (ENSGALG00010027168)
Japanese quail	MODERN SPECIES	20	ENSCJPG00005015176	EPS15L1 (ENSCJPG00005013902)	CALR3 (ENSCJPG00005013885)	C19orf44 (ENSCJPG00005013884)	CHERP (ENSCJPG00005013883)	SLC35E1 (ENSCJPG00005013880)	MED26 (ENSCJPG00005013873)	SMIM7 (ENSCJPG00005013871)	TMEM38A (ENSCJPG00005013869)	SIN3B (ENSCJPG00005013686)	F2RL3 (ENSCJPG00005013685)	ENSCJPG00005013684	MYO9B (ENSCJPG00005013273)	ENSCJPG00005013269	ENSCJPG00005013268	INSR (ENSCJPG00005011939) #22	ARHGEF18 (ENSCJPG00005011932) #21	ENSCJPG00005011931	ENSCJPG00005011930 #20	ARRDC2 (ENSCJPG00005011929)	ENSCJPG00005011928	MAST3 (ENSCJPG00005011912)	PIK3R2 (ENSCJPG00005011909)	IFI30 (ENSCJPG00005011906)	MPV17L2 (ENSCJPG00005011905)	RAB3A (ENSCJPG00005011904)	JUND (ENSCJPG00005011902)	LSM4 (ENSCJPG00005011900)	PGPEP1 (ENSCJPG00005011899)	ENSCJPG00005011898	ISYNA1 (ENSCJPG00005011896)
Anatidae	ANCESTRAL SPECIES	62	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361.c	ENSGT00390000014361.d	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620
Duck	MODERN SPECIES	20	ENSAPLG00000009602	EPS15L1 (ENSAPLG00000009655)	CALR3 (ENSAPLG00000010728)	C19orf44 (ENSAPLG00000010741)	CHERP (ENSAPLG00000010773)	SLC35E1 (ENSAPLG00000011233)	MED26 (ENSAPLG00000011240)	TMEM38A (ENSAPLG00000024207)	SIN3B (ENSAPLG00000011724)	F2RL3 (ENSAPLG00000012122)	ENSAPLG00000012206	HAUS8 (ENSAPLG00000012957)	MYO9B (ENSAPLG00000013123)	ENSAPLG00000021258	ENSAPLG00000025695	INSR (ENSAPLG00000014259) #22	ARHGEF18 (ENSAPLG00000015732) #21	ENSAPLG00000001869	PGPEP1 (ENSAPLG00000007370)	ELL (ENSAPLG00000006360)	KLHL26 (ENSAPLG00000011078)	CRTC1 (ENSAPLG00000010657)	ENSAPLG00000009709	UPF1 (ENSAPLG00000009175)	ENSAPLG00000009148	CERS1 (ENSAPLG00000008945)	COPE (ENSAPLG00000008757)	HOMER3 (ENSAPLG00000008170)	SUGP2 (ENSAPLG00000006469)	ARMC6 (ENSAPLG00000006480)	SLC25A42 (ENSAPLG00000006582)
Pink-footed goose	MODERN SPECIES	221	CALR3 (ENSABRG00000012473)	ENSABRG00000012464	CHERP (ENSABRG00000012412)	SLC35E1 (ENSABRG00000012348)	MED26 (ENSABRG00000012342)	SMIM7 (ENSABRG00000012337)	TMEM38A (ENSABRG00000012328)	NWD1 (ENSABRG00000012111)	SIN3B (ENSABRG00000012013)	F2RL3 (ENSABRG00000011995)	ENSABRG00000011963	ENSABRG00000011941	MYO9B (ENSABRG00000008759)	ENSABRG00000008482	ENSABRG00000008470	INSR (ENSABRG00000004285) #22	ARHGEF18 (ENSABRG00000003820) #21	ENSABRG00000003818	PEX11G (ENSABRG00000003816) #20	ARRDC2 (ENSABRG00000003384)	MAST3 (ENSABRG00000001985)	PIK3R2 (ENSABRG00000001767)	IFI30 (ENSABRG00000001719)	MPV17L2 (ENSABRG00000001672)	ENSABRG00000001610	ENSABRG00000001422
Australian saltwater crocodile	MODERN SPECIES	3	EPS15L1 (ENSCPRG00005017291)	CALR3 (ENSCPRG00005017190)	C19orf44 (ENSCPRG00005017188)	CHERP (ENSCPRG00005017109)	SLC35E1 (ENSCPRG00005017079)	MED26 (ENSCPRG00005017077)	ENSCPRG00005017074	TMEM38A (ENSCPRG00005017069)	ENSCPRG00005017068	NWD1 (ENSCPRG00005017060)	SIN3B (ENSCPRG00005017017)	F2RL3 (ENSCPRG00005017006)	CPAMD8 (ENSCPRG00005016974)	ENSCPRG00005016950	MYO9B (ENSCPRG00005016432)	INSR (ENSCPRG00005016365) #22	ARHGEF18 (ENSCPRG00005016360) #21	PEX11G (ENSCPRG00005016356) #20	ARRDC2 (ENSCPRG00005016350)	ENSCPRG00005016343	MAST3 (ENSCPRG00005015910)	PIK3R2 (ENSCPRG00005015821)	IFI30 (ENSCPRG00005015813)	MPV17L2 (ENSCPRG00005015809)	RAB3A (ENSCPRG00005015806)	ENSCPRG00005015804	ENSCPRG00005015785	ENSCPRG00005015779	LSM4 (ENSCPRG00005015775)	PGPEP1 (ENSCPRG00005015771)	ISYNA1 (ENSCPRG00005015768)
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000155438.b	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00390000014215 #19	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000155674	ENSGT01030000234840	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a
Abingdon island giant tortoise	MODERN SPECIES	897									NWD1 (ENSCABG00000018369)	SIN3B (ENSCABG00000018314)	F2RL3 (ENSCABG00000018311)	ENSCABG00000018307	HAUS8 (ENSCABG00000018304)	MYO9B (ENSCABG00000016450)	USE1 (ENSCABG00000016422)	INSR (ENSCABG00000016421) #22	ARHGEF18 (ENSCABG00000016420) #21	ENSCABG00000016419	PEX11G (ENSCABG00000016417) #20	TEX45 (ENSCABG00000016416) #19	ARRDC2 (ENSCABG00000016415)	MAST3 (ENSCABG00000016409)	PIK3R2 (ENSCABG00000016368)	IFI30 (ENSCABG00000016346)	MPV17L2 (ENSCABG00000016336)	RAB3A (ENSCABG00000016331)	ENSCABG00000016323	ENSCABG00000016321	LSM4 (ENSCABG00000016318)	PGPEP1 (ENSCABG00000016317)	ENSCABG00000016315
Goode s thornscrub tortoise	MODERN SPECIES	14	ENSGEVG00005014693	EPS15L1 (ENSGEVG00005015080)	CALR3 (ENSGEVG00005016752)	C19orf44 (ENSGEVG00005016875)	CHERP (ENSGEVG00005016897)	SLC35E1 (ENSGEVG00005016933)	MED26 (ENSGEVG00005016975)	SMIM7 (ENSGEVG00005016994)	TMEM38A (ENSGEVG00005017010)	NWD1 (ENSGEVG00005017068)	SIN3B (ENSGEVG00005017238)	F2RL3 (ENSGEVG00005017263)	CPAMD8 (ENSGEVG00005017342)	MYO9B (ENSGEVG00005017707)	USE1 (ENSGEVG00005018461)	INSR (ENSGEVG00005018487) #22	ARHGEF18 (ENSGEVG00005018537) #21	ENSGEVG00005018609	PEX11G (ENSGEVG00005018620) #20	ARRDC2 (ENSGEVG00005018645)	ENSGEVG00005018680	MAST3 (ENSGEVG00005018711)	PIK3R2 (ENSGEVG00005018788)	IFI30 (ENSGEVG00005018820)	MPV17L2 (ENSGEVG00005018840)	ENSGEVG00005018855	RAB3A (ENSGEVG00005018864)	ENSGEVG00005018960	JUND (ENSGEVG00005019215)	LSM4 (ENSGEVG00005019224)	PGPEP1 (ENSGEVG00005019233)
Emydidae	ANCESTRAL SPECIES	14	ENSGT00950000182915.b.b.b.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000161635	ENSGT00940000159560	ENSGT01050000244840.A.b.a	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000160620	ENSGT00940000158959.b	ENSGT00940000164492	ENSGT00940000162806	ENSGT00610000086173	ENSGT00390000015368.a.a	ENSGT00940000161872
Three-toed box turtle	MODERN SPECIES	92	EPS15L1 (ENSTMTG00000005574)	CALR3 (ENSTMTG00000010255)	ENSTMTG00000010292	CHERP (ENSTMTG00000010306)	SLC35E1 (ENSTMTG00000010322)	MED26 (ENSTMTG00000010343)	TMEM38A (ENSTMTG00000010365)	ENSTMTG00000010464	NWD1 (ENSTMTG00000010502)	SIN3B (ENSTMTG00000010646)	F2RL3 (ENSTMTG00000010698)	CPAMD8 (ENSTMTG00000010720)	HAUS8 (ENSTMTG00000010855)	MYO9B (ENSTMTG00000010895)	USE1 (ENSTMTG00000011087)	INSR (ENSTMTG00000011119) #22	ENSTMTG00000011196	ARHGEF18 (ENSTMTG00000011217) #21	ENSTMTG00000011265	PEX11G (ENSTMTG00000011272) #20	ARRDC2 (ENSTMTG00000011291)	MAST3 (ENSTMTG00000011391)	PIK3R2 (ENSTMTG00000012134)	IFI30 (ENSTMTG00000012174)	MPV17L2 (ENSTMTG00000012198)	RAB3A (ENSTMTG00000012226)	ENSTMTG00000012246	ENSTMTG00000012309	ENSTMTG00000012321	JUND (ENSTMTG00000012359)	LSM4 (ENSTMTG00000012412)
painted turtle	MODERN SPECIES	771	EPS15L1 (ENSCPBG00000015007)	CALR3 (ENSCPBG00000014982)	C19orf44 (ENSCPBG00000014974)	CHERP (ENSCPBG00000014970)	SLC35E1 (ENSCPBG00000014966)	MED26 (ENSCPBG00000014964)	SMIM7 (ENSCPBG00000014961)	TMEM38A (ENSCPBG00000014959)	NWD1 (ENSCPBG00000014938)	SIN3B (ENSCPBG00000014932)	F2RL3 (ENSCPBG00000014930)	CPAMD8 (ENSCPBG00000014917)	HAUS8 (ENSCPBG00000014909)	MYO9B (ENSCPBG00000014216)	USE1 (ENSCPBG00000014174)	INSR (ENSCPBG00000013065) #22	ARHGEF18 (ENSCPBG00000012967) #21	ENSCPBG00000012964 #20	ENSCPBG00000012961	ARRDC2 (ENSCPBG00000012959)	ENSCPBG00000012956	MAST3 (ENSCPBG00000012946)	PIK3R2 (ENSCPBG00000012939)	IFI30 (ENSCPBG00000012937)	MPV17L2 (ENSCPBG00000012933)	RAB3A (ENSCPBG00000012930)	ENSCPBG00000012929	ENSCPBG00000012928	ENSCPBG00000012926	LSM4 (ENSCPBG00000012925)	PGPEP1 (ENSCPBG00000012924)
Chinese turtle	MODERN SPECIES	1324						ACSBG2 (ENSPSIG00000002108)	RPL36 (ENSPSIG00000002110)	LONP1 (ENSPSIG00000002112)	SLC1A6 (ENSPSIG00000002120)	ENSPSIG00000002125	RANBP3 (ENSPSIG00000002126)	ENSPSIG00000002130	HAUS8 (ENSPSIG00000002131)	MYO9B (ENSPSIG00000002133)	USE1 (ENSPSIG00000002137)	INSR (ENSPSIG00000002138) #22	ARHGEF18 (ENSPSIG00000002147) #21	ENSPSIG00000001050	PEX11G (ENSPSIG00000002148) #20	TEX45 (ENSPSIG00000002150) #19	ARRDC2 (ENSPSIG00000002151)	IL12RB1 (ENSPSIG00000002154)	MAST3 (ENSPSIG00000002155)	PIK3R2 (ENSPSIG00000002156)	IFI30 (ENSPSIG00000002157)	MPV17L2 (ENSPSIG00000002158)	RAB3A (ENSPSIG00000002159)	ENSPSIG00000002160	ENSPSIG00000002161
Lepidosauria	ANCESTRAL SPECIES	35	ENSGT00940000155914	ENSGT00390000018395	ENSGT00950000183049.C	ENSGT00390000004001	ENSGT00950000185433	ENSGT00940000161872	ENSGT00390000015368.a.a	ENSGT00610000086173	ENSGT00940000162806	ENSGT00940000164492	ENSGT00940000158959.b	ENSGT00940000160620.db	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00940000165051	ENSGT00390000018845.f	ENSGT00390000014626
Episquamata	ANCESTRAL SPECIES	26	ENSGT00610000086173	ENSGT00940000162806	ENSGT00940000164492	ENSGT00940000158959.b	ENSGT00940000160620.db	ENSGT00940000156845	ENSGT00390000006876	ENSGT00940000158588	ENSGT00940000162442	ENSGT00390000007212	ENSGT00390000012434	ENSGT00940000159972	ENSGT00530000063553.b.a	ENSGT00390000011943.b	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00940000165051	ENSGT00390000018845.f	ENSGT00390000014626
Laterata	ANCESTRAL SPECIES	47	ENSGT00940000162806	ENSGT00940000164492	ENSGT00940000158959.b	ENSGT00940000160620.db	ENSGT00940000156845	ENSGT00390000006876	ENSGT00940000158588	ENSGT00940000162442	ENSGT00390000007212	ENSGT00390000012434	ENSGT00940000159972	ENSGT00530000063553.b.a	ENSGT00390000011943.a.a	ENSGT00390000011943.b	ENSGT00390000014361.a	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00390000012431	ENSGT00940000157166	ENSGT00940000174538	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00940000165051	ENSGT00390000018845.f	ENSGT00390000014626
Argentine black and white tegu	MODERN SPECIES	174						MYO9B (ENSSMRG00000005517)	ZNF414 (ENSSMRG00000005568)	RANBP3 (ENSSMRG00000005571)	CAPS (ENSSMRG00000005574)	VMAC (ENSSMRG00000005575)	NDUFA11 (ENSSMRG00000005577)	SLC1A6 (ENSSMRG00000005591)	LONP1 (ENSSMRG00000005592)	RPL36 (ENSSMRG00000005597)	USE1 (ENSSMRG00000005600)	INSR (ENSSMRG00000005612) #22	ENSSMRG00000005628	ARHGEF18 (ENSSMRG00000005643) #21	PEX11G (ENSSMRG00000005646) #20	ARRDC2 (ENSSMRG00000005647)	ENSSMRG00000005652	MAST3 (ENSSMRG00000005660)	PIK3R2 (ENSSMRG00000006071)	IFI30 (ENSSMRG00000006090)	CPAMD8 (ENSSMRG00000006096)	F2RL3 (ENSSMRG00000006109)	SIN3B (ENSSMRG00000006110)	NWD1 (ENSSMRG00000006115)	ENSSMRG00000006120	TMEM38A (ENSSMRG00000006123)	SMIM7 (ENSSMRG00000006124)
Common wall lizard	MODERN SPECIES	9	ENSPMRG00000022804	RAB3A (ENSPMRG00000022750)	ENSPMRG00000022743	MYO9B (ENSPMRG00000022247)	ZNF414 (ENSPMRG00000022048)	ENSPMRG00000022032	RANBP3 (ENSPMRG00000022016)	CAPS (ENSPMRG00000022005)	VMAC (ENSPMRG00000022002)	NDUFA11 (ENSPMRG00000021986)	SLC1A6 (ENSPMRG00000021969)	LONP1 (ENSPMRG00000021946)	RPL36 (ENSPMRG00000021932)	ENSPMRG00000021923	ENSPMRG00000021912	INSR (ENSPMRG00000021675) #22	ARHGEF18 (ENSPMRG00000021611) #21	PEX11G (ENSPMRG00000021591) #20	ARRDC2 (ENSPMRG00000021585)	MAST3 (ENSPMRG00000021572)	ENSPMRG00000021568	PIK3R2 (ENSPMRG00000021395)	ENSPMRG00000021360	CPAMD8 (ENSPMRG00000021337)	F2RL3 (ENSPMRG00000021328)	SIN3B (ENSPMRG00000021102)	ENSPMRG00000021046	ENSPMRG00000021020	ELAVL1 (ENSPMRG00000021014)	AP1M1 (ENSPMRG00000021002)	RAB8A (ENSPMRG00000023613)
Toxicofera	ANCESTRAL SPECIES	53											ENSGT00390000012434	ENSGT00940000159972	ENSGT00530000063553.b.a	ENSGT00390000011943.b	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00730000111147
Elapidae	DUPLICATION
Elapidae	ANCESTRAL SPECIES	3	ENSGT00610000086173	ENSGT00940000162806	ENSGT00940000164492	ENSGT00940000158959.b	ENSGT00940000160620.db	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000006876	ENSGT00940000158588	ENSGT00390000007212	ENSGT00390000012434	ENSGT00940000159972	ENSGT00530000063553.b.a	ENSGT00390000011943.b	ENSGT00390000014361	ENSGT00940000155404.c #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00730000111147
Elapidae_a	ANCESTRAL SPECIES	10	ENSGT00390000015368.a.a	ENSGT00610000086173	ENSGT00940000162806	ENSGT00940000158959.b	ENSGT00940000160620.db	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000006876	ENSGT00940000158588	ENSGT00390000007212	ENSGT00390000012434	ENSGT00940000159972	ENSGT00530000063553.b.a	ENSGT00390000011943.b	ENSGT00390000014361	ENSGT00940000155404.c #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00940000164804	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007
Acanthophiinae	ANCESTRAL SPECIES	13	ENSGT00940000161872	ENSGT00390000015368.a.a	ENSGT00610000086173	ENSGT00940000162806	ENSGT00940000158959.b	ENSGT00940000160620.db	ENSGT00940000156845	ENSGT00390000006876	ENSGT00940000158588	ENSGT00390000007212	ENSGT00390000012434	ENSGT00940000159972	ENSGT00530000063553.b.a	ENSGT00390000011943.b	ENSGT00390000014361	ENSGT00940000155404.c #22	ENSGT00940000157375 #21	ENSGT00390000000427 #20	ENSGT00940000159994	ENSGT00940000157166	ENSGT00940000157050	ENSGT00940000164804	ENSGT00390000010450	ENSGT00940000162399	ENSGT01050000244840.A.b.a	ENSGT00940000159560	ENSGT00940000161635	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007
Eastern brown snake	MODERN SPECIES	10	LSM4 (ENSPTXG00000002136)	JUND (ENSPTXG00000002133)	ENSPTXG00000002128	RAB3A (ENSPTXG00000002125)	MPV17L2 (ENSPTXG00000002123)	MYO9B (ENSPTXG00000002118)	ENSPTXG00000002113	RANBP3 (ENSPTXG00000002109)	ENSPTXG00000002105	VMAC (ENSPTXG00000002102)	NDUFA11 (ENSPTXG00000002099)	SLC1A6 (ENSPTXG00000002096)	LONP1 (ENSPTXG00000002083)	RPL36 (ENSPTXG00000002080)	USE1 (ENSPTXG00000002078)	INSR (ENSPTXG00000002076) #22	ARHGEF18 (ENSPTXG00000002072) #21	PEX11G (ENSPTXG00000002070) #20	ENSPTXG00000002069	ARRDC2 (ENSPTXG00000002066)	PIK3R2 (ENSPTXG00000002028)	ENSPTXG00000002023	CPAMD8 (ENSPTXG00000002017)	F2RL3 (ENSPTXG00000002015)	SIN3B (ENSPTXG00000002012)	NWD1 (ENSPTXG00000002008)	TMEM38A (ENSPTXG00000002007)	SMIM7 (ENSPTXG00000002005)	MED26 (ENSPTXG00000002002)	SLC35E1 (ENSPTXG00000002000)	CHERP (ENSPTXG00000001995)
Mainland tiger snake	MODERN SPECIES	35	PGPEP1 (ENSNSUG00000016853)	JUND (ENSNSUG00000016852)	ENSNSUG00000016851	RAB3A (ENSNSUG00000016850)	MPV17L2 (ENSNSUG00000016849)	ENSNSUG00000016848	ENSNSUG00000016847	RANBP3 (ENSNSUG00000016832)	ENSNSUG00000016831	ENSNSUG00000016830	NDUFA11 (ENSNSUG00000016829)	ENSNSUG00000016475	LONP1 (ENSNSUG00000016322)	ENSNSUG00000016321	USE1 (ENSNSUG00000016320)	INSR (ENSNSUG00000016317) #22	ARHGEF18 (ENSNSUG00000016310) #21	PEX11G (ENSNSUG00000016308) #20	ARRDC2 (ENSNSUG00000016264)	MAST3 (ENSNSUG00000016262)	ENSNSUG00000016105	IFI30 (ENSNSUG00000016104)	ENSNSUG00000016103	F2RL3 (ENSNSUG00000016102)	SIN3B (ENSNSUG00000016100)	NWD1 (ENSNSUG00000016098)	TMEM38A (ENSNSUG00000016095)	SMIM7 (ENSNSUG00000016093)	MED26 (ENSNSUG00000016091)	SLC35E1 (ENSNSUG00000016089)	CHERP (ENSNSUG00000016084)
Blue-lipped sea krait	MODERN SPECIES	2937										ENSLLTG00000017303	SLC1A6 (ENSLLTG00000017306)	LONP1 (ENSLLTG00000017310)	ENSLLTG00000017315	RPL36 (ENSLLTG00000017320)	USE1 (ENSLLTG00000017324)	ENSLLTG00000017328 #22
Indian cobra	MODERN SPECIES		ENSNNAG00000008349	ENSNNAG00000008306	RAB3A (ENSNNAG00000008279)	MPV17L2 (ENSNNAG00000008251)	HAUS8 (ENSNNAG00000008202)	MYO9B (ENSNNAG00000007558)	ENSNNAG00000007478	RANBP3 (ENSNNAG00000007438)	ENSNNAG00000007423	ENSNNAG00000007413	NDUFA11 (ENSNNAG00000007399)	SLC1A6 (ENSNNAG00000007361)	LONP1 (ENSNNAG00000007326)	RPL36 (ENSNNAG00000007310)	USE1 (ENSNNAG00000007291)	INSR (ENSNNAG00000007213) #22	ARHGEF18 (ENSNNAG00000007143) #21	PEX11G (ENSNNAG00000007119) #20	ARRDC2 (ENSNNAG00000007086)	ENSNNAG00000007061	MAST3 (ENSNNAG00000007037)	PIK3R2 (ENSNNAG00000006970)	IFI30 (ENSNNAG00000006921)	CPAMD8 (ENSNNAG00000006789)	F2RL3 (ENSNNAG00000006751)	SIN3B (ENSNNAG00000006265)	NWD1 (ENSNNAG00000006059)	TMEM38A (ENSNNAG00000006014)	SMIM7 (ENSNNAG00000005990)	MED26 (ENSNNAG00000005983)	SLC35E1 (ENSNNAG00000005958)
Elapidae	ANCESTRAL SPECIES																	ENSGT00940000155404.d #22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT00940000155404.d #22
Blue-lipped sea krait	MODERN SPECIES	9409																ENSLLTG00000013336 #22
tuatara	MODERN SPECIES	1565	UBA52 (ENSSPUG00000010306)	KXD1 (ENSSPUG00000010296)	FKBP8 (ENSSPUG00000010283)	ELL (ENSSPUG00000010266)	ISYNA1 (ENSSPUG00000010254)	SSBP4 (ENSSPUG00000010206)	ENSSPUG00000010198	PGPEP1 (ENSSPUG00000010192)	LSM4 (ENSSPUG00000010166)	ENSSPUG00000010116	ENSSPUG00000010099	MPV17L2 (ENSSPUG00000010086)	HAUS8 (ENSSPUG00000010057)	MYO9B (ENSSPUG00000009847)	USE1 (ENSSPUG00000009768)	INSR (ENSSPUG00000009734) #22	ENSSPUG00000009720	PEX11G (ENSSPUG00000009674) #20	ARRDC2 (ENSSPUG00000009652)	MAST3 (ENSSPUG00000009422)	PIK3R2 (ENSSPUG00000009265)	IFI30 (ENSSPUG00000009238)	ENSSPUG00000009193	F2RL3 (ENSSPUG00000009184)	SIN3B (ENSSPUG00000009147)	NWD1 (ENSSPUG00000008997)	TMEM38A (ENSSPUG00000008953)	SMIM7 (ENSSPUG00000008944)	CHERP (ENSSPUG00000008901)	ENSSPUG00000008889	CALR3 (ENSSPUG00000008775)
Anura	ANCESTRAL SPECIES	125	ENSGT00940000155438.b	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626	ENSGT00390000018845.f	ENSGT00940000165051	ENSGT00940000168675	ENSGT00940000159560	ENSGT01050000244840.A.b.a.s	ENSGT00940000162399	ENSGT00390000010974	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00390000016934	ENSGT00530000063974.a	ENSGT00940000160748	ENSGT00940000165052	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00940000154396.a	ENSGT00940000159134.w.a	ENSGT00940000160489	ENSGT00940000159134.w.b	ENSGT00940000160221	ENSGT00390000018319.a.b.b.b
Frog	MODERN SPECIES		klf2 (ENSXETG00000002075)	eps15l1 (ENSXETG00000002074)	c19orf44 (ENSXETG00000002073)	cherp (ENSXETG00000002072)	med26 (ENSXETG00000021451)	smim7 (ENSXETG00000025580)	tmem38a (ENSXETG00000021455)	ENSXETG00000021456	myo9b (ENSXETG00000031954)	haus8 (ENSXETG00000033040)	cpamd8 (ENSXETG00000032091)	f2rl3 (ENSXETG00000013500)	sin3b (ENSXETG00000013501)	nwd1 (ENSXETG00000038824)	use1 (ENSXETG00000013513)	insr (ENSXETG00000013518) #22	babam1 (ENSXETG00000025571)	ENSXETG00000046959	nr2f6 (ENSXETG00000013531)	ocel1.2 (ENSXETG00000013536)	ocel1 (ENSXETG00000013539)	kcnn1 (ENSXETG00000013542)	ccdc124 (ENSXETG00000013543)	slc5a5 (ENSXETG00000013546)	jak3 (ENSXETG00000016438)	rflcii (ENSXETG00000038097)	ENSXETG00000042436	b3gnt3.2 (ENSXETG00000016436)	fcho1 (ENSXETG00000016431)	b3gnt3.1 (ENSXETG00000040687)	MAP1S (ENSXETG00000036392)
Leishan spiny toad	MODERN SPECIES		CHERP (ENSLLEG00000023991)	SLC35E1 (ENSLLEG00000023915)	ENSLLEG00000023882	MED26 (ENSLLEG00000023767)	SMIM7 (ENSLLEG00000023704)	TMEM38A (ENSLLEG00000023569)	ENSLLEG00000023496	ENSLLEG00000023468	ENSLLEG00000023303	SIN3B (ENSLLEG00000023120)	F2RL3 (ENSLLEG00000023092)	CPAMD8 (ENSLLEG00000022385)	HAUS8 (ENSLLEG00000022179)	MYO9B (ENSLLEG00000020991)	USE1 (ENSLLEG00000020365)	INSR (ENSLLEG00000020146) #22	BABAM1 (ENSLLEG00000020048)	ENSLLEG00000019608	NR2F6 (ENSLLEG00000019522)	ENSLLEG00000019464	ENSLLEG00000019417	ENSLLEG00000019333	ENSLLEG00000019293	KCNN1 (ENSLLEG00000019159)	CCDC124 (ENSLLEG00000019104)	ENSLLEG00000019079	ENSLLEG00000019057	ENSLLEG00000019036	SLC5A5 (ENSLLEG00000018890)	ENSLLEG00000018419	ENSLLEG00000018377
Coelacanth	DUPLICATION
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	1847													ENSLACG00000001555	pex11g (ENSLACG00000002972) #20	ENSLACG00000007855 #22	ENSLACG00000009952 #22
Coelacanth	MODERN SPECIES	1847														ENSLACG00000001555	pex11g (ENSLACG00000002972) #20	ENSLACG00000007855 #22	ENSLACG00000009952 #22
Coelacanth	MODERN SPECIES	3058																ENSLACG00000004756 #22
Actinopterygii	ANCESTRAL SPECIES	61											ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000164530	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT01030000234515.b	ENSGT00390000003478	ENSGT00390000003488.a.b.a	ENSGT00390000000777	ENSGT00940000154779.a.a	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.a.b	ENSGT00940000163917.b	ENSGT00390000018044.b.b	ENSGT00390000001201
Reedfish	MODERN SPECIES	3	ENSECRG00000017740	fbn2b (ENSECRG00000016720)	cers4a (ENSECRG00000016237)	lsm7 (ENSECRG00000016204)	sppl2 (ENSECRG00000016173)	ENSECRG00000016132	ENSECRG00000016015	timm13 (ENSECRG00000015961)	ENSECRG00000015947	enc3 (ENSECRG00000015936)	ncln (ENSECRG00000015892)	s1pr4 (ENSECRG00000015875)	mfsd14a2 (ENSECRG00000015839)	ENSECRG00000015802	use1 (ENSECRG00000015778)	insrb (ENSECRG00000015724) #22	arhgef18a (ENSECRG00000015672) #21	ENSECRG00000015646	CERS1 (ENSECRG00000015592)	cope (ENSECRG00000015548)	tnfaip8l1 (ENSECRG00000015531)	mydgf (ENSECRG00000015506)	loxl5b (ENSECRG00000015303)	NMRK2 (ENSECRG00000015218)	ATCAY (ENSECRG00000015171)	MATK (ENSECRG00000015127)	cplx4c (ENSECRG00000015086)	rx1 (ENSECRG00000015017)	malt2 (ENSECRG00000014970)	mrpl54 (ENSECRG00000014938)	PIP5K1C (ENSECRG00000014872)
Neopterygii	ANCESTRAL SPECIES	126	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000165007	ENSGT00940000154779.a.a	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000164530	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375 #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000160104	ENSGT00510000049239.a	ENSGT00550000075088.a.b	ENSGT00510000046773.a.b.c.a	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT00530000063801.a.a	ENSGT00390000013127.a	ENSGT01030000234887
