Vertebrata ANCESTRAL SPECIES ENSGT00940000155527 #22 Gnathostomata ANCESTRAL SPECIES ENSGT00940000155527 #22 Euteleostomi ANCESTRAL SPECIES 1167 ENSGT00940000155527 #22 ENSGT00990000203806 Actinopterygii ANCESTRAL SPECIES 503 ENSGT00390000011749 ENSGT00410000029064 ENSGT00940000159617 ENSGT00390000017890 ENSGT00940000155527 #22 ENSGT00990000203806 Neopterygii ANCESTRAL SPECIES 112 ENSGT00940000163785.a.b ENSGT00940000154810 ENSGT00940000154259 ENSGT00940000163988 ENSGT00940000156061 ENSGT00940000160757 ENSGT01100000263500.b.a.a.a.a.b.b.b.a.a ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.D ENSGT00940000155804 ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527 #22 ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT00390000017890 ENSGT00940000159617 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000001491.a ENSGT00390000010434.a ENSGT00940000168370 ENSGT00390000012556 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000159769.b ENSGT00530000063821.b.b Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 383 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.D ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00990000203806 Clupeocephala ANCESTRAL SPECIES 693 ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a Euteleosteomorpha ANCESTRAL SPECIES 103 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00390000003601.b ENSGT01060000248860 ENSGT00940000157580.a.b ENSGT00940000160654 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g Protacanthopterygii ANCESTRAL SPECIES 159 ENSGT00390000003601.b ENSGT00940000157580.a.b ENSGT00940000160654 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000153617.C.e.a ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00980000201267 ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000157037.a.c.b ENSGT00940000164532.b ENSGT00940000164532.a ENSGT00940000156228.p ENSGT00940000167973 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Salmo ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Atlantic salmon MODERN SPECIES 639 ENSSSAG00000116345 #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Coho salmon MODERN SPECIES 36 hmx4 (ENSOKIG00005025373) ENSOKIG00005025350 CPZ (ENSOKIG00005025279) PI4K2B (ENSOKIG00005024998) ppp2r2ca (ENSOKIG00005024979) WFS1 (ENSOKIG00005024832) crmp1 (ENSOKIG00005024805) ENSOKIG00005024252 ENSOKIG00005044058 ENSOKIG00005044034 ENSOKIG00005044009 ENSOKIG00005043992 exosc9 (ENSOKIG00005043978) ENSOKIG00005043970 TYRP1 (ENSOKIG00005043867) ENSOKIG00005043845 #22 NOCT (ENSOKIG00005043798) ENSOKIG00005043717 NOCT (ENSOKIG00005043631) elf2b (ENSOKIG00005043556) RAB33B (ENSOKIG00005043544) ENSOKIG00005043519 ENSOKIG00005043498 SCOC (ENSOKIG00005043447) ENSOKIG00005043315 ENSOKIG00005043298 ENSOKIG00005043177 ENSOKIG00005043170 ENSOKIG00005043162 ENSOKIG00005043150 ENSOKIG00005043140 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ##22 ENSOMYG00000073461 ##22 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 ENSOMYG00000069257 ENSOMYG00000035779 ENSOMYG00000039760 #22 ENSOMYG00000059560 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000155527.j.b.d.a ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155527.j.b.d.a ##22 Salmo ANCESTRAL SPECIES 273 ENSGT00940000155527.j.b.d.a ##22 ENSGT00390000017890.b.a ENSGT00410000029064.a ENSGT00390000011749 ENSGT00410000029064.b ENSGT00390000001491.a.i ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l.d.a Atlantic salmon MODERN SPECIES 640 ENSSSAG00000107806 ##22 ENSSSAG00000065203 SMIM18 (ENSSSAG00000120419) gtf2e2 (ENSSSAG00000040128) ENSSSAG00000035612 ENSSSAG00000112233 ENSSSAG00000004256 Huchen MODERN SPECIES 3691 ENSHHUG00000026208 ##22 ENSHHUG00000026193 ENSHHUG00000026184 Salmoninae ANCESTRAL SPECIES 1037 ENSGT00940000155527.j.b.d.b ##22 ENSGT00390000017890.b.a ENSGT00410000029064 ENSGT00390000011749 ENSGT01000000218684 Salmoninae_a ANCESTRAL SPECIES 254 ENSGT00940000155527.j.b.d.b ##22 ENSGT00390000017890.b.a ENSGT00410000029064.a ENSGT00390000011749 ENSGT00410000029064.b Oncorhynchus ANCESTRAL SPECIES 144 ENSGT00940000155527.j.b.d.b ##22 ENSGT00390000017890.b.a.l ENSGT00390000017890.b.a.k ENSGT00390000011749.q.a ENSGT00410000029064.a ENSGT00390000001491.a ENSGT00390000005197.a.cb.f.b.a ENSGT00940000165832.r.b ENSGT00940000157037.a.c.b ENSGT00940000164532.a ENSGT00940000164532.b.b ENSGT00940000156228.p ENSGT00940000167973.e.b.b.b Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 47 ENSOMYG00000059258 ##22 ENSOMYG00000074253 ENSOMYG00000074924 ENSOMYG00000055128 ENSOMYG00000065159 ENSOMYG00000050874 ENSOMYG00000057321 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ##22 ENSOMYG00000073461 ##22 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 ENSOMYG00000069257 ENSOMYG00000035779 ENSOMYG00000039760 #22 ENSOMYG00000059560 Oncorhynchus_a ANCESTRAL SPECIES 224 ENSGT00940000155527.j.b.d.b ##22 ENSGT00390000017890.b.a.k ENSGT00390000011749.q.a ENSGT00410000029064.a ENSGT00390000001491.a ENSGT00390000000214.a.b.l.d.b ENSGT00940000157037.a.c.b ENSGT00940000164532.a ENSGT00940000164532.b.b ENSGT00940000156228.p ENSGT00940000167973.f.a Coho salmon MODERN SPECIES 1405 ENSOKIG00005049191 ##22 DCTN6 (ENSOKIG00005049198) gtf2e2 (ENSOKIG00005049211) smim18 (ENSOKIG00005049217) ENSOKIG00005049228 ENSOKIG00005049263 ENSOKIG00005049322 ENSOKIG00005049577 Huchen MODERN SPECIES 6425 ENSHHUG00000025630 ##22 Northern pike MODERN SPECIES 24 chic2 (ENSELUG00000009642) fip1l1b (ENSELUG00000001280) kitb (ENSELUG00000009687) ENSELUG00000009271 CLOCK (ENSELUG00000001519) ENSELUG00000009792 exoc1l (ENSELUG00000009805) smc2 (ENSELUG00000009845) ecpas (ENSELUG00000009962) kdm4c (ENSELUG00000010046) ENSELUG00000001468 ENSELUG00000027629 ENSELUG00000026828 TYRP1 (ENSELUG00000010406) ENSELUG00000010446 ADGRL3 (ENSELUG00000010500) #22 ENSELUG00000031260 DCTN6 (ENSELUG00000010524) gtf2e2 (ENSELUG00000010556) smim18 (ENSELUG00000010534) ENSELUG00000010588 ENSELUG00000028012 rbpja (ENSELUG00000034120) ENSELUG00000026247 rbpja (ENSELUG00000010624) STIM2 (ENSELUG00000010815) ENSELUG00000027435 ENSELUG00000010919 ENSELUG00000010945 ENSELUG00000010981 ENSELUG00000028614 Acanthomorphata ANCESTRAL SPECIES 40 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Cod DUPLICATION Cod MODERN SPECIES 16 ENSGMOG00000020022 usp43a (ENSGMOG00000027418) ENSGMOG00000023557 cfap52 (ENSGMOG00000018826) ENSGMOG00000024895 ENSGMOG00000022966 ENSGMOG00000018803 stx8 (ENSGMOG00000018789) ENSGMOG00000020061 ENSGMOG00000005339 ENSGMOG00000005282 ENSGMOG00000005228 ENSGMOG00000005206 ENSGMOG00000005190 ENSGMOG00000031432 ENSGMOG00000034123 #22 ENSGMOG00000023389 ENSGMOG00000025924 #22 SMIM18 (ENSGMOG00000005036) GTF2E2 (ENSGMOG00000005020) DCTN6 (ENSGMOG00000005001) ENSGMOG00000004969 rbpja (ENSGMOG00000004951) ENSGMOG00000004792 ENSGMOG00000000689 ENSGMOG00000031805 ENSGMOG00000026775 ENSGMOG00000034682 ENSGMOG00000025853 ENSGMOG00000025268 ENSGMOG00000033539 Cod MODERN SPECIES 16 ENSGMOG00000023557 cfap52 (ENSGMOG00000018826) ENSGMOG00000024895 ENSGMOG00000022966 ENSGMOG00000018803 stx8 (ENSGMOG00000018789) ENSGMOG00000020061 ENSGMOG00000005339 ENSGMOG00000005282 ENSGMOG00000005228 ENSGMOG00000005206 ENSGMOG00000005190 ENSGMOG00000031432 ENSGMOG00000034123 #22 ENSGMOG00000023389 ENSGMOG00000025924 #22 SMIM18 (ENSGMOG00000005036) GTF2E2 (ENSGMOG00000005020) DCTN6 (ENSGMOG00000005001) ENSGMOG00000004969 rbpja (ENSGMOG00000004951) ENSGMOG00000004792 ENSGMOG00000000689 ENSGMOG00000031805 ENSGMOG00000026775 ENSGMOG00000034682 ENSGMOG00000025853 ENSGMOG00000025268 ENSGMOG00000033539 ENSGMOG00000009655 ENSGMOG00000006707 Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Pinecone sodierfish MODERN SPECIES ENSMMDG00005002635 slc34a2a (ENSMMDG00005002751) ENSMMDG00005003713 ENSMMDG00005003720 chic2 (ENSMMDG00005003725) fip1l1b (ENSMMDG00005003737) kitb (ENSMMDG00005003764) clockb (ENSMMDG00005004044) exoc1l (ENSMMDG00005006062) smc2 (ENSMMDG00005006069) ecpas (ENSMMDG00005006181) kdm4c (ENSMMDG00005008177) ENSMMDG00005008242 TYRP1 (ENSMMDG00005008254) ENSMMDG00005008262 ADGRL3 (ENSMMDG00005008289) #22 ENSMMDG00005008314 gtf2e2 (ENSMMDG00005008318) smim18 (ENSMMDG00005008323) ENSMMDG00005008328 ENSMMDG00005008335 rbpja (ENSMMDG00005008348) STIM2 (ENSMMDG00005008421) ENSMMDG00005008425 ENSMMDG00005008437 ENSMMDG00005008446 ENSMMDG00005008476 ENSMMDG00005008483 ENSMMDG00005008494 ITLN1 (ENSMMDG00005008500) crmp1 (ENSMMDG00005008507) Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Tiger tail seahorse MODERN SPECIES 518 ENSHCOG00000015872 ENSHCOG00000015868 chic2 (ENSHCOG00000015857) fip1l1b (ENSHCOG00000015834) ENSHCOG00000015822 ENSHCOG00000015818 clockb (ENSHCOG00000015784) exoc1l (ENSHCOG00000015416) smc2 (ENSHCOG00000015385) ENSHCOG00000015311 ecpas (ENSHCOG00000015292) kdm4c (ENSHCOG00000015229) ENSHCOG00000015136 TYRP1 (ENSHCOG00000015079) ENSHCOG00000015042 ADGRL3 (ENSHCOG00000014889) #22 ENSHCOG00000014214 gtf2e2 (ENSHCOG00000014209) DCTN6 (ENSHCOG00000014195) ENSHCOG00000014189 STIM2 (ENSHCOG00000014160) ENSHCOG00000013791 ENSHCOG00000013764 crmp1 (ENSHCOG00000013745) WFS1 (ENSHCOG00000013705) ppp2r2ca (ENSHCOG00000013679) hpf1 (ENSHCOG00000013653) ENSHCOG00000013648 ANK2 (ENSHCOG00000013635) Percomorphaceae_B ANCESTRAL SPECIES ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g Ovalentaria ANCESTRAL SPECIES ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Pomacentridae ANCESTRAL SPECIES 8 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000177601 ENSGT00940000155279.C.a.b.f Pomacentridae_A ANCESTRAL SPECIES ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Amphiprion ANCESTRAL SPECIES ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00940000159842.pc.a.a.b.b.b.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f Orange clownfish MODERN SPECIES 17 slc34a2a (ENSAPEG00000022303) ENSAPEG00000022298 ENSAPEG00000022275 chic2 (ENSAPEG00000022251) fip1l1b (ENSAPEG00000022229) kitb (ENSAPEG00000022173) clockb (ENSAPEG00000022094) exoc1l (ENSAPEG00000022070) smc2 (ENSAPEG00000021997) ecpas (ENSAPEG00000021886) kdm4c (ENSAPEG00000021825) ENSAPEG00000021741 TYRP1 (ENSAPEG00000021687) ENSAPEG00000021642 ENSAPEG00000021616 ADGRL3 (ENSAPEG00000021421) #22 ENSAPEG00000021388 smim18 (ENSAPEG00000021366) gtf2e2 (ENSAPEG00000021340) DCTN6 (ENSAPEG00000021316) HGSNAT (ENSAPEG00000021302) rbpja (ENSAPEG00000021264) ENSAPEG00000021067 ENSAPEG00000021025 ENSAPEG00000020969 crmp1 (ENSAPEG00000020908) WFS1 (ENSAPEG00000020866) ppp2r2ca (ENSAPEG00000020822) ENSAPEG00000020790 hpf1 (ENSAPEG00000020760) ENSAPEG00000020724 Clown anemonefish MODERN SPECIES 1451 ENSAOCG00000003549 TYRP1 (ENSAOCG00000003527) ENSAOCG00000003491 ADGRL3 (ENSAOCG00000003408) #22 mibp2 (ENSAOCG00000003342) gtf2e2 (ENSAOCG00000000085) smim18 (ENSAOCG00000003332) DCTN6 (ENSAOCG00000003326) HGSNAT (ENSAOCG00000003320) rbpja (ENSAOCG00000003307) ENSAOCG00000003287 Spiny chromis MODERN SPECIES 363 ENSAPOG00000002897 TYRP1 (ENSAPOG00000002999) ENSAPOG00000003157 ENSAPOG00000003232 ADGRL3 (ENSAPOG00000003416) #22 smim18 (ENSAPOG00000003456) gtf2e2 (ENSAPOG00000003480) DCTN6 (ENSAPOG00000003515) HGSNAT (ENSAPOG00000003539) rbpja (ENSAPOG00000003569) STIM2 (ENSAPOG00000003635) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 299 ENSSPAG00000017506 ENSSPAG00000017519 chic2 (ENSSPAG00000017538) fip1l1b (ENSSPAG00000017564) kitb (ENSSPAG00000017583) clockb (ENSSPAG00000017640) exoc1l (ENSSPAG00000017743) smc2 (ENSSPAG00000017757) ENSSPAG00000017806 ecpas (ENSSPAG00000017833) ENSSPAG00000017961 ENSSPAG00000017995 ENSSPAG00000018086 TYRP1 (ENSSPAG00000018509) ENSSPAG00000018541 ADGRL3 (ENSSPAG00000018591) #22 gtf2e2 (ENSSPAG00000018750) smim18 (ENSSPAG00000018779) DCTN6 (ENSSPAG00000018797) ENSSPAG00000018839 rbpja (ENSSPAG00000018868) STIM2 (ENSSPAG00000018902) ENSSPAG00000018914 ENSSPAG00000018928 crmp1 (ENSSPAG00000018953) WFS1 (ENSSPAG00000018975) ppp2r2ca (ENSSPAG00000018993) ENSSPAG00000019008 ENSSPAG00000019019 hpf1 (ENSSPAG00000019040) ENSSPAG00000019071 Bicolor damselfish MODERN SPECIES 838 TYRP1 (ENSSPAG00000004062) LURAP1L (ENSSPAG00000004054) ENSSPAG00000003940 ENSSPAG00000003912 #22 Cichlidae ANCESTRAL SPECIES 3 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Midas cichlid MODERN SPECIES 274 ADGRL3 (ENSACIG00000014545) #22 ENSACIG00000014529 smim18 (ENSACIG00000014520) gtf2e2 (ENSACIG00000014507) DCTN6 (ENSACIG00000014499) ENSACIG00000014471 rbpja (ENSACIG00000014433) STIM2 (ENSACIG00000014212) ENSACIG00000014185 ENSACIG00000014168 ENSACIG00000014159 ENSACIG00000014151 ENSACIG00000014138 ENSACIG00000014131 ENSACIG00000014115 crmp1 (ENSACIG00000012963) Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Nile tilapia MODERN SPECIES 18 ENSONIG00000030677 slc34a2a (ENSONIG00000041326) ociad1 (ENSONIG00000017989) ENSONIG00000031405 chic2 (ENSONIG00000041516) fip1l1b (ENSONIG00000008785) kitb (ENSONIG00000008788) clockb (ENSONIG00000008797) exoc1l (ENSONIG00000008809) smc2 (ENSONIG00000008811) ecpas (ENSONIG00000008818) kdm4c (ENSONIG00000008824) ENSONIG00000008832 TYRP1 (ENSONIG00000008846) ENSONIG00000029433 ADGRL3 (ENSONIG00000008860) #22 smim18 (ENSONIG00000043015) gtf2e2 (ENSONIG00000008865) DCTN6 (ENSONIG00000008868) HGSNAT (ENSONIG00000008872) rbpja (ENSONIG00000043047) STIM2 (ENSONIG00000008875) ENSONIG00000042062 ENSONIG00000037076 ENSONIG00000008880 crmp1 (ENSONIG00000008887) WFS1 (ENSONIG00000008897) ppp2r2ca (ENSONIG00000008902) ENSONIG00000008905 hpf1 (ENSONIG00000008911) ENSONIG00000008914 Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 301 slc34a2a (ENSNBRG00000017895) ENSNBRG00000017877 ENSNBRG00000017873 chic2 (ENSNBRG00000017853) fip1l1b (ENSNBRG00000017832) ENSNBRG00000017814 ENSNBRG00000017792 CLOCK (ENSNBRG00000017733) exoc1l (ENSNBRG00000017710) smc2 (ENSNBRG00000017664) ecpas (ENSNBRG00000017570) kdm4c (ENSNBRG00000017522) ENSNBRG00000017456 TYRP1 (ENSNBRG00000017425) ENSNBRG00000017338 ADGRL3 (ENSNBRG00000017271) #22 smim18 (ENSNBRG00000017249) gtf2e2 (ENSNBRG00000017242) DCTN6 (ENSNBRG00000017226) HGSNAT (ENSNBRG00000017214) rbpja (ENSNBRG00000017183) STIM2 (ENSNBRG00000017167) ENSNBRG00000017148 crmp1 (ENSNBRG00000017119) WFS1 (ENSNBRG00000017107) ppp2r2ca (ENSNBRG00000017086) ENSNBRG00000017070 hpf1 (ENSNBRG00000017051) ENSNBRG00000017029 ENSNBRG00000017003 ENSNBRG00000016961 Lyretail cichlid MODERN SPECIES 406 ENSNBRG00000023355 ccdc149a (ENSNBRG00000023359) ENSNBRG00000023387 PPARGC1A (ENSNBRG00000023403) gba3 (ENSNBRG00000023414) ADGRA3 (ENSNBRG00000023430) KCNIP4 (ENSNBRG00000023439) sec24d (ENSNBRG00000023448) ENSNBRG00000023471 myoz2a (ENSNBRG00000023482) ENSNBRG00000023490 PTPRD (ENSNBRG00000023501) TYRP1 (ENSNBRG00000023511) LURAP1L (ENSNBRG00000023518) MPDZ (ENSNBRG00000023524) ENSNBRG00000023536 #22 ENSNBRG00000023541 Haplochromini ANCESTRAL SPECIES 3 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Burton s mouthbrooder MODERN SPECIES 593 fip1l1b (ENSHBUG00000013978) kitb (ENSHBUG00000014002) clockb (ENSHBUG00000014187) exoc1l (ENSHBUG00000014198) smc2 (ENSHBUG00000014284) ecpas (ENSHBUG00000014406) ENSHBUG00000014453 ENSHBUG00000014479 ENSHBUG00000000425 TYRP1 (ENSHBUG00000014613) ENSHBUG00000014642 ADGRL3 (ENSHBUG00000014840) #22 smim18 (ENSHBUG00000014870) gtf2e2 (ENSHBUG00000014885) DCTN6 (ENSHBUG00000014920) HGSNAT (ENSHBUG00000014941) rbpja (ENSHBUG00000015000) ENSHBUG00000015027 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 P. nyererei MODERN SPECIES 482 slc34a2a (ENSPNYG00000016059) ENSPNYG00000016051 ENSPNYG00000016022 chic2 (ENSPNYG00000016011) ENSPNYG00000015994 fip1l1b (ENSPNYG00000015976) kitb (ENSPNYG00000015929) clockb (ENSPNYG00000015652) exoc1l (ENSPNYG00000015577) smc2 (ENSPNYG00000015529) ecpas (ENSPNYG00000015414) kdm4c (ENSPNYG00000015367) ENSPNYG00000015301 TYRP1 (ENSPNYG00000015263) ENSPNYG00000015247 ADGRL3 (ENSPNYG00000015202) #22 ENSPNYG00000015185 smim18 (ENSPNYG00000015178) gtf2e2 (ENSPNYG00000015163) DCTN6 (ENSPNYG00000015135) HGSNAT (ENSPNYG00000015105) rbpja (ENSPNYG00000015075) STIM2 (ENSPNYG00000015047) ENSPNYG00000015030 ENSPNYG00000015013 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000181745 ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.a.c ENSGT01100000263949.