Euteleostomi	ANCESTRAL SPECIES	114	ENSGT00950000182825.A.a.a	ENSGT00390000016889	ENSGT00940000155199	ENSGT00940000154563	ENSGT00940000160784	ENSGT00940000160431	ENSGT00940000154102.a	ENSGT01050000244888.a.b	ENSGT00390000011228.a	ENSGT00940000162196	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a	ENSGT00940000159650	ENSGT00940000156194 #37	ENSGT00990000206767	ENSGT00940000157493	ENSGT00940000153792.B
Sarcopterygii	ANCESTRAL SPECIES	364													ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a	ENSGT00940000161251	ENSGT00390000000020.a
Tetrapoda	ANCESTRAL SPECIES	98	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000159117	ENSGT00940000177211	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a	ENSGT00940000161251	ENSGT00390000000020.a
Amniota	ANCESTRAL SPECIES	26	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000159117	ENSGT00940000177211	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00440000033504.C	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695	ENSGT00940000169569
Mammalia	ANCESTRAL SPECIES	41	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00730000111479	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000153189.C	ENSGT00940000156194 #37	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00940000153544.a #32
Theria	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a #11	ENSGT00390000008767.b ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000163908	ENSGT00390000000020.a
Eutheria	ANCESTRAL SPECIES	9	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00390000008767.b ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000163908
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00440000033504.C	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00440000033504.C	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C
Primates	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.a #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.kb #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Hominidae	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.a #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.kb #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.a #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.kb #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.a #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.kb #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Pan	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00950000183198.c.a.b.b	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.a #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.kb #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Bonobo	MODERN SPECIES	19	ZNF76 (ENSPPAG00000035130) #7	DEF6 (ENSPPAG00000033198) #8	PPARD (ENSPPAG00000038368) #9	ENSPPAG00000034967 #10	ENSPPAG00000011712 #11	TEAD3 (ENSPPAG00000015570) #12	TULP1 (ENSPPAG00000030610) #13	FKBP5 (ENSPPAG00000040163) #14	ARMC12 (ENSPPAG00000005870) #15	ENSPPAG00000031587 #16	CLPSL1 (ENSPPAG00000029511) #17	CLPS (ENSPPAG00000026942) #18	LHFPL5 (ENSPPAG00000030696) #19	SRPK1 (ENSPPAG00000029829) #20	SLC26A8 (ENSPPAG00000039258) #21	MAPK14 (ENSPPAG00000041878) #22	ENSPPAG00000042344 #23	MAPK13 (ENSPPAG00000037868) #24	BRPF3 (ENSPPAG00000040566) #25	PNPLA1 (ENSPPAG00000029022) #26	BNIP5 (ENSPPAG00000033922) #27	ENSPPAG00000043525 #28	ETV7 (ENSPPAG00000019920) #29	PXT1 (ENSPPAG00000036302) #30	KCTD20 (ENSPPAG00000031112) #31	STK38 (ENSPPAG00000039275) #32	SRSF3 (ENSPPAG00000037453) #33	ENSPPAG00000037939 #34	CDKN1A (ENSPPAG00000037644) #35	RAB44 (ENSPPAG00000043639) #36	CPNE5 (ENSPPAG00000007557) #37
Chimpanzee	MODERN SPECIES	19	DEF6 (ENSPTRG00000018081) #8	PPARD (ENSPTRG00000018082) #9	FANCE (ENSPTRG00000018084) #10	RPL10A (ENSPTRG00000018085) #11	TEAD3 (ENSPTRG00000018086) #12	TULP1 (ENSPTRG00000018087) #13	ENSPTRG00000049415	FKBP5 (ENSPTRG00000018088) #14	ARMC12 (ENSPTRG00000018089) #15	CLPSL2 (ENSPTRG00000024123) #16	CLPSL1 (ENSPTRG00000029713) #17	CLPS (ENSPTRG00000018092) #18	LHFPL5 (ENSPTRG00000049082) #19	SRPK1 (ENSPTRG00000018094) #20	SLC26A8 (ENSPTRG00000018095) #21	MAPK14 (ENSPTRG00000018097) #22	ENSPTRG00000047298 #23	MAPK13 (ENSPTRG00000018098) #24	BRPF3 (ENSPTRG00000024347) #25	PNPLA1 (ENSPTRG00000018100) #26	BNIP5 (ENSPTRG00000018101) #27	ENSPTRG00000052831 #28	ETV7 (ENSPTRG00000018102) #29	PXT1 (ENSPTRG00000018103) #30	KCTD20 (ENSPTRG00000018104) #31	STK38 (ENSPTRG00000018105) #32	SRSF3 (ENSPTRG00000018106) #33	ENSPTRG00000050938 #34	CDKN1A (ENSPTRG00000018107) #35	RAB44 (ENSPTRG00000045813) #36	CPNE5 (ENSPTRG00000018110) #37
Human	MODERN SPECIES	18	ZNF76 (ENSG00000065029) #7	DEF6 (ENSG00000023892) #8	PPARD (ENSG00000112033) #9	FANCE (ENSG00000112039) #10	RPL10A (ENSG00000198755) #11	TEAD3 (ENSG00000007866) #12	TULP1 (ENSG00000112041) #13	FKBP5 (ENSG00000096060) #14	ARMC12 (ENSG00000157343) #15	CLPSL2 (ENSG00000196748) #16	CLPSL1 (ENSG00000204140) #17	CLPS (ENSG00000137392) #18	LHFPL5 (ENSG00000197753) #19	SRPK1 (ENSG00000096063) #20	SLC26A8 (ENSG00000112053) #21	MAPK14 (ENSG00000112062) #22	MAPK13 (ENSG00000156711) #24	BRPF3 (ENSG00000096070) #25	PNPLA1 (ENSG00000180316) #26	BNIP5 (ENSG00000189325) #27	ETV7 (ENSG00000010030) #29	PXT1 (ENSG00000179165) #30	KCTD20 (ENSG00000112078) #31	STK38 (ENSG00000112079) #32	SRSF3 (ENSG00000112081) #33	CDKN1A (ENSG00000124762) #35	RAB44 (ENSG00000255587) #36	CPNE5 (ENSG00000124772) #37	PPIL1 (ENSG00000137168)	C6orf89 (ENSG00000198663)	PI16 (ENSG00000164530)
Gorilla	MODERN SPECIES	19	ZNF76 (ENSGGOG00000014188) #7	DEF6 (ENSGGOG00000016204) #8	PPARD (ENSGGOG00000016781) #9	RPL10A (ENSGGOG00000028140) #11	TEAD3 (ENSGGOG00000001847) #12	TULP1 (ENSGGOG00000001850) #13	ENSGGOG00000028262	FKBP5 (ENSGGOG00000005367) #14	ARMC12 (ENSGGOG00000015515) #15	ENSGGOG00000007944 #16	CLPSL1 (ENSGGOG00000007952) #17	CLPS (ENSGGOG00000005311) #18	LHFPL5 (ENSGGOG00000012128) #19	SRPK1 (ENSGGOG00000013566) #20	SLC26A8 (ENSGGOG00000013580) #21	MAPK14 (ENSGGOG00000040633) #22	ENSGGOG00000040328 #23	MAPK13 (ENSGGOG00000003947) #24	BRPF3 (ENSGGOG00000013411) #25	PNPLA1 (ENSGGOG00000007014) #26	BNIP5 (ENSGGOG00000007022) #27	ENSGGOG00000042754 #28	ETV7 (ENSGGOG00000002074) #29	PXT1 (ENSGGOG00000004176) #30	KCTD20 (ENSGGOG00000003468) #31	STK38 (ENSGGOG00000008755) #32	ENSGGOG00000017186 #33	ENSGGOG00000025194 #34	CDKN1A (ENSGGOG00000014701) #35	RAB44 (ENSGGOG00000005759) #36	CPNE5 (ENSGGOG00000005763) #37
Orangutan	MODERN SPECIES	19	DEF6 (ENSPPYG00000016526) #8	PPARD (ENSPPYG00000016527) #9	ENSPPYG00000016528 #10	RPL10A (ENSPPYG00000016529) #11	TEAD3 (ENSPPYG00000016530) #12	TULP1 (ENSPPYG00000016531) #13	ENSPPYG00000037354	FKBP5 (ENSPPYG00000016532) #14	ARMC12 (ENSPPYG00000016533) #15	ENSPPYG00000016534 #16	CLPSL1 (ENSPPYG00000016535) #17	CLPS (ENSPPYG00000016536) #18	LHFPL5 (ENSPPYG00000040753) #19	SRPK1 (ENSPPYG00000016537) #20	SLC26A8 (ENSPPYG00000016538) #21	MAPK14 (ENSPPYG00000016539) #22	MAPK13 (ENSPPYG00000016540) #24	BRPF3 (ENSPPYG00000016541) #25	PNPLA1 (ENSPPYG00000016542) #26	BNIP5 (ENSPPYG00000016543) #27	ETV7 (ENSPPYG00000016544) #29	PXT1 (ENSPPYG00000040789) #30	KCTD20 (ENSPPYG00000016546) #31	STK38 (ENSPPYG00000016547) #32	SRSF3 (ENSPPYG00000016548) #33	CDKN1A (ENSPPYG00000016549) #35	RAB44 (ENSPPYG00000037363) #36	CPNE5 (ENSPPYG00000016553) #37	PPIL1 (ENSPPYG00000016554)	C6H6orf89 (ENSPPYG00000016555)	PI16 (ENSPPYG00000016556)
Gibbon	MODERN SPECIES	10	SCUBE3 (ENSNLEG00000008527)	ENSNLEG00000008581 #7	DEF6 (ENSNLEG00000008604) #8	PPARD (ENSNLEG00000008621) #9	ENSNLEG00000008643 #10	RPL10A (ENSNLEG00000008650) #11	TEAD3 (ENSNLEG00000008666) #12	ENSNLEG00000008709 #13	FKBP5 (ENSNLEG00000008715) #14	ARMC12 (ENSNLEG00000008757) #15	CLPSL2 (ENSNLEG00000008771) #16	CLPSL1 (ENSNLEG00000032058) #17	CLPS (ENSNLEG00000008783) #18	SRPK1 (ENSNLEG00000008794) #20	SLC26A8 (ENSNLEG00000008819) #21	MAPK14 (ENSNLEG00000036033) #22	ENSNLEG00000036157 #23	MAPK13 (ENSNLEG00000008913) #24	BRPF3 (ENSNLEG00000008999) #25	ENSNLEG00000009037 #26	BNIP5 (ENSNLEG00000009064) #27	ENSNLEG00000011953	LRR1 (ENSNLEG00000011957)	ENSNLEG00000027347	DNAAF2 (ENSNLEG00000011975)	POLE2 (ENSNLEG00000011982)	KLHDC1 (ENSNLEG00000012044)	KLHDC2 (ENSNLEG00000012047)	NEMF (ENSNLEG00000012070)	ENSNLEG00000030067	ENSNLEG00000030933
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C
Rhinopithecus	ANCESTRAL SPECIES	31	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b.b ##20	ENSGT00940000155264.n ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Golden snub-nosed monkey	MODERN SPECIES	2750	DEF6 (ENSRROG00000042439) #8	PPARD (ENSRROG00000029175) #9	FANCE (ENSRROG00000032591) #10	RPL10A (ENSRROG00000028381) #11	TEAD3 (ENSRROG00000043776) #12	TULP1 (ENSRROG00000029720) #13	FKBP5 (ENSRROG00000043767) #14	ARMC12 (ENSRROG00000041434) #15	ENSRROG00000036180 #16	CLPSL1 (ENSRROG00000029400) #17	CLPS (ENSRROG00000033788) #18	LHFPL5 (ENSRROG00000037918) #19	ENSRROG00000029933 ##20	ENSRROG00000045645	SLC26A8 (ENSRROG00000031983) #21	MAPK14 (ENSRROG00000036549) #22	MAPK13 (ENSRROG00000042662) #24	BRPF3 (ENSRROG00000041528) #25	PNPLA1 (ENSRROG00000032219) #26	BNIP5 (ENSRROG00000039829) #27	ETV7 (ENSRROG00000032976) #29	PXT1 (ENSRROG00000039408) #30	KCTD20 (ENSRROG00000042618) #31	STK38 (ENSRROG00000034474) #32	SRSF3 (ENSRROG00000044486) #33	CDKN1A (ENSRROG00000037461) #35	RAB44 (ENSRROG00000037377) #36	CPNE5 (ENSRROG00000032021) #37	PPIL1 (ENSRROG00000045257)	C6orf89 (ENSRROG00000041913)	PI16 (ENSRROG00000032859)
Black snub-nosed monkey	MODERN SPECIES	306			PPARD (ENSRBIG00000041587) #9	FANCE (ENSRBIG00000044214) #10	RPL10A (ENSRBIG00000037569) #11	TEAD3 (ENSRBIG00000040718) #12	TULP1 (ENSRBIG00000041437) #13	FKBP5 (ENSRBIG00000018161) #14	ARMC12 (ENSRBIG00000029208) #15	ENSRBIG00000030153 #16	CLPSL1 (ENSRBIG00000039457) #17	CLPS (ENSRBIG00000028942) #18	LHFPL5 (ENSRBIG00000025941) #19	ENSRBIG00000036682 ##20	SLC26A8 (ENSRBIG00000036976) #21	MAPK14 (ENSRBIG00000037818) #22	MAPK13 (ENSRBIG00000040253) #24	BRPF3 (ENSRBIG00000029496) #25	PNPLA1 (ENSRBIG00000032695) #26	BNIP5 (ENSRBIG00000044492) #27	ETV7 (ENSRBIG00000041237) #29	PXT1 (ENSRBIG00000021930) #30	KCTD20 (ENSRBIG00000028139) #31	STK38 (ENSRBIG00000036049) #32	SRSF3 (ENSRBIG00000036836) #33	CDKN1A (ENSRBIG00000028286) #35	RAB44 (ENSRBIG00000018383) #36	CPNE5 (ENSRBIG00000038772) #37	PPIL1 (ENSRBIG00000024907)	C6orf89 (ENSRBIG00000032494)	PI16 (ENSRBIG00000039198)
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.nb #33	ENSGT00530000063255.B.l #34	ENSGT00910000144115.a.mb.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Vervet Monkey	MODERN SPECIES	8	DEF6 (ENSCSAG00000009963) #8	PPARD (ENSCSAG00000009967) #9	FANCE (ENSCSAG00000009968) #10	ENSCSAG00000009972 #11	TEAD3 (ENSCSAG00000009977) #12	TULP1 (ENSCSAG00000009987) #13	FKBP5 (ENSCSAG00000009994) #14	ARMC12 (ENSCSAG00000010008) #15	CLPSL2 (ENSCSAG00000010013) #16	CLPSL1 (ENSCSAG00000010016) #17	CLPS (ENSCSAG00000010019) #18	LHFPL5 (ENSCSAG00000010022) #19	ENSCSAG00000019304	ENSCSAG00000010090 ##20	SLC26A8 (ENSCSAG00000010164) #21	MAPK14 (ENSCSAG00000010178) #22	MAPK13 (ENSCSAG00000010185) #24	BRPF3 (ENSCSAG00000010191) #25	PNPLA1 (ENSCSAG00000010212) #26	BNIP5 (ENSCSAG00000010228) #27	ETV7 (ENSCSAG00000010241) #29	PXT1 (ENSCSAG00000010266) #30	KCTD20 (ENSCSAG00000010275) #31	STK38 (ENSCSAG00000010286) #32	SRSF3 (ENSCSAG00000010291) #33	CDKN1A (ENSCSAG00000010296) #35	ENSCSAG00000010304 #36	CPNE5 (ENSCSAG00000010340) #37	PPIL1 (ENSCSAG00000010353)	C6orf89 (ENSCSAG00000010357)	PI16 (ENSCSAG00000010367)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.mb.a #33	ENSGT00910000144115.a.nb #33	ENSGT00530000063255.B.l #34	ENSGT00910000144115.a.mb.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.mb.a #33	ENSGT00530000063255.B.l #34	ENSGT00910000144115.a.mb.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00910000147445 #28	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.mb.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT01100000263539.b.b.b.b.b.a.b.a.a.b.a.a.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C.`b.a	ENSGT00390000014270
Rhesus	MODERN SPECIES	14	SCUBE3 (ENSMMUG00000023557)	ZNF76 (ENSMMUG00000023559) #7	DEF6 (ENSMMUG00000023560) #8	PPARD (ENSMMUG00000015904) #9	FANCE (ENSMMUG00000015906) #10	RPL10A (ENSMMUG00000015907) #11	TEAD3 (ENSMMUG00000015909) #12	TULP1 (ENSMMUG00000005064) #13	FKBP5 (ENSMMUG00000011520) #14	ARMC12 (ENSMMUG00000059809) #15	CLPSL1 (ENSMMUG00000015383) #17	CLPS (ENSMMUG00000015384) #18	LHFPL5 (ENSMMUG00000063626) #19	SRPK1 (ENSMMUG00000018557) ##20	SLC26A8 (ENSMMUG00000008442) #21	MAPK14 (ENSMMUG00000008444) #22	MAPK13 (ENSMMUG00000005903) #24	BRPF3 (ENSMMUG00000015416) #25	PNPLA1 (ENSMMUG00000000685) #26	BNIP5 (ENSMMUG00000051919) #27	ETV7 (ENSMMUG00000000687) #29	KCTD20 (ENSMMUG00000014508) #31	STK38 (ENSMMUG00000020558) #32	ENSMMUG00000060923 #33	CDKN1A (ENSMMUG00000055964) #35	RAB44 (ENSMMUG00000003214) #36	ENSMMUG00000051501	ENSMMUG00000060681	CPNE5 (ENSMMUG00000005854) #37	PPIL1 (ENSMMUG00000056730)	C4H6orf89 (ENSMMUG00000005004)
Crab-eating macaque	MODERN SPECIES	14	ENSMFAG00000053098	PPARD (ENSMFAG00000036921) #9	FANCE (ENSMFAG00000029851) #10	ENSMFAG00000040600 #11	TEAD3 (ENSMFAG00000032267) #12	TULP1 (ENSMFAG00000002441) #13	ENSMFAG00000058661	ENSMFAG00000053351	ENSMFAG00000062629	FKBP5 (ENSMFAG00000030158) #14	ARMC12 (ENSMFAG00000038125) #15	ENSMFAG00000039538 #17	LHFPL5 (ENSMFAG00000003905) #19	ENSMFAG00000033486 ##20	SLC26A8 (ENSMFAG00000031229) #21	ENSMFAG00000037865 #22	ENSMFAG00000059871 #25	MAPK13 (ENSMFAG00000045766) #24	ENSMFAG00000000567 #25	PNPLA1 (ENSMFAG00000040598) #26	ENSMFAG00000010228 #28	BNIP5 (ENSMFAG00000046079) #27	ETV7 (ENSMFAG00000036120) #29	KCTD20 (ENSMFAG00000033116) #31	STK38 (ENSMFAG00000000825) #32	SRSF3 (ENSMFAG00000057460) #33	CDKN1A (ENSMFAG00000001604) #35	RAB44 (ENSMFAG00000000117) #36	ENSMFAG00000054102	CPNE5 (ENSMFAG00000039268) #37	PPIL1 (ENSMFAG00000046250)
Pig-tailed macaque	MODERN SPECIES	528	DEF6 (ENSMNEG00000044475) #8	ENSMNEG00000016032	PPARD (ENSMNEG00000042655) #9	FANCE (ENSMNEG00000038022) #10	RPL10A (ENSMNEG00000040176) #11	TEAD3 (ENSMNEG00000035473) #12	TULP1 (ENSMNEG00000038422) #13	FKBP5 (ENSMNEG00000044423) #14	ARMC12 (ENSMNEG00000041244) #15	CLPSL2 (ENSMNEG00000030010) #16	CLPSL1 (ENSMNEG00000030977) #17	CLPS (ENSMNEG00000032186) #18	LHFPL5 (ENSMNEG00000020411) #19	ENSMNEG00000035777 ##20	SLC26A8 (ENSMNEG00000037361) #21	MAPK14 (ENSMNEG00000045205) #22	MAPK13 (ENSMNEG00000040642) #24	BRPF3 (ENSMNEG00000044583) #25	PNPLA1 (ENSMNEG00000035187) #26	BNIP5 (ENSMNEG00000039042) #27	ENSMNEG00000028011 #28	ETV7 (ENSMNEG00000043750) #29	PXT1 (ENSMNEG00000045273) #30	KCTD20 (ENSMNEG00000041920) #31	STK38 (ENSMNEG00000029571) #32	SRSF3 (ENSMNEG00000038420) #33	ENSMNEG00000043837 #34	CDKN1A (ENSMNEG00000009631) #35	RAB44 (ENSMNEG00000007050) #36	CPNE5 (ENSMNEG00000033563) #37	ENSMNEG00000032074
Cercopithecinae_b	ANCESTRAL SPECIES	18	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.nb #33	ENSGT00530000063255.B.l #34	ENSGT00910000144115.a.mb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37
Cercopithecinae_d	ANCESTRAL SPECIES	13	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.m.b ##20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00910000147445 #28	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.nb #33	ENSGT00530000063255.B.l #34	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C.`b.a
Sooty mangabey	MODERN SPECIES	97	ZNF76 (ENSCATG00000004304) #7	DEF6 (ENSCATG00000043169) #8	PPARD (ENSCATG00000035831) #9	FANCE (ENSCATG00000034718) #10	RPL10A (ENSCATG00000028533) #11	TEAD3 (ENSCATG00000042257) #12	TULP1 (ENSCATG00000043702) #13	FKBP5 (ENSCATG00000023586) #14	ARMC12 (ENSCATG00000041800) #15	CLPSL2 (ENSCATG00000031441) #16	CLPSL1 (ENSCATG00000036639) #17	CLPS (ENSCATG00000035897) #18	LHFPL5 (ENSCATG00000038851) #19	ENSCATG00000013152 ##20	SLC26A8 (ENSCATG00000031110) #21	MAPK14 (ENSCATG00000041963) #22	MAPK13 (ENSCATG00000020471) #24	BRPF3 (ENSCATG00000009910) #25	PNPLA1 (ENSCATG00000030587) #26	ENSCATG00000000512 #28	BNIP5 (ENSCATG00000044674) #27	ETV7 (ENSCATG00000044285) #29	PXT1 (ENSCATG00000034765) #30	KCTD20 (ENSCATG00000035921) #31	STK38 (ENSCATG00000032229) #32	SRSF3 (ENSCATG00000031850) #33	ENSCATG00000045144 #34	CDKN1A (ENSCATG00000016602) #35	RAB44 (ENSCATG00000039932) #36	CPNE5 (ENSCATG00000044198) #37	ENSCATG00000025677
Drill	MODERN SPECIES	941	DEF6 (ENSMLEG00000039879) #8	PPARD (ENSMLEG00000039133) #9	FANCE (ENSMLEG00000029995) #10	RPL10A (ENSMLEG00000043266) #11	TEAD3 (ENSMLEG00000034526) #12	TULP1 (ENSMLEG00000036325) #13	FKBP5 (ENSMLEG00000042989) #14	ARMC12 (ENSMLEG00000037755) #15	CLPSL2 (ENSMLEG00000033601) #16	CLPSL1 (ENSMLEG00000041474) #17	CLPS (ENSMLEG00000011047) #18	ENSMLEG00000035814	LHFPL5 (ENSMLEG00000005788) #19	ENSMLEG00000041287 ##20	SLC26A8 (ENSMLEG00000032143) #21	MAPK14 (ENSMLEG00000043294) #22	MAPK13 (ENSMLEG00000040566) #24	BRPF3 (ENSMLEG00000024307) #25	PNPLA1 (ENSMLEG00000039225) #26	BNIP5 (ENSMLEG00000040000) #27	ENSMLEG00000022685 #28	ETV7 (ENSMLEG00000022479) #29	PXT1 (ENSMLEG00000010366) #30	KCTD20 (ENSMLEG00000031200) #31	STK38 (ENSMLEG00000030087) #32	SRSF3 (ENSMLEG00000041179) #33	ENSMLEG00000037519 #34	CDKN1A (ENSMLEG00000029996) #35	RAB44 (ENSMLEG00000034248) #36	CPNE5 (ENSMLEG00000040553) #37	PPIL1 (ENSMLEG00000043437)
Olive baboon	MODERN SPECIES	16	PPARD (ENSPANG00000016477) #9	FANCE (ENSPANG00000011154) #10	ENSPANG00000033155 #11	TEAD3 (ENSPANG00000018522) #12	TULP1 (ENSPANG00000010490) #13	FKBP5 (ENSPANG00000022113) #14	ENSPANG00000033276 #11	ARMC12 (ENSPANG00000022115) #15	CLPSL2 (ENSPANG00000050089) #16	CLPSL1 (ENSPANG00000047459) #17	CLPS (ENSPANG00000031296) #18	ENSPANG00000016189	LHFPL5 (ENSPANG00000046496) #19	ENSPANG00000000555 ##20	SLC26A8 (ENSPANG00000018480) #21	MAPK14 (ENSPANG00000018521) #22	MAPK13 (ENSPANG00000000909) #24	BRPF3 (ENSPANG00000000910) #25	PNPLA1 (ENSPANG00000016837) #26	BNIP5 (ENSPANG00000016838) #27	PXT1 (ENSPANG00000047657) #30	STK38 (ENSPANG00000015291) #32	KCTD20 (ENSPANG00000032159) #31	ENSPANG00000018768 #33	CDKN1A (ENSPANG00000041245) #35	RAB44 (ENSPANG00000006938) #36	CPNE5 (ENSPANG00000016476) #37	PPIL1 (ENSPANG00000016836)	C6orf89 (ENSPANG00000009718)	PI16 (ENSPANG00000021277)	MTCH1 (ENSPANG00000015101)
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000154045.a.j #23	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.ob.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Mas night monkey	MODERN SPECIES	1007	ZNF76 (ENSANAG00000036344) #7	DEF6 (ENSANAG00000037250) #8	PPARD (ENSANAG00000035545) #9	FANCE (ENSANAG00000027672) #10	RPL10A (ENSANAG00000034960) #11	TEAD3 (ENSANAG00000028458) #12	TULP1 (ENSANAG00000030313) #13	FKBP5 (ENSANAG00000030235) #14	ARMC12 (ENSANAG00000038298) #15	ENSANAG00000022845 #16	CLPSL1 (ENSANAG00000032715) #17	CLPS (ENSANAG00000033395) #18	LHFPL5 (ENSANAG00000035803) #19	SRPK1 (ENSANAG00000021431) #20	SLC26A8 (ENSANAG00000020781) #21	MAPK14 (ENSANAG00000038041) #22	ENSANAG00000032413 #23	MAPK13 (ENSANAG00000022181) #24	ENSANAG00000032262	BRPF3 (ENSANAG00000028984) #25	ENSANAG00000033497	PNPLA1 (ENSANAG00000034134) #26	BNIP5 (ENSANAG00000030362) #27	ETV7 (ENSANAG00000034107) #29	PXT1 (ENSANAG00000024752) #30	KCTD20 (ENSANAG00000026537) #31	ENSANAG00000024804 #32	ENSANAG00000033233 #33	CDKN1A (ENSANAG00000037294) #35	RAB44 (ENSANAG00000027844) #36
Cebidae	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.ob.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Marmoset	MODERN SPECIES	16	ENSCJAG00000082871	ENSCJAG00000075491	FANCE (ENSCJAG00000015623) #10	ENSCJAG00000042194 #11	TEAD3 (ENSCJAG00000015661) #12	TULP1 (ENSCJAG00000015713) #13	FKBP5 (ENSCJAG00000015725) #14	ARMC12 (ENSCJAG00000015745) #15	ENSCJAG00000015754 #16	CLPSL1 (ENSCJAG00000015756) #17	CLPS (ENSCJAG00000015758) #18	LHFPL5 (ENSCJAG00000060773) #19	SRPK1 (ENSCJAG00000015768) #20	SLC26A8 (ENSCJAG00000015817) #21	ENSCJAG00000074841	MAPK14 (ENSCJAG00000041232) #22	MAPK13 (ENSCJAG00000015899) #24	BRPF3 (ENSCJAG00000015955) #25	PNPLA1 (ENSCJAG00000015985) #26	BNIP5 (ENSCJAG00000016001) #27	ETV7 (ENSCJAG00000016011) #29	ENSCJAG00000043415	KCTD20 (ENSCJAG00000016033) #31	STK38 (ENSCJAG00000016045) #32	ENSCJAG00000016062 #33	CDKN1A (ENSCJAG00000045298) #35	RAB44 (ENSCJAG00000016070) #36	CPNE5 (ENSCJAG00000016086) #37	PPIL1 (ENSCJAG00000078975)	C6orf89 (ENSCJAG00000009979)	PI16 (ENSCJAG00000005267)
Cebidae_a	ANCESTRAL SPECIES	25	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.ob.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Bolivian squirrel monkey	MODERN SPECIES	49	ZNF76 (ENSSBOG00000030807) #7	DEF6 (ENSSBOG00000027933) #8	PPARD (ENSSBOG00000027821) #9	FANCE (ENSSBOG00000023245) #10	RPL10A (ENSSBOG00000027649) #11	TEAD3 (ENSSBOG00000022623) #12	TULP1 (ENSSBOG00000033656) #13	FKBP5 (ENSSBOG00000026900) #14	ARMC12 (ENSSBOG00000022270) #15	ENSSBOG00000027052 #16	CLPSL1 (ENSSBOG00000019532) #17	CLPS (ENSSBOG00000022101) #18	LHFPL5 (ENSSBOG00000027639) #19	SRPK1 (ENSSBOG00000034278) #20	SLC26A8 (ENSSBOG00000019666) #21	MAPK14 (ENSSBOG00000027800) #22	MAPK13 (ENSSBOG00000034607) #24	BRPF3 (ENSSBOG00000028254) #25	PNPLA1 (ENSSBOG00000020981) #26	BNIP5 (ENSSBOG00000020368) #27	ETV7 (ENSSBOG00000029790) #29	PXT1 (ENSSBOG00000001322) #30	KCTD20 (ENSSBOG00000021684) #31	STK38 (ENSSBOG00000027316) #32	SRSF3 (ENSSBOG00000022192) #33	CDKN1A (ENSSBOG00000019456) #35	RAB44 (ENSSBOG00000020854) #36	CPNE5 (ENSSBOG00000026861) #37	ENSSBOG00000028233	ENSSBOG00000032887	PI16 (ENSSBOG00000003322)
Capuchin	MODERN SPECIES	24	DEF6 (ENSCCAG00000032504) #8	ENSCCAG00000033879	PPARD (ENSCCAG00000034461) #9	FANCE (ENSCCAG00000034008) #10	ENSCCAG00000032525 #11	TEAD3 (ENSCCAG00000019451) #12	TULP1 (ENSCCAG00000022908) #13	FKBP5 (ENSCCAG00000028002) #14	ARMC12 (ENSCCAG00000030593) #15	ENSCCAG00000023416 #16	CLPSL1 (ENSCCAG00000023306) #17	CLPS (ENSCCAG00000024059) #18	LHFPL5 (ENSCCAG00000024048) #19	SRPK1 (ENSCCAG00000032894) #20	SLC26A8 (ENSCCAG00000025640) #21	MAPK14 (ENSCCAG00000030908) #22	MAPK13 (ENSCCAG00000026106) #24	BRPF3 (ENSCCAG00000023864) #25	PNPLA1 (ENSCCAG00000034985) #26	BNIP5 (ENSCCAG00000037372) #27	ETV7 (ENSCCAG00000024241) #29	PXT1 (ENSCCAG00000033640) #30	KCTD20 (ENSCCAG00000032892) #31	STK38 (ENSCCAG00000035966) #32	ENSCCAG00000032244 #33	ENSCCAG00000032362	ENSCCAG00000035899	CDKN1A (ENSCCAG00000025008) #35	RAB44 (ENSCCAG00000028656) #36	CPNE5 (ENSCCAG00000025295) #37	PPIL1 (ENSCCAG00000036358)
Tarsier	MODERN SPECIES	4958											ENSTSYG00000027490 #17	CLPS (ENSTSYG00000005087) #18	LHFPL5 (ENSTSYG00000035245) #19	SRPK1 (ENSTSYG00000002255) #20	SLC26A8 (ENSTSYG00000014401) #21	MAPK14 (ENSTSYG00000001163) #22	ENSTSYG00000037191	MAPK13 (ENSTSYG00000028506) #24
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Bushbaby	MODERN SPECIES	146	PPARD (ENSOGAG00000000630) #9	ENSOGAG00000024631	FANCE (ENSOGAG00000002939) #10	TEAD3 (ENSOGAG00000002943) #12	TULP1 (ENSOGAG00000029633) #13	FKBP5 (ENSOGAG00000016164) #14	ENSOGAG00000032836	ARMC12 (ENSOGAG00000025864) #15	CLPSL2 (ENSOGAG00000006388) #16	ENSOGAG00000009050	ENSOGAG00000024915	CLPS (ENSOGAG00000009742) #18	LHFPL5 (ENSOGAG00000009744) #19	SRPK1 (ENSOGAG00000009745) #20	SLC26A8 (ENSOGAG00000002813) #21	MAPK14 (ENSOGAG00000002814) #22	MAPK13 (ENSOGAG00000002816) #24	BRPF3 (ENSOGAG00000002560) #25	PNPLA1 (ENSOGAG00000017067) #26	BNIP5 (ENSOGAG00000031171) #27	ENSOGAG00000017069 #29	KCTD20 (ENSOGAG00000000496) #31	STK38 (ENSOGAG00000000500) #32	SRSF3 (ENSOGAG00000000502) #33	CDKN1A (ENSOGAG00000000504) #35	ENSOGAG00000026730 #36	CPNE5 (ENSOGAG00000002890) #37	PPIL1 (ENSOGAG00000011275)	ENSOGAG00000033182	C6orf89 (ENSOGAG00000011278)	PI16 (ENSOGAG00000003312)
Lemuriformes	DUPLICATION
Lemuriformes	DUPLICATION
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325.l #22	ENSGT00940000155325.k.a #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325.l #22	ENSGT00940000155325.k.a #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Greater bamboo lemur	MODERN SPECIES	1017				PPARD (ENSPSMG00000010451) #9	FANCE (ENSPSMG00000010471) #10	RPL10A (ENSPSMG00000010495) #11	TEAD3 (ENSPSMG00000010546) #12	TULP1 (ENSPSMG00000010619) #13	FKBP5 (ENSPSMG00000010666) #14	ARMC12 (ENSPSMG00000010708) #15	CLPSL2 (ENSPSMG00000010711) #16	CLPS (ENSPSMG00000010719) #18	LHFPL5 (ENSPSMG00000010729) #19	SRPK1 (ENSPSMG00000010786) #20	SLC26A8 (ENSPSMG00000010842) #21	MAPK14 (ENSPSMG00000010982) #22	MAPK13 (ENSPSMG00000011110) #24	BRPF3 (ENSPSMG00000011289) #25	PNPLA1 (ENSPSMG00000011357) #26	BNIP5 (ENSPSMG00000011364) #27	ETV7 (ENSPSMG00000011399) #29	PXT1 (ENSPSMG00000011413) #30	KCTD20 (ENSPSMG00000011447) #31	STK38 (ENSPSMG00000011478) #32	SRSF3 (ENSPSMG00000011516) #33	CDKN1A (ENSPSMG00000011534) #35	RAB44 (ENSPSMG00000011550) #36	CPNE5 (ENSPSMG00000011601) #37	PPIL1 (ENSPSMG00000011613)	ENSPSMG00000011620	C6orf89 (ENSPSMG00000011646)
Mouse lemur	MODERN SPECIES	28	ENSMICG00000009583	DEF6 (ENSMICG00000015541) #8	PPARD (ENSMICG00000000028) #9	FANCE (ENSMICG00000012463) #10	RPL10A (ENSMICG00000012458) #11	TULP1 (ENSMICG00000000029) #13	ENSMICG00000030220	FKBP5 (ENSMICG00000013310) #14	ARMC12 (ENSMICG00000035092) #15	ENSMICG00000041586 #16	CLPS (ENSMICG00000004205) #18	LHFPL5 (ENSMICG00000002689) #19	ENSMICG00000002693 #20	ENSMICG00000026992	SLC26A8 (ENSMICG00000043206) #21	ENSMICG00000008182 #22	MAPK13 (ENSMICG00000008188) #24	BRPF3 (ENSMICG00000001182) #25	PNPLA1 (ENSMICG00000011162) #26	BNIP5 (ENSMICG00000011173) #27	ETV7 (ENSMICG00000011184) #29	ENSMICG00000027106	KCTD20 (ENSMICG00000004661) #31	STK38 (ENSMICG00000035391) #32	ENSMICG00000029154 #33	CDKN1A (ENSMICG00000032440) #35	ENSMICG00000032903	CPNE5 (ENSMICG00000004691) #37	PPIL1 (ENSMICG00000035980)	C6orf89 (ENSMICG00000010562)	PI16 (ENSMICG00000045729)
Lemuriformes	ANCESTRAL SPECIES	28	ENSGT00940000160169	ENSGT00920000149143	ENSGT00940000161505	ENSGT00940000158191	ENSGT00950000183192.a.a	ENSGT00950000183195.b.a	ENSGT00390000011890	ENSGT00940000159456	ENSGT00390000010899.a.a	ENSGT00940000157229	ENSGT00390000007015	ENSGT00390000010770	ENSGT00940000156087	ENSGT00940000161537	ENSGT00390000016577	ENSGT00940000155325.k.b #22	ENSGT00390000007937	ENSGT00530000063737	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848	ENSGT00940000160477	ENSGT00390000011163.b	ENSGT00940000158908	ENSGT00940000156521.b	ENSGT00390000012412	ENSGT00940000154813	ENSGT00940000157501	ENSGT00940000159887	ENSGT00390000019941	ENSGT00940000154746
Mouse lemur	MODERN SPECIES	22	ENSMICG00000035625	ZFYVE26 (ENSMICG00000010864)	RDH12 (ENSMICG00000045730)	RDH11 (ENSMICG00000010848)	VTI1B (ENSMICG00000010843)	ARG2 (ENSMICG00000010837)	PIGH (ENSMICG00000010835)	PLEKHH1 (ENSMICG00000010820)	TMEM229B (ENSMICG00000047151)	PLEK2 (ENSMICG00000010804)	EIF2S1 (ENSMICG00000041438)	ATP6V1D (ENSMICG00000010784)	PALS1 (ENSMICG00000010772)	GARIN2 (ENSMICG00000010157)	GPHN (ENSMICG00000010139)	ENSMICG00000027570 #22	CCDC196 (ENSMICG00000043028)	FUT8 (ENSMICG00000038097)	ENSMICG00000036247	ENSMICG00000028175	MAX (ENSMICG00000035782)	FNTB (ENSMICG00000013108)	RAB15 (ENSMICG00000013101)	GPX2 (ENSMICG00000013100)	SPTB (ENSMICG00000013057)	PLEKHG3 (ENSMICG00000013046)	PPP1R36 (ENSMICG00000045325)	ZBTB1 (ENSMICG00000013035)	ZBTB25 (ENSMICG00000038249)	ENSMICG00000013011	ESR2 (ENSMICG00000013003)
Lemuriformes_a	ANCESTRAL SPECIES	11	ENSGT00940000160169	ENSGT00920000149143	ENSGT00940000161505	ENSGT00940000158191	ENSGT00950000183192.a.a	ENSGT00950000183195.b.a	ENSGT00390000011890	ENSGT00940000159456	ENSGT00390000010899.a.a	ENSGT00940000157229	ENSGT00390000007015	ENSGT00390000010770	ENSGT00940000156087	ENSGT00940000161537	ENSGT00390000016577	ENSGT00940000155325.k.b #22	ENSGT00390000007937	ENSGT00530000063737	ENSGT00530000064011	ENSGT00950000183128.C	ENSGT00940000157848	ENSGT00940000160477	ENSGT00390000011163.b	ENSGT00940000158908	ENSGT00940000156521.b	ENSGT00390000012412	ENSGT00940000154813	ENSGT00940000157501	ENSGT00940000159887	ENSGT00390000019941	ENSGT00940000154746
Coquerels sifaka	MODERN SPECIES	653	ZFYVE26 (ENSPCOG00000027084)	RDH12 (ENSPCOG00000026972)	RDH11 (ENSPCOG00000000069)	VTI1B (ENSPCOG00000016761)	ARG2 (ENSPCOG00000011282)	PIGH (ENSPCOG00000024082)	ENSPCOG00000028504	PLEKHH1 (ENSPCOG00000009458)	TMEM229B (ENSPCOG00000011841)	PLEK2 (ENSPCOG00000026522)	ENSPCOG00000018237	ATP6V1D (ENSPCOG00000027772)	PALS1 (ENSPCOG00000017167)	GARIN2 (ENSPCOG00000012364)	ENSPCOG00000018642	ENSPCOG00000016067 #22	GPHN (ENSPCOG00000024081)	CCDC196 (ENSPCOG00000024407)	FUT8 (ENSPCOG00000022479)	MAX (ENSPCOG00000023932)	RAB15 (ENSPCOG00000009241)	GPX2 (ENSPCOG00000027116)	FNTB (ENSPCOG00000016063)	ENSPCOG00000015741	SPTB (ENSPCOG00000011451)	PLEKHG3 (ENSPCOG00000023698)	PPP1R36 (ENSPCOG00000018068)	HSPA2 (ENSPCOG00000014814)	ZBTB1 (ENSPCOG00000025822)	ZBTB25 (ENSPCOG00000014549)	MTHFD1 (ENSPCOG00000002615)
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325.l #22	ENSGT00940000155325.k.a #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Mouse lemur	MODERN SPECIES	11															CEP350 (ENSMICG00000011196)	ENSMICG00000042219 #22	TOR1AIP1 (ENSMICG00000029943)	TOR1AIP2 (ENSMICG00000006150)	FAM163A (ENSMICG00000031528)	TDRD5 (ENSMICG00000017589)	NPHS2 (ENSMICG00000002674)	AXDND1 (ENSMICG00000002668)	ENSMICG00000028572	SOAT1 (ENSMICG00000005177)	ENSMICG00000028075	ENSMICG00000035049	ABL2 (ENSMICG00000003616)	TOR3A (ENSMICG00000004404)	FAM20B (ENSMICG00000043296)	ANGPTL1 (ENSMICG00000002492)	RALGPS2 (ENSMICG00000002482)
Lemuriformes_a	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325.l #22	ENSGT00940000155325.k.a #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Greater bamboo lemur	MODERN SPECIES	478	ZFYVE26 (ENSPSMG00000011576)	RDH12 (ENSPSMG00000011668)	RDH11 (ENSPSMG00000011747)	VTI1B (ENSPSMG00000011779)	ENSPSMG00000011793	ARG2 (ENSPSMG00000011814)	PIGH (ENSPSMG00000011846)	PLEKHH1 (ENSPSMG00000011876)	TMEM229B (ENSPSMG00000011889)	PLEK2 (ENSPSMG00000011920)	EIF2S1 (ENSPSMG00000011934)	ATP6V1D (ENSPSMG00000011992)	PALS1 (ENSPSMG00000012102)	GARIN2 (ENSPSMG00000012131)	GPHN (ENSPSMG00000012317)	ENSPSMG00000012442 #22	CCDC196 (ENSPSMG00000012467)	ENSPSMG00000012477	FUT8 (ENSPSMG00000012543)	ENSPSMG00000012712
Coquerels sifaka	MODERN SPECIES	356	DEF6 (ENSPCOG00000026130) #8	PPARD (ENSPCOG00000028127) #9	FANCE (ENSPCOG00000003132) #10	RPL10A (ENSPCOG00000023793) #11	TEAD3 (ENSPCOG00000021314) #12	TULP1 (ENSPCOG00000021849) #13	FKBP5 (ENSPCOG00000021003) #14	ARMC12 (ENSPCOG00000007300) #15	ENSPCOG00000018053 #16	ENSPCOG00000018489 #17	CLPS (ENSPCOG00000022003) #18	LHFPL5 (ENSPCOG00000020336) #19	SRPK1 (ENSPCOG00000001383) #20	SLC26A8 (ENSPCOG00000001683) #21	ENSPCOG00000023539	ENSPCOG00000020496 #22	MAPK13 (ENSPCOG00000027961) #24	BRPF3 (ENSPCOG00000020382) #25	PNPLA1 (ENSPCOG00000000768) #26	BNIP5 (ENSPCOG00000011314) #27	ENSPCOG00000016136 #29	ENSPCOG00000026073	KCTD20 (ENSPCOG00000027622) #31	STK38 (ENSPCOG00000008442) #32	SRSF3 (ENSPCOG00000026280) #33	RAB44 (ENSPCOG00000027072) #36	CPNE5 (ENSPCOG00000013003) #37	ENSPCOG00000020403	C6orf89 (ENSPCOG00000021297)	PI16 (ENSPCOG00000017925)	MTCH1 (ENSPCOG00000020934)
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00980000199407	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C
Tree shrew	MODERN SPECIES	430																MAPK14 (ENSTBEG00000005679) #22	ENSTBEG00000006283 #24
Glires	ANCESTRAL SPECIES	5	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00980000199407	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325 #22
Pika	MODERN SPECIES	260																ENSOPRG00000011622 #22	BRPF3 (ENSOPRG00000011639) #25
Rodentia	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Rodentia_B	ANCESTRAL SPECIES	8	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Myomorpha	ANCESTRAL SPECIES	11	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Muroidea	ANCESTRAL SPECIES	15	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Rat	MODERN SPECIES	12	Scube3 (ENSRNOG00000000500)	Zfp523 (ENSRNOG00000000501) #7	Def6 (ENSRNOG00000000502) #8	Ppard (ENSRNOG00000000503) #9	Fance (ENSRNOG00000000504) #10	Rpl10a (ENSRNOG00000000505) #11	Tead3 (ENSRNOG00000000506) #12	Tulp1 (ENSRNOG00000000507) #13	Fkbp5 (ENSRNOG00000022523) #14	Armc12 (ENSRNOG00000000508) #15	Clpsl2 (ENSRNOG00000038807) #16	Clps (ENSRNOG00000000510) #18	Lhfpl5 (ENSRNOG00000022283) #19	Srpk1 (ENSRNOG00000000511) #20	Slc26a8 (ENSRNOG00000000512) #21	Mapk14 (ENSRNOG00000000513) #22	Mapk13 (ENSRNOG00000000515) #24	Brpf3 (ENSRNOG00000028641) #25	ENSRNOG00000070267	Pnpla1 (ENSRNOG00000028622) #26	Bnip5 (ENSRNOG00000016997) #27	Pxt1 (ENSRNOG00000000516) #30	Kctd20 (ENSRNOG00000000517) #31	Stk38 (ENSRNOG00000000519) #32	Srsf3 (ENSRNOG00000000520) #33	Cdkn1a (ENSRNOG00000000521) #35	Rab44 (ENSRNOG00000001869) #36	Cpne5 (ENSRNOG00000000522) #37	Ppil1 (ENSRNOG00000000523)	RGD735065 (ENSRNOG00000000524)	Pi16 (ENSRNOG00000000525)
Mus	ANCESTRAL SPECIES	21	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.wb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Shrew mouse	MODERN SPECIES	13	Scube3 (MGP_PahariEiJ_G0023631)	Zfp523 (MGP_PahariEiJ_G0023632) #7	Def6 (MGP_PahariEiJ_G0023633) #8	Ppard (MGP_PahariEiJ_G0023634) #9	MGP_PahariEiJ_G0023635 #10	Rpl10a (MGP_PahariEiJ_G0023636) #11	Tead3 (MGP_PahariEiJ_G0023637) #12	Tulp1 (MGP_PahariEiJ_G0023638) #13	Fkbp5 (MGP_PahariEiJ_G0023639) #14	MGP_PahariEiJ_G0023640 #15	Clpsl2 (MGP_PahariEiJ_G0023641) #16	Clps (MGP_PahariEiJ_G0023642) #18	Lhfpl5 (MGP_PahariEiJ_G0023643) #19	Srpk1 (MGP_PahariEiJ_G0023644) #20	Slc26a8 (MGP_PahariEiJ_G0023645) #21	MGP_PahariEiJ_G0023646 #22	Mapk13 (MGP_PahariEiJ_G0023647) #24	Brpf3 (MGP_PahariEiJ_G0023648) #25	Pnpla1 (MGP_PahariEiJ_G0023649) #26	Bnip5 (MGP_PahariEiJ_G0023650) #27	MGP_PahariEiJ_G0023651 #30	Kctd20 (MGP_PahariEiJ_G0023652) #31	Stk38 (MGP_PahariEiJ_G0023653) #32	Srsf3 (MGP_PahariEiJ_G0023654) #33	Cdkn1a (MGP_PahariEiJ_G0023655) #35	MGP_PahariEiJ_G0023656 #36	Cpne5 (MGP_PahariEiJ_G0023657) #37	Ppil1 (MGP_PahariEiJ_G0023658)	BC004004 (MGP_PahariEiJ_G0023659)	Pi16 (MGP_PahariEiJ_G0023660)	Mtch1 (MGP_PahariEiJ_G0023661)
Mus_A	ANCESTRAL SPECIES	10	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.wb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Ryukyu mouse	MODERN SPECIES	8	Scube3 (MGP_CAROLIEiJ_G0021313)	Zfp523 (MGP_CAROLIEiJ_G0021314) #7	Def6 (MGP_CAROLIEiJ_G0021315) #8	Ppard (MGP_CAROLIEiJ_G0021316) #9	MGP_CAROLIEiJ_G0021317 #10	Rpl10a (MGP_CAROLIEiJ_G0021318) #11	Tead3 (MGP_CAROLIEiJ_G0021319) #12	Tulp1 (MGP_CAROLIEiJ_G0021320) #13	Fkbp5 (MGP_CAROLIEiJ_G0021321) #14	MGP_CAROLIEiJ_G0021322 #15	Clpsl2 (MGP_CAROLIEiJ_G0021323) #16	Clps (MGP_CAROLIEiJ_G0021324) #18	Lhfpl5 (MGP_CAROLIEiJ_G0021325) #19	Srpk1 (MGP_CAROLIEiJ_G0021326) #20	Slc26a8 (MGP_CAROLIEiJ_G0021327) #21	Mapk14 (MGP_CAROLIEiJ_G0021328) #22	Mapk13 (MGP_CAROLIEiJ_G0021329) #24	Brpf3 (MGP_CAROLIEiJ_G0021330) #25	Pnpla1 (MGP_CAROLIEiJ_G0021331) #26	Bnip5 (MGP_CAROLIEiJ_G0021332) #27	MGP_CAROLIEiJ_G0021333 #30	Kctd20 (MGP_CAROLIEiJ_G0021334) #31	Stk38 (MGP_CAROLIEiJ_G0021335) #32	Srsf3 (MGP_CAROLIEiJ_G0021336) #33	Cdkn1a (MGP_CAROLIEiJ_G0021337) #35	MGP_CAROLIEiJ_G0021338 #36	Cpne5 (MGP_CAROLIEiJ_G0021339) #37	Ppil1 (MGP_CAROLIEiJ_G0021340)	BC004004 (MGP_CAROLIEiJ_G0021341)	Pi16 (MGP_CAROLIEiJ_G0021342)	Mtch1 (MGP_CAROLIEiJ_G0021343)
Mus_B	ANCESTRAL SPECIES	9	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.wb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Mouse	MODERN SPECIES	8	Scube3 (ENSMUSG00000038677)	Zfp523 (ENSMUSG00000024220) #7	Def6 (ENSMUSG00000002257) #8	Ppard (ENSMUSG00000002250) #9	Fance (ENSMUSG00000007570) #10	Rpl10a (ENSMUSG00000037805) #11	Tead3 (ENSMUSG00000002249) #12	Tulp1 (ENSMUSG00000037446) #13	Fkbp5 (ENSMUSG00000024222) #14	Armc12 (ENSMUSG00000024223) #15	Clpsl2 (ENSMUSG00000024224) #16	Clps (ENSMUSG00000024225) #18	Lhfpl5 (ENSMUSG00000062252) #19	Srpk1 (ENSMUSG00000004865) #20	Slc26a8 (ENSMUSG00000036196) #21	Mapk14 (ENSMUSG00000053436) #22	Gng5c (ENSMUSG00000117145)	Mapk13 (ENSMUSG00000004864) #24	Brpf3 (ENSMUSG00000063952) #25	Pnpla1 (ENSMUSG00000043286) #26	Bnip5 (ENSMUSG00000048905) #27	Pxt1 (ENSMUSG00000045378) #30	Kctd20 (ENSMUSG00000005936) #31	Stk38 (ENSMUSG00000024006) #32	Srsf3 (ENSMUSG00000071172) #33	Cdkn1a (ENSMUSG00000023067) #35	Rab44 (ENSMUSG00000064147) #36	Cpne5 (ENSMUSG00000024008) #37	Ppil1 (ENSMUSG00000024007)	BC004004 (ENSMUSG00000052712)	Pi16 (ENSMUSG00000024011)