Spotted gar	MODERN SPECIES	657	MATK (ENSLOCG00000003919)	ZFR2 (ENSLOCG00000003939)	ATCAY (ENSLOCG00000003955)	mibp (ENSLOCG00000003973)	loxl5b (ENSLOCG00000003994)	mydgf (ENSLOCG00000004004)	tnfaip8l1 (ENSLOCG00000004018)	cope (ENSLOCG00000004027)	CERS1 (ENSLOCG00000004047)	ncln (ENSLOCG00000004061)	s1pr4 (ENSLOCG00000017630)	ENSLOCG00000004092	mfsd14a2 (ENSLOCG00000004101)	MYO9B (ENSLOCG00000004111)	use1 (ENSLOCG00000004161)	insrb (ENSLOCG00000004179) #22	ENSLOCG00000004244 #21	enc3 (ENSLOCG00000017631)	ENSLOCG00000004259	ENSLOCG00000004281	timm13 (ENSLOCG00000004301)	TMPRSS9 (ENSLOCG00000004321)	sppl2 (ENSLOCG00000004334)	lsm7 (ENSLOCG00000004356)	ENSLOCG00000004375	cers4a (ENSLOCG00000004390)	fbn2b (ENSLOCG00000004413)	CTXN1 (ENSLOCG00000017632)	timm44 (ENSLOCG00000004442)	hnrnpm (ENSLOCG00000004456)	marchf2 (ENSLOCG00000004473)
Osteoglossocephalai	ANCESTRAL SPECIES	35	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00940000164530	ENSGT00390000014361	ENSGT00940000155404 #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000160104	ENSGT00510000046773.a.b.c.b	ENSGT00390000016774	ENSGT00530000063801.a.a	ENSGT01030000234599.a.b.d.b.b	ENSGT00940000155733.a.b	ENSGT00390000013127.a	ENSGT01030000234887	ENSGT00740000115744	ENSGT00510000046773.a.b.c.a	ENSGT00550000075088.a.b	ENSGT00510000049239.a
Osteoglossiformes	DUPLICATION
Osteoglossiformes	ANCESTRAL SPECIES	2	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.b	ENSGT00390000002505	ENSGT00940000163917.b	ENSGT00940000160775	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00940000164530.f	ENSGT00940000155404.g #22	ENSGT00940000157375.c.a #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00390000000051	ENSGT00940000163126.b.b	ENSGT00940000158995.a.a.a	ENSGT00940000159258.d	ENSGT00980000198641
P. kingsleyae	MODERN SPECIES	4	ENSPKIG00000010130	EPS15L1 (ENSPKIG00000010154)	rad23ab (ENSPKIG00000010204)	ENSPKIG00000010261	ENSPKIG00000010285	rx1 (ENSPKIG00000010303)	MATK (ENSPKIG00000010328)	ATCAY (ENSPKIG00000010369)	nmrk2 (ENSPKIG00000010393)	tnfaip8l1 (ENSPKIG00000010419)	CERS1 (ENSPKIG00000010433)	ncln (ENSPKIG00000010457)	s1pr4 (ENSPKIG00000010500)	MYO9B (ENSPKIG00000010594)	ENSPKIG00000010912	INSR (ENSPKIG00000010986) #22	ENSPKIG00000011061	ARHGEF18 (ENSPKIG00000011091) #21	enc3 (ENSPKIG00000011160)	timm13 (ENSPKIG00000011170)	ENSPKIG00000011197	sppl2 (ENSPKIG00000011242)	lsm7 (ENSPKIG00000011325)	ENSPKIG00000011358	cers4a (ENSPKIG00000011374)	fbn2b (ENSPKIG00000011440)	CTXN1 (ENSPKIG00000011592)	timm44 (ENSPKIG00000011604)	rab11bb (ENSPKIG00000011640)	marchf2 (ENSPKIG00000011668)	ENSPKIG00000011703
Asian bonytongue	MODERN SPECIES	24	EPS15L1 (ENSSFOG00015007740)	rad23ab (ENSSFOG00015030225)	ENSSFOG00015007595	ENSSFOG00015007554	rx1 (ENSSFOG00015007534)	MATK (ENSSFOG00015007486)	ATCAY (ENSSFOG00015007428)	mibp (ENSSFOG00015007387)	loxl5a (ENSSFOG00015007376)	tnfaip8l1 (ENSSFOG00015007357)	CERS1 (ENSSFOG00015007346)	ncln (ENSSFOG00015007294)	s1pr4 (ENSSFOG00015007287)	MYO9B (ENSSFOG00015007204)	ENSSFOG00015026640	INSR (ENSSFOG00015006996) #22	ARHGEF18 (ENSSFOG00015006935) #21	enc3 (ENSSFOG00015024763)	timm13 (ENSSFOG00015006900)	ENSSFOG00015006815	sppl2 (ENSSFOG00015006776)	lsm7 (ENSSFOG00015006728)	ENSSFOG00015006709	cers4a (ENSSFOG00015006652)	fbn2b (ENSSFOG00015006450)	CTXN1 (ENSSFOG00015025184)	timm44 (ENSSFOG00015006426)	ENSSFOG00015027151	marchf2 (ENSSFOG00015031063)	ENSSFOG00015027051	PIP5K1C (ENSSFOG00015006149)
Osteoglossiformes	ANCESTRAL SPECIES	21				ENSGT00390000018044.b.b.f	ENSGT00940000164495.c.b	ENSGT00940000155438.b	ENSGT00950000182915.b.b.a.b.a	ENSGT00730000111147	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000162148	ENSGT00940000158364.a	ENSGT00940000154779.a.a.c	ENSGT00390000000777	ENSGT00940000164530.e	ENSGT00390000014361	ENSGT00940000155404.h #22	ENSGT00940000157375.c.b #21	ENSGT01030000234515.a.b.b.b	ENSGT00940000154412.C.c	ENSGT00940000154595	ENSGT00940000158995.a.a.b	ENSGT00940000159258.c	ENSGT00940000161913	ENSGT00390000013841	ENSGT00950000183110.b.a.f	ENSGT00940000160036	ENSGT00940000159946.i	ENSGT00390000012913.a.b	ENSGT00940000160926	ENSGT00940000158649.a.a	ENSGT00390000017748
Asian bonytongue	MODERN SPECIES	17	ENSSFOG00015032715	ENSSFOG00015031414	ENSSFOG00015007997	cherp (ENSSFOG00015008022)	ENSSFOG00015008092	cplx4c (ENSSFOG00015030852)	ZFR2 (ENSSFOG00015008157)	ATCAY (ENSSFOG00015008182)	loxl5b (ENSSFOG00015008206)	mydgf (ENSSFOG00015008264)	cope (ENSSFOG00015008318)	CERS1 (ENSSFOG00015008357)	ENSSFOG00015028704	mfsd14a2 (ENSSFOG00015007072)	use1 (ENSSFOG00015025821)	INSR (ENSSFOG00015008555) #22	ARHGEF18 (ENSSFOG00015008667) #21	ENSSFOG00015008767	CTXN1 (ENSSFOG00015032822)	hnrnpm (ENSSFOG00015008815)	MARCHF2 (ENSSFOG00015009018)	rab11bb (ENSSFOG00015006245)	PIP5K1C (ENSSFOG00015009080)	ENSSFOG00015032093	ENSSFOG00015009196	ARHGAP45 (ENSSFOG00015009214)	tm6sf2a (ENSSFOG00015009281)	ENSSFOG00015026145	borcs8 (ENSSFOG00015009345)	tmem161a (ENSSFOG00015009392)	slc25a42 (ENSSFOG00015009477)
P. kingsleyae	MODERN SPECIES	17	ENSPKIG00000000340	ENSPKIG00000000357	ENSPKIG00000000371	cherp (ENSPKIG00000000423)	ENSPKIG00000000493	cplx4c (ENSPKIG00000000506)	ZFR2 (ENSPKIG00000000524)	ATCAY (ENSPKIG00000000549)	loxl5b (ENSPKIG00000000573)	cope (ENSPKIG00000000623)	mydgf (ENSPKIG00000000657)	CERS1 (ENSPKIG00000000675)	ENSPKIG00000000729	mfsd14a2 (ENSPKIG00000000844)	use1 (ENSPKIG00000000876)	ENSPKIG00000000920 #22	ARHGEF18 (ENSPKIG00000001069) #21	ENSPKIG00000001257	CTXN1 (ENSPKIG00000001312)	hnrnpm (ENSPKIG00000001332)	marchf2 (ENSPKIG00000001364)	ENSPKIG00000001389	ENSPKIG00000001410	ONECUT3 (ENSPKIG00000001423)	OSBPL9 (ENSPKIG00000001482)	ENSPKIG00000001642	lurap1 (ENSPKIG00000001725)	ENSPKIG00000001741	dhcr24 (ENSPKIG00000001778)	USP24 (ENSPKIG00000001856)	bloc1s2 (ENSPKIG00000001971)
Clupeocephala	DUPLICATION
Clupeocephala	DUPLICATION
Clupeocephala	ANCESTRAL SPECIES	308															ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000161753	ENSGT00400000024256	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b
Otomorpha	ANCESTRAL SPECIES	75															ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000161753	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b.a	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b	ENSGT00940000155451
Otophysi	ANCESTRAL SPECIES	3	ENSGT00950000182900.D	ENSGT01080000257720	ENSGT01030000234599.a.b.d.a.b.b	ENSGT01030000234599.a.b.d.b.a.a	ENSGT00950000183116.b.a.a.a.a	ENSGT00940000154368.s	ENSGT00940000166346	ENSGT01050000244890.a.a.b	ENSGT00940000158452	ENSGT00390000006103	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b.a	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b	ENSGT00940000155451	ENSGT00390000010993
Characiphysae	ANCESTRAL SPECIES	139				ENSGT01030000234599.a.b.d.b.a.a	ENSGT00950000183116.b.a.a.a.a	ENSGT00940000154368.s	ENSGT00940000166346	ENSGT01050000244890.a.a.b	ENSGT00940000158452	ENSGT00390000006103	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b.a	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b	ENSGT00940000155451	ENSGT00390000010993
Characiphysae_b	ANCESTRAL SPECIES	133				ENSGT01030000234599.a.b.d.b.a.a	ENSGT00950000183116.b.a.a.a.a	ENSGT00940000154368.s	ENSGT00940000166346	ENSGT01050000244890.a.a.b	ENSGT00940000158452	ENSGT00390000006103	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b.a	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b	ENSGT00940000155451	ENSGT00390000010993
Characoidei	ANCESTRAL SPECIES	293				ENSGT01030000234599.a.b.d.b.a.a	ENSGT00950000183116.b.a.a.a.a	ENSGT00940000154368.s	ENSGT00940000166346	ENSGT01050000244890.a.a.b	ENSGT00940000158452	ENSGT00390000006103	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00940000164530	ENSGT00940000155404.i.a #22
Red-bellied piranha	MODERN SPECIES	1897																insra (ENSPNAG00000010896) #22
Mexicana tetra	MODERN SPECIES	1098	ENSAMXG00000040333	zgc:66427 (ENSAMXG00000034872)	ENSAMXG00000041925	ENSAMXG00000034504	parp2 (ENSAMXG00000004311)	ENSAMXG00000039184	sdr39u1 (ENSAMXG00000033100)	ltb4r2b (ENSAMXG00000003120)	ENSAMXG00000033677	ENSAMXG00000001788	ENSAMXG00000001765	MYADM (ENSAMXG00000026084)	ENSAMXG00000001747	mfsd14a2 (ENSAMXG00000001721)	ENSAMXG00000036349	insra (ENSAMXG00000001680) #22
Electric eel	MODERN SPECIES	375				apol1 (ENSEEEG00000012980)	ENSEEEG00000012981	hbl4 (ENSEEEG00000012991)	zgc:66427 (ENSEEEG00000012993)	ENSEEEG00000012996	parp2 (ENSEEEG00000013018)	ENSEEEG00000013108	sdr39u1 (ENSEEEG00000013113)	ENSEEEG00000013114	MYADM (ENSEEEG00000013115)	ENSEEEG00000013117	mfsd14a2 (ENSEEEG00000013125)	insra (ENSEEEG00000013256) #22	arhgef18a (ENSEEEG00000015375) #21	sppl2 (ENSEEEG00000015387)	ENSEEEG00000015653	ENSEEEG00000015656	prkci (ENSEEEG00000015700)	ENSEEEG00000016292	nadkb (ENSEEEG00000016295)	sec62 (ENSEEEG00000016350)
Channel catfish	MODERN SPECIES	26	ENSIPUG00000016176	OPRK1 (ENSIPUG00000016161)	chmp5b (ENSIPUG00000016007)	fastkd3 (ENSIPUG00000015991)	ENSIPUG00000015968	MYOM1 (ENSIPUG00000015512)	zgc:66427 (ENSIPUG00000015463)	ENSIPUG00000015449	parp2 (ENSIPUG00000015405)	mettl17 (ENSIPUG00000015340)	sdr39u1 (ENSIPUG00000015289)	ltb4r2b (ENSIPUG00000015281)	ENSIPUG00000015251	MYADM (ENSIPUG00000015239)	ENSIPUG00000015140	insra (ENSIPUG00000015045) #22	ENSIPUG00000015030	arhgef18a (ENSIPUG00000014965) #21	sppl2 (ENSIPUG00000014945)	DAPK3 (ENSIPUG00000014879)	ENSIPUG00000014869	ing5b (ENSIPUG00000014801)	pak2a (ENSIPUG00000014747)	KLHL6 (ENSIPUG00000014694)	ENSIPUG00000014741	pdcd10b (ENSIPUG00000014616)	SLITRK3 (ENSIPUG00000014591)	NRDC (ENSIPUG00000014405)	ifi44c2 (ENSIPUG00000014380)	apoda.1 (ENSIPUG00000014347)	copa (ENSIPUG00000014257)
Cyprinoidei	ANCESTRAL SPECIES	1	ENSGT00950000183116.b.a.a.a.a	ENSGT00950000183116.b.a.a.b.a.b.e.b	ENSGT00940000154368.s.b	ENSGT00940000154368.s.a.a	ENSGT00950000183116.b.b.f	ENSGT00940000166346	ENSGT01050000244890.a.a.b	ENSGT00940000158452	ENSGT00390000006103	ENSGT00390000000337	ENSGT00950000182966.C.b.a	ENSGT00940000160923	ENSGT00950000182933.C.i	ENSGT00940000156845	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b.a	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b	ENSGT00940000155451	ENSGT00390000010993
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	127	ENSGT01030000234599.a.b.d.a.b.b.h	ENSGT01030000234599.a.b.d.b.a.a.e	ENSGT00950000183116.b.a.a.a.a.e	ENSGT00950000183116.b.a.a.b.a.b.e.b	ENSGT00940000166346.b	ENSGT01050000244890.a.a.b	ENSGT00940000158452.c	ENSGT00390000006103.d	ENSGT00390000000337.k	ENSGT00950000182966.C.b.a.n	ENSGT00940000160923.c	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f.b	ENSGT00950000182933.C.i.b	ENSGT00940000156845.xc.b	ENSGT00940000164530.a	ENSGT00940000155404.i.a.a #22	ENSGT00940000157375.d.b #21	ENSGT00940000158753.c.a	ENSGT00940000161753	ENSGT00390000001700.b.f	ENSGT00940000162952.d.b.b.a.a	ENSGT00940000153497.E.a	ENSGT00940000158435.db.a	ENSGT00390000015520.a	ENSGT00940000165431.b	ENSGT00390000002757.a	ENSGT00940000160075.c	ENSGT00510000046981.a.a.h	ENSGT00510000046981.b.b.a.b	ENSGT00940000155451.v	ENSGT00390000010993.q
Cyprininae_a	ANCESTRAL SPECIES	145	ENSGT01030000234599.a.b.d.a.b.b.h	ENSGT01030000234599.a.b.d.b.a.a.e	ENSGT00950000183116.b.a.a.a.a.e	ENSGT00950000183116.b.a.a.b.a.b.e.b	ENSGT00940000166346.b	ENSGT01050000244890.a.a.b	ENSGT00940000158452.c	ENSGT00390000006103.d	ENSGT00390000000337.k	ENSGT00950000182966.C.b.a.n	ENSGT00940000160923.c	ENSGT01100000263516.a.b.b.b.b.a.a.a.a.b.f.b	ENSGT00950000182933.C.i.b	ENSGT00940000156845.xc.b	ENSGT00940000164530.a	ENSGT00940000155404.i.a.a #22	ENSGT00940000157375.d.b #21	ENSGT00940000158753.c.a	ENSGT00940000153424.a.a.d.b	ENSGT00390000001700.b.f	ENSGT00940000162952.d.b.b.a.b	ENSGT00940000153497.E.a	ENSGT00940000158435.db.a	ENSGT00390000015520.a	ENSGT00940000165431.b	ENSGT00390000002757.a	ENSGT00940000160075.c	ENSGT00510000046981.a.a.h.a	ENSGT00510000046981.a.a.h.b	ENSGT00510000046981.b.b.a.b	ENSGT00940000155451.v
Common carp reference	MODERN SPECIES	29	ENSCCRG00000033418	ENSCCRG00000057446	ENSCCRG00000025873	ENSCCRG00000065417	hbl4 (ENSCCRG00000062137)	zgc:66427 (ENSCCRG00000025860)	cbln13 (ENSCCRG00000061813)	parp2 (ENSCCRG00000038744)	ENSCCRG00000038942	sdr39u1 (ENSCCRG00000082837)	ltb4r2b (ENSCCRG00000039148)	ENSCCRG00000039152	ENSCCRG00000055373	ENSCCRG00000039170	mfsd14a2 (ENSCCRG00000058324)	insra (ENSCCRG00000029353) #22	arhgef18a (ENSCCRG00000029300) #21	sppl2 (ENSCCRG00000082537)	ENSCCRG00000079977	ENSCCRG00000007428	ENSCCRG00000007431	prkci (ENSCCRG00000031723)	ENSCCRG00000020313	gpr160 (ENSCCRG00000064130)	nadkb (ENSCCRG00000005597)	sec62 (ENSCCRG00000064194)	ENSCCRG00000082654	ENSCCRG00000029821	apoda.1 (ENSCCRG00000029824)	copa (ENSCCRG00000020327)	copa (ENSCCRG00000029263)
Golden-line barbel	MODERN SPECIES	140	ENSSGRG00000039725	ENSSGRG00000039584	ENSSGRG00000039582	ENSSGRG00000039580	cbln13 (ENSSGRG00000039579)	zgc:66427 (ENSSGRG00000039577)	ENSSGRG00000039573	parp2 (ENSSGRG00000039563)	ENSSGRG00000039551	sdr39u1 (ENSSGRG00000039546)	ENSSGRG00000039543	ENSSGRG00000039540	MYADM (ENSSGRG00000039538)	ENSSGRG00000038238	mfsd14a2 (ENSSGRG00000038232)	insra (ENSSGRG00000034275) #22	arhgef18a (ENSSGRG00000034225) #21	sppl2 (ENSSGRG00000033955)	ENSSGRG00000033950	ENSSGRG00000033949	ENSSGRG00000033948	prkci (ENSSGRG00000033117)	SKIL (ENSSGRG00000033098)	gpr160 (ENSSGRG00000033097)	nadkb (ENSSGRG00000032808)	sec62 (ENSSGRG00000032800)	samd7 (ENSSGRG00000032799)	apoda.2 (ENSSGRG00000032784)	copa (ENSSGRG00000032664)	pex19 (ENSSGRG00000032662)	tspan37 (ENSSGRG00000032661)
Goldfish	MODERN SPECIES	19	ENSCARG00000043250	ENSCARG00000043505	ENSCARG00000043519	ENSCARG00000043553	cbln13 (ENSCARG00000043596)	zgc:66427 (ENSCARG00000043608)	ENSCARG00000043628	parp2 (ENSCARG00000043705)	sdr39u1 (ENSCARG00000045219)	ltb4r2b (ENSCARG00000045249)	NFATC4 (ENSCARG00000045293)	ENSCARG00000045405	MYADM (ENSCARG00000045417)	ENSCARG00000045494	mfsd14a2 (ENSCARG00000046137)	insra (ENSCARG00000047402) #22	arhgef18a (ENSCARG00000051036) #21	sppl2 (ENSCARG00000051159)	DAPK3 (ENSCARG00000052013)	ENSCARG00000052056	ENSCARG00000052099	ENSCARG00000052118	cpne3 (ENSCARG00000052168)	ENSCARG00000052718	MMP16 (ENSCARG00000053560)	C1QL3 (ENSCARG00000054063)	RSU1 (ENSCARG00000054093)	trdmt1 (ENSCARG00000054165)	vim (ENSCARG00000054361)	ENSCARG00000054420	ENSCARG00000054715
Cyprininae	ANCESTRAL SPECIES	71	ENSGT01030000234599.a.b.d.a.b.b.g	ENSGT01030000234599.a.b.d.b.a.a.f	ENSGT00940000169565.a	ENSGT00940000154368.s.b.c	ENSGT00940000154368.s.a.a	ENSGT00950000183116.b.b.f	ENSGT00940000166346.a	ENSGT00940000158452.d	ENSGT00390000006103.c	ENSGT00390000000337.l	ENSGT00950000182966.C.b.a.m	ENSGT00940000160923.d	ENSGT00950000182933.C.i.a	ENSGT00940000156845.xc.a	ENSGT00940000164530.b	ENSGT00940000155404.i.a.b #22	ENSGT00940000157375.d.a #21	ENSGT00940000158753.c.b	ENSGT00940000153424.a.a.d	ENSGT00400000024256.h	ENSGT00390000001700.b.e	ENSGT00940000162952.d.b.b.a.b	ENSGT00940000153497.E.b	ENSGT00940000158435.db.b	ENSGT00390000015520.b	ENSGT00940000165431.a	ENSGT00390000002757.b	ENSGT00940000160075.d	ENSGT00510000046981.a.a.g	ENSGT00510000046981.b.b.a.a	ENSGT00940000155451.u
Cyprininae_a	ANCESTRAL SPECIES	84	ENSGT01030000234599.a.b.d.a.b.b.g	ENSGT01030000234599.a.b.d.b.a.a.f	ENSGT00940000169565.a	ENSGT00940000154368.s.b.c	ENSGT00940000154368.s.a.a	ENSGT00950000183116.b.b.f	ENSGT00940000166346.a	ENSGT00940000158452.d	ENSGT00390000006103.c	ENSGT00390000000337.l	ENSGT00950000182966.C.b.a.m	ENSGT00940000160923.d	ENSGT00950000182933.C.i.a	ENSGT00940000156845.xc.a	ENSGT00940000164530.b	ENSGT00940000155404.i.a.b #22	ENSGT00940000157375.d.a #21	ENSGT00940000158753.c.b	ENSGT00940000153424.a.a.d.a	ENSGT00400000024256.h	ENSGT00390000001700.b.e	ENSGT00940000162952.d.b.b.a.a	ENSGT00940000153497.E.b	ENSGT00940000158435.db.b	ENSGT00390000015520.b	ENSGT00940000165431.a	ENSGT00390000002757.b	ENSGT00940000160075.d	ENSGT00510000046981.a.a.g	ENSGT00510000046981.b.b.a.a	ENSGT00940000155451.u
Common carp reference	MODERN SPECIES	21	apol1 (ENSCCRG00000059701)	mbl2 (ENSCCRG00000065031)	ENSCCRG00000058529	hbl4 (ENSCCRG00000038558)	ENSCCRG00000038576	zgc:66427 (ENSCCRG00000038919)	parp2 (ENSCCRG00000038924)	ENSCCRG00000038760	sdr39u1 (ENSCCRG00000066943)	ltb4r2b (ENSCCRG00000038770)	ENSCCRG00000035955	ENSCCRG00000075747	ENSCCRG00000061728	ENSCCRG00000038786	mfsd14a2 (ENSCCRG00000074617)	insra (ENSCCRG00000039595) #22	arhgef18a (ENSCCRG00000013026) #21	sppl2 (ENSCCRG00000059137)	ENSCCRG00000032892	ENSCCRG00000032883	ENSCCRG00000032888	ENSCCRG00000066649	prkci (ENSCCRG00000007495)	ENSCCRG00000013267	nadkb (ENSCCRG00000042598)	gpr160 (ENSCCRG00000020315)	sec62 (ENSCCRG00000004894)	samd7 (ENSCCRG00000020324)	apoda.2 (ENSCCRG00000063977)	apoda.1 (ENSCCRG00000020325)	copa (ENSCCRG00000029759)
Golden-line barbel	MODERN SPECIES	20	ENSSGRG00000007843	apol1 (ENSSGRG00000007841)	ENSSGRG00000007838	ENSSGRG00000007831	hbl4 (ENSSGRG00000007815)	cbln13 (ENSSGRG00000007813)	zgc:66427 (ENSSGRG00000007812)	ENSSGRG00000007811	sdr39u1 (ENSSGRG00000007808)	ENSSGRG00000007807	ENSSGRG00000007804	ENSSGRG00000007802	MYADM (ENSSGRG00000007796)	ENSSGRG00000007253	mfsd14a2 (ENSSGRG00000006981)	insra (ENSSGRG00000005852) #22	sppl2 (ENSSGRG00000005601)	ENSSGRG00000005562	ENSSGRG00000005554	ENSSGRG00000005542	ENSSGRG00000005529	prkci (ENSSGRG00000002823)	SKIL (ENSSGRG00000002770)	gpr160 (ENSSGRG00000002768)	nadkb (ENSSGRG00000001352)	sec62 (ENSSGRG00000037213)	samd7 (ENSSGRG00000037212)	apoda.2 (ENSSGRG00000037206)	apoda.1 (ENSSGRG00000037205)	copa (ENSSGRG00000036780)	pex19 (ENSSGRG00000036776)
Goldfish	MODERN SPECIES	11	ENSCARG00000006316	smg7 (ENSCARG00000006511)	nmnat2 (ENSCARG00000009303)	LAMC2 (ENSCARG00000009339)	lamc1 (ENSCARG00000009498)	dhx9 (ENSCARG00000010493)	RASAL2 (ENSCARG00000010540)	ankrd45 (ENSCARG00000010721)	DYNLT4 (ENSCARG00000010728)	plk3 (ENSCARG00000010756)	cacybp (ENSCARG00000011244)	tnn (ENSCARG00000011266)	tnr (ENSCARG00000011351)	ENSCARG00000011708	ENSCARG00000011728	insra (ENSCARG00000011804) #22	arhgef18a (ENSCARG00000012838) #21	sppl2 (ENSCARG00000012911)	DAPK3 (ENSCARG00000014316)	ENSCARG00000014321	ENSCARG00000014336	prkci (ENSCARG00000014421)	SKIL (ENSCARG00000016657)	gpr160 (ENSCARG00000016665)	nadkb (ENSCARG00000016688)	sec62 (ENSCARG00000017415)	ENSCARG00000017454	samd7 (ENSCARG00000017457)	apoda.2 (ENSCARG00000017478)	apoda.1 (ENSCARG00000017484)	copa (ENSCARG00000017510)
Zebrafish	MODERN SPECIES	11	ENSDARG00000094681	mbl2 (ENSDARG00000068220)	hbl4 (ENSDARG00000054202)	cbln13 (ENSDARG00000026904)	zgc:66427 (ENSDARG00000023303)	ENSDARG00000053836	parp2 (ENSDARG00000079202)	ENSDARG00000103889	sdr39u1 (ENSDARG00000099617)	ltb4r2b (ENSDARG00000054170)	NFATC4 (ENSDARG00000054162)	ENSDARG00000005327	MYADM (ENSDARG00000038709)	ENSDARG00000077410	mfsd14a2 (ENSDARG00000013117)	insra (ENSDARG00000011948) #22	arhgef18a (ENSDARG00000011157) #21	sppl2 (ENSDARG00000030448)	DAPK3 (ENSDARG00000074447)	ENSDARG00000095608	ENSDARG00000095191	ENSDARG00000060395	ENSDARG00000074604	prkci (ENSDARG00000021225)	SKIL (ENSDARG00000023933)	gpr160 (ENSDARG00000038700)	nadkb (ENSDARG00000060362)	sec62 (ENSDARG00000019951)	samd7 (ENSDARG00000060354)	apoda.1 (ENSDARG00000060345)	apoda.2 (ENSDARG00000060350)
Clupeiformes	ANCESTRAL SPECIES	290															ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b.a	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.k	ENSGT00510000046981.b.b	ENSGT00940000155451	ENSGT00390000010993
Denticle herring	MODERN SPECIES	14	usp33 (ENSDCDG00000017122)	zzz3 (ENSDCDG00000017129)	ak5 (ENSDCDG00000017139)	pigk (ENSDCDG00000017167)	ST6GALNAC5 (ENSDCDG00000018420)	st6galnac3 (ENSDCDG00000018423)	cope (ENSDCDG00000018431)	fastk (ENSDCDG00000018490)	tfr1a (ENSDCDG00000018503)	ENSDCDG00000018517	adipoqb (ENSDCDG00000018534)	ENSDCDG00000018542	rab18b (ENSDCDG00000018597)	ENSDCDG00000018611	mfsd14a2 (ENSDCDG00000018649)	insra (ENSDCDG00000019217) #22	arhgef18a (ENSDCDG00000028320) #21	sppl2 (ENSDCDG00000028324)	ENSDCDG00000028516	DAPK3 (ENSDCDG00000028517)	ENSDCDG00000028518	ENSDCDG00000028520	ENSDCDG00000028525	prkci (ENSDCDG00000028549)	ENSDCDG00000028674	gpr160 (ENSDCDG00000028676)	nadkb (ENSDCDG00000028682)	sec62 (ENSDCDG00000028868)	samd7 (ENSDCDG00000028871)	apoda.2 (ENSDCDG00000028879)	apoda.1 (ENSDCDG00000028889)
Atlantic herring	MODERN SPECIES	14	ENSCHAG00000025964	cbln12 (ENSCHAG00000025953)	chd8 (ENSCHAG00000024247)	ENSCHAG00000024154	ENSCHAG00000024150	ENSCHAG00000024144	casq1a (ENSCHAG00000023997)	ENSCHAG00000023957	DCAF8 (ENSCHAG00000023736)	ENSCHAG00000023720	ENSCHAG00000023717	ENSCHAG00000023713	apol1 (ENSCHAG00000023655)	NFATC4 (ENSCHAG00000023644)	ltb4r2b (ENSCHAG00000023638)	insra (ENSCHAG00000021370) #22	arhgef18a (ENSCHAG00000021225) #21	sppl2 (ENSCHAG00000021099)	DAPK3 (ENSCHAG00000021006)	ENSCHAG00000020991	ENSCHAG00000020976	prkci (ENSCHAG00000019443)	ENSCHAG00000019389	gpr160 (ENSCHAG00000019378)	nadkb (ENSCHAG00000018963)	sec62 (ENSCHAG00000018933)	ENSCHAG00000018907	samd7 (ENSCHAG00000018894)	apoda.2 (ENSCHAG00000018732)	APOD (ENSCHAG00000018480)	apoda.1 (ENSCHAG00000018404)
Euteleosteomorpha	ANCESTRAL SPECIES	97						ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT01030000236342	ENSGT00400000024256	ENSGT00390000001700.b	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a
Protacanthopterygii	DUPLICATION
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	30														ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000155404.i.a.c.a #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.n	ENSGT00390000011943.b.o	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT00940000165445	ENSGT01030000234590.A.b.a.a	ENSGT00940000155866	ENSGT00940000174919	ENSGT00390000015458	ENSGT00950000182930.A.b.k.b