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f Eastern happy MODERN SPECIES 18 ENSACLG00000009861 ENSACLG00000010405 ENSACLG00000010406 fip1l1b (ENSACLG00000010418) kitb (ENSACLG00000010468) clockb (ENSACLG00000010583) exoc1l (ENSACLG00000010957) smc2 (ENSACLG00000010966) ecpas (ENSACLG00000011055) ENSACLG00000011182 ENSACLG00000011213 ENSACLG00000011227 ENSACLG00000011719 TYRP1 (ENSACLG00000011752) ENSACLG00000011772 ADGRL3 (ENSACLG00000011861) #22 gtf2e2 (ENSACLG00000011939) smim18 (ENSACLG00000011954) DCTN6 (ENSACLG00000011976) HGSNAT (ENSACLG00000012041) rbpja (ENSACLG00000012078) STIM2 (ENSACLG00000012115) ENSACLG00000012155 ENSACLG00000012186 ENSACLG00000012221 crmp1 (ENSACLG00000012241) WFS1 (ENSACLG00000012306) ppp2r2ca (ENSACLG00000012319) ENSACLG00000012374 hpf1 (ENSACLG00000012405) ENSACLG00000012468 Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005023831 chic2 (ENSMZEG00005023830) ENSMZEG00005023829 fip1l1b (ENSMZEG00005023828) kitb (ENSMZEG00005023827) clockb (ENSMZEG00005023826) exoc1l (ENSMZEG00005023825) smc2 (ENSMZEG00005023824) ecpas (ENSMZEG00005023823) ENSMZEG00005023822 ENSMZEG00005023821 ENSMZEG00005023820 ENSMZEG00005023819 TYRP1 (ENSMZEG00005023818) ENSMZEG00005023817 ADGRL3 (ENSMZEG00005023776) #22 smim18 (ENSMZEG00005023754) gtf2e2 (ENSMZEG00005023750) DCTN6 (ENSMZEG00005023748) HGSNAT (ENSMZEG00005023744) rbpja (ENSMZEG00005023737) STIM2 (ENSMZEG00005023732) ENSMZEG00005023729 ENSMZEG00005023726 ENSMZEG00005023725 WDR19 (ENSMZEG00005023719) rfc1 (ENSMZEG00005023710) rpl9 (ENSMZEG00005023706) lias (ENSMZEG00005023703) ugdh (ENSMZEG00005023700) map9 (ENSMZEG00005023698) Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Poecilia ANCESTRAL SPECIES 6 ENSGT00530000063707.a ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 NAME_6 ANCESTRAL SPECIES 47 ENSGT00530000063707.a ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Amazon molly MODERN SPECIES 295 atf7ip (ENSPFOG00000014516) septin3 (ENSPFOG00000014541) suz12b (ENSPFOG00000014624) chic2 (ENSPFOG00000014707) ENSPFOG00000014723 fip1l1b (ENSPFOG00000014745) kitb (ENSPFOG00000014822) clockb (ENSPFOG00000015083) exoc1l (ENSPFOG00000015164) smc2 (ENSPFOG00000015169) ecpas (ENSPFOG00000015283) ENSPFOG00000015484 ENSPFOG00000015661 TYRP1 (ENSPFOG00000016088) ENSPFOG00000016179 ADGRL3 (ENSPFOG00000016241) #22 gtf2e2 (ENSPFOG00000016382) smim18 (ENSPFOG00000020146) ENSPFOG00000016433 ENSPFOG00000016453 rbpja (ENSPFOG00000016494) STIM2 (ENSPFOG00000016556) ENSPFOG00000024524 ENSPFOG00000016592 ENSPFOG00000016595 crmp1 (ENSPFOG00000016623) WFS1 (ENSPFOG00000016702) ppp2r2ca (ENSPFOG00000016742) ENSPFOG00000016766 hpf1 (ENSPFOG00000016797) ANK2 (ENSPFOG00000016848) Sailfin molly MODERN SPECIES 533 ADGRL3 (ENSPLAG00000021073) #22 ENSPLAG00000021021 gtf2e2 (ENSPLAG00000021007) smim18 (ENSPLAG00000020984) ENSPLAG00000020962 ENSPLAG00000020920 rbpja (ENSPLAG00000020897) STIM2 (ENSPLAG00000020878) Guppy MODERN SPECIES 439 atf7ip (ENSPREG00000012796) septin3 (ENSPREG00000012774) ENSPREG00000012762 suz12b (ENSPREG00000012644) chic2 (ENSPREG00000012604) fip1l1b (ENSPREG00000012535) kitb (ENSPREG00000012489) CLOCK (ENSPREG00000011939) exoc1l (ENSPREG00000011864) smc2 (ENSPREG00000011769) ecpas (ENSPREG00000011321) ENSPREG00000011230 ENSPREG00000011036 TYRP1 (ENSPREG00000010917) ENSPREG00000010850 ADGRL3 (ENSPREG00000010586) #22 smim18 (ENSPREG00000010507) gtf2e2 (ENSPREG00000010486) DCTN6 (ENSPREG00000010472) ENSPREG00000010444 rbpja (ENSPREG00000010297) STIM2 (ENSPREG00000010192) ENSPREG00000010148 ENSPREG00000010138 ENSPREG00000010129 crmp1 (ENSPREG00000010103) WFS1 (ENSPREG00000010077) ppp2r2ca (ENSPREG00000010056) hpf1 (ENSPREG00000010038) ANK2 (ENSPREG00000009960) camk2d2 (ENSPREG00000009806) Platyfish MODERN SPECIES 19 septin3 (ENSXMAG00000017559) ENSXMAG00000029998 suz12b (ENSXMAG00000017579) chic2 (ENSXMAG00000020937) fip1l1b (ENSXMAG00000017620) kitb (ENSXMAG00000017634) clockb (ENSXMAG00000028575) exoc1l (ENSXMAG00000022359) smc2 (ENSXMAG00000004544) ENSXMAG00000027231 ENSXMAG00000026276 kdm4c (ENSXMAG00000023645) ENSXMAG00000011984 TYRP1 (ENSXMAG00000012045) ENSXMAG00000012077 ADGRL3 (ENSXMAG00000012102) #22 ENSXMAG00000021800 gtf2e2 (ENSXMAG00000012141) smim18 (ENSXMAG00000019693) ENSXMAG00000023015 ENSXMAG00000012177 rbpja (ENSXMAG00000012207) STIM2 (ENSXMAG00000012254) ENSXMAG00000026434 ENSXMAG00000012258 crmp1 (ENSXMAG00000012278) WFS1 (ENSXMAG00000012351) ppp2r2ca (ENSXMAG00000012375) ENSXMAG00000013671 hpf1 (ENSXMAG00000012400) ENSXMAG00000012408 NAME_4 ANCESTRAL SPECIES 469 ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 Mummichog MODERN SPECIES 425 TYRP1 (ENSFHEG00000000865) ENSFHEG00000006087 ADGRL3 (ENSFHEG00000006061) #22 ENSFHEG00000006009 Sheepshead minnow MODERN SPECIES 134 TYRP1 (ENSCVAG00000021453) ENSCVAG00000020781 ADGRL3 (ENSCVAG00000020732) #22 fibinb (ENSCVAG00000020552) bbox1 (ENSCVAG00000020540) MADD (ENSCVAG00000020510) nr1h3 (ENSCVAG00000019997) arl14ep (ENSCVAG00000019971) ENSCVAG00000019937 KCNA4 (ENSCVAG00000019614) cd151l (ENSCVAG00000019601) TMEM138 (ENSCVAG00000019572) ENSCVAG00000019551 ddb1 (ENSCVAG00000019531) tspan4a (ENSCVAG00000000867) taldo1 (ENSCVAG00000019420) ENSCVAG00000019386 CRABP1 (ENSCVAG00000019308) Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015017770 CHIC2 (ENSNFUG00015017775) fip1l1b (ENSNFUG00015017783) kitb (ENSNFUG00015017809) CLOCK (ENSNFUG00015018138) exoc1l (ENSNFUG00015020090) smc2 (ENSNFUG00015020117) tmem175 (ENSNFUG00015020537) ENSNFUG00015020540 kdm4c (ENSNFUG00015020558) ENSNFUG00015021289 ENSNFUG00015023368 ENSNFUG00015023376 TYRP1 (ENSNFUG00015023384) ENSNFUG00015023395 ADGRL3 (ENSNFUG00015023415) #22 ENSNFUG00015023623 ENSNFUG00015023624 ENSNFUG00015023628 CRMP1 (ENSNFUG00015023700) WFS1 (ENSNFUG00015006757) ppp2r2ca (ENSNFUG00015006762) hpf1 (ENSNFUG00015006771) ENSNFUG00015006777 ENSNFUG00015006794 ENSNFUG00015007041 camk2d2 (ENSNFUG00015007058) ENSNFUG00015007149 ENSNFUG00015007153 ENSNFUG00015007172 ENSNFUG00015007233 Mangrove rivulus MODERN SPECIES 86 slc34a2a (ENSKMAG00000021916) ENSKMAG00000021926 ENSKMAG00000021929 chic2 (ENSKMAG00000021934) fip1l1b (ENSKMAG00000021938) kitb (ENSKMAG00000021945) clockb (ENSKMAG00000021952) exoc1l (ENSKMAG00000021957) smc2 (ENSKMAG00000021962) ecpas (ENSKMAG00000021979) ENSKMAG00000021994 ENSKMAG00000022021 TYRP1 (ENSKMAG00000000177) ENSKMAG00000000249 ENSKMAG00000000275 ADGRL3 (ENSKMAG00000000299) #22 gtf2e2 (ENSKMAG00000000332) smim18 (ENSKMAG00000000378) DCTN6 (ENSKMAG00000000386) HGSNAT (ENSKMAG00000000428) rbpja (ENSKMAG00000000445) ENSKMAG00000000490 ENSKMAG00000000501 ENSKMAG00000000514 ENSKMAG00000000524 crmp1 (ENSKMAG00000000535) ENSKMAG00000000620 WFS1 (ENSKMAG00000000636) ppp2r2ca (ENSKMAG00000000648) Oryzias ANCESTRAL SPECIES 15 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Oryzias_b ANCESTRAL SPECIES 29 ENSGT00930000151058 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Javanese ricefish MODERN SPECIES ENSOJAG00000018011 ENSOJAG00000018000 slc34a2a (ENSOJAG00000017277) ENSOJAG00000017176 ENSOJAG00000017140 chic2 (ENSOJAG00000017109) fip1l1b (ENSOJAG00000017102) kitb (ENSOJAG00000016645) clockb (ENSOJAG00000016253) exoc1l (ENSOJAG00000016206) smc2 (ENSOJAG00000015443) kdm4c (ENSOJAG00000013891) ENSOJAG00000008199 TYRP1 (ENSOJAG00000007953) ENSOJAG00000007820 ADGRL3 (ENSOJAG00000004774) #22 smim18 (ENSOJAG00000004223) gtf2e2 (ENSOJAG00000004072) DCTN6 (ENSOJAG00000003897) HGSNAT (ENSOJAG00000003456) rbpja (ENSOJAG00000003267) STIM2 (ENSOJAG00000003027) ENSOJAG00000002956 ENSOJAG00000002948 crmp1 (ENSOJAG00000002315) WFS1 (ENSOJAG00000002110) ppp2r2ca (ENSOJAG00000002089) ENSOJAG00000002069 hpf1 (ENSOJAG00000002044) ENSOJAG00000001074 camk2d2 (ENSOJAG00000000420) Indian medaka MODERN SPECIES 21 slc34a2a (ENSOMEG00000015839) ENSOMEG00000015811 ENSOMEG00000015790 chic2 (ENSOMEG00000015778) fip1l1b (ENSOMEG00000015730) kitb (ENSOMEG00000015661) clockb (ENSOMEG00000015412) exoc1l (ENSOMEG00000000377) smc2 (ENSOMEG00000014982) ecpas (ENSOMEG00000014908) ENSOMEG00000001027 ENSOMEG00000014791 ENSOMEG00000014764 TYRP1 (ENSOMEG00000014715) ENSOMEG00000014698 ADGRL3 (ENSOMEG00000014640) #22 gtf2e2 (ENSOMEG00000014610) smim18 (ENSOMEG00000014593) DCTN6 (ENSOMEG00000014586) ENSOMEG00000014565 rbpja (ENSOMEG00000014525) ENSOMEG00000014488 ENSOMEG00000014461 crmp1 (ENSOMEG00000014427) WFS1 (ENSOMEG00000014371) ppp2r2ca (ENSOMEG00000014344) ENSOMEG00000014313 hpf1 (ENSOMEG00000014263) ENSOMEG00000014166 ENSOMEG00000014138 ENSOMEG00000014101 Oryzias_a ANCESTRAL SPECIES 23 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000155626 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Chinese medaka MODERN SPECIES 272 ENSOSIG00000021647 ENSOSIG00000021643 slc34a2a (ENSOSIG00000021485) ENSOSIG00000021466 ENSOSIG00000021465 chic2 (ENSOSIG00000021464) fip1l1b (ENSOSIG00000021461) kitb (ENSOSIG00000021456) clockb (ENSOSIG00000021261) exoc1l (ENSOSIG00000021194) smc2 (ENSOSIG00000021184) ENSOSIG00000021167 ENSOSIG00000001740 TYRP1 (ENSOSIG00000000687) ENSOSIG00000000668 ENSOSIG00000000656 #22 smim18 (ENSOSIG00000000650) gtf2e2 (ENSOSIG00000000648) DCTN6 (ENSOSIG00000000644) ENSOSIG00000000637 rbpja (ENSOSIG00000000585) STIM2 (ENSOSIG00000000579) Japanese Medaka HdrR MODERN SPECIES slc34a2a (ENSORLG00000004331) ENSORLG00000027533 ENSORLG00000004352 ENSORLG00000025729 chic2 (ENSORLG00000004366) fip1l1b (ENSORLG00000004397) kitb (ENSORLG00000004401) clockb (ENSORLG00000004495) exoc1l (ENSORLG00000027626) smc2 (ENSORLG00000004556) ecpas (ENSORLG00000004593) kdm4c (ENSORLG00000004619) ENSORLG00000004685 ENSORLG00000004723 ENSORLG00000004753 ENSORLG00000004792 #22 ENSORLG00000004806 gtf2e2 (ENSORLG00000004825) smim18 (ENSORLG00000023687) DCTN6 (ENSORLG00000004837) ENSORLG00000004882 ENSORLG00000004897 ENSORLG00000029705 ENSORLG00000028789 ENSORLG00000026446 ENSORLG00000023677 ENSORLG00000004916 crmp1 (ENSORLG00000027778) WFS1 (ENSORLG00000004929) ppp2r2ca (ENSORLG00000004957) ENSORLG00000029779 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g Eupercaria ANCESTRAL SPECIES 2 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Tetraodontidae ANCESTRAL SPECIES 267 ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00390000017890.b.a Fugu DUPLICATION Fugu MODERN SPECIES 8 ADRA1D (ENSTRUG00000002804) ENSTRUG00000031420 ctnna2 (ENSTRUG00000002863) ENSTRUG00000020187 LRRTM1 (ENSTRUG00000004494) ENSTRUG00000033430 ENSTRUG00000032775 ENSTRUG00000023192 ENSTRUG00000031293 ENSTRUG00000032245 ENSTRUG00000027425 ENSTRUG00000027160 suclg1 (ENSTRUG00000000638) patl1 (ENSTRUG00000000709) ENSTRUG00000030942 ENSTRUG00000028691 #22 gtf2e2 (ENSTRUG00000028017) ENSTRUG00000004797 ENSTRUG00000033337 jupa (ENSTRUG00000000583) ENSTRUG00000003718 ENSTRUG00000031532 STIM2 (ENSTRUG00000000799) gtf2e2 (ENSTRUG00000004948) ENSTRUG00000026927 ENSTRUG00000030929 #22 SLC29A1 (ENSTRUG00000028910) ENSTRUG00000022752 ENSTRUG00000028655 SOS1 (ENSTRUG00000013953) rcor3 (ENSTRUG00000013835) Fugu MODERN SPECIES 8 AARS2 (ENSTRUG00000013248) ENSTRUG00000013378 opn6a (ENSTRUG00000013409) slc8a1a (ENSTRUG00000013535) MAL (ENSTRUG00000013673) pgap4 (ENSTRUG00000013719) tpcn3 (ENSTRUG00000013729) ENSTRUG00000013764 ENSTRUG00000032383 ENSTRUG00000013794 rcor3 (ENSTRUG00000013835) SOS1 (ENSTRUG00000013953) ENSTRUG00000028655 ENSTRUG00000022752 SLC29A1 (ENSTRUG00000028910) ENSTRUG00000030929 #22 ENSTRUG00000026927 gtf2e2 (ENSTRUG00000004948) STIM2 (ENSTRUG00000000799) ENSTRUG00000031532 ENSTRUG00000003718 jupa (ENSTRUG00000000583) ENSTRUG00000033337 ENSTRUG00000004797 gtf2e2 (ENSTRUG00000028017) ENSTRUG00000028691 #22 ENSTRUG00000030942 patl1 (ENSTRUG00000000709) suclg1 (ENSTRUG00000000638) ENSTRUG00000027160 ENSTRUG00000027425 Tetraodon MODERN SPECIES 10 slc25a10b (ENSTNIG00000005688) slc25a10b (ENSTNIG00000004108) ENSTNIG00000004107 chic2 (ENSTNIG00000004106) ENSTNIG00000004105 fip1l1b (ENSTNIG00000004104) kitb (ENSTNIG00000004103) clockb (ENSTNIG00000004102) smc2 (ENSTNIG00000004101) ecpas (ENSTNIG00000004100) kdm4c (ENSTNIG00000004099) ENSTNIG00000004098 ENSTNIG00000001593 ENSTNIG00000004617 asah2 (ENSTNIG00000004618) ADGRL3 (ENSTNIG00000005139) #22 gtf2e2 (ENSTNIG00000005140) DCTN6 (ENSTNIG00000005141) ENSTNIG00000019603 ENSTNIG00000018675 ENSTNIG00000000969 vps8 (ENSTNIG00000005465) FAM98A (ENSTNIG00000005464) ENSTNIG00000005463 ENSTNIG00000005961 cyp17a1 (ENSTNIG00000019678) ENSTNIG00000004434 RNF166 (ENSTNIG00000004433) wbp1la (ENSTNIG00000005241) fbxw4 (ENSTNIG00000005242) fgf8a (ENSTNIG00000006362) Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Ballan wrasse MODERN SPECIES 240 ENSLBEG00000028822 ENSLBEG00000028820 fip1l1b (ENSLBEG00000028819) kitb (ENSLBEG00000028818) ENSLBEG00000028813 exoc1l (ENSLBEG00000028809) smc2 (ENSLBEG00000028807) ecpas (ENSLBEG00000028805) kdm4c (ENSLBEG00000028803) ENSLBEG00000028801 TYRP1 (ENSLBEG00000028800) ENSLBEG00000028798 ENSLBEG00000028797 ENSLBEG00000028794 #22 smim18 (ENSLBEG00000028792) gtf2e2 (ENSLBEG00000028790) DCTN6 (ENSLBEG00000028789) ENSLBEG00000028788 rbpja (ENSLBEG00000028786) STIM2 (ENSLBEG00000028785) ENSLBEG00000028784 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Perciformes ANCESTRAL SPECIES 2 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT01060000248860 ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Perciformes_a ANCESTRAL SPECIES ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Channel bull blenny MODERN SPECIES slc34a2a (ENSCGOG00000019249) ENSCGOG00000019247 ENSCGOG00000019243 chic2 (ENSCGOG00000019241) fip1l1b (ENSCGOG00000019240) kitb (ENSCGOG00000017978) clockb (ENSCGOG00000017276) exoc1l (ENSCGOG00000017250) ENSCGOG00000017249 smc2 (ENSCGOG00000016701) ecpas (ENSCGOG00000016277) ENSCGOG00000016252 ENSCGOG00000003397 TYRP1 (ENSCGOG00000003047) ENSCGOG00000003030 ADGRL3 (ENSCGOG00000001017) #22 smim18 (ENSCGOG00000000954) gtf2e2 (ENSCGOG00000000950) DCTN6 (ENSCGOG00000000927) ENSCGOG00000000921 rbpja (ENSCGOG00000000823) STIM2 (ENSCGOG00000000558) ENSCGOG00000000437 crmp1 (ENSCGOG00000000289) WFS1 (ENSCGOG00000000176) ppp2r2ca (ENSCGOG00000000122) ENSCGOG00000000076 hpf1 (ENSCGOG00000023505) ENSCGOG00000021379 camk2d2 (ENSCGOG00000016254) ENSCGOG00000016095 Pike perch MODERN SPECIES 69 slc34a2a (ENSSLUG00000014608) ENSSLUG00000014587 ENSSLUG00000014581 chic2 (ENSSLUG00000014570) ENSSLUG00000014549 kitb (ENSSLUG00000014388) clockb (ENSSLUG00000011054) exoc1l (ENSSLUG00000010916) smc2 (ENSSLUG00000010884) ecpas (ENSSLUG00000008642) kdm4c (ENSSLUG00000008356) ENSSLUG00000025842 TYRP1 (ENSSLUG00000025429) hnrnpd (ENSSLUG00000025425) ENSSLUG00000025422 ENSSLUG00000025416 #22 ENSSLUG00000025413 ENSSLUG00000025412 smim18 (ENSSLUG00000025410) gtf2e2 (ENSSLUG00000025406) DCTN6 (ENSSLUG00000025399) HGSNAT (ENSSLUG00000025391) rbpja (ENSSLUG00000025378) STIM2 (ENSSLUG00000025345) ENSSLUG00000025328 crmp1 (ENSSLUG00000025211) WFS1 (ENSSLUG00000025185) ppp2r2ca (ENSSLUG00000025184) ENSSLUG00000025180 hpf1 (ENSSLUG00000025177) ENSSLUG00000025165 Cottioidei ANCESTRAL SPECIES 3 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT01060000248860 ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Lumpfish MODERN SPECIES ENSCLMG00005002621 slc34a2a (ENSCLMG00005002620) ENSCLMG00005002618 ENSCLMG00005002617 chic2 (ENSCLMG00005002615) ENSCLMG00005002613 ENSCLMG00005002611 clockb (ENSCLMG00005002021) exoc1l (ENSCLMG00005002002) smc2 (ENSCLMG00005001997) ecpas (ENSCLMG00005001275) kdm4c (ENSCLMG00005001264) ENSCLMG00005000943 TYRP1 (ENSCLMG00005000925) ENSCLMG00005000921 ADGRL3 (ENSCLMG00005000920) #22 smim18 (ENSCLMG00005000919) gtf2e2 (ENSCLMG00005000918) DCTN6 (ENSCLMG00005000917) HGSNAT (ENSCLMG00005000902) rbpja (ENSCLMG00005000865) ENSCLMG00005000859 ENSCLMG00005000858 crmp1 (ENSCLMG00005000855) WFS1 (ENSCLMG00005000842) ppp2r2ca (ENSCLMG00005000837) hpf1 (ENSCLMG00005000835) ENSCLMG00005000823 ENSCLMG00005000820 camk2d2 (ENSCLMG00005000488) ENSCLMG00005000452 Stickleback MODERN SPECIES 4 ENSGACG00000015962 ENSGACG00000015960 slc34a2a (ENSGACG00000015959) ENSGACG00000015951 chic2 (ENSGACG00000015950) ENSGACG00000015947 fip1l1b (ENSGACG00000015946) kitb (ENSGACG00000015944) clockb (ENSGACG00000015939) smc2 (ENSGACG00000015927) ecpas (ENSGACG00000015925) kdm4c (ENSGACG00000015922) ENSGACG00000015921 TYRP1 (ENSGACG00000015912) ENSGACG00000015905 ENSGACG00000015904 #22 ENSGACG00000015901 smim18 (ENSGACG00000015899) gtf2e2 (ENSGACG00000015893) DCTN6 (ENSGACG00000015891) HGSNAT (ENSGACG00000015890) rbpja (ENSGACG00000015888) Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Gilthead seabream MODERN SPECIES slc34a2a (ENSSAUG00010025097) ENSSAUG00010025088 ENSSAUG00010025087 chic2 (ENSSAUG00010025084) fip1l1b (ENSSAUG00010025079) kitb (ENSSAUG00010025076) clockb (ENSSAUG00010025019) ENSSAUG00010025005 exoc1l (ENSSAUG00010025004) smc2 (ENSSAUG00010024993) ecpas (ENSSAUG00010024842) kdm4c (ENSSAUG00010024690) ENSSAUG00010023740 TYRP1 (ENSSAUG00010023675) ENSSAUG00010023668 ADGRL3 (ENSSAUG00010021014) #22 smim18 (ENSSAUG00010020991) gtf2e2 (ENSSAUG00010020988) DCTN6 (ENSSAUG00010020983) ENSSAUG00010020981 rbpja (ENSSAUG00010020951) STIM2 (ENSSAUG00010020885) ENSSAUG00010020883 ENSSAUG00010020881 ENSSAUG00010020880 ENSSAUG00010020879 crmp1 (ENSSAUG00010020754) WFS1 (ENSSAUG00010020749) ppp2r2ca (ENSSAUG00010020748) ENSSAUG00010020746 hpf1 (ENSSAUG00010020745) Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b European seabass MODERN SPECIES 20 ENSDLAG00005012194 ENSDLAG00005012199 ENSDLAG00005035094 ENSDLAG00005012323 ENSDLAG00005012338 ENSDLAG00005012563 ENSDLAG00005012617 ENSDLAG00005013892 exoc1l (ENSDLAG00005014437) smc2 (ENSDLAG00005014443) ENSDLAG00005014517 ENSDLAG00005015624 ENSDLAG00005015926 ENSDLAG00005022973 ENSDLAG00005022999 ENSDLAG00005023107 #22 ENSDLAG00005024835 SMIM18 (ENSDLAG00005024842) ENSDLAG00005030887 ENSDLAG00005024854 rbpja (ENSDLAG00005024887) ENSDLAG00005024913 ENSDLAG00005024916 crmp1 (ENSDLAG00005024927) WFS1 (ENSDLAG00005029500) ppp2r2ca (ENSDLAG00005031161) ENSDLAG00005025024 hpf1 (ENSDLAG00005025041) ENSDLAG00005025100 camk2d2 (ENSDLAG00005032299) ENSDLAG00005014206 Large yellow croaker MODERN SPECIES 481 ENSLCRG00005010643 slc34a2a (ENSLCRG00005010665) ENSLCRG00005012486 ENSLCRG00005012487 ENSLCRG00005012491 chic2 (ENSLCRG00005012496) kitb (ENSLCRG00005012510) clockb (ENSLCRG00005012516) exoc1l (ENSLCRG00005012561) smc2 (ENSLCRG00005012562) ecpas (ENSLCRG00005012572) kdm4c (ENSLCRG00005012860) ENSLCRG00005012949 TYRP1 (ENSLCRG00005014121) ENSLCRG00005014151 ADGRL3 (ENSLCRG00005014203) #22 gtf2e2 (ENSLCRG00005017199) smim18 (ENSLCRG00005017201) ENSLCRG00005017204 ENSLCRG00005017247 rbpja (ENSLCRG00005017286) STIM2 (ENSLCRG00005017288) ENSLCRG00005017291 ENSLCRG00005017292 crmp1 (ENSLCRG00005017311) WFS1 (ENSLCRG00005020444) ppp2r2ca (ENSLCRG00005020446) ENSLCRG00005020451 hpf1 (ENSLCRG00005020456) ENSLCRG00005020483 camk2d2 (ENSLCRG00005022490) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Anabantaria ANCESTRAL SPECIES 1 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Anabantoidei ANCESTRAL SPECIES ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Climbing perch MODERN SPECIES ENSATEG00000021927 ENSATEG00000021816 ENSATEG00000029554 ENSATEG00000021789 ENSATEG00000015358 ENSATEG00000021757 ENSATEG00000021737 ENSATEG00000021687 exoc1l (ENSATEG00000021675) ENSATEG00000021647 ENSATEG00000021558 ENSATEG00000021528 ENSATEG00000021335 ENSATEG00000021292 ENSATEG00000029001 ENSATEG00000021184 #22 SMIM18 (ENSATEG00000021153) GTF2E2 (ENSATEG00000021140) DCTN6 (ENSATEG00000021125) ENSATEG00000021103 rbpja (ENSATEG00000021086) ENSATEG00000020936 ENSATEG00000020897 crmp1 (ENSATEG00000020872) WFS1 (ENSATEG00000020851) ppp2r2ca (ENSATEG00000020822) hpf1 (ENSATEG00000020795) ENSATEG00000020709 camk2d2 (ENSATEG00000020671) ENSATEG00000020661 CXCL8 (ENSATEG00000028656) Siamese fighting fish MODERN SPECIES slc34a2a (ENSBSLG00000011907) ENSBSLG00000012241 ENSBSLG00000012256 ENSBSLG00000012267 chic2 (ENSBSLG00000012275) fip1l1b (ENSBSLG00000012315) kitb (ENSBSLG00000012404) clockb (ENSBSLG00000012519) exoc1l (ENSBSLG00000012657) smc2 (ENSBSLG00000012664) ecpas (ENSBSLG00000012695) kdm4c (ENSBSLG00000012714) ENSBSLG00000012935 TYRP1 (ENSBSLG00000020744) ENSBSLG00000020767 ENSBSLG00000020834 #22 gtf2e2 (ENSBSLG00000022545) smim18 (ENSBSLG00000022561) DCTN6 (ENSBSLG00000022566) HGSNAT (ENSBSLG00000022618) rbpja (ENSBSLG00000022652) ENSBSLG00000022659 ENSBSLG00000022796 crmp1 (ENSBSLG00000022943) WFS1 (ENSBSLG00000023569) ppp2r2ca (ENSBSLG00000023578) ENSBSLG00000023594 hpf1 (ENSBSLG00000023652) ENSBSLG00000023696 camk2d2 (ENSBSLG00000024485) ENSBSLG00000024701 Zig-zag eel MODERN SPECIES ENSMAMG00000004468 ENSMAMG00000004490 ENSMAMG00000004513 ENSMAMG00000004535 ENSMAMG00000004554 ENSMAMG00000004644 exoc1l (ENSMAMG00000004786) smc2 (ENSMAMG00000004805) ENSMAMG00000004883 ENSMAMG00000005013 ENSMAMG00000005038 ENSMAMG00000005115 ENSMAMG00000005141 ENSMAMG00000005154 