Mus_C	ANCESTRAL SPECIES	9	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.wb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Steppe mouse	MODERN SPECIES	3360	Scube3 (ENSMSIG00000007550)	Zfp523 (ENSMSIG00000007823) #7	Def6 (ENSMSIG00000007926) #8	ENSMSIG00000007962 #9	Fance (ENSMSIG00000008000) #10	Rpl10a (ENSMSIG00000008210) #11	Tead3 (ENSMSIG00000008386) #12	Tulp1 (ENSMSIG00000008568) #13	Fkbp5 (ENSMSIG00000008809) #14	Armc12 (ENSMSIG00000008938) #15	Clpsl2 (ENSMSIG00000009026) #16	Clps (ENSMSIG00000009048) #18	Lhfpl5 (ENSMSIG00000009063) #19	Srpk1 (ENSMSIG00000009089) #20	Slc26a8 (ENSMSIG00000009219) #21	Mapk14 (ENSMSIG00000009527) #22	Mapk13 (ENSMSIG00000009648) #24	Brpf3 (ENSMSIG00000009664) #25	Pnpla1 (ENSMSIG00000009903) #26	Bnip5 (ENSMSIG00000009932) #27	ENSMSIG00000009977 #30	Kctd20 (ENSMSIG00000009999) #31	Stk38 (ENSMSIG00000010088) #32	ENSMSIG00000010196 #33	Cdkn1a (ENSMSIG00000010224) #35	Rab44 (ENSMSIG00000010235) #36	Cpne5 (ENSMSIG00000010284) #37	Ppil1 (ENSMSIG00000010374)	BC004004 (ENSMSIG00000010390)	ENSMSIG00000010431	Mtch1 (ENSMSIG00000010448)
spretus	MODERN SPECIES	8	Scube3 (MGP_SPRETEiJ_G0022226)	Zfp523 (MGP_SPRETEiJ_G0022227) #7	Def6 (MGP_SPRETEiJ_G0022228) #8	MGP_SPRETEiJ_G0022229 #9	MGP_SPRETEiJ_G0022230 #10	Rpl10a (MGP_SPRETEiJ_G0022231) #11	Tead3 (MGP_SPRETEiJ_G0022232) #12	Tulp1 (MGP_SPRETEiJ_G0022233) #13	Fkbp5 (MGP_SPRETEiJ_G0022234) #14	Armc12 (MGP_SPRETEiJ_G0022235) #15	Clpsl2 (MGP_SPRETEiJ_G0022236) #16	Clps (MGP_SPRETEiJ_G0022237) #18	Lhfpl5 (MGP_SPRETEiJ_G0022238) #19	Srpk1 (MGP_SPRETEiJ_G0022239) #20	Slc26a8 (MGP_SPRETEiJ_G0022240) #21	Mapk14 (MGP_SPRETEiJ_G0022241) #22	Mapk13 (MGP_SPRETEiJ_G0022242) #24	Brpf3 (MGP_SPRETEiJ_G0022243) #25	Pnpla1 (MGP_SPRETEiJ_G0022244) #26	Bnip5 (MGP_SPRETEiJ_G0022245) #27	MGP_SPRETEiJ_G0022246 #30	Kctd20 (MGP_SPRETEiJ_G0022247) #31	Stk38 (MGP_SPRETEiJ_G0022248) #32	Cdkn1a (MGP_SPRETEiJ_G0022250) #35	MGP_SPRETEiJ_G0022251 #36	Cpne5 (MGP_SPRETEiJ_G0022252) #37	Ppil1 (MGP_SPRETEiJ_G0022253)	BC004004 (MGP_SPRETEiJ_G0022254)	Pi16 (MGP_SPRETEiJ_G0022255)	Mtch1 (MGP_SPRETEiJ_G0022256)	MGP_SPRETEiJ_G0022257
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.sb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.sb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a	ENSGT00940000161251
Golden Hamster	MODERN SPECIES	794	Scube3 (ENSMAUG00000008838)	Zfp523 (ENSMAUG00000001011) #7	Def6 (ENSMAUG00000012255) #8	Ppard (ENSMAUG00000004049) #9	ENSMAUG00000016572 #10	ENSMAUG00000020124 #11	Tead3 (ENSMAUG00000013377) #12	Tulp1 (ENSMAUG00000019588) #13	Fkbp5 (ENSMAUG00000019727) #14	Armc12 (ENSMAUG00000020880) #15	Clpsl2 (ENSMAUG00000009190) #16	Clps (ENSMAUG00000019258) #18	Lhfpl5 (ENSMAUG00000015982) #19	Srpk1 (ENSMAUG00000009015) #20	Slc26a8 (ENSMAUG00000017560) #21	Mapk14 (ENSMAUG00000015940) #22	Mapk13 (ENSMAUG00000017161) #24	ENSMAUG00000012176 #25	ENSMAUG00000003727 #25	Pnpla1 (ENSMAUG00000009123) #26	Bnip5 (ENSMAUG00000015521) #27	Kctd20 (ENSMAUG00000011835) #31	ENSMAUG00000019969 #32	ENSMAUG00000011512 #33	Cdkn1a (ENSMAUG00000000992) #35	Rab44 (ENSMAUG00000006085) #36	Cpne5 (ENSMAUG00000008415) #37	Ppil1 (ENSMAUG00000008428)	BC004004 (ENSMAUG00000009064)	Pi16 (ENSMAUG00000013039)	ENSMAUG00000014689
Chinese hamster chok1gshd	MODERN SPECIES	303	Scube3 (ENSCGRG00001016041)	Zfp523 (ENSCGRG00001020582) #7	Def6 (ENSCGRG00001000149) #8	Ppard (ENSCGRG00001010044) #9	ENSCGRG00001012736 #10	ENSCGRG00001023791 #11	Tead3 (ENSCGRG00001011025) #12	Tulp1 (ENSCGRG00001022823) #13	Fkbp5 (ENSCGRG00001018256) #14	Armc12 (ENSCGRG00001013411) #15	Clpsl2 (ENSCGRG00001018037) #16	Clps (ENSCGRG00001000490) #18	Lhfpl5 (ENSCGRG00001023708) #19	Srpk1 (ENSCGRG00001019530) #20	Slc26a8 (ENSCGRG00001011828) #21	Mapk14 (ENSCGRG00001021380) #22	Mapk13 (ENSCGRG00001020768) #24	Brpf3 (ENSCGRG00001005636) #25	Pnpla1 (ENSCGRG00001017390) #26	Bnip5 (ENSCGRG00001019118) #27
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.sb.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Prairie vole	MODERN SPECIES	352	Scube3 (ENSMOCG00000018773)	ENSMOCG00000013791 #7	Def6 (ENSMOCG00000012935) #8	Ppard (ENSMOCG00000021292) #9	ENSMOCG00000015462 #10	ENSMOCG00000005661 #11	Tead3 (ENSMOCG00000019095) #12	Tulp1 (ENSMOCG00000020188) #13	Fkbp5 (ENSMOCG00000015956) #14	Armc12 (ENSMOCG00000015055) #15	Clpsl2 (ENSMOCG00000014382) #16	Clps (ENSMOCG00000012155) #18	Lhfpl5 (ENSMOCG00000000453) #19	Srpk1 (ENSMOCG00000015538) #20	Slc26a8 (ENSMOCG00000013651) #21	Mapk14 (ENSMOCG00000003170) #22	Mapk13 (ENSMOCG00000002416) #24	Brpf3 (ENSMOCG00000000749) #25	Pnpla1 (ENSMOCG00000017432) #26	Bnip5 (ENSMOCG00000009438) #27	ENSMOCG00000001309	Kctd20 (ENSMOCG00000010354) #31	Stk38 (ENSMOCG00000006743) #32	ENSMOCG00000015471 #33	Cdkn1a (ENSMOCG00000020134) #35	Rab44 (ENSMOCG00000015106) #36	Cpne5 (ENSMOCG00000002894) #37	Ppil1 (ENSMOCG00000022982)	BC004004 (ENSMOCG00000021147)	Pi16 (ENSMOCG00000022919)	Mtch1 (ENSMOCG00000002184)
Northern American deer mouse	MODERN SPECIES	13	Zfp523 (ENSPEMG00000003720) #7	Def6 (ENSPEMG00000012978) #8	Ppard (ENSPEMG00000006235) #9	Fance (ENSPEMG00000012868) #10	Rpl10a (ENSPEMG00000013589) #11	Tead3 (ENSPEMG00000012216) #12	Tulp1 (ENSPEMG00000015585) #13	ENSPEMG00000030692 #14	ENSPEMG00000028961 #14	Armc12 (ENSPEMG00000019234) #15	Clpsl2 (ENSPEMG00000012070) #16	Clps (ENSPEMG00000000653) #18	Lhfpl5 (ENSPEMG00000012344) #19	Srpk1 (ENSPEMG00000010327) #20	Slc26a8 (ENSPEMG00000016320) #21	Mapk14 (ENSPEMG00000016661) #22	Mapk13 (ENSPEMG00000018845) #24	Brpf3 (ENSPEMG00000025317) #25	Pnpla1 (ENSPEMG00000011924) #26	Bnip5 (ENSPEMG00000012017) #27	Pxt1 (ENSPEMG00000016811) #30	Kctd20 (ENSPEMG00000016381) #31	Stk38 (ENSPEMG00000014581) #32	ENSPEMG00000013444 #33	Cdkn1a (ENSPEMG00000016513) #35	Rab44 (ENSPEMG00000008688) #36	Cpne5 (ENSPEMG00000008964) #37	ENSPEMG00000007309	BC004004 (ENSPEMG00000015973)	Pi16 (ENSPEMG00000009543)	Mtch1 (ENSPEMG00000014284)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1087	Scube3 (ENSNGAG00000013392)	ENSNGAG00000012643 #7	Def6 (ENSNGAG00000002294) #8	Ppard (ENSNGAG00000000295) #9	ENSNGAG00000018624 #10	Rpl10a (ENSNGAG00000021389) #11	Tead3 (ENSNGAG00000014489) #12	ENSNGAG00000012735 #13	Fkbp5 (ENSNGAG00000010012) #14	Armc12 (ENSNGAG00000006271) #15	Clpsl2 (ENSNGAG00000005121) #16	Clps (ENSNGAG00000003954) #18	Lhfpl5 (ENSNGAG00000019158) #19	Srpk1 (ENSNGAG00000015100) #20	Slc26a8 (ENSNGAG00000013089) #21	Mapk14 (ENSNGAG00000010289) #22	Mapk13 (ENSNGAG00000021207) #24	ENSNGAG00000021001 #25	ENSNGAG00000020725 #25	Pnpla1 (ENSNGAG00000019143) #26	Bnip5 (ENSNGAG00000018282) #27	ENSNGAG00000017118 #30	Kctd20 (ENSNGAG00000016900) #31	Stk38 (ENSNGAG00000015957) #32	Srsf3 (ENSNGAG00000015240) #33	Cdkn1a (ENSNGAG00000015092) #35	ENSNGAG00000014378 #36	Cpne5 (ENSNGAG00000012496) #37	Ppil1 (ENSNGAG00000008969)	BC004004 (ENSNGAG00000006992)	ENSNGAG00000005752
Lesser Egyptian jerboa	MODERN SPECIES	41	Scube3 (ENSJJAG00000020942)	Zfp523 (ENSJJAG00000006658) #7	Def6 (ENSJJAG00000020328) #8	Ppard (ENSJJAG00000004398) #9	ENSJJAG00000022676 #10	ENSJJAG00000014896 #11	Tead3 (ENSJJAG00000022931) #12	Tulp1 (ENSJJAG00000023576) #13	Fkbp5 (ENSJJAG00000020149) #14	Armc12 (ENSJJAG00000018237) #15	ENSJJAG00000017544 #16	Clps (ENSJJAG00000018433) #18	Lhfpl5 (ENSJJAG00000018498) #19	Srpk1 (ENSJJAG00000020482) #20	Slc26a8 (ENSJJAG00000020048) #21	Mapk14 (ENSJJAG00000016348) #22	Mapk13 (ENSJJAG00000012060) #24	ENSJJAG00000000522 #25	ENSJJAG00000018307 #25	Pnpla1 (ENSJJAG00000022011) #26	Bnip5 (ENSJJAG00000013964) #27	ENSJJAG00000017410	ENSJJAG00000017222 #31	ENSJJAG00000016482 #32	ENSJJAG00000022324 #33	Cdkn1a (ENSJJAG00000021179) #35	ENSJJAG00000021852 #36	Cpne5 (ENSJJAG00000012782) #37	Ppil1 (ENSJJAG00000020992)	BC004004 (ENSJJAG00000017257)	Pi16 (ENSJJAG00000022488)
Kangaroo rat	MODERN SPECIES	439	Tcp11 (ENSDORG00000009354)	Scube3 (ENSDORG00000003155)	ENSDORG00000004835 #7	Def6 (ENSDORG00000004837) #8	Ppard (ENSDORG00000009154) #9	Rpl10a (ENSDORG00000024646) #11	Tead3 (ENSDORG00000010798) #12	Tulp1 (ENSDORG00000000427) #13	Fkbp5 (ENSDORG00000007823) #14	Armc12 (ENSDORG00000023597) #15	ENSDORG00000000744 #16	Clps (ENSDORG00000026397) #18	Lhfpl5 (ENSDORG00000024086) #19	Srpk1 (ENSDORG00000028527) #20	Slc26a8 (ENSDORG00000028148) #21	Mapk14 (ENSDORG00000027533) #22	Mapk13 (ENSDORG00000014494) #24	ENSDORG00000024626 #25	ENSDORG00000004827 #25	ENSDORG00000028325 #26	ENSDORG00000028859 #27	ENSDORG00000024772 #30	Kctd20 (ENSDORG00000005520) #31	ENSDORG00000027964 #32	Srsf3 (ENSDORG00000012283) #33	Cdkn1a (ENSDORG00000023688) #35	ENSDORG00000028743 #37	ENSDORG00000028401 #37	Ppil1 (ENSDORG00000024549)	BC004004 (ENSDORG00000007836)	Pi16 (ENSDORG00000007840)
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584.f #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT01000000217497	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Naked mole-rat female	MODERN SPECIES	4	ZNF76 (ENSHGLG00000013342) #7	DEF6 (ENSHGLG00000012785) #8	ENSHGLG00000012625 #9	ENSHGLG00000029161	FANCE (ENSHGLG00000012417) #10	RPL10A (ENSHGLG00000012269) #11	TEAD3 (ENSHGLG00000012119) #12	TULP1 (ENSHGLG00000011964) #13	FKBP5 (ENSHGLG00000011702) #14	ARMC12 (ENSHGLG00000011370) #15	CLPSL2 (ENSHGLG00000011202) #16	CLPS (ENSHGLG00000010953) #18	LHFPL5 (ENSHGLG00000010688) #19	Srpk1 (ENSHGLG00000010559) #20	ENSHGLG00000015890 #21	MAPK14 (ENSHGLG00000015825) #22	MAPK13 (ENSHGLG00000015728) #24	BRPF3 (ENSHGLG00000015657) #25	PNPLA1 (ENSHGLG00000015567) #26	ENSHGLG00000036842 #27	ENSHGLG00000050754	ENSHGLG00000017397 #31	STK38 (ENSHGLG00000017058) #32	ENSHGLG00000017051	SRSF3 (ENSHGLG00000017042) #33	CDKN1A (ENSHGLG00000017033) #35	ENSHGLG00000000630	RAB44 (ENSHGLG00000017024) #36	CPNE5 (ENSHGLG00000017384) #37	PPIL1 (ENSHGLG00000017369)	ENSHGLG00000019450
Hystricomorpha_a	ANCESTRAL SPECIES	42	ENSGT00940000161869	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584.f #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT01000000217497	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32
Guinea pig	MODERN SPECIES	15	TCP11 (ENSCPOG00000011287)	SCUBE3 (ENSCPOG00000015286)	ZNF76 (ENSCPOG00000007381) #7	DEF6 (ENSCPOG00000027364) #8	PPARD (ENSCPOG00000011385) #9	FANCE (ENSCPOG00000005569) #10	RPL10A (ENSCPOG00000005577) #11	TEAD3 (ENSCPOG00000005578) #12	TULP1 (ENSCPOG00000022079) #13	FKBP5 (ENSCPOG00000000520) #14	ARMC12 (ENSCPOG00000022443) #15	CLPS (ENSCPOG00000014154) #18	LHFPL5 (ENSCPOG00000021224) #19	SRPK1 (ENSCPOG00000004173) #20	SLC26A8 (ENSCPOG00000014887) #21	MAPK14 (ENSCPOG00000014893) #22	MAPK13 (ENSCPOG00000014626) #24	BRPF3 (ENSCPOG00000010214) #25	PNPLA1 (ENSCPOG00000003920) #26	KCTD20 (ENSCPOG00000032447) #31	STK38 (ENSCPOG00000004471) #32	KCNK5 (ENSCPOG00000021494)	SAYSD1 (ENSCPOG00000015443)	GLP1R (ENSCPOG00000015440)	DNAH8 (ENSCPOG00000010058)	GLO1 (ENSCPOG00000030910)	BTBD9 (ENSCPOG00000014662)	ZFAND3 (ENSCPOG00000014660)	MDGA1 (ENSCPOG00000000671)	CCDC167 (ENSCPOG00000010310)	CMTR1 (ENSCPOG00000010298)
Hystricomorpha_b	ANCESTRAL SPECIES	3	ENSGT00940000155806	ENSGT00940000161869	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584.f #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT01000000217497	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00940000159813	ENSGT00940000156775	ENSGT00390000004313	ENSGT00940000161009	ENSGT00940000158992	ENSGT00390000009312.h	ENSGT00940000158298	ENSGT00940000165659
Long-tailed chinchilla	MODERN SPECIES	144	ANKS1A (ENSCLAG00000009134)	TCP11 (ENSCLAG00000011475)	SCUBE3 (ENSCLAG00000012780)	ZNF76 (ENSCLAG00000007582) #7	DEF6 (ENSCLAG00000010815) #8	PPARD (ENSCLAG00000008716) #9	FANCE (ENSCLAG00000009867) #10	RPL10A (ENSCLAG00000013481) #11	TEAD3 (ENSCLAG00000012426) #12	ENSCLAG00000007729 #13	FKBP5 (ENSCLAG00000008953) #14	ARMC12 (ENSCLAG00000012362) #15	ENSCLAG00000013482 #18	LHFPL5 (ENSCLAG00000010444) #19	ENSCLAG00000010564 #20	MAPK14 (ENSCLAG00000009182) #22	MAPK13 (ENSCLAG00000012645) #24	BRPF3 (ENSCLAG00000014650) #25	PNPLA1 (ENSCLAG00000014322) #26	BNIP5 (ENSCLAG00000011215) #27	ENSCLAG00000010806	KCTD20 (ENSCLAG00000011525) #31	STK38 (ENSCLAG00000008152) #32	KCNK16 (ENSCLAG00000010814)	KCNK5 (ENSCLAG00000015932)	SAYSD1 (ENSCLAG00000008142)	GLP1R (ENSCLAG00000010274)	DNAH8 (ENSCLAG00000010447)	GLO1 (ENSCLAG00000012717)	BTBD9 (ENSCLAG00000014696)	ENSCLAG00000010007
Degu	MODERN SPECIES	46	ENSODEG00000020378	SCUBE3 (ENSODEG00000017212)	ENSODEG00000020389	ZNF76 (ENSODEG00000017147) #7	DEF6 (ENSODEG00000016832) #8	ENSODEG00000020393	PPARD (ENSODEG00000017223) #9	RPL10A (ENSODEG00000016699) #11	TEAD3 (ENSODEG00000016731) #12	FKBP5 (ENSODEG00000017317) #14	ENSODEG00000016851	ARMC12 (ENSODEG00000016906) #15	CLPS (ENSODEG00000016885) #18	LHFPL5 (ENSODEG00000016672) #19	SRPK1 (ENSODEG00000016786) #20	MAPK14 (ENSODEG00000016354) #22	MAPK13 (ENSODEG00000017060) #24	BRPF3 (ENSODEG00000016708) #25	ENSODEG00000016514 #25	KCTD20 (ENSODEG00000017286) #31	STK38 (ENSODEG00000016941) #32	ENSODEG00000016778	KCNK5 (ENSODEG00000017022)	ENSODEG00000020422	GLP1R (ENSODEG00000016982)	DNAH8 (ENSODEG00000016773)	GLO1 (ENSODEG00000016507)	BTBD9 (ENSODEG00000016311)	ENSODEG00000016428	MDGA1 (ENSODEG00000016824)	CMTR1 (ENSODEG00000017441)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Eurasian red squirrel	DUPLICATION
Eurasian red squirrel	MODERN SPECIES	16	PPARD (ENSSVLG00005008351) #9	FANCE (ENSSVLG00005008269) #10	RPL10A (ENSSVLG00005008232) #11	TEAD3 (ENSSVLG00005008177) #12	TULP1 (ENSSVLG00005007903) #13	FKBP5 (ENSSVLG00005007720) #14	ARMC12 (ENSSVLG00005007605) #15	CLPSL2 (ENSSVLG00005007579) #16	ENSSVLG00005007555 #17	CLPS (ENSSVLG00005007519) #18	LHFPL5 (ENSSVLG00005007493) #19	ENSSVLG00005007332 #20	ENSSVLG00005007292	ENSSVLG00005007274	SLC26A8 (ENSSVLG00005007071) #21	ENSSVLG00005006939 #22	MAPK13 (ENSSVLG00005006787) #24	BRPF3 (ENSSVLG00005006666) #25	BNIP5 (ENSSVLG00005006367) #27	PXT1 (ENSSVLG00005006244) #30	KCTD20 (ENSSVLG00005006146) #31	STK38 (ENSSVLG00005006116) #32	SRSF3 (ENSSVLG00005006090) #33	CDKN1A (ENSSVLG00005006061) #35	RAB44 (ENSSVLG00005005971) #36	CPNE5 (ENSSVLG00005005838) #37	PPIL1 (ENSSVLG00005005795)	C6orf89 (ENSSVLG00005005762)	PI16 (ENSSVLG00005005702)	MTCH1 (ENSSVLG00005005671)	FGD2 (ENSSVLG00005005578)
Eurasian red squirrel	MODERN SPECIES		DIO1 (ENSSVLG00005001977)	YIPF1 (ENSSVLG00005001948)	NDC1 (ENSSVLG00005001920)	GLIS1 (ENSSVLG00005001890)	DMRTB1 (ENSSVLG00005001863)	ENSSVLG00005001849	LRP8 (ENSSVLG00005001262)	MAGOH (ENSSVLG00005000778)	CZIB (ENSSVLG00005000753)	CPT2 (ENSSVLG00005000722)	SLC1A7 (ENSSVLG00005000679)	PODN (ENSSVLG00005000648)	ENSSVLG00005000618	ENSSVLG00005000593	SCP2 (ENSSVLG00005000507)	ENSSVLG00005000425 #22	ECHDC2 (ENSSVLG00005000395)	ZYG11A (ENSSVLG00005000332)	ENSSVLG00005000308	COA7 (ENSSVLG00005000295)	SHISAL2A (ENSSVLG00005000179)	ENSSVLG00005020075	GPX7 (ENSSVLG00005019992)	TUT4 (ENSSVLG00005019510)	PRPF38A (ENSSVLG00005019181)	ORC1 (ENSSVLG00005018995)	CC2D1B (ENSSVLG00005018179)	ZFYVE9 (ENSSVLG00005017916)	BTF3L4 (ENSSVLG00005017708)	ENSSVLG00005017649	TXNDC12 (ENSSVLG00005017615)
Marmotini	ANCESTRAL SPECIES	18	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00730000111212.z	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00960000190984	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Alpin marmot	MODERN SPECIES	20	SCUBE3 (ENSMMMG00000024326)	ZNF76 (ENSMMMG00000024327) #7	DEF6 (ENSMMMG00000024328) #8	PPARD (ENSMMMG00000024329) #9	FANCE (ENSMMMG00000024330) #10	RPL10A (ENSMMMG00000024331) #11	TEAD3 (ENSMMMG00000024332) #12	ENSMMMG00000024333 #13	FKBP5 (ENSMMMG00000024335) #14	ARMC12 (ENSMMMG00000024339) #15	ENSMMMG00000024340	CLPS (ENSMMMG00000024341) #18	LHFPL5 (ENSMMMG00000024343) #19	SRPK1 (ENSMMMG00000024344) #20	ENSMMMG00000024345 #21	MAPK14 (ENSMMMG00000024347) #22	MAPK13 (ENSMMMG00000024349) #24	BRPF3 (ENSMMMG00000024354) #25	PNPLA1 (ENSMMMG00000024358) #26	ETV7 (ENSMMMG00000024361) #29	ENSMMMG00000024362	ENSMMMG00000024363	ENSMMMG00000024364	KCTD20 (ENSMMMG00000024365) #31	STK38 (ENSMMMG00000024371) #32	SRSF3 (ENSMMMG00000024376) #33	CDKN1A (ENSMMMG00000024377) #35	RAB44 (ENSMMMG00000024379) #36	CPNE5 (ENSMMMG00000024381) #37	PPIL1 (ENSMMMG00000024382)	C6orf89 (ENSMMMG00000024383)
Marmotini_b	ANCESTRAL SPECIES	8	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00730000111212.z	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00960000190984	ENSGT00950000185279	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Arctic ground squirrel	MODERN SPECIES	25	ZNF76 (ENSUPAG00010014957) #7	DEF6 (ENSUPAG00010015048) #8	PPARD (ENSUPAG00010015080) #9	FANCE (ENSUPAG00010015114) #10	RPL10A (ENSUPAG00010015209) #11	TEAD3 (ENSUPAG00010015261) #12	ENSUPAG00010015324 #13	FKBP5 (ENSUPAG00010015333) #14	ARMC12 (ENSUPAG00010015400) #15	CLPSL2 (ENSUPAG00010015452) #16	ENSUPAG00010015457	CLPS (ENSUPAG00010015472) #18	LHFPL5 (ENSUPAG00010015483) #19	SRPK1 (ENSUPAG00010015498) #20	ENSUPAG00010015523 #21	MAPK14 (ENSUPAG00010015552) #22	MAPK13 (ENSUPAG00010015630) #24	BRPF3 (ENSUPAG00010015651) #25	PNPLA1 (ENSUPAG00010015749) #26	BNIP5 (ENSUPAG00010015770) #27	ETV7 (ENSUPAG00010015790) #29	ENSUPAG00010015813	ENSUPAG00010015816	KCTD20 (ENSUPAG00010015823) #31	STK38 (ENSUPAG00010015884) #32	SRSF3 (ENSUPAG00010015936) #33	CDKN1A (ENSUPAG00010015940) #35	RAB44 (ENSUPAG00010015948) #36	CPNE5 (ENSUPAG00010015960) #37	ENSUPAG00010015992	C6orf89 (ENSUPAG00010015999)
Squirrel	MODERN SPECIES	76	ZNF76 (ENSSTOG00000000256) #7	DEF6 (ENSSTOG00000023306) #8	PPARD (ENSSTOG00000019649) #9	FANCE (ENSSTOG00000000259) #10	ENSSTOG00000023366 #11	TEAD3 (ENSSTOG00000024296) #12	TULP1 (ENSSTOG00000015488) #13	FKBP5 (ENSSTOG00000023914) #14	ARMC12 (ENSSTOG00000013713) #15	CLPSL2 (ENSSTOG00000006012) #16	ENSSTOG00000034801	Clps (ENSSTOG00000027903) #18	LHFPL5 (ENSSTOG00000013721) #19	SRPK1 (ENSSTOG00000013724) #20	SLC26A8 (ENSSTOG00000008184) #21	MAPK14 (ENSSTOG00000020831) #22	MAPK13 (ENSSTOG00000025085) #24	ENSSTOG00000033183	BRPF3 (ENSSTOG00000006742) #25	PNPLA1 (ENSSTOG00000026201) #26	BNIP5 (ENSSTOG00000007388) #27	ETV7 (ENSSTOG00000027253) #29	ENSSTOG00000030608	ENSSTOG00000031664	KCTD20 (ENSSTOG00000011974) #31	ENSSTOG00000025407	STK38 (ENSSTOG00000011981) #32	ENSSTOG00000014280 #33	CDKN1A (ENSSTOG00000021551) #35	ENSSTOG00000033346	ENSSTOG00000020682 #36
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00990000203541.a.a.a.a.b ##19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155325 #22
Hedgehog	MODERN SPECIES	1422																MAPK14 (ENSEEUG00000009590) #22
Common shrew	MODERN SPECIES	933																MAPK14 (ENSSARG00000003065) #22
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C
Equus	ANCESTRAL SPECIES	10	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.q.b #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Horse	MODERN SPECIES	12	ZNF76 (ENSECAG00000014843) #7	DEF6 (ENSECAG00000022088) #8	PPARD (ENSECAG00000008227) #9	ENSECAG00000043329	FANCE (ENSECAG00000013190) #10	RPL10A (ENSECAG00000014090) #11	TULP1 (ENSECAG00000007517) #13	FKBP5 (ENSECAG00000011304) #14	ENSECAG00000053155	ARMC12 (ENSECAG00000011493) #15	CLPSL2 (ENSECAG00000043440) #16	CLPS (ENSECAG00000012160) #18	LHFPL5 (ENSECAG00000014034) #19	SRPK1 (ENSECAG00000014213) #20	SLC26A8 (ENSECAG00000000493) #21	MAPK14 (ENSECAG00000014175) #22	MAPK13 (ENSECAG00000030024) #24	BRPF3 (ENSECAG00000005945) #25	PNPLA1 (ENSECAG00000012343) #26	BNIP5 (ENSECAG00000013634) #27	ETV7 (ENSECAG00000014519) #29	PXT1 (ENSECAG00000016858) #30	KCTD20 (ENSECAG00000017166) #31	STK38 (ENSECAG00000018553) #32	SRSF3 (ENSECAG00000018741) #33	CDKN1A (ENSECAG00000021543) #35	RAB44 (ENSECAG00000000519) #36	CPNE5 (ENSECAG00000008178) #37	PPIL1 (ENSECAG00000022373)	C20H6orf89 (ENSECAG00000024122)	PI16 (ENSECAG00000024845)
Donkey	MODERN SPECIES	28	PPARD (ENSEASG00005021192) #9	ENSEASG00005031872	FANCE (ENSEASG00005021199) #10	ENSEASG00005021203	RPL10A (ENSEASG00005021204) #11	TEAD3 (ENSEASG00005021216) #12	TULP1 (ENSEASG00005021232) #13	FKBP5 (ENSEASG00005021242) #14	ARMC12 (ENSEASG00005021247) #15	CLPSL2 (ENSEASG00005035770) #16	ENSEASG00005021252 #17	CLPS (ENSEASG00005038646) #18	LHFPL5 (ENSEASG00005021258) #19	SRPK1 (ENSEASG00005021262) #20	SLC26A8 (ENSEASG00005021272) #21	MAPK14 (ENSEASG00005021290) #22	MAPK13 (ENSEASG00005028422) #24	BRPF3 (ENSEASG00005021301) #25	PNPLA1 (ENSEASG00005021307) #26	BNIP5 (ENSEASG00005021313) #27	ETV7 (ENSEASG00005021318) #29	STK38 (ENSEASG00005021330) #32	KCTD20 (ENSEASG00005021324) #31	ENSEASG00005024991 #33	ENSEASG00005030151 #35	RAB44 (ENSEASG00005021342) #36	ENSEASG00005021346	CPNE5 (ENSEASG00005021349) #37	PPIL1 (ENSEASG00005021354)	C6orf89 (ENSEASG00005021359)	PI16 (ENSEASG00005021366)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Megabat	MODERN SPECIES	3221											ENSPVAG00000014970	CLPS (ENSPVAG00000014973) #18	LHFPL5 (ENSPVAG00000014974) #19	SRPK1 (ENSPVAG00000014976) #20	SLC26A8 (ENSPVAG00000014977) #21	MAPK14 (ENSPVAG00000014978) #22	MAPK13 (ENSPVAG00000014979) #24
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Microbat	MODERN SPECIES	1284		SCUBE3 (ENSMLUG00000008561)	ZNF76 (ENSMLUG00000008610) #7	DEF6 (ENSMLUG00000008624) #8	PPARD (ENSMLUG00000010594) #9	ENSMLUG00000023455	ENSMLUG00000024807	FKBP5 (ENSMLUG00000011255) #14	ARMC12 (ENSMLUG00000005100) #15	ENSMLUG00000022424	ENSMLUG00000010934 #17	CLPS (ENSMLUG00000010948) #18	LHFPL5 (ENSMLUG00000010960) #19	SRPK1 (ENSMLUG00000010974) #20	SLC26A8 (ENSMLUG00000003668) #21	MAPK14 (ENSMLUG00000005967) #22	ENSMLUG00000024504 #24	BRPF3 (ENSMLUG00000002418) #25	PNPLA1 (ENSMLUG00000000853) #26	BNIP5 (ENSMLUG00000000855) #27	ENSMLUG00000000866 #29	KCTD20 (ENSMLUG00000007139) #31	STK38 (ENSMLUG00000007149) #32
Greater horseshoe bat	DUPLICATION
Greater horseshoe bat	MODERN SPECIES	21	ZNF76 (ENSRFEG00010019335) #7	DEF6 (ENSRFEG00010019383) #8	PPARD (ENSRFEG00010019439) #9	FANCE (ENSRFEG00010019502) #10	ENSRFEG00010019551 #11	TEAD3 (ENSRFEG00010019591) #12	TULP1 (ENSRFEG00010019664) #13	ENSRFEG00010019994	FKBP5 (ENSRFEG00010020019) #14	ARMC12 (ENSRFEG00010020075) #15	CLPSL2 (ENSRFEG00010020118) #16	CLPS (ENSRFEG00010020142) #18	LHFPL5 (ENSRFEG00010020200) #19	SRPK1 (ENSRFEG00010020229) #20	SLC26A8 (ENSRFEG00010020412) #21	ENSRFEG00010020448 #22	MAPK13 (ENSRFEG00010020524) #24	BRPF3 (ENSRFEG00010020671) #25	PNPLA1 (ENSRFEG00010020753) #26	BNIP5 (ENSRFEG00010020784) #27	ETV7 (ENSRFEG00010020844) #29	PXT1 (ENSRFEG00010020911) #30	ENSRFEG00010020924	KCTD20 (ENSRFEG00010020936) #31	STK38 (ENSRFEG00010020970) #32	SRSF3 (ENSRFEG00010020983) #33	CDKN1A (ENSRFEG00010021000) #35	RAB44 (ENSRFEG00010021014) #36	CPNE5 (ENSRFEG00010000192) #37	PPIL1 (ENSRFEG00010000231)	C6orf89 (ENSRFEG00010000262)
Greater horseshoe bat	MODERN SPECIES	23	SRP72 (ENSRFEG00010004765)	ARL9 (ENSRFEG00010004781)	THEGL (ENSRFEG00010004797)	HOPX (ENSRFEG00010004815)	ENSRFEG00010004833	REST (ENSRFEG00010004854)	NOA1 (ENSRFEG00010004863)	POLR2B (ENSRFEG00010004893)	IGFBP7 (ENSRFEG00010004923)	ENSRFEG00010004930	ENSRFEG00010010303	ENSRFEG00010010359	ADGRL3 (ENSRFEG00010010560)	ENSRFEG00010011269	TECRL (ENSRFEG00010011319)	ENSRFEG00010011678 #22	ENSRFEG00010011689	EPHA5 (ENSRFEG00010011768)	ENSRFEG00010013182	ENSRFEG00010013198	CENPC (ENSRFEG00010013218)	STAP1 (ENSRFEG00010013275)	UBA6 (ENSRFEG00010013313)	GNRHR (ENSRFEG00010013422)	ENSRFEG00010013481	TMPRSS11D (ENSRFEG00010013679)	TMPRSS11A (ENSRFEG00010013841)	ENSRFEG00010014010	TMPRSS11F (ENSRFEG00010014158)	ENSRFEG00010014313	ENSRFEG00010014472
Carnivora	ANCESTRAL SPECIES	4	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Cat	MODERN SPECIES	236	ZNF76 (ENSFCAG00000005893) #7	DEF6 (ENSFCAG00000005895) #8	PPARD (ENSFCAG00000025234) #9	FANCE (ENSFCAG00000012902) #10	RPL10A (ENSFCAG00000012904) #11	TEAD3 (ENSFCAG00000012905) #12	TULP1 (ENSFCAG00000012907) #13	FKBP5 (ENSFCAG00000031002) #14	ARMC12 (ENSFCAG00000032771) #15	CLPSL2 (ENSFCAG00000044382) #16	ENSFCAG00000048579	CLPS (ENSFCAG00000044769) #18	LHFPL5 (ENSFCAG00000037353) #19	SRPK1 (ENSFCAG00000026404) #20	SLC26A8 (ENSFCAG00000014824) #21	MAPK14 (ENSFCAG00000027782) #22	MAPK13 (ENSFCAG00000001747) #24	BRPF3 (ENSFCAG00000001748) #25	PNPLA1 (ENSFCAG00000001750) #26	BNIP5 (ENSFCAG00000001752) #27	ETV7 (ENSFCAG00000001082) #29	ENSFCAG00000035650	KCTD20 (ENSFCAG00000023163) #31	STK38 (ENSFCAG00000018473) #32	ENSFCAG00000001084 #33	CDKN1A (ENSFCAG00000027886) #35	RAB44 (ENSFCAG00000023379) #36	CPNE5 (ENSFCAG00000001089) #37	PPIL1 (ENSFCAG00000034797)	CB2H6orf89 (ENSFCAG00000001091)	PI16 (ENSFCAG00000028703)
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Tiger	MODERN SPECIES	220	TCP11 (ENSPTIG00000015068)	SCUBE3 (ENSPTIG00000011959)	ZNF76 (ENSPTIG00000010061) #7	DEF6 (ENSPTIG00000007928) #8	PPARD (ENSPTIG00000006427) #9	FANCE (ENSPTIG00000005820) #10	RPL10A (ENSPTIG00000005442) #11	TEAD3 (ENSPTIG00000021287) #12	TULP1 (ENSPTIG00000020692) #13	FKBP5 (ENSPTIG00000019998) #14	ARMC12 (ENSPTIG00000019598) #15	CLPS (ENSPTIG00000019273) #18	LHFPL5 (ENSPTIG00000019186) #19	SRPK1 (ENSPTIG00000016614) #20	SLC26A8 (ENSPTIG00000013528) #21	MAPK14 (ENSPTIG00000011843) #22	MAPK13 (ENSPTIG00000009812) #24	BRPF3 (ENSPTIG00000006629) #25	PNPLA1 (ENSPTIG00000022017) #26	BNIP5 (ENSPTIG00000021932) #27	ETV7 (ENSPTIG00000021767) #29	PXT1 (ENSPTIG00000021668) #30	ENSPTIG00000004591	KCTD20 (ENSPTIG00000021203) #31	STK38 (ENSPTIG00000020175) #32	SRSF3 (ENSPTIG00000019446) #33	CDKN1A (ENSPTIG00000019178) #35	RAB44 (ENSPTIG00000017870) #36	CPNE5 (ENSPTIG00000015366) #37	PPIL1 (ENSPTIG00000015004)	C6orf89 (ENSPTIG00000014042)
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156819.a.b	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
lion	MODERN SPECIES	5	ZNF76 (ENSPLOG00000013876) #7	DEF6 (ENSPLOG00000013958) #8	PPARD (ENSPLOG00000014014) #9	FANCE (ENSPLOG00000014168) #10	RPL10A (ENSPLOG00000014251) #11	TEAD3 (ENSPLOG00000014338) #12	TULP1 (ENSPLOG00000014616) #13	FKBP5 (ENSPLOG00000015056) #14	ARMC12 (ENSPLOG00000015132) #15	CLPSL2 (ENSPLOG00000015301) #16	ENSPLOG00000015345 #17	CLPS (ENSPLOG00000015406) #18	LHFPL5 (ENSPLOG00000015492) #19	SRPK1 (ENSPLOG00000015544) #20	SLC26A8 (ENSPLOG00000015821) #21	MAPK14 (ENSPLOG00000015927) #22	MAPK13 (ENSPLOG00000016263) #24	BRPF3 (ENSPLOG00000016459) #25	PNPLA1 (ENSPLOG00000016552) #26	BNIP5 (ENSPLOG00000016630) #27	ENSPLOG00000016774 #29	PXT1 (ENSPLOG00000000315) #30	KCTD20 (ENSPLOG00000000347) #31	STK38 (ENSPLOG00000000375) #32	SRSF3 (ENSPLOG00000000404) #33	CDKN1A (ENSPLOG00000000421) #35	RAB44 (ENSPLOG00000000433) #36	ENSPLOG00000000452	CPNE5 (ENSPLOG00000000475) #37	PPIL1 (ENSPLOG00000000515)	C6orf89 (ENSPLOG00000000558)
leopard	MODERN SPECIES	30	TCP11 (ENSPPRG00000003440)	SCUBE3 (ENSPPRG00000023073)	ZNF76 (ENSPPRG00000021755) #7	DEF6 (ENSPPRG00000017932) #8	PPARD (ENSPPRG00000016019) #9	FANCE (ENSPPRG00000013287) #10	RPL10A (ENSPPRG00000013138) #11	TEAD3 (ENSPPRG00000012932) #12	TULP1 (ENSPPRG00000010887) #13	FKBP5 (ENSPPRG00000008864) #14	ARMC12 (ENSPPRG00000007486) #15	CLPS (ENSPPRG00000006769) #18	LHFPL5 (ENSPPRG00000006583) #19	SRPK1 (ENSPPRG00000006274) #20	SLC26A8 (ENSPPRG00000004024) #21	MAPK14 (ENSPPRG00000002933) #22	MAPK13 (ENSPPRG00000002068) #24	BRPF3 (ENSPPRG00000000401) #25	PNPLA1 (ENSPPRG00000022904) #26	BNIP5 (ENSPPRG00000020238) #27	ETV7 (ENSPPRG00000016205) #29	PXT1 (ENSPPRG00000015453) #30	KCTD20 (ENSPPRG00000014158) #31	STK38 (ENSPPRG00000012797) #32	ENSPPRG00000012493 #33	CDKN1A (ENSPPRG00000011957) #35	RAB44 (ENSPPRG00000011437) #36	CPNE5 (ENSPPRG00000009095) #37	PPIL1 (ENSPPRG00000006635)	C6orf89 (ENSPPRG00000006233)	PI16 (ENSPPRG00000005249)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Canidae	ANCESTRAL SPECIES	6	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00550000074855.v.a.a	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Canis_lupus	ANCESTRAL SPECIES	11	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00550000074855.v.a.a	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.i #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Dingo	MODERN SPECIES	276	SCUBE3 (ENSCAFG00020006984)	ZNF76 (ENSCAFG00020006995) #7	DEF6 (ENSCAFG00020007011) #8	PPARD (ENSCAFG00020007019) #9	FANCE (ENSCAFG00020007027) #10	ENSCAFG00020007031 ##11	TEAD3 (ENSCAFG00020007039) #12	TULP1 (ENSCAFG00020007044) #13	FKBP5 (ENSCAFG00020007094) #14	ARMC12 (ENSCAFG00020007104) #15	CLPSL2 (ENSCAFG00020007116) #16	CLPS (ENSCAFG00020007125) #18	LHFPL5 (ENSCAFG00020007127) #19	SRPK1 (ENSCAFG00020007137) #20	SLC26A8 (ENSCAFG00020007158) #21	MAPK14 (ENSCAFG00020007162) #22	MAPK13 (ENSCAFG00020007173) #24	BRPF3 (ENSCAFG00020007188) #25	ENSCAFG00020007208 #25	PNPLA1 (ENSCAFG00020007210) #26	BNIP5 (ENSCAFG00020007215) #27	ETV7 (ENSCAFG00020007218) #29	PXT1 (ENSCAFG00020007228) #30	ENSCAFG00020007232	KCTD20 (ENSCAFG00020007237) #31	ENSCAFG00020007249 #32	SRSF3 (ENSCAFG00020007292) #33	CDKN1A (ENSCAFG00020007295) #35	RAB44 (ENSCAFG00020007300) #36	CPNE5 (ENSCAFG00020007308) #37	PPIL1 (ENSCAFG00020007325)
Dog	MODERN SPECIES	3	DEF6 (ENSCAFG00845028897) #8	PPARD (ENSCAFG00845028955) #9	FANCE (ENSCAFG00845006312) #10	RPL10A (ENSCAFG00845006364) #11	TEAD3 (ENSCAFG00845006407) #12	TULP1 (ENSCAFG00845006584) #13	ENSCAFG00845006823	ENSCAFG00845006865 #14	ENSCAFG00845006891 #14	ARMC12 (ENSCAFG00845006948) #15	CLPSL2 (ENSCAFG00845006989) #16	CLPS (ENSCAFG00845007025) #18	LHFPL5 (ENSCAFG00845007108) #19	SRPK1 (ENSCAFG00845007276) #20	SLC26A8 (ENSCAFG00845007666) #21	MAPK14 (ENSCAFG00845008249) #22	MAPK14 (ENSCAFG00845008508) #24	BRPF3 (ENSCAFG00845008645) #25	PNPLA1 (ENSCAFG00845008874) #26	BNIP5 (ENSCAFG00845008912) #27	ETV7 (ENSCAFG00845009107) #29	PXT1 (ENSCAFG00845009357) #30	ENSCAFG00845009388	KCTD20 (ENSCAFG00845009418) #31	ENSCAFG00845009463 #32	SRSF3 (ENSCAFG00845009568) #33	ENSCAFG00845009606 #35	RAB44 (ENSCAFG00845009631) #36	CPNE5 (ENSCAFG00845009729) #37	PPIL1 (ENSCAFG00845009972)	C12H6orf89 (ENSCAFG00845010058)
Red fox	MODERN SPECIES	7	SCUBE3 (ENSVVUG00000026167)	ZNF76 (ENSVVUG00000026174) #7	DEF6 (ENSVVUG00000026176) #8	PPARD (ENSVVUG00000026179) #9	FANCE (ENSVVUG00000026181) #10	ENSVVUG00000026182 #11	TEAD3 (ENSVVUG00000026184) #12	TULP1 (ENSVVUG00000026187) #13	FKBP5 (ENSVVUG00000026191) #14	ARMC12 (ENSVVUG00000026193) #15	CLPSL2 (ENSVVUG00000026194) #16	LHFPL5 (ENSVVUG00000026195) #19	CLPS (ENSVVUG00000026196) #18	SRPK1 (ENSVVUG00000026197) #20	SLC26A8 (ENSVVUG00000026199) #21	MAPK14 (ENSVVUG00000026201) #22	MAPK13 (ENSVVUG00000026203) #24	BRPF3 (ENSVVUG00000026204) #25	PNPLA1 (ENSVVUG00000026207) #26	BNIP5 (ENSVVUG00000026209) #27	ETV7 (ENSVVUG00000026211) #29	PXT1 (ENSVVUG00000026213) #30	ENSVVUG00000026217	KCTD20 (ENSVVUG00000026218) #31	STK38 (ENSVVUG00000026226) #32	SRSF3 (ENSVVUG00000026359) #33	CDKN1A (ENSVVUG00000026363) #35	RAB44 (ENSVVUG00000026366) #36	CPNE5 (ENSVVUG00000026373) #37	PPIL1 (ENSVVUG00000026380)	CUNH6orf89 (ENSVVUG00000026386)
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Mustelinae	ANCESTRAL SPECIES	65	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00940000154923.C	ENSGT00910000148442	ENSGT00940000155926	ENSGT00940000160370	ENSGT00950000183029.B.c.b.b.a.x	ENSGT00390000011297	ENSGT01050000244827.E	ENSGT00940000163229	ENSGT00940000162097	ENSGT00940000162601
American mink	MODERN SPECIES	258	DEF6 (ENSNVIG00000011668) #8	ENSNVIG00000011650	PPARD (ENSNVIG00000011565) #9	FANCE (ENSNVIG00000011523) #10	RPL10A (ENSNVIG00000011502) #11	TEAD3 (ENSNVIG00000011470) #12	TULP1 (ENSNVIG00000011373) #13	FKBP5 (ENSNVIG00000011306) #14	ARMC12 (ENSNVIG00000011265) #15	CLPSL2 (ENSNVIG00000011251) #16	COL (ENSNVIG00000011239) #18	LHFPL5 (ENSNVIG00000011232) #19	SRPK1 (ENSNVIG00000011183) #20	ENSNVIG00000011173	SLC26A8 (ENSNVIG00000011113) #21	MAPK14 (ENSNVIG00000011097) #22	MAPK13 (ENSNVIG00000011071) #24
Ferret	MODERN SPECIES	318	SCUBE3 (ENSMPUG00000003499)	ZNF76 (ENSMPUG00000003522) #7	DEF6 (ENSMPUG00000003534) #8	PPARD (ENSMPUG00000003549) #9	FANCE (ENSMPUG00000003560) #10	RPL10A (ENSMPUG00000003568) ##11	TEAD3 (ENSMPUG00000003624) #12	ENSMPUG00000003700	TULP1 (ENSMPUG00000003704) #13	FKBP5 (ENSMPUG00000003749) #14	ARMC12 (ENSMPUG00000003756) #15	CLPS (ENSMPUG00000003780) #18	LHFPL5 (ENSMPUG00000003811) #19	SRPK1 (ENSMPUG00000003819) #20	SLC26A8 (ENSMPUG00000003835) #21	MAPK14 (ENSMPUG00000003927) #22	MAPK13 (ENSMPUG00000004068) #24	BRPF3 (ENSMPUG00000004075) #25	PNPLA1 (ENSMPUG00000004082) #26	ENSMPUG00000004090 #27	ENSMPUG00000004094	ETV7 (ENSMPUG00000004099) #29	ENSMPUG00000004109	COL12A1 (ENSMPUG00000004121)	ENSMPUG00000004149	CD109 (ENSMPUG00000004172)	SLC17A5 (ENSMPUG00000004258)	ENSMPUG00000004271	MTO1 (ENSMPUG00000004323)	CGAS (ENSMPUG00000004335)	ENSMPUG00000004342
Ursidae	ANCESTRAL SPECIES	37	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.n #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Giant Panda	MODERN SPECIES	15	TCP11 (ENSAMEG00000000846)	SCUBE3 (ENSAMEG00000000790)	ZNF76 (ENSAMEG00000000752) #7	DEF6 (ENSAMEG00000000719) #8	PPARD (ENSAMEG00000000689) #9	FANCE (ENSAMEG00000000684) #10	RPL10A (ENSAMEG00000000670) #11	ENSAMEG00000000624 #12	FKBP5 (ENSAMEG00000000571) #14	ARMC12 (ENSAMEG00000030526) #15	ENSAMEG00000023972 #16	CLPS (ENSAMEG00000000558) #18	LHFPL5 (ENSAMEG00000000553) #19	SRPK1 (ENSAMEG00000000501) #20	SLC26A8 (ENSAMEG00000000483) #21	MAPK14 (ENSAMEG00000000425) #22	MAPK13 (ENSAMEG00000000376) #24	BRPF3 (ENSAMEG00000000336) #25	PNPLA1 (ENSAMEG00000000334) #26	BNIP5 (ENSAMEG00000000331) #27	ETV7 (ENSAMEG00000000317) #29	PXT1 (ENSAMEG00000030183) #30	KCTD20 (ENSAMEG00000000300) #31	STK38 (ENSAMEG00000000274) #32	SRSF3 (ENSAMEG00000000268) #33	CDKN1A (ENSAMEG00000026709) #35	RAB44 (ENSAMEG00000000257) #36	ENSAMEG00000029895	CPNE5 (ENSAMEG00000000216) #37	ENSAMEG00000000213	C6orf89 (ENSAMEG00000001140)
Ursus	ANCESTRAL SPECIES	53	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a.n #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Polar bear	MODERN SPECIES	184	DEF6 (ENSUMAG00000010421) #8	PPARD (ENSUMAG00000010402) #9	ENSUMAG00000010392	FANCE (ENSUMAG00000010380) #10	RPL10A (ENSUMAG00000010363) #11	TEAD3 (ENSUMAG00000010306) #12	TULP1 (ENSUMAG00000010287) #13	FKBP5 (ENSUMAG00000010276) #14	ARMC12 (ENSUMAG00000010266) #15	CLPSL2 (ENSUMAG00000010262) #16	CLPS (ENSUMAG00000010261) #18	LHFPL5 (ENSUMAG00000010256) #19	SRPK1 (ENSUMAG00000010252) #20	ENSUMAG00000010249	SLC26A8 (ENSUMAG00000010207) #21	MAPK14 (ENSUMAG00000010189) #22	MAPK13 (ENSUMAG00000010150) #24	BRPF3 (ENSUMAG00000010031) #25	PNPLA1 (ENSUMAG00000010016) #26	BNIP5 (ENSUMAG00000010007) #27	ETV7 (ENSUMAG00000010002) #29	PXT1 (ENSUMAG00000009997) #30	KCTD20 (ENSUMAG00000009992) #31	STK38 (ENSUMAG00000009986) #32	SRSF3 (ENSUMAG00000009985) #33	CDKN1A (ENSUMAG00000009980) #35	RAB44 (ENSUMAG00000009974) #36	CPNE5 (ENSUMAG00000009951) #37	PPIL1 (ENSUMAG00000009945)	C6orf89 (ENSUMAG00000009943)	ENSUMAG00000009937
American black bear	MODERN SPECIES	1528															SLC26A8 (ENSUAMG00000024684) #21	MAPK14 (ENSUAMG00000024685) #22	MAPK13 (ENSUAMG00000024686) #24	BRPF3 (ENSUAMG00000024687) #25	PNPLA1 (ENSUAMG00000024688) #26	BNIP5 (ENSUAMG00000024689) #27	ETV7 (ENSUAMG00000024690) #29