Salmoninae	ANCESTRAL SPECIES	1542																ENSGT00940000155404.i.a.c.a #22	ENSGT00940000157375.c.j #21
Huchen	DUPLICATION
Huchen	MODERN SPECIES	3677																ENSHHUG00000025255 #22
Huchen	MODERN SPECIES	1315																insra (ENSHHUG00000000739) #22	ENSHHUG00000000671 #21	ENSHHUG00000000660	rpl36 (ENSHHUG00000000624)	wwtr1 (ENSHHUG00000000614)	tm4sf4 (ENSHHUG00000000611)	ENSHHUG00000000603
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.c.a #22
Salmo	ANCESTRAL SPECIES	64	ENSGT00940000164867.b.a.b	ENSGT01070000254044	ENSGT00940000156309.A.l.d	ENSGT00390000015458.e	ENSGT00940000174919	ENSGT01030000234590.A.b.a.a.c	ENSGT00940000165445	ENSGT01030000234590.A.b.b.a	ENSGT00510000046760.b.e	ENSGT00990000210423	ENSGT00390000011943.b.n	ENSGT00940000157375.c.j #21	ENSGT00730000111078.c	ENSGT00940000158252	ENSGT00530000064273.a.b.q	ENSGT00940000155404.i.a.c.a #22	ENSGT01100000263614.h	ENSGT00940000164903.a.f.b	ENSGT00940000159991.A.a.r.a	ENSGT00940000158525.u.f	ENSGT00940000165613.c.b	ENSGT01010000222313.A.b.b.a.a.a.a	ENSGT00390000008969.c	ENSGT00940000161103.a.b	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000154308.A.a.a.a.e.a	ENSGT01080000259813	ENSGT00390000015229.v	ENSGT00390000005976.b.e	ENSGT00940000157795.g.b.f	ENSGT00950000183191.a.a.e.a.b
River trout	MODERN SPECIES	33	senp5 (ENSSTUG00000000177)	ENSSTUG00000000082	hps3 (ENSSTUG00000000077)	ENSSTUG00000000056	ENSSTUG00000051025	tm4sf4 (ENSSTUG00000051024)	wwtr1 (ENSSTUG00000051023)	ENSSTUG00000051022	rpl36 (ENSSTUG00000051021)	ENSSTUG00000051020 #21	zranb2 (ENSSTUG00000051019)	adgrl4 (ENSSTUG00000051018)	ENSSTUG00000051017	ENSSTUG00000039656	CLDN18 (ENSSTUG00000039100)	insra (ENSSTUG00000036381) #22	ENSSTUG00000036301	ENSSTUG00000036273	ENSSTUG00000036252	ENSSTUG00000036009	ENSSTUG00000035959	nlk1 (ENSSTUG00000035749)	TLCD3B (ENSSTUG00000035730)	mvp (ENSSTUG00000035104)	ENSSTUG00000035069	ENSSTUG00000035060	ENSSTUG00000035056	ENSSTUG00000035053	ENSSTUG00000035041	sgf29 (ENSSTUG00000034841)	spns1 (ENSSTUG00000034541)
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000075676	ENSSSAG00000082287	dlg1a (ENSSSAG00000075520)	ENSSSAG00000075502	ENSSSAG00000111881	ENSSSAG00000075476	ENSSSAG00000075456	ENSSSAG00000075446	ENSSSAG00000075433	RL36 (ENSSSAG00000075425)	ENSSSAG00000075417 #21	ENSSSAG00000075410	adgrl4 (ENSSSAG00000075371)	ENSSSAG00000054140	ENSSSAG00000053522	ENSSSAG00000052155 #22	ENSSSAG00000099342	ENSSSAG00000008130	ENSSSAG00000076984	ENSSSAG00000075864	ENSSSAG00000113341	nlk1 (ENSSSAG00000003453)	ENSSSAG00000075483	MVP (ENSSSAG00000074980)	ENSSSAG00000074949	ENSSSAG00000074945	ENSSSAG00000074942	ENSSSAG00000088612	sgf29 (ENSSSAG00000060403)	spns1 (ENSSSAG00000074853)	ENSSSAG00000074838
Oncorhynchus	ANCESTRAL SPECIES		ENSGT00950000183191.a.a.e.a.b	ENSGT00940000157795.g.b.f	ENSGT00390000005976.b.e	ENSGT00390000015229.v	ENSGT00530000064242.a.m	ENSGT00940000154308.A.a.a.a.e.a	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000161103.a.b	ENSGT00390000008969.c	ENSGT01010000222313.A.b.b.a.a.a.b.b	ENSGT00940000165613.c	ENSGT00940000158525.u.f	ENSGT00940000159991.A.a.r.a	ENSGT00940000164903.a.f.b	ENSGT01100000263614.h	ENSGT00940000155404.i.a.c.a #22	ENSGT00940000158655.e	ENSGT00530000064273.a.b.q.a	ENSGT00940000158252	ENSGT00730000111078.c	ENSGT00940000157375.c.j #21	ENSGT00390000011943.a.a	ENSGT00990000210423	ENSGT00510000046760.b.e	ENSGT01030000234590.A.b.b.a	ENSGT00940000165445	ENSGT01030000234590.A.b.a.a.c	ENSGT00390000015458.e	ENSGT00940000156309.A.l.d	ENSGT00940000164867.b.a.b	ENSGT00980000198724
Rainbow trout	MODERN SPECIES	22	nupr1b (ENSOMYG00000045779)	ENSOMYG00000045777	ENSOMYG00000073168	ENSOMYG00000045769	mvp (ENSOMYG00000045612)	ENSOMYG00000060666	ENSOMYG00000057189	nlk1 (ENSOMYG00000045480)	ENSOMYG00000045456	ENSOMYG00000047876	ENSOMYG00000045388	ENSOMYG00000048125	ENSOMYG00000045368	ENSOMYG00000045361	ENSOMYG00000068309	ENSOMYG00000040861 #22	ENSOMYG00000040168	ENSOMYG00000052760	ENSOMYG00000071797	ENSOMYG00000068286	ENSOMYG00000076282	ENSOMYG00000050014	ENSOMYG00000063774	ENSOMYG00000056182	ENSOMYG00000077605	ENSOMYG00000060035	ENSOMYG00000022656	ENSOMYG00000022601	ENSOMYG00000022583 #21	ENSOMYG00000022571	ENSOMYG00000022559
Oncorhynchus_a	ANCESTRAL SPECIES		ENSGT00950000183191.a.a.e.b	ENSGT00940000157795.g.b.f	ENSGT00390000005976.b.e	ENSGT00390000015229.v	ENSGT00530000064242.a.m	ENSGT00940000154308.A.a.a.a.e.a	ENSGT01100000263556.a.a.q.c.b.a.a.a	ENSGT00940000161103.a.b	ENSGT00390000008969.c	ENSGT01010000222313.A.b.b.a.a.a.b.b	ENSGT00940000165613.c	ENSGT00940000158525.u.f	ENSGT00940000159991.A.a.r.a	ENSGT00940000164903.a.f.b	ENSGT01100000263614.h	ENSGT00940000155404.i.a.c.a #22	ENSGT00940000158655.e	ENSGT00530000064273.a.b.q.a.c.a.a.b	ENSGT00530000064273.a.b.q.a.d	ENSGT00940000158252	ENSGT00730000111078.c	ENSGT00940000157375.c.j #21	ENSGT00390000011943.a.a	ENSGT00990000210423	ENSGT00510000046760.b.e	ENSGT01030000234590.A.b.b.a	ENSGT00940000165445	ENSGT01030000234590.A.b.a.a.c	ENSGT00390000015458.e	ENSGT00940000156309.A.l.d	ENSGT00940000164867.b.a.b
Chinook salmon	MODERN SPECIES		ENSOTSG00005034034	sgf29 (ENSOTSG00005034033)	nupr1b (ENSOTSG00005034030)	ENSOTSG00005034028	ENSOTSG00005034027	mvp (ENSOTSG00005031702)	TLCD3B (ENSOTSG00005031691)	nlk1 (ENSOTSG00005031636)	ENSOTSG00005031635	atxn2l (ENSOTSG00005031631)	spns1 (ENSOTSG00005031624)	sgf29 (ENSOTSG00005031618)	nupr1b (ENSOTSG00005031615)	ENSOTSG00005031612	ENSOTSG00005031610	insra (ENSOTSG00005031330) #22	CLDN18 (ENSOTSG00005031323)	ENSOTSG00005031321	ENSOTSG00005029155	adgrl4 (ENSOTSG00005029150)	zranb2 (ENSOTSG00005029148)	ENSOTSG00005029146 #21	rpl36 (ENSOTSG00005029145)	ENSOTSG00005029142	wwtr1 (ENSOTSG00005029141)	tm4sf4 (ENSOTSG00005029138)	ENSOTSG00005029134	ENSOTSG00005029130	hps3 (ENSOTSG00005029109)	senp5 (ENSOTSG00005029101)	dlg1a (ENSOTSG00005028081)
Coho salmon	MODERN SPECIES	1	ENSOKIG00005023879	atxn2l (ENSOKIG00005023838)	spns1 (ENSOKIG00005035236)	sgf29 (ENSOKIG00005035013)	nupr1b (ENSOKIG00005034959)	ENSOKIG00005034944	ENSOKIG00005034932	ENSOKIG00005034917	mvp (ENSOKIG00005033903)	ENSOKIG00005033830	nlk1 (ENSOKIG00005033593)	ENSOKIG00005033532	ENSOKIG00005033280	ENSOKIG00005033211	ENSOKIG00005033182	insra (ENSOKIG00005032019) #22	CLDN18 (ENSOKIG00005031911)	ENSOKIG00005031708	ENSOKIG00005017822	adgrl4 (ENSOKIG00005017245)	zranb2 (ENSOKIG00005017229)	ENSOKIG00005017197 #21	RPL36 (ENSOKIG00005017187)	wwtr1 (ENSOKIG00005017175)	tm4sf4 (ENSOKIG00005017135)	ENSOKIG00005017121	ENSOKIG00005017116	hps3 (ENSOKIG00005017104)	ENSOKIG00005017079	dlg1a (ENSOKIG00005011690)	ENSOKIG00005011312
Northern pike	MODERN SPECIES	7	phb2b (ENSELUG00000019449)	ENSELUG00000026368	ptmaa (ENSELUG00000000826)	dlg1a (ENSELUG00000019322)	ENSELUG00000018947	ncbp2 (ENSELUG00000018927)	senp5 (ENSELUG00000018895)	anos1b (ENSELUG00000018865)	ENSELUG00000025725	si:ch211-262h13.5 (ENSELUG00000018806)	ENSELUG00000018798	ENSELUG00000018784	si:ch211-284e20.8 (ENSELUG00000018765)	hps3 (ENSELUG00000018716)	use1 (ENSELUG00000018674)	INSR (ENSELUG00000018619) #22	ARHGEF18 (ENSELUG00000011053) #21	LONP1 (ENSELUG00000011144)	enc3 (ENSELUG00000030410)	rpl36 (ENSELUG00000029068)	lmnb2 (ENSELUG00000011232)	commd2 (ENSELUG00000011253)	wwtr1 (ENSELUG00000011303)	tm4sf4 (ENSELUG00000011347)	ENSELUG00000028515	TM4SF1 (ENSELUG00000011362)	cp (ENSELUG00000011461)	ENSELUG00000011504	ENSELUG00000032885	olfml2ba (ENSELUG00000011552)	atf6 (ENSELUG00000011591)
Protacanthopterygii	ANCESTRAL SPECIES	30															ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000155404.i.a.c.a #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.n	ENSGT00390000011943.b.o	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b	ENSGT01030000234590.A.b.b	ENSGT00940000165445	ENSGT01030000234590.A.b.a.a	ENSGT00940000155866	ENSGT00940000174919	ENSGT00390000015458
Salmoninae	ANCESTRAL SPECIES	36	ENSGT00930000151043	ENSGT00390000004791	ENSGT00390000002738.b	ENSGT00940000164633.i.b	ENSGT00940000160168.b.b	ENSGT00940000164633.j	ENSGT00940000160168.b.a.b	ENSGT00940000161063	ENSGT00940000166054	ENSGT00940000166019.n	ENSGT00940000159221.l	ENSGT00940000157757.g.a	ENSGT00390000012166.k	ENSGT00390000012166.l	ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000157375.c.i #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.n	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b.f	ENSGT01030000234590.A.b.b.b	ENSGT01030000234590.A.b.a.a.d	ENSGT00940000155866	ENSGT00390000015458.f	ENSGT00950000182930.A.b.k.b	ENSGT00950000182930.A.b.k.a	ENSGT00950000182930.C.f	ENSGT00950000182930.D
Huchen	DUPLICATION
Huchen	MODERN SPECIES	3747																ENSHHUG00000034595 #22
Huchen	MODERN SPECIES	5478																INSR (ENSHHUG00000006505) #22
Salmoninae_a	ANCESTRAL SPECIES	46	ENSGT00940000160168.b.b	ENSGT00930000151043	ENSGT00390000004791	ENSGT00390000002738.b	ENSGT00940000164633.i.b	ENSGT00940000164633.j	ENSGT00940000160168.b.a.b	ENSGT00940000161063	ENSGT00940000166054	ENSGT00940000166019.n	ENSGT00940000159221.l	ENSGT00940000157757.g.a	ENSGT00390000012166.k	ENSGT00390000012166.l	ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000157375.c.i #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.n	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b.f	ENSGT01030000234590.A.b.b.b	ENSGT01030000234590.A.b.a.a.d	ENSGT00940000155866	ENSGT00390000015458.f	ENSGT00950000182930.A.b.k.b	ENSGT00950000182930.A.b.k.a	ENSGT00950000182930.C.f	ENSGT00950000182930.D
Salmo	ANCESTRAL SPECIES	20	ENSGT00940000160703	ENSGT00940000160168.b.b	ENSGT00930000151043	ENSGT00390000004791	ENSGT00390000002738.b	ENSGT00940000164633.i.b	ENSGT00940000164633.j	ENSGT00940000161063	ENSGT00940000166054	ENSGT00940000166019.n	ENSGT00940000159221.l	ENSGT00940000157757.g.a	ENSGT00390000012166.k	ENSGT00390000012166.l	ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000157375.c.i #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.o	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b.f	ENSGT01030000234590.A.b.b.b	ENSGT01030000234590.A.b.a.a.d	ENSGT00940000155866	ENSGT00390000015458.f	ENSGT00950000182930.A.b.k.b	ENSGT00950000182930.A.b.k.a	ENSGT00950000182930.C.f	ENSGT00950000182930.D
River trout	MODERN SPECIES	14	scyl3 (ENSSTUG00000029775)	si:dkey-97o5.1 (ENSSTUG00000029621)	si:dkey-51e6.1 (ENSSTUG00000029600)	SELE (ENSSTUG00000029590)	ENSSTUG00000029493	ENSSTUG00000029485	ENSSTUG00000029428	lmx1a (ENSSTUG00000029418)	ENSSTUG00000029410	atf6 (ENSSTUG00000029339)	olfml2ba (ENSSTUG00000029316)	ENSSTUG00000029302	ENSSTUG00000029292	use1 (ENSSTUG00000029273)	ENSSTUG00000029256	INSR (ENSSTUG00000028389) #22	ENSSTUG00000028345	ENSSTUG00000028204 #21	enc3 (ENSSTUG00000028176)	LONP1 (ENSSTUG00000028067)	rpl36 (ENSSTUG00000028053)	lmnb2 (ENSSTUG00000027842)	commd2 (ENSSTUG00000027825)	wwtr1 (ENSSTUG00000027815)	tm4sf4 (ENSSTUG00000027802)	ENSSTUG00000027797	cp (ENSSTUG00000026621)	hps3 (ENSSTUG00000026507)	si:ch211-284e20.8 (ENSSTUG00000026490)	ENSSTUG00000026470	ENSSTUG00000026444
Atlantic salmon	MODERN SPECIES	1	scyl3 (ENSSSAG00000067033)	ENSSSAG00000112320	ENSSSAG00000067025	sele (ENSSSAG00000059045)	LYAM3 (ENSSSAG00000067014)	sele (ENSSSAG00000067000)	ENSSSAG00000067005	LYAM3 (ENSSSAG00000067009)	lmx1a (ENSSSAG00000084664)	ENSSSAG00000119016	atf6 (ENSSSAG00000045053)	olfml2ba (ENSSSAG00000045033)	ENSSSAG00000092891	ENSSSAG00000082801	ENSSSAG00000102025	ENSSSAG00000046893 #22	ENSSSAG00000046652 #21	ENSSSAG00000046620	ENSSSAG00000046083	ENSSSAG00000046051	lmnb2 (ENSSSAG00000043402)	commd2 (ENSSSAG00000097066)	wwtr1 (ENSSSAG00000043255)	tm4sf4 (ENSSSAG00000094666)	TM4SF18 (ENSSSAG00000043212)	cp (ENSSSAG00000042701)	hps3 (ENSSSAG00000042584)	ENSSSAG00000104617	ENSSSAG00000042547	ENSSSAG00000042532	ENSSSAG00000114648
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00940000160168.b.b	ENSGT00930000151043	ENSGT00390000004791	ENSGT00390000002738.b	ENSGT00940000164633.i.b	ENSGT00940000164633.j	ENSGT00940000160168.b.a.b	ENSGT00940000161063	ENSGT00940000166054	ENSGT00940000166019.n	ENSGT00940000159221.l	ENSGT00940000157757.g.a	ENSGT00390000012166.k	ENSGT00390000012166.l	ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000157375.c.i #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.n	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b.f	ENSGT01030000234590.A.b.b.b	ENSGT01030000234590.A.b.a.a.d	ENSGT00940000155866	ENSGT00390000015458.f	ENSGT00950000182930.A.b.k.b	ENSGT00950000182930.A.b.k.a	ENSGT00950000182930.C.f	ENSGT00950000182930.D
Rainbow trout	MODERN SPECIES	26	si:dkey-51e6.1 (ENSOMYG00000050667)	sele (ENSOMYG00000014326)	ENSOMYG00000014264	ENSOMYG00000049372	SELP (ENSOMYG00000014249)	lmx1a (ENSOMYG00000012782)	ENSOMYG00000075114	ENSOMYG00000063523	ENSOMYG00000058857	ENSOMYG00000066735	atf6 (ENSOMYG00000012753)	olfml2ba (ENSOMYG00000012744)	ENSOMYG00000012741	ENSOMYG00000012737	use1 (ENSOMYG00000012718)	ENSOMYG00000012063 #22	ENSOMYG00000072815	ENSOMYG00000011837 #21	enc3 (ENSOMYG00000011819)	ENSOMYG00000011553	ENSOMYG00000011481	ENSOMYG00000011427	commd2 (ENSOMYG00000011402)	wwtr1 (ENSOMYG00000011398)	tm4sf4 (ENSOMYG00000011397)	ENSOMYG00000022436	cp (ENSOMYG00000011255)	hps3 (ENSOMYG00000011182)	ENSOMYG00000065859	ENSOMYG00000077717	ENSOMYG00000011170
Oncorhynchus_a	ANCESTRAL SPECIES	63	ENSGT00940000155827	ENSGT00940000160703	ENSGT00940000160168.b.b	ENSGT00930000151043	ENSGT00390000004791	ENSGT00390000002738.b	ENSGT00940000164633.i.b	ENSGT00940000164633.j	ENSGT00940000160168.b.a.b	ENSGT00940000166019.n	ENSGT00940000159221.l	ENSGT00940000157757.g.a	ENSGT00390000012166.k	ENSGT00390000012166.l	ENSGT00390000014361	ENSGT00940000155404.i.a.c.b #22	ENSGT00940000157375.c.i #21	ENSGT00950000182983.B.a.a	ENSGT00530000063553.b.a	ENSGT00390000011943.b.n	ENSGT00940000160274	ENSGT00390000008489	ENSGT00510000046760.b.f	ENSGT01030000234590.A.b.b.b	ENSGT01030000234590.A.b.a.a.d	ENSGT00940000155866	ENSGT00390000015458.f	ENSGT00950000182930.A.b.k.b	ENSGT00950000182930.A.b.k.a	ENSGT00950000182930.C.f	ENSGT00950000182930.D
Coho salmon	MODERN SPECIES	4	ENSOKIG00005034627	ENSOKIG00005034748	ENSOKIG00005034794	scyl3 (ENSOKIG00005034815)	si:dkey-97o5.1 (ENSOKIG00005034837)	si:dkey-51e6.1 (ENSOKIG00005034982)	sele (ENSOKIG00005035041)	ENSOKIG00005035289	ENSOKIG00005035335	ENSOKIG00005035463	atf6 (ENSOKIG00005035975)	olfml2ba (ENSOKIG00005036037)	ENSOKIG00005036062	ENSOKIG00005036096	use1 (ENSOKIG00005036114)	INSR (ENSOKIG00005036242) #22	ENSOKIG00005037402	ENSOKIG00005037457 #21	enc3 (ENSOKIG00005037630)	LONP1 (ENSOKIG00005037704)	ENSOKIG00005038015	lmnb2 (ENSOKIG00005038070)	commd2 (ENSOKIG00005038425)	wwtr1 (ENSOKIG00005038485)	tm4sf4 (ENSOKIG00005038530)	ENSOKIG00005038543	ENSOKIG00005038562	cp (ENSOKIG00005038608)	hps3 (ENSOKIG00005038962)	ENSOKIG00005039045	ENSOKIG00005039099
Chinook salmon	MODERN SPECIES	29	CLDN18 (ENSOTSG00005020357)	dzip1l (ENSOTSG00005020355)	ENSOTSG00005020354	HS2ST1 (ENSOTSG00005020353)	ENSOTSG00005020352	ENSOTSG00005020351	ENSOTSG00005020350	atf6 (ENSOTSG00005020344)	ENSOTSG00005020343	ENSOTSG00005020336	ENSOTSG00005020332	ENSOTSG00005020331	ENSOTSG00005020327	use1 (ENSOTSG00005020324)	ENSOTSG00005020320	INSR (ENSOTSG00005020317) #22	sqor (ENSOTSG00005019300)	ENSOTSG00005019299	EIF3J (ENSOTSG00005019298)	ENSOTSG00005029374	tp53i11b (ENSOTSG00005029369)	enc3 (ENSOTSG00005029366)	LONP1 (ENSOTSG00005029033)	lmnb2 (ENSOTSG00005029017)	commd2 (ENSOTSG00005029014)	ENSOTSG00005029011	wwtr1 (ENSOTSG00005029006)	tm4sf4 (ENSOTSG00005029002)	ENSOTSG00005028996	cp (ENSOTSG00005028973)	ENSOTSG00005028968
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	32	ENSGT00940000160466.c	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b.c	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.nc.a	ENSGT00940000156845.nc.b	ENSGT00940000164530	ENSGT00940000155404.i.a.d.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b.g	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00940000161304.a.b.a.b	ENSGT00940000161304.a.b.b	ENSGT00940000156073.c.a.b	ENSGT00940000154327.a
Salmoninae	ANCESTRAL SPECIES	111														ENSGT00940000156845.nc.b	ENSGT00940000164530.c	ENSGT00940000155404.i.a.d.a #22	ENSGT00940000157375.d.d #21	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00400000024256.b	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b	ENSGT00940000155795.e.b
Salmoninae_a	ANCESTRAL SPECIES	2	ENSGT00940000156523.b.d.c	ENSGT00940000157113.d.g	ENSGT00410000025695.a.c	ENSGT00940000158050.h.a.b	ENSGT00390000009230.b.f	ENSGT00390000005847.e	ENSGT00940000160466.d	ENSGT00940000157246.a.e	ENSGT00940000164495.c.a.e	ENSGT00940000155438.a.p	ENSGT00940000163917.a.b.d	ENSGT00940000154779.a.a.c.g	ENSGT00940000156845.nc.b	ENSGT00940000164530.d.b	ENSGT00940000164530.c	ENSGT00940000155404.i.a.d.a #22	ENSGT00940000157375.d.d #21	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00400000024256.b	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000166147.e	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b
Salmo	ANCESTRAL SPECIES	5						ENSGT00940000158588.d.b.a	ENSGT00390000005847.e	ENSGT00940000160466.d	ENSGT00940000157246.a.e	ENSGT00940000164495.c.a.e	ENSGT00940000155438.a.p.b	ENSGT00940000163917.a.b.d	ENSGT00940000154779.a.a.c.g	ENSGT00940000156845.nc.b	ENSGT00940000164530.c	ENSGT00940000155404.i.a.d.a #22	ENSGT00940000157375.d.d #21	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00400000024256.b	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b	ENSGT00940000155795.e.b	ENSGT00940000159779.e.a
River trout	MODERN SPECIES	24			ranbp3b (ENSSTUG00000013992)	pnhd (ENSSTUG00000014012)	CIB3 (ENSSTUG00000014024)	ENSSTUG00000014051	ENSSTUG00000014075	klf2b (ENSSTUG00000014079)	ENSSTUG00000003644	ENSSTUG00000003854	ENSSTUG00000004109	rx2 (ENSSTUG00000004382)	loxl5b (ENSSTUG00000004422)	ENSSTUG00000004907	mfsd14a2 (ENSSTUG00000005195)	insra (ENSSTUG00000006907) #22	ENSSTUG00000007201	arhgef18a (ENSSTUG00000007211) #21	sppl2 (ENSSTUG00000007325)	lsm7 (ENSSTUG00000007668)	DAPK3 (ENSSTUG00000007714)	ENSSTUG00000007777	ENSSTUG00000007789	ENSSTUG00000007812	prkci (ENSSTUG00000007919)	SKIL (ENSSTUG00000009992)	SHISAL2A (ENSSTUG00000010001)	ENSSTUG00000010004	slc1a7a (ENSSTUG00000010011)	ENSSTUG00000010065	KCNJ10 (ENSSTUG00000010077)
Atlantic salmon	MODERN SPECIES	22	ENSSSAG00000081319	ENSSSAG00000081329	ENSSSAG00000101882	ENSSSAG00000081335	ENSSSAG00000049450	ENSSSAG00000049420	ENSSSAG00000049412	ENSSSAG00000049378	ENSSSAG00000049340	KLF2 (ENSSSAG00000049310)	ENSSSAG00000085860	ENSSSAG00000049280	ENSSSAG00000049254	ENSSSAG00000046454	mfsd14a2 (ENSSSAG00000045290)	insra (ENSSSAG00000041161) #22	arhgef18a (ENSSSAG00000040945) #21	sppl2 (ENSSSAG00000040696)	ENSSSAG00000096514	ENSSSAG00000040414	ENSSSAG00000116265	phc3 (ENSSSAG00000040282)	prkci (ENSSSAG00000009136)	ENSSSAG00000110903	ENSSSAG00000008713	ENSSSAG00000121333	ENSSSAG00000008079	ENSSSAG00000008027	ENSSSAG00000008002	kirrel1b (ENSSSAG00000007375)	ENSSSAG00000107492
Oncorhynchus	ANCESTRAL SPECIES	11								ENSGT00940000158588.d.b.a	ENSGT00950000183067.a.b.b.vb.b	ENSGT00390000005847.e	ENSGT00940000160466.d	ENSGT00940000164495.c.a.e	ENSGT00940000154779.a.a.c.g	ENSGT00940000156845.nc.b	ENSGT00940000164530.d.b	ENSGT00940000155404.i.a.d.a #22	ENSGT00940000157375.d.d #21	ENSGT00940000158753.g.a	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b	ENSGT00940000155795.e.b
Oncorhynchus_a	ANCESTRAL SPECIES	24	ENSGT00950000183104.B.a.b.a.a.a	ENSGT00940000162487.s.b	ENSGT00950000182925.C.a.a.c.a	ENSGT00940000156523.b.d.c	ENSGT00940000157113.d.g	ENSGT00410000025695.a.c	ENSGT00940000158050.h.a.b	ENSGT00940000158588.d.b.a	ENSGT00950000183067.a.b.b.vb.b	ENSGT00390000005847.e	ENSGT00940000160466.d	ENSGT00940000164495.c.a.e	ENSGT00940000154779.a.a.c.g	ENSGT00940000156845.nc.b	ENSGT00940000164530.d.b	ENSGT00940000155404.i.a.d.a #22	ENSGT00940000157375.d.d #21	ENSGT00940000158753.h	ENSGT00510000047872.s	ENSGT00940000161753.f.b	ENSGT00940000153424.a.a.d	ENSGT00390000001700.b.g.a	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E.c	ENSGT00940000158435.o	ENSGT00940000161304.a.b.b.a	ENSGT00940000156073.c.a.b.d	ENSGT00940000154446.b.a.a.b.b	ENSGT00990000203615.b.a.a.a.a.g.b.b	ENSGT00940000155795.e.b
Chinook salmon	MODERN SPECIES	20	ENSOTSG00005016321	ENSOTSG00005016320	sf3a2 (ENSOTSG00005016319)	fzr1a (ENSOTSG00005016057)	ENSOTSG00005016051	ENSOTSG00005016048	ENSOTSG00005016037	rnf126 (ENSOTSG00005016028)	ENSOTSG00005016017	stk11 (ENSOTSG00005016016)	klf2b (ENSOTSG00005016015)	loxl5b (ENSOTSG00005016013)	ENSOTSG00005013380	ENSOTSG00005013371	ENSOTSG00005013370	insra (ENSOTSG00005012927) #22	arhgef18a (ENSOTSG00005012924) #21	ENSOTSG00005012923	lsm7 (ENSOTSG00005012920)	ENSOTSG00005012919	ENSOTSG00005012918	ENSOTSG00005012916	prkci (ENSOTSG00005009959)	ENSOTSG00005009953	SHISAL2A (ENSOTSG00005009952)	slc1a7a (ENSOTSG00005009951)	ENSOTSG00005009950	KCNJ10 (ENSOTSG00005009949)	kirrel1b (ENSOTSG00005009843)	cadm3 (ENSOTSG00005009837)	sdhc (ENSOTSG00005009834)