ENSMAMG00000005191 ENSMAMG00000005211 #22 ENSMAMG00000000644 ENSMAMG00000024593 Carangaria ANCESTRAL SPECIES ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Carangaria_A ANCESTRAL SPECIES 14 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Seriola ANCESTRAL SPECIES 29 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Greater amberjack MODERN SPECIES 102 ENSSDUG00000004198 ENSSDUG00000004186 chic2 (ENSSDUG00000004156) fip1l1b (ENSSDUG00000004117) kitb (ENSSDUG00000004094) clockb (ENSSDUG00000004057) exoc1l (ENSSDUG00000004042) smc2 (ENSSDUG00000003986) ecpas (ENSSDUG00000003877) ENSSDUG00000003831 ENSSDUG00000003819 ENSSDUG00000003802 ENSSDUG00000003734 TYRP1 (ENSSDUG00000003709) ENSSDUG00000003680 ADGRL3 (ENSSDUG00000003616) #22 ENSSDUG00000003605 smim18 (ENSSDUG00000003601) gtf2e2 (ENSSDUG00000003582) DCTN6 (ENSSDUG00000003551) ENSSDUG00000003524 rbpja (ENSSDUG00000003478) STIM2 (ENSSDUG00000003300) Yellowtail amberjack MODERN SPECIES 2982 ENSSLDG00000024057 ENSSLDG00000024066 chic2 (ENSSLDG00000024079) fip1l1b (ENSSLDG00000024099) kitb (ENSSLDG00000024132) ENSSLDG00000024209 exoc1l (ENSSLDG00000024231) smc2 (ENSSLDG00000024240) ecpas (ENSSLDG00000024289) kdm4c (ENSSLDG00000024407) ENSSLDG00000024480 ENSSLDG00000024512 ENSSLDG00000024546 TYRP1 (ENSSLDG00000024554) ENSSLDG00000024571 ADGRL3 (ENSSLDG00000024579) #22 ENSSLDG00000024602 gtf2e2 (ENSSLDG00000024609) smim18 (ENSSLDG00000024621) DCTN6 (ENSSLDG00000024624) ENSSLDG00000024640 rbpja (ENSSLDG00000024657) STIM2 (ENSSLDG00000024677) ENSSLDG00000024689 ENSSLDG00000024695 crmp1 (ENSSLDG00000024703) WFS1 (ENSSLDG00000024747) ppp2r2ca (ENSSLDG00000024757) ENSSLDG00000024772 ENSSLDG00000024778 hpf1 (ENSSLDG00000024781) Barramundi perch MODERN SPECIES 237 fip1l1b (ENSLCAG00010027597) kitb (ENSLCAG00010027617) clockb (ENSLCAG00010027638) exoc1l (ENSLCAG00010027647) smc2 (ENSLCAG00010027653) ecpas (ENSLCAG00010027680) kdm4c (ENSLCAG00010027698) ENSLCAG00010027801 TYRP1 (ENSLCAG00010028014) ENSLCAG00010028016 ADGRL3 (ENSLCAG00010028018) #22 gtf2e2 (ENSLCAG00010028020) smim18 (ENSLCAG00010028021) ENSLCAG00010028022 HGSNAT (ENSLCAG00010028023) rbpja (ENSLCAG00010028024) STIM2 (ENSLCAG00010028025) ENSLCAG00010028026 ENSLCAG00010028027 ENSLCAG00010028028 ENSLCAG00010028029 crmp1 (ENSLCAG00010028030) WFS1 (ENSLCAG00010028032) ppp2r2ca (ENSLCAG00010028033) ENSLCAG00010028034 hpf1 (ENSLCAG00010028035) Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Turbot MODERN SPECIES 20 ENSSMAG00000013628 ENSSMAG00000013593 ENSSMAG00000013587 ENSSMAG00000013580 ENSSMAG00000013553 ENSSMAG00000013444 ENSSMAG00000013415 ENSSMAG00000013284 exoc1l (ENSSMAG00000037823) ENSSMAG00000013228 ENSSMAG00000013083 ENSSMAG00000012984 ENSSMAG00000012743 ENSSMAG00000012712 ENSSMAG00000012539 ENSSMAG00000012386 #22 SMIM18 (ENSSMAG00000012371) GTF2E2 (ENSSMAG00000012351) DCTN6 (ENSSMAG00000012302) ENSSMAG00000012281 rbpja (ENSSMAG00000012195) ENSSMAG00000012189 ENSSMAG00000024259 ENSSMAG00000027615 crmp1 (ENSSMAG00000012069) WFS1 (ENSSMAG00000034750) ppp2r2ca (ENSSMAG00000012018) ENSSMAG00000012004 hpf1 (ENSSMAG00000011981) ENSSMAG00000027862 ENSSMAG00000011868 Tongue sole MODERN SPECIES 19 serhl (ENSCSEG00000006642) ENSCSEG00000006626 mb (ENSCSEG00000006616) ENSCSEG00000006609 zgc:158803 (ENSCSEG00000006601) fip1l1b (ENSCSEG00000006583) kitb (ENSCSEG00000006569) clockb (ENSCSEG00000006544) exoc1l (ENSCSEG00000006537) smc2 (ENSCSEG00000006524) ecpas (ENSCSEG00000006470) kdm4c (ENSCSEG00000006423) ENSCSEG00000006286 TYRP1 (ENSCSEG00000006262) ENSCSEG00000006192 ADGRL3 (ENSCSEG00000006125) #22 smim18 (ENSCSEG00000006118) gtf2e2 (ENSCSEG00000006111) DCTN6 (ENSCSEG00000006103) ENSCSEG00000006097 rbpja (ENSCSEG00000006030) STIM2 (ENSCSEG00000006014) ENSCSEG00000005997 crmp1 (ENSCSEG00000005981) WFS1 (ENSCSEG00000005973) ppp2r2ca (ENSCSEG00000005966) hpf1 (ENSCSEG00000005962) ANK2 (ENSCSEG00000005938) camk2d2 (ENSCSEG00000005184) ENSCSEG00000005131 FBXO10 (ENSCSEG00000005128) Otomorpha ANCESTRAL SPECIES 590 ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 Clupeiformes ANCESTRAL SPECIES 161 ENSGT00390000001577 ENSGT00940000162414 ENSGT00940000158402 ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00940000159617.c ENSGT00390000011749 ENSGT00410000029064 ENSGT00950000182936.a.a.b.a ENSGT00390000016644 ENSGT00390000017709 ENSGT00940000154986.b ENSGT00940000177316 ENSGT01080000257488 ENSGT00940000156323.c.a ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b.a.b Atlantic herring MODERN SPECIES 14 dnajb14 (ENSCHAG00000027840) TTC39B (ENSCHAG00000027842) snapc3 (ENSCHAG00000027847) psip1a (ENSCHAG00000027848) bnc2 (ENSCHAG00000027849) CNTLN (ENSCHAG00000002484) ENSCHAG00000002619 ENSCHAG00000002796 ENSCHAG00000002892 trmo (ENSCHAG00000003426) anp32b (ENSCHAG00000003481) coro2aa (ENSCHAG00000003554) slit2 (ENSCHAG00000004923) ENSCHAG00000013578 ENSCHAG00000013715 ENSCHAG00000013784 #22 ENSCHAG00000016781 DCTN6 (ENSCHAG00000016796) RBPMS (ENSCHAG00000016837) gtf2e2 (ENSCHAG00000016838) smim18 (ENSCHAG00000016942) FHIP1A (ENSCHAG00000016952) gatb (ENSCHAG00000016979) dctpp1 (ENSCHAG00000017533) ENSCHAG00000017552 FBXW7 (ENSCHAG00000017560) ENSCHAG00000018069 tmem154 (ENSCHAG00000018096) TLR2 (ENSCHAG00000018108) TMEM131L (ENSCHAG00000018111) mnd1 (ENSCHAG00000018130) Denticle herring MODERN SPECIES 14 sh3gl2a (ENSDCDG00000010885) ENSDCDG00000010875 trmo (ENSDCDG00000010846) anp32b (ENSDCDG00000010827) coro2aa (ENSDCDG00000009914) hadh (ENSDCDG00000009873) cyp2u1 (ENSDCDG00000025568) ncapg (ENSDCDG00000025503) ENSDCDG00000025476 slit2 (ENSDCDG00000015357) ENSDCDG00000014993 ENSDCDG00000014992 ENSDCDG00000014990 ENSDCDG00000014989 ENSDCDG00000014987 ENSDCDG00000012784 #22 ENSDCDG00000012718 ##22 ENSDCDG00000012716 smim18 (ENSDCDG00000012713) gtf2e2 (ENSDCDG00000012709) FHIP1A (ENSDCDG00000012706) dctpp1 (ENSDCDG00000012705) gatb (ENSDCDG00000012096) ENSDCDG00000012049 FBXW7 (ENSDCDG00000010161) tmem154 (ENSDCDG00000010085) TMEM131L (ENSDCDG00000010061) mnd1 (ENSDCDG00000010031) trim2a (ENSDCDG00000008767) FHDC1 (ENSDCDG00000008683) arfip1 (ENSDCDG00000008645) Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES 257 ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A ENSGT00940000155527.j.b.a #22 ENSGT00990000203806.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a Characiphysae ANCESTRAL SPECIES 126 ENSGT00940000157846.c ENSGT00390000011433.s.a ENSGT00390000007723 ENSGT00530000063603.B ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A ENSGT00940000155527.j.b.a #22 ENSGT00990000203806.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a.o ENSGT00950000183130.A ENSGT00940000165569 ENSGT00940000153617.C.c Channel catfish MODERN SPECIES 21 ecpas (ENSIPUG00000003055) smc2 (ENSIPUG00000003173) exoc1l (ENSIPUG00000003212) GPR75 (ENSIPUG00000003220) Erlec1 (ENSIPUG00000003229) CHRNA9 (ENSIPUG00000003284) Rhoh (ENSIPUG00000003288) n4bp2 (ENSIPUG00000003296) pds5a (ENSIPUG00000003326) Ube2k (ENSIPUG00000003431) smim14 (ENSIPUG00000003455) ugdh (ENSIPUG00000003462) lias (ENSIPUG00000003506) rpl9 (ENSIPUG00000003557) rfc1 (ENSIPUG00000003606) ADGRL3 (ENSIPUG00000003757) #22 ENSIPUG00000003791 gtf2e2 (ENSIPUG00000003793) smim18 (ENSIPUG00000003809) qdprb.1 (ENSIPUG00000003819) LDB2 (ENSIPUG00000003862) tapt1 (ENSIPUG00000003883) prom1b (ENSIPUG00000003916) fgfbp2b (ENSIPUG00000004100) ENSIPUG00000004122 anxa5b (ENSIPUG00000004143) Uchl1 (ENSIPUG00000004303) ENSIPUG00000004378 ENSIPUG00000004391 ENSIPUG00000004404 ENSIPUG00000004434 Characiphysae_b ANCESTRAL SPECIES 131 ENSGT00940000157846.c ENSGT00390000011433.s.a ENSGT00390000007723 ENSGT00530000063603.B ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A ENSGT00940000155527.j.b.a #22 ENSGT00990000203806.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a.o ENSGT00950000183130.A ENSGT00940000165569 ENSGT00940000153617.C.c Electric eel MODERN SPECIES 217 THBS2 (ENSEEEG00000008855) PSME4 (ENSEEEG00000008838) GPR75 (ENSEEEG00000008837) erlec1 (ENSEEEG00000008834) CHRNA9 (ENSEEEG00000008832) rhoh (ENSEEEG00000008831) n4bp2 (ENSEEEG00000008830) pds5a (ENSEEEG00000006970) ube2kb (ENSEEEG00000006896) smim14 (ENSEEEG00000006892) ugdh (ENSEEEG00000006889) lias (ENSEEEG00000006847) rpl9 (ENSEEEG00000006842) rfc1 (ENSEEEG00000006584) ENSEEEG00000006582 ADGRL3 (ENSEEEG00000006456) #22 Characoidei ANCESTRAL SPECIES 155 ENSGT00940000157846.c ENSGT00390000011433.s.a ENSGT00390000007723 ENSGT00530000063603.B ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A.c ENSGT00940000155527.j.b.a #22 ENSGT00990000203806.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a.o ENSGT00950000183130.A ENSGT00940000165569 ENSGT00940000153617.C.d Red-bellied piranha MODERN SPECIES 243 PSME4 (ENSPNAG00000028254) GPR75 (ENSPNAG00000027792) erlec1 (ENSPNAG00000027770) ENSPNAG00000005964 CHRNA9 (ENSPNAG00000027649) rhoh (ENSPNAG00000027615) n4bp2 (ENSPNAG00000027604) pds5a (ENSPNAG00000006831) ube2kb (ENSPNAG00000027487) smim14 (ENSPNAG00000004233) ugdh (ENSPNAG00000027414) lias (ENSPNAG00000027333) rpl9 (ENSPNAG00000027318) rfc1 (ENSPNAG00000027262) ENSPNAG00000027246 ADGRL3 (ENSPNAG00000006104) #22 ENSPNAG00000026718 gtf2e2 (ENSPNAG00000026699) smim18 (ENSPNAG00000026666) qdprb.4 (ENSPNAG00000026656) Mexicana tetra MODERN SPECIES 13 GPR75 (ENSAMXG00000025271) erlec1 (ENSAMXG00000021660) CHRNA9 (ENSAMXG00000021659) rhoh (ENSAMXG00000025269) n4bp2 (ENSAMXG00000021658) pds5a (ENSAMXG00000021657) ube2kb (ENSAMXG00000034571) smim14 (ENSAMXG00000031990) ugdh (ENSAMXG00000021654) lias (ENSAMXG00000018746) rpl9 (ENSAMXG00000041237) rfc1 (ENSAMXG00000021652) ENSAMXG00000038437 ENSAMXG00000037739 ENSAMXG00000040505 ADGRL3 (ENSAMXG00000021645) #22 ENSAMXG00000037417 smim18 (ENSAMXG00000025268) gtf2e2 (ENSAMXG00000021633) qdprb.4 (ENSAMXG00000035389) ldb2b (ENSAMXG00000021629) tapt1b (ENSAMXG00000013101) prom1b (ENSAMXG00000021625) fgfbp2b (ENSAMXG00000021623) ENSAMXG00000021622 ENSAMXG00000037179 PTPRD (ENSAMXG00000021621) ENSAMXG00000035941 ENSAMXG00000035944 TYRP1 (ENSAMXG00000021619) LURAP1L (ENSAMXG00000042695) Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00940000162414.l.b ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000013015 ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A.f ENSGT00940000155527.j.b.a #22 ENSGT00990000203806.a ENSGT00410000029064.c ENSGT00390000011749 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000153820.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00940000158708.a ENSGT00940000158062.f.a ENSGT00940000156892.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 15 ENSGT00940000162414.l.b.b.a ENSGT00390000001577.e ENSGT00530000063669.a.c ENSGT00390000013015.b ENSGT00940000156077.g.b.j ENSGT00940000160078.c ENSGT00940000164462.a ENSGT00940000155155.l ENSGT00670000098059.d.a ENSGT00390000018294.r ENSGT00390000015355.fb.a ENSGT00390000006234.u ENSGT00390000015224.d.i.b ENSGT00730000111066.b ENSGT00940000155586.A.f.b.b ENSGT00940000155527.j.b.a.a #22 ENSGT00990000203806.a ENSGT00940000156077.g.b.i ENSGT00940000160078.d ENSGT00940000164462.b ENSGT00940000155155.k ENSGT00670000098059.d.b ENSGT00390000018294.q ENSGT00390000015355.fb.b ENSGT00390000006234.v ENSGT00390000015224.d.i.a ENSGT00730000111066.a ENSGT00940000155586.A.f.b.a ENSGT00940000155527.j.b.a.b #22 ENSGT00390000011749.n ENSGT00410000029064.c Goldfish MODERN SPECIES 18 nsun3 (ENSCARG00000067299) ENSCARG00000067295 ENSCARG00000067292 ENSCARG00000067276 CHRNA9 (ENSCARG00000067245) rhoh (ENSCARG00000067231) n4bp2 (ENSCARG00000067215) pds5a (ENSCARG00000063506) ube2kb (ENSCARG00000063152) smim14 (ENSCARG00000063129) ugdh (ENSCARG00000063108) lias (ENSCARG00000063079) rpl9 (ENSCARG00000063053) rfc1 (ENSCARG00000062345) ENSCARG00000062117 ADGRL3 (ENSCARG00000054019) #22 SMIM18 (ENSCARG00000053785) gtf2e2 (ENSCARG00000053751) QDPR (ENSCARG00000053337) ldb2b (ENSCARG00000053284) tapt1b (ENSCARG00000052960) prom1b (ENSCARG00000052536) fgfbp2b (ENSCARG00000052451) ENSCARG00000052434 anxa5b (ENSCARG00000050409) uchl1 (ENSCARG00000050215) ENSCARG00000050181 chrna6 (ENSCARG00000050107) chrnb3a (ENSCARG00000050064) ENSCARG00000049956 DNAH6 (ENSCARG00000048724) Cyprininae_a ANCESTRAL SPECIES 48 ENSGT00940000162414.l.b.b.a ENSGT00390000001577.e ENSGT00530000063669.a.c ENSGT00390000013015.b ENSGT00940000156077.g.b.j ENSGT00940000160078.c ENSGT00940000164462.a ENSGT00940000155155.l ENSGT00670000098059.d.a ENSGT00390000018294.r ENSGT00390000015355.fb.a ENSGT00390000006234.u ENSGT00390000015224.d.i.b ENSGT00730000111066.b ENSGT00940000155586.A.f.b.b ENSGT00940000155527.j.b.a.a #22 ENSGT00990000203806.a ENSGT00410000029064.c.a ENSGT00390000011749.m ENSGT00390000000470.m.a.a ENSGT00390000005639.a.a.n.a ENSGT00390000010628.a.a ENSGT00530000063586.b.c.a.c ENSGT00940000154372.a.a.b.d ENSGT00940000154372.a.b.a.e ENSGT00940000155988.c.e ENSGT00940000157306.bb ENSGT00940000158708.a.c ENSGT00940000158062.f.a.b ENSGT00940000156892.b.a ENSGT00940000154617.A.a.a.g Common carp reference MODERN SPECIES 27 fam184b (ENSCCRG00000021314) ENSCCRG00000057613 ENSCCRG00000054891 ENSCCRG00000077705 CHRNA9 (ENSCCRG00000022278) rhoh (ENSCCRG00000080203) n4bp2 (ENSCCRG00000022271) pds5a (ENSCCRG00000021444) smim14 (ENSCCRG00000073429) ube2kb (ENSCCRG00000073522) ugdh (ENSCCRG00000051328) lias (ENSCCRG00000078037) rpl9 (ENSCCRG00000051304) rfc1 (ENSCCRG00000051229) ENSCCRG00000006500 ENSCCRG00000025312 #22 smim18 (ENSCCRG00000064068) gtf2e2 (ENSCCRG00000046595) QDPR (ENSCCRG00000079710) ldb2b (ENSCCRG00000072395) tapt1b (ENSCCRG00000008631) prom1b (ENSCCRG00000008593) fgfbp2b (ENSCCRG00000025013) ENSCCRG00000043514 anxa5b (ENSCCRG00000015853) uchl1 (ENSCCRG00000076852) ENSCCRG00000044241 chrna6 (ENSCCRG00000044235) chrnb3a (ENSCCRG00000023089) ENSCCRG00000023112 ENSCCRG00000023148 Golden-line barbel MODERN SPECIES 345 CHRNA9 (ENSSGRG00000027586) rhoh (ENSSGRG00000027585) n4bp2 (ENSSGRG00000027583) pds5a (ENSSGRG00000022515) ube2kb (ENSSGRG00000022408) smim14 (ENSSGRG00000022406) ENSSGRG00000022405 rpl9 (ENSSGRG00000022403) lias (ENSSGRG00000022029) rfc1 (ENSSGRG00000021184) ENSSGRG00000021177 ENSSGRG00000021046 #22 ENSSGRG00000021045 smim18 (ENSSGRG00000021044) gtf2e2 (ENSSGRG00000021002) QDPR (ENSSGRG00000021001) ldb2b (ENSSGRG00000021000) tapt1b (ENSSGRG00000020999) prom1b (ENSSGRG00000020992) zmynd10 (ENSSGRG00000020990) ENSSGRG00000020989 anxa5b (ENSSGRG00000020348) uchl1 (ENSSGRG00000020340) ENSSGRG00000020270 chrna6 (ENSSGRG00000020268) chrnb3a (ENSSGRG00000020267) ENSSGRG00000020094 Cyprininae ANCESTRAL SPECIES 15 ENSGT00730000111066.b ENSGT00940000155586.A.f.b.b ENSGT00940000155527.j.b.a.a #22 ENSGT00990000203806.a ENSGT00940000156077.g.b.i ENSGT00940000160078.d ENSGT00940000164462.b ENSGT00940000155155.k ENSGT00670000098059.d.b ENSGT00390000018294.q ENSGT00390000015355.fb.b ENSGT00390000006234.v ENSGT00390000015224.d.i.a ENSGT00730000111066.a ENSGT00940000155586.A.f.b.a ENSGT00940000155527.j.b.a.b #22 ENSGT00390000011749.n ENSGT00410000029064.c ENSGT00390000011749.m ENSGT00390000000470.m.a ENSGT00390000005639.a.a.n.a ENSGT00390000010628.a.a ENSGT00530000063586.b.c.a.c ENSGT00940000154372.a.a.b.d ENSGT00940000154372.a.b.a.e ENSGT00940000155988.c.e ENSGT00940000157306.bb ENSGT00940000158708.a.c ENSGT00940000158062.f.a.b ENSGT00940000156892.b.a ENSGT00940000154617.A.a.a.g Goldfish DUPLICATION Goldfish MODERN SPECIES ncapg (ENSCARG00000027836) fam184b (ENSCARG00000027813) ENSCARG00000027805 CHRNA9 (ENSCARG00000027798) rhoh (ENSCARG00000027789) n4bp2 (ENSCARG00000027721) pds5a (ENSCARG00000027541) ube2kb (ENSCARG00000027513) smim14 (ENSCARG00000027501) ugdh (ENSCARG00000027366) lias (ENSCARG00000027319) rpl9 (ENSCARG00000027281) rfc1 (ENSCARG00000024417) ENSCARG00000024272 ENSCARG00000024253 ADGRL3 (ENSCARG00000019085) #22 gtf2e2 (ENSCARG00000018918) QDPR (ENSCARG00000018910) ldb2b (ENSCARG00000018853) tapt1b (ENSCARG00000018629) prom1b (ENSCARG00000017683) zmynd10 (ENSCARG00000017609) fgfbp2b (ENSCARG00000017601) ENSCARG00000017591 anxa5b (ENSCARG00000017462) uchl1 (ENSCARG00000017417) ENSCARG00000017407 chrna3 (ENSCARG00000017362) frg1 (ENSCARG00000017342) asah1b (ENSCARG00000017142) pcm1 (ENSCARG00000013572) Goldfish MODERN SPECIES ENSCARG00000024185 ncapg (ENSCARG00000024093) ENSCARG00000024074 CHRNA9 (ENSCARG00000024028) rhoh (ENSCARG00000024021) n4bp2 (ENSCARG00000023995) pds5a (ENSCARG00000021147) ube2kb (ENSCARG00000020988) smim14 (ENSCARG00000020976) ugdh (ENSCARG00000020905) lias (ENSCARG00000020659) rpl9 (ENSCARG00000020624) rfc1 (ENSCARG00000020175) ENSCARG00000020137 ENSCARG00000062384 ADGRL3 (ENSCARG00000048241) #22 smim18 (ENSCARG00000047638) gtf2e2 (ENSCARG00000047612) QDPR (ENSCARG00000047565) ldb2b (ENSCARG00000047533) ENSCARG00000047525 tapt1b (ENSCARG00000047132) prom1b (ENSCARG00000046930) zmynd10 (ENSCARG00000046852) fgfbp2b (ENSCARG00000046844) ENSCARG00000046842 anxa5b (ENSCARG00000046386) sh3gl2a (ENSCARG00000046301) ENSCARG00000046268 ENSCARG00000046222 coro2aa (ENSCARG00000046092) Cyprininae_a ANCESTRAL SPECIES 138 ENSGT00390000001577.f ENSGT00530000063669.a.d ENSGT00390000013015.a ENSGT00940000156077.g.b.i ENSGT00940000160078.d ENSGT00940000164462.b ENSGT00940000155155.k ENSGT00670000098059.d.b ENSGT00390000018294.q ENSGT00390000015355.fb.b ENSGT00390000006234.v ENSGT00390000015224.d.i.a ENSGT00390000015224.d.j ENSGT00730000111066.a ENSGT00940000155586.A.f.b.a ENSGT00940000155527.j.b.a.b #22 ENSGT00390000011749.n ENSGT00410000029064.c.b ENSGT00390000000470.m.b ENSGT00390000000470.m.a.b ENSGT00390000005639.a.a.n.b ENSGT00390000010628.a.b ENSGT00530000063586.b.c.a.d ENSGT00940000153820.a.c ENSGT00940000154372.a.a.b.c ENSGT00940000154372.a.b.a.f ENSGT00940000155988.c.f ENSGT00940000157306.cb ENSGT00940000158708.a.d ENSGT00940000158062.f.a.a ENSGT00940000156892.b.b Common carp reference MODERN SPECIES 22 ENSCCRG00000076387 ncapg (ENSCCRG00000021321) fam184b (ENSCCRG00000065912) ENSCCRG00000021307 CHRNA9 (ENSCCRG00000021301) rhoh (ENSCCRG00000078870) n4bp2 (ENSCCRG00000021294) pds5a (ENSCCRG00000000702) ube2kb (ENSCCRG00000071163) smim14 (ENSCCRG00000076776) ugdh (ENSCCRG00000078816) lias (ENSCCRG00000068790) rpl9 (ENSCCRG00000066350) rfc1 (ENSCCRG00000051363) ENSCCRG00000082674 ENSCCRG00000081359 #22 gtf2e2 (ENSCCRG00000025033) QDPR (ENSCCRG00000046614) ldb2b (ENSCCRG00000012670) prom1b (ENSCCRG00000012693) zmynd10 (ENSCCRG00000008038) fgfbp2b (ENSCCRG00000081229) ENSCCRG00000008030 anxa5b (ENSCCRG00000024897) uchl1 (ENSCCRG00000076047) ENSCCRG00000046668 chrna6 (ENSCCRG00000046676) chrnb3a (ENSCCRG00000046691) ENSCCRG00000007351 kdm4c (ENSCCRG00000021612) ENSCCRG00000082535 