Artiodactyla	ANCESTRAL SPECIES	15	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Suina	ANCESTRAL SPECIES	17	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Chacoan peccary	MODERN SPECIES	782	SCUBE3 (ENSCWAG00000010700)	ZNF76 (ENSCWAG00000010458) #7	DEF6 (ENSCWAG00000010415) #8	PPARD (ENSCWAG00000010262) #9	FANCE (ENSCWAG00000010228) #10	RPL10A (ENSCWAG00000010172) #11	TEAD3 (ENSCWAG00000010092) #12	TULP1 (ENSCWAG00000009432) #13	FKBP5 (ENSCWAG00000009333) #14	ARMC12 (ENSCWAG00000009094) #15	CLPSL2 (ENSCWAG00000009045) #16	CLPS (ENSCWAG00000008987) #18	LHFPL5 (ENSCWAG00000008937) #19	SRPK1 (ENSCWAG00000008797) #20	SLC26A8 (ENSCWAG00000008492) #21	MAPK14 (ENSCWAG00000008308) #22	MAPK13 (ENSCWAG00000008035) #24	BRPF3 (ENSCWAG00000007497) #25	PNPLA1 (ENSCWAG00000007425) #26	BNIP5 (ENSCWAG00000007363) #27	ETV7 (ENSCWAG00000007204) #29	PXT1 (ENSCWAG00000007174) #30	KCTD20 (ENSCWAG00000007127) #31	STK38 (ENSCWAG00000007089) #32	SRSF3 (ENSCWAG00000007064) #33	CDKN1A (ENSCWAG00000007050) #35	RAB44 (ENSCWAG00000006989) #36	CPNE5 (ENSCWAG00000006852) #37	PPIL1 (ENSCWAG00000006814)	C6orf89 (ENSCWAG00000006749)	PI16 (ENSCWAG00000006729)
Pig	MODERN SPECIES	15	ZNF76 (ENSSSCG00000001537) #7	DEF6 (ENSSSCG00000001538) #8	PPARD (ENSSSCG00000001539) #9	FANCE (ENSSSCG00000001546) #10	RPL10A (ENSSSCG00000001543) #11	TEAD3 (ENSSSCG00000001544) #12	ENSSSCG00000062364	TULP1 (ENSSSCG00000035972) #13	FKBP5 (ENSSSCG00000001549) #14	ARMC12 (ENSSSCG00000001550) #15	CLPSL2 (ENSSSCG00000001551) #16	CLPS (ENSSSCG00000001552) #18	LHFPL5 (ENSSSCG00000001553) #19	SRPK1 (ENSSSCG00000001554) #20	SLC26A8 (ENSSSCG00000001555) #21	MAPK14 (ENSSSCG00000001556) #22	MAPK13 (ENSSSCG00000038774) #24	BRPF3 (ENSSSCG00000020803) #25	PNPLA1 (ENSSSCG00000001559) #26	BNIP5 (ENSSSCG00000001560) #27	ETV7 (ENSSSCG00000001561) #29	PXT1 (ENSSSCG00000036420) #30	KCTD20 (ENSSSCG00000001562) #31	STK38 (ENSSSCG00000001563) #32	SRSF3 (ENSSSCG00000001564) #33	CDKN1A (ENSSSCG00000001565) #35	RAB44 (ENSSSCG00000001566) #36	CPNE5 (ENSSSCG00000001567) #37	PPIL1 (ENSSSCG00000040984)	C6orf89 (ENSSSCG00000035341)	PI16 (ENSSSCG00000001570)
Artiodactyla_a	ANCESTRAL SPECIES	19	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Camelidae	ANCESTRAL SPECIES	13	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00400000022846	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Arabian camel	MODERN SPECIES	12	SCUBE3 (ENSCDRG00005008308)	ZNF76 (ENSCDRG00005008400) #7	DEF6 (ENSCDRG00005008572) #8	PPARD (ENSCDRG00005008667) #9	FANCE (ENSCDRG00005008852) #10	RPL10A (ENSCDRG00005008906) #11	TEAD3 (ENSCDRG00005008998) #12	TULP1 (ENSCDRG00005009224) #13	FKBP5 (ENSCDRG00005009952) #14	ARMC12 (ENSCDRG00005010107) #15	CLPSL2 (ENSCDRG00005010158) #16	CLPS (ENSCDRG00005010243) #18	LHFPL5 (ENSCDRG00005010323) #19	SRPK1 (ENSCDRG00005010390) #20	SLC26A8 (ENSCDRG00005010554) #21	MAPK14 (ENSCDRG00005010666) #22	MAPK13 (ENSCDRG00005010926) #24	BRPF3 (ENSCDRG00005011112) #25	PNPLA1 (ENSCDRG00005011395) #26	BNIP5 (ENSCDRG00005011489) #27	ETV7 (ENSCDRG00005011656) #29	PXT1 (ENSCDRG00005011747) #30	KCTD20 (ENSCDRG00005011789) #31	STK38 (ENSCDRG00005011917) #32	SRSF3 (ENSCDRG00005011966) #33	CDKN1A (ENSCDRG00005012011) #35	RAB44 (ENSCDRG00005012046) #36	CPNE5 (ENSCDRG00005012211) #37	PPIL1 (ENSCDRG00005012340)	C6orf89 (ENSCDRG00005012402)	PI16 (ENSCDRG00005012521)
Alpaca	MODERN SPECIES	3585												FKBP5 (ENSVPAG00000010984) #14	ENSVPAG00000010986 ##19	SRPK1 (ENSVPAG00000010989) #20	SLC26A8 (ENSVPAG00000010995) #21	MAPK14 (ENSVPAG00000011000) #22
Artiodactyla_b	ANCESTRAL SPECIES	15	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Cetacea	ANCESTRAL SPECIES	7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00510000049845 #17	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Odontoceti	ANCESTRAL SPECIES	5	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.d #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Odontoceti_a	ANCESTRAL SPECIES	5	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.d #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Dolphin	MODERN SPECIES	1245									ARMC12 (ENSTTRG00000014321) #15	ENSTTRG00000014322	ENSTTRG00000014325 #17	ENSTTRG00000014333 #18	LHFPL5 (ENSTTRG00000014335) #19	SRPK1 (ENSTTRG00000014344) #20	SLC26A8 (ENSTTRG00000014382) #21	MAPK14 (ENSTTRG00000014406) #22	MAPK13 (ENSTTRG00000014413) #24
Odontoceti_b	ANCESTRAL SPECIES	6	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.d #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Vaquita	MODERN SPECIES	2	ZNF76 (ENSPSNG00000017309) #7	DEF6 (ENSPSNG00000017425) #8	PPARD (ENSPSNG00000017498) #9	FANCE (ENSPSNG00000017689) #10	ENSPSNG00000017751 #11	TEAD3 (ENSPSNG00000017802) #12	TULP1 (ENSPSNG00000017936) #13	FKBP5 (ENSPSNG00000018365) #14	ARMC12 (ENSPSNG00000018419) #15	CLPSL2 (ENSPSNG00000018537) #16	CLPS (ENSPSNG00000018593) #18	LHFPL5 (ENSPSNG00000018642) #19	SRPK1 (ENSPSNG00000018699) #20	SLC26A8 (ENSPSNG00000018929) #21	ENSPSNG00000018972	MAPK14 (ENSPSNG00000019052) #22	MAPK13 (ENSPSNG00000019231) #24	BRPF3 (ENSPSNG00000019465) #25	PNPLA1 (ENSPSNG00000019561) #26	BNIP5 (ENSPSNG00000019613) #27	ENSPSNG00000019718 #29	PXT1 (ENSPSNG00000019759) #30	KCTD20 (ENSPSNG00000019789) #31	STK38 (ENSPSNG00000019832) #32	ENSPSNG00000019858	SRSF3 (ENSPSNG00000019876) #33	CDKN1A (ENSPSNG00000019908) #35	RAB44 (ENSPSNG00000019965) #36	CPNE5 (ENSPSNG00000020126) #37	PPIL1 (ENSPSNG00000020265)	C6orf89 (ENSPSNG00000020322)
Monodontidae	ANCESTRAL SPECIES	4	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.d #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000014814.a.b.a.a.b	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Narwhal	MODERN SPECIES	310	DEF6 (ENSMMNG00015010907) #8	PPARD (ENSMMNG00015010868) #9	FANCE (ENSMMNG00015010813) #10	ENSMMNG00015010773	TEAD3 (ENSMMNG00015010746) #12	TULP1 (ENSMMNG00015010597) #13	FKBP5 (ENSMMNG00015010515) #14	ARMC12 (ENSMMNG00015010485) #15	CLPSL2 (ENSMMNG00015010467) #16	CLPS (ENSMMNG00015010451) #18	LHFPL5 (ENSMMNG00015010434) #19	SRPK1 (ENSMMNG00015010401) #20	ENSMMNG00015010381	ENSMMNG00015010370	SLC26A8 (ENSMMNG00015010307) #21	MAPK14 (ENSMMNG00015010235) #22	MAPK13 (ENSMMNG00015010177) #24	BRPF3 (ENSMMNG00015010147) #25	PNPLA1 (ENSMMNG00015010111) #26	BNIP5 (ENSMMNG00015010092) #27	PXT1 (ENSMMNG00015010063) #30	KCTD20 (ENSMMNG00015010053) #31	STK38 (ENSMMNG00015010042) #32	ENSMMNG00015010032	SRSF3 (ENSMMNG00015010026) #33	ENSMMNG00015010020	CDKN1A (ENSMMNG00015010015) #35	RAB44 (ENSMMNG00015009997) #36	CPNE5 (ENSMMNG00015009937) #37	PPIL1 (ENSMMNG00015009922)	C6orf89 (ENSMMNG00015009906)
Beluga whale	MODERN SPECIES	8	DEF6 (ENSDLEG00000020172) #8	PPARD (ENSDLEG00000020180) #9	FANCE (ENSDLEG00000020186) #10	ENSDLEG00000020191 #11	TEAD3 (ENSDLEG00000020206) #12	ENSDLEG00000020207	TULP1 (ENSDLEG00000020208) #13	ENSDLEG00000020213	FKBP5 (ENSDLEG00000020215) #14	ARMC12 (ENSDLEG00000020217) #15	ENSDLEG00000020220 #18	LHFPL5 (ENSDLEG00000020223) #19	SRPK1 (ENSDLEG00000020227) #20	SLC26A8 (ENSDLEG00000020237) #21	ENSDLEG00000020262	MAPK14 (ENSDLEG00000020270) #22	MAPK13 (ENSDLEG00000020302) #24	BRPF3 (ENSDLEG00000020310) #25	PNPLA1 (ENSDLEG00000020311) #26	BNIP5 (ENSDLEG00000020312) #27	PXT1 (ENSDLEG00000020318) #30	KCTD20 (ENSDLEG00000020321) #31	STK38 (ENSDLEG00000020326) #32	ENSDLEG00000020337	ENSDLEG00000020340 #33	CDKN1A (ENSDLEG00000020343) #35	RAB44 (ENSDLEG00000020348) #36	CPNE5 (ENSDLEG00000020365) #37	PPIL1 (ENSDLEG00000020378)	CUNH6orf89 (ENSDLEG00000020383)	PI16 (ENSDLEG00000020389)
Sperm whale	MODERN SPECIES	9	UHRF1BP1 (ENSPCTG00005016279)	TAF11 (ENSPCTG00005016379)	ANKS1A (ENSPCTG00005016466)	TCP11 (ENSPCTG00005017060)	SCUBE3 (ENSPCTG00005017357)	ZNF76 (ENSPCTG00005017628) #7	DEF6 (ENSPCTG00005017738) #8	ENSPCTG00005017863 #14	ENSPCTG00005017905	ARMC12 (ENSPCTG00005017921) #15	CLPSL2 (ENSPCTG00005018045) #16	CLPS (ENSPCTG00005018156) #18	LHFPL5 (ENSPCTG00005018218) #19	SRPK1 (ENSPCTG00005018292) #20	SLC26A8 (ENSPCTG00005018826) #21	MAPK14 (ENSPCTG00005019201) #22	MAPK13 (ENSPCTG00005019360) #24	BRPF3 (ENSPCTG00005019447) #25	BNIP5 (ENSPCTG00005019549) #27	ENSPCTG00005019695 #29	PXT1 (ENSPCTG00005019772) #30	KCTD20 (ENSPCTG00005019825) #31	STK38 (ENSPCTG00005019925) #32	ENSPCTG00005019954	SRSF3 (ENSPCTG00005019964) #33	CDKN1A (ENSPCTG00005019987) #35	RAB44 (ENSPCTG00005020012) #36	PPIL1 (ENSPCTG00005020179)	C18H6orf89 (ENSPCTG00005020208)	PI16 (ENSPCTG00005020284)	MTCH1 (ENSPCTG00005020330)
Blue whale	MODERN SPECIES	2	PPARD (ENSBMSG00010009113) #9	FANCE (ENSBMSG00010009091) #10	ENSBMSG00010009079 #11	ENSBMSG00010009075	TEAD3 (ENSBMSG00010009054) #12	TULP1 (ENSBMSG00010008933) #13	ENSBMSG00010008887	FKBP5 (ENSBMSG00010008874) #14	ARMC12 (ENSBMSG00010008843) #15	CLPSL2 (ENSBMSG00010008833) #16	ENSBMSG00010008821 #17	CLPS (ENSBMSG00010008813) #18	LHFPL5 (ENSBMSG00010011861) #19	SRPK1 (ENSBMSG00010011826) #20	SLC26A8 (ENSBMSG00010011786) #21	MAPK14 (ENSBMSG00010011729) #22	MAPK13 (ENSBMSG00010011678) #24	BRPF3 (ENSBMSG00010011629) #25	PNPLA1 (ENSBMSG00010011594) #26	BNIP5 (ENSBMSG00010011563) #27	ENSBMSG00010011544 #29	PXT1 (ENSBMSG00010011530) #30	KCTD20 (ENSBMSG00010011513) #31	STK38 (ENSBMSG00010011501) #32	ENSBMSG00010011488 #33	ENSBMSG00010011478	CDKN1A (ENSBMSG00010011467) #35	RAB44 (ENSBMSG00010011436) #36	CPNE5 (ENSBMSG00010011395) #37	PPIL1 (ENSBMSG00010011368)	C6orf89 (ENSBMSG00010011343)
Pecora	ANCESTRAL SPECIES	21	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Yarkand deer	MODERN SPECIES	30	PPARD (ENSCHYG00000010282) #9	FANCE (ENSCHYG00000010773) #10	ENSCHYG00000010877 #11	TEAD3 (ENSCHYG00000010959) #12	ENSCHYG00000011053	TULP1 (ENSCHYG00000011134) #13	FKBP5 (ENSCHYG00000011694) #14	ENSCHYG00000011846	ARMC12 (ENSCHYG00000011862) #15	CLPSL2 (ENSCHYG00000011932) #16	CLPS (ENSCHYG00000011957) #18	LHFPL5 (ENSCHYG00000011995) #19	SRPK1 (ENSCHYG00000012088) #20	ENSCHYG00000012601	SLC26A8 (ENSCHYG00000012638) #21	MAPK14 (ENSCHYG00000012865) #22	BRPF3 (ENSCHYG00000013499) #25	PNPLA1 (ENSCHYG00000013841) #26	BNIP5 (ENSCHYG00000013972) #27	PXT1 (ENSCHYG00000014042) #30	KCTD20 (ENSCHYG00000014090) #31	STK38 (ENSCHYG00000014235) #32	ENSCHYG00000014380 #33	ENSCHYG00000014439	CDKN1A (ENSCHYG00000014465) #35	RAB44 (ENSCHYG00000014517) #36	CPNE5 (ENSCHYG00000014610) #37	ENSCHYG00000015165	C6orf89 (ENSCHYG00000015318)	ENSCHYG00000015560	MTCH1 (ENSCHYG00000015751)
Percora_a	ANCESTRAL SPECIES	12	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Siberian musk deer	DUPLICATION
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	87	ADAM22 (ENSMMSG00000005953)	SRI (ENSMMSG00000005792)	STEAP4 (ENSMMSG00000013499)	ENSMMSG00000013478	ENSMMSG00000013469	TEX47 (ENSMMSG00000013455)	ZNF804B (ENSMMSG00000013410)	ENSMMSG00000013389	STEAP2 (ENSMMSG00000013360)	CFAP69 (ENSMMSG00000013241)	FAM237B (ENSMMSG00000013227)	ENSMMSG00000013196	HUS1 (ENSMMSG00000013153)	ENSMMSG00000013117	TNS3 (ENSMMSG00000012959)	ENSMMSG00000012922 #22	IGFBP3 (ENSMMSG00000012894)	IGFBP1 (ENSMMSG00000012857)	CCDC201 (ENSMMSG00000012834)	ENSMMSG00000012807	ENSMMSG00000012795	RAMP3 (ENSMMSG00000012774)	ENSMMSG00000012722	TBRG4 (ENSMMSG00000012647)	ENSMMSG00000012593	CCM2 (ENSMMSG00000012406)	ENSMMSG00000012372	MYO1G (ENSMMSG00000012349)	PURB (ENSMMSG00000012313)	ENSMMSG00000012177	ENSMMSG00000012142
Siberian musk deer	MODERN SPECIES	211	PLK1 (ENSMMSG00000023479)	DCTN5 (ENSMMSG00000023471)	PALB2 (ENSMMSG00000023457)	NDUFAB1 (ENSMMSG00000023440)	UBFD1 (ENSMMSG00000023426)	EARS2 (ENSMMSG00000023408)	GGA2 (ENSMMSG00000023391)	ENSMMSG00000023379	COG7 (ENSMMSG00000023363)	SCNN1B (ENSMMSG00000023337)	SCNN1G (ENSMMSG00000023319)	USP31 (ENSMMSG00000023297)	HS3ST2 (ENSMMSG00000023289)	ENSMMSG00000023282	OTOA (ENSMMSG00000023246)	ENSMMSG00000023231 #22	IGSF6 (ENSMMSG00000023221)	METTL9 (ENSMMSG00000023206)	ENSMMSG00000023197	ENSMMSG00000023186	CDR2 (ENSMMSG00000023178)	POLR3E (ENSMMSG00000023084)	EEF2K (ENSMMSG00000023047)	SDR42E2 (ENSMMSG00000023027)	VWA3A (ENSMMSG00000022994)	MOSMO (ENSMMSG00000022980)	PDZD9 (ENSMMSG00000022972)	UQCRC2 (ENSMMSG00000022950)	ENSMMSG00000022523	ENSMMSG00000021906	CRYM (ENSMMSG00000021817)
Siberian musk deer	MODERN SPECIES	355	SCUBE3 (ENSMMSG00000023749)	ZNF76 (ENSMMSG00000023755) #7	DEF6 (ENSMMSG00000023768) #8	PPARD (ENSMMSG00000023777) #9	FANCE (ENSMMSG00000004572) #10	ENSMMSG00000004639 #11	TEAD3 (ENSMMSG00000004692) #12	TULP1 (ENSMMSG00000004824) #13	FKBP5 (ENSMMSG00000005251) #14	ARMC12 (ENSMMSG00000005327) #15	CLPSL2 (ENSMMSG00000005400) #16	CLPS (ENSMMSG00000005439) #18	LHFPL5 (ENSMMSG00000005472) #19	SRPK1 (ENSMMSG00000005523) #20	SLC26A8 (ENSMMSG00000005688) #21	ENSMMSG00000005760 #22	MAPK13 (ENSMMSG00000005909) #24	BRPF3 (ENSMMSG00000005977) #25	PNPLA1 (ENSMMSG00000006075) #26	ENSMMSG00000006105 #27	PXT1 (ENSMMSG00000006160) #30	ENSMMSG00000006191 #31	STK38 (ENSMMSG00000006251) #32	SRSF3 (ENSMMSG00000006324) #33	ENSMMSG00000006352	CDKN1A (ENSMMSG00000006370) #35	RAB44 (ENSMMSG00000006400) #36	CPNE5 (ENSMMSG00000006432) #37	PPIL1 (ENSMMSG00000006470)	C6orf89 (ENSMMSG00000006496)	PI16 (ENSMMSG00000006545)
Bovidae	ANCESTRAL SPECIES	13	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Caprinae	ANCESTRAL SPECIES	16	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f.l #11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b.a #32	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
Rambouillet Sheep	MODERN SPECIES	12	TCP11 (ENSOARG00020020829)	SCUBE3 (ENSOARG00020021445)	ZNF76 (ENSOARG00020021577) #7	DEF6 (ENSOARG00020021870) #8	PPARD (ENSOARG00020021914) #9	RPL10A (ENSOARG00020022050) #11	TEAD3 (ENSOARG00020022091) #12	TULP1 (ENSOARG00020022333) #13	FKBP5 (ENSOARG00020022803) #14	ARMC12 (ENSOARG00020022910) #15	CLPSL2 (ENSOARG00020022967) #16	CLPS (ENSOARG00020022993) #18	LHFPL5 (ENSOARG00020023020) #19	SRPK1 (ENSOARG00020023049) #20	SLC26A8 (ENSOARG00020023144) #21	MAPK14 (ENSOARG00020023336) #22	MAPK13 (ENSOARG00020023522) #24	BRPF3 (ENSOARG00020023590) #25	PNPLA1 (ENSOARG00020023718) #26	BNIP5 (ENSOARG00020023761) #27	PXT1 (ENSOARG00020023800) #30	KCTD20 (ENSOARG00020023831) #31	STK38 (ENSOARG00020023899) #32	SRSF3 (ENSOARG00020023931) #33	ENSOARG00020023940	CDKN1A (ENSOARG00020023947) #35	RAB44 (ENSOARG00020023968) #36	CPNE5 (ENSOARG00020023995) #37	PPIL1 (ENSOARG00020024082)	C6orf89 (ENSOARG00020024098)	PI16 (ENSOARG00020024129)
Goat	MODERN SPECIES	15	ZNF76 (ENSCHIG00000017284) #7	DEF6 (ENSCHIG00000015411) #8	PPARD (ENSCHIG00000013898) #9	ENSCHIG00000005328	FANCE (ENSCHIG00000024074) #10	ENSCHIG00000025943 #11	TEAD3 (ENSCHIG00000018959) #12	TULP1 (ENSCHIG00000018872) #13	FKBP5 (ENSCHIG00000014746) #14	ARMC12 (ENSCHIG00000003988) #15	CLPSL2 (ENSCHIG00000014897) #16	CLPS (ENSCHIG00000017423) #18	LHFPL5 (ENSCHIG00000011231) #19	SRPK1 (ENSCHIG00000014048) #20	SLC26A8 (ENSCHIG00000014807) #21	MAPK14 (ENSCHIG00000000509) #22	MAPK13 (ENSCHIG00000023563) #24	BRPF3 (ENSCHIG00000020726) #25	PNPLA1 (ENSCHIG00000020453) #26	BNIP5 (ENSCHIG00000024841) #27	PXT1 (ENSCHIG00000017213) #30	KCTD20 (ENSCHIG00000022727) #31	ENSCHIG00000010580 #32	ENSCHIG00000007771	ENSCHIG00000016239	SRSF3 (ENSCHIG00000009659) #33	ENSCHIG00000009800	CDKN1A (ENSCHIG00000006042) #35	RAB44 (ENSCHIG00000015827) #36	CPNE5 (ENSCHIG00000004157) #37	PPIL1 (ENSCHIG00000013923)
Bovinae	ANCESTRAL SPECIES	9	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000157353.qb.a	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a.y #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270
American bison	MODERN SPECIES	3186	DEF6 (ENSBBBG00000001527) #8	PPARD (ENSBBBG00000013721) #9	FANCE (ENSBBBG00000013719) #10	RPL10A (ENSBBBG00000013708) #11	TEAD3 (ENSBBBG00000013702) #12	ENSBBBG00000001536	TULP1 (ENSBBBG00000007695) #13	FKBP5 (ENSBBBG00000013674) #14	ARMC12 (ENSBBBG00000013631) #15	CLPSL2 (ENSBBBG00000002836) #16	CLPS (ENSBBBG00000008446) #18	LHFPL5 (ENSBBBG00000013611) #19	SRPK1 (ENSBBBG00000002827) #20	ENSBBBG00000013576	SLC26A8 (ENSBBBG00000013569) #21	MAPK14 (ENSBBBG00000013542) #22	MAPK13 (ENSBBBG00000013444) #24	BRPF3 (ENSBBBG00000013404) #25	PNPLA1 (ENSBBBG00000002712) #26	BNIP5 (ENSBBBG00000002706) #27	ENSBBBG00000001624	PXT1 (ENSBBBG00000002694) #30	KCTD20 (ENSBBBG00000013283) #31	ENSBBBG00000013264 #32	ENSBBBG00000013253	ENSBBBG00000001645	ENSBBBG00000002676 #33	ENSBBBG00000002674	CDKN1A (ENSBBBG00000013232) #35	ENSBBBG00000013221	RAB44 (ENSBBBG00000013215) #36
Bos	ANCESTRAL SPECIES	17	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000157353.qb.a	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a.x.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C.g	ENSGT00390000014270
Bos_a	ANCESTRAL SPECIES	11	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000010721.a.a.a.a.d	ENSGT00390000003561.n.a	ENSGT00910000144115.a.y #33	ENSGT00390000005569.x.a.b.a	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C.g
Wild yak	MODERN SPECIES	326															SLC26A8 (ENSBMUG00000013260) #21	MAPK14 (ENSBMUG00000013192) #22	MAPK13 (ENSBMUG00000013039) #24	BRPF3 (ENSBMUG00000012981) #25	PNPLA1 (ENSBMUG00000012843) #26	BNIP5 (ENSBMUG00000012819) #27	PXT1 (ENSBMUG00000012758) #30	KCTD20 (ENSBMUG00000012747) #31	STK38 (ENSBMUG00000012681) #32	ENSBMUG00000012659	ENSBMUG00000012641	ENSBMUG00000012637 #33	ENSBMUG00000012626	CDKN1A (ENSBMUG00000012606) #35	RAB44 (ENSBMUG00000012587) #36
Bos_b	ANCESTRAL SPECIES	8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.b.f #11	ENSGT00950000182956.b.b.b #12	ENSGT00510000046986.x.b.a	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000157353.qb.a	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h.h.b #32	ENSGT00390000010721.a.a.a.a.d	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C.g	ENSGT00390000014270	ENSGT00940000162458	ENSGT00390000000020.a
Hybrid Bos Indicus	MODERN SPECIES	15	ENSBIXG00005011861	FANCE (ENSBIXG00005011844) #10	RPL10A (ENSBIXG00005011822) #11	TEAD3 (ENSBIXG00005011795) #12	ENSBIXG00005001162	TULP1 (ENSBIXG00005011734) #13	FKBP5 (ENSBIXG00005011681) #14	ARMC12 (ENSBIXG00005011622) #15	CLPSL2 (ENSBIXG00005005817) #16	CLPS (ENSBIXG00005011581) #18	LHFPL5 (ENSBIXG00005001127) #19	SRPK1 (ENSBIXG00005011520) #20	ENSBIXG00005011420	SLC26A8 (ENSBIXG00005011403) #21	ENSBIXG00005011388	MAPK14 (ENSBIXG00005011345) #22	ENSBIXG00005001043	ENSBIXG00005011211	BRPF3 (ENSBIXG00005011188) #25	PNPLA1 (ENSBIXG00005011110) #26	BNIP5 (ENSBIXG00005011093) #27	PXT1 (ENSBIXG00005011069) #30	KCTD20 (ENSBIXG00005011051) #31	STK38 (ENSBIXG00005001003) #32	ENSBIXG00005000997	SRSF3 (ENSBIXG00005010999) #33	ENSBIXG00005010978	CDKN1A (ENSBIXG00005010949) #35	RAB44 (ENSBIXG00005000585) #36	CPNE5 (ENSBIXG00005010889) #37	ENSBIXG00005006778
Cow	MODERN SPECIES	15	DEF6 (ENSBTAG00000025622) #8	PPARD (ENSBTAG00000017542) #9	FANCE (ENSBTAG00000019492) #10	RPL10A (ENSBTAG00000019494) #11	TEAD3 (ENSBTAG00000019495) #12	ENSBTAG00000053636	TULP1 (ENSBTAG00000034287) #13	FKBP5 (ENSBTAG00000047502) #14	ARMC12 (ENSBTAG00000010877) #15	CLPSL2 (ENSBTAG00000048447) #16	CLPS (ENSBTAG00000016833) #18	LHFPL5 (ENSBTAG00000016834) #19	SRPK1 (ENSBTAG00000016838) #20	ENSBTAG00000046180	SLC26A8 (ENSBTAG00000017251) #21	MAPK14 (ENSBTAG00000020783) #22	MAPK13 (ENSBTAG00000010007) #24	BRPF3 (ENSBTAG00000013316) #25	PNPLA1 (ENSBTAG00000015118) #26	BNIP5 (ENSBTAG00000017617) #27	ENSBTAG00000052568	PXT1 (ENSBTAG00000053750) #30	KCTD20 (ENSBTAG00000020595) #31	STK38 (ENSBTAG00000011126) #32	ENSBTAG00000004219	SRSF3 (ENSBTAG00000040006) #33	RPS4Y1 (ENSBTAG00000025617)	CDKN1A (ENSBTAG00000008353) #35	ENSBTAG00000045551	RAB44 (ENSBTAG00000050445) #36	CPNE5 (ENSBTAG00000007514) #37
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00390000008767.a.a.a.a ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Xenarthra	ANCESTRAL SPECIES	246					ENSGT00940000156676 #9	ENSGT00390000008767.a.a.b ##11	ENSGT00950000182956.a ##12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26
Armadillo	MODERN SPECIES	1545					PPARD (ENSDNOG00000038434) #9	RPL10A (ENSDNOG00000046031) ##11	ENSDNOG00000023623 ##12	TULP1 (ENSDNOG00000047278) #13	FKBP5 (ENSDNOG00000004678) #14	ARMC12 (ENSDNOG00000035258) #15	ENSDNOG00000040414 #16	CLPS (ENSDNOG00000044882) #18	LHFPL5 (ENSDNOG00000043114) #19	SRPK1 (ENSDNOG00000015578) #20	SLC26A8 (ENSDNOG00000015584) #21	MAPK14 (ENSDNOG00000032651) #22	MAPK13 (ENSDNOG00000033496) #24	BRPF3 (ENSDNOG00000009698) #25	PNPLA1 (ENSDNOG00000032712) #26
Sloth	MODERN SPECIES	1161																MAPK14 (ENSCHOG00000006861) #22
Afrotheria	ANCESTRAL SPECIES	24									ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Tenrec	MODERN SPECIES	1377																MAPK14 (ENSETEG00000019565) #22	ENSETEG00000019567
Afrotheria_a	ANCESTRAL SPECIES	23									ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000011494 #16	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000012893 #30	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000162458
Elephant	MODERN SPECIES	1								ENSLAFG00000031139	FKBP5 (ENSLAFG00000004217) #14	ARMC12 (ENSLAFG00000032578) #15	ENSLAFG00000000454 #16	CLPS (ENSLAFG00000023029) #18	LHFPL5 (ENSLAFG00000000101) #19	SRPK1 (ENSLAFG00000000102) #20	SLC26A8 (ENSLAFG00000005125) #21	MAPK14 (ENSLAFG00000005132) #22	MAPK13 (ENSLAFG00000005137) #24	ENSLAFG00000027631	BRPF3 (ENSLAFG00000021668) #25	PNPLA1 (ENSLAFG00000009711) #26	BNIP5 (ENSLAFG00000009715) #27	ETV7 (ENSLAFG00000003568) #29	PXT1 (ENSLAFG00000029685) #30	KCTD20 (ENSLAFG00000005607) #31	STK38 (ENSLAFG00000005611) #32	ENSLAFG00000018193 #33	CDKN1A (ENSLAFG00000009778) #35	ENSLAFG00000000202 #36	ENSLAFG00000028599	CPNE5 (ENSLAFG00000000204) #37	PPIL1 (ENSLAFG00000028161)
Hyrax	MODERN SPECIES	1057															SLC26A8 (ENSPCAG00000016221) #21	MAPK14 (ENSPCAG00000016343) #22	MAPK13 (ENSPCAG00000016392) #24
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.b ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000163908	ENSGT00390000000020.a
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.b ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000163908	ENSGT00390000000020.a
Diprotodontia	ANCESTRAL SPECIES	44	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.b ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000163908	ENSGT00390000000020.a
Diprotodontia_a	ANCESTRAL SPECIES	49	ENSGT00940000160792	ENSGT00940000153185.a.a.b	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.b ##11	ENSGT00950000182956.b.b.b #12	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160828 #26	ENSGT00390000001176 #27	ENSGT00940000162211 #29	ENSGT00390000007975.b #31	ENSGT00940000153544.a.h #32	ENSGT00910000144115.a #33	ENSGT00940000159918.a.b #35	ENSGT00940000160379 #36	ENSGT00940000156194 #37	ENSGT00940000153189.C	ENSGT00390000014270	ENSGT00940000163908	ENSGT00390000000020.a.a
Common wonbat	MODERN SPECIES	1047	ENSVURG00010018884	ENSVURG00010018893	ZNF76 (ENSVURG00010018901) #7	DEF6 (ENSVURG00010018912) #8	PPARD (ENSVURG00010018918) #9	ENSVURG00010018922	ENSVURG00010018929 #10	RPL10A (ENSVURG00010018942) ##11	TEAD3 (ENSVURG00010018988) #12	ENSVURG00010019006	FKBP5 (ENSVURG00010019051) #14	CLPS (ENSVURG00010019069) #18	LHFPL5 (ENSVURG00010019075) #19	SRPK1 (ENSVURG00010019087) #20	SLC26A8 (ENSVURG00010019133) #21	MAPK14 (ENSVURG00010019236) #22	MAPK13 (ENSVURG00010019265) #24	BRPF3 (ENSVURG00010019287) #25	PNPLA1 (ENSVURG00010019313) #26	ENSVURG00010019331 #27	ETV7 (ENSVURG00010019335) #29	KCTD20 (ENSVURG00010019344) #31	STK38 (ENSVURG00010019351) #32	SRSF3 (ENSVURG00010019365) #33	CDKN1A (ENSVURG00010019395) #35	ENSVURG00010019378 #36	CPNE5 (ENSVURG00010019407) #37	ENSVURG00010019436	ENSVURG00010019439	ENSVURG00010019449	FGD2 (ENSVURG00010019509)
koala	MODERN SPECIES	76	ENSPCIG00000012637	SCUBE3 (ENSPCIG00000003800)	ZNF76 (ENSPCIG00000021233) #7	DEF6 (ENSPCIG00000021237) #8	PPARD (ENSPCIG00000021240) #9	ENSPCIG00000021244	ENSPCIG00000021248 #10	ENSPCIG00000021251 ##11	TEAD3 (ENSPCIG00000021255) #12	FKBP5 (ENSPCIG00000021261) #14	ARMC12 (ENSPCIG00000030892) #15	CLPS (ENSPCIG00000021270) #18	LHFPL5 (ENSPCIG00000021272) #19	SRPK1 (ENSPCIG00000021278) #20	ENSPCIG00000021291 #21	MAPK14 (ENSPCIG00000021301) #22	MAPK13 (ENSPCIG00000021308) #24	ENSPCIG00000021314 #25	ENSPCIG00000032311 #25	ENSPCIG00000021319 #26	ENSPCIG00000021323 #27	ETV7 (ENSPCIG00000021325) #29	KCTD20 (ENSPCIG00000021330) #31	STK38 (ENSPCIG00000021332) #32	ENSPCIG00000021335 #33	CDKN1A (ENSPCIG00000021337) #35	ENSPCIG00000030790 #36	ENSPCIG00000021340	CPNE5 (ENSPCIG00000021342) #37	PPIL1 (ENSPCIG00000021347)	ENSPCIG00000021350
Wallaby	MODERN SPECIES	2078																MAPK14 (ENSMEUG00000010511) #22
Tasmanian devil	MODERN SPECIES	3	ANKS1A (ENSSHAG00000006146)	ENSSHAG00000007929	SCUBE3 (ENSSHAG00000009564)	ENSSHAG00000010104 #7	PPARD (ENSSHAG00000027880) #9	ENSSHAG00000011018 #10	RPL10A (ENSSHAG00000030402) ##11	TEAD3 (ENSSHAG00000011218) #12	TULP1 (ENSSHAG00000011434) #13	FKBP5 (ENSSHAG00000011819) #14	ARMC12 (ENSSHAG00000012640) #15	CLPS (ENSSHAG00000029496) #18	LHFPL5 (ENSSHAG00000012839) #19	SRPK1 (ENSSHAG00000030643) #20	ENSSHAG00000012955 #21	MAPK14 (ENSSHAG00000001726) #22	MAPK13 (ENSSHAG00000005652) #24	BRPF3 (ENSSHAG00000006679) #25	PNPLA1 (ENSSHAG00000026837) #26	ETV7 (ENSSHAG00000008985) #29	KCTD20 (ENSSHAG00000009892) #31	STK38 (ENSSHAG00000010192) #32	SRSF3 (ENSSHAG00000028024) #33	CDKN1A (ENSSHAG00000027220) #35	ENSSHAG00000030398 #36	CPNE5 (ENSSHAG00000012120) #37	PPIL1 (ENSSHAG00000029952)	ENSSHAG00000013471	ENSSHAG00000013929	ENSSHAG00000001057	ENSSHAG00000022544
Opossum	MODERN SPECIES	1	DEF6 (ENSMODG00000013789) #8	PPARD (ENSMODG00000013778) #9	ENSMODG00000050582	ENSMODG00000013771 #10	ENSMODG00000013766 ##11	TEAD3 (ENSMODG00000013762) #12	TULP1 (ENSMODG00000013758) #13	FKBP5 (ENSMODG00000013757) #14	ARMC12 (ENSMODG00000013752) #15	CLPS (ENSMODG00000013747) #18	ENSMODG00000046296	ENSMODG00000028226	LHFPL5 (ENSMODG00000013743) #19	SRPK1 (ENSMODG00000013740) #20	ENSMODG00000013715 #21	MAPK14 (ENSMODG00000013704) #22	MAPK13 (ENSMODG00000013669) #24	BRPF3 (ENSMODG00000013652) #25	ENSMODG00000023723	ENSMODG00000013624	PNPLA1 (ENSMODG00000013586) #26	ENSMODG00000031755 #27	ETV7 (ENSMODG00000013561) #29	ENSMODG00000048529	KCTD20 (ENSMODG00000013553) #31	ENSMODG00000013550 ##32	SRSF3 (ENSMODG00000013539) #33	CDKN1A (ENSMODG00000013527) #35	ENSMODG00000038495 #36	ENSMODG00000023720	CPNE5 (ENSMODG00000013517) #37
Sauria	ANCESTRAL SPECIES	24	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00940000177211	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00440000033504.C	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33
Lepidosauria	ANCESTRAL SPECIES	56	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.c.a #11	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00940000169569	ENSGT00940000153544.a #32
Episquamata	ANCESTRAL SPECIES	1	ENSGT00390000011228.a	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650	ENSGT00940000158289.b	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856.d #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00390000003856.c #15	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00940000169569
Laterata	ANCESTRAL SPECIES	3	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650	ENSGT00940000158289.b	ENSGT00940000160828.b #26	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856.d #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00390000003856.c #15	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00940000169569
Common wall lizard	MODERN SPECIES	14	INAVA (ENSPMRG00000012969)	KIF21B (ENSPMRG00000013168)	CACNA1S (ENSPMRG00000015008)	ENSPMRG00000015109 #26	RPL10A (ENSPMRG00000015118) #11	ENSPMRG00000015124	MICAL1 (ENSPMRG00000015132)	SMPD2 (ENSPMRG00000015145)	TEAD3 (ENSPMRG00000015154) #12	TULP1 (ENSPMRG00000015179) #13	FKBP5 (ENSPMRG00000015186) #14	ENSPMRG00000015188 #15	CLPS (ENSPMRG00000015194) #18	LHFPL5 (ENSPMRG00000015196) #19	SRPK1 (ENSPMRG00000015202) #20	MAPK14 (ENSPMRG00000015221) #22	MAPK13 (ENSPMRG00000015235) #24	BRPF3 (ENSPMRG00000015249) #25	ENSPMRG00000015264 #15	ENSPMRG00000015269	ENSPMRG00000015278	TBC1D22B (ENSPMRG00000015283)	ENSPMRG00000015292	PIM1 (ENSPMRG00000007119)	ENSPMRG00000007126	FGD2 (ENSPMRG00000007131)	MTCH1 (ENSPMRG00000007144)	ENSPMRG00000007156	C6orf89 (ENSPMRG00000007169)	ENSPMRG00000007177 #36	CDKN1A (ENSPMRG00000007192) #35
Argentine black and white tegu	MODERN SPECIES	16	GPR25 (ENSSMRG00000018501)	INAVA (ENSSMRG00000018506)	KIF21B (ENSSMRG00000018511)	CACNA1S (ENSSMRG00000018566)	ENSSMRG00000020955 #26	RPL10A (ENSSMRG00000020986) #11	MICAL1 (ENSSMRG00000020988)	SMPD2 (ENSSMRG00000020989)	TEAD3 (ENSSMRG00000020990) #12	TULP1 (ENSSMRG00000020993) #13	FKBP5 (ENSSMRG00000020995) #14	ENSSMRG00000020996 #15	CLPS (ENSSMRG00000020997) #18	LHFPL5 (ENSSMRG00000020998) #19	SRPK1 (ENSSMRG00000020999) #20	MAPK14 (ENSSMRG00000021000) #22	MAPK13 (ENSSMRG00000021001) #24	BRPF3 (ENSSMRG00000021002) #25	ENSSMRG00000021003 #15	ENSSMRG00000021004	TBC1D22B (ENSSMRG00000021005)	ENSSMRG00000021007	PIM1 (ENSSMRG00000021008)	ENSSMRG00000021011	MTCH1 (ENSSMRG00000021012)	ENSSMRG00000021013	C6orf89 (ENSSMRG00000021014)	CDKN1A (ENSSMRG00000021015) #35	SRSF3 (ENSSMRG00000021016) #33	ENSSMRG00000021017	STK38 (ENSSMRG00000021018) #32
Toxicofera	ANCESTRAL SPECIES	1	ENSGT00940000158289.b	ENSGT00940000160828.a #26	ENSGT00940000160828.b #26	ENSGT00390000008767.d #11	ENSGT00530000063722.a	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856.d #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00390000003856.c #15	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00940000153544.a #32
Elapidae	ANCESTRAL SPECIES	1	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856.d #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.w.a #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00390000003856.c #15	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b.a.a #35	ENSGT00910000144115.a #33	ENSGT00940000153544.a #32
Indian cobra	MODERN SPECIES	2	GPR25 (ENSNNAG00000001890)	INAVA (ENSNNAG00000001871)	KIF21B (ENSNNAG00000001805)	CACNA1S (ENSNNAG00000001249)	RPL10A (ENSNNAG00000001002) #11	ENSNNAG00000000980	MICAL1 (ENSNNAG00000000949)	SMPD2 (ENSNNAG00000000919)	TEAD3 (ENSNNAG00000000891) #12	TULP1 (ENSNNAG00000000865) #13	FKBP5 (ENSNNAG00000000845) #14	ENSNNAG00000000827 #15	CLPS (ENSNNAG00000000818) #18	LHFPL5 (ENSNNAG00000000807) #19	SRPK1 (ENSNNAG00000000790) #20	MAPK14 (ENSNNAG00000000753) #22	MAPK13 (ENSNNAG00000010534) #24	ENSNNAG00000010485 #25	ENSNNAG00000010449 #25	ENSNNAG00000010382 #15	ENSNNAG00000010325	TBC1D22B (ENSNNAG00000010249)	ENSNNAG00000010220	PIM1 (ENSNNAG00000010189)	FGD2 (ENSNNAG00000010112)	MTCH1 (ENSNNAG00000010074)	ENSNNAG00000010033	C6orf89 (ENSNNAG00000010010)	ENSNNAG00000009880 #36	CDKN1A (ENSNNAG00000009861) #35	SRSF3 (ENSNNAG00000009830) #33
Elapidae_a	ANCESTRAL SPECIES	57	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00950000185408	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856.d #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.w.a #20	ENSGT00940000155325 #22	ENSGT00940000159584.a #24	ENSGT00940000159584.b #24	ENSGT00940000155056 #25	ENSGT00390000003856.c #15	ENSGT00940000160682.a.h	ENSGT00940000160682.a.g	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270	ENSGT00940000159918.a.b.a.a #35	ENSGT00910000144115.a #33
Acanthophiinae	ANCESTRAL SPECIES	5	ENSGT00940000162196.l	ENSGT01050000244888.a.b	ENSGT00940000154102.a	ENSGT00940000159650.o	ENSGT00940000158289.b	ENSGT00390000008767.d #11	ENSGT00940000159117.h	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856.d #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.w.a #20	ENSGT00940000155325 #22	ENSGT00940000159584.a #24	ENSGT00940000155056 #25	ENSGT00390000003856.c #15	ENSGT00940000160682.a.g.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a.x.a	ENSGT00950000185014	ENSGT00390000014270	ENSGT00940000159918.a.b.a.a #35	ENSGT00910000144115.a #33	ENSGT00940000153544.a.a #32	ENSGT00390000007975.b #31
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	102	ENSPTXG00000008760	ENSPTXG00000008759	ENSPTXG00000008758	ENSPTXG00000008756	ENSPTXG00000007819	ENSPTXG00000007793 #11	ENSPTXG00000007786	ENSPTXG00000007782	ENSPTXG00000007772 #12	ENSPTXG00000007767 #13	ENSPTXG00000007758 #14	ENSPTXG00000007757 #15	ENSPTXG00000007748 #18	ENSPTXG00000007746 #19	ENSPTXG00000007745 #20	ENSPTXG00000007743 #22	ENSPTXG00000007741 #24	ENSPTXG00000007739 #25	ENSPTXG00000007734 #15	ENSPTXG00000007731	ENSPTXG00000007727	ENSPTXG00000010687	ENSPTXG00000010683	ENSPTXG00000010682	ENSPTXG00000010592	ENSPTXG00000010590	ENSPTXG00000010586	ENSPTXG00000010584	ENSPTXG00000010583 #35	ENSPTXG00000010582 #33	ENSPTXG00000010581 #32
Eastern brown snake	MODERN SPECIES	88	ENSPTXG00000018498	ENSPTXG00000018496	ENSPTXG00000018492	ENSPTXG00000018491	ENSPTXG00000014985	ENSPTXG00000014966 #11	ENSPTXG00000014964	ENSPTXG00000014963	ENSPTXG00000014962 #12	ENSPTXG00000019193 #13	ENSPTXG00000019192 #14	ENSPTXG00000019190 #15	ENSPTXG00000019189 #18	ENSPTXG00000019188 #19	ENSPTXG00000019186 #20	ENSPTXG00000019183 #22	ENSPTXG00000019180 #24	ENSPTXG00000019178 #25	ENSPTXG00000019175 #15	ENSPTXG00000019173	ENSPTXG00000019171	ENSPTXG00000019169	ENSPTXG00000019168	ENSPTXG00000019165	ENSPTXG00000019161	ENSPTXG00000019157	ENSPTXG00000019155	ENSPTXG00000019154 #35	ENSPTXG00000019152 #33	ENSPTXG00000019150 #32	ENSPTXG00000019149 #31
Mainland tiger snake	DUPLICATION
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	95	ENSNSUG00000014598	ENSNSUG00000014597	ENSNSUG00000014596	ENSNSUG00000014595	ENSNSUG00000014594 #11	ENSNSUG00000014593	ENSNSUG00000014592	ENSNSUG00000014591 #12	ENSNSUG00000014590 #13	ENSNSUG00000014589 #14	ENSNSUG00000014587 #15	ENSNSUG00000014586 #18	ENSNSUG00000014585 #19	ENSNSUG00000014584 #20	ENSNSUG00000014583 #20	ENSNSUG00000014582 #22	ENSNSUG00000014581 #22	ENSNSUG00000014580 #24	ENSNSUG00000014579 #25	ENSNSUG00000014578 #25	ENSNSUG00000014577 #15	ENSNSUG00000014576	ENSNSUG00000014530	ENSNSUG00000014527	ENSNSUG00000014516	ENSNSUG00000014514	ENSNSUG00000014512	ENSNSUG00000014496	ENSNSUG00000014494	ENSNSUG00000014493 #35	ENSNSUG00000014491 #33
Mainland tiger snake	MODERN SPECIES	95	ENSNSUG00000014597	ENSNSUG00000014596	ENSNSUG00000014595	ENSNSUG00000014594 #11	ENSNSUG00000014593	ENSNSUG00000014592	ENSNSUG00000014591 #12	ENSNSUG00000014590 #13	ENSNSUG00000014589 #14	ENSNSUG00000014587 #15	ENSNSUG00000014586 #18	ENSNSUG00000014585 #19	ENSNSUG00000014584 #20	ENSNSUG00000014583 #20	ENSNSUG00000014582 #22	ENSNSUG00000014581 #22	ENSNSUG00000014580 #24	ENSNSUG00000014579 #25	ENSNSUG00000014578 #25	ENSNSUG00000014577 #15	ENSNSUG00000014576	ENSNSUG00000014530	ENSNSUG00000014527	ENSNSUG00000014516	ENSNSUG00000014514	ENSNSUG00000014512	ENSNSUG00000014496	ENSNSUG00000014494	ENSNSUG00000014493 #35	ENSNSUG00000014491 #33	ENSNSUG00000014490 #32
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	97	ENSNSUG00000001096	ENSNSUG00000001097	ENSNSUG00000001158 #11	ENSNSUG00000001162	ENSNSUG00000001163	ENSNSUG00000001165	ENSNSUG00000001172 #12	ENSNSUG00000001269 #13	ENSNSUG00000001273 #14	ENSNSUG00000001297 #15	ENSNSUG00000001301 #18	ENSNSUG00000001316 #19	ENSNSUG00000001318 #20	ENSNSUG00000001357 #20	ENSNSUG00000001438 #22	ENSNSUG00000001439 #22	ENSNSUG00000001441 #24	ENSNSUG00000001456 #25	ENSNSUG00000001465 #25	ENSNSUG00000001467 #15	ENSNSUG00000001472	ENSNSUG00000001482	ENSNSUG00000001795	ENSNSUG00000001796	ENSNSUG00000001828	ENSNSUG00000001890	ENSNSUG00000001912	ENSNSUG00000001914	ENSNSUG00000001918 #35	ENSNSUG00000001922 #33	ENSNSUG00000001925 #32
Mainland tiger snake	MODERN SPECIES	97	ENSNSUG00000001091	ENSNSUG00000001096	ENSNSUG00000001097	ENSNSUG00000001158 #11	ENSNSUG00000001162	ENSNSUG00000001163	ENSNSUG00000001165	ENSNSUG00000001172 #12	ENSNSUG00000001269 #13	ENSNSUG00000001273 #14	ENSNSUG00000001297 #15	ENSNSUG00000001301 #18	ENSNSUG00000001316 #19	ENSNSUG00000001318 #20	ENSNSUG00000001357 #20	ENSNSUG00000001438 #22	ENSNSUG00000001439 #22	ENSNSUG00000001441 #24	ENSNSUG00000001456 #25	ENSNSUG00000001465 #25	ENSNSUG00000001467 #15	ENSNSUG00000001472	ENSNSUG00000001482	ENSNSUG00000001795	ENSNSUG00000001796	ENSNSUG00000001828	ENSNSUG00000001890	ENSNSUG00000001912	ENSNSUG00000001914	ENSNSUG00000001918 #35	ENSNSUG00000001922 #33