Coho salmon	MODERN SPECIES	19	ENSOKIG00005037950	ENSOKIG00005037904	ENSOKIG00005037877	ENSOKIG00005037817	RNF126 (ENSOKIG00005037713)	ENSOKIG00005048082	STK11 (ENSOKIG00005048064)	RANBP3 (ENSOKIG00005048041)	ENSOKIG00005048011	pnhd (ENSOKIG00005048003)	CIB3 (ENSOKIG00005047974)	ENSOKIG00005047964	ENSOKIG00005047957	ENSOKIG00005047674	ENSOKIG00005047609	INSR (ENSOKIG00005047213) #22	arhgef18a (ENSOKIG00005047139) #21	ENSOKIG00005047124	lsm7 (ENSOKIG00005047106)	DAPK3 (ENSOKIG00005047035)	ENSOKIG00005047009	ENSOKIG00005046995	ENSOKIG00005046986	ENSOKIG00005046981	prkci (ENSOKIG00005045540)	ENSOKIG00005045456	SHISAL2A (ENSOKIG00005045449)	SLC1A7 (ENSOKIG00005045439)	ENSOKIG00005045432	KCNJ10 (ENSOKIG00005045421)	kirrel1b (ENSOKIG00005045019)
Rainbow trout	MODERN SPECIES	20			ENSOMYG00000039017	ENSOMYG00000058698	ENSOMYG00000039052	ENSOMYG00000039107	ENSOMYG00000018681	ENSOMYG00000075386	ENSOMYG00000039162	ENSOMYG00000039184	ENSOMYG00000060329	ENSOMYG00000039199	ENSOMYG00000052784	ENSOMYG00000039448	ENSOMYG00000062070	insra (ENSOMYG00000039979) #22	arhgef18a (ENSOMYG00000040765) #21	sppl2 (ENSOMYG00000040811)	ENSOMYG00000040895	ENSOMYG00000040917	ENSOMYG00000040952	ENSOMYG00000062954	ENSOMYG00000040963	ENSOMYG00000063043	prkci (ENSOMYG00000041129)	ENSOMYG00000042548	ENSOMYG00000063979	ENSOMYG00000072104	ENSOMYG00000042596	ENSOMYG00000042653	ENSOMYG00000042661
Huchen	MODERN SPECIES	94														ENSHHUG00000050599	mfsd14a2 (ENSHHUG00000050575)	insra (ENSHHUG00000050183) #22	arhgef18a (ENSHHUG00000050150) #21	sppl2 (ENSHHUG00000050122)	lsm7 (ENSHHUG00000050071)	DAPK3 (ENSHHUG00000050062)	ENSHHUG00000050052	ENSHHUG00000050045	ENSHHUG00000050034	prkci (ENSHHUG00000049789)	SKIL (ENSHHUG00000049776)	ENSHHUG00000049772	slc1a7a (ENSHHUG00000049761)	ENSHHUG00000049754	KCNJ10 (ENSHHUG00000049749)	kirrel1b (ENSHHUG00000049679)	ENSHHUG00000049675
Northern pike	MODERN SPECIES	2	rab8a (ENSELUG00000034094)	CIB3 (ENSELUG00000014416)	ENSELUG00000014399	LPL (ENSELUG00000014351)	ap1m1 (ENSELUG00000014308)	klf2b (ENSELUG00000014262)	ENSELUG00000014207	ENSELUG00000014098	rx2 (ENSELUG00000014048)	cplx4c (ENSELUG00000014015)	ATCAY (ENSELUG00000013996)	nmrk2 (ENSELUG00000013939)	loxl5b (ENSELUG00000013872)	ENSELUG00000013827	mfsd14a2 (ENSELUG00000013771)	insra (ENSELUG00000013713) #22	arhgef18a (ENSELUG00000013597) #21	sppl2 (ENSELUG00000013526)	lsm7 (ENSELUG00000000497)	ENSELUG00000013373	ENSELUG00000028866	ENSELUG00000013275	prkci (ENSELUG00000013218)	ENSELUG00000013131	gpr160 (ENSELUG00000013084)	nadkb (ENSELUG00000013005)	SHISAL2A (ENSELUG00000012967)	slc1a7a (ENSELUG00000012954)	scp2a (ENSELUG00000012894)	czib (ENSELUG00000029080)	uck2 (ENSELUG00000012833)
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.d.b #22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.d.b.a #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.d.b.a #22
Salmo	ANCESTRAL SPECIES	21	ENSGT00940000165287.a.a	ENSGT00940000160466.c	ENSGT00940000157246.a.f	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000164495.c.a.f	ENSGT00940000155438.a.o	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b.c.a	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c.h	ENSGT00940000156845.nc.a.b	ENSGT00940000164530.d.a	ENSGT00940000155404.i.a.d.b.a #22	ENSGT00940000157375.d.c #21	ENSGT00940000158753.g.b	ENSGT00510000047872.t	ENSGT00940000161753.f.a	ENSGT00390000001700.b.g.b	ENSGT00940000153497.E.d	ENSGT00940000158435.p	ENSGT00940000165431	ENSGT00940000161304.a.b.a.b	ENSGT00940000156073.c.a.b.c	ENSGT00940000154327.a	ENSGT00390000001523	ENSGT01020000230412.A.c.b.c.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.b	ENSGT01100000263556.a.a.q.c.a
Atlantic salmon	MODERN SPECIES	5	rab8a (ENSSSAG00000110185)	TPM4 (ENSSSAG00000064967)	ENSSSAG00000064905	ENSSSAG00000103555	klf2b (ENSSSAG00000064886)	ENSSSAG00000094895	ENSSSAG00000059374	ENSSSAG00000058499	ENSSSAG00000089063	rx2 (ENSSSAG00000083843)	ENSSSAG00000058448	NRK2 (ENSSSAG00000058436)	loxl5b (ENSSSAG00000058421)	ENSSSAG00000053891	mfsd14a2 (ENSSSAG00000047924)	insra (ENSSSAG00000043568) #22	ENSSSAG00000122003	arhgef18a (ENSSSAG00000047866) #21	ENSSSAG00000087741	ENSSSAG00000082722	sppl2 (ENSSSAG00000045632)	ENSSSAG00000091315	ENSSSAG00000045465	ENSSSAG00000115313	prkci (ENSSSAG00000042512)	ENSSSAG00000042438	nadkb (ENSSSAG00000040122)	ENSSSAG00000083186	slc1a7a (ENSSSAG00000004643)	scp2 (ENSSSAG00000004963)	czib (ENSSSAG00000005821)
River trout	MODERN SPECIES	13	CIB3 (ENSSTUG00000047349)	rab8a (ENSSTUG00000047345)	TPM4 (ENSSTUG00000047318)	LPL (ENSSTUG00000047301)	klf2b (ENSSTUG00000047295)	ENSSTUG00000046354	ENSSTUG00000046247	rx2 (ENSSTUG00000046240)	cplx4c (ENSSTUG00000046236)	ATCAY (ENSSTUG00000046207)	nmrk2 (ENSSTUG00000046177)	loxl5b (ENSSTUG00000046169)	ENSSTUG00000046101	ENSSTUG00000046087	mfsd14a2 (ENSSTUG00000045838)	insra (ENSSTUG00000041599) #22	arhgef18a (ENSSTUG00000041286) #21	sppl2 (ENSSTUG00000040470)	lsm7 (ENSSTUG00000040427)	DAPK3 (ENSSTUG00000040371)	ENSSTUG00000040344	prkci (ENSSTUG00000038904)	ENSSTUG00000038859	nadkb (ENSSTUG00000038597)	SHISAL2A (ENSSTUG00000038576)	slc1a7a (ENSSTUG00000038566)	scp2a (ENSSTUG00000038415)	czib (ENSSTUG00000038357)	uck2b (ENSSTUG00000038300)	ENSSTUG00000038288	ENSSTUG00000038271
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.d.b.b.a #22
Huchen	MODERN SPECIES	1463								ENSHHUG00000047015	MIPEP (ENSHHUG00000046953)	ENSHHUG00000046943	GET1 (ENSHHUG00000046906)	ENSHHUG00000046903	SH3BGRL (ENSHHUG00000046877)	ENSHHUG00000046870	mfsd14a2 (ENSHHUG00000046868)	ENSHHUG00000046865 #22	ENSHHUG00000046864	SLA (ENSHHUG00000046853)	ENSHHUG00000046817
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	412	ENSGT00940000165287.a.a	ENSGT00940000160466.c	ENSGT00940000157246.a.f	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000164495.c.a.f	ENSGT00940000155438.a.o	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b.c.a	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c.h	ENSGT00940000156845.nc.a.b	ENSGT00940000164530.d.a	ENSGT00940000155404.i.a.d.b.b.b.a.a #22	ENSGT00940000157375.d.c #21	ENSGT00940000158753.g.b	ENSGT00510000047872.t	ENSGT00940000161753.f.a	ENSGT00390000001700.b.g.b	ENSGT00940000153497.E.d	ENSGT00940000158435.p	ENSGT00940000165431
Huchen	MODERN SPECIES	906							WDR70 (ENSHHUG00000015393)	gdnfa (ENSHHUG00000015405)	EGFLAM (ENSHHUG00000015410)	ENSHHUG00000015435	pdlim5b (ENSHHUG00000015443)	bmpr1bb (ENSHHUG00000015519)	ENSHHUG00000015586	UNC5C (ENSHHUG00000015596)	ENSHHUG00000015795	ENSHHUG00000015797 #22
Salmoninae_a	ANCESTRAL SPECIES	51	ENSGT00940000165287.a.a	ENSGT00940000160466.c	ENSGT00940000157246.a.f	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000164495.c.a.f	ENSGT00940000155438.a.o	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b.c.a	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c.h	ENSGT00940000156845.nc.a.b	ENSGT00940000164530.d.a	ENSGT00940000155404.i.a.d.b.b.b.a.a #22	ENSGT00940000157375.d.c #21	ENSGT00940000158753.g.b	ENSGT00510000047872.t	ENSGT00940000161753.f.a	ENSGT00390000001700.b.g.b	ENSGT00940000153497.E.d	ENSGT00940000158435.p	ENSGT00940000165431	ENSGT00940000161304.a.b.a.b	ENSGT00940000156073.c.a.b.c	ENSGT00940000154327.a	ENSGT00390000001523	ENSGT01020000230412.A.c.b.c.b	ENSGT00940000154446.b.a.a.b.a.b	ENSGT01100000263556.a.a.q.c.a
Oncorhynchus	ANCESTRAL SPECIES	46	ENSGT00940000165287.a.a	ENSGT00940000160466.c	ENSGT00940000157246.a.f	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000164495.c.a.f	ENSGT00940000155438.a.o	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b.c.a	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c.h	ENSGT00940000156845.nc.a.b	ENSGT00940000164530.d.a	ENSGT00940000155404.i.a.d.b.b.b.a.a #22	ENSGT00940000157375.d.c #21	ENSGT00940000158753.g.b	ENSGT00510000047872.t	ENSGT00940000161753.f.a	ENSGT00390000001700.b.g.b	ENSGT00940000153497.E.d	ENSGT00940000158435.p	ENSGT00940000165431	ENSGT00940000161304.a.b.a.b	ENSGT00940000156073.c.a.b.c	ENSGT00940000154327.a	ENSGT00390000001523	ENSGT01020000230412.A.c.b.c.b	ENSGT00940000154446.b.a.a.b.a.b	ENSGT01100000263556.a.a.q.c.a
Rainbow trout	MODERN SPECIES	29	ENSOMYG00000002199	ENSOMYG00000037630	rx2 (ENSOMYG00000002048)	cplx4c (ENSOMYG00000002014)	ENSOMYG00000001977	nmrk2 (ENSOMYG00000001951)	loxl5b (ENSOMYG00000001888)	ENSOMYG00000077739	ENSOMYG00000075158	ENSOMYG00000048030	ENSOMYG00000077376	ENSOMYG00000057876	ENSOMYG00000059201	mfsd14a2 (ENSOMYG00000001815)	ENSOMYG00000059440	insra (ENSOMYG00000001764) #22	arhgef18a (ENSOMYG00000001704) #21	sppl2 (ENSOMYG00000001607)	ENSOMYG00000001439	ENSOMYG00000001356	ENSOMYG00000077214	ENSOMYG00000064709	ENSOMYG00000075409	prkci (ENSOMYG00000029245)	ENSOMYG00000029188	nadkb (ENSOMYG00000029107)	ENSOMYG00000057025	ENSOMYG00000065322	slc1a7a (ENSOMYG00000029088)	scp2a (ENSOMYG00000029060)	czib (ENSOMYG00000029026)
Oncorhynchus_a	ANCESTRAL SPECIES	56	ENSGT00940000165287.a.a	ENSGT00940000160466.c	ENSGT00940000157246.a.f	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000164495.c.a.f	ENSGT00940000155438.a.o	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b.c.a	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c.h	ENSGT00940000156845.nc.a.b	ENSGT00940000164530.d.a	ENSGT00940000155404.i.a.d.b.b.b.a.a #22	ENSGT00940000157375.d.c #21	ENSGT00940000158753.g.b	ENSGT00510000047872.t	ENSGT00940000161753.f.a	ENSGT00390000001700.b.g.b	ENSGT00940000153497.E.d	ENSGT00940000158435.p	ENSGT00940000165431	ENSGT00940000161304.a.b.a.b	ENSGT00940000156073.c.a.b.c	ENSGT00940000154327.a	ENSGT00390000001523	ENSGT01020000230412.A.c.b.c.b	ENSGT00940000154446.b.a.a.b.a.b	ENSGT01100000263556.a.a.q.c.a
Chinook salmon	MODERN SPECIES	1	tceanc2 (ENSOTSG00005033745)	tmem59 (ENSOTSG00005033744)	lrrc42 (ENSOTSG00005033742)	ENSOTSG00005033741	ENSOTSG00005033740	ENSOTSG00005033738	ENSOTSG00005033737	ranbp3b (ENSOTSG00005033736)	ENSOTSG00005033735	admp (ENSOTSG00005033734)	pnhd (ENSOTSG00005033733)	ENSOTSG00005033732	CIB3 (ENSOTSG00005033731)	rab8a (ENSOTSG00005033728)	tpm4b (ENSOTSG00005033626)	insra (ENSOTSG00005033612) #22	ENSOTSG00005033608	arhgef18a (ENSOTSG00005033606) #21	sppl2 (ENSOTSG00005033602)	lsm7 (ENSOTSG00005033601)	DAPK3 (ENSOTSG00005033599)	ENSOTSG00005033598	SKIL (ENSOTSG00005033597)	nadkb (ENSOTSG00005033595)	ENSOTSG00005033589	slc1a7a (ENSOTSG00005033588)	scp2a (ENSOTSG00005033565)	czib (ENSOTSG00005033561)	uck2b (ENSOTSG00005033558)	ENSOTSG00005033557	ENSOTSG00005033556
Coho salmon	MODERN SPECIES	23	ENSOKIG00005038161	CIB3 (ENSOKIG00005038110)	rab8a (ENSOKIG00005038077)	ENSOKIG00005037969	LPL (ENSOKIG00005037933)	klf2b (ENSOKIG00005037911)	ENSOKIG00005037416	ENSOKIG00005036578	rx2 (ENSOKIG00005036527)	cplx4c (ENSOKIG00005036514)	ATCAY (ENSOKIG00005036502)	nmrk2 (ENSOKIG00005036477)	loxl5b (ENSOKIG00005036426)	ENSOKIG00005036135	mfsd14a2 (ENSOKIG00005035644)	insra (ENSOKIG00005034602) #22	arhgef18a (ENSOKIG00005034541) #21	sppl2 (ENSOKIG00005033579)	LSM7 (ENSOKIG00005033425)	DAPK3 (ENSOKIG00005033366)	ENSOKIG00005036891	ENSOKIG00005036884	prkci (ENSOKIG00005035033)	SKIL (ENSOKIG00005034928)	nadkb (ENSOKIG00005034592)	SHISAL2A (ENSOKIG00005034564)	slc1a7a (ENSOKIG00005034383)	scp2a (ENSOKIG00005034206)	czib (ENSOKIG00005034153)	uck2b (ENSOKIG00005034095)	ENSOKIG00005034085
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.d.b.b.b.a.b #22
Huchen	MODERN SPECIES	10898																ENSHHUG00000018897 #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155404.i.a.d.b.b.b.b #22
Huchen	MODERN SPECIES	3099																ENSHHUG00000027915 #22	arhgef18a (ENSHHUG00000027921) #21	sppl2 (ENSHHUG00000027944)	lsm7 (ENSHHUG00000027996)	DAPK3 (ENSHHUG00000028005)	ENSHHUG00000028037	prkci (ENSHHUG00000028040)
Acanthomorphata	ANCESTRAL SPECIES		ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Euacanthomorphacea	ANCESTRAL SPECIES	4	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157178.g	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b
Percomorphaceae	ANCESTRAL SPECIES	6	ENSGT00940000164495.c.b	ENSGT00940000155438.b	ENSGT00390000012078.a.a	ENSGT00950000182915.b.b.a.b.c.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b
Percomorphaceae_B	ANCESTRAL SPECIES	8	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875
Percomorphaceae_C	ANCESTRAL SPECIES	6	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875
Percomorphaceae_D	ANCESTRAL SPECIES	6	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Anabantaria	ANCESTRAL SPECIES	8	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a
Anabantoidei	ANCESTRAL SPECIES	18	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a
Climbing perch	MODERN SPECIES	8	rab8a (ENSATEG00000021347)	tpm4b (ENSATEG00000021359)	ap1m1 (ENSATEG00000021388)	klf2b (ENSATEG00000021417)	ENSATEG00000021431	ENSATEG00000021467	ENSATEG00000021516	rx2 (ENSATEG00000021571)	cplx4c (ENSATEG00000021592)	ENSATEG00000021624	ENSATEG00000021806	nmrk2 (ENSATEG00000021836)	loxl5b (ENSATEG00000021850)	ENSATEG00000030020	mfsd14a2 (ENSATEG00000021872)	insra (ENSATEG00000021893) #22	arhgef18a (ENSATEG00000021947) #21	sppl2 (ENSATEG00000021965)	ENSATEG00000021989	ENSATEG00000022009	ENSATEG00000022030	prkci (ENSATEG00000022084)	ENSATEG00000022095	gpr160 (ENSATEG00000022102)	nadkb (ENSATEG00000022113)	sec62 (ENSATEG00000022140)	samd7 (ENSATEG00000022156)	ENSATEG00000022173	apoda.1 (ENSATEG00000022197)	ENSATEG00000027090	and2 (ENSATEG00000022211)
Siamese fighting fish	MODERN SPECIES	8	admp (ENSBSLG00000025477)	CIB3 (ENSBSLG00000025480)	rab8a (ENSBSLG00000025494)	tpm4b (ENSBSLG00000025568)	ap1m1 (ENSBSLG00000025820)	ENSBSLG00000025946	ENSBSLG00000026013	ENSBSLG00000026085	rx2 (ENSBSLG00000026109)	cplx4c (ENSBSLG00000026113)	ATCAY (ENSBSLG00000026123)	nmrk2 (ENSBSLG00000026127)	loxl5b (ENSBSLG00000026129)	ENSBSLG00000026138	mfsd14a2 (ENSBSLG00000026162)	insra (ENSBSLG00000026284) #22	arhgef18a (ENSBSLG00000026444) #21	ENSBSLG00000026445	ENSBSLG00000026446	ENSBSLG00000026448	sppl2 (ENSBSLG00000026467)	ENSBSLG00000026491	ENSBSLG00000026497	prkci (ENSBSLG00000026515)	ENSBSLG00000026532	gpr160 (ENSBSLG00000026533)	nadkb (ENSBSLG00000026536)	sec62 (ENSBSLG00000026544)	samd7 (ENSBSLG00000026545)	apoda.2 (ENSBSLG00000026546)	apoda.1 (ENSBSLG00000026547)
Zig-zag eel	MODERN SPECIES	8	rab8a (ENSMAMG00000004673)	ENSMAMG00000004619	ap1m1 (ENSMAMG00000004566)	klf2b (ENSMAMG00000004549)	ENSMAMG00000004501	ENSMAMG00000004470	rx2 (ENSMAMG00000004421)	cplx4c (ENSMAMG00000004404)	ENSMAMG00000027625	ENSMAMG00000024656	ENSMAMG00000002438	nmrk2 (ENSMAMG00000027862)	loxl5b (ENSMAMG00000027833)	ENSMAMG00000025484	mfsd14a2 (ENSMAMG00000002348)	insra (ENSMAMG00000002263) #22	arhgef18a (ENSMAMG00000002226) #21	sppl2 (ENSMAMG00000002200)	ENSMAMG00000002171	ENSMAMG00000024860	ENSMAMG00000002129	prkci (ENSMAMG00000002047)	ENSMAMG00000001977	nadkb (ENSMAMG00000001911)	sec62 (ENSMAMG00000001870)	samd7 (ENSMAMG00000001830)	apoda.1 (ENSMAMG00000026576)	ENSMAMG00000026220	and2 (ENSMAMG00000001749)	ENSMAMG00000026043	ENSMAMG00000001723
Carangaria	ANCESTRAL SPECIES	5	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Carangaria_A	ANCESTRAL SPECIES	2	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000179442	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Seriola	ANCESTRAL SPECIES		ENSGT00410000025556.a.b	ENSGT00940000170852	ENSGT00940000159402	ENSGT00730000111147	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Greater amberjack	MODERN SPECIES	99	CIB3 (ENSSDUG00000010171)	rab8a (ENSSDUG00000010203)	TPM4 (ENSSDUG00000010212)	ap1m1 (ENSSDUG00000010253)	klf2b (ENSSDUG00000010309)	ENSSDUG00000010331	ENSSDUG00000010450	DNAH8 (ENSSDUG00000010493)	rx2 (ENSSDUG00000010646)	ENSSDUG00000010767	ATCAY (ENSSDUG00000011755)	nmrk2 (ENSSDUG00000011777)	loxl5b (ENSSDUG00000011790)	ENSSDUG00000011828	mfsd14a2 (ENSSDUG00000011938)	insra (ENSSDUG00000011994) #22	arhgef18a (ENSSDUG00000012076) #21	sppl2 (ENSSDUG00000012109)	DAPK3 (ENSSDUG00000012176)	ENSSDUG00000012194	prkci (ENSSDUG00000012217)	ENSSDUG00000012283	gpr160 (ENSSDUG00000012302)	nadkb (ENSSDUG00000012315)	sec62 (ENSSDUG00000012339)	samd7 (ENSSDUG00000012374)	apoda.2 (ENSSDUG00000012402)	apoda.2 (ENSSDUG00000012410)	apoda.1 (ENSSDUG00000012430)	COPS9 (ENSSDUG00000012437)	and2 (ENSSDUG00000012457)
Yellowtail amberjack	MODERN SPECIES	3098	CIB3 (ENSSLDG00000009713)	rab8a (ENSSLDG00000009731)	TPM4 (ENSSLDG00000009760)	ap1m1 (ENSSLDG00000009850)	klf2b (ENSSLDG00000009910)	ENSSLDG00000009931	ENSSLDG00000010003	DNAH8 (ENSSLDG00000010077)	rx2 (ENSSLDG00000010289)	ENSSLDG00000010314	ATCAY (ENSSLDG00000010332)	nmrk2 (ENSSLDG00000010406)	loxl5b (ENSSLDG00000010821)	ENSSLDG00000010862	mfsd14a2 (ENSSLDG00000010966)	insra (ENSSLDG00000011008) #22	arhgef18a (ENSSLDG00000011115) #21	sppl2 (ENSSLDG00000011200)	DAPK3 (ENSSLDG00000011269)	ENSSLDG00000011284	ENSSLDG00000011304	prkci (ENSSLDG00000011321)	SKIL (ENSSLDG00000011355)	gpr160 (ENSSLDG00000011372)	nadkb (ENSSLDG00000011398)	sec62 (ENSSLDG00000011448)	samd7 (ENSSLDG00000011473)	ENSSLDG00000011491	apoda.2 (ENSSLDG00000011505)	ENSSLDG00000011517	ENSSLDG00000011534
Barramundi perch	MODERN SPECIES	74	rab8a (ENSLCAG00010017119)	TPM4 (ENSLCAG00010017093)	ap1m1 (ENSLCAG00010017067)	klf2b (ENSLCAG00010017056)	ENSLCAG00010017034	ENSLCAG00010017004	DNAH8 (ENSLCAG00010016949)	rx2 (ENSLCAG00010016937)	ENSLCAG00010016936	ENSLCAG00010016452	ATCAY (ENSLCAG00010016334)	nmrk2 (ENSLCAG00010016330)	loxl5b (ENSLCAG00010016325)	ENSLCAG00010016322	mfsd14a2 (ENSLCAG00010016277)	insra (ENSLCAG00010016069) #22	arhgef18a (ENSLCAG00010016005) #21	sppl2 (ENSLCAG00010015853)	ENSLCAG00010015805	ENSLCAG00010015798	prkci (ENSLCAG00010015724)	ENSLCAG00010015709	gpr160 (ENSLCAG00010015708)	nadkb (ENSLCAG00010015705)	sec62 (ENSLCAG00010015701)	samd7 (ENSLCAG00010015697)	apoda.2 (ENSLCAG00010015694)	apoda.2 (ENSLCAG00010015692)	apoda.1 (ENSLCAG00010015690)	COPS9 (ENSLCAG00010015689)	and2 (ENSLCAG00010015687)
Pleuronectoidei	ANCESTRAL SPECIES	1	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a
Tongue sole	MODERN SPECIES	12	CIB3 (ENSCSEG00000015836)	ENSCSEG00000015760	rab8a (ENSCSEG00000015716)	TPM4 (ENSCSEG00000015696)	ap1m1 (ENSCSEG00000015635)	klf2b (ENSCSEG00000015625)	ENSCSEG00000015603	ENSCSEG00000015580	rx2 (ENSCSEG00000015566)	ENSCSEG00000015562	ATCAY (ENSCSEG00000015532)	nmrk2 (ENSCSEG00000015523)	loxl5b (ENSCSEG00000015516)	ENSCSEG00000014556	mfsd14a2 (ENSCSEG00000014520)	insra (ENSCSEG00000014505) #22	arhgef18a (ENSCSEG00000014485) #21	sppl2 (ENSCSEG00000014469)	ENSCSEG00000014457	ENSCSEG00000014443	prkci (ENSCSEG00000014385)	ENSCSEG00000014368	nadkb (ENSCSEG00000014348)	sec62 (ENSCSEG00000014338)	samd7 (ENSCSEG00000014323)	apoda.2 (ENSCSEG00000014291)	apoda.1 (ENSCSEG00000014274)	and2 (ENSCSEG00000014260)	ENSCSEG00000014237	ENSCSEG00000014212	e2f5 (ENSCSEG00000014202)
Turbot	MODERN SPECIES	19	CIB3 (ENSSMAG00000014773)	rab8a (ENSSMAG00000032645)	TPM4 (ENSSMAG00000014803)	ap1m1 (ENSSMAG00000014843)	ENSSMAG00000014887	ENSSMAG00000014898	ENSSMAG00000014926	rx2 (ENSSMAG00000014946)	cplx4c (ENSSMAG00000014957)	ENSSMAG00000014972	ENSSMAG00000015350	nmrk2 (ENSSMAG00000015396)	loxl5b (ENSSMAG00000015408)	ENSSMAG00000015444	mfsd14a2 (ENSSMAG00000015465)	insra (ENSSMAG00000015526) #22	arhgef18a (ENSSMAG00000015562) #21	sppl2 (ENSSMAG00000015610)	ENSSMAG00000015643	ENSSMAG00000008247	ENSSMAG00000015673	prkci (ENSSMAG00000015695)	ENSSMAG00000032626	gpr160 (ENSSMAG00000015738)	nadkb (ENSSMAG00000015749)	sec62 (ENSSMAG00000015782)	samd7 (ENSSMAG00000015788)	ENSSMAG00000015800	apoda.2 (ENSSMAG00000015827)	apoda.1 (ENSSMAG00000015837)	ENSSMAG00000025536
Eupercaria	ANCESTRAL SPECIES	24	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Tetraodontidae	ANCESTRAL SPECIES	37	ENSGT00390000005847	ENSGT00940000165063	ENSGT00940000155464.b	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000169355.b	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Tetraodon	MODERN SPECIES	7	ENSTNIG00000014890	pnhd (ENSTNIG00000014891)	admp (ENSTNIG00000014892)	ENSTNIG00000014893	CIB3 (ENSTNIG00000014894)	rab8a (ENSTNIG00000014895)	ENSTNIG00000014896	ENSTNIG00000014897	ENSTNIG00000014898	ENSTNIG00000014899	ENSTNIG00000014900	rx2 (ENSTNIG00000014901)	loxl5b (ENSTNIG00000014902)	ENSTNIG00000014903	mfsd14a2 (ENSTNIG00000014904)	insra (ENSTNIG00000014905) #22	arhgef18a (ENSTNIG00000014906) #21	sppl2 (ENSTNIG00000014908)	sppl2 (ENSTNIG00000014907)	DAPK3 (ENSTNIG00000014909)	ENSTNIG00000014910	prkci (ENSTNIG00000014911)	ENSTNIG00000014912	nadkb (ENSTNIG00000011372)	sec62 (ENSTNIG00000008860)	samd7 (ENSTNIG00000008861)	apoda.2 (ENSTNIG00000005595)	ENSTNIG00000005594	ENSTNIG00000002196	e2f5 (ENSTNIG00000002195)	ENSTNIG00000002194
Fugu	MODERN SPECIES	14	admp (ENSTRUG00000011210)	ENSTRUG00000031561	CIB3 (ENSTRUG00000010744)	rab8a (ENSTRUG00000025256)	TPM4 (ENSTRUG00000010332)	ap1m1 (ENSTRUG00000010097)	ENSTRUG00000023012	ENSTRUG00000009788	ENSTRUG00000009578	rx2 (ENSTRUG00000009519)	ATCAY (ENSTRUG00000009394)	nmrk2 (ENSTRUG00000009269)	loxl5b (ENSTRUG00000009159)	ENSTRUG00000030471	mfsd14a2 (ENSTRUG00000008341)	insra (ENSTRUG00000007600) #22	ENSTRUG00000007483	arhgef18a (ENSTRUG00000007257) #21	sppl2 (ENSTRUG00000006665)	DAPK3 (ENSTRUG00000006459)	ENSTRUG00000006246	prkci (ENSTRUG00000005596)	ENSTRUG00000005233	gpr160 (ENSTRUG00000021880)	nadkb (ENSTRUG00000004767)	sec62 (ENSTRUG00000004502)	samd7 (ENSTRUG00000004470)	apoda.2 (ENSTRUG00000004313)	apoda.2 (ENSTRUG00000004180)	apoda.1 (ENSTRUG00000004136)	ENSTRUG00000033416
