Bilateria ANCESTRAL SPECIES ENSGT00940000156736 #22 Chordata ANCESTRAL SPECIES ENSGT00940000156736 #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000156736 #22 Gnathostomata ANCESTRAL SPECIES 22 ENSGT00390000004511 ENSGT00510000049555 ENSGT01030000234607.A.a.b.b ENSGT00940000154078.b ENSGT00940000156888 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000160001 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00390000015298 ENSGT00940000159322 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00530000063371.A #29 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 Euteleostomi ANCESTRAL SPECIES ENSGT00940000155588.a ENSGT00950000183109.d ENSGT00950000185665 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Sarcopterygii ANCESTRAL SPECIES 146 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 Tetrapoda ANCESTRAL SPECIES 3 ENSGT00940000156114 ENSGT00940000161244 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Amniota ANCESTRAL SPECIES 2 ENSGT00940000156114 ENSGT00940000161244 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Mammalia ANCESTRAL SPECIES 1 ENSGT00940000156114 ENSGT00940000161244 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Theria ANCESTRAL SPECIES 6 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00510000047107.B ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Eutheria ANCESTRAL SPECIES 2 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Primates ANCESTRAL SPECIES 10 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Haplorrhini ANCESTRAL SPECIES 23 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Simiiformes ANCESTRAL SPECIES 10 ENSGT01100000263507.D.a.a.a.b.a.b ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Catarrhini ANCESTRAL SPECIES 14 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00940000171094 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 Hominoidea ANCESTRAL SPECIES 10 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00940000171094 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00910000148485 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.i #34 Hominidae ANCESTRAL SPECIES 12 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00910000148485 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.i #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00910000148485 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.i #34 Homo/Pan group ANCESTRAL SPECIES 10 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00910000148485 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.i #34 Human MODERN SPECIES 16 ZNF141 (ENSG00000131127) #7 ZNF721 (ENSG00000182903) #8 PIGG (ENSG00000174227) #9 TMEM271 (ENSG00000273238) #10 PDE6B (ENSG00000133256) #11 ATP5ME (ENSG00000169020) #12 MYL5 (ENSG00000215375) #13 SLC49A3 (ENSG00000169026) #14 PCGF3 (ENSG00000185619) #15 CPLX1 (ENSG00000168993) #16 GAK (ENSG00000178950) #17 TMEM175 (ENSG00000127419) #18 DGKQ (ENSG00000145214) #19 SLC26A1 (ENSG00000145217) #20 IDUA (ENSG00000127415) #21 FGFRL1 (ENSG00000127418) #22 RNF212 (ENSG00000178222) #23 SPON2 (ENSG00000159674) #24 CTBP1 (ENSG00000159692) #25 MAEA (ENSG00000090316) #26 UVSSA (ENSG00000163945) #27 NKX1-1 (ENSG00000235608) #28 FAM53A (ENSG00000174137) #29 SLBP (ENSG00000163950) #30 TACC3 (ENSG00000013810) #31 TMEM129 (ENSG00000168936) #32 FGFR3 (ENSG00000068078) #33 LETM1 (ENSG00000168924) #34 NSD2 (ENSG00000109685) #35 NELFA (ENSG00000185049) #36 C4orf48 (ENSG00000243449) #37 Pan ANCESTRAL SPECIES 7 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00910000148485 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.i #34 Chimpanzee MODERN SPECIES 17 ZNF721 (ENSPTRG00000043780) #8 PIGG (ENSPTRG00000015806) #9 TMEM271 (ENSPTRG00000051837) #10 ENSPTRG00000046026 #11 ATP5ME (ENSPTRG00000015809) #12 MYL5 (ENSPTRG00000033963) #13 SLC49A3 (ENSPTRG00000015812) #14 PCGF3 (ENSPTRG00000046521) #15 ENSPTRG00000047070 CPLX1 (ENSPTRG00000046897) #16 GAK (ENSPTRG00000015815) #17 TMEM175 (ENSPTRG00000050831) #18 DGKQ (ENSPTRG00000047042) #19 SLC26A1 (ENSPTRG00000015818) #20 IDUA (ENSPTRG00000015819) #21 FGFRL1 (ENSPTRG00000049998) #22 RNF212 (ENSPTRG00000015822) #23 ENSPTRG00000045674 SPON2 (ENSPTRG00000015825) #24 CTBP1 (ENSPTRG00000015827) #25 ENSPTRG00000049092 MAEA (ENSPTRG00000015829) #26 UVSSA (ENSPTRG00000015830) #27 NKX1-1 (ENSPTRG00000041220) #28 FAM53A (ENSPTRG00000015831) #29 SLBP (ENSPTRG00000015832) #30 TMEM129 (ENSPTRG00000015833) #32 TACC3 (ENSPTRG00000015834) #31 FGFR3 (ENSPTRG00000015836) #33 LETM1 (ENSPTRG00000015837) #34 NSD2 (ENSPTRG00000015838) #35 Bonobo MODERN SPECIES 17 ENSPPAG00000013822 ENSPPAG00000023197 ENSPPAG00000028303 PIGG (ENSPPAG00000029325) #9 PDE6B (ENSPPAG00000037791) #11 ATP5ME (ENSPPAG00000038486) #12 MYL5 (ENSPPAG00000039203) #13 SLC49A3 (ENSPPAG00000040732) #14 PCGF3 (ENSPPAG00000029073) #15 CPLX1 (ENSPPAG00000034976) #16 GAK (ENSPPAG00000030635) #17 TMEM175 (ENSPPAG00000001209) #18 DGKQ (ENSPPAG00000037911) #19 SLC26A1 (ENSPPAG00000034145) #20 IDUA (ENSPPAG00000032304) #21 FGFRL1 (ENSPPAG00000033720) #22 RNF212 (ENSPPAG00000043537) #23 ENSPPAG00000033770 SPON2 (ENSPPAG00000038791) #24 CTBP1 (ENSPPAG00000032870) #25 ENSPPAG00000016070 ENSPPAG00000017524 #26 UVSSA (ENSPPAG00000039158) #27 FAM53A (ENSPPAG00000001687) #29 SLBP (ENSPPAG00000033300) #30 TMEM129 (ENSPPAG00000032640) #32 TACC3 (ENSPPAG00000041213) #31 ENSPPAG00000039682 FGFR3 (ENSPPAG00000034154) #33 LETM1 (ENSPPAG00000022259) #34 NSD2 (ENSPPAG00000028888) #35 Gorilla MODERN SPECIES 17 ZNF732 (ENSGGOG00000016311) ##7 ENSGGOG00000010200 ENSGGOG00000043251 PIGG (ENSGGOG00000014194) #9 PDE6B (ENSGGOG00000005730) #11 ATP5ME (ENSGGOG00000005741) #12 MYL5 (ENSGGOG00000005743) #13 SLC49A3 (ENSGGOG00000005750) #14 PCGF3 (ENSGGOG00000008926) #15 CPLX1 (ENSGGOG00000002173) #16 GAK (ENSGGOG00000000740) #17 TMEM175 (ENSGGOG00000010287) #18 DGKQ (ENSGGOG00000010295) #19 SLC26A1 (ENSGGOG00000010333) #20 IDUA (ENSGGOG00000010322) #21 FGFRL1 (ENSGGOG00000010340) #22 RNF212 (ENSGGOG00000023243) #23 ENSGGOG00000007686 SPON2 (ENSGGOG00000002707) #24 CTBP1 (ENSGGOG00000010541) #25 ENSGGOG00000036321 MAEA (ENSGGOG00000004866) #26 UVSSA (ENSGGOG00000004872) #27 FAM53A (ENSGGOG00000003163) #29 SLBP (ENSGGOG00000003167) #30 TMEM129 (ENSGGOG00000039598) #32 TACC3 (ENSGGOG00000041158) #31 FGFR3 (ENSGGOG00000015081) #33 LETM1 (ENSGGOG00000002923) #34 NSD2 (ENSGGOG00000014144) #35 NELFA (ENSGGOG00000014161) #36 Orangutan MODERN SPECIES 17 PIGG (ENSPPYG00000014503) #9 TMEM271 (ENSPPYG00000039837) #10 PDE6B (ENSPPYG00000014504) #11 ATP5ME (ENSPPYG00000014505) #12 MYL5 (ENSPPYG00000014506) #13 ENSPPYG00000014507 #14 PCGF3 (ENSPPYG00000014508) #15 ENSPPYG00000035510 ENSPPYG00000036333 CPLX1 (ENSPPYG00000014510) #16 GAK (ENSPPYG00000014511) #17 TMEM175 (ENSPPYG00000014512) #18 DGKQ (ENSPPYG00000014513) #19 IDUA (ENSPPYG00000014514) #21 SLC26A1 (ENSPPYG00000014515) #20 FGFRL1 (ENSPPYG00000040964) #22 ENSPPYG00000014517 #23 ENSPPYG00000014518 SPON2 (ENSPPYG00000014522) #24 CTBP1 (ENSPPYG00000014524) #25 ENSPPYG00000038782 MAEA (ENSPPYG00000014525) #26 UVSSA (ENSPPYG00000014526) #27 NKX1-1 (ENSPPYG00000041138) #28 FAM53A (ENSPPYG00000014528) #29 ENSPPYG00000014529 #30 TMEM129 (ENSPPYG00000014530) #32 TACC3 (ENSPPYG00000014531) #31 FGFR3 (ENSPPYG00000014532) #33 LETM1 (ENSPPYG00000014533) #34 NSD2 (ENSPPYG00000014534) #35 Gibbon MODERN SPECIES 12 ENSNLEG00000029198 ENSNLEG00000029974 PIGG (ENSNLEG00000000824) #9 PDE6B (ENSNLEG00000000873) #11 ATP5ME (ENSNLEG00000000887) #12 MYL5 (ENSNLEG00000000896) #13 SLC49A3 (ENSNLEG00000000906) #14 PCGF3 (ENSNLEG00000029361) #15 ENSNLEG00000035262 ##16 GAK (ENSNLEG00000000955) #17 ENSNLEG00000034632 ENSNLEG00000030422 #18 ENSNLEG00000000967 #19 SLC26A1 (ENSNLEG00000000982) #20 IDUA (ENSNLEG00000000973) #21 ENSNLEG00000000991 #22 ENSNLEG00000000998 ENSNLEG00000035394 SPON2 (ENSNLEG00000001006) #24 CTBP1 (ENSNLEG00000001055) #25 MAEA (ENSNLEG00000001060) #26 UVSSA (ENSNLEG00000001082) #27 ENSNLEG00000001097 FAM53A (ENSNLEG00000000044) #29 SLBP (ENSNLEG00000000048) #30 ENSNLEG00000034209 #32 ENSNLEG00000035802 TACC3 (ENSNLEG00000000057) #31 ENSNLEG00000000063 #33 LETM1 (ENSNLEG00000000067) #34 NSD2 (ENSNLEG00000000081) #35 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00940000171094 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00910000146990 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 Rhinopithecus ANCESTRAL SPECIES 181 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00940000171094 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000165250 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00910000147922 ENSGT00940000153203.B #26 ENSGT00910000146990 ENSGT00390000000377 #27 ENSGT00940000162861 #28 Golden snub-nosed monkey MODERN SPECIES 1838 ZNF721 (ENSRROG00000035252) #8 PIGG (ENSRROG00000032304) #9 PDE6B (ENSRROG00000042875) #11 ATP5ME (ENSRROG00000041404) #12 MYL5 (ENSRROG00000036771) #13 SLC49A3 (ENSRROG00000029646) #14 PCGF3 (ENSRROG00000017592) #15 ENSRROG00000039085 CPLX1 (ENSRROG00000024680) #16 GAK (ENSRROG00000042256) #17 TMEM175 (ENSRROG00000031594) #18 ENSRROG00000039301 DGKQ (ENSRROG00000030506) #19 IDUA (ENSRROG00000039860) #21 SLC26A1 (ENSRROG00000030234) #20 FGFRL1 (ENSRROG00000024356) #22 RNF212 (ENSRROG00000044770) #23 ENSRROG00000039129 SPON2 (ENSRROG00000034807) #24 CTBP1 (ENSRROG00000045399) #25 MAEA (ENSRROG00000043340) #26 UVSSA (ENSRROG00000029381) #27 ENSRROG00000040825 NKX1-1 (ENSRROG00000042105) #28 Black snub-nosed monkey MODERN SPECIES 2687 ENSRBIG00000044167 ENSRBIG00000010216 #8 PIGG (ENSRBIG00000011387) #9 PDE6B (ENSRBIG00000034185) #11 ATP5ME (ENSRBIG00000031478) #12 MYL5 (ENSRBIG00000040753) #13 SLC49A3 (ENSRBIG00000042154) #14 ENSRBIG00000005121 PCGF3 (ENSRBIG00000040742) #15 CPLX1 (ENSRBIG00000041533) #16 GAK (ENSRBIG00000030937) #17 TMEM175 (ENSRBIG00000037534) #18 DGKQ (ENSRBIG00000038577) #19 SLC26A1 (ENSRBIG00000012398) #20 IDUA (ENSRBIG00000033003) #21 FGFRL1 (ENSRBIG00000031813) #22 ENSRBIG00000032247 ENSRBIG00000035778 SPON2 (ENSRBIG00000038030) #24 ENSRBIG00000034912 CTBP1 (ENSRBIG00000028378) #25 ENSRBIG00000038685 MAEA (ENSRBIG00000041870) #26 ENSRBIG00000036334 UVSSA (ENSRBIG00000036016) #27 ENSRBIG00000019748 #28 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00910000146990 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 ENSGT00940000157429 #35 Vervet Monkey MODERN SPECIES 19 ZNF732 (ENSCSAG00000015124) ##7 ENSCSAG00000015131 ENSCSAG00000015132 #8 PIGG (ENSCSAG00000015139) #9 PDE6B (ENSCSAG00000015248) #11 ATP5ME (ENSCSAG00000015292) #12 MYL5 (ENSCSAG00000015296) #13 SLC49A3 (ENSCSAG00000015328) #14 PCGF3 (ENSCSAG00000015338) #15 CPLX1 (ENSCSAG00000015343) #16 GAK (ENSCSAG00000015357) #17 TMEM175 (ENSCSAG00000015363) #18 DGKQ (ENSCSAG00000015416) #19 SLC26A1 (ENSCSAG00000015468) #20 IDUA (ENSCSAG00000015497) #21 FGFRL1 (ENSCSAG00000015508) #22 RNF212 (ENSCSAG00000015539) #23 ENSCSAG00000015572 SPON2 (ENSCSAG00000015578) #24 CTBP1 (ENSCSAG00000015583) #25 MAEA (ENSCSAG00000015589) #26 UVSSA (ENSCSAG00000015594) #27 NKX1-1 (ENSCSAG00000015596) #28 FAM53A (ENSCSAG00000015598) #29 SLBP (ENSCSAG00000015628) #30 TMEM129 (ENSCSAG00000015634) #32 TACC3 (ENSCSAG00000015639) #31 FGFR3 (ENSCSAG00000015647) #33 LETM1 (ENSCSAG00000015656) #34 NSD2 (ENSCSAG00000015664) #35 NELFA (ENSCSAG00000015669) #36 Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00910000146990 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 ENSGT00940000157429 #35 Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00910000146990 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 ENSGT00940000157429 #35 Cercopithecinae_d ANCESTRAL SPECIES 85 ENSGT01100000263534.b.k.a.a.b.b.n #8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00960000188067 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00910000146990 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 ENSGT00940000157429 #35 Drill MODERN SPECIES 1719 ENSMLEG00000033518 ENSMLEG00000039746 PIGG (ENSMLEG00000015553) #9 PDE6B (ENSMLEG00000042624) #11 ATP5ME (ENSMLEG00000044292) #12 MYL5 (ENSMLEG00000004258) #13 SLC49A3 (ENSMLEG00000034109) #14 PCGF3 (ENSMLEG00000037300) #15 ENSMLEG00000002946 CPLX1 (ENSMLEG00000035595) #16 GAK (ENSMLEG00000043550) #17 TMEM175 (ENSMLEG00000014183) #18 DGKQ (ENSMLEG00000021202) #19 SLC26A1 (ENSMLEG00000037428) #20 IDUA (ENSMLEG00000040558) #21 FGFRL1 (ENSMLEG00000037900) #22 ENSMLEG00000028284 ENSMLEG00000032227 SPON2 (ENSMLEG00000002232) #24 CTBP1 (ENSMLEG00000030520) #25 MAEA (ENSMLEG00000039505) #26 ENSMLEG00000038826 UVSSA (ENSMLEG00000007158) #27 FAM53A (ENSMLEG00000035332) #29 SLBP (ENSMLEG00000024639) #30 TMEM129 (ENSMLEG00000040279) #32 TACC3 (ENSMLEG00000010263) #31 FGFR3 (ENSMLEG00000030618) #33 ENSMLEG00000040964 #34 NSD2 (ENSMLEG00000037492) #35 NELFA (ENSMLEG00000031010) #36 Sooty mangabey MODERN SPECIES 649 ZNF721 (ENSCATG00000042570) #8 PIGG (ENSCATG00000029671) #9 TMEM271 (ENSCATG00000005653) #10 PDE6B (ENSCATG00000037162) #11 ENSCATG00000025779 #12 MYL5 (ENSCATG00000033522) #13 SLC49A3 (ENSCATG00000039890) #14 PCGF3 (ENSCATG00000041209) #15 ENSCATG00000022057 CPLX1 (ENSCATG00000036140) #16 GAK (ENSCATG00000037531) #17 TMEM175 (ENSCATG00000042181) #18 DGKQ (ENSCATG00000038934) #19 SLC26A1 (ENSCATG00000014542) #20 IDUA (ENSCATG00000009650) #21 FGFRL1 (ENSCATG00000036121) #22 ENSCATG00000035612 ENSCATG00000044938 ENSCATG00000031977 SPON2 (ENSCATG00000036451) #24 CTBP1 (ENSCATG00000035745) #25 MAEA (ENSCATG00000019101) #26 ENSCATG00000041571 UVSSA (ENSCATG00000010984) #27 NKX1-1 (ENSCATG00000042002) #28 FAM53A (ENSCATG00000044777) #29 SLBP (ENSCATG00000029173) #30 TMEM129 (ENSCATG00000029726) #32 TACC3 (ENSCATG00000029112) #31 FGFR3 (ENSCATG00000033697) #33 ENSCATG00000042406 #34 Olive baboon MODERN SPECIES 13 ENSPANG00000030606 ##7 ENSPANG00000047832 ENSPANG00000042796 ENSPANG00000043759 PIGG (ENSPANG00000015129) #9 PDE6B (ENSPANG00000019722) #11 ATP5ME (ENSPANG00000008603) #12 MYL5 (ENSPANG00000011909) #13 SLC49A3 (ENSPANG00000008234) #14 PCGF3 (ENSPANG00000018511) #15 ENSPANG00000047577 #16 GAK (ENSPANG00000011910) #17 TMEM175 (ENSPANG00000020176) #18 ENSPANG00000016992 IDUA (ENSPANG00000007828) #21 FGFRL1 (ENSPANG00000040655) #22 RNF212 (ENSPANG00000011989) #23 SPON2 (ENSPANG00000013162) #24 CTBP1 (ENSPANG00000005494) #25 MAEA (ENSPANG00000024432) #26 UVSSA (ENSPANG00000019190) #27 NKX1-1 (ENSPANG00000035702) #28 FAM53A (ENSPANG00000020344) #29 SLBP (ENSPANG00000004932) #30 TMEM129 (ENSPANG00000005178) #32 TACC3 (ENSPANG00000007581) #31 FGFR3 (ENSPANG00000024533) #33 LETM1 (ENSPANG00000024554) #34 NSD2 (ENSPANG00000022789) #35 NELFA (ENSPANG00000019016) #36 ENSPANG00000029835 Macaca ANCESTRAL SPECIES 25 ENSGT00940000161765.B.a.b.b ##7 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000148273 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00910000146990 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 ENSGT00940000157429 #35 Pig-tailed macaque MODERN SPECIES 590 PIGG (ENSMNEG00000029870) #9 TMEM271 (ENSMNEG00000027966) #10 PDE6B (ENSMNEG00000045444) #11 ATP5ME (ENSMNEG00000038793) #12 MYL5 (ENSMNEG00000032847) #13 SLC49A3 (ENSMNEG00000042132) #14 PCGF3 (ENSMNEG00000042211) #15 ENSMNEG00000017739 ENSMNEG00000028048 CPLX1 (ENSMNEG00000040932) #16 GAK (ENSMNEG00000033046) #17 TMEM175 (ENSMNEG00000040356) #18 DGKQ (ENSMNEG00000033238) #19 SLC26A1 (ENSMNEG00000037199) #20 IDUA (ENSMNEG00000036273) #21 FGFRL1 (ENSMNEG00000028620) #22 ENSMNEG00000036883 #23 ENSMNEG00000042968 SPON2 (ENSMNEG00000034158) #24 CTBP1 (ENSMNEG00000037787) #25 MAEA (ENSMNEG00000028551) #26 UVSSA (ENSMNEG00000034877) #27 ENSMNEG00000027696 NKX1-1 (ENSMNEG00000036214) #28 FAM53A (ENSMNEG00000036030) #29 SLBP (ENSMNEG00000008082) #30 TMEM129 (ENSMNEG00000038437) #32 TACC3 (ENSMNEG00000041051) #31 FGFR3 (ENSMNEG00000043249) #33 ENSMNEG00000038507 #34 NSD2 (ENSMNEG00000030530) #35 Macaca_a ANCESTRAL SPECIES 12 ENSGT01030000234576.D.a.b.b.a.a.b.f.d.a ENSGT01100000263507.D.a.a.a.b.b.b ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00910000146990 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a.g #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Rhesus MODERN SPECIES 15 ENSMMUG00000047256 ENSMMUG00000039020 PIGG (ENSMMUG00000017457) #9 TMEM271 (ENSMMUG00000056562) #10 PDE6B (ENSMMUG00000003282) #11 ATP5ME (ENSMMUG00000044585) #12 MYL5 (ENSMMUG00000003285) #13 SLC49A3 (ENSMMUG00000003286) #14 PCGF3 (ENSMMUG00000012624) #15 CPLX1 (ENSMMUG00000005016) #16 GAK (ENSMMUG00000016919) #17 TMEM175 (ENSMMUG00000017221) #18 DGKQ (ENSMMUG00000017222) #19 IDUA (ENSMMUG00000057764) #21 SLC26A1 (ENSMMUG00000017223) #20 FGFRL1 (ENSMMUG00000032300) #22 RNF212 (ENSMMUG00000015507) #23 SPON2 (ENSMMUG00000020856) #24 CTBP1 (ENSMMUG00000008323) #25 MAEA (ENSMMUG00000008357) #26 UVSSA (ENSMMUG00000038497) #27 NKX1-1 (ENSMMUG00000051731) #28 FAM53A (ENSMMUG00000008363) #29 SLBP (ENSMMUG00000032303) #30 TMEM129 (ENSMMUG00000064450) #32 TACC3 (ENSMMUG00000011191) #31 FGFR3 (ENSMMUG00000019945) #33 LETM1 (ENSMMUG00000019948) #34 NSD2 (ENSMMUG00000046942) #35 NELFA (ENSMMUG00000009944) #36 ENSMMUG00000003234 Crab-eating macaque MODERN SPECIES 15 ENSMFAG00000058626 ENSMFAG00000037087 ENSMFAG00000032101 ENSMFAG00000037940 PIGG (ENSMFAG00000033335) #9 PDE6B (ENSMFAG00000039102) #11 ENSMFAG00000052778 #12 MYL5 (ENSMFAG00000043067) #13 SLC49A3 (ENSMFAG00000044152) #14 ENSMFAG00000055083 GAK (ENSMFAG00000043306) #17 TMEM175 (ENSMFAG00000041960) #18 DGKQ (ENSMFAG00000001042) #19 IDUA (ENSMFAG00000032030) #21 ENSMFAG00000039496 ENSMFAG00000002925 #22 RNF212 (ENSMFAG00000002719) #23 SPON2 (ENSMFAG00000050124) #24 CTBP1 (ENSMFAG00000000176) #25 MAEA (ENSMFAG00000001193) #26 UVSSA (ENSMFAG00000045124) #27 ENSMFAG00000030632 NKX1-1 (ENSMFAG00000002277) #28 FAM53A (ENSMFAG00000052796) #29 SLBP (ENSMFAG00000030130) #30 TMEM129 (ENSMFAG00000000493) #32 TACC3 (ENSMFAG00000043154) #31 FGFR3 (ENSMFAG00000032292) #33 LETM1 (ENSMFAG00000039886) #34 NSD2 (ENSMFAG00000031384) #35 NELFA (ENSMFAG00000035742) #36 Platyrrhini ANCESTRAL SPECIES 5 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342.j #36 Cebidae ANCESTRAL SPECIES 4 ENSGT01100000263507.D.a.a.a.b.a.b ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342.j #36 Cebidae_a ANCESTRAL SPECIES 34 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000014349.ib.b ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00910000147312 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342.j #36 Bolivian squirrel monkey MODERN SPECIES 108 ENSSBOG00000027323 PIGG (ENSSBOG00000028022) #9 PDE6B (ENSSBOG00000022384) #11 ENSSBOG00000024171 ATP5ME (ENSSBOG00000018677) #12 MYL5 (ENSSBOG00000026609) #13 SLC49A3 (ENSSBOG00000033389) #14 PCGF3 (ENSSBOG00000026564) #15 ENSSBOG00000028223 CPLX1 (ENSSBOG00000029506) #16 GAK (ENSSBOG00000026420) #17 TMEM175 (ENSSBOG00000023050) #18 DGKQ (ENSSBOG00000028901) #19 SLC26A1 (ENSSBOG00000030545) #20 IDUA (ENSSBOG00000024010) #21 FGFRL1 (ENSSBOG00000030072) #22 ENSSBOG00000026401 ENSSBOG00000018159 SPON2 (ENSSBOG00000031498) #24 CTBP1 (ENSSBOG00000009891) #25 MAEA (ENSSBOG00000030338) #26 ENSSBOG00000029534 #27 FAM53A (ENSSBOG00000034926) #29 SLBP (ENSSBOG00000033897) #30 TMEM129 (ENSSBOG00000035214) #32 TACC3 (ENSSBOG00000022484) #31 FGFR3 (ENSSBOG00000028613) #33 LETM1 (ENSSBOG00000027558) #34 NSD2 (ENSSBOG00000020624) #35 NELFA (ENSSBOG00000024481) #36 ENSSBOG00000021831 Capuchin MODERN SPECIES 117 TMEM271 (ENSCCAG00000001350) #10 PDE6B (ENSCCAG00000035855) #11 ENSCCAG00000033248 ATP5ME (ENSCCAG00000018522) #12 MYL5 (ENSCCAG00000028429) #13 SLC49A3 (ENSCCAG00000028444) #14 ENSCCAG00000021759 PCGF3 (ENSCCAG00000032635) #15 ENSCCAG00000034446 CPLX1 (ENSCCAG00000021219) #16 GAK (ENSCCAG00000035657) #17 TMEM175 (ENSCCAG00000032889) #18 DGKQ (ENSCCAG00000030615) #19 SLC26A1 (ENSCCAG00000026035) #20 IDUA (ENSCCAG00000007900) #21 FGFRL1 (ENSCCAG00000032864) #22 RNF212 (ENSCCAG00000037676) #23 ENSCCAG00000025209 SPON2 (ENSCCAG00000032899) #24 CTBP1 (ENSCCAG00000037066) #25 ENSCCAG00000022660 #26 UVSSA (ENSCCAG00000032486) #27 NKX1-1 (ENSCCAG00000034329) #28 FAM53A (ENSCCAG00000005420) #29 SLBP (ENSCCAG00000026134) #30 TMEM129 (ENSCCAG00000021775) #32 TACC3 (ENSCCAG00000037097) #31 FGFR3 (ENSCCAG00000029787) #33 LETM1 (ENSCCAG00000022623) #34 NSD2 (ENSCCAG00000036562) #35 NELFA (ENSCCAG00000025280) #36 Marmoset MODERN SPECIES 15 ENSCJAG00000085476 ZNF595 (ENSCJAG00000017763) ##7 PIGG (ENSCJAG00000002009) #9 TMEM271 (ENSCJAG00000043742) #10 PDE6B (ENSCJAG00000001990) #11 ENSCJAG00000001989 #12 MYL5 (ENSCJAG00000001984) #13 SLC49A3 (ENSCJAG00000043730) #14 PCGF3 (ENSCJAG00000084559) #15 CPLX1 (ENSCJAG00000042465) #16 GAK (ENSCJAG00000053012) #17 TMEM175 (ENSCJAG00000001891) #18 DGKQ (ENSCJAG00000001866) #19 SLC26A1 (ENSCJAG00000001864) #20 IDUA (ENSCJAG00000001838) #21 FGFRL1 (ENSCJAG00000001812) #22 ENSCJAG00000082677 ENSCJAG00000012473 SPON2 (ENSCJAG00000048623) #24 ENSCJAG00000001565 #25 MAEA (ENSCJAG00000078979) #26 UVSSA (ENSCJAG00000041289) #27 NKX1-1 (ENSCJAG00000079323) #28 FAM53A (ENSCJAG00000001781) #29 SLBP (ENSCJAG00000001790) #30 TACC3 (ENSCJAG00000001805) #31 FGFR3 (ENSCJAG00000001819) #33 ENSCJAG00000059838 LETM1 (ENSCJAG00000001859) #34 NSD2 (ENSCJAG00000001876) #35 NELFA (ENSCJAG00000039975) #36 Mas night monkey MODERN SPECIES 390 PDE6B (ENSANAG00000029619) #11 ENSANAG00000024226 #12 MYL5 (ENSANAG00000020438) #13 SLC49A3 (ENSANAG00000024183) #14 PCGF3 (ENSANAG00000022373) #15 ENSANAG00000022040 ENSANAG00000028608 ##16 GAK (ENSANAG00000016011) #17 TMEM175 (ENSANAG00000032452) #18 DGKQ (ENSANAG00000024388) #19 SLC26A1 (ENSANAG00000028621) #20 IDUA (ENSANAG00000020464) #21 FGFRL1 (ENSANAG00000021443) #22 RNF212 (ENSANAG00000025317) #23 ENSANAG00000020575 SPON2 (ENSANAG00000020347) #24 Tarsier MODERN SPECIES 3749 IDUA (ENSTSYG00000033871) #21 FGFRL1 (ENSTSYG00000001476) #22 ENSTSYG00000008983 SPON2 (ENSTSYG00000035979) #24 CTBP1 (ENSTSYG00000012840) #25 MAEA (ENSTSYG00000013011) #26 Strepsirrhini ANCESTRAL SPECIES 40 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Lemuriformes ANCESTRAL SPECIES 44 ENSGT00950000183067.a.a ENSGT00950000182850.a.b.a.a ENSGT00530000063812.A ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Mouse lemur MODERN SPECIES 9 ABLIM2 (ENSMICG00000005733) SH3TC1 (ENSMICG00000013247) PIGG (ENSMICG00000012340) #9 PDE6B (ENSMICG00000010725) #11 ATP5ME (ENSMICG00000046376) #12 MYL5 (ENSMICG00000034354) #13 SLC49A3 (ENSMICG00000035034) #14 PCGF3 (ENSMICG00000046135) #15 ENSMICG00000032656 CPLX1 (ENSMICG00000036308) #16 GAK (ENSMICG00000012895) #17 TMEM175 (ENSMICG00000029354) #18 DGKQ (ENSMICG00000012917) #19 SLC26A1 (ENSMICG00000033003) #20 IDUA (ENSMICG00000012938) #21 FGFRL1 (ENSMICG00000030053) #22 RNF212 (ENSMICG00000047687) #23 ENSMICG00000033680 ENSMICG00000036701 SPON2 (ENSMICG00000002454) #24 CTBP1 (ENSMICG00000012941) #25 MAEA (ENSMICG00000012953) #26 UVSSA (ENSMICG00000012963) #27 ENSMICG00000044932 NKX1-1 (ENSMICG00000042887) #28 FAM53A (ENSMICG00000044027) #29 SLBP (ENSMICG00000014244) #30 TMEM129 (ENSMICG00000014263) #32 ENSMICG00000033578 FGFR3 (ENSMICG00000008153) #33 LETM1 (ENSMICG00000008169) #34 Lemuriformes_a ANCESTRAL SPECIES 93 ENSGT00950000183067.a.a ENSGT00950000182850.a.b.a.a ENSGT00530000063812.A ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 Greater bamboo lemur MODERN SPECIES 172 ABLIM2 (ENSPSMG00000004485) SH3TC1 (ENSPSMG00000003934) PIGG (ENSPSMG00000003730) #9 ENSPSMG00000003611 PDE6B (ENSPSMG00000003606) #11 SLC49A3 (ENSPSMG00000003590) #14 PCGF3 (ENSPSMG00000003577) #15 CPLX1 (ENSPSMG00000003571) #16 GAK (ENSPSMG00000003100) #17 TMEM175 (ENSPSMG00000002873) #18 SLC26A1 (ENSPSMG00000002846) #20 IDUA (ENSPSMG00000002839) #21 FGFRL1 (ENSPSMG00000002798) #22 ENSPSMG00000002762 ENSPSMG00000002744 SPON2 (ENSPSMG00000002740) #24 CTBP1 (ENSPSMG00000002685) #25 MAEA (ENSPSMG00000002411) #26 ENSPSMG00000002286 #27 NKX1-1 (ENSPSMG00000002273) #28 ENSPSMG00000002267 FAM53A (ENSPSMG00000002260) #29 SLBP (ENSPSMG00000002177) #30 TMEM129 (ENSPSMG00000002100) #32 Coquerels sifaka MODERN SPECIES 944 PDE6B (ENSPCOG00000002936) #11 ATP5ME (ENSPCOG00000018948) #12 MYL5 (ENSPCOG00000016216) #13 SLC49A3 (ENSPCOG00000002317) #14 PCGF3 (ENSPCOG00000006411) #15 CPLX1 (ENSPCOG00000021294) #16 GAK (ENSPCOG00000009869) #17 TMEM175 (ENSPCOG00000028317) #18 DGKQ (ENSPCOG00000010028) #19 IDUA (ENSPCOG00000016615) #21 SLC26A1 (ENSPCOG00000027903) #20 FGFRL1 (ENSPCOG00000015256) #22 ENSPCOG00000022474 #23 ENSPCOG00000016231 SPON2 (ENSPCOG00000022718) #24 CTBP1 (ENSPCOG00000012972) #25 MAEA (ENSPCOG00000015460) #26 UVSSA (ENSPCOG00000026955) #27 ENSPCOG00000010656 ENSPCOG00000017605 NKX1-1 (ENSPCOG00000012600) #28 FAM53A (ENSPCOG00000016812) #29 SLBP (ENSPCOG00000017399) #30 TMEM129 (ENSPCOG00000026738) #32 TACC3 (ENSPCOG00000024203) #31 Bushbaby MODERN SPECIES 313 PIGG (ENSOGAG00000001238) #9 PDE6B (ENSOGAG00000012260) #11 ATP5ME (ENSOGAG00000012271) #12 MYL5 (ENSOGAG00000026759) #13 ENSOGAG00000026298 #14 PCGF3 (ENSOGAG00000015569) #15 CPLX1 (ENSOGAG00000024771) #16 GAK (ENSOGAG00000015576) #17 TMEM175 (ENSOGAG00000015589) #18 DGKQ (ENSOGAG00000015595) #19 IDUA (ENSOGAG00000015603) #21 SLC26A1 (ENSOGAG00000015601) #20 FGFRL1 (ENSOGAG00000015610) #22 ENSOGAG00000030464 SPON2 (ENSOGAG00000006366) #24 CTBP1 (ENSOGAG00000006367) #25 MAEA (ENSOGAG00000006370) #26 UVSSA (ENSOGAG00000006373) #27 NKX1-1 (ENSOGAG00000034822) #28 ENSOGAG00000014882 SLBP (ENSOGAG00000009750) #30 TMEM129 (ENSOGAG00000014873) #32 TACC3 (ENSOGAG00000014875) #31 FGFR3 (ENSOGAG00000025157) #33 ENSOGAG00000014883 #34 NSD2 (ENSOGAG00000014890) #35 NELFA (ENSOGAG00000029627) #36 C4orf48 (ENSOGAG00000031277) #37 Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Tree shrew MODERN SPECIES 1197 ENSTBEG00000006828 #22 Glires ANCESTRAL SPECIES 8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Lagomorpha ANCESTRAL SPECIES ENSGT00940000156736 #22 Pika MODERN SPECIES 924 FGFRL1 (ENSOPRG00000011610) #22 Rodentia ANCESTRAL SPECIES 13 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Rodentia_A ANCESTRAL SPECIES 20 ENSGT00940000153505.a.a.d.a ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Sciuridae ANCESTRAL SPECIES 19 ENSGT00940000153505.a.a.d.a ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Marmotini ANCESTRAL SPECIES 26 ENSGT00940000153505.a.a.d.a ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Marmotini_b ANCESTRAL SPECIES 33 ENSGT00940000153505.a.a.d.a ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Arctic ground squirrel MODERN SPECIES 677 ENSUPAG00010022951 ENSUPAG00010022952 #12 ENSUPAG00010022953 #13 SLC49A3 (ENSUPAG00010022955) #14 PCGF3 (ENSUPAG00010022958) #15 CPLX1 (ENSUPAG00010022961) #16 GAK (ENSUPAG00010022966) #17 TMEM175 (ENSUPAG00010022973) #18 DGKQ (ENSUPAG00010022980) #19 SLC26A1 (ENSUPAG00010022987) #20 IDUA (ENSUPAG00010022989) #21 FGFRL1 (ENSUPAG00010022991) #22 ENSUPAG00010022992 ENSUPAG00010022995 SPON2 (ENSUPAG00010023054) #24 CTBP1 (ENSUPAG00010023056) #25 MAEA (ENSUPAG00010023061) #26 UVSSA (ENSUPAG00010023065) #27 NKX1-1 (ENSUPAG00010023067) #28 Squirrel MODERN SPECIES 77 ENSSTOG00000033855 PIGG (ENSSTOG00000015902) #9 PDE6B (ENSSTOG00000020412) #11 ATP5ME (ENSSTOG00000028406) #12 MYL5 (ENSSTOG00000025648) #13 SLC49A3 (ENSSTOG00000001785) #14 PCGF3 (ENSSTOG00000022357) #15 CPLX1 (ENSSTOG00000023284) #16 GAK (ENSSTOG00000014540) #17 TMEM175 (ENSSTOG00000014558) #18 DGKQ (ENSSTOG00000014572) #19 SLC26A1 (ENSSTOG00000029038) #20 IDUA (ENSSTOG00000006937) #21 FGFRL1 (ENSSTOG00000022392) #22 ENSSTOG00000031016 #23 ENSSTOG00000028967 SPON2 (ENSSTOG00000025443) #24 CTBP1 (ENSSTOG00000005891) #25 MAEA (ENSSTOG00000005706) #26 UVSSA (ENSSTOG00000005729) #27 ENSSTOG00000031320 #28 FAM53A (ENSSTOG00000023406) #29 SLBP (ENSSTOG00000003262) #30 TMEM129 (ENSSTOG00000020817) #32 TACC3 (ENSSTOG00000012665) #31 FGFR3 (ENSSTOG00000000815) #33 LETM1 (ENSSTOG00000014167) #34 NSD2 (ENSSTOG00000003369) #35 NELFA (ENSSTOG00000003421) #36 Eurasian red squirrel MODERN SPECIES 18 PIGG (ENSSVLG00005014233) #9 TMEM271 (ENSSVLG00005014190) #10 PDE6B (ENSSVLG00005013753) #11 ATP5ME (ENSSVLG00005013538) #12 MYL5 (ENSSVLG00005013392) #13 SLC49A3 (ENSSVLG00005013329) #14 PCGF3 (ENSSVLG00005013252) #15 CPLX1 (ENSSVLG00005013206) #16 GAK (ENSSVLG00005012944) #17 TMEM175 (ENSSVLG00005012860) #18 SLC26A1 (ENSSVLG00005012770) #20 IDUA (ENSSVLG00005012525) #21 FGFRL1 (ENSSVLG00005012435) #22 ENSSVLG00005012104 SPON2 (ENSSVLG00005012045) #24 CTBP1 (ENSSVLG00005011900) #25 ENSSVLG00005011867 MAEA (ENSSVLG00005011623) #26 UVSSA (ENSSVLG00005011273) #27 NKX1-1 (ENSSVLG00005011200) #28 FAM53A (ENSSVLG00005011171) #29 SLBP (ENSSVLG00005010930) #30 TMEM129 (ENSSVLG00005010840) #32 TACC3 (ENSSVLG00005010736) #31 FGFR3 (ENSSVLG00005018602) #33 ENSSVLG00005018420 #34 NSD2 (ENSSVLG00005018333) #35 NELFA (ENSSVLG00005018189) #36 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00940000153505.a.a.d.a ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Hystricomorpha_b ANCESTRAL SPECIES 37 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Long-tailed chinchilla MODERN SPECIES 221 ENSCLAG00000007687 PIGG (ENSCLAG00000008688) #9 PDE6B (ENSCLAG00000012451) #11 ENSCLAG00000013989 SLC49A3 (ENSCLAG00000010259) #14 PCGF3 (ENSCLAG00000007990) #15 CPLX1 (ENSCLAG00000008954) #16 GAK (ENSCLAG00000010881) #17 TMEM175 (ENSCLAG00000010483) #18 DGKQ (ENSCLAG00000011985) #19 SLC26A1 (ENSCLAG00000006725) #20 IDUA (ENSCLAG00000011871) #21 FGFRL1 (ENSCLAG00000007552) #22 ENSCLAG00000008587 #23 ENSCLAG00000010654 SPON2 (ENSCLAG00000006806) #24 CTBP1 (ENSCLAG00000008653) #25 MAEA (ENSCLAG00000013403) #26 UVSSA (ENSCLAG00000008812) #27 ENSCLAG00000007213 #28 FAM53A (ENSCLAG00000007294) #29 SLBP (ENSCLAG00000008157) #30 TMEM129 (ENSCLAG00000010127) #32 TACC3 (ENSCLAG00000011683) #31 FGFR3 (ENSCLAG00000006986) #33 LETM1 (ENSCLAG00000010785) #34 NSD2 (ENSCLAG00000014450) #35 NELFA (ENSCLAG00000012299) #36 Degu MODERN SPECIES 47 ENSODEG00000012894 PIGG (ENSODEG00000012734) #9 PDE6B (ENSODEG00000011771) #11 ATP5ME (ENSODEG00000011933) #12 SLC49A3 (ENSODEG00000012801) #14 PCGF3 (ENSODEG00000012633) #15 CPLX1 (ENSODEG00000013845) #16 ENSODEG00000012338 #17 TMEM175 (ENSODEG00000013374) #18 DGKQ (ENSODEG00000012712) #19 SLC26A1 (ENSODEG00000015117) #20 IDUA (ENSODEG00000012062) #21 FGFRL1 (ENSODEG00000011612) #22 ENSODEG00000012265 #23 ENSODEG00000012726 SPON2 (ENSODEG00000012066) #24 ENSODEG00000013011 #25 MAEA (ENSODEG00000012556) #26 UVSSA (ENSODEG00000011757) #27 FAM53A (ENSODEG00000011180) #29 ENSODEG00000012272 SLBP (ENSODEG00000012641) #30 ENSODEG00000011155 #32 ENSODEG00000012973 #31 ENSODEG00000012582 #33 LETM1 (ENSODEG00000012866) #34 NSD2 (ENSODEG00000012080) #35 NELFA (ENSODEG00000011122) #36 Guinea pig MODERN SPECIES 73 PSD4 (ENSCPOG00000011999) PAX8 (ENSCPOG00000012011) ENSCPOG00000035445 ENSCPOG00000036063 PIGG (ENSCPOG00000005447) #9 PDE6B (ENSCPOG00000022569) #11 ENSCPOG00000008678 #12 SLC49A3 (ENSCPOG00000007487) #14 PCGF3 (ENSCPOG00000034430) #15 CPLX1 (ENSCPOG00000039819) #16 GAK (ENSCPOG00000013147) #17 TMEM175 (ENSCPOG00000026846) #18 DGKQ (ENSCPOG00000002313) #19 SLC26A1 (ENSCPOG00000013797) #20 IDUA (ENSCPOG00000013790) #21 FGFRL1 (ENSCPOG00000008031) #22 ENSCPOG00000010975 #23 ENSCPOG00000021157 SPON2 (ENSCPOG00000036286) #24 CTBP1 (ENSCPOG00000026987) #25 MAEA (ENSCPOG00000011071) #26 UVSSA (ENSCPOG00000013735) #27 NKX1-1 (ENSCPOG00000039976) #28 PACRGL (ENSCPOG00000011800) SLIT2 (ENSCPOG00000011787) ENSCPOG00000034518 NCAPG (ENSCPOG00000001220) FAM184B (ENSCPOG00000012619) MED28 (ENSCPOG00000012616) LAP3 (ENSCPOG00000012626) CLRN2 (ENSCPOG00000037206) Rodentia_B ANCESTRAL SPECIES 19 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Kangaroo rat MODERN SPECIES 390 ENSDORG00000023269 ENSDORG00000024202 Pigg (ENSDORG00000006133) #9 Pde6b (ENSDORG00000009708) #11 ENSDORG00000009710 Mfsd7a (ENSDORG00000009715) #14 Pcgf3 (ENSDORG00000009042) #15 Cplx1 (ENSDORG00000029628) #16 Gak (ENSDORG00000006541) #17 Tmem175 (ENSDORG00000008465) #18 Dgkq (ENSDORG00000008460) #19 Idua (ENSDORG00000004020) #21 Slc26a1 (ENSDORG00000024823) #20 Fgfrl1 (ENSDORG00000016596) #22 ENSDORG00000024007 Tmed11 (ENSDORG00000013022) Spon2 (ENSDORG00000025165) #24 ENSDORG00000024801 #25 Maea (ENSDORG00000007382) #26 Uvssa (ENSDORG00000001679) #27 ENSDORG00000025230 Fam53a (ENSDORG00000005663) #29 Slbp (ENSDORG00000003028) #30 ENSDORG00000003030 #32 ENSDORG00000026325 ENSDORG00000009704 #33 ENSDORG00000025862 #33 Letm1 (ENSDORG00000009706) #34 Nsd2 (ENSDORG00000013095) #35 Myomorpha ANCESTRAL SPECIES 19 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Lesser Egyptian jerboa MODERN SPECIES 58 Nkx3-2 (ENSJJAG00000009928) Rab28 (ENSJJAG00000016647) ENSJJAG00000010251 ENSJJAG00000013791 Pigg (ENSJJAG00000009749) #9 Pde6b (ENSJJAG00000008660) #11 Atp5k (ENSJJAG00000012024) #12 Mfsd7a (ENSJJAG00000022347) #14 Pcgf3 (ENSJJAG00000014201) #15 Cplx1 (ENSJJAG00000017665) #16 ENSJJAG00000011664 #17 Tmem175 (ENSJJAG00000019864) #18 Dgkq (ENSJJAG00000000943) #19 Slc26a1 (ENSJJAG00000024417) #20 Idua (ENSJJAG00000010185) #21 Fgfrl1 (ENSJJAG00000012607) #22 ENSJJAG00000022256 Rnf212 (ENSJJAG00000023907) #23 Tmed11 (ENSJJAG00000021956) Spon2 (ENSJJAG00000010729) #24 Ctbp1 (ENSJJAG00000022277) #25 Maea (ENSJJAG00000018909) #26 Uvssa (ENSJJAG00000000552) #27 Nkx1-1 (ENSJJAG00000017578) #28 ENSJJAG00000022694 ENSJJAG00000019010 ENSJJAG00000020549 #30 ENSJJAG00000015175 #32 Tacc3 (ENSJJAG00000015964) #31 Fgfr3 (ENSJJAG00000001873) #33 Letm1 (ENSJJAG00000024090) #34 Muroidea ANCESTRAL SPECIES 17 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010.i.b ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 Cricetinae ANCESTRAL SPECIES 50 ENSGT00950000183180.b ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010.i.b ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 Chinese hamster chok1gshd MODERN SPECIES 229 Tmed5 (ENSCGRG00001024936) Ccdc18 (ENSCGRG00001018990) ENSCGRG00001017631 ENSCGRG00001014204 Pigg (ENSCGRG00001017797) #9 Pde6b (ENSCGRG00001015377) #11 Atp5k (ENSCGRG00001009513) #12 Mfsd7a (ENSCGRG00001015734) #14 Pcgf3 (ENSCGRG00001011904) #15 Cplx1 (ENSCGRG00001018247) #16 Gak (ENSCGRG00001015406) #17 Tmem175 (ENSCGRG00001024209) #18 Dgkq (ENSCGRG00001024827) #19 Idua (ENSCGRG00001021620) #21 Slc26a1 (ENSCGRG00001000616) #20 Fgfrl1 (ENSCGRG00001004322) #22 Rnf212 (ENSCGRG00001014220) #23 ENSCGRG00001021309 Sos1 (ENSCGRG00001014168) Arhgef33 (ENSCGRG00001014112) ENSCGRG00001011662 ENSCGRG00001000299 Dhx57 (ENSCGRG00001022501) Gemin6 (ENSCGRG00001017426) Ttc39d (ENSCGRG00001012479) Srsf7 (ENSCGRG00001018245) Galm (ENSCGRG00001022116) Hnrnpll (ENSCGRG00001015494) Atl2 (ENSCGRG00001009453) Cyp1b1 (ENSCGRG00001023693) Rmdn2 (ENSCGRG00001016405) Golden Hamster MODERN SPECIES 689 Mtf2 (ENSMAUG00000016120) Tmed5 (ENSMAUG00000013238) Ccdc18 (ENSMAUG00000006968) ENSMAUG00000010844 Pigg (ENSMAUG00000012910) #9 Pde6b (ENSMAUG00000018594) #11 ENSMAUG00000019145 #12 Mfsd7a (ENSMAUG00000008667) #14 Pcgf3 (ENSMAUG00000018210) #15 Cplx1 (ENSMAUG00000013358) #16 ENSMAUG00000010451 #17 Tmem175 (ENSMAUG00000015592) #18 Dgkq (ENSMAUG00000008006) #19 Idua (ENSMAUG00000022060) #21 Slc26a1 (ENSMAUG00000017218) #20 Fgfrl1 (ENSMAUG00000018136) #22 Rnf212 (ENSMAUG00000013557) #23 