Blue-lipped sea krait	MODERN SPECIES	9798																MAPK14 (ENSLLTG00000009996) #22	ENSLLTG00000010360 #24
Lizard	MODERN SPECIES	995									TULP1 (ENSACAG00000017155) #13	FKBP5 (ENSACAG00000017117) #14	ENSACAG00000017112 #15	ENSACAG00000045355	CLPS (ENSACAG00000025808) #18	LHFPL5 (ENSACAG00000017100) #19	SRPK1 (ENSACAG00000017021) #20	MAPK14 (ENSACAG00000016966) #22	MAPK13 (ENSACAG00000016916) #24	BRPF3 (ENSACAG00000016890) #25	ENSACAG00000016889 #15	ENSACAG00000036457	ENSACAG00000038379	TBC1D22B (ENSACAG00000016791)	ENSACAG00000040534	PIM1 (ENSACAG00000016764)	FGD2 (ENSACAG00000016704)
tuatara	MODERN SPECIES	943					ENSSPUG00000011123	MLN (ENSSPUG00000011091)	LEMD2 (ENSSPUG00000011077)	IP6K3 (ENSSPUG00000011063)	ENSSPUG00000011057	BAK1 (ENSSPUG00000010867)	UNC5CL (ENSSPUG00000010858)	TSPO2 (ENSSPUG00000010848)	APOBEC2 (ENSSPUG00000010839)	OARD1 (ENSSPUG00000010828)	NFYA (ENSSPUG00000010813)	MAPK14 (ENSSPUG00000010797) #22	MAPK13 (ENSSPUG00000010741) #24	BRPF3 (ENSSPUG00000010698) #25	ENSSPUG00000010679	TBC1D22B (ENSSPUG00000010671)	PIM1 (ENSSPUG00000010649)	FGD2 (ENSSPUG00000010608)	MTCH1 (ENSSPUG00000010582)	ENSSPUG00000010553	C6orf89 (ENSSPUG00000010515)	ENSSPUG00000010462	CDKN1A (ENSSPUG00000010441) #35	SRSF3 (ENSSPUG00000010430) #33	STK38 (ENSSPUG00000010406) #32	KCTD20 (ENSSPUG00000010385) #31	ETV7 (ENSSPUG00000010373) #29
Archelosauria	ANCESTRAL SPECIES	22	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00960000189982	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00440000033504.C	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33
Cryptodira	ANCESTRAL SPECIES	27	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00960000189982	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695	ENSGT00940000153544.a #32
Testudinoidea	ANCESTRAL SPECIES	22	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00960000189982	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472.n	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695	ENSGT00940000153544.a #32
Testudinidae	ANCESTRAL SPECIES	26	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00960000189982	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472.n	ENSGT00940000169704	ENSGT00940000153394.c.a.h.m	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00940000153544.a #32	ENSGT00390000007975.b #31
Goode s thornscrub tortoise	MODERN SPECIES	18	PPARD (ENSGEVG00005001704) #9	ENSGEVG00005001677	FANCE (ENSGEVG00005001655) #10	ENSGEVG00005001625	MICAL1 (ENSGEVG00005001597)	SMPD2 (ENSGEVG00005001556)	TEAD3 (ENSGEVG00005001512) #12	TULP1 (ENSGEVG00005001442) #13	FKBP5 (ENSGEVG00005001393) #14	ENSGEVG00005001377	ARMC12 (ENSGEVG00005001362) #15	CLPS (ENSGEVG00005001342) #18	LHFPL5 (ENSGEVG00005001336) #19	SRPK1 (ENSGEVG00005001288) #20	SLC26A8 (ENSGEVG00005001226) #21	MAPK14 (ENSGEVG00005001172) #22	MAPK13 (ENSGEVG00005001082) #24	BRPF3 (ENSGEVG00005001003) #25	ENSGEVG00005000974	ENSGEVG00005000953	TBC1D22B (ENSGEVG00005000931)	ENSGEVG00005000903	ENSGEVG00005000885	FGD2 (ENSGEVG00005000800)	MTCH1 (ENSGEVG00005000744)	ENSGEVG00005000717	C6orf89 (ENSGEVG00005000656)	ENSGEVG00005000621 #36	ENSGEVG00005000594	CDKN1A (ENSGEVG00005000580) #35	SRSF3 (ENSGEVG00005000564) #33
Abingdon island giant tortoise	MODERN SPECIES	2299											ENSCABG00000007905	ENSCABG00000007903	LHFPL5 (ENSCABG00000007901) #19	SRPK1 (ENSCABG00000007852) #20	SLC26A8 (ENSCABG00000007846) #21	MAPK14 (ENSCABG00000007369) #22	MAPK13 (ENSCABG00000007357) #24	BRPF3 (ENSCABG00000007112) #25	ENSCABG00000007102	TBC1D22B (ENSCABG00000007101)	ENSCABG00000007100	ENSCABG00000007099	FGD2 (ENSCABG00000007064)	MTCH1 (ENSCABG00000007052)	ENSCABG00000007033	C6orf89 (ENSCABG00000007031)	CDKN1A (ENSCABG00000007029) #35	SRSF3 (ENSCABG00000007025) #33	STK38 (ENSCABG00000006649) #32	ENSCABG00000006647	ENSCABG00000006646
Emydidae	ANCESTRAL SPECIES	25	ENSGT00940000160911.e #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472.n
Three-toed box turtle	MODERN SPECIES	292	SCUBE3 (ENSTMTG00000013641)	ENSTMTG00000014268 #11	ZNF76 (ENSTMTG00000014283) #7	DEF6 (ENSTMTG00000014316) #8	PPARD (ENSTMTG00000014341) #9	FANCE (ENSTMTG00000014360) #10	MICAL1 (ENSTMTG00000014404)	SMPD2 (ENSTMTG00000014566)	TEAD3 (ENSTMTG00000014589) #12	TULP1 (ENSTMTG00000014610) #13	FKBP5 (ENSTMTG00000014634) #14	ARMC12 (ENSTMTG00000014658) #15	CLPS (ENSTMTG00000014678) #18	LHFPL5 (ENSTMTG00000014693) #19	SRPK1 (ENSTMTG00000014706) #20	MAPK14 (ENSTMTG00000014739) #22	ENSTMTG00000014782 #24	ENSTMTG00000014797 #24	BRPF3 (ENSTMTG00000014807) #25	ENSTMTG00000003330	ENSTMTG00000003347
painted turtle	MODERN SPECIES	881										CCDC12 (ENSCPBG00000015804)	NBEAL2 (ENSCPBG00000015788)	ENSCPBG00000015783	NARS2 (ENSCPBG00000015777)	ENSCPBG00000015775	TENM4 (ENSCPBG00000008927)	MAPK14 (ENSCPBG00000007963) #22	MAPK13 (ENSCPBG00000007701) #24	ENSCPBG00000007675	BRPF3 (ENSCPBG00000007668) #25
Chinese turtle	MODERN SPECIES	500	ZNF76 (ENSPSIG00000005652) #7	DEF6 (ENSPSIG00000005828) #8	PPARD (ENSPSIG00000005889) #9	FANCE (ENSPSIG00000005927) #10	ENSPSIG00000005941	MICAL1 (ENSPSIG00000005964)	SMPD2 (ENSPSIG00000006110)	TEAD3 (ENSPSIG00000006176) #12	TULP1 (ENSPSIG00000006186) #13	FKBP5 (ENSPSIG00000006195) #14	ARMC12 (ENSPSIG00000006267) #15	CLPS (ENSPSIG00000006319) #18	LHFPL5 (ENSPSIG00000006348) #19	SRPK1 (ENSPSIG00000006364) #20	SLC26A8 (ENSPSIG00000006559) #21	MAPK14 (ENSPSIG00000006647) #22	MAPK13 (ENSPSIG00000006732) #24	BRPF3 (ENSPSIG00000006906) #25	ENSPSIG00000006910	SHISA4 (ENSPSIG00000006913)	INAVA (ENSPSIG00000006943)	ENSPSIG00000006947	ENSPSIG00000006984	ENSPSIG00000006989	PKP1 (ENSPSIG00000007049)	TNNT2 (ENSPSIG00000007199)	ENSPSIG00000007313	TNNI1 (ENSPSIG00000007323)	CSRP1 (ENSPSIG00000007394)	ENSPSIG00000000048	PPP1R12B (ENSPSIG00000007681)
Archosauria	ANCESTRAL SPECIES	23	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767.d #11	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a	ENSGT00940000169704	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695
Aves	ANCESTRAL SPECIES	25	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.h	ENSGT00940000153394.c.a.g.a	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695	ENSGT00940000153544.a #32
Neognathae	ANCESTRAL SPECIES	24	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.h	ENSGT00940000153394.c.a.g.a.a.b	ENSGT00940000153394.c.a.g.a.b	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695
Galloanserae	ANCESTRAL SPECIES	28	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000153832.e.a	ENSGT00940000158289.b	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00940000155199	ENSGT00390000016889
Phasianidae	ANCESTRAL SPECIES	22							ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.v #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000158289.b	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00920000149095.a	ENSGT00630000089917	ENSGT00940000158255
Phasianidae_b	ANCESTRAL SPECIES	22							ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264.v #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000158289.b	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00920000149095.a	ENSGT00630000089917	ENSGT00940000158255
Turkey	DUPLICATION
Turkey	MODERN SPECIES	20	ENSMGAG00000001270	ENSMGAG00000001297	ENSMGAG00000001214	ENSMGAG00000001115	ENSMGAG00000001091	ENSMGAG00000001081	ENSMGAG00000021572	ENSMGAG00000022162	ENSMGAG00000000968	ENSMGAG00000000895	ENSMGAG00000000891	BRPF3 (ENSMGAG00000000829) #25	ENSMGAG00000000875	ENSMGAG00000000790 #22	ENSMGAG00000000797 #24	ENSMGAG00000019683 #22	SLC26A8 (ENSMGAG00000000733) #21	ENSMGAG00000000715 #20	ENSMGAG00000000709 #19	ENSMGAG00000019486 #20	CLPS (ENSMGAG00000000703) #18	ENSMGAG00000000691 #14	ENSMGAG00000000682 #13	ENSMGAG00000000674 #12	ENSMGAG00000006851	ENSMGAG00000006821	ENSMGAG00000006890	ENSMGAG00000017347	ENSMGAG00000016722	HIPK1 (ENSMGAG00000005437)	DCLRE1B (ENSMGAG00000015672)
Turkey	MODERN SPECIES	20	ENSMGAG00000001374	ENSMGAG00000022615	ENSMGAG00000001270	ENSMGAG00000001297	ENSMGAG00000001214	ENSMGAG00000001115	ENSMGAG00000001091	ENSMGAG00000001081	ENSMGAG00000021572	ENSMGAG00000022162	ENSMGAG00000000968	ENSMGAG00000000895	ENSMGAG00000000891	BRPF3 (ENSMGAG00000000829) #25	ENSMGAG00000000875	ENSMGAG00000000790 #22	ENSMGAG00000000797 #24	ENSMGAG00000019683 #22	SLC26A8 (ENSMGAG00000000733) #21	ENSMGAG00000000715 #20	ENSMGAG00000000709 #19	ENSMGAG00000019486 #20	CLPS (ENSMGAG00000000703) #18	ENSMGAG00000000691 #14	ENSMGAG00000000682 #13	ENSMGAG00000000674 #12	ENSMGAG00000006851	ENSMGAG00000006821	ENSMGAG00000006890	ENSMGAG00000017347	ENSMGAG00000016722
Chicken	MODERN SPECIES	18						ENSGALG00010026836	MICAL1 (ENSGALG00010026846)	SMPD2 (ENSGALG00010026854)	TEAD3 (ENSGALG00010026874) #12	TULP1 (ENSGALG00010026885) #13	FKBP5 (ENSGALG00010026893) #14	CLPS (ENSGALG00010026906) #18	LHFPL5 (ENSGALG00010026950) #19	SRPK1 (ENSGALG00010026964) #20	SLC26A8 (ENSGALG00010027001) #21	MAPK14 (ENSGALG00010027041) #22	MAPK13 (ENSGALG00010027045) #24	BRPF3 (ENSGALG00010027074) #25	TBC1D22B (ENSGALG00010027080)	PIM1 (ENSGALG00010027085)	CACNA1S (ENSGALG00010027086)	KIF21B (ENSGALG00010027107)	ELF3 (ENSGALG00010027121)	GPR37L1 (ENSGALG00010024486)	ARL8A (ENSGALG00010024501)	PTPN7 (ENSGALG00010025801)	ENSGALG00010025829	LGR6 (ENSGALG00010025865)	ZC3H11A (ENSGALG00010025892)	NELFE (ENSGALG00010025929)	SKIC2 (ENSGALG00010025933)
Japanese quail	MODERN SPECIES	18		ENSCJPG00005002210	ENSCJPG00005002213	ENSCJPG00005002222	ENSCJPG00005002225	ENSCJPG00005002229	ENSCJPG00005002257	SMPD2 (ENSCJPG00005002265)	TEAD3 (ENSCJPG00005002268) #12	TULP1 (ENSCJPG00005002270) #13	FKBP5 (ENSCJPG00005002277) #14	ENSCJPG00005002278	LHFPL5 (ENSCJPG00005002279) #19	SRPK1 (ENSCJPG00005002302) #20	SLC26A8 (ENSCJPG00005003950) #21	MAPK14 (ENSCJPG00005003954) #22	MAPK13 (ENSCJPG00005003981) #24	BRPF3 (ENSCJPG00005003986) #25	TBC1D22B (ENSCJPG00005004025)	PIM1 (ENSCJPG00005004029)	CACNA1S (ENSCJPG00005004046)	KIF21B (ENSCJPG00005006012)	ELF3 (ENSCJPG00005006825)	GPR37L1 (ENSCJPG00005006828)	ARL8A (ENSCJPG00005006829)	PTPN7 (ENSCJPG00005006834)	ENSCJPG00005006835	LGR6 (ENSCJPG00005006846)	ENSCJPG00005006848	SKIC2 (ENSCJPG00005006849)	KLHL12 (ENSCJPG00005006915)
Anatidae	ANCESTRAL SPECIES	38	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.a ##12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000003856 #15	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT01100000263544.c.a.b.a #21	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472.k	ENSGT00940000153832.e.a	ENSGT00940000158289.b.e	ENSGT00940000159650	ENSGT00940000158955	ENSGT01100000263518.B.b.a	ENSGT00940000159657.d	ENSGT00940000160979	ENSGT00940000164079	ENSGT00940000159939	ENSGT00940000155199	ENSGT00390000016889	ENSGT00950000182825.A.a.a
Duck	MODERN SPECIES	18	TAF8 (ENSAPLG00000008259)	ENSAPLG00000008250	ENSAPLG00000016899	BTG2 (ENSAPLG00000002151)	FMOD (ENSAPLG00000007593)	PRELP (ENSAPLG00000014551)	OPTC (ENSAPLG00000014416)	ATP2B4 (ENSAPLG00000012830)	TULP1 (ENSAPLG00000030544) #13	FKBP5 (ENSAPLG00000003627) #14	ARMC12 (ENSAPLG00000024833) #15	CLPS (ENSAPLG00000003624) #18	LHFPL5 (ENSAPLG00000028023) #19	SRPK1 (ENSAPLG00000003371) #20	SLC26A8 (ENSAPLG00000002988) #21	MAPK14 (ENSAPLG00000002603) #22	MAPK13 (ENSAPLG00000002168) #24	ENSAPLG00000015505	BRPF3 (ENSAPLG00000000598) #25	ENSAPLG00000018472	CACNA1S (ENSAPLG00000002552)	ENSAPLG00000024836	KIF21B (ENSAPLG00000004318)	ELF3 (ENSAPLG00000026589)	ENSAPLG00000004698	ELK4 (ENSAPLG00000004738)	MFSD4A (ENSAPLG00000004747)	CDK18 (ENSAPLG00000004817)	NUAK2 (ENSAPLG00000020575)	DSTYK (ENSAPLG00000005300)	RBBP5 (ENSAPLG00000005563)
Pink-footed goose	MODERN SPECIES	153											ARMC12 (ENSABRG00000012929) #15	CLPS (ENSABRG00000012942) #18	LHFPL5 (ENSABRG00000012945) #19	SRPK1 (ENSABRG00000012964) #20	SLC26A8 (ENSABRG00000013390) #21	MAPK14 (ENSABRG00000013417) #22	MAPK13 (ENSABRG00000013424) #24	BRPF3 (ENSABRG00000013439) #25	TBC1D22B (ENSABRG00000013450)	ENSABRG00000013466	CACNA1S (ENSABRG00000013746)	KIF21B (ENSABRG00000016228)	ELF3 (ENSABRG00000016260)	GPR37L1 (ENSABRG00000016276)	ARL8A (ENSABRG00000016277)	PTPN7 (ENSABRG00000016282)	ENSABRG00000016289	LGR6 (ENSABRG00000016304)	KLHL12 (ENSABRG00000016321)	RABIF (ENSABRG00000016340)	ENSABRG00000016345
Neognathae_b	ANCESTRAL SPECIES	24	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #11	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000153394.c.a.g.a.a.b	ENSGT00940000153394.c.a.g.a.b	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695
Passeriformes	ANCESTRAL SPECIES	21	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #11	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000158083	ENSGT00940000157665	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b
Great tit	MODERN SPECIES	19	ENSPMJG00000012389 #7	ENSPMJG00000012388 #7	DEF6 (ENSPMJG00000012387) #8	PPARD (ENSPMJG00000012386) #9	ENSPMJG00000012385	FANCE (ENSPMJG00000012384) #10	ENSPMJG00000012383	MICAL1 (ENSPMJG00000012382)	SMPD2 (ENSPMJG00000012381)	TEAD3 (ENSPMJG00000012380) #12	TULP1 (ENSPMJG00000012378) #13	FKBP5 (ENSPMJG00000012377) #14	CLPS (ENSPMJG00000012375) #18	LHFPL5 (ENSPMJG00000012374) #19	SRPK1 (ENSPMJG00000012373) #20	MAPK14 (ENSPMJG00000012371) #22	MAPK13 (ENSPMJG00000012370) #24	BRPF3 (ENSPMJG00000012369) #25	TBC1D22B (ENSPMJG00000012368)	PHTF1 (ENSPMJG00000011996)	RSBN1 (ENSPMJG00000011995)	PTPN22 (ENSPMJG00000011994)	AP4B1 (ENSPMJG00000011993)	DCLRE1B (ENSPMJG00000011992)	HIPK1 (ENSPMJG00000011991)	OLFML3 (ENSPMJG00000011990)	SYT6 (ENSPMJG00000011989)	TRIM33 (ENSPMJG00000011988)	BCAS2 (ENSPMJG00000011987)	DENND2C (ENSPMJG00000011986)	AMPD1 (ENSPMJG00000011985)
Passeriformes_d	ANCESTRAL SPECIES	21	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #11	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000158083	ENSGT00940000157665	ENSGT00940000156361.B	ENSGT00390000014494	ENSGT00950000182931.B.a.b
Flycatcher	MODERN SPECIES	18	SCUBE3 (ENSFALG00000003706)	ENSFALG00000003701 #11	ZNF76 (ENSFALG00000003698) #7	DEF6 (ENSFALG00000003694) #8	PPARD (ENSFALG00000003689) #9	ENSFALG00000024512	ENSFALG00000003677 #10	ENSFALG00000003653	ENSFALG00000003639	TEAD3 (ENSFALG00000003635) #12	TULP1 (ENSFALG00000003621) #13	FKBP5 (ENSFALG00000003600) #14	CLPS (ENSFALG00000003594) #18	ENSFALG00000003587 ##19	SRPK1 (ENSFALG00000003585) #20	MAPK14 (ENSFALG00000003563) #22	MAPK13 (ENSFALG00000003537) #24	BRPF3 (ENSFALG00000003524) #25	ENSFALG00000003517	PHTF1 (ENSFALG00000003510)	RSBN1 (ENSFALG00000003503)	AP4B1 (ENSFALG00000003489)	HIPK1 (ENSFALG00000003475)	OLFML3 (ENSFALG00000028315)	SYT6 (ENSFALG00000003461)	TRIM33 (ENSFALG00000003445)	BCAS2 (ENSFALG00000003431)	DENND2C (ENSFALG00000003425)	AMPD1 (ENSFALG00000003420)	NRAS (ENSFALG00000003415)	CSDE1 (ENSFALG00000003407)
Passeriformes_g	ANCESTRAL SPECIES	24	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #11	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000164219.a.a.b.c.a	ENSGT00940000164219.a.a.b.c.b	ENSGT00940000164219.a.b.b	ENSGT00940000160375.A	ENSGT00940000161110.a.b.a.b
Passeroidea	ANCESTRAL SPECIES	24	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #11	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000157472	ENSGT00390000011648.b	ENSGT00390000001969.a	ENSGT00990000204522	ENSGT00940000160958	ENSGT00940000157025	ENSGT00940000158175	ENSGT00940000155356	ENSGT00940000164219.a.a.b.c.a	ENSGT00940000164219.a.a.b.c.b	ENSGT00940000161110.a.b.a.b	ENSGT00940000164219.a.b.b	ENSGT00940000163310
Common canary	MODERN SPECIES	62	RPL10A (ENSSCAG00000015835) #11	ZNF76 (ENSSCAG00000015828) #7	DEF6 (ENSSCAG00000015827) #8	PPARD (ENSSCAG00000015824) #9	ENSSCAG00000015820	ENSSCAG00000015815 #10	ENSSCAG00000015810	MICAL1 (ENSSCAG00000015777)	SMPD2 (ENSSCAG00000015767)	TEAD3 (ENSSCAG00000015763) #12	TULP1 (ENSSCAG00000015756) #13	FKBP5 (ENSSCAG00000015748) #14	CLPS (ENSSCAG00000015746) #18	LHFPL5 (ENSSCAG00000015744) #19	SRPK1 (ENSSCAG00000015738) #20	MAPK14 (ENSSCAG00000015730) #22	MAPK13 (ENSSCAG00000015726) #24	BRPF3 (ENSSCAG00000015721) #25	TBC1D22B (ENSSCAG00000015715)	PHTF1 (ENSSCAG00000015710)	RSBN1 (ENSSCAG00000015697)	ENSSCAG00000015687	ENSSCAG00000015685	AP4B1 (ENSSCAG00000015682)	DCLRE1B (ENSSCAG00000015679)	HIPK1 (ENSSCAG00000015672)	ENSSCAG00000015667	ENSSCAG00000015657	ENSSCAG00000015652	ENSSCAG00000015646	ENSSCAG00000015643
Zebra finch	MODERN SPECIES	19	RPL10A (ENSTGUG00000001749) #11	ZNF76 (ENSTGUG00000001745) #7	DEF6 (ENSTGUG00000001738) #8	PPARD (ENSTGUG00000001735) #9	ENSTGUG00000001733	FANCE (ENSTGUG00000001732) #10	ENSTGUG00000027374	MICAL1 (ENSTGUG00000001721)	SMPD2 (ENSTGUG00000001713)	TEAD3 (ENSTGUG00000001691) #12	TULP1 (ENSTGUG00000001686) #13	FKBP5 (ENSTGUG00000001670) #14	CLPS (ENSTGUG00000021840) #18	LHFPL5 (ENSTGUG00000001662) #19	SRPK1 (ENSTGUG00000001648) #20	MAPK14 (ENSTGUG00000001633) #22	MAPK13 (ENSTGUG00000001624) #24	BRPF3 (ENSTGUG00000001612) #25	TBC1D22B (ENSTGUG00000001592)	PHTF1 (ENSTGUG00000001583)	RSBN1 (ENSTGUG00000001581)	ENSTGUG00000022513	ENSTGUG00000029592	AP4B1 (ENSTGUG00000001565)	DCLRE1B (ENSTGUG00000020225)	HIPK1 (ENSTGUG00000001553)	ENSTGUG00000024540	ENSTGUG00000001552	ENSTGUG00000027497	ENSTGUG00000001539	ENSTGUG00000027790
Medium ground finch	MODERN SPECIES	246									MICAL1 (ENSGFOG00000009493)	SMPD2 (ENSGFOG00000009506)	TEAD3 (ENSGFOG00000009523) #12	TULP1 (ENSGFOG00000009587) #13	FKBP5 (ENSGFOG00000009596) #14	CLPS (ENSGFOG00000009607) #18	SRPK1 (ENSGFOG00000009612) #20	MAPK14 (ENSGFOG00000009629) #22	MAPK13 (ENSGFOG00000009656) #24	BRPF3 (ENSGFOG00000009664) #25	TBC1D22B (ENSGFOG00000009671)	PHTF1 (ENSGFOG00000009679)	RSBN1 (ENSGFOG00000009704)	PTPN22 (ENSGFOG00000009805)	AP4B1 (ENSGFOG00000009893)	DCLRE1B (ENSGFOG00000009902)	HIPK1 (ENSGFOG00000009908)	ENSGFOG00000009922	ENSGFOG00000009944	ENSGFOG00000009951	ENSGFOG00000009962	ENSGFOG00000009980	ENSGFOG00000009984
Neognathae_c	ANCESTRAL SPECIES	27	ENSGT00940000160792	ENSGT00940000153185.a.a.b	ENSGT00390000008767.d #11	ENSGT00940000160911 #7	ENSGT00950000183017.b.b.a.b #8	ENSGT00940000156676 #9	ENSGT00390000000705 #10	ENSGT00940000159117	ENSGT00390000009166	ENSGT00950000182956.b.b.b #12	ENSGT00940000158771 #13	ENSGT00940000158726 #14	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a.g.a.a.a	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000163908	ENSGT00390000014270	ENSGT00940000160379 #36	ENSGT00940000159918.a.b #35	ENSGT00910000144115.a #33	ENSGT00970000193695	ENSGT00940000153544.a #32	ENSGT00390000007975.b #31
Kakapo	MODERN SPECIES	30	SCUBE3 (ENSSHBG00005008596)	RPL10A (ENSSHBG00005008583) #11	ZNF76 (ENSSHBG00005008577) #7	DEF6 (ENSSHBG00005008569) #8	PPARD (ENSSHBG00005008565) #9	FANCE (ENSSHBG00005008552) #10	ENSSHBG00005008540	MICAL1 (ENSSHBG00005008519)	SMPD2 (ENSSHBG00005008509)	TEAD3 (ENSSHBG00005008445) #12	TULP1 (ENSSHBG00005008416) #13	FKBP5 (ENSSHBG00005008405) #14	CLPS (ENSSHBG00005008395) #18	LHFPL5 (ENSSHBG00005008391) #19	SRPK1 (ENSSHBG00005008383) #20	MAPK14 (ENSSHBG00005008376) #22	MAPK13 (ENSSHBG00005008359) #24	BRPF3 (ENSSHBG00005008346) #25	TBC1D22B (ENSSHBG00005008331)	ENSSHBG00005008319	KIF21B (ENSSHBG00005008301)	CACNA1S (ENSSHBG00005006434)	OLFML3 (ENSSHBG00005006051)	HIPK1 (ENSSHBG00005005909)	DCLRE1B (ENSSHBG00005005849)	AP4B1 (ENSSHBG00005001005)	ENSSHBG00005001004	RSBN1 (ENSSHBG00005001001)	PHTF1 (ENSSHBG00005014943)	MAGI3 (ENSSHBG00005014772)	LRIG2 (ENSSHBG00005014732)
Golden eagle	MODERN SPECIES	16	SCUBE3 (ENSACCG00020014785)	RPL10A (ENSACCG00020014808) #11	ZNF76 (ENSACCG00020014824) #7	DEF6 (ENSACCG00020014845) #8	PPARD (ENSACCG00020014867) #9	FANCE (ENSACCG00020014883) #10	ENSACCG00020014912	MICAL1 (ENSACCG00020014962)	SMPD2 (ENSACCG00020015019)	TEAD3 (ENSACCG00020015042) #12	TULP1 (ENSACCG00020015069) #13	FKBP5 (ENSACCG00020015103) #14	CLPS (ENSACCG00020015120) #18	LHFPL5 (ENSACCG00020015137) #19	SRPK1 (ENSACCG00020015171) #20	MAPK14 (ENSACCG00020015214) #22	MAPK13 (ENSACCG00020015260) #24	BRPF3 (ENSACCG00020015289) #25	ENSACCG00020015307	TBC1D22B (ENSACCG00020015326)	PIM1 (ENSACCG00020015351)	FGD2 (ENSACCG00020015370)	MTCH1 (ENSACCG00020015394)	ENSACCG00020015423	C6orf89 (ENSACCG00020015438)	ENSACCG00020015459 #36	ENSACCG00020015472 #35	SRSF3 (ENSACCG00020015489) #33	STK38 (ENSACCG00020015503) #32	KCTD20 (ENSACCG00020015539) #31	ETV7 (ENSACCG00020015560) #29
African ostrich	MODERN SPECIES	350												FKBP5 (ENSSCUG00000003867) #14	ENSSCUG00000003868 ##19	SRPK1 (ENSSCUG00000003870) #20	SLC26A8 (ENSSCUG00000003871) #21	MAPK14 (ENSSCUG00000003877) #22	BRPF3 (ENSSCUG00000003886) #25	TBC1D22B (ENSSCUG00000003893)
Australian saltwater crocodile	MODERN SPECIES	52						ENSCPRG00005002990	SMPD2 (ENSCPRG00005003001)	TEAD3 (ENSCPRG00005003008) #12	TULP1 (ENSCPRG00005003022) #13	FKBP5 (ENSCPRG00005003028) #14	ENSCPRG00005003032	CLPS (ENSCPRG00005003035) #18	LHFPL5 (ENSCPRG00005003052) #19	SRPK1 (ENSCPRG00005003059) #20	SLC26A8 (ENSCPRG00005003078) #21	MAPK14 (ENSCPRG00005003095) #22	MAPK13 (ENSCPRG00005003184) #24	BRPF3 (ENSCPRG00005003190) #25	ENSCPRG00005003206	TBC1D22B (ENSCPRG00005003209)	ENSCPRG00005003218	PIM1 (ENSCPRG00005003224)	FGD2 (ENSCPRG00005003284)	MTCH1 (ENSCPRG00005003292)	ENSCPRG00005003302	C6orf89 (ENSCPRG00005003304)	ENSCPRG00005003307 #36	CDKN1A (ENSCPRG00005003310) #35	SRSF3 (ENSCPRG00005003315) #33	STK38 (ENSCPRG00005003323) #32	KCTD20 (ENSCPRG00005003333) #31
Anura	ANCESTRAL SPECIES	185	ENSGT00990000204711	ENSGT01010000229244	ENSGT00410000026259	ENSGT00970000198077	ENSGT00940000159110	ENSGT00950000182818.A.l	ENSGT00510000048192	ENSGT00940000166966	ENSGT00940000166365	ENSGT00390000009166	ENSGT00940000158771 #13	ENSGT00390000001927.b	ENSGT00940000154404.a	ENSGT00390000012644 #18	ENSGT00940000155264 #20	ENSGT00940000155325 #22
Leishan spiny toad	MODERN SPECIES	5	TNNT2 (ENSLLEG00000004583)	ENSLLEG00000004578	PKP1 (ENSLLEG00000004567)	ENSLLEG00000004555	CACNA1S (ENSLLEG00000004506)	ENSLLEG00000004487	SMIM29 (ENSLLEG00000004481)	ENSLLEG00000004477	ENSLLEG00000004472	ENSLLEG00000004461 #10	ENSLLEG00000004454	ENSLLEG00000012594	ENSLLEG00000012517	TULP1 (ENSLLEG00000012247) #13	CLPS (ENSLLEG00000012161) #18	ENSLLEG00000011305 #22	ENSLLEG00000011193	VEZF1 (ENSLLEG00000010906)	GUCA1C (ENSLLEG00000010835)	ENSLLEG00000010813	BRPF3 (ENSLLEG00000010465) #25	ENSLLEG00000010426	TBC1D22B (ENSLLEG00000010267)	ENSLLEG00000010096	ENSLLEG00000010052	ENSLLEG00000010028	KDM5B (ENSLLEG00000009416)	ADIPOR1 (ENSLLEG00000009295)	SFT2D2 (ENSLLEG00000009219)	RABIF (ENSLLEG00000009189)	ENSLLEG00000009163
Frog	MODERN SPECIES	2	ENSXETG00000046331	spdef (ENSXETG00000034149)	pacsin1 (ENSXETG00000012375)	ENSXETG00000047274	rpl10a (ENSXETG00000012374) #11	smpd2 (ENSXETG00000000421)	ENSXETG00000049100	ENSXETG00000044991	tulp1 (ENSXETG00000000422) #13	ENSXETG00000041977	ENSXETG00000048423	clps (ENSXETG00000043327) #18	srpk1 (ENSXETG00000000426) #20	ENSXETG00000042261	ENSXETG00000043890	mapk14 (ENSXETG00000000438) #22	zc3h11a (ENSXETG00000000439)	ENSXETG00000048655	ENSXETG00000048925	atp2b2 (ENSXETG00000000441)	ENSXETG00000045468	optc (ENSXETG00000000442)	prelp (ENSXETG00000030655)	fmod (ENSXETG00000011835)	ENSXETG00000047040	XB5763442 [provisional:chia] (ENSXETG00000011839)	btg2 (ENSXETG00000039279)	chia (ENSXETG00000011843)	ENSXETG00000046179	tomm6 (ENSXETG00000037184)	pifo (ENSXETG00000030298)
Coelacanth	MODERN SPECIES	3672																MAPK14 (ENSLACG00000001584) #22
Actinopterygii	ANCESTRAL SPECIES	134	ENSGT00940000157882	ENSGT00730000112095	ENSGT01030000234588.b.a	ENSGT00440000039564.a.a	ENSGT00940000156777	ENSGT00940000156637	ENSGT00940000158040	ENSGT00390000009166	ENSGT00950000182956.b.b.b.e.a #12	ENSGT00940000158771 #13	ENSGT00940000156194 #37	ENSGT00940000159650	ENSGT00390000012644 #18	ENSGT00990000203541.a.a.b #19	ENSGT00940000155264 #20	ENSGT00940000155325 #22	ENSGT00940000159584 #24	ENSGT00940000155056 #25	ENSGT00940000160682.a	ENSGT00940000157472	ENSGT00940000153394.c.a
Reedfish	MODERN SPECIES	11	ENSECRG00000013383	ENSECRG00000013347 #36	ENSECRG00000013323	ENSECRG00000013274	ENSECRG00000013242	sars1 (ENSECRG00000013207)	celsr2 (ENSECRG00000013108)	ENSECRG00000013050	ppil1 (ENSECRG00000013023)	cpne5a (ENSECRG00000012993) #37	KIF21B (ENSECRG00000012971)	CLPS (ENSECRG00000012947) #18	lhfpl5b (ENSECRG00000012936) #19	ENSECRG00000012924 #20	srpk1b (ENSECRG00000012901) #20	mapk14a (ENSECRG00000012813) #22	MAPK13 (ENSECRG00000012710) #24	BRPF3 (ENSECRG00000012663) #25	ENSECRG00000012640	TBC1D22B (ENSECRG00000012604)	pim1 (ENSECRG00000012562)	ENSECRG00000012536	PTPN22 (ENSECRG00000012468)	RSBN1 (ENSECRG00000012437)	phtf1 (ENSECRG00000012412)	MAGI3 (ENSECRG00000012383)	ENSECRG00000012344	ENSECRG00000012315	ENSECRG00000012284	ENSECRG00000007168	LGR6 (ENSECRG00000007117)
Neopterygii	DUPLICATION
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a #22
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Cyprininae_a	ANCESTRAL SPECIES	208	ENSGT00390000009630.p	ENSGT00940000156315.e.b.d	ENSGT00940000154554.a.f.d	ENSGT00940000154554.a.e.b	ENSGT00940000155851.c.b.b	ENSGT00390000000911.h.b.d	ENSGT01050000244971.A.d.a.a.f	ENSGT01050000244971.B.a.b	ENSGT00390000004940.a.b.j.b.b	ENSGT00940000156199.a.a.b	ENSGT00940000156173.e	ENSGT00940000155356.d.d	ENSGT00940000162229.a	ENSGT00390000011228.a.b	ENSGT00940000162196.j	ENSGT00940000155325.a.a.a.a.a #22	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264.d #20	ENSGT00940000159650.c	ENSGT00940000156194.m.b.a #37	ENSGT00940000155218.A.c.c	ENSGT00940000165182.d.b	ENSGT00390000005939.a.b.b.b	ENSGT00940000156490.b.b.b	ENSGT00390000014626.i	ENSGT00950000183171.A.b.a.b.c	ENSGT00940000177900	ENSGT00940000166794.f	ENSGT00940000165051	ENSGT00940000161493.h	ENSGT00530000063749.c.a.b
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	551	DNAJC16 (ENSSGRG00000029173)	cdab (ENSSGRG00000029164)	ENSSGRG00000028863	ENSSGRG00000028848	camk2n1 (ENSSGRG00000028842)	ENSSGRG00000028840	ddx19b (ENSSGRG00000028449)	ENSSGRG00000028445	ENSSGRG00000028444	acap3b (ENSSGRG00000028441)	UBE2J2 (ENSSGRG00000028434)	ENSSGRG00000028433	b3galt6 (ENSSGRG00000028431)	ENSSGRG00000028429	tmem167b (ENSSGRG00000028428)	ENSSGRG00000028427 #22	ENSSGRG00000028426 #22	srpk1b (ENSSGRG00000028423) #20	KIF21B (ENSSGRG00000028279)	cpne5b (ENSSGRG00000028278) #37
Golden-line barbel	MODERN SPECIES	3036																ENSSGRG00000011161 #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Channel catfish	MODERN SPECIES	13	TMCC1 (ENSIPUG00000023892)	DNAJC16 (ENSIPUG00000023896)	Cda (ENSIPUG00000023900)	ENSIPUG00000023904	ENSIPUG00000023906	camk2n1 (ENSIPUG00000023911)	ddx19b (ENSIPUG00000023912)	ENSIPUG00000023919	pusl1 (ENSIPUG00000023921)	acap3b (ENSIPUG00000023923)	UB2J2 (ENSIPUG00000023930)	HIPK1 (ENSIPUG00000023934)	ENSIPUG00000023948	b3galt6 (ENSIPUG00000023945)	tmem167b (ENSIPUG00000023949)	ENSIPUG00000023950 #22	srpk1b (ENSIPUG00000023963) #20	ENSIPUG00000023982 #19	kif21b (ENSIPUG00000023985)	cpne5b (ENSIPUG00000023995) #37	ADORA1 (ENSIPUG00000023999)	ENSIPUG00000024004	ENSIPUG00000024007	ENSIPUG00000024008	ENSIPUG00000024010	ENSIPUG00000024011	CHIA (ENSIPUG00000024015)	ENSIPUG00000024019	slc6a14 (ENSIPUG00000024022)	fmod (ENSIPUG00000024043)	zgc:113307 (ENSIPUG00000024044)
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Protacanthopterygii	ANCESTRAL SPECIES	292													ENSGT00940000169818	ENSGT00940000162229	ENSGT00940000162196.d	ENSGT00940000155325.a.a.a.a.a #22
Salmoninae	ANCESTRAL SPECIES	1239													ENSGT00940000169818	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.a.a.a.a #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Atlantic salmon	MODERN SPECIES	14	atp6ap1la (ENSSSAG00000074146)	rps23 (ENSSSAG00000007090)	appl1 (ENSSSAG00000073962)	HESX1 (ENSSSAG00000110298)	il17rd (ENSSSAG00000073937)	ARHGEF3 (ENSSSAG00000073898)	ENSSSAG00000110320	ENSSSAG00000087797	ENSSSAG00000088014	ENSSSAG00000118251	srpk1b (ENSSSAG00000073880) #20	ENSSSAG00000073877 #19	ENSSSAG00000070231	cpne5b (ENSSSAG00000067456) #37	ENSSSAG00000105456	ENSSSAG00000067360 #22	ENSSSAG00000066858	cdd (ENSSSAG00000066839)	ENSSSAG00000066837	ENSSSAG00000066832	ENSSSAG00000066715	ENSSSAG00000100803	ENSSSAG00000066689	ENSSSAG00000094656	ppp1r16b (ENSSSAG00000066102)	fam210b (ENSSSAG00000066096)	shmt2 (ENSSSAG00000066094)	ENSSSAG00000082070	R3HDM2 (ENSSSAG00000064420)	INHBC (ENSSSAG00000090732)	gli1 (ENSSSAG00000064356)
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.a #22
Rainbow trout	MODERN SPECIES	28	rps23 (ENSOMYG00000030388)	appl1 (ENSOMYG00000029294)	il17rd (ENSOMYG00000028347)	ENSOMYG00000028035	ENSOMYG00000027883	ENSOMYG00000051471	ENSOMYG00000027831	ENSOMYG00000061860	ENSOMYG00000027818	srpk1b (ENSOMYG00000027803) #20	ENSOMYG00000027794 #19	ENSOMYG00000025535	cpne5b (ENSOMYG00000024711) #37	ENSOMYG00000024623	ENSOMYG00000024601	ENSOMYG00000024570 #22	ENSOMYG00000023819	cdab (ENSOMYG00000023394)	ENSOMYG00000023376	camk2n1 (ENSOMYG00000023367)	ENSOMYG00000023352	ddx19b (ENSOMYG00000023284)	ENSOMYG00000069626	ENSOMYG00000023234	ENSOMYG00000023176	ENSOMYG00000022989	ENSOMYG00000022867	ENSOMYG00000022828	ENSOMYG00000022797	ENSOMYG00000051093	R3HDM2 (ENSOMYG00000021429)
Huchen	MODERN SPECIES	4545													ENSHHUG00000039148 #37	b3galt6 (ENSHHUG00000039164)	TMEM167B (ENSHHUG00000039180)	ENSHHUG00000039191 #22
Northern pike	MODERN SPECIES	16	ENSELUG00000031687	snrpc (ENSELUG00000020489)	ENSELUG00000020468	ENSELUG00000021134	SYT2 (ENSELUG00000021160)	mybphb (ENSELUG00000021224)	NAV1 (ENSELUG00000021348)	csrp1b (ENSELUG00000021388)	tnni1b (ENSELUG00000021412)	ENSELUG00000021424	PKP1 (ENSELUG00000021481)	smpd2a (ENSELUG00000021534)	tead3b (ENSELUG00000021598) #12	b3galt6 (ENSELUG00000019507)	tmem167b (ENSELUG00000019528)	MAPK14 (ENSELUG00000019598) #22	cpne5b (ENSELUG00000019675) #37	KIF21B (ENSELUG00000019762)	ENSELUG00000030045	LHFPL5 (ENSELUG00000019788) #19	srpk1b (ENSELUG00000019820) #20	ENSELUG00000025399	ADORA1 (ENSELUG00000019846)	ENSELUG00000026400	CCDC66 (ENSELUG00000019898)	TASOR (ENSELUG00000019907)	arhgef3 (ENSELUG00000019948)	il17rd (ENSELUG00000020026)	HESX1 (ENSELUG00000020060)	appl1 (ENSELUG00000020145)	ASB14 (ENSELUG00000020155)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.b #22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.b #22
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	63	ENSGT00950000182997.a.b.b.b.a.b.h.a	ENSGT00940000155261.a.a.c	ENSGT00940000159366.e	ENSGT00940000154409.eb.a.c	ENSGT00940000155440.c.b.h.b	ENSGT01100000263685.b	ENSGT00950000183017.b.b.a.b.a.f #8	ENSGT00940000156676.d.d #9	ENSGT00950000183077.b	ENSGT00530000063722.a.kb	ENSGT00940000154102.a.g.e	ENSGT00390000011228.a.a.e	ENSGT00940000162196.c	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.a.a.b.a #22	ENSGT00940000161154.b.f	ENSGT00950000183042.b.a	ENSGT00940000156977.f.a	ENSGT00940000159659.d.a.a	ENSGT00990000203541.a.b.a.b.a ##19	ENSGT00940000157877.a.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a	ENSGT00940000166426.h	ENSGT00940000161090.B.c.b.a.b.b	ENSGT00940000161090.B.c.a.a.h	ENSGT00940000163961.a.a.a.e	ENSGT00940000153336.a.a.f.b	ENSGT00390000000470.m	ENSGT00940000163886.B.b.a.m.a
Salmoninae_a	ANCESTRAL SPECIES	14	ENSGT00950000182997.a.b.b.b.a.b.h.a	ENSGT00940000155261.a.a.c	ENSGT00940000159366.e	ENSGT00940000154409.eb.a.c	ENSGT00940000155440.c.b.h.b	ENSGT01100000263685.b	ENSGT00950000183017.b.b.a.b.a.f #8	ENSGT00940000156676.d.d #9	ENSGT00950000183077.b.f	ENSGT00530000063722.a.kb	ENSGT00940000154102.a.g.e	ENSGT00390000011228.a.a.e	ENSGT00940000162196.c	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.a.a.b.a #22	ENSGT00940000161154.b.f	ENSGT00950000183042.b.a	ENSGT00940000156977.f.a	ENSGT00940000159659.d.a.a	ENSGT00990000203541.a.b.a.b.a ##19	ENSGT00940000157877.a.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a	ENSGT00940000166426.h	ENSGT00940000161090.B.c.b.a.b.b	ENSGT00940000163961.a.a.a.e	ENSGT00940000153336.a.a.f.b	ENSGT00390000000470.m	ENSGT00940000163886.B.b.a.m.a	ENSGT00390000017353.n	ENSGT00390000013740
Oncorhynchus	ANCESTRAL SPECIES	7	ENSGT00950000182997.a.b.b.b.a.b.h.a	ENSGT00940000155261.a.a.c	ENSGT00940000159366.e	ENSGT00940000154409.eb.a.c	ENSGT00940000155440.c.b.h.b	ENSGT01100000263685.b	ENSGT00950000183017.b.b.a.b.a.f #8	ENSGT00940000156676.d.d #9	ENSGT00950000183077.b.f	ENSGT00530000063722.a.kb	ENSGT00940000154102.a.g.e	ENSGT00390000011228.a.a.e	ENSGT00940000162196.c	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.a.a.b.a #22	ENSGT00940000161154.b.f	ENSGT00950000183042.b.a	ENSGT00940000156977.f.a	ENSGT00940000159659.d.a.a	ENSGT00990000203541.a.b.a.b.a ##19	ENSGT00940000157877.a.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a	ENSGT00940000166426.h	ENSGT00940000161090.B.c.b.a.b.b	ENSGT00940000163961.a.a.a.e	ENSGT00940000153336.a.a.f.b	ENSGT00390000000470.m	ENSGT00940000163886.B.b.a.m.a	ENSGT00390000013740	ENSGT00940000154343.gb.c
Oncorhynchus_a	ANCESTRAL SPECIES	9	ENSGT00940000155261.a.a.c	ENSGT00940000159366.e	ENSGT00940000154409.eb.a.c	ENSGT00940000155440.c.b.h.b	ENSGT01100000263685.b	ENSGT01100000263526.A.b.b.a.b.a.a.a.a.b.a.b.a.a	ENSGT00950000183017.b.b.a.b.a.f #8	ENSGT00940000156676.d.d #9	ENSGT00950000183077.b.f	ENSGT00530000063722.a.kb	ENSGT00940000154102.a.g.e	ENSGT00390000011228.a.a.e	ENSGT00940000162196.c	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.a.a.b.a #22	ENSGT00940000161154.b.f	ENSGT00950000183042.b.a	ENSGT00940000156977.f.a	ENSGT00940000159659.d.a.a	ENSGT00990000203541.a.b.a.b.a ##19	ENSGT00940000157877.a.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a	ENSGT00940000166426.h	ENSGT00940000161090.B.c.b.a.b.b	ENSGT00940000163961.a.a.a.e	ENSGT00940000153336.a.a.f.b	ENSGT00390000000470.m	ENSGT00940000163886.B.b.a.m.a	ENSGT00390000013740
Coho salmon	MODERN SPECIES	16	atf7a (ENSOKIG00005016525)	asb8 (ENSOKIG00005016513)	ENSOKIG00005016478	pfkma (ENSOKIG00005011510)	ENSOKIG00005011246	ENSOKIG00005011243	def6a (ENSOKIG00005011211) #8	ppardb (ENSOKIG00005011188) #9	mkrn4 (ENSOKIG00005011165)	ENSOKIG00005011154	ENSOKIG00005011138	zgc:195245 (ENSOKIG00005011126)	ENSOKIG00005011120	si:ch211-163l21.7 (ENSOKIG00005011107)	ELAPOR1 (ENSOKIG00005009223)	MAPK14 (ENSOKIG00005009037) #22	ENSOKIG00005009020	ENSOKIG00005008885	klf15 (ENSOKIG00005008871)	CPNE9 (ENSOKIG00005008062)	LHFPL4 (ENSOKIG00005008010) ##19	ENSOKIG00005007981	ENSOKIG00005007129	zgc:171775 (ENSOKIG00005006971)	ENSOKIG00005006922	krt18a.1 (ENSOKIG00005006889)	eif4ba (ENSOKIG00005006732)	qdprb.4 (ENSOKIG00005006645)	ENSOKIG00005006548	renbp (ENSOKIG00005006446)	TMEM51 (ENSOKIG00005006421)
Chinook salmon	MODERN SPECIES	14	atf7a (ENSOTSG00005044950)	asb8 (ENSOTSG00005044949)	ENSOTSG00005044948	pfkma (ENSOTSG00005032494)	ENSOTSG00005032460	ENSOTSG00005032459	def6a (ENSOTSG00005032423) #8	ppardb (ENSOTSG00005032417) #9	mkrn4 (ENSOTSG00005032415)	ENSOTSG00005032413	ENSOTSG00005032410	zgc:195245 (ENSOTSG00005032409)	ENSOTSG00005032408	si:ch211-163l21.7 (ENSOTSG00005032407)	ELAPOR1 (ENSOTSG00005030398)	MAPK14 (ENSOTSG00005030283) #22	ENSOTSG00005030276	ENSOTSG00005030264	klf15 (ENSOTSG00005030261)	CPNE9 (ENSOTSG00005028364)	LHFPL4 (ENSOTSG00005028359) ##19	ENSOTSG00005028357	ENSOTSG00005027969	zgc:171775 (ENSOTSG00005027943)	ENSOTSG00005027930	krt18a.1 (ENSOTSG00005027925)	eif4ba (ENSOTSG00005027924)	qdprb.4 (ENSOTSG00005027167)	ENSOTSG00005027160	renbp (ENSOTSG00005027124)	ENSOTSG00005027122
Rainbow trout	MODERN SPECIES	7	atf7a (ENSOMYG00000028168)	asb8 (ENSOMYG00000028129)	ENSOMYG00000028102	ENSOMYG00000065041	pfkma (ENSOMYG00000026447)	ENSOMYG00000026144	ENSOMYG00000025844 #8	ENSOMYG00000025767 #9	ENSOMYG00000025668	ENSOMYG00000077164	ENSOMYG00000025615	zgc:195245 (ENSOMYG00000025602)	ENSOMYG00000025594	si:ch211-163l21.7 (ENSOMYG00000025583)	ENSOMYG00000023071	ENSOMYG00000022088 #22	ENSOMYG00000052810	ENSOMYG00000021948	ENSOMYG00000021925	klf15 (ENSOMYG00000021895)	ENSOMYG00000062896	ENSOMYG00000019745	ENSOMYG00000019334 ##19	ENSOMYG00000019282	ENSOMYG00000018744	zgc:171775 (ENSOMYG00000018654)	krt5 (ENSOMYG00000018528)	s1 (ENSOMYG00000049997)	ENSOMYG00000073419	ENSOMYG00000048651	krt18a.1 (ENSOMYG00000018617)