Eupecaria_A	ANCESTRAL SPECIES	8	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Eupecaria_B	ANCESTRAL SPECIES	8	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Eupecaria_C	ANCESTRAL SPECIES	10	ENSGT00530000063553.b.a	ENSGT00500000044869.a.b	ENSGT00940000165304	ENSGT00730000111147	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	8	ENSGT00530000063553.b.a	ENSGT00500000044869.a.b	ENSGT00940000165304	ENSGT00730000111147	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00390000000076	ENSGT00500000045505.a
European seabass	MODERN SPECIES		admp (ENSDLAG00005011421)	CIB3 (ENSDLAG00005032165)	rab8a (ENSDLAG00005031001)	TPM4 (ENSDLAG00005028686)	ap1m1 (ENSDLAG00005009875)	ENSDLAG00005034343	ENSDLAG00005007762	ENSDLAG00005006021	rx2 (ENSDLAG00005005932)	ENSDLAG00005005910	ENSDLAG00005005799	nmrk2 (ENSDLAG00005005781)	loxl5b (ENSDLAG00005005761)	ENSDLAG00005005742	mfsd14a2 (ENSDLAG00005005155)	insra (ENSDLAG00005002895) #22	arhgef18a (ENSDLAG00005002469) #21	sppl2 (ENSDLAG00005024680)	ENSDLAG00005024667	ENSDLAG00005024614	prkci (ENSDLAG00005024200)	gpr160 (ENSDLAG00005024151)	nadkb (ENSDLAG00005023992)	sec62 (ENSDLAG00005023976)	samd7 (ENSDLAG00005023972)	ENSDLAG00005023970	apoda.2 (ENSDLAG00005023966)	apoda.1 (ENSDLAG00005023964)	ENSDLAG00005023962	and2 (ENSDLAG00005023958)	ENSDLAG00005023942
Large yellow croaker	MODERN SPECIES	1	txndc12 (ENSLCRG00005022384)	gipc2 (ENSLCRG00005022387)	dnajb4 (ENSLCRG00005022389)	slc25a24l (ENSLCRG00005022391)	fubp1 (ENSLCRG00005022394)	miga1 (ENSLCRG00005022414)	usp33 (ENSLCRG00005022587)	zzz3 (ENSLCRG00005022748)	ak5 (ENSLCRG00005022750)	pigk (ENSLCRG00005022751)	ST6GALNAC5 (ENSLCRG00005022777)	st6galnac3 (ENSLCRG00005022779)	rabggtb (ENSLCRG00005022782)	acadm (ENSLCRG00005022785)	mfsd14a2 (ENSLCRG00005022816)	insra (ENSLCRG00005022862) #22	arhgef18a (ENSLCRG00005023556) #21	sppl2 (ENSLCRG00005023570)	ENSLCRG00005023631	ENSLCRG00005023633	prkci (ENSLCRG00005023644)	ENSLCRG00005023677	ENSLCRG00005023678	nadkb (ENSLCRG00005023680)	sec62 (ENSLCRG00005023681)	samd7 (ENSLCRG00005023682)	apoda.2 (ENSLCRG00005023683)	apoda.2 (ENSLCRG00005023684)	apoda.1 (ENSLCRG00005023685)	COPS9 (ENSLCRG00005023687)	and2 (ENSLCRG00005023688)
Gilthead seabream	MODERN SPECIES	13	ENSSAUG00010026844	CIB3 (ENSSAUG00010026848)	rab8a (ENSSAUG00010026850)	ap1m1 (ENSSAUG00010026856)	ENSSAUG00010026858	ENSSAUG00010026860	ENSSAUG00010026872	DNAH8 (ENSSAUG00010026887)	rx2 (ENSSAUG00010026895)	ENSSAUG00010026896	ATCAY (ENSSAUG00010026897)	nmrk2 (ENSSAUG00010026899)	loxl5b (ENSSAUG00010026900)	ENSSAUG00010026901	mfsd14a2 (ENSSAUG00010026916)	insra (ENSSAUG00010026998) #22	arhgef18a (ENSSAUG00010027134) #21	sppl2 (ENSSAUG00010027141)	prkci (ENSSAUG00010027206)	ENSSAUG00010027331	ENSSAUG00010027332	gpr160 (ENSSAUG00010027333)	nadkb (ENSSAUG00010027339)	sec62 (ENSSAUG00010027353)	samd7 (ENSSAUG00010027354)	apoda.2 (ENSSAUG00010027355)	apoda.2 (ENSSAUG00010027356)	apoda.1 (ENSSAUG00010027357)	COPS9 (ENSSAUG00010027358)	and2 (ENSSAUG00010002785)	ENSSAUG00010002805
Perciformes	ANCESTRAL SPECIES	5	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Perciformes_a	ANCESTRAL SPECIES	17	ENSGT00940000165287.a.a	ENSGT00390000005847	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a
Pike perch	MODERN SPECIES	12	admp (ENSSLUG00000021741)	CIB3 (ENSSLUG00000021748)	rab8a (ENSSLUG00000021756)	TPM4 (ENSSLUG00000021784)	ap1m1 (ENSSLUG00000021921)	klf2b (ENSSLUG00000021931)	ENSSLUG00000022021	rx2 (ENSSLUG00000022991)	ENSSLUG00000023026	ATCAY (ENSSLUG00000023110)	ENSSLUG00000023122	nmrk2 (ENSSLUG00000023127)	loxl5b (ENSSLUG00000023134)	ENSSLUG00000023194	mfsd14a2 (ENSSLUG00000023580)	insra (ENSSLUG00000023795) #22	arhgef18a (ENSSLUG00000024303) #21	sppl2 (ENSSLUG00000024353)	ENSSLUG00000024543	ENSSLUG00000024565	prkci (ENSSLUG00000024678)	ENSSLUG00000024851	nadkb (ENSSLUG00000024865)	sec62 (ENSSLUG00000024894)	samd7 (ENSSLUG00000024898)	apoda.2 (ENSSLUG00000024903)	apoda.2 (ENSSLUG00000024906)	apoda.1 (ENSSLUG00000024912)	COPS9 (ENSSLUG00000024915)	and2 (ENSSLUG00000024919)	ENSSLUG00000024923
Channel bull blenny	MODERN SPECIES	8	admp (ENSCGOG00000023485)	CIB3 (ENSCGOG00000023488)	rab8a (ENSCGOG00000023494)	TPM4 (ENSCGOG00000023639)	ap1m1 (ENSCGOG00000024195)	klf2b (ENSCGOG00000024277)	ENSCGOG00000024301	calr3a (ENSCGOG00000024377)	ENSCGOG00000024380	rx2 (ENSCGOG00000024381)	ATCAY (ENSCGOG00000024382)	nmrk2 (ENSCGOG00000024385)	loxl5b (ENSCGOG00000024389)	ENSCGOG00000024404	mfsd14a2 (ENSCGOG00000024457)	insra (ENSCGOG00000024530) #22	arhgef18a (ENSCGOG00000024562) #21	sppl2 (ENSCGOG00000024570)	DAPK3 (ENSCGOG00000001711)	ENSCGOG00000001733	prkci (ENSCGOG00000001799)	SKIL (ENSCGOG00000002890)	gpr160 (ENSCGOG00000002895)	nadkb (ENSCGOG00000002912)	sec62 (ENSCGOG00000003241)	samd7 (ENSCGOG00000003290)	apoda.2 (ENSCGOG00000003295)	apoda.2 (ENSCGOG00000003314)	apoda.1 (ENSCGOG00000003317)	COPS9 (ENSCGOG00000003320)	and2 (ENSCGOG00000003322)
Cottioidei	ANCESTRAL SPECIES	22	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00390000015520	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00980000198875	ENSGT00500000045505.a
Lumpfish	MODERN SPECIES	8	CIB3 (ENSCLMG00005020693)	rab8a (ENSCLMG00005020691)	TPM4 (ENSCLMG00005020486)	ap1m1 (ENSCLMG00005020480)	ENSCLMG00005020479	ENSCLMG00005019530	ENSCLMG00005019524	ENSCLMG00005019523	rx2 (ENSCLMG00005019518)	ENSCLMG00005019496	ATCAY (ENSCLMG00005019493)	nmrk2 (ENSCLMG00005019484)	loxl5b (ENSCLMG00005019478)	ENSCLMG00005019375	mfsd14a2 (ENSCLMG00005018750)	insra (ENSCLMG00005010724) #22	sppl2 (ENSCLMG00005009564)	arhgef18a (ENSCLMG00005009552) #21	ENSCLMG00005009500	ENSCLMG00005009498	prkci (ENSCLMG00005006034)	ENSCLMG00005006000	ENSCLMG00005005998	nadkb (ENSCLMG00005004665)	sec62 (ENSCLMG00005004512)	samd7 (ENSCLMG00005004484)	ENSCLMG00005004465	apoda.2 (ENSCLMG00005004450)	apoda.1 (ENSCLMG00005004440)	ENSCLMG00005004432	and2 (ENSCLMG00005004411)
Stickleback	MODERN SPECIES	2	pnhd (ENSGACG00000016840)	admp (ENSGACG00000016841)	CIB3 (ENSGACG00000016844)	rab8a (ENSGACG00000016850)	TPM4 (ENSGACG00000016865)	ap1m1 (ENSGACG00000016883)	klf2b (ENSGACG00000016890)	ENSGACG00000016893	ENSGACG00000016898	rx2 (ENSGACG00000016904)	ATCAY (ENSGACG00000016905)	loxl5b (ENSGACG00000016914)	ENSGACG00000016917	ENSGACG00000016918	mfsd14a2 (ENSGACG00000016925)	insra (ENSGACG00000016929) #22	arhgef18a (ENSGACG00000016935) #21	sppl2 (ENSGACG00000016939)	DAPK3 (ENSGACG00000016942)	ENSGACG00000016948	prkci (ENSGACG00000016956)	ENSGACG00000016970	gpr160 (ENSGACG00000016975)	nadkb (ENSGACG00000016976)	sec62 (ENSGACG00000016985)	samd7 (ENSGACG00000016988)	apoda.2 (ENSGACG00000016991)	apoda.2 (ENSGACG00000016996)	apoda.2 (ENSGACG00000016998)	apoda.1 (ENSGACG00000017003)	ENSGACG00000017008
Ballan wrasse	MODERN SPECIES	604																insra (ENSLBEG00000006683) #22	ENSLBEG00000006583	ENSLBEG00000006351	ENSLBEG00000006258	hnrnpc (ENSLBEG00000006193)	ENSLBEG00000006062	apol1 (ENSLBEG00000005991)
Ovalentaria	ANCESTRAL SPECIES	5	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000178969	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Atherinomorphae	ANCESTRAL SPECIES	4	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000178969	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a	ENSGT00940000164239.b.a
Cyprinodontiformes	ANCESTRAL SPECIES	5	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000178969	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a	ENSGT00940000164239.b.a
Aplocheiloidei	ANCESTRAL SPECIES	11	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000178969	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414	ENSGT00940000156252.qb
Mangrove rivulus	MODERN SPECIES	17	rab8a (ENSKMAG00000021422)	TPM4 (ENSKMAG00000021445)	ap1m1 (ENSKMAG00000021466)	klf2b (ENSKMAG00000021486)	ENSKMAG00000021510	rx2 (ENSKMAG00000021563)	cplx4c (ENSKMAG00000021571)	ENSKMAG00000021624	ATCAY (ENSKMAG00000021719)	ENSKMAG00000021762	ENSKMAG00000021886	nmrk2 (ENSKMAG00000021956)	loxl5b (ENSKMAG00000021961)	ENSKMAG00000021966	mfsd14a2 (ENSKMAG00000021986)	insra (ENSKMAG00000021993) #22	arhgef18a (ENSKMAG00000022000) #21	sppl2 (ENSKMAG00000022014)	DAPK3 (ENSKMAG00000022041)	prkci (ENSKMAG00000022052)	ENSKMAG00000022070	ENSKMAG00000022074	nadkb (ENSKMAG00000022077)	sec62 (ENSKMAG00000022081)	samd7 (ENSKMAG00000022084)	apoda.1 (ENSKMAG00000022086)	and2 (ENSKMAG00000022089)	ENSKMAG00000022093	ENSKMAG00000000142	ENSKMAG00000000293	e2f5 (ENSKMAG00000000314)
Turquoise killifish	MODERN SPECIES	1618	ENSNFUG00015005127	ENSNFUG00015005017	rx2 (ENSNFUG00015005000)	cplx4c (ENSNFUG00015004995)	ENSNFUG00015004989	ENSNFUG00015004784	ATCAYB (ENSNFUG00015004751)	nmrk2 (ENSNFUG00015004742)	loxl5b (ENSNFUG00015004712)	ENSNFUG00015024992	HSD17B12B (ENSNFUG00015024988)	ttc17 (ENSNFUG00015024960)	ENSNFUG00015024948	TRAF6 (ENSNFUG00015024945)	trpm5 (ENSNFUG00015024937)	insra (ENSNFUG00015024774) #22	ARHGEF18A (ENSNFUG00015024732) #21	sppl2 (ENSNFUG00015024709)	ENSNFUG00015024696	CIB3 (ENSNFUG00015024692)	admp (ENSNFUG00015024691)	pnhd (ENSNFUG00015024690)	ENSNFUG00015024665	ENSNFUG00015024663	RANBP3 (ENSNFUG00015024656)	ENSNFUG00015024655	ENSNFUG00015024653	ptprfb (ENSNFUG00015020795)	ENSNFUG00015020630	ENSNFUG00015020629	ENSNFUG00015020627
Cyprinodontoidei	ANCESTRAL SPECIES	2	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000155464.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.a.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Poeciliinae	ANCESTRAL SPECIES	6	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000155464.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.a.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Poecilia	ANCESTRAL SPECIES	16	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000177949	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000155464.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.a.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414	ENSGT00940000157353
NAME_6	ANCESTRAL SPECIES	11	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000155464.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.a.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00690000103893	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414	ENSGT00940000157353
Amazon molly	MODERN SPECIES	401	rab8a (ENSPFOG00000001392)	tpm4b (ENSPFOG00000001525)	ap1m1 (ENSPFOG00000001693)	klf2b (ENSPFOG00000001804)	ENSPFOG00000001932	ENSPFOG00000002251	ENSPFOG00000002333	cplx4c (ENSPFOG00000002659)	rx2 (ENSPFOG00000002677)	ATCAY (ENSPFOG00000023322)	nmrk2 (ENSPFOG00000022405)	loxl5b (ENSPFOG00000002741)	ENSPFOG00000020950	ENSPFOG00000002967	mfsd14a2 (ENSPFOG00000003232)	insra (ENSPFOG00000003462) #22	arhgef18a (ENSPFOG00000004448) #21	sppl2 (ENSPFOG00000004652)	ENSPFOG00000004990	prkci (ENSPFOG00000005126)	ENSPFOG00000005377	nadkb (ENSPFOG00000005440)	sec62 (ENSPFOG00000005670)	samd7 (ENSPFOG00000005810)	apoda.2 (ENSPFOG00000005900)	apoda.2 (ENSPFOG00000005938)	apoda.1 (ENSPFOG00000006029)	apoda.2 (ENSPFOG00000006091)	and2 (ENSPFOG00000006096)	ENSPFOG00000006120	ENSPFOG00000006195
Sailfin molly	MODERN SPECIES	1159															mfsd14a2 (ENSPLAG00000015853)	insra (ENSPLAG00000000359) #22	arhgef18a (ENSPLAG00000015793) #21	sppl2 (ENSPLAG00000015779)	ENSPLAG00000015727
Guppy	MODERN SPECIES	447	rab8a (ENSPREG00000012101)	tpm4b (ENSPREG00000012127)	ENSPREG00000012162	ap1m1 (ENSPREG00000012177)	klf2b (ENSPREG00000012250)	ENSPREG00000012272	ENSPREG00000012309	ENSPREG00000012428	cplx4c (ENSPREG00000013180)	rx2 (ENSPREG00000013196)	ATCAY (ENSPREG00000013212)	nmrk2 (ENSPREG00000013253)	ENSPREG00000013268	ENSPREG00000013319	mfsd14a2 (ENSPREG00000013489)	insra (ENSPREG00000013525) #22	arhgef18a (ENSPREG00000013555) #21	sppl2 (ENSPREG00000013571)	ENSPREG00000013588	prkci (ENSPREG00000013611)	SKIL (ENSPREG00000013657)	nadkb (ENSPREG00000013672)	sec62 (ENSPREG00000013701)	samd7 (ENSPREG00000013733)	apoda.2 (ENSPREG00000013773)	apoda.2 (ENSPREG00000013769)	apoda.1 (ENSPREG00000013787)	and2 (ENSPREG00000013791)	ENSPREG00000013805	ENSPREG00000013818	ENSPREG00000013828
Platyfish	MODERN SPECIES	20	rab8a (ENSXMAG00000029254)	TPM4 (ENSXMAG00000000647)	ap1m1 (ENSXMAG00000000642)	klf2b (ENSXMAG00000000640)	ENSXMAG00000000632	ENSXMAG00000026007	ENSXMAG00000026318	cplx4c (ENSXMAG00000020858)	rx2 (ENSXMAG00000021214)	ATCAY (ENSXMAG00000000615)	nmrk2 (ENSXMAG00000000613)	loxl5b (ENSXMAG00000000605)	ENSXMAG00000022805	ENSXMAG00000000591	mfsd14a2 (ENSXMAG00000000578)	insra (ENSXMAG00000000547) #22	arhgef18a (ENSXMAG00000000544) #21	sppl2 (ENSXMAG00000000521)	DAPK3 (ENSXMAG00000000503)	prkci (ENSXMAG00000000481)	ENSXMAG00000000477	nadkb (ENSXMAG00000000472)	sec62 (ENSXMAG00000024897)	samd7 (ENSXMAG00000017807)	ENSXMAG00000017804	apoda.2 (ENSXMAG00000017795)	apoda.1 (ENSXMAG00000017786)	and2 (ENSXMAG00000026844)	ENSXMAG00000007614	LRRCC1 (ENSXMAG00000007622)	e2f5 (ENSXMAG00000029649)
NAME_4	ANCESTRAL SPECIES	111	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000155464.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000163917.a.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Mummichog	MODERN SPECIES	2265	rab8a (ENSFHEG00000010167)	TPM4 (ENSFHEG00000010127)	ap1m1 (ENSFHEG00000010097)	klf2b (ENSFHEG00000010037)	ENSFHEG00000010027	ENSFHEG00000009995	ENSFHEG00000009974	ENSFHEG00000009905	cplx4c (ENSFHEG00000000222)	rx2 (ENSFHEG00000009601)	ATCAY (ENSFHEG00000009585)	nmrk2 (ENSFHEG00000009578)	loxl5b (ENSFHEG00000009571)	ENSFHEG00000009535	mfsd14a2 (ENSFHEG00000009389)	insra (ENSFHEG00000009349) #22	arhgef18a (ENSFHEG00000009303) #21	sppl2 (ENSFHEG00000009268)	DAPK3 (ENSFHEG00000009227)	prkci (ENSFHEG00000009176)	SKIL (ENSFHEG00000009097)
Sheepshead minnow	MODERN SPECIES	582		st6galnac3 (ENSCVAG00000017646)	rabggtb (ENSCVAG00000017873)	acadm (ENSCVAG00000017906)	ENSCVAG00000017924	ENSCVAG00000017965	rps8a (ENSCVAG00000017967)	hectd3 (ENSCVAG00000018045)	cplx4c (ENSCVAG00000018063)	ENSCVAG00000000834	ATCAY (ENSCVAG00000018090)	nmrk2 (ENSCVAG00000000475)	loxl5b (ENSCVAG00000018122)	ENSCVAG00000018294	mfsd14a2 (ENSCVAG00000018342)	insra (ENSCVAG00000018467) #22	arhgef18a (ENSCVAG00000018498) #21	sppl2 (ENSCVAG00000018516)	DAPK3 (ENSCVAG00000018536)	prkci (ENSCVAG00000018619)	SKIL (ENSCVAG00000018626)	nadkb (ENSCVAG00000018685)	sec62 (ENSCVAG00000018714)	samd7 (ENSCVAG00000018763)
Oryzias	ANCESTRAL SPECIES	12	ENSGT00390000005847	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414	ENSGT00940000157353
Oryzias_b	ANCESTRAL SPECIES	8	ENSGT00390000005847	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414	ENSGT00940000157353
Indian medaka	MODERN SPECIES	10	CIB3 (ENSOMEG00000012888)	rab8a (ENSOMEG00000012861)	ENSOMEG00000012811	ap1m1 (ENSOMEG00000012780)	ENSOMEG00000012740	klf2b (ENSOMEG00000012631)	ENSOMEG00000012717	ENSOMEG00000012610	rx2 (ENSOMEG00000012577)	cplx4c (ENSOMEG00000012566)	ATCAY (ENSOMEG00000012545)	nmrk2 (ENSOMEG00000012522)	loxl5b (ENSOMEG00000012481)	ENSOMEG00000012401	mfsd14a2 (ENSOMEG00000012384)	insra (ENSOMEG00000012348) #22	arhgef18a (ENSOMEG00000012298) #21	sppl2 (ENSOMEG00000012252)	DAPK3 (ENSOMEG00000012168)	prkci (ENSOMEG00000012129)	ENSOMEG00000000294	nadkb (ENSOMEG00000012017)	sec62 (ENSOMEG00000011984)	samd7 (ENSOMEG00000011965)	apoda.2 (ENSOMEG00000011940)	apoda.2 (ENSOMEG00000011925)	apoda.1 (ENSOMEG00000011911)	and2 (ENSOMEG00000011868)	ENSOMEG00000011821	ENSOMEG00000011778	e2f5 (ENSOMEG00000011726)
Javanese ricefish	MODERN SPECIES	8	ENSOJAG00000009906	ENSOJAG00000009877	pnhd (ENSOJAG00000009852)	admp (ENSOJAG00000023119)	CIB3 (ENSOJAG00000023117)	rab8a (ENSOJAG00000023104)	ENSOJAG00000023051	ap1m1 (ENSOJAG00000022995)	klf2b (ENSOJAG00000022988)	ENSOJAG00000022973	rx2 (ENSOJAG00000022963)	cplx4c (ENSOJAG00000022961)	ATCAY (ENSOJAG00000022959)	nmrk2 (ENSOJAG00000022950)	loxl5b (ENSOJAG00000022926)	insra (ENSOJAG00000022139) #22	arhgef18a (ENSOJAG00000022095) #21	sppl2 (ENSOJAG00000021875)	DAPK3 (ENSOJAG00000021853)	prkci (ENSOJAG00000021119)	ENSOJAG00000021010	nadkb (ENSOJAG00000020908)	sec62 (ENSOJAG00000020881)	samd7 (ENSOJAG00000020874)	ENSOJAG00000020845	apoda.2 (ENSOJAG00000020838)	apoda.1 (ENSOJAG00000020827)	and2 (ENSOJAG00000020816)	ENSOJAG00000020809	e2f5 (ENSOJAG00000020753)	ENSOJAG00000020748
Oryzias_a	ANCESTRAL SPECIES	7	ENSGT00940000165287.a.a	ENSGT00390000005847	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.a	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414	ENSGT00940000157353
Japanese Medaka HdrR	MODERN SPECIES	8	admp (ENSORLG00000018027)	CIB3 (ENSORLG00000018025)	rab8a (ENSORLG00000018023)	TPM4 (ENSORLG00000018019)	ap1m1 (ENSORLG00000018017)	klf2b (ENSORLG00000018015)	ENSORLG00000018011	rx2 (ENSORLG00000018007)	cplx4c (ENSORLG00000018003)	ENSORLG00000018000	nmrk2 (ENSORLG00000017998)	ENSORLG00000018014	loxl5b (ENSORLG00000017995)	ENSORLG00000026342	mfsd14a2 (ENSORLG00000017988)	insra (ENSORLG00000017980) #22	arhgef18a (ENSORLG00000017973) #21	sppl2 (ENSORLG00000017969)	ENSORLG00000017965	prkci (ENSORLG00000017963)	ENSORLG00000023373	nadkb (ENSORLG00000017958)	sec62 (ENSORLG00000017951)	ENSORLG00000022218	samd7 (ENSORLG00000017949)	ENSORLG00000017946	apoda.2 (ENSORLG00000021914)	apoda.1 (ENSORLG00000017938)	and2 (ENSORLG00000017936)	ENSORLG00000017934	ENSORLG00000017927
Chinese medaka	MODERN SPECIES	1146	NRTN (ENSOSIG00000019199)	ranbp3b (ENSOSIG00000019205)	ENSOSIG00000019229	ENSOSIG00000019231	pnhd (ENSOSIG00000019233)	CIB3 (ENSOSIG00000019237)	ENSOSIG00000019246	TPM4 (ENSOSIG00000019286)	klf2b (ENSOSIG00000019756)	ENSOSIG00000019757	rx2 (ENSOSIG00000019759)	cplx4c (ENSOSIG00000019760)	nmrk2 (ENSOSIG00000019762)	loxl5b (ENSOSIG00000019765)	mfsd14a2 (ENSOSIG00000019792)	insra (ENSOSIG00000019905) #22	sppl2 (ENSOSIG00000021169)	ENSOSIG00000021173
Ovalentaria_B	ANCESTRAL SPECIES	6	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000178969	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Cichlidae	ANCESTRAL SPECIES	2	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Pseudocrenilabrinae	ANCESTRAL SPECIES	7	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	4	ENSGT00940000165063	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.c	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Haplochromini	ANCESTRAL SPECIES	2	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.v	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.c	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a
Haplochromini_A	ANCESTRAL SPECIES	3	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.v	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Haplochromini_B	ANCESTRAL SPECIES	35	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000169355	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992	ENSGT00940000163917.a.b	ENSGT00950000182938.b.b.b.b.b.a	ENSGT00940000158364.a.c.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.v	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000153424.a.a.d	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000164239.b.a	ENSGT00940000157414
Zebra mbuna	MODERN SPECIES	1100	gng5 (ENSMZEG00005024531)	ssx2ipa (ENSMZEG00005024529)	MCOLN3 (ENSMZEG00005024526) ##17	ENSMZEG00005024524	CCN1 (ENSMZEG00005024522)	ENSMZEG00005024521	ift22 (ENSMZEG00005024520)	atp5l (ENSMZEG00005024517)	ENSMZEG00005024507	atp6v0b (ENSMZEG00005024504)	ATCAY (ENSMZEG00005024500)	nmrk2 (ENSMZEG00005024497)	loxl5b (ENSMZEG00005024495)	ENSMZEG00005024482	mfsd14a2 (ENSMZEG00005024480)	insra (ENSMZEG00005024476) #22	arhgef18a (ENSMZEG00005024471) #21	sppl2 (ENSMZEG00005024468)	ENSMZEG00005024465	ENSMZEG00005024464	prkci (ENSMZEG00005024461)	ENSMZEG00005024459	nadkb (ENSMZEG00005024457)	sec62 (ENSMZEG00005024455)	samd7 (ENSMZEG00005024454)	apoda.2 (ENSMZEG00005024452)	apoda.2 (ENSMZEG00005024451)	apoda.1 (ENSMZEG00005024450)	and2 (ENSMZEG00005024448)	ENSMZEG00005024447	ENSMZEG00005024444
Eastern happy	MODERN SPECIES	9	CIB3 (ENSACLG00000010536)	rab8a (ENSACLG00000010548)	TPM4 (ENSACLG00000010559)	ap1m1 (ENSACLG00000010617)	ENSACLG00000010674	ENSACLG00000010693	ENSACLG00000010700	DNAH8 (ENSACLG00000010713)	rx2 (ENSACLG00000010943)	cplx4c (ENSACLG00000010955)	ATCAY (ENSACLG00000010970)	nmrk2 (ENSACLG00000011005)	loxl5b (ENSACLG00000011015)	ENSACLG00000011076	mfsd14a2 (ENSACLG00000011223)	insra (ENSACLG00000011245) #22	arhgef18a (ENSACLG00000011286) #21	sppl2 (ENSACLG00000011297)	ENSACLG00000011302	ENSACLG00000011310	prkci (ENSACLG00000011313)	nadkb (ENSACLG00000011335)	sec62 (ENSACLG00000011336)	samd7 (ENSACLG00000011343)	apoda.2 (ENSACLG00000011349)	apoda.2 (ENSACLG00000011353)	apoda.1 (ENSACLG00000011357)	and2 (ENSACLG00000011361)	ENSACLG00000011720	ENSACLG00000011753	e2f5 (ENSACLG00000011786)
P. nyererei	MODERN SPECIES	326	CIB3 (ENSPNYG00000007193)	rab8a (ENSPNYG00000007220)	TPM4 (ENSPNYG00000007259)	ap1m1 (ENSPNYG00000007319)	ENSPNYG00000007351	ENSPNYG00000007382	ENSPNYG00000007476	DNAH8 (ENSPNYG00000007506)	rx2 (ENSPNYG00000007700)	cplx4c (ENSPNYG00000007709)	ATCAY (ENSPNYG00000007738)	nmrk2 (ENSPNYG00000007759)	loxl5b (ENSPNYG00000007772)	ENSPNYG00000007844	mfsd14a2 (ENSPNYG00000007987)	insra (ENSPNYG00000008035) #22	arhgef18a (ENSPNYG00000008118) #21	sppl2 (ENSPNYG00000008155)	ENSPNYG00000008207	ENSPNYG00000008227	prkci (ENSPNYG00000008250)	ENSPNYG00000008313	nadkb (ENSPNYG00000008338)	sec62 (ENSPNYG00000008388)	samd7 (ENSPNYG00000008412)	apoda.2 (ENSPNYG00000008484)	apoda.2 (ENSPNYG00000008656)	apoda.1 (ENSPNYG00000008684)	and2 (ENSPNYG00000008728)	ENSPNYG00000008746	ENSPNYG00000008772