Golden-line barbel MODERN SPECIES 827 ENSSGRG00000028026 rpl9 (ENSSGRG00000028027) rfc1 (ENSSGRG00000028033) ENSSGRG00000028036 ENSSGRG00000028073 #22 gtf2e2 (ENSSGRG00000029288) smim18 (ENSSGRG00000029289) QDPR (ENSSGRG00000029290) ldb2b (ENSSGRG00000029296) tapt1b (ENSSGRG00000029485) prom1b (ENSSGRG00000029488) zmynd10 (ENSSGRG00000029492) fgfbp2b (ENSSGRG00000029513) ENSSGRG00000029514 anxa5b (ENSSGRG00000029527) uchl1 (ENSSGRG00000031070) ENSSGRG00000031071 chrna6 (ENSSGRG00000031073) chrnb3a (ENSSGRG00000031078) ENSSGRG00000031093 Zebrafish MODERN SPECIES ncapg (ENSDARG00000070109) fam184b (ENSDARG00000055099) ENSDARG00000092290 CHRNA9 (ENSDARG00000054680) rhoh (ENSDARG00000070121) n4bp2 (ENSDARG00000061451) pds5a (ENSDARG00000055022) ube2kb (ENSDARG00000013505) smim14 (ENSDARG00000005799) ugdh (ENSDARG00000019838) lias (ENSDARG00000022845) rpl9 (ENSDARG00000037350) ENSDARG00000116939 rfc1 (ENSDARG00000054799) ENSDARG00000094677 ADGRL3 (ENSDARG00000061121) #22 smim18 (ENSDARG00000093064) gtf2e2 (ENSDARG00000012672) qdprb.1 (ENSDARG00000037378) ENSDARG00000116099 ldb2b (ENSDARG00000034896) tapt1b (ENSDARG00000061143) prom1b (ENSDARG00000034007) zmynd10 (ENSDARG00000002406) fgfbp2b (ENSDARG00000038056) ENSDARG00000091660 anxa5b (ENSDARG00000016470) uchl1 (ENSDARG00000026871) ENSDARG00000115778 chrna6 (ENSDARG00000055559) ENSDARG00000092275 Otophysi ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Goldfish MODERN SPECIES 47 drd4b (ENSCARG00000038266) sirt3 (ENSCARG00000038292) ENSCARG00000038344 ZNF319 (ENSCARG00000038361) csnk2a2a (ENSCARG00000038409) MATCAP1 (ENSCARG00000039132) nqo1 (ENSCARG00000039143) zgc:194679 (ENSCARG00000039163) ENSCARG00000039175 dpep1 (ENSCARG00000039193) sult5a1 (ENSCARG00000039225) ENSCARG00000039244 dhodh (ENSCARG00000039302) ENSCARG00000039427 ENSCARG00000039440 ENSCARG00000039445 #22 ENSCARG00000039467 ENSCARG00000039474 mrpl21 (ENSCARG00000039552) HECTD4 (ENSCARG00000039804) ENSCARG00000044376 ENSCARG00000044435 ENSCARG00000044608 ENSCARG00000044632 ENSCARG00000044646 ENSCARG00000044658 tollip (ENSCARG00000044691) slc35c1 (ENSCARG00000044803) RASGRP2 (ENSCARG00000044820) ENSCARG00000045529 ywhae2 (ENSCARG00000045609) Characiphysae ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Characoidei ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Mexicana tetra MODERN SPECIES 686 ENSAMXG00000029314 ENSAMXG00000042086 #22 Osteoglossiformes ANCESTRAL SPECIES 280 ENSGT00950000182924.A.b.a.b.i ENSGT00950000183054.a.a.a.b ENSGT00950000183027.b.a ENSGT00940000156337.d ENSGT00800000124172.j ENSGT00940000156823.e.h.a ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00530000063790.b.h ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000010434.a ENSGT00940000159570.a ENSGT00950000183001.b.b.a.f ENSGT00940000156391.d ENSGT00940000165038.b Asian bonytongue MODERN SPECIES 7 ADGRA3 (ENSSFOG00015001554) KCNIP4 (ENSSFOG00015001513) sec24d (ENSSFOG00015001430) ENSSFOG00015028177 myoz2b (ENSSFOG00015001358) USP53 (ENSSFOG00015001304) fabp2 (ENSSFOG00015001291) ENSSFOG00015026817 elavl2 (ENSSFOG00015001257) smc2 (ENSSFOG00015001137) ecpas (ENSSFOG00015000926) kdm4c (ENSSFOG00015000814) PTPRD (ENSSFOG00015000700) ENSSFOG00015000683 ENSSFOG00015000612 ADGRL3 (ENSSFOG00015000461) #22 ENSSFOG00015026582 RBPMS (ENSSFOG00015029471) gtf2e2 (ENSSFOG00015000360) smim18 (ENSSFOG00015028589) HGSNAT (ENSSFOG00015000351) pi4k2b (ENSSFOG00015000304) htra3a (ENSSFOG00015029173) ENSSFOG00015000256 ENSSFOG00015000243 GPR78 (ENSSFOG00015000190) CPZ (ENSSFOG00015000173) ENSSFOG00015000153 hmx1 (ENSSFOG00015000124) adra2c (ENSSFOG00015020444) lrpap1 (ENSSFOG00015020423) P. kingsleyae MODERN SPECIES 25 ENSPKIG00000002115 ENSPKIG00000002093 ENSPKIG00000002077 myoz2b (ENSPKIG00000002037) ENSPKIG00000002000 fabp2 (ENSPKIG00000001969) elavl2 (ENSPKIG00000001903) smc2 (ENSPKIG00000001788) ecpas (ENSPKIG00000001522) kdm4c (ENSPKIG00000001363) ENSPKIG00000001316 ENSPKIG00000001262 LURAP1L (ENSPKIG00000001229) ENSPKIG00000001213 ENSPKIG00000001132 ADGRL3 (ENSPKIG00000000771) #22 RBPMS (ENSPKIG00000000535) ENSPKIG00000000504 gtf2e2 (ENSPKIG00000000483) ENSPKIG00000000460 pi4k2b (ENSPKIG00000000425) htra3a (ENSPKIG00000000381) ENSPKIG00000000345 CPZ (ENSPKIG00000000318) ENSPKIG00000000307 adra2c (ENSPKIG00000000297) lrpap1 (ENSPKIG00000000278) DOK7 (ENSPKIG00000000227) rgs12b (ENSPKIG00000000155) htt (ENSPKIG00000000098) grk4 (ENSPKIG00000000049) Osteoglossocephalai ANCESTRAL SPECIES 228 ENSGT00800000124172.i ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000168167 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000010434.a ENSGT00940000159570.a ENSGT00950000183001.b.b.a ENSGT00940000156391.d Clupeocephala ANCESTRAL SPECIES 364 ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000168167 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00950000182886.a.b Otomorpha ANCESTRAL SPECIES 13 ENSGT00530000067688 ENSGT00940000159031 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a Clupeiformes ANCESTRAL SPECIES 370 ENSGT00390000017890.b.b ENSGT00940000159617.d ENSGT00800000124172.i ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a Atlantic herring MODERN SPECIES 9 pop7 (ENSCHAG00000024851) dctn1a (ENSCHAG00000024469) ENSCHAG00000024408 ENSCHAG00000024391 FABP2 (ENSCHAG00000024387) ENSCHAG00000024385 DMRTA1 (ENSCHAG00000024382) ENSCHAG00000024369 ELAVL2 (ENSCHAG00000024234) CAAP1 (ENSCHAG00000024225) PTPRD (ENSCHAG00000022128) ENSCHAG00000022072 TYRP1 (ENSCHAG00000022041) LURAP1L (ENSCHAG00000022033) MPDZ (ENSCHAG00000018153) ADGRL3 (ENSCHAG00000016770) ##22 ENSCHAG00000012496 ENSCHAG00000012178 syt4 (ENSCHAG00000012167) vbp1 (ENSCHAG00000012118) rab39bb (ENSCHAG00000012110) zgc:162171 (ENSCHAG00000012096) ENSCHAG00000011346 zgc:92429 (ENSCHAG00000011286) ENSCHAG00000010906 ENSCHAG00000010868 zgc:109889 (ENSCHAG00000010846) htr2cl1 (ENSCHAG00000010715) ENSCHAG00000010692 tnfsf10l (ENSCHAG00000010677) CLCN5 (ENSCHAG00000007231) Denticle herring MODERN SPECIES GJE1 (ENSDCDG00000015050) txlnbb (ENSDCDG00000015046) DCTN1 (ENSDCDG00000004926) ENSDCDG00000004744 OTOF (ENSDCDG00000004576) metap1 (ENSDCDG00000004459) adh8a (ENSDCDG00000004391) elavl2 (ENSDCDG00000004298) SHPRH (ENSDCDG00000004007) CAAP1 (ENSDCDG00000003981) ENSDCDG00000003979 PTPRD (ENSDCDG00000034628) TYRP1 (ENSDCDG00000034559) LURAP1L (ENSDCDG00000034558) MPDZ (ENSDCDG00000034214) ENSDCDG00000031518 ##22 ENSDCDG00000031443 ENSDCDG00000031441 ENSDCDG00000031359 SLC24A2 (ENSDCDG00000031308) ENSDCDG00000031305 NRXN2 (ENSDCDG00000031126) RASGRP2 (ENSDCDG00000031048) ENSDCDG00000031038 H2AZ1 (ENSDCDG00000031029) DDIT4L (ENSDCDG00000031026) PPP3CA (ENSDCDG00000030774) BANK1 (ENSDCDG00000030753) NFIB (ENSDCDG00000030705) zdhhc21 (ENSDCDG00000030694) plaa (ENSDCDG00000030671) Otophysi ANCESTRAL SPECIES 373 ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806.b ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b Characiphysae ANCESTRAL SPECIES 58 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a ENSGT00940000160483.k.b ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b ENSGT01040000240385.B ENSGT00940000164991.a.a ENSGT00940000160206.e ENSGT00940000161519 ENSGT00940000159445 ENSGT00390000018123.a.b ENSGT01100000263644 ENSGT00390000006970 ENSGT01030000234574.A.b.b ENSGT00950000186357 ENSGT00390000012563 Channel catfish MODERN SPECIES 21 pp1b (ENSIPUG00000011678) rela (ENSIPUG00000011563) zgc:63470 (ENSIPUG00000011545) drap1 (ENSIPUG00000011518) MAP3K11 (ENSIPUG00000011483) ENSIPUG00000011460 ENSIPUG00000011448 ENSIPUG00000011439 NRXN2 (ENSIPUG00000011361) ENSIPUG00000011337 crgm2 (ENSIPUG00000011305) RASGRP2 (ENSIPUG00000011247) SLC29A2 (ENSIPUG00000011209) SLC29A2 (ENSIPUG00000011173) MPDZ (ENSIPUG00000011101) adgrl3 (ENSIPUG00000010583) ##22 ENSIPUG00000010251 hgfac (ENSIPUG00000010221) DOK7 (ENSIPUG00000010189) adra2c (ENSIPUG00000010180) ENSIPUG00000010152 ENSIPUG00000010145 ENSIPUG00000010122 ENSIPUG00000010092 ENSIPUG00000010080 ENSIPUG00000010064 ENSIPUG00000009996 ENSIPUG00000009978 emc4 (ENSIPUG00000009917) lpcat4 (ENSIPUG00000009900) nop10 (ENSIPUG00000009890) Characiphysae_b ANCESTRAL SPECIES 148 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a ENSGT00940000160483.k.b ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b Characoidei ANCESTRAL SPECIES 168 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a ENSGT00940000160483.k.b ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b Red-bellied piranha MODERN SPECIES 51 LURAP1L (ENSPNAG00000014904) ppp1cb (ENSPNAG00000014924) rela (ENSPNAG00000005984) zgc:63470 (ENSPNAG00000014971) drap1 (ENSPNAG00000015008) MAP3K11 (ENSPNAG00000015016) ENSPNAG00000015026 ENSPNAG00000003345 NRXN2 (ENSPNAG00000015184) ENSPNAG00000015200 RASGRP2 (ENSPNAG00000015291) ENSPNAG00000015310 MPDZ (ENSPNAG00000015412) ENSPNAG00000015448 ENSPNAG00000015457 ADGRL3 (ENSPNAG00000015641) ##22 ENSPNAG00000015779 HGFAC (ENSPNAG00000015800) DOK7 (ENSPNAG00000015834) ADRA2C (ENSPNAG00000015848) ENSPNAG00000015957 aptx (ENSPNAG00000015984) SLC44A1 (ENSPNAG00000016046) Mexicana tetra MODERN SPECIES 13 prorsd1 (ENSAMXG00000025264) CCDC88A (ENSAMXG00000020481) PPP4R3C (ENSAMXG00000020618) PNPT1 (ENSAMXG00000042321) ENSAMXG00000020741 ENSAMXG00000036963 ENSAMXG00000039087 ENSAMXG00000031439 ENSAMXG00000031515 ENSAMXG00000025265 ENSAMXG00000040772 ENSAMXG00000041855 RASGRP2 (ENSAMXG00000020940) ENSAMXG00000020980 MPDZ (ENSAMXG00000021159) ADGRL3 (ENSAMXG00000021273) ##22 ENSAMXG00000035435 ENSAMXG00000030987 ENSAMXG00000021540 ENSAMXG00000031940 HGFAC (ENSAMXG00000021594) DOK7 (ENSAMXG00000021597) ADRA2C (ENSAMXG00000025266) ENSAMXG00000042568 ENSAMXG00000031293 SLC24A2 (ENSAMXG00000021601) ltb4r (ENSAMXG00000030787) ltb4r2a (ENSAMXG00000029069) HEATR5B (ENSAMXG00000021607) STRN (ENSAMXG00000021609) ENSAMXG00000033032 Electric eel MODERN SPECIES 1023 ENSEEEG00000011148 ##22 Cyprinoidei ANCESTRAL SPECIES 41 ENSGT00390000013315 ENSGT00390000013104 ENSGT00940000162219.x ENSGT00940000163235.A.a.b ENSGT00940000177923 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000156076.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000157468.a.a.a ENSGT00940000165179.b ENSGT00910000144226 ENSGT00390000005535 ENSGT00940000157089.B ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT01030000234532.B.e.a.a.a.b ENSGT00940000163520.A.a.a.b.q ENSGT00940000166741 ENSGT00940000156397.a.b ENSGT01030000234754 ENSGT00940000167415 ENSGT01040000240385.A.a.b.b ENSGT00940000160527.b ENSGT01030000234592.A.a.a.a.a ENSGT00390000019377.a.a.b ENSGT00390000000230 ENSGT00390000013973.A.b.a.b.d Cyprininae ANCESTRAL SPECIES 290 ENSGT00940000164871.b.e.b.a ENSGT01040000240558.a ENSGT00940000177923 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000156076.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000157468.a.a.a.e ENSGT00940000165179.b.a.b ENSGT00910000144226 ENSGT00390000005535 ENSGT00940000157089.B ENSGT00950000182898.a.a.a.a.a.g.e ENSGT00940000155586.B.f ENSGT00940000156348.B.n ENSGT00940000155586.B.e.a ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a.b ENSGT00390000015386.b.c.a ENSGT01030000234532.B.e.a.a.a.b.a.a ENSGT00940000166741.d ENSGT00940000156397.a.b.c ENSGT01030000234754.a.b ENSGT00940000167415 ENSGT01040000240385.A.a.b.b ENSGT00940000160527.b.a ENSGT01030000234592.A.a.a.a.a.g ENSGT00940000160527.b.b ENSGT01030000234592.A.a.a.a.a.h ENSGT00390000019377.a.a.b.a ENSGT00390000000230.q.b Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 2720 ADGRL3 (ENSCARG00000061453) ##22 Goldfish MODERN SPECIES 3085 ADGRL3 (ENSCARG00000050502) ##22 Goldfish MODERN SPECIES 25 lrp4 (ENSCARG00000026352) psmd9 (ENSCARG00000027725) ywhae2 (ENSCARG00000027749) ENSCARG00000027850 SIPA1 (ENSCARG00000027900) RASGRP2 (ENSCARG00000027971) slc35c1 (ENSCARG00000028088) tollip (ENSCARG00000028096) ENSCARG00000028141 RPH3A (ENSCARG00000028220) ENSCARG00000028369 HECTD4 (ENSCARG00000028420) MAPK8IP1 (ENSCARG00000029315) ENSCARG00000029360 MPDZ (ENSCARG00000029634) ADGRL3 (ENSCARG00000034602) ##22 ENSCARG00000036171 ENSCARG00000036201 DOK7 (ENSCARG00000036310) ENSCARG00000036325 ENSCARG00000036359 ENSCARG00000005828 ENSCARG00000005833 ENSCARG00000005842 ENSCARG00000005848 ENSCARG00000005877 znf219 (ENSCARG00000005924) ENSCARG00000005944 btr12 (ENSCARG00000005961) ENSCARG00000005983 ENSCARG00000006000 Cyprininae_a ANCESTRAL SPECIES 141 ENSGT01030000234532.A.a.a.a.a.a.a.b ENSGT00940000160644.d ENSGT00940000160483.k.b.d ENSGT00390000013315.a.a ENSGT00390000013104.d.b ENSGT00940000157468.a.a.a.f ENSGT00940000165179.b.a.a ENSGT00910000144226 ENSGT00390000005535 ENSGT00940000157089.B ENSGT00950000182898.a.a.a.a.a.g.e ENSGT00950000182898.a.a.a.a.a.g.f ENSGT00940000155586.B.f ENSGT00940000156348.B.n ENSGT00940000155586.B.e.a ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a.b ENSGT00390000015386.b.c.a ENSGT01030000234532.B.e.a.a.a.b.a.a ENSGT00940000166741.d ENSGT00940000156397.a.b.c ENSGT00940000166741.c ENSGT00940000156397.a.b.d ENSGT01030000234754.b ENSGT00940000167415 ENSGT01040000240385.A.a.b.b ENSGT00940000160527.b.a.a ENSGT01030000234592.A.a.a.a.a.h ENSGT00390000019377.a.a.b.a ENSGT00390000000230.q.b Common carp reference DUPLICATION Common carp reference MODERN SPECIES 6 lrp4 (ENSCCRG00000015632) psmd9 (ENSCCRG00000081299) ywhae2 (ENSCCRG00000065575) ENSCCRG00000061648 ENSCCRG00000057719 ENSCCRG00000069042 slc35c1 (ENSCCRG00000066984) tollip (ENSCCRG00000066323) ENSCCRG00000077788 ENSCCRG00000041593 ENSCCRG00000061890 ENSCCRG00000001161 ENSCCRG00000080446 ENSCCRG00000080579 ENSCCRG00000066362 ENSCCRG00000071847 ##22 ENSCCRG00000045044 ENSCCRG00000043098 ENSCCRG00000043081 ENSCCRG00000077346 ENSCCRG00000054764 ENSCCRG00000070638 ENSCCRG00000070480 ENSCCRG00000053835 ENSCCRG00000078771 ENSCCRG00000065302 ENSCCRG00000070796 ENSCCRG00000061270 ENSCCRG00000000045 ENSCCRG00000057271 ENSCCRG00000056594 Common carp reference MODERN SPECIES ywhae2 (ENSCCRG00000061887) ENSCCRG00000003971 ENSCCRG00000040406 ENSCCRG00000075515 slc35c1 (ENSCCRG00000067739) tollip (ENSCCRG00000020513) ENSCCRG00000056257 ENSCCRG00000071859 ENSCCRG00000082617 ENSCCRG00000074248 ENSCCRG00000073285 mrpl21 (ENSCCRG00000000488) ENSCCRG00000061685 ENSCCRG00000063445 ENSCCRG00000081606 ENSCCRG00000080023 ##22 ENSCCRG00000075826 ENSCCRG00000056466 ENSCCRG00000082189 ENSCCRG00000060855 ENSCCRG00000027851 ENSCCRG00000026577 ENSCCRG00000052846 ENSCCRG00000080695 ENSCCRG00000058836 ENSCCRG00000000161 ENSCCRG00000067756 ENSCCRG00000006041 znf219 (ENSCCRG00000077973) btr12 (ENSCCRG00000016884) ENSCCRG00000019395 Golden-line barbel MODERN SPECIES 1047 ENSSGRG00000055312 mrpl21 (ENSSGRG00000055311) MAPK8IP1 (ENSSGRG00000055310) ENSSGRG00000055309 ENSSGRG00000055308 ENSSGRG00000055306 ENSSGRG00000055305 ##22 Zebrafish MODERN SPECIES 22 ENSDARG00000041086 SIPA1 (ENSDARG00000076697) RASGRP2 (ENSDARG00000099092) ENSDARG00000102247 slc35c1 (ENSDARG00000104669) tollip (ENSDARG00000098486) ENSDARG00000099470 ENSDARG00000104914 ENSDARG00000109688 ENSDARG00000105490 ENSDARG00000098989 HECTD4 (ENSDARG00000101079) mrpl21 (ENSDARG00000003846) MAPK8IP1 (ENSDARG00000090326) ENSDARG00000099078 ADGRL3 (ENSDARG00000090624) ##22 ENSDARG00000105714 ENSDARG00000105782 SLC24A2 (ENSDARG00000063158) ENSDARG00000088625 cbln6 (ENSDARG00000035718) cbln8 (ENSDARG00000019294) ENSDARG00000078979 znf219 (ENSDARG00000079738) ENSDARG00000101446 btr12 (ENSDARG00000051809) ENSDARG00000090371 ENSDARG00000051804 ENSDARG00000068065 casq1b (ENSDARG00000018105) PEA15 (ENSDARG00000079771) Euteleosteomorpha ANCESTRAL SPECIES 191 ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000153617.C.e.a ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00950000182886.a.b Acanthomorphata ANCESTRAL SPECIES 174 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Percomorphaceae ANCESTRAL SPECIES 18 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Eupercaria ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Tetraodontidae ANCESTRAL SPECIES 29 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155527.j.a ##22 ENSGT00390000017010 ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00940000156164.b ENSGT00940000159031 ENSGT00940000157122.b.a Fugu MODERN SPECIES 20 lgi2a (ENSTRUG00000006766) ccdc149a (ENSTRUG00000030376) PPARGC1A (ENSTRUG00000007210) ENSTRUG00000033268 gba3 (ENSTRUG00000007509) KCNIP4 (ENSTRUG00000032857) sec24d (ENSTRUG00000008125) SYNPO2 (ENSTRUG00000019819) myoz2a (ENSTRUG00000008669) USP53 (ENSTRUG00000025974) ENSTRUG00000031970 ENSTRUG00000033349 PTPRD (ENSTRUG00000008887) TYRP1 (ENSTRUG00000012615) LURAP1L (ENSTRUG00000020323) ADGRL3 (ENSTRUG00000002392) ##22 CAAP1 (ENSTRUG00000007809) ENSTRUG00000031453 elavl2 (ENSTRUG00000007867) elavl2 (ENSTRUG00000030581) dmrta1 (ENSTRUG00000027628) ENSTRUG00000000040 RBPMS (ENSTRUG00000000041) DCTN6 (ENSTRUG00000000046) SGCZ (ENSTRUG00000027866) ENSTRUG00000000057 mfsd8 (ENSTRUG00000000059) ENSTRUG00000000063 ENSTRUG00000028527 cldnd1a (ENSTRUG00000008926) ENSTRUG00000009026 Tetraodon MODERN SPECIES 26 ENSTNIG00000001248 ENSTNIG00000011327 sepsecs (ENSTNIG00000011326) PPARGC1A (ENSTNIG00000011325) ENSTNIG00000002174 gba3 (ENSTNIG00000002058) KCNIP4 (ENSTNIG00000011324) sec24d (ENSTNIG00000011323) SYNPO2 (ENSTNIG00000011322) myoz2a (ENSTNIG00000011321) USP53 (ENSTNIG00000011320) PTPRD (ENSTNIG00000011319) TYRP1 (ENSTNIG00000011318) LURAP1L (ENSTNIG00000011317) MPDZ (ENSTNIG00000011316) ADGRL3 (ENSTNIG00000011315) ##22 ENSTNIG00000011314 CAAP1 (ENSTNIG00000011313) elavl2 (ENSTNIG00000011312) ENSTNIG00000019442 DMRTA1 (ENSTNIG00000003206) sumo1 (ENSTNIG00000003205) ENSTNIG00000003204 ENSTNIG00000003203 ENSTNIG00000001618 ENSTNIG00000001154 mfsd8 (ENSTNIG00000003770) ENSTNIG00000000641 ENSTNIG00000003769 RREB1 (ENSTNIG00000004962) rmc1 (ENSTNIG00000004963) Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 19 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a European seabass MODERN SPECIES 16 ccdc149a (ENSDLAG00005022379) ENSDLAG00005022394 PPARGC1A (ENSDLAG00005022412) gba3 (ENSDLAG00005022428) ADGRA3 (ENSDLAG00005022440) KCNIP4 (ENSDLAG00005022495) sec24d (ENSDLAG00005022522) SYNPO2 (ENSDLAG00005022711) myoz2a (ENSDLAG00005027006) USP53 (ENSDLAG00005022719) PTPRD (ENSDLAG00005022790) ENSDLAG00005023769 ENSDLAG00005023772 ENSDLAG00005031040 MPDZ (ENSDLAG00005023845) ENSDLAG00005024755 ##22 ENSDLAG00005025425 CAAP1 (ENSDLAG00005006023) ENSDLAG00005028286 ENSDLAG00005006521 DMRTA1 (ENSDLAG00005006574) ENSDLAG00005034801 ENSDLAG00005032693 ENSDLAG00005006622 ENSDLAG00005032432 ENSDLAG00005006708 ENSDLAG00005030123 ENSDLAG00005007130 