Salmo	ANCESTRAL SPECIES	4	ENSGT00950000182997.a.b.b.b.a.b.h.a	ENSGT00940000155261.a.a.c	ENSGT00940000159366.e	ENSGT00940000154409.eb.a.c	ENSGT00940000155440.c.b.h.b	ENSGT01100000263685.b	ENSGT00950000183017.b.b.a.b.a.f #8	ENSGT00940000156676.d.d #9	ENSGT00950000183077.b.f	ENSGT00530000063722.a.kb	ENSGT00940000154102.a.g.e	ENSGT00390000011228.a.a.e	ENSGT00940000162196.c	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.a.a.b.a #22	ENSGT00940000161154.b.f	ENSGT00950000183042.b.a	ENSGT00940000156977.f.a	ENSGT00940000159659.d.a.a	ENSGT00990000203541.a.b.a.b.a ##19	ENSGT00940000157877.a.b	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.a	ENSGT00940000166426.h	ENSGT00940000161090.B.c.b.a.b.b	ENSGT00940000163961.a.a.a.e	ENSGT00940000153336.a.a.f.b	ENSGT00390000000470.m	ENSGT00940000163886.B.b.a.m.a	ENSGT00390000017353.n	ENSGT00390000013740
Atlantic salmon	MODERN SPECIES	4	dip2ba (ENSSSAG00000109064)	atf7a (ENSSSAG00000074545)	ASB8 (ENSSSAG00000074543)	ENSSSAG00000074534	pfkma (ENSSSAG00000074134)	ENSSSAG00000074095 #8	ENSSSAG00000074107	ENSSSAG00000074034 #9	ENSSSAG00000099367	ENSSSAG00000101309	ENSSSAG00000091829	ENSSSAG00000074026	ENSSSAG00000114082	kiaa1324 (ENSSSAG00000073738)	si:ch211-163l21.7 (ENSSSAG00000095723)	ENSSSAG00000114242 #22	ENSSSAG00000073588	ENSSSAG00000073303	klf15 (ENSSSAG00000073280)	ENSSSAG00000097757	ENSSSAG00000072024	ENSSSAG00000091037	ENSSSAG00000071964	ENSSSAG00000064961	zgc:171775 (ENSSSAG00000064548)	krt8 (ENSSSAG00000064465)	ENSSSAG00000096461	ENSSSAG00000120081	krt18a.1 (ENSSSAG00000064508)	eif4ba (ENSSSAG00000064449)	ENSSSAG00000064358
Huchen	MODERN SPECIES	91	dip2ba (ENSHHUG00000044804)	atf7a (ENSHHUG00000044793)	asb8 (ENSHHUG00000044790)	LARP4 (ENSHHUG00000044781)	pfkma (ENSHHUG00000044677)	ENSHHUG00000044668	def6a (ENSHHUG00000044647) #8	ppardb (ENSHHUG00000044609) #9	mkrn4 (ENSHHUG00000044606)	ENSHHUG00000044600	ENSHHUG00000044595	zgc:195245 (ENSHHUG00000044593)	ENSHHUG00000044591	si:ch211-163l21.7 (ENSHHUG00000044588)	ELAPOR1 (ENSHHUG00000044519)	MAPK14 (ENSHHUG00000044373) #22	ENSHHUG00000044369	SLC41A3 (ENSHHUG00000044346)
Salmoninae	ANCESTRAL SPECIES	500	ENSGT00940000165418	ENSGT00950000182997.a.b.b.b.a.b.h.b	ENSGT00940000155261.a.a.d	ENSGT00940000159366.f	ENSGT00940000156009.A.d.t	ENSGT00940000154409.eb.a.d	ENSGT01090000259987.a.a.b.f	ENSGT00940000155440.c.b.h.a	ENSGT01100000263685.a	ENSGT00950000183017.b.b.a.b.a.e #8	ENSGT00940000156676.d.c #9	ENSGT00390000000705 #10	ENSGT00390000008767.p #11	ENSGT00940000154102.a.g.f	ENSGT00390000011228.a.a.f	ENSGT00940000155325.a.a.a.a.b.b #22	ENSGT00940000162464.n	ENSGT00940000161154.b.e
Salmoninae_a	ANCESTRAL SPECIES	27	ENSGT00950000182997.a.b.b.b.a.b.h.b	ENSGT00940000155261.a.a.d	ENSGT00940000159366.f	ENSGT01010000230234	ENSGT00940000156009.A.d.t	ENSGT00940000154409.eb.a.d	ENSGT01090000259987.a.a.b.f	ENSGT00940000155440.c.b.h.a	ENSGT01100000263685.a	ENSGT00950000183017.b.b.a.b.a.e #8	ENSGT00940000156676.d.c #9	ENSGT00390000000705 #10	ENSGT00390000008767.p #11	ENSGT00940000154102.a.g.f	ENSGT00390000011228.a.a.f	ENSGT00940000155325.a.a.a.a.b.b #22	ENSGT00940000162464.n	ENSGT00940000161154.b.e	ENSGT00940000156977.f.b	ENSGT00940000153110.B.e.a	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b ##19	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e
Oncorhynchus	ANCESTRAL SPECIES	20	ENSGT00940000165418	ENSGT01060000252728	ENSGT00950000182997.a.b.b.b.a.b.h.b	ENSGT00940000155261.a.a.d	ENSGT01010000230234	ENSGT00940000156009.A.d.t	ENSGT00940000154409.eb.a.d	ENSGT01090000259987.a.a.b.f	ENSGT00940000155440.c.b.h.a	ENSGT01100000263685.a	ENSGT00950000183017.b.b.a.b.a.e #8	ENSGT00390000000705 #10	ENSGT00940000154102.a.g.f	ENSGT00390000011228.a.a.f	ENSGT01000000220699	ENSGT00940000155325.a.a.a.a.b.b #22	ENSGT00940000162464.n	ENSGT00940000161154.b.e	ENSGT00940000156977.f.b	ENSGT00940000153110.B.e.a	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b ##19	ENSGT00940000162649.e.a.b.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.e
Oncorhynchus_a	ANCESTRAL SPECIES	7	ENSGT00940000165418	ENSGT01060000252728	ENSGT00950000182997.a.b.b.b.a.b.h.b	ENSGT00940000155261.a.a.d	ENSGT01010000230234	ENSGT00940000156009.A.d.t	ENSGT00940000154409.eb.a.d	ENSGT01090000259987.a.a.b.f	ENSGT00940000155440.c.b.h.a	ENSGT01100000263685.a	ENSGT00950000183017.b.b.a.b.a.e #8	ENSGT00390000000705 #10	ENSGT00940000154102.a.g.f	ENSGT00390000011228.a.a.f	ENSGT01000000220699	ENSGT00940000155325.a.a.a.a.b.b #22	ENSGT00940000162464.n	ENSGT00940000161154.b.e	ENSGT00940000156977.f.b	ENSGT00940000153110.B.e.a	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b ##19	ENSGT00940000162649.e.a.b.a	ENSGT00940000162649.e.a.b.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b
Chinook salmon	MODERN SPECIES	7	ENSOTSG00005010400	ENSOTSG00005010401	ENSOTSG00005010402	dip2ba (ENSOTSG00005010419)	atf7a (ENSOTSG00005033003)	ENSOTSG00005033004	mpx (ENSOTSG00005033005)	ENSOTSG00005033006	ITGB7 (ENSOTSG00005033009)	pfkma (ENSOTSG00005033018)	ENSOTSG00005033057	def6a (ENSOTSG00005033058) #8	ENSOTSG00005033060 #10	ENSOTSG00005033062	ENSOTSG00005033064	MAPK14 (ENSOTSG00005033067) #22	ENSOTSG00005033108	ENSOTSG00005033109	irf2bp2a (ENSOTSG00005001945)	dclre1b (ENSOTSG00005002458)	TSPAN10 (ENSOTSG00005002467)	ENSOTSG00005002809	ENSOTSG00005002815	skia (ENSOTSG00005002821)	ENSOTSG00005002827 #37	lhfpl5b (ENSOTSG00005002839) #19	srpk1a (ENSOTSG00005002875)	fam50a (ENSOTSG00005004048)	tmed4 (ENSOTSG00005004052)	plpbp (ENSOTSG00005004055)	snrpg (ENSOTSG00005004057)
Rainbow trout	MODERN SPECIES	30	ENSOMYG00000069492	ENSOMYG00000021292	ENSOMYG00000021319	ENSOMYG00000022051	atf7a (ENSOMYG00000028468)	ENSOMYG00000028481	ENSOMYG00000028534	ENSOMYG00000028613	ENSOMYG00000077213	ENSOMYG00000028667	ENSOMYG00000028702 #8	fance (ENSOMYG00000028766) #10	ENSOMYG00000028778	zgc:195245 (ENSOMYG00000050893)	ENSOMYG00000028805	ENSOMYG00000001634 #22	tlr5 (ENSOMYG00000001670)	ENSOMYG00000001679	klf15 (ENSOMYG00000001746)	ENSOMYG00000001965	ENSOMYG00000077356 ##19	cyp2k5 (ENSOMYG00000002099)	ENSOMYG00000055096	ENSOMYG00000058331	ENSOMYG00000002157	ENSOMYG00000002738	zgc:171775 (ENSOMYG00000003062)	krt8 (ENSOMYG00000057091)	krt18a.1 (ENSOMYG00000003109)	krt18a.2 (ENSOMYG00000003124)	ENSOMYG00000003150
Salmo	ANCESTRAL SPECIES	16	ENSGT00950000182997.a.b.b.b.a.b.h.b	ENSGT00940000155261.a.a.d	ENSGT00940000159366.f	ENSGT01010000230234	ENSGT00940000156009.A.d.t	ENSGT00940000154409.eb.a.d	ENSGT00940000155440.c.b.h.a	ENSGT01100000263685.a	ENSGT00950000183017.b.b.a.b.a.e #8	ENSGT00940000156676.d.c #9	ENSGT00390000000705 #10	ENSGT00390000008767.p #11	ENSGT00940000154102.a.g.f	ENSGT00390000011228.a.a.f	ENSGT00940000155325.a.b.a.d #22	ENSGT00940000155325.a.a.a.a.b.b #22	ENSGT00940000162464.n	ENSGT00940000161154.b.e	ENSGT00940000156977.f.b	ENSGT00940000153110.B.e.a	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b ##19	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b	ENSGT00940000153336.a.a.f.a
River trout	MODERN SPECIES	20	ENSSTUG00000007045	mpx (ENSSTUG00000006142)	ENSSTUG00000006096	ENSSTUG00000006070	ENSSTUG00000006062	ENSSTUG00000006057	PFKM (ENSSTUG00000004333)	ENSSTUG00000004163	def6a (ENSSTUG00000003661) #8	ppardb (ENSSTUG00000022360) #9	ENSSTUG00000022348	fance (ENSSTUG00000022329) #10	ENSSTUG00000022320	RPL10A (ENSSTUG00000022306) #11	ENSSTUG00000022295	MAPK14 (ENSSTUG00000021878) #22	TLR5 (ENSSTUG00000021822)	ENSSTUG00000021810	klf15 (ENSSTUG00000021800)	ENSSTUG00000021778	ENSSTUG00000020535	LHFPL4 (ENSSTUG00000020494) ##19	ENSSTUG00000020433	ENSSTUG00000020393	ENSSTUG00000019840	zgc:171775 (ENSSTUG00000019693)	ENSSTUG00000019126	krt18a.1 (ENSSTUG00000019059)	krt18a.2 (ENSSTUG00000019021)	eif4ba (ENSSTUG00000018998)	ENSSTUG00000018846
Huchen	MODERN SPECIES	1153	ENSHHUG00000034232	asb8 (ENSHHUG00000034234)	mpx (ENSHHUG00000034250)	ENSHHUG00000034501	ENSHHUG00000034510	ENSHHUG00000034524	pfkma (ENSHHUG00000034570)	ENSHHUG00000036268	ENSHHUG00000036269	def6a (ENSHHUG00000036279) #8	ppardb (ENSHHUG00000036316) #9	ENSHHUG00000036321 #10	RPL10A (ENSHHUG00000036333) #11	ENSHHUG00000036373	ENSHHUG00000036384	MAPK14 (ENSHHUG00000036416) #22	TLR5 (ENSHHUG00000036489)	ENSHHUG00000036498
Northern pike	MODERN SPECIES	11	ENSELUG00000000395	ITGB7 (ENSELUG00000011177)	pfkma (ENSELUG00000011249)	ENSELUG00000011277	ENSELUG00000030242	def6a (ENSELUG00000011299) #8	ppardb (ENSELUG00000011315) #9	mkrn4 (ENSELUG00000011371)	fance (ENSELUG00000011398) #10	RPL10A (ENSELUG00000011426) #11	INAVA (ENSELUG00000011485)	zgc:195245 (ENSELUG00000011508)	ENSELUG00000011516	si:ch211-163l21.7 (ENSELUG00000011529)	ELAPOR1 (ENSELUG00000011599)	MAPK14 (ENSELUG00000011666) #22	ENSELUG00000001479	CHST13 (ENSELUG00000011711)	ENSELUG00000011748	ENSELUG00000011783	CPNE9 (ENSELUG00000011866)	LHFPL4 (ENSELUG00000011908) ##19	ENSELUG00000033176	ENSELUG00000025389	ENSELUG00000012148	ENSELUG00000012269	zgc:171775 (ENSELUG00000012345)	ENSELUG00000030245	krt8 (ENSELUG00000029935)	krt18a.2 (ENSELUG00000012444)	eif4ba (ENSELUG00000012490)
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.a.b #22
Pinecone sodierfish	MODERN SPECIES	21	atf7a (ENSMMDG00005018783)	asb8 (ENSMMDG00005018786)	LARP4 (ENSMMDG00005018789)	pfkma (ENSMMDG00005018794)	ENSMMDG00005018803	def6a (ENSMMDG00005018805) #8	ppardb (ENSMMDG00005018807) #9	mkrn4 (ENSMMDG00005018811)	fance (ENSMMDG00005018812) #10	rpl10a (ENSMMDG00005018817) #11	ENSMMDG00005018824	zgc:195245 (ENSMMDG00005018827)	smc5 (ENSMMDG00005018837)	ENSMMDG00005020360	ELAPOR1 (ENSMMDG00005020363)	MAPK14 (ENSMMDG00005020368) #22	srpk1a (ENSMMDG00005020398)	lhfpl5b (ENSMMDG00005020406) #19	cpne5a (ENSMMDG00005020409) #37	dclre1b (ENSMMDG00005020415)	adora1b (ENSMMDG00005020418)	mmp9 (ENSMMDG00005020423)	ZNF335 (ENSMMDG00005020440)	ENSMMDG00005020442	prok1 (ENSMMDG00005020445)	lamtor5 (ENSMMDG00005020447)	slc16a4 (ENSMMDG00005020448)	RBM15 (ENSMMDG00005020450)	ALX3 (ENSMMDG00005020451)	slc6a17 (ENSMMDG00005020455)	KCNC4 (ENSMMDG00005020457)
Osteoglossiformes	ANCESTRAL SPECIES	160	ENSGT01030000234578.B.b.a	ENSGT00950000183117.a.b.a.a	ENSGT00940000153544.a.i.b #32	ENSGT00390000007975.b #31	ENSGT00940000161251	ENSGT00940000158289.a.b	ENSGT00390000000819.b	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.c #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000162196	ENSGT00940000155325.a.a.a.a.b #22	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b
Asian bonytongue	MODERN SPECIES	11	fgf19 (ENSSFOG00015011821)	ccnd1 (ENSSFOG00015011800)	ENSSFOG00015011682	tprkb (ENSSFOG00015011656)	CPNE8 (ENSSFOG00015011574)	ENSSFOG00015015520	KIF21A (ENSSFOG00015015586)	ABCD2 (ENSSFOG00015015804)	SLC2A13 (ENSSFOG00015015834)	lrrk2 (ENSSFOG00015015869)	ENSSFOG00015015939	ENSSFOG00015028066	inavab (ENSSFOG00015023494)	GPR25 (ENSSFOG00015023506)	tmem167b (ENSSFOG00015028856)	MAPK14 (ENSSFOG00015023518) #22	srpk1b (ENSSFOG00015023536) #20	LHFPL5 (ENSSFOG00015023552) #19	KIF21B (ENSSFOG00015023566)	cpne5b (ENSSFOG00015023601) #37	ADORA1 (ENSSFOG00015023604)	ENSSFOG00015027013	ENSSFOG00015023606	myog (ENSSFOG00015023608)	ppfia4 (ENSSFOG00015023639)	tmem183a (ENSSFOG00015023690)	tfeb (ENSSFOG00015023709)	ENSSFOG00015000092	foxp4 (ENSSFOG00015000101)	zgc:101564 (ENSSFOG00015033196)	srgap2 (ENSSFOG00015000246)
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Percomorphaceae_B	ANCESTRAL SPECIES	3	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT01030000237351	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Ovalentaria	ANCESTRAL SPECIES	2	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Ovalentaria_B	ANCESTRAL SPECIES	5	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Pomacentridae	ANCESTRAL SPECIES	3	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Pomacentridae_A	ANCESTRAL SPECIES	2	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Amphiprion	ANCESTRAL SPECIES	11	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Clown anemonefish	MODERN SPECIES	3290			ube2j2 (ENSAOCG00000019487)	acap3b (ENSAOCG00000019473)	PUSL1 (ENSAOCG00000019419)	ddx19b (ENSAOCG00000019375)	ENSAOCG00000019318	camk2n1 (ENSAOCG00000001393)	ENSAOCG00000001388	ENSAOCG00000019284	cdab (ENSAOCG00000019261)	DNAJC16 (ENSAOCG00000019254)	b3galt6 (ENSAOCG00000019220)	ENSAOCG00000019210	tmem167b (ENSAOCG00000019120)	ENSAOCG00000019098 #22	srpk1b (ENSAOCG00000019057) #20
Orange clownfish	MODERN SPECIES	20	ENSAPEG00000005184	HIPK1 (ENSAPEG00000005291)	ube2j2 (ENSAPEG00000005340)	acap3b (ENSAPEG00000005354)	PUSL1 (ENSAPEG00000005452)	ddx19b (ENSAPEG00000005489)	ENSAPEG00000005533	camk2n1 (ENSAPEG00000005550)	ENSAPEG00000005577	ENSAPEG00000005612	cdab (ENSAPEG00000005654)	DNAJC16 (ENSAPEG00000005662)	b3galt6 (ENSAPEG00000005700)	ENSAPEG00000005717	tmem167b (ENSAPEG00000005767)	MAPK14 (ENSAPEG00000005804) #22	srpk1b (ENSAPEG00000005849) #20	LHFPL5 (ENSAPEG00000005891) #19	KIF21B (ENSAPEG00000005945)	cpne5b (ENSAPEG00000006049) #37	ADORA1 (ENSAPEG00000006116)	ENSAPEG00000006135	gnl3 (ENSAPEG00000006146)	glt8d1 (ENSAPEG00000006167)	spcs1 (ENSAPEG00000006221)	nek4 (ENSAPEG00000006227)	CAMK1 (ENSAPEG00000006241)	ccdc3b (ENSAPEG00000006290)	VAMP3 (ENSAPEG00000006319)	per3 (ENSAPEG00000006356)	mxra8a (ENSAPEG00000006423)
Cichlidae	ANCESTRAL SPECIES	1	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Pseudocrenilabrinae	ANCESTRAL SPECIES	4	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Nile tilapia	MODERN SPECIES	17	ENSONIG00000019368	HIPK1 (ENSONIG00000019367)	ENSONIG00000038646	ube2j2 (ENSONIG00000019365)	acap3b (ENSONIG00000019362)	pusl1 (ENSONIG00000019361)	ENSONIG00000036288	ddx19b (ENSONIG00000019360)	camk2n1 (ENSONIG00000019359)	ENSONIG00000019358	cdab (ENSONIG00000019357)	DNAJC16 (ENSONIG00000019355)	b3galt6 (ENSONIG00000021176)	ENSONIG00000039694	tmem167b (ENSONIG00000030784)	MAPK14 (ENSONIG00000019351) #22	srpk1b (ENSONIG00000019349) #20	LHFPL5 (ENSONIG00000027222) #19	KIF21B (ENSONIG00000019345)	cpne5b (ENSONIG00000019343) #37	ADORA1 (ENSONIG00000031348)	ENSONIG00000040241	ENSONIG00000019339	gnl3 (ENSONIG00000019335)	glt8d1 (ENSONIG00000019334)	spcs1 (ENSONIG00000030499)	nek4 (ENSONIG00000019332)	CAMK1 (ENSONIG00000019329)	ccdc3b (ENSONIG00000019327)	VAMP3 (ENSONIG00000019326)	per3 (ENSONIG00000019320)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	2	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00950000182934.a.b.h.b.d.c.a.a.b	ENSGT00940000158192	ENSGT00940000160817
Haplochromini	ANCESTRAL SPECIES	1	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320.s	ENSGT00940000158320.t	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00950000182934.a.b.h.b.d.c.a.a.b	ENSGT00940000158192
Burton s mouthbrooder	MODERN SPECIES	294	DNAJC11 (ENSHBUG00000001247)	ENSHBUG00000001249	HIPK1 (ENSHBUG00000001251)	ENSHBUG00000001253	ube2j2 (ENSHBUG00000001257)	acap3b (ENSHBUG00000001261)	PUSL1 (ENSHBUG00000001264)	ENSHBUG00000001267	ddx19b (ENSHBUG00000001269)	camk2n1 (ENSHBUG00000001270)	ENSHBUG00000001274	ENSHBUG00000001278	DNAJC16 (ENSHBUG00000001284)	b3galt6 (ENSHBUG00000001286)	tmem167b (ENSHBUG00000001289)	MAPK14 (ENSHBUG00000001295) #22	srpk1b (ENSHBUG00000001302) #20	LHFPL5 (ENSHBUG00000001304) #19	KIF21B (ENSHBUG00000001313)	cpne5b (ENSHBUG00000001327) #37	ADORA1 (ENSHBUG00000001334)	ENSHBUG00000001336	gnl3 (ENSHBUG00000001340)	glt8d1 (ENSHBUG00000001344)	spcs1 (ENSHBUG00000001347)	nek4 (ENSHBUG00000001353)	CAMK1 (ENSHBUG00000001357)	ccdc3b (ENSHBUG00000001361)	taar10a (ENSHBUG00000001363)
Haplochromini_A	ANCESTRAL SPECIES		ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320.s	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00950000182934.a.b.h.b.d.c.a.a.b	ENSGT00940000158192	ENSGT00940000160817
Haplochromini_B	ANCESTRAL SPECIES		ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320.s	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00950000182934.a.b.h.b.d.c.a.a.b	ENSGT00940000158192	ENSGT00940000160817
Eastern happy	MODERN SPECIES	17	ENSACLG00000008787	HIPK1 (ENSACLG00000008727)	ube2j2 (ENSACLG00000008713)	acap3b (ENSACLG00000008685)	PUSL1 (ENSACLG00000008675)	ENSACLG00000008667	ddx19b (ENSACLG00000008632)	camk2n1 (ENSACLG00000008614)	ENSACLG00000008608	ENSACLG00000008595	cdab (ENSACLG00000008576)	DNAJC16 (ENSACLG00000007778)	b3galt6 (ENSACLG00000007771)	ENSACLG00000007769	tmem167b (ENSACLG00000007760)	MAPK14 (ENSACLG00000007704) #22	srpk1b (ENSACLG00000007639) #20	LHFPL5 (ENSACLG00000007629) #19	KIF21B (ENSACLG00000007488)	cpne5b (ENSACLG00000007450) #37	ADORA1 (ENSACLG00000007432)	ENSACLG00000007425	gnl3 (ENSACLG00000007381)	glt8d1 (ENSACLG00000007359)	spcs1 (ENSACLG00000007351)	nek4 (ENSACLG00000007334)	CAMK1 (ENSACLG00000007267)	ccdc3b (ENSACLG00000007260)	taar10a (ENSACLG00000007248)	VAMP3 (ENSACLG00000006583)	per3 (ENSACLG00000006505)
Zebra mbuna	MODERN SPECIES	1108	HIPK1 (ENSMZEG00005026986)	ENSMZEG00005026987	ube2j2 (ENSMZEG00005026988)	acap3b (ENSMZEG00005026989)	PUSL1 (ENSMZEG00005026990)	ddx19b (ENSMZEG00005026991)	ENSMZEG00005026992	camk2n1 (ENSMZEG00005026993)	ENSMZEG00005026994	ENSMZEG00005026995	cdab (ENSMZEG00005026996)	DNAJC16 (ENSMZEG00005026997)	b3galt6 (ENSMZEG00005026998)	tmem167b (ENSMZEG00005026999)	ENSMZEG00005027000	MAPK14 (ENSMZEG00005027001) #22	srpk1b (ENSMZEG00005000055) #20	LHFPL5 (ENSMZEG00005000078) #19	ENSMZEG00005000090	VAMP3 (ENSMZEG00005000145)	ENSMZEG00005000184	ENSMZEG00005000256	mxra8a (ENSMZEG00005000310)	psma5 (ENSMZEG00005000324)	sort1a (ENSMZEG00005000388)	mdm4 (ENSMZEG00005000402)	myog (ENSMZEG00005000620)	ppfia4 (ENSMZEG00005000426)	tmem183a (ENSMZEG00005000632)	tfeb (ENSMZEG00005000676)	ENSMZEG00005000691
P. nyererei	MODERN SPECIES	337	DNAJC11 (ENSPNYG00000006354)	ENSPNYG00000006407	HIPK1 (ENSPNYG00000006455)	ube2j2 (ENSPNYG00000006496)	acap3b (ENSPNYG00000006524)	PUSL1 (ENSPNYG00000006588)	ddx19b (ENSPNYG00000006610)	ENSPNYG00000006637	camk2n1 (ENSPNYG00000006650)	ENSPNYG00000006793	ENSPNYG00000007611	cdab (ENSPNYG00000008101)	DNAJC16 (ENSPNYG00000008129)	b3galt6 (ENSPNYG00000008144)	tmem167b (ENSPNYG00000008153)	MAPK14 (ENSPNYG00000008186) #22	srpk1b (ENSPNYG00000008236) #20	LHFPL5 (ENSPNYG00000008268) #19	KIF21B (ENSPNYG00000008281)	cpne5b (ENSPNYG00000008353) #37
Lyretail cichlid	MODERN SPECIES	296	ENSNBRG00000014959	HIPK1 (ENSNBRG00000014900)	im:7152348 (ENSNBRG00000014879)	ube2j2 (ENSNBRG00000014856)	acap3b (ENSNBRG00000014797)	PUSL1 (ENSNBRG00000014762)	ENSNBRG00000014757	ddx19b (ENSNBRG00000014735)	camk2n1 (ENSNBRG00000014716)	ENSNBRG00000013880	ENSNBRG00000013704	cdab (ENSNBRG00000013678)	DNAJC16 (ENSNBRG00000013669)	b3galt6 (ENSNBRG00000013663)	tmem167b (ENSNBRG00000013654)	MAPK14 (ENSNBRG00000013617) #22	srpk1b (ENSNBRG00000013549) #20	LHFPL5 (ENSNBRG00000013532) #19	KIF21B (ENSNBRG00000013339)	cpne5b (ENSNBRG00000013277) #37	ADORA1 (ENSNBRG00000013258)	ENSNBRG00000013246	gnl3 (ENSNBRG00000013161)	glt8d1 (ENSNBRG00000013111)	spcs1 (ENSNBRG00000013100)	ENSNBRG00000013089	CAMK1 (ENSNBRG00000013059)	ccdc3b (ENSNBRG00000013033)	TAAR1 (ENSNBRG00000013018)	VAMP3 (ENSNBRG00000012994)	per3 (ENSNBRG00000012934)
Midas cichlid	MODERN SPECIES	826	HIPK1 (ENSACIG00000015340)	ube2j2 (ENSACIG00000015322)	acap3b (ENSACIG00000015283)	ENSACIG00000015278	PUSL1 (ENSACIG00000015240)	ddx19b (ENSACIG00000014804)	ENSACIG00000014757	camk2n1 (ENSACIG00000014750)	ENSACIG00000014722	cdab (ENSACIG00000014687)	ENSACIG00000014231	DNAJC16 (ENSACIG00000014037)	b3galt6 (ENSACIG00000014017)	ENSACIG00000014002	tmem167b (ENSACIG00000013991)	MAPK14 (ENSACIG00000013956) #22	srpk1b (ENSACIG00000013885) #20	LHFPL5 (ENSACIG00000013873) #19	KIF21B (ENSACIG00000013821)	cpne5b (ENSACIG00000013782) #37	ENSACIG00000013772	ADORA1 (ENSACIG00000013762)	ENSACIG00000013749	slc25a44b (ENSACIG00000013733)	PSMA4 (ENSACIG00000013719)	rbpms2a (ENSACIG00000013696)	cpeb1b (ENSACIG00000013675)	rps17 (ENSACIG00000013662)	csnk1g1 (ENSACIG00000013642)	SNX1 (ENSACIG00000013628)	neo1a (ENSACIG00000013586)
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Oryzias	ANCESTRAL SPECIES	1	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b
Oryzias_a	ANCESTRAL SPECIES	5	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958
Japanese Medaka HdrR	MODERN SPECIES	19	ENSORLG00000021915	ENSORLG00000023126	ENSORLG00000025730	ube2j2 (ENSORLG00000016301)	acap3b (ENSORLG00000016285)	PUSL1 (ENSORLG00000016228)	ENSORLG00000026307	ddx19b (ENSORLG00000016216)	camk2n1 (ENSORLG00000027774)	ENSORLG00000016184	ENSORLG00000016170	cdab (ENSORLG00000027661)	ENSORLG00000016147	ENSORLG00000027906	tmem167b (ENSORLG00000025009)	ENSORLG00000016122 #22	LHFPL5 (ENSORLG00000022304) #19	srpk1b (ENSORLG00000016119) #20	KIF21B (ENSORLG00000016093)	cpne5b (ENSORLG00000016068) #37	ADORA1 (ENSORLG00000016055)	ENSORLG00000022900	ccdc3b (ENSORLG00000016046)	CAMK1 (ENSORLG00000016042)	gnl3 (ENSORLG00000016030)	glt8d1 (ENSORLG00000016012)	spcs1 (ENSORLG00000015994)	nek4 (ENSORLG00000015988)	ENSORLG00000015979	psma5 (ENSORLG00000015965)	ENSORLG00000015958
Chinese medaka	MODERN SPECIES	12	ENSOSIG00000019421	HIPK1 (ENSOSIG00000019361)	ube2j2 (ENSOSIG00000019335)	acap3b (ENSOSIG00000018544)	PUSL1 (ENSOSIG00000018463)	ENSOSIG00000018462	ddx19b (ENSOSIG00000018047)	camk2n1 (ENSOSIG00000018009)	ENSOSIG00000018006	ENSOSIG00000018004	cdab (ENSOSIG00000018000)	DNAJC16 (ENSOSIG00000017623)	b3galt6 (ENSOSIG00000017602)	ENSOSIG00000017600	tmem167b (ENSOSIG00000017597)	ENSOSIG00000016523 #22	srpk1b (ENSOSIG00000016233) #20	LHFPL5 (ENSOSIG00000016226) #19	KIF21B (ENSOSIG00000011201)	cpne5b (ENSOSIG00000010921) #37	ENSOSIG00000010917	ADORA1 (ENSOSIG00000010916)	ENSOSIG00000010915	ccdc3b (ENSOSIG00000010914)	CAMK1 (ENSOSIG00000007938)	gnl3 (ENSOSIG00000007891)	glt8d1 (ENSOSIG00000007888)	spcs1 (ENSOSIG00000007887)	nek4 (ENSOSIG00000007886)	sort1a (ENSOSIG00000007705)	psma5 (ENSOSIG00000007696)
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Aplocheiloidei	ANCESTRAL SPECIES	12	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
Mangrove rivulus	MODERN SPECIES	236						PUSL1 (ENSKMAG00000005154)	ddx19b (ENSKMAG00000005196)	camk2n1 (ENSKMAG00000005258)	ENSKMAG00000005272	ENSKMAG00000005298	cdab (ENSKMAG00000005318)	DNAJC16 (ENSKMAG00000005333)	b3galt6 (ENSKMAG00000005355)	ENSKMAG00000005365	tmem167b (ENSKMAG00000005380)	MAPK14 (ENSKMAG00000005408) #22	srpk1b (ENSKMAG00000005453) #20	LHFPL5 (ENSKMAG00000005529) #19	KIF21B (ENSKMAG00000005590)	cpne5b (ENSKMAG00000005767) #37	ADORA1 (ENSKMAG00000005872)	ENSKMAG00000005886	ccdc3b (ENSKMAG00000005901)	CAMK1 (ENSKMAG00000005921)	gnl3 (ENSKMAG00000005965)	glt8d1 (ENSKMAG00000005982)	spcs1 (ENSKMAG00000006033)	nek4 (ENSKMAG00000006010)	sort1a (ENSKMAG00000006052)	psma5 (ENSKMAG00000006090)	mxra8a (ENSKMAG00000006129)
Percomorphaceae_C	ANCESTRAL SPECIES	1	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT01030000237351	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Eupercaria	ANCESTRAL SPECIES		ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Eupecaria_A	ANCESTRAL SPECIES		ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Ballan wrasse	MODERN SPECIES	66	c1galt1la (ENSLBEG00000007655)	tac3a (ENSLBEG00000007688)	ZNF385A (ENSLBEG00000007732)	birc5b (ENSLBEG00000007810)	neurod4 (ENSLBEG00000007823)	zgc:153867 (ENSLBEG00000007867)	C1QL4 (ENSLBEG00000007940)	tmem9 (ENSLBEG00000007963)	cacna1sb (ENSLBEG00000008227)	smc1al (ENSLBEG00000008930)	ribc1 (ENSLBEG00000009076)	l1cama (ENSLBEG00000009181)	HUWE1 (ENSLBEG00000009745)	phf8 (ENSLBEG00000010679)	tmem167b (ENSLBEG00000010814)	MAPK14 (ENSLBEG00000010849) #22	srpk1b (ENSLBEG00000010938) #20	LHFPL5 (ENSLBEG00000011019) #19	KIF21B (ENSLBEG00000011058)	cpne5b (ENSLBEG00000011233) #37	ADORA1 (ENSLBEG00000011329)	ENSLBEG00000011361	ENSLBEG00000011372	gnl3 (ENSLBEG00000011394)	glt8d1 (ENSLBEG00000011428)	spcs1 (ENSLBEG00000011458)	nek4 (ENSLBEG00000011549)	CAMK1 (ENSLBEG00000011700)	ccdc3b (ENSLBEG00000011735)	ENSLBEG00000011760	per3 (ENSLBEG00000011813)
Eupecaria_B	ANCESTRAL SPECIES	2	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Perciformes	ANCESTRAL SPECIES		ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Cottioidei	ANCESTRAL SPECIES		ENSGT00860000133842.m	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT00390000018096	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192
Stickleback	MODERN SPECIES	17	PHF13 (ENSGACG00000007946)	DNAJC11 (ENSGACG00000007927)	ENSGACG00000007914	HIPK1 (ENSGACG00000007904)	ube2j2 (ENSGACG00000007882)	acap3b (ENSGACG00000007862)	PUSL1 (ENSGACG00000007848)	ddx19b (ENSGACG00000007778)	camk2n1 (ENSGACG00000007772)	ENSGACG00000007768	ENSGACG00000007751	cdab (ENSGACG00000007730)	DNAJC16 (ENSGACG00000007720)	b3galt6 (ENSGACG00000007716)	ENSGACG00000007713	MAPK14 (ENSGACG00000007676) #22	srpk1b (ENSGACG00000007667) #20	LHFPL5 (ENSGACG00000007658) #19	KIF21B (ENSGACG00000007609)	ENSGACG00000007607	cpne5b (ENSGACG00000007585) #37	errfi1a (ENSGACG00000007583)	tas1r3 (ENSGACG00000007555)	odad1 (ENSGACG00000007539)	ENSGACG00000007536	slc45a1 (ENSGACG00000007531)	prxl2b (ENSGACG00000007519)	MMEL1 (ENSGACG00000007481)	ENSGACG00000007471	tnfrsf1b (ENSGACG00000007465)	trim62.1 (ENSGACG00000007462)
Perciformes_a	ANCESTRAL SPECIES	5	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Pike perch	MODERN SPECIES	11	ENSSLUG00000000196	ENSSLUG00000017888	ENSSLUG00000017880	ube2j2 (ENSSLUG00000017874)	acap3b (ENSSLUG00000017596)	PUSL1 (ENSSLUG00000017521)	ENSSLUG00000017495	ddx19b (ENSSLUG00000016739)	camk2n1 (ENSSLUG00000016704)	ENSSLUG00000016698	ENSSLUG00000016664	cdab (ENSSLUG00000016657)	DNAJC16 (ENSSLUG00000016590)	b3galt6 (ENSSLUG00000016561)	tmem167b (ENSSLUG00000016555)	MAPK14 (ENSSLUG00000015633) #22	srpk1b (ENSSLUG00000015131) #20	LHFPL5 (ENSSLUG00000015095) #19	KIF21B (ENSSLUG00000013640)	cpne5b (ENSSLUG00000013499) #37	ADORA1 (ENSSLUG00000013472)	ENSSLUG00000013469	gnl3 (ENSSLUG00000013454)	glt8d1 (ENSSLUG00000013440)	spcs1 (ENSSLUG00000013429)	nek4 (ENSSLUG00000013427)	CAMK1 (ENSSLUG00000011648)	ccdc3b (ENSSLUG00000011565)	VAMP3 (ENSSLUG00000011560)	per3 (ENSSLUG00000011504)	mxra8a (ENSSLUG00000011487)
Channel bull blenny	MODERN SPECIES	19	ENSCGOG00000000278	HIPK1 (ENSCGOG00000000392)	ENSCGOG00000000831	ube2j2 (ENSCGOG00000000832)	acap3b (ENSCGOG00000000892)	PUSL1 (ENSCGOG00000001337)	ddx19b (ENSCGOG00000001386)	ENSCGOG00000001993	camk2n1 (ENSCGOG00000001994)	ENSCGOG00000001998	ENSCGOG00000002010	cdab (ENSCGOG00000002198)	DNAJC16 (ENSCGOG00000002241)	b3galt6 (ENSCGOG00000002523)	tmem167b (ENSCGOG00000002525)	MAPK14 (ENSCGOG00000002573) #22	srpk1b (ENSCGOG00000004632) #20	LHFPL5 (ENSCGOG00000004788) #19	KIF21B (ENSCGOG00000004827)	cpne5b (ENSCGOG00000006383) #37	ENSCGOG00000006495	ADORA1 (ENSCGOG00000006496)	ENSCGOG00000006498	gnl3 (ENSCGOG00000006499)	glt8d1 (ENSCGOG00000006510)	spcs1 (ENSCGOG00000006514)	nek4 (ENSCGOG00000006517)	CAMK1 (ENSCGOG00000006541)	ccdc3b (ENSCGOG00000007905)	VAMP3 (ENSCGOG00000007908)	ENSCGOG00000007911
Eupecaria_C	ANCESTRAL SPECIES		ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Eupercaria_incertae_sedis	ANCESTRAL SPECIES		ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00940000157448	ENSGT00390000018321	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
European seabass	MODERN SPECIES	10	ENSDLAG00005006775	ENSDLAG00005006872	ENSDLAG00005006902	acap3b (ENSDLAG00005007900)	ENSDLAG00005011505	DDX19B (ENSDLAG00005017452)	ENSDLAG00005033301	CAMK2N2 (ENSDLAG00005032701)	ENSDLAG00005011526	ENSDLAG00005011535	cdab (ENSDLAG00005011548)	ENSDLAG00005011557	B3GALT6 (ENSDLAG00005031283)	ENSDLAG00005032396	tmem167b (ENSDLAG00005030457)	MAPK14A (ENSDLAG00005011756) #22	SRPK1B (ENSDLAG00005012148) #20	ENSDLAG00005033954 #19	ENSDLAG00005012491	cpne5b (ENSDLAG00005018009) #37	ENSDLAG00005018866	ENSDLAG00005034562	ENSDLAG00005034952	ENSDLAG00005018895	nek4 (ENSDLAG00005018948)	spcs1 (ENSDLAG00005018939)	ENSDLAG00005019005	ccdc3b (ENSDLAG00005032781)	ENSDLAG00005030536	ENSDLAG00005020421	ENSDLAG00005020764
Large yellow croaker	MODERN SPECIES	478	HIPK1 (ENSLCRG00005006568)	ENSLCRG00005006566	ube2j2 (ENSLCRG00005006565)	acap3b (ENSLCRG00005005248)	PUSL1 (ENSLCRG00005005241)	ENSLCRG00005005240	ddx19b (ENSLCRG00005004450)	camk2n1 (ENSLCRG00005004422)	ENSLCRG00005004420	ENSLCRG00005004416	cdab (ENSLCRG00005004415)	DNAJC16 (ENSLCRG00005004410)	b3galt6 (ENSLCRG00005004407)	ENSLCRG00005004405	tmem167b (ENSLCRG00005004403)	MAPK14 (ENSLCRG00005004242) #22	srpk1b (ENSLCRG00005003499) #20	ENSLCRG00005003489 #19	KIF21B (ENSLCRG00005001804)	cpne5b (ENSLCRG00005010373) #37	ADORA1 (ENSLCRG00005010345)	ENSLCRG00005010343	gnl3 (ENSLCRG00005010337)	glt8d1 (ENSLCRG00005010333)	nek4 (ENSLCRG00005010327)	spcs1 (ENSLCRG00005010324)	CAMK1 (ENSLCRG00005008227)	ccdc3b (ENSLCRG00005008212)	ENSLCRG00005008211	ENSLCRG00005008208	appl1 (ENSLCRG00005007929)
Gilthead seabream	MODERN SPECIES	20	HIPK1 (ENSSAUG00010019222)	ENSSAUG00010019198	ube2j2 (ENSSAUG00010019196)	acap3b (ENSSAUG00010017598)	PUSL1 (ENSSAUG00010017571)	ENSSAUG00010017570	ddx19b (ENSSAUG00010016915)	camk2n1 (ENSSAUG00010016907)	ENSSAUG00010016906	ENSSAUG00010016905	cdab (ENSSAUG00010016904)	DNAJC16 (ENSSAUG00010015826)	b3galt6 (ENSSAUG00010015784)	ENSSAUG00010015778	tmem167b (ENSSAUG00010015777)	ENSSAUG00010015500 #22	srpk1b (ENSSAUG00010015427) #20	ENSSAUG00010015421 #19	KIF21B (ENSSAUG00010014188)	cpne5b (ENSSAUG00010013737) #37	ADORA1 (ENSSAUG00010013730)	ENSSAUG00010013728	gnl3 (ENSSAUG00010013725)	glt8d1 (ENSSAUG00010013719)	spcs1 (ENSSAUG00010013716)	nek4 (ENSSAUG00010013715)	CAMK1 (ENSSAUG00010011592)	ccdc3b (ENSSAUG00010011556)	VAMP3 (ENSSAUG00010011555)	per3 (ENSSAUG00010011519)	mxra8a (ENSSAUG00010011512)
Percomorphaceae_D	ANCESTRAL SPECIES	3	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Pleuronectoidei	ANCESTRAL SPECIES	4	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Turbot	MODERN SPECIES	18	ENSSMAG00000007266	UBE2J2 (ENSSMAG00000007238)	acap3b (ENSSMAG00000007200)	PUSL1 (ENSSMAG00000007187)	ENSSMAG00000007347	ENSSMAG00000007181	ddx19b (ENSSMAG00000007155)	camk2n1 (ENSSMAG00000007116)	ENSSMAG00000007108	ENSSMAG00000007097	cdab (ENSSMAG00000007092)	ENSSMAG00000007071	ENSSMAG00000007066	tmem167b (ENSSMAG00000007059)	ENSSMAG00000007030	ENSSMAG00000006989 #22	srpk1b (ENSSMAG00000006937) #20	ENSSMAG00000006924 #19	ENSSMAG00000006816	cpne5b (ENSSMAG00000006712) #37	ENSSMAG00000035151	ENSSMAG00000006698	ENSSMAG00000026345	gnl3 (ENSSMAG00000006662)	ENSSMAG00000006652	spcs1 (ENSSMAG00000006641)	ENSSMAG00000006628	ENSSMAG00000006586	ENSSMAG00000006610	ENSSMAG00000006551	ccdc3b (ENSSMAG00000006532)
Anabantaria	ANCESTRAL SPECIES		ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Zig-zag eel	MODERN SPECIES	19	ENSMAMG00000025406	ENSMAMG00000016666	ENSMAMG00000025803	UBE2J2 (ENSMAMG00000028182)	acap3b (ENSMAMG00000016589)	PUSL1 (ENSMAMG00000028473)	ddx19b (ENSMAMG00000016547)	ENSMAMG00000016566	camk2n1 (ENSMAMG00000016531)	ENSMAMG00000016516	ENSMAMG00000009290	cdab (ENSMAMG00000009232)	ENSMAMG00000027012	b3galt6 (ENSMAMG00000009214)	tmem167b (ENSMAMG00000009193)	ENSMAMG00000009135 #22	srpk1b (ENSMAMG00000009095) #20	ENSMAMG00000009080 #19	ENSMAMG00000008989	cpne5b (ENSMAMG00000008949) #37	ENSMAMG00000008927	ENSMAMG00000028498	gnl3 (ENSMAMG00000008904)	glt8d1 (ENSMAMG00000008882)	spcs1 (ENSMAMG00000008837)	nek4 (ENSMAMG00000008810)	ENSMAMG00000008750	ccdc3b (ENSMAMG00000008720)	ENSMAMG00000025420	ENSMAMG00000008565	ENSMAMG00000008529
Anabantoidei	ANCESTRAL SPECIES	1	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000237351	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Climbing perch	MODERN SPECIES	18	ENSATEG00000024129	ENSATEG00000024137	UBE2J2 (ENSATEG00000024138)	acap3b (ENSATEG00000024143)	PUSL1 (ENSATEG00000024154)	ddx19b (ENSATEG00000024160)	ENSATEG00000026803	camk2n1 (ENSATEG00000024164)	ENSATEG00000024167	ENSATEG00000024169	cdab (ENSATEG00000024180)	cdab (ENSATEG00000024173)	ENSATEG00000024184	b3galt6 (ENSATEG00000024188)	tmem167b (ENSATEG00000030152)	ENSATEG00000024195 #22	srpk1b (ENSATEG00000024199) #20	ENSATEG00000026492 #19	ENSATEG00000024215	cpne5b (ENSATEG00000024233) #37	ENSATEG00000024238	ENSATEG00000024241	gnl3 (ENSATEG00000024242)	glt8d1 (ENSATEG00000024247)	spcs1 (ENSATEG00000028514)	nek4 (ENSATEG00000024250)	ENSATEG00000024260	ccdc3b (ENSATEG00000024272)	VAMP3 (ENSATEG00000024274)	ENSATEG00000024276	ENSATEG00000024283
Siamese fighting fish	MODERN SPECIES	16	DNAJC11 (ENSBSLG00000002439)	ENSBSLG00000002509	HIPK1 (ENSBSLG00000002650)	ENSBSLG00000003012	ube2j2 (ENSBSLG00000003599)	acap3b (ENSBSLG00000004188)	PUSL1 (ENSBSLG00000006039)	ddx19b (ENSBSLG00000006675)	ENSBSLG00000007208	camk2n1 (ENSBSLG00000007214)	ENSBSLG00000007216	ENSBSLG00000007222	DNAJC16 (ENSBSLG00000007292)	b3galt6 (ENSBSLG00000007512)	tmem167b (ENSBSLG00000007516)	MAPK14 (ENSBSLG00000007528) #22	srpk1b (ENSBSLG00000007932) #20	ENSBSLG00000008039 #19	KIF21B (ENSBSLG00000008157)	cpne5b (ENSBSLG00000011475) #37	ADORA1 (ENSBSLG00000012920)	ENSBSLG00000012929	gnl3 (ENSBSLG00000012933)	glt8d1 (ENSBSLG00000012946)	spcs1 (ENSBSLG00000012965)	nek4 (ENSBSLG00000012970)	CAMK1 (ENSBSLG00000012979)	ccdc3b (ENSBSLG00000013025)	VAMP3 (ENSBSLG00000013028)	per3 (ENSBSLG00000013174)	ENSBSLG00000013424
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.a.b #22
Electric eel	MODERN SPECIES	444				ENSEEEG00000008520	ENSEEEG00000008051	ENSEEEG00000008039	camk2n1 (ENSEEEG00000008036)	ENSEEEG00000008034	ddx19b (ENSEEEG00000007113)	PUSL1 (ENSEEEG00000007058)	acap3b (ENSEEEG00000007054)	UBE2J2 (ENSEEEG00000007051)	HIPK1 (ENSEEEG00000007035)	b3galt6 (ENSEEEG00000007029)	tmem167b (ENSEEEG00000007027)	ENSEEEG00000006969 #22	srpk1b (ENSEEEG00000006954) #20	LHFPL5 (ENSEEEG00000006952) #19	KIF21B (ENSEEEG00000006950)	cpne5b (ENSEEEG00000006942) #37	ADORA1 (ENSEEEG00000006939)	ENSEEEG00000006938
Clupeiformes	ANCESTRAL SPECIES	151	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01090000260288	ENSGT00940000154417.d	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000169818	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000166975.j	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT00950000183124.A	ENSGT00940000157261.l	ENSGT00940000159878
Atlantic herring	MODERN SPECIES	21	cdab (ENSCHAG00000011350)	ENSCHAG00000011357	ENSCHAG00000011386	camk2n1 (ENSCHAG00000011391)	ddx19b (ENSCHAG00000011418)	ENSCHAG00000011872	PUSL1 (ENSCHAG00000011890)	acap3b (ENSCHAG00000012049)	ENSCHAG00000017034	UBE2J2 (ENSCHAG00000017051)	ENSCHAG00000017090	HIPK1 (ENSCHAG00000017125)	ENSCHAG00000017327	b3galt6 (ENSCHAG00000017337)	tmem167b (ENSCHAG00000017344)	ENSCHAG00000017373 #22	srpk1b (ENSCHAG00000017518) #20	LHFPL5 (ENSCHAG00000018795) #19	KIF21B (ENSCHAG00000018875)	cpne5b (ENSCHAG00000020549) #37	ENSCHAG00000020914	ADORA1 (ENSCHAG00000020935)	ENSCHAG00000020941	CHIA (ENSCHAG00000020962)	ENSCHAG00000021040	CHIA (ENSCHAG00000021119)	slc6a14 (ENSCHAG00000021299)	fmoda (ENSCHAG00000021307)	zgc:113307 (ENSCHAG00000021316)	PRELP (ENSCHAG00000021339)	il19l (ENSCHAG00000021347)
Osteoglossocephalai	ANCESTRAL SPECIES	350													ENSGT00940000159912	ENSGT00390000004735.C	ENSGT00940000156669.a	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a
Osteoglossiformes	ANCESTRAL SPECIES	480																ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175
P. kingsleyae	MODERN SPECIES	302	ENSPKIG00000001272	ENSPKIG00000001250	ENSPKIG00000001214	ENSPKIG00000001146	ENSPKIG00000001120	ENSPKIG00000001104	ENSPKIG00000001057	ENSPKIG00000000989	ENSPKIG00000000941	p4htma (ENSPKIG00000000917)	slc26a6l (ENSPKIG00000000870)	kbtbd12 (ENSPKIG00000000831)	ENSPKIG00000024466	ENSPKIG00000024451	GPR25 (ENSPKIG00000024445)	MAPK14 (ENSPKIG00000024422) #22	srpk1a (ENSPKIG00000024378)	LHFPL5 (ENSPKIG00000024356) #19	KIF21B (ENSPKIG00000024261)	cpne5b (ENSPKIG00000024212) #37	ADORA1 (ENSPKIG00000024204)	ENSPKIG00000024160	ENSPKIG00000024151	ENSPKIG00000024145