Burton s mouthbrooder	MODERN SPECIES	477	rab8a (ENSHBUG00000012776)	TPM4 (ENSHBUG00000012822)	ap1m1 (ENSHBUG00000012863)	ENSHBUG00000012883	ENSHBUG00000012949	ENSHBUG00000012961	DNAH8 (ENSHBUG00000013210)	rx2 (ENSHBUG00000013240)	cplx4c (ENSHBUG00000013260)	ATCAY (ENSHBUG00000013280)	nmrk2 (ENSHBUG00000013293)	loxl5b (ENSHBUG00000013301)	ENSHBUG00000013329	ENSHBUG00000013344	mfsd14a2 (ENSHBUG00000013380)	insra (ENSHBUG00000013474) #22	arhgef18a (ENSHBUG00000013499) #21	sppl2 (ENSHBUG00000013519)	DAPK3 (ENSHBUG00000013569)	ENSHBUG00000013595	prkci (ENSHBUG00000013643)	ENSHBUG00000013667	nadkb (ENSHBUG00000013725)	sec62 (ENSHBUG00000000412)	samd7 (ENSHBUG00000013830)	apoda.2 (ENSHBUG00000013853)	apoda.2 (ENSHBUG00000013951)	apoda.1 (ENSHBUG00000013961)	ENSHBUG00000013976	and2 (ENSHBUG00000013983)
Lyretail cichlid	MODERN SPECIES	313	pnhd (ENSNBRG00000012651)	admp (ENSNBRG00000012628)	CIB3 (ENSNBRG00000012599)	rab8a (ENSNBRG00000012588)	ENSNBRG00000012547	ap1m1 (ENSNBRG00000012502)	ENSNBRG00000012440	ENSNBRG00000012411	DNAH8 (ENSNBRG00000012073)	rx2 (ENSNBRG00000011995)	cplx4c (ENSNBRG00000011980)	ATCAY (ENSNBRG00000011928)	nmrk2 (ENSNBRG00000011899)	loxl5b (ENSNBRG00000011870)	mfsd14a2 (ENSNBRG00000011804)	insra (ENSNBRG00000011734) #22	arhgef18a (ENSNBRG00000011680) #21	sppl2 (ENSNBRG00000011637)	ENSNBRG00000011614	ENSNBRG00000011596	prkci (ENSNBRG00000011552)	ENSNBRG00000011529	nadkb (ENSNBRG00000011487)	sec62 (ENSNBRG00000011453)	samd7 (ENSNBRG00000011438)	apoda.2 (ENSNBRG00000011421)	apoda.2 (ENSNBRG00000011310)	apoda.1 (ENSNBRG00000011246)	and2 (ENSNBRG00000011222)	ENSNBRG00000011206	ENSNBRG00000011117
Nile tilapia	MODERN SPECIES	9	CIB3 (ENSONIG00000018576)	rab8a (ENSONIG00000018577)	TPM4 (ENSONIG00000018578)	ap1m1 (ENSONIG00000018580)	ENSONIG00000018581	ENSONIG00000018582	ENSONIG00000018588	DNAH8 (ENSONIG00000018590)	rx2 (ENSONIG00000018592)	cplx4c (ENSONIG00000037812)	ATCAY (ENSONIG00000018595)	nmrk2 (ENSONIG00000018596)	loxl5b (ENSONIG00000018598)	ENSONIG00000018600	mfsd14a (ENSONIG00000037562)	insra (ENSONIG00000018609) #22	arhgef18a (ENSONIG00000018613) #21	sppl2 (ENSONIG00000018616)	dapk3 (ENSONIG00000018617)	ENSONIG00000018619	prkci (ENSONIG00000018621)	ENSONIG00000035617	nadkb (ENSONIG00000018628)	sec62 (ENSONIG00000018630)	samd7 (ENSONIG00000018632)	apoda.2 (ENSONIG00000018633)	apoda.2 (ENSONIG00000028478)	apoda.1 (ENSONIG00000018635)	and2 (ENSONIG00000018636)	ENSONIG00000018638	ENSONIG00000018639
Midas cichlid	MODERN SPECIES	34	rab8a (ENSACIG00000008151)	ENSACIG00000008125	ap1m1 (ENSACIG00000008105)	ENSACIG00000008092	ENSACIG00000008077	ENSACIG00000008056	ENSACIG00000008035	rx2 (ENSACIG00000008025)	cplx4c (ENSACIG00000008021)	ATCAY (ENSACIG00000007994)	nmrk2 (ENSACIG00000007974)	loxl5b (ENSACIG00000007956)	ENSACIG00000007943	ENSACIG00000007873	mfsd14a2 (ENSACIG00000007726)	insra (ENSACIG00000007680) #22	arhgef18a (ENSACIG00000007619) #21	sppl2 (ENSACIG00000007449)	DAPK3 (ENSACIG00000007416)	ENSACIG00000007405	prkci (ENSACIG00000007370)	ENSACIG00000007352	nadkb (ENSACIG00000007327)	sec62 (ENSACIG00000007307)	samd7 (ENSACIG00000007263)	apoda.2 (ENSACIG00000007239)	apoda.2 (ENSACIG00000007214)	apoda.1 (ENSACIG00000007194)	and2 (ENSACIG00000007170)	ENSACIG00000007143	ENSACIG00000007089
Pomacentridae	ANCESTRAL SPECIES	45	ENSGT00940000160466	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000163917.a.b	ENSGT00940000179442	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.x	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000178969	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a
Bicolor damselfish	MODERN SPECIES	295	admp (ENSSPAG00000013820)	CIB3 (ENSSPAG00000013789)	rab8a (ENSSPAG00000013771)	TPM4 (ENSSPAG00000013716)	ap1m1 (ENSSPAG00000013678)	klf2b (ENSSPAG00000013663)	ENSSPAG00000013587	ENSSPAG00000013551	rx2 (ENSSPAG00000013540)	ENSSPAG00000013255	ATCAY (ENSSPAG00000013203)	nmrk2 (ENSSPAG00000013193)	loxl5b (ENSSPAG00000013170)	ENSSPAG00000013065	mfsd14a2 (ENSSPAG00000013017)	insra (ENSSPAG00000012933) #22	arhgef18a (ENSSPAG00000012894) #21	sppl2 (ENSSPAG00000012854)	DAPK3 (ENSSPAG00000012830)	ENSSPAG00000012820	ENSSPAG00000012812	prkci (ENSSPAG00000012715)	ENSSPAG00000012693	ENSSPAG00000012681	nadkb (ENSSPAG00000012631)	sec62 (ENSSPAG00000012607)	samd7 (ENSSPAG00000012572)	apoda.2 (ENSSPAG00000012537)	apoda.2 (ENSSPAG00000012450)	apoda.1 (ENSSPAG00000012403)	ENSSPAG00000012386
Pomacentridae_A	ANCESTRAL SPECIES	61	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992.bb	ENSGT00940000163917.a.b	ENSGT00940000179442	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.x	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a	ENSGT00940000164239.b.a
Amphiprion	ANCESTRAL SPECIES	66	ENSGT00940000157246.a	ENSGT01030000234542.b.b.a.a.a.b.wb.b	ENSGT00940000157924	ENSGT00940000164495.c.a	ENSGT00940000155438.a	ENSGT00950000182915.b.b.a.b.c.b	ENSGT00940000158992.bb	ENSGT00940000163917.a.b	ENSGT00940000179442	ENSGT00940000155464.b	ENSGT00940000158364.a	ENSGT00940000165007.a	ENSGT00940000154779.a.a.c	ENSGT00940000156845.x	ENSGT00940000164530	ENSGT00940000155404.i.a #22	ENSGT00940000157375.d #21	ENSGT00940000158753	ENSGT00940000161753	ENSGT00940000162952.d.b.b	ENSGT00940000162952.c	ENSGT00940000153497.E	ENSGT00940000158435	ENSGT00940000165431	ENSGT00390000002757	ENSGT00940000160075	ENSGT00510000046981.a.a.b	ENSGT00510000046981.a.a.a	ENSGT00510000046981.b.b	ENSGT00500000045505.a	ENSGT00940000156907.p.a.a
Orange clownfish	MODERN SPECIES	1	CIB3 (ENSAPEG00000022653)	rab8a (ENSAPEG00000022630)	TPM4 (ENSAPEG00000022600)	ap1m1 (ENSAPEG00000022565)	klf2b (ENSAPEG00000022551)	ENSAPEG00000022516	ENSAPEG00000022461	rx2 (ENSAPEG00000022400)	ENSAPEG00000022389	ENSAPEG00000022090	ATCAY (ENSAPEG00000022029)	nmrk2 (ENSAPEG00000022020)	loxl5b (ENSAPEG00000021983)	ENSAPEG00000021943	mfsd14a2 (ENSAPEG00000021916)	insra (ENSAPEG00000021882) #22	arhgef18a (ENSAPEG00000021806) #21	sppl2 (ENSAPEG00000021790)	DAPK3 (ENSAPEG00000021762)	ENSAPEG00000021751	ENSAPEG00000021744	prkci (ENSAPEG00000021683)	SKIL (ENSAPEG00000021648)	nadkb (ENSAPEG00000021614)	sec62 (ENSAPEG00000021577)	samd7 (ENSAPEG00000021559)	apoda.2 (ENSAPEG00000021546)	apoda.2 (ENSAPEG00000021538)	apoda.1 (ENSAPEG00000021492)	and2 (ENSAPEG00000021463)	ENSAPEG00000021452
Clown anemonefish	MODERN SPECIES	593							ENSAOCG00000022863	rx2 (ENSAOCG00000022888)	ENSAOCG00000022910	ENSAOCG00000023057	ATCAY (ENSAOCG00000001666)	nmrk2 (ENSAOCG00000023088)	loxl5b (ENSAOCG00000023123)	ENSAOCG00000023212	mfsd14a2 (ENSAOCG00000023274)	insra (ENSAOCG00000023289) #22	arhgef18a (ENSAOCG00000023326) #21	sppl2 (ENSAOCG00000023351)	DAPK3 (ENSAOCG00000023366)	ENSAOCG00000023386	prkci (ENSAOCG00000023437)	SKIL (ENSAOCG00000023460)	nadkb (ENSAOCG00000023490)	sec62 (ENSAOCG00000023518)	samd7 (ENSAOCG00000023548)	apoda.2 (ENSAOCG00000001691)	apoda.2 (ENSAOCG00000023568)	apoda.1 (ENSAOCG00000023574)	and2 (ENSAOCG00000001693)	ENSAOCG00000023599	ENSAOCG00000023609
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	3355																insra (ENSAPOG00000017568) #22
Spiny chromis	MODERN SPECIES	1828															mfsd14a2 (ENSAPOG00000023033)	insra (ENSAPOG00000023001) #22
Tiger tail seahorse	MODERN SPECIES	488	TPM4 (ENSHCOG00000002392)	ap1m1 (ENSHCOG00000002410)	klf2b (ENSHCOG00000002422)	ENSHCOG00000002432	ENSHCOG00000002440	ENSHCOG00000002450	ENSHCOG00000002466	ENSHCOG00000002479	ENSHCOG00000002483	rx2 (ENSHCOG00000002503)	ATCAY (ENSHCOG00000002527)	nmrk2 (ENSHCOG00000002532)	loxl5b (ENSHCOG00000002565)	ENSHCOG00000002576	mfsd14a2 (ENSHCOG00000002592)	insra (ENSHCOG00000002618) #22	arhgef18a (ENSHCOG00000002623) #21	sppl2 (ENSHCOG00000002642)	ENSHCOG00000000788	prkci (ENSHCOG00000002704)	SKIL (ENSHCOG00000002748)	nadkb (ENSHCOG00000002770)	sec62 (ENSHCOG00000002781)	samd7 (ENSHCOG00000002798)	apoda.1 (ENSHCOG00000002829)	and2 (ENSHCOG00000002846)	RALYL (ENSHCOG00000002851)	ENSHCOG00000002857	LRRCC1 (ENSHCOG00000002914)	e2f5 (ENSHCOG00000002929)
Pinecone sodierfish	MODERN SPECIES	8	CIB3 (ENSMMDG00005015320)	rab8a (ENSMMDG00005015319)	TPM4 (ENSMMDG00005015251)	LPL (ENSMMDG00005013663)	ap1m1 (ENSMMDG00005013621)	klf2b (ENSMMDG00005013620)	ENSMMDG00005013619	ENSMMDG00005013614	rx2 (ENSMMDG00005013611)	cplx4c (ENSMMDG00005013610)	ATCAY (ENSMMDG00005013598)	nmrk2 (ENSMMDG00005013589)	loxl5b (ENSMMDG00005013539)	ENSMMDG00005013530	mfsd14a2 (ENSMMDG00005013508)	insra (ENSMMDG00005011859) #22	ENSMMDG00005011837	tyw3 (ENSMMDG00005011835)	ENSMMDG00005011833	xpr1b (ENSMMDG00005011829)	ttpa (ENSMMDG00005011761)	ENSMMDG00005011755	CHD7 (ENSMMDG00005010740)	rab2a (ENSMMDG00005010671)	ca8 (ENSMMDG00005023292)	ENSMMDG00005023290	exoc3 (ENSMMDG00005023286)	mcm6l (ENSMMDG00005023013)	GPR141 (ENSMMDG00005022992)	ENSMMDG00005022990	si:dkey-94e7.2 (ENSMMDG00005022987)
Cod	MODERN SPECIES	21	rab8a (ENSGMOG00000012489)	TPM4 (ENSGMOG00000012492)	ENSGMOG00000012494	ap1m1 (ENSGMOG00000012498)	klf2b (ENSGMOG00000036462)	ENSGMOG00000012502	ENSGMOG00000012507	rx2 (ENSGMOG00000012510)	ENSGMOG00000032331	ENSGMOG00000012512	nmrk2 (ENSGMOG00000012513)	loxl5b (ENSGMOG00000012514)	ENSGMOG00000032554	ENSGMOG00000012516	mfsd14a2 (ENSGMOG00000012521)	insra (ENSGMOG00000012522) #22	arhgef18a (ENSGMOG00000012527) #21	sppl2 (ENSGMOG00000012529)	prkci (ENSGMOG00000012532)	ENSGMOG00000012534	gpr160 (ENSGMOG00000033311)	ENSGMOG00000028808	ENSGMOG00000032579	ENSGMOG00000026751	nadkb (ENSGMOG00000012538)	sec62 (ENSGMOG00000012540)	samd7 (ENSGMOG00000012541)	apoda.2 (ENSGMOG00000012542)	apoda.1 (ENSGMOG00000012546)	and2 (ENSGMOG00000030076)	ENSGMOG00000012553
Clupeocephala	ANCESTRAL SPECIES	4	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00950000183158.B.a.a	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595
Otomorpha	ANCESTRAL SPECIES	31	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00940000158995.a	ENSGT00940000163126.a.b	ENSGT00940000159258.d	ENSGT00980000198641
Otophysi	ANCESTRAL SPECIES	3	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395
Characiphysae	ANCESTRAL SPECIES	28	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000165866	ENSGT00940000160221.c	ENSGT00390000018319.a.b.b.b.b	ENSGT00950000182930.B	ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000156162.C	ENSGT00940000160614
Characiphysae_b	ANCESTRAL SPECIES	25	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000165866	ENSGT00940000160221.c	ENSGT00390000018319.a.b.b.b.b	ENSGT00950000182930.B	ENSGT00950000182899.C.a	ENSGT00940000156941	ENSGT00940000156162.C	ENSGT00940000160614
Characoidei	ANCESTRAL SPECIES	26	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000165866	ENSGT00390000004757	ENSGT00940000156389.a	ENSGT01050000244937.a.b.b	ENSGT00940000153386.A	ENSGT00940000174617	ENSGT00390000013701	ENSGT00950000183189.a.b.a
Red-bellied piranha	MODERN SPECIES	84	rx1 (ENSPNAG00000010919)	MATK (ENSPNAG00000010897)	ZFR2 (ENSPNAG00000010884)	ATCAY (ENSPNAG00000010862)	mibp (ENSPNAG00000010845)	loxl5a (ENSPNAG00000010823)	mydgf (ENSPNAG00000010816)	tnfaip8l1 (ENSPNAG00000010811)	CERS1 (ENSPNAG00000010809)	ENSPNAG00000010777	ncln (ENSPNAG00000010726)	s1pr4 (ENSPNAG00000010665)	ENSPNAG00000010660	MYO9B (ENSPNAG00000005734)	use1 (ENSPNAG00000010471)	insrb (ENSPNAG00000010410) #22	ARHGEF18 (ENSPNAG00000001390) #21	enc3 (ENSPNAG00000001373)	timm13 (ENSPNAG00000010177)	ENSPNAG00000007029	lsm7 (ENSPNAG00000010141)	sass6 (ENSPNAG00000010108)	mfsd14a1 (ENSPNAG00000010025)	ENSPNAG00000009985	ppp1r2 (ENSPNAG00000009967)	acap2b (ENSPNAG00000009928)	psmd1 (ENSPNAG00000009873)	htr2b (ENSPNAG00000009790)	ENSPNAG00000006032
Mexicana tetra	MODERN SPECIES	20	ENSAMXG00000021636	cherp (ENSAMXG00000021637)	rx1 (ENSAMXG00000021639)	MATK (ENSAMXG00000021640)	ENSAMXG00000021641	ATCAY (ENSAMXG00000039401)	mibp (ENSAMXG00000021643)	loxl5a (ENSAMXG00000021644)	mydgf (ENSAMXG00000033685)	tnfaip8l1 (ENSAMXG00000021647)	CERS1 (ENSAMXG00000021648)	ncln (ENSAMXG00000021649)	s1pr4 (ENSAMXG00000025275)	MYO9B (ENSAMXG00000016576)	use1 (ENSAMXG00000037216)	insrb (ENSAMXG00000016228) #22	ARHGEF18 (ENSAMXG00000015886) #21	enc3 (ENSAMXG00000024846)	rsph3 (ENSAMXG00000037608)	timm13 (ENSAMXG00000040577)	ENSAMXG00000015716	lsm7 (ENSAMXG00000037622)	sass6 (ENSAMXG00000015631)	mfsd14a1 (ENSAMXG00000015606)	ENSAMXG00000015560	ppp1r2 (ENSAMXG00000033495)	acap2b (ENSAMXG00000001330)	htr2b (ENSAMXG00000001352)	psmd1 (ENSAMXG00000001344)	ENSAMXG00000040290	ttc14 (ENSAMXG00000001353)
Electric eel	MODERN SPECIES	157	ENSEEEG00000010149	MATK (ENSEEEG00000010161)	ZFR2 (ENSEEEG00000010349)	ENSEEEG00000010353	ATCAY (ENSEEEG00000010356)	mibp (ENSEEEG00000010357)	ENSEEEG00000010359	ENSEEEG00000010361	mydgf (ENSEEEG00000010363)	tnfaip8l1 (ENSEEEG00000010364)	CERS1 (ENSEEEG00000010366)	ncln (ENSEEEG00000010373)	s1pr4 (ENSEEEG00000010385)	MYO9B (ENSEEEG00000010430)	use1 (ENSEEEG00000011343)	insrb (ENSEEEG00000011399) #22	ENSEEEG00000011765 #21	enc3 (ENSEEEG00000011772)	timm13 (ENSEEEG00000011773)	ENSEEEG00000011775	lsm7 (ENSEEEG00000011778)	sass6 (ENSEEEG00000011815)	mfsd14a1 (ENSEEEG00000011933)	ENSEEEG00000011946	MAP1S (ENSEEEG00000011948)	ENSEEEG00000011953	kng1 (ENSEEEG00000011957)	ENSEEEG00000011960	mccc1 (ENSEEEG00000011984)	ATP11B (ENSEEEG00000012527)	ENSEEEG00000013906
Channel catfish	MODERN SPECIES	1	psmd1 (ENSIPUG00000024562)	htr2b (ENSIPUG00000024583)	ttc14 (ENSIPUG00000024586)	sox2 (ENSIPUG00000024592)	dnajc19 (ENSIPUG00000024593)	fxr1 (ENSIPUG00000024597)	ATP11B (ENSIPUG00000024606)	mccc1 (ENSIPUG00000024615)	lamp3 (ENSIPUG00000024619)	ENSIPUG00000024621	cers1 (ENSIPUG00000024624)	ncln (ENSIPUG00000024632)	s1pr4 (ENSIPUG00000024637)	myo9b (ENSIPUG00000024658)	use1 (ENSIPUG00000024672)	insrb (ENSIPUG00000024674) #22	arhgef18 (ENSIPUG00000024688) #21	enc3 (ENSIPUG00000024711)	timm13 (ENSIPUG00000024713)	ENSIPUG00000024717	lsm7 (ENSIPUG00000024724)	sass6 (ENSIPUG00000024737)	mfsd14a (ENSIPUG00000024745)	ENSIPUG00000024751	map1s (ENSIPUG00000024752)	CARTPT (ENSIPUG00000024756)	OSBPL1A (ENSIPUG00000024762)	trmt13 (ENSIPUG00000024787)	lrrc39 (ENSIPUG00000024790)	ENSIPUG00000024795	dbt (ENSIPUG00000024797)
Cyprinoidei	ANCESTRAL SPECIES	39	ENSGT00940000160342.f	ENSGT00940000157249	ENSGT00940000163944	ENSGT00390000005372.f.e	ENSGT00550000075065.b	ENSGT00940000164753.b	ENSGT00940000158204.d	ENSGT00390000013080	ENSGT01070000253775.b	ENSGT00940000156153	ENSGT00500000044890.a.a.f	ENSGT00940000153737.b	ENSGT00390000008856	ENSGT01030000235162	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00390000006932	ENSGT00940000157395	ENSGT00940000161296	ENSGT01020000230364.a.a.a.b.lb	ENSGT00390000008040.bb.a	ENSGT00940000155664.a.b	ENSGT00440000038072.c	ENSGT00940000155763.a.b	ENSGT00940000156388	ENSGT00990000210162
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	11	ENSGT00940000158204.d.a	ENSGT00390000013080.c	ENSGT01070000253775.b.e	ENSGT00940000156153.w	ENSGT00500000044890.a.a.f.k	ENSGT00940000153737.b.f	ENSGT00390000008856.y	ENSGT01030000235162.b.a.a.a.b	ENSGT00390000014361.q	ENSGT00940000155404.i.b.b #22	ENSGT00940000157375.c.c #21	ENSGT00950000182983.B.a.a.g	ENSGT00390000014000.b	ENSGT01030000235162.b.a.b	ENSGT00390000014361.r	ENSGT00940000155404.i.b.a #22	ENSGT00940000157375.c.d #21	ENSGT00950000182983.B.a.a.h	ENSGT00390000014000.a	ENSGT00940000159993	ENSGT00510000047872.q	ENSGT00390000006932.a	ENSGT00940000157395.h.b	ENSGT00940000161296.b	ENSGT01020000230364.a.a.a.b.lb.a	ENSGT00390000008040.bb.a.a	ENSGT00940000155664.a.b.b	ENSGT00940000155763.a.b.a	ENSGT00940000156388.b	ENSGT00990000210162.a	ENSGT00940000166256.i.a.b
Cyprininae_a	ANCESTRAL SPECIES	274														ENSGT01030000235162.b.a.b	ENSGT00390000014361.r	ENSGT00940000155404.i.b.a #22	ENSGT00940000157375.c.d #21	ENSGT00950000182983.B.a.a.h	ENSGT00390000014000.a	ENSGT00940000159993.x	ENSGT00510000047872.q	ENSGT00390000006932.a	ENSGT00940000157395.h.b	ENSGT00940000161296.b	ENSGT01020000230364.a.a.a.b.lb.a	ENSGT00390000008040.bb.a.a	ENSGT00940000155664.a.b.b	ENSGT00940000155763.a.b.a	ENSGT00940000156388.b	ENSGT00990000210162.a	ENSGT00940000166256.j.a
Golden-line barbel	MODERN SPECIES	86	ptpn4b (ENSSGRG00000028262)	ENSSGRG00000028260	crygs1 (ENSSGRG00000028259)	dpp4 (ENSSGRG00000028152)	GCG (ENSSGRG00000028150)	ENSSGRG00000028149	pcyt2 (ENSSGRG00000028060)	npb (ENSSGRG00000028058)	sgsh (ENSSGRG00000028057)	tspan7b (ENSSGRG00000028017)	mid1ip1b (ENSSGRG00000028016)	bcor (ENSSGRG00000028014)	ENSSGRG00000028013	ENSSGRG00000028011	use1 (ENSSGRG00000028008)	insrb (ENSSGRG00000027694) #22	ENSSGRG00000027681 #21	ARHGEF18 (ENSSGRG00000027680) #21	enc3 (ENSSGRG00000027679)	timm13 (ENSSGRG00000027676)	ENSSGRG00000027675	lsm7 (ENSSGRG00000027673)	sass6 (ENSSGRG00000027672)	mfsd14a1 (ENSSGRG00000027671)	mfsd14a1 (ENSSGRG00000027245)	abhd14a (ENSSGRG00000027219)	HYAL2 (ENSSGRG00000027215)	tusc2b (ENSSGRG00000027214)	rassf1 (ENSSGRG00000027212)	RAD54L2 (ENSSGRG00000027177)	bap1 (ENSSGRG00000027125)
Common carp reference	MODERN SPECIES	5	pcyt2 (ENSCCRG00000040996)	gnav1 (ENSCCRG00000060273)	npb (ENSCCRG00000065427)	sgsh (ENSCCRG00000042024)	slc26a11 (ENSCCRG00000081766)	tspan7b (ENSCCRG00000008001)	mid1ip1b (ENSCCRG00000078465)	bcor (ENSCCRG00000054263)	ENSCCRG00000060872	atp6ap2 (ENSCCRG00000007935)	ENSCCRG00000007992	ENSCCRG00000007994	ENSCCRG00000067783	ENSCCRG00000061073	use1 (ENSCCRG00000054847)	insrb (ENSCCRG00000034239) #22	ENSCCRG00000026342 #21	enc3 (ENSCCRG00000039206)	timm13 (ENSCCRG00000039213)	ENSCCRG00000061867	lsm7 (ENSCCRG00000061139)	sass6 (ENSCCRG00000020918)	mfsd14a1 (ENSCCRG00000039248)	abhd14a (ENSCCRG00000078617)	HYAL2 (ENSCCRG00000025358)	tusc2b (ENSCCRG00000020616)	rassf1 (ENSCCRG00000077438)	ENSCCRG00000025427	bap1 (ENSCCRG00000039948)	ENSCCRG00000032777	shisa10.2 (ENSCCRG00000032769)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	14	ENSCARG00000034000	ENSCARG00000034002	ENSCARG00000034007	ENSCARG00000034021	ENSCARG00000034053	rpp21 (ENSCARG00000034060)	rrp36 (ENSCARG00000034073)	ENSCARG00000034087	ENSCARG00000034095	ENSCARG00000034103	mfng (ENSCARG00000034159)	atp6ap2 (ENSCARG00000051655)	ENSCARG00000053192	ENSCARG00000053203	use1 (ENSCARG00000053218)	insrb (ENSCARG00000053402) #22	ENSCARG00000056833 #21	enc3 (ENSCARG00000056864)	timm13 (ENSCARG00000056873)	ENSCARG00000056908	lsm7 (ENSCARG00000056947)	sass6 (ENSCARG00000056981)	mfsd14a1 (ENSCARG00000057145)	abhd14a (ENSCARG00000057162)	HYAL2 (ENSCARG00000057193)	tusc2b (ENSCARG00000057225)	rassf1 (ENSCARG00000057264)	RAD54L2 (ENSCARG00000057376)	bap1 (ENSCARG00000058269)	shisa10.2 (ENSCARG00000058482)	shisa10.1 (ENSCARG00000058512)
Goldfish	MODERN SPECIES	81												ENSCARG00000032294	atp6ap2 (ENSCARG00000031714)	ENSCARG00000031681	use1 (ENSCARG00000031677)	insrb (ENSCARG00000069591) #22
Cyprininae	ANCESTRAL SPECIES	11	ENSGT00940000160342.f.b	ENSGT00940000157249	ENSGT00940000163944.a	ENSGT00390000005372.f.e.a.a	ENSGT00550000075065.b.a	ENSGT00940000164753.b.i	ENSGT00940000158204.d.a	ENSGT00390000013080.c	ENSGT01070000253775.b.e	ENSGT00940000156153.w	ENSGT00500000044890.a.a.f.k	ENSGT00940000153737.b.f	ENSGT00390000008856.y	ENSGT01030000235162.b.a.a.a.b	ENSGT00390000014361.q	ENSGT00940000155404.i.b.b #22	ENSGT00940000157375.c.c #21	ENSGT00950000182983.B.a.a.g	ENSGT00390000014000.b	ENSGT01030000235162.b.a.b	ENSGT00390000014361.r	ENSGT00940000155404.i.b.a #22	ENSGT00940000157375.c.d #21	ENSGT00950000182983.B.a.a.h	ENSGT00390000014000.a	ENSGT00940000159993	ENSGT00510000047872.q	ENSGT00390000006932.a	ENSGT00940000157395.h.b	ENSGT00940000161296.b	ENSGT01020000230364.a.a.a.b.lb.a
Goldfish	MODERN SPECIES	41	mettl21a (ENSCARG00000029612)	ENSCARG00000029602	dpp4 (ENSCARG00000023156)	gcga (ENSCARG00000022989)	pcyt2 (ENSCARG00000022549)	gnav1 (ENSCARG00000022509)	npb (ENSCARG00000022501)	sgsh (ENSCARG00000022494)	slc26a11 (ENSCARG00000022463)	tspan7b (ENSCARG00000022456)	mid1ip1b (ENSCARG00000022453)	bcor (ENSCARG00000022443)	atp6ap2 (ENSCARG00000022270)	ENSCARG00000022239	use1 (ENSCARG00000022219)	insrb (ENSCARG00000020044) #22	ARHGEF18 (ENSCARG00000019945) #21	enc3 (ENSCARG00000019935)	timm13 (ENSCARG00000019929)	ENSCARG00000019895	lsm7 (ENSCARG00000019867)	sass6 (ENSCARG00000019569)	mfsd14a1 (ENSCARG00000019493)	abhd14a (ENSCARG00000019463)	HYAL2 (ENSCARG00000019456)	tusc2b (ENSCARG00000019446)	rassf1 (ENSCARG00000019439)	cyb561d2 (ENSCARG00000019436)	ENSCARG00000019430	ENSCARG00000019425	ENSCARG00000019423
Cyprininae_a	ANCESTRAL SPECIES	144	ENSGT00940000160342.f.b	ENSGT00940000157249	ENSGT00940000163944.a	ENSGT00390000005372.f.e.a.a	ENSGT00550000075065.b.a	ENSGT00940000164753.b.i	ENSGT00940000158204.d.a	ENSGT00390000013080.d	ENSGT01070000253775.b.e	ENSGT00940000156153.w	ENSGT00500000044890.a.a.f.k	ENSGT00940000153737.b.f	ENSGT00390000008856.y	ENSGT01030000235162.b.a.a.a.b	ENSGT00390000014361.q	ENSGT00940000155404.i.b.b #22	ENSGT00940000157375.c.c #21	ENSGT00950000182983.B.a.a.g	ENSGT00390000014000.b	ENSGT00940000159993.w.a	ENSGT00510000047872.r	ENSGT00390000006932.b	ENSGT00940000157395.h.a	ENSGT00940000157395.g	ENSGT00940000161296.a	ENSGT01020000230364.a.a.a.b.lb.b	ENSGT00390000008040.bb.a.b	ENSGT00940000155664.a.b.a	ENSGT00440000038072.c	ENSGT00940000155763.a.b.b	ENSGT00940000156388.a