Or2j3 (ENSMAUG00000013604) Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010.i.b ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 Northern American deer mouse MODERN SPECIES 1 Tmed5 (ENSPEMG00000021997) Ccdc18 (ENSPEMG00000024210) Dr1 (ENSPEMG00000030546) Pigg (ENSPEMG00000022476) #9 Gm42517 (ENSPEMG00000024623) #10 Pde6b (ENSPEMG00000023203) #11 ENSPEMG00000021488 #12 Mfsd7a (ENSPEMG00000020866) #14 Pcgf3 (ENSPEMG00000020597) #15 Cplx1 (ENSPEMG00000030316) #16 Gak (ENSPEMG00000021274) #17 Tmem175 (ENSPEMG00000021088) #18 Dgkq (ENSPEMG00000003725) #19 Idua (ENSPEMG00000023139) #21 Slc26a1 (ENSPEMG00000026895) #20 Fgfrl1 (ENSPEMG00000021821) #22 Rnf212 (ENSPEMG00000020742) #23 ENSPEMG00000018025 ENSPEMG00000025521 Murinae ANCESTRAL SPECIES 12 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 Mus ANCESTRAL SPECIES 14 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 Mus_A ANCESTRAL SPECIES 6 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00950000183069.b.b.a.b.c.a.b.b.e.a.a.a.a.b.b ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a ENSGT00940000161625 ENSGT00390000001397 ENSGT00940000162586 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 ENSGT00390000010780 ENSGT00390000010194 ENSGT01020000230351.A Mus_B ANCESTRAL SPECIES 4 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00950000183069.b.b.a.b.c.a.b.b.e.a.a.a.a.b.b.a.a ENSGT00510000049974 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a.b ENSGT00940000161625 ENSGT00390000001397 ENSGT00940000162586 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 ENSGT00390000010780 ENSGT00390000010194 Mouse MODERN SPECIES 14 Tmed5 (ENSMUSG00000063406) Ccdc18 (ENSMUSG00000056531) Dr1 (ENSMUSG00000029265) Pigg (ENSMUSG00000029263) #9 Gm42517 (ENSMUSG00000105867) #10 Pde6b (ENSMUSG00000029491) #11 Atp5k (ENSMUSG00000050856) #12 Mfsd7a (ENSMUSG00000029490) #14 Pcgf3 (ENSMUSG00000033623) #15 Cplx1 (ENSMUSG00000033615) #16 Gak (ENSMUSG00000062234) #17 Tmem175 (ENSMUSG00000013495) #18 Dgkq (ENSMUSG00000004815) #19 Idua (ENSMUSG00000033540) #21 Slc26a1 (ENSMUSG00000046959) #20 Fgfrl1 (ENSMUSG00000008090) #22 Rnf212 (ENSMUSG00000055385) #23 Tmed11 (ENSMUSG00000004821) Vmn2r8 (ENSMUSG00000090961) Vmn2r9 (ENSMUSG00000091624) Vmn2r10 (ENSMUSG00000067010) Vmn2r11 (ENSMUSG00000091450) Vmn2r12 (ENSMUSG00000090688) Vmn2r13 (ENSMUSG00000091635) Vmn2r14 (ENSMUSG00000091059) Vmn2r15 (ENSMUSG00000091375) Vmn2r16 (ENSMUSG00000092080) Vmn2r17 (ENSMUSG00000091879) Crlf2 (ENSMUSG00000033467) 5430403G16Rik (ENSMUSG00000072763) 4930522L14Rik (ENSMUSG00000072762) Mus_C ANCESTRAL SPECIES 4 ENSGT00940000155468 ENSGT00940000153190.A ENSGT00550000075010 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00950000183069.b.b.a.b.c.a.b.b.e.a.a.a.a.b.b.a.a ENSGT00510000049974 ENSGT00940000153805.q.b.a.a.a.b.b.b.a.a.b ENSGT00940000161625 ENSGT00390000001397 ENSGT00940000162586 ENSGT00400000022306 ENSGT00950000183078.b.b ENSGT00390000016767 ENSGT00390000004796 ENSGT00940000161539 ENSGT00390000010780 ENSGT00390000010194 Steppe mouse MODERN SPECIES 3278 Tmed5 (ENSMSIG00000020304) Ccdc18 (ENSMSIG00000020376) ENSMSIG00000020415 Dr1 (ENSMSIG00000020419) Pigg (ENSMSIG00000020443) #9 Gm42517 (ENSMSIG00000020614) #10 ENSMSIG00000020619 Pde6b (ENSMSIG00000020631) #11 ENSMSIG00000020698 #12 Mfsd7a (ENSMSIG00000020719) #14 Pcgf3 (ENSMSIG00000020743) #15 Cplx1 (ENSMSIG00000020759) #16 Gak (ENSMSIG00000020768) #17 Tmem175 (ENSMSIG00000020858) #18 Dgkq (ENSMSIG00000020878) #19 ENSMSIG00000020914 #22 Slc26a1 (ENSMSIG00000021045) #20 ENSMSIG00000021102 #23 Tmed11 (ENSMSIG00000021117) Vmn2r8 (ENSMSIG00000021129) spretus MODERN SPECIES 14 Mtf2 (MGP_SPRETEiJ_G0028512) Tmed5 (MGP_SPRETEiJ_G0028513) Ccdc18 (MGP_SPRETEiJ_G0028514) Dr1 (MGP_SPRETEiJ_G0028515) Pigg (MGP_SPRETEiJ_G0028516) #9 Pde6b (MGP_SPRETEiJ_G0028517) #11 Atp5k (MGP_SPRETEiJ_G0028518) #12 Mfsd7a (MGP_SPRETEiJ_G0028519) #14 Pcgf3 (MGP_SPRETEiJ_G0028520) #15 Cplx1 (MGP_SPRETEiJ_G0028521) #16 Gak (MGP_SPRETEiJ_G0028522) #17 Tmem175 (MGP_SPRETEiJ_G0028523) #18 Dgkq (MGP_SPRETEiJ_G0028524) #19 Idua (MGP_SPRETEiJ_G0028525) #21 Slc26a1 (MGP_SPRETEiJ_G0028526) #20 Fgfrl1 (MGP_SPRETEiJ_G0028527) #22 MGP_SPRETEiJ_G0028528 Tmed11 (MGP_SPRETEiJ_G0028529) Vmn2r16 (MGP_SPRETEiJ_G0028530) Crlf2 (MGP_SPRETEiJ_G0028531) MGP_SPRETEiJ_G0028532 Plcxd1 (MGP_SPRETEiJ_G0028533) Gtpbp6 (MGP_SPRETEiJ_G0028534) Zfp605 (MGP_SPRETEiJ_G0028535) Chfr (MGP_SPRETEiJ_G0028536) Golga3 (MGP_SPRETEiJ_G0028537) Ankle2 (MGP_SPRETEiJ_G0028538) Pgam5 (MGP_SPRETEiJ_G0028539) Pxmp2 (MGP_SPRETEiJ_G0028540) Pole (MGP_SPRETEiJ_G0028541) P2rx2 (MGP_SPRETEiJ_G0028542) Ryukyu mouse MODERN SPECIES 14 MGP_CAROLIEiJ_G0027513 Tmed5 (MGP_CAROLIEiJ_G0027514) Ccdc18 (MGP_CAROLIEiJ_G0027515) Dr1 (MGP_CAROLIEiJ_G0027516) Pigg (MGP_CAROLIEiJ_G0027517) #9 Pde6b (MGP_CAROLIEiJ_G0027518) #11 Atp5k (MGP_CAROLIEiJ_G0027519) #12 Mfsd7a (MGP_CAROLIEiJ_G0027520) #14 Pcgf3 (MGP_CAROLIEiJ_G0027521) #15 Cplx1 (MGP_CAROLIEiJ_G0027522) #16 Gak (MGP_CAROLIEiJ_G0027523) #17 Tmem175 (MGP_CAROLIEiJ_G0027524) #18 Dgkq (MGP_CAROLIEiJ_G0027525) #19 Idua (MGP_CAROLIEiJ_G0027526) #21 Slc26a1 (MGP_CAROLIEiJ_G0027527) #20 Fgfrl1 (MGP_CAROLIEiJ_G0027528) #22 MGP_CAROLIEiJ_G0027529 Tmed11 (MGP_CAROLIEiJ_G0027530) MGP_CAROLIEiJ_G0027531 MGP_CAROLIEiJ_G0027532 MGP_CAROLIEiJ_G0027533 MGP_CAROLIEiJ_G0027534 MGP_CAROLIEiJ_G0027535 Gtpbp6 (MGP_CAROLIEiJ_G0027536) MGP_CAROLIEiJ_G0027537 Chfr (MGP_CAROLIEiJ_G0027538) Golga3 (MGP_CAROLIEiJ_G0027539) Ankle2 (MGP_CAROLIEiJ_G0027540) Pgam5 (MGP_CAROLIEiJ_G0027541) Pxmp2 (MGP_CAROLIEiJ_G0027542) Pole (MGP_CAROLIEiJ_G0027543) Shrew mouse MODERN SPECIES 4 Mtf2 (MGP_PahariEiJ_G0017286) Tmed5 (MGP_PahariEiJ_G0017287) Ccdc18 (MGP_PahariEiJ_G0017288) Dr1 (MGP_PahariEiJ_G0017289) Pigg (MGP_PahariEiJ_G0017290) #9 Pde6b (MGP_PahariEiJ_G0017291) #11 Atp5k (MGP_PahariEiJ_G0017292) #12 Mfsd7a (MGP_PahariEiJ_G0017293) #14 Pcgf3 (MGP_PahariEiJ_G0017294) #15 Cplx1 (MGP_PahariEiJ_G0017295) #16 Gak (MGP_PahariEiJ_G0017296) #17 Tmem175 (MGP_PahariEiJ_G0017297) #18 Dgkq (MGP_PahariEiJ_G0017298) #19 Idua (MGP_PahariEiJ_G0017299) #21 Slc26a1 (MGP_PahariEiJ_G0017300) #20 Fgfrl1 (MGP_PahariEiJ_G0017301) #22 MGP_PahariEiJ_G0017302 Tmed11 (MGP_PahariEiJ_G0017303) Rat MODERN SPECIES 5 Dipk1a (ENSRNOG00000023533) Mtf2 (ENSRNOG00000000075) Tmed5 (ENSRNOG00000000073) Ccdc18 (ENSRNOG00000024545) Dr1 (ENSRNOG00000000070) Pigg (ENSRNOG00000071170) #9 Pde6b (ENSRNOG00000000065) #11 Atp5me (ENSRNOG00000000064) Slc49a3 (ENSRNOG00000023937) #14 Pcgf3 (ENSRNOG00000000062) #15 Gak (ENSRNOG00000000048) #17 Tmem175 (ENSRNOG00000000044) #18 Dgkq (ENSRNOG00000024112) #19 Slc26a1 (ENSRNOG00000000041) #20 Idua (ENSRNOG00000000043) #21 Fgfrl1 (ENSRNOG00000024207) #22 Rnf212 (ENSRNOG00000059010) #23 Tmed11 (ENSRNOG00000000035) Vom2r72 (ENSRNOG00000066629) Vom2r71 (ENSRNOG00000063032) Vom2r70 (ENSRNOG00000064123) ENSRNOG00000064100 ENSRNOG00000066410 Vom2r69 (ENSRNOG00000040210) Vmn2r116l-ps37 (ENSRNOG00000065665) Vom2r68 (ENSRNOG00000066418) Vom2r-ps113 (ENSRNOG00000068730) Vom2r67 (ENSRNOG00000031928) LOC102554605 (ENSRNOG00000066877) Vom2r66 (ENSRNOG00000067972) ENSRNOG00000069417 Upper Galilee mountains blind mole rat MODERN SPECIES 1177 Cplx1 (ENSNGAG00000021285) #16 ENSNGAG00000000725 #17 Tmem175 (ENSNGAG00000020623) #18 Dgkq (ENSNGAG00000022655) #19 Idua (ENSNGAG00000023311) #21 Slc26a1 (ENSNGAG00000019448) #20 ENSNGAG00000019399 #22 Rnf212 (ENSNGAG00000019964) #23 Tmed11 (ENSNGAG00000003592) Spon2 (ENSNGAG00000007051) #24 Ctbp1 (ENSNGAG00000010894) #25 Maea (ENSNGAG00000002281) #26 Uvssa (ENSNGAG00000012000) #27 Nkx1-1 (ENSNGAG00000013945) #28 ENSNGAG00000015315 Slbp (ENSNGAG00000020799) #30 Tmem129 (ENSNGAG00000017856) #32 Tacc3 (ENSNGAG00000017862) #31 Fgfr3 (ENSNGAG00000015713) #33 Letm1 (ENSNGAG00000000720) #34 Nsd2 (ENSNGAG00000010171) #35 Nelfa (ENSNGAG00000023963) #36 Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000165250 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000156736 #22 Common shrew MODERN SPECIES 10300 FGFRL1 (ENSSARG00000007737) #22 Hedgehog MODERN SPECIES 2594 ENSEEUG00000000050 #22 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Artiodactyla ANCESTRAL SPECIES 12 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Suina ANCESTRAL SPECIES 33 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Chacoan peccary MODERN SPECIES 973 IDUA (ENSCWAG00000021369) #21 SLC26A1 (ENSCWAG00000021378) #20 FGFRL1 (ENSCWAG00000011912) #22 ENSCWAG00000011976 SPON2 (ENSCWAG00000012042) #24 Pig MODERN SPECIES 16 PIGG (ENSSSCG00000039991) #9 TMEM271 (ENSSSCG00000043358) #10 PDE6B (ENSSSCG00000036645) #11 ATP5ME (ENSSSCG00000023903) #12 MYL5 (ENSSSCG00000027502) #13 SLC49A3 (ENSSSCG00000026084) #14 PCGF3 (ENSSSCG00000029983) #15 CPLX1 (ENSSSCG00000037527) #16 GAK (ENSSSCG00000021289) #17 TMEM175 (ENSSSCG00000038234) #18 DGKQ (ENSSSCG00000027286) #19 IDUA (ENSSSCG00000032262) #21 SLC26A1 (ENSSSCG00000035739) #20 FGFRL1 (ENSSSCG00000036512) #22 ENSSSCG00000045703 #23 ENSSSCG00000032808 SPON2 (ENSSSCG00000039488) #24 CTBP1 (ENSSSCG00000031302) #25 MAEA (ENSSSCG00000032304) #26 UVSSA (ENSSSCG00000037035) #27 NKX1-1 (ENSSSCG00000038573) #28 FAM53A (ENSSSCG00000032633) #29 SLBP (ENSSSCG00000055957) #30 TMEM129 (ENSSSCG00000008678) #32 ENSSSCG00000008677 #31 FGFR3 (ENSSSCG00000030827) #33 LETM1 (ENSSSCG00000008675) #34 NSD2 (ENSSSCG00000008682) #35 NELFA (ENSSSCG00000008681) #36 Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Camelidae ANCESTRAL SPECIES 22 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT01100000267033 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B Arabian camel MODERN SPECIES 11 PIGG (ENSCDRG00005006940) #9 PDE6B (ENSCDRG00005006524) #11 ATP5ME (ENSCDRG00005006486) #12 MYL5 (ENSCDRG00005006426) #13 SLC49A3 (ENSCDRG00005006389) #14 PCGF3 (ENSCDRG00005006297) #15 CPLX1 (ENSCDRG00005006266) #16 GAK (ENSCDRG00005006048) #17 TMEM175 (ENSCDRG00005005998) #18 DGKQ (ENSCDRG00005005859) #19 SLC26A1 (ENSCDRG00005005838) #20 IDUA (ENSCDRG00005005765) #21 FGFRL1 (ENSCDRG00005005733) #22 ENSCDRG00005005690 SPON2 (ENSCDRG00005005679) #24 CTBP1 (ENSCDRG00005005616) #25 MAEA (ENSCDRG00005005461) #26 UVSSA (ENSCDRG00005005400) #27 NKX1-1 (ENSCDRG00005005367) #28 SLBP (ENSCDRG00005005313) #30 TMEM129 (ENSCDRG00005005274) #32 TACC3 (ENSCDRG00005005231) #31 LETM1 (ENSCDRG00005005053) #34 ENSCDRG00005005023 #35 ENSCDRG00005004993 NELFA (ENSCDRG00005004890) #36 C4orf48 (ENSCDRG00005004867) #37 ENSCDRG00005004858 Artiodactyla_b ANCESTRAL SPECIES 30 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Cetacea ANCESTRAL SPECIES 12 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Odontoceti ANCESTRAL SPECIES 11 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000154158.k.b ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00550000074784.a.b ENSGT01030000234916 Odontoceti_a ANCESTRAL SPECIES 22 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000154158.k.b ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.r #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00550000074784.a.b ENSGT00940000157429 #35 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000154158.k.b ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.r #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00550000074784.a.b ENSGT00940000157429 #35 Monodontidae ANCESTRAL SPECIES 9 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000154158.k.b ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.r #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00550000074784.a.b ENSGT00940000157429 #35 Beluga whale MODERN SPECIES 77 PIGG (ENSDLEG00000017203) #9 PDE6B (ENSDLEG00000017070) #11 ATP5I (ENSDLEG00000017055) #12 PCGF3 (ENSDLEG00000017030) #15 CPLX1 (ENSDLEG00000017019) #16 GAK (ENSDLEG00000016954) #17 TMEM175 (ENSDLEG00000016926) #18 DGKQ (ENSDLEG00000016886) #19 SLC26A1 (ENSDLEG00000016873) #20 IDUA (ENSDLEG00000016854) #21 FGFRL1 (ENSDLEG00000016841) #22 ENSDLEG00000016829 SPON2 (ENSDLEG00000016801) #24 CTBP1 (ENSDLEG00000016785) #25 ENSDLEG00000016755 MAEA (ENSDLEG00000016731) #26 UVSSA (ENSDLEG00000016715) #27 NKX1-1 (ENSDLEG00000016706) #28 FAM53A (ENSDLEG00000016696) #29 SLBP (ENSDLEG00000016673) #30 TMEM129 (ENSDLEG00000016657) #32 ENSDLEG00000016641 #31 FGFR3 (ENSDLEG00000016588) #33 LETM1 (ENSDLEG00000016566) #34 ENSDLEG00000016553 NSD2 (ENSDLEG00000016523) #35 Narwhal MODERN SPECIES 307 PIGG (ENSMMNG00015009522) #9 PDE6B (ENSMMNG00015009392) #11 ATP5ME (ENSMMNG00015009364) #12 MYL5 (ENSMMNG00015009356) #13 PCGF3 (ENSMMNG00015009310) #15 CPLX1 (ENSMMNG00015009283) #16 GAK (ENSMMNG00015009230) #17 TMEM175 (ENSMMNG00015009155) #18 DGKQ (ENSMMNG00015009133) #19 SLC26A1 (ENSMMNG00015009113) #20 IDUA (ENSMMNG00015009092) #21 FGFRL1 (ENSMMNG00015009082) #22 ENSMMNG00015009070 SPON2 (ENSMMNG00015009059) #24 CTBP1 (ENSMMNG00015009032) #25 ENSMMNG00015009007 MAEA (ENSMMNG00015008969) #26 UVSSA (ENSMMNG00015008918) #27 NKX1-1 (ENSMMNG00015008894) #28 FAM53A (ENSMMNG00015008881) #29 SLBP (ENSMMNG00015008857) #30 TMEM129 (ENSMMNG00015008823) #32 TACC3 (ENSMMNG00015008798) #31 FGFR3 (ENSMMNG00015008748) #33 LETM1 (ENSMMNG00015008712) #34 ENSMMNG00015008696 NSD2 (ENSMMNG00015008622) #35 Vaquita MODERN SPECIES 16 PIGG (ENSPSNG00000016423) #9 TMEM271 (ENSPSNG00000016569) #10 PDE6B (ENSPSNG00000016617) #11 ENSPSNG00000017190 #12 MYL5 (ENSPSNG00000017230) #13 ENSPSNG00000017281 #14 PCGF3 (ENSPSNG00000017418) #15 CPLX1 (ENSPSNG00000017583) #16 GAK (ENSPSNG00000017715) #17 TMEM175 (ENSPSNG00000018137) #18 DGKQ (ENSPSNG00000018241) #19 IDUA (ENSPSNG00000018525) #21 SLC26A1 (ENSPSNG00000018577) #20 FGFRL1 (ENSPSNG00000018608) #22 ENSPSNG00000018647 SPON2 (ENSPSNG00000018706) #24 CTBP1 (ENSPSNG00000018755) #25 ENSPSNG00000018860 MAEA (ENSPSNG00000018923) #26 UVSSA (ENSPSNG00000019027) #27 NKX1-1 (ENSPSNG00000019051) #28 FAM53A (ENSPSNG00000019099) #29 SLBP (ENSPSNG00000019131) #30 ENSPSNG00000019238 #32 FGFR3 (ENSPSNG00000019417) #33 LETM1 (ENSPSNG00000019524) #34 ENSPSNG00000019562 NSD2 (ENSPSNG00000019603) #35 NELFA (ENSPSNG00000019706) #36 Dolphin MODERN SPECIES 850 IDUA (ENSTTRG00000000105) #21 SLC26A1 (ENSTTRG00000000106) #20 FGFRL1 (ENSTTRG00000000107) #22 Sperm whale MODERN SPECIES 18 ENSPCTG00005009912 CRLF2 (ENSPCTG00005009810) ENSPCTG00005009765 SHOX (ENSPCTG00005009678) PIGG (ENSPCTG00005009546) #9 TMEM271 (ENSPCTG00005009519) #10 PDE6B (ENSPCTG00005008945) #11 ATP5ME (ENSPCTG00005008887) #12 MYL5 (ENSPCTG00005008827) #13 DGKQ (ENSPCTG00005008757) #19 TMEM175 (ENSPCTG00005008678) #18 GAK (ENSPCTG00005007907) #17 CPLX1 (ENSPCTG00005007813) #16 PCGF3 (ENSPCTG00005007779) #15 ENSPCTG00005007664 #21 FGFRL1 (ENSPCTG00005007637) #22 ENSPCTG00005007620 SPON2 (ENSPCTG00005007593) #24 CTBP1 (ENSPCTG00005007566) #25 ENSPCTG00005007552 MAEA (ENSPCTG00005007348) #26 UVSSA (ENSPCTG00005007289) #27 NKX1-1 (ENSPCTG00005007269) #28 FAM53A (ENSPCTG00005007252) #29 SLBP (ENSPCTG00005007183) #30 TMEM129 (ENSPCTG00005007122) #32 TACC3 (ENSPCTG00005007081) #31 FGFR3 (ENSPCTG00005006670) #33 LETM1 (ENSPCTG00005006566) #34 ENSPCTG00005006543 ENSPCTG00005006514 Blue whale MODERN SPECIES 16 PIGG (ENSBMSG00010010796) #9 TMEM271 (ENSBMSG00010010761) #10 PDE6B (ENSBMSG00010010700) #11 ATP5ME (ENSBMSG00010010668) #12 MYL5 (ENSBMSG00010010639) #13 PCGF3 (ENSBMSG00010010613) #15 CPLX1 (ENSBMSG00010010599) #16 GAK (ENSBMSG00010010498) #17 TMEM175 (ENSBMSG00010010458) #18 DGKQ (ENSBMSG00010010384) #19 SLC26A1 (ENSBMSG00010010350) #20 IDUA (ENSBMSG00010010336) #21 FGFRL1 (ENSBMSG00010010322) #22 ENSBMSG00010010309 CTBP1 (ENSBMSG00010010280) #25 MAEA (ENSBMSG00010010210) #26 UVSSA (ENSBMSG00010010170) #27 NKX1-1 (ENSBMSG00010010159) #28 FAM53A (ENSBMSG00010010143) #29 SLBP (ENSBMSG00010010021) #30 TMEM129 (ENSBMSG00010009983) #32 ENSBMSG00010009968 ENSBMSG00010009945 #31 FGFR3 (ENSBMSG00010009892) #33 LETM1 (ENSBMSG00010009849) #34 ENSBMSG00010009841 ENSBMSG00010009831 #35 ENSBMSG00010009815 #35 Pecora ANCESTRAL SPECIES 15 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B Yarkand deer MODERN SPECIES 29 ENSCHYG00000000825 PDE6B (ENSCHYG00000000728) #11 ATP5ME (ENSCHYG00000000699) #12 SLC49A3 (ENSCHYG00000000681) #14 PCGF3 (ENSCHYG00000000659) #15 CPLX1 (ENSCHYG00000000642) #16 GAK (ENSCHYG00000000449) #17 TMEM175 (ENSCHYG00000000372) #18 DGKQ (ENSCHYG00000000312) #19 SLC26A1 (ENSCHYG00000000284) #20 ENSCHYG00000000225 #21 FGFRL1 (ENSCHYG00000000201) #22 ENSCHYG00000000191 SPON2 (ENSCHYG00000026323) #24 ENSCHYG00000026312 CTBP1 (ENSCHYG00000026282) #25 MAEA (ENSCHYG00000026208) #26 UVSSA (ENSCHYG00000026183) #27 SLBP (ENSCHYG00000026159) #30 TMEM129 (ENSCHYG00000026136) #32 ENSCHYG00000026110 #31 ENSCHYG00000026079 #33 LETM1 (ENSCHYG00000026028) #34 ENSCHYG00000025972 #35 NELFA (ENSCHYG00000025867) #36 NAT8L (ENSCHYG00000025851) POLN (ENSCHYG00000025750) Percora_a ANCESTRAL SPECIES 18 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B Siberian musk deer MODERN SPECIES 354 HSPB7 (ENSMMSG00000009671) ENSMMSG00000009694 PIGG (ENSMMSG00000009728) #9 TMEM271 (ENSMMSG00000009780) #10 ENSMMSG00000009811 PDE6B (ENSMMSG00000009898) #11 SLC49A3 (ENSMMSG00000010128) #14 PCGF3 (ENSMMSG00000010181) #15 CPLX1 (ENSMMSG00000010238) #16 ENSMMSG00000010270 #17 ENSMMSG00000010313 #17 TMEM175 (ENSMMSG00000010338) #18 DGKQ (ENSMMSG00000010406) #19 IDUA (ENSMMSG00000010506) #21 SLC26A1 (ENSMMSG00000010599) #20 FGFRL1 (ENSMMSG00000010628) #22 ENSMMSG00000010668 SPON2 (ENSMMSG00000010709) #24 CTBP1 (ENSMMSG00000010749) #25 MAEA (ENSMMSG00000010850) #26 UVSSA (ENSMMSG00000011083) #27 NKX1-1 (ENSMMSG00000011124) #28 SLBP (ENSMMSG00000011149) #30 TMEM129 (ENSMMSG00000011303) #32 ENSMMSG00000011328 #31 FGFR3 (ENSMMSG00000011411) #33 LETM1 (ENSMMSG00000011470) #34 NSD2 (ENSMMSG00000011600) #35 NELFA (ENSMMSG00000011766) #36 C4orf48 (ENSMMSG00000011837) #37 NAT8L (ENSMMSG00000011858) Bovidae ANCESTRAL SPECIES 18 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Caprinae ANCESTRAL SPECIES 13 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B Rambouillet Sheep MODERN SPECIES 22 PIGG (ENSOARG00020012800) #9 TMEM271 (ENSOARG00020012758) #10 PDE6B (ENSOARG00020012202) #11 ATP5ME (ENSOARG00020012147) #12 SLC49A3 (ENSOARG00020011735) #14 PCGF3 (ENSOARG00020011649) #15 CPLX1 (ENSOARG00020011580) #16 ENSOARG00020011547 #17 ENSOARG00020011415 #17 TMEM175 (ENSOARG00020011312) #18 DGKQ (ENSOARG00020011039) #19 SLC26A1 (ENSOARG00020011004) #20 IDUA (ENSOARG00020010816) #21 FGFRL1 (ENSOARG00020010713) #22 ENSOARG00020010628 SPON2 (ENSOARG00020010589) #24 CTBP1 (ENSOARG00020010402) #25 MAEA (ENSOARG00020009920) #26 UVSSA (ENSOARG00020009863) #27 NKX1-1 (ENSOARG00020009848) #28 SLBP (ENSOARG00020023875) #30 TMEM129 (ENSOARG00020023839) #32 ENSOARG00020023797 #31 FGFR3 (ENSOARG00020023492) #33 LETM1 (ENSOARG00020023387) #34 NSD2 (ENSOARG00020023148) #35 NELFA (ENSOARG00020023088) #36 C4orf48 (ENSOARG00020023033) #37 NAT8L (ENSOARG00020023001) Goat MODERN SPECIES 181 FGFRL1 (ENSCHIG00000000331) #22 Bovinae ANCESTRAL SPECIES 15 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102.e #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Bos ANCESTRAL SPECIES 15 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102.e #12 ENSGT01030000234625.C #14 ENSGT00990000212871 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Bos_b ANCESTRAL SPECIES 14 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102.e #12 ENSGT01030000234625.C #14 ENSGT00990000212871 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00390000001735.e.b ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Cow MODERN SPECIES 25 PIGG (ENSBTAG00000005964) #9 PDE6B (ENSBTAG00000017480) #11 ATP5ME (ENSBTAG00000017496) #12 SLC49A3 (ENSBTAG00000031553) #14 ENSBTAG00000050919 PCGF3 (ENSBTAG00000014017) #15 CPLX1 (ENSBTAG00000050808) #16 GAK (ENSBTAG00000019188) #17 TMEM175 (ENSBTAG00000018379) #18 DGKQ (ENSBTAG00000017240) #19 SLC26A1 (ENSBTAG00000007001) #20 IDUA (ENSBTAG00000007002) #21 FGFRL1 (ENSBTAG00000027464) #22 ENSBTAG00000049784 ENSBTAG00000002247 SPON2 (ENSBTAG00000004261) #24 CTBP1 (ENSBTAG00000008480) #25 MAEA (ENSBTAG00000012575) #26 UVSSA (ENSBTAG00000012577) #27 NKX1-1 (ENSBTAG00000048789) #28 ENSBTAG00000048974 SLBP (ENSBTAG00000001328) #30 TMEM129 (ENSBTAG00000011042) #32 TACC3 (ENSBTAG00000011044) #31 FGFR3 (ENSBTAG00000007164) #33 LETM1 (ENSBTAG00000020108) #34 NSD2 (ENSBTAG00000007986) #35 NELFA (ENSBTAG00000017921) #36 Hybrid Bos Indicus MODERN SPECIES 25 PIGG (ENSBIXG00005029315) #9 PDE6B (ENSBIXG00005007882) #11 SLC49A3 (ENSBIXG00005007916) #14 ENSBIXG00005007928 PCGF3 (ENSBIXG00005007941) #15 CPLX1 (ENSBIXG00005007949) #16 GAK (ENSBIXG00005008079) #17 TMEM175 (ENSBIXG00005008181) #18 DGKQ (ENSBIXG00005008250) #19 SLC26A1 (ENSBIXG00005006076) #20 IDUA (ENSBIXG00005008330) #21 FGFRL1 (ENSBIXG00005008365) #22 ENSBIXG00005008383 ENSBIXG00005005681 SPON2 (ENSBIXG00005006081) #24 CTBP1 (ENSBIXG00005008435) #25 MAEA (ENSBIXG00005008499) #26 UVSSA (ENSBIXG00005008522) #27 NKX1-1 (ENSBIXG00005008534) #28 ENSBIXG00005008565 #30 TMEM129 (ENSBIXG00005000225) #32 TACC3 (ENSBIXG00005008616) #31 FGFR3 (ENSBIXG00005008663) #33 LETM1 (ENSBIXG00005008685) #34 NSD2 (ENSBIXG00005008768) #35 NELFA (ENSBIXG00005008819) #36 C4orf48 (ENSBIXG00005006404) #37 Bos_a ANCESTRAL SPECIES 61 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102.e #12 ENSGT01030000234625.C #14 ENSGT00990000212871 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00990000210994 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT01100000263480.a.a.a.a.b.a.a.a.b.a.b ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.a #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 Domestic yak MODERN SPECIES 25 QDPR (ENSBGRG00000021798) CLRN2 (ENSBGRG00000021734) PIGG (ENSBGRG00000021520) #9 PDE6B (ENSBGRG00000020982) #11 ENSBGRG00000020937 #12 ENSBGRG00000020748 #14 ENSBGRG00000020706 ENSBGRG00000020684 ENSBGRG00000020591 #15 CPLX1 (ENSBGRG00000020565) #16 GAK (ENSBGRG00000020270) #17 TMEM175 (ENSBGRG00000020060) #18 DGKQ (ENSBGRG00000019777) #19 SLC26A1 (ENSBGRG00000019694) #20 IDUA (ENSBGRG00000019585) #21 FGFRL1 (ENSBGRG00000019493) #22 ENSBGRG00000019433 ENSBGRG00000019312 #23 ENSBGRG00000019257 ENSBGRG00000019141 #24 ENSBGRG00000018881 #25 MAEA (ENSBGRG00000018651) #26 UVSSA (ENSBGRG00000018583) #27 NKX1-1 (ENSBGRG00000018511) #28 ENSBGRG00000018496 ENSBGRG00000018427 SLBP (ENSBGRG00000018109) #30 TMEM129 (ENSBGRG00000017981) #32 TACC3 (ENSBGRG00000017804) #31 FGFR3 (ENSBGRG00000017575) #33 LETM1 (ENSBGRG00000017241) #34 Wild yak MODERN SPECIES 258 PCGF3 (ENSBMUG00000025603) #15 CPLX1 (ENSBMUG00000025590) #16 GAK (ENSBMUG00000025376) #17 TMEM175 (ENSBMUG00000024781) #18 DGKQ (ENSBMUG00000024763) #19 SLC26A1 (ENSBMUG00000024704) #20 IDUA (ENSBMUG00000024700) #21 FGFRL1 (ENSBMUG00000024665) #22 ENSBMUG00000024638 ENSBMUG00000024624 ENSBMUG00000024597 #24 CTBP1 (ENSBMUG00000024589) #25 SLC49A3 (ENSBMUG00000024573) #14 ENSBMUG00000024531 #12 PDE6B (ENSBMUG00000024518) #11 PIGG (ENSBMUG00000024492) #9 Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Chiroptera ANCESTRAL SPECIES 9 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.f #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Microchiroptera ANCESTRAL SPECIES 10 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858.f #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Greater horseshoe bat MODERN SPECIES 23 PIGG (ENSRFEG00010014207) #9 TMEM271 (ENSRFEG00010014170) #10 PDE6B (ENSRFEG00010013462) #11 ATP5ME (ENSRFEG00010013417) #12 MYL5 (ENSRFEG00010013249) #13 SLC49A3 (ENSRFEG00010013195) #14 PCGF3 (ENSRFEG00010013154) #15 ENSRFEG00010013089 #16 GAK (ENSRFEG00010012592) #17 TMEM175 (ENSRFEG00010012470) #18 DGKQ (ENSRFEG00010012388) #19 SLC26A1 (ENSRFEG00010012284) #20 IDUA (ENSRFEG00010012246) #21 FGFRL1 (ENSRFEG00010012188) #22 ENSRFEG00010012091 SPON2 (ENSRFEG00010012048) #24 CTBP1 (ENSRFEG00010011872) #25 MAEA (ENSRFEG00010011546) #26 UVSSA (ENSRFEG00010011482) #27 NKX1-1 (ENSRFEG00010011426) #28 FAM53A (ENSRFEG00010011394) #29 SLBP (ENSRFEG00010011166) #30 TMEM129 (ENSRFEG00010011065) #32 TACC3 (ENSRFEG00010010981) #31 FGFR3 (ENSRFEG00010010819) #33 LETM1 (ENSRFEG00010010660) #34 NSD2 (ENSRFEG00010010545) #35 NELFA (ENSRFEG00010010351) #36 C4orf48 (ENSRFEG00010010259) #37 Megabat MODERN SPECIES 6394 FGFRL1 (ENSPVAG00000004494) #22 Equus ANCESTRAL SPECIES 12 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Donkey MODERN SPECIES 22 XKR9 (ENSEASG00005020068) ENSEASG00005020061 ENSEASG00005020053 ENSEASG00005022554 #9 TMEM271 (ENSEASG00005025724) #10 PDE6B (ENSEASG00005022582) #11 MYL5 (ENSEASG00005022586) #13 SLC49A3 (ENSEASG00005022588) #14 PCGF3 (ENSEASG00005022593) #15 CPLX1 (ENSEASG00005036099) #16 GAK (ENSEASG00005022610) #17 TMEM175 (ENSEASG00005022646) #18 DGKQ (ENSEASG00005022651) #19 SLC26A1 (ENSEASG00005022673) #20 IDUA (ENSEASG00005022661) #21 FGFRL1 (ENSEASG00005022675) #22 RNF212 (ENSEASG00005036465) #23 ENSEASG00005022677 SPON2 (ENSEASG00005022679) #24 CTBP1 (ENSEASG00005022682) #25 MAEA (ENSEASG00005022693) #26 UVSSA (ENSEASG00005022702) #27 ENSEASG00005031810 SLBP (ENSEASG00005024705) #30 TMEM129 (ENSEASG00005022718) #32 TACC3 (ENSEASG00005022722) #31 FGFR3 (ENSEASG00005022725) #33 LETM1 (ENSEASG00005022727) #34 NSD2 (ENSEASG00005022729) #35 NELFA (ENSEASG00005022732) #36 C4orf48 (ENSEASG00005022733) #37 Horse MODERN SPECIES 22 PIGG (ENSECAG00000008635) #9 PDE6B (ENSECAG00000017337) #11 MYL5 (ENSECAG00000057119) #13 SLC49A3 (ENSECAG00000011353) #14 CPLX1 (ENSECAG00000010131) #16 GAK (ENSECAG00000023832) #17 ENSECAG00000055790 #17 TMEM175 (ENSECAG00000023326) #18 DGKQ (ENSECAG00000022309) #19 IDUA (ENSECAG00000019632) #21 SLC26A1 (ENSECAG00000022104) #20 FGFRL1 (ENSECAG00000018253) #22 ENSECAG00000052273 RNF212 (ENSECAG00000038589) #23 ENSECAG00000018022 SPON2 (ENSECAG00000016940) #24 CTBP1 (ENSECAG00000015999) #25 MAEA (ENSECAG00000013742) #26 UVSSA (ENSECAG00000012127) #27 NKX1-1 (ENSECAG00000031807) #28 SLBP (ENSECAG00000011689) #30 TMEM129 (ENSECAG00000011634) #32 TACC3 (ENSECAG00000011380) #31 FGFR3 (ENSECAG00000019533) #33 LETM1 (ENSECAG00000018569) #34 NSD2 (ENSECAG00000011661) #35 NELFA (ENSECAG00000010240) #36 Carnivora ANCESTRAL SPECIES 5 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Felidae ANCESTRAL SPECIES 4 ENSGT00910000144269 #9 ENSGT00730000114722 #10 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Panthera ANCESTRAL SPECIES 5 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429.x #35 ENSGT00940000157429.w.a #35 ENSGT00390000005342 #36 Panthera_a ANCESTRAL SPECIES 2 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429.x #35 ENSGT00940000157429.w.a #35 ENSGT00390000005342 #36 lion MODERN SPECIES 4 PIGG (ENSPLOG00000006367) #9 PDE6B (ENSPLOG00000006129) #11 ENSPLOG00000006074 #12 MYL5 (ENSPLOG00000006021) #13 SLC49A3 (ENSPLOG00000005939) #14 PCGF3 (ENSPLOG00000005870) #15 CPLX1 (ENSPLOG00000005834) #16 GAK (ENSPLOG00000005676) #17 TMEM175 (ENSPLOG00000005620) #18 DGKQ (ENSPLOG00000005591) #19 SLC26A1 (ENSPLOG00000005194) #20 IDUA (ENSPLOG00000005177) #21 FGFRL1 (ENSPLOG00000005150) #22 ENSPLOG00000005044 SPON2 (ENSPLOG00000005028) #24 CTBP1 (ENSPLOG00000004983) #25 MAEA (ENSPLOG00000004894) #26 UVSSA (ENSPLOG00000004830) #27 NKX1-1 (ENSPLOG00000004811) #28 SLBP (ENSPLOG00000004771) #30 TMEM129 (ENSPLOG00000004687) #32 TACC3 (ENSPLOG00000004666) #31 FGFR3 (ENSPLOG00000004622) #33 LETM1 (ENSPLOG00000004551) #34 NSD2 (ENSPLOG00000004484) #35 NELFA (ENSPLOG00000004443) #36 C4orf48 (ENSPLOG00000004418) #37 ENSPLOG00000004406 leopard MODERN SPECIES 200 PIGG (ENSPPRG00000013196) #9 PDE6B (ENSPPRG00000013416) #11 ATP5ME (ENSPPRG00000013442) #12 MYL5 (ENSPPRG00000013460) #13 SLC49A3 (ENSPPRG00000013673) #14 PCGF3 (ENSPPRG00000013737) #15 CPLX1 (ENSPPRG00000013763) #16 GAK (ENSPPRG00000014064) #17 TMEM175 (ENSPPRG00000014184) #18 DGKQ (ENSPPRG00000014376) #19 SLC26A1 (ENSPPRG00000014458) #20 IDUA (ENSPPRG00000014575) #21 FGFRL1 (ENSPPRG00000014614) #22 RNF212 (ENSPPRG00000014687) #23 ENSPPRG00000014721 SPON2 (ENSPPRG00000014785) #24 CTBP1 (ENSPPRG00000014866) #25 MAEA (ENSPPRG00000015029) #26 UVSSA (ENSPPRG00000016323) #27 SLBP (ENSPPRG00000016897) #30 TMEM129 (ENSPPRG00000017152) #32 TACC3 (ENSPPRG00000017349) #31 Cat MODERN SPECIES 235 PIGG (ENSFCAG00000008218) #9 TMEM271 (ENSFCAG00000044583) #10 PDE6B (ENSFCAG00000008224) #11 ATP5ME (ENSFCAG00000040473) #12 MYL5 (ENSFCAG00000018168) #13 SLC49A3 (ENSFCAG00000008227) #14 PCGF3 (ENSFCAG00000023633) #15 CPLX1 (ENSFCAG00000040659) #16 GAK (ENSFCAG00000008230) #17 TMEM175 (ENSFCAG00000012656) #18 DGKQ (ENSFCAG00000012659) #19 ENSFCAG00000026340 #20 IDUA (ENSFCAG00000004723) #21 FGFRL1 (ENSFCAG00000043643) #22 RNF212 (ENSFCAG00000046779) #23 ENSFCAG00000018929 SPON2 (ENSFCAG00000036077) #24 CTBP1 (ENSFCAG00000002265) #25 MAEA (ENSFCAG00000002950) #26 UVSSA (ENSFCAG00000002951) #27 NKX1-1 (ENSFCAG00000043543) #28 SLBP (ENSFCAG00000000169) #30 TMEM129 (ENSFCAG00000025439) #32 TACC3 (ENSFCAG00000000171) #31 FGFR3 (ENSFCAG00000018385) #33 LETM1 (ENSFCAG00000010616) #34 NSD2 (ENSFCAG00000037938) #35 NELFA (ENSFCAG00000010623) #36 CB1H4orf48 (ENSFCAG00000033658) #37 Caniformia ANCESTRAL SPECIES 7 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Caniformia_b ANCESTRAL SPECIES 5 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Mustelinae ANCESTRAL SPECIES 69 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Ferret MODERN SPECIES 334 ENSMPUG00000019116 PIGG (ENSMPUG00000011598) #9 PDE6B (ENSMPUG00000011427) #11 ATP5ME (ENSMPUG00000011414) #12 MYL5 (ENSMPUG00000011365) #13 SLC49A3 (ENSMPUG00000011330) #14 PCGF3 (ENSMPUG00000011322) #15 CPLX1 (ENSMPUG00000011316) #16 GAK (ENSMPUG00000011306) #17 TMEM175 (ENSMPUG00000011300) #18 DGKQ (ENSMPUG00000011237) #19 SLC26A1 (ENSMPUG00000011230) #20 IDUA (ENSMPUG00000011225) #21 FGFRL1 (ENSMPUG00000011220) #22 RNF212 (ENSMPUG00000011212) #23 ENSMPUG00000011191 SPON2 (ENSMPUG00000011185) #24 CTBP1 (ENSMPUG00000011182) #25 MAEA (ENSMPUG00000011174) #26 UVSSA (ENSMPUG00000011171) #27 ENSMPUG00000011168 FAM53A (ENSMPUG00000011145) #29 SLBP (ENSMPUG00000011139) #30 TMEM129 (ENSMPUG00000011130) #32 ENSMPUG00000011062 #31 FGFR3 (ENSMPUG00000011055) #33 LETM1 (ENSMPUG00000011045) #34 NSD2 (ENSMPUG00000011036) #35 NELFA (ENSMPUG00000011031) #36 American mink MODERN SPECIES 139 PIGG (ENSNVIG00000021944) #9 PDE6B (ENSNVIG00000022028) #11 ENSNVIG00000022069 #12 MYL5 (ENSNVIG00000022074) #13 MFSD7 (ENSNVIG00000022109) #14 PCGF3 (ENSNVIG00000022144) #15 CPLX1 (ENSNVIG00000022152) #16 GAK (ENSNVIG00000022170) #17 TMEM175 (ENSNVIG00000022216) #18 DGKQ (ENSNVIG00000022246) #19 IDUA (ENSNVIG00000022261) #21 SLC26A1 (ENSNVIG00000022268) #20 FGFRL1 (ENSNVIG00000022275) #22 RNF212 (ENSNVIG00000022299) #23 ENSNVIG00000022306 SPON2 (ENSNVIG00000022329) #24 CTBP1 (ENSNVIG00000022335) #25 ENSNVIG00000022343 MAEA (ENSNVIG00000022353) #26 UVSSA (ENSNVIG00000022388) #27 NKX1-1 (ENSNVIG00000022402) #28 FAM53A (ENSNVIG00000022407) #29 SLBP (ENSNVIG00000022417) #30 TMEM129 (ENSNVIG00000000024) #32 ENSNVIG00000000076 ENSNVIG00000000109 #33 ENSNVIG00000000117 #33 LETM1 (ENSNVIG00000000166) #34 Ursidae ANCESTRAL SPECIES 29 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494.e #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494.f #21 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00950000182932.B Giant Panda MODERN SPECIES 2177 ENSAMEG00000016846 #22 Ursus ANCESTRAL SPECIES 105 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT00390000015494.f #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00950000182932.B ENSGT00940000159015 American black bear MODERN SPECIES 501 ENSUAMG00000021292 #21 FGFRL1 (ENSUAMG00000021290) #22 ENSUAMG00000021289 SPON2 (ENSUAMG00000021287) #24 CTBP1 (ENSUAMG00000021286) #25 MAEA (ENSUAMG00000021284) #26 UVSSA (ENSUAMG00000021283) #27 Canidae ANCESTRAL SPECIES 21 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000165250 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00390000012430 ENSGT00990000204159 ENSGT00390000001577 ENSGT00940000154965.B ENSGT00940000158402 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 ENSGT00950000183137.b.a Canis_lupus ANCESTRAL SPECIES 23 ENSGT00910000144269 #9 ENSGT00940000156471.a #11 ENSGT00390000005102.b #12 ENSGT00940000163023 #13 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000165250 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000153137.a.a.f ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00390000012430 ENSGT00390000001577 ENSGT00940000154965.B ENSGT00940000163089.b.l.a.b ENSGT00940000158402 ENSGT00940000159756 ENSGT00940000158985 ENSGT00940000157235 ENSGT00940000160460 Dog MODERN SPECIES 22 PIGG (ENSCAFG00845001730) #9 PDE6B (ENSCAFG00845001610) #11 ENSCAFG00845001571 #12 MYL5 (ENSCAFG00845001550) #13 SLC49A3 (ENSCAFG00845001507) #14 PCGF3 (ENSCAFG00845001449) #15 CPLX1 (ENSCAFG00845001412) #16 GAK (ENSCAFG00845001290) #17 TMEM175 (ENSCAFG00845001202) #18 DGKQ (ENSCAFG00845001113) #19 IDUA (ENSCAFG00845001029) #21 FGFRL1 (ENSCAFG00845000982) #22 ENSCAFG00845000968 #20 ENSCAFG00845000939 #23 TMED11 (ENSCAFG00845000919) ENSCAFG00845000897 ENSCAFG00845000883 #24 ENSCAFG00845000771 #25 ENSCAFG00845000722 NCAPG (ENSCAFG00845000445) LCORL (ENSCAFG00845000382) ENSCAFG00845000335 SLIT2 (ENSCAFG00845010097) ENSCAFG00845010003 PACRGL (ENSCAFG00845009809) KCNIP4 (ENSCAFG00845009227) ADGRA3 (ENSCAFG00845008840) Dingo MODERN SPECIES 138 PIGG (ENSCAFG00020026986) #9 PDE6B (ENSCAFG00020027009) #11 MYL5 (ENSCAFG00020027016) #13 SLC49A3 (ENSCAFG00020027018) #14 PCGF3 (ENSCAFG00020027024) #15 CPLX1 (ENSCAFG00020027027) #16 GAK (ENSCAFG00020027028) #17 TMEM175 (ENSCAFG00020027031) #18 DGKQ (ENSCAFG00020027034) #19 IDUA (ENSCAFG00020027044) #21 SLC26A1 (ENSCAFG00020027054) #20 FGFRL1 (ENSCAFG00020027059) #22 ENSCAFG00020027061 ENSCAFG00020027063 ENSCAFG00020027065 SPON2 (ENSCAFG00020027066) #24 CTBP1 (ENSCAFG00020027072) #25 DCAF16 (ENSCAFG00020027085) ENSCAFG00020027087 NCAPG (ENSCAFG00020027090) ENSCAFG00020027097 ENSCAFG00020027105 SLIT2 (ENSCAFG00020027191) ENSCAFG00020027235 PACRGL (ENSCAFG00020027236) KCNIP4 (ENSCAFG00020027237) ADGRA3 (ENSCAFG00020027238) Red fox MODERN SPECIES 1 PIGG (ENSVVUG00000011707) #9 ENSVVUG00000011717 PDE6B (ENSVVUG00000011796) #11 MYL5 (ENSVVUG00000012929) #13 SLC49A3 (ENSVVUG00000012938) #14 PCGF3 (ENSVVUG00000012951) #15 CPLX1 (ENSVVUG00000012960) #16 GAK (ENSVVUG00000012981) #17 ENSVVUG00000013001 TMEM175 (ENSVVUG00000013004) #18 DGKQ (ENSVVUG00000013007) #19 SLC26A1 (ENSVVUG00000013017) #20 IDUA (ENSVVUG00000013021) #21 FGFRL1 (ENSVVUG00000013026) #22 ENSVVUG00000013034 SPON2 (ENSVVUG00000013053) #24 CTBP1 (ENSVVUG00000013060) #25 DCAF16 (ENSVVUG00000013103) ENSVVUG00000013105 NCAPG (ENSVVUG00000013106) LCORL (ENSVVUG00000013122) SLIT2 (ENSVVUG00000013236) PACRGL (ENSVVUG00000013266) KCNIP4 (ENSVVUG00000013290) ADGRA3 (ENSVVUG00000013329) GBA3 (ENSVVUG00000013354) ENSVVUG00000013361 PPARGC1A (ENSVVUG00000013365) ENSVVUG00000013388 Atlantogenata ANCESTRAL SPECIES 108 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Xenarthra ANCESTRAL SPECIES 873 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 Armadillo MODERN SPECIES 3270 ENSDNOG00000037410 GAK (ENSDNOG00000024761) #17 ENSDNOG00000035166 TMEM175 (ENSDNOG00000044341) #18 DGKQ (ENSDNOG00000045548) #19 SLC26A1 (ENSDNOG00000033231) #20 IDUA (ENSDNOG00000005834) #21 FGFRL1 (ENSDNOG00000040841) #22 Afrotheria ANCESTRAL SPECIES 135 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Afrotheria_a ANCESTRAL SPECIES 137 ENSGT00940000156471.a #11 ENSGT00390000005102 #12 ENSGT01030000234625.C #14 ENSGT00940000158395 #15 ENSGT00950000182938.b.b.b.a #16 ENSGT00940000159527 #17 ENSGT00390000015667 #18 ENSGT00940000159492 #19 ENSGT01100000263544.c.a.a.b #20 ENSGT00390000015494 #21 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00390000000377 #27 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.a.b.a #34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Elephant MODERN SPECIES 164 MSX1 (ENSLAFG00000013862) CYTL1 (ENSLAFG00000014417) STK32B (ENSLAFG00000015017) EVC2 (ENSLAFG00000006990) EVC (ENSLAFG00000010305) PDE6B (ENSLAFG00000009245) #11 ATP5ME (ENSLAFG00000026313) #12 ENSLAFG00000027944 #14 PCGF3 (ENSLAFG00000003899) #15 CPLX1 (ENSLAFG00000025704) #16 GAK (ENSLAFG00000011882) #17 TMEM175 (ENSLAFG00000004166) #18 DGKQ (ENSLAFG00000004169) #19 SLC26A1 (ENSLAFG00000012880) #20 IDUA (ENSLAFG00000012872) #21 FGFRL1 (ENSLAFG00000012522) #22 ENSLAFG00000020574 SPON2 (ENSLAFG00000031358) #24 CTBP1 (ENSLAFG00000016498) #25 MAEA (ENSLAFG00000001960) #26 UVSSA (ENSLAFG00000013335) #27 ENSLAFG00000025171 #28 FAM53A (ENSLAFG00000000267) #29 SLBP (ENSLAFG00000012933) #30 TMEM129 (ENSLAFG00000021484) #32 ENSLAFG00000005224 #31 FGFR3 (ENSLAFG00000012619) #33 LETM1 (ENSLAFG00000022179) #34 NSD2 (ENSLAFG00000008162) #35 NELFA (ENSLAFG00000008168) #36 C4orf48 (ENSLAFG00000029945) #37 Hyrax MODERN SPECIES 2023 ENSPCAG00000004023 #22 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000159579 ENSGT00390000016110 ENSGT00940000155108 ENSGT00940000158157 ENSGT00940000155980.C ENSGT00390000005656 ENSGT00940000159592 ENSGT00940000161863.b ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00510000047107.B ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00390000016110 ENSGT00940000155108 ENSGT00940000158157 ENSGT00940000155980.C ENSGT00390000005656 ENSGT00940000159592 ENSGT01030000234575.d.d.b ENSGT00940000161863.b ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00510000047107.B ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000158459.d ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Diprotodontia ANCESTRAL SPECIES 10 ENSGT00390000016110 ENSGT00940000155108 ENSGT00940000158157 ENSGT00940000155980.C ENSGT00390000005656 ENSGT00940000159592 ENSGT01030000234575.d.d.b ENSGT00940000161863.b ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00510000047107.B ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000158459.d ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00390000016110 ENSGT00940000155108 ENSGT00940000158157 ENSGT00940000155980.C ENSGT00390000005656 ENSGT00940000159592 ENSGT01030000234575.d.d.b ENSGT00940000161863.b ENSGT00940000158971 ENSGT00940000160491 ENSGT00940000157346 ENSGT00940000159492 #19 ENSGT00390000015494 #21 ENSGT01100000263544.c.a.a.b #20 ENSGT00510000047107.B ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000158459.d ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Common wonbat MODERN SPECIES 1054 DQX1 (ENSVURG00010020235) AUP1 (ENSVURG00010020241) HTRA2 (ENSVURG00010020264) LOXL3 (ENSVURG00010020312) DOK1 (ENSVURG00010020350) M1AP (ENSVURG00010020363) SEMA4F (ENSVURG00010020381) ENSVURG00010020429 ADAM33 (ENSVURG00010020436) ENSVURG00010020444 ATRN (ENSVURG00010020517) DGKQ (ENSVURG00010021140) #19 IDUA (ENSVURG00010021152) #21 SLC26A1 (ENSVURG00010021160) #20 ENSVURG00010021170 FGFRL1 (ENSVURG00010021177) #22 ENSVURG00010021189 #24 CTBP1 (ENSVURG00010021201) #25 MAEA (ENSVURG00010021222) #26 ENSVURG00010021231 NKX1-1 (ENSVURG00010021242) #28 FAM53A (ENSVURG00010021247) #29 SLBP (ENSVURG00010021255) #30 TMEM129 (ENSVURG00010021261) #32 ENSVURG00010021263 #31 ENSVURG00010021279 FGFR3 (ENSVURG00010021287) #33 ENSVURG00010021331 ##34 NSD2 (ENSVURG00010021411) #35 ENSVURG00010021490 ENSVURG00010021495 #36 koala MODERN SPECIES 108 AUP1 (ENSPCIG00000006059) HTRA2 (ENSPCIG00000006343) LOXL3 (ENSPCIG00000006347) DOK1 (ENSPCIG00000006351) M1AP (ENSPCIG00000006355) SEMA4F (ENSPCIG00000006358) ENSPCIG00000006362 ENSPCIG00000006364 ADAM33 (ENSPCIG00000006366) ENSPCIG00000006370 ATRN (ENSPCIG00000006372) DGKQ (ENSPCIG00000030233) #19 IDUA (ENSPCIG00000030238) #21 SLC26A1 (ENSPCIG00000030244) #20 ENSPCIG00000008549 FGFRL1 (ENSPCIG00000005073) #22 Wallaby MODERN SPECIES 3404 FGFRL1 (ENSMEUG00000000945) #22 Tasmanian devil MODERN SPECIES 5 AUP1 (ENSSHAG00000016825) HTRA2 (ENSSHAG00000027709) LOXL3 (ENSSHAG00000026705) DOK1 (ENSSHAG00000031994) M1AP (ENSSHAG00000016585) ENSSHAG00000016505 ENSSHAG00000022636 ENSSHAG00000029988 ENSSHAG00000016201 ENSSHAG00000029650 ENSSHAG00000015651 ENSSHAG00000014960 #19 SLC26A1 (ENSSHAG00000014844) #20 IDUA (ENSSHAG00000014613) #21 ENSSHAG00000014584 FGFRL1 (ENSSHAG00000013968) #22 ENSSHAG00000012564 #23 ENSSHAG00000012404 SPON2 (ENSSHAG00000012328) #24 CTBP1 (ENSSHAG00000010717) #25 MAEA (ENSSHAG00000006152) #26 ENSSHAG00000003641 FAM53A (ENSSHAG00000014457) #29 SLBP (ENSSHAG00000025869) #30 TMEM129 (ENSSHAG00000013825) #32 ENSSHAG00000013631 #31 ENSSHAG00000027667 FGFR3 (ENSSHAG00000009751) #33 ENSSHAG00000008701 ##34 NSD2 (ENSSHAG00000006750) #35 NELFA (ENSSHAG00000006075) #36 Opossum MODERN SPECIES 4 DQX1 (ENSMODG00000004879) AUP1 (ENSMODG00000046009) HTRA2 (ENSMODG00000004817) LOXL3 (ENSMODG00000004785) DOK1 (ENSMODG00000004738) M1AP (ENSMODG00000004692) SEMA4F (ENSMODG00000004678) ENSMODG00000004661 ADAM33 (ENSMODG00000004649) ENSMODG00000004582 ATRN (ENSMODG00000004575) DGKQ (ENSMODG00000004482) #19 SLC26A1 (ENSMODG00000004455) #20 IDUA (ENSMODG00000038782) #21 ENSMODG00000042625 FGFRL1 (ENSMODG00000004433) #22 ENSMODG00000027834 #23 ENSMODG00000004399 SPON2 (ENSMODG00000004394) #24 CTBP1 (ENSMODG00000004380) #25 MAEA (ENSMODG00000004354) #26 ENSMODG00000004336 FAM53A (ENSMODG00000004313) #29 SLBP (ENSMODG00000004304) #30 TMEM129 (ENSMODG00000004290) #32 ENSMODG00000004284 #31 FGFR3 (ENSMODG00000004268) #33 ENSMODG00000004184 ENSMODG00000004250 ##34 NSD2 (ENSMODG00000004162) #35 NELFA (ENSMODG00000004110) #36 Platypus MODERN SPECIES 9 SMYD1 (ENSOANG00000050107) ENSOANG00000050839 ENSOANG00000010356 ENSOANG00000046366 RMND5A (ENSOANG00000010358) ##26 RNF103 (ENSOANG00000010359) CHMP3 (ENSOANG00000010360) KDM3A (ENSOANG00000010361) REEP1 (ENSOANG00000044136) MRPL35 (ENSOANG00000013423) IMMT (ENSOANG00000050014) PTCD3 (ENSOANG00000012383) POLR1A (ENSOANG00000012384) ST3GAL5 (ENSOANG00000030211) ATOH8 (ENSOANG00000050306) FGFRL1 (ENSOANG00000043558) #22 ENSOANG00000022347 #23 ENSOANG00000000241 SPON2 (ENSOANG00000000243) #24 CTBP1 (ENSOANG00000000244) #25 MAEA (ENSOANG00000000247) #26 ENSOANG00000000248 NKX1-1 (ENSOANG00000037886) #28 FAM53A (ENSOANG00000014819) #29 SLBP (ENSOANG00000014243) #30 TMEM129 (ENSOANG00000009785) #32 SMOX (ENSOANG00000011041) ADRA1D (ENSOANG00000041408) ENSOANG00000000428 ENSOANG00000012869 LRRTM1 (ENSOANG00000002561) Sauria ANCESTRAL SPECIES 6 ENSGT00940000156114 ENSGT00940000161244 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Archelosauria ANCESTRAL SPECIES 4 ENSGT00950000185620 ENSGT00940000168371 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Archosauria ANCESTRAL SPECIES 1 ENSGT00940000161244 ENSGT00950000185620 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Aves ANCESTRAL SPECIES 3 ENSGT00690000102286 ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Neognathae ANCESTRAL SPECIES 5 ENSGT00690000102286.c.a.b ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Neognathae_b ANCESTRAL SPECIES 4 ENSGT00690000102286.c.a.b ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Passeriformes ANCESTRAL SPECIES 4 ENSGT00690000102286.c.a.b ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Great tit MODERN SPECIES 23 ENSPMJG00000016801 ENSPMJG00000016800 ENSPMJG00000016798 ENSPMJG00000016797 ENSPMJG00000016796 RMND5A (ENSPMJG00000016795) ##26 RNF103 (ENSPMJG00000016794) CHMP3 (ENSPMJG00000016793) KDM3A (ENSPMJG00000016792) REEP1 (ENSPMJG00000016790) MRPL35 (ENSPMJG00000016789) IMMT (ENSPMJG00000016788) PTCD3 (ENSPMJG00000016786) POLR1A (ENSPMJG00000016785) ST3GAL5 (ENSPMJG00000016784) FGFRL1 (ENSPMJG00000016781) #22 RNF212 (ENSPMJG00000016778) #23 ENSPMJG00000016777 SPON2 (ENSPMJG00000016776) #24 CTBP1 (ENSPMJG00000016774) #25 MAEA (ENSPMJG00000016773) #26 ENSPMJG00000016772 NKX1-1 (ENSPMJG00000016771) #28 FAM53A (ENSPMJG00000016765) #29 SLBP (ENSPMJG00000016763) #30 TMEM129 (ENSPMJG00000016762) #32 TACC3 (ENSPMJG00000016761) #31 ENSPMJG00000016756 FGFR3 (ENSPMJG00000016755) #33 ENSPMJG00000016753 ##34 NELFA (ENSPMJG00000016751) #36 Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00690000102286.c.a.b ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00690000102286.c.a.b ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Medium ground finch MODERN SPECIES 182 FABP1 (ENSGFOG00000002697) SMYD1 (ENSGFOG00000002709) ENSGFOG00000002755 ENSGFOG00000002792 ENSGFOG00000002994 RMND5A (ENSGFOG00000003019) ##26 RNF103 (ENSGFOG00000003025) CHMP3 (ENSGFOG00000003029) KDM3A (ENSGFOG00000003058) REEP1 (ENSGFOG00000003087) MRPL35 (ENSGFOG00000003093) IMMT (ENSGFOG00000003111) PTCD3 (ENSGFOG00000003135) POLR1A (ENSGFOG00000003407) ST3GAL5 (ENSGFOG00000004535) FGFRL1 (ENSGFOG00000004547) #22 ENSGFOG00000004571 SPON2 (ENSGFOG00000004594) #24 Passeroidea ANCESTRAL SPECIES 4 ENSGT00690000102286.c.a.b ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT01080000257700 ENSGT00950000183167.b ##34 Zebra finch MODERN SPECIES 25 ENSTGUG00000029052 ENSTGUG00000027703 ENSTGUG00000010847 CD8A (ENSTGUG00000010841) RMND5A (ENSTGUG00000010838) ##26 RNF103 (ENSTGUG00000010834) CHMP3 (ENSTGUG00000010820) KDM3A (ENSTGUG00000010803) REEP1 (ENSTGUG00000010801) MRPL35 (ENSTGUG00000010799) IMMT (ENSTGUG00000010776) PTCD3 (ENSTGUG00000010760) POLR1A (ENSTGUG00000010704) ST3GAL5 (ENSTGUG00000010696) ATOH8 (ENSTGUG00000010695) FGFRL1 (ENSTGUG00000010690) #22 RNF212 (ENSTGUG00000010685) #23 ENSTGUG00000010674 SPON2 (ENSTGUG00000010671) #24 CTBP1 (ENSTGUG00000010662) #25 MAEA (ENSTGUG00000010646) #26 ENSTGUG00000010640 NKX1-1 (ENSTGUG00000029299) #28 FAM53A (ENSTGUG00000010633) #29 SLBP (ENSTGUG00000010626) #30 ENSTGUG00000026053 #30 TMEM129 (ENSTGUG00000010623) #32 TACC3 (ENSTGUG00000010612) #31 FGFR3 (ENSTGUG00000010583) #33 ENSTGUG00000010578 ENSTGUG00000010569 ##34 Common canary MODERN SPECIES 2 SMYD1 (ENSSCAG00000014754) ENSSCAG00000014758 ENSSCAG00000014760 ENSSCAG00000014778 RMND5A (ENSSCAG00000014814) ##26 RNF103 (ENSSCAG00000014823) CHMP3 (ENSSCAG00000014828) KDM3A (ENSSCAG00000014840) REEP1 (ENSSCAG00000014857) MRPL35 (ENSSCAG00000014892) IMMT (ENSSCAG00000014903) PTCD3 (ENSSCAG00000014937) POLR1A (ENSSCAG00000014945) ST3GAL5 (ENSSCAG00000014951) ENSSCAG00000014958 FGFRL1 (ENSSCAG00000014969) #22 ENSSCAG00000014981 SPON2 (ENSSCAG00000014992) #24 CTBP1 (ENSSCAG00000015001) #25 MAEA (ENSSCAG00000015016) #26 ENSSCAG00000015024 NKX1-1 (ENSSCAG00000015033) #28 FAM53A (ENSSCAG00000015042) #29 SLBP (ENSSCAG00000015046) #30 ENSSCAG00000015050 #30 TMEM129 (ENSSCAG00000015058) #32 TACC3 (ENSSCAG00000015066) #31 FGFR3 (ENSSCAG00000015145) #33 ENSSCAG00000015296 ENSSCAG00000015304 ##34 NSD2 (ENSSCAG00000015307) #35 Flycatcher MODERN SPECIES 22 SMYD1 (ENSFALG00000026241) ENSFALG00000014895 ENSFALG00000026255 ENSFALG00000026719 CD8A (ENSFALG00000010165) RMND5A (ENSFALG00000010158) ##26 RNF103 (ENSFALG00000010155) CHMP3 (ENSFALG00000010145) KDM3A (ENSFALG00000010109) REEP1 (ENSFALG00000026836) MRPL35 (ENSFALG00000025523) IMMT (ENSFALG00000010092) PTCD3 (ENSFALG00000010089) POLR1A (ENSFALG00000010082) ST3GAL5 (ENSFALG00000010076) FGFRL1 (ENSFALG00000010071) #22 RNF212 (ENSFALG00000026442) #23 ENSFALG00000010064 SPON2 (ENSFALG00000010062) #24 CTBP1 (ENSFALG00000010053) #25 MAEA (ENSFALG00000010037) #26 ENSFALG00000010020 ENSFALG00000024515 FAM53A (ENSFALG00000010014) #29 SLBP (ENSFALG00000010003) #30 ENSFALG00000009994 #30 TMEM129 (ENSFALG00000009990) #32 TACC3 (ENSFALG00000009974) #31 FGFR3 (ENSFALG00000009957) #33 ENSFALG00000009940 ##34 NSD2 (ENSFALG00000009928) #35 Neognathae_c ANCESTRAL SPECIES 3 ENSGT00940000161244 ENSGT00610000087427 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Kakapo MODERN SPECIES 24 ENSSHBG00005020561 ENSSHBG00005020563 ENSSHBG00005020565 ENSSHBG00005020569 RMND5A (ENSSHBG00005020571) ##26 RNF103 (ENSSHBG00005020572) CHMP3 (ENSSHBG00005020574) KDM3A (ENSSHBG00005020576) REEP1 (ENSSHBG00005020593) MRPL35 (ENSSHBG00005020600) IMMT (ENSSHBG00005020608) PTCD3 (ENSSHBG00005020614) POLR1A (ENSSHBG00005000992) ST3GAL5 (ENSSHBG00005001046) ATOH8 (ENSSHBG00005001047) FGFRL1 (ENSSHBG00005013918) #22 ENSSHBG00005013933 SPON2 (ENSSHBG00005013942) #24 CTBP1 (ENSSHBG00005013962) #25 MAEA (ENSSHBG00005014007) #26 ENSSHBG00005014033 ENSSHBG00005014047 NKX1-1 (ENSSHBG00005014065) #28 FAM53A (ENSSHBG00005014082) #29 SLBP (ENSSHBG00005014090) #30 ENSSHBG00005014102 #30 TMEM129 (ENSSHBG00005014117) #32 TACC3 (ENSSHBG00005014126) #31 FGFR3 (ENSSHBG00005014171) #33 ENSSHBG00005014181 ##34 NSD2 (ENSSHBG00005014199) #35 Golden eagle MODERN SPECIES ENSACCG00020000074 CD8A (ENSACCG00020000075) RMND5A (ENSACCG00020000076) ##26 RNF103 (ENSACCG00020000077) CHMP3 (ENSACCG00020000078) ENSACCG00020000079 KDM3A (ENSACCG00020000080) REEP1 (ENSACCG00020000081) ENSACCG00020000082 MRPL35 (ENSACCG00020000083) IMMT (ENSACCG00020000084) PTCD3 (ENSACCG00020000085) POLR1A (ENSACCG00020000087) ST3GAL5 (ENSACCG00020000088) ATOH8 (ENSACCG00020000089) FGFRL1 (ENSACCG00020000090) #22 ENSACCG00020000091 SPON2 (ENSACCG00020000092) #24 CTBP1 (ENSACCG00020000093) #25 MAEA (ENSACCG00020000094) #26 ENSACCG00020000095 NKX1-1 (ENSACCG00020000096) #28 FAM53A (ENSACCG00020000097) #29 SLBP (ENSACCG00020000098) #30 ENSACCG00020000099 #30 TMEM129 (ENSACCG00020000100) #32 TACC3 (ENSACCG00020000101) #31 FGFR3 (ENSACCG00020000102) #33 ENSACCG00020000103 ##34 NSD2 (ENSACCG00020000104) #35 NELFA (ENSACCG00020000106) #36 Galloanserae ANCESTRAL SPECIES 5 ENSGT00610000087427 ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Anatidae ANCESTRAL SPECIES 2 ENSGT00610000087427 ENSGT00940000160750.a.b.a ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Pink-footed goose MODERN SPECIES 7 ENSABRG00000013579 ENSABRG00000013574 ENSABRG00000013572 ENSABRG00000013569 RMND5A (ENSABRG00000013477) ##26 RNF103 (ENSABRG00000013467) CHMP3 (ENSABRG00000013460) KDM3A (ENSABRG00000012928) REEP1 (ENSABRG00000012866) MRPL35 (ENSABRG00000012857) IMMT (ENSABRG00000012543) PTCD3 (ENSABRG00000012503) POLR1A (ENSABRG00000009609) ST3GAL5 (ENSABRG00000009151) ATOH8 (ENSABRG00000009126) FGFRL1 (ENSABRG00000009111) #22 RNF212 (ENSABRG00000009079) #23 ENSABRG00000009069 SPON2 (ENSABRG00000009053) #24 CTBP1 (ENSABRG00000009016) #25 MAEA (ENSABRG00000008991) #26 ENSABRG00000008962 NKX1-1 (ENSABRG00000008955) #28 FAM53A (ENSABRG00000008927) #29 SLBP (ENSABRG00000008914) #30 ENSABRG00000008878 #30 TMEM129 (ENSABRG00000008871) #32 TACC3 (ENSABRG00000008855) #31 ENSABRG00000008817 FGFR3 (ENSABRG00000008800) #33 ENSABRG00000008782 ##34 Duck MODERN SPECIES 22 ENSAPLG00000002674 ENSAPLG00000025247 ENSAPLG00000027278 ENSAPLG00000002745 RMND5A (ENSAPLG00000002419) ##26 RNF103 (ENSAPLG00000002107) ENSAPLG00000028865 CHMP3 (ENSAPLG00000001090) KDM3A (ENSAPLG00000004274) REEP1 (ENSAPLG00000004849) IMMT (ENSAPLG00000005014) PTCD3 (ENSAPLG00000005086) POLR1A (ENSAPLG00000013871) ST3GAL5 (ENSAPLG00000014680) ATOH8 (ENSAPLG00000022131) FGFRL1 (ENSAPLG00000014983) #22 ENSAPLG00000019361 ENSAPLG00000019372 ENSAPLG00000015003 SPON2 (ENSAPLG00000015017) #24 CTBP1 (ENSAPLG00000015635) #25 MAEA (ENSAPLG00000015852) #26 ENSAPLG00000015894 ENSAPLG00000021364 FAM53A (ENSAPLG00000015975) #29 SLBP (ENSAPLG00000015989) #30 TMEM129 (ENSAPLG00000016182) #32 TACC3 (ENSAPLG00000016198) #31 FGFR3 (ENSAPLG00000016333) #33 ENSAPLG00000003508 ##34 NSD2 (ENSAPLG00000003770) #35 Phasianidae ANCESTRAL SPECIES 2 ENSGT00510000048998 ENSGT00940000156588.f.a.b.b.b.a ENSGT00940000156588.e ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313.n ENSGT00390000002313.m.a ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880.j #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Japanese quail MODERN SPECIES 22 ENSCJPG00005006238 ENSCJPG00005006232 ENSCJPG00005006218 ENSCJPG00005006214 RMND5A (ENSCJPG00005006195) ##26 RNF103 (ENSCJPG00005006194) CHMP3 (ENSCJPG00005006193) KDM3A (ENSCJPG00005006188) REEP1 (ENSCJPG00005006151) MRPL35 (ENSCJPG00005006147) IMMT (ENSCJPG00005006143) PTCD3 (ENSCJPG00005006127) POLR1A (ENSCJPG00005004833) ST3GAL5 (ENSCJPG00005004831) ATOH8 (ENSCJPG00005004828) FGFRL1 (ENSCJPG00005004823) #22 RNF212 (ENSCJPG00005004815) #23 ENSCJPG00005004814 SPON2 (ENSCJPG00005004812) #24 CTBP1 (ENSCJPG00005004796) #25 MAEA (ENSCJPG00005004779) #26 ENSCJPG00005004776 NKX1-1 (ENSCJPG00005004773) #28 FAM53A (ENSCJPG00005004768) #29 SLBP (ENSCJPG00005004762) #30 ENSCJPG00005004758 #30 TMEM129 (ENSCJPG00005004755) #32 TACC3 (ENSCJPG00005004752) #31 ENSCJPG00005001291 #33 ENSCJPG00005001087 ##34 NSD2 (ENSCJPG00005000902) #35 Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00940000156588.f.a.b.b.b.a ENSGT00940000156588.e ENSGT00940000153203.A.b ##26 ENSGT00950000185665 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313.n ENSGT00390000002313.m.a ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000008738.t #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880.j #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Chicken MODERN SPECIES 33 ENSGALG00010017047 ENSGALG00010017027 CD8A (ENSGALG00010016963) RMND5A (ENSGALG00010019218) ##26 RMND5A (ENSGALG00010017017) RNF103 (ENSGALG00010016984) CHMP3 (ENSGALG00010016969) KDM3A (ENSGALG00010016966) REEP1 (ENSGALG00010017817) MRPL35 (ENSGALG00010017807) IMMT (ENSGALG00010017789) PTCD3 (ENSGALG00010017770) POLR1A (ENSGALG00010017763) ST3GAL5 (ENSGALG00010017751) ATOH8 (ENSGALG00010017718) FGFRL1 (ENSGALG00010017706) #22 RNF212 (ENSGALG00010017689) #23 TMED11 (ENSGALG00010017682) SPON2 (ENSGALG00010017676) #24 CTBP1 (ENSGALG00010017665) #25 MAEA (ENSGALG00010017646) #26 UVSSA (ENSGALG00010016107) NKX1-1 (ENSGALG00010016036) #28 FAM53A (ENSGALG00010016631) #29 SLBP (ENSGALG00010016616) #30 ENSGALG00010016603 #30 TMEM129 (ENSGALG00010016592) #32 TACC3 (ENSGALG00010016211) #31 FGFR3 (ENSGALG00010016940) #33 ENSGALG00010016933 LETM1 (ENSGALG00010016924) ##34 Turkey MODERN SPECIES 24 ENSMGAG00000019424 ENSMGAG00000017597 #30 ENSMGAG00000013078 #32 ENSMGAG00000013085 #30 ENSMGAG00000013089 #29 ENSMGAG00000013092 ENSMGAG00000013093 #26 ENSMGAG00000013096 #25 ENSMGAG00000013103 ENSMGAG00000013099 #24 ENSMGAG00000020649 ENSMGAG00000013106 #22 ENSMGAG00000013108 ENSMGAG00000013109 ENSMGAG00000017642 ENSMGAG00000013111 ENSMGAG00000013130 ENSMGAG00000013124 ENSMGAG00000021261 ENSMGAG00000020739 ENSMGAG00000013138 MRPL35 (ENSMGAG00000022253) ENSMGAG00000013154 KDM3A (ENSMGAG00000013141) RNF103 (ENSMGAG00000013155) ENSMGAG00000013158 ##26 ENSMGAG00000018735 African ostrich MODERN SPECIES 1016 ENSSCUG00000015364 ENSSCUG00000015368 ENSSCUG00000015370 CD8A (ENSSCUG00000015372) RMND5A (ENSSCUG00000015375) ##26 RNF103 (ENSSCUG00000015380) CHMP3 (ENSSCUG00000015384) KDM3A (ENSSCUG00000015389) REEP1 (ENSSCUG00000015398) MRPL35 (ENSSCUG00000015404) IMMT (ENSSCUG00000015420) PTCD3 (ENSSCUG00000015435) POLR1A (ENSSCUG00000015443) ST3GAL5 (ENSSCUG00000015448) ENSSCUG00000015450 FGFRL1 (ENSSCUG00000015454) #22 ENSSCUG00000015455 SPON2 (ENSSCUG00000015460) #24 CTBP1 (ENSSCUG00000015468) #25 MAEA (ENSSCUG00000015471) #26 ENSSCUG00000015472 FAM53A (ENSSCUG00000015478) #29 SLBP (ENSSCUG00000015479) #30 ENSSCUG00000015480 #30 TMEM129 (ENSSCUG00000015481) #32 TACC3 (ENSSCUG00000015483) #31 ENSSCUG00000015487 FGFR3 (ENSSCUG00000015489) #33 ENSSCUG00000015494 ##34 NSD2 (ENSSCUG00000015496) #35 NELFA (ENSSCUG00000015506) #36 Australian saltwater crocodile MODERN SPECIES 65 FABP1 (ENSCPRG00005000355) SMYD1 (ENSCPRG00005000368) ZMAT1 (ENSCPRG00005000424) ENSCPRG00005000430 ENSCPRG00005000438 RMND5A (ENSCPRG00005000495) ##26 RNF103 (ENSCPRG00005000502) CHMP3 (ENSCPRG00005000508) KDM3A (ENSCPRG00005000515) REEP1 (ENSCPRG00005000543) MRPL35 (ENSCPRG00005000548) IMMT (ENSCPRG00005000573) PTCD3 (ENSCPRG00005000603) POLR1A (ENSCPRG00005000706) ST3GAL5 (ENSCPRG00005001127) FGFRL1 (ENSCPRG00005001162) #22 ENSCPRG00005001189 SPON2 (ENSCPRG00005001192) #24 CTBP1 (ENSCPRG00005001249) #25 MAEA (ENSCPRG00005001284) #26 ENSCPRG00005001306 FAM53A (ENSCPRG00005001335) #29 SLBP (ENSCPRG00005001341) #30 ENSCPRG00005001347 #30 TMEM129 (ENSCPRG00005001354) #32 TACC3 (ENSCPRG00005001402) #31 FGFR3 (ENSCPRG00005001439) #33 ENSCPRG00005001480 ##34 NSD2 (ENSCPRG00005001494) #35 NELFA (ENSCPRG00005001509) #36 C4orf48 (ENSCPRG00005001551) #37 Cryptodira ANCESTRAL SPECIES 2 ENSGT00950000185620 ENSGT00940000168371 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880.h #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Testudinoidea ANCESTRAL SPECIES 10 ENSGT00940000161244 ENSGT00950000185620 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880.h #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Testudinidae ANCESTRAL SPECIES 11 ENSGT00940000161244 ENSGT00950000185620 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00940000172282 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880.h #33 ENSGT00950000183167.b ##34 ENSGT00940000157429.m #35 ENSGT00390000005342 #36 Goode s thornscrub tortoise MODERN SPECIES 19 SMYD1 (ENSGEVG00005001076) ZMAT1 (ENSGEVG00005001109) ENSGEVG00005001123 CD8A (ENSGEVG00005001144) RMND5A (ENSGEVG00005001163) ##26 RNF103 (ENSGEVG00005001179) CHMP3 (ENSGEVG00005001192) KDM3A (ENSGEVG00005001212) REEP1 (ENSGEVG00005001246) MRPL35 (ENSGEVG00005001263) IMMT (ENSGEVG00005001297) PTCD3 (ENSGEVG00005001349) POLR1A (ENSGEVG00005001447) ST3GAL5 (ENSGEVG00005001482) ATOH8 (ENSGEVG00005001500) FGFRL1 (ENSGEVG00005001514) #22 ENSGEVG00005001538 SPON2 (ENSGEVG00005001580) #24 ENSGEVG00005001606 CTBP1 (ENSGEVG00005001634) #25 MAEA (ENSGEVG00005001690) #26 ENSGEVG00005001722 ENSGEVG00005001741 FAM53A (ENSGEVG00005001753) #29 SLBP (ENSGEVG00005001772) #30 TMEM129 (ENSGEVG00005001790) #32 TACC3 (ENSGEVG00005001810) #31 ENSGEVG00005001847 #33 ENSGEVG00005001880 ##34 NSD2 (ENSGEVG00005001909) #35 NELFA (ENSGEVG00005001927) #36 Abingdon island giant tortoise MODERN SPECIES 2060 ATOH8 (ENSCABG00000022820) FGFRL1 (ENSCABG00000022823) #22 ENSCABG00000022825 SPON2 (ENSCABG00000022826) #24 CTBP1 (ENSCABG00000022831) #25 Emydidae ANCESTRAL SPECIES 1 ENSGT00940000161244 ENSGT00950000185620 ENSGT00940000173644 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880.h #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 Three-toed box turtle MODERN SPECIES 26 ZMAT1 (ENSTMTG00000002825) ENSTMTG00000002821 ENSTMTG00000002819 CD8A (ENSTMTG00000002812) RMND5A (ENSTMTG00000002801) ##26 RNF103 (ENSTMTG00000002798) CHMP3 (ENSTMTG00000002793) KDM3A (ENSTMTG00000002781) REEP1 (ENSTMTG00000002769) MRPL35 (ENSTMTG00000002764) IMMT (ENSTMTG00000002750) PTCD3 (ENSTMTG00000002726) POLR1A (ENSTMTG00000002551) ST3GAL5 (ENSTMTG00000002504) ATOH8 (ENSTMTG00000002498) FGFRL1 (ENSTMTG00000002490) #22 ENSTMTG00000002481 SPON2 (ENSTMTG00000002478) #24 CTBP1 (ENSTMTG00000002467) #25 MAEA (ENSTMTG00000002462) #26 ENSTMTG00000002454 NKX1-1 (ENSTMTG00000002450) #28 FAM53A (ENSTMTG00000002446) #29 SLBP (ENSTMTG00000002441) #30 TMEM129 (ENSTMTG00000002438) #32 TACC3 (ENSTMTG00000002422) #31 FGFR3 (ENSTMTG00000002395) #33 ENSTMTG00000002384 ##34 NSD2 (ENSTMTG00000002368) #35 NELFA (ENSTMTG00000002358) #36 ENSTMTG00000002350 #37 painted turtle MODERN SPECIES 725 SMYD1 (ENSCPBG00000001374) ZMAT1 (ENSCPBG00000001356) ENSCPBG00000001338 ENSCPBG00000001285 RMND5A (ENSCPBG00000001264) ##26 RNF103 (ENSCPBG00000001256) CHMP3 (ENSCPBG00000001251) KDM3A (ENSCPBG00000001228) REEP1 (ENSCPBG00000001218) MRPL35 (ENSCPBG00000001213) IMMT (ENSCPBG00000001183) PTCD3 (ENSCPBG00000001152) POLR1A (ENSCPBG00000001115) ST3GAL5 (ENSCPBG00000001089) ATOH8 (ENSCPBG00000001027) FGFRL1 (ENSCPBG00000001000) #22 ENSCPBG00000000981 SPON2 (ENSCPBG00000000965) #24 CTBP1 (ENSCPBG00000000892) #25 MAEA (ENSCPBG00000000853) #26 ENSCPBG00000000824 ENSCPBG00000000801 FAM53A (ENSCPBG00000000763) #29 SLBP (ENSCPBG00000000746) #30 TMEM129 (ENSCPBG00000000738) #32 TACC3 (ENSCPBG00000000303) #31 FGFR3 (ENSCPBG00000025109) #33 ENSCPBG00000025105 ##34 ENSCPBG00000025103 #35 ENSCPBG00000025097 #35 NELFA (ENSCPBG00000025095) #36 Chinese turtle MODERN SPECIES 163 ENSPSIG00000015774 CD8A (ENSPSIG00000015933) RMND5A (ENSPSIG00000016141) ##26 RNF103 (ENSPSIG00000016531) CHMP3 (ENSPSIG00000016653) KDM3A (ENSPSIG00000006346) ENSPSIG00000000796 REEP1 (ENSPSIG00000007684) MRPL35 (ENSPSIG00000008612) IMMT (ENSPSIG00000008619) PTCD3 (ENSPSIG00000009120) ENSPSIG00000009276 ENSPSIG00000009321 ST3GAL5 (ENSPSIG00000009525) ENSPSIG00000000802 FGFRL1 (ENSPSIG00000009605) #22 ENSPSIG00000000853 ENSPSIG00000009886 SPON2 (ENSPSIG00000009901) #24 CTBP1 (ENSPSIG00000009966) #25 RBMS1 (ENSPSIG00000010240) ITGB6 (ENSPSIG00000010413) PLA2R1 (ENSPSIG00000011109) LY75 (ENSPSIG00000011279) CD302 (ENSPSIG00000012311) MARCHF7 (ENSPSIG00000012317) Lepidosauria ANCESTRAL SPECIES 80 ENSGT00940000156114 ENSGT00940000161244 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00940000172282 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Episquamata ANCESTRAL SPECIES 2 ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000003758 ENSGT00940000163575 ENSGT00940000159552 ENSGT00390000016051 ENSGT00390000006051 ENSGT00940000158961 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B Laterata ANCESTRAL SPECIES ENSGT00960000192339 ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00940000166021 ENSGT00390000003758 ENSGT00940000163575 ENSGT00940000159552 ENSGT00390000016051 ENSGT00390000006051 ENSGT00940000158961 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738.s #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B Argentine black and white tegu MODERN SPECIES 44 EPSTI1 (ENSSMRG00000022808) DNAJC15 (ENSSMRG00000022807) ENSSMRG00000022806 ENOX1 (ENSSMRG00000022804) CCDC122 (ENSSMRG00000022803) LACC1 (ENSSMRG00000022802) ENSSMRG00000022801 NUFIP1 (ENSSMRG00000022800) GPALPP1 (ENSSMRG00000022799) KCTD4 (ENSSMRG00000022798) GTF2F2 (ENSSMRG00000022797) TPT1 (ENSSMRG00000022795) ENSSMRG00000022794 ST3GAL5 (ENSSMRG00000022793) ATOH8 (ENSSMRG00000022792) FGFRL1 (ENSSMRG00000022790) #22 SPON2 (ENSSMRG00000022788) #24 CTBP1 (ENSSMRG00000022787) #25 MAEA (ENSSMRG00000022785) #26 ENSSMRG00000022784 NKX1-1 (ENSSMRG00000022783) #28 SLBP (ENSSMRG00000022781) #30 TMEM129 (ENSSMRG00000022780) #32 ENSSMRG00000022779 FGFR3 (ENSSMRG00000022778) #33 ENSSMRG00000022777 ENSSMRG00000022776 NAT8L (ENSSMRG00000022775) C4orf48 (ENSSMRG00000022774) #37 NELFA (ENSSMRG00000022773) #36 NSD2 (ENSSMRG00000022772) #35 Common wall lizard MODERN SPECIES 13 DYRK4 (ENSPMRG00000003565) ENSPMRG00000003574 C12orf4 (ENSPMRG00000003578) FGF6 (ENSPMRG00000003587) FGF23 (ENSPMRG00000003592) ENSPMRG00000003595 PARP11 (ENSPMRG00000003602) CRACR2A (ENSPMRG00000003617) ENSPMRG00000003638 NUFIP1 (ENSPMRG00000003640) GPALPP1 (ENSPMRG00000003648) GTF2F2 (ENSPMRG00000003658) KCTD4 (ENSPMRG00000003666) ENSPMRG00000003670 ENSPMRG00000003678 FGFRL1 (ENSPMRG00000003682) #22 SPON2 (ENSPMRG00000003689) #24 ENSPMRG00000003704 #25 ENSPMRG00000003758 #25 ENSPMRG00000003773 #26 ENSPMRG00000003785 #26 ENSPMRG00000003791 NKX1-1 (ENSPMRG00000003811) #28 ENSPMRG00000003812 FAM53A (ENSPMRG00000003814) #29 SLBP (ENSPMRG00000003818) #30 TMEM129 (ENSPMRG00000003821) #32 TACC3 (ENSPMRG00000003823) #31 FGFR3 (ENSPMRG00000003828) #33 ENSPMRG00000003835 ##34 NSD2 (ENSPMRG00000003856) #35 Toxicofera ANCESTRAL SPECIES 2 ENSGT00390000013820 ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000003758 ENSGT00940000163575 ENSGT00390000016051 ENSGT00940000159552 ENSGT00390000006051 ENSGT00940000158961 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000008738.s #30 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B ENSGT00940000160120 ENSGT00500000045231 Elapidae ANCESTRAL SPECIES 13 ENSGT01070000253816.a.a.b ENSGT00940000159907 ENSGT00390000006788.a.b ENSGT00390000005130 ENSGT00390000000693 ENSGT00940000163647 ENSGT00940000166021 ENSGT00390000003758 ENSGT00940000163575 ENSGT00390000016051 ENSGT00940000159552 ENSGT00390000006051 ENSGT00940000158961 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00940000159900 #24 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000008738.s #30 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B ENSGT00940000160120 ENSGT00390000015682 Elapidae_a ANCESTRAL SPECIES 102 ENSGT00940000156736 #22 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000008738.s #30 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B ENSGT00940000160120 ENSGT00390000015682 ENSGT00950000182937.A.a Acanthophiinae ANCESTRAL SPECIES 93 ENSGT00940000156736 #22 ENSGT00940000157061.a.j #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000008738.s #30 ENSGT00900000142191 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 ENSGT00390000013043 #37 ENSGT00950000182932.B ENSGT00940000160120 ENSGT00390000015682 ENSGT00950000182937.A.a Eastern brown snake MODERN SPECIES 27 DGKH (ENSPTXG00000005947) AKAP11 (ENSPTXG00000005952) TNFSF11 (ENSPTXG00000005954) DNAJC15 (ENSPTXG00000005956) ENOX1 (ENSPTXG00000005958) CCDC122 (ENSPTXG00000005959) LACC1 (ENSPTXG00000005964) ENSPTXG00000003593 ENSPTXG00000003595 GPALPP1 (ENSPTXG00000003598) GTF2F2 (ENSPTXG00000003602) KCTD4 (ENSPTXG00000003604) TPT1 (ENSPTXG00000003608) ENSPTXG00000003612 ST3GAL5 (ENSPTXG00000003617) FGFRL1 (ENSPTXG00000003621) #22 Mainland tiger snake MODERN SPECIES 450 FGFRL1 (ENSNSUG00000013022) #22 CTBP1 (ENSNSUG00000013017) #25 ENSNSUG00000013016 Blue-lipped sea krait MODERN SPECIES 4211 FGFRL1 (ENSLLTG00000016976) #22 Indian cobra MODERN SPECIES 5 RGCC (ENSNNAG00000016393) DGKH (ENSNNAG00000016413) ENSNNAG00000016639 DNAJC15 (ENSNNAG00000016663) ENOX1 (ENSNNAG00000016671) ENSNNAG00000016694 LACC1 (ENSNNAG00000016702) ENSNNAG00000016709 GPALPP1 (ENSNNAG00000007615) GTF2F2 (ENSNNAG00000007652) KCTD4 (ENSNNAG00000007740) TPT1 (ENSNNAG00000007771) SLC25A30 (ENSNNAG00000007807) ST3GAL5 (ENSNNAG00000007849) ATOH8 (ENSNNAG00000007882) FGFRL1 (ENSNNAG00000007904) #22 SPON2 (ENSNNAG00000007927) #24 CTBP1 (ENSNNAG00000007965) #25 ENSNNAG00000008030 MAEA (ENSNNAG00000008048) #26 ENSNNAG00000008082 NKX1-1 (ENSNNAG00000008125) #28 SLBP (ENSNNAG00000008157) #30 ENSNNAG00000008186 FGFR3 (ENSNNAG00000008222) #33 ENSNNAG00000008343 ##34 ENSNNAG00000008402 #35 ENSNNAG00000008473 #35 NELFA (ENSNNAG00000008587) #36 C4orf48 (ENSNNAG00000008605) #37 NAT8L (ENSNNAG00000008658) Lizard MODERN SPECIES 1229 ENSACAG00000011540 #22 tuatara MODERN SPECIES 325 FGFRL1 (ENSSPUG00000007318) #22 ENSSPUG00000007296 SPON2 (ENSSPUG00000007242) #24 Anura ANCESTRAL SPECIES 2 ENSGT00940000161244 ENSGT00940000156888 ENSGT00510000048998 ENSGT00940000156588 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000002313 ENSGT00390000016876 ENSGT00390000007547 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 ENSGT00390000005342 #36 Leishan spiny toad MODERN SPECIES ENSLLEG00000005702 ENSLLEG00000005685 RMND5A (ENSLLEG00000005573) ##26 RNF103 (ENSLLEG00000005518) CHMP3 (ENSLLEG00000005416) KDM3A (ENSLLEG00000005304) REEP1 (ENSLLEG00000005251) IMMT (ENSLLEG00000005187) PTCD3 (ENSLLEG00000005015) MRPL35 (ENSLLEG00000003838) POLR1A (ENSLLEG00000003817) ST3GAL5 (ENSLLEG00000003807) ATOH8 (ENSLLEG00000003794) ENSLLEG00000003784 ENSLLEG00000003780 FGFRL1 (ENSLLEG00000003765) #22 ENSLLEG00000003756 ENSLLEG00000003753 ENSLLEG00000003749 RNF212 (ENSLLEG00000003740) #23 ENSLLEG00000003735 SPON2 (ENSLLEG00000003729) #24 CTBP1 (ENSLLEG00000003680) #25 MAEA (ENSLLEG00000003566) #26 ENSLLEG00000003532 ENSLLEG00000003528 ENSLLEG00000003505 NKX1-1 (ENSLLEG00000003496) #28 ENSLLEG00000003490 FAM53A (ENSLLEG00000003474) #29 ENSLLEG00000003454 #30 Frog MODERN SPECIES ENSXETG00000001930 ENSXETG00000040208 ENSXETG00000043414 foxi4.1 (ENSXETG00000044613) foxi4.2 (ENSXETG00000001934) thnsl2 (ENSXETG00000001936) fabp1 (ENSXETG00000001938) smyd1 (ENSXETG00000001940) krcc1 (ENSXETG00000043962) mrpl35 (ENSXETG00000028100) polr1a (ENSXETG00000001952) st3gal5 (ENSXETG00000001974) ENSXETG00000047978 atoh8 (ENSXETG00000041181) ENSXETG00000039689 fgfrl1 (ENSXETG00000021042) #22 ENSXETG00000042708 RNF212 (ENSXETG00000041996) #23 gp25l (ENSXETG00000032430) spon2 (ENSXETG00000021044) #24 ctbp1 (ENSXETG00000021047) #25 maea (ENSXETG00000010676) #26 ENSXETG00000043260 uvssa (ENSXETG00000010677) nkx1-1 (ENSXETG00000003881) #28 fam53a (ENSXETG00000003878) #29 slbp (ENSXETG00000003876) #30 tmem129 (ENSXETG00000003875) #32 tacc3 (ENSXETG00000003874) #31 fgfr3 (ENSXETG00000002396) #33 letm1 (ENSXETG00000032769) ##34 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1174 LRRTM2 (ENSLACG00000012906) ctnna1 (ENSLACG00000012642) ENSLACG00000012009 ENSLACG00000011745 SIL1 (ENSLACG00000009486) HSPA9 (ENSLACG00000009096) fgfrl1b (ENSLACG00000008246) #22 ENSLACG00000007722 MATR3 (ENSLACG00000006743) PAIP2 (ENSLACG00000006350) EGR1 (ENSLACG00000005149) REEP2 (ENSLACG00000000349) Coelacanth MODERN SPECIES 1111 ST3GAL5 (ENSLACG00000003834) ATOH8 (ENSLACG00000006436) FGFRL1 (ENSLACG00000009788) #22 Actinopterygii ANCESTRAL SPECIES 64 ENSGT00950000183109.d ENSGT00950000185665 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00940000165542 ENSGT00940000159795 ENSGT00920000149123.d ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000158858 #31 ENSGT00940000159880 #33 ENSGT00950000183167.b ##34 ENSGT00940000157429 #35 Neopterygii ANCESTRAL SPECIES 35 ENSGT00940000162967 ENSGT00940000158736 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 ENSGT00950000182832.C ENSGT00940000160135 ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000002313 ENSGT00390000016876 ENSGT00920000149138 ENSGT00940000157929 ENSGT00940000161151 ENSGT00510000046732.B ENSGT00920000149123.d ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 Osteoglossocephalai ANCESTRAL SPECIES 133 ENSGT00940000156803 ENSGT00390000017614 ENSGT00940000163031.b.b ENSGT00440000033329.b.a.b ENSGT00390000013770 ENSGT00440000033895 ENSGT01090000260076.b.a ENSGT00950000183196.D.b ENSGT00940000159795 ENSGT00940000165542 ENSGT00940000153441.b ENSGT00940000160487 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00920000149123.d ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00390000013163 ENSGT00940000153700 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000153147 ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a ENSGT00950000183137.b.b ENSGT00940000156471.b ##11 ENSGT01100000263544.c.a.a.a ##20 Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 28 ENSGT00440000033895 ENSGT00390000013770 ENSGT00440000033329.b.a.b ENSGT00940000163031.b.b ENSGT00390000017614.f ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000161151 ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 Euteleosteomorpha ANCESTRAL SPECIES 9 ENSGT00440000033895 ENSGT00390000013770 ENSGT00440000033329.b.a.b