Clupeocephala	ANCESTRAL SPECIES	119			ENSGT00940000158289.a.b.b	ENSGT00390000000819.b	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00530000063722.a	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669
Otomorpha	ANCESTRAL SPECIES	171								ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669
Clupeiformes	ANCESTRAL SPECIES	2	ENSGT00940000165056.b	ENSGT00940000166378	ENSGT00940000165955.b	ENSGT00940000157682.A	ENSGT00940000160063.g.b	ENSGT00940000153634.a	ENSGT01030000234564.a.a.b.a.f	ENSGT00950000183062.a.b.b.a	ENSGT00940000156676.d #9	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975.i	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Denticle herring	MODERN SPECIES	1	ENSDCDG00000028173	SLC38A5 (ENSDCDG00000025798)	apex2 (ENSDCDG00000025749)	zgc:162200 (ENSDCDG00000025745)	renbp (ENSDCDG00000025727)	kdm5c (ENSDCDG00000023187)	porcn (ENSDCDG00000023156)	PDZD4 (ENSDCDG00000023153)	ppardb (ENSDCDG00000023150) #9	fance (ENSDCDG00000023149) #10	rpl10a (ENSDCDG00000023128) #11	ENSDCDG00000023124	zgc:195245 (ENSDCDG00000023120)	ENSDCDG00000023111	ELAPOR1 (ENSDCDG00000023069)	ENSDCDG00000020132 #22	srpk1a (ENSDCDG00000016966)	lhfpl5b (ENSDCDG00000016921) #19	CLPS (ENSDCDG00000016916) #18	cpne5a (ENSDCDG00000016801) #37	dclre1b (ENSDCDG00000016789)	adora1b (ENSDCDG00000016788)	mmp9 (ENSDCDG00000015570)	ZNF335 (ENSDCDG00000015315)	PGA4 (ENSDCDG00000014358)	prok1 (ENSDCDG00000014292)	lamtor5 (ENSDCDG00000014284)	slc16a4 (ENSDCDG00000014270)	ENSDCDG00000014262	ALX3 (ENSDCDG00000014257)	slc6a17 (ENSDCDG00000013779)
Otophysi	ANCESTRAL SPECIES	65	ENSGT00940000154468.tb.b.b	ENSGT00390000015805.b	ENSGT00940000157898	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00940000159173	ENSGT00940000161209	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000165930.B	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b
Characiphysae	ANCESTRAL SPECIES	30	ENSGT00940000154468.tb.b.b	ENSGT00390000015805.b	ENSGT00940000157898	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00940000159173	ENSGT00940000161209	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000165930.B	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036.c.b	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b
Channel catfish	MODERN SPECIES	24	sema3gb (ENSIPUG00000000541)	WAS (ENSIPUG00000000568)	SLC38A3 (ENSIPUG00000000602)	ENSIPUG00000000644	ccdc22 (ENSIPUG00000000650)	nt5dc2 (ENSIPUG00000000667)	tbc1d25 (ENSIPUG00000000683)	cfp (ENSIPUG00000000699)	ppard (ENSIPUG00000000702) #9	mkrn4 (ENSIPUG00000000711)	fance (ENSIPUG00000000720) #10	rpl10a (ENSIPUG00000000731) #11	ENSIPUG00000000762	c5h1orf194 (ENSIPUG00000000768)	kiaa1324 (ENSIPUG00000000782)	MAPK14 (ENSIPUG00000000798) #22	srpk1a (ENSIPUG00000000830)	lhfpl5b (ENSIPUG00000000841) #19	clps (ENSIPUG00000000843) #18	adora1b (ENSIPUG00000000851)	dclre1b (ENSIPUG00000000854)	cpne5a (ENSIPUG00000000871) #37	ENSIPUG00000000973	col (ENSIPUG00000000976) #18	lhfpl5b (ENSIPUG00000000993) #19	ENSIPUG00000001014	SLC16A1 (ENSIPUG00000001030)	zmynd12 (ENSIPUG00000001040)	rimkla (ENSIPUG00000001046)	ENSIPUG00000001052	kazna (ENSIPUG00000001058)
Characiphysae_b	ANCESTRAL SPECIES	34	ENSGT00940000154468.tb.b.b	ENSGT00390000015805.b	ENSGT00940000157898	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00940000159173	ENSGT00940000161209	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644 #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000165930.B	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036.d	ENSGT00940000155036.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b
Characoidei	ANCESTRAL SPECIES	109	ENSGT00940000154468.tb.b.b	ENSGT00390000015805.b	ENSGT00940000157898	ENSGT00940000154471.a.a	ENSGT00940000164911	ENSGT00940000159173	ENSGT00940000161209	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00390000012644.g #18	ENSGT00390000012644.h #18	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000165930.B	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000155036.c.b	ENSGT00940000155036.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411
Red-bellied piranha	MODERN SPECIES	470	ENSPNAG00000017306	slc38a5b (ENSPNAG00000017364)	ccdc22 (ENSPNAG00000017699)	nt5dc2 (ENSPNAG00000017838)	tbc1d25 (ENSPNAG00000017866)	cfp (ENSPNAG00000003501)	ppardb (ENSPNAG00000017903) #9	mkrn4 (ENSPNAG00000017925)	fance (ENSPNAG00000017940) #10	rpl10a (ENSPNAG00000017943) #11	ENSPNAG00000017968	ENSPNAG00000017974	zgc:195245 (ENSPNAG00000017998)	si:ch211-163l21.7 (ENSPNAG00000018004)	ELAPOR1 (ENSPNAG00000018014)	MAPK14 (ENSPNAG00000018072) #22	srpk1a (ENSPNAG00000018135)	lhfpl5b (ENSPNAG00000018157) #19	CLPS (ENSPNAG00000018178) #18	ENSPNAG00000018217	ENSPNAG00000018224 #18
Electric eel	MODERN SPECIES	807										mkrn4 (ENSEEEG00000007210)	fance (ENSEEEG00000007211) #10	rpl10a (ENSEEEG00000007214) #11	ENSEEEG00000007259	si:ch211-163l21.7 (ENSEEEG00000007263)	ELAPOR1 (ENSEEEG00000007264)	MAPK14 (ENSEEEG00000007292) #22	srpk1a (ENSEEEG00000007665)	lhfpl5b (ENSEEEG00000008233) #19	CLPS (ENSEEEG00000008234) #18	cpne5a (ENSEEEG00000008238) #37	dclre1b (ENSEEEG00000008244)
Cyprinoidei	ANCESTRAL SPECIES	7	ENSGT00940000165056.a	ENSGT00730000110895.b.b.c	ENSGT00940000166636	ENSGT00390000003809	ENSGT00940000164911	ENSGT00940000159173	ENSGT00940000161209	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000165930.B	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	6	ENSGT00730000110895.b.b.c.b	ENSGT00940000166636.c	ENSGT00390000003809.f	ENSGT00940000164911.i	ENSGT00940000159173.e	ENSGT00940000161209.d	ENSGT00940000156676.d.a #9	ENSGT00950000183077.b.b	ENSGT00390000000705.a #10	ENSGT00390000008767.r #11	ENSGT00940000154102.a.g.a.a	ENSGT00390000011228.a.a.b	ENSGT01030000234625.A.c.a	ENSGT00940000156861.a	ENSGT00940000154427.A.e	ENSGT00940000155325.a.a.b.a #22	ENSGT00940000166975.g	ENSGT00990000203541.a.a.b.g.c #19
Goldfish	MODERN SPECIES	2232														ELAPOR1 (ENSCARG00000036490)	ENSCARG00000036739	MAPK14 (ENSCARG00000036838) #22	srpk1a (ENSCARG00000038135)
Cyprininae_a	ANCESTRAL SPECIES	190	ENSGT00940000164911.i	ENSGT00940000159173.e	ENSGT00940000161209.d	ENSGT00940000156676.d.a #9	ENSGT00950000183077.b.b	ENSGT00390000000705.a #10	ENSGT00390000008767.r #11	ENSGT00940000154102.a.g.a.a	ENSGT01030000234625.A.c.a	ENSGT00530000063722.a.eb	ENSGT00940000154102.a.g.b	ENSGT00390000011228.a.a.b	ENSGT01030000234625.A.d	ENSGT00940000156861.a	ENSGT00940000154427.A.e	ENSGT00940000155325.a.a.b.a #22	ENSGT00940000166975.g	ENSGT00990000203541.a.a.b.g.c #19	ENSGT00940000156194.m.a.b #37	ENSGT00940000158175.b	ENSGT01030000234555.a.a.b.a.a.a.a.b	ENSGT00940000165930.B.t	ENSGT00940000157415.h	ENSGT00940000158508.j	ENSGT00940000166935.a
Common carp reference	MODERN SPECIES	23	sema3gb (ENSCCRG00000047754)	wasb (ENSCCRG00000048673)	slc38a5b (ENSCCRG00000048683)	ccdc22 (ENSCCRG00000050028)	nt5dc2 (ENSCCRG00000001386)	tbc1d25 (ENSCCRG00000081033)	ENSCCRG00000074591	ppardb (ENSCCRG00000050104) #9	mkrn4 (ENSCCRG00000058734)	fance (ENSCCRG00000050167) #10	rpl10a (ENSCCRG00000073150) #11	ENSCCRG00000050215	si:ch211-163l21.7 (ENSCCRG00000008050)	ENSCCRG00000008100	ENSCCRG00000061142	ENSCCRG00000011952 #22	srpk1a (ENSCCRG00000012836)	lhfpl5b (ENSCCRG00000004971) #19	ENSCCRG00000066748	cpne5a (ENSCCRG00000055259) #37	dclre1b (ENSCCRG00000025460)	adora1b (ENSCCRG00000071109)	ENSCCRG00000055657	zgc:110353 (ENSCCRG00000028268)	mmp9 (ENSCCRG00000027829)	ENSCCRG00000066767	prok1 (ENSCCRG00000028271)	lamtor5 (ENSCCRG00000070860)	slc16a4 (ENSCCRG00000028285)	RBM15 (ENSCCRG00000029370)	ENSCCRG00000028298
Golden-line barbel	MODERN SPECIES	383	sema3gb (ENSSGRG00000009605)	wasb (ENSSGRG00000009595)	slc38a5b (ENSSGRG00000008606)	ccdc22 (ENSSGRG00000008335)	tbc1d25 (ENSSGRG00000008331)	ENSSGRG00000008330	ppardb (ENSSGRG00000008305) #9	mkrn4 (ENSSGRG00000008304)	fance (ENSSGRG00000008303) #10	rpl10a (ENSSGRG00000008214) #11	ENSSGRG00000008208	ENSSGRG00000008206	zgc:195245 (ENSSGRG00000008204)	si:ch211-163l21.7 (ENSSGRG00000008201)	ELAPOR1 (ENSSGRG00000008161)	MAPK14 (ENSSGRG00000003893) #22	srpk1a (ENSSGRG00000002309)	lhfpl5b (ENSSGRG00000002295) #19
Cyprininae	ANCESTRAL SPECIES	37	ENSGT00940000165056.a.a	ENSGT00730000110895.b.b.c.a	ENSGT00940000166636.d	ENSGT00390000003809.e	ENSGT00940000164911.j	ENSGT00940000159173.f	ENSGT00940000161209.c	ENSGT00940000156676.d.b #9	ENSGT00950000183077.b.a	ENSGT00390000000705.b #10	ENSGT00390000008767.q #11	ENSGT00940000154102.a.g.a.b	ENSGT00390000011228.a.a.a	ENSGT01030000234625.A.c.b	ENSGT00940000156861.b	ENSGT00940000155325.a.a.b.b #22	ENSGT00940000166975.h	ENSGT00990000203541.a.a.b.g.d #19	ENSGT00940000156194.m.a.a #37	ENSGT00940000158175.a	ENSGT01030000234555.a.a.b.a.a.a.a.a	ENSGT00940000165930.B.s	ENSGT00940000157415.g	ENSGT00940000158508.i	ENSGT00940000166935.b	ENSGT00940000156194.m.a.b #37	ENSGT00940000158175.b	ENSGT01030000234555.a.a.b.a.a.a.a.b	ENSGT00940000165930.B.t	ENSGT00940000157415.h	ENSGT00940000158508.j
Cyprininae_a	ANCESTRAL SPECIES	39	ENSGT00940000165955.a.a	ENSGT00940000165056.a.a	ENSGT00730000110895.b.b.c.a	ENSGT00940000166636.d	ENSGT00390000003809.e	ENSGT00940000164911.j	ENSGT00940000159173.f	ENSGT00940000161209.c	ENSGT00940000156676.d.b #9	ENSGT00950000183077.b.a	ENSGT00390000000705.b #10	ENSGT00390000008767.q #11	ENSGT00940000154102.a.g.a.b	ENSGT00390000011228.a.a.a	ENSGT00940000156861.b	ENSGT00940000155325.a.a.b.b #22	ENSGT00940000166975.h	ENSGT00990000203541.a.a.b.g.d #19	ENSGT00940000156194.m.a.a #37	ENSGT00940000158175.a	ENSGT01030000234555.a.a.b.a.a.a.a.a	ENSGT00940000165930.B.s	ENSGT00940000157415.g	ENSGT00940000158508.i	ENSGT00940000166935.b	ENSGT00390000006247	ENSGT00940000158411.b	ENSGT00940000158161.e.b.e	ENSGT00940000160669.a.a	ENSGT00940000156542.a.a	ENSGT00940000158860.g
Common carp reference	MODERN SPECIES	17	gpr173 (ENSCCRG00000082903)	ENSCCRG00000014166	sema3gb (ENSCCRG00000014199)	wasb (ENSCCRG00000005377)	slc38a5b (ENSCCRG00000002161)	ccdc22 (ENSCCRG00000002130)	nt5dc2 (ENSCCRG00000050032)	tbc1d25 (ENSCCRG00000050086)	ENSCCRG00000050094	ppardb (ENSCCRG00000050977) #9	mkrn4 (ENSCCRG00000050163)	rpl10a (ENSCCRG00000057255) #11	ENSCCRG00000050980	ENSCCRG00000050235	ENSCCRG00000056041	ENSCCRG00000050911 #22	srpk1a (ENSCCRG00000050970)	lhfpl5b (ENSCCRG00000001353) #19	cpne5a (ENSCCRG00000010993) #37	dclre1b (ENSCCRG00000017101)	adora1b (ENSCCRG00000057125)	zgc:110353 (ENSCCRG00000027790)	mmp9 (ENSCCRG00000025804)	ENSCCRG00000077083	prok1 (ENSCCRG00000036795)	lamtor5 (ENSCCRG00000010391)	slc16a4 (ENSCCRG00000029373)	ENSCCRG00000073064	ENSCCRG00000056752	slc6a17 (ENSCCRG00000057073)	ENSCCRG00000069246
Golden-line barbel	MODERN SPECIES	145							nt5dc2 (ENSSGRG00000038037)	tbc1d25 (ENSSGRG00000038036)	ENSSGRG00000038035	ppardb (ENSSGRG00000038033) #9	mkrn4 (ENSSGRG00000038032)	fance (ENSSGRG00000038030) #10	ENSSGRG00000038027	zgc:195245 (ENSSGRG00000038024)	ELAPOR1 (ENSSGRG00000037713)	MAPK14 (ENSSGRG00000034544) #22	srpk1a (ENSSGRG00000034025)	lhfpl5b (ENSSGRG00000034009) #19	cpne5a (ENSSGRG00000034007) #37	adora1b (ENSSGRG00000034004)	zgc:110353 (ENSSGRG00000034003)	mmp9 (ENSSGRG00000033699)	ZNF335 (ENSSGRG00000033687)	prok1 (ENSSGRG00000033684)	RBM15 (ENSSGRG00000033678)	ENSSGRG00000033677	slc6a17 (ENSSGRG00000033675)	KCNC4 (ENSSGRG00000033674)	ENSSGRG00000033673	ahcyl1 (ENSSGRG00000032952)	nfyal (ENSSGRG00000032925)
Euteleosteomorpha	ANCESTRAL SPECIES	2	ENSGT00940000154409.eb.a	ENSGT01090000259987.a.a.b.f	ENSGT00940000155440.c.b	ENSGT01100000263685	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00530000063722.a	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Acanthomorphata	ANCESTRAL SPECIES	20	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Cod	MODERN SPECIES		dip2ba (ENSGMOG00000008260)	atf7a (ENSGMOG00000008255)	asb8 (ENSGMOG00000008251)	ENSGMOG00000008246	pfkma (ENSGMOG00000008238)	ENSGMOG00000032772	DEF6 (ENSGMOG00000008227) #8	ppardb (ENSGMOG00000008225) #9	fance (ENSGMOG00000008217) #10	rpl10a (ENSGMOG00000008210) #11	ENSGMOG00000008201	zgc:195245 (ENSGMOG00000008199)	ENSGMOG00000008193	ENSGMOG00000008190	ENSGMOG00000008183	ENSGMOG00000008181 #22	srpk1a (ENSGMOG00000026781)	lhfpl5b (ENSGMOG00000015512) #19	cpne5a (ENSGMOG00000008171) #37	dclre1b (ENSGMOG00000026961)	ENSGMOG00000028360	ENSGMOG00000015181	ENSGMOG00000022676	ENSGMOG00000025593	ENSGMOG00000028716	ENSGMOG00000005884	ENSGMOG00000005917	ENSGMOG00000025480	ENSGMOG00000005869	ENSGMOG00000027969	ENSGMOG00000006044
Euacanthomorphacea	ANCESTRAL SPECIES	2	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Percomorphaceae	ANCESTRAL SPECIES	7	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Tiger tail seahorse	MODERN SPECIES	514	ENSHCOG00000011210	CXXC1 (ENSHCOG00000011061)	ENSHCOG00000010920	cdk20 (ENSHCOG00000010897)	cacna1fb (ENSHCOG00000010548)	sypa (ENSHCOG00000004501)	ENSHCOG00000004479 ##19	ENSHCOG00000004463	uxt (ENSHCOG00000004409)	ENSHCOG00000004390	ENSHCOG00000004378	ENSHCOG00000004364	crygs3 (ENSHCOG00000000666)	smc5 (ENSHCOG00000004349)	ELAPOR1 (ENSHCOG00000004323)	MAPK14 (ENSHCOG00000004282) #22	srpk1a (ENSHCOG00000004263)	lhfpl5b (ENSHCOG00000004253) #19	cpne5a (ENSHCOG00000004236) #37	dclre1b (ENSHCOG00000004198)	mmp9 (ENSHCOG00000004140)	KCNC4 (ENSHCOG00000004112)	slc6a17 (ENSHCOG00000004101)	ENSHCOG00000004070	ENSHCOG00000004058	RBM15 (ENSHCOG00000004048)	slc16a4 (ENSHCOG00000004036)	lamtor5 (ENSHCOG00000004009)	prok1 (ENSHCOG00000003950)	ZNF335 (ENSHCOG00000003939)	ENSHCOG00000003912
Percomorphaceae_B	ANCESTRAL SPECIES	6	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Ovalentaria	ANCESTRAL SPECIES	6	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Atherinomorphae	ANCESTRAL SPECIES	3	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00530000063722.a	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.b #22
Cyprinodontoidei	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.b #22
NAME_4	ANCESTRAL SPECIES	7	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000178615	ENSGT00940000162196	ENSGT00940000155325.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
Mummichog	MODERN SPECIES	2276	PHF13 (ENSFHEG00000006661)	DNAJC11 (ENSFHEG00000006642)	ENSFHEG00000006567	HIPK1 (ENSFHEG00000006556)	ube2j2 (ENSFHEG00000006521)	acap3b (ENSFHEG00000006449)	PUSL1 (ENSFHEG00000006370)	ddx19b (ENSFHEG00000006352)	ENSFHEG00000006292	camk2n1 (ENSFHEG00000006277)	ENSFHEG00000006240	cdab (ENSFHEG00000006181)	DNAJC16 (ENSFHEG00000006147)	b3galt6 (ENSFHEG00000006133)	tmem167b (ENSFHEG00000006123)	MAPK14 (ENSFHEG00000006101) #22	srpk1b (ENSFHEG00000005977) #20	LHFPL5 (ENSFHEG00000005965) #19	KIF21B (ENSFHEG00000005940)	ENSFHEG00000005836 #37
Sheepshead minnow	MODERN SPECIES	1197													b3galt6 (ENSCVAG00000008248)	ENSCVAG00000008233	tmem167b (ENSCVAG00000008217)	MAPK14 (ENSCVAG00000008198) #22	srpk1b (ENSCVAG00000008128) #20	nuf2 (ENSCVAG00000008104)	LHFPL5 (ENSCVAG00000008089) #19	KIF21B (ENSCVAG00000008071)
Poeciliinae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.b #22
Poecilia	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.b #22
NAME_6	ANCESTRAL SPECIES																	ENSGT00940000155325.a.a.b #22
Amazon molly	MODERN SPECIES	374										camk2n1 (ENSPFOG00000018042)	ENSPFOG00000018028	ENSPFOG00000018000	cdab (ENSPFOG00000017993)	DNAJC16 (ENSPFOG00000017968)	b3galt6 (ENSPFOG00000020837)	MAPK14 (ENSPFOG00000017947) #22	srpk1b (ENSPFOG00000017893) #20	ENSPFOG00000017881 #19	KIF21B (ENSPFOG00000017794)	cpne5b (ENSPFOG00000017704) #37	ENSPFOG00000017684	ADORA1 (ENSPFOG00000017673)	ENSPFOG00000017668	ccdc3b (ENSPFOG00000017664)	CAMK1 (ENSPFOG00000017643)	gnl3 (ENSPFOG00000017601)	glt8d1 (ENSPFOG00000017573)	spcs1 (ENSPFOG00000017557)	nek4 (ENSPFOG00000017539)	sort1a (ENSPFOG00000017495)	psma5 (ENSPFOG00000017468)
Oryzias	ANCESTRAL SPECIES	4	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00550000074816.B	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Oryzias_b	ANCESTRAL SPECIES	2	ENSGT00950000182997.a.b.b.b.a.b	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Indian medaka	MODERN SPECIES	23	atf7a (ENSOMEG00000019624)	asb8 (ENSOMEG00000019634)	LARP4 (ENSOMEG00000019749)	pfkma (ENSOMEG00000019837)	ENSOMEG00000019910	def6a (ENSOMEG00000019977) #8	ppardb (ENSOMEG00000020023) #9	mkrn4 (ENSOMEG00000020049)	fance (ENSOMEG00000020064) #10	rpl10a (ENSOMEG00000020096) #11	ENSOMEG00000020133	zgc:195245 (ENSOMEG00000020147)	ENSOMEG00000020191	ENSOMEG00000020208	ELAPOR1 (ENSOMEG00000020232)	MAPK14 (ENSOMEG00000020288) #22	srpk1a (ENSOMEG00000020378)	lhfpl5b (ENSOMEG00000020410) #19	cpne5a (ENSOMEG00000020486) #37	dclre1b (ENSOMEG00000020517)	adora1b (ENSOMEG00000020524)	mmp9 (ENSOMEG00000020574)	ZNF335 (ENSOMEG00000020613)	prok1 (ENSOMEG00000020625)	lamtor5 (ENSOMEG00000020644)	slc16a4 (ENSOMEG00000020668)	RBM15 (ENSOMEG00000020683)	ALX3 (ENSOMEG00000020695)	slc6a17 (ENSOMEG00000020740)	KCNC4 (ENSOMEG00000020763)	hspa1b (ENSOMEG00000020771)
Javanese ricefish	MODERN SPECIES	21	atf7a (ENSOJAG00000017440)	asb8 (ENSOJAG00000017418)	LARP4 (ENSOJAG00000017413)	pfkma (ENSOJAG00000017033)	ENSOJAG00000016980	def6a (ENSOJAG00000016963) #8	ppardb (ENSOJAG00000016935) #9	mkrn4 (ENSOJAG00000016924)	fance (ENSOJAG00000016912) #10	rpl10a (ENSOJAG00000016849) #11	ENSOJAG00000016841	ENSOJAG00000016792	ENSOJAG00000016194	zgc:195245 (ENSOJAG00000016139)	ELAPOR1 (ENSOJAG00000015439)	MAPK14 (ENSOJAG00000015168) #22	srpk1a (ENSOJAG00000013638)	lhfpl5b (ENSOJAG00000013510) #19	cpne5a (ENSOJAG00000012585) #37	dclre1b (ENSOJAG00000012471)	adora1b (ENSOJAG00000012463)	mmp9 (ENSOJAG00000010824)	ZNF335 (ENSOJAG00000010652)	prok1 (ENSOJAG00000010634)	lamtor5 (ENSOJAG00000010604)	slc16a4 (ENSOJAG00000010591)	RBM15 (ENSOJAG00000010585)	ALX3 (ENSOJAG00000010579)	slc6a17 (ENSOJAG00000010532)	ENSOJAG00000010521	ahcyl1 (ENSOJAG00000010016)
Oryzias_a	ANCESTRAL SPECIES		ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT01000000217912	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Japanese Medaka HdrR	MODERN SPECIES	21	atf7a (ENSORLG00000006799)	asb8 (ENSORLG00000024296)	ENSORLG00000006758	pfkma (ENSORLG00000006734)	ENSORLG00000006663	def6a (ENSORLG00000006652) #8	ppardb (ENSORLG00000006636) #9	mkrn4 (ENSORLG00000006615)	fance (ENSORLG00000006609) #10	rpl10a (ENSORLG00000006600) #11	ENSORLG00000006585	zgc:195245 (ENSORLG00000006578)	smc5 (ENSORLG00000006574)	ENSORLG00000025906	ELAPOR1 (ENSORLG00000006540)	MAPK14 (ENSORLG00000006477) #22	srpk1a (ENSORLG00000006445)	lhfpl5b (ENSORLG00000006380) #19	ENSORLG00000023802	cpne5a (ENSORLG00000006371) #37	dclre1b (ENSORLG00000006355)	adora1b (ENSORLG00000006349)	mmp9 (ENSORLG00000006340)	ZNF335 (ENSORLG00000006291)	lamtor5 (ENSORLG00000006257)	prok1 (ENSORLG00000023050)	slc16a4 (ENSORLG00000006243)	RBM15 (ENSORLG00000006197)	ALX3 (ENSORLG00000006191)	slc6a17 (ENSORLG00000006181)	ENSORLG00000006154
Ovalentaria_B	ANCESTRAL SPECIES	2	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Cichlidae	ANCESTRAL SPECIES		ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Pseudocrenilabrinae	ANCESTRAL SPECIES	5	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	17	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Haplochromini	ANCESTRAL SPECIES	18	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415.f	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Haplochromini_A	ANCESTRAL SPECIES	22	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415.f	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Haplochromini_B	ANCESTRAL SPECIES	19	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415.f	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Eastern happy	MODERN SPECIES	12	asb8 (ENSACLG00000002619)	LARP4 (ENSACLG00000002575)	pfkma (ENSACLG00000002537)	ENSACLG00000002524	def6a (ENSACLG00000002441) #8	ppardb (ENSACLG00000002389) #9	mkrn4 (ENSACLG00000002368)	fance (ENSACLG00000002359) #10	rpl10a (ENSACLG00000002350) #11	ENSACLG00000002342	ENSACLG00000002327	zgc:195245 (ENSACLG00000002310)	ENSACLG00000002279	ENSACLG00000002254	ELAPOR1 (ENSACLG00000002236)	MAPK14 (ENSACLG00000002174) #22	srpk1a (ENSACLG00000002140)	lhfpl5b (ENSACLG00000002097) #19	cpne5a (ENSACLG00000001979) #37	dclre1b (ENSACLG00000001963)	adora1b (ENSACLG00000001934)	mmp9 (ENSACLG00000001873)	ZNF335 (ENSACLG00000001847)	ENSACLG00000001801	prok1 (ENSACLG00000001795)	lamtor5 (ENSACLG00000001783)	slc16a4 (ENSACLG00000001768)	RBM15 (ENSACLG00000001673)	ALX3 (ENSACLG00000001667)	slc6a17 (ENSACLG00000001594)	KCNC4 (ENSACLG00000001578)
Zebra mbuna	MODERN SPECIES	1103	atf7a (ENSMZEG00005001761)	asb8 (ENSMZEG00005001796)	LARP4 (ENSMZEG00005001813)	pfkma (ENSMZEG00005001836)	ENSMZEG00005001890	def6a (ENSMZEG00005001907) #8	ppardb (ENSMZEG00005001947) #9	mkrn4 (ENSMZEG00005001958)	fance (ENSMZEG00005001981) #10	rpl10a (ENSMZEG00005002010) #11	ENSMZEG00005005148	zgc:195245 (ENSMZEG00005005159)	smc5 (ENSMZEG00005005223)	ENSMZEG00005006271	ELAPOR1 (ENSMZEG00005006309)	ENSMZEG00005006370 #22	srpk1a (ENSMZEG00005006383)	lhfpl5b (ENSMZEG00005006410) #19	cpne5a (ENSMZEG00005006419) #37	dclre1b (ENSMZEG00005006454)	adora1b (ENSMZEG00005006459)	mmp9 (ENSMZEG00005006471)	ZNF335 (ENSMZEG00005006500)	ENSMZEG00005006526	prok1 (ENSMZEG00005006553)	lamtor5 (ENSMZEG00005006567)	slc16a4 (ENSMZEG00005006575)	RBM15 (ENSMZEG00005006595)	ALX3 (ENSMZEG00005006605)	slc6a17 (ENSMZEG00005006618)	KCNC4 (ENSMZEG00005006634)
P. nyererei	MODERN SPECIES	342	dip2ba (ENSPNYG00000022164)	atf7a (ENSPNYG00000022232)	asb8 (ENSPNYG00000022250)	LARP4 (ENSPNYG00000022265)	pfkma (ENSPNYG00000022296)	ENSPNYG00000022325	def6a (ENSPNYG00000022339) #8	ppardb (ENSPNYG00000022354) #9	mkrn4 (ENSPNYG00000022367)	fance (ENSPNYG00000022380) #10	rpl10a (ENSPNYG00000022401) #11	ENSPNYG00000022411	zgc:195245 (ENSPNYG00000022421)	ENSPNYG00000022436	ELAPOR1 (ENSPNYG00000022449)	ENSPNYG00000022470 #22	srpk1a (ENSPNYG00000022482)	lhfpl5b (ENSPNYG00000022521) #19	cpne5a (ENSPNYG00000022524) #37	dclre1b (ENSPNYG00000022539)	adora1b (ENSPNYG00000022543)	ENSPNYG00000022548	ENSPNYG00000000687	ZNF335 (ENSPNYG00000000694)
Burton s mouthbrooder	MODERN SPECIES	277	asb8 (ENSHBUG00000023091)	LARP4 (ENSHBUG00000023074)	pfkma (ENSHBUG00000022945)	ENSHBUG00000022850	def6a (ENSHBUG00000000701) #8	ppardb (ENSHBUG00000022834) #9	mkrn4 (ENSHBUG00000022825)	fance (ENSHBUG00000022812) #10	rpl10a (ENSHBUG00000022799) #11	ENSHBUG00000022789	ENSHBUG00000022777	zgc:195245 (ENSHBUG00000022767)	ENSHBUG00000022745	ENSHBUG00000022727	ELAPOR1 (ENSHBUG00000022700)	MAPK14 (ENSHBUG00000022694) #22	srpk1a (ENSHBUG00000022676)	lhfpl5b (ENSHBUG00000022649) #19	cpne5a (ENSHBUG00000000695) #37	dclre1b (ENSHBUG00000000905)	adora1b (ENSHBUG00000022466)	mmp9 (ENSHBUG00000022457)	ZNF335 (ENSHBUG00000022427)	ENSHBUG00000000682	prok1 (ENSHBUG00000022365)	prok1 (ENSHBUG00000022357)	lamtor5 (ENSHBUG00000022344)	slc16a4 (ENSHBUG00000022243)	RBM15 (ENSHBUG00000022227)	ALX3 (ENSHBUG00000022212)	slc6a17 (ENSHBUG00000022205)
Lyretail cichlid	MODERN SPECIES	298	asb8 (ENSNBRG00000011324)	LARP4 (ENSNBRG00000011292)	ENSNBRG00000011260	ENSNBRG00000011230	ENSNBRG00000011193	def6a (ENSNBRG00000011063) #8	ppardb (ENSNBRG00000011001) #9	mkrn4 (ENSNBRG00000010946)	ENSNBRG00000010938	ENSNBRG00000010916 #10	rpl10a (ENSNBRG00000010890) #11	zgc:195245 (ENSNBRG00000010878)	ENSNBRG00000010855	ENSNBRG00000010547	ELAPOR1 (ENSNBRG00000010406)	MAPK14 (ENSNBRG00000009498) #22	srpk1a (ENSNBRG00000009235)	lhfpl5b (ENSNBRG00000009219) #19	cpne5a (ENSNBRG00000009118) #37	dclre1b (ENSNBRG00000009095)	adora1b (ENSNBRG00000009081)	ENSNBRG00000009071	ENSNBRG00000009059	ZNF335 (ENSNBRG00000008985)	ENSNBRG00000008944	prok1 (ENSNBRG00000008920)	lamtor5 (ENSNBRG00000008898)	slc16a4 (ENSNBRG00000008880)	RBM15 (ENSNBRG00000008870)	slc6a17 (ENSNBRG00000008836)	KCNC4 (ENSNBRG00000008828)
Nile tilapia	MODERN SPECIES	12	asb8 (ENSONIG00000034107)	LARP4 (ENSONIG00000011895)	pfkma (ENSONIG00000011877)	ENSONIG00000023947	def6a (ENSONIG00000011876) #8	ppard (ENSONIG00000011871) #9	mkrn4 (ENSONIG00000011870)	fance (ENSONIG00000011869) #10	rpl10a (ENSONIG00000011864) #11	ENSONIG00000011863	ENSONIG00000011861	zgc:195245 (ENSONIG00000011860)	ENSONIG00000011853	lg20h1orf194 (ENSONIG00000036001)	ELAPOR1 (ENSONIG00000011847)	MAPK14 (ENSONIG00000011834) #22	srpk1a (ENSONIG00000011833)	lhfpl5b (ENSONIG00000034910) #19	CPNE5 (ENSONIG00000011820) #37	dclre1b (ENSONIG00000029854)	adora1b (ENSONIG00000028739)	mmp9 (ENSONIG00000011812)	ZNF335 (ENSONIG00000011809)	ENSONIG00000033928	ENSONIG00000002541	prok1 (ENSONIG00000039301)	lamtor5 (ENSONIG00000002539)	slc16a4 (ENSONIG00000002533)	RBM15 (ENSONIG00000002532)	ALX3 (ENSONIG00000002531)	slc6a17 (ENSONIG00000002523)
Pomacentridae	ANCESTRAL SPECIES	2	ENSGT00940000165418	ENSGT00950000182997.a.b.b.b.a.b	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000159662.d	ENSGT00940000165209	ENSGT00940000160669
Pomacentridae_A	ANCESTRAL SPECIES	12	ENSGT00940000165418	ENSGT00950000182997.a.b.b.b.a.b	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a.e	ENSGT00940000158860
Amphiprion	ANCESTRAL SPECIES	29	ENSGT00950000182997.a.b.b.b.a.b	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00530000063722.a	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000165209	ENSGT00940000159662.d	ENSGT00940000156542.a.e
Orange clownfish	MODERN SPECIES	22	dip2ba (ENSAPEG00000018911)	atf7a (ENSAPEG00000019006)	asb8 (ENSAPEG00000019041)	ENSAPEG00000019058	pfkma (ENSAPEG00000019092)	ENSAPEG00000019205	def6a (ENSAPEG00000019233) #8	ppardb (ENSAPEG00000019291) #9	mkrn4 (ENSAPEG00000019319)	fance (ENSAPEG00000019332) #10	rpl10a (ENSAPEG00000019421) #11	ENSAPEG00000019450	INAVA (ENSAPEG00000019462)	zgc:195245 (ENSAPEG00000019478)	ELAPOR1 (ENSAPEG00000019511)	MAPK14 (ENSAPEG00000019544) #22	srpk1a (ENSAPEG00000019620)	cpne5a (ENSAPEG00000019725) #37	dclre1b (ENSAPEG00000019877)	adora1b (ENSAPEG00000019884)	mmp9 (ENSAPEG00000019893)	ZNF335 (ENSAPEG00000019914)	ENSAPEG00000020000	prok1 (ENSAPEG00000020014)	lamtor5 (ENSAPEG00000020041)	slc16a4 (ENSAPEG00000020058)	RBM15 (ENSAPEG00000020077)	ENSAPEG00000020149	ENSAPEG00000020159	slc6a17 (ENSAPEG00000020178)	KCNC4 (ENSAPEG00000020218)
Clown anemonefish	MODERN SPECIES	702	ENSAOCG00000013191	dip2ba (ENSAOCG00000013302)	atf7a (ENSAOCG00000013353)	asb8 (ENSAOCG00000013378)	ENSAOCG00000002408	pfkma (ENSAOCG00000013524)	ENSAOCG00000013555	def6a (ENSAOCG00000013606) #8	ppardb (ENSAOCG00000000854) #9	mkrn4 (ENSAOCG00000013661)	fance (ENSAOCG00000013678) #10	rpl10a (ENSAOCG00000013690) #11	INAVA (ENSAOCG00000013728)	zgc:195245 (ENSAOCG00000013739)	ELAPOR1 (ENSAOCG00000013781)	MAPK14 (ENSAOCG00000013845) #22	srpk1a (ENSAOCG00000013884)
Spiny chromis	MODERN SPECIES	537		atf7a (ENSAPOG00000007234)	asb8 (ENSAPOG00000007180)	LARP4 (ENSAPOG00000007142)	pfkma (ENSAPOG00000007052)	ENSAPOG00000006389	def6a (ENSAPOG00000006367) #8	ppardb (ENSAPOG00000006313) #9	mkrn4 (ENSAPOG00000006267)	fance (ENSAPOG00000006220) #10	rpl10a (ENSAPOG00000006206) #11	ENSAPOG00000006185	INAVA (ENSAPOG00000006175)	zgc:195245 (ENSAPOG00000006163)	ELAPOR1 (ENSAPOG00000006134)	MAPK14 (ENSAPOG00000006083) #22	srpk1a (ENSAPOG00000006062)	lhfpl5b (ENSAPOG00000006023) #19	cpne5a (ENSAPOG00000005989) #37	dclre1b (ENSAPOG00000005892)
Percomorphaceae_C	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Percomorphaceae_D	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Anabantaria	ANCESTRAL SPECIES	3	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Anabantoidei	ANCESTRAL SPECIES	2	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Siamese fighting fish	MODERN SPECIES	18	ENSBSLG00000000877	dip2ba (ENSBSLG00000001927)	atf7a (ENSBSLG00000002111)	asb8 (ENSBSLG00000002113)	LARP4 (ENSBSLG00000002115)	ENSBSLG00000002127	def6a (ENSBSLG00000002222) #8	ppardb (ENSBSLG00000002281) #9	fance (ENSBSLG00000002342) #10	rpl10a (ENSBSLG00000002383) #11	ENSBSLG00000002434	zgc:195245 (ENSBSLG00000002478)	smc5 (ENSBSLG00000002683)	ENSBSLG00000003122	ELAPOR1 (ENSBSLG00000003125)	MAPK14 (ENSBSLG00000003167) #22	srpk1a (ENSBSLG00000003258)	lhfpl5b (ENSBSLG00000003571) #19	cpne5a (ENSBSLG00000003796) #37	dclre1b (ENSBSLG00000004014)	adora1b (ENSBSLG00000004032)	mmp9 (ENSBSLG00000004091)	ZNF335 (ENSBSLG00000004324)	ENSBSLG00000004330	ENSBSLG00000004337	prok1 (ENSBSLG00000004372)	lamtor5 (ENSBSLG00000004377)	slc16a4 (ENSBSLG00000004752)	RBM15 (ENSBSLG00000004783)	ENSBSLG00000004799	ENSBSLG00000004818
Zig-zag eel	MODERN SPECIES	21	atf7a (ENSMAMG00000011234)	asb8 (ENSMAMG00000027831)	ENSMAMG00000011206	pfkma (ENSMAMG00000011141)	ENSMAMG00000011104	DEF6 (ENSMAMG00000011078) #8	ppardb (ENSMAMG00000011065) #9	mkrn4 (ENSMAMG00000011051)	fance (ENSMAMG00000011012) #10	rpl10a (ENSMAMG00000011005) #11	ENSMAMG00000010982	zgc:195245 (ENSMAMG00000010967)	ENSMAMG00000010953	ENSMAMG00000010939	ENSMAMG00000010913	ENSMAMG00000010909 #22	srpk1a (ENSMAMG00000010877)	lhfpl5b (ENSMAMG00000010867) #19	cpne5a (ENSMAMG00000010842) #37	dclre1b (ENSMAMG00000010837)	ENSMAMG00000010827	mmp9 (ENSMAMG00000010804)	ENSMAMG00000010775	ENSMAMG00000010768	prok1 (ENSMAMG00000010755)	lamtor5 (ENSMAMG00000010745)	slc16a4 (ENSMAMG00000010736)	RBM15 (ENSMAMG00000010732)	ENSMAMG00000010714	slc6a17 (ENSMAMG00000010680)	ENSMAMG00000010675
Carangaria	ANCESTRAL SPECIES	2	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Carangaria_A	ANCESTRAL SPECIES	1	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Seriola	ANCESTRAL SPECIES	8	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Yellowtail amberjack	MODERN SPECIES	3155	asb8 (ENSSLDG00000004994)	ENSSLDG00000004942	pfkma (ENSSLDG00000004828)	ENSSLDG00000004791	def6a (ENSSLDG00000004712) #8	ppardb (ENSSLDG00000004607) #9	mkrn4 (ENSSLDG00000004587)	fance (ENSSLDG00000004550) #10	rpl10a (ENSSLDG00000004242) #11	ENSSLDG00000004211	ENSSLDG00000004179	zgc:195245 (ENSSLDG00000004088)	ENSSLDG00000004041	ENSSLDG00000004012	ELAPOR1 (ENSSLDG00000003995)	ENSSLDG00000003466 #22	srpk1a (ENSSLDG00000003366)	lhfpl5b (ENSSLDG00000003336) #19	ENSSLDG00000003312	cpne5a (ENSSLDG00000003151) #37	dclre1b (ENSSLDG00000003115)	adora1b (ENSSLDG00000003092)	mmp9 (ENSSLDG00000003000)	ENSSLDG00000002973	ZNF335 (ENSSLDG00000002903)	ENSSLDG00000002880	prok1 (ENSSLDG00000002843)	lamtor5 (ENSSLDG00000002733)	slc16a4 (ENSSLDG00000002714)	RBM15 (ENSSLDG00000002691)	ALX3 (ENSSLDG00000002667)
Pleuronectoidei	ANCESTRAL SPECIES	14	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00990000203931	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Tongue sole	MODERN SPECIES	1	LARP4 (ENSCSEG00000001963)	pfkma (ENSCSEG00000001938)	ENSCSEG00000001930	def6a (ENSCSEG00000001910) #8	ppardb (ENSCSEG00000001902) #9	mkrn4 (ENSCSEG00000001896)	fance (ENSCSEG00000001892) #10	rpl10a (ENSCSEG00000001886) #11	ENSCSEG00000001882	ENSCSEG00000001873	zgc:195245 (ENSCSEG00000001863)	ENSCSEG00000001847	ENSCSEG00000001840	smc5 (ENSCSEG00000001789)	ELAPOR1 (ENSCSEG00000001777)	MAPK14 (ENSCSEG00000001770) #22	srpk1a (ENSCSEG00000001752)	lhfpl5b (ENSCSEG00000001747) #19	cpne5a (ENSCSEG00000001725) #37	dclre1b (ENSCSEG00000001718)	adora1b (ENSCSEG00000001717)	mmp9 (ENSCSEG00000001640)	ZNF335 (ENSCSEG00000001591)	prok1 (ENSCSEG00000001581)	lamtor5 (ENSCSEG00000001567)	smc1al (ENSCSEG00000001552)	ribc1 (ENSCSEG00000001548)	l1cama (ENSCSEG00000001510)	HUWE1 (ENSCSEG00000001466)	phf8 (ENSCSEG00000001447)	ENSCSEG00000001437
Turbot	MODERN SPECIES	2	atf7a (ENSSMAG00000019511)	asb8 (ENSSMAG00000019500)	ENSSMAG00000019473	pfkma (ENSSMAG00000019425)	ENSSMAG00000019407	DEF6 (ENSSMAG00000019391) #8	ppardb (ENSSMAG00000019375) #9	mkrn4 (ENSSMAG00000019369)	fance (ENSSMAG00000019359) #10	rpl10a (ENSSMAG00000019351) #11	ENSSMAG00000019340	zgc:195245 (ENSSMAG00000019329)	ENSSMAG00000019316	si:ch211-163l21.7 (ENSSMAG00000019310)	ENSSMAG00000019290	ENSSMAG00000019276 #22	srpk1a (ENSSMAG00000019272)	lhfpl5b (ENSSMAG00000019265) #19	cpne5a (ENSSMAG00000019197) #37	dclre1b (ENSSMAG00000036753)	ENSSMAG00000019185	mmp9 (ENSSMAG00000019171)	ENSSMAG00000019162	ENSSMAG00000019152	ENSSMAG00000025807	prok1 (ENSSMAG00000019143)	lamtor5 (ENSSMAG00000019121)	slc16a4 (ENSSMAG00000019117)	RBM15 (ENSSMAG00000019106)	ENSSMAG00000019092	slc6a17 (ENSSMAG00000019078)
Eupercaria	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Tetraodontidae	ANCESTRAL SPECIES	2	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b.m	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Fugu	MODERN SPECIES	15	SCN8A (ENSTRUG00000015715)	dip2ba (ENSTRUG00000015870)	atf7a (ENSTRUG00000015923)	ENSTRUG00000015939	ENSTRUG00000021701	def6a (ENSTRUG00000016125) #8	ppardb (ENSTRUG00000016146) #9	mkrn4 (ENSTRUG00000025139)	fance (ENSTRUG00000016161) #10	rpl10a (ENSTRUG00000016168) #11	ENSTRUG00000016183	zgc:195245 (ENSTRUG00000016189)	smc5 (ENSTRUG00000016193)	ENSTRUG00000021751	ELAPOR1 (ENSTRUG00000032645)	ENSTRUG00000016218 #22	srpk1a (ENSTRUG00000016288)	lhfpl5b (ENSTRUG00000016319) #19	cpne5a (ENSTRUG00000016323) #37	dclre1b (ENSTRUG00000025152)	adora1b (ENSTRUG00000016343)	mmp9 (ENSTRUG00000000827)	ZNF335 (ENSTRUG00000001322)	prok1 (ENSTRUG00000001689)	lamtor5 (ENSTRUG00000023554)	slc16a4 (ENSTRUG00000001770)	RBM15 (ENSTRUG00000002921)	ALX3 (ENSTRUG00000003032)	slc6a17 (ENSTRUG00000003091)	KCNC4 (ENSTRUG00000003770)	hspa1b (ENSTRUG00000003792)
Tetraodon	MODERN SPECIES	24	dip2ba (ENSTNIG00000015106)	atf7a (ENSTNIG00000015107)	asb8 (ENSTNIG00000015108)	ENSTNIG00000015109	pfkma (ENSTNIG00000015110)	def6a (ENSTNIG00000015111) #8	ppardb (ENSTNIG00000015112) #9	ENSTNIG00000001133	fance (ENSTNIG00000015113) #10	rpl10a (ENSTNIG00000001264) #11	ENSTNIG00000001982	ENSTNIG00000015114	zgc:195245 (ENSTNIG00000015115)	smc5 (ENSTNIG00000015116)	ELAPOR1 (ENSTNIG00000015117)	ENSTNIG00000015118 #22	srpk1a (ENSTNIG00000015119)	lhfpl5b (ENSTNIG00000015120) #19	cpne5a (ENSTNIG00000015121) #37	dclre1b (ENSTNIG00000015122)	adora1b (ENSTNIG00000015123)	mmp9 (ENSTNIG00000015124)	ZNF335 (ENSTNIG00000015125)	prok1 (ENSTNIG00000015126)	lamtor5 (ENSTNIG00000015127)	slc16a4 (ENSTNIG00000015128)	RBM15 (ENSTNIG00000015129)	ALX3 (ENSTNIG00000015130)	slc6a17 (ENSTNIG00000015131)	KCNC4 (ENSTNIG00000015132)	ahcyl1 (ENSTNIG00000015134)
Eupecaria_A	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Eupecaria_B	ANCESTRAL SPECIES	5	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Eupecaria_C	ANCESTRAL SPECIES	5	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	15	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Large yellow croaker	MODERN SPECIES	487	atf7a (ENSLCRG00005017919)	asb8 (ENSLCRG00005017925)	LARP4 (ENSLCRG00005017927)	pfkma (ENSLCRG00005017939)	ENSLCRG00005018186	def6a (ENSLCRG00005018192) #8	ppardb (ENSLCRG00005018194) #9	mkrn4 (ENSLCRG00005018216)	fance (ENSLCRG00005018217) #10	rpl10a (ENSLCRG00005018219) #11	ENSLCRG00005018222	zgc:195245 (ENSLCRG00005018223)	smc5 (ENSLCRG00005018231)	ENSLCRG00005018866	ELAPOR1 (ENSLCRG00005018893)	MAPK14 (ENSLCRG00005019366) #22	srpk1a (ENSLCRG00005019847)	lhfpl5b (ENSLCRG00005019955) #19	cpne5a (ENSLCRG00005019956) #37	dclre1b (ENSLCRG00005019974)	adora1b (ENSLCRG00005019975)	mmp9 (ENSLCRG00005019979)	ZNF335 (ENSLCRG00005020055)	ENSLCRG00005020057	prok1 (ENSLCRG00005020061)	lamtor5 (ENSLCRG00005020062)	slc16a4 (ENSLCRG00005020068)	RBM15 (ENSLCRG00005020070)	ALX3 (ENSLCRG00005020071)	slc6a17 (ENSLCRG00005020074)	KCNC4 (ENSLCRG00005020078)