Common carp reference	MODERN SPECIES	43	mettl21a (ENSCCRG00000054423)	dpp4 (ENSCCRG00000044681)	gcga (ENSCCRG00000046178)	pcyt2 (ENSCCRG00000046193)	gnav1 (ENSCCRG00000072816)	npb (ENSCCRG00000078279)	sgsh (ENSCCRG00000057727)	slc26a11 (ENSCCRG00000025067)	tspan7b (ENSCCRG00000025062)	mid1ip1b (ENSCCRG00000069082)	bcor (ENSCCRG00000008007)	atp6ap2 (ENSCCRG00000008019)	ENSCCRG00000009734	ENSCCRG00000060187	use1 (ENSCCRG00000047967)	insrb (ENSCCRG00000026255) #22	ENSCCRG00000047459 #21	enc3 (ENSCCRG00000081540)	timm13 (ENSCCRG00000078446)	ENSCCRG00000070956	lsm7 (ENSCCRG00000020914)	sass6 (ENSCCRG00000039233)	mfsd14a1 (ENSCCRG00000020976)	HYAL2 (ENSCCRG00000075870)	tusc2b (ENSCCRG00000055777)	rassf1 (ENSCCRG00000020631)	cyb561d2 (ENSCCRG00000025423)	ENSCCRG00000078526	ENSCCRG00000020662	bap1 (ENSCCRG00000032782)	shisa10.2 (ENSCCRG00000011552)
Golden-line barbel	MODERN SPECIES	162	MRAS (ENSSGRG00000036267)	ptpn4b (ENSSGRG00000036272)	krt96 (ENSSGRG00000036403)	dpp4 (ENSSGRG00000036406)	gcga (ENSSGRG00000036409)	pcyt2 (ENSSGRG00000036415)	gnav1 (ENSSGRG00000036556)	npb (ENSSGRG00000036559)	slc26a11 (ENSSGRG00000036564)	sgsh (ENSSGRG00000036748)	tspan7b (ENSSGRG00000036749)	mid1ip1b (ENSSGRG00000036781)	bcor (ENSSGRG00000036782)	atp6ap2 (ENSSGRG00000036785)	use1 (ENSSGRG00000036788)	insrb (ENSSGRG00000036834) #22	ARHGEF18 (ENSSGRG00000038715) #21	enc3 (ENSSGRG00000038780)	timm13 (ENSSGRG00000038782)	ENSSGRG00000038795	sass6 (ENSSGRG00000038801)	lsm7 (ENSSGRG00000039110)	ENSSGRG00000039112	abhd14a (ENSSGRG00000039113)	HYAL2 (ENSSGRG00000039114)	tusc2b (ENSSGRG00000039115)	rassf1 (ENSSGRG00000039129)	cyb561d2 (ENSSGRG00000039130)	RAD54L2 (ENSSGRG00000039131)	ENSSGRG00000039154	shisa10.2 (ENSSGRG00000039155)
Zebrafish	MODERN SPECIES	14	KRT222 (ENSDARG00000071518)	crygs1 (ENSDARG00000042992)	mettl21a (ENSDARG00000012051)	dpp4 (ENSDARG00000079420)	gcga (ENSDARG00000079296)	pcyt2 (ENSDARG00000043003)	gnav1 (ENSDARG00000043006)	npb (ENSDARG00000078828)	sgsh (ENSDARG00000032087)	slc26a11 (ENSDARG00000043021)	tspan7b (ENSDARG00000008407)	mid1ip1b (ENSDARG00000019302)	bcor (ENSDARG00000017798)	atp6ap2 (ENSDARG00000008735)	use1 (ENSDARG00000007250)	insrb (ENSDARG00000071524) #22	ARHGEF18 (ENSDARG00000042308) #21	enc3 (ENSDARG00000058322)	timm13 (ENSDARG00000058297)	ENSDARG00000029841	lsm7 (ENSDARG00000058328)	sass6 (ENSDARG00000058346)	mfsd14a1 (ENSDARG00000043055)	abhd14a (ENSDARG00000058367)	HYAL2 (ENSDARG00000062997)	tusc2b (ENSDARG00000025340)	rassf1 (ENSDARG00000004840)	cyb561d2 (ENSDARG00000044114)	RAD54L2 (ENSDARG00000063031)	bap1 (ENSDARG00000063051)	ENSDARG00000071541
Clupeiformes	ANCESTRAL SPECIES	9	ENSGT00390000002505	ENSGT00730000111147	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00940000158995.a	ENSGT00940000163126.a.b	ENSGT00940000159258.d	ENSGT00940000165680.A
Atlantic herring	MODERN SPECIES	1	cherp (ENSCHAG00000003141)	rx1 (ENSCHAG00000003424)	ENSCHAG00000003435	MATK (ENSCHAG00000003464)	ZFR2 (ENSCHAG00000003982)	ATCAY (ENSCHAG00000004318)	mibp (ENSCHAG00000004457)	loxl5a (ENSCHAG00000004515)	mydgf (ENSCHAG00000004580)	tnfaip8l1 (ENSCHAG00000004596)	CERS1 (ENSCHAG00000004630)	ncln (ENSCHAG00000004644)	s1pr4 (ENSCHAG00000004854)	MYO9B (ENSCHAG00000004904)	use1 (ENSCHAG00000005482)	insrb (ENSCHAG00000005950) #22	ARHGEF18 (ENSCHAG00000016034) #21	enc3 (ENSCHAG00000016176)	timm13 (ENSCHAG00000016192)	ENSCHAG00000016219	lsm7 (ENSCHAG00000016232)	ENSCHAG00000016253	cers4a (ENSCHAG00000016263)	fbn2b (ENSCHAG00000016353)	CTXN1 (ENSCHAG00000019520)	timm44 (ENSCHAG00000020190)	hnrnpm (ENSCHAG00000019546)	ENSCHAG00000020582	marchf2 (ENSCHAG00000020646)	ENSCHAG00000020666	ENSCHAG00000020682
Denticle herring	MODERN SPECIES	4	rad23ab (ENSDCDG00000026602)	ENSDCDG00000026607	cherp (ENSDCDG00000026616)	rx1 (ENSDCDG00000026630)	ENSDCDG00000026637	ATCAY (ENSDCDG00000026997)	mibp (ENSDCDG00000027000)	loxl5a (ENSDCDG00000027005)	mydgf (ENSDCDG00000027013)	tnfaip8l1 (ENSDCDG00000027016)	CERS1 (ENSDCDG00000027018)	ncln (ENSDCDG00000027020)	s1pr4 (ENSDCDG00000027040)	MYO9B (ENSDCDG00000027057)	use1 (ENSDCDG00000027172)	insrb (ENSDCDG00000027198) #22	ARHGEF18 (ENSDCDG00000028647) #21	enc3 (ENSDCDG00000028653)	timm13 (ENSDCDG00000028654)	ENSDCDG00000028657	lsm7 (ENSDCDG00000028667)	ENSDCDG00000028670	cers4a (ENSDCDG00000028672)	fbn2b (ENSDCDG00000028772)	CTXN1 (ENSDCDG00000031272)	timm44 (ENSDCDG00000031285)	hnrnpm (ENSDCDG00000031346)	ENSDCDG00000031365	marchf2 (ENSDCDG00000031369)	ENSDCDG00000031377	ENSDCDG00000031414
Euteleosteomorpha	ANCESTRAL SPECIES	46	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00950000183158.B.a.a	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT00940000160775	ENSGT00940000162148	ENSGT01030000234559.a.a.b.a.a.a	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.d	ENSGT00950000183158.B.a.a	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00940000158995.a
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00940000158995.a	ENSGT00940000161659	ENSGT00940000163126.a.b
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00970000198139	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT01030000235960	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Mangrove rivulus	MODERN SPECIES	8	rx1 (ENSKMAG00000022207)	ENSKMAG00000022204	MATK (ENSKMAG00000022203)	ZFR2 (ENSKMAG00000022201)	ATCAY (ENSKMAG00000022198)	mibp (ENSKMAG00000022191)	loxl5a (ENSKMAG00000022188)	mydgf (ENSKMAG00000022184)	tnfaip8l1 (ENSKMAG00000022183)	cope (ENSKMAG00000022180)	CERS1 (ENSKMAG00000022179)	ncln (ENSKMAG00000022175)	s1pr4 (ENSKMAG00000022170)	MYO9B (ENSKMAG00000022167)	use1 (ENSKMAG00000022165)	insrb (ENSKMAG00000022163) #22	ARHGEF18 (ENSKMAG00000022161) #21	enc3 (ENSKMAG00000022158)	timm13 (ENSKMAG00000022156)	ENSKMAG00000022153	ENSKMAG00000022152	lsm7 (ENSKMAG00000022151)	ENSKMAG00000022150	cers4a (ENSKMAG00000022149)	fbn2b (ENSKMAG00000022145)	CTXN1 (ENSKMAG00000022142)	timm44 (ENSKMAG00000022137)	hnrnpm (ENSKMAG00000022136)	dmap1 (ENSKMAG00000022135)	RNF220 (ENSKMAG00000022134)	ENSKMAG00000022133
Turquoise killifish	MODERN SPECIES	1626	ENSNFUG00015025467	ATCAY (ENSNFUG00015025466)	NMRK2 (ENSNFUG00015025465)	loxl5a (ENSNFUG00015025464)	ENSNFUG00015025463	mydgf (ENSNFUG00015025462)	TNFAIP8 (ENSNFUG00015025461)	cope (ENSNFUG00015025460)	CERS1 (ENSNFUG00015025459)	ncln (ENSNFUG00015025458)	ENSNFUG00015025455	s1pr4 (ENSNFUG00015025454)	MYO9B (ENSNFUG00015025453)	USE1 (ENSNFUG00015025452)	ENSNFUG00015025451	INSRB (ENSNFUG00015025450) #22	ARHGEF18 (ENSNFUG00015025449) #21	ENC1L (ENSNFUG00015025447)	timm13 (ENSNFUG00015025446)	ENSNFUG00015025445	ENSNFUG00015025444	lsm7 (ENSNFUG00015025443)	ENSNFUG00015025442	cers4a (ENSNFUG00015025441)	fbn2b (ENSNFUG00015025440)	CTXN1 (ENSNFUG00015025439)	timm44 (ENSNFUG00015025438)	hnrnpm (ENSNFUG00015025437)	DMAP1 (ENSNFUG00015025436)	ENSNFUG00015025435	RNF220 (ENSNFUG00015025434)
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.b	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.b	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
NAME_6	ANCESTRAL SPECIES	19	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.b	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Amazon molly	MODERN SPECIES	303	rx1 (ENSPFOG00000009970)	MATK (ENSPFOG00000021697)	ZFR2 (ENSPFOG00000010053)	ATCAY (ENSPFOG00000010457)	mibp (ENSPFOG00000023631)	loxl5a (ENSPFOG00000023637)	loxl5a (ENSPFOG00000010562)	mydgf (ENSPFOG00000010616)	tnfaip8l1 (ENSPFOG00000010668)	cope (ENSPFOG00000010691)	CERS1 (ENSPFOG00000010753)	ncln (ENSPFOG00000010844)	s1pr4 (ENSPFOG00000019999)	MYO9B (ENSPFOG00000011070)	use1 (ENSPFOG00000011442)	insrb (ENSPFOG00000011513) #22	ENSPFOG00000012136 #21	ARHGEF18 (ENSPFOG00000012251) #21	enc3 (ENSPFOG00000012378)	ENSPFOG00000020000	timm13 (ENSPFOG00000012405)	ENSPFOG00000012424	lsm7 (ENSPFOG00000012467)	ENSPFOG00000012496	cers4a (ENSPFOG00000012524)	fbn2b (ENSPFOG00000012783)	CTXN1 (ENSPFOG00000020001)	timm44 (ENSPFOG00000013565)	hnrnpm (ENSPFOG00000013612)	dmap1 (ENSPFOG00000013730)	RNF220 (ENSPFOG00000013774)
Sailfin molly	MODERN SPECIES	267	UQCC5 (ENSPLAG00000023624)	kctd6b (ENSPLAG00000023618)	abhd6b (ENSPLAG00000023610)	slmapb (ENSPLAG00000023558)	cers5 (ENSPLAG00000023403)	ENSPLAG00000023324	trh (ENSPLAG00000000651)	TMCC1 (ENSPLAG00000023265)	PLXND1 (ENSPLAG00000023198)	exorh (ENSPLAG00000023049)	IFT122 (ENSPLAG00000023031)	ENSPLAG00000022897	ENSPLAG00000022876	CRELD1 (ENSPLAG00000022854)	ENSPLAG00000022812	insrb (ENSPLAG00000022777) #22	ARHGEF18 (ENSPLAG00000022203) #21
Guppy	MODERN SPECIES	456	ENSPREG00000017656	MATK (ENSPREG00000017635)	ZFR2 (ENSPREG00000017580)	ATCAY (ENSPREG00000017565)	mibp (ENSPREG00000017542)	loxl5a (ENSPREG00000017527)	mydgf (ENSPREG00000017513)	tnfaip8l1 (ENSPREG00000017508)	cope (ENSPREG00000017488)	ENSPREG00000017472	CERS1 (ENSPREG00000017449)	ncln (ENSPREG00000017424)	s1pr4 (ENSPREG00000017375)	MYO9B (ENSPREG00000017023)	use1 (ENSPREG00000016894)	ENSPREG00000016870 #22	ARHGEF18 (ENSPREG00000016800) #21	enc3 (ENSPREG00000016753)	timm13 (ENSPREG00000016743)	ENSPREG00000016734	lsm7 (ENSPREG00000016718)	ENSPREG00000016703	cers4a (ENSPREG00000016605)	ENSPREG00000016552	ENSPREG00000016329	CTXN1 (ENSPREG00000016283)	timm44 (ENSPREG00000016196)	hnrnpm (ENSPREG00000016114)	dmap1 (ENSPREG00000016078)	RNF220 (ENSPREG00000016057)	ENSPREG00000016040
Platyfish	MODERN SPECIES	23	haus5 (ENSXMAG00000018862)	rx1 (ENSXMAG00000018858)	MATK (ENSXMAG00000018839)	ENSXMAG00000018784	ATCAY (ENSXMAG00000023988)	mibp (ENSXMAG00000018750)	loxl5a (ENSXMAG00000022649)	mydgf (ENSXMAG00000028233)	tnfaip8l1 (ENSXMAG00000018738)	cope (ENSXMAG00000018730)	CERS1 (ENSXMAG00000018726)	ncln (ENSXMAG00000018708)	s1pr4 (ENSXMAG00000021378)	MYO9B (ENSXMAG00000018704)	use1 (ENSXMAG00000022582)	insrb (ENSXMAG00000018648) #22	ARHGEF18 (ENSXMAG00000018641) #21	enc3 (ENSXMAG00000018635)	timm13 (ENSXMAG00000022411)	ENSXMAG00000018631	lsm7 (ENSXMAG00000018630)	ENSXMAG00000018626	cers4a (ENSXMAG00000028396)	ENSXMAG00000029730	ENSXMAG00000021484	ENSXMAG00000022955	ENSXMAG00000026777	CTXN1 (ENSXMAG00000019960)	timm44 (ENSXMAG00000018511)	hnrnpm (ENSXMAG00000018502)	dmap1 (ENSXMAG00000018492)
NAME_4	ANCESTRAL SPECIES	17	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000155273	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Sheepshead minnow	MODERN SPECIES	142	haus5 (ENSCVAG00000022215)	rx1 (ENSCVAG00000022203)	MATK (ENSCVAG00000022176)	ENSCVAG00000022133	ATCAY (ENSCVAG00000022114)	mibp (ENSCVAG00000022110)	loxl5a (ENSCVAG00000022083)	mydgf (ENSCVAG00000021774)	tnfaip8l1 (ENSCVAG00000021771)	cope (ENSCVAG00000021751)	CERS1 (ENSCVAG00000021722)	ncln (ENSCVAG00000021714)	s1pr4 (ENSCVAG00000021655)	MYO9B (ENSCVAG00000021647)	use1 (ENSCVAG00000021584)	insrb (ENSCVAG00000021557) #22	ENSCVAG00000021533	ARHGEF18 (ENSCVAG00000021523) #21	enc3 (ENSCVAG00000021503)	timm13 (ENSCVAG00000021490)	ENSCVAG00000021461	lsm7 (ENSCVAG00000021091)	ENSCVAG00000021074	cers4a (ENSCVAG00000021056)	fbn2b (ENSCVAG00000021044)	CTXN1 (ENSCVAG00000020871)	timm44 (ENSCVAG00000020856)	hnrnpm (ENSCVAG00000020838)	dmap1 (ENSCVAG00000020823)	RNF220 (ENSCVAG00000020747)	guk1b (ENSCVAG00000020727)
Mummichog	MODERN SPECIES	2394	rx1 (ENSFHEG00000005391)	MATK (ENSFHEG00000005404)	ZFR2 (ENSFHEG00000005422)	ATCAY (ENSFHEG00000005510)	mibp (ENSFHEG00000005533)	loxl5a (ENSFHEG00000005538)	mydgf (ENSFHEG00000005541)	tnfaip8l1 (ENSFHEG00000005552)	cope (ENSFHEG00000005633)	CERS1 (ENSFHEG00000000880)	ncln (ENSFHEG00000005759)	s1pr4 (ENSFHEG00000005776)	MYO9B (ENSFHEG00000005893)	ENSFHEG00000005910	use1 (ENSFHEG00000005919)	insrb (ENSFHEG00000005985) #22	ENSFHEG00000005998	ARHGEF18 (ENSFHEG00000006212) #21	enc3 (ENSFHEG00000006243)	timm13 (ENSFHEG00000006257)	ENSFHEG00000006276	ENSFHEG00000006334	lsm7 (ENSFHEG00000006349)	ENSFHEG00000006356	cers4a (ENSFHEG00000006377)	ENSFHEG00000006386	fbn2b (ENSFHEG00000006574)	CTXN1 (ENSFHEG00000006587)	timm44 (ENSFHEG00000006601)	dmap1 (ENSFHEG00000006666)	hnrnpm (ENSFHEG00000006712)
Oryzias	ANCESTRAL SPECIES	5	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a.h	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT01030000235960	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Oryzias_b	ANCESTRAL SPECIES	15	ENSGT00940000163467.a.b.b.a.a.i.a	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a.h	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000168428.b.a
Indian medaka	MODERN SPECIES	13	ENSOMEG00000011765	rx1 (ENSOMEG00000011791)	MATK (ENSOMEG00000000282)	ENSOMEG00000000293	ATCAY (ENSOMEG00000012034)	mibp (ENSOMEG00000012080)	loxl5a (ENSOMEG00000012102)	mydgf (ENSOMEG00000012113)	tnfaip8l1 (ENSOMEG00000012123)	cope (ENSOMEG00000012167)	CERS1 (ENSOMEG00000012203)	ncln (ENSOMEG00000012264)	s1pr4 (ENSOMEG00000012290)	ENSOMEG00000012309	use1 (ENSOMEG00000012330)	insrb (ENSOMEG00000000314) #22	ARHGEF18 (ENSOMEG00000012588) #21	enc3 (ENSOMEG00000012634)	timm13 (ENSOMEG00000012645)	ENSOMEG00000012764	lsm7 (ENSOMEG00000012806)	ENSOMEG00000012817	cers4a (ENSOMEG00000012858)	ENSOMEG00000012879	ENSOMEG00000012891	ENSOMEG00000012914	ENSOMEG00000012925	ENSOMEG00000012931	ENSOMEG00000012960	CTXN1 (ENSOMEG00000012973)	timm44 (ENSOMEG00000013003)
Javanese ricefish	MODERN SPECIES	18	haus5 (ENSOJAG00000015139)	ENSOJAG00000015158	rx1 (ENSOJAG00000015203)	MATK (ENSOJAG00000015293)	ENSOJAG00000015984	ATCAY (ENSOJAG00000015997)	mibp (ENSOJAG00000016002)	loxl5a (ENSOJAG00000016014)	mydgf (ENSOJAG00000016018)	tnfaip8l1 (ENSOJAG00000016024)	cope (ENSOJAG00000016051)	CERS1 (ENSOJAG00000016185)	ncln (ENSOJAG00000016226)	s1pr4 (ENSOJAG00000016869)	use1 (ENSOJAG00000018599)	insrb (ENSOJAG00000018677) #22	ENSOJAG00000019716 #21	enc3 (ENSOJAG00000019874)	timm13 (ENSOJAG00000019883)	ENSOJAG00000019896	ENSOJAG00000019908	ENSOJAG00000019919	lsm7 (ENSOJAG00000019931)	cers4a (ENSOJAG00000019952)	fbn2b (ENSOJAG00000020033)	CTXN1 (ENSOJAG00000021054)	timm44 (ENSOJAG00000021063)	hnrnpm (ENSOJAG00000021087)	dmap1 (ENSOJAG00000021112)	RNF220 (ENSOJAG00000021134)	guk1b (ENSOJAG00000021142)
Oryzias_a	ANCESTRAL SPECIES	24	ENSGT00940000165447	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148.o	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a.h	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22
Japanese Medaka HdrR	MODERN SPECIES	18	loxl5a (ENSORLG00000023435)	mydgf (ENSORLG00000025868)	ENSORLG00000029205	ENSORLG00000029715	tnfaip8l1 (ENSORLG00000030570)	ENSORLG00000023478	ENSORLG00000027936	ENSORLG00000021880	cope (ENSORLG00000017456)	CERS1 (ENSORLG00000017460)	ncln (ENSORLG00000017473)	s1pr4 (ENSORLG00000017476)	ENSORLG00000029466	use1 (ENSORLG00000019519)	ENSORLG00000027043	ENSORLG00000018568 #22	ENSORLG00000023652	ENSORLG00000029332
Chinese medaka	MODERN SPECIES	952											CERS1 (ENSOSIG00000007813)	ncln (ENSOSIG00000007766)	s1pr4 (ENSOSIG00000007763)	ENSOSIG00000007564	use1 (ENSOSIG00000007543)	insrb (ENSOSIG00000007494) #22
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Pomacentridae	ANCESTRAL SPECIES	123	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.w.a	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21
Pomacentridae_A	ANCESTRAL SPECIES	121	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.w.a	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21
Amphiprion	ANCESTRAL SPECIES	148	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT00940000156845.w.a	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21
Orange clownfish	MODERN SPECIES	11	rx1 (ENSAPEG00000001842)	MATK (ENSAPEG00000001792)	ENSAPEG00000001776	ZFR2 (ENSAPEG00000001753)	ATCAY (ENSAPEG00000001611)	mibp (ENSAPEG00000001585)	loxl5a (ENSAPEG00000001487)	mydgf (ENSAPEG00000001472)	tnfaip8l1 (ENSAPEG00000001460)	cope (ENSAPEG00000001420)	CERS1 (ENSAPEG00000001401)	ncln (ENSAPEG00000001333)	s1pr4 (ENSAPEG00000001323)	MYO9B (ENSAPEG00000001154)	use1 (ENSAPEG00000001100)	insrb (ENSAPEG00000000991) #22	ENSAPEG00000000805 #21	ENSAPEG00000000734 #21	lsm7 (ENSAPEG00000000694)	ENSAPEG00000000302	timm13 (ENSAPEG00000024511)	enc3 (ENSAPEG00000024507)	enc3 (ENSAPEG00000024496)	timm13 (ENSAPEG00000024492)	ENSAPEG00000024470	ENSAPEG00000024461	ENSAPEG00000024453	lsm7 (ENSAPEG00000024447)	cers4a (ENSAPEG00000024438)	fbn2b (ENSAPEG00000024403)	CTXN1 (ENSAPEG00000024387)
Clown anemonefish	MODERN SPECIES	929															use1 (ENSAOCG00000023513)	insrb (ENSAOCG00000023485) #22
Spiny chromis	MODERN SPECIES	328										map7d1b (ENSAPOG00000002841)	ncln (ENSAPOG00000002896)	s1pr4 (ENSAPOG00000002927)	MYO9B (ENSAPOG00000003038)	use1 (ENSAPOG00000003076)	ENSAPOG00000003094	insrb (ENSAPOG00000003154) #22	ARHGEF18 (ENSAPOG00000003252) #21
Bicolor damselfish	DUPLICATION
Bicolor damselfish	MODERN SPECIES	936									tnfaip8l1 (ENSSPAG00000006031)	cope (ENSSPAG00000006011)	CERS1 (ENSSPAG00000005980)	ncln (ENSSPAG00000005931)	s1pr4 (ENSSPAG00000005907)	MYO9B (ENSSPAG00000005822)	use1 (ENSSPAG00000005800)	INSR (ENSSPAG00000005776) #22
Bicolor damselfish	MODERN SPECIES	2471																insrb (ENSSPAG00000011101) #22
Cichlidae	ANCESTRAL SPECIES	17	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Nile tilapia	MODERN SPECIES	14	rx1 (ENSONIG00000034450)	MATK (ENSONIG00000001878)	ZFR2 (ENSONIG00000001871)	ATCAY (ENSONIG00000001868)	mibp (ENSONIG00000001861)	loxl5a (ENSONIG00000029087)	mydgf (ENSONIG00000031446)	tnfaip8l1 (ENSONIG00000037367)	cope (ENSONIG00000001847)	CERS1 (ENSONIG00000001845)	ncln (ENSONIG00000001833)	ENSONIG00000036656	s1pr4 (ENSONIG00000001832)	MYO9B (ENSONIG00000001830)	use1 (ENSONIG00000001829)	insrb (ENSONIG00000001811) #22	ARHGEF18 (ENSONIG00000001810) #21	enc3 (ENSONIG00000001808)	timm13 (ENSONIG00000031033)	ENSONIG00000001805	ENSONIG00000001803	lsm7 (ENSONIG00000001801)	cers4a (ENSONIG00000001795)	CTXN1 (ENSONIG00000020816)	timm44 (ENSONIG00000001772)	hnrnpm (ENSONIG00000001758)	dmap1 (ENSONIG00000001756)	RNF220 (ENSONIG00000001753)	ENSONIG00000034651	guk1b (ENSONIG00000001750)	ENSONIG00000040351
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	26	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000155138	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Haplochromini	ANCESTRAL SPECIES	16	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.u.a	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Burton s mouthbrooder	MODERN SPECIES	394	ENSHBUG00000005211	rx1 (ENSHBUG00000005148)	MATK (ENSHBUG00000005141)	ZFR2 (ENSHBUG00000005126)	ATCAY (ENSHBUG00000005116)	mibp (ENSHBUG00000005101)	loxl5a (ENSHBUG00000005093)	mydgf (ENSHBUG00000005082)	tnfaip8l1 (ENSHBUG00000005068)	cope (ENSHBUG00000005056)	CERS1 (ENSHBUG00000005009)	ncln (ENSHBUG00000005001)	s1pr4 (ENSHBUG00000004919)	MYO9B (ENSHBUG00000004905)	use1 (ENSHBUG00000004811)	insrb (ENSHBUG00000004766) #22	ARHGEF18 (ENSHBUG00000004734) #21	enc3 (ENSHBUG00000004684)	ENSHBUG00000004671	ENSHBUG00000004650	timm13 (ENSHBUG00000004633)	lsm7 (ENSHBUG00000004616)	ENSHBUG00000004610	cers4a (ENSHBUG00000004592)	ENSHBUG00000000724	ENSHBUG00000023592	ENSHBUG00000023570	ENSHBUG00000023539	CTXN1 (ENSHBUG00000023484)	timm44 (ENSHBUG00000023470)	hnrnpm (ENSHBUG00000023451)
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.u.a	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845.u.a	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Eastern happy	MODERN SPECIES	14	ENSACLG00000022076	rx1 (ENSACLG00000022052)	MATK (ENSACLG00000022027)	ZFR2 (ENSACLG00000021987)	ATCAY (ENSACLG00000021970)	mibp (ENSACLG00000021925)	ENSACLG00000021912	mydgf (ENSACLG00000021835)	tnfaip8l1 (ENSACLG00000021825)	cope (ENSACLG00000021749)	CERS1 (ENSACLG00000021733)	ncln (ENSACLG00000021634)	s1pr4 (ENSACLG00000021610)	MYO9B (ENSACLG00000021513)	use1 (ENSACLG00000021469)	insrb (ENSACLG00000021318) #22	ARHGEF18 (ENSACLG00000021252) #21	enc3 (ENSACLG00000021240)	ENSACLG00000021213	timm13 (ENSACLG00000021201)	ENSACLG00000021120	ENSACLG00000021095	lsm7 (ENSACLG00000021021)	cers4a (ENSACLG00000020931)	fbn2b (ENSACLG00000020763)	CTXN1 (ENSACLG00000020707)	timm44 (ENSACLG00000020675)	hnrnpm (ENSACLG00000020495)	dmap1 (ENSACLG00000020455)	RNF220 (ENSACLG00000020448)	guk1b (ENSACLG00000020424)
Zebra mbuna	MODERN SPECIES	135															ENSMZEG00005028047	insrb (ENSMZEG00005028048) #22	enc3 (ENSMZEG00005028049)	ARHGEF18 (ENSMZEG00005028050) #21	ENSMZEG00005028052	timm13 (ENSMZEG00005028053)	ENSMZEG00005028054	lsm7 (ENSMZEG00005028055)	ENSMZEG00005028056	ENSMZEG00005028057
P. nyererei	MODERN SPECIES	478							loxl5a (ENSPNYG00000007689)	mydgf (ENSPNYG00000007672)	tnfaip8l1 (ENSPNYG00000007660)	cope (ENSPNYG00000007615)	CERS1 (ENSPNYG00000007584)	ncln (ENSPNYG00000007548)	s1pr4 (ENSPNYG00000007509)	MYO9B (ENSPNYG00000007412)	use1 (ENSPNYG00000007375)	insrb (ENSPNYG00000007318) #22	ARHGEF18 (ENSPNYG00000007253) #21	enc3 (ENSPNYG00000007231)	timm13 (ENSPNYG00000007215)	ENSPNYG00000006986	lsm7 (ENSPNYG00000006938)	ENSPNYG00000006923	cers4a (ENSPNYG00000006898)	fbn2b (ENSPNYG00000006768)	CTXN1 (ENSPNYG00000006736)	timm44 (ENSPNYG00000006701)	hnrnpm (ENSPNYG00000006542)	dmap1 (ENSPNYG00000006495)	RNF220 (ENSPNYG00000006482)	guk1b (ENSPNYG00000006461)	ENSPNYG00000006384