ENSGT00940000163031.b.b ENSGT00390000017614.f ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000161151 ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 Protacanthopterygii ANCESTRAL SPECIES 19 ENSGT01090000260076.b.a ENSGT00940000160633.b ENSGT00440000033895 ENSGT00390000013770 ENSGT00440000033329.b.a.b ENSGT00940000163031.b.b ENSGT00390000017614.f ENSGT00940000156803.m ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000159942.b ENSGT00940000160863 ENSGT00390000010318.hc ENSGT00940000156736.c.a #22 ENSGT00970000197568 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00940000161151 ENSGT00940000157929 Northern pike MODERN SPECIES 3 zgc:66433 (ENSELUG00000013531) lyg2 (ENSELUG00000030629) ids (ENSELUG00000013417) AFF2 (ENSELUG00000013368) ENSELUG00000032255 fmr1 (ENSELUG00000013325) SLITRK2 (ENSELUG00000000481) ENSELUG00000029184 SLITRK4 (ENSELUG00000000480) ENSELUG00000013269 rab33a (ENSELUG00000013219) ENSELUG00000033341 selenot2 (ENSELUG00000013172) ENSELUG00000013200 rnf4 (ENSELUG00000013137) fgfrl1a (ENSELUG00000013111) #22 RNF212 (ENSELUG00000013082) #23 ENSELUG00000013013 spon2b (ENSELUG00000013048) #24 zgc:136929 (ENSELUG00000013004) #25 maea (ENSELUG00000012979) #26 uvssa (ENSELUG00000012933) nkx1.2lb (ENSELUG00000012912) #28 ENSELUG00000012893 slbp (ENSELUG00000027648) #30 tmem129 (ENSELUG00000012831) #32 atoh8 (ENSELUG00000012825) st3gal5 (ENSELUG00000012810) POLR1A (ENSELUG00000012769) ptcd3 (ENSELUG00000012679) immt (ENSELUG00000012627) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 791 ENSGT00390000010318.hc.a ENSGT00940000156736.c.a.a.a #22 ENSGT00940000160999 ENSGT00940000159900.d #24 ENSGT00940000157061.a.c #25 ENSGT00940000153203.B.i #26 ENSGT00940000162861.r #28 ENSGT00390000008738.b #30 ENSGT00940000161151.c Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000159795.e ENSGT00950000183196.D.b.j ENSGT01090000260076.b.a.i ENSGT00940000160633.b.a ENSGT00440000033895.b ENSGT00440000033329.b.a.b.e ENSGT00940000163031.b.b.c ENSGT00390000017614.f ENSGT00940000156803.m ENSGT00950000182974.a.a.a.a.y.a ENSGT00950000183189.a.b.b.f ENSGT00940000161248.j ENSGT00940000160971.e ENSGT00940000160863.c.a ENSGT00390000010318.hc.a ENSGT00940000156736.c.a.a.a #22 ENSGT00940000160999 ENSGT00940000159900.d #24 ENSGT00940000157061.a.c #25 ENSGT00940000153203.B.i #26 ENSGT00940000162861.r #28 ENSGT00390000008738.b #30 ENSGT00940000161151.c ENSGT00990000210158 ENSGT00940000163251.b ENSGT00520000055589.d.a.a.d Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00940000159795.e ENSGT00950000183196.D.b.j ENSGT01090000260076.b.a.i ENSGT00940000160633.b.a ENSGT00440000033895.b ENSGT00440000033329.b.a.b.e ENSGT00940000163031.b.b.c ENSGT00390000017614.f ENSGT00940000156803.m ENSGT00950000182974.a.a.a.a.y.a ENSGT00950000183189.a.b.b.f ENSGT00940000161248.j ENSGT00940000160971.e ENSGT00940000160863.c.a ENSGT00390000010318.hc.a ENSGT00940000156736.c.a.a.a #22 ENSGT00940000160999 ENSGT00940000159900.d #24 ENSGT00940000157061.a.c #25 ENSGT00940000153203.B.i #26 ENSGT00940000162861.r #28 ENSGT00390000008738.b #30 ENSGT00940000161151.c ENSGT00990000210158 ENSGT00940000163251.b ENSGT00520000055589.d.a.a.d Rainbow trout MODERN SPECIES 5 ENSOMYG00000012626 ENSOMYG00000056565 fam199x (ENSOMYG00000012581) ENSOMYG00000012538 ENSOMYG00000058948 zgc:66433 (ENSOMYG00000012500) lygl2 (ENSOMYG00000012460) ENSOMYG00000006880 ids (ENSOMYG00000012432) AFF2 (ENSOMYG00000012416) fmr1 (ENSOMYG00000010284) SLITRK2 (ENSOMYG00000009670) SLITRK4 (ENSOMYG00000009631) rab33a (ENSOMYG00000045025) rnf4 (ENSOMYG00000009581) fgfrl1a (ENSOMYG00000009537) #22 ENSOMYG00000029569 zgc:136929 (ENSOMYG00000016914) #25 MAEA (ENSOMYG00000007812) #26 ENSOMYG00000055328 NKX1-1 (ENSOMYG00000053085) #28 SLBP (ENSOMYG00000004989) #30 ENSOMYG00000005054 ENSOMYG00000063557 ENSOMYG00000007736 Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00940000159795.e ENSGT00950000183196.D.b.j ENSGT01090000260076.b.a.i ENSGT00940000160633.b.a ENSGT00440000033895.b ENSGT00440000033329.b.a.b.e ENSGT00940000163031.b.b.c ENSGT00390000017614.f ENSGT00940000156803.m ENSGT00950000182974.a.a.a.a.y.a ENSGT00950000183189.a.b.b.f ENSGT00940000161248.j ENSGT00940000160971.e ENSGT00940000160863.c.a ENSGT00390000010318.hc.a ENSGT00940000156736.c.a.a.a #22 ENSGT00940000160999 ENSGT00940000159900.d #24 ENSGT00940000157061.a.c #25 ENSGT00940000153203.B.i #26 ENSGT00940000162861.r #28 ENSGT00390000008738.b #30 ENSGT00940000161151.c ENSGT00990000210158 ENSGT00940000163251.b ENSGT00520000055589.d.a.a.d Coho salmon MODERN SPECIES 10 ENSOKIG00005010232 ENSOKIG00005010121 il1rapl2 (ENSOKIG00005010061) ENSOKIG00005010044 fam199x (ENSOKIG00005010024) LONRF3 (ENSOKIG00005009907) zgc:66433 (ENSOKIG00005009858) lygl2 (ENSOKIG00005009799) ids (ENSOKIG00005009728) AFF2 (ENSOKIG00005009712) fmr1 (ENSOKIG00005007772) SLITRK2 (ENSOKIG00005007693) SLITRK4 (ENSOKIG00005007690) rab33a (ENSOKIG00005007684) rnf4 (ENSOKIG00005007659) fgfrl1a (ENSOKIG00005007637) #22 ENSOKIG00005007632 ENSOKIG00005007620 spon2b (ENSOKIG00005007589) #24 ENSOKIG00005007582 CTBP1 (ENSOKIG00005007538) #25 MAEA (ENSOKIG00005007505) #26 NKX1-1 (ENSOKIG00005007493) #28 SLBP (ENSOKIG00005007467) #30 atoh8 (ENSOKIG00005007458) STOX2 (ENSOKIG00005007402) ENSOKIG00005007382 brca2 (ENSOKIG00005007365) ENSOKIG00005007349 IWS1 (ENSOKIG00005007302) ENSOKIG00005007294 Chinook salmon MODERN SPECIES 13 ENSOTSG00005035393 ENSOTSG00005035395 il1rapl2 (ENSOTSG00005035398) ENSOTSG00005035405 fam199x (ENSOTSG00005035413) LONRF3 (ENSOTSG00005035425) zgc:66433 (ENSOTSG00005035479) lygl2 (ENSOTSG00005035480) ids (ENSOTSG00005035481) ENSOTSG00005035482 fmr1 (ENSOTSG00005035496) SLITRK2 (ENSOTSG00005038236) SLITRK4 (ENSOTSG00005038237) rab33a (ENSOTSG00005038238) rnf4 (ENSOTSG00005038241) fgfrl1a (ENSOTSG00005038243) #22 ENSOTSG00005038247 spon2b (ENSOTSG00005038249) #24 zgc:136929 (ENSOTSG00005038259) #25 maea (ENSOTSG00005040200) #26 nkx1.2lb (ENSOTSG00005040201) #28 SLBP (ENSOTSG00005040205) #30 ENSOTSG00005040210 ENSOTSG00005040211 STOX2 (ENSOTSG00005040216) spdl1 (ENSOTSG00005040217) ENSOTSG00005040219 ENSOTSG00005040220 KLHL3 (ENSOTSG00005040221) fam13b (ENSOTSG00005040245) cxcl14 (ENSOTSG00005040351) Salmo ANCESTRAL SPECIES 1 ENSGT00940000165542.a ENSGT00940000159795.e ENSGT00950000183196.D.b.j ENSGT01090000260076.b.a.i ENSGT00440000033895.b ENSGT00440000033329.b.a.b.e ENSGT00940000163031.b.b.c ENSGT00390000017614.f ENSGT00940000156803.m ENSGT00950000182974.a.a.a.a.y.a ENSGT00950000183189.a.b.b.f ENSGT00940000161248.j ENSGT00940000160971.e ENSGT00940000160863.c.a ENSGT00390000010318.hc.a ENSGT00940000156736.c.a.a.a #22 ENSGT00940000160999 ENSGT00940000159900.d #24 ENSGT00940000157061.a.c #25 ENSGT00940000153203.B.i #26 ENSGT00940000162861.r #28 ENSGT00990000210158 ENSGT00940000163251.b ENSGT00520000055589.d.a.a.d ENSGT00940000157999.g.b ENSGT00940000157999.h ENSGT00530000063624.C.b.f ENSGT00940000164873.d ENSGT00390000002144.eb ENSGT00940000157151.c.d ENSGT00940000161438.e River trout MODERN SPECIES 22 ENSSTUG00000043050 il1rapl2 (ENSSTUG00000043062) fam199x (ENSSTUG00000043150) ENSSTUG00000043207 LONRF3 (ENSSTUG00000043209) zgc:66433 (ENSSTUG00000043232) zgc:162941 (ENSSTUG00000043310) AFF2 (ENSSTUG00000043367) fmr1 (ENSSTUG00000043467) SLITRK2 (ENSSTUG00000044950) ENSSTUG00000044970 SLITRK4 (ENSSTUG00000044976) ENSSTUG00000044981 rab33a (ENSSTUG00000044991) rnf4 (ENSSTUG00000045007) fgfrl1a (ENSSTUG00000045030) #22 ENSSTUG00000045075 zgc:136929 (ENSSTUG00000045200) #25 maea (ENSSTUG00000045345) #26 nkx1.2lb (ENSSTUG00000045379) #28 ENSSTUG00000045382 ENSSTUG00000045391 STOX2 (ENSSTUG00000045419) SCMH1 (ENSSTUG00000045433) ENSSTUG00000045453 cited4b (ENSSTUG00000045457) ENSSTUG00000045460 taf12 (ENSSTUG00000045472) ptprub (ENSSTUG00000045511) ENSSTUG00000045896 paqr7b (ENSSTUG00000045903) Atlantic salmon MODERN SPECIES 24 ENSSSAG00000054771 ENSSSAG00000053419 fam199x (ENSSSAG00000053452) lonrf3 (ENSSSAG00000053472) zgc:66433 (ENSSSAG00000053506) lygl2 (ENSSSAG00000053544) ids (ENSSSAG00000053581) AFF2 (ENSSSAG00000053621) fmr1 (ENSSSAG00000053722) ENSSSAG00000082993 SLITRK4 (ENSSSAG00000060876) ENSSSAG00000081901 ENSSSAG00000081652 rab33a (ENSSSAG00000110778) rnf4 (ENSSSAG00000053661) fgfrl1a (ENSSSAG00000061433) #22 ENSSSAG00000117344 ENSSSAG00000112004 spon2b (ENSSSAG00000060717) #24 CTBP1 (ENSSSAG00000104678) #25 MAEA (ENSSSAG00000060987) #26 ENSSSAG00000121521 NKX1-1 (ENSSSAG00000107264) #28 ENSSSAG00000060466 ENSSSAG00000060449 ENSSSAG00000053668 ENSSSAG00000115146 ENSSSAG00000083454 ENSSSAG00000119331 ENSSSAG00000086709 ctps1b (ENSSSAG00000063739) Huchen MODERN SPECIES 642 rnf4 (ENSHHUG00000040067) fgfrl1a (ENSHHUG00000040083) #22 ENSHHUG00000040097 spon2b (ENSHHUG00000040099) #24 Salmoninae ANCESTRAL SPECIES 51 ENSGT00390000013770 ENSGT00440000033329.b.a.b.f ENSGT00940000163031.b.b.d ENSGT00940000156803.n ENSGT00950000182974.a.a.a.a.y.b ENSGT00950000183189.a.b.b.e ENSGT00940000161248.i ENSGT00940000160971.f ENSGT00940000159942.b ENSGT00940000160863.d ENSGT01000000220275 ENSGT00940000160863.c.b ENSGT00390000011725.c ENSGT00940000157217.f ENSGT00390000010318.hc.b ENSGT00940000156736.c.a.a.b #22 ENSGT00740000115581.f #23 ENSGT00940000159900.c #24 ENSGT00940000157061.a.d #25 ENSGT00940000153203.B.j #26 ENSGT00940000164256 ENSGT00940000162861.q #28 ENSGT00940000157944.f ENSGT00390000009871 ENSGT00390000008738.a #30 ENSGT00390000013284 #32 ENSGT00940000161151.d ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 Salmoninae_a ANCESTRAL SPECIES 41 ENSGT00390000013770 ENSGT00440000033329.b.a.b.f ENSGT00940000163031.b.b.d ENSGT00940000156803.n ENSGT00950000182974.a.a.a.a.y.b ENSGT00950000183189.a.b.b.e ENSGT00940000161248.i ENSGT00940000160971.f ENSGT00940000159942.b ENSGT00940000160863.d ENSGT01000000220275 ENSGT00940000160863.c.b ENSGT00390000011725.c ENSGT00940000157217.f ENSGT00390000010318.hc.b ENSGT00940000156736.c.a.a.b #22 ENSGT00740000115581.f #23 ENSGT00940000159900.c #24 ENSGT00940000157061.a.d #25 ENSGT00940000153203.B.j #26 ENSGT00940000164256 ENSGT00940000162861.q #28 ENSGT00940000157944.f ENSGT00390000009871 ENSGT00390000008738.a #30 ENSGT00390000013284 #32 ENSGT00940000161151.d ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 Salmo ANCESTRAL SPECIES 47 ENSGT00940000160633.b.b ENSGT00440000033895.a ENSGT00390000013770 ENSGT00440000033329.b.a.b.f ENSGT00940000163031.b.b.d ENSGT00940000156803.n ENSGT00950000182974.a.a.a.a.y.b ENSGT00950000183189.a.b.b.e ENSGT00940000161248.i ENSGT00940000160971.f ENSGT00940000159942.b.g ENSGT00940000160863.c.b ENSGT00390000011725.c ENSGT00940000157217.f ENSGT00390000010318.hc.b ENSGT00940000156736.c.a.a.b #22 ENSGT00740000115581.f #23 ENSGT00990000211754 ENSGT00940000159900.c #24 ENSGT00940000157061.a.d #25 ENSGT00940000153203.B.j #26 ENSGT00940000164256 ENSGT00940000162861.q #28 ENSGT00940000157944.f ENSGT00390000009871 ENSGT00390000008738.a #30 ENSGT00390000013284 #32 ENSGT00940000161151.d ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 River trout MODERN SPECIES 4 fam199x (ENSSTUG00000027052) commd5 (ENSSTUG00000027075) ENSSTUG00000027086 zgc:66433 (ENSSTUG00000027094) ids (ENSSTUG00000027144) AFF2 (ENSSTUG00000027163) fmr1 (ENSSTUG00000027252) SLITRK2 (ENSSTUG00000028921) SLITRK4 (ENSSTUG00000028927) ENSSTUG00000028930 ENSSTUG00000028948 rab33a (ENSSTUG00000029017) selenot2 (ENSSTUG00000029025) ENSSTUG00000029038 rnf4 (ENSSTUG00000029067) fgfrl1a (ENSSTUG00000029119) #22 ENSSTUG00000029131 #23 ENSSTUG00000029145 spon2b (ENSSTUG00000029157) #24 zgc:136929 (ENSSTUG00000029192) #25 maea (ENSSTUG00000029530) #26 uvssa (ENSSTUG00000029556) nkx1.2lb (ENSSTUG00000029591) #28 ENSSTUG00000029593 ENSSTUG00000029618 ENSSTUG00000029656 ENSSTUG00000029670 ALDH3A2 (ENSSTUG00000029688) slbp (ENSSTUG00000029710) #30 tmem129 (ENSSTUG00000029744) #32 atoh8 (ENSSTUG00000029763) Atlantic salmon MODERN SPECIES 28 commd5 (ENSSSAG00000057116) ENSSSAG00000057147 zgc:66433 (ENSSSAG00000057295) ENSSSAG00000084630 ids (ENSSSAG00000106445) AFF2 (ENSSSAG00000057351) fmr1 (ENSSSAG00000057413) SLITRK2 (ENSSSAG00000060866) ENSSSAG00000085205 SLITRK4 (ENSSSAG00000119723) ENSSSAG00000060952 rab33a (ENSSSAG00000088432) selenot2 (ENSSSAG00000061169) ENSSSAG00000061218 RNF4 (ENSSSAG00000061334) fgfrl1a (ENSSSAG00000107638) #22 ENSSSAG00000108010 rnf212 (ENSSSAG00000061518) #23 ENSSSAG00000061545 spon2b (ENSSSAG00000061591) #24 ctbp1 (ENSSSAG00000061710) #25 MAEA (ENSSSAG00000063575) #26 uvssa (ENSSSAG00000063629) nkx1.2lb (ENSSSAG00000109158) #28 ENSSSAG00000063870 al3a2 (ENSSSAG00000063675) slbp (ENSSSAG00000063884) #30 tmem129 (ENSSSAG00000063892) #32 atoh8 (ENSSSAG00000099210) st3gal5 (ENSSSAG00000063904) POLR1A (ENSSSAG00000063915) Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00390000013770 ENSGT00440000033329.b.a.b.f ENSGT00940000163031.b.b.d ENSGT00940000156803.n ENSGT00950000182974.a.a.a.a.y.b ENSGT00950000183189.a.b.b.e ENSGT00940000161248.i ENSGT00940000160971.f ENSGT00940000159942.b ENSGT00940000160863.d ENSGT01000000220275 ENSGT00940000160863.c.b ENSGT00390000011725.c ENSGT00940000157217.f ENSGT00390000010318.hc.b ENSGT00940000156736.c.a.a.b #22 ENSGT00740000115581.f #23 ENSGT00940000159900.c #24 ENSGT00940000157061.a.d #25 ENSGT00940000153203.B.j #26 ENSGT00940000164256 ENSGT00940000162861.q #28 ENSGT00940000157944.f ENSGT00390000009871 ENSGT00390000008738.a #30 ENSGT00390000013284 #32 ENSGT00940000161151.d ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 Rainbow trout MODERN SPECIES 23 ENSOMYG00000058370 ENSOMYG00000071018 ENSOMYG00000052798 AFF2 (ENSOMYG00000045172) fmr1 (ENSOMYG00000045067) SLITRK2 (ENSOMYG00000050372) SLITRK4 (ENSOMYG00000045044) ENSOMYG00000065557 ENSOMYG00000045029 rab33a (ENSOMYG00000055543) ENSOMYG00000045022 selenot2 (ENSOMYG00000045016) ENSOMYG00000045001 rnf4 (ENSOMYG00000044994) ENSOMYG00000071402 fgfrl1a (ENSOMYG00000044988) #22 ENSOMYG00000044984 #23 spon2b (ENSOMYG00000051419) #24 CTBP1 (ENSOMYG00000044943) #25 MAEA (ENSOMYG00000044921) #26 uvssa (ENSOMYG00000044907) nkx1.2lb (ENSOMYG00000044899) #28 ENSOMYG00000044867 ENSOMYG00000044863 slbp (ENSOMYG00000044859) #30 tmem129 (ENSOMYG00000044854) #32 ATOH8 (ENSOMYG00000044853) st3gal5 (ENSOMYG00000044848) POLR1A (ENSOMYG00000044037) ptcd3 (ENSOMYG00000043863) immt (ENSOMYG00000043811) Oncorhynchus_a ANCESTRAL SPECIES 34 ENSGT00940000160633.b.b ENSGT00440000033895.a ENSGT00390000013770 ENSGT00440000033329.b.a.b.f ENSGT00940000163031.b.b.d ENSGT00940000156803.n ENSGT00950000182974.a.a.a.a.y.b ENSGT00950000183189.a.b.b.e ENSGT00940000161248.i ENSGT00940000160971.f ENSGT00940000159942.b ENSGT00940000160863.c.b ENSGT00390000011725.c ENSGT00940000157217.f ENSGT00390000010318.hc.b ENSGT00940000156736.c.a.a.b #22 ENSGT00740000115581.f #23 ENSGT00940000159900.c #24 ENSGT00940000157061.a.d #25 ENSGT00940000153203.B.j #26 ENSGT00940000164256 ENSGT00940000162861.q #28 ENSGT00940000157944.f ENSGT00390000009871 ENSGT00390000008738.a #30 ENSGT00390000013284 #32 ENSGT00940000161151.d ENSGT00940000157929 ENSGT00920000149138 ENSGT00390000016876 ENSGT00390000002313 Coho salmon MODERN SPECIES 6 fam199x (ENSOKIG00005021158) commd5 (ENSOKIG00005021144) LONRF3 (ENSOKIG00005021136) zgc:66433 (ENSOKIG00005021098) ids (ENSOKIG00005021043) AFF2 (ENSOKIG00005020969) fmr1 (ENSOKIG00005020470) SLITRK2 (ENSOKIG00005020417) ENSOKIG00005020410 SLITRK4 (ENSOKIG00005020401) ENSOKIG00005020256 rab33a (ENSOKIG00005020233) selenot2 (ENSOKIG00005020218) ENSOKIG00005020165 rnf4 (ENSOKIG00005020091) fgfrl1a (ENSOKIG00005020056) #22 ENSOKIG00005020022 #23 spon2b (ENSOKIG00005020009) #24 zgc:136929 (ENSOKIG00005019874) #25 maea (ENSOKIG00005019815) #26 uvssa (ENSOKIG00005019793) nkx1.2lb (ENSOKIG00005019786) #28 ALDH3A2 (ENSOKIG00005019765) ENSOKIG00005019748 slbp (ENSOKIG00005019708) #30 tmem129 (ENSOKIG00005019699) #32 ATOH8 (ENSOKIG00005019690) st3gal5 (ENSOKIG00005019685) POLR1A (ENSOKIG00005019480) ptcd3 (ENSOKIG00005019235) immt (ENSOKIG00005019162) Chinook salmon MODERN SPECIES 32 fam199x (ENSOTSG00005008951) commd5 (ENSOTSG00005008944) ENSOTSG00005008942 zgc:66433 (ENSOTSG00005008939) ids (ENSOTSG00005008935) AFF2 (ENSOTSG00005008933) ENSOTSG00005008931 fmr1 (ENSOTSG00005008784) SLITRK2 (ENSOTSG00005046572) SLITRK4 (ENSOTSG00005046571) ENSOTSG00005046564 rab33a (ENSOTSG00005046562) selenot2 (ENSOTSG00005046561) ENSOTSG00005046558 rnf4 (ENSOTSG00005046557) fgfrl1a (ENSOTSG00005046554) #22 ENSOTSG00005046552 #23 spon2b (ENSOTSG00005046550) #24 zgc:136929 (ENSOTSG00005046542) #25 maea (ENSOTSG00005046540) #26 uvssa (ENSOTSG00005046539) nkx1.2lb (ENSOTSG00005046538) #28 ALDH3A2 (ENSOTSG00005046535) ENSOTSG00005046534 slbp (ENSOTSG00005046533) #30 tmem129 (ENSOTSG00005046531) #32 atoh8 (ENSOTSG00005046530) st3gal5 (ENSOTSG00005046529) POLR1A (ENSOTSG00005045517) ptcd3 (ENSOTSG00005045507) immt (ENSOTSG00005045500) Salmoninae ANCESTRAL SPECIES 2108 ENSGT00940000156736.c.a.b #22 ENSGT00970000197568 Huchen MODERN SPECIES 3365 FGFRL1 (ENSHHUG00000024171) #22 ENSHHUG00000024146 spon2b (ENSHHUG00000024134) #24 zgc:136929 (ENSHHUG00000023759) #25 maea (ENSHHUG00000023737) #26 uvssa (ENSHHUG00000023728) nkx1.2lb (ENSHHUG00000023723) #28 Acanthomorphata ANCESTRAL SPECIES 249 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000153147.a.a ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 Euacanthomorphacea ANCESTRAL SPECIES 10 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT00940000175410 ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d ENSGT00950000182968.d.b.a ENSGT01030000234530.a.c.b.b.a.a ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000153147.a.a ENSGT00940000154808.a.b ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b Percomorphaceae ANCESTRAL SPECIES 11 ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00950000182968.d.b.a.b ENSGT01030000234530.a.d.e.b.a ENSGT00950000182968.d.b.a.a ENSGT01030000234530.a.c.b.a ENSGT01030000234530.a.c.b.b.a.b ENSGT01030000234530.a.d.e.a ENSGT01030000234530.a.c.b.b.a.a.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Tiger tail seahorse MODERN SPECIES 332 HTR4 (ENSHCOG00000006309) SLC26A2 (ENSHCOG00000006316) ##20 pde6a (ENSHCOG00000006357) ##11 ENSHCOG00000006411 ARHGEF37 (ENSHCOG00000006428) ELP1 (ENSHCOG00000006585) GALNT8 (ENSHCOG00000006675) CPXM1 (ENSHCOG00000006762) SMU1 (ENSHCOG00000006827) ENSHCOG00000006850 #16 PCGF3 (ENSHCOG00000006888) #15 SLC49A3 (ENSHCOG00000000199) #14 NCBP1 (ENSHCOG00000000204) ENSHCOG00000006954 ENSHCOG00000007026 fgfrl1a (ENSHCOG00000007058) #22 ENSHCOG00000007075 spon2b (ENSHCOG00000000213) #24 zgc:136929 (ENSHCOG00000007124) #25 maea (ENSHCOG00000000217) #26 HNRNPA0 (ENSHCOG00000007174) ENSHCOG00000007180 KLHL3 (ENSHCOG00000007212) fam13b (ENSHCOG00000007275) cxcl14 (ENSHCOG00000007303) LINGO2 (ENSHCOG00000000239) ENSHCOG00000007314 eif4ea (ENSHCOG00000008501) ENSHCOG00000008614 gar1 (ENSHCOG00000008656) pitx2 (ENSHCOG00000008663) Percomorphaceae_B ANCESTRAL SPECIES 14 ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT00940000175410 ENSGT01050000244824.C ENSGT00940000170871 ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00950000183123 ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000167175 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a Percomorphaceae_C ANCESTRAL SPECIES 16 ENSGT00990000205479 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00940000170871 ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00950000183123 ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000167175 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a Percomorphaceae_D ANCESTRAL SPECIES 17 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00950000182968.d.b.a.b ENSGT01030000234530.a.d.e.b.a.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.a.b ENSGT01030000234530.a.c.b.a.b ENSGT00940000170413.B ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Carangaria ANCESTRAL SPECIES 15 ENSGT00940000156198.c.a ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000177190 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00950000183123 ENSGT00940000167175 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Pleuronectoidei ANCESTRAL SPECIES 19 ENSGT00940000161833 ENSGT00940000161843 ENSGT00530000067117 ENSGT00940000156198.c.a ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT00940000173984 ENSGT01030000234530.a.d.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00940000167175 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Turbot MODERN SPECIES 4 ENSSMAG00000011168 ENSSMAG00000011116 ENSSMAG00000011068 ENSSMAG00000011041 MCM7 (ENSSMAG00000011017) ENSSMAG00000025298 ENSSMAG00000010978 ENSSMAG00000010934 ENSSMAG00000010900 ENSSMAG00000023026 ENSSMAG00000010841 ENSSMAG00000024700 ENSSMAG00000010797 ENSSMAG00000010820 ENSSMAG00000010540 fgfrl1a (ENSSMAG00000010509) #22 ENSSMAG00000029602 ENSSMAG00000010473 spon2b (ENSSMAG00000010439) #24 CTBP1 (ENSSMAG00000010328) #25 MAEA (ENSSMAG00000010319) #26 ENSSMAG00000010279 ENSSMAG00000010246 ENSSMAG00000010196 ENSSMAG00000010115 cxcl14 (ENSSMAG00000010064) ENSSMAG00000010054 ENSSMAG00000010015 ENSSMAG00000009982 zgc:77938 (ENSSMAG00000009951) pitx2 (ENSSMAG00000009942) Tongue sole MODERN SPECIES 6 ENSCSEG00000003193 aurkb (ENSCSEG00000003195) ENSCSEG00000003206 COPS6 (ENSCSEG00000003213) ENSCSEG00000003221 mcm7 (ENSCSEG00000003225) ENSCSEG00000003242 ENSCSEG00000003246 gpc2 (ENSCSEG00000003250) ITGA6 (ENSCSEG00000003251) ENSCSEG00000003264 ENSCSEG00000003269 ENSCSEG00000003285 slit3 (ENSCSEG00000003303) ENSCSEG00000003359 fgfrl1a (ENSCSEG00000003362) #22 ENSCSEG00000003375 #23 ENSCSEG00000003385 maea (ENSCSEG00000003393) #26 spon2b (ENSCSEG00000003405) #24 zgc:136929 (ENSCSEG00000003417) #25 hnrnpa0b (ENSCSEG00000003421) KLHL3 (ENSCSEG00000003437) ENSCSEG00000003453 tdo2a (ENSCSEG00000003467) asb5a (ENSCSEG00000003474) gpm6aa (ENSCSEG00000003489) lrit3a (ENSCSEG00000003496) egf (ENSCSEG00000003504) elovl6 (ENSCSEG00000003513) pitx2 (ENSCSEG00000003514) Carangaria_A ANCESTRAL SPECIES 17 ENSGT00940000171832 ENSGT00940000161846 ENSGT00940000160449 ENSGT00940000161833 ENSGT00940000161843 ENSGT00940000156198.c.a ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000165646.B ENSGT00940000167175 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Seriola ANCESTRAL SPECIES 31 ENSGT00940000162676.a.a.x.b ENSGT01030000234530.a.c.b.a.b ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000162676.a.a.y ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.a.b.i ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000162676.a.a.x.a ENSGT01030000234530.a.d.e.b.a.a.b.j ENSGT01030000234530.a.c.b.b.b ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT01040000242632 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000165646.B ENSGT00940000167175 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Greater amberjack MODERN SPECIES 113 ENSSDUG00000003176 ENSSDUG00000003103 ENSSDUG00000003071 ENSSDUG00000003047 ENSSDUG00000002988 ENSSDUG00000002957 ENSSDUG00000002940 ENSSDUG00000002917 ENSSDUG00000002892 ENSSDUG00000002873 ENSSDUG00000002855 ENSSDUG00000002835 ENSSDUG00000002832 ENSSDUG00000002822 slit3 (ENSSDUG00000002721) fgfrl1a (ENSSDUG00000002673) #22 ENSSDUG00000002614 #23 ENSSDUG00000002593 spon2b (ENSSDUG00000002572) #24 zgc:136929 (ENSSDUG00000002539) #25 maea (ENSSDUG00000002472) #26 ENSSDUG00000002431 ENSSDUG00000002394 KLHL3 (ENSSDUG00000002322) fam13b (ENSSDUG00000002262) cxcl14 (ENSSDUG00000002234) LINGO2 (ENSSDUG00000002227) eif4ea (ENSSDUG00000002220) ENSSDUG00000002196 gar1 (ENSSDUG00000002130) zgc:77938 (ENSSDUG00000002118) Yellowtail amberjack MODERN SPECIES 3289 gpc2 (ENSSLDG00000024350) ENSSLDG00000024358 ENSSLDG00000024372 ENSSLDG00000024384 ENSSLDG00000024400 ENSSLDG00000024417 ENSSLDG00000024426 ENSSLDG00000024442 ENSSLDG00000024474 ENSSLDG00000024484 ENSSLDG00000024534 ENSSLDG00000024543 ENSSLDG00000024549 ENSSLDG00000024558 slit3 (ENSSLDG00000024564) fgfrl1a (ENSSLDG00000024618) #22 ENSSLDG00000024626 spon2b (ENSSLDG00000024633) #24 zgc:136929 (ENSSLDG00000024644) #25 maea (ENSSLDG00000024664) #26 ENSSLDG00000024685 ENSSLDG00000024705 KLHL3 (ENSSLDG00000024720) FAT2 (ENSSLDG00000024755) mtnr1al (ENSSLDG00000024810) SLC36A1 (ENSSLDG00000024977) atox1 (ENSSLDG00000024991) sytl4 (ENSSLDG00000025002) trmt12 (ENSSLDG00000025007) zdhhc9 (ENSSLDG00000025009) SASH3 (ENSSLDG00000025019) Barramundi perch MODERN SPECIES 548 ENSLCAG00010016745 fgfrl1a (ENSLCAG00010016740) #22 ENSLCAG00010016737 #23 ENSLCAG00010016735 spon2b (ENSLCAG00010016733) #24 Anabantaria ANCESTRAL SPECIES 15 ENSGT01050000244824.C ENSGT00940000170871 ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000162676.a.a ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Zig-zag eel MODERN SPECIES 1 ENSMAMG00000018403 ENSMAMG00000018159 ENSMAMG00000018577 ENSMAMG00000024275 ENSMAMG00000026889 ENSMAMG00000026853 ENSMAMG00000018102 ENSMAMG00000018220 ENSMAMG00000018422 ENSMAMG00000018006 ENSMAMG00000017999 ENSMAMG00000017992 ENSMAMG00000017973 ENSMAMG00000017967 ENSMAMG00000017823 fgfrl1a (ENSMAMG00000025761) #22 ENSMAMG00000027564 spon2b (ENSMAMG00000017786) #24 CTBP1 (ENSMAMG00000027529) #25 MAEA (ENSMAMG00000017757) #26 ENSMAMG00000017754 ENSMAMG00000017728 ENSMAMG00000017687 ENSMAMG00000017652 cxcl14 (ENSMAMG00000027577) ENSMAMG00000017630 ENSMAMG00000017620 ENSMAMG00000017599 ENSMAMG00000017583 zgc:77938 (ENSMAMG00000017576) pitx2 (ENSMAMG00000017568) Anabantoidei ANCESTRAL SPECIES 11 ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.b.a.a.b.q ENSGT01030000234530.a.d.e.b.a.a.b ENSGT00940000170413.B ENSGT01030000234530.a.c.b.a.b ENSGT00940000162676.a.a ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00950000183123 ENSGT00940000153147.a.a ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Climbing perch MODERN SPECIES 1 ENSATEG00000025310 ENSATEG00000029997 ENSATEG00000002552 ENSATEG00000002604 ENSATEG00000002646 ENSATEG00000002759 ENSATEG00000002839 ENSATEG00000030030 ENSATEG00000002846 ENSATEG00000002959 ENSATEG00000027620 ENSATEG00000002929 ENSATEG00000003017 ENSATEG00000003020 ENSATEG00000003059 fgfrl1a (ENSATEG00000003292) #22 ENSATEG00000003335 spon2b (ENSATEG00000003357) #24 CTBP1 (ENSATEG00000003381) #25 MAEA (ENSATEG00000003418) #26 ENSATEG00000003423 ENSATEG00000003468 ENSATEG00000003526 ENSATEG00000003585 cxcl14 (ENSATEG00000026931) ENSATEG00000003631 ENSATEG00000003645 ENSATEG00000003684 ENSATEG00000003733 zgc:77938 (ENSATEG00000003739) pitx2 (ENSATEG00000003773) Siamese fighting fish MODERN SPECIES 1 ENSBSLG00000011901 ENSBSLG00000011914 ENSBSLG00000011941 ENSBSLG00000011950 ENSBSLG00000011965 ENSBSLG00000011989 ENSBSLG00000012034 ENSBSLG00000012092 ENSBSLG00000012100 ENSBSLG00000012116 ENSBSLG00000012129 ENSBSLG00000012196 ENSBSLG00000012199 ENSBSLG00000012210 slit3 (ENSBSLG00000012410) fgfrl1a (ENSBSLG00000016120) #22 ENSBSLG00000016605 #23 ENSBSLG00000016743 spon2b (ENSBSLG00000017015) #24 zgc:136929 (ENSBSLG00000017079) #25 ENSBSLG00000017634 maea (ENSBSLG00000017650) #26 ENSBSLG00000017718 ENSBSLG00000017722 KLHL3 (ENSBSLG00000017755) fam13b (ENSBSLG00000017811) cxcl14 (ENSBSLG00000018003) LINGO2 (ENSBSLG00000018021) ENSBSLG00000018023 ENSBSLG00000018027 ENSBSLG00000018169 Eupercaria ANCESTRAL SPECIES 12 ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.c.b.a.b ENSGT00940000170413.B ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Tetraodontidae ANCESTRAL SPECIES 9 ENSGT00940000160595.b ENSGT00940000160449 ENSGT00940000161833 ENSGT00940000161843 ENSGT00940000156198.c.a ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT00940000162676.a.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00940000167175 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Fugu MODERN SPECIES 5 ENSTRUG00000030499 ENSTRUG00000033390 ENSTRUG00000027161 ENSTRUG00000033022 ENSTRUG00000030017 ENSTRUG00000027453 ENSTRUG00000030501 ENSTRUG00000028475 ENSTRUG00000026725 ENSTRUG00000033377 ENSTRUG00000029835 ENSTRUG00000028984 ENSTRUG00000032931 ENSTRUG00000014929 slit3 (ENSTRUG00000014930) fgfrl1a (ENSTRUG00000015192) #22 ENSTRUG00000030160 #23 ENSTRUG00000015229 maea (ENSTRUG00000015332) #26 spon2 (ENSTRUG00000015262) #24 zgc:136929 (ENSTRUG00000015287) #25 hnrnpa0b (ENSTRUG00000015362) ENSTRUG00000021494 KLHL3 (ENSTRUG00000015376) fam13b (ENSTRUG00000015447) cxcl14 (ENSTRUG00000024992) LINGO2 (ENSTRUG00000015501) eif4ea (ENSTRUG00000024250) ENSTRUG00000015516 gar1 (ENSTRUG00000020580) zgc:77938 (ENSTRUG00000015558) Eupecaria_A ANCESTRAL SPECIES 13 ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.c.b.a.b ENSGT00940000170413.B.c ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.b ENSGT00940000157645.e.a.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Ballan wrasse MODERN SPECIES 622 fgfrl1a (ENSLBEG00000015755) #22 ENSLBEG00000015695 #23 adh5l (ENSLBEG00000015673) gar1 (ENSLBEG00000015647) ENSLBEG00000015597 eif4ea (ENSLBEG00000015557) ENSLBEG00000015520 Eupecaria_B ANCESTRAL SPECIES 13 ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.c.b.a.b ENSGT00940000170413.B.c ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.b ENSGT00940000157645.e.a.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000153147.a.a ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b Eupecaria_C ANCESTRAL SPECIES 12 ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT00940000177190 ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000162676.a.a ENSGT00940000170413.B.d ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.b ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a.b ENSGT00940000157645.e.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Gilthead seabream MODERN SPECIES 9 ENSSAUG00010023006 ENSSAUG00010023007 ENSSAUG00010023008 ENSSAUG00010023009 ENSSAUG00010023011 ENSSAUG00010023013 ENSSAUG00010023014 ENSSAUG00010023015 nitr13 (ENSSAUG00010023016) ENSSAUG00010023018 ENSSAUG00010023019 ENSSAUG00010023020 ENSSAUG00010023022 ENSSAUG00010023023 slit3 (ENSSAUG00010023026) fgfrl1a (ENSSAUG00010023271) #22 ENSSAUG00010023273 #23 ENSSAUG00010023275 spon2b (ENSSAUG00010023276) #24 zgc:136929 (ENSSAUG00010023293) #25 maea (ENSSAUG00010024088) #26 HNRNPA0 (ENSSAUG00010024095) ENSSAUG00010024097 KLHL3 (ENSSAUG00010024099) fam13b (ENSSAUG00010024105) cxcl14 (ENSSAUG00010024114) LINGO2 (ENSSAUG00010024119) eif4ea (ENSSAUG00010024126) ENSSAUG00010024185 gar1 (ENSSAUG00010024603) zgc:77938 (ENSSAUG00010024605) Eupercaria_incertae_sedis ANCESTRAL SPECIES 39 ENSGT00940000170413.B.c ENSGT01030000234530.a.c.b.a.b ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000162676.a.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.a.b ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a.b ENSGT00940000157645.e.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 European seabass MODERN SPECIES 12 ENSDLAG00005018500 ENSDLAG00005004047 ENSDLAG00005007241 ENSDLAG00005004032 ENSDLAG00005018323 ENSDLAG00005007108 ENSDLAG00005031729 ENSDLAG00005027547 ENSDLAG00005016849 ENSDLAG00005016829 ENSDLAG00005009257 ENSDLAG00005009255 ENSDLAG00005009253 ENSDLAG00005009247 ENSDLAG00005003204 fgfrl1a (ENSDLAG00005002545) #22 ENSDLAG00005002457 #23 ENSDLAG00005002436 spon2b (ENSDLAG00005002407) #24 CTBP1 (ENSDLAG00005001521) #25 MAEA (ENSDLAG00005001329) #26 ENSDLAG00005001313 ENSDLAG00005001297 ENSDLAG00005001234 ENSDLAG00005023239 cxcl14 (ENSDLAG00005029354) ENSDLAG00005023218 ENSDLAG00005023194 ENSDLAG00005023034 ENSDLAG00005023021 zgc:77938 (ENSDLAG00005022963) Large yellow croaker MODERN SPECIES pde6a (ENSLCRG00005020486) ##11 ENSLCRG00005020469 ARHGEF37 (ENSLCRG00005020468) ELP1 (ENSLCRG00005020427) CPXM1 (ENSLCRG00005019998) SMU1 (ENSLCRG00005019993) CPLX1 (ENSLCRG00005019990) #16 PCGF3 (ENSLCRG00005019989) #15 SLC49A3 (ENSLCRG00005019988) #14 NCBP1 (ENSLCRG00005019984) TSTD2 (ENSLCRG00005019981) SEC24B (ENSLCRG00005018637) hopx (ENSLCRG00005018616) arl9 (ENSLCRG00005018615) slit3 (ENSLCRG00005015375) fgfrl1a (ENSLCRG00005015331) #22 ENSLCRG00005015328 #23 ENSLCRG00005015325 spon2b (ENSLCRG00005015323) #24 zgc:136929 (ENSLCRG00005014374) #25 maea (ENSLCRG00005014353) #26 hnrnpa0b (ENSLCRG00005014351) ENSLCRG00005014350 KLHL3 (ENSLCRG00005014349) fam13b (ENSLCRG00005014346) cxcl14 (ENSLCRG00005014343) FAT2 (ENSLCRG00005013957) mtnr1al (ENSLCRG00005013950) SLC36A1 (ENSLCRG00005013944) atox1 (ENSLCRG00005013942) sparc (ENSLCRG00005013762) Perciformes ANCESTRAL SPECIES 13 ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00940000170871 ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a.b ENSGT00940000157645.e.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Cottioidei ANCESTRAL SPECIES 9 ENSGT00940000161833 ENSGT00940000161843 ENSGT00940000156198.c.a ENSGT00940000158980 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00940000170871 ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT01030000234530.a.d.e.b.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 ENSGT00940000154518.a Lumpfish MODERN SPECIES 1 ENSCLMG00005017941 ENSCLMG00005017943 ENSCLMG00005017946 ENSCLMG00005017948 ENSCLMG00005017949 ENSCLMG00005017952 ENSCLMG00005004268 ENSCLMG00005004277 ENSCLMG00005004288 ENSCLMG00005004328 ENSCLMG00005004425 ENSCLMG00005004442 ENSCLMG00005004469 ENSCLMG00005004500 slit3 (ENSCLMG00005004626) fgfrl1a (ENSCLMG00005004674) #22 ENSCLMG00005004694 spon2b (ENSCLMG00005004748) #24 zgc:136929 (ENSCLMG00005004841) #25 maea (ENSCLMG00005007778) #26 hnrnpa0b (ENSCLMG00005007798) HNRNPA0 (ENSCLMG00005007799) KLHL3 (ENSCLMG00005007803) fam13b (ENSCLMG00005007813) cxcl14 (ENSCLMG00005007814) LINGO2 (ENSCLMG00005007816) eif4ea (ENSCLMG00005007819) ENSCLMG00005007832 gar1 (ENSCLMG00005007940) zgc:77938 (ENSCLMG00005007943) pitx2 (ENSCLMG00005007966) Stickleback MODERN SPECIES 3 ENSGACG00000016372 nkx3-2 (ENSGACG00000016378) ENSGACG00000016380 aurkb (ENSGACG00000016381) ENSGACG00000016387 COPS6 (ENSGACG00000016388) mcm7 (ENSGACG00000016398) gpc2 (ENSGACG00000016402) ENSGACG00000016407 ENSGACG00000016409 slit3 (ENSGACG00000016411) ENSGACG00000016419 ENSGACG00000016422 ENSGACG00000016423 ENSGACG00000016424 fgfrl1a (ENSGACG00000016426) #22 ENSGACG00000016428 spon2b (ENSGACG00000016431) #24 zgc:136929 (ENSGACG00000016437) #25 maea (ENSGACG00000016443) #26 hnrnpa0b (ENSGACG00000016447) ENSGACG00000016449 KLHL3 (ENSGACG00000016452) fam13b (ENSGACG00000016458) cxcl14 (ENSGACG00000016464) LINGO2 (ENSGACG00000016470) eif4ea (ENSGACG00000016472) ENSGACG00000016474 zgc:77938 (ENSGACG00000016479) pitx2 (ENSGACG00000016483) elovl6 (ENSGACG00000016488) Perciformes_a ANCESTRAL SPECIES 11 ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.a.b ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a.b ENSGT00940000157645.e.