European seabass	MODERN SPECIES	14	atf7a (ENSDLAG00005004486)	asb8 (ENSDLAG00005031286)	ENSDLAG00005004625	pfkma (ENSDLAG00005005095)	ENSDLAG00005013823	DEF6 (ENSDLAG00005013886) #8	ppardb (ENSDLAG00005013901) #9	mkrn4 (ENSDLAG00005013970)	fance (ENSDLAG00005013986) #10	rpl10a (ENSDLAG00005014033) #11	ENSDLAG00005014062	zgc:195245 (ENSDLAG00005031211)	ENSDLAG00005014120	si:ch211-163l21.7 (ENSDLAG00005015699)	ENSDLAG00005015713	ENSDLAG00005015989 #22	srpk1a (ENSDLAG00005016545)	lhfpl5b (ENSDLAG00005026336) #19	cpne5a (ENSDLAG00005018098) #37	dclre1b (ENSDLAG00005018673)	mmp9 (ENSDLAG00005018682)	ENSDLAG00005018827	ENSDLAG00005018846	prok1 (ENSDLAG00005018880)	lamtor5 (ENSDLAG00005033114)	slc16a4 (ENSDLAG00005018916)	RBM15 (ENSDLAG00005034411)	ENSDLAG00005030194	slc6a17 (ENSDLAG00005018976)	ENSDLAG00005019002	hspa1b (ENSDLAG00005003022)
Gilthead seabream	MODERN SPECIES	21	asb8 (ENSSAUG00010025148)	LARP4 (ENSSAUG00010025150)	pfkma (ENSSAUG00010025172)	ENSSAUG00010025267	def6a (ENSSAUG00010025274) #8	ppardb (ENSSAUG00010025277) #9	mkrn4 (ENSSAUG00010025281)	fance (ENSSAUG00010025283) #10	rpl10a (ENSSAUG00010025284) #11	ENSSAUG00010025285	ENSSAUG00010025286	zgc:195245 (ENSSAUG00010025287)	ENSSAUG00010025297	ENSSAUG00010025645	ELAPOR1 (ENSSAUG00010025655)	MAPK14 (ENSSAUG00010025761) #22	srpk1a (ENSSAUG00010026300)	lhfpl5b (ENSSAUG00010026514) #19	cpne5a (ENSSAUG00010026515) #37	dclre1b (ENSSAUG00010026517)	adora1b (ENSSAUG00010026518)	mmp9 (ENSSAUG00010026521)	ZNF335 (ENSSAUG00010026578)	ENSSAUG00010026579	prok1 (ENSSAUG00010026581)	lamtor5 (ENSSAUG00010026582)	slc16a4 (ENSSAUG00010026583)	RBM15 (ENSSAUG00010026584)	ALX3 (ENSSAUG00010026585)	slc6a17 (ENSSAUG00010026586)	KCNC4 (ENSSAUG00010026588)
Perciformes	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Cottioidei	ANCESTRAL SPECIES	2	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Lumpfish	MODERN SPECIES	22	atf7a (ENSCLMG00005015504)	asb8 (ENSCLMG00005015503)	LARP4 (ENSCLMG00005015498)	pfkma (ENSCLMG00005015492)	ENSCLMG00005015491	def6a (ENSCLMG00005015490) #8	ppardb (ENSCLMG00005015442) #9	mkrn4 (ENSCLMG00005015437)	fance (ENSCLMG00005015432) #10	rpl10a (ENSCLMG00005015428) #11	ENSCLMG00005015425	zgc:195245 (ENSCLMG00005015424)	smc5 (ENSCLMG00005011718)	ENSCLMG00005011704	ELAPOR1 (ENSCLMG00005011703)	MAPK14 (ENSCLMG00005011533) #22	srpk1a (ENSCLMG00005011520)	lhfpl5b (ENSCLMG00005011519) #19	ENSCLMG00005011517 #37	dclre1b (ENSCLMG00005011515)	adora1b (ENSCLMG00005011509)	mmp9 (ENSCLMG00005011431)	ZNF335 (ENSCLMG00005011427)	ENSCLMG00005011422	prok1 (ENSCLMG00005011421)	lamtor5 (ENSCLMG00005011420)	slc16a4 (ENSCLMG00005011418)	RBM15 (ENSCLMG00005011415)	ALX3 (ENSCLMG00005011412)	slc6a17 (ENSCLMG00005011401)	KCNC4 (ENSCLMG00005011400)
Stickleback	MODERN SPECIES	11	dip2ba (ENSGACG00000008427)	atf7a (ENSGACG00000008417)	asb8 (ENSGACG00000008406)	LARP4 (ENSGACG00000008381)	pfkma (ENSGACG00000008357)	ENSGACG00000008347	def6a (ENSGACG00000008311) #8	ppardb (ENSGACG00000008288) #9	mkrn4 (ENSGACG00000008285)	ENSGACG00000008283	fance (ENSGACG00000008262) #10	ENSGACG00000008244	zgc:195245 (ENSGACG00000008236)	smc5 (ENSGACG00000008208)	ELAPOR1 (ENSGACG00000008195)	ENSGACG00000008157 #22	srpk1a (ENSGACG00000008145)	lhfpl5b (ENSGACG00000008138) #19	cpne5a (ENSGACG00000008082) #37	dclre1b (ENSGACG00000008079)	adora1b (ENSGACG00000008072)	mmp9 (ENSGACG00000008035)	ZNF335 (ENSGACG00000008023)	ENSGACG00000007950	prok1 (ENSGACG00000007944)	slc16a4 (ENSGACG00000007935)	RBM15 (ENSGACG00000007932)	slc6a17 (ENSGACG00000007913)	KCNC4 (ENSGACG00000007907)	hspa1b (ENSGACG00000007903)	ahcyl1 (ENSGACG00000007894)
Perciformes_a	ANCESTRAL SPECIES	2	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.a.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000162710.c.a	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860
Channel bull blenny	MODERN SPECIES	21	atf7a (ENSCGOG00000022817)	asb8 (ENSCGOG00000022819)	LARP4 (ENSCGOG00000022825)	pfkma (ENSCGOG00000022894)	ENSCGOG00000023517	def6a (ENSCGOG00000023522) #8	ppardb (ENSCGOG00000023560) #9	mkrn4 (ENSCGOG00000023599)	fance (ENSCGOG00000023608) #10	rpl10a (ENSCGOG00000023617) #11	ENSCGOG00000023625	zgc:195245 (ENSCGOG00000023626)	smc5 (ENSCGOG00000023640)	ENSCGOG00000023854	ELAPOR1 (ENSCGOG00000023858)	MAPK14 (ENSCGOG00000023949) #22	srpk1a (ENSCGOG00000024320)	lhfpl5b (ENSCGOG00000024418) #19	cpne5a (ENSCGOG00000024422) #37	dclre1b (ENSCGOG00000024434)	adora1b (ENSCGOG00000024435)	mmp9 (ENSCGOG00000024463)	ZNF335 (ENSCGOG00000024536)	ENSCGOG00000003879	lamtor5 (ENSCGOG00000004259)	slc16a4 (ENSCGOG00000004288)	RBM15 (ENSCGOG00000004300)	ALX3 (ENSCGOG00000004304)	slc6a17 (ENSCGOG00000004320)	zgc:113274 (ENSCGOG00000004599)	KCNC4 (ENSCGOG00000004602)
Pike perch	MODERN SPECIES	7													smc5 (ENSSLUG00000007823)	si:ch211-163l21.7 (ENSSLUG00000007795)	ELAPOR1 (ENSSLUG00000007740)	MAPK14 (ENSSLUG00000007361) #22	srpk1a (ENSSLUG00000007198)	lhfpl5b (ENSSLUG00000007178) #19	cpne5a (ENSSLUG00000007102) #37	dclre1b (ENSSLUG00000007080)	adora1b (ENSSLUG00000007074)	mmp9 (ENSSLUG00000006747)	ZNF335 (ENSSLUG00000006672)	ENSSLUG00000006593	prok1 (ENSSLUG00000006578)	lamtor5 (ENSSLUG00000006572)	slc16a4 (ENSSLUG00000006565)	RBM15 (ENSSLUG00000006561)	ALX3 (ENSSLUG00000006553)	slc6a17 (ENSSLUG00000006544)	KCNC4 (ENSSLUG00000006533)
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Osteoglossocephalai	ANCESTRAL SPECIES	262			ENSGT00940000158289.a.b	ENSGT00390000000819.b	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37
Osteoglossiformes	ANCESTRAL SPECIES	160	ENSGT00950000183117.a.b.a.a	ENSGT00940000153544.a.i.b #32	ENSGT00390000007975.b #31	ENSGT00940000161251	ENSGT00940000158289.a.b	ENSGT00390000000819.b	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.c #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000162196	ENSGT00940000155325.a.a.a.a.b #22	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b
P. kingsleyae	MODERN SPECIES	541														ELAPOR1 (ENSPKIG00000008020)	si:ch211-163l21.7 (ENSPKIG00000008059)	ENSPKIG00000008112 #22	SRPK1 (ENSPKIG00000008187) #20	lhfpl5b (ENSPKIG00000008213) #19	CLPS (ENSPKIG00000008229) #18	cpne5a (ENSPKIG00000008253) #37	dclre1b (ENSPKIG00000008279)
Clupeocephala	ANCESTRAL SPECIES	283												ENSGT00940000169818	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00950000183160.C	ENSGT00940000156199.a.a
Otomorpha	ANCESTRAL SPECIES	347												ENSGT00940000169818	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00950000183160.C	ENSGT00940000156199.a.a
Clupeiformes	ANCESTRAL SPECIES	151			ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01090000260288	ENSGT00940000154417.d	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000169818	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000166975.j	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT00950000183124.A
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	3	slc2a10 (ENSDCDG00000033080)	ENSDCDG00000033018	ube2v1 (ENSDCDG00000033003)	SRC (ENSDCDG00000031161)	ENSDCDG00000031119	ENSDCDG00000031110	ENSDCDG00000031095	ENSDCDG00000031083	igfn1.1 (ENSDCDG00000031075)	ENSDCDG00000031071	ENSDCDG00000031058	ENSDCDG00000031054	igfn1.1 (ENSDCDG00000031051)	ENSDCDG00000031044	tmem167b (ENSDCDG00000031042)	mapk14b (ENSDCDG00000030848) #22	ENSDCDG00000030427	LHFPL5 (ENSDCDG00000030397) #19	ENSDCDG00000030395	ENSDCDG00000030393	GRM4 (ENSDCDG00000030378)	tmem167b (ENSDCDG00000030374)	mapk14b (ENSDCDG00000030172) #22	ENSDCDG00000029870	LHFPL5 (ENSDCDG00000029852) #19	KIF21B (ENSDCDG00000027277)	cpne5b (ENSDCDG00000026832) #37	ENSDCDG00000026813	ADORA1 (ENSDCDG00000026810)	CHIA (ENSDCDG00000026776)	DNAJC16 (ENSDCDG00000026713)
Denticle herring	MODERN SPECIES	3	ENSDCDG00000031083	igfn1.1 (ENSDCDG00000031075)	ENSDCDG00000031071	ENSDCDG00000031058	ENSDCDG00000031054	igfn1.1 (ENSDCDG00000031051)	ENSDCDG00000031044	tmem167b (ENSDCDG00000031042)	mapk14b (ENSDCDG00000030848) #22	ENSDCDG00000030427	LHFPL5 (ENSDCDG00000030397) #19	ENSDCDG00000030395	ENSDCDG00000030393	GRM4 (ENSDCDG00000030378)	tmem167b (ENSDCDG00000030374)	mapk14b (ENSDCDG00000030172) #22	ENSDCDG00000029870	LHFPL5 (ENSDCDG00000029852) #19	KIF21B (ENSDCDG00000027277)	cpne5b (ENSDCDG00000026832) #37	ENSDCDG00000026813	ADORA1 (ENSDCDG00000026810)	CHIA (ENSDCDG00000026776)	DNAJC16 (ENSDCDG00000026713)	cdab (ENSDCDG00000026703)	ENSDCDG00000026701	ENSDCDG00000026673	camk2n1 (ENSDCDG00000026669)	ENSDCDG00000026663	ddx19b (ENSDCDG00000026277)	PUSL1 (ENSDCDG00000026265)
Atlantic herring	MODERN SPECIES	20	ENSCHAG00000019578	sypb (ENSCHAG00000020268)	plp2b (ENSCHAG00000020276)	ENSCHAG00000020290	ENSCHAG00000020305	mfsd2al2 (ENSCHAG00000020313)	ENSCHAG00000020406	rad21l1 (ENSCHAG00000020420)	fance (ENSCHAG00000020430) #10	rpl10a (ENSCHAG00000020440) #11	ENSCHAG00000020495	ENSCHAG00000020506	zgc:195245 (ENSCHAG00000020542)	si:ch211-163l21.7 (ENSCHAG00000020551)	ELAPOR1 (ENSCHAG00000020561)	mapk14b (ENSCHAG00000020731) #22	srpk1a (ENSCHAG00000021374)	lhfpl5b (ENSCHAG00000022011) #19	ENSCHAG00000022034	cpne5a (ENSCHAG00000022051) #37	dclre1b (ENSCHAG00000022202)	ENSCHAG00000022216	ENSCHAG00000022283	TPRG1L (ENSCHAG00000022297)	wrap73 (ENSCHAG00000022313)	tp73 (ENSCHAG00000022349)	rer1 (ENSCHAG00000022408)	ENSCHAG00000022436	ENSCHAG00000022683	ENSCHAG00000022907	ENSCHAG00000023125
Otophysi	ANCESTRAL SPECIES	92		ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT01090000260288	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT00950000183124.A	ENSGT00940000157261.l	ENSGT00940000159878	ENSGT00940000159288
Characiphysae	ANCESTRAL SPECIES	29	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT01090000260288	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.f	ENSGT00940000155356.c	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT00950000183124.A	ENSGT00940000157261.l	ENSGT00940000159878	ENSGT00940000159288
Characiphysae_b	ANCESTRAL SPECIES	26	ENSGT00940000155189.pb.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT01090000260288	ENSGT00940000154417.d	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.f	ENSGT00940000155356.c	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263533.b.b.a.a.b.a.a.a.a.b	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT00950000183124.A	ENSGT00940000157261.l	ENSGT00940000159878
Characoidei	ANCESTRAL SPECIES	15	ENSGT00730000111360.b	ENSGT01030000234812.a	ENSGT00940000155189.pb.a	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.f	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263533.b.b.a.a.b.a.a.a.a.b	ENSGT00940000154557	ENSGT00940000159688	ENSGT00940000157007.i.b	ENSGT00940000158177.a	ENSGT00940000160163	ENSGT00950000183124.C	ENSGT00950000183124.A	ENSGT00940000157261.l	ENSGT00940000159878
Red-bellied piranha	MODERN SPECIES	6	qrich1 (ENSPNAG00000012238)	ENSPNAG00000002138	ENSPNAG00000012179	tmcc1b (ENSPNAG00000012169)	DNAJC16 (ENSPNAG00000002113)	cdab (ENSPNAG00000012141)	ENSPNAG00000012126	ENSPNAG00000012117	acap3b (ENSPNAG00000002095)	UBE2J2 (ENSPNAG00000012052)	HIPK1 (ENSPNAG00000002064)	ENSPNAG00000011990	ENSPNAG00000011986	b3galt6 (ENSPNAG00000006035)	tmem167b (ENSPNAG00000006946)	mapk14b (ENSPNAG00000011949) #22	srpk1b (ENSPNAG00000011899) #20	LHFPL5 (ENSPNAG00000005782) #19	KIF21B (ENSPNAG00000011862)	cpne5b (ENSPNAG00000005407) #37	ADORA1 (ENSPNAG00000011747)	ENSPNAG00000011735	ENSPNAG00000011733	ENSPNAG00000001894	ENSPNAG00000001890	ENSPNAG00000001883	ENSPNAG00000011705	ENSPNAG00000001880	ENSPNAG00000011692	ENSPNAG00000011679	CHIA (ENSPNAG00000011662)
Mexicana tetra	MODERN SPECIES	14	ENSAMXG00000033226	tmcc1b (ENSAMXG00000037453)	DNAJC16 (ENSAMXG00000006988)	cdab (ENSAMXG00000032243)	ENSAMXG00000040059	camk2n1 (ENSAMXG00000037288)	ENSAMXG00000033888	ddx19b (ENSAMXG00000043100)	ENSAMXG00000044007	ENSAMXG00000034360	acap3b (ENSAMXG00000007047)	ENSAMXG00000029985	b3galt6 (ENSAMXG00000025180)	ENSAMXG00000007063	tmem167b (ENSAMXG00000042007)	mapk14b (ENSAMXG00000007071) #22	srpk1b (ENSAMXG00000007076) #20	LHFPL5 (ENSAMXG00000036005) #19	KIF21B (ENSAMXG00000007105)	ENSAMXG00000038591	ENSAMXG00000031776	cpne5b (ENSAMXG00000007156) #37	ADORA1 (ENSAMXG00000031102)	ENSAMXG00000039409	ENSAMXG00000037699	ENSAMXG00000038576	ENSAMXG00000007174	ENSAMXG00000039238	ENSAMXG00000034841	ENSAMXG00000032446	ENSAMXG00000042997
Cyprinoidei	ANCESTRAL SPECIES	79	ENSGT00940000154554.a.f	ENSGT00940000154554.a.e	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.B.a	ENSGT00940000154417.d	ENSGT01090000260288	ENSGT00950000183160.C	ENSGT00940000156199.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37
Zebrafish	MODERN SPECIES	2	SERINC3 (ENSDARG00000086133)	ENSDARG00000111669	DGKA (ENSDARG00000098175)	NABP2 (ENSDARG00000090976)	cnpy2 (ENSDARG00000007207)	zgc:113184 (ENSDARG00000098181)	nab2 (ENSDARG00000078076)	ENSDARG00000105398	ENSDARG00000002897	ENSDARG00000105387	zgc:193807 (ENSDARG00000076652)	ENSDARG00000077095	b3galt6 (ENSDARG00000038414)	ENSDARG00000059399	tmem167b (ENSDARG00000059400)	mapk14b (ENSDARG00000028721) #22	srpk1b (ENSDARG00000031560) #20	LHFPL5 (ENSDARG00000045023) #19	KIF21B (ENSDARG00000009733)	cpne5b (ENSDARG00000070919) #37	timeless (ENSDARG00000078497)	pmela (ENSDARG00000091298)	MMP19 (ENSDARG00000091557)	cdk2 (ENSDARG00000026577)	sarnp (ENSDARG00000059357)	prph (ENSDARG00000028306)	tuba2 (ENSDARG00000045014)	suox (ENSDARG00000091574)	mcrs1 (ENSDARG00000020840)	acap3b (ENSDARG00000099240)	ENSDARG00000074565
Cyprininae	ANCESTRAL SPECIES	1505																ENSGT00940000155325.a.b.a #22	ENSGT00940000155264.d #20
Cyprininae_a	ANCESTRAL SPECIES	208	ENSGT00940000156315.e.b.d	ENSGT00940000154554.a.f.d	ENSGT00940000154554.a.e.b	ENSGT00940000155851.c.b.b	ENSGT00390000000911.h.b.d	ENSGT01050000244971.A.d.a.a.f	ENSGT01050000244971.B.a.b	ENSGT00390000004940.a.b.j.b.b	ENSGT00940000156199.a.a.b	ENSGT00940000156173.e	ENSGT00940000155356.d.d	ENSGT00940000162229.a	ENSGT00390000011228.a.b	ENSGT00940000162196.j	ENSGT00940000155325.a.a.a.a.a #22	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264.d #20	ENSGT00940000159650.c	ENSGT00940000156194.m.b.a #37	ENSGT00940000155218.A.c.c	ENSGT00940000165182.d.b	ENSGT00390000005939.a.b.b.b	ENSGT00940000156490.b.b.b	ENSGT00390000014626.i	ENSGT00950000183171.A.b.a.b.c	ENSGT00940000177900	ENSGT00940000166794.f	ENSGT00940000165051	ENSGT00940000161493.h	ENSGT00530000063749.c.a.b	ENSGT00940000159915.b.i.a.b
Golden-line barbel	MODERN SPECIES	551	cdab (ENSSGRG00000029164)	ENSSGRG00000028863	ENSSGRG00000028848	camk2n1 (ENSSGRG00000028842)	ENSSGRG00000028840	ddx19b (ENSSGRG00000028449)	ENSSGRG00000028445	ENSSGRG00000028444	acap3b (ENSSGRG00000028441)	UBE2J2 (ENSSGRG00000028434)	ENSSGRG00000028433	b3galt6 (ENSSGRG00000028431)	ENSSGRG00000028429	tmem167b (ENSSGRG00000028428)	ENSSGRG00000028427 #22	ENSSGRG00000028426 #22	srpk1b (ENSSGRG00000028423) #20	KIF21B (ENSSGRG00000028279)	cpne5b (ENSSGRG00000028278) #37
Euteleosteomorpha	ANCESTRAL SPECIES	221												ENSGT00940000169818	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b	ENSGT01050000244971.A.d.a.a	ENSGT01050000244971.A.d.b	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b	ENSGT01030000235016	ENSGT00940000154417.d
Protacanthopterygii	ANCESTRAL SPECIES	6	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT01090000259987.a.a.b.f	ENSGT00940000155440.c.b	ENSGT01100000263685	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00940000162196.c	ENSGT01030000234625.A	ENSGT00940000156861	ENSGT00940000155325.a.b.a #22	ENSGT00940000161154.b	ENSGT00950000183042.b.a	ENSGT00940000156977.f	ENSGT00940000153110.B.e.a	ENSGT00940000159659.d.a	ENSGT00990000203541.a.b.a.b ##19	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a	ENSGT00940000163961.a.a.a	ENSGT00940000153336.a.a.f.b
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	202	ENSGT00550000074784.b.e.b.a	ENSGT00940000156624.c	ENSGT00940000156780	ENSGT00940000156669.b.i	ENSGT00940000158385.i	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h #20	ENSGT00990000203541.a.a.b.h.g.a #19	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d #37	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a #22	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a	ENSGT00390000004940.a.b.o.b	ENSGT00940000154417.d.g	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT00390000002762.a.a.b.a.d	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a	ENSGT00950000183208.A.d.a
Huchen	MODERN SPECIES	110													ENSHHUG00000027576 #37	b3galt6 (ENSHHUG00000027571)	tmem167b (ENSHHUG00000027563)	mapk14b (ENSHHUG00000027415) #22	DNAJC16 (ENSHHUG00000027392)	cdab (ENSHHUG00000027386)	ENSHHUG00000027382	camk2n1 (ENSHHUG00000027379)	ddx19b (ENSHHUG00000027189)	slc32a1 (ENSHHUG00000027177)	ENSHHUG00000027172	ENSHHUG00000027169	ENSHHUG00000027150	PPP1R16B (ENSHHUG00000027127)	fam210b (ENSHHUG00000027125)	shmt2 (ENSHHUG00000027121)	NXPH4 (ENSHHUG00000027120)	R3HDM2 (ENSHHUG00000026765)	ENSHHUG00000026754
Salmoninae_a	ANCESTRAL SPECIES	25	ENSGT00940000156624.c	ENSGT00940000156780	ENSGT00940000156669.b.i	ENSGT00940000158385.i	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h #20	ENSGT00990000203541.a.a.b.h.g.a #19	ENSGT00990000203541.a.a.b.h.h #19	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d #37	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a #22	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a	ENSGT01010000223025.b	ENSGT00390000004940.a.b.o.b	ENSGT00940000154417.d.g	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT00390000002762.a.a.b.a.d	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a
Oncorhynchus	ANCESTRAL SPECIES	5	ENSGT00940000158156.b.b.d	ENSGT00550000074784.b.e.a	ENSGT00940000156624.c	ENSGT00940000156669.b.i	ENSGT00940000158385.i	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.a	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h #20	ENSGT00990000203541.a.a.b.h.h #19	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d #37	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a #22	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a.a	ENSGT00390000004940.a.b.o.b	ENSGT01010000223025.b	ENSGT00940000154417.d.g	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT01010000229889	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a
Oncorhynchus_a	ANCESTRAL SPECIES	4	ENSGT00730000110997.j	ENSGT00940000158156.b.b.d	ENSGT00550000074784.b.e.a	ENSGT00940000156624.c	ENSGT00940000156669.b.i	ENSGT00940000158385.i	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.a	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00990000203541.a.a.b.h.h #19	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d #37	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a #22	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a.a	ENSGT00390000004940.a.b.o.b	ENSGT01010000223025.b	ENSGT00940000154417.d.g	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT01010000229889	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a
Chinook salmon	MODERN SPECIES	31	snrpc (ENSOTSG00005041549)	atp6ap1la (ENSOTSG00005041548)	rps23 (ENSOTSG00005041547)	appl1 (ENSOTSG00005038445)	il17rd (ENSOTSG00005037532)	arhgef3 (ENSOTSG00005035052)	ENSOTSG00005035032	ENSOTSG00005035030	ADORA1 (ENSOTSG00005035029)	ENSOTSG00005035027	LHFPL5 (ENSOTSG00005035025) #19	KIF21B (ENSOTSG00005029760)	cpne5b (ENSOTSG00005029735) #37	b3galt6 (ENSOTSG00005029734)	tmem167b (ENSOTSG00005029733)	mapk14b (ENSOTSG00005029649) #22	DNAJC16 (ENSOTSG00005029528)	cdab (ENSOTSG00005029527)	ENSOTSG00005029525	camk2n1 (ENSOTSG00005029524)	ENSOTSG00005029522	ddx19b (ENSOTSG00005029464)	slc32a1 (ENSOTSG00005029457)	ARHGAP40 (ENSOTSG00005029456)	PPP1R16B (ENSOTSG00005029443)	ENSOTSG00005029440	NXPH4 (ENSOTSG00005029437)	R3HDM2 (ENSOTSG00005028531)	INHBC (ENSOTSG00005028520)	gli1 (ENSOTSG00005028515)	ENSOTSG00005028513
Coho salmon	MODERN SPECIES	25	atp6ap1la (ENSOKIG00005003393)	ENSOKIG00005003379	ENSOKIG00005003348	APPL1 (ENSOKIG00005002587)	HESX1 (ENSOKIG00005002428)	il17rd (ENSOKIG00005002393)	arhgef3 (ENSOKIG00005002207)	ENSOKIG00005002113	ENSOKIG00005002102	ADORA1 (ENSOKIG00005002089)	LHFPL5 (ENSOKIG00005002055) #19	KIF21B (ENSOKIG00005001114)	cpne5b (ENSOKIG00005000820) #37	b3galt6 (ENSOKIG00005000779)	tmem167b (ENSOKIG00005000769)	ENSOKIG00005000491 #22	DNAJC16 (ENSOKIG00005000285)	cdab (ENSOKIG00005000248)	ENSOKIG00005000231	camk2n1 (ENSOKIG00005000210)	ENSOKIG00005000205	ENSOKIG00005000200	ddx19b (ENSOKIG00005000187)	SLC32A1 (ENSOKIG00005000179)	ENSOKIG00005000159	PPP1R16B (ENSOKIG00005000113)	ENSOKIG00005000056	ENSOKIG00005000043	NXPH4 (ENSOKIG00005000023)	ENSOKIG00005000010	R3HDM2 (ENSOKIG00005032208)
Salmo	ANCESTRAL SPECIES	6	ENSGT00550000074784.b.e.a	ENSGT00940000156624.c	ENSGT00940000156780	ENSGT00940000156669.b.i	ENSGT00940000158385.i	ENSGT00530000063735.a.b.d	ENSGT01100000263491.a.b.b.c.b.k.b.b	ENSGT01100000263491.a.b.b.c.b.k.a.b	ENSGT01030000234555.a.a.b.a.a.a.b.p	ENSGT00940000155264.h #20	ENSGT00990000203541.a.a.b.h.g.a #19	ENSGT00940000159650.e	ENSGT00940000156194.m.b.d #37	ENSGT00940000162229.e	ENSGT00940000162196.d.a.a	ENSGT00940000155325.a.b.a.c.a #22	ENSGT00940000155851.c.b	ENSGT00390000000911.h.b.i	ENSGT01050000244971.A.d.a.a	ENSGT01010000223025.b	ENSGT00390000004940.a.b.o.b	ENSGT00940000154417.d.g	ENSGT00490000043380.a.i	ENSGT00940000162174.d	ENSGT00940000154090.b.f.a	ENSGT00940000156134.p	ENSGT00390000002762.a.a.b.a.d	ENSGT00950000182883.b.a.b.a.g	ENSGT00940000155609.k.a.a	ENSGT00940000160065.g	ENSGT00940000160235.g.a
River trout	MODERN SPECIES	7	ENSSTUG00000026413	appl1 (ENSSTUG00000026537)	il17rd (ENSSTUG00000027280)	arhgef3 (ENSSTUG00000027320)	ENSSTUG00000027439	ENSSTUG00000027454	ENSSTUG00000027458	ADORA1 (ENSSTUG00000027464)	srpk1b (ENSSTUG00000027474) #20	LHFPL5 (ENSSTUG00000027502) #19	KIF21B (ENSSTUG00000027554)	ENSSTUG00000028464	cpne5b (ENSSTUG00000028494) #37	b3galt6 (ENSSTUG00000029938)	tmem167b (ENSSTUG00000029947)	mapk14b (ENSSTUG00000029968) #22	DNAJC16 (ENSSTUG00000030079)	cdab (ENSSTUG00000030408)	ENSSTUG00000030414	camk2n1 (ENSSTUG00000030424)	ddx19b (ENSSTUG00000030430)	ENSSTUG00000030692	slc32a1 (ENSSTUG00000030703)	ENSSTUG00000030723	PPP1R16B (ENSSTUG00000030736)	ENSSTUG00000030798	ENSSTUG00000030803	NXPH4 (ENSSTUG00000030818)	R3HDM2 (ENSSTUG00000029974)	INHBC (ENSSTUG00000030462)	gli1 (ENSSTUG00000030470)
Salmoninae	ANCESTRAL SPECIES	101																ENSGT00940000155325.a.b.a.c.b #22	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h	ENSGT01010000223025	ENSGT00940000159809	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h
Huchen	MODERN SPECIES	4182																mapk14b (ENSHHUG00000039175) #22	cdab (ENSHHUG00000039181)	ENSHHUG00000039190	ENSHHUG00000039201	camk2n1 (ENSHHUG00000039254)	ddx19b (ENSHHUG00000039263)	ENSHHUG00000039686	prelid3b (ENSHHUG00000039698)	aurka (ENSHHUG00000039720)	slc32a1 (ENSHHUG00000039729)
Salmoninae_a	ANCESTRAL SPECIES	29	ENSGT00940000156669.b.j	ENSGT00940000158385.j	ENSGT00530000063735.a.b.c	ENSGT00390000012411	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g #20	ENSGT00990000203541.a.a.b.h.g.b #19	ENSGT00940000159650.f	ENSGT00940000156194.m.b.c.b #37	ENSGT00940000169818	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.b.a.c.b #22	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00950000183092.a.d.a
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00940000156669.b.j	ENSGT00940000158385.j	ENSGT00530000063735.a.b.c	ENSGT00390000012411	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g #20	ENSGT00940000159650.f	ENSGT00940000156194.m.b.c.b #37	ENSGT00940000169818	ENSGT00940000162229.f	ENSGT00940000162196.d.a.b	ENSGT00940000155325.a.b.a.c.b #22	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00940000160065.h
Oncorhynchus_a	ANCESTRAL SPECIES	54	ENSGT00940000156669.b.j	ENSGT00940000158385.j	ENSGT00530000063735.a.b.c	ENSGT00390000012411	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263533.b.b.b.a.a.a.a.c.b.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.b.b	ENSGT00940000154308.A.a.b.a.a.b.a.a.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g #20	ENSGT00940000159650.f	ENSGT00970000193995.a.a	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.b.a.c.b #22	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00390000004940.a.b.o.a	ENSGT00940000154417.d.h	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00940000160065.h
Chinook salmon	MODERN SPECIES	11	ENSOTSG00005004698	il17rd (ENSOTSG00005004705)	ENSOTSG00005004743	arhgef3 (ENSOTSG00005004752)	ENSOTSG00005004980	CCDC66 (ENSOTSG00005004987)	ENSOTSG00005004995	ENSOTSG00005004996	ENSOTSG00005004997	ENSOTSG00005005000	ADORA1 (ENSOTSG00005005002)	ENSOTSG00005005011 #20	ENSOTSG00005005017	b3galt6 (ENSOTSG00005005020)	tmem167b (ENSOTSG00005005021)	mapk14b (ENSOTSG00005005030) #22	ENSOTSG00005005084	ENSOTSG00005005085	ENSOTSG00005005086	camk2n1 (ENSOTSG00005005087)	ddx19b (ENSOTSG00005005106)	ENSOTSG00005007978	prelid3b (ENSOTSG00005007979)	aurka (ENSOTSG00005007980)	slc32a1 (ENSOTSG00005007982)	ENSOTSG00005007983	ENSOTSG00005000127	ENSOTSG00005000401	NDUFA4L2 (ENSOTSG00005000738)	shmt2 (ENSOTSG00005000876)	NXPH4 (ENSOTSG00005001081)
Coho salmon	MODERN SPECIES		TASOR (ENSOKIG00005029822)	CCDC66 (ENSOKIG00005029790)	ENSOKIG00005029778	ENSOKIG00005029767	ENSOKIG00005029753	ENSOKIG00005029737	ENSOKIG00005029734	ADORA1 (ENSOKIG00005029728)	ENSOKIG00005029715	ENSOKIG00005028841 #20	KIF21B (ENSOKIG00005028309)	ENSOKIG00005028254	ENSOKIG00005028208	B3GALT6 (ENSOKIG00005028195)	TMEM167B (ENSOKIG00005028190)	MAPK14 (ENSOKIG00005027854) #22	cdab (ENSOKIG00005027770)	ENSOKIG00005027746	camk2n1 (ENSOKIG00005027717)	ENSOKIG00005027683	ddx19b (ENSOKIG00005026862)	prelid3b (ENSOKIG00005026798)	aurka (ENSOKIG00005026781)	slc32a1 (ENSOKIG00005026758)	ARHGAP40 (ENSOKIG00005026743)	ENSOKIG00005026729	PPP1R16B (ENSOKIG00005026717)	fam210b (ENSOKIG00005026712)	NDUFA4L2 (ENSOKIG00005026708)	shmt2 (ENSOKIG00005026554)	NXPH4 (ENSOKIG00005026535)
Salmo	ANCESTRAL SPECIES	33	ENSGT01100000263475.f.a.d.a.a.b.b	ENSGT00940000156669.b.j	ENSGT00940000158385.j	ENSGT00530000063735.a.b.c	ENSGT00390000012411	ENSGT00940000164807.G.a.b.e.b	ENSGT01100000263491.a.b.b.c.b.k.a.a.b.b.b	ENSGT01030000234555.a.a.b.a.a.a.b.o	ENSGT00940000155264.g #20	ENSGT00990000203541.a.a.b.h.g.b #19	ENSGT00940000159650.f	ENSGT00940000156194.m.b.c.a.b #37	ENSGT00970000193995.a.a	ENSGT00940000162229.f	ENSGT00940000162196.d.b	ENSGT00940000155325.a.b.a.c.b #22	ENSGT00390000000911.h.b.j	ENSGT01050000244971.B.a	ENSGT00940000154417.d.h	ENSGT01010000223025.a	ENSGT00950000182810.A.a.a.a	ENSGT00940000154900	ENSGT00490000043380.a.j	ENSGT00940000162174.c	ENSGT00940000154090.b.f.b	ENSGT00940000156134.o	ENSGT00940000161040.a	ENSGT00390000002762.a.a.b.a.c	ENSGT00950000182883.b.a.b.a.h	ENSGT00950000183092.a.d.a	ENSGT00940000155609.k.a.b
River trout	MODERN SPECIES	5	arhgef3 (ENSSTUG00000015877)	TASOR (ENSSTUG00000015747)	CCDC66 (ENSSTUG00000015599)	ENSSTUG00000015571	ENSSTUG00000015563	ENSSTUG00000015559	ENSSTUG00000015544	ENSSTUG00000015541	ADORA1 (ENSSTUG00000015536)	srpk1b (ENSSTUG00000013555) #20	KIF21B (ENSSTUG00000010369)	cpne5b (ENSSTUG00000010141) #37	ENSSTUG00000010132	b3galt6 (ENSSTUG00000010115)	tmem167b (ENSSTUG00000010098)	mapk14b (ENSSTUG00000009991) #22	cdab (ENSSTUG00000009913)	ENSSTUG00000009909	ENSSTUG00000009899	ddx19b (ENSSTUG00000009179)	prelid3b (ENSSTUG00000009088)	aurka (ENSSTUG00000009070)	slc32a1 (ENSSTUG00000009050)	ARHGAP40 (ENSSTUG00000009023)	PPP1R16B (ENSSTUG00000008935)	fam210b (ENSSTUG00000008899)	ENSSTUG00000008885	shmt2 (ENSSTUG00000008201)	STAC3 (ENSSTUG00000008055)	R3HDM2 (ENSSTUG00000006166)	INHBC (ENSSTUG00000006022)
Atlantic salmon	MODERN SPECIES	3	nudt3b (ENSSSAG00000112102)	rps10 (ENSSSAG00000103389)	pacsin1b (ENSSSAG00000006799)	SPDEF (ENSSSAG00000007065)	ilrun (ENSSSAG00000091907)	ENSSSAG00000112867	ENSSSAG00000059592	srpk1b (ENSSSAG00000007612) #20	ENSSSAG00000009801 #19	ENSSSAG00000009852	ENSSSAG00000082539	cpne5b (ENSSSAG00000088360) #37	ENSSSAG00000058444	ENSSSAG00000086731	ca119 (ENSSSAG00000107955)	ENSSSAG00000015707 #22	ENSSSAG00000040745	ENSSSAG00000015735	ENSSSAG00000100028	ENSSSAG00000015787	ENSSSAG00000031016	ENSSSAG00000090594	ENSSSAG00000031237	ENSSSAG00000092320	ENSSSAG00000094059	ENSSSAG00000031772	fam210b (ENSSSAG00000093027)	NDUFA4L2 (ENSSSAG00000120770)	GLYM (ENSSSAG00000040078)	NXPH4 (ENSSSAG00000045938)	STAC3 (ENSSSAG00000045942)
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a.d #22
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a.d #22
Salmo	ANCESTRAL SPECIES	16	ENSGT00940000165418	ENSGT00950000182997.a.b.b.b.a.b.h.b	ENSGT00940000155261.a.a.d	ENSGT00940000159366.f	ENSGT01010000230234	ENSGT00940000156009.A.d.t	ENSGT00940000154409.eb.a.d	ENSGT00940000155440.c.b.h.a	ENSGT01100000263685.a	ENSGT00950000183017.b.b.a.b.a.e #8	ENSGT00940000156676.d.c #9	ENSGT00390000000705 #10	ENSGT00390000008767.p #11	ENSGT00940000154102.a.g.f	ENSGT00390000011228.a.a.f	ENSGT00940000155325.a.b.a.d #22	ENSGT00940000155325.a.a.a.a.b.b #22	ENSGT00940000162464.n	ENSGT00940000161154.b.e	ENSGT00940000156977.f.b	ENSGT00940000153110.B.e.a	ENSGT00940000159659.d.a.b	ENSGT00990000203541.a.b.a.b.b ##19	ENSGT00940000162649.e.a.b	ENSGT00940000157877.a.a	ENSGT01020000230394.e.a.a.b.a.a.b.a.b.pd.b.b	ENSGT00940000166426.g	ENSGT00940000161090.B.c.b.a.b.a	ENSGT00940000161090.B.c.a.a.g	ENSGT00940000163961.a.a.a.f	ENSGT00940000163961.a.a.b
Atlantic salmon	MODERN SPECIES	6	ENSSSAG00000082941	ENSSSAG00000103569	dip2ba (ENSSSAG00000099493)	atf7a (ENSSSAG00000104450)	asb8 (ENSSSAG00000111822)	ENSSSAG00000112083	ENSSSAG00000072435	pfkma (ENSSSAG00000057094)	ENSSSAG00000061314	ENSSSAG00000060923 #8	pparb2b (ENSSSAG00000061077) #9	fance (ENSSSAG00000075224) #10	RPL10A (ENSSSAG00000086443) #11	ENSSSAG00000073073	ENSSSAG00000085184	MAPK (ENSSSAG00000075015) #22	ENSSSAG00000098480	ENSSSAG00000099760	klf15 (ENSSSAG00000073111)	ENSSSAG00000073118	ENSSSAG00000121817	ENSSSAG00000117685	ENSSSAG00000073435	ENSSSAG00000073437 ##19	ENSSSAG00000114644	ENSSSAG00000109446	ENSSSAG00000073509	ENSSSAG00000073571	zgc:171775 (ENSSSAG00000074187)	ENSSSAG00000120869	k2c8 (ENSSSAG00000074245)
River trout	MODERN SPECIES	23	SCN8A (ENSSTUG00000033206)	dip2ba (ENSSTUG00000027970)	atf7a (ENSSTUG00000027744)	asb8 (ENSSTUG00000027732)	ENSSTUG00000027689	pfkma (ENSSTUG00000018386)	ENSSTUG00000048192	def6a (ENSSTUG00000048180) #8	ppardb (ENSSTUG00000048144) #9	mkrn4 (ENSSTUG00000048122)	ENSSTUG00000048110	zgc:195245 (ENSSTUG00000048103)	ENSSTUG00000048097	si:ch211-163l21.7 (ENSSTUG00000048091)	ELAPOR1 (ENSSTUG00000047217)	MAPK14 (ENSSTUG00000046979) #22	ENSSTUG00000046969	ENSSTUG00000046931	klf15 (ENSSTUG00000046913)	CPNE9 (ENSSTUG00000046715)	LHFPL4 (ENSSTUG00000046700) ##19	ENSSTUG00000046694	ENSSTUG00000045709	zgc:171775 (ENSSTUG00000045581)	ENSSTUG00000045417	krt18a.1 (ENSSTUG00000045366)	ENSSTUG00000045348	eif4ba (ENSSTUG00000045338)	qdprb.4 (ENSSTUG00000045284)	ENSSTUG00000045227	ENSSTUG00000045224
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a.d #22
Oncorhynchus_a	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a.d #22
Coho salmon	MODERN SPECIES	8	ENSOKIG00005044461	dip2ba (ENSOKIG00005044751)	atf7a (ENSOKIG00005048245)	ENSOKIG00005048259	ENSOKIG00005048280	ENSOKIG00005048337	ENSOKIG00005048341	PFKM (ENSOKIG00005048347)	ENSOKIG00005048620	DEF6 (ENSOKIG00005048625) #8	ENSOKIG00005004275 #10	ENSOKIG00005004345	ENSOKIG00005004361	ENSOKIG00005004388	ENSOKIG00005004406	mapk14b (ENSOKIG00005004454) #22	TLR5 (ENSOKIG00005004511)	ENSOKIG00005004548	klf15 (ENSOKIG00005004576)	CPNE9 (ENSOKIG00005004627)	LHFPL4 (ENSOKIG00005004913) ##19	ENSOKIG00005004925	ENSOKIG00005004943	ENSOKIG00005004949	ENSOKIG00005005052	zgc:171775 (ENSOKIG00005005640)	ENSOKIG00005005680	krt18a.2 (ENSOKIG00005005770)	ENSOKIG00005005837	ENSOKIG00005005883	tmem106c (ENSOKIG00005006005)
Acanthomorphata	ANCESTRAL SPECIES	32	ENSGT00940000165359.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a
Cod	MODERN SPECIES	4	ENSGMOG00000019422	ENSGMOG00000036003	ENSGMOG00000019399	UBE2J2 (ENSGMOG00000019396)	acap3b (ENSGMOG00000019391)	PUSL1 (ENSGMOG00000019388)	ddx19b (ENSGMOG00000019384)	ENSGMOG00000032419	camk2n1 (ENSGMOG00000019383)	ENSGMOG00000019380	ENSGMOG00000037044	cdab (ENSGMOG00000035841)	ENSGMOG00000004489	b3galt6 (ENSGMOG00000004483)	ENSGMOG00000027727	mapk14b (ENSGMOG00000004454) #22	cyb561d2 (ENSGMOG00000010667)	ENSGMOG00000010674	bap1 (ENSGMOG00000010711)	ENSGMOG00000010730	ENSGMOG00000010764	ENSGMOG00000010797	ENSGMOG00000030121	ENSGMOG00000017477	ENSGMOG00000036890	ENSGMOG00000015959	ENSGMOG00000030746	ENSGMOG00000026272	ENSGMOG00000018622	si:dkey-19e4.5 (ENSGMOG00000018615)	SETD5 (ENSGMOG00000024408)
Euacanthomorphacea	ANCESTRAL SPECIES	1	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Pinecone sodierfish	MODERN SPECIES	19	HIPK1 (ENSMMDG00005006289)	im:7152348 (ENSMMDG00005006278)	im:7152348 (ENSMMDG00005006277)	ube2j2 (ENSMMDG00005006269)	acap3b (ENSMMDG00005006259)	PUSL1 (ENSMMDG00005006253)	ENSMMDG00005006247	ddx19b (ENSMMDG00005005136)	camk2n1 (ENSMMDG00005005086)	ENSMMDG00005005080	ENSMMDG00005005073	cdab (ENSMMDG00005004949)	DNAJC16 (ENSMMDG00005003577)	b3galt6 (ENSMMDG00005003540)	tmem167b (ENSMMDG00005003538)	mapk14b (ENSMMDG00005003522) #22	srpk1b (ENSMMDG00005003409) #20	LHFPL5 (ENSMMDG00005003393) #19	KIF21B (ENSMMDG00005003382)	cpne5b (ENSMMDG00005003370) #37	ADORA1 (ENSMMDG00005003348)	ENSMMDG00005003342	gnl3 (ENSMMDG00005003334)	glt8d1 (ENSMMDG00005003330)	spcs1 (ENSMMDG00005003328)	nek4 (ENSMMDG00005003324)	ENSMMDG00005003279	CAMK1 (ENSMMDG00005000734)	ccdc3b (ENSMMDG00005000603)	VAMP3 (ENSMMDG00005000599)	per3 (ENSMMDG00005000381)
Percomorphaceae	ANCESTRAL SPECIES	1	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Tiger tail seahorse	MODERN SPECIES	295	ENSHCOG00000010192	ENSHCOG00000010173	ube2j2 (ENSHCOG00000010139)	acap3b (ENSHCOG00000010123)	PUSL1 (ENSHCOG00000010077)	ddx19b (ENSHCOG00000010002)	ENSHCOG00000009975	ddx19b (ENSHCOG00000009963)	ENSHCOG00000009940	camk2n1 (ENSHCOG00000009926)	cdab (ENSHCOG00000009916)	DNAJC16 (ENSHCOG00000009893)	b3galt6 (ENSHCOG00000009883)	dnali1 (ENSHCOG00000000305)	tmem167b (ENSHCOG00000009858)	mapk14b (ENSHCOG00000009841) #22	srpk1b (ENSHCOG00000009791) #20	LHFPL5 (ENSHCOG00000009766) #19	KIF21B (ENSHCOG00000009750)	cpne5b (ENSHCOG00000009689) #37	ENSHCOG00000009493	ADORA1 (ENSHCOG00000009476)	ENSHCOG00000009460	gnl3 (ENSHCOG00000009446)	glt8d1 (ENSHCOG00000009430)	spcs1 (ENSHCOG00000009405)	ENSHCOG00000009398	CAMK1 (ENSHCOG00000009384)	ccdc3b (ENSHCOG00000009358)	VAMP3 (ENSHCOG00000009330)	per3 (ENSHCOG00000009320)
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Atherinomorphae	ANCESTRAL SPECIES	2	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958
Cyprinodontiformes	ANCESTRAL SPECIES	2	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
Cyprinodontoidei	ANCESTRAL SPECIES	4	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
Poeciliinae	ANCESTRAL SPECIES	4	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
Poecilia	ANCESTRAL SPECIES	20	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
NAME_6	ANCESTRAL SPECIES	10	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b.n	ENSGT00390000004940.a.b.m	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958	ENSGT00390000001509.a
Sailfin molly	MODERN SPECIES	704	ENSPLAG00000004254	ube2j2 (ENSPLAG00000004286)	acap3b (ENSPLAG00000004337)	PUSL1 (ENSPLAG00000004348)	ENSPLAG00000004360	ddx19b (ENSPLAG00000004378)	camk2n1 (ENSPLAG00000004393)	camk2n1 (ENSPLAG00000004402)	ENSPLAG00000000081	ENSPLAG00000005291	cdab (ENSPLAG00000005371)	b3galt6 (ENSPLAG00000005378)	DNAJC16 (ENSPLAG00000005469)	ENSPLAG00000005512	tmem167b (ENSPLAG00000005537)	mapk14b (ENSPLAG00000005605) #22	srpk1b (ENSPLAG00000005629) #20	LHFPL5 (ENSPLAG00000005666) #19
Guppy	MODERN SPECIES	457	ENSPREG00000002092	HIPK1 (ENSPREG00000002172)	ube2j2 (ENSPREG00000002197)	acap3b (ENSPREG00000002248)	PUSL1 (ENSPREG00000002324)	ddx19b (ENSPREG00000002342)	ENSPREG00000002383	camk2n1 (ENSPREG00000002393)	ENSPREG00000002418	ENSPREG00000002430	cdab (ENSPREG00000002451)	DNAJC16 (ENSPREG00000002458)	b3galt6 (ENSPREG00000002468)	ENSPREG00000002473	tmem167b (ENSPREG00000002491)	mapk14b (ENSPREG00000002512) #22	srpk1b (ENSPREG00000002560) #20	LHFPL5 (ENSPREG00000002594) #19	KIF21B (ENSPREG00000002626)	cpne5b (ENSPREG00000002752) #37	ADORA1 (ENSPREG00000002820)	ENSPREG00000002836	ccdc3b (ENSPREG00000002846)	CAMK1 (ENSPREG00000002868)	gnl3 (ENSPREG00000002909)	glt8d1 (ENSPREG00000002996)	spcs1 (ENSPREG00000003077)	nek4 (ENSPREG00000003144)	sort1a (ENSPREG00000003169)	psma5 (ENSPREG00000003192)	mxra8a (ENSPREG00000003226)