Lyretail cichlid	MODERN SPECIES	390	rx1 (ENSNBRG00000014827)	MATK (ENSNBRG00000014846)	ZFR2 (ENSNBRG00000014888)	ATCAY (ENSNBRG00000014938)	mibp (ENSNBRG00000015017)	loxl5a (ENSNBRG00000015111)	mydgf (ENSNBRG00000015184)	tnfaip8l1 (ENSNBRG00000015196)	cope (ENSNBRG00000015227)	ENSNBRG00000015253	ncln (ENSNBRG00000015281)	s1pr4 (ENSNBRG00000015337)	ENSNBRG00000015344	use1 (ENSNBRG00000015351)	ENSNBRG00000015369	insrb (ENSNBRG00000015391) #22	ARHGEF18 (ENSNBRG00000015464) #21	enc3 (ENSNBRG00000015614)	timm13 (ENSNBRG00000015631)	ENSNBRG00000015708	ENSNBRG00000015760	lsm7 (ENSNBRG00000015770)	ENSNBRG00000015780	cers4a (ENSNBRG00000015790)	ENSNBRG00000015836	ENSNBRG00000015944	CTXN1 (ENSNBRG00000015968)	timm44 (ENSNBRG00000015975)	hnrnpm (ENSNBRG00000015999)	dmap1 (ENSNBRG00000016076)	RNF220 (ENSNBRG00000016103)
Midas cichlid	MODERN SPECIES	595	rx1 (ENSACIG00000007581)	MATK (ENSACIG00000007554)	ZFR2 (ENSACIG00000007508)	ATCAY (ENSACIG00000007378)	mibp (ENSACIG00000007145)	loxl5a (ENSACIG00000007031)	mydgf (ENSACIG00000006994)	tnfaip8l1 (ENSACIG00000006979)	cope (ENSACIG00000006952)	CERS1 (ENSACIG00000006918)	ncln (ENSACIG00000006875)	s1pr4 (ENSACIG00000006847)	ENSACIG00000006835	ENSACIG00000006823	use1 (ENSACIG00000006802)	insrb (ENSACIG00000006754) #22	ENSACIG00000006645 #21	ENSACIG00000006631	enc3 (ENSACIG00000006623)	timm13 (ENSACIG00000006612)	ENSACIG00000006594	ENSACIG00000006578	ENSACIG00000006564	lsm7 (ENSACIG00000006498)
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Eupercaria	ANCESTRAL SPECIES	8	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT00940000159560	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000162251	ENSGT00390000004877	ENSGT00940000155273	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a
Fugu	MODERN SPECIES	12	haus5 (ENSTRUG00000010882)	rx1 (ENSTRUG00000010917)	MATK (ENSTRUG00000010957)	ZFR2 (ENSTRUG00000011108)	ATCAY (ENSTRUG00000011254)	mibp (ENSTRUG00000011362)	loxl5a (ENSTRUG00000023745)	mydgf (ENSTRUG00000011621)	tnfaip8l1 (ENSTRUG00000029290)	cope (ENSTRUG00000011693)	CERS1 (ENSTRUG00000011752)	ncln (ENSTRUG00000011791)	s1pr4 (ENSTRUG00000011913)	MYO9B (ENSTRUG00000011915)	use1 (ENSTRUG00000019549)	insrb (ENSTRUG00000012281) #22	ARHGEF18 (ENSTRUG00000012535) #21	enc3 (ENSTRUG00000012650)	timm13 (ENSTRUG00000032063)	ENSTRUG00000012735	lsm7 (ENSTRUG00000022913)	ENSTRUG00000012838	cers4a (ENSTRUG00000012847)	fbn2b (ENSTRUG00000012996)	CTXN1 (ENSTRUG00000013685)	timm44 (ENSTRUG00000013690)	hnrnpm (ENSTRUG00000013783)	dmap1 (ENSTRUG00000013929)	RNF220 (ENSTRUG00000027296)	guk1b (ENSTRUG00000014041)	ENSTRUG00000029522
Tetraodon	MODERN SPECIES		xpr1a (ENSTNIG00000015503)	sin3b (ENSTNIG00000015504)	rx1 (ENSTNIG00000015505)	MATK (ENSTNIG00000015506)	ENSTNIG00000015507	ATCAY (ENSTNIG00000015508)	mibp (ENSTNIG00000015509)	loxl5a (ENSTNIG00000015510)	tnfaip8l1 (ENSTNIG00000015511)	cope (ENSTNIG00000015512)	CERS1 (ENSTNIG00000015513)	ncln (ENSTNIG00000015514)	s1pr4 (ENSTNIG00000015515)	ENSTNIG00000015516	use1 (ENSTNIG00000015517)	insrb (ENSTNIG00000015518) #22	ARHGEF18 (ENSTNIG00000015519) #21	enc3 (ENSTNIG00000015520)	enc3 (ENSTNIG00000015521)	timm13 (ENSTNIG00000015522)	ENSTNIG00000015523	ENSTNIG00000015524	lsm7 (ENSTNIG00000015525)	ENSTNIG00000015526	cers4a (ENSTNIG00000015527)	fbn2b (ENSTNIG00000015528)	timm44 (ENSTNIG00000015529)	hnrnpm (ENSTNIG00000015530)	dmap1 (ENSTNIG00000015531)	guk1b (ENSTNIG00000015532)	ENSTNIG00000015533
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Ballan wrasse	MODERN SPECIES	122	ENSLBEG00000006166	ENSLBEG00000006112	lpl (ENSLBEG00000006041)	safb (ENSLBEG00000006015)	malt2 (ENSLBEG00000005954)	mrpl54 (ENSLBEG00000005935)	fam32a (ENSLBEG00000005913)	fh (ENSLBEG00000005899)	hdgfl2 (ENSLBEG00000005864)	ap3d1 (ENSLBEG00000005725)	cdc34a (ENSLBEG00000005657)	C2CD4C (ENSLBEG00000005647)	gna15.4 (ENSLBEG00000005634)	usf1l (ENSLBEG00000005586)	use1 (ENSLBEG00000005541)	insrb (ENSLBEG00000005467) #22	ARHGEF18 (ENSLBEG00000005402) #21	enc3 (ENSLBEG00000005380)	timm13 (ENSLBEG00000005369)	ENSLBEG00000005249	lsm7 (ENSLBEG00000005203)	ENSLBEG00000005177	cers4a (ENSLBEG00000005164)	fbn2b (ENSLBEG00000004782)	CTXN1 (ENSLBEG00000004660)	timm44 (ENSLBEG00000004604)	hnrnpm (ENSLBEG00000004545)	dmap1 (ENSLBEG00000004484)	RNF220 (ENSLBEG00000004468)	ENSLBEG00000004451	guk1b (ENSLBEG00000004423)
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p
Perciformes	ANCESTRAL SPECIES	8	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Cottioidei	ANCESTRAL SPECIES	5	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000181720	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Lumpfish	MODERN SPECIES	19	ENSCLMG00005006247	rx1 (ENSCLMG00005006225)	MATK (ENSCLMG00005005841)	ZFR2 (ENSCLMG00005005834)	ATCAY (ENSCLMG00005005829)	mibp (ENSCLMG00005005827)	loxl5a (ENSCLMG00005005798)	mydgf (ENSCLMG00005005796)	tnfaip8l1 (ENSCLMG00005005794)	cope (ENSCLMG00005005717)	CERS1 (ENSCLMG00005005714)	ncln (ENSCLMG00005005696)	s1pr4 (ENSCLMG00005005694)	MYO9B (ENSCLMG00005003085)	use1 (ENSCLMG00005002825)	insrb (ENSCLMG00005022671) #22	ENSCLMG00005022613	ENSCLMG00005022612	ARHGEF18 (ENSCLMG00005022606) #21	enc3 (ENSCLMG00005022601)	timm13 (ENSCLMG00005022600)	ENSCLMG00005022599	lsm7 (ENSCLMG00005022598)	ENSCLMG00005022596	cers4a (ENSCLMG00005022557)	fbn2b (ENSCLMG00005022553)	ENSCLMG00005022552	CTXN1 (ENSCLMG00005022551)	timm44 (ENSCLMG00005022460)	hnrnpm (ENSCLMG00005022453)	dmap1 (ENSCLMG00005022452)
Stickleback	MODERN SPECIES	8	rx1 (ENSGACG00000010707)	MATK (ENSGACG00000010666)	ZFR2 (ENSGACG00000010658)	ATCAY (ENSGACG00000010652)	mibp (ENSGACG00000010621)	loxl5a (ENSGACG00000010616)	mydgf (ENSGACG00000010612)	ENSGACG00000010610	tnfaip8l1 (ENSGACG00000010593)	cope (ENSGACG00000010568)	CERS1 (ENSGACG00000010560)	ncln (ENSGACG00000010528)	s1pr4 (ENSGACG00000010526)	MYO9B (ENSGACG00000010494)	use1 (ENSGACG00000010489)	insrb (ENSGACG00000010475) #22	ARHGEF18 (ENSGACG00000010468) #21	ENSGACG00000010465	enc3 (ENSGACG00000010425)	timm13 (ENSGACG00000010398)	ENSGACG00000010394	lsm7 (ENSGACG00000010390)	cers4a (ENSGACG00000010353)	fbn2b (ENSGACG00000010321)	CTXN1 (ENSGACG00000010319)	timm44 (ENSGACG00000010289)	hnrnpm (ENSGACG00000010265)	dmap1 (ENSGACG00000010250)	RNF220 (ENSGACG00000010240)	guk1b (ENSGACG00000010211)	ENSGACG00000010184
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000177117	ENSGT00940000168428.b.a
Channel bull blenny	MODERN SPECIES	18	ZFR2 (ENSCGOG00000006156)	ENSCGOG00000006182	ATCAY (ENSCGOG00000006185)	mibp (ENSCGOG00000006192)	loxl5a (ENSCGOG00000006243)	ENSCGOG00000006246	ENSCGOG00000006248	ENSCGOG00000006249	mydgf (ENSCGOG00000006251)	tnfaip8l1 (ENSCGOG00000006254)	cope (ENSCGOG00000006264)	ENSCGOG00000006455	s1pr4 (ENSCGOG00000006459)	MYO9B (ENSCGOG00000006491)	use1 (ENSCGOG00000007697)	insrb (ENSCGOG00000007810) #22	ARHGEF18 (ENSCGOG00000012239) #21	enc3 (ENSCGOG00000012243)	timm13 (ENSCGOG00000012245)	ENSCGOG00000012252	ENSCGOG00000012254	lsm7 (ENSCGOG00000012255)	ENSCGOG00000012261	cers4a (ENSCGOG00000012265)	fbn2b (ENSCGOG00000012309)	CTXN1 (ENSCGOG00000012568)	timm44 (ENSCGOG00000012571)	hnrnpm (ENSCGOG00000012800)	dmap1 (ENSCGOG00000012828)	RNF220 (ENSCGOG00000012976)	guk1b (ENSCGOG00000012984)
Pike perch	MODERN SPECIES	21	rx1 (ENSSLUG00000012435)	MATK (ENSSLUG00000012459)	ZFR2 (ENSSLUG00000012779)	ATCAY (ENSSLUG00000012868)	mibp (ENSSLUG00000012877)	loxl5a (ENSSLUG00000012884)	mydgf (ENSSLUG00000012887)	tnfaip8l1 (ENSSLUG00000012891)	cope (ENSSLUG00000012899)	CERS1 (ENSSLUG00000012920)	ncln (ENSSLUG00000012944)	CERS1 (ENSSLUG00000012985)	s1pr4 (ENSSLUG00000012993)	MYO9B (ENSSLUG00000013040)	use1 (ENSSLUG00000014764)	insrb (ENSSLUG00000014921) #22	ENSSLUG00000018641	ARHGEF18 (ENSSLUG00000018655) #21	enc3 (ENSSLUG00000018691)	timm13 (ENSSLUG00000018699)	ENSSLUG00000018716	lsm7 (ENSSLUG00000018783)	cers4a (ENSSLUG00000018794)	fbn2b (ENSSLUG00000018814)	CTXN1 (ENSSLUG00000018874)	timm44 (ENSSLUG00000018913)	hnrnpm (ENSSLUG00000019376)	dmap1 (ENSSLUG00000019394)	RNF220 (ENSSLUG00000019397)	guk1b (ENSSLUG00000019400)	ENSSLUG00000019405
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000154756.B.v
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000154756.B.v
European seabass	MODERN SPECIES	17	ENSDLAG00005019944	rx1 (ENSDLAG00005034047)	MATK (ENSDLAG00005018909)	ENSDLAG00005018828	ATCAY (ENSDLAG00005032179)	mibp (ENSDLAG00005018798)	loxl5a (ENSDLAG00005018726)	mydgf (ENSDLAG00005018703)	tnfaip8l1 (ENSDLAG00005030047)	ENSDLAG00005018560	ENSDLAG00005030951	ncln (ENSDLAG00005030273)	s1pr4 (ENSDLAG00005018036)	ENSDLAG00005014930	use1 (ENSDLAG00005028648)	insrb (ENSDLAG00005009460) #22	ENSDLAG00005009327 #21	enc3 (ENSDLAG00005009313)	timm13 (ENSDLAG00005028836)	ENSDLAG00005027045	ENSDLAG00005009280	cers4a (ENSDLAG00005034667)	ENSDLAG00005008432	ENSDLAG00005027887	timm44 (ENSDLAG00005007613)	ENSDLAG00005007457	dmap1 (ENSDLAG00005007370)	ENSDLAG00005007340	guk1b (ENSDLAG00005007285)	ENSDLAG00005029309	zgc:153738 (ENSDLAG00005007126)
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005018596	rx1 (ENSLCRG00005018617)	MATK (ENSLCRG00005018619)	ZFR2 (ENSLCRG00005019038)	ATCAY (ENSLCRG00005019042)	mibp (ENSLCRG00005019049)	loxl5a (ENSLCRG00005019052)	mydgf (ENSLCRG00005019055)	tnfaip8l1 (ENSLCRG00005019057)	cope (ENSLCRG00005019064)	CERS1 (ENSLCRG00005019135)	ncln (ENSLCRG00005019137)	s1pr4 (ENSLCRG00005019151)	MYO9B (ENSLCRG00005019165)	use1 (ENSLCRG00005019347)	insrb (ENSLCRG00005019382) #22	ENSLCRG00005021038 #21	enc3 (ENSLCRG00005021039)	timm13 (ENSLCRG00005021040)	ENSLCRG00005021042	ENSLCRG00005021045	lsm7 (ENSLCRG00005021046)	ENSLCRG00005021047	cers4a (ENSLCRG00005021048)	fbn2b (ENSLCRG00005021077)	ENSLCRG00005021155	timm44 (ENSLCRG00005021177)	hnrnpm (ENSLCRG00005021403)	dmap1 (ENSLCRG00005021418)	RNF220 (ENSLCRG00005021424)	guk1b (ENSLCRG00005021430)
Gilthead seabream	MODERN SPECIES	2	haus5 (ENSSAUG00010026062)	ENSSAUG00010026064	rx1 (ENSSAUG00010026071)	MATK (ENSSAUG00010026078)	ZFR2 (ENSSAUG00010026100)	ATCAY (ENSSAUG00010026102)	mibp (ENSSAUG00010026103)	loxl5a (ENSSAUG00010026104)	mydgf (ENSSAUG00010026106)	tnfaip8l1 (ENSSAUG00010026107)	cope (ENSSAUG00010026111)	CERS1 (ENSSAUG00010026113)	ncln (ENSSAUG00010026120)	MYO9B (ENSSAUG00010026277)	use1 (ENSSAUG00010026460)	insrb (ENSSAUG00010026476) #22	ARHGEF18 (ENSSAUG00010026833) #21	enc3 (ENSSAUG00010026838)	Tim13 (ENSSAUG00010026842)	ENSSAUG00010026847	lsm7 (ENSSAUG00010026851)	ENSSAUG00010026852	cers4a (ENSSAUG00010026854)	fbn2b (ENSSAUG00010026868)	CTXN1 (ENSSAUG00010026890)	timm44 (ENSSAUG00010026893)	hnrnpm (ENSSAUG00010026894)	dmap1 (ENSSAUG00010026902)	RNF220 (ENSSAUG00010026908)	guk1b (ENSSAUG00010026920)	ENSSAUG00010026930
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000168181
Anabantaria	ANCESTRAL SPECIES	7	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000154756.B.v	ENSGT00940000177273
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000177273	ENSGT00940000168428.b.a
Climbing perch	MODERN SPECIES	17	ENSATEG00000007577	rx1 (ENSATEG00000007635)	MATK (ENSATEG00000007657)	ENSATEG00000007722	ATCAY (ENSATEG00000007736)	mibp (ENSATEG00000007841)	loxl5a (ENSATEG00000007879)	mydgf (ENSATEG00000027535)	tnfaip8l1 (ENSATEG00000007914)	ENSATEG00000007929	ENSATEG00000007989	ncln (ENSATEG00000008012)	s1pr4 (ENSATEG00000008095)	ENSATEG00000008105	use1 (ENSATEG00000008250)	insrb (ENSATEG00000008275) #22	ENSATEG00000008386 #21	enc3 (ENSATEG00000008432)	timm13 (ENSATEG00000029496)	ENSATEG00000008476	lsm7 (ENSATEG00000026156)	ENSATEG00000027293	cers4a (ENSATEG00000008600)	ENSATEG00000027515	ENSATEG00000008621	ENSATEG00000008845	timm44 (ENSATEG00000008853)	ENSATEG00000008976	dmap1 (ENSATEG00000009145)	ENSATEG00000009183	guk1b (ENSATEG00000009187)
Siamese fighting fish	MODERN SPECIES	15	haus5 (ENSBSLG00000003657)	rx1 (ENSBSLG00000003704)	MATK (ENSBSLG00000003990)	ZFR2 (ENSBSLG00000004412)	ATCAY (ENSBSLG00000004420)	mibp (ENSBSLG00000004430)	loxl5a (ENSBSLG00000004761)	mydgf (ENSBSLG00000004784)	tnfaip8l1 (ENSBSLG00000004816)	cope (ENSBSLG00000004968)	CERS1 (ENSBSLG00000005634)	ncln (ENSBSLG00000005664)	s1pr4 (ENSBSLG00000005801)	MYO9B (ENSBSLG00000006954)	use1 (ENSBSLG00000008645)	insrb (ENSBSLG00000008798) #22	ARHGEF18 (ENSBSLG00000015047) #21	enc3 (ENSBSLG00000015153)	timm13 (ENSBSLG00000015179)	ENSBSLG00000015212	lsm7 (ENSBSLG00000015283)	cers4a (ENSBSLG00000015343)	CTXN1 (ENSBSLG00000016020)	timm44 (ENSBSLG00000016038)	hnrnpm (ENSBSLG00000016324)	dmap1 (ENSBSLG00000016340)	dmap1 (ENSBSLG00000016354)	RNF220 (ENSBSLG00000016358)	guk1b (ENSBSLG00000016365)	ENSBSLG00000016374	ENSBSLG00000016380
Zig-zag eel	MODERN SPECIES	18	ENSMAMG00000004858	rx1 (ENSMAMG00000025789)	MATK (ENSMAMG00000004909)	ENSMAMG00000004951	ATCAY (ENSMAMG00000024775)	mibp (ENSMAMG00000004982)	loxl5a (ENSMAMG00000005002)	mydgf (ENSMAMG00000005019)	tnfaip8l1 (ENSMAMG00000026836)	ENSMAMG00000005043	ENSMAMG00000005082	ncln (ENSMAMG00000005097)	s1pr4 (ENSMAMG00000005150)	ENSMAMG00000005167	use1 (ENSMAMG00000005262)	insrb (ENSMAMG00000005288) #22	ENSMAMG00000005328 #21	enc3 (ENSMAMG00000005355)	timm13 (ENSMAMG00000026432)	ENSMAMG00000005370	lsm7 (ENSMAMG00000005410)	ENSMAMG00000005414	cers4a (ENSMAMG00000005432)	ENSMAMG00000005472	ENSMAMG00000005576	timm44 (ENSMAMG00000005591)	ENSMAMG00000005612	dmap1 (ENSMAMG00000005629)	ENSMAMG00000005640	guk1b (ENSMAMG00000005650)	ENSMAMG00000024567
Carangaria	ANCESTRAL SPECIES	7	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000168181
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Barramundi perch	MODERN SPECIES	43	sin3b (ENSLCAG00010025277)	ENSLCAG00010025164	MATK (ENSLCAG00010025123)	ZFR2 (ENSLCAG00010025113)	ATCAY (ENSLCAG00010025107)	mibp (ENSLCAG00010025100)	loxl5a (ENSLCAG00010025096)	mydgf (ENSLCAG00010025091)	tnfaip8l1 (ENSLCAG00010025088)	cope (ENSLCAG00010025076)	CERS1 (ENSLCAG00010025066)	ncln (ENSLCAG00010025034)	s1pr4 (ENSLCAG00010025015)	MYO9B (ENSLCAG00010024751)	use1 (ENSLCAG00010024635)	insrb (ENSLCAG00010024130) #22	ARHGEF18 (ENSLCAG00010023913) #21	enc3 (ENSLCAG00010023905)	timm13 (ENSLCAG00010023902)	ENSLCAG00010023898	ENSLCAG00010023891	lsm7 (ENSLCAG00010023883)	ENSLCAG00010023879	cers4a (ENSLCAG00010023874)	fbn2b (ENSLCAG00010023593)	CTXN1 (ENSLCAG00010023508)	timm44 (ENSLCAG00010023382)	hnrnpm (ENSLCAG00010023305)	dmap1 (ENSLCAG00010023299)	RNF220 (ENSLCAG00010023298)	guk1b (ENSLCAG00010023296)
Seriola	ANCESTRAL SPECIES		ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000163715.b	ENSGT01030000234515.a.b.b.a	ENSGT00950000183158.A	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421
Greater amberjack	MODERN SPECIES		ENSSDUG00000000862	rx1 (ENSSDUG00000000875)	MATK (ENSSDUG00000000901)	ENSSDUG00000000962	ATCAY (ENSSDUG00000000987)	mibp (ENSSDUG00000001058)	loxl5a (ENSSDUG00000001113)	mydgf (ENSSDUG00000001272)	tnfaip8l1 (ENSSDUG00000001302)	cope (ENSSDUG00000001320)	CERS1 (ENSSDUG00000001367)	ncln (ENSSDUG00000001384)	s1pr4 (ENSSDUG00000001452)	MYO9B (ENSSDUG00000001469)	use1 (ENSSDUG00000001559)	insrb (ENSSDUG00000001593) #22	ARHGEF18 (ENSSDUG00000001719) #21	enc3 (ENSSDUG00000001809)	timm13 (ENSSDUG00000001818)	ENSSDUG00000001835	lsm7 (ENSSDUG00000001863)	ENSSDUG00000001881	cers4a (ENSSDUG00000001904)	fbn2b (ENSSDUG00000001962)	CTXN1 (ENSSDUG00000002111)	ENSSDUG00000002122	timm44 (ENSSDUG00000002132)	hnrnpm (ENSSDUG00000002188)	dmap1 (ENSSDUG00000002281)	RNF220 (ENSSDUG00000002315)	guk1b (ENSSDUG00000002345)
Yellowtail amberjack	MODERN SPECIES	2246	ENSSLDG00000015631	rx1 (ENSSLDG00000015670)	MATK (ENSSLDG00000015693)	ZFR2 (ENSSLDG00000015732)	ATCAY (ENSSLDG00000015767)	mibp (ENSSLDG00000015793)	loxl5a (ENSSLDG00000015828)	mydgf (ENSSLDG00000015838)	tnfaip8l1 (ENSSLDG00000015851)	cope (ENSSLDG00000015863)	CERS1 (ENSSLDG00000015902)	ncln (ENSSLDG00000015927)	s1pr4 (ENSSLDG00000016017)	ENSSLDG00000016034	use1 (ENSSLDG00000016051)	insrb (ENSSLDG00000016088) #22	ARHGEF18 (ENSSLDG00000016133) #21	enc3 (ENSSLDG00000016197)	ENSSLDG00000016245	timm13 (ENSSLDG00000016325)	lsm7 (ENSSLDG00000016339)	ENSSLDG00000016352	cers4a (ENSSLDG00000016360)	fbn2b (ENSSLDG00000016403)	CTXN1 (ENSSLDG00000016545)	timm44 (ENSSLDG00000016573)	hnrnpm (ENSSLDG00000016713)	dmap1 (ENSSLDG00000016882)	RNF220 (ENSSLDG00000016933)	ENSSLDG00000016966	guk1b (ENSSLDG00000016977)
Pleuronectoidei	ANCESTRAL SPECIES	30	ENSGT00950000183104.B.a.b.a.b	ENSGT00940000163917.a.a	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364.b	ENSGT00940000165007.b	ENSGT00940000154779.a.a.d	ENSGT00390000000777	ENSGT00390000003488.a.b.a	ENSGT00390000003478	ENSGT01030000234515.b	ENSGT00500000044945.a	ENSGT01050000244887.B	ENSGT00940000156845	ENSGT00390000014361	ENSGT00940000155404.i.b #22	ENSGT00940000157375.c #21	ENSGT00950000182983.B.a.a	ENSGT00390000014000	ENSGT00940000159993	ENSGT00510000047872	ENSGT00940000155273	ENSGT01030000234515.a.b.b.a	ENSGT00940000154412.C.c.b	ENSGT00390000000051.a	ENSGT00940000154595	ENSGT00390000016466	ENSGT00390000016573.c.a	ENSGT00940000155815.p	ENSGT00940000167421	ENSGT00940000168428.b.a
Tongue sole	MODERN SPECIES	11	ENSCSEG00000013973	rx1 (ENSCSEG00000013987)	MATK (ENSCSEG00000013992)	ZFR2 (ENSCSEG00000013995)	ATCAY (ENSCSEG00000014013)	mibp (ENSCSEG00000014027)	loxl5a (ENSCSEG00000014044)	mydgf (ENSCSEG00000014049)	tnfaip8l1 (ENSCSEG00000014057)	cope (ENSCSEG00000014066)	CERS1 (ENSCSEG00000014081)	ncln (ENSCSEG00000014102)	s1pr4 (ENSCSEG00000014130)	ENSCSEG00000014133	use1 (ENSCSEG00000014138)	insrb (ENSCSEG00000014148) #22	ENSCSEG00000014175 #21	ENSCSEG00000014205	psmd1 (ENSCSEG00000014215)	htr2b (ENSCSEG00000014247)	her6 (ENSCSEG00000014253)	opa1 (ENSCSEG00000014266)	ATP13A3 (ENSCSEG00000014315)	ENSCSEG00000014356	SLC44A5 (ENSCSEG00000014391)	ENSCSEG00000014474	erich3 (ENSCSEG00000014496)	ENSCSEG00000014522	tnni3k (ENSCSEG00000014533)	fpgt (ENSCSEG00000014568)	acot11b (ENSCSEG00000014584)
Turbot	MODERN SPECIES	3	ENSSMAG00000005482	rx1 (ENSSMAG00000033028)	MATK (ENSSMAG00000005461)	ENSSMAG00000005377	ATCAY (ENSSMAG00000005319)	mibp (ENSSMAG00000005298)	loxl5a (ENSSMAG00000005285)	mydgf (ENSSMAG00000005280)	tnfaip8l1 (ENSSMAG00000031021)	ENSSMAG00000005216	ENSSMAG00000005198	ncln (ENSSMAG00000005136)	s1pr4 (ENSSMAG00000005123)	ENSSMAG00000004758	use1 (ENSSMAG00000004710)	insrb (ENSSMAG00000004638) #22	ENSSMAG00000029449	ENSSMAG00000004408 #21	enc3 (ENSSMAG00000004360)	timm13 (ENSSMAG00000004298)	ENSSMAG00000004210	lsm7 (ENSSMAG00000004195)	ENSSMAG00000004184	ENSSMAG00000004045	ENSSMAG00000022554	ENSSMAG00000004030	ENSSMAG00000003992	dmap1 (ENSSMAG00000003952)	ENSSMAG00000003948	ENSSMAG00000003928	guk1b (ENSSMAG00000003901)
Tiger tail seahorse	MODERN SPECIES	292																insrb (ENSHCOG00000020384) #22	ARHGEF18 (ENSHCOG00000000620) #21	enc3 (ENSHCOG00000020311)	timm13 (ENSHCOG00000020307)	ENSHCOG00000000540	lsm7 (ENSHCOG00000020252)	ENSHCOG00000020250	cers4a (ENSHCOG00000020233)	ENSHCOG00000020203	fbn2b (ENSHCOG00000020189)	CTXN1 (ENSHCOG00000020089)	timm44 (ENSHCOG00000020071)	hnrnpm (ENSHCOG00000019984)	dmap1 (ENSHCOG00000019899)	ENSHCOG00000019873	guk1b (ENSHCOG00000019863)
Pinecone sodierfish	MODERN SPECIES	18	rx1 (ENSMMDG00005005024)	MATK (ENSMMDG00005005034)	ZFR2 (ENSMMDG00005005052)	ATCAY (ENSMMDG00005005063)	mibp (ENSMMDG00005005145)	loxl5a (ENSMMDG00005005162)	mydgf (ENSMMDG00005005721)	tnfaip8l1 (ENSMMDG00005005726)	cope (ENSMMDG00005005736)	CERS1 (ENSMMDG00005005838)	ENSMMDG00005005846	ncln (ENSMMDG00005005859)	s1pr4 (ENSMMDG00005005872)	MYO9B (ENSMMDG00005006005)	use1 (ENSMMDG00005010388)	insrb (ENSMMDG00005010402) #22	ARHGEF18 (ENSMMDG00005010427) #21	enc3 (ENSMMDG00005010431)	timm13 (ENSMMDG00005010433)	ENSMMDG00005010439	lsm7 (ENSMMDG00005010441)	cers4a (ENSMMDG00005010450)	fbn2b (ENSMMDG00005010538)	CTXN1 (ENSMMDG00005011180)	timm44 (ENSMMDG00005011188)	hnrnpm (ENSMMDG00005011253)	ENSMMDG00005011283	marchf2 (ENSMMDG00005011285)	ENSMMDG00005011287	PIP5K1C (ENSMMDG00005011290)	ENSMMDG00005011292
Cod	MODERN SPECIES	3	ENSGMOG00000013649	ENSGMOG00000013619	rx1 (ENSGMOG00000013612)	ENSGMOG00000013588	ENSGMOG00000013573	mibp (ENSGMOG00000013566)	loxl5a (ENSGMOG00000013541)	ENSGMOG00000026102	tnfaip8l1 (ENSGMOG00000013529)	ENSGMOG00000013512	ENSGMOG00000013496	ncln (ENSGMOG00000013479)	s1pr4 (ENSGMOG00000013478)	ENSGMOG00000013427	use1 (ENSGMOG00000013419)	insrb (ENSGMOG00000013387) #22	ENSGMOG00000013360 #21	enc3 (ENSGMOG00000013346)	timm13 (ENSGMOG00000025635)	ENSGMOG00000034913	lsm7 (ENSGMOG00000024901)	ENSGMOG00000035622	fbn2b (ENSGMOG00000009755)	ENSGMOG00000019896	ENSGMOG00000023674	timm44 (ENSGMOG00000009739)	ENSGMOG00000009724	ENSGMOG00000024419	ENSGMOG00000009668	ENSGMOG00000007379	ENSGMOG00000007390
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155404.j #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155404.j #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155404.j #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000155404.j #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000155404.j #22
Characoidei	ANCESTRAL SPECIES																	ENSGT00940000155404.j #22
Red-bellied piranha	MODERN SPECIES	1278																ENSPNAG00000025154 #22	MYADM (ENSPNAG00000003888)	ENSPNAG00000025263	ENSPNAG00000005564