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000167175 ENSGT00940000168781 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Channel bull blenny MODERN SPECIES 1 ENSCGOG00000010390 ENSCGOG00000010389 ENSCGOG00000010388 ENSCGOG00000010387 ENSCGOG00000010382 ENSCGOG00000010379 ENSCGOG00000010373 ENSCGOG00000010370 ENSCGOG00000010364 ENSCGOG00000010361 ENSCGOG00000010360 ENSCGOG00000010357 zp3f.2 (ENSCGOG00000010329) ENSCGOG00000010326 ENSCGOG00000010321 fgfrl1a (ENSCGOG00000010315) #22 ENSCGOG00000010311 #23 ENSCGOG00000010249 spon2b (ENSCGOG00000010244) #24 zgc:136929 (ENSCGOG00000010199) #25 maea (ENSCGOG00000010098) #26 ENSCGOG00000010096 HNRNPA0 (ENSCGOG00000010091) KLHL3 (ENSCGOG00000009950) fam13b (ENSCGOG00000009469) cxcl14 (ENSCGOG00000009462) LINGO2 (ENSCGOG00000009460) eif4ea (ENSCGOG00000009457) ENSCGOG00000008758 gar1 (ENSCGOG00000008734) zgc:77938 (ENSCGOG00000008460) Pike perch MODERN SPECIES 18 ENSSLUG00000024046 ENSSLUG00000024037 ENSSLUG00000024028 ENSSLUG00000024027 ENSSLUG00000024024 ENSSLUG00000024021 ENSSLUG00000024018 ENSSLUG00000024010 ENSSLUG00000024006 ENSSLUG00000023998 ENSSLUG00000023993 ENSSLUG00000023988 ENSSLUG00000023986 ENSSLUG00000023984 slit3 (ENSSLUG00000023660) fgfrl1a (ENSSLUG00000023537) #22 ENSSLUG00000023520 #23 ENSSLUG00000023515 spon2b (ENSSLUG00000023507) #24 zgc:136929 (ENSSLUG00000022877) #25 maea (ENSSLUG00000022782) #26 hnrnpa0b (ENSSLUG00000022778) ENSSLUG00000022773 KLHL3 (ENSSLUG00000022764) fam13b (ENSSLUG00000022722) cxcl14 (ENSSLUG00000022709) LINGO2 (ENSSLUG00000022705) Ovalentaria ANCESTRAL SPECIES 15 ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b.s ENSGT01030000234530.a.c.b.b.a.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.a.b.t.a ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00950000183123 ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a Ovalentaria_B ANCESTRAL SPECIES 13 ENSGT01030000234530.a.c.b.a.b.s ENSGT00940000170413.A ENSGT00950000182968.d.b.a.a.b ENSGT01030000234530.a.c.b.b.a.a.b ENSGT01030000234530.a.c.b.a.b.t.a ENSGT00940000162676.a.a ENSGT01030000234530.a.d.e.b.a.a.b ENSGT00950000182968.d.b.a.b ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000165646.B ENSGT00940000167175.d ENSGT00940000153147.a.a ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a Pomacentridae ANCESTRAL SPECIES 99 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 ENSGT00940000154518.a Pomacentridae_A ANCESTRAL SPECIES 20 ENSGT00390000003354 ENSGT00950000183073.a.a.b ENSGT00390000005067.a ENSGT01050000244824.C ENSGT00950000182972.a.b ENSGT01050000244897.a.a.a ENSGT00940000155353.b ENSGT00950000182968.d.b.a.a.b ENSGT00940000162676.a.a ENSGT01030000234530.a.c.b.a.b.t.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.b ENSGT00940000170413.A ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 ENSGT00940000154518.a Amphiprion ANCESTRAL SPECIES 110 ENSGT01030000234530.a.c.b.a.b.t.a.d.b ENSGT00940000162676.a.a.o.a ENSGT00940000173984 ENSGT00940000162676.a.a.p ENSGT01030000234530.a.c.b.b.a.a.b ENSGT01030000234530.a.c.b.a.b.t.a.d.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.b.b.a ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000167175.c ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 ENSGT00940000154518.a Clown anemonefish MODERN SPECIES 1716 slit3 (ENSAOCG00000003300) fgfrl1a (ENSAOCG00000003274) #22 Orange clownfish MODERN SPECIES 4 ENSAPEG00000003254 ENSAPEG00000003229 ENSAPEG00000003212 ENSAPEG00000003185 ENSAPEG00000003169 ENSAPEG00000003140 ENSAPEG00000003078 ENSAPEG00000003067 ENSAPEG00000003030 ENSAPEG00000002954 ENSAPEG00000002935 ENSAPEG00000002882 ENSAPEG00000002814 ENSAPEG00000002766 slit3 (ENSAPEG00000002657) fgfrl1a (ENSAPEG00000002453) #22 ENSAPEG00000002409 spon2b (ENSAPEG00000002387) #24 zgc:136929 (ENSAPEG00000002347) #25 maea (ENSAPEG00000002314) #26 ENSAPEG00000002274 ENSAPEG00000002224 KLHL3 (ENSAPEG00000002167) fam13b (ENSAPEG00000002131) cxcl14 (ENSAPEG00000002109) ENSAPEG00000002097 LINGO2 (ENSAPEG00000002091) eif4ea (ENSAPEG00000001758) ENSAPEG00000001690 gar1 (ENSAPEG00000001676) zgc:77938 (ENSAPEG00000001665) Spiny chromis MODERN SPECIES 357 ENSAPOG00000007863 slit3 (ENSAPOG00000007984) fgfrl1a (ENSAPOG00000008028) #22 ENSAPOG00000008057 spon2b (ENSAPOG00000008090) #24 zgc:136929 (ENSAPOG00000008144) #25 Bicolor damselfish MODERN SPECIES 1064 ENSSPAG00000021300 fgfrl1a (ENSSPAG00000021286) #22 ENSSPAG00000021271 spon2b (ENSSPAG00000021253) #24 zgc:136929 (ENSSPAG00000021226) #25 maea (ENSSPAG00000021192) #26 hnrnpa0b (ENSSPAG00000021157) Cichlidae ANCESTRAL SPECIES 8 ENSGT01030000234530.a.c.b.a.b.s.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000165646.B ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 Pseudocrenilabrinae ANCESTRAL SPECIES 27 ENSGT01030000234530.a.c.b.a.b.s.b.a.a.b.a.b.b.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.a.a.a ENSGT01030000234530.a.c.b.a.b.s.b.a.a.b.a.a.a ENSGT01030000234530.a.c.b.a.b.s.b.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.b.b ENSGT01030000234530.a.c.b.a.b.s.b.b.a.a.b ENSGT01030000234530.a.c.b.b.a.a.b.c ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b.i ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000154808.a.b.l ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b Pseudocrenilabrinae_A ANCESTRAL SPECIES 31 ENSGT01030000234530.a.c.b.a.b.s.b.a.a.b.a.a.a ENSGT01030000234530.a.c.b.a.b.s.b.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.b.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.b.a.a ENSGT01030000234530.a.c.b.a.b.s.b.b.a.a.b ENSGT01030000234530.a.c.b.b.a.a.b.c ENSGT00940000162676.a.a.m.b ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b.i ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Haplochromini ANCESTRAL SPECIES 25 ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.b ENSGT00940000170413.A.a.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.b.a.a.d ENSGT01030000234530.a.c.b.a.b.s.b.b.a.a.b ENSGT00950000182968.d.b.a.a.a.v.b ENSGT01030000234530.a.c.b.a.b.s.a.a ENSGT01030000234530.a.c.b.a.b.s.b.b.a.a.a.a.b ENSGT00940000162676.a.a.n ENSGT00950000182968.d.b.a.a.a.u.a ENSGT01030000234530.a.c.b.b.a.b.i ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Burton s mouthbrooder MODERN SPECIES 299 ENSHBUG00000023795 ENSHBUG00000023831 ENSHBUG00000023884 ENSHBUG00000023883 ENSHBUG00000023882 ENSHBUG00000023881 ENSHBUG00000023880 ENSHBUG00000023879 ENSHBUG00000023878 ENSHBUG00000023877 slit3 (ENSHBUG00000023875) fgfrl1a (ENSHBUG00000023874) #22 ENSHBUG00000023873 #23 ENSHBUG00000023872 spon2b (ENSHBUG00000023871) #24 zgc:136929 (ENSHBUG00000023870) #25 maea (ENSHBUG00000023869) #26 HNRNPA0 (ENSHBUG00000023868) ENSHBUG00000023867 ENSHBUG00000023866 fam13b (ENSHBUG00000023865) cxcl14 (ENSHBUG00000023864) LINGO2 (ENSHBUG00000023863) eif4ea (ENSHBUG00000023862) ENSHBUG00000023861 gar1 (ENSHBUG00000023860) zgc:77938 (ENSHBUG00000023859) Haplochromini_A ANCESTRAL SPECIES 28 ENSGT01030000234530.a.d.e.b.b.h.a.c.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.b.a.b.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.b.a.b.a.a ENSGT01030000234530.a.d.e.b.b.h.a.c.a.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.b.a.b.b.a ENSGT01030000234530.a.d.e.b.b.g.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.b ENSGT00940000170413.A.a.a.b ENSGT01030000234530.a.d.e.b.a.a.b.b.a.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.b.a.b.b ENSGT01030000234530.a.c.b.a.b.s.b.a.a.a.a.b.a.a.d ENSGT01030000234530.a.c.b.a.b.s.b.b.a.a.b ENSGT01030000234530.a.c.b.a.a.a.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Haplochromini_B ANCESTRAL SPECIES 45 ENSGT01030000234530.a.c.b.b.a.a.b.d.b.b.b ENSGT01030000234530.a.c.b.a.b.s.a.b ENSGT00950000182968.d.b.a.a.a.u.a ENSGT01030000234530.a.c.b.b.a.b.i.a ENSGT01030000234530.a.d.e.b.a.a.a.m ENSGT01030000234530.a.c.b.a.a.a.a ENSGT01030000234530.a.c.b.b.a.a.a.b.d ENSGT01030000234530.a.c.b.b.a.a.a.b.c ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175.d ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Zebra mbuna MODERN SPECIES 1102 ENSMZEG00005000412 ENSMZEG00005000444 ENSMZEG00005000462 ENSMZEG00005000491 ENSMZEG00005000509 ENSMZEG00005000536 ENSMZEG00005000558 ENSMZEG00005000575 ENSMZEG00005000596 ENSMZEG00005000626 ENSMZEG00005000644 ENSMZEG00005000650 ENSMZEG00005000706 ENSMZEG00005000725 slit3 (ENSMZEG00005000754) fgfrl1a (ENSMZEG00005000881) #22 ENSMZEG00005000921 spon2b (ENSMZEG00005000941) #24 zgc:136929 (ENSMZEG00005000965) #25 maea (ENSMZEG00005001004) #26 HNRNPA0 (ENSMZEG00005001055) ENSMZEG00005001063 KLHL3 (ENSMZEG00005001097) fam13b (ENSMZEG00005001152) cxcl14 (ENSMZEG00005001209) ENSMZEG00005001221 LINGO2 (ENSMZEG00005001231) ENSMZEG00005001237 eif4ea (ENSMZEG00005001254) ENSMZEG00005001266 gar1 (ENSMZEG00005001281) Eastern happy MODERN SPECIES 11 nitr13 (ENSACLG00000008707) ENSACLG00000008712 ENSACLG00000008716 ENSACLG00000008718 ENSACLG00000008729 ENSACLG00000008745 ENSACLG00000008748 ENSACLG00000008752 ENSACLG00000008759 ENSACLG00000008764 ENSACLG00000008768 ENSACLG00000008772 ENSACLG00000008776 ENSACLG00000008780 slit3 (ENSACLG00000008796) fgfrl1a (ENSACLG00000008895) #22 ENSACLG00000008906 #23 ENSACLG00000008916 spon2b (ENSACLG00000008926) #24 zgc:136929 (ENSACLG00000008935) #25 ENSACLG00000008947 maea (ENSACLG00000008954) #26 HNRNPA0 (ENSACLG00000008973) ENSACLG00000008978 KLHL3 (ENSACLG00000009006) fam13b (ENSACLG00000009048) cxcl14 (ENSACLG00000009437) LINGO2 (ENSACLG00000009441) ENSACLG00000009807 eif4ea (ENSACLG00000009996) ENSACLG00000010003 P. nyererei MODERN SPECIES 315 ENSPNYG00000020369 ENSPNYG00000020414 ENSPNYG00000020459 ENSPNYG00000020476 slit3 (ENSPNYG00000020486) fgfrl1a (ENSPNYG00000020579) #22 ENSPNYG00000020600 spon2b (ENSPNYG00000020614) #24 zgc:136929 (ENSPNYG00000020630) #25 maea (ENSPNYG00000020697) #26 ENSPNYG00000020729 ENSPNYG00000020763 KLHL3 (ENSPNYG00000020787) fam13b (ENSPNYG00000020838) cxcl14 (ENSPNYG00000020877) LINGO2 (ENSPNYG00000020886) eif4ea (ENSPNYG00000020891) ENSPNYG00000020903 gar1 (ENSPNYG00000020926) zgc:77938 (ENSPNYG00000020967) pitx2 (ENSPNYG00000020980) Lyretail cichlid MODERN SPECIES 415 ENSNBRG00000013915 ENSNBRG00000013935 ENSNBRG00000013952 ENSNBRG00000013970 ENSNBRG00000013984 ENSNBRG00000014034 ENSNBRG00000014082 ENSNBRG00000014111 ENSNBRG00000014119 ENSNBRG00000014132 ENSNBRG00000014160 ENSNBRG00000014173 ENSNBRG00000014212 ENSNBRG00000014223 slit3 (ENSNBRG00000014236) fgfrl1a (ENSNBRG00000014355) #22 ENSNBRG00000014380 spon2b (ENSNBRG00000014396) #24 zgc:136929 (ENSNBRG00000014412) #25 maea (ENSNBRG00000014438) #26 ENSNBRG00000014469 ENSNBRG00000014522 KLHL3 (ENSNBRG00000014552) fam13b (ENSNBRG00000014591) cxcl14 (ENSNBRG00000014631) LINGO2 (ENSNBRG00000014642) eif4ea (ENSNBRG00000014676) ENSNBRG00000014807 gar1 (ENSNBRG00000014828) adh5l (ENSNBRG00000014912) Nile tilapia MODERN SPECIES 11 ENSONIG00000038524 ENSONIG00000039835 ENSONIG00000019890 ENSONIG00000019888 ENSONIG00000043164 ENSONIG00000000946 ENSONIG00000000972 ENSONIG00000000981 ENSONIG00000000982 ENSONIG00000000986 ENSONIG00000040469 ENSONIG00000000987 ENSONIG00000000979 ENSONIG00000020948 slit3 (ENSONIG00000000988) fgfrl1a (ENSONIG00000001038) #22 ENSONIG00000032367 #23 ENSONIG00000042977 spon2b (ENSONIG00000001044) #24 zgc:136929 (ENSONIG00000001046) #25 maea (ENSONIG00000001054) #26 hnrnpa0b (ENSONIG00000037027) ENSONIG00000042129 KLHL3 (ENSONIG00000001059) fam13b (ENSONIG00000001068) cxcl14 (ENSONIG00000033809) LINGO2 (ENSONIG00000020949) ENSONIG00000037748 eif4ea (ENSONIG00000029613) ENSONIG00000001078 gar1 (ENSONIG00000001085) Midas cichlid MODERN SPECIES 1096 ENSACIG00000022037 ENSACIG00000022015 ENSACIG00000021999 ENSACIG00000021992 slit3 (ENSACIG00000021930) fgfrl1a (ENSACIG00000021910) #22 ENSACIG00000021900 spon2b (ENSACIG00000021886) #24 zgc:136929 (ENSACIG00000021871) #25 maea (ENSACIG00000021858) #26 HNRNPA0 (ENSACIG00000021834) ENSACIG00000021815 KLHL3 (ENSACIG00000021783) fam13b (ENSACIG00000021699) cxcl14 (ENSACIG00000021683) LINGO2 (ENSACIG00000021678) eif4ea (ENSACIG00000021637) Atherinomorphae ANCESTRAL SPECIES 9 ENSGT01030000234530.a.c.b.a.b.t.b ENSGT00940000170413.B ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT00950000182968.d.b.a.a.a ENSGT00940000173984 ENSGT01030000234530.a.c.b.b.a.a.b.b ENSGT01030000234530.a.c.b.a.b.t.a ENSGT00940000162676.a.a ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.d.e.b.a.a.b ENSGT01030000234530.a.c.b.b.a.b ENSGT01030000234530.a.d.e.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00950000183123 ENSGT00940000167175 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a Oryzias ANCESTRAL SPECIES 33 ENSGT00940000155353.b ENSGT01030000234530.a.c.b.b.a.b.a ENSGT00950000182968.d.b.a.a.a ENSGT00940000173984.r.a ENSGT01030000234530.a.d.e.b.b.k.b.a ENSGT01030000234530.a.d.e.b.b.l.a ENSGT01030000234530.a.d.e.b.b.k.a.b ENSGT01030000234530.a.d.e.b.b.k.a.a ENSGT01030000234530.a.d.e.b.b.k.b.b ENSGT01030000234530.a.d.e.b.b.l.b ENSGT01030000234530.a.c.b.b.a.a.b.a ENSGT00940000173984.r.b ENSGT01030000234530.a.d.e.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a Oryzias_b ANCESTRAL SPECIES 23 ENSGT00940000155353.b ENSGT01030000234530.a.c.b.b.a.b.a ENSGT00950000182968.d.b.a.a.a ENSGT00940000173984.r.a ENSGT01030000234530.a.d.e.b.b.k.b.a ENSGT01030000234530.a.d.e.b.b.l.a ENSGT01030000234530.a.d.e.b.b.k.a.b ENSGT01030000234530.a.d.e.b.b.k.a.a ENSGT01030000234530.a.d.e.b.b.k.b.b ENSGT01030000234530.a.d.e.b.b.l.b ENSGT01030000234530.a.c.b.b.a.a.b.a ENSGT00940000173984.r.b ENSGT01030000234530.a.d.e.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00950000183123 ENSGT00940000167175.a ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT01090000261097 ENSGT00390000002932 ENSGT00390000005922.b Javanese ricefish DUPLICATION Javanese ricefish MODERN SPECIES 1 ENSOJAG00000012563 ENSOJAG00000012570 ENSOJAG00000012631 ENSOJAG00000012681 ENSOJAG00000012697 ENSOJAG00000012775 ENSOJAG00000012802 ENSOJAG00000012812 ENSOJAG00000012823 ENSOJAG00000012833 ENSOJAG00000012844 ENSOJAG00000012857 ENSOJAG00000012862 ENSOJAG00000012872 slit3 (ENSOJAG00000013112) fgfrl1a (ENSOJAG00000016722) #22 ENSOJAG00000016732 #23 ENSOJAG00000016737 spon2b (ENSOJAG00000016747) #24 zgc:136929 (ENSOJAG00000016765) #25 maea (ENSOJAG00000016904) #26 ENSOJAG00000016953 ENSOJAG00000016962 KLHL3 (ENSOJAG00000016974) fam13b (ENSOJAG00000017074) cxcl14 (ENSOJAG00000017121) LINGO2 (ENSOJAG00000017155) eif4ea (ENSOJAG00000017163) ENSOJAG00000017175 mlsl (ENSOJAG00000017188) hars (ENSOJAG00000017365) Javanese ricefish MODERN SPECIES 78 fgfrl1a (ENSOJAG00000005461) #22 Indian medaka MODERN SPECIES 16 ENSOMEG00000012289 ENSOMEG00000012272 ENSOMEG00000000308 ENSOMEG00000012244 ENSOMEG00000012221 ENSOMEG00000012205 ENSOMEG00000012185 ENSOMEG00000012128 ENSOMEG00000012097 ENSOMEG00000012088 ENSOMEG00000012076 ENSOMEG00000012059 ENSOMEG00000012045 ENSOMEG00000012035 slit3 (ENSOMEG00000012015) fgfrl1a (ENSOMEG00000011920) #22 ENSOMEG00000011856 #23 ENSOMEG00000011827 spon2b (ENSOMEG00000011816) #24 zgc:136929 (ENSOMEG00000011793) #25 maea (ENSOMEG00000011733) #26 ENSOMEG00000011670 KLHL3 (ENSOMEG00000011648) fam13b (ENSOMEG00000011594) cxcl14 (ENSOMEG00000011511) LINGO2 (ENSOMEG00000011496) eif4ea (ENSOMEG00000011486) ENSOMEG00000011471 mlsl (ENSOMEG00000011463) hars (ENSOMEG00000011434) dnd1 (ENSOMEG00000011374) Oryzias_a ANCESTRAL SPECIES 19 ENSGT01030000234530.a.c.b.b.a.b.a ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.c.b.b.a.b.b ENSGT00940000173984.r.a ENSGT01030000234530.a.d.e.b.b.k.b.a ENSGT01030000234530.a.d.e.b.b.l.a ENSGT01030000234530.a.d.e.b.b.k.a.b ENSGT01030000234530.a.d.e.b.b.k.a.a ENSGT01030000234530.a.d.e.b.b.k.b.b ENSGT01030000234530.a.d.e.b.b.l.b ENSGT01030000234530.a.c.b.b.a.a.b.a ENSGT00940000173984.r.b ENSGT01030000234530.a.d.e.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00390000002313 ENSGT00390000008738 #30 ENSGT00390000009871 Chinese medaka MODERN SPECIES 575 slit3 (ENSOSIG00000018869) ENSOSIG00000019712 fgfrl1a (ENSOSIG00000019715) #22 ENSOSIG00000019720 #23 spon2b (ENSOSIG00000019725) #24 zgc:136929 (ENSOSIG00000019737) #25 Japanese Medaka HdrR MODERN SPECIES 1 ENSORLG00000027260 ENSORLG00000025501 ENSORLG00000000389 nitr22 (ENSORLG00000000381) nitr20 (ENSORLG00000000367) ENSORLG00000000366 ENSORLG00000000357 ENSORLG00000000348 ENSORLG00000020285 ENSORLG00000025336 ENSORLG00000028138 ENSORLG00000022885 ENSORLG00000030644 slit3 (ENSORLG00000000335) ENSORLG00000028622 fgfrl1a (ENSORLG00000000305) #22 ENSORLG00000000293 spon2b (ENSORLG00000000275) #24 zgc:136929 (ENSORLG00000000259) #25 maea (ENSORLG00000000230) #26 ENSORLG00000022539 ENSORLG00000027074 ENSORLG00000024157 ENSORLG00000024793 KLHL3 (ENSORLG00000000214) fam13b (ENSORLG00000000207) cxcl14 (ENSORLG00000000201) ENSORLG00000026571 LINGO2 (ENSORLG00000000190) eif4ea (ENSORLG00000020641) immt (ENSORLG00000020645) Cyprinodontiformes ANCESTRAL SPECIES 8 ENSGT01030000234530.a.c.b.b.a.a.a.b ENSGT01030000234530.a.c.b.a.b.t.a ENSGT01030000234530.a.c.b.b.a.a.b.b ENSGT01030000234530.a.c.b.a.b.t.b.b.b ENSGT00940000170413.B.a.a ENSGT00940000173984 ENSGT00950000182968.d.b.a.a.a ENSGT01030000234530.a.d.e.a ENSGT00940000177190 ENSGT01030000234530.a.d.e.b.a.a.a ENSGT01030000234530.a.c.b.a.a ENSGT01030000234530.a.d.e.b.a.a.b ENSGT01030000234530.a.c.b.b.a.b ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Aplocheiloidei ANCESTRAL SPECIES 13 ENSGT01030000234530.a.d.e.b.b ENSGT01030000234530.a.c.b.a.b.t.b.a.b.b ENSGT00940000170413.B.a.b ENSGT01030000234530.a.c.b.a.b.t.b.a.b.a ENSGT01030000234530.a.c.b.b.a.a.b.a ENSGT01030000234530.a.c.b.a.b.t.b.b.a ENSGT01030000234530.a.c.b.a.b.t.b.a.a.b ENSGT01030000234530.a.c.b.a.b.t.b.a.a.a ENSGT00940000170413.B.a.a ENSGT00940000173984 ENSGT01030000234530.a.d.e.a ENSGT01030000234530.a.d.e.b.a.a.a ENSGT00950000182968.d.b.a.a.a ENSGT00940000157645.e.a ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000153147.a.a ENSGT00950000183123 ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 ENSGT00940000154518.a Mangrove rivulus MODERN SPECIES 40 ENSKMAG00000011274 ENSKMAG00000011236 ENSKMAG00000011206 ENSKMAG00000011180 ENSKMAG00000011160 ENSKMAG00000011151 ENSKMAG00000011125 ENSKMAG00000011105 ENSKMAG00000011093 slit3 (ENSKMAG00000010979) fgfrl1a (ENSKMAG00000010924) #22 ENSKMAG00000010913 spon2b (ENSKMAG00000010887) #24 zgc:136929 (ENSKMAG00000010853) #25 maea (ENSKMAG00000010808) #26 ENSKMAG00000010760 KLHL3 (ENSKMAG00000010712) fam13b (ENSKMAG00000010593) cxcl14 (ENSKMAG00000010539) LINGO2 (ENSKMAG00000010529) eif4ea (ENSKMAG00000010510) ENSKMAG00000010476 ENSKMAG00000010421 gar1 (ENSKMAG00000010402) TUBE1 (ENSKMAG00000010381) zgc:77938 (ENSKMAG00000010357) Turquoise killifish MODERN SPECIES 1610 MCM7 (ENSNFUG00015002038) ENSNFUG00015002082 ENSNFUG00015002084 ENSNFUG00015002087 GPC6L (ENSNFUG00015002103) ENSNFUG00015002143 ENSNFUG00015002201 ENSNFUG00015002212 ENSNFUG00015002218 Nfu_g_1_004472 (ENSNFUG00015002237) ENSNFUG00015002254 ENSNFUG00015002290 ENSNFUG00015002293 ENSNFUG00015002297 slit3 (ENSNFUG00015002545) FGFRL1A (ENSNFUG00015003941) #22 ENSNFUG00015003946 ENSNFUG00015003957 spon2b (ENSNFUG00015003985) #24 ENSNFUG00015003988 ENSNFUG00015003989 zgc:136929 (ENSNFUG00015004023) #25 maea (ENSNFUG00015004184) #26 hnrnpa0b (ENSNFUG00015004193) ENSNFUG00015004196 KLHL3 (ENSNFUG00015004210) fam13b (ENSNFUG00015004254) ENSNFUG00015004307 ENSNFUG00015004310 ENSNFUG00015004314 ENSNFUG00015004316 Cyprinodontoidei ANCESTRAL SPECIES 23 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 #19 ENSGT00940000156526.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Poeciliinae ANCESTRAL SPECIES 11 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 #19 ENSGT00940000156526.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 Poecilia ANCESTRAL SPECIES 43 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 #19 ENSGT00940000156526.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000167175 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a ENSGT00940000154194.c.a ENSGT00940000164379.e.b ENSGT00730000111223 ENSGT00940000167634 NAME_6 ANCESTRAL SPECIES 386 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 Amazon molly MODERN SPECIES 708 ABCA1 (ENSPFOG00000000370) nipsnap3a (ENSPFOG00000001454) noa1 (ENSPFOG00000001578) ARAP3 (ENSPFOG00000001918) ENSPFOG00000002528 tgfbi (ENSPFOG00000002709) exosc3 (ENSPFOG00000002984) b4galt1l (ENSPFOG00000003048) rest (ENSPFOG00000003274) F2RL3 (ENSPFOG00000020514) ENSPFOG00000003351 fgfrl1a (ENSPFOG00000003381) #22 ENSPFOG00000024021 ENSPFOG00000003467 spon2b (ENSPFOG00000003474) #24 zgc:136929 (ENSPFOG00000003535) #25 maea (ENSPFOG00000003711) #26 ENSPFOG00000020515 ENSPFOG00000003857 KLHL3 (ENSPFOG00000003875) fam13b (ENSPFOG00000004272) cxcl14 (ENSPFOG00000004576) Sailfin molly MODERN SPECIES 798 fgfrl1a (ENSPLAG00000015312) #22 ENSPLAG00000015297 spon2b (ENSPLAG00000015278) #24 zgc:136929 (ENSPLAG00000015265) #25 maea (ENSPLAG00000015250) #26 HNRNPA0 (ENSPLAG00000015223) KLHL3 (ENSPLAG00000015203) fam13b (ENSPLAG00000015165) cxcl14 (ENSPLAG00000015137) Guppy MODERN SPECIES 440 sqstm1 (ENSPREG00000011325) ENSPREG00000011294 selenot2 (ENSPREG00000011276) COX18 (ENSPREG00000011262) igfbp7 (ENSPREG00000011250) ENSPREG00000011233 polr2b (ENSPREG00000011157) ENSPREG00000011137 ENSPREG00000011101 NFKB1 (ENSPREG00000011064) DGKQ (ENSPREG00000011022) #19 mgat4b (ENSPREG00000010989) canx (ENSPREG00000010905) ENSPREG00000010874 slit3 (ENSPREG00000010790) fgfrl1a (ENSPREG00000010756) #22 ENSPREG00000010729 spon2b (ENSPREG00000010719) #24 zgc:136929 (ENSPREG00000010695) #25 maea (ENSPREG00000010640) #26 HNRNPA0 (ENSPREG00000010619) ENSPREG00000010603 ENSPREG00000010595 ENSPREG00000010585 fam13b (ENSPREG00000010514) cxcl14 (ENSPREG00000010487) LINGO2 (ENSPREG00000010461) eif4ea (ENSPREG00000010442) ENSPREG00000010421 gar1 (ENSPREG00000010377) zgc:77938 (ENSPREG00000010355) Platyfish MODERN SPECIES 15 rnf130 (ENSXMAG00000015265) F2RL3 (ENSXMAG00000015278) ENSXMAG00000015279 polr2b (ENSXMAG00000015282) ENSXMAG00000025993 ENSXMAG00000015357 NFKB1 (ENSXMAG00000015369) DGKQ (ENSXMAG00000015446) #19 mgat4b (ENSXMAG00000015489) ENSXMAG00000028503 canx (ENSXMAG00000016067) MAML1 (ENSXMAG00000024495) LTC4S (ENSXMAG00000016063) slit3 (ENSXMAG00000015981) ENSXMAG00000021616 fgfrl1a (ENSXMAG00000027004) #22 ENSXMAG00000022117 ENSXMAG00000026825 ENSXMAG00000008748 spon2b (ENSXMAG00000008749) #24 ENSXMAG00000021984 zgc:136929 (ENSXMAG00000006454) #25 ENSXMAG00000021111 maea (ENSXMAG00000005520) #26 HNRNPA0 (ENSXMAG00000019804) HNRNPA0 (ENSXMAG00000029150) KLHL3 (ENSXMAG00000008532) fam13b (ENSXMAG00000008518) cxcl14 (ENSXMAG00000008516) ENSXMAG00000021320 LINGO2 (ENSXMAG00000019835) NAME_4 ANCESTRAL SPECIES 120 ENSGT00390000010318 ENSGT00390000011725.c ENSGT00530000063506.A ENSGT00530000063555.A.a.a ENSGT01030000234578.A.b.b ENSGT00950000183132.C ENSGT01030000234799 ENSGT00940000153169.A.b.b.e.b ENSGT00940000158625 ENSGT00940000159492 #19 ENSGT00940000156526.a ENSGT00950000182915.a.a.a ENSGT00950000183201.b.b.b.a ENSGT00940000160738 ENSGT00940000159322 ENSGT00940000156736.c.a #22 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000154808.a.b.l ENSGT00940000154808.a.b.k ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000156665.a Sheepshead minnow MODERN SPECIES 196 ENSCVAG00000007612 polr2b (ENSCVAG00000007676) ENSCVAG00000007685 ENSCVAG00000000209 NFKB1 (ENSCVAG00000007771) DGKQ (ENSCVAG00000007796) #19 mgat4b (ENSCVAG00000007902) canx (ENSCVAG00000007944) MAML1 (ENSCVAG00000007997) LTC4S (ENSCVAG00000008009) ENSCVAG00000008016 slit3 (ENSCVAG00000000223) fgfrl1a (ENSCVAG00000008166) #22 ENSCVAG00000008173 spon2b (ENSCVAG00000008186) #24 zgc:136929 (ENSCVAG00000008256) #25 maea (ENSCVAG00000008268) #26 ENSCVAG00000008324 KLHL3 (ENSCVAG00000008416) fam13b (ENSCVAG00000008488) cxcl14 (ENSCVAG00000008499) LINGO2 (ENSCVAG00000000858) Mummichog MODERN SPECIES 251 DGKQ (ENSFHEG00000007049) #19 mgat4b (ENSFHEG00000006957) canx (ENSFHEG00000006895) MAML1 (ENSFHEG00000006828) LTC4S (ENSFHEG00000006817) slit3 (ENSFHEG00000000178) fgfrl1a (ENSFHEG00000006658) #22 ENSFHEG00000006620 spon2b (ENSFHEG00000006598) #24 ENSFHEG00000006591 ARAP3 (ENSFHEG00000006562) noa1 (ENSFHEG00000006213) nipsnap3a (ENSFHEG00000006185) ENSFHEG00000006168 ENSFHEG00000000166 SLC44A1 (ENSFHEG00000006103) TBC1D2 (ENSFHEG00000006085) neurog1 (ENSFHEG00000006076) ENSFHEG00000006062 ENSFHEG00000006055 ENSFHEG00000006033 Pinecone sodierfish MODERN SPECIES 1 ENSMMDG00005001269 ENSMMDG00005001227 ENSMMDG00005001213 ENSMMDG00005001189 ENSMMDG00005001175 ENSMMDG00005001160 ENSMMDG00005001151 ENSMMDG00005001140 ENSMMDG00005001136 ENSMMDG00005001133 ENSMMDG00005001130 ENSMMDG00005001124 ENSMMDG00005001122 ENSMMDG00005001119 slit3 (ENSMMDG00005021105) fgfrl1a (ENSMMDG00005021076) #22 RNF212 (ENSMMDG00005021073) #23 ENSMMDG00005021067 spon2b (ENSMMDG00005021051) #24 zgc:136929 (ENSMMDG00005020944) #25 maea (ENSMMDG00005020929) #26 ENSMMDG00005020923 ENSMMDG00005020918 KLHL3 (ENSMMDG00005020871) fam13b (ENSMMDG00005020855) cxcl14 (ENSMMDG00005020852) ENSMMDG00005020850 LINGO2 (ENSMMDG00005020847) ENSMMDG00005020845 eif4ea (ENSMMDG00005020753) ENSMMDG00005020646 Cod DUPLICATION Cod MODERN SPECIES 18 ENSGMOG00000010445 asb2b (ENSGMOG00000010459) PRIMA1 (ENSGMOG00000029509) UNC79 (ENSGMOG00000010489) ENSGMOG00000023048 BTBD7 (ENSGMOG00000010540) UBR7 (ENSGMOG00000010548) ITPK1 (ENSGMOG00000010561) plk4 (ENSGMOG00000010569) ENSGMOG00000010583 chmp3 (ENSGMOG00000010599) ENSGMOG00000010608 mrpl35 (ENSGMOG00000032296) ENSGMOG00000024164 ENSGMOG00000010628 ENSGMOG00000026023 #22 ENSGMOG00000010654 #31 ENSGMOG00000010679 tdrd9 (ENSGMOG00000010725) ENSGMOG00000022729 RTN1 (ENSGMOG00000010752) LRRC9 (ENSGMOG00000010757) pcnx4 (ENSGMOG00000010786) dhrs7 (ENSGMOG00000010802) ppm1aa (ENSGMOG00000010817) six6a (ENSGMOG00000010821) six1a (ENSGMOG00000010826) six4a (ENSGMOG00000028782) mnat1 (ENSGMOG00000010848) trmt5 (ENSGMOG00000010858) slc38a6 (ENSGMOG00000010865) Cod MODERN SPECIES 1 ENSGMOG00000019154 ##16 slc25a48 (ENSGMOG00000019144) glra1 (ENSGMOG00000015249) g3bp1 (ENSGMOG00000019345) sparc (ENSGMOG00000019341) atox1 (ENSGMOG00000023345) ENSGMOG00000027688 mtnr1al (ENSGMOG00000017372) ENSGMOG00000017306 ENSGMOG00000027232 ENSGMOG00000023439 ENSGMOG00000030450 ENSGMOG00000032320 ENSGMOG00000034466 ENSGMOG00000018735 fgfrl1a (ENSGMOG00000023341) #22 ENSGMOG00000025445 #23 ENSGMOG00000017156 spon2b (ENSGMOG00000028338) #24 ENSGMOG00000016206 ENSGMOG00000033444 ENSGMOG00000011503 ENSGMOG00000011494 ENSGMOG00000029418 TIMM8A (ENSGMOG00000030334) ENSGMOG00000011470 ENSGMOG00000011463 gla (ENSGMOG00000011455) glra4a (ENSGMOG00000011442) ENSGMOG00000023225 DIAPH2 (ENSGMOG00000033358) Otomorpha ANCESTRAL SPECIES 310 ENSGT00940000163031.b.b ENSGT00390000017614.f ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162571.c.b ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00390000009871 ENSGT00390000008738 #30 Otophysi ANCESTRAL SPECIES 10 ENSGT00390000002866.b ENSGT00510000052596.a ENSGT00940000163031.b.b ENSGT00390000017614.f ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162571.c.a ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00390000016928.d ENSGT00940000153713.B.c ENSGT00940000158505.n.a ENSGT00940000157622.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d ENSGT00950000183159.a.v.b ENSGT00940000155317.a.b ENSGT00940000160403 ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00390000002866.b.m ENSGT00510000052596.a ENSGT00940000163031.b.b ENSGT00390000017614.f.a.b ENSGT00390000017614.f.a.a ENSGT00390000017614.f.b ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000159942.b ENSGT00940000160863 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999.c ENSGT00940000159900 #24 ENSGT00390000016928.d ENSGT00940000153713.B.c ENSGT00940000158505.n.a ENSGT00940000157622.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d ENSGT00950000183159.a.v.b Cyprininae DUPLICATION Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 1401 ENSGT00940000156736.c.a.g.a #22 ENSGT00940000160999.c.a.b Cyprininae_a ANCESTRAL SPECIES 480 ENSGT00940000162571.c.a ENSGT00940000159942.b.c ENSGT00940000160863.b ENSGT00940000160863.a.b ENSGT00390000011725.c.a ENSGT00390000010318.bc.b ENSGT00940000156736.c.a.g.a #22 ENSGT00940000160999.c.a.b ENSGT00940000159900.b #24 ENSGT00390000016928.d.f ENSGT00940000153713.B.c.u ENSGT00940000158505.n.a.f ENSGT00940000159958.d.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d.a ENSGT00950000183159.a.v.b ENSGT00390000008738.h #30 Common carp reference MODERN SPECIES 20 zgc:66433 (ENSCCRG00000012333) zgc:162941 (ENSCCRG00000005468) ids (ENSCCRG00000005510) AFF2 (ENSCCRG00000080866) fmr1 (ENSCCRG00000049036) ENSCCRG00000004677 ENSCCRG00000057627 ENSCCRG00000071988 SLITRK4 (ENSCCRG00000065823) ENSCCRG00000060022 ENSCCRG00000061421 ENSCCRG00000007056 rab33a (ENSCCRG00000049260) selenot2 (ENSCCRG00000007073) rnf4 (ENSCCRG00000010189) fgfrl1a (ENSCCRG00000057893) #22 ENSCCRG00000047182 spon2b (ENSCCRG00000080048) #24 ENSCCRG00000057291 ENSCCRG00000036277 rtn4rl2b (ENSCCRG00000036280) smtnl1 (ENSCCRG00000009326) phox2bb (ENSCCRG00000024900) ENSCCRG00000061990 slbp (ENSCCRG00000009478) #30 ENSCCRG00000014441 ENSCCRG00000070302 ENSCCRG00000078410 nkx1.2lb (ENSCCRG00000050353) #28 ENSCCRG00000079941 uvssa (ENSCCRG00000066129) Goldfish MODERN SPECIES 3227 ENSCARG00000063565 ENSCARG00000063557 SLITRK4 (ENSCARG00000063552) ENSCARG00000063548 ENSCARG00000063535 rab33a (ENSCARG00000063502) selenot2 (ENSCARG00000063469) rnf4 (ENSCARG00000063424) fgfrl1a (ENSCARG00000063363) #22 ENSCARG00000063329 ENSCARG00000063301 #24 WFS1 (ENSCARG00000063106) JAKMIP1 (ENSCARG00000062671) rtn4rl2b (ENSCARG00000062616) phox2bb (ENSCARG00000062590) Cyprininae ANCESTRAL SPECIES 385 ENSGT00940000153203.B.g #26 ENSGT00950000182987.c.b.b ENSGT00390000002866.b.m.a ENSGT00510000052596.a.f ENSGT00940000163031.b.b.a ENSGT00390000017614.f.a.a.a.a ENSGT00940000156803.k ENSGT00950000182974.a.a.a.a.q.a ENSGT00950000183189.a.b.b.d ENSGT00940000160971.c ENSGT00940000162571.c.a ENSGT00940000159942.b.c ENSGT00940000160863.b ENSGT00390000011725.c.a ENSGT00390000010318 ENSGT00940000156736.c.a.g.b #22 ENSGT00740000115581.f #23 ENSGT00940000160999.c.a.a.a ENSGT00940000160999.c.b ENSGT00940000159900.b #24 ENSGT00390000016928.d.f ENSGT00940000153713.B.c.u ENSGT00940000158505.n.a.f ENSGT00940000159958.d.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d.a ENSGT00950000183159.a.v.b Cyprininae_a ANCESTRAL SPECIES 530 ENSGT00940000162571.c.b ENSGT00940000159942.b.d ENSGT00940000160863.a.a ENSGT00390000011725.c.b ENSGT00390000010318.bc.a ENSGT00940000156736.c.a.g.b #22 ENSGT00940000160999.c.b ENSGT00940000160999.c.a.a.a ENSGT00940000159900.a #24 ENSGT00390000016928.d.e ENSGT00940000153713.B.c.v ENSGT00940000158505.n.a.e ENSGT00940000157622.b Common carp reference MODERN SPECIES 35 lygl2 (ENSCCRG00000034559) ids (ENSCCRG00000062369) ENSCCRG00000038125 AFF2 (ENSCCRG00000079468) ENSCCRG00000057327 fmr1 (ENSCCRG00000023048) ENSCCRG00000076548 ENSCCRG00000079067 SLITRK2 (ENSCCRG00000051881) ENSCCRG00000058986 SLITRK4 (ENSCCRG00000022737) ENSCCRG00000062378 ENSCCRG00000079806 rab33a (ENSCCRG00000072645) rnf4 (ENSCCRG00000076111) fgfrl1a (ENSCCRG00000077649) #22 ENSCCRG00000020172 spon2b (ENSCCRG00000020179) #24 ENSCCRG00000008359 ENSCCRG00000081190 rtn4rl2b (ENSCCRG00000020977) ENSCCRG00000060690 ENSCCRG00000075341 slc43a3b (ENSCCRG00000024913) smtnl1 (ENSCCRG00000024906) phox2bb (ENSCCRG00000067405) ENSCCRG00000063035 ENSCCRG00000058323 ENSCCRG00000076061 ENSCCRG00000016583 #30 ENSCCRG00000065114 Goldfish MODERN SPECIES 5 AFF2 (ENSCARG00000023943) fmr1 (ENSCARG00000022335) ENSCARG00000022298 SLITRK2 (ENSCARG00000022296) ENSCARG00000022293 SLITRK4 (ENSCARG00000022287) ENSCARG00000022284 ENSCARG00000022279 ENSCARG00000022273 ENSCARG00000022262 ENSCARG00000022230 ENSCARG00000022223 rab33a (ENSCARG00000022217) selenot2 (ENSCARG00000022212) rnf4 (ENSCARG00000022205) fgfrl1a (ENSCARG00000022187) #22 ENSCARG00000022178 #23 ENSCARG00000022173 spon2b (ENSCARG00000022157) #24 WFS1 (ENSCARG00000022149) JAKMIP1 (ENSCARG00000022082) rtn4rl2b (ENSCARG00000022047) slc43a3b (ENSCARG00000021991) smtnl1 (ENSCARG00000021978) phox2bb (ENSCARG00000021973) ENSCARG00000021955 ENSCARG00000021946 ENSCARG00000021937 ENSCARG00000021928 cysltr1 (ENSCARG00000021914) fam199x (ENSCARG00000021896) Cyprininae ANCESTRAL SPECIES 1183 ENSGT00970000197443 ENSGT00940000156736.c.a.h #22 ENSGT00940000160999.c.a.a.b Cyprininae_a ANCESTRAL SPECIES 869 ENSGT00970000197443 ENSGT00940000156736.c.a.h #22 ENSGT00940000160999.c.a.a.b Golden-line barbel MODERN SPECIES 146 ENSSGRG00000038038 ENSSGRG00000038044 ENSSGRG00000038048 rab33a (ENSSGRG00000038050) selenot2 (ENSSGRG00000038051) ENSSGRG00000038053 fgfrl1a (ENSSGRG00000038056) #22 ENSSGRG00000038060 spon2b (ENSSGRG00000038064) #24 WFS1 (ENSSGRG00000038066) ENSSGRG00000038068 JAKMIP1 (ENSSGRG00000038069) rtn4rl2b (ENSSGRG00000038070) phox2bb (ENSSGRG00000038074) cysltr1 (ENSSGRG00000038075) fam199x (ENSSGRG00000038077) ENSSGRG00000038079 p2ry10 (ENSSGRG00000038080) il1rapl2 (ENSSGRG00000038081) ENSSGRG00000038093 tmem129 (ENSSGRG00000039138) #32 atoh8 (ENSSGRG00000039140) Zebrafish MODERN SPECIES 5 ENSDARG00000007864 zgc:66433 (ENSDARG00000071697) lygl2 (ENSDARG00000099562) zgc:162941 (ENSDARG00000071701) lygl1 (ENSDARG00000056874) ids (ENSDARG00000071699) AFF2 (ENSDARG00000052242) fmr1 (ENSDARG00000037433) SLITRK2 (ENSDARG00000006636) ENSDARG00000101918 SLITRK4 (ENSDARG00000079781) ENSDARG00000076332 rab33a (ENSDARG00000057394) selenot2 (ENSDARG00000023220) rnf4 (ENSDARG00000090993) fgfrl1a (ENSDARG00000032617) #22 ENSDARG00000090319 #23 ENSDARG00000077880 spon2b (ENSDARG00000002732) #24 WFS1 (ENSDARG00000074617) JAKMIP1 (ENSDARG00000076090) rtn4rl2b (ENSDARG00000037495) slc43a3b (ENSDARG00000057949) smtnl1 (ENSDARG00000041257) phox2bb (ENSDARG00000091029) dicp2.2 (ENSDARG00000099539) dicp2.1 (ENSDARG00000035101) ENSDARG00000103774 tcirg1b (ENSDARG00000105142) sqstm1 (ENSDARG00000075014) mrnip (ENSDARG00000074071) Characiphysae ANCESTRAL SPECIES 21 ENSGT00510000052596.a ENSGT00940000163031.b.b ENSGT00390000017614.f.d.a ENSGT00390000017614.f.d.b.b ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162571.c.a ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00390000016928.d ENSGT00940000153713.B.c ENSGT00940000158505.n.a ENSGT00940000157622.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d ENSGT00950000183159.a.v.b.a ENSGT00940000155317.a.b ENSGT00940000160403 ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a Channel catfish MODERN SPECIES 27 ENSIPUG00000008629 Sv2b (ENSIPUG00000008646) ENSIPUG00000008722 ENSIPUG00000008777 klhl25 (ENSIPUG00000008829) ENSIPUG00000008844 ntrk3a (ENSIPUG00000008905) DET1 (ENSIPUG00000008962) map1lc3b (ENSIPUG00000009011) ENSIPUG00000009038 jph3 (ENSIPUG00000009045) Klhdc4 (ENSIPUG00000009054) ENSIPUG00000009121 selenot2 (ENSIPUG00000009138) Rnf4 (ENSIPUG00000009170) FGFRL1 (ENSIPUG00000009229) #22 ENSIPUG00000009263 #23 si:ch211-255i20.3 (ENSIPUG00000009306) spon2b (ENSIPUG00000009340) #24 Wfs1 (ENSIPUG00000009368) JAKMIP1 (ENSIPUG00000009398) rtn4rl2b (ENSIPUG00000009468) ENSIPUG00000009473 ENSIPUG00000009577 slc43a3b (ENSIPUG00000009499) smtnl1 (ENSIPUG00000009601) phox2bb (ENSIPUG00000009610) ENSIPUG00000009620 ENSIPUG00000009629 ENSIPUG00000009653 pcdh12 (ENSIPUG00000009669) Characiphysae_b ANCESTRAL SPECIES 16 ENSGT00510000052596.a ENSGT00940000163031.b.b ENSGT00390000017614.f.d.a ENSGT00390000017614.f.d.b.b ENSGT00940000156803 ENSGT00950000182974.a.a.a.a ENSGT00950000183189.a.b.b ENSGT00940000161248 ENSGT00940000160971 ENSGT00940000162571.c.a ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00390000016928.d ENSGT00940000153713.B.c ENSGT00940000158505.n.a ENSGT00940000157622.