Platyfish	MODERN SPECIES	12	ENSXMAG00000018742	HIPK1 (ENSXMAG00000018751)	ube2j2 (ENSXMAG00000022063)	acap3b (ENSXMAG00000018796)	PUSL1 (ENSXMAG00000018846)	ENSXMAG00000025397	ddx19b (ENSXMAG00000018853)	camk2n1 (ENSXMAG00000018879)	ENSXMAG00000018885	ENSXMAG00000018911	cdab (ENSXMAG00000029412)	DNAJC16 (ENSXMAG00000018964)	b3galt6 (ENSXMAG00000019957)	ENSXMAG00000018988	tmem167b (ENSXMAG00000018989)	mapk14b (ENSXMAG00000024923) #22	srpk1b (ENSXMAG00000027147) #20	LHFPL5 (ENSXMAG00000027586) #19	ENSXMAG00000023068	KIF21B (ENSXMAG00000019051)	cpne5b (ENSXMAG00000004086) #37	ADORA1 (ENSXMAG00000004078)	ENSXMAG00000027348	ccdc3b (ENSXMAG00000004074)	CAMK1 (ENSXMAG00000004063)	gnl3 (ENSXMAG00000022565)	glt8d1 (ENSXMAG00000004038)	spcs1 (ENSXMAG00000004036)	nek4 (ENSXMAG00000004025)	sort1a (ENSXMAG00000003480)	psma5 (ENSXMAG00000004010)
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Turquoise killifish	MODERN SPECIES	1624	dip2ba (ENSNFUG00015023971)	ATF7A (ENSNFUG00015023946)	asb8 (ENSNFUG00015023934)	LARP4AA (ENSNFUG00015023911)	pfkma (ENSNFUG00015023856)	ENSNFUG00015023846	DEF6A (ENSNFUG00015023835) #8	ppardb (ENSNFUG00015023827) #9	ENSNFUG00015023823	mkrn4 (ENSNFUG00015023820)	fance (ENSNFUG00015023817) #10	RPL10A (ENSNFUG00015023812) #11	C8H1ORF106 (ENSNFUG00015023806)	zgc:195245 (ENSNFUG00015023803)	ENSNFUG00015023676	mapk14b (ENSNFUG00015023250) #22	srpk1a (ENSNFUG00015023169)	lhfpl5b (ENSNFUG00015023161) #19	CPNE5 (ENSNFUG00015023021) #37	dclre1b (ENSNFUG00015023000)	ENSNFUG00015022999	adora1b (ENSNFUG00015022998)	mmp9 (ENSNFUG00015022858)	ZNF335 (ENSNFUG00015022709)	ENSNFUG00015022697	PROK1 (ENSNFUG00015022690)	lamtor5 (ENSNFUG00015022689)	SLC16A4 (ENSNFUG00015022684)	RBM15 (ENSNFUG00015022683)	ALX3 (ENSNFUG00015022679)	ENSNFUG00015022676
Oryzias	ANCESTRAL SPECIES	1	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00390000014429.a	ENSGT00940000156378.a.a	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT01030000234563.a.a.c.b.b	ENSGT00550000074958
Oryzias_b	ANCESTRAL SPECIES	41	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37
Indian medaka	MODERN SPECIES	278													ENSOMEG00000022980	ENSOMEG00000022984	tmem167b (ENSOMEG00000022995)	mapk14b (ENSOMEG00000023039) #22	srpk1b (ENSOMEG00000023096) #20	LHFPL5 (ENSOMEG00000023125) #19	KIF21B (ENSOMEG00000023215)	tbc1d32 (ENSOMEG00000023253)	slc25a47a (ENSOMEG00000023264)
Javanese ricefish	MODERN SPECIES	19	ENSOJAG00000013968	ADORA1 (ENSOJAG00000013961)	ube2j2 (ENSOJAG00000013879)	acap3b (ENSOJAG00000011727)	PUSL1 (ENSOJAG00000011587)	ENSOJAG00000011559	ddx19b (ENSOJAG00000011382)	camk2n1 (ENSOJAG00000011350)	ENSOJAG00000011337	ENSOJAG00000011315	cdab (ENSOJAG00000011302)	DNAJC16 (ENSOJAG00000011249)	b3galt6 (ENSOJAG00000011239)	ENSOJAG00000011226	tmem167b (ENSOJAG00000011205)	mapk14b (ENSOJAG00000010584) #22	srpk1b (ENSOJAG00000010500) #20	LHFPL5 (ENSOJAG00000010458) #19	KIF21B (ENSOJAG00000008113)	cpne5b (ENSOJAG00000006930) #37	ENSOJAG00000006772	HIPK1 (ENSOJAG00000006624)	ENSOJAG00000006363	DNAJC11 (ENSOJAG00000006281)	PHF13 (ENSOJAG00000006255)	slc48a1b (ENSOJAG00000006244)	ENSOJAG00000006240	ENSOJAG00000006046	vdrb (ENSOJAG00000005902)	ENSOJAG00000005512	eif4bb (ENSOJAG00000005413)
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Pomacentridae_A	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Spiny chromis	MODERN SPECIES	447	ENSAPOG00000016077	HIPK1 (ENSAPOG00000016110)	ube2j2 (ENSAPOG00000016144)	acap3b (ENSAPOG00000016238)	PUSL1 (ENSAPOG00000016290)	ddx19b (ENSAPOG00000016313)	ENSAPOG00000016330	camk2n1 (ENSAPOG00000016339)	ENSAPOG00000016348	ENSAPOG00000016410	cdab (ENSAPOG00000016416)	DNAJC16 (ENSAPOG00000016441)	b3galt6 (ENSAPOG00000016464)	ENSAPOG00000016480	tmem167b (ENSAPOG00000016500)	mapk14b (ENSAPOG00000016559) #22	srpk1b (ENSAPOG00000016601) #20	LHFPL5 (ENSAPOG00000016618) #19	ENSAPOG00000016632
Bicolor damselfish	MODERN SPECIES	1606										ENSSPAG00000012242	cdab (ENSSPAG00000012222)	DNAJC16 (ENSSPAG00000012205)	b3galt6 (ENSSPAG00000012188)	ENSSPAG00000012177	tmem167b (ENSSPAG00000012168)	mapk14b (ENSSPAG00000012105) #22	srpk1b (ENSSPAG00000012057) #20	LHFPL5 (ENSSPAG00000012038) #19	KIF21B (ENSSPAG00000011855)
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Carangaria	ANCESTRAL SPECIES	3	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00390000011228.a.b	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Pleuronectoidei	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Tongue sole	MODERN SPECIES	2	tmf1 (ENSCSEG00000005196)	EOGT (ENSCSEG00000005187)	tafa4b (ENSCSEG00000005178)	TAFA1 (ENSCSEG00000005174)	ube2j2 (ENSCSEG00000005170)	acap3b (ENSCSEG00000005163)	PUSL1 (ENSCSEG00000005159)	ddx19b (ENSCSEG00000005149)	camk2n1 (ENSCSEG00000005147)	ENSCSEG00000005145	cdab (ENSCSEG00000005144)	DNAJC16 (ENSCSEG00000005138)	b3galt6 (ENSCSEG00000005137)	ENSCSEG00000005135	tmem167b (ENSCSEG00000005133)	mapk14b (ENSCSEG00000005124) #22	srpk1b (ENSCSEG00000005089) #20	LHFPL5 (ENSCSEG00000005083) #19	KIF21B (ENSCSEG00000005052)	cpne5b (ENSCSEG00000005029) #37	ADORA1 (ENSCSEG00000005023)	ENSCSEG00000005019	gnl3 (ENSCSEG00000005009)	glt8d1 (ENSCSEG00000005004)	spcs1 (ENSCSEG00000005000)	nek4 (ENSCSEG00000004994)	CAMK1 (ENSCSEG00000004982)	ccdc3b (ENSCSEG00000004978)	ENSCSEG00000004974	per3 (ENSCSEG00000004967)	ENSCSEG00000004965
Carangaria_A	ANCESTRAL SPECIES	7	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT01030000235016	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000178615	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Seriola	ANCESTRAL SPECIES	10	ENSGT00860000133842.m	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000177111	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.B.a	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817	ENSGT00390000001509.a
Yellowtail amberjack	MODERN SPECIES	3054	DNAJC11 (ENSSLDG00000009863)	ENSSLDG00000009848	ENSSLDG00000009836	HIPK1 (ENSSLDG00000009772)	ube2j2 (ENSSLDG00000009734)	acap3b (ENSSLDG00000009639)	PUSL1 (ENSSLDG00000009605)	ddx19b (ENSSLDG00000009584)	camk2n1 (ENSSLDG00000009570)	ENSSLDG00000009547	ENSSLDG00000009535	cdab (ENSSLDG00000009489)	DNAJC16 (ENSSLDG00000009458)	b3galt6 (ENSSLDG00000009442)	tmem167b (ENSSLDG00000009414)	mapk14b (ENSSLDG00000009350) #22	srpk1b (ENSSLDG00000009069) #20	LHFPL5 (ENSSLDG00000009007) #19	KIF21B (ENSSLDG00000008928)	cpne5b (ENSSLDG00000008814) #37	ADORA1 (ENSSLDG00000008763)	ENSSLDG00000008755	ENSSLDG00000008743	gnl3 (ENSSLDG00000008692)	glt8d1 (ENSSLDG00000008675)	spcs1 (ENSSLDG00000008657)	nek4 (ENSSLDG00000008613)	CAMK1 (ENSSLDG00000008546)	ccdc3b (ENSSLDG00000008516)	VAMP3 (ENSSLDG00000008498)	per3 (ENSSLDG00000008423)
Greater amberjack	MODERN SPECIES	37	DNAJC11 (ENSSDUG00000023081)	ENSSDUG00000023102	HIPK1 (ENSSDUG00000000082)	ENSSDUG00000000120	ube2j2 (ENSSDUG00000000145)	acap3b (ENSSDUG00000000189)	PUSL1 (ENSSDUG00000000287)	ddx19b (ENSSDUG00000000334)	camk2n1 (ENSSDUG00000000382)	ENSSDUG00000000393	ENSSDUG00000000450	cdab (ENSSDUG00000000493)	DNAJC16 (ENSSDUG00000000522)	b3galt6 (ENSSDUG00000000531)	tmem167b (ENSSDUG00000000542)	mapk14b (ENSSDUG00000000557) #22	srpk1b (ENSSDUG00000000647) #20	ENSSDUG00000000715 #19	KIF21B (ENSSDUG00000000731)	cpne5b (ENSSDUG00000000853) #37	ADORA1 (ENSSDUG00000000936)	ENSSDUG00000000955	gnl3 (ENSSDUG00000000972)	glt8d1 (ENSSDUG00000001010)	spcs1 (ENSSDUG00000001037)	nek4 (ENSSDUG00000001055)	CAMK1 (ENSSDUG00000001078)	ccdc3b (ENSSDUG00000001090)	VAMP3 (ENSSDUG00000001117)	per3 (ENSSDUG00000001160)	mxra8a (ENSSDUG00000001232)
Barramundi perch	MODERN SPECIES	71	HIPK1 (ENSLCAG00010003303)	ENSLCAG00010003326	ube2j2 (ENSLCAG00010003328)	acap3b (ENSLCAG00010003387)	PUSL1 (ENSLCAG00010003582)	ddx19b (ENSLCAG00010003592)	ENSLCAG00010003654	camk2n1 (ENSLCAG00010003656)	ENSLCAG00010003657	ENSLCAG00010003660	cdab (ENSLCAG00010003663)	DNAJC16 (ENSLCAG00010003671)	b3galt6 (ENSLCAG00010003687)	ENSLCAG00010003689	tmem167b (ENSLCAG00010003690)	mapk14b (ENSLCAG00010003698) #22	srpk1b (ENSLCAG00010003730) #20	ENSLCAG00010003741 #19	KIF21B (ENSLCAG00010003744)
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Eupecaria_B	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Perciformes	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.a #22
Cottioidei	ANCESTRAL SPECIES		ENSGT00530000063882.a	ENSGT00860000133842.m	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT01030000235016	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.a.b.a #22	ENSGT00940000155325.a.a.a.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT00390000018096	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a
Lumpfish	MODERN SPECIES	20	ENSCLMG00005003210	camk2n1 (ENSCLMG00005003213)	ENSCLMG00005003214	ddx19b (ENSCLMG00005003229)	ENSCLMG00005003301	PUSL1 (ENSCLMG00005003302)	acap3b (ENSCLMG00005003318)	ube2j2 (ENSCLMG00005006379)	HIPK1 (ENSCLMG00005006383)	ENSCLMG00005006403	ENSCLMG00005006404	ENSCLMG00005006405	DNAJC11 (ENSCLMG00005006499)	PHF13 (ENSCLMG00005006501)	tmem167b (ENSCLMG00005006505)	mapk14b (ENSCLMG00005006513) #22	srpk1b (ENSCLMG00005006795) #20	LHFPL5 (ENSCLMG00005008536) #19	KIF21B (ENSCLMG00005008541)	cpne5b (ENSCLMG00005008549) #37	ENSCLMG00005008554	ENSCLMG00005008556	ADORA1 (ENSCLMG00005008560)	ENSCLMG00005008561	gnl3 (ENSCLMG00005008562)	spcs1 (ENSCLMG00005008564)	nek4 (ENSCLMG00005008566)	CAMK1 (ENSCLMG00005008573)	ccdc3b (ENSCLMG00005011162)	ENSCLMG00005011163	apobec2a (ENSCLMG00005011165)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Zebrafish	MODERN SPECIES	23	ccdc22 (ENSDARG00000052379)	nt5dc2 (ENSDARG00000059646)	tbc1d25 (ENSDARG00000075333)	cfp (ENSDARG00000094451)	si:ch73-237c6.1 (ENSDARG00000078114)	ppardb (ENSDARG00000009473) #9	mkrn4 (ENSDARG00000028295)	fance (ENSDARG00000068870) #10	rpl10a (ENSDARG00000042905) #11	ENSDARG00000095855	ENSDARG00000078155	zgc:195245 (ENSDARG00000078917)	si:ch211-163l21.7 (ENSDARG00000034457)	ELAPOR1 (ENSDARG00000042899)	si:ch211-163l21.10 (ENSDARG00000068855)	mapk14a (ENSDARG00000000857) #22	srpk1a (ENSDARG00000073997)	lhfpl5b (ENSDARG00000056458) #19	cpne5a (ENSDARG00000061466) #37	dclre1b (ENSDARG00000068833)	ENSDARG00000110655	adora1b (ENSDARG00000075694)	zgc:110353 (ENSDARG00000039443)	mmp9 (ENSDARG00000042816)	ZNF335 (ENSDARG00000076920)	ENSDARG00000114493	ENSDARG00000114843	ENSDARG00000110283	ENSDARG00000114278	prok1 (ENSDARG00000073948)	lamtor5 (ENSDARG00000090194)
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Cyprininae_a	ANCESTRAL SPECIES	161	ENSGT00940000154554.a.f.c	ENSGT00940000154554.a.e.a	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT00990000205730	ENSGT00390000004940.a.b.j.b.a	ENSGT01090000260288.a	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.a.b.b #22	ENSGT00940000155325.b.b #22	ENSGT00940000155264.c.b #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b #37	ENSGT00940000161979.B.o.a.a	ENSGT00940000155218.A.c.d	ENSGT00390000005939.a.b.b.a	ENSGT00940000156490.b.b.a	ENSGT00390000014626.j	ENSGT00390000018845.f.c	ENSGT00950000183171.A.b.a.b.d	ENSGT00940000166794.e	ENSGT00940000161493.g	ENSGT00390000007991
Golden-line barbel	MODERN SPECIES	153													acap3b (ENSSGRG00000051187)	b3galt6 (ENSSGRG00000051185)	tmem167b (ENSSGRG00000051184)	MAPK14 (ENSSGRG00000051183) #22	srpk1b (ENSSGRG00000051146) #20	ENSSGRG00000051144 #19	KIF21B (ENSSGRG00000050852)	cpne5b (ENSSGRG00000050850) #37	ENSSGRG00000050848	ENSSGRG00000050847	bmp7a (ENSSGRG00000050846)	smim7 (ENSSGRG00000050843)	tmem38a (ENSSGRG00000050842)	thop1 (ENSSGRG00000050347)	ENSSGRG00000050315	reep6 (ENSSGRG00000050313)	ENSSGRG00000050312	APC2 (ENSSGRG00000050308)	diras1a (ENSSGRG00000050301)
Goldfish	MODERN SPECIES	873	ENSCARG00000065517	sema3gb (ENSCARG00000065529)	wasb (ENSCARG00000065567)	slc38a5b (ENSCARG00000065580)	ccdc22 (ENSCARG00000065617)	nt5dc2 (ENSCARG00000065692)	tbc1d25 (ENSCARG00000065776)	ENSCARG00000065790	ppardb (ENSCARG00000065852) #9	mkrn4 (ENSCARG00000065925)	rpl10a (ENSCARG00000065941) #11	ENSCARG00000065988	zgc:195245 (ENSCARG00000065994)	si:ch211-163l21.7 (ENSCARG00000066008)	ELAPOR1 (ENSCARG00000066029)	mapk14a (ENSCARG00000066190) #22	srpk1a (ENSCARG00000066292)	lhfpl5b (ENSCARG00000067237) #19	cpne5a (ENSCARG00000067251) #37
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Characoidei	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Mexicana tetra	MODERN SPECIES	21	slc38a5b (ENSAMXG00000007651)	ccdc22 (ENSAMXG00000007656)	nt5dc2 (ENSAMXG00000031562)	tbc1d25 (ENSAMXG00000033614)	cfp (ENSAMXG00000007669)	ENSAMXG00000042885	ppardb (ENSAMXG00000041846) #9	mkrn4 (ENSAMXG00000007674)	fance (ENSAMXG00000007675) #10	rpl10a (ENSAMXG00000032692) #11	ENSAMXG00000007679	ENSAMXG00000007680	zgc:195245 (ENSAMXG00000007681)	si:ch211-163l21.7 (ENSAMXG00000036004)	ELAPOR1 (ENSAMXG00000007684)	mapk14a (ENSAMXG00000031533) #22	srpk1a (ENSAMXG00000041841)	lhfpl5b (ENSAMXG00000007081) #19	CLPS (ENSAMXG00000035186) #18	CLPS (ENSAMXG00000042346) #18	cpne5a (ENSAMXG00000007702) #37	dclre1b (ENSAMXG00000007713)	adora1b (ENSAMXG00000007715)	ENSAMXG00000035960	zgc:110353 (ENSAMXG00000042969)	mmp9 (ENSAMXG00000007722)	mmp9 (ENSAMXG00000037117)	ZNF335 (ENSAMXG00000007732)	ENSAMXG00000007743	ENSAMXG00000007744	prok1 (ENSAMXG00000035592)
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Percomorphaceae_D	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Carangaria	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Carangaria_A	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Seriola	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Greater amberjack	MODERN SPECIES	23	dip2ba (ENSSDUG00000010745)	atf7a (ENSSDUG00000010687)	asb8 (ENSSDUG00000010667)	LARP4 (ENSSDUG00000010621)	pfkma (ENSSDUG00000010580)	def6a (ENSSDUG00000010519) #8	ppardb (ENSSDUG00000010478) #9	mkrn4 (ENSSDUG00000010454)	fance (ENSSDUG00000010430) #10	rpl10a (ENSSDUG00000010399) #11	ENSSDUG00000010379	zgc:195245 (ENSSDUG00000010356)	ENSSDUG00000010320	ENSSDUG00000010308	ELAPOR1 (ENSSDUG00000010265)	mapk14a (ENSSDUG00000010228) #22	srpk1a (ENSSDUG00000010159)	lhfpl5b (ENSSDUG00000010145) #19	cpne5a (ENSSDUG00000010097) #37	dclre1b (ENSSDUG00000010085)	adora1b (ENSSDUG00000010070)	mmp9 (ENSSDUG00000010010)	ZNF335 (ENSSDUG00000009971)	ENSSDUG00000008954	prok1 (ENSSDUG00000008879)	lamtor5 (ENSSDUG00000008806)	slc16a4 (ENSSDUG00000008780)	RBM15 (ENSSDUG00000008769)	ALX3 (ENSSDUG00000008743)	slc6a17 (ENSSDUG00000008711)	KCNC4 (ENSSDUG00000008699)
Barramundi perch	MODERN SPECIES	102	ENSLCAG00010011169	dip2ba (ENSLCAG00010008981)	atf7a (ENSLCAG00010008539)	asb8 (ENSLCAG00010008530)	LARP4 (ENSLCAG00010008525)	pfkma (ENSLCAG00010007566)	def6a (ENSLCAG00010007318) #8	ppardb (ENSLCAG00010007269) #9	mkrn4 (ENSLCAG00010007252)	fance (ENSLCAG00010007245) #10	rpl10a (ENSLCAG00010007225) #11	ENSLCAG00010007202	zgc:195245 (ENSLCAG00010007192)	ENSLCAG00010007065	ELAPOR1 (ENSLCAG00010006988)	mapk14a (ENSLCAG00010006895) #22	srpk1a (ENSLCAG00010006843)	lhfpl5b (ENSLCAG00010006826) #19	cpne5a (ENSLCAG00010006766) #37	ENSLCAG00010006715	dclre1b (ENSLCAG00010006713)	adora1b (ENSLCAG00010006710)	mmp9 (ENSLCAG00010006164)	ZNF335 (ENSLCAG00010006065)	ENSLCAG00010005986	prok1 (ENSLCAG00010005978)	lamtor5 (ENSLCAG00010005967)	slc16a4 (ENSLCAG00010005875)	RBM15 (ENSLCAG00010005842)	ALX3 (ENSLCAG00010005839)	slc6a17 (ENSLCAG00010005830)
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Eupecaria_A	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Ballan wrasse	MODERN SPECIES	302	ENSLBEG00000014481	asb8 (ENSLBEG00000014503)	LARP4 (ENSLBEG00000014537)	pfkma (ENSLBEG00000014602)	ENSLBEG00000014668	def6a (ENSLBEG00000014745) #8	ppardb (ENSLBEG00000014846) #9	mkrn4 (ENSLBEG00000014889)	fance (ENSLBEG00000014911) #10	rpl10a (ENSLBEG00000014935) #11	ENSLBEG00000014973	zgc:195245 (ENSLBEG00000015034)	smc5 (ENSLBEG00000015116)	ENSLBEG00000015190	ELAPOR1 (ENSLBEG00000015217)	mapk14a (ENSLBEG00000015284) #22	srpk1a (ENSLBEG00000015355)	lhfpl5b (ENSLBEG00000015414) #19	cpne5a (ENSLBEG00000015441) #37	dclre1b (ENSLBEG00000015562)	adora1b (ENSLBEG00000015584)	mmp9 (ENSLBEG00000015615)	ZNF335 (ENSLBEG00000015653)	prok1 (ENSLBEG00000015712)
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Cyprinodontiformes	ANCESTRAL SPECIES	4	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00530000063722.a	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Cyprinodontoidei	ANCESTRAL SPECIES	3	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
NAME_4	ANCESTRAL SPECIES	4	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Mummichog	MODERN SPECIES	2277	asb8 (ENSFHEG00000004321)	ENSFHEG00000004338	pfkma (ENSFHEG00000004399)	ENSFHEG00000004418	def6a (ENSFHEG00000004483) #8	ppardb (ENSFHEG00000004510) #9	mkrn4 (ENSFHEG00000004528)	fance (ENSFHEG00000000118) #10	rpl10a (ENSFHEG00000004562) #11	ENSFHEG00000004569	ENSFHEG00000004582	zgc:195245 (ENSFHEG00000004607)	smc5 (ENSFHEG00000004622)	ENSFHEG00000004631	ELAPOR1 (ENSFHEG00000004678)	mapk14a (ENSFHEG00000004796) #22	srpk1a (ENSFHEG00000004819)	lhfpl5b (ENSFHEG00000004829) #19	cpne5a (ENSFHEG00000004889) #37	dclre1b (ENSFHEG00000004898)	adora1b (ENSFHEG00000004910)	mmp9 (ENSFHEG00000004917)	ZNF335 (ENSFHEG00000004957)	prok1 (ENSFHEG00000004984)	lamtor5 (ENSFHEG00000004998)	slc16a4 (ENSFHEG00000005013)	RBM15 (ENSFHEG00000005024)	ENSFHEG00000005036	slc6a17 (ENSFHEG00000005060)	KCNC4 (ENSFHEG00000005071)	hspa1b (ENSFHEG00000005078)
Sheepshead minnow	MODERN SPECIES	297				ENSCVAG00000012614	ENSCVAG00000012626	ENSCVAG00000012642	ENSCVAG00000012649	ENSCVAG00000000324	ENSCVAG00000012668	ENSCVAG00000012694	ENSCVAG00000012718	zgc:195245 (ENSCVAG00000012725)	smc5 (ENSCVAG00000000763)	ENSCVAG00000001002	ELAPOR1 (ENSCVAG00000012790)	mapk14a (ENSCVAG00000012848) #22	srpk1a (ENSCVAG00000012875)	lhfpl5b (ENSCVAG00000012886) #19	cpne5a (ENSCVAG00000013042) #37	ENSCVAG00000013049	dclre1b (ENSCVAG00000013053)	adora1b (ENSCVAG00000013058)	mmp9 (ENSCVAG00000013096)	ENSCVAG00000013104	ENSCVAG00000013143	prok1 (ENSCVAG00000013149)	lamtor5 (ENSCVAG00000013158)	slc16a4 (ENSCVAG00000013170)	RBM15 (ENSCVAG00000013185)	ALX3 (ENSCVAG00000013191)	slc6a17 (ENSCVAG00000013219)
Poeciliinae	ANCESTRAL SPECIES	2	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Poecilia	ANCESTRAL SPECIES	14	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415.c
NAME_6	ANCESTRAL SPECIES	45	ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415.c
Sailfin molly	MODERN SPECIES	1166		asb8 (ENSPLAG00000013652)	ENSPLAG00000013626	pfkma (ENSPLAG00000013606)	ENSPLAG00000013508	def6a (ENSPLAG00000013498) #8	ppardb (ENSPLAG00000013453) #9	mkrn4 (ENSPLAG00000013447)	fance (ENSPLAG00000013421) #10	rpl10a (ENSPLAG00000013411) #11	ENSPLAG00000013407	zgc:195245 (ENSPLAG00000013379)	smc5 (ENSPLAG00000013370)	ENSPLAG00000013347	ELAPOR1 (ENSPLAG00000013333)	mapk14a (ENSPLAG00000013277) #22	srpk1a (ENSPLAG00000013249)	lhfpl5b (ENSPLAG00000012918) #19
Amazon molly	MODERN SPECIES	331	asb8 (ENSPFOG00000013137)	ENSPFOG00000013148	pfkma (ENSPFOG00000013294)	ENSPFOG00000024315	def6a (ENSPFOG00000013490) #8	ppardb (ENSPFOG00000013601) #9	mkrn4 (ENSPFOG00000024691)	fance (ENSPFOG00000013659) #10	rpl10a (ENSPFOG00000013715) #11	rpl10a (ENSPFOG00000013688) #11	ENSPFOG00000022141	ENSPFOG00000013738	zgc:195245 (ENSPFOG00000013816)	smc5 (ENSPFOG00000013836)	ELAPOR1 (ENSPFOG00000013990)	mapk14a (ENSPFOG00000014153) #22	srpk1a (ENSPFOG00000014203)
Guppy	MODERN SPECIES	459	atf7a (ENSPREG00000022581)	asb8 (ENSPREG00000022594)	ENSPREG00000022597	pfkma (ENSPREG00000022604)	ENSPREG00000022612	def6a (ENSPREG00000022620) #8	ppardb (ENSPREG00000022630) #9	mkrn4 (ENSPREG00000022638)	fance (ENSPREG00000022647) #10	rpl10a (ENSPREG00000022666) #11	ENSPREG00000022697	zgc:195245 (ENSPREG00000022704)	smc5 (ENSPREG00000022711)	ENSPREG00000022721	ELAPOR1 (ENSPREG00000022729)	mapk14a (ENSPREG00000022744) #22	srpk1a (ENSPREG00000022757)	lhfpl5b (ENSPREG00000022766) #19	cpne5a (ENSPREG00000022770) #37	dclre1b (ENSPREG00000022775)	ENSPREG00000022782	adora1b (ENSPREG00000022791)	mmp9 (ENSPREG00000022793)	alas2 (ENSPREG00000022800)	ENSPREG00000022805	znf362b (ENSPREG00000022807)	ENSPREG00000022814	emp3b (ENSPREG00000022827)	ENSPREG00000022830	rimkla (ENSPREG00000022833)	ENSPREG00000022840
Platyfish	MODERN SPECIES		atf7a (ENSXMAG00000010537)	asb8 (ENSXMAG00000025707)	ENSXMAG00000028242	ENSXMAG00000010519	pfkma (ENSXMAG00000010493)	ENSXMAG00000024756	def6a (ENSXMAG00000010474) #8	ppardb (ENSXMAG00000010449) #9	mkrn4 (ENSXMAG00000010448)	fance (ENSXMAG00000010442) #10	rpl10a (ENSXMAG00000027435) #11	ENSXMAG00000010428	zgc:195245 (ENSXMAG00000010427)	smc5 (ENSXMAG00000010404)	ELAPOR1 (ENSXMAG00000010362)	mapk14a (ENSXMAG00000010317) #22	srpk1a (ENSXMAG00000010290)	lhfpl5b (ENSXMAG00000010289) #19	cpne5a (ENSXMAG00000023235) #37	dclre1b (ENSXMAG00000010206)	adora1b (ENSXMAG00000010202)	mmp9 (ENSXMAG00000010153)	ZNF335 (ENSXMAG00000010129)	prok1 (ENSXMAG00000024068)	lamtor5 (ENSXMAG00000027457)	slc16a4 (ENSXMAG00000010114)	RBM15 (ENSXMAG00000020192)	ALX3 (ENSXMAG00000010113)	slc6a17 (ENSXMAG00000010082)	KCNC4 (ENSXMAG00000028069)	hspa1b (ENSXMAG00000020191)
Aplocheiloidei	ANCESTRAL SPECIES		ENSGT00940000155261.a.a	ENSGT00940000159366	ENSGT00940000154409.eb.a	ENSGT00940000155440.c.b	ENSGT00530000068920	ENSGT00950000183017.b.b.a.b.a #8	ENSGT00940000156676.d #9	ENSGT00950000183077.b	ENSGT00390000000705 #10	ENSGT00390000008767 #11	ENSGT00940000154102.a.g	ENSGT00390000011228.a.a	ENSGT00550000074816.B	ENSGT00940000173571	ENSGT00940000156861	ENSGT00940000155325.a.b.b #22	ENSGT00940000166975	ENSGT00990000203541.a.a.b.g #19	ENSGT00940000156194.m.a #37	ENSGT00940000158175	ENSGT01030000234555.a.a.b.a.a.a.a	ENSGT00940000157415	ENSGT00940000158508	ENSGT00940000166935	ENSGT00390000006247	ENSGT00940000158411	ENSGT00940000158161.e.b	ENSGT00940000160669	ENSGT00940000156542.a	ENSGT00940000158860	ENSGT00940000154813.e.b
Mangrove rivulus	MODERN SPECIES	144	asb8 (ENSKMAG00000006776)	LARP4 (ENSKMAG00000006800)	pfkma (ENSKMAG00000006849)	ENSKMAG00000006921	def6a (ENSKMAG00000006940) #8	ppardb (ENSKMAG00000006991) #9	mkrn4 (ENSKMAG00000007023)	fance (ENSKMAG00000007058) #10	rpl10a (ENSKMAG00000007076) #11	ENSKMAG00000007094	ENSKMAG00000007117	zgc:195245 (ENSKMAG00000007134)	smc5 (ENSKMAG00000007174)	ENSKMAG00000007214	ELAPOR1 (ENSKMAG00000007245)	mapk14a (ENSKMAG00000007293) #22	srpk1a (ENSKMAG00000007340)	lhfpl5b (ENSKMAG00000007398) #19	cpne5a (ENSKMAG00000007436) #37	dclre1b (ENSKMAG00000007543)
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Cichlidae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Midas cichlid	MODERN SPECIES	814	dip2ba (ENSACIG00000001052)	atf7a (ENSACIG00000001154)	asb8 (ENSACIG00000001181)	LARP4 (ENSACIG00000001198)	pfkma (ENSACIG00000001313)	def6a (ENSACIG00000001370) #8	ppardb (ENSACIG00000001422) #9	mkrn4 (ENSACIG00000001902)	fance (ENSACIG00000001924) #10	rpl10a (ENSACIG00000002041) #11	ENSACIG00000002285	zgc:195245 (ENSACIG00000002325)	ENSACIG00000002379	ENSACIG00000002710	ELAPOR1 (ENSACIG00000002726)	mapk14a (ENSACIG00000002827) #22	srpk1a (ENSACIG00000003612)	lhfpl5b (ENSACIG00000003808) #19	cpne5a (ENSACIG00000003829) #37	dclre1b (ENSACIG00000003939)	adora1b (ENSACIG00000003958)	mmp9 (ENSACIG00000003969)	ZNF335 (ENSACIG00000004020)	ENSACIG00000004094	prok1 (ENSACIG00000004300)	lamtor5 (ENSACIG00000004321)	slc16a4 (ENSACIG00000004331)	RBM15 (ENSACIG00000004343)	ALX3 (ENSACIG00000004355)	slc6a17 (ENSACIG00000004362)	KCNC4 (ENSACIG00000004388)
Pomacentridae	ANCESTRAL SPECIES																	ENSGT00940000155325.a.b.b #22
Bicolor damselfish	MODERN SPECIES	260	SCN8A (ENSSPAG00000007872)	ENSSPAG00000007758	dip2ba (ENSSPAG00000007661)	atf7a (ENSSPAG00000007596)	asb8 (ENSSPAG00000007576)	ENSSPAG00000007222	pfkma (ENSSPAG00000007101)	ENSSPAG00000007065	def6a (ENSSPAG00000007036) #8	ppardb (ENSSPAG00000007008) #9	fance (ENSSPAG00000006842) #10	rpl10a (ENSSPAG00000006785) #11	ENSSPAG00000006763	zgc:195245 (ENSSPAG00000006719)	ELAPOR1 (ENSSPAG00000006678)	mapk14a (ENSSPAG00000006594) #22	srpk1a (ENSSPAG00000006475)	lhfpl5b (ENSSPAG00000006448) #19	cpne5a (ENSSPAG00000006402) #37	dclre1b (ENSSPAG00000006390)	adora1b (ENSSPAG00000006385)	mmp9 (ENSSPAG00000006357)	ZNF335 (ENSSPAG00000006179)	ENSSPAG00000005119	prok1 (ENSSPAG00000005026)	lamtor5 (ENSSPAG00000005011)	slc16a4 (ENSSPAG00000004978)	RBM15 (ENSSPAG00000004965)	ENSSPAG00000004954	ENSSPAG00000004941	slc6a17 (ENSSPAG00000004910)
Spotted gar	MODERN SPECIES	669	G0S2 (ENSLOCG00000017937)	WDR77 (ENSLOCG00000011331)	ENSLOCG00000011323	guca1e (ENSLOCG00000011312)	guca1b (ENSLOCG00000011305)	irf6 (ENSLOCG00000011297)	zgc:112163 (ENSLOCG00000017936)	TRAF3IP3 (ENSLOCG00000011279)	atp5pb (ENSLOCG00000011269)	eps8l3b (ENSLOCG00000011248)	cpne5a (ENSLOCG00000011204) #37	KIF21B (ENSLOCG00000011178)	srpk1b (ENSLOCG00000011166) #20	LHFPL5 (ENSLOCG00000011154) #19	CLPS (ENSLOCG00000011147) #18	mapk14a (ENSLOCG00000011129) #22	ENSLOCG00000011118	MAPK13 (ENSLOCG00000011102) #24	BRPF3 (ENSLOCG00000011075) #25	TBC1D22B (ENSLOCG00000011057)	ENSLOCG00000011050	pim1 (ENSLOCG00000011041)	ENSLOCG00000011033	ptpn22 (ENSLOCG00000011020)	RSBN1 (ENSLOCG00000011013)	ENSLOCG00000010996	LRIG2 (ENSLOCG00000010986)	ENSLOCG00000010980	ENSLOCG00000010963	ENSLOCG00000010954	PLXNA2 (ENSLOCG00000010923)
Neopterygii	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	230	ENSGT00940000158320	ENSGT00390000003017.c.a.f	ENSGT00390000009630.p	ENSGT00940000156315.e.b.d	ENSGT00940000154554.a.f.d	ENSGT00940000155851.c.b.b	ENSGT00390000000911.h.b.d	ENSGT01050000244971.A.d.a.a.f	ENSGT01050000244971.B.a.b	ENSGT00390000004940.a.b.j.b.b	ENSGT00940000156199.a.a.b	ENSGT00940000155356.d.d	ENSGT00940000162229.a	ENSGT00390000011228.a.b	ENSGT00940000162196.j	ENSGT00940000155325.b.a #22	ENSGT00940000155264.c.a #20	ENSGT00940000159650.c	ENSGT00940000156194.m.b.a #37	ENSGT00940000155218.A.c.c	ENSGT00940000165182.d.b	ENSGT00390000005939.a.b.b.b	ENSGT00940000156490.b.b.b	ENSGT00390000014626.i	ENSGT00390000018845.f.d	ENSGT00950000183171.A.b.a.b.c	ENSGT00940000177900	ENSGT00940000166794.f	ENSGT00940000165051	ENSGT00940000161493.h	ENSGT00530000063749.c.a.b
Goldfish	MODERN SPECIES	2461	gata2a (ENSCARG00000066174)	ENSCARG00000066025	DNAJC16 (ENSCARG00000065607)	cdab (ENSCARG00000065572)	ENSCARG00000065569	ENSCARG00000065560	camk2n1 (ENSCARG00000065556)	ENSCARG00000065551	ENSCARG00000065544	ddx19b (ENSCARG00000065318)	acap3b (ENSCARG00000064560)	HIPK1 (ENSCARG00000064409)	b3galt6 (ENSCARG00000064400)	ENSCARG00000064390	tmem167b (ENSCARG00000064379)	MAPK14 (ENSCARG00000063961) #22	srpk1b (ENSCARG00000063704) #20	KIF21B (ENSCARG00000063454)	cpne5b (ENSCARG00000062732) #37	ENSCARG00000062673	ENSCARG00000062666	ENSCARG00000062660	bmp7a (ENSCARG00000062631)	smim7 (ENSCARG00000062612)	tmem38a (ENSCARG00000062591)	thop1 (ENSCARG00000055326)	zgc:113223 (ENSCARG00000055018)	reep6 (ENSCARG00000054984)	APC2 (ENSCARG00000054971)	diras1a (ENSCARG00000054967)	ENSCARG00000054951
Cyprininae_a	ANCESTRAL SPECIES	1269																ENSGT00940000155325.b.a #22	ENSGT00940000155264.c.a #20
Common carp reference	MODERN SPECIES	13	rpn1 (ENSCCRG00000007952)	gata2a (ENSCCRG00000059592)	itih3a.1 (ENSCCRG00000022078)	ENSCCRG00000068600	ENSCCRG00000042413	ENSCCRG00000078736	cdab (ENSCCRG00000067398)	ENSCCRG00000074024	ENSCCRG00000063506	ddx19b (ENSCCRG00000047062)	ENSCCRG00000047110	ENSCCRG00000047296	ENSCCRG00000060920	b3galt6 (ENSCCRG00000064382)	ENSCCRG00000071443	ENSCCRG00000025260 #22	srpk1b (ENSCCRG00000025390) #20	ENSCCRG00000030984 #19	ENSCCRG00000066820	cpne5b (ENSCCRG00000005799) #37	ENSCCRG00000009671	ENSCCRG00000070886	ENSCCRG00000029292	bmp7a (ENSCCRG00000029298)	thop1 (ENSCCRG00000081203)	ENSCCRG00000059765	zgc:113223 (ENSCCRG00000004333)	reep6 (ENSCCRG00000055085)	ENSCCRG00000066762	ENSCCRG00000056253	diras1a (ENSCCRG00000066953)
Cyprininae	ANCESTRAL SPECIES	245	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a	ENSGT01090000260288.a	ENSGT00940000154417.d.b	ENSGT01090000260288.b	ENSGT00940000154417.d.a.b	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000156173.e	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.b.b #22	ENSGT00940000155264.c.b #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b #37	ENSGT00940000161979.B.o.a.a	ENSGT00940000155218.A.c.d	ENSGT00940000165182.d.a	ENSGT00390000005939.a.b.b.a	ENSGT00940000156490.b.b.a
Goldfish	MODERN SPECIES	29	gata2a (ENSCARG00000053825)	ENSCARG00000053814	ENSCARG00000053804	itih3a.1 (ENSCARG00000053417)	DNAJC16 (ENSCARG00000052870)	cdab (ENSCARG00000052820)	ENSCARG00000052810	camk2n1 (ENSCARG00000052791)	ENSCARG00000052758	ddx19b (ENSCARG00000052011)	ENSCARG00000051956	acap3b (ENSCARG00000040891)	HIPK1 (ENSCARG00000040263)	b3galt6 (ENSCARG00000040228)	tmem167b (ENSCARG00000040215)	MAPK14 (ENSCARG00000039790) #22	srpk1b (ENSCARG00000035379) #20	ENSCARG00000035307	LHFPL5 (ENSCARG00000035300) #19	KIF21B (ENSCARG00000025853)	ENSCARG00000025543	cpne5b (ENSCARG00000025486) #37	ENSCARG00000025474	ENSCARG00000025434	ENSCARG00000025426	ENSCARG00000025423	bmp7a (ENSCARG00000025395)	ENSCARG00000025376	si:ch211-1a19.2 (ENSCARG00000025367)	arrdc2 (ENSCARG00000025352)	ENSCARG00000025334
Cyprininae_a	ANCESTRAL SPECIES	161	ENSGT00940000154554.a.e.a	ENSGT00940000155851.c.b.a	ENSGT00390000000911.h.b.c	ENSGT00990000205730	ENSGT00390000004940.a.b.j.b.a	ENSGT01090000260288.a	ENSGT01050000244971.B.a.a.b	ENSGT00390000004940.a.b.i	ENSGT00940000154417.d.a.a	ENSGT00950000183160.C	ENSGT00940000156199.a.a.a	ENSGT00940000155356.d.c	ENSGT00940000162229.b	ENSGT00940000162196.i	ENSGT00940000155325.a.b.b #22	ENSGT00940000155325.b.b #22	ENSGT00940000155264.c.b #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650.d	ENSGT00940000156194.m.b.b #37	ENSGT00940000161979.B.o.a.a	ENSGT00940000155218.A.c.d	ENSGT00390000005939.a.b.b.a	ENSGT00940000156490.b.b.a	ENSGT00390000014626.j	ENSGT00390000018845.f.c	ENSGT00950000183171.A.b.a.b.d	ENSGT00940000166794.e	ENSGT00940000161493.g	ENSGT00390000007991	ENSGT00530000063749.c.a.a
Common carp reference	MODERN SPECIES	42	rpn1 (ENSCCRG00000021056)	gata2a (ENSCCRG00000071341)	ENSCCRG00000046289	ENSCCRG00000046318	ENSCCRG00000046293	ENSCCRG00000074408	ENSCCRG00000078222	camk2n1 (ENSCCRG00000082890)	PUSL1 (ENSCCRG00000030849)	ddx19b (ENSCCRG00000030855)	ENSCCRG00000044703	ACAP3 (ENSCCRG00000051977)	UBE2J2 (ENSCCRG00000037899)	ENSCCRG00000052293	b3galt6 (ENSCCRG00000072978)	ENSCCRG00000049289 #22	srpk1b (ENSCCRG00000013174) #20	ENSCCRG00000013172 #19	ENSCCRG00000010692	cpne5b (ENSCCRG00000053915) #37	ENSCCRG00000005814	ENSCCRG00000005823	ENSCCRG00000060508	bmp7a (ENSCCRG00000042070)	smim7 (ENSCCRG00000042090)	tmem38a (ENSCCRG00000042012)	thop1 (ENSCCRG00000042147)	ENSCCRG00000044251	zgc:113223 (ENSCCRG00000044279)	reep6 (ENSCCRG00000044287)	ENSCCRG00000044293
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Protacanthopterygii	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Huchen	MODERN SPECIES	8304																ENSHHUG00000005849 #22	ENSHHUG00000005818	ENSHHUG00000005814
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Atherinomorphae	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Cyprinodontiformes	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Aplocheiloidei	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Turquoise killifish	MODERN SPECIES	1619	HIPK1 (ENSNFUG00015016263)	ENSNFUG00015016387	ENSNFUG00015016393	UBE2J2 (ENSNFUG00015016396)	acap3b (ENSNFUG00015016487)	ENSNFUG00015019043	PUSL1 (ENSNFUG00015019047)	DDX19 (ENSNFUG00015019079)	camk2n1 (ENSNFUG00015019431)	ENSNFUG00015019433	ENSNFUG00015019436	cdab (ENSNFUG00015019437)	DNAJC16 (ENSNFUG00015019453)	B3GALT6 (ENSNFUG00015009236)	tmem167b (ENSNFUG00015009252)	MAPK14 (ENSNFUG00015009381) #22	srpk1b (ENSNFUG00015010673) #20	LHFPL5 (ENSNFUG00015011203) #19	ENSNFUG00015011212	KIF21B (ENSNFUG00015011360)	cpne5b (ENSNFUG00015012859) #37	ENSNFUG00015013766	ADORA1 (ENSNFUG00015013772)	Nfu_g_1_021434 (ENSNFUG00015013782)	ccdc3b (ENSNFUG00015013787)	CAMK1 (ENSNFUG00015013872)	GNL3 (ENSNFUG00015015382)	GLT8D1 (ENSNFUG00015015396)	SPCS1 (ENSNFUG00015015426)	nek4 (ENSNFUG00015015439)	PSMA5 (ENSNFUG00015015714)
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Eupercaria	ANCESTRAL SPECIES																	ENSGT00940000155325.b #22
Tetraodontidae	ANCESTRAL SPECIES	1	ENSGT00530000063882.a	ENSGT00860000133842.m	ENSGT00940000165359.a	ENSGT00940000155356.d.a	ENSGT00940000156173	ENSGT00940000156199.a.a	ENSGT00950000183160.C	ENSGT00940000154417.d	ENSGT00390000004940.a.b	ENSGT01050000244971.A.d.b	ENSGT00390000000911.h.b	ENSGT00940000155851.d	ENSGT00940000155851.c.b	ENSGT00940000162229	ENSGT00940000162196	ENSGT00940000155325.b #22	ENSGT00940000155264 #20	ENSGT00990000203541.a.a.b.h #19	ENSGT00940000159650	ENSGT00940000156194.m.b #37	ENSGT00940000176117	ENSGT01030000234555.a.a.b.a.a.a.b	ENSGT01100000263491.a.b.b.c.b	ENSGT00940000158320	ENSGT00940000159273	ENSGT00390000018321	ENSGT00940000157448	ENSGT00940000156378.a.a	ENSGT00390000014429.a	ENSGT00940000158192	ENSGT00940000160817
Fugu	MODERN SPECIES	10	ENSTRUG00000030744	HIPK1 (ENSTRUG00000010772)	ube2j2 (ENSTRUG00000010675)	acap3b (ENSTRUG00000010173)	PUSL1 (ENSTRUG00000010102)	ddx19b (ENSTRUG00000009474)	ENSTRUG00000031243	camk2n1 (ENSTRUG00000026730)	ENSTRUG00000009919	cdab (ENSTRUG00000024867)	ENSTRUG00000032622	ENSTRUG00000009873	ENSTRUG00000009307	b3galt6 (ENSTRUG00000009286)	tmem167b (ENSTRUG00000020157)	MAPK14 (ENSTRUG00000008723) #22	srpk1b (ENSTRUG00000008180) #20	ENSTRUG00000008118 #19	KIF21B (ENSTRUG00000007464)	cpne5b (ENSTRUG00000006293) #37	ADORA1 (ENSTRUG00000005994)	ENSTRUG00000025285	gnl3 (ENSTRUG00000005552)	glt8d1 (ENSTRUG00000005186)	spcs1 (ENSTRUG00000031398)	nek4 (ENSTRUG00000004941)	CAMK1 (ENSTRUG00000004534)	ccdc3b (ENSTRUG00000024925)	vamp3 (ENSTRUG00000032264)	per3 (ENSTRUG00000003219)	mxra8a (ENSTRUG00000002364)
Tetraodon	DUPLICATION
Tetraodon	MODERN SPECIES	26	ENSTNIG00000005473	ENSTNIG00000005474	ENSTNIG00000005918	SPATA5 (ENSTNIG00000005483)	BARHL1 (ENSTNIG00000005484)	APOBEC2 (ENSTNIG00000005485)	kifap3b (ENSTNIG00000005488)	mpdu1b (ENSTNIG00000005491)	ENSTNIG00000005492	ENSTNIG00000005493	ENSTNIG00000005507	ENSTNIG00000005508	bcas2 (ENSTNIG00000005509)	otud3 (ENSTNIG00000005510)	ENSTNIG00000005516	ENSTNIG00000005520 #22	ENSTNIG00000005522	ENSTNIG00000005523	SULF2 (ENSTNIG00000005524)	ENSTNIG00000005527	ENSTNIG00000005529	nrd1b (ENSTNIG00000005530)	RAB3B (ENSTNIG00000005531)	orc1 (ENSTNIG00000005532)	prpf38a (ENSTNIG00000005533)	TRMT1L (ENSTNIG00000005534)	niban1a (ENSTNIG00000005535)	ntmt2 (ENSTNIG00000005536)	gorab (ENSTNIG00000005537)	prrx1b (ENSTNIG00000005538)	ENSTNIG00000005548
Tetraodon	MODERN SPECIES	26	LRFN2 (ENSTNIG00000004891)	atp1a2a (ENSTNIG00000004890)	ENSTNIG00000004889	ENSTNIG00000004888	fli1rs (ENSTNIG00000004887)	ENSTNIG00000004886	DOCK3 (ENSTNIG00000004884)	mkrn2 (ENSTNIG00000004883)	FAM107A (ENSTNIG00000004882)	ENSTNIG00000000772	ENSTNIG00000004881	smpd4 (ENSTNIG00000004880)	DCAF1 (ENSTNIG00000004879)	CTNNA2 (ENSTNIG00000004878)	tmem167b (ENSTNIG00000004877)	MAPK14 (ENSTNIG00000004876) #22	ENSTNIG00000004875	ENSTNIG00000004873	ENSTNIG00000004871	ENSTNIG00000003241	ENSTNIG00000005340	ENSTNIG00000004860	smarca4a (ENSTNIG00000004859)	ENSTNIG00000004858	ENSTNIG00000003800	sf3b3 (ENSTNIG00000004857)	ENSTNIG00000004856	DBX1 (ENSTNIG00000004855)	ckap5 (ENSTNIG00000004854)	cstpp1 (ENSTNIG00000004853)	mapk8ip1a (ENSTNIG00000004852)