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d ENSGT00950000183159.a.v.b.a ENSGT00940000155317.a.b ENSGT00940000160403 ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a Electric eel MODERN SPECIES 57 rnf20 (ENSEEEG00000016430) ENSEEEG00000016989 zgc:66433 (ENSEEEG00000016990) zgc:162941 (ENSEEEG00000016991) ids (ENSEEEG00000016992) AFF2 (ENSEEEG00000016993) ENSEEEG00000016995 ENSEEEG00000016996 SLITRK2 (ENSEEEG00000017234) SLITRK4 (ENSEEEG00000017235) ENSEEEG00000017238 ENSEEEG00000017240 rab33a (ENSEEEG00000017241) selenot2 (ENSEEEG00000017242) rnf4 (ENSEEEG00000017243) fgfrl1a (ENSEEEG00000017244) #22 ENSEEEG00000017245 spon2b (ENSEEEG00000017247) #24 WFS1 (ENSEEEG00000017248) JAKMIP1 (ENSEEEG00000017251) ENSEEEG00000017254 rtn4rl2b (ENSEEEG00000017255) ENSEEEG00000017256 ENSEEEG00000017257 slc43a3b (ENSEEEG00000017260) smtnl1 (ENSEEEG00000017280) Characoidei ANCESTRAL SPECIES 47 ENSGT00940000159942.b ENSGT00940000160863 ENSGT01000000220275 ENSGT00390000011725.c ENSGT00390000010318 ENSGT00940000156736.c.a #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00390000016928.d ENSGT00940000153713.B.c ENSGT00940000158505.n.a ENSGT00940000157622.b ENSGT00940000154495.b.a.a.b ENSGT00940000159958.d ENSGT00950000183159.a.v.b.a ENSGT00940000155317.a.b ENSGT00940000160403 ENSGT00940000160738 ENSGT00950000183201.b.b.b.a ENSGT00950000182915.a.a.a Red-bellied piranha MODERN SPECIES 268 ENSPNAG00000022921 rab33a (ENSPNAG00000022929) ENSPNAG00000022938 selenot2 (ENSPNAG00000022999) rnf4 (ENSPNAG00000023046) fgfrl1a (ENSPNAG00000023061) #22 ENSPNAG00000023093 #23 ENSPNAG00000023115 spon2b (ENSPNAG00000023137) #24 WFS1 (ENSPNAG00000023188) JAKMIP1 (ENSPNAG00000023245) rtn4rl2b (ENSPNAG00000023259) ENSPNAG00000023268 slc43a3b (ENSPNAG00000003766) smtnl1 (ENSPNAG00000023302) phox2bb (ENSPNAG00000023315) ENSPNAG00000023342 ENSPNAG00000023357 PCDH12 (ENSPNAG00000023365) Mexicana tetra MODERN SPECIES 16 csnk1a1 (ENSAMXG00000002356) FBXO38 (ENSAMXG00000002358) hspa9 (ENSAMXG00000002363) ENSAMXG00000032792 ENSAMXG00000042910 ENSAMXG00000037375 tmem129 (ENSAMXG00000002375) #32 rell2 (ENSAMXG00000041853) HDAC3 (ENSAMXG00000042915) ENSAMXG00000037144 MYOT (ENSAMXG00000035312) ENSAMXG00000039535 ENSAMXG00000007836 ENSAMXG00000035761 il1rapl2 (ENSAMXG00000007823) fgfrl1a (ENSAMXG00000033222) #22 ENSAMXG00000031655 #23 ENSAMXG00000029316 spon2b (ENSAMXG00000042894) #24 WFS1 (ENSAMXG00000043676) ENSAMXG00000029800 JAKMIP1 (ENSAMXG00000007587) rtn4rl2b (ENSAMXG00000036104) ENSAMXG00000029059 ENSAMXG00000044034 slc43a3b (ENSAMXG00000007555) smtnl1 (ENSAMXG00000032862) phox2bb (ENSAMXG00000043803) ENSAMXG00000036476 ENSAMXG00000037418 ENSAMXG00000029657 Clupeocephala ANCESTRAL SPECIES 663 ENSGT01000000221578 ENSGT00940000157217 ENSGT00940000156736.c.b #22 Euteleosteomorpha ANCESTRAL SPECIES 26 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Protacanthopterygii ANCESTRAL SPECIES 92 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00390000010318.ic ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899.r ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091.o ENSGT00940000160091.p ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 119 ENSGT00940000159462.a.a.a ENSGT00550000074847.k.a ENSGT00390000006979.b.c ENSGT00940000155490.b.c ENSGT00940000154730.a ENSGT00390000011802.d ENSGT00390000014092.y.a ENSGT00390000017610.a ENSGT00390000001278.b.i.a ENSGT00940000156316.e ENSGT00940000158736.p ENSGT00950000182832.C.o ENSGT00940000159532.f ENSGT00390000007547.a ENSGT00940000157217.e.a ENSGT00940000156736.c.b.a #22 ENSGT00940000158858.q #31 ENSGT00390000002089.b.b ENSGT00940000157035.b ENSGT00940000155077.t ENSGT00940000156899.r ENSGT00940000155226.j ENSGT00940000154832.eb.e ENSGT00940000160091.o ENSGT00940000156487.ab ENSGT00940000165916.d ENSGT00390000002319.j ENSGT00940000153304.B.a ENSGT00940000158220.ab ENSGT00940000156774.n.b ENSGT00390000018691.c Salmoninae_a ANCESTRAL SPECIES 8 ENSGT00550000074847.k.a ENSGT00390000006979.b.c ENSGT00940000155490.b.c ENSGT00940000154730.a.b ENSGT00390000006240.k.b ENSGT00390000011802.d ENSGT00390000014092.y.a ENSGT00390000017610.a ENSGT00390000001278.b.i.a ENSGT00940000156316.e ENSGT00940000158736.p ENSGT00950000182832.C.o ENSGT00940000159532.f ENSGT00390000007547.a ENSGT00940000157217.e.a ENSGT00940000156736.c.b.a #22 ENSGT00940000158858.q #31 ENSGT00390000002089.b.b ENSGT00940000157035.b ENSGT00940000155077.t ENSGT00940000156899.r ENSGT00940000155226.j ENSGT00940000154832.eb.e ENSGT00940000160091.o ENSGT00940000156487.ab ENSGT00940000165916.d ENSGT00390000002319.j ENSGT00940000153304.B.a ENSGT01000000220883 ENSGT00940000158220.ab ENSGT00940000156774.n.b Oncorhynchus ANCESTRAL SPECIES 6 ENSGT00390000001830.c ENSGT00940000159462.a.a.a ENSGT00390000006979.b.c ENSGT00940000155490.b.c ENSGT00390000006240.k.b ENSGT00390000011802.d ENSGT00390000014092.y.a ENSGT00390000017610.a ENSGT00390000001278.b.i.a ENSGT00940000156316.e ENSGT00940000158736.p ENSGT00950000182832.C.o ENSGT00940000159532.f ENSGT00390000007547.a ENSGT00940000157217.e.a ENSGT00940000156736.c.b.a #22 ENSGT00940000158858.q #31 ENSGT01000000220226 ENSGT00390000002089.b.b ENSGT00940000157035.b ENSGT00940000155077.t ENSGT00940000156899.r ENSGT00940000154832.eb.e ENSGT00940000160091.o ENSGT00940000156487.ab ENSGT00940000165916.d ENSGT00390000002319.j ENSGT00940000153304.B.a ENSGT01000000220883 ENSGT00940000158220.ab ENSGT00940000156774.n.b Rainbow trout MODERN SPECIES 10 ENSOMYG00000042079 OTUB2 (ENSOMYG00000042067) asb2b (ENSOMYG00000042054) PRIMA1 (ENSOMYG00000042042) UNC79 (ENSOMYG00000041888) BTBD7 (ENSOMYG00000041849) UBR7 (ENSOMYG00000041844) ITPK1 (ENSOMYG00000041831) plk4 (ENSOMYG00000041771) ENSOMYG00000034757 ENSOMYG00000057513 chmp3 (ENSOMYG00000034183) ENSOMYG00000034158 RM35 (ENSOMYG00000034139) ENSOMYG00000034114 ENSOMYG00000034041 #22 ENSOMYG00000033976 #31 ENSOMYG00000033951 ENSOMYG00000033948 ENSOMYG00000022707 ENSOMYG00000033785 PCNX4 (ENSOMYG00000033608) PPM1A (ENSOMYG00000033544) SIX1 (ENSOMYG00000033510) six4a (ENSOMYG00000033505) mnat1 (ENSOMYG00000033496) trmt5 (ENSOMYG00000033483) ENSOMYG00000033467 prkcha (ENSOMYG00000033414) hif1a (ENSOMYG00000033186) snapc1b (ENSOMYG00000033072) Oncorhynchus_a ANCESTRAL SPECIES 10 ENSGT00390000001830.c ENSGT00940000159462.a.a.a ENSGT00390000006979.b.c ENSGT00940000155490.b.c ENSGT00390000006240.k.b ENSGT00390000011802.d ENSGT00390000014092.y.a ENSGT00390000017610.a ENSGT00390000001278.b.i.a ENSGT00940000156316.e ENSGT00940000158736.p ENSGT00950000182832.C.o ENSGT00940000159532.f ENSGT00390000007547.a ENSGT00940000157217.e.a ENSGT00940000156736.c.b.a #22 ENSGT00940000158858.q #31 ENSGT01000000220226 ENSGT00390000002089.b.b ENSGT00940000157035.b ENSGT00940000155077.t ENSGT00940000156899.r ENSGT00940000154832.eb.e ENSGT00940000160091.o ENSGT00940000156487.ab ENSGT00940000165916.d ENSGT00390000002319.j ENSGT00940000153304.B.a ENSGT01000000220883 ENSGT00940000158220.ab ENSGT00940000156774.n.b Coho salmon MODERN SPECIES 27 atxn3 (ENSOKIG00005002752) ENSOKIG00005002736 ENSOKIG00005002730 OTUB2 (ENSOKIG00005002722) asb2b (ENSOKIG00005002712) UNC79 (ENSOKIG00005002481) BTBD7 (ENSOKIG00005002418) UBR7 (ENSOKIG00005002397) ITPK1 (ENSOKIG00005002353) plk4 (ENSOKIG00005002131) HSPA4L (ENSOKIG00005001955) chmp3 (ENSOKIG00005001866) ENSOKIG00005001855 mrpl35 (ENSOKIG00005001846) ZFYVE28 (ENSOKIG00005001814) FGFRL1 (ENSOKIG00005001802) #22 tacc3 (ENSOKIG00005001785) #31 ENSOKIG00005001775 RD3L (ENSOKIG00005001766) TDRD9 (ENSOKIG00005044187) rtn1b (ENSOKIG00005044055) pcnx4 (ENSOKIG00005043873) ENSOKIG00005043837 PPM1A (ENSOKIG00005043804) six6a (ENSOKIG00005043787) SIX1 (ENSOKIG00005043767) six4a (ENSOKIG00005043759) mnat1 (ENSOKIG00005043741) trmt5 (ENSOKIG00005043725) ENSOKIG00005043701 prkcha (ENSOKIG00005042993) Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 2 atxn3 (ENSOTSG00005032054) ENSOTSG00005032052 OTUB2 (ENSOTSG00005032051) asb2b (ENSOTSG00005032050) PRIMA1 (ENSOTSG00005032049) UNC79 (ENSOTSG00005032022) BTBD7 (ENSOTSG00005032013) UBR7 (ENSOTSG00005032010) ITPK1 (ENSOTSG00005031974) plk4 (ENSOTSG00005031656) HSPA4L (ENSOTSG00005031634) chmp3 (ENSOTSG00005031632) ENSOTSG00005031630 mrpl35 (ENSOTSG00005031627) zfyve28 (ENSOTSG00005031621) FGFRL1 (ENSOTSG00005031613) #22 tacc3 (ENSOTSG00005031608) #31 ENSOTSG00005031606 ENSOTSG00005031605 tdrd9 (ENSOTSG00005031426) rtn1b (ENSOTSG00005031317) pcnx4 (ENSOTSG00005031203) ENSOTSG00005031197 ENSOTSG00005031195 mnat1 (ENSOTSG00005031193) trmt5 (ENSOTSG00005031188) prkcha (ENSOTSG00005030428) hif1ab (ENSOTSG00005028554) snapc1b (ENSOTSG00005028543) SYT16 (ENSOTSG00005028541) SGPP1 (ENSOTSG00005028538) Chinook salmon MODERN SPECIES 45 atxn3 (ENSOTSG00005026370) ENSOTSG00005026376 OTUB2 (ENSOTSG00005026377) asb2b (ENSOTSG00005026378) PRIMA1 (ENSOTSG00005026379) UNC79 (ENSOTSG00005026380) BTBD7 (ENSOTSG00005026428) UBR7 (ENSOTSG00005026429) ITPK1 (ENSOTSG00005026430) plk4 (ENSOTSG00005026439) HSPA4L (ENSOTSG00005026445) chmp3 (ENSOTSG00005026570) ENSOTSG00005026573 mrpl35 (ENSOTSG00005026574) zfyve28 (ENSOTSG00005026576) FGFRL1 (ENSOTSG00005026577) #22 tacc3 (ENSOTSG00005026578) #31 ENSOTSG00005026581 tdrd9 (ENSOTSG00005026582) ENSOTSG00005026632 rtn1b (ENSOTSG00005026633) pcnx4 (ENSOTSG00005026647) PPM1A (ENSOTSG00005026697) SIX1 (ENSOTSG00005026709) six4a (ENSOTSG00005026713) ENSOTSG00005026715 FRMPD3 (ENSOTSG00005026718) ENSOTSG00005026719 SLC25A53 (ENSOTSG00005026721) zgc:66447 (ENSOTSG00005026723) znf711 (ENSOTSG00005026725) Salmo ANCESTRAL SPECIES 8 ENSGT00550000074847.k.a ENSGT00390000006979.b.c ENSGT00940000155490.b.c ENSGT00940000154730.a.b ENSGT00390000006240.k.b ENSGT00390000011802.d ENSGT00390000014092.y.a ENSGT00390000017610.a ENSGT00390000001278.b.i.a ENSGT00940000156316.e ENSGT00940000158736.p ENSGT00950000182832.C.o ENSGT00940000159532.f ENSGT00390000007547.a ENSGT00940000157217.e.a ENSGT00940000156736.c.b.a #22 ENSGT00940000158858.q #31 ENSGT00390000002089.b.b ENSGT00940000157035.b ENSGT00940000156568.t ENSGT00940000156899.r ENSGT00940000155226.j ENSGT00940000154832.eb.e ENSGT00940000160091.o ENSGT00940000156487.ab ENSGT00940000165916.d ENSGT00390000002319.j ENSGT00940000153304.B.a ENSGT01000000220883 ENSGT00940000158220.ab ENSGT00940000156774.n.b River trout MODERN SPECIES 26 DDX24 (ENSSTUG00000014173) OTUB2 (ENSSTUG00000014145) asb2b (ENSSTUG00000014133) PRIMA1 (ENSSTUG00000014128) UNC79 (ENSSTUG00000013661) BTBD7 (ENSSTUG00000013589) UBR7 (ENSSTUG00000013561) ENSSTUG00000013553 ITPK1 (ENSSTUG00000013514) plk4 (ENSSTUG00000013384) HSPA4L (ENSSTUG00000048575) chmp3 (ENSSTUG00000048551) ENSSTUG00000048546 mrpl35 (ENSSTUG00000048539) zfyve28 (ENSSTUG00000048502) FGFRL1 (ENSSTUG00000048471) #22 tacc3 (ENSSTUG00000048437) #31 ENSSTUG00000048431 tdrd9 (ENSSTUG00000048216) rtn1a (ENSSTUG00000048088) ENSSTUG00000048078 pcnx4 (ENSSTUG00000047921) dhrs7 (ENSSTUG00000047894) PPM1A (ENSSTUG00000047881) SIX1 (ENSSTUG00000047872) six4a (ENSSTUG00000047853) mnat1 (ENSSTUG00000047823) trmt5 (ENSSTUG00000047818) ENSSTUG00000047803 prkcha (ENSSTUG00000047670) hif1ab (ENSSTUG00000047166) Huchen MODERN SPECIES 473 SERPINA10 (ENSHHUG00000051155) DDX24 (ENSHHUG00000051162) OTUB2 (ENSHHUG00000051255) asb2b (ENSHHUG00000051260) UNC79 (ENSHHUG00000051264) BTBD7 (ENSHHUG00000051296) UBR7 (ENSHHUG00000051299) ITPK1 (ENSHHUG00000051306) plk4 (ENSHHUG00000051321) HSPA4L (ENSHHUG00000051327) chmp3 (ENSHHUG00000051403) ENSHHUG00000051421 mrpl35 (ENSHHUG00000051430) ENSHHUG00000051434 zfyve28 (ENSHHUG00000051437) FGFRL1 (ENSHHUG00000051450) #22 tacc3 (ENSHHUG00000051454) #31 ENSHHUG00000051456 ENSHHUG00000051475 tdrd9 (ENSHHUG00000051476) ENSHHUG00000051527 pcnx4 (ENSHHUG00000051529) ENSHHUG00000051532 PPM1A (ENSHHUG00000051535) six6a (ENSHHUG00000051541) SIX1 (ENSHHUG00000051546) six4a (ENSHHUG00000051554) mnat1 (ENSHHUG00000051556) Salmoninae ANCESTRAL SPECIES 21 ENSGT00390000006979.b.d ENSGT00940000155490.b.d ENSGT00390000006240 ENSGT00390000011802.c ENSGT01080000258187 ENSGT00390000014092.y.b ENSGT00390000001278.b.i.b ENSGT00940000156316.f ENSGT00940000158736.o ENSGT00950000182832.C.p ENSGT00940000159532.e ENSGT00390000007547.b ENSGT00390000010318.ic ENSGT00500000045231 ENSGT00940000157217.e.b ENSGT00940000156736.c.b.b #22 ENSGT00940000158858.r #31 ENSGT00940000156463 ENSGT00390000002089.b.a ENSGT00940000157035.a ENSGT00940000155077.s ENSGT00940000158583 ENSGT00940000156899.q ENSGT00940000155226.i ENSGT00940000154832.eb.f ENSGT00940000160091.p ENSGT00940000156487.`b ENSGT00940000165916.c ENSGT00390000002319.i ENSGT00940000153304.B.b ENSGT00940000156982 Salmoninae_a ANCESTRAL SPECIES 36 ENSGT00940000155490.b.d ENSGT00940000154730.a.a ENSGT00390000006240.k.a ENSGT00390000011802.c ENSGT01080000258187 ENSGT00390000014092.y.b ENSGT00390000001278.b.i.b ENSGT00940000156316.f ENSGT00940000158736.o ENSGT00950000182832.C.p ENSGT00940000159532.e ENSGT00390000007547.b ENSGT00390000010318.ic ENSGT00500000045231 ENSGT00940000157217.e.b ENSGT00940000156736.c.b.b #22 ENSGT00940000158858.r #31 ENSGT00940000156463 ENSGT00390000002089.b.a ENSGT00940000157035.a ENSGT00940000155077.s ENSGT00940000158583 ENSGT00940000156899.q ENSGT00940000155226.i ENSGT00940000154832.eb.f ENSGT00940000160091.p ENSGT00940000156487.`b ENSGT00940000165916.c ENSGT00390000002319.i ENSGT00940000153304.B.b ENSGT00940000156982 Salmo ANCESTRAL SPECIES 11 ENSGT00390000006979.b.d ENSGT00940000154730.a.a ENSGT00390000006240.k.a ENSGT00390000011802.c ENSGT01080000258187 ENSGT00390000014092.y.b ENSGT00390000001278.b.i.b ENSGT00940000156316.f ENSGT00940000158736.o ENSGT00950000182832.C.p ENSGT00940000159532.e ENSGT00390000007547.b ENSGT00940000166266 ENSGT00500000045231 ENSGT00940000157217.e.b ENSGT00940000156736.c.b.b #22 ENSGT00940000158858.r #31 ENSGT00940000156463 ENSGT00390000002089.b.a ENSGT00940000157035.a ENSGT00940000155077.s ENSGT00940000158583 ENSGT00940000156899.q ENSGT00940000155226.i ENSGT00940000154832.eb.f ENSGT00940000160091.p ENSGT00940000156487.`b ENSGT00940000165916.c ENSGT00390000002319.i ENSGT00940000153304.B.b ENSGT00940000156982 Atlantic salmon MODERN SPECIES 28 ENSSSAG00000085111 FAM181A (ENSSSAG00000090652) PRIMA1 (ENSSSAG00000088614) UNC79 (ENSSSAG00000009425) ENSSSAG00000013511 BTBD7 (ENSSSAG00000013710) ENSSSAG00000014105 plk4 (ENSSSAG00000091378) ENSSSAG00000015877 CHMP3 (ENSSSAG00000015546) ENSSSAG00000087645 mrpl35 (ENSSSAG00000015576) ENSSSAG00000015634 ENSSSAG00000015649 ENSSSAG00000015731 ENSSSAG00000017225 #22 ENSSSAG00000063405 ENSSSAG00000087372 ENSSSAG00000017292 #31 ENSSSAG00000018337 ENSSSAG00000039191 ENSSSAG00000121283 rtn1 (ENSSSAG00000041513) ENSSSAG00000039511 LRRC9 (ENSSSAG00000041815) dhrs7 (ENSSSAG00000042631) PPM1A (ENSSSAG00000042663) six6a (ENSSSAG00000097614) SIX1 (ENSSSAG00000042698) mnat1 (ENSSSAG00000042722) six4a (ENSSSAG00000042716) River trout MODERN SPECIES 17 ENSSTUG00000005066 DDX24 (ENSSTUG00000005047) OTUB2 (ENSSTUG00000004955) PRIMA1 (ENSSTUG00000004936) UNC79 (ENSSTUG00000004328) BTBD7 (ENSSTUG00000004268) ENSSTUG00000004251 plk4 (ENSSTUG00000004138) chmp3 (ENSSTUG00000003640) ENSSTUG00000003425 mrpl35 (ENSSTUG00000047554) HSPA4L (ENSSTUG00000046193) ENSSTUG00000046093 ENSSTUG00000045968 zfyve28 (ENSSTUG00000045898) FGFRL1 (ENSSTUG00000045881) #22 tacc3 (ENSSTUG00000045859) #31 KIF15 (ENSSTUG00000045455) ENSSTUG00000045425 tdrd9 (ENSSTUG00000045033) RTN1 (ENSSTUG00000044944) LRRC9 (ENSSTUG00000044450) ENSSTUG00000044415 dhrs7 (ENSSTUG00000044393) PPM1A (ENSSTUG00000044377) six6a (ENSSTUG00000044367) SIX1 (ENSSTUG00000044355) six4a (ENSSTUG00000044351) mnat1 (ENSSTUG00000044340) trmt5 (ENSSTUG00000044247) slc38a6 (ENSSTUG00000044238) Oncorhynchus ANCESTRAL SPECIES 36 ENSGT00940000159462.a.a.b ENSGT00550000074847.k.b ENSGT00390000006979.b.d ENSGT00940000155490.b.d ENSGT00390000006240.k.a ENSGT00390000011802.c ENSGT00390000014092.y.b ENSGT00390000001278.b.i.b ENSGT00940000156316.f ENSGT00940000158736.o ENSGT00950000182832.C.p ENSGT00940000159532.e ENSGT00390000010318.ic ENSGT00500000045231 ENSGT00940000157217.e.b ENSGT00940000156736.c.b.b #22 ENSGT00940000158858.r #31 ENSGT00940000156463 ENSGT00390000002089.b.a ENSGT00940000157035.a ENSGT00940000155077.s ENSGT00940000158583 ENSGT00940000156899.q ENSGT00940000155226.i ENSGT00940000154832.eb.f ENSGT00940000160091.p ENSGT00940000156487.`b ENSGT00940000165916.c ENSGT00390000002319.i ENSGT00940000153304.B.b ENSGT00940000156982 Rainbow trout MODERN SPECIES 17 DDX24 (ENSOMYG00000020939) OTUB2 (ENSOMYG00000020951) FAM181A (ENSOMYG00000020959) PRIMA1 (ENSOMYG00000020962) UNC79 (ENSOMYG00000021045) BTBD7 (ENSOMYG00000021461) ENSOMYG00000017640 ENSOMYG00000021498 plk4 (ENSOMYG00000021530) ENSOMYG00000021724 chmp3 (ENSOMYG00000022250) ENSOMYG00000022290 RNF4 (ENSOMYG00000022300) ENSOMYG00000022326 ZFYVE28 (ENSOMYG00000022379) ENSOMYG00000022414 #22 ENSOMYG00000022425 #31 ENSOMYG00000022521 ENSOMYG00000022687 RTN1 (ENSOMYG00000022766) LRRC9 (ENSOMYG00000022976) ENSOMYG00000056902 ENSOMYG00000058449 dhrs7 (ENSOMYG00000023490) PPM1A (ENSOMYG00000023512) ENSOMYG00000059642 six6a (ENSOMYG00000023529) SIX1 (ENSOMYG00000023542) six4a (ENSOMYG00000023560) mnat1 (ENSOMYG00000023606) ENSOMYG00000074238 Oncorhynchus_a ANCESTRAL SPECIES 33 ENSGT00940000159462.a.a.b ENSGT00550000074847.k.b ENSGT00390000006979.b.d ENSGT00940000155490.b.d ENSGT00390000006240.k.a ENSGT00390000011802.c ENSGT00390000014092.y.b ENSGT00390000001278.b.i.b ENSGT00940000156316.f ENSGT00940000158736.o ENSGT00950000182832.C.p ENSGT00940000159532.e ENSGT00390000010318.ic ENSGT00500000045231 ENSGT00940000157217.e.b ENSGT00940000156736.c.b.b #22 ENSGT00940000158858.r #31 ENSGT00940000156463 ENSGT00390000002089.b.a ENSGT00940000157035.a ENSGT00940000155077.s ENSGT00940000158583 ENSGT00940000155226.i ENSGT00940000154832.eb.f ENSGT00940000160091.p ENSGT00940000156487.`b ENSGT00940000165916.c ENSGT00390000002319.i ENSGT00940000153304.B.b ENSGT00940000156982 ENSGT00940000158220.bb Chinook salmon MODERN SPECIES 32 DDX24 (ENSOTSG00005006256) OTUB2 (ENSOTSG00005006264) ENSOTSG00005006330 PRIMA1 (ENSOTSG00005006333) UNC79 (ENSOTSG00005006353) BTBD7 (ENSOTSG00005006420) BTBD7 (ENSOTSG00005006418) ENSOTSG00005006421 plk4 (ENSOTSG00005006433) HSPA4L (ENSOTSG00005006453) chmp3 (ENSOTSG00005007490) ENSOTSG00005007494 RNF4 (ENSOTSG00005007498) ENSOTSG00005007500 zfyve28 (ENSOTSG00005007508) FGFRL1 (ENSOTSG00005007511) #22 ENSOTSG00005007513 #31 KIF15 (ENSOTSG00005007517) ENSOTSG00005007519 tdrd9 (ENSOTSG00005007522) RTN1 (ENSOTSG00005007524) LRRC9 (ENSOTSG00005007534) dhrs7 (ENSOTSG00005007629) PPM1A (ENSOTSG00005007632) mnat1 (ENSOTSG00005007633) SIX1 (ENSOTSG00005007634) six4a (ENSOTSG00005007635) ENSOTSG00005007638 slc38a6 (ENSOTSG00005007649) prkcha (ENSOTSG00005007650) hif1ab (ENSOTSG00005007690) Coho salmon MODERN SPECIES 5 SERPINA10 (ENSOKIG00005006357) DDX24 (ENSOKIG00005006340) OTUB2 (ENSOKIG00005006301) ENSOKIG00005006282 PRIMA1 (ENSOKIG00005006275) UNC79 (ENSOKIG00005005787) BTBD7 (ENSOKIG00005005698) ENSOKIG00005005653 plk4 (ENSOKIG00005005624) chmp3 (ENSOKIG00005005593) ENSOKIG00005005560 HSPA4L (ENSOKIG00005004904) ENSOKIG00005004824 ENSOKIG00005004820 zfyve28 (ENSOKIG00005004800) FGFRL1 (ENSOKIG00005004743) #22 ENSOKIG00005004625 #31 KIF15 (ENSOKIG00005004297) ENSOKIG00005025826 tdrd9 (ENSOKIG00005025783) RTN1 (ENSOKIG00005025615) LRRC9 (ENSOKIG00005024856) dhrs7 (ENSOKIG00005024393) PPM1A (ENSOKIG00005024370) six6a (ENSOKIG00005024357) SIX1 (ENSOKIG00005024347) six4a (ENSOKIG00005024342) mnat1 (ENSOKIG00005024329) ENSOKIG00005024305 slc38a6 (ENSOKIG00005024153) ENSOKIG00005024138 Huchen MODERN SPECIES 156 DDX24 (ENSHHUG00000050758) OTUB2 (ENSHHUG00000050752) asb2b (ENSHHUG00000050745) PRIMA1 (ENSHHUG00000050740) UNC79 (ENSHHUG00000050612) BTBD7 (ENSHHUG00000050608) ENSHHUG00000050586 plk4 (ENSHHUG00000050563) HSPA4L (ENSHHUG00000050022) chmp3 (ENSHHUG00000049984) ENSHHUG00000049980 mrpl35 (ENSHHUG00000049978) RNF4 (ENSHHUG00000049975) ENSHHUG00000049964 zfyve28 (ENSHHUG00000049948) FGFRL1 (ENSHHUG00000049935) #22 tacc3 (ENSHHUG00000049906) #31 ENSHHUG00000049903 #31 KIF15 (ENSHHUG00000049832) ENSHHUG00000049829 tdrd9 (ENSHHUG00000049809) RTN1 (ENSHHUG00000049795) LRRC9 (ENSHHUG00000049593) dhrs7 (ENSHHUG00000049564) PPM1A (ENSHHUG00000049560) six6a (ENSHHUG00000049555) SIX1 (ENSHHUG00000049531) six4a (ENSHHUG00000049528) mnat1 (ENSHHUG00000049515) trmt5 (ENSHHUG00000049506) slc38a6 (ENSHHUG00000049471) Northern pike MODERN SPECIES 14 asb2b (ENSELUG00000009596) PRIMA1 (ENSELUG00000009607) UNC79 (ENSELUG00000009689) ENSELUG00000009714 BTBD7 (ENSELUG00000009747) UBR7 (ENSELUG00000001293) ITPK1 (ENSELUG00000000358) plk4 (ENSELUG00000009850) HSPA4L (ENSELUG00000009927) chmp3 (ENSELUG00000009959) ENSELUG00000009986 mrpl35 (ENSELUG00000010029) ENSELUG00000010064 ENSELUG00000010122 zfyve28 (ENSELUG00000010215) FGFRL1 (ENSELUG00000010265) #22 tacc3 (ENSELUG00000010391) #31 ENSELUG00000010519 tdrd9 (ENSELUG00000010798) ENSELUG00000010554 rtn1b (ENSELUG00000010907) LRRC9 (ENSELUG00000011049) pcnx4 (ENSELUG00000011102) dhrs7 (ENSELUG00000011143) PPM1A (ENSELUG00000011219) six6a (ENSELUG00000011237) six1b (ENSELUG00000011244) six4a (ENSELUG00000011260) mnat1 (ENSELUG00000011286) trmt5 (ENSELUG00000011314) slc38a6 (ENSELUG00000011400) Acanthomorphata ANCESTRAL SPECIES 7 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Euacanthomorphacea ANCESTRAL SPECIES 11 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Percomorphaceae ANCESTRAL SPECIES 13 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Tiger tail seahorse MODERN SPECIES 176 PRIMA1 (ENSHCOG00000019992) UNC79 (ENSHCOG00000020116) ENSHCOG00000020125 btbd7 (ENSHCOG00000000619) UBR7 (ENSHCOG00000020155) ITPK1 (ENSHCOG00000020182) plk4 (ENSHCOG00000020214) HSPA4L (ENSHCOG00000020261) chmp3 (ENSHCOG00000020284) ENSHCOG00000020355 mrpl35 (ENSHCOG00000020369) ENSHCOG00000000549 ENSHCOG00000020399 ENSHCOG00000020433 zfyve28 (ENSHCOG00000020469) FGFRL1 (ENSHCOG00000020680) #22 ENSHCOG00000020823 #31 ENSHCOG00000020849 ENSHCOG00000020860 ENSHCOG00000020874 tdrd9 (ENSHCOG00000020886) rtn1b (ENSHCOG00000020903) LRRC9 (ENSHCOG00000020989) pcnx4 (ENSHCOG00000021000) dhrs7 (ENSHCOG00000021010) ppm1aa (ENSHCOG00000021042) six6a (ENSHCOG00000021060) six1b (ENSHCOG00000021069) six4a (ENSHCOG00000021077) mnat1 (ENSHCOG00000002831) Percomorphaceae_B ANCESTRAL SPECIES 11 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Percomorphaceae_C ANCESTRAL SPECIES 12 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Eupercaria ANCESTRAL SPECIES 9 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Tetraodontidae ANCESTRAL SPECIES 3 ENSGT00390000006979.b ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00940000174626 ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00390000014303 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B Fugu MODERN SPECIES 11 SERPINA10 (ENSTRUG00000006038) DDX24 (ENSTRUG00000006101) otub2 (ENSTRUG00000027452) asb2b (ENSTRUG00000006377) PRIMA1 (ENSTRUG00000025208) btbd7 (ENSTRUG00000006932) UBR7 (ENSTRUG00000006987) ITPK1 (ENSTRUG00000007327) plk4 (ENSTRUG00000007503) HSPA4L (ENSTRUG00000020783) chmp3 (ENSTRUG00000008251) ENSTRUG00000019782 mrpl35 (ENSTRUG00000020854) ENSTRUG00000020531 zfyve28 (ENSTRUG00000008405) FGFRL1 (ENSTRUG00000008594) #22 ENSTRUG00000008982 ENSTRUG00000022921 tdrd9 (ENSTRUG00000009586) rtn1 (ENSTRUG00000009983) pcnx4 (ENSTRUG00000010325) dhrs7 (ENSTRUG00000010385) ppm1aa (ENSTRUG00000010499) six6a (ENSTRUG00000010571) ENSTRUG00000027854 six1b (ENSTRUG00000010669) six4a (ENSTRUG00000010704) mnat1 (ENSTRUG00000010746) trmt5 (ENSTRUG00000010888) slc38a6 (ENSTRUG00000010934) prkcha (ENSTRUG00000011406) Tetraodon MODERN SPECIES 1 DDX24 (ENSTNIG00000017368) OTUB2 (ENSTNIG00000001469) asb2b (ENSTNIG00000017367) FAM181A (ENSTNIG00000017366) PRIMA1 (ENSTNIG00000001223) UNC79 (ENSTNIG00000017365) btbd7 (ENSTNIG00000017364) UBR7 (ENSTNIG00000017363) ITPK1 (ENSTNIG00000017362) plk4 (ENSTNIG00000017361) HSPA4L (ENSTNIG00000017360) ENSTNIG00000017359 ENSTNIG00000001979 mrpl35 (ENSTNIG00000017358) zfyve28 (ENSTNIG00000017357) FGFRL1 (ENSTNIG00000017356) #22 tacc3 (ENSTNIG00000017355) #31 ENSTNIG00000017354 tdrd9 (ENSTNIG00000017353) rtn1b (ENSTNIG00000017352) ENSTNIG00000001481 LRRC9 (ENSTNIG00000017351) pcnx4 (ENSTNIG00000017350) dhrs7 (ENSTNIG00000017349) ppm1aa (ENSTNIG00000017348) six6a (ENSTNIG00000017347) ino80c (ENSTNIG00000017346) six1b (ENSTNIG00000017345) six4a (ENSTNIG00000017344) mnat1 (ENSTNIG00000017343) trmt5 (ENSTNIG00000017342) Eupecaria_A ANCESTRAL SPECIES 10 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Ballan wrasse MODERN SPECIES 234 asb2b (ENSLBEG00000020956) PRIMA1 (ENSLBEG00000020984) UNC79 (ENSLBEG00000021033) ENSLBEG00000021145 btbd7 (ENSLBEG00000021202) UBR7 (ENSLBEG00000021306) ITPK1 (ENSLBEG00000021340) plk4 (ENSLBEG00000021389) HSPA4L (ENSLBEG00000021430) chmp3 (ENSLBEG00000021504) ENSLBEG00000021534 mrpl35 (ENSLBEG00000021581) ENSLBEG00000021597 ENSLBEG00000021628 zfyve28 (ENSLBEG00000021679) FGFRL1 (ENSLBEG00000021775) #22 ENSLBEG00000021811 #31 ENSLBEG00000021853 tdrd9 (ENSLBEG00000022006) ENSLBEG00000022289 rtn1b (ENSLBEG00000022417) LRRC9 (ENSLBEG00000022805) pcnx4 (ENSLBEG00000022965) dhrs7 (ENSLBEG00000023004) ppm1aa (ENSLBEG00000023052) six6a (ENSLBEG00000023084) six1b (ENSLBEG00000023099) six4a (ENSLBEG00000023113) mnat1 (ENSLBEG00000023140) trmt5 (ENSLBEG00000023240) slc38a6 (ENSLBEG00000023288) Eupecaria_B ANCESTRAL SPECIES 11 ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Eupecaria_C ANCESTRAL SPECIES 8 ENSGT00390000006979.b ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Gilthead seabream MODERN SPECIES 7 DDX24 (ENSSAUG00010014365) OTUB2 (ENSSAUG00010014367) asb2b (ENSSAUG00010014369) PRIMA1 (ENSSAUG00010014371) UNC79 (ENSSAUG00010014396) btbd7 (ENSSAUG00010014718) UBR7 (ENSSAUG00010014720) ITPK1 (ENSSAUG00010014724) plk4 (ENSSAUG00010014757) ENSSAUG00010015247 HSPA4L (ENSSAUG00010015254) chmp3 (ENSSAUG00010015322) ENSSAUG00010015324 mrpl35 (ENSSAUG00010015326) zfyve28 (ENSSAUG00010015330) FGFRL1 (ENSSAUG00010015331) #22 ENSSAUG00010015333 #31 ENSSAUG00010015348 RD3L (ENSSAUG00010015625) rtn1b (ENSSAUG00010015627) LRRC9 (ENSSAUG00010015676) pcnx4 (ENSSAUG00010015710) dhrs7 (ENSSAUG00010015752) ppm1aa (ENSSAUG00010015753) six6a (ENSSAUG00010015755) six1b (ENSSAUG00010015756) six4a (ENSSAUG00010015758) mnat1 (ENSSAUG00010015759) trmt5 (ENSSAUG00010015765) slc38a6 (ENSSAUG00010015851) prkcha (ENSSAUG00010016286) Eupercaria_incertae_sedis ANCESTRAL SPECIES 16 ENSGT00390000006979.b ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 European seabass MODERN SPECIES 2 OTUB2 (ENSDLAG00005009868) asb2b (ENSDLAG00005009877) FAM181A (ENSDLAG00005033413) PRIMA1 (ENSDLAG00005035073) UNC79 (ENSDLAG00005009913) BTBD7 (ENSDLAG00005010640) UBR7 (ENSDLAG00005030073) ITPK1 (ENSDLAG00005010666) plk4 (ENSDLAG00005010731) ENSDLAG00005010972 chmp3 (ENSDLAG00005031975) ENSDLAG00005030128 mrpl35 (ENSDLAG00005013173) ENSDLAG00005013182 ENSDLAG00005013222 ENSDLAG00005013324 #22 ENSDLAG00005013342 #31 ENSDLAG00005013433 ENSDLAG00005027379 tdrd9 (ENSDLAG00005014536) RTN1 (ENSDLAG00005028113) LRRC9 (ENSDLAG00005014880) pcnx4 (ENSDLAG00005014965) dhrs7 (ENSDLAG00005015036) ppm1aa (ENSDLAG00005015047) six6a (ENSDLAG00005029949) six1a (ENSDLAG00005030873) six4a (ENSDLAG00005028032) mnat1 (ENSDLAG00005015110) trmt5 (ENSDLAG00005015164) slc38a6 (ENSDLAG00005015183) Large yellow croaker MODERN SPECIES 495 DDX24 (ENSLCRG00005015183) OTUB2 (ENSLCRG00005015181) asb2b (ENSLCRG00005015179) PRIMA1 (ENSLCRG00005015176) UNC79 (ENSLCRG00005015106) btbd7 (ENSLCRG00005015100) UBR7 (ENSLCRG00005015098) ITPK1 (ENSLCRG00005015097) plk4 (ENSLCRG00005015093) HSPA4L (ENSLCRG00005013738) chmp3 (ENSLCRG00005013728) ENSLCRG00005013727 mrpl35 (ENSLCRG00005013726) ENSLCRG00005013725 zfyve28 (ENSLCRG00005013716) FGFRL1 (ENSLCRG00005013712) #22 ENSLCRG00005013711 #31 ENSLCRG00005013647 ENSLCRG00005013640 tdrd9 (ENSLCRG00005013598) rtn1b (ENSLCRG00005013582) LRRC9 (ENSLCRG00005013475) pcnx4 (ENSLCRG00005013469) dhrs7 (ENSLCRG00005013466) ppm1aa (ENSLCRG00005013460) six6a (ENSLCRG00005013457) six1b (ENSLCRG00005013455) six4a (ENSLCRG00005013454) mnat1 (ENSLCRG00005013452) trmt5 (ENSLCRG00005017732) slc38a6 (ENSLCRG00005017723) Perciformes ANCESTRAL SPECIES 12 ENSGT00730000112193 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Perciformes_a ANCESTRAL SPECIES 10 ENSGT00730000112193 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Channel bull blenny MODERN SPECIES 14 OTUB2 (ENSCGOG00000011262) asb2b (ENSCGOG00000011256) PRIMA1 (ENSCGOG00000011251) UNC79 (ENSCGOG00000011022) ENSCGOG00000011018 btbd7 (ENSCGOG00000010988) UBR7 (ENSCGOG00000010985) ITPK1 (ENSCGOG00000010947) plk4 (ENSCGOG00000010757) HSPA4L (ENSCGOG00000009522) chmp3 (ENSCGOG00000009413) ENSCGOG00000009395 mrpl35 (ENSCGOG00000009392) ENSCGOG00000009384 zfyve28 (ENSCGOG00000009142) FGFRL1 (ENSCGOG00000009124) #22 ENSCGOG00000009120 #31 ENSCGOG00000009117 #31 ENSCGOG00000009052 ENSCGOG00000009044 tdrd9 (ENSCGOG00000008948) rtn1b (ENSCGOG00000008764) LRRC9 (ENSCGOG00000008732) pcnx4 (ENSCGOG00000008695) dhrs7 (ENSCGOG00000008692) ppm1aa (ENSCGOG00000008672) six6a (ENSCGOG00000008664) six1b (ENSCGOG00000008660) six4a (ENSCGOG00000008657) mnat1 (ENSCGOG00000008652) trmt5 (ENSCGOG00000008648) Pike perch MODERN SPECIES 5 ENSSLUG00000013956 asb2b (ENSSLUG00000013960) PRIMA1 (ENSSLUG00000013969) UNC79 (ENSSLUG00000014028) ENSSLUG00000014706 btbd7 (ENSSLUG00000014714) UBR7 (ENSSLUG00000014725) ITPK1 (ENSSLUG00000014737) plk4 (ENSSLUG00000014760) HSPA4L (ENSSLUG00000014883) chmp3 (ENSSLUG00000016426) ENSSLUG00000016444 mrpl35 (ENSSLUG00000016459) ENSSLUG00000016468 zfyve28 (ENSSLUG00000016493) FGFRL1 (ENSSLUG00000016574) #22 tacc3 (ENSSLUG00000016588) #31 ENSSLUG00000016643 tdrd9 (ENSSLUG00000003777) ENSSLUG00000004110 rtn1b (ENSSLUG00000004149) LRRC9 (ENSSLUG00000004274) pcnx4 (ENSSLUG00000004296) dhrs7 (ENSSLUG00000004361) ppm1aa (ENSSLUG00000004373) six6a (ENSSLUG00000004383) six1b (ENSSLUG00000004390) six4a (ENSSLUG00000004396) mnat1 (ENSSLUG00000004405) trmt5 (ENSSLUG00000004424) slc38a6 (ENSSLUG00000004465) Cottioidei ANCESTRAL SPECIES 8 ENSGT00940000154730.a ENSGT00940000171116 ENSGT00390000006240 ENSGT00390000011802 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Lumpfish MODERN SPECIES 14 OTUB2 (ENSCLMG00005012399) asb2b (ENSCLMG00005012400) PRIMA1 (ENSCLMG00005012403) UNC79 (ENSCLMG00005012409) btbd7 (ENSCLMG00005012412) UBR7 (ENSCLMG00005012469) ITPK1 (ENSCLMG00005012471) plk4 (ENSCLMG00005012473) ENSCLMG00005012476 HSPA4L (ENSCLMG00005012488) chmp3 (ENSCLMG00005012715) ENSCLMG00005012726 mrpl35 (ENSCLMG00005012728) ENSCLMG00005012730 zfyve28 (ENSCLMG00005012732) FGFRL1 (ENSCLMG00005012764) #22 ENSCLMG00005012794 #31 ENSCLMG00005012795 ENSCLMG00005012802 tdrd9 (ENSCLMG00005012811) rtn1b (ENSCLMG00005012819) LRRC9 (ENSCLMG00005012907) ENSCLMG00005012908 pcnx4 (ENSCLMG00005012909) dhrs7 (ENSCLMG00005012910) ppm1aa (ENSCLMG00005012912) six6a (ENSCLMG00005012913) six1b (ENSCLMG00005012914) six4a (ENSCLMG00005012916) mnat1 (ENSCLMG00005012917) trmt5 (ENSCLMG00005012918) Stickleback MODERN SPECIES 15 FAM181A (ENSGACG00000008113) ENSGACG00000008116 UNC79 (ENSGACG00000008119) ENSGACG00000008137 UNC79 (ENSGACG00000008141) btbd7 (ENSGACG00000008151) UBR7 (ENSGACG00000008158) ITPK1 (ENSGACG00000008184) plk4 (ENSGACG00000008202) HSPA4L (ENSGACG00000008210) chmp3 (ENSGACG00000008219) ENSGACG00000008260 mrpl35 (ENSGACG00000008269) ENSGACG00000008272 zfyve28 (ENSGACG00000008275) FGFRL1 (ENSGACG00000008282) #22 tacc3 (ENSGACG00000008294) #31 ENSGACG00000008300 tdrd9 (ENSGACG00000008322) ENSGACG00000008360 LRRC9 (ENSGACG00000008383) pcnx4 (ENSGACG00000008396) dhrs7 (ENSGACG00000008408) ppm1aa (ENSGACG00000008424) six6a (ENSGACG00000008430) six1b (ENSGACG00000008432) six4a (ENSGACG00000008440) mnat1 (ENSGACG00000008443) trmt5 (ENSGACG00000008470) slc38a6 (ENSGACG00000008488) prkcha (ENSGACG00000008506) Percomorphaceae_D ANCESTRAL SPECIES 10 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Carangaria ANCESTRAL SPECIES 10 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Carangaria_A ANCESTRAL SPECIES 4 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Seriola ANCESTRAL SPECIES 3 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Greater amberjack MODERN SPECIES 62 OTUB2 (ENSSDUG00000001696) asb2b (ENSSDUG00000001615) PRIMA1 (ENSSDUG00000001599) UNC79 (ENSSDUG00000001521) btbd7 (ENSSDUG00000001447) UBR7 (ENSSDUG00000001420) ITPK1 (ENSSDUG00000001344) plk4 (ENSSDUG00000001289) HSPA4L (ENSSDUG00000001219) chmp3 (ENSSDUG00000001197) ENSSDUG00000001135 mrpl35 (ENSSDUG00000001120) ENSSDUG00000001089 ENSSDUG00000001072 zfyve28 (ENSSDUG00000001014) FGFRL1 (ENSSDUG00000000961) #22 tacc3 (ENSSDUG00000000885) #31 ENSSDUG00000000710 ENSSDUG00000000687 tdrd9 (ENSSDUG00000000483) ENSSDUG00000000446 ENSSDUG00000000278 LRRC9 (ENSSDUG00000000105) pcnx4 (ENSSDUG00000019869) dhrs7 (ENSSDUG00000019842) ppm1aa (ENSSDUG00000019832) six6a (ENSSDUG00000019822) six1b (ENSSDUG00000019814) six4a (ENSSDUG00000019800) ENSSDUG00000019588 mnat1 (ENSSDUG00000019550) Yellowtail amberjack MODERN SPECIES 2902 ITPK1 (ENSSLDG00000006913) plk4 (ENSSLDG00000006840) HSPA4L (ENSSLDG00000006752) chmp3 (ENSSLDG00000006592) REEP1 (ENSSLDG00000006545) mrpl35 (ENSSLDG00000006561) ENSSLDG00000006502 ENSSLDG00000006354 zfyve28 (ENSSLDG00000006229) FGFRL1 (ENSSLDG00000006183) #22 tacc3 (ENSSLDG00000006150) #31 ENSSLDG00000005991 Barramundi perch MODERN SPECIES 110 DDX24 (ENSLCAG00010022194) OTUB2 (ENSLCAG00010022235) ENSLCAG00010022239 PRIMA1 (ENSLCAG00010022242) UNC79 (ENSLCAG00010022264) ENSLCAG00010022309 btbd7 (ENSLCAG00010022313) UBR7 (ENSLCAG00010022317) ITPK1 (ENSLCAG00010022324) plk4 (ENSLCAG00010022335) HSPA4L (ENSLCAG00010022608) chmp3 (ENSLCAG00010023660) ENSLCAG00010023670 mrpl35 (ENSLCAG00010023674) ENSLCAG00010023686 FGFRL1 (ENSLCAG00010023690) #22 tacc3 (ENSLCAG00010023699) #31 ENSLCAG00010023711 tdrd9 (ENSLCAG00010023733) ENSLCAG00010023755 rtn1b (ENSLCAG00010023760) LRRC9 (ENSLCAG00010023768) dhrs7 (ENSLCAG00010023780) PPM1A (ENSLCAG00010023783) six6a (ENSLCAG00010023786) six1b (ENSLCAG00010023789) six4a (ENSLCAG00010023791) mnat1 (ENSLCAG00010023795) trmt5 (ENSLCAG00010023804) slc38a6 (ENSLCAG00010023806) prkcha (ENSLCAG00010023818) Pleuronectoidei ANCESTRAL SPECIES 5 ENSGT00390000006979.b ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000156568 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Turbot MODERN SPECIES 8 SERPINA10 (ENSSMAG00000002821) DDX24 (ENSSMAG00000002784) OTUB2 (ENSSMAG00000002793) asb2b (ENSSMAG00000002752) PRIMA1 (ENSSMAG00000002747) BTBD7 (ENSSMAG00000002707) UBR7 (ENSSMAG00000002676) ITPK1 (ENSSMAG00000002654) ENSSMAG00000024877 ENSSMAG00000002522 chmp3 (ENSSMAG00000031524) ENSSMAG00000033982 mrpl35 (ENSSMAG00000002498) ENSSMAG00000002423 ENSSMAG00000002328 ENSSMAG00000002308 #22 ENSSMAG00000032047 #31 ENSSMAG00000002237 #31 ENSSMAG00000002108 ENSSMAG00000002092 tdrd9 (ENSSMAG00000001831) rtn1a (ENSSMAG00000001772) LRRC9 (ENSSMAG00000001734) pcnx4 (ENSSMAG00000001695) dhrs7 (ENSSMAG00000001679) ppm1aa (ENSSMAG00000001649) six6a (ENSSMAG00000001637) six1a (ENSSMAG00000033162) six4a (ENSSMAG00000001623) mnat1 (ENSSMAG00000031632) trmt5 (ENSSMAG00000001616) Tongue sole MODERN SPECIES PRIMA1 (ENSCSEG00000001038) ENSCSEG00000001041 UNC79 (ENSCSEG00000001043) btbd7 (ENSCSEG00000001199) UBR7 (ENSCSEG00000001219) ITPK1 (ENSCSEG00000001230) plk4 (ENSCSEG00000001246) HSPA4L (ENSCSEG00000001300) chmp3 (ENSCSEG00000001324) ENSCSEG00000001329 ENSCSEG00000001336 mrpl35 (ENSCSEG00000001344) ENSCSEG00000001349 ENSCSEG00000001358 zfyve28 (ENSCSEG00000001373) FGFRL1 (ENSCSEG00000001383) #22 ENSCSEG00000001386 ENSCSEG00000001391 tdrd9 (ENSCSEG00000001411) rtn1a (ENSCSEG00000001469) LRRC9 (ENSCSEG00000001482) pcnx4 (ENSCSEG00000001497) dhrs7 (ENSCSEG00000001501) ppm1aa (ENSCSEG00000001508) six6a (ENSCSEG00000001514) six1b (ENSCSEG00000001519) six4a (ENSCSEG00000001521) mnat1 (ENSCSEG00000001526) trmt5 (ENSCSEG00000001533) slc38a6 (ENSCSEG00000001537) prkcha (ENSCSEG00000001545) Anabantaria ANCESTRAL SPECIES 10 ENSGT00390000006979.b ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Zig-zag eel MODERN SPECIES 14 DDX24 (ENSMAMG00000003235) OTUB2 (ENSMAMG00000003245) asb2b (ENSMAMG00000003156) PRIMA1 (ENSMAMG00000003138) UNC79 (ENSMAMG00000003018) BTBD7 (ENSMAMG00000002962) UBR7 (ENSMAMG00000002937) ITPK1 (ENSMAMG00000002884) plk4 (ENSMAMG00000002701) ENSMAMG00000002640 chmp3 (ENSMAMG00000002626) ENSMAMG00000002601 mrpl35 (ENSMAMG00000002561) ENSMAMG00000002503 ENSMAMG00000002478 ENSMAMG00000002433 #22 ENSMAMG00000002378 #31 ENSMAMG00000002196 ENSMAMG00000002165 tdrd9 (ENSMAMG00000002068) RTN1 (ENSMAMG00000001999) LRRC9 (ENSMAMG00000001941) pcnx4 (ENSMAMG00000001886) dhrs7 (ENSMAMG00000001868) ppm1aa (ENSMAMG00000001836) six6a (ENSMAMG00000001822) six1a (ENSMAMG00000001815) six4a (ENSMAMG00000001799) mnat1 (ENSMAMG00000001768) trmt5 (ENSMAMG00000001758) slc38a6 (ENSMAMG00000001737) Anabantoidei ANCESTRAL SPECIES 9 ENSGT00390000006979.b ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Climbing perch MODERN SPECIES 3 DDX24 (ENSATEG00000022048) OTUB2 (ENSATEG00000027134) asb2b (ENSATEG00000022043) PRIMA1 (ENSATEG00000022034) UNC79 (ENSATEG00000021983) BTBD7 (ENSATEG00000021941) UBR7 (ENSATEG00000021928) ITPK1 (ENSATEG00000021888) plk4 (ENSATEG00000021868) ENSATEG00000021834 chmp3 (ENSATEG00000021819) ENSATEG00000021808 mrpl35 (ENSATEG00000021800) ENSATEG00000021751 ENSATEG00000021730 ENSATEG00000021716 #22 ENSATEG00000021702 #31 ENSATEG00000021699 ENSATEG00000027251 ENSATEG00000030056 GSC2 (ENSATEG00000021658) ess2 (ENSATEG00000021644) dgcr2 (ENSATEG00000021625) car15 (ENSATEG00000021605) setd1ba (ENSATEG00000021563) rhof (ENSATEG00000021545) tmem120b (ENSATEG00000021506) morn3 (ENSATEG00000021500) orai1b (ENSATEG00000021497) KDM2B (ENSATEG00000021455) rnf34b (ENSATEG00000021398) Siamese fighting fish MODERN SPECIES 12 OTUB2 (ENSBSLG00000017469) asb2b (ENSBSLG00000017540) PRIMA1 (ENSBSLG00000017577) UNC79 (ENSBSLG00000017607) ENSBSLG00000018040 btbd7 (ENSBSLG00000018044) UBR7 (ENSBSLG00000018071) ITPK1 (ENSBSLG00000018095) plk4 (ENSBSLG00000018127) HSPA4L (ENSBSLG00000018924) chmp3 (ENSBSLG00000020397) ENSBSLG00000020412 mrpl35 (ENSBSLG00000020428) CFAP99 (ENSBSLG00000020429) zfyve28 (ENSBSLG00000021184) FGFRL1 (ENSBSLG00000021524) #22 ENSBSLG00000021709 #31 ENSBSLG00000021724 #31 KIF15 (ENSBSLG00000021759) ENSBSLG00000022145 rtn1a (ENSBSLG00000022374) pcnx4 (ENSBSLG00000022846) dhrs7 (ENSBSLG00000022950) ppm1aa (ENSBSLG00000022953) six6a (ENSBSLG00000022958) six1b (ENSBSLG00000022962) six4a (ENSBSLG00000022968) mnat1 (ENSBSLG00000022974) trmt5 (ENSBSLG00000022995) slc38a6 (ENSBSLG00000023004) prkcha (ENSBSLG00000023048) Ovalentaria ANCESTRAL SPECIES 10 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Atherinomorphae ANCESTRAL SPECIES 11 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Cyprinodontiformes ANCESTRAL SPECIES 23 ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Aplocheiloidei ANCESTRAL SPECIES 15 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01100000264814 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Turquoise killifish MODERN SPECIES 1625 ASB2B (ENSNFUG00015019876) PRIMA1 (ENSNFUG00015019872) CABZ01080274.1 (ENSNFUG00015019769) ENSNFUG00015019757 btbd7 (ENSNFUG00015019749) UBR7 (ENSNFUG00015019729) ITPK1 (ENSNFUG00015019694) ENSNFUG00015019679 ENSNFUG00015019648 HSPA4L (ENSNFUG00015019206) chmp3 (ENSNFUG00015019191) ENSNFUG00015019183 mrpl35 (ENSNFUG00015019177) ENSNFUG00015019159 ZFYVE28 (ENSNFUG00015019072) FGFRL1 (ENSNFUG00015019058) #22 ENSNFUG00015019052 #31 KIF15 (ENSNFUG00015018987) ENSNFUG00015018980 ENSNFUG00015018979 RTN1 (ENSNFUG00015018823) LRRC9 (ENSNFUG00015018811) PCNXL4 (ENSNFUG00015018756) dhrs7 (ENSNFUG00015018749) PPM1A (ENSNFUG00015018747) six6a (ENSNFUG00015018745) SIX1 (ENSNFUG00015018742) SIX4B (ENSNFUG00015018740) MNAT1 (ENSNFUG00015018737) TRMT5 (ENSNFUG00015018735) slc38a6 (ENSNFUG00015018566) Mangrove rivulus MODERN SPECIES 1 ENSKMAG00000004538 asb2b (ENSKMAG00000004559) PRIMA1 (ENSKMAG00000004580) UNC79 (ENSKMAG00000004619) btbd7 (ENSKMAG00000004767) UBR7 (ENSKMAG00000004852) ITPK1 (ENSKMAG00000004955) plk4 (ENSKMAG00000005004) HSPA4L (ENSKMAG00000005034) chmp3 (ENSKMAG00000005150) ENSKMAG00000005170 mrpl35 (ENSKMAG00000005185) ENSKMAG00000005200 ENSKMAG00000005227 zfyve28 (ENSKMAG00000005267) FGFRL1 (ENSKMAG00000005374) #22 tacc3 (ENSKMAG00000005405) #31 ENSKMAG00000005428 ENSKMAG00000005491 tdrd9 (ENSKMAG00000005523) rtn1b (ENSKMAG00000005627) LRRC9 (ENSKMAG00000005791) pcnx4 (ENSKMAG00000005855) dhrs7 (ENSKMAG00000005878) ppm1aa (ENSKMAG00000005892) six6a (ENSKMAG00000005920) six1b (ENSKMAG00000005933) six4a (ENSKMAG00000005948) mnat1 (ENSKMAG00000005962) trmt5 (ENSKMAG00000005992) slc38a6 (ENSKMAG00000006022) Cyprinodontoidei ANCESTRAL SPECIES 8 ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Poeciliinae ANCESTRAL SPECIES 8 ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Poecilia ANCESTRAL SPECIES 10 ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 NAME_6 ANCESTRAL SPECIES 231 ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583.g ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 Sailfin molly MODERN SPECIES 852 ITPK1 (ENSPLAG00000011394) plk4 (ENSPLAG00000011343) HSPA4L (ENSPLAG00000011331) chmp3 (ENSPLAG00000000246) ENSPLAG00000011302 mrpl35 (ENSPLAG00000011281) ENSPLAG00000011276 ENSPLAG00000011242 zfyve28 (ENSPLAG00000011145) FGFRL1 (ENSPLAG00000011127) #22 ENSPLAG00000011094 #31 ENSPLAG00000011042 ENSPLAG00000010976 Amazon molly MODERN SPECIES 650 ENSPFOG00000000569 plk4 (ENSPFOG00000000626) HSPA4L (ENSPFOG00000000839) chmp3 (ENSPFOG00000001018) ENSPFOG00000001076 mrpl35 (ENSPFOG00000001115) ENSPFOG00000001139 ENSPFOG00000001198 zfyve28 (ENSPFOG00000001328) FGFRL1 (ENSPFOG00000001471) #22 tacc3 (ENSPFOG00000001547) #31 ENSPFOG00000001812 ENSPFOG00000002349 ENSPFOG00000024076 tdrd9 (ENSPFOG00000002400) ENSPFOG00000003365 ENSPFOG00000023681 RTN1 (ENSPFOG00000003386) LRRC9 (ENSPFOG00000003527) pcnx4 (ENSPFOG00000003704) dhrs7 (ENSPFOG00000003816) ppm1aa (ENSPFOG00000003923) six6a (ENSPFOG00000004004) six1b (ENSPFOG00000004024) six4a (ENSPFOG00000004053) Guppy MODERN SPECIES 453 OTUB2 (ENSPREG00000014540) asb2b (ENSPREG00000014560) PRIMA1 (ENSPREG00000014604) ENSPREG00000014616 ENSPREG00000014627 btbd7 (ENSPREG00000014636) ITPK1 (ENSPREG00000014656) plk4 (ENSPREG00000014672) HSPA4L (ENSPREG00000014754) chmp3 (ENSPREG00000014782) ENSPREG00000014804 mrpl35 (ENSPREG00000014850) ENSPREG00000014871 ENSPREG00000014892 zfyve28 (ENSPREG00000014905) FGFRL1 (ENSPREG00000014929) #22 tacc3 (ENSPREG00000014989) #31 ENSPREG00000015092 ENSPREG00000015116 ENSPREG00000015154 tdrd9 (ENSPREG00000015184) ENSPREG00000015284 LRRC9 (ENSPREG00000015300) pcnx4 (ENSPREG00000015351) dhrs7 (ENSPREG00000015404) ppm1aa (ENSPREG00000015444) six6a (ENSPREG00000015458) six1b (ENSPREG00000015465) six4a (ENSPREG00000015470) mnat1 (ENSPREG00000015484) trmt5 (ENSPREG00000015503) Platyfish MODERN SPECIES 10 asb2b (ENSXMAG00000013587) PRIMA1 (ENSXMAG00000013586) UNC79 (ENSXMAG00000013583) ENSXMAG00000023185 btbd7 (ENSXMAG00000013579) ITPK1 (ENSXMAG00000013574) plk4 (ENSXMAG00000013565) HSPA4L (ENSXMAG00000013555) chmp3 (ENSXMAG00000024383) ENSXMAG00000013551 mrpl35 (ENSXMAG00000013548) ENSXMAG00000024143 ENSXMAG00000013544 ENSXMAG00000021336 zfyve28 (ENSXMAG00000013540) FGFRL1 (ENSXMAG00000013536) #22 tacc3 (ENSXMAG00000029971) #31 ENSXMAG00000013525 ENSXMAG00000007417 tdrd9 (ENSXMAG00000018300) rtn1b (ENSXMAG00000018283) ENSXMAG00000026047 LRRC9 (ENSXMAG00000013518) pcnx4 (ENSXMAG00000013505) dhrs7 (ENSXMAG00000013493) ppm1aa (ENSXMAG00000013482) six6a (ENSXMAG00000025521) six1b (ENSXMAG00000026312) six4a (ENSXMAG00000013480) mnat1 (ENSXMAG00000013476) ENSXMAG00000023503 NAME_4 ANCESTRAL SPECIES 18 ENSGT00940000155490.b ENSGT00940000154730.a ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Mummichog MODERN SPECIES 2212 ITPK1 (ENSFHEG00000009450) plk4 (ENSFHEG00000009369) HSPA4L (ENSFHEG00000009345) chmp3 (ENSFHEG00000009265) ENSFHEG00000009221 mrpl35 (ENSFHEG00000009211) ENSFHEG00000009206 ENSFHEG00000000214 zfyve28 (ENSFHEG00000009165) FGFRL1 (ENSFHEG00000009089) #22 ENSFHEG00000009055 #31 ENSFHEG00000008941 tdrd9 (ENSFHEG00000008883) rtn1b (ENSFHEG00000008620) LRRC9 (ENSFHEG00000008584) pcnx4 (ENSFHEG00000008311) dhrs7 (ENSFHEG00000008182) ppm1aa (ENSFHEG00000008176) six6a (ENSFHEG00000008169) six1b (ENSFHEG00000008146) six4a (ENSFHEG00000008129) mnat1 (ENSFHEG00000008120) trmt5 (ENSFHEG00000008062) slc38a6 (ENSFHEG00000008049) prkcha (ENSFHEG00000008024) Sheepshead minnow MODERN SPECIES 211 ENSCVAG00000007121 zfyve28 (ENSCVAG00000007145) FGFRL1 (ENSCVAG00000007188) #22 tacc3 (ENSCVAG00000007216) #31 ENSCVAG00000007354 ENSCVAG00000007363 tdrd9 (ENSCVAG00000007427) rtn1b (ENSCVAG00000007443) ENSCVAG00000007481 pcnx4 (ENSCVAG00000007491) dhrs7 (ENSCVAG00000007514) ppm1aa (ENSCVAG00000007554) six6a (ENSCVAG00000007558) six1b (ENSCVAG00000007565) six4a (ENSCVAG00000007591) mnat1 (ENSCVAG00000007604) trmt5 (ENSCVAG00000007630) slc38a6 (ENSCVAG00000007643) Oryzias ANCESTRAL SPECIES 3 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00940000174626 ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Oryzias_b ANCESTRAL SPECIES 12 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00940000174626 ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Indian medaka MODERN SPECIES asb2b (ENSOMEG00000023191) PRIMA1 (ENSOMEG00000023204) ENSOMEG00000023211 ENSOMEG00000023227 btbd7 (ENSOMEG00000005641) UBR7 (ENSOMEG00000005668) ITPK1 (ENSOMEG00000005724) plk4 (ENSOMEG00000005801) HSPA4L (ENSOMEG00000005938) chmp3 (ENSOMEG00000005976) REEP1 (ENSOMEG00000006000) mrpl35 (ENSOMEG00000006008) ENSOMEG00000000131 ENSOMEG00000006051 zfyve28 (ENSOMEG00000000659) FGFRL1 (ENSOMEG00000006126) #22 ENSOMEG00000006165 #31 ENSOMEG00000006225 ENSOMEG00000006239 tdrd9 (ENSOMEG00000006369) rtn1b (ENSOMEG00000006424) LRRC9 (ENSOMEG00000006458) pcnx4 (ENSOMEG00000006477) dhrs7 (ENSOMEG00000006492) ppm1aa (ENSOMEG00000006533) six6a (ENSOMEG00000006543) six1b (ENSOMEG00000006552) six4a (ENSOMEG00000006599) mnat1 (ENSOMEG00000006617) trmt5 (ENSOMEG00000006629) slc38a6 (ENSOMEG00000006707) Javanese ricefish MODERN SPECIES 14 atxn3 (ENSOJAG00000010990) SERPINA10 (ENSOJAG00000011214) DDX24 (ENSOJAG00000011233) OTUB2 (ENSOJAG00000011254) asb2b (ENSOJAG00000011270) PRIMA1 (ENSOJAG00000011290) btbd7 (ENSOJAG00000012170) UBR7 (ENSOJAG00000012193) ITPK1 (ENSOJAG00000012218) HSPA4L (ENSOJAG00000012323) chmp3 (ENSOJAG00000012751) ENSOJAG00000012782 mrpl35 (ENSOJAG00000012793) ENSOJAG00000012814 zfyve28 (ENSOJAG00000012834) FGFRL1 (ENSOJAG00000012887) #22 tacc3 (ENSOJAG00000012904) #31 ENSOJAG00000013526 ENSOJAG00000013554 ENSOJAG00000013712 LRRC9 (ENSOJAG00000013737) pcnx4 (ENSOJAG00000013814) dhrs7 (ENSOJAG00000013909) ppm1aa (ENSOJAG00000013923) six6a (ENSOJAG00000013999) six1b (ENSOJAG00000014017) six4a (ENSOJAG00000014037) mnat1 (ENSOJAG00000014044) TRMT5 (ENSOJAG00000014065) slc38a6 (ENSOJAG00000014080) hif1ab (ENSOJAG00000014263) Oryzias_a ANCESTRAL SPECIES 11 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00940000174626 ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Japanese Medaka HdrR MODERN SPECIES 14 asb2b (ENSORLG00000023238) PRIMA1 (ENSORLG00000020310) ENSORLG00000022067 ENSORLG00000016001 btbd7 (ENSORLG00000015999) UBR7 (ENSORLG00000015990) ITPK1 (ENSORLG00000015980) plk4 (ENSORLG00000015971) HSPA4L (ENSORLG00000015961) chmp3 (ENSORLG00000015935) REEP1 (ENSORLG00000024285) mrpl35 (ENSORLG00000015918) ENSORLG00000015915 ENSORLG00000028951 zfyve28 (ENSORLG00000015910) FGFRL1 (ENSORLG00000015894) #22 ENSORLG00000015891 #31 ENSORLG00000015872 ENSORLG00000025849 tdrd9 (ENSORLG00000015842) rtn1b (ENSORLG00000015817) LRRC9 (ENSORLG00000015805) pcnx4 (ENSORLG00000015793) dhrs7 (ENSORLG00000015780) ppm1aa (ENSORLG00000015773) six6a (ENSORLG00000015766) six1b (ENSORLG00000015761) six4a (ENSORLG00000015756) mnat1 (ENSORLG00000015749) trmt5 (ENSORLG00000015734) slc38a6 (ENSORLG00000015725) Chinese medaka MODERN SPECIES 1096 aspg (ENSOSIG00000015968) KIF26A (ENSOSIG00000016350) TMEM179 (ENSOSIG00000016444) ENSOSIG00000016447 PRIMA1 (ENSOSIG00000006774) ENSOSIG00000006778 btbd7 (ENSOSIG00000006780) UBR7 (ENSOSIG00000006783) ITPK1 (ENSOSIG00000006794) plk4 (ENSOSIG00000006797) HSPA4L (ENSOSIG00000006799) chmp3 (ENSOSIG00000007015) ENSOSIG00000007020 mrpl35 (ENSOSIG00000007022) zfyve28 (ENSOSIG00000007027) FGFRL1 (ENSOSIG00000007029) #22 ENSOSIG00000007033 #31 ENSOSIG00000007055 tdrd9 (ENSOSIG00000007096) ENSOSIG00000007101 rtn1b (ENSOSIG00000007103) LRRC9 (ENSOSIG00000007114) pcnx4 (ENSOSIG00000007126) dhrs7 (ENSOSIG00000007151) ppm1aa (ENSOSIG00000007152) six6a (ENSOSIG00000007153) six1b (ENSOSIG00000007154) six4a (ENSOSIG00000007155) mnat1 (ENSOSIG00000007156) trmt5 (ENSOSIG00000007157) slc38a6 (ENSOSIG00000007159) Ovalentaria_B ANCESTRAL SPECIES 18 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Pomacentridae ANCESTRAL SPECIES 19 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Pomacentridae_A ANCESTRAL SPECIES 19 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Amphiprion ANCESTRAL SPECIES 12 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Orange clownfish MODERN SPECIES 9 asb2b (ENSAPEG00000023753) PRIMA1 (ENSAPEG00000023740) UNC79 (ENSAPEG00000023660) ENSAPEG00000023639 btbd7 (ENSAPEG00000023609) UBR7 (ENSAPEG00000023586) ITPK1 (ENSAPEG00000023567) plk4 (ENSAPEG00000023476) HSPA4L (ENSAPEG00000023399) chmp3 (ENSAPEG00000023384) ENSAPEG00000023374 mrpl35 (ENSAPEG00000023364) ENSAPEG00000023354 CFAP99 (ENSAPEG00000023326) zfyve28 (ENSAPEG00000023286) FGFRL1 (ENSAPEG00000023262) #22 ENSAPEG00000023245 #31 KIF15 (ENSAPEG00000023127) ENSAPEG00000023103 tdrd9 (ENSAPEG00000023023) rtn1b (ENSAPEG00000022976) LRRC9 (ENSAPEG00000022885) dhrs7 (ENSAPEG00000022850) pcnx4 (ENSAPEG00000022829) ppm1aa (ENSAPEG00000022823) six6a (ENSAPEG00000022787) six1b (ENSAPEG00000022780) six4a (ENSAPEG00000022765) mnat1 (ENSAPEG00000022745) trmt5 (ENSAPEG00000022718) slc38a6 (ENSAPEG00000022688) Clown anemonefish MODERN SPECIES 1774 asb2b (ENSAOCG00000002503) PRIMA1 (ENSAOCG00000006204) UNC79 (ENSAOCG00000006325) ENSAOCG00000006341 btbd7 (ENSAOCG00000006425) UBR7 (ENSAOCG00000006470) ITPK1 (ENSAOCG00000006525) plk4 (ENSAOCG00000006564) HSPA4L (ENSAOCG00000006635) chmp3 (ENSAOCG00000006675) ENSAOCG00000006734 mrpl35 (ENSAOCG00000000336) ENSAOCG00000001946 CFAP99 (ENSAOCG00000006817) zfyve28 (ENSAOCG00000006901) FGFRL1 (ENSAOCG00000006942) #22 ENSAOCG00000006979 #31 KIF15 (ENSAOCG00000000384) ENSAOCG00000007280 tdrd9 (ENSAOCG00000007386) rtn1b (ENSAOCG00000007425) LRRC9 (ENSAOCG00000007572) pcnx4 (ENSAOCG00000007613) dhrs7 (ENSAOCG00000000420) ppm1aa (ENSAOCG00000007660) six6a (ENSAOCG00000007670) six1b (ENSAOCG00000007681) six4a (ENSAOCG00000007695) mnat1 (ENSAOCG00000007722) trmt5 (ENSAOCG00000007757) slc38a6 (ENSAOCG00000007791) Spiny chromis MODERN SPECIES 49 asb2b (ENSAPOG00000000923) PRIMA1 (ENSAPOG00000013833) UNC79 (ENSAPOG00000014115) ENSAPOG00000014157 btbd7 (ENSAPOG00000014202) UBR7 (ENSAPOG00000014220) ITPK1 (ENSAPOG00000014291) plk4 (ENSAPOG00000014313) HSPA4L (ENSAPOG00000014433) chmp3 (ENSAPOG00000014450) ENSAPOG00000014481 mrpl35 (ENSAPOG00000014486) ENSAPOG00000014532 ENSAPOG00000014541 zfyve28 (ENSAPOG00000014656) FGFRL1 (ENSAPOG00000014697) #22 ENSAPOG00000014852 #31 ENSAPOG00000015043 ENSAPOG00000015068 tdrd9 (ENSAPOG00000015220) rtn1b (ENSAPOG00000015236) LRRC9 (ENSAPOG00000015352) pcnx4 (ENSAPOG00000015372) dhrs7 (ENSAPOG00000015382) ppm1aa (ENSAPOG00000015393) six6a (ENSAPOG00000015405) six1b (ENSAPOG00000015427) six4a (ENSAPOG00000015436) mnat1 (ENSAPOG00000015452) trmt5 (ENSAPOG00000015490) slc38a6 (ENSAPOG00000015507) Bicolor damselfish MODERN SPECIES 244 OTUB2 (ENSSPAG00000011635) asb2b (ENSSPAG00000011657) PRIMA1 (ENSSPAG00000011697) UNC79 (ENSSPAG00000011719) btbd7 (ENSSPAG00000011843) UBR7 (ENSSPAG00000011895) ITPK1 (ENSSPAG00000012041) plk4 (ENSSPAG00000012088) HSPA4L (ENSSPAG00000012120) chmp3 (ENSSPAG00000012214) ENSSPAG00000012238 mrpl35 (ENSSPAG00000012265) ENSSPAG00000012283 ENSSPAG00000012305 zfyve28 (ENSSPAG00000012347) FGFRL1 (ENSSPAG00000012425) #22 ENSSPAG00000012469 #31 ENSSPAG00000012482 ENSSPAG00000012494 ENSSPAG00000012540 tdrd9 (ENSSPAG00000012556) rtn1b (ENSSPAG00000012624) LRRC9 (ENSSPAG00000012665) pcnx4 (ENSSPAG00000012841) dhrs7 (ENSSPAG00000012853) ppm1aa (ENSSPAG00000012863) six6a (ENSSPAG00000012884) six1b (ENSSPAG00000012895) six4a (ENSSPAG00000012903) mnat1 (ENSSPAG00000012911) trmt5 (ENSSPAG00000012940) Cichlidae ANCESTRAL SPECIES 22 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226 ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B ENSGT00940000156982 Pseudocrenilabrinae ANCESTRAL SPECIES 8 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.f ENSGT00940000155226.e ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B Pseudocrenilabrinae_A ANCESTRAL SPECIES 6 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.f ENSGT00940000155226.e ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B Haplochromini ANCESTRAL SPECIES 7 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.f ENSGT00940000155226.e ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B Burton s mouthbrooder MODERN SPECIES 285 asb2b (ENSHBUG00000021856) PRIMA1 (ENSHBUG00000021867) UNC79 (ENSHBUG00000021991) ENSHBUG00000022013 btbd7 (ENSHBUG00000022107) UBR7 (ENSHBUG00000022129) ITPK1 (ENSHBUG00000022169) plk4 (ENSHBUG00000022180) HSPA4L (ENSHBUG00000022266) chmp3 (ENSHBUG00000022290) ENSHBUG00000022317 mrpl35 (ENSHBUG00000022325) ENSHBUG00000022359 ENSHBUG00000022382 zfyve28 (ENSHBUG00000022405) FGFRL1 (ENSHBUG00000022442) #22 ENSHBUG00000022545 #31 ENSHBUG00000022731 tdrd9 (ENSHBUG00000022779) rtn1b (ENSHBUG00000022816) LRRC9 (ENSHBUG00000022869) pcnx4 (ENSHBUG00000022892) dhrs7 (ENSHBUG00000022902) dhrs7 (ENSHBUG00000022921) ppm1aa (ENSHBUG00000022955) six6a (ENSHBUG00000022966) six1b (ENSHBUG00000022985) six4a (ENSHBUG00000022997) mnat1 (ENSHBUG00000023081) trmt5 (ENSHBUG00000023000) ENSHBUG00000023120 Haplochromini_A ANCESTRAL SPECIES 7 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.f ENSGT00940000155226.e ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B P. nyererei MODERN SPECIES 305 asb2b (ENSPNYG00000022784) PRIMA1 (ENSPNYG00000022780) UNC79 (ENSPNYG00000022766) ENSPNYG00000022758 btbd7 (ENSPNYG00000022749) UBR7 (ENSPNYG00000022720) ITPK1 (ENSPNYG00000022711) plk4 (ENSPNYG00000022685) HSPA4L (ENSPNYG00000022654) chmp3 (ENSPNYG00000022642) ENSPNYG00000022632 mrpl35 (ENSPNYG00000022623) ENSPNYG00000022617 ENSPNYG00000022598 zfyve28 (ENSPNYG00000022586) FGFRL1 (ENSPNYG00000022576) #22 ENSPNYG00000022562 #31 ENSPNYG00000022479 ENSPNYG00000022452 tdrd9 (ENSPNYG00000022319) rtn1b (ENSPNYG00000022278) LRRC9 (ENSPNYG00000022217) pcnx4 (ENSPNYG00000022179) dhrs7 (ENSPNYG00000022151) ppm1aa (ENSPNYG00000022133) six6a (ENSPNYG00000022126) six1b (ENSPNYG00000022047) six4a (ENSPNYG00000022042) mnat1 (ENSPNYG00000022028) trmt5 (ENSPNYG00000022005) slc38a6 (ENSPNYG00000021953) Haplochromini_B ANCESTRAL SPECIES 13 ENSGT00940000155490.b ENSGT00390000006240 ENSGT00390000011802 ENSGT01030000234834 ENSGT00390000014092 ENSGT00390000017610.a ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00730000111999 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 ENSGT00940000158858 #31 ENSGT00940000156463 ENSGT00390000002089.b ENSGT00940000157035 ENSGT00940000155077 ENSGT00940000158583 ENSGT00940000156899 ENSGT00940000155226.f ENSGT00940000155226.e ENSGT00940000154832.eb ENSGT00940000160091 ENSGT00940000156487 ENSGT00940000165916 ENSGT00390000002319 ENSGT00940000153304.B Eastern happy MODERN SPECIES 10 PRIMA1 (ENSACLG00000022143) UNC79 (ENSACLG00000022013) ENSACLG00000021997 btbd7 (ENSACLG00000021933) UBR7 (ENSACLG00000021915) ITPK1 (ENSACLG00000021857) plk4 (ENSACLG00000021708) HSPA4L (ENSACLG00000021609) chmp3 (ENSACLG00000021591) ENSACLG00000021557 mrpl35 (ENSACLG00000021543) ENSACLG00000021517 ENSACLG00000021485 ENSACLG00000021466 zfyve28 (ENSACLG00000021409) FGFRL1 (ENSACLG00000021376) #22 ENSACLG00000021304 #31 ENSACLG00000020969 ENSACLG00000020948 tdrd9 (ENSACLG00000020660) rtn1b (ENSACLG00000020621) LRRC9 (ENSACLG00000020478) pcnx4 (ENSACLG00000020462) dhrs7 (ENSACLG00000020389) dhrs7 (ENSACLG00000020365) ppm1aa (ENSACLG00000020346) six6a (ENSACLG00000020326) six1b (ENSACLG00000020308) six4a (ENSACLG00000020299) mnat1 (ENSACLG00000020264) trmt5 (ENSACLG00000020216) Zebra mbuna MODERN SPECIES 1101 asb2b (ENSMZEG00005008387) PRIMA1 (ENSMZEG00005008375) UNC79 (ENSMZEG00005008292) btbd7 (ENSMZEG00005008235) UBR7 (ENSMZEG00005008214) ENSMZEG00005008198 ITPK1 (ENSMZEG00005008165) plk4 (ENSMZEG00005008154) HSPA4L (ENSMZEG00005008116) chmp3 (ENSMZEG00005008095) ENSMZEG00005008073 mrpl35 (ENSMZEG00005008064) ENSMZEG00005008041 ENSMZEG00005008021 zfyve28 (ENSMZEG00005007984) FGFRL1 (ENSMZEG00005007966) #22 ENSMZEG00005007944 #31 ENSMZEG00005007810 ENSMZEG00005007774 tdrd9 (ENSMZEG00005007746) ENSMZEG00005007721 ENSMZEG00005007709 LRRC9 (ENSMZEG00005007634) pcnx4 (ENSMZEG00005007610) dhrs7 (ENSMZEG00005007563) dhrs7 (ENSMZEG00005007541) ppm1aa (ENSMZEG00005007505) six6a (ENSMZEG00005007497) six1b (ENSMZEG00005007476) six4a (ENSMZEG00005007464) mnat1 (ENSMZEG00005007438) Lyretail cichlid MODERN SPECIES 299 DDX24 (ENSNBRG00000007296) OTUB2 (ENSNBRG00000007306) ENSNBRG00000007330 PRIMA1 (ENSNBRG00000007348) UNC79 (ENSNBRG00000007373) btbd7 (ENSNBRG00000007533) UBR7 (ENSNBRG00000007590) ITPK1 (ENSNBRG00000007780) plk4 (ENSNBRG00000007842) HSPA4L (ENSNBRG00000007983) chmp3 (ENSNBRG00000008027) ENSNBRG00000008047 mrpl35 (ENSNBRG00000008083) CFAP99 (ENSNBRG00000008114) ENSNBRG00000008211 FGFRL1 (ENSNBRG00000008247) #22 ENSNBRG00000008278 #31 KIF15 (ENSNBRG00000008380) tdrd9 (ENSNBRG00000008735) ENSNBRG00000009069 rtn1b (ENSNBRG00000009094) LRRC9 (ENSNBRG00000009131) pcnx4 (ENSNBRG00000009262) dhrs7 (ENSNBRG00000009342) dhrs7 (ENSNBRG00000009415) ppm1aa (ENSNBRG00000009438) six6a (ENSNBRG00000009445) six1b (ENSNBRG00000009454) six4a (ENSNBRG00000009481) mnat1 (ENSNBRG00000009499) trmt5 (ENSNBRG00000009536) Nile tilapia MODERN SPECIES 10 DDX24 (ENSONIG00000020143) OTUB2 (ENSONIG00000020142) asb2b (ENSONIG00000020141) PRIMA1 (ENSONIG00000030071) UNC79 (ENSONIG00000020140) btbd7 (ENSONIG00000020139) UBR7 (ENSONIG00000020138) itpk1 (ENSONIG00000029320) plk4 (ENSONIG00000020136) HSPA4L (ENSONIG00000020135) chmp3 (ENSONIG00000020134) ENSONIG00000020133 mrpl35 (ENSONIG00000020132) ENSONIG00000022450 zfyve28 (ENSONIG00000020131) FGFRL1 (ENSONIG00000042768) #22 ENSONIG00000020129 #31 ENSONIG00000029907 KIF15 (ENSONIG00000020128) ENSONIG00000033455 tdrd9 (ENSONIG00000020126) rtn1b (ENSONIG00000020125) LRRC9 (ENSONIG00000020124) pcnx4 (ENSONIG00000020123) dhrs7 (ENSONIG00000020122) dhrs7 (ENSONIG00000020121) ppm1a (ENSONIG00000020120) six6a (ENSONIG00000020119) six1b (ENSONIG00000020118) six4a (ENSONIG00000020117) mnat1 (ENSONIG00000020116) Midas cichlid MODERN SPECIES 504 OTUB2 (ENSACIG00000024337) asb2b (ENSACIG00000024336) PRIMA1 (ENSACIG00000024335) UNC79 (ENSACIG00000024334) btbd7 (ENSACIG00000024333) UBR7 (ENSACIG00000024330) ITPK1 (ENSACIG00000024329) plk4 (ENSACIG00000024325) HSPA4L (ENSACIG00000024320) chmp3 (ENSACIG00000024319) REEP1 (ENSACIG00000024317) mrpl35 (ENSACIG00000024315) ENSACIG00000024313 CFAP99 (ENSACIG00000024312) ENSACIG00000024311 FGFRL1 (ENSACIG00000024310) #22 ENSACIG00000024308 #31 KIF15 (ENSACIG00000024304) ENSACIG00000024302 tdrd9 (ENSACIG00000024299) rtn1b (ENSACIG00000024266) LRRC9 (ENSACIG00000024246) pcnx4 (ENSACIG00000024237) dhrs7 (ENSACIG00000024234) ppm1aa (ENSACIG00000024231) six6a (ENSACIG00000024229) six1b (ENSACIG00000024226) six4a (ENSACIG00000024222) mnat1 (ENSACIG00000024219) trmt5 (ENSACIG00000024216) slc38a6 (ENSACIG00000024208) Pinecone sodierfish MODERN SPECIES 14 OTUB2 (ENSMMDG00005002592) asb2b (ENSMMDG00005002567) PRIMA1 (ENSMMDG00005002552) UNC79 (ENSMMDG00005023557) ENSMMDG00005023552 btbd7 (ENSMMDG00005023549) UBR7 (ENSMMDG00005023545) ITPK1 (ENSMMDG00005023540) plk4 (ENSMMDG00005023524) HSPA4L (ENSMMDG00005023520) chmp3 (ENSMMDG00005023517) ENSMMDG00005023514 mrpl35 (ENSMMDG00005023513) ENSMMDG00005023510 zfyve28 (ENSMMDG00005023504) FGFRL1 (ENSMMDG00005023502) #22 tacc3 (ENSMMDG00005023499) #31 ENSMMDG00005023406 ENSMMDG00005023387 tdrd9 (ENSMMDG00005023362) rtn1b (ENSMMDG00005023280) ENSMMDG00005023258 pcnx4 (ENSMMDG00005023247) dhrs7 (ENSMMDG00005023245) ppm1aa (ENSMMDG00005023243) six6a (ENSMMDG00005023242) six1b (ENSMMDG00005023240) six4a (ENSMMDG00005023237) mnat1 (ENSMMDG00005023235) trmt5 (ENSMMDG00005023225) slc38a6 (ENSMMDG00005023214) Otomorpha ANCESTRAL SPECIES 705 ENSGT01000000221578 ENSGT00940000157217 ENSGT00940000156736.c.b #22 Clupeiformes ANCESTRAL SPECIES 158 ENSGT00940000164710 ENSGT00530000063651.b ENSGT00620000087966.a ENSGT00390000009517 ENSGT00390000006223 ENSGT00390000005700.l ENSGT00940000156613 ENSGT00390000001278.b.i ENSGT00940000156316 ENSGT00940000158736 ENSGT00950000182832.C ENSGT00940000159532 ENSGT00390000007547 ENSGT00500000045231 ENSGT00940000157217 ENSGT00940000156736.c.b #22 Denticle herring MODERN SPECIES trmt61a (ENSDCDG00000031521) bag5 (ENSDCDG00000031523) coa8 (ENSDCDG00000031527) klc1a (ENSDCDG00000031533) zfyve21 (ENSDCDG00000031602) ENSDCDG00000031608 marcksl1a (ENSDCDG00000031610) bsdc1 (ENSDCDG00000031620) olig4 (ENSDCDG00000031690) FNDC5 (ENSDCDG00000031695) ldlrap1b (ENSDCDG00000031701) maco1b (ENSDCDG00000031707) XKR6 (ENSDCDG00000031725) CFAP99 (ENSDCDG00000031727) zfyve28 (ENSDCDG00000031733) FGFRL1 (ENSDCDG00000031772) #22 NT5C1A (ENSDCDG00000031774) ttc8 (ENSDCDG00000031781) UBR7 (ENSDCDG00000031791) BTBD7 (ENSDCDG00000031796) ENSDCDG00000031798 UNC79 (ENSDCDG00000031824) PRIMA1 (ENSDCDG00000031880) ENSDCDG00000031881 asb2b (ENSDCDG00000031882) OTUB2 (ENSDCDG00000031885) DDX24 (ENSDCDG00000031890) SERPINA10 (ENSDCDG00000031896) atxn3 (ENSDCDG00000031900) UBR1 (ENSDCDG00000000271) ENSDCDG00000000492 Clupeocephala ANCESTRAL SPECIES 28 ENSGT00950000182974.a.a.a.a ENSGT00940000156803 ENSGT00390000017614.f ENSGT00940000163031.b.b ENSGT00440000033329.b.a.b ENSGT00390000013770 ENSGT00440000033895 ENSGT00940000160633.b ENSGT01090000260076.b.a ENSGT00950000183196.D.b ENSGT00940000159795 ENSGT00940000165542 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00920000149123.d ENSGT00940000156736.d #22 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000153147.a.a ENSGT00940000154808.a.b ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a ENSGT00950000183137.b.b Euteleosteomorpha ANCESTRAL SPECIES 9 ENSGT00950000182974.a.a.a.a ENSGT00940000156803 ENSGT00390000017614.f ENSGT00940000163031.b.b ENSGT00440000033329.b.a.b ENSGT00390000013770 ENSGT00440000033895 ENSGT00940000160633.b ENSGT01090000260076.b.a ENSGT00950000183196.D.b ENSGT00940000159795 ENSGT00940000165542 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00920000149123.d ENSGT00940000156736.d #22 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000154808.a.b ENSGT00940000167175 ENSGT00940000165646.B ENSGT00940000157891 ENSGT00950000183033.a.b.b ENSGT00390000000618 ENSGT00940000159322 ENSGT00950000183088.a.a ENSGT00950000183137.b.b ENSGT00940000156471.b ##11 Protacanthopterygii ANCESTRAL SPECIES 19 ENSGT00950000182974.a.a.a.a ENSGT00940000156803.m ENSGT00390000017614.f ENSGT00940000163031.b.b ENSGT00440000033329.b.a.b ENSGT00390000013770 ENSGT00440000033895 ENSGT00940000160633.b ENSGT01090000260076.b.a ENSGT00950000183196.D.b ENSGT00940000159795 ENSGT00940000165542 ENSGT00940000160541 ENSGT00510000046732.B ENSGT00920000149123.d ENSGT00940000156736.d #22 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000154808.a.b ENSGT00950000183123 ENSGT00390000004405.a.c ENSGT00940000157046.E ENSGT00940000158313.a.a ENSGT00940000158675.b ENSGT00940000160528.a ENSGT00940000158956.d ENSGT00940000153147.a.a ENSGT00940000165646.B Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 320 ENSGT00940000160971.e ENSGT00940000161248.j ENSGT00950000183189.a.b.b.f ENSGT00950000182974.a.a.a.a.y.a ENSGT00940000156803.m ENSGT00390000017614.f ENSGT00940000163031.b.b.c ENSGT00440000033329.b.a.b.e ENSGT00440000033895.b ENSGT01090000260076.b.a.i ENSGT00950000183196.D.b.j ENSGT00940000159795.e ENSGT00940000165542.a ENSGT00940000160541.e ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a #22 ENSGT00390000013163.g ENSGT00940000153700.e ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00950000183123.o.a.a.b ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i ENSGT00950000183137.b.b.a ENSGT00940000156471.b.d ##11 Salmoninae_a ANCESTRAL SPECIES 12 ENSGT00940000161248.j ENSGT00950000183189.a.b.b.f ENSGT00950000182974.a.a.a.a.y.a ENSGT00940000156803.m ENSGT00390000017614.f ENSGT00940000163031.b.b.c ENSGT00440000033329.b.a.b.e ENSGT00440000033895.b ENSGT00940000160633.b.a ENSGT01090000260076.b.a.i ENSGT00950000183196.D.b.j ENSGT00940000159795.e ENSGT00940000165542.a ENSGT00940000160541.e ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a #22 ENSGT00390000013163.g ENSGT00940000153700.e ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00940000154808.a.b.m ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i ENSGT00950000183137.b.b.a ENSGT00940000156471.b.d ##11 ENSGT00940000155983.a.a.f.a.a ENSGT00990000211098 Salmo ANCESTRAL SPECIES 1 ENSGT00940000160971.e ENSGT00940000161248.j ENSGT00950000183189.a.b.b.f ENSGT00950000182974.a.a.a.a.y.a ENSGT00940000156803.m ENSGT00390000017614.f ENSGT00940000163031.b.b.c ENSGT00440000033329.b.a.b.e ENSGT00440000033895.b ENSGT01090000260076.b.a.i ENSGT00950000183196.D.b.j ENSGT00940000159795.e ENSGT00940000165542.a ENSGT00940000160541.e ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a #22 ENSGT00390000013163.g ENSGT00940000153700.e ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00950000183123.o.a.a.b ENSGT00940000153147.a.a ENSGT00940000165646.B ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i ENSGT00950000183137.b.b.a ENSGT00940000156471.b.d ##11 River trout MODERN SPECIES 22 SLITRK2 (ENSSTUG00000044950) fmr1 (ENSSTUG00000043467) AFF2 (ENSSTUG00000043367) zgc:162941 (ENSSTUG00000043310) zgc:66433 (ENSSTUG00000043232) LONRF3 (ENSSTUG00000043209) ENSSTUG00000043207 fam199x (ENSSTUG00000043150) il1rapl2 (ENSSTUG00000043062) ENSSTUG00000043050 ENSSTUG00000042915 ENSSTUG00000042842 hdac3 (ENSSTUG00000042642) ENSSTUG00000042612 hspa9 (ENSSTUG00000039509) fgfrl1b (ENSSTUG00000039436) #22 FBXO38 (ENSSTUG00000039245) csnk1a1 (ENSSTUG00000039095) ENSSTUG00000039082 ENSSTUG00000039066 spdl1 (ENSSTUG00000039037) ENSSTUG00000039022 KLHL3 (ENSSTUG00000038835) fam13b (ENSSTUG00000038726) cxcl14 (ENSSTUG00000038706) ENSSTUG00000038696 slit3 (ENSSTUG00000033027) ENSSTUG00000032787 ENSSTUG00000032766 pde6a (ENSSTUG00000032347) ##11 HTR4 (ENSSTUG00000032302) Atlantic salmon MODERN SPECIES 24 SLITRK4 (ENSSSAG00000060876) ENSSSAG00000082993 fmr1 (ENSSSAG00000053722) AFF2 (ENSSSAG00000053621) ids (ENSSSAG00000053581) lygl2 (ENSSSAG00000053544) zgc:66433 (ENSSSAG00000053506) lonrf3 (ENSSSAG00000053472) fam199x (ENSSSAG00000053452) ENSSSAG00000053419 ENSSSAG00000054771 ENSSSAG00000052986 ENSSSAG00000052932 ENSSSAG00000052912 ENSSSAG00000047960 ENSSSAG00000047900 #22 fbxo38 (ENSSSAG00000047516) csnk1a1 (ENSSSAG00000047433) ENSSSAG00000047423 spdl1 (ENSSSAG00000047397) ENSSSAG00000093198 ENSSSAG00000085929 ENSSSAG00000046126 fam13b (ENSSSAG00000047130) cxcl14 (ENSSSAG00000047101) ENSSSAG00000047093 slit3 (ENSSSAG00000044758) ARHGEF37 (ENSSSAG00000044512) ENSSSAG00000044482 pde6a (ENSSSAG00000042795) ##11 ENSSSAG00000042753 ##20 Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00940000161248.j ENSGT00950000183189.a.b.b.f ENSGT00950000182974.a.a.a.a.y.a ENSGT00940000156803.m ENSGT00390000017614.f ENSGT00940000163031.b.b.c ENSGT00440000033329.b.a.b.e ENSGT00440000033895.b ENSGT00940000160633.b.a ENSGT01090000260076.b.a.i ENSGT00950000183196.D.b.j ENSGT00940000159795.e ENSGT00940000165542.a ENSGT00940000160541.e ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a #22 ENSGT00390000013163.g ENSGT00940000153700.e ENSGT01030000234957.d ENSGT00940000153909.b.d ENSGT00510000047951.i ENSGT00940000154808.a.b.m.a ENSGT01060000253572 ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i ENSGT00950000183137.b.b.a ENSGT00940000156471.b.d ##11 Oncorhynchus_a ANCESTRAL SPECIES 20 ENSGT00940000161248.j ENSGT00950000183189.a.b.b.f ENSGT00950000182974.a.a.a.a.y.a ENSGT00940000156803.m ENSGT00390000017614.f ENSGT00940000163031.b.b.c ENSGT00440000033329.b.a.b.e ENSGT00440000033895.b ENSGT00940000160633.b.a ENSGT01090000260076.b.a.i ENSGT00950000183196.D.b.j ENSGT00940000159795.e ENSGT00940000165542.a ENSGT00940000160541.e ENSGT00920000149123.d.h.b ENSGT00940000156736.d.a #22 ENSGT00390000013163.g ENSGT00940000153700.e ENSGT01030000234957.d ENSGT00940000153909.b.d ENSGT00510000047951.i.c ENSGT00510000047951.i.d ENSGT00940000154808.a.b.m.a ENSGT01060000253572 ENSGT00940000157891.d ENSGT00950000183033.a.b.b.o ENSGT00390000000618.a ENSGT00980000199741.C ENSGT00940000159322.g.a ENSGT00950000183088.a.a.i ENSGT00950000183137.b.b.a Coho salmon MODERN SPECIES 10 fmr1 (ENSOKIG00005007772) AFF2 (ENSOKIG00005009712) ids (ENSOKIG00005009728) lygl2 (ENSOKIG00005009799) zgc:66433 (ENSOKIG00005009858) LONRF3 (ENSOKIG00005009907) fam199x (ENSOKIG00005010024) ENSOKIG00005010044 il1rapl2 (ENSOKIG00005010061) ENSOKIG00005010121 ENSOKIG00005010232 ENSOKIG00005010259 ENSOKIG00005010307 ENSOKIG00005010313 ENSOKIG00005010369 fgfrl1b (ENSOKIG00005011388) #22 FBXO38 (ENSOKIG00005011418) csnk1a1 (ENSOKIG00005011575) SIL1 (ENSOKIG00005011680) spdl1 (ENSOKIG00005011705) ENSOKIG00005011834 ENSOKIG00005011978 ENSOKIG00005011979 KLHL3 (ENSOKIG00005012034) fam13b (ENSOKIG00005012721) cxcl14 (ENSOKIG00005012842) ENSOKIG00005012866 slit3 (ENSOKIG00005012886) ENSOKIG00005012944 ENSOKIG00005012948 ENSOKIG00005012960 Chinook salmon MODERN SPECIES 13 SLITRK2 (ENSOTSG00005038236) fmr1 (ENSOTSG00005035496) ENSOTSG00005035482 ids (ENSOTSG00005035481) lygl2 (ENSOTSG00005035480) zgc:66433 (ENSOTSG00005035479) LONRF3 (ENSOTSG00005035425) fam199x (ENSOTSG00005035413) ENSOTSG00005035405 il1rapl2 (ENSOTSG00005035398) ENSOTSG00005035395 ENSOTSG00005035393 hdac3 (ENSOTSG00005034802) rell2 (ENSOTSG00005034799) hspa9 (ENSOTSG00005029601) fgfrl1b (ENSOTSG00005029587) #22 FBXO38 (ENSOTSG00005029578) csnk1a1 (ENSOTSG00005029021) ENSOTSG00005029012 SIL1 (ENSOTSG00005029007) spdl1 (ENSOTSG00005029003) Rainbow trout MODERN SPECIES 5 ENSOMYG00000006880 lygl2 (ENSOMYG00000012460) zgc:66433 (ENSOMYG00000012500) ENSOMYG00000058948 ENSOMYG00000012538 fam199x (ENSOMYG00000012581) ENSOMYG00000056565 ENSOMYG00000012626 ENSOMYG00000012713 ENSOMYG00000051071 ENSOMYG00000012746 ENSOMYG00000012808 ENSOMYG00000013014 ENSOMYG00000013022 ENSOMYG00000013135 ENSOMYG00000013894 #22 ENSOMYG00000013966 csnk1a1 (ENSOMYG00000014106) ENSOMYG00000059381 ENSOMYG00000014186 spdl1 (ENSOMYG00000023860) ENSOMYG00000057051 roa0 (ENSOMYG00000014228) ENSOMYG00000068248 ENSOMYG00000014276 fam13b (ENSOMYG00000014467) cxcl14 (ENSOMYG00000015124) ENSOMYG00000050397 casp (ENSOMYG00000015137) slit3 (ENSOMYG00000015271) ENSOMYG00000015421 Huchen MODERN SPECIES 424 il1rapl2 (ENSHHUG00000005364) ENSHHUG00000005360 ENSHHUG00000004420 ENSHHUG00000004408 hdac3 (ENSHHUG00000004298) ENSHHUG00000004293 hspa9 (ENSHHUG00000003849) fgfrl1b (ENSHHUG00000003840) #22 FBXO38 (ENSHHUG00000003834) csnk1a1 (ENSHHUG00000003199) ENSHHUG00000003192 SIL1 (ENSHHUG00000003183) spdl1 (ENSHHUG00000003176) ENSHHUG00000003159 hnrnpa0l (ENSHHUG00000003148) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 51 ENSGT00950000182974.a.a.a.a.y.b ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000165542.b ENSGT00940000160487 ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a #22 ENSGT00940000156736.d.b.b #22 ENSGT00390000013163.h ENSGT00940000153700.f ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00950000183123.o.a.a.a ENSGT00940000154808.a.b.m ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b Salmoninae_a ANCESTRAL SPECIES 41 ENSGT00950000182974.a.a.a.a.y.b ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000165542.b ENSGT00940000160487 ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a #22 ENSGT00940000156736.d.b.b #22 ENSGT00390000013163.h ENSGT00940000153700.f ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j ENSGT00950000183137.b.b.b ENSGT00940000156471.b.c ##11 Oncorhynchus ANCESTRAL SPECIES 34 ENSGT00950000183189.a.b.b.e ENSGT00950000182974.a.a.a.a.y.b ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000165542.b ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a #22 ENSGT00940000153700.f ENSGT01030000234957.c ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00940000165646.B ENSGT00940000154808.a.b.m.b ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j ENSGT00950000183137.b.b.b ENSGT00940000156471.b.c ##11 Rainbow trout MODERN SPECIES 23 commd5 (ENSOMYG00000045219) fam199x (ENSOMYG00000045224) ENSOMYG00000076308 ENSOMYG00000052516 ENSOMYG00000045234 ENSOMYG00000073707 ENSOMYG00000045242 ENSOMYG00000012332 ENSOMYG00000077312 ENSOMYG00000012345 ENSOMYG00000012377 ENSOMYG00000012519 ENSOMYG00000070081 ENSOMYG00000016338 ENSOMYG00000016371 ENSOMYG00000016584 #22 csnk1a1 (ENSOMYG00000016595) ENSOMYG00000076093 ENSOMYG00000016608 ENSOMYG00000016618 spdl1 (ENSOMYG00000016627) ENSOMYG00000016653 ENSOMYG00000016664 ENSOMYG00000016685 fam13b (ENSOMYG00000016762) cxcl14 (ENSOMYG00000016815) slit3 (ENSOMYG00000062685) ENSOMYG00000059931 ENSOMYG00000073840 ENSOMYG00000075355 ARHGEF37 (ENSOMYG00000016893) Oncorhynchus_a ANCESTRAL SPECIES 34 ENSGT00950000183189.a.b.b.e ENSGT00950000182974.a.a.a.a.y.b ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000165542.b ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a #22 ENSGT00940000153700.f ENSGT01030000234957.c ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.m.b ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j ENSGT00950000183137.b.b.b ENSGT00940000156471.b.c ##11 ENSGT01100000263544.c.a.a.a ##20 ENSGT00940000155983.a.a.e Coho salmon MODERN SPECIES 6 AFF2 (ENSOKIG00005020969) ids (ENSOKIG00005021043) zgc:66433 (ENSOKIG00005021098) LONRF3 (ENSOKIG00005021136) commd5 (ENSOKIG00005021144) fam199x (ENSOKIG00005021158) ENSOKIG00005021187 IL1RAPL2 (ENSOKIG00005021197) ENSOKIG00005021208 ENSOKIG00005021235 ENSOKIG00005021378 hdac3 (ENSOKIG00005021415) ENSOKIG00005021609 ENSOKIG00005021639 hspa9 (ENSOKIG00005021687) ENSOKIG00005021756 #22 CSNK1A1 (ENSOKIG00005021812) ENSOKIG00005021876 SIL1 (ENSOKIG00005021886) HNRNPA0 (ENSOKIG00005033788) ENSOKIG00005033804 KLHL3 (ENSOKIG00005033818) ENSOKIG00005033912 fam13b (ENSOKIG00005033929) cxcl14 (ENSOKIG00005033953) slit3 (ENSOKIG00005034059) ENSOKIG00005035500 ARHGEF37 (ENSOKIG00005035521) ENSOKIG00005035536 pde6a (ENSOKIG00005035700) ##11 SLC26A2 (ENSOKIG00005039024) ##20 Chinook salmon MODERN SPECIES 32 ENSOTSG00005008931 AFF2 (ENSOTSG00005008933) ids (ENSOTSG00005008935) zgc:66433 (ENSOTSG00005008939) ENSOTSG00005008942 commd5 (ENSOTSG00005008944) fam199x (ENSOTSG00005008951) ENSOTSG00005008954 il1rapl2 (ENSOTSG00005008955) ENSOTSG00005008960 ENSOTSG00005008962 hdac3 (ENSOTSG00005008964) rell2 (ENSOTSG00005008980) ENSOTSG00005008982 hspa9 (ENSOTSG00005008985) fgfrl1b (ENSOTSG00005008995) #22 ENSOTSG00005008996 csnk1a1 (ENSOTSG00005009001) ENSOTSG00005009007 SIL1 (ENSOTSG00005009008) spdl1 (ENSOTSG00005009010) HNRNPA0 (ENSOTSG00005009011) ENSOTSG00005009012 KLHL3 (ENSOTSG00005009014) fam13b (ENSOTSG00005009017) cxcl14 (ENSOTSG00005009021) ENSOTSG00005009025 ENSOTSG00005009028 ARHGEF37 (ENSOTSG00005009031) ENSOTSG00005009036 pde6a (ENSOTSG00005009049) ##11 Huchen MODERN SPECIES 1435 fgfrl1b (ENSHHUG00000031144) #22 FBXO38 (ENSHHUG00000031148) csnk1a1 (ENSHHUG00000031169) SIL1 (ENSHHUG00000031304) spdl1 (ENSHHUG00000031310) ENSHHUG00000031339 HNRNPA0 (ENSHHUG00000031346) ENSHHUG00000031355 KLHL3 (ENSHHUG00000031359) fam13b (ENSHHUG00000031411) cxcl14 (ENSHHUG00000031471) Salmoninae ANCESTRAL SPECIES ENSGT00940000156736.d.b.a.b #22 Huchen MODERN SPECIES 4721 ENSHHUG00000000902 ENSHHUG00000000878 ENSHHUG00000000890 hspa9 (ENSHHUG00000000733) ENSHHUG00000000725 #22 Salmoninae ANCESTRAL SPECIES 51 ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000165542.b ENSGT00940000160487 ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a #22 ENSGT00940000156736.d.b.b #22 ENSGT00390000013163.h ENSGT00940000153700.f ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00950000183123.o.a.a.a ENSGT00940000154808.a.b.m ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b Salmoninae_a ANCESTRAL SPECIES 41 ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000165542.b ENSGT00940000160487 ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.a.a #22 ENSGT00940000156736.d.b.b #22 ENSGT00390000013163.h ENSGT00940000153700.f ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00510000047951.j ENSGT00940000154808.a.b.n ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j ENSGT00950000183137.b.b.b ENSGT00940000156471.b.c ##11 ENSGT01100000263544.c.a.a.a ##20 Salmo ANCESTRAL SPECIES 47 ENSGT00950000183189.a.b.b.e ENSGT00950000182974.a.a.a.a.y.b ENSGT00940000156803.n ENSGT00940000163031.b.b.d ENSGT00440000033329.b.a.b.f ENSGT00390000013770 ENSGT00440000033895.a ENSGT00940000160633.b.b ENSGT01090000260076.b.a.j ENSGT00950000183196.D.b.i ENSGT00940000159795.f ENSGT00940000160487 ENSGT00940000160541.f ENSGT00510000046732.B ENSGT00920000149123.d.h.a ENSGT00940000156736.d.b.b #22 ENSGT00390000013163.h ENSGT00940000153700.f ENSGT01030000234957 ENSGT00940000153909.b.c ENSGT00940000154808.a.b.n ENSGT00940000154808.a.b.m ENSGT00950000183123.p ENSGT00940000157891.c ENSGT00950000183033.a.b.b.p ENSGT00390000000618.b ENSGT00940000159322.g.b ENSGT00950000183088.a.a.j ENSGT00950000183137.b.b.b ENSGT00940000156471.b.c ##11 ENSGT01100000263544.c.a.a.a.c ##20 River trout MODERN SPECIES 4 fmr1 (ENSSTUG00000027252) AFF2 (ENSSTUG00000027163) ids (ENSSTUG00000027144) zgc:66433 (ENSSTUG00000027094) ENSSTUG00000027086 commd5 (ENSSTUG00000027075) fam199x (ENSSTUG00000027052) ENSSTUG00000027042 il1rapl2 (ENSSTUG00000027039) ENSSTUG00000026940 ENSSTUG00000026926 hdac3 (ENSSTUG00000026895) ENSSTUG00000026890 ENSSTUG00000026880 hspa9 (ENSSTUG00000026641) fgfrl1b (ENSSTUG00000026623) #22 csnk1a1 (ENSSTUG00000026284) ENSSTUG00000026257 SIL1 (ENSSTUG00000015948) HNRNPA0 (ENSSTUG00000015893) HNRNPA0 (ENSSTUG00000015884) ENSSTUG00000015880 KLHL3 (ENSSTUG00000015762) fam13b (ENSSTUG00000015516) cxcl14 (ENSSTUG00000015479) ENSSTUG00000015470 slit3 (ENSSTUG00000013247) ENSSTUG00000013184 ARHGEF37 (ENSSTUG00000013119) ENSSTUG00000013096 pde6a (ENSSTUG00000012475) ##11 Atlantic salmon MODERN SPECIES 28 ids (ENSSSAG00000106445) ENSSSAG00000084630 zgc:66433 (ENSSSAG00000057295) ENSSSAG00000057147 commd5 (ENSSSAG00000057116) ENSSSAG00000057087 fam199x (ENSSSAG00000108796) ENSSSAG00000104195 ENSSSAG00000057079 ENSSSAG00000053042 ENSSSAG00000054712 hdac3 (ENSSSAG00000054212) ENSSSAG00000111372 fchsd1 (ENSSSAG00000054146) GRP75 (ENSSSAG00000047778) ENSSSAG00000109848 #22 ENSSSAG00000047293 ENSSSAG00000091745 csnk1a1 (ENSSSAG00000047236) ENSSSAG00000047219 ENSSSAG00000105748 ENSSSAG00000108175 ENSSSAG00000112982 hnrnpa0l (ENSSSAG00000121827) ENSSSAG00000047146 ENSSSAG00000047284 fam13b (ENSSSAG00000045061) cxcl14 (ENSSSAG00000044980) ENSSSAG00000098992 slit3 (ENSSSAG00000041168) ARHGEF37 (ENSSSAG00000040862) Northern pike MODERN SPECIES 3 ENSELUG00000032255 AFF2 (ENSELUG00000013368) ids (ENSELUG00000013417) lyg2 (ENSELUG00000030629) zgc:66433 (ENSELUG00000013531) LONRF3 (ENSELUG00000013594) commd5 (ENSELUG00000013602) fam199x (ENSELUG00000013618) il1rapl2 (ENSELUG00000013734) ENSELUG00000013868 ENSELUG00000013931 hdac3 (ENSELUG00000013991) ENSELUG00000014038 ENSELUG00000014087 hspa9 (ENSELUG00000014148) fgfrl1b (ENSELUG00000014184) #22 FBXO38 (ENSELUG00000014216) csnk1a1 (ENSELUG00000014326) ENSELUG00000014358 ENSELUG00000014369 spdl1 (ENSELUG00000014382) ENSELUG00000014407 ENSELUG00000014398 KLHL3 (ENSELUG00000014442) fam13b (ENSELUG00000014560) cxcl14 (ENSELUG00000014628) slit3 (ENSELUG00000014761) ARHGEF37 (ENSELUG00000014865) ENSELUG00000014929 pde6a (ENSELUG00000015021) ##11 SLC26A2 (ENSELUG00000015049) ##20 Otomorpha ANCESTRAL SPECIES 362 ENSGT00440000033329.b.a.b ENSGT00390000013770 ENSGT00440000033895 ENSGT01090000260076.b.a ENSGT00950000183196.D.b ENSGT00940000159795 ENSGT00940000165542 ENSGT00940000160541 ENSGT00940000156736.d #22 ENSGT00390000013163 ENSGT00940000153700 ENSGT00940000153909.b ENSGT00940000178312 ENSGT00510000047951 ENSGT00940000154808.a.b ENSGT00940000167175 ENSGT00940000165646.B Otophysi ANCESTRAL SPECIES 238 ENSGT00420000029769.b ENSGT00940000156950.a ENSGT00940000156344.b ENSGT00940000158645 ENSGT00390000006394 ENSGT00940000160322 ENSGT00940000158578 ENSGT00940000163364 ENSGT00940000181162 ENSGT00940000156665.a ENSGT00730000111223 ENSGT00940000164379.e.a ENSGT00940000154194.c.a ENSGT00940000156944.a.b ENSGT00940000166427 ENSGT00940000156736.d #22 ENSGT01030000234530.a.f.a.a ENSGT01030000234530.a.f.a.b.a ENSGT00940000155353.b ENSGT00940000156892.a ENSGT00940000158417.a Characiphysae ANCESTRAL SPECIES 147 ENSGT00940000158645 ENSGT00390000006394 ENSGT00940000160322 ENSGT00940000158578 ENSGT00940000163364 ENSGT00940000181162 ENSGT00940000156665.a ENSGT00730000111223 ENSGT00940000164379.e.a ENSGT00940000154194.c.a ENSGT00940000156944.a.b ENSGT01030000234904 ENSGT00940000158277.b.a.b ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000156736.d #22 ENSGT00940000155353.b ENSGT00940000156892.a ENSGT00940000158417.a Channel catfish MODERN SPECIES 27 pdgfc (ENSIPUG00000003348) mrpl18 (ENSIPUG00000003341) ENSIPUG00000003295 tomm5 (ENSIPUG00000003275) grhpra (ENSIPUG00000003223) LINGO2 (ENSIPUG00000003219) gar1 (ENSIPUG00000003194) adh5 (ENSIPUG00000003169) eif4ea (ENSIPUG00000003156) adra1bb (ENSIPUG00000003153) ENSIPUG00000003144 PCDH10 (ENSIPUG00000003095) ENSIPUG00000003060 PCDH18 (ENSIPUG00000003024) Slc7a11 (ENSIPUG00000002978) FGFRL1 (ENSIPUG00000002959) #22 nitr13 (ENSIPUG00000002953) ENSIPUG00000002947 ENSIPUG00000002938 ENSIPUG00000019092 ENSIPUG00000019082 ENSIPUG00000019073 nitr13 (ENSIPUG00000019065) nitr13 (ENSIPUG00000019057) ENSIPUG00000019047 ENSIPUG00000019041 ENSIPUG00000019032 nitr13 (ENSIPUG00000019024) nitr13 (ENSIPUG00000019010) nitr13 (ENSIPUG00000018988) ENSIPUG00000018983 Characiphysae_b ANCESTRAL SPECIES 16 ENSGT00390000006394 ENSGT00940000160322 ENSGT00940000158578 ENSGT00940000163364 ENSGT00940000181162 ENSGT00940000156665.a ENSGT00730000111223 ENSGT00940000164379.e.a ENSGT00940000154194.c.a ENSGT00940000156944.a.b ENSGT01030000234904 ENSGT00940000158277.b.a.b ENSGT00940000156295.h ENSGT00940000177650 ENSGT00940000166427 ENSGT00940000156736.d #22 ENSGT00940000155353.b ENSGT00940000156892.a ENSGT00940000158417.a ENSGT00940000159595 ENSGT00940000154735.d.b ENSGT00940000163328.c ENSGT00940000165206.d ENSGT00940000158334 ENSGT00940000156901.A.d ENSGT00940000168499.c ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000155249.h ENSGT00940000154953.a ENSGT00440000037338 Characoidei ANCESTRAL SPECIES 56 ENSGT00940000156344.b ENSGT00940000158645 ENSGT00390000006394 ENSGT00940000160322 ENSGT00940000158578 ENSGT00940000163364 ENSGT00940000181162 ENSGT00940000156665.a ENSGT00730000111223 ENSGT00940000164379.e.a ENSGT00940000154194.c.a ENSGT01030000234904 ENSGT00940000158277.b.a.b ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000156736.d #22 ENSGT00940000155353.b ENSGT00940000156892.a ENSGT00940000158417.a ENSGT00940000159595 ENSGT00940000154735.d.b ENSGT00940000163328.c ENSGT00940000165206.d ENSGT00940000158334 ENSGT00940000156901.A.d ENSGT00940000168499.c ENSGT00390000002292.b ENSGT00940000159591 ENSGT00940000182486 ENSGT00940000155249.h ENSGT00940000154953.a Red-bellied piranha MODERN SPECIES 94 eif4ea (ENSPNAG00000011752) PCDH10 (ENSPNAG00000001907) pcdh18b (ENSPNAG00000011768) ENSPNAG00000001922 ENSPNAG00000011809 fgfrl1b (ENSPNAG00000001952) #22 hmgn6 (ENSPNAG00000001966) sh3bgrl (ENSPNAG00000011852) ENSPNAG00000001991 ENSPNAG00000011903 POU3F4 (ENSPNAG00000002004) rps6kal (ENSPNAG00000012021) hdx (ENSPNAG00000012094) ENSPNAG00000012171 APOOL (ENSPNAG00000012188) AGTR2 (ENSPNAG00000012191) SH2D1A (ENSPNAG00000012204) TENM1 (ENSPNAG00000005132) Mexicana tetra MODERN SPECIES 547 fgfrl1b (ENSAMXG00000040060) #22 ENSAMXG00000031509 ENSAMXG00000006521 ENSAMXG00000036771 ENSAMXG00000037046 Electric eel MODERN SPECIES 755 ENSEEEG00000014804 fgfrl1b (ENSEEEG00000014797) #22 Cyprinoidei ANCESTRAL SPECIES 31 ENSGT00940000159219.b ENSGT00390000008346 ENSGT00390000009327 ENSGT00940000158578 ENSGT00940000163364 ENSGT00940000181162 ENSGT00940000156665.a ENSGT00730000111223 ENSGT00940000164379.e.a ENSGT00940000154194.c.a ENSGT00940000156944.a.b ENSGT01030000234904 ENSGT00940000158277.a ENSGT00940000156295.h ENSGT00940000166427 ENSGT00940000156736.d #22 ENSGT01030000234530.a.f.a.a ENSGT01030000234530.a.f.a.b.a ENSGT00940000155353.b ENSGT00940000156892.a ENSGT00940000158417.a ENSGT00940000159092 ENSGT00500000044890.b ENSGT00940000153737.a ENSGT00940000158987 ENSGT00940000165729 ENSGT00390000003231.a ENSGT00940000161284 ENSGT00940000154325.a ENSGT00390000013235 ENSGT00940000153467.a.b Cyprininae ANCESTRAL SPECIES 265 ENSGT01030000234904 ENSGT00940000158277.a.c ENSGT00940000156295.h.a ENSGT00940000166427.d ENSGT00940000156295.h.b ENSGT00940000166427.c ENSGT00940000156736.d #22 ENSGT01030000234530.a.f.a.a.l ENSGT01030000234530.a.f.a.b.a ENSGT00940000155353.b.b ENSGT01030000234530.a.f.a.a.k ENSGT00940000155353.b.a.a ENSGT00940000156892.a.g ENSGT00940000158417.a.f ENSGT00940000159092.m ENSGT00500000044890.b.a ENSGT00940000153737.a.j ENSGT00940000158987.i ENSGT00940000165729.a ENSGT00390000003231.a.i ENSGT00940000161284.g ENSGT00940000158987.j Cyprininae_a DUPLICATION Cyprininae_a ANCESTRAL SPECIES 286 ENSGT00940000158277.a.c ENSGT00940000156295.h.a ENSGT00940000166427.d ENSGT00940000156736.d.c #22 ENSGT01030000234530.a.f.a.a.k ENSGT00940000155353.b.a.a ENSGT00940000156892.a.g ENSGT00940000158417.a.f ENSGT00940000159092.m ENSGT00500000044890.b.a ENSGT00940000153737.a.j ENSGT00940000158987.i ENSGT00940000165729.a ENSGT00390000003231.a.i ENSGT00940000161284.g ENSGT00390000013235.f ENSGT00940000153467.a.b.j ENSGT00390000001289.b.a.d ENSGT00940000160861.o Common carp reference MODERN SPECIES 20 BEND4 (ENSCCRG00000050578) shisa3 (ENSCCRG00000079663) ATP8A1 (ENSCCRG00000047630) GRXCR1 (ENSCCRG00000039025) slc30a9 (ENSCCRG00000045583) grhpra (ENSCCRG00000081963) ENSCCRG00000081979 ENSCCRG00000076279 gar1 (ENSCCRG00000081409) adh5 (ENSCCRG00000042995) adra1bb (ENSCCRG00000043054) eif4ea (ENSCCRG00000072212) pcdh10b (ENSCCRG00000007685) pcdh18b (ENSCCRG00000016363) ENSCCRG00000027023 fgfrl1b (ENSCCRG00000048617) #22 nitr13 (ENSCCRG00000048614) ENSCCRG00000048613 chrnb3b (ENSCCRG00000048599) ENSCCRG00000048610 ENSCCRG00000073639 tspan7 (ENSCCRG00000069656) mid1ip1l (ENSCCRG00000062801) ENSCCRG00000076464 cstf2 (ENSCCRG00000066582) nox1 (ENSCCRG00000043239) xkrx (ENSCCRG00000056912) arl13a (ENSCCRG00000048181) ENSCCRG00000048168 drp2 (ENSCCRG00000062292) taf7 (ENSCCRG00000001921) Golden-line barbel MODERN SPECIES 725 fgfrl1b (ENSSGRG00000024601) #22 ENSSGRG00000024597 chrnb3b (ENSSGRG00000024591) ENSSGRG00000024590 tspan7 (ENSSGRG00000024576) mid1ip1l (ENSSGRG00000024575) ENSSGRG00000024574 cstf2 (ENSSGRG00000024549) nox1 (ENSSGRG00000024198) xkrx (ENSSGRG00000024173) arl13a (ENSSGRG00000024170) arl13a (ENSSGRG00000024166) ENSSGRG00000023953 drp2 (ENSSGRG00000023918) ENSSGRG00000023908 taf7 (ENSSGRG00000023903) Cyprininae_a ANCESTRAL SPECIES 134 ENSGT00940000169825 ENSGT00940000161360.g.a ENSGT00940000157110.u ENSGT00940000159219.b.a ENSGT00390000008346.h ENSGT00390000009327 ENSGT00940000158578.g ENSGT00940000156665.a.a ENSGT00730000111223.o ENSGT00940000164379.e.a.c ENSGT00940000154194.c.a.i ENSGT00940000156944.a.b.c ENSGT00940000158277.a.d ENSGT00940000156295.h.b ENSGT00940000166427.c ENSGT00940000156736.d.d #22 ENSGT01030000234530.a.f.a.a.l ENSGT01030000234530.a.f.a.b.a ENSGT00940000155353.b.b ENSGT00940000156892.a.h ENSGT00940000158417.a.e ENSGT00940000159092.n ENSGT00500000044890.b.b ENSGT00940000153737.a.i ENSGT00940000158987.j ENSGT00940000165729.b ENSGT00390000003231.a.j ENSGT00940000161284.h ENSGT00940000154325.a ENSGT00390000013235.e ENSGT00940000153467.a.b.i Golden-line barbel MODERN SPECIES 166 pcdh18b (ENSSGRG00000053000) ENSSGRG00000052956 fgfrl1b (ENSSGRG00000052954) #22 nitr13 (ENSSGRG00000052953) ENSSGRG00000052952 ENSSGRG00000052951 chrnb3b (ENSSGRG00000052947) ENSSGRG00000052944 tspan7 (ENSSGRG00000052940) mid1ip1l (ENSSGRG00000052936) ENSSGRG00000052935 cstf2 (ENSSGRG00000052929) nox1 (ENSSGRG00000052928) xkrx (ENSSGRG00000052926) arl13a (ENSSGRG00000052924) tmem35 (ENSSGRG00000052922) CENPI (ENSSGRG00000052916) ENSSGRG00000052897 Goldfish DUPLICATION Goldfish MODERN SPECIES 5 ttc9c (ENSCARG00000025753) zgc:153018 (ENSCARG00000025815) sfxn5b (ENSCARG00000025852) ENSCARG00000026193 BEND4 (ENSCARG00000026197) SHISA3 (ENSCARG00000026209) ATP8A1 (ENSCARG00000026416) GRXCR1 (ENSCARG00000033589) slc30a9 (ENSCARG00000033726) ENSCARG00000035228 grhpra (ENSCARG00000035236) tomm5 (ENSCARG00000035288) LINGO2 (ENSCARG00000035295) ENSCARG00000035308 ENSCARG00000035327 fgfrl1b (ENSCARG00000035424) #22 nitr13 (ENSCARG00000035431) ENSCARG00000035447 chrnb3b (ENSCARG00000035457) ENSCARG00000035472 tspan7 (ENSCARG00000035485) mid1ip1l (ENSCARG00000035500) ENSCARG00000035512 cstf2 (ENSCARG00000035547) nox1 (ENSCARG00000035764) xkrx (ENSCARG00000037084) arl13a (ENSCARG00000037146) tmem35 (ENSCARG00000037211) CENPI (ENSCARG00000037290) drp2 (ENSCARG00000037929) ENSCARG00000039839 Goldfish MODERN SPECIES 2506 fgfrl1b (ENSCARG00000040455) #22 nitr13 (ENSCARG00000040443) ENSCARG00000040422 Zebrafish MODERN SPECIES 5 GRXCR1 (ENSDARG00000105434) slc30a9 (ENSDARG00000057272) zgc:195212 (ENSDARG00000075203) grhpra (ENSDARG00000068264) tomm5 (ENSDARG00000068265) si:dkey-109l4.3 (ENSDARG00000102753) LINGO2 (ENSDARG00000074535) gar1 (ENSDARG00000076526) adh5 (ENSDARG00000080010) eif4ea (ENSDARG00000077012) adra1bb (ENSDARG00000041173) pcdh10b (ENSDARG00000102824) ENSDARG00000114583 pcdh18b (ENSDARG00000052494) ENSDARG00000071384 fgfrl1b (ENSDARG00000052556) #22 nitr13 (ENSDARG00000036125) ENSDARG00000056018 chrnb3b (ENSDARG00000038508) ENSDARG00000021392 tspan7 (ENSDARG00000015759) mid1ip1l (ENSDARG00000018145) ENSDARG00000077912 cstf2 (ENSDARG00000090788) nox1 (ENSDARG00000087574) xkrx (ENSDARG00000044011) arl13a (ENSDARG00000052575) tmem35 (ENSDARG00000052567) CENPI (ENSDARG00000052565) drp2 (ENSDARG00000101419) ENSDARG00000098164 Clupeiformes ANCESTRAL SPECIES 200 ENSGT00940000156736.d #22 ENSGT00390000013163 ENSGT00940000153700 ENSGT01030000234957 ENSGT00940000153909.b ENSGT00510000047951 ENSGT00940000164685.b ENSGT00940000164374.B.c.b ENSGT00940000165332.A ENSGT00940000155608 ENSGT00940000163832 ENSGT00940000175691 ENSGT00940000153668.B ENSGT00940000156001.d ENSGT00390000003751.b ENSGT00940000162656 Denticle herring MODERN SPECIES 9 SH2D1A (ENSDCDG00000035064) AGTR2 (ENSDCDG00000035066) APOOL (ENSDCDG00000035069) ENSDCDG00000035093 hdx (ENSDCDG00000035133) rps6kal (ENSDCDG00000019069) POU3F4 (ENSDCDG00000026384) ENSDCDG00000026387 ENSDCDG00000026389 nsdhl (ENSDCDG00000026400) CETN1 (ENSDCDG00000026402) gcna (ENSDCDG00000026407) mcts1 (ENSDCDG00000026409) c1galt1c1 (ENSDCDG00000026410) ENSDCDG00000026416 fgfrl1b (ENSDCDG00000026418) #22 FBXO38 (ENSDCDG00000026428) csnk1a1 (ENSDCDG00000026463) ENSDCDG00000026488 ENSDCDG00000026489 ENSDCDG00000026492 SIL1 (ENSDCDG00000026494) spdl1 (ENSDCDG00000026501) ENSDCDG00000026572 ENSDCDG00000026577 ENSDCDG00000026627 CHRM1 (ENSDCDG00000026629) pola2 (ENSDCDG00000026640) ENSDCDG00000027304 ENSDCDG00000027305 TENM2 (ENSDCDG00000027366) Atlantic herring DUPLICATION Atlantic herring MODERN SPECIES 5 ENSCHAG00000005281 btbd6a (ENSCHAG00000005318) ENSCHAG00000005344 klc1a (ENSCHAG00000005605) coa8 (ENSCHAG00000005829) bag5 (ENSCHAG00000005843) trmt61a (ENSCHAG00000005873) ENSCHAG00000005913 exoc3l4 (ENSCHAG00000005985) ENSCHAG00000006002 EIF5 (ENSCHAG00000006019) zfyve28 (ENSCHAG00000006122) ENSCHAG00000006316 ENSCHAG00000006324 gpr37b (ENSCHAG00000006415) ENSCHAG00000006438 #22 ENSCHAG00000006446 mrpl35 (ENSCHAG00000006470) ENSCHAG00000006481 ENSCHAG00000006573 plk4 (ENSCHAG00000008608) isca2 (ENSCHAG00000002383) npc2.1 (ENSCHAG00000002481) gskip (ENSCHAG00000002506) ENSCHAG00000002630 ENSCHAG00000003392 ENSCHAG00000003440 ENSCHAG00000003460 ENSCHAG00000003494 ENSCHAG00000003619 ENSCHAG00000003634 Atlantic herring MODERN SPECIES 12 maea (ENSCHAG00000012183) #26 uvssa (ENSCHAG00000012252) nkx1.2lb (ENSCHAG00000012264) #28 ENSCHAG00000012281 ENSCHAG00000012296 ENSCHAG00000012311 ENSCHAG00000012362 ENSCHAG00000012390 ENSCHAG00000012410 rnf111 (ENSCHAG00000012427) ccnb2 (ENSCHAG00000012731) MYO1E (ENSCHAG00000012807) ENSCHAG00000012906 ENSCHAG00000012914 ENSCHAG00000012926 fgfrl1b (ENSCHAG00000012943) #22 FBXO38 (ENSCHAG00000013026) csnk1a1 (ENSCHAG00000013177) ENSCHAG00000013324 ENSCHAG00000013344 SIL1 (ENSCHAG00000013374) spdl1 (ENSCHAG00000013386) ENSCHAG00000013478 ENSCHAG00000013489 ENSCHAG00000013680 ENSCHAG00000013699 mif (ENSCHAG00000013705) ENSCHAG00000013723 ENSCHAG00000013753 ENSCHAG00000013774 clp1 (ENSCHAG00000000474) Osteoglossiformes ANCESTRAL SPECIES 257 ENSGT00390000010318.xb ENSGT00940000156736 #22 ENSGT00740000115581.f #23 ENSGT00940000160999 ENSGT00940000159900 #24 ENSGT00940000157061.a #25 ENSGT00940000153203.B #26 ENSGT00940000164256 ENSGT00940000162861 #28 ENSGT00530000063371.A #29 ENSGT00390000009871 ENSGT00390000008738 #30 ENSGT00390000013284 #32 ENSGT00390000014635 ENSGT00530000063854 ENSGT00940000153203.A.b ##26 ENSGT00390000006413 P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 50 ENSPKIG00000021287 DIAPH2 (ENSPKIG00000021238) glra4a (ENSPKIG00000021211) gla (ENSPKIG00000021176) ENSPKIG00000021146 BTK (ENSPKIG00000021084) ENSPKIG00000021053 il1rapl2 (ENSPKIG00000020978) ENSPKIG00000020815 ENSPKIG00000020749 HDAC3 (ENSPKIG00000020703) rell2 (ENSPKIG00000020688) ENSPKIG00000020656 ENSPKIG00000020631 hspa9 (ENSPKIG00000020567) fgfrl1b (ENSPKIG00000020528) #22 FBXO38 (ENSPKIG00000020462) csnk1a1 (ENSPKIG00000020391) ENSPKIG00000020372 SIL1 (ENSPKIG00000020342) spdl1 (ENSPKIG00000020315) ENSPKIG00000020290 HNRNPA0 (ENSPKIG00000020281) HNRNPA0 (ENSPKIG00000020270) KLHL3 (ENSPKIG00000020218) FAM13B (ENSPKIG00000020108) cxcl14 (ENSPKIG00000020045) slit3 (ENSPKIG00000019877) ARHGEF37 (ENSPKIG00000019789) ENSPKIG00000019743 pde6a (ENSPKIG00000019686) ##11 P. kingsleyae MODERN SPECIES 61 ENSPKIG00000007262 ENSPKIG00000007221 mmp14a (ENSPKIG00000007150) mrpl52 (ENSPKIG00000007085) AJUBA (ENSPKIG00000007050) acin1b (ENSPKIG00000006917) efs (ENSPKIG00000006817) ENSPKIG00000006780 ENSPKIG00000006746 rnf4 (ENSPKIG00000006722) fgfrl1a (ENSPKIG00000006697) #22 ENSPKIG00000006667 #23 ENSPKIG00000006651 spon2b (ENSPKIG00000006623) #24 ENSPKIG00000006601 zgc:136929 (ENSPKIG00000006506) #25 maea (ENSPKIG00000006400) #26 uvssa (ENSPKIG00000006302) nkx1.2lb (ENSPKIG00000006255) #28 ENSPKIG00000006215 slbp (ENSPKIG00000006183) #30 tmem129 (ENSPKIG00000006074) #32 abhd18 (ENSPKIG00000006009) mfsd8 (ENSPKIG00000005958) ENSPKIG00000005919 ##26 ENSPKIG00000005908 Asian bonytongue DUPLICATION Asian bonytongue MODERN SPECIES 4 ENSSFOG00015001824 tmem216 (ENSSFOG00015001846) ENSSFOG00015025339 thoc3 (ENSSFOG00015001867) cplx2 (ENSSFOG00015001898) ##16 slc25a48 (ENSSFOG00015001917) glra1 (ENSSFOG00015033192) g3bp1 (ENSSFOG00015001993) sparc (ENSSFOG00015002054) atox1 (ENSSFOG00015032700) SLC36A1 (ENSSFOG00015030401) mtnr1al (ENSSFOG00015002133) FAT2 (ENSSFOG00015002166) gm2a (ENSSFOG00015002248) hspa9 (ENSSFOG00015002266) fgfrl1b (ENSSFOG00015002361) #22 FBXO38 (ENSSFOG00015002400) csnk1a1 (ENSSFOG00015002502) ENSSFOG00015002569 ENSSFOG00015027544 spdl1 (ENSSFOG00015002583) HNRNPA0 (ENSSFOG00015029213) HNRNPA0 (ENSSFOG00015025597) KLHL3 (ENSSFOG00015002683) FAM13B (ENSSFOG00015002807) cxcl14 (ENSSFOG00015027067) slit3 (ENSSFOG00015002876) ARHGEF37 (ENSSFOG00015003000) ENSSFOG00015024285 pde6a (ENSSFOG00015003096) ##11 SLC26A2 (ENSSFOG00015026230) ##20 Asian bonytongue MODERN SPECIES SLC4A11 (ENSSFOG00015018690) ENSSFOG00015018852 dnaaf9 (ENSSFOG00015018879) ATRN (ENSSFOG00015018905) gfra4a (ENSSFOG00015018969) cactin (ENSSFOG00015018985) CDC25B (ENSSFOG00015019012) ENSSFOG00015019027 ENSSFOG00015031121 smyd5 (ENSSFOG00015019050) noto (ENSSFOG00015019115) sfxn5b (ENSSFOG00015019125) ENSSFOG00015019157 ENSSFOG00015019165 rnf4 (ENSSFOG00015019175) fgfrl1a (ENSSFOG00015019205) #22 ENSSFOG00015019221 #23 ENSSFOG00015019238 spon2b (ENSSFOG00015019258) #24 zgc:136929 (ENSSFOG00015019269) #25 maea (ENSSFOG00015019307) #26 uvssa (ENSSFOG00015019349) nkx1.2lb (ENSSFOG00015029833) #28 FAM53A (ENSSFOG00015024335) #29 ENSSFOG00015019400 slbp (ENSSFOG00015019429) #30 tmem129 (ENSSFOG00015019440) #32 abhd18 (ENSSFOG00015019459) mfsd8 (ENSSFOG00015019518) RMND5A (ENSSFOG00015019551) ##26 rnf103 (ENSSFOG00015019579) Spotted gar DUPLICATION Spotted gar MODERN SPECIES 672 prelid1a (ENSLOCG00000011987) npy7r (ENSLOCG00000018314) ENSLOCG00000011993 ENSLOCG00000012005 flt4 (ENSLOCG00000012009) ergic1 (ENSLOCG00000012027) dusp1 (ENSLOCG00000012031) neurl1b (ENSLOCG00000012037) spink2.1 (ENSLOCG00000012042) ENSLOCG00000018315 ENSLOCG00000012048 HDAC3 (ENSLOCG00000012055) ENSLOCG00000012060 FCHSD1 (ENSLOCG00000012072) hspa9 (ENSLOCG00000012077) fgfrl1b (ENSLOCG00000012085) #22 FBXO38 (ENSLOCG00000012089) csnk1a1 (ENSLOCG00000012101) SIL1 (ENSLOCG00000012109) spdl1 (ENSLOCG00000012111) ENSLOCG00000012121 KLHL3 (ENSLOCG00000012130) rmnd5b (ENSLOCG00000012143) ##26 N4BP3 (ENSLOCG00000012151) emx3 (ENSLOCG00000012156) b4galt7 (ENSLOCG00000012160) tmed9 (ENSLOCG00000012165) lman2 (ENSLOCG00000012170) HTR4 (ENSLOCG00000012176) SLC26A2 (ENSLOCG00000012182) ##20 pde6a (ENSLOCG00000012187) ##11 Spotted gar MODERN SPECIES 670 abhd18 (ENSLOCG00000010714) plk4 (ENSLOCG00000010729) ENSLOCG00000010748 HSPA4L (ENSLOCG00000010767) RMND5A (ENSLOCG00000010794) ##26 rnf103 (ENSLOCG00000010801) chmp3 (ENSLOCG00000010813) KDM3A (ENSLOCG00000010817) REEP1 (ENSLOCG00000010840) mrpl35 (ENSLOCG00000010848) immt (ENSLOCG00000010858) ptcd3 (ENSLOCG00000010871) POLR1A (ENSLOCG00000010881) st3gal5 (ENSLOCG00000010912) atoh8 (ENSLOCG00000010919) fgfrl1a (ENSLOCG00000010933) #22 ENSLOCG00000010940 #23 ENSLOCG00000010948 spon2b (ENSLOCG00000010961) #24 zgc:136929 (ENSLOCG00000010970) #25 maea (ENSLOCG00000010983) #26 uvssa (ENSLOCG00000010991) nkx1.2lb (ENSLOCG00000010999) #28 FAM53A (ENSLOCG00000011011) #29 ENSLOCG00000011017 slbp (ENSLOCG00000011027) #30 tmem129 (ENSLOCG00000011038) #32 slc24a2 (ENSLOCG00000011046) ENSLOCG00000011059 frem1a (ENSLOCG00000011064) ACO1 (ENSLOCG00000011082) Reedfish DUPLICATION Reedfish MODERN SPECIES 2 lman2 (ENSECRG00000009839) tmed9 (ENSECRG00000009714) b4galt7 (ENSECRG00000009680) ENSECRG00000009670 emx3 (ENSECRG00000009661) N4BP3 (ENSECRG00000009649) rmnd5b (ENSECRG00000009617) ##26 rab24 (ENSECRG00000009598) ENSECRG00000009557 fgfr4 (ENSECRG00000009520) znf346 (ENSECRG00000009498) ENSECRG00000009454 ENSECRG00000009433 ENSECRG00000009421 hspa9 (ENSECRG00000009389) fgfrl1b (ENSECRG00000009370) #22 ENSECRG00000009363 ENSECRG00000009355 LARP1 (ENSECRG00000009336) faxdc2 (ENSECRG00000009315) ENSECRG00000009303 TIFAB (ENSECRG00000009289) macroh2a1 (ENSECRG00000009250) ENSECRG00000009228 pitx1 (ENSECRG00000009211) PCBD2 (ENSECRG00000009198) txndc15 (ENSECRG00000009192) zgc:77058 (ENSECRG00000009183) camlg (ENSECRG00000009178) ENSECRG00000009090 SEC24A (ENSECRG00000009037) Reedfish MODERN SPECIES 13 pdcd4a (ENSECRG00000017672) ENSECRG00000017735 zgc:171579 (ENSECRG00000017751) RMND5A (ENSECRG00000017771) ##26 rnf103 (ENSECRG00000017801) chmp3 (ENSECRG00000017827) KDM3A (ENSECRG00000017852) REEP1 (ENSECRG00000017921) immt (ENSECRG00000017965) ptcd3 (ENSECRG00000018072) POLR1A (ENSECRG00000018194) ENSECRG00000018275 st3gal5 (ENSECRG00000018299) atoh8 (ENSECRG00000018315) ENSECRG00000018332 fgfrl1a (ENSECRG00000018377) #22 ENSECRG00000018416 spon2b (ENSECRG00000018430) #24 zgc:136929 (ENSECRG00000018480) #25 maea (ENSECRG00000018532) #26 uvssa (ENSECRG00000018560) nkx1.2lb (ENSECRG00000018615) #28 FAM53A (ENSECRG00000018641) #29 ENSECRG00000018664 slbp (ENSECRG00000018696) #30 tmem129 (ENSECRG00000018728) #32 TACC3 (ENSECRG00000018753) #31 mrpl35 (ENSECRG00000018790) FGFR3 (ENSECRG00000018877) #33 ENSECRG00000019343 ##34 ENSECRG00000019492 #35 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1504 tcerg1a (ENSCMIG00000019669) ENSCMIG00000019660 ENSCMIG00000019657 ENSCMIG00000019649 STK32A (ENSCMIG00000019640) ENSCMIG00000019599 ENSCMIG00000019567 JAKMIP2 (ENSCMIG00000019564) ENSCMIG00000019561 ENSCMIG00000019560 adra2da (ENSCMIG00000019559) hspa9 (ENSCMIG00000019528) SIL1 (ENSCMIG00000019516) slit3 (ENSCMIG00000019490) ENSCMIG00000019481 fgfrl1b (ENSCMIG00000019475) #22 tmed9 (ENSCMIG00000019472) ENSCMIG00000019469 #24 ctbp1 (ENSCMIG00000019454) ##25 fam53c (ENSCMIG00000019448) ##29 ENSCMIG00000019446 ENSCMIG00000019445 ENSCMIG00000019440 cdc23 (ENSCMIG00000019425) KIF20A (ENSCMIG00000019406) ENSCMIG00000019401 ENSCMIG00000019398 ENSCMIG00000019368 ENSCMIG00000019353 MATR3 (ENSCMIG00000019350) reep2 (ENSCMIG00000019343) Elephant shark MODERN SPECIES 1544 DDRGK1 (ENSCMIG00000011854) ENSCMIG00000011851 ENSCMIG00000011849 ENSCMIG00000011844 RMND5A (ENSCMIG00000011843) ##26 rnf103 (ENSCMIG00000011840) chmp3 (ENSCMIG00000011837) ENSCMIG00000011750 ENSCMIG00000011725 ENSCMIG00000011719 mrpl35 (ENSCMIG00000011715) immt (ENSCMIG00000011590) ptcd3 (ENSCMIG00000011500) POLR1A (ENSCMIG00000010999) st3gal5 (ENSCMIG00000010848) fgfrl1a (ENSCMIG00000010821) #22 ENSCMIG00000010814 #23 ENSCMIG00000010810 spon2b (ENSCMIG00000010807) #24 zgc:136929 (ENSCMIG00000010457) #25 maea (ENSCMIG00000010360) #26 ENSCMIG00000010357 FAM53A (ENSCMIG00000010345) #29 ENSCMIG00000010343 ENSCMIG00000010340 #30 tmem129 (ENSCMIG00000010338) #32 ENSCMIG00000010335 #31 fgfr3 (ENSCMIG00000008720) #33 ENSCMIG00000008401 Cyclostomata DUPLICATION Cyclostomata DUPLICATION Cyclostomata ANCESTRAL SPECIES 567 ENSGT00940000156736.a.a #22 ENSGT00940000157929 Lamprey MODERN SPECIES 942 FGFRL1 (ENSPMAG00000006079) #22 st3gal5 (ENSPMAG00000006098) Hagfish MODERN SPECIES 741 ENSEBUG00000013022 ENSEBUG00000000494 ENSEBUG00000002041 #22 ENSEBUG00000014600 lap3 (ENSEBUG00000002111) ENSEBUG00000015863 ENSEBUG00000015524 ndufaf7 (ENSEBUG00000011604) ENSEBUG00000006313 fkbp2 (ENSEBUG00000005002) ENSEBUG00000013089 ENSEBUG00000013109 ENSEBUG00000000669 ENSEBUG00000006697 ENSEBUG00000009480 Cyclostomata ANCESTRAL SPECIES ENSGT00940000156736.a.b #22 Lamprey MODERN SPECIES 494 ENSPMAG00000001743 #22 tmed4 (ENSPMAG00000001745) ykt6 (ENSPMAG00000001754) Hagfish MODERN SPECIES 1486 ENSEBUG00000004216 #22 ENSEBUG00000000900 #22 npy2rl (ENSEBUG00000006764) Cyclostomata ANCESTRAL SPECIES ENSGT00940000156736.b #22 Hagfish MODERN SPECIES 1486 npy2rl (ENSEBUG00000006764) ENSEBUG00000000900 #22 ENSEBUG00000004216 #22 Ciona ANCESTRAL SPECIES ENSGT00940000156736 #22 Ciona intestinalis MODERN SPECIES 9 ENSCING00000010139 ENSCING00000012278 ENSCING00000019555 ENSCING00000006270 ENSCING00000006291 ENSCING00000006296 ENSCING00000022449 ENSCING00000006307 ENSCING00000024991 ENSCING00000018533 ENSCING00000006321 ENSCING00000003734 ENSCING00000019276 ENSCING00000020127 ENSCING00000023736 ENSCING00000012281 #22 ENSCING00000018368 ENSCING00000018275 ENSCING00000003761 ENSCING00000024479 ENSCING00000019356 ENSCING00000003766 ENSCING00000003770 ENSCING00000003783 ENSCING00000003784 ENSCING00000003788 ENSCING00000012282 ENSCING00000024041 ENSCING00000003791 ENSCING00000020940 zf(bbox/ring)-4 (ENSCING00000003804) Ecdysozoa ANCESTRAL SPECIES ENSGT00940000156736 #22 Caenorhabditis elegans MODERN SPECIES 6 gpa-5 (WBGene00001667) swip-10 (WBGene00018738) bus-5 (WBGene00044621) F53B1.2 (WBGene00018735) F53B1.3 (WBGene00018736) T21D9.2 (WBGene00020645) col-164 (WBGene00000737) lsy-2 (WBGene00003087) F49H12.2 (WBGene00018653) F49H12.3 (WBGene00018654) F49H12.4 (WBGene00018655) txdc-12.2 (WBGene00018656) acl-4 (WBGene00018657) F49H12.7 (WBGene00044753) Y102A11A.1 (WBGene00022411) igcm-4 (WBGene00022418) #22 Y102A11A.7 (WBGene00022417) Y102A11A.6 (WBGene00022416) Y102A11A.5 (WBGene00022415) Y102A11A.2 (WBGene00022412) Y102A11A.3 (WBGene00022413) Y102A11A.9 (WBGene00022419) Y40A1A.3 (WBGene00021485) Y40A1A.2 (WBGene00021484) meg-3 (WBGene00001569) F52D2.12 (WBGene00219451) F52D2.6 (WBGene00018688) F52D2.5 (WBGene00018687) str-79 (WBGene00006139) F52D2.7 (WBGene00018689) rgs-8.1 (WBGene00004351) Fruitfly MODERN SPECIES 19 Burs (FBgn0038901) GABA-B-R2 (FBgn0027575) CG6800 (FBgn0038902) Polr1H (FBgn0038903) tsl (FBgn0003867) CASK (FBgn0013759) Gr93a (FBgn0041229) Gr93b (FBgn0045470) Gr93c (FBgn0045469) Gr93d (FBgn0045468) glec (FBgn0015229) lsn (FBgn0260940) CG6569 (FBgn0038909) Cby (FBgn0067317) CG31174 (FBgn0051174) CG31431 (FBgn0051431) #22 CG31178 (FBgn0064912) CG6656 (FBgn0038912) CG34148 (FBgn0083984) P5CDh2 (FBgn0053092) CG31465 (FBgn0051465) fit (FBgn0038914) CG17819 (FBgn0038915) dnd (FBgn0038916) CG6678 (FBgn0038917) CG43844 (FBgn0264426) Qsox3 (FBgn0038918) Qsox2 (FBgn0038919) Eip93F (FBgn0264490) Theg (FBgn0038921) Idh3b (FBgn0038922)