ENSDLAG00005029452 ENSDLAG00005029964 ENSDLAG00005021021 Large yellow croaker MODERN SPECIES 2 lgi2a (ENSLCRG00005012703) ENSLCRG00005012748 ccdc149a (ENSLCRG00005012752) ENSLCRG00005012824 ADGRA3 (ENSLCRG00005012827) gba3 (ENSLCRG00005012834) KCNIP4 (ENSLCRG00005012837) sec24d (ENSLCRG00005012844) SYNPO2 (ENSLCRG00005013058) myoz2a (ENSLCRG00005013059) USP53 (ENSLCRG00005013064) PTPRD (ENSLCRG00005013201) TYRP1 (ENSLCRG00005022626) LURAP1L (ENSLCRG00005022628) MPDZ (ENSLCRG00005022638) ADGRL3 (ENSLCRG00005022709) ##22 ENSLCRG00005023487 ENSLCRG00005023490 ENSLCRG00005023500 elavl2 (ENSLCRG00005023504) gpr137ba (ENSLCRG00005023507) EGLN1 (ENSLCRG00005023508) tsnax (ENSLCRG00005023510) disc1 (ENSLCRG00005023511) SIPA1L2 (ENSLCRG00005023512) ENSLCRG00005023518 ntpcr (ENSLCRG00005023519) ENSLCRG00005023523 ENSLCRG00005023526 KLHDC3 (ENSLCRG00005023527) ENSLCRG00005023528 Gilthead seabream MODERN SPECIES 1 ENSSAUG00010026697 ccdc149a (ENSSAUG00010026696) ENSSAUG00010026692 PPARGC1A (ENSSAUG00010026690) gba3 (ENSSAUG00010026688) ADGRA3 (ENSSAUG00010026684) KCNIP4 (ENSSAUG00010026681) sec24d (ENSSAUG00010026666) SYNPO2 (ENSSAUG00010026663) myoz2a (ENSSAUG00010026662) USP53 (ENSSAUG00010026657) PTPRD (ENSSAUG00010018340) TYRP1 (ENSSAUG00010018023) LURAP1L (ENSSAUG00010018021) MPDZ (ENSSAUG00010013816) ADGRL3 (ENSSAUG00010007883) ##22 ENSSAUG00010002251 CAAP1 (ENSSAUG00010002020) elavl2 (ENSSAUG00010001898) ENSSAUG00010001874 DMRTA1 (ENSSAUG00010001862) FABP2 (ENSSAUG00010001856) RBPMS (ENSSAUG00010001847) DCTN6 (ENSSAUG00010001835) SGCZ (ENSSAUG00010001811) ENSSAUG00010001789 mfsd8 (ENSSAUG00010001388) ENSSAUG00010001343 ENSSAUG00010001337 ENSSAUG00010001321 ENSSAUG00010001304 Perciformes ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00940000156393.a.a Cottioidei ANCESTRAL SPECIES 20 ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00940000156393.a.a Lumpfish MODERN SPECIES 9 PPARGC1A (ENSCLMG00005010970) ENSCLMG00005010965 gba3 (ENSCLMG00005010964) ADGRA3 (ENSCLMG00005010962) KCNIP4 (ENSCLMG00005010960) sec24d (ENSCLMG00005006504) SYNPO2 (ENSCLMG00005006493) myoz2a (ENSCLMG00005006455) USP53 (ENSCLMG00005006452) ENSCLMG00005006450 PTPRD (ENSCLMG00005006368) TYRP1 (ENSCLMG00005006363) LURAP1L (ENSCLMG00005006362) ENSCLMG00005006360 ENSCLMG00005006356 ADGRL3 (ENSCLMG00005006125) ##22 ENSCLMG00005006114 ENSCLMG00005006110 ELAVL2 (ENSCLMG00005006033) ENSCLMG00005006032 DMRTA1 (ENSCLMG00005006031) FABP2 (ENSCLMG00005006029) RBPMS (ENSCLMG00005006022) ENSCLMG00005006019 SGCZ (ENSCLMG00005006017) ENSCLMG00005006014 mfsd8 (ENSCLMG00005006012) ENSCLMG00005006011 ENSCLMG00005006010 ENSCLMG00005006007 ENSCLMG00005006006 Stickleback MODERN SPECIES 7 ccdc149a (ENSGACG00000019569) ENSGACG00000019549 PPARGC1A (ENSGACG00000019546) gba3 (ENSGACG00000019544) ADGRA3 (ENSGACG00000019543) KCNIP4 (ENSGACG00000019541) ENSGACG00000019539 sec24d (ENSGACG00000019537) SYNPO2 (ENSGACG00000019536) myoz2a (ENSGACG00000019535) USP53 (ENSGACG00000019533) PTPRD (ENSGACG00000019528) TYRP1 (ENSGACG00000019503) LURAP1L (ENSGACG00000019502) MPDZ (ENSGACG00000019499) ADGRL3 (ENSGACG00000019498) ##22 ENSGACG00000019493 CAAP1 (ENSGACG00000019489) elavl2 (ENSGACG00000019484) ENSGACG00000019483 DMRTA1 (ENSGACG00000019482) FABP2 (ENSGACG00000019474) RBPMS (ENSGACG00000019471) ENSGACG00000019464 SGCZ (ENSGACG00000019458) ENSGACG00000019456 ENSGACG00000019450 mfsd8 (ENSGACG00000019443) ENSGACG00000019438 ENSGACG00000019436 ENSGACG00000019435 Perciformes_a ANCESTRAL SPECIES 18 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a ENSGT00390000002596.a Pike perch MODERN SPECIES 65 ENSSLUG00000023358 PPARGC1A (ENSSLUG00000023352) gba3 (ENSSLUG00000023345) ADGRA3 (ENSSLUG00000022914) KCNIP4 (ENSSLUG00000022875) sec24d (ENSSLUG00000022346) ENSSLUG00000022306 myoz2a (ENSSLUG00000022299) USP53 (ENSSLUG00000022283) PTPRD (ENSSLUG00000019313) ENSSLUG00000019070 TYRP1 (ENSSLUG00000019066) LURAP1L (ENSSLUG00000019062) MPDZ (ENSSLUG00000015084) ENSSLUG00000014877 ADGRL3 (ENSSLUG00000010650) ##22 ENSSLUG00000025298 ENSSLUG00000025270 elavl2 (ENSSLUG00000025255) Channel bull blenny MODERN SPECIES 9 KCNIP4 (ENSCGOG00000011991) ENSCGOG00000011982 sec24d (ENSCGOG00000010688) ENSCGOG00000010643 ENSCGOG00000010641 ENSCGOG00000010638 myoz2a (ENSCGOG00000022655) USP53 (ENSCGOG00000022651) ENSCGOG00000022646 PTPRD (ENSCGOG00000015824) TYRP1 (ENSCGOG00000015529) LURAP1L (ENSCGOG00000015528) ENSCGOG00000015527 MPDZ (ENSCGOG00000015268) ENSCGOG00000015257 ADGRL3 (ENSCGOG00000012346) ##22 ENSCGOG00000011945 CAAP1 (ENSCGOG00000011927) elavl2 (ENSCGOG00000011921) ENSCGOG00000011919 ENSCGOG00000011912 DMRTA1 (ENSCGOG00000011906) FABP2 (ENSCGOG00000011898) RBPMS (ENSCGOG00000011895) ENSCGOG00000011894 ENSCGOG00000011893 ENSCGOG00000011891 ENSCGOG00000011883 mfsd8 (ENSCGOG00000011812) ENSCGOG00000011808 ccdc96 (ENSCGOG00000011804) Ballan wrasse MODERN SPECIES 1165 ENSLBEG00000027336 ##22 Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Carangaria ANCESTRAL SPECIES 20 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Carangaria_A ANCESTRAL SPECIES 32 ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Seriola ANCESTRAL SPECIES 92 ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Greater amberjack MODERN SPECIES 104 ccdc149a (ENSSDUG00000007338) ENSSDUG00000007372 PPARGC1A (ENSSDUG00000007408) ADGRA3 (ENSSDUG00000007460) gba3 (ENSSDUG00000007517) KCNIP4 (ENSSDUG00000007532) sec24d (ENSSDUG00000007582) SYNPO2 (ENSSDUG00000007614) myoz2a (ENSSDUG00000007627) USP53 (ENSSDUG00000007643) PTPRD (ENSSDUG00000007674) ENSSDUG00000007762 TYRP1 (ENSSDUG00000007769) LURAP1L (ENSSDUG00000007782) MPDZ (ENSSDUG00000007803) ADGRL3 (ENSSDUG00000007904) ##22 ENSSDUG00000007944 ENSSDUG00000007974 CAAP1 (ENSSDUG00000008127) elavl2 (ENSSDUG00000008140) Yellowtail amberjack MODERN SPECIES 3028 ENSSLDG00000006896 ccdc149a (ENSSLDG00000006908) ENSSLDG00000006937 PPARGC1A (ENSSLDG00000006987) gba3 (ENSSLDG00000007033) ADGRA3 (ENSSLDG00000007055) KCNIP4 (ENSSLDG00000007147) sec24d (ENSSLDG00000007259) SYNPO2 (ENSSLDG00000007325) myoz2a (ENSSLDG00000007340) USP53 (ENSSLDG00000007359) PTPRD (ENSSLDG00000007511) TYRP1 (ENSSLDG00000007913) LURAP1L (ENSSLDG00000007937) MPDZ (ENSSLDG00000007978) ADGRL3 (ENSSLDG00000008084) ##22 ENSSLDG00000008148 ENSSLDG00000008240 CAAP1 (ENSSLDG00000008437) elavl2 (ENSSLDG00000008455) Barramundi perch MODERN SPECIES 17 ENSLCAG00010017032 ccdc149a (ENSLCAG00010017029) ENSLCAG00010017007 PPARGC1A (ENSLCAG00010017001) gba3 (ENSLCAG00010017000) ADGRA3 (ENSLCAG00010016996) KCNIP4 (ENSLCAG00010016993) sec24d (ENSLCAG00010016774) SYNPO2 (ENSLCAG00010016710) myoz2a (ENSLCAG00010016708) USP53 (ENSLCAG00010016704) PTPRD (ENSLCAG00010016357) TYRP1 (ENSLCAG00010016274) LURAP1L (ENSLCAG00010016272) MPDZ (ENSLCAG00010016203) ADGRL3 (ENSLCAG00010015142) ##22 ENSLCAG00010014177 CAAP1 (ENSLCAG00010014034) SLC45A4 (ENSLCAG00010014030) DENND3 (ENSLCAG00010013982) ATP4A (ENSLCAG00010013219) TBRG4 (ENSLCAG00010013111) ENSLCAG00010013106 glipr2l (ENSLCAG00010013101) steap4 (ENSLCAG00010013095) ENSLCAG00010013088 steap4 (ENSLCAG00010013083) ENSLCAG00010013081 ENSLCAG00010013078 mindy3 (ENSLCAG00010013064) ITGA8 (ENSLCAG00010013051) Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a ENSGT00390000002596.a Tongue sole MODERN SPECIES ENSCSEG00000006920 PPARGC1A (ENSCSEG00000006884) gba3 (ENSCSEG00000006878) ENSCSEG00000006872 ADGRA3 (ENSCSEG00000006830) KCNIP4 (ENSCSEG00000006784) sec24d (ENSCSEG00000006764) SYNPO2 (ENSCSEG00000006762) myoz2a (ENSCSEG00000006757) USP53 (ENSCSEG00000006719) PTPRD (ENSCSEG00000006693) ENSCSEG00000006686 TYRP1 (ENSCSEG00000006672) LURAP1L (ENSCSEG00000006665) MPDZ (ENSCSEG00000006527) ADGRL3 (ENSCSEG00000006436) ##22 ENSCSEG00000006362 CAAP1 (ENSCSEG00000006347) elavl2 (ENSCSEG00000006335) ENSCSEG00000006296 ENSCSEG00000006280 ATP1B2 (ENSCSEG00000006274) ENSCSEG00000006137 zgc:123107 (ENSCSEG00000006042) ENSCSEG00000006034 anapc10 (ENSCSEG00000006022) abce1 (ENSCSEG00000005978) CAMTA2 (ENSCSEG00000005942) ENSCSEG00000005932 ENSCSEG00000005928 eno3 (ENSCSEG00000005912) Turbot MODERN SPECIES 11 ENSSMAG00000011559 ENSSMAG00000036898 PPARGC1A (ENSSMAG00000011571) ENSSMAG00000011635 gba3 (ENSSMAG00000011641) ADGRA3 (ENSSMAG00000011652) KCNIP4 (ENSSMAG00000009912) sec24d (ENSSMAG00000009962) SYNPO2 (ENSSMAG00000009992) myoz2a (ENSSMAG00000010051) ENSSMAG00000010060 PTPRD (ENSSMAG00000010085) TYRP1 (ENSSMAG00000010205) LURAP1L (ENSSMAG00000010216) MPDZ (ENSSMAG00000010226) ENSSMAG00000010310 ##22 ENSSMAG00000010548 CAAP1 (ENSSMAG00000010726) ENSSMAG00000010745 ENSSMAG00000010774 DMRTA1 (ENSSMAG00000010840) ENSSMAG00000010853 ENSSMAG00000010871 ENSSMAG00000010905 ENSSMAG00000010942 ENSSMAG00000010960 ENSSMAG00000010999 ENSSMAG00000011023 ENSSMAG00000035603 ENSSMAG00000011064 ENSSMAG00000033283 Anabantaria ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Zig-zag eel MODERN SPECIES 9 ENSMAMG00000026600 ccdc149a (ENSMAMG00000005569) ENSMAMG00000005544 PPARGC1A (ENSMAMG00000005531) gba3 (ENSMAMG00000005526) ADGRA3 (ENSMAMG00000005447) KCNIP4 (ENSMAMG00000005426) sec24d (ENSMAMG00000005409) SYNPO2 (ENSMAMG00000005405) myoz2a (ENSMAMG00000005400) USP53 (ENSMAMG00000005390) PTPRD (ENSMAMG00000005311) TYRP1 (ENSMAMG00000005278) LURAP1L (ENSMAMG00000005271) MPDZ (ENSMAMG00000005182) ENSMAMG00000005041 ##22 ENSMAMG00000004862 CAAP1 (ENSMAMG00000004841) ENSMAMG00000004829 ENSMAMG00000004806 ENSMAMG00000004674 DMRTA1 (ENSMAMG00000004643) ENSMAMG00000004624 ENSMAMG00000004604 ENSMAMG00000004366 ENSMAMG00000004328 ENSMAMG00000004311 ENSMAMG00000004270 ENSMAMG00000026435 ENSMAMG00000025393 ENSMAMG00000025189 Anabantoidei ANCESTRAL SPECIES 24 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Climbing perch MODERN SPECIES 9 ccdc149a (ENSATEG00000016582) ENSATEG00000016651 PPARGC1A (ENSATEG00000016702) gba3 (ENSATEG00000016764) ADGRA3 (ENSATEG00000016776) KCNIP4 (ENSATEG00000016803) sec24d (ENSATEG00000016860) SYNPO2 (ENSATEG00000017221) myoz2a (ENSATEG00000017228) USP53 (ENSATEG00000017245) PTPRD (ENSATEG00000017283) TYRP1 (ENSATEG00000017446) LURAP1L (ENSATEG00000017466) ENSATEG00000026345 MPDZ (ENSATEG00000017540) ENSATEG00000017807 ##22 ENSATEG00000028927 ENSATEG00000017971 CAAP1 (ENSATEG00000018064) ENSATEG00000018073 ENSATEG00000027806 DMRTA1 (ENSATEG00000018104) ENSATEG00000018157 ENSATEG00000018184 ENSATEG00000018250 ENSATEG00000018273 ENSATEG00000018302 ENSATEG00000018344 ENSATEG00000018405 ENSATEG00000018746 ENSATEG00000018729 Siamese fighting fish MODERN SPECIES 10 ccdc149a (ENSBSLG00000018107) ENSBSLG00000018041 PPARGC1A (ENSBSLG00000017998) gba3 (ENSBSLG00000017992) ADGRA3 (ENSBSLG00000017720) KCNIP4 (ENSBSLG00000017625) sec24d (ENSBSLG00000015555) SYNPO2 (ENSBSLG00000015420) myoz2a (ENSBSLG00000015413) USP53 (ENSBSLG00000015366) ENSBSLG00000015352 PTPRD (ENSBSLG00000004441) LURAP1L (ENSBSLG00000003235) MPDZ (ENSBSLG00000002122) ENSBSLG00000002092 ADGRL3 (ENSBSLG00000001907) ##22 ENSBSLG00000001323 CAAP1 (ENSBSLG00000001197) elavl2 (ENSBSLG00000000766) ENSBSLG00000000731 DMRTA1 (ENSBSLG00000000722) FABP2 (ENSBSLG00000000720) RBPMS (ENSBSLG00000000706) ENSBSLG00000000686 SGCZ (ENSBSLG00000000669) ENSBSLG00000000651 mfsd8 (ENSBSLG00000000635) ENSBSLG00000000606 ENSBSLG00000000582 cldnd1a (ENSBSLG00000000449) ACY3 (ENSBSLG00000000424) Ovalentaria ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Atherinomorphae ANCESTRAL SPECIES 22 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Oryzias ANCESTRAL SPECIES 21 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000159026 ENSGT00390000018729.b ENSGT00390000007726.b ENSGT01060000253413 ENSGT00390000002231.b Oryzias_b ANCESTRAL SPECIES 18 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000159026 ENSGT00390000018729.b ENSGT00390000007726.b ENSGT00940000163911.a.a.b.a.a.a.b.a.b ENSGT00940000163911.a.a.b.a.a.a.b.a.a ENSGT01040000240385.A.a.b.a Indian medaka MODERN SPECIES 19 ENSOMEG00000006152 ccdc149a (ENSOMEG00000006119) ENSOMEG00000006075 PPARGC1A (ENSOMEG00000000670) gba3 (ENSOMEG00000005946) ADGRA3 (ENSOMEG00000005915) KCNIP4 (ENSOMEG00000005776) sec24d (ENSOMEG00000005678) ENSOMEG00000005638 myoz2a (ENSOMEG00000005628) ENSOMEG00000005608 PTPRD (ENSOMEG00000005568) TYRP1 (ENSOMEG00000005449) LURAP1L (ENSOMEG00000005431) MPDZ (ENSOMEG00000005411) ADGRL3 (ENSOMEG00000005355) ##22 ENSOMEG00000005308 CAAP1 (ENSOMEG00000005226) elavl2 (ENSOMEG00000005178) ENSOMEG00000005141 ENSOMEG00000005083 DMRTA1 (ENSOMEG00000005064) RBPMS (ENSOMEG00000005044) ENSOMEG00000004999 SGCZ (ENSOMEG00000004970) syt4 (ENSOMEG00000004955) ENSOMEG00000004934 ENSOMEG00000004901 ENSOMEG00000004862 ENSOMEG00000004842 ENSOMEG00000004825 Javanese ricefish MODERN SPECIES 9 ENSOJAG00000013236 ccdc149a (ENSOJAG00000013251) ENSOJAG00000013382 PPARGC1A (ENSOJAG00000013648) gba3 (ENSOJAG00000013665) ADGRA3 (ENSOJAG00000013743) KCNIP4 (ENSOJAG00000014582) sec24d (ENSOJAG00000014803) SYNPO2 (ENSOJAG00000017001) myoz2a (ENSOJAG00000017040) USP53 (ENSOJAG00000017053) PTPRD (ENSOJAG00000017841) ENSOJAG00000023091 TYRP1 (ENSOJAG00000023096) LURAP1L (ENSOJAG00000023101) ADGRL3 (ENSOJAG00000023481) ##22 ENSOJAG00000023853 ENSOJAG00000023915 CAAP1 (ENSOJAG00000023918) elavl2 (ENSOJAG00000023923) ENSOJAG00000023928 DMRTA1 (ENSOJAG00000023929) ENSOJAG00000023932 RBPMS (ENSOJAG00000023935) DCTN6 (ENSOJAG00000023939) SGCZ (ENSOJAG00000023942) syt4 (ENSOJAG00000023949) ENSOJAG00000023952 ENSOJAG00000023959 ENSOJAG00000023963 ENSOJAG00000023968 Oryzias_a ANCESTRAL SPECIES 27 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a.g ENSGT00940000154658.a.h ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000159026 ENSGT00390000018729.b ENSGT00390000007726.b ENSGT00940000174504.B Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000004819 PPARGC1A (ENSORLG00000004788) gba3 (ENSORLG00000004780) ADGRA3 (ENSORLG00000004767) ENSORLG00000023209 KCNIP4 (ENSORLG00000004748) sec24d (ENSORLG00000004729) SYNPO2 (ENSORLG00000028437) myoz2a (ENSORLG00000025044) USP53 (ENSORLG00000004686) ENSORLG00000022754 PTPRD (ENSORLG00000004650) TYRP1 (ENSORLG00000004326) LURAP1L (ENSORLG00000028081) MPDZ (ENSORLG00000004290) ADGRL3 (ENSORLG00000004254) ##22 ENSORLG00000023983 ENSORLG00000028831 ENSORLG00000027686 CAAP1 (ENSORLG00000004231) ENSORLG00000022241 ELAVL2 (ENSORLG00000004217) ENSORLG00000027845 ENSORLG00000004157 DMRTA1 (ENSORLG00000004153) ENSORLG00000004146 RBPMS (ENSORLG00000004135) ENSORLG00000026244 ENSORLG00000004115 syt4 (ENSORLG00000004098) ENSORLG00000023575 Chinese medaka MODERN SPECIES 966 PTPRD (ENSOSIG00000016986) TYRP1 (ENSOSIG00000019473) LURAP1L (ENSOSIG00000019476) MPDZ (ENSOSIG00000019487) ADGRL3 (ENSOSIG00000019758) ##22 ENSOSIG00000023262 ENSOSIG00000023318 Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00650000093871 Cyprinodontoidei ANCESTRAL SPECIES 21 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00650000093871 Poeciliinae ANCESTRAL SPECIES 21 ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b.q.b ENSGT01070000253822.D.b.q.a.b ENSGT01070000253822.D.b.q.a.a ENSGT00980000198603.A Poecilia ANCESTRAL SPECIES 48 ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b.a ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b.q.b ENSGT01070000253822.D.b.q.a.a.a.a.a ENSGT01070000253822.D.b.q.a.b ENSGT01070000253822.D.b.q.a.a.a.b NAME_6 ANCESTRAL SPECIES 398 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b.b Amazon molly MODERN SPECIES 407 ENSPFOG00000000977 TYRP1 (ENSPFOG00000001047) LURAP1L (ENSPFOG00000001165) MPDZ (ENSPFOG00000001361) ADGRL3 (ENSPFOG00000001870) ##22 ENSPFOG00000002397 CAAP1 (ENSPFOG00000003391) ELAVL2 (ENSPFOG00000003436) ENSPFOG00000003500 Sailfin molly MODERN SPECIES 602 ADGRL3 (ENSPLAG00000001195) ##22 Guppy MODERN SPECIES 448 ENSPREG00000019297 ccdc149a (ENSPREG00000019271) ENSPREG00000019256 PPARGC1A (ENSPREG00000019171) gba3 (ENSPREG00000019133) ADGRA3 (ENSPREG00000019098) KCNIP4 (ENSPREG00000018931) sec24d (ENSPREG00000018869) ENSPREG00000018845 myoz2a (ENSPREG00000018830) USP53 (ENSPREG00000018805) PTPRD (ENSPREG00000018440) TYRP1 (ENSPREG00000018301) LURAP1L (ENSPREG00000018293) ENSPREG00000017839 ADGRL3 (ENSPREG00000017398) ##22 ENSPREG00000017212 CAAP1 (ENSPREG00000017188) elavl2 (ENSPREG00000017160) ENSPREG00000017063 DMRTA1 (ENSPREG00000017021) FABP2 (ENSPREG00000016995) RBPMS (ENSPREG00000016959) DCTN6 (ENSPREG00000016932) SGCZ (ENSPREG00000016904) ENSPREG00000016861 mfsd8 (ENSPREG00000016815) ENSPREG00000016791 ENSPREG00000016765 ENSPREG00000016690 ENSPREG00000016666 Platyfish MODERN SPECIES 5 dhx15 (ENSXMAG00000008425) PPARGC1A (ENSXMAG00000007748) gba3 (ENSXMAG00000007766) ADGRA3 (ENSXMAG00000007771) KCNIP4 (ENSXMAG00000001979) sec24d (ENSXMAG00000001944) ENSXMAG00000001940 myoz2a (ENSXMAG00000023576) USP53 (ENSXMAG00000021530) PTPRD (ENSXMAG00000004920) ENSXMAG00000028029 TYRP1 (ENSXMAG00000004910) LURAP1L (ENSXMAG00000004908) ENSXMAG00000027724 MPDZ (ENSXMAG00000004907) ADGRL3 (ENSXMAG00000004882) ##22 ENSXMAG00000004781 CAAP1 (ENSXMAG00000022303) ELAVL2 (ENSXMAG00000029211) ENSXMAG00000021716 DMRTA1 (ENSXMAG00000012522) FABP2 (ENSXMAG00000027561) RBPMS (ENSXMAG00000027637) DCTN6 (ENSXMAG00000012493) SGCZ (ENSXMAG00000012490) mfsd8 (ENSXMAG00000012556) ENSXMAG00000021162 ENSXMAG00000012545 ENSXMAG00000012542 ENSXMAG00000012538 ENSXMAG00000026245 NAME_4 ANCESTRAL SPECIES 512 ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 Mummichog MODERN SPECIES 2406 TYRP1 (ENSFHEG00000003082) LURAP1L (ENSFHEG00000000611) MPDZ (ENSFHEG00000003047) ENSFHEG00000002996 ENSFHEG00000002960 ADGRL3 (ENSFHEG00000002945) ##22 ENSFHEG00000002892 Sheepshead minnow MODERN SPECIES 414 TYRP1 (ENSCVAG00000003071) LURAP1L (ENSCVAG00000003078) MPDZ (ENSCVAG00000000695) ENSCVAG00000003218 ADGRL3 (ENSCVAG00000003326) ##22 ENSCVAG00000003342 ENSCVAG00000003346 Aplocheiloidei ANCESTRAL SPECIES 65 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B Turquoise killifish MODERN SPECIES 1613 ENSNFUG00015023290 ENSNFUG00015023288 ENSNFUG00015023287 ENSNFUG00015023285 ENSNFUG00015023284 ENSNFUG00015023282 PTPRD (ENSNFUG00015006628) ENSNFUG00015005452 ENSNFUG00015005449 ENSNFUG00015005437 TYRP1 (ENSNFUG00015005425) LURAP1L (ENSNFUG00015005421) MPDZ (ENSNFUG00015004270) ENSNFUG00015004062 ENSNFUG00015004059 LPHN3 (ENSNFUG00015002277) ##22 ENSNFUG00015000803 FP236812.4 (ENSNFUG00015000426) ENSNFUG00015000422 ENSNFUG00015000419 ENSNFUG00015000415 elavl2 (ENSNFUG00015000395) PRKCSH (ENSNFUG00015000360) DMRTA1 (ENSNFUG00015000348) FABP2 (ENSNFUG00015000342) RBPMS (ENSNFUG00015000331) DCTN6 (ENSNFUG00015000312) SGCZ (ENSNFUG00015000297) ZNF438 (ENSNFUG00015000285) ENSNFUG00015000281 BX470141.1 (ENSNFUG00015000266) Mangrove rivulus MODERN SPECIES 29 ENSKMAG00000005335 PPARGC1A (ENSKMAG00000005390) ENSKMAG00000005471 gba3 (ENSKMAG00000005482) ADGRA3 (ENSKMAG00000005518) KCNIP4 (ENSKMAG00000005612) ENSKMAG00000005659 sec24d (ENSKMAG00000005695) ENSKMAG00000005720 myoz2a (ENSKMAG00000005757) USP53 (ENSKMAG00000005777) PTPRD (ENSKMAG00000005817) TYRP1 (ENSKMAG00000005890) LURAP1L (ENSKMAG00000005922) MPDZ (ENSKMAG00000005956) ADGRL3 (ENSKMAG00000006060) ##22 ENSKMAG00000006133 CAAP1 (ENSKMAG00000006286) elavl2 (ENSKMAG00000006299) ENSKMAG00000006331 DMRTA1 (ENSKMAG00000006350) ENSKMAG00000006358 RBPMS (ENSKMAG00000006377) SGCZ (ENSKMAG00000006407) ENSKMAG00000006468 mfsd8 (ENSKMAG00000006512) ENSKMAG00000006564 ENSKMAG00000006583 Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Cichlidae ANCESTRAL SPECIES 20 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Nile tilapia MODERN SPECIES 15 ENSONIG00000039847 ccdc149a (ENSONIG00000028055) ENSONIG00000007642 PPARGC1A (ENSONIG00000007635) gba3 (ENSONIG00000007634) ADGRA3 (ENSONIG00000036115) KCNIP4 (ENSONIG00000041474) sec24d (ENSONIG00000007619) SYNPO2 (ENSONIG00000032796) myoz2a (ENSONIG00000007614) USP53 (ENSONIG00000007612) PTPRD (ENSONIG00000007588) TYRP1 (ENSONIG00000007584) LURAP1L (ENSONIG00000007582) MPDZ (ENSONIG00000007574) ADGRL3 (ENSONIG00000007571) ##22 ENSONIG00000028332 ENSONIG00000007557 ENSONIG00000030865 ENSONIG00000033798 elavl2 (ENSONIG00000007552) ENSONIG00000038581 ENSONIG00000040635 ENSONIG00000027429 FABP2 (ENSONIG00000007548) RBPMS (ENSONIG00000007546) ENSONIG00000007544 SGCZ (ENSONIG00000007542) ENSONIG00000007538 mfsd8 (ENSONIG00000007537) ENSONIG00000032206 Pseudocrenilabrinae_A ANCESTRAL SPECIES 23 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Haplochromini ANCESTRAL SPECIES 31 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Burton s mouthbrooder MODERN SPECIES 393 TYRP1 (ENSHBUG00000006209) LURAP1L (ENSHBUG00000001020) MPDZ (ENSHBUG00000006186) ADGRL3 (ENSHBUG00000006141) ##22 ENSHBUG00000006091 ENSHBUG00000006066 CAAP1 (ENSHBUG00000005978) elavl2 (ENSHBUG00000005968) ENSHBUG00000005942 DMRTA1 (ENSHBUG00000000928) FABP2 (ENSHBUG00000005917) RBPMS (ENSHBUG00000005888) ENSHBUG00000005870 ENSHBUG00000005832 Haplochromini_A ANCESTRAL SPECIES 35 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a P. nyererei MODERN SPECIES 421 ENSPNYG00000006753 ccdc149a (ENSPNYG00000006765) ENSPNYG00000006790 PPARGC1A (ENSPNYG00000006846) gba3 (ENSPNYG00000006891) ADGRA3 (ENSPNYG00000006906) KCNIP4 (ENSPNYG00000006925) sec24d (ENSPNYG00000006950) ENSPNYG00000006966 myoz2a (ENSPNYG00000006977) ENSPNYG00000007004 PTPRD (ENSPNYG00000007040) TYRP1 (ENSPNYG00000007139) LURAP1L (ENSPNYG00000007165) MPDZ (ENSPNYG00000007185) ADGRL3 (ENSPNYG00000007344) ##22 Haplochromini_B ANCESTRAL SPECIES 25 ENSGT00940000165054.C.f.c.a.a.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Zebra mbuna MODERN SPECIES 1106 ENSMZEG00005001757 PPARGC1A (ENSMZEG00005001739) ENSMZEG00005001709 gba3 (ENSMZEG00005001698) ADGRA3 (ENSMZEG00005001689) KCNIP4 (ENSMZEG00005001667) sec24d (ENSMZEG00005001595) ENSMZEG00005001547 myoz2a (ENSMZEG00005001520) USP53 (ENSMZEG00005001507) PTPRD (ENSMZEG00005001243) ENSMZEG00005001208 TYRP1 (ENSMZEG00005001187) LURAP1L (ENSMZEG00005001183) MPDZ (ENSMZEG00005001094) ADGRL3 (ENSMZEG00005001028) ##22 ENSMZEG00005000817 CAAP1 (ENSMZEG00005000801) elavl2 (ENSMZEG00005000778) ENSMZEG00005000772 DMRTA1 (ENSMZEG00005000752) FABP2 (ENSMZEG00005000743) RBPMS (ENSMZEG00005000698) ENSMZEG00005000647 SGCZ (ENSMZEG00005000612) ENSMZEG00005000585 mfsd8 (ENSMZEG00005000569) ENSMZEG00005000528 ENSMZEG00005000495 ENSMZEG00005000478 cldnd1a (ENSMZEG00005000455) Eastern happy MODERN SPECIES 15 ENSACLG00000000737 ENSACLG00000000749 ENSACLG00000000765 PPARGC1A (ENSACLG00000001002) gba3 (ENSACLG00000001126) ADGRA3 (ENSACLG00000001140) KCNIP4 (ENSACLG00000001315) sec24d (ENSACLG00000001362) ENSACLG00000001403 myoz2a (ENSACLG00000001413) USP53 (ENSACLG00000001439) PTPRD (ENSACLG00000001550) TYRP1 (ENSACLG00000001942) LURAP1L (ENSACLG00000001998) MPDZ (ENSACLG00000002011) ADGRL3 (ENSACLG00000002240) ##22 ENSACLG00000002311 ENSACLG00000002328 CAAP1 (ENSACLG00000002613) elavl2 (ENSACLG00000002715) ENSACLG00000002778 DMRTA1 (ENSACLG00000002823) FABP2 (ENSACLG00000002847) RBPMS (ENSACLG00000002926) ENSACLG00000002952 SGCZ (ENSACLG00000003007) ENSACLG00000003019 mfsd8 (ENSACLG00000003047) ENSACLG00000003069 ENSACLG00000003117 ENSACLG00000003125 Lyretail cichlid MODERN SPECIES 446 ADGRL3 (ENSNBRG00000009989) ##22 ENSNBRG00000010023 ENSNBRG00000010113 CAAP1 (ENSNBRG00000010153) elavl2 (ENSNBRG00000010284) ENSNBRG00000010299 DMRTA1 (ENSNBRG00000010312) FABP2 (ENSNBRG00000010321) ENSNBRG00000010333 SGCZ (ENSNBRG00000010366) mfsd8 (ENSNBRG00000010425) ENSNBRG00000010487 ENSNBRG00000010513 ZFP91 (ENSNBRG00000010534) Midas cichlid MODERN SPECIES 793 ccdc149a (ENSACIG00000009651) dhx15 (ENSACIG00000009701) PPARGC1A (ENSACIG00000009732) gba3 (ENSACIG00000009785) ADGRA3 (ENSACIG00000009827) KCNIP4 (ENSACIG00000009882) sec24d (ENSACIG00000009914) SYNPO2 (ENSACIG00000010161) myoz2a (ENSACIG00000010197) USP53 (ENSACIG00000010321) PTPRD (ENSACIG00000010385) TYRP1 (ENSACIG00000010444) LURAP1L (ENSACIG00000010470) MPDZ (ENSACIG00000010482) ADGRL3 (ENSACIG00000010583) ##22 ENSACIG00000010635 CAAP1 (ENSACIG00000010733) elavl2 (ENSACIG00000010855) ENSACIG00000011339 DMRTA1 (ENSACIG00000011367) FABP2 (ENSACIG00000011389) RBPMS (ENSACIG00000011395) ENSACIG00000011410 SGCZ (ENSACIG00000011434) ENSACIG00000011477 mfsd8 (ENSACIG00000011553) ENSACIG00000011583 ENSACIG00000011601 ZFP91 (ENSACIG00000011617) Pomacentridae ANCESTRAL SPECIES 28 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a.e ENSGT00940000154658.a.f ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00940000166038 Pomacentridae_A ANCESTRAL SPECIES 22 ENSGT00940000165054.C.f.b ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a.f ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT01090000260059.a.b.b.b.a.d.a.b ENSGT00940000166038 Amphiprion ANCESTRAL SPECIES 96 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000162226.b ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a.f ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT01090000260059.a.b.b.b.a.d.a.b ENSGT00940000166038 Orange clownfish MODERN SPECIES 15 ENSAPEG00000022664 KCNIP4 (ENSAPEG00000022684) sec24d (ENSAPEG00000022743) ENSAPEG00000022778 myoz2a (ENSAPEG00000022815) USP53 (ENSAPEG00000022822) PTPRD (ENSAPEG00000022919) TYRP1 (ENSAPEG00000023168) LURAP1L (ENSAPEG00000023192) ENSAPEG00000023197 ENSAPEG00000023207 ENSAPEG00000023222 ENSAPEG00000023231 ENSAPEG00000023237 ENSAPEG00000023255 ADGRL3 (ENSAPEG00000023284) ##22 ENSAPEG00000023314 ENSAPEG00000023327 ENSAPEG00000023340 ENSAPEG00000023386 CAAP1 (ENSAPEG00000023464) elavl2 (ENSAPEG00000023474) ENSAPEG00000023497 DMRTA1 (ENSAPEG00000023525) FABP2 (ENSAPEG00000023534) RBPMS (ENSAPEG00000023543) ENSAPEG00000023550 SGCZ (ENSAPEG00000023566) ENSAPEG00000023603 mfsd8 (ENSAPEG00000023620) ENSAPEG00000023637 Clown anemonefish MODERN SPECIES 3582 ADGRA3 (ENSAOCG00000000992) ENSAOCG00000014772 KCNIP4 (ENSAOCG00000014839) sec24d (ENSAOCG00000014868) ENSAOCG00000014874 myoz2a (ENSAOCG00000014887) USP53 (ENSAOCG00000014900) PTPRD (ENSAOCG00000015122) TYRP1 (ENSAOCG00000015186) LURAP1L (ENSAOCG00000015194) MPDZ (ENSAOCG00000015306) ENSAOCG00000015340 ADGRL3 (ENSAOCG00000015401) ##22 Spiny chromis MODERN SPECIES 1031 ADGRL3 (ENSAPOG00000015258) ##22 ENSAPOG00000015279 Bicolor damselfish MODERN SPECIES 1874 ENSSPAG00000012755 ##22 ENSSPAG00000012738 ENSSPAG00000012730 Tiger tail seahorse MODERN SPECIES 263 ENSHCOG00000006220 TYRP1 (ENSHCOG00000006206) LURAP1L (ENSHCOG00000006193) ENSHCOG00000006190 ENSHCOG00000006162 ENSHCOG00000006079 ADGRL3 (ENSHCOG00000006063) ##22 ENSHCOG00000006029 elavl2 (ENSHCOG00000005961) ENSHCOG00000005917 ENSHCOG00000005903 ENSHCOG00000005785 RBPMS (ENSHCOG00000005774) ENSHCOG00000005755 mfsd8 (ENSHCOG00000005735) ENSHCOG00000005564 ENSHCOG00000000671 pde5ab (ENSHCOG00000005548) ENSHCOG00000005502 mad2l1 (ENSHCOG00000000878) ENSHCOG00000005473 ENSHCOG00000000622 Pinecone sodierfish MODERN SPECIES 9 ccdc149a (ENSMMDG00005015256) sod3a (ENSMMDG00005015252) ENSMMDG00005014665 PPARGC1A (ENSMMDG00005014661) gba3 (ENSMMDG00005014659) ADGRA3 (ENSMMDG00005013961) KCNIP4 (ENSMMDG00005013889) sec24d (ENSMMDG00005013882) SYNPO2 (ENSMMDG00005013867) myoz2a (ENSMMDG00005013846) USP53 (ENSMMDG00005013843) PTPRD (ENSMMDG00005013826) TYRP1 (ENSMMDG00005013822) LURAP1L (ENSMMDG00005013820) MPDZ (ENSMMDG00005013814) ADGRL3 (ENSMMDG00005011905) ##22 ENSMMDG00005011884 CAAP1 (ENSMMDG00005011878) elavl2 (ENSMMDG00005011843) ENSMMDG00005011836 DMRTA1 (ENSMMDG00005011830) FABP2 (ENSMMDG00005011827) RBPMS (ENSMMDG00005011825) DCTN6 (ENSMMDG00005011824) SGCZ (ENSMMDG00005011821) ENSMMDG00005011818 mfsd8 (ENSMMDG00005011787) ENSMMDG00005011775 ENSMMDG00005011772 ENSMMDG00005011769 ENSMMDG00005011765 Protacanthopterygii ANCESTRAL SPECIES 20 ENSGT00940000153289.a.a.b ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985.e ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT01090000260185.a ENSGT00940000154273.b ENSGT00940000159844 ENSGT00940000159372 ENSGT00940000160289 ENSGT00940000161071 ENSGT00940000166370 ENSGT00730000112287 ENSGT00940000174877 ENSGT00950000182903.a.b.i ENSGT01100000263613 ENSGT00940000163927.a.a.v ENSGT00940000153491.b.b.b Northern pike MODERN SPECIES 23 ccdc149a (ENSELUG00000016931) dhx15 (ENSELUG00000016984) PPARGC1A (ENSELUG00000017027) gba3 (ENSELUG00000017046) ADGRA3 (ENSELUG00000000643) KCNIP4 (ENSELUG00000017200) sec24d (ENSELUG00000017252) SYNPO2 (ENSELUG00000017264) myoz2a (ENSELUG00000017272) USP53 (ENSELUG00000017340) PTPRD (ENSELUG00000017519) ENSELUG00000026202 TYRP1 (ENSELUG00000017554) LURAP1L (ENSELUG00000000688) MPDZ (ENSELUG00000017678) ADGRL3 (ENSELUG00000017939) ##22 ENSELUG00000026228 ENSELUG00000018451 ENSELUG00000018661 ENSELUG00000026966 ENSELUG00000018725 BCL6B (ENSELUG00000018787) SLC16A13 (ENSELUG00000018819) acap1 (ENSELUG00000018894) agfg2 (ENSELUG00000018937) ENSELUG00000018954 si:ch73-335l21.4 (ENSELUG00000018979) dvl2 (ENSELUG00000019029) ENSELUG00000019044 ENSELUG00000027323 ENSELUG00000019034 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 256 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.b.d ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000161071.i ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.a ENSGT00940000158535 ENSGT00940000154838.A.f.b.b ENSGT00940000164016.e ENSGT00940000161062.c.b Salmoninae_a ANCESTRAL SPECIES 20 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT01090000260185.a.b ENSGT00940000154273.b.h ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000161071.i ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.a ENSGT00730000112044.e.a.b ENSGT01100000263613.c Salmo ANCESTRAL SPECIES 49 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.a.a ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00940000154273.b.h ENSGT01090000260185.a.b ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000155511.m ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00950000182903.a.b.i.g.a ENSGT00940000158535.w ENSGT00730000112044.e.a.b ENSGT01100000263613.c River trout MODERN SPECIES 38 ENSSTUG00000040665 ENSSTUG00000040820 ENSSTUG00000040837 PPARGC1A (ENSSTUG00000040880) ADGRA3 (ENSSTUG00000040967) KCNIP4 (ENSSTUG00000041209) ENSSTUG00000041307 sec24d (ENSSTUG00000041379) SYNPO2 (ENSSTUG00000043865) MYOZ2 (ENSSTUG00000043874) USP53 (ENSSTUG00000043882) PTPRD (ENSSTUG00000044156) TYRP1 (ENSSTUG00000050648) LURAP1L (ENSSTUG00000050649) MPDZ (ENSSTUG00000050655) ADGRL3 (ENSSTUG00000050737) ##22 ENSSTUG00000051008 ENSSTUG00000051014 ENSSTUG00000030551 ENSSTUG00000030569 BCL6B (ENSSTUG00000030577) acap1 (ENSSTUG00000030593) ENSSTUG00000030841 ENSSTUG00000030850 si:ch73-335l21.4 (ENSSTUG00000030854) dvl2 (ENSSTUG00000030865) ENSSTUG00000031101 ENSSTUG00000031105 ponzr1 (ENSSTUG00000031108) ENSSTUG00000031117 ENSSTUG00000031130 Atlantic salmon MODERN SPECIES 26 ENSSSAG00000063308 ENSSSAG00000106996 PPARGC1A (ENSSSAG00000063349) ENSSSAG00000063507 KCNIP4 (ENSSSAG00000092519) sec24d (ENSSSAG00000002760) SYNPO2 (ENSSSAG00000007715) MYOZ2 (ENSSSAG00000102011) USP53 (ENSSSAG00000007723) ENSSSAG00000035522 ENSSSAG00000112123 PTPRD (ENSSSAG00000111433) ENSSSAG00000076592 ci150 (ENSSSAG00000076598) ENSSSAG00000076710 ENSSSAG00000078516 ##22 ENSSSAG00000079215 ENSSSAG00000101481 ENSSSAG00000079518 ENSSSAG00000109805 ENSSSAG00000079541 ENSSSAG00000114456 ENSSSAG00000079545 acap1 (ENSSSAG00000087747) ENSSSAG00000079568 ENSSSAG00000092192 si:ch73-335l21.4 (ENSSSAG00000079580) dvl2 (ENSSSAG00000079590) ENSSSAG00000079609 ENSSSAG00000079611 ENSSSAG00000079612 Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00940000154273.b.h.a ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000161071.i ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.a ENSGT00730000112044.e.a.b ENSGT01100000263613.c ENSGT00940000163927.a.a.u Rainbow trout MODERN SPECIES 13 ENSOMYG00000057396 ENSOMYG00000062329 PPARGC1A (ENSOMYG00000045926) ENSOMYG00000045869 ENSOMYG00000045831 KCNIP4 (ENSOMYG00000045813) sec24d (ENSOMYG00000045731) SYNPO2 (ENSOMYG00000045708) MYOZ2 (ENSOMYG00000055798) ENSOMYG00000025319 USP53 (ENSOMYG00000045689) PTPRD (ENSOMYG00000044756) TYRP1 (ENSOMYG00000044591) LURAP1L (ENSOMYG00000044588) MPDZ (ENSOMYG00000043957) ENSOMYG00000034945 ##22 ENSOMYG00000033362 ENSOMYG00000033004 ENSOMYG00000032995 ENSOMYG00000055106 ENSOMYG00000032987 ENSOMYG00000032944 ENSOMYG00000032847 acap1 (ENSOMYG00000030898) ENSOMYG00000071940 agfg2 (ENSOMYG00000030472) ENSOMYG00000030390 si:ch73-335l21.4 (ENSOMYG00000030444) ENSOMYG00000018086 dvl2 (ENSOMYG00000030433) ENSOMYG00000030413 Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00730000112044.e.a.b ENSGT01100000263613.c ENSGT00940000163927.a.a.u ENSGT00940000153491.b.b.b.c ENSGT00940000166316.e ENSGT00390000014072.B ENSGT00940000156128.a.a ENSGT00940000165960.b ENSGT00940000167107 ENSGT00390000000592.w.b ENSGT00940000165100.b.c ENSGT00940000165987.b Coho salmon MODERN SPECIES 29 ENSOKIG00005003493 PPARGC1A (ENSOKIG00005003470) ADGRA3 (ENSOKIG00005003387) ENSOKIG00005003345 KCNIP4 (ENSOKIG00005003328) sec24d (ENSOKIG00005002237) SYNPO2 (ENSOKIG00005001919) MYOZ2 (ENSOKIG00005001910) USP53 (ENSOKIG00005001862) ENSOKIG00005001836 ENSOKIG00005047144 PTPRD (ENSOKIG00005029261) TYRP1 (ENSOKIG00005028467) LURAP1L (ENSOKIG00005028452) MPDZ (ENSOKIG00005022843) ADGRL3 (ENSOKIG00005016342) ##22 ENSOKIG00005016099 ENSOKIG00005015595 ENSOKIG00005015528 ENSOKIG00005015469 BCL6B (ENSOKIG00005015446) acap1 (ENSOKIG00005015336) agfg2 (ENSOKIG00005015299) ENSOKIG00005015281 si:ch73-335l21.4 (ENSOKIG00005015257) dvl2 (ENSOKIG00005015058) ENSOKIG00005015036 ENSOKIG00005015029 ENSOKIG00005015027 ponzr1 (ENSOKIG00005015022) ENSOKIG00005015014 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 55 ADGRL3 (ENSOTSG00005042055) ##22 ENSOTSG00005046578 TRIP6 (ENSOTSG00005046586) ENSOTSG00005046589 BCL6B (ENSOTSG00005046590) acap1 (ENSOTSG00005046591) agfg2 (ENSOTSG00005046596) ENSOTSG00005046598 si:ch73-335l21.4 (ENSOTSG00005046600) dvl2 (ENSOTSG00005046604) ENSOTSG00005046662 ENSOTSG00005046664 ponzr1 (ENSOTSG00005046665) ENSOTSG00005046667 cnpy4 (ENSOTSG00005046668) ENSOTSG00005046669 Chinook salmon MODERN SPECIES 40 ADGRL3 (ENSOTSG00005041695) ##22 ENSOTSG00005041609 ENSOTSG00005041603 ENSOTSG00005041601 ENSOTSG00005041600 BCL6B (ENSOTSG00005041595) acap1 (ENSOTSG00005037711) agfg2 (ENSOTSG00005037693) ENSOTSG00005037692 si:ch73-335l21.4 (ENSOTSG00005037688) si:ch73-335l21.2 (ENSOTSG00005037687) dvl2 (ENSOTSG00005037686) ENSOTSG00005037678 ENSOTSG00005037674 ponzr1 (ENSOTSG00005037672) ENSOTSG00005037670 Huchen MODERN SPECIES 230 MPDZ (ENSHHUG00000027039) ENSHHUG00000026094 ##22 ENSHHUG00000026084 ENSHHUG00000025821 ENSHHUG00000025793 TRIP6 (ENSHHUG00000025785) ENSHHUG00000025780 BCL6B (ENSHHUG00000025776) acap1 (ENSHHUG00000025677) agfg2 (ENSHHUG00000025669) zgc:103625 (ENSHHUG00000025667) Salmoninae ANCESTRAL SPECIES 594 ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT00940000154273.b.g ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Salmoninae_a ANCESTRAL SPECIES 34 ENSGT00940000163471.a.f ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Salmo ANCESTRAL SPECIES 18 ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ENSGT00940000160460 ENSGT00940000157235.k ENSGT00940000162818.c.a.g.b ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.u ENSGT00940000163927.a.a.v.a Atlantic salmon MODERN SPECIES 9 dhx15 (ENSSSAG00000067298) PPARGC1A (ENSSSAG00000108573) gba3 (ENSSSAG00000082579) ADGRA3 (ENSSSAG00000069698) KCNIP4 (ENSSSAG00000121775) ENSSSAG00000101838 sec24d (ENSSSAG00000069906) ENSSSAG00000110901 ENSSSAG00000074270 MYOZ2 (ENSSSAG00000074272) USP53 (ENSSSAG00000074275) PTPRD (ENSSSAG00000096916) tyrp-1 (ENSSSAG00000075543) LURAP1L (ENSSSAG00000122135) ENSSSAG00000075588 ENSSSAG00000076648 ##22 ENSSSAG00000079701 ENSSSAG00000117990 ENSSSAG00000079961 ENSSSAG00000079969 ENSSSAG00000079975 acap1 (ENSSSAG00000080011) agfg2 (ENSSSAG00000080121) ENSSSAG00000080127 si:ch73-335l21.2 (ENSSSAG00000080136) dvl2 (ENSSSAG00000080142) ENSSSAG00000080197 ENSSSAG00000090733 ENSSSAG00000113794 ponzr1 (ENSSSAG00000080201) ENSSSAG00000098248 River trout MODERN SPECIES 35 ccdc149a (ENSSTUG00000001799) dhx15 (ENSSTUG00000002166) PPARGC1A (ENSSTUG00000002234) gba3 (ENSSTUG00000002255) ADGRA3 (ENSSTUG00000002273) ENSSTUG00000002450 KCNIP4 (ENSSTUG00000002478) SEC24C (ENSSTUG00000002697) SYNPO2 (ENSSTUG00000005339) ENSSTUG00000005351 USP53 (ENSSTUG00000005403) PTPRD (ENSSTUG00000005964) TYRP1 (ENSSTUG00000028684) LURAP1L (ENSSTUG00000028702) MPDZ (ENSSTUG00000028873) ADGRL3 (ENSSTUG00000033369) ##22 ENSSTUG00000040419 ENSSTUG00000040514 ENSSTUG00000040538 BCL6B (ENSSTUG00000040579) SLC16A13 (ENSSTUG00000040627) ENSSTUG00000040660 acap1 (ENSSTUG00000040685) agfg2 (ENSSTUG00000040829) ENSSTUG00000040864 si:ch73-335l21.4 (ENSSTUG00000040890) dvl2 (ENSSTUG00000040929) ENSSTUG00000041643 ENSSTUG00000041708 ponzr1 (ENSSTUG00000041721) ENSSTUG00000041735 Oncorhynchus ANCESTRAL SPECIES 31 ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j.a ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00960000188752.b.a.a.b ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Oncorhynchus_a ANCESTRAL SPECIES 30 ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j.a ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00960000188752.b.a.a.b ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Chinook salmon MODERN SPECIES 1 dhx15 (ENSOTSG00005047193) PPARGC1A (ENSOTSG00005047184) gba3 (ENSOTSG00005047182) ADGRA3 (ENSOTSG00005047179) ENSOTSG00005047174 KCNIP4 (ENSOTSG00005047173) sec24d (ENSOTSG00005046997) ENSOTSG00005046991 MYOZ2 (ENSOTSG00005046989) USP53 (ENSOTSG00005046984) PTPRD (ENSOTSG00005024026) ENSOTSG00005023889 TYRP1 (ENSOTSG00005023884) MPDZ (ENSOTSG00005015616) cdk6 (ENSOTSG00005015574) ADGRL3 (ENSOTSG00005008372) ##22 ENSOTSG00005008304 ENSOTSG00005008295 ENSOTSG00005008294 ENSOTSG00005008291 SLC16A13 (ENSOTSG00005008287) acap1 (ENSOTSG00005002953) agfg2 (ENSOTSG00005002772) si:ch73-335l21.4 (ENSOTSG00005002763) ENSOTSG00005002753 dvl2 (ENSOTSG00005002746) ENSOTSG00005002743 ponzr1 (ENSOTSG00005002742) ENSOTSG00005002729 ENSOTSG00005002719 ENSOTSG00005002704 Coho salmon MODERN SPECIES 7 PPARGC1A (ENSOKIG00005023592) ENSOKIG00005023589 ENSOKIG00005023583 gba3 (ENSOKIG00005023578) ADGRA3 (ENSOKIG00005023469) ENSOKIG00005023401 KCNIP4 (ENSOKIG00005023368) sec24d (ENSOKIG00005018397) SYNPO2 (ENSOKIG00005018225) MYOZ2 (ENSOKIG00005018208) USP53 (ENSOKIG00005018165) PTPRD (ENSOKIG00005017112) TYRP1 (ENSOKIG00005016952) LURAP1L (ENSOKIG00005016940) MPDZ (ENSOKIG00005010909) ADGRL3 (ENSOKIG00005006122) ##22 ENSOKIG00005005786 ENSOKIG00005005518 ENSOKIG00005005458 ENSOKIG00005005451 ENSOKIG00005005445 ENSOKIG00005005442 SLC16A13 (ENSOKIG00005005433) acap1 (ENSOKIG00005005394) agfg2 (ENSOKIG00005005355) ENSOKIG00005005344 si:ch73-335l21.4 (ENSOKIG00005005335) dvl2 (ENSOKIG00005005303) ENSOKIG00005005280 ENSOKIG00005005274 ponzr1 (ENSOKIG00005005264) Rainbow trout MODERN SPECIES 30 ADGRA3 (ENSOMYG00000045348) ENSOMYG00000045316 KCNIP4 (ENSOMYG00000045307) sec24d (ENSOMYG00000044726) ENSOMYG00000044658 MYOZ2 (ENSOMYG00000044655) USP53 (ENSOMYG00000044651) ENSOMYG00000076736 ENSOMYG00000050015 PTPRD (ENSOMYG00000029183) ENSOMYG00000025863 TYRP1 (ENSOMYG00000025839) LURAP1L (ENSOMYG00000025827) MPDZ (ENSOMYG00000022089) ENSOMYG00000075032 ENSOMYG00000013446 ##22 ENSOMYG00000012761 ENSOMYG00000012701 ENSOMYG00000074378 ENSOMYG00000052636 ENSOMYG00000012672 ENSOMYG00000012661 acap1 (ENSOMYG00000010288) agfg2 (ENSOMYG00000009492) ENSOMYG00000009460 si:ch73-335l21.4 (ENSOMYG00000009419) dvl2 (ENSOMYG00000009408) ENSOMYG00000009372 ENSOMYG00000009340 ponzr1 (ENSOMYG00000009316) ENSOMYG00000056354 Huchen MODERN SPECIES 412 ENSHHUG00000014088 ##22 ENSHHUG00000015197 ENSHHUG00000016131 ENSHHUG00000016161 BCL6B (ENSHHUG00000016168) SLC16A13 (ENSHHUG00000016192) acap1 (ENSHHUG00000016201) agfg2 (ENSHHUG00000016247) ENSHHUG00000016288 si:ch73-335l21.4 (ENSHHUG00000016299) dvl2 (ENSHHUG00000016309) ENSHHUG00000016421 ponzr1 (ENSHHUG00000016423) ENSHHUG00000016432 Salmoninae ANCESTRAL SPECIES 2113 ENSGT00940000156348.B.j ENSGT00940000155527.j.a.f ##22 Huchen MODERN SPECIES 279 PTPRD (ENSHHUG00000030699) TYRP1 (ENSHHUG00000030797) LURAP1L (ENSHHUG00000030809) MPDZ (ENSHHUG00000030827) ENSHHUG00000031095 ENSHHUG00000031104 ENSHHUG00000031109 ##22 Osteoglossiformes ANCESTRAL SPECIES 60 ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00800000124172.i ENSGT00940000160640 ENSGT00940000156823.e.g ENSGT00510000047770.c.b ENSGT00940000156823.e.h.b ENSGT00390000017010 ENSGT00940000153617.D ENSGT00940000155804.k.a ENSGT00530000063790.b.g ENSGT00940000155586.B ENSGT00940000159617.b ENSGT00390000017890.b.b ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00950000182886.a.b Asian bonytongue MODERN SPECIES 20 DTX4 (ENSSFOG00015031699) coro1b (ENSSFOG00015012799) ENSSFOG00015025322 ACY3 (ENSSFOG00015012691) cldnd1a (ENSSFOG00015012670) ENSSFOG00015030155 ENSSFOG00015033008 ENSSFOG00015017277 CPZ (ENSSFOG00015017288) GPR78 (ENSSFOG00015017342) trmt44 (ENSSFOG00015017345) acox3 (ENSSFOG00015017377) ENSSFOG00015017448 ENSSFOG00015017481 DCTN6 (ENSSFOG00015017515) ADGRL3 (ENSSFOG00015017590) ##22 ENSSFOG00015032438 ENSSFOG00015030930 ENSSFOG00015017865 ENSSFOG00015017941 MPDZ (ENSSFOG00015018045) LURAP1L (ENSSFOG00015031107) TYRP1 (ENSSFOG00015018063) PTPRD (ENSSFOG00015018170) CAAP1 (ENSSFOG00015030065) elavl2 (ENSSFOG00015027679) DMRTA1 (ENSSFOG00015029453) FABP2 (ENSSFOG00015029809) ENSSFOG00015029766 USP53 (ENSSFOG00015018293) myoz2a (ENSSFOG00015018331) P. kingsleyae MODERN SPECIES 93 ENSPKIG00000006307 DMRTA1 (ENSPKIG00000006264) ENSPKIG00000006226 ELAVL2 (ENSPKIG00000006187) CAAP1 (ENSPKIG00000006115) PTPRD (ENSPKIG00000006054) TYRP1 (ENSPKIG00000006008) LURAP1L (ENSPKIG00000006002) ENSPKIG00000005990 ENSPKIG00000005955 ENSPKIG00000005930 ADGRL3 (ENSPKIG00000005620) ##22 ENSPKIG00000005072 ENSPKIG00000004882 DCTN6 (ENSPKIG00000004859) ENSPKIG00000004836 gtf2e2 (ENSPKIG00000004797) ENSPKIG00000004761 HTRA3 (ENSPKIG00000004725) acox3 (ENSPKIG00000004695) trmt44 (ENSPKIG00000004663) GPR78 (ENSPKIG00000004649) CPZ (ENSPKIG00000004602) hmx4 (ENSPKIG00000004560) hmx1 (ENSPKIG00000004577) ADRA2C (ENSPKIG00000004535) HGFAC (ENSPKIG00000004495) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Eupercaria ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Ballan wrasse MODERN SPECIES 283 PTPRD (ENSLBEG00000015424) TYRP1 (ENSLBEG00000015523) LURAP1L (ENSLBEG00000015547) ENSLBEG00000015565 ENSLBEG00000015614 ENSLBEG00000015655 ENSLBEG00000015684 ENSLBEG00000015725 ENSLBEG00000015775 ##22 ENSLBEG00000015803 Protacanthopterygii ANCESTRAL SPECIES 547 ENSGT00940000155527.i ##22 ENSGT00990000203806 Salmoninae ANCESTRAL SPECIES 1960 ENSGT00940000155527.i ##22 ENSGT00990000203806 Huchen MODERN SPECIES 9433 ENSHHUG00000039236 ##22 Salmoninae_a ANCESTRAL SPECIES 840 ENSGT00940000155527.i ##22 ENSGT00990000203806 Salmo ANCESTRAL SPECIES 687 ENSGT00940000155527.i ##22 ENSGT00990000203806 Atlantic salmon MODERN SPECIES 669 ENSSSAG00000086291 ##22 ENSSSAG00000116600 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 306 ENSOMYG00000058450 ##22 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ##22 ENSOMYG00000073461 ##22 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 ENSOMYG00000069257 ENSOMYG00000035779 ENSOMYG00000039760 #22 ENSOMYG00000059560 Otomorpha ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Otophysi ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Cyprininae ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Golden-line barbel MODERN SPECIES 2723 ENSSGRG00000011635 ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Denticle herring MODERN SPECIES 14 ENSDCDG00000010875 trmo (ENSDCDG00000010846) anp32b (ENSDCDG00000010827) coro2aa (ENSDCDG00000009914) hadh (ENSDCDG00000009873) cyp2u1 (ENSDCDG00000025568) ncapg (ENSDCDG00000025503) ENSDCDG00000025476 slit2 (ENSDCDG00000015357) ENSDCDG00000014993 ENSDCDG00000014992 ENSDCDG00000014990 ENSDCDG00000014989 ENSDCDG00000014987 ENSDCDG00000012784 #22 ENSDCDG00000012718 ##22 ENSDCDG00000012716 smim18 (ENSDCDG00000012713) gtf2e2 (ENSDCDG00000012709) FHIP1A (ENSDCDG00000012706) dctpp1 (ENSDCDG00000012705) gatb (ENSDCDG00000012096) ENSDCDG00000012049 FBXW7 (ENSDCDG00000010161) tmem154 (ENSDCDG00000010085) TMEM131L (ENSDCDG00000010061) mnd1 (ENSDCDG00000010031) trim2a (ENSDCDG00000008767) FHDC1 (ENSDCDG00000008683) arfip1 (ENSDCDG00000008645) sfrp2 (ENSDCDG00000008630) Spotted gar MODERN SPECIES 670 ENSLOCG00000013396 ptgr1.1 (ENSLOCG00000013391) txn (ENSLOCG00000013388) SVEP1 (ENSLOCG00000013366) ENSLOCG00000013359 ENSLOCG00000013356 ENSLOCG00000013352 ENSLOCG00000013350 smc2 (ENSLOCG00000013338) ecpas (ENSLOCG00000013324) kdm4c (ENSLOCG00000013308) PTPRD (ENSLOCG00000013272) TYRP1 (ENSLOCG00000013264) LURAP1L (ENSLOCG00000013262) MPDZ (ENSLOCG00000013247) ADGRL3 (ENSLOCG00000013236) #22 ENSLOCG00000013213 ENSLOCG00000013208 DCTN6 (ENSLOCG00000013206) RBPMS (ENSLOCG00000013199) gtf2e2 (ENSLOCG00000013191) ENSLOCG00000013178 pi4k2b (ENSLOCG00000013173) ENSLOCG00000013161 zcchc4 (ENSLOCG00000013153) pde5ab (ENSLOCG00000013138) ARSJ (ENSLOCG00000013135) camk2d1 (ENSLOCG00000013115) ANK2 (ENSLOCG00000013099) CLCN3 (ENSLOCG00000013089) hpf1 (ENSLOCG00000013083) Reedfish MODERN SPECIES 13 ENSECRG00000002879 tenm3 (ENSECRG00000002887) ENSECRG00000002892 ENSECRG00000002899 ENSECRG00000002907 aga (ENSECRG00000002913) BMPR1B (ENSECRG00000002928) pdlim5b (ENSECRG00000002952) ENSECRG00000002969 kcnv2b (ENSECRG00000002976) ints10 (ENSECRG00000002990) ENSECRG00000003004 vldlr (ENSECRG00000003060) gtf2e2 (ENSECRG00000003117) DCTN6 (ENSECRG00000003149) ADGRL3 (ENSECRG00000003173) #22 ENSECRG00000003191 ENSECRG00000003199 HPGDS (ENSECRG00000003206) atoh1a (ENSECRG00000003216) grid2 (ENSECRG00000003242) ENSECRG00000003274 cldne (ENSECRG00000003282) ENSECRG00000003291 ENSECRG00000003301 ENSECRG00000003313 SNCA (ENSECRG00000003319) ENSECRG00000003329 smim20 (ENSECRG00000003341) SEL1L3 (ENSECRG00000003357) ENSECRG00000003423 Sarcopterygii ANCESTRAL SPECIES 1008 ENSGT00940000155527 #22 ENSGT00990000203806 Coelacanth MODERN SPECIES 592 ADGRL3 (ENSLACG00000001437) #22 Tetrapoda ANCESTRAL SPECIES 478 ENSGT00940000155527 #22 ENSGT00990000203806 Anura ANCESTRAL SPECIES ENSGT00940000155527 #22 Leishan spiny toad MODERN SPECIES ARHGAP24 (ENSLLEG00000000396) MAPK10 (ENSLLEG00000000421) PTPN13 (ENSLLEG00000000491) ENSLLEG00000000677 AFF1 (ENSLLEG00000000695) KLHL8 (ENSLLEG00000000777) ENSLLEG00000000812 ENSLLEG00000000820 UBA6 (ENSLLEG00000000836) STAP1 (ENSLLEG00000000918) ENSLLEG00000001061 ENSLLEG00000001443 ENSLLEG00000001447 EPHA5 (ENSLLEG00000001539) ENSLLEG00000001848 ADGRL3 (ENSLLEG00000001945) #22 ENSLLEG00000002557 ENSLLEG00000002568 ENSLLEG00000002582 ENSLLEG00000002598 ENSLLEG00000002610 ENSLLEG00000002653 ENSLLEG00000002713 ENSLLEG00000002720 REST (ENSLLEG00000002772) ENSLLEG00000002868 POLR2B (ENSLLEG00000002886) ENSLLEG00000002945 ENSLLEG00000002956 ENSLLEG00000002967 ENSLLEG00000002995 Frog MODERN SPECIES ENSXETG00000049248 ENSXETG00000042272 kdm4b (ENSXETG00000005352) ENSXETG00000045127 ENSXETG00000046547 ENSXETG00000035871 ENSXETG00000044501 ENSXETG00000044789 ENSXETG00000042773 ENSXETG00000042582 ENSXETG00000043501 ENSXETG00000042511 ENSXETG00000045997 ENSXETG00000038581 ENSXETG00000047047 adgrl3 (ENSXETG00000037104) #22 ENSXETG00000043834 ENSXETG00000048090 uhrf1 (ENSXETG00000022306) ENSXETG00000045908 ENSXETG00000037401 ENSXETG00000021749 ENSXETG00000048396 ENSXETG00000048624 ENSXETG00000044309 fzr1 (ENSXETG00000006397) ENSXETG00000044729 ccng2 (ENSXETG00000006402) ENSXETG00000043469 ENSXETG00000039804 ENSXETG00000046961 Amniota ANCESTRAL SPECIES 85 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237 ENSGT00940000163094 ENSGT00940000155803 ENSGT00940000153212 ENSGT00940000161344 ENSGT00940000161848 ENSGT00940000162879 Mammalia ANCESTRAL SPECIES 1 ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212 Platypus MODERN SPECIES 1 PPP1R3B (ENSOANG00000015378) ERI1 (ENSOANG00000042020) MFHAS1 (ENSOANG00000037192) CLDN23 (ENSOANG00000048929) ENSOANG00000040268 ENSOANG00000008562 ENSOANG00000036201 ENSOANG00000044021 ENSOANG00000031517 HOPX (ENSOANG00000036960) ENSOANG00000047452 ENSOANG00000008887 NOA1 (ENSOANG00000000235) POLR2B (ENSOANG00000011212) IGFBP7 (ENSOANG00000038199) ADGRL3 (ENSOANG00000002221) #22 TECRL (ENSOANG00000001729) EPHA5 (ENSOANG00000003966) ENSOANG00000029652 ENSOANG00000003968 UBA6 (ENSOANG00000003969) GNRHR (ENSOANG00000003971) ENSOANG00000040547 TMPRSS11D (ENSOANG00000014141) TMPRSS11A (ENSOANG00000014140) ENSOANG00000003973 TMPRSS11F (ENSOANG00000015805) TMPRSS11B (ENSOANG00000014136) TMPRSS11E (ENSOANG00000012771) YTHDC1 (ENSOANG00000014398) ENSOANG00000045491 Theria ANCESTRAL SPECIES 6 ENSGT00960000187690 ENSGT00940000165267 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Marsupialia ANCESTRAL SPECIES 7 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Marsupialia_b ANCESTRAL SPECIES 8 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000003937.d ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Diprotodontia ANCESTRAL SPECIES 10 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00940000164461 ENSGT00390000003937.d ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Diprotodontia_a ANCESTRAL SPECIES 12 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000003937.d ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Common wonbat MODERN SPECIES 1054 PPAT (ENSVURG00010011041) ENSVURG00010011053 ENSVURG00010011086 ENSVURG00010011094 SRP72 (ENSVURG00010011102) ENSVURG00010011122 ENSVURG00010011142 HOPX (ENSVURG00010011162) ENSVURG00010011181 NOA1 (ENSVURG00010011188) POLR2B (ENSVURG00010011199) IGFBP7 (ENSVURG00010011257) ENSVURG00010011269 ENSVURG00010011276 ENSVURG00010011288 ADGRL3 (ENSVURG00010011324) #22 ENSVURG00010011392 TECRL (ENSVURG00010011429) ENSVURG00010011443 ENSVURG00010011449 EPHA5 (ENSVURG00010011493) ENSVURG00010012092 ENSVURG00010012110 ENSVURG00010012121 ENSVURG00010012132 STAP1 (ENSVURG00010012147) UBA6 (ENSVURG00010012161) GNRHR (ENSVURG00010012187) TMPRSS11D (ENSVURG00010012197) TMPRSS11A (ENSVURG00010012208) ENSVURG00010012220 koala MODERN SPECIES 78 ENSPCIG00000033025 ENSPCIG00000017312 ENSPCIG00000017313 ENSPCIG00000030798 ADGRL3 (ENSPCIG00000017414) #22 ENSPCIG00000012461 TECRL (ENSPCIG00000006772) ENSPCIG00000024024 ENSPCIG00000024026 EPHA5 (ENSPCIG00000024027) ENSPCIG00000012623 STAP1 (ENSPCIG00000012621) UBA6 (ENSPCIG00000002425) GNRHR (ENSPCIG00000001816) ENSPCIG00000001778 TMPRSS11D (ENSPCIG00000001625) TMPRSS11A (ENSPCIG00000001569) TMPRSS11F (ENSPCIG00000019073) ENSPCIG00000031850 TMPRSS11B (ENSPCIG00000006614) Wallaby MODERN SPECIES 5663 ADGRL3 (ENSMEUG00000006550) #22 Tasmanian devil MODERN SPECIES 5 EXOC1 (ENSSHAG00000009279) CEP135 (ENSSHAG00000008361) CRACD (ENSSHAG00000026554) AASDH (ENSSHAG00000004611) ENSSHAG00000002861 ENSSHAG00000001748 SRP72 (ENSSHAG00000028812) ENSSHAG00000020703 ENSSHAG00000003724 ENSSHAG00000000263 ENSSHAG00000029827 ENSSHAG00000028479 NOA1 (ENSSHAG00000022053) POLR2B (ENSSHAG00000016080) IGFBP7 (ENSSHAG00000026079) ADGRL3 (ENSSHAG00000010680) #22 TECRL (ENSSHAG00000029045) EPHA5 (ENSSHAG00000017029) ENSSHAG00000009376 STAP1 (ENSSHAG00000008776) UBA6 (ENSSHAG00000008202) GNRHR (ENSSHAG00000007827) ENSSHAG00000006941 TMPRSS11D (ENSSHAG00000005958) TMPRSS11A (ENSSHAG00000004633) ENSSHAG00000003053 ENSSHAG00000001608 ENSSHAG00000007228 ENSSHAG00000005256 ENSSHAG00000002538 ENSSHAG00000023018 Opossum MODERN SPECIES 4 ENSMODG00000040797 PPAT (ENSMODG00000020693) PAICS (ENSMODG00000020695) SRP72 (ENSMODG00000020697) ARL9 (ENSMODG00000020699) ENSMODG00000037967 HOPX (ENSMODG00000043154) ENSMODG00000039066 REST (ENSMODG00000038825) ENSMODG00000044705 NOA1 (ENSMODG00000020703) POLR2B (ENSMODG00000020704) IGFBP7 (ENSMODG00000020706) ENSMODG00000047487 ENSMODG00000036521 ADGRL3 (ENSMODG00000020724) #22 ENSMODG00000029274 TECRL (ENSMODG00000020727) ENSMODG00000048055 EPHA5 (ENSMODG00000020730) ENSMODG00000011762 ENSMODG00000020735 STAP1 (ENSMODG00000020737) UBA6 (ENSMODG00000020740) GNRHR (ENSMODG00000020742) ENSMODG00000020743 ENSMODG00000028644 TMPRSS11D (ENSMODG00000020744) TMPRSS11A (ENSMODG00000020746) ENSMODG00000020749 TMPRSS11F (ENSMODG00000020750) Eutheria ANCESTRAL SPECIES 2 ENSGT00960000187690 ENSGT00940000165267 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Atlantogenata ANCESTRAL SPECIES 25 ENSGT00940000159453 ENSGT00940000168854 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264 ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000163930 Afrotheria ANCESTRAL SPECIES 78 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000168854 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264 ENSGT00940000159397 ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h ENSGT00940000158332 Afrotheria_a ANCESTRAL SPECIES 77 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000168854 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264 ENSGT00940000159397 ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h ENSGT00940000158332 Elephant MODERN SPECIES 363 ENSLAFG00000028568 ENSLAFG00000015907 ENSLAFG00000018286 AASDH (ENSLAFG00000018295) PPAT (ENSLAFG00000018301) ENSLAFG00000032377 PAICS (ENSLAFG00000021456) SRP72 (ENSLAFG00000018307) ARL9 (ENSLAFG00000012646) HOPX (ENSLAFG00000031146) REST (ENSLAFG00000003195) NOA1 (ENSLAFG00000003197) POLR2B (ENSLAFG00000003198) IGFBP7 (ENSLAFG00000021499) ENSLAFG00000018654 ADGRL3 (ENSLAFG00000009854) #22 ENSLAFG00000029856 TECRL (ENSLAFG00000001928) EPHA5 (ENSLAFG00000010504) ENSLAFG00000026186 CENPC (ENSLAFG00000011524) STAP1 (ENSLAFG00000030131) UBA6 (ENSLAFG00000005519) GNRHR (ENSLAFG00000005648) TMPRSS11D (ENSLAFG00000005780) TMPRSS11A (ENSLAFG00000021522) ENSLAFG00000031323 TMPRSS11F (ENSLAFG00000017802) ENSLAFG00000012761 TMPRSS11E (ENSLAFG00000009861) YTHDC1 (ENSLAFG00000021592) Hyrax MODERN SPECIES 3715 ENSPCAG00000010275 #22 Tenrec MODERN SPECIES 4442 ADGRL3 (ENSETEG00000013055) #22 Xenarthra ANCESTRAL SPECIES 1759 ENSGT00940000155527 #22 ENSGT00950000182886.a.b Sloth MODERN SPECIES 4060 ADGRL3 (ENSCHOG00000005781) #22 Armadillo MODERN SPECIES 1403 ENSDNOG00000034717 ENSDNOG00000035086 ENSDNOG00000047824 ENSDNOG00000031851 ENSDNOG00000042242 ENSDNOG00000033116 ADGRL3 (ENSDNOG00000007471) #22 TECRL (ENSDNOG00000008713) ENSDNOG00000046958 ENSDNOG00000042105 Boreoeutheria ANCESTRAL SPECIES 8 ENSGT00940000165267 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Euarchontoglires ANCESTRAL SPECIES 9 ENSGT00960000187690 ENSGT00940000165267 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Euarchontoglires_A ANCESTRAL SPECIES 9 ENSGT00960000187690 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Tree shrew MODERN SPECIES 2469 ADGRL3 (ENSTBEG00000012056) #22 Glires ANCESTRAL SPECIES 8 ENSGT00960000187690 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Rodentia ANCESTRAL SPECIES 13 ENSGT00960000187690 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Rodentia_B ANCESTRAL SPECIES 19 ENSGT00940000165267 ENSGT00940000169459 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Kangaroo rat MODERN SPECIES 327 ENSDORG00000027747 ENSDORG00000025512 ENSDORG00000028255 Ppat (ENSDORG00000000166) Paics (ENSDORG00000000167) Srp72 (ENSDORG00000000171) Arl9 (ENSDORG00000012801) ENSDORG00000024918 ENSDORG00000027961 ENSDORG00000029054 ENSDORG00000029342 Polr2b (ENSDORG00000010077) Igfbp7 (ENSDORG00000010082) ENSDORG00000024559 ENSDORG00000026029 Adgrl3 (ENSDORG00000014644) #22 ENSDORG00000024580 Tecrl (ENSDORG00000004959) Epha5 (ENSDORG00000012214) ENSDORG00000006165 Stap1 (ENSDORG00000006168) Uba6 (ENSDORG00000012223) Gnrhr (ENSDORG00000012296) Tmprss11c (ENSDORG00000026233) Tmprss11d (ENSDORG00000000830) Tmprss11a (ENSDORG00000012858) Tmprss11g (ENSDORG00000023358) Tmprss11f (ENSDORG00000001172) Tmprss11b (ENSDORG00000028800) Tmprss11e (ENSDORG00000001199) Ythdc1 (ENSDORG00000013045) Myomorpha ANCESTRAL SPECIES 19 ENSGT00940000165267 ENSGT00940000169459 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Muroidea ANCESTRAL SPECIES 17 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Muroidea_A ANCESTRAL SPECIES 13 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.h.b Cricetidae ANCESTRAL SPECIES 14 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172.f ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Cricetinae ANCESTRAL SPECIES 9 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172.f ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g.e Chinese hamster chok1gshd MODERN SPECIES 44 Ppat (ENSCGRG00001020260) ENSCGRG00001022669 Srp72 (ENSCGRG00001013548) Arl9 (ENSCGRG00001025054) Thegl (ENSCGRG00001000567) Hopx (ENSCGRG00001009595) Spink2 (ENSCGRG00001000790) ENSCGRG00001014440 Noa1 (ENSCGRG00001019606) Polr2b (ENSCGRG00001021842) Igfbp7 (ENSCGRG00001019536) ENSCGRG00001012516 ENSCGRG00001001829 ENSCGRG00001007317 ENSCGRG00001017304 Adgrl3 (ENSCGRG00001014982) #22 ENSCGRG00001012879 Tecrl (ENSCGRG00001016746) ENSCGRG00001003991 Epha5 (ENSCGRG00001009929) ENSCGRG00001001613 Cenpc1 (ENSCGRG00001015797) Stap1 (ENSCGRG00001021063) Uba6 (ENSCGRG00001007962) ENSCGRG00001016191 Gnrhr (ENSCGRG00001000278) Tmprss11c (ENSCGRG00001005492) Tmprss11d (ENSCGRG00001024644) Tmprss11a (ENSCGRG00001024889) Tmprss11g (ENSCGRG00001004910) Tmprss11f (ENSCGRG00001015940) Golden Hamster MODERN SPECIES 629 ENSMAUG00000008706 Rbm11 (ENSMAUG00000008588) Hspa13 (ENSMAUG00000003525) Samsn1 (ENSMAUG00000000826) Nrip1 (ENSMAUG00000000474) Usp25 (ENSMAUG00000015146) Cxadr (ENSMAUG00000013707) Btg3 (ENSMAUG00000013141) D16Ertd472e (ENSMAUG00000012034) Chodl (ENSMAUG00000008824) Tmprss15 (ENSMAUG00000011267) Ncam2 (ENSMAUG00000009917) ENSMAUG00000017714 Adgrl3 (ENSMAUG00000019103) #22 ENSMAUG00000017722 Tecrl (ENSMAUG00000012149) Epha5 (ENSMAUG00000007678) ENSMAUG00000017798 Cenpc1 (ENSMAUG00000008861) Tmprss11c (ENSMAUG00000008409) Tmprss11d (ENSMAUG00000014170) Tmprss11a (ENSMAUG00000005780) Tmprss11g (ENSMAUG00000016064) Tmprss11f (ENSMAUG00000010965) Tmprss11b (ENSMAUG00000003761) Tmprss11e (ENSMAUG00000020697) Ythdc1 (ENSMAUG00000001286) ENSMAUG00000000392 ENSMAUG00000020810 Cricetidae_B ANCESTRAL SPECIES 9 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172.f ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Prairie vole MODERN SPECIES 349 Csn3 (ENSMOCG00000012624) Odam (ENSMOCG00000017908) Prr27 (ENSMOCG00000010640) ENSMOCG00000014285 Csn1s2a (ENSMOCG00000014802) Csn2 (ENSMOCG00000010917) Csn1s1 (ENSMOCG00000009437) Sult1e1 (ENSMOCG00000002503) Sult1d1 (ENSMOCG00000009914) Sult1b1 (ENSMOCG00000006557) Ugt2a1 (ENSMOCG00000002170) Ugt2a3 (ENSMOCG00000010242) ENSMOCG00000000280 ENSMOCG00000014717 ENSMOCG00000001894 Adgrl3 (ENSMOCG00000006667) #22 Tecrl (ENSMOCG00000017572) Epha5 (ENSMOCG00000022283) Cenpc1 (ENSMOCG00000000468) Stap1 (ENSMOCG00000009916) Uba6 (ENSMOCG00000002005) Gnrhr (ENSMOCG00000007348) Tmprss11c (ENSMOCG00000002389) Tmprss11d (ENSMOCG00000007719) Tmprss11a (ENSMOCG00000022135) Tmprss11g (ENSMOCG00000022217) Tmprss11f (ENSMOCG00000014404) Tmprss11b (ENSMOCG00000012773) Tmprss11e (ENSMOCG00000013356) Ythdc1 (ENSMOCG00000020201) ENSMOCG00000000333 Northern American deer mouse MODERN SPECIES 1 Exoc1 (ENSPEMG00000014937) Cep135 (ENSPEMG00000012282) Cracd (ENSPEMG00000010216) Aasdh (ENSPEMG00000011196) Ppat (ENSPEMG00000016464) ENSPEMG00000001745 Srp72 (ENSPEMG00000012828) Arl9 (ENSPEMG00000005278) Thegl (ENSPEMG00000001037) Hopx (ENSPEMG00000029207) Spink2 (ENSPEMG00000020830) ENSPEMG00000020669 Noa1 (ENSPEMG00000020457) Polr2b (ENSPEMG00000021804) Igfbp7 (ENSPEMG00000022355) Adgrl3 (ENSPEMG00000005785) #22 Tecrl (ENSPEMG00000023350) Epha5 (ENSPEMG00000005854) ENSPEMG00000025741 Sult1d1 (ENSPEMG00000012616) Sult1b1 (ENSPEMG00000003161) Ugt2a2 (ENSPEMG00000019040) Ugt2a3 (ENSPEMG00000010984) ENSPEMG00000027068 ENSPEMG00000007516 ENSPEMG00000010907 ENSPEMG00000018325 ENSPEMG00000010964 ENSPEMG00000017890 Ugt2b1 (ENSPEMG00000012901) ENSPEMG00000017153 Murinae ANCESTRAL SPECIES 12 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Mus ANCESTRAL SPECIES 14 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Mus_A ANCESTRAL SPECIES 6 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.c ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g.g Mus_B ANCESTRAL SPECIES 4 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.c ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g.g Mus_C ANCESTRAL SPECIES 4 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.c ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g.g Steppe mouse MODERN SPECIES 2999 Adgrl3 (ENSMSIG00000019362) #22 spretus MODERN SPECIES 14 Exoc1 (MGP_SPRETEiJ_G0028311) Cep135 (MGP_SPRETEiJ_G0028312) Cracd (MGP_SPRETEiJ_G0028313) MGP_SPRETEiJ_G0028314 Ppat (MGP_SPRETEiJ_G0028315) MGP_SPRETEiJ_G0028316 Srp72 (MGP_SPRETEiJ_G0028317) Arl9 (MGP_SPRETEiJ_G0028318) Thegl (MGP_SPRETEiJ_G0028319) Hopx (MGP_SPRETEiJ_G0028320) Spink2 (MGP_SPRETEiJ_G0028321) Rest (MGP_SPRETEiJ_G0028322) Noa1 (MGP_SPRETEiJ_G0028323) Polr2b (MGP_SPRETEiJ_G0028324) Igfbp7 (MGP_SPRETEiJ_G0028325) Adgrl3 (MGP_SPRETEiJ_G0028326) #22 Tecrl (MGP_SPRETEiJ_G0028327) Epha5 (MGP_SPRETEiJ_G0028328) Cenpc1 (MGP_SPRETEiJ_G0028329) Stap1 (MGP_SPRETEiJ_G0028330) Uba6 (MGP_SPRETEiJ_G0028331) Gnrhr (MGP_SPRETEiJ_G0028332) Tmprss11c (MGP_SPRETEiJ_G0028333) Tmprss11a (MGP_SPRETEiJ_G0028334) Tmprss11g (MGP_SPRETEiJ_G0028335) Tmprss11f (MGP_SPRETEiJ_G0028336) Tmprss11b (MGP_SPRETEiJ_G0028337) Tmprss11e (MGP_SPRETEiJ_G0028338) Ythdc1 (MGP_SPRETEiJ_G0028339) Ugt2b34 (MGP_SPRETEiJ_G0028340) Ugt2b1 (MGP_SPRETEiJ_G0028341) Mouse MODERN SPECIES 14 Exoc1 (ENSMUSG00000036435) Cep135 (ENSMUSG00000036403) Cracd (ENSMUSG00000036377) Aasdh (ENSMUSG00000055923) Ppat (ENSMUSG00000029246) Paics (ENSMUSG00000029247) Srp72 (ENSMUSG00000036323) Arl9 (ENSMUSG00000063820) Thegl (ENSMUSG00000029248) Hopx (ENSMUSG00000059325) Spink2 (ENSMUSG00000053030) Rest (ENSMUSG00000029249) Noa1 (ENSMUSG00000036285) Polr2b (ENSMUSG00000029250) Igfbp7 (ENSMUSG00000036256) Adgrl3 (ENSMUSG00000037605) #22 1700031L13Rik (ENSMUSG00000099863) Tecrl (ENSMUSG00000049537) Epha5 (ENSMUSG00000029245) Cenpc1 (ENSMUSG00000029253) Stap1 (ENSMUSG00000029254) Uba6 (ENSMUSG00000035898) Gnrhr (ENSMUSG00000029255) Tmprss11c (ENSMUSG00000061184) Tmprss11d (ENSMUSG00000061259) Tmprss11a (ENSMUSG00000072845) Tmprss11g (ENSMUSG00000079451) Tmprss11f (ENSMUSG00000048764) Tmprss11b (ENSMUSG00000035861) Tmprss11e (ENSMUSG00000054537) Ythdc1 (ENSMUSG00000035851) Ryukyu mouse MODERN SPECIES 14 Exoc1 (MGP_CAROLIEiJ_G0027317) Cep135 (MGP_CAROLIEiJ_G0027318) Cracd (MGP_CAROLIEiJ_G0027319) Aasdh (MGP_CAROLIEiJ_G0027320) Ppat (MGP_CAROLIEiJ_G0027321) Paics (MGP_CAROLIEiJ_G0027322) Srp72 (MGP_CAROLIEiJ_G0027323) Arl9 (MGP_CAROLIEiJ_G0027324) Thegl (MGP_CAROLIEiJ_G0027325) Hopx (MGP_CAROLIEiJ_G0027326) Spink2 (MGP_CAROLIEiJ_G0027327) Noa1 (MGP_CAROLIEiJ_G0027328) Polr2b (MGP_CAROLIEiJ_G0027329) Igfbp7 (MGP_CAROLIEiJ_G0027330) MGP_CAROLIEiJ_G0027331 Adgrl3 (MGP_CAROLIEiJ_G0027333) #22 Tecrl (MGP_CAROLIEiJ_G0027334) Epha5 (MGP_CAROLIEiJ_G0027335) Cenpc1 (MGP_CAROLIEiJ_G0027336) Stap1 (MGP_CAROLIEiJ_G0027337) Uba6 (MGP_CAROLIEiJ_G0027338) Gnrhr (MGP_CAROLIEiJ_G0027339) Tmprss11c (MGP_CAROLIEiJ_G0027340) Tmprss11d (MGP_CAROLIEiJ_G0027341) Tmprss11a (MGP_CAROLIEiJ_G0027342) Tmprss11g (MGP_CAROLIEiJ_G0027343) Tmprss11f (MGP_CAROLIEiJ_G0027344) Tmprss11b (MGP_CAROLIEiJ_G0027345) Tmprss11e (MGP_CAROLIEiJ_G0027346) Ythdc1 (MGP_CAROLIEiJ_G0027347) Ugt2b34 (MGP_CAROLIEiJ_G0027348) Shrew mouse MODERN SPECIES 4 Exoc1 (MGP_PahariEiJ_G0017097) Cep135 (MGP_PahariEiJ_G0017098) MGP_PahariEiJ_G0017099 Aasdh (MGP_PahariEiJ_G0017100) Ppat (MGP_PahariEiJ_G0017101) Paics (MGP_PahariEiJ_G0017102) Srp72 (MGP_PahariEiJ_G0017103) Arl9 (MGP_PahariEiJ_G0017104) Thegl (MGP_PahariEiJ_G0017105) Hopx (MGP_PahariEiJ_G0017106) Spink2 (MGP_PahariEiJ_G0017107) Rest (MGP_PahariEiJ_G0017108) Noa1 (MGP_PahariEiJ_G0017109) Polr2b (MGP_PahariEiJ_G0017110) Igfbp7 (MGP_PahariEiJ_G0017111) Adgrl3 (MGP_PahariEiJ_G0017112) #22 Tecrl (MGP_PahariEiJ_G0017113) Epha5 (MGP_PahariEiJ_G0017114) Cenpc1 (MGP_PahariEiJ_G0017115) Stap1 (MGP_PahariEiJ_G0017116) Uba6 (MGP_PahariEiJ_G0017117) Gnrhr (MGP_PahariEiJ_G0017118) Tmprss11c (MGP_PahariEiJ_G0017119) Tmprss11d (MGP_PahariEiJ_G0017120) Tmprss11a (MGP_PahariEiJ_G0017121) Tmprss11g (MGP_PahariEiJ_G0017122) Tmprss11f (MGP_PahariEiJ_G0017123) Tmprss11b (MGP_PahariEiJ_G0017124) Tmprss11e (MGP_PahariEiJ_G0017125) Ythdc1 (MGP_PahariEiJ_G0017126) MGP_PahariEiJ_G0017127 Rat MODERN SPECIES 5 Cep135 (ENSRNOG00000002153) Cracd (ENSRNOG00000002139) Aasdh (ENSRNOG00000002137) Ppat (ENSRNOG00000002128) Paics (ENSRNOG00000002101) LOC108348180 (ENSRNOG00000002100) Arl9 (ENSRNOG00000029628) Thegl (ENSRNOG00000002085) Hopx (ENSRNOG00000024689) Spink2 (ENSRNOG00000066503) Rest (ENSRNOG00000002074) Noa1 (ENSRNOG00000002055) Polr2b (ENSRNOG00000024779) Igfbp7 (ENSRNOG00000002050) RGD1561589 (ENSRNOG00000024829) Adgrl3 (ENSRNOG00000030149) #22 1700031L13Rik (ENSRNOG00000062941) ENSRNOG00000069695 ENSRNOG00000069801 Tecrl (ENSRNOG00000001912) Epha5 (ENSRNOG00000002024) AABR07014676.1 (ENSRNOG00000033207) ENSRNOG00000068319 ENSRNOG00000063582 Cenpc (ENSRNOG00000021776) Stap1 (ENSRNOG00000002014) Uba6 (ENSRNOG00000021931) Gnrhr (ENSRNOG00000002011) Tmprss11c (ENSRNOG00000033910) Tmprss11d (ENSRNOG00000055991) Tmprss11a (ENSRNOG00000046764) Upper Galilee mountains blind mole rat MODERN SPECIES 842 ENSNGAG00000022499 ENSNGAG00000011459 Ppat (ENSNGAG00000003683) Paics (ENSNGAG00000014177) Srp72 (ENSNGAG00000012595) Arl9 (ENSNGAG00000008945) Thegl (ENSNGAG00000019380) Hopx (ENSNGAG00000005421) Spink2 (ENSNGAG00000012319) ENSNGAG00000010453 Noa1 (ENSNGAG00000017239) Polr2b (ENSNGAG00000014884) Igfbp7 (ENSNGAG00000001863) ENSNGAG00000016385 ENSNGAG00000016006 Adgrl3 (ENSNGAG00000011131) #22 ENSNGAG00000006523 Tecrl (ENSNGAG00000011287) Epha5 (ENSNGAG00000016132) Lesser Egyptian jerboa MODERN SPECIES 118 Exoc1l (ENSJJAG00000012422) Cep135 (ENSJJAG00000008680) ENSJJAG00000022354 ENSJJAG00000020557 ENSJJAG00000006915 Ppat (ENSJJAG00000018540) Paics (ENSJJAG00000016134) Srp72 (ENSJJAG00000018324) Arl9 (ENSJJAG00000015666) ENSJJAG00000019551 Hopx (ENSJJAG00000018575) ENSJJAG00000020133 Noa1 (ENSJJAG00000014213) Polr2b (ENSJJAG00000016101) Igfbp7 (ENSJJAG00000007944) Adgrl3 (ENSJJAG00000023649) #22 Tecrl (ENSJJAG00000015863) ENSJJAG00000014812 Epha5 (ENSJJAG00000023323) ENSJJAG00000019375 Stap1 (ENSJJAG00000013695) Uba6 (ENSJJAG00000022858) Gnrhr (ENSJJAG00000015514) Tmprss11c (ENSJJAG00000016784) Tmprss11d (ENSJJAG00000012408) Tmprss11a (ENSJJAG00000022846) Tmprss11g (ENSJJAG00000017041) Tmprss11f (ENSJJAG00000023750) Tmprss11b (ENSJJAG00000014306) Tmprss11e (ENSJJAG00000010571) Ythdc1 (ENSJJAG00000010268) Rodentia_A ANCESTRAL SPECIES 20 ENSGT01030000238073 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Hystricomorpha ANCESTRAL SPECIES 26 ENSGT00940000165267 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000167102 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Hystricomorpha_a ANCESTRAL SPECIES 23 ENSGT00940000159453 ENSGT01030000238073 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000167102 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.g Hystricomorpha_b ANCESTRAL SPECIES 76 ENSGT00940000162193 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.h.a.c.a.a Long-tailed chinchilla MODERN SPECIES 154 ENSCLAG00000006063 ENSCLAG00000005580 AASDH (ENSCLAG00000005208) ENSCLAG00000004994 PPAT (ENSCLAG00000004229) PAICS (ENSCLAG00000005063) SRP72 (ENSCLAG00000003571) ENSCLAG00000003219 ENSCLAG00000003121 ENSCLAG00000005736 ENSCLAG00000017609 ENSCLAG00000004630 NOA1 (ENSCLAG00000008077) POLR2B (ENSCLAG00000005440) IGFBP7 (ENSCLAG00000004993) ADGRL3 (ENSCLAG00000004693) #22 TECRL (ENSCLAG00000004682) EPHA5 (ENSCLAG00000006801) CENPC (ENSCLAG00000005469) STAP1 (ENSCLAG00000004356) UBA6 (ENSCLAG00000011298) GNRHR (ENSCLAG00000005757) ENSCLAG00000004102 TMPRSS11D (ENSCLAG00000003798) TMPRSS11A (ENSCLAG00000003283) ENSCLAG00000004672 TMPRSS11F (ENSCLAG00000004062) ENSCLAG00000003989 TMPRSS11E (ENSCLAG00000003193) YTHDC1 (ENSCLAG00000005482) ENSCLAG00000004845 Degu MODERN SPECIES 213 ENSODEG00000002437 ADGRL3 (ENSODEG00000002056) #22 ENSODEG00000018715 ENSODEG00000001751 ENSODEG00000018732 Guinea pig MODERN SPECIES 24 CEP135 (ENSCPOG00000003212) ENSCPOG00000000214 ENSCPOG00000040605 AASDH (ENSCPOG00000000215) PPAT (ENSCPOG00000000216) ENSCPOG00000010749 SRP72 (ENSCPOG00000000218) ENSCPOG00000000220 THEGL (ENSCPOG00000030344) HOPX (ENSCPOG00000032872) ENSCPOG00000038446 ENSCPOG00000014066 NOA1 (ENSCPOG00000031454) POLR2B (ENSCPOG00000013006) IGFBP7 (ENSCPOG00000024650) ADGRL3 (ENSCPOG00000010490) #22 Naked mole-rat female MODERN SPECIES 1 ENSHGLG00000041011 ENSHGLG00000008232 ENSHGLG00000042197 ENSHGLG00000004295 ENSHGLG00000036836 ENSHGLG00000005916 NOA1 (ENSHGLG00000006204) ENSHGLG00000011712 IGFBP7 (ENSHGLG00000008997) ENSHGLG00000037745 ENSHGLG00000008002 ENSHGLG00000050335 ENSHGLG00000033518 ENSHGLG00000045566 ENSHGLG00000035797 ENSHGLG00000015819 #22 ENSHGLG00000020813 ENSHGLG00000048842 ENSHGLG00000046668 ENSHGLG00000034735 ENSHGLG00000014081 ENSHGLG00000006990 ENSHGLG00000019964 ENSHGLG00000040178 ENSHGLG00000042667 ENSHGLG00000015721 ENSHGLG00000043724 ENSHGLG00000021126 ENSHGLG00000040781 ENSHGLG00000037098 STAP1 (ENSHGLG00000019321) Sciuridae ANCESTRAL SPECIES 19 ENSGT01030000238073 ENSGT00940000165267 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Eurasian red squirrel MODERN SPECIES 18 ENSSVLG00005020514 CRACD (ENSSVLG00005020021) AASDH (ENSSVLG00005019805) ENSSVLG00005019738 PPAT (ENSSVLG00005019646) ENSSVLG00005019565 SRP72 (ENSSVLG00005019460) ARL9 (ENSSVLG00005019282) THEGL (ENSSVLG00005019068) HOPX (ENSSVLG00005019020) ENSSVLG00005018966 REST (ENSSVLG00005018896) NOA1 (ENSSVLG00005018806) POLR2B (ENSSVLG00005018501) IGFBP7 (ENSSVLG00005018424) ADGRL3 (ENSSVLG00005014662) #22 ENSSVLG00005013805 ENSSVLG00005013726 ENSSVLG00005013679 ENSSVLG00005013574 TECRL (ENSSVLG00005013260) ENSSVLG00005013082 EPHA5 (ENSSVLG00005011847) ENSSVLG00005011711 ENSSVLG00005011659 CENPC (ENSSVLG00005011404) STAP1 (ENSSVLG00005011286) UBA6 (ENSSVLG00005025549) GNRHR (ENSSVLG00005025536) ENSSVLG00005025527 TMPRSS11D (ENSSVLG00005025516) Marmotini ANCESTRAL SPECIES 26 ENSGT00940000159453.e.a ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Alpin marmot MODERN SPECIES 9 ENSMMMG00000021211 PAICS (ENSMMMG00000021214) SRP72 (ENSMMMG00000021224) ARL9 (ENSMMMG00000021256) THEGL (ENSMMMG00000021263) HOPX (ENSMMMG00000021270) ENSMMMG00000021272 REST (ENSMMMG00000021279) NOA1 (ENSMMMG00000021281) ENSMMMG00000021288 IGFBP7 (ENSMMMG00000021298) ENSMMMG00000021305 ENSMMMG00000021314 ENSMMMG00000021320 ENSMMMG00000021325 ADGRL3 (ENSMMMG00000021356) #22 ENSMMMG00000022830 ENSMMMG00000022835 TECRL (ENSMMMG00000022840) ENSMMMG00000022845 ENSMMMG00000022846 EPHA5 (ENSMMMG00000022872) ENSMMMG00000023020 CENPC (ENSMMMG00000023034) STAP1 (ENSMMMG00000023059) UBA6 (ENSMMMG00000023074) GNRHR (ENSMMMG00000023093) ENSMMMG00000023096 TMPRSS11D (ENSMMMG00000023100) TMPRSS11A (ENSMMMG00000023105) ENSMMMG00000023107 Marmotini_b ANCESTRAL SPECIES 205 ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00390000012029.n ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 Arctic ground squirrel MODERN SPECIES 148 ADGRL3 (ENSUPAG00010021352) #22 ENSUPAG00010023039 TECRL (ENSUPAG00010023041) ENSUPAG00010023042 EPHA5 (ENSUPAG00010023050) Squirrel MODERN SPECIES 182 ADGRL3 (ENSSTOG00000008157) #22 TECRL (ENSSTOG00000025080) EPHA5 (ENSSTOG00000011670) CENPC (ENSSTOG00000011750) STAP1 (ENSSTOG00000013018) UBA6 (ENSSTOG00000027809) GNRHR (ENSSTOG00000023714) ENSSTOG00000021304 TMPRSS11D (ENSSTOG00000000309) TMPRSS11A (ENSSTOG00000025512) ENSSTOG00000028804 TMPRSS11F (ENSSTOG00000008912) ENSSTOG00000024638 ENSSTOG00000033507 TMPRSS11E (ENSSTOG00000028976) YTHDC1 (ENSSTOG00000013652) Lagomorpha ANCESTRAL SPECIES 106 ENSGT00510000048726 ENSGT00940000162193 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h.h.a.a.a Pika MODERN SPECIES 2152 ADGRL3 (ENSOPRG00000001648) #22 Rabbit MODERN SPECIES 6 CRACD (ENSOCUG00000012185) AASDH (ENSOCUG00000012192) ENSOCUG00000036591 PPAT (ENSOCUG00000012201) PAICS (ENSOCUG00000012216) SRP72 (ENSOCUG00000012226) ENSOCUG00000021344 THEGL (ENSOCUG00000033811) HOPX (ENSOCUG00000005107) REST (ENSOCUG00000001776) NOA1 (ENSOCUG00000016330) POLR2B (ENSOCUG00000016353) ENSOCUG00000036880 ENSOCUG00000036939 ENSOCUG00000022796 ADGRL3 (ENSOCUG00000001910) #22 ENSOCUG00000031914 TECRL (ENSOCUG00000014558) ENSOCUG00000017595 ENSOCUG00000038529 ENSOCUG00000031301 ENSOCUG00000033094 CENPC (ENSOCUG00000008151) STAP1 (ENSOCUG00000008157) UBA6 (ENSOCUG00000012827) GNRHR (ENSOCUG00000016998) ENSOCUG00000022598 TMPRSS11D (ENSOCUG00000024745) TMPRSS11A (ENSOCUG00000012626) ENSOCUG00000022549 TMPRSS11F (ENSOCUG00000004720) Primates ANCESTRAL SPECIES 10 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000155803 Strepsirrhini ANCESTRAL SPECIES 18 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.g ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 Lemuriformes ANCESTRAL SPECIES 39 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.g ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 Mouse lemur MODERN SPECIES 18 GABRA4 (ENSMICG00000017780) ENSMICG00000044722 ENSMICG00000007853 GABRA2 (ENSMICG00000013839) GABRG1 (ENSMICG00000007419) GNPDA2 (ENSMICG00000029668) GUF1 (ENSMICG00000016714) YIPF7 (ENSMICG00000016710) ENSMICG00000036268 GRXCR1 (ENSMICG00000044927) ADGRL3 (ENSMICG00000005071) #22 TECRL (ENSMICG00000002253) ENSMICG00000028145 ENSMICG00000036460 CENPC (ENSMICG00000014183) STAP1 (ENSMICG00000014209) UBA6 (ENSMICG00000014868) GNRHR (ENSMICG00000014889) TMPRSS11D (ENSMICG00000014894) TMPRSS11A (ENSMICG00000014906) ENSMICG00000044595 TMPRSS11F (ENSMICG00000014684) TMPRSS11B (ENSMICG00000000833) YTHDC1 (ENSMICG00000034640) TMPRSS11E (ENSMICG00000006258) ENSMICG00000002415 Lemuriformes_a ANCESTRAL SPECIES 30 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.g ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000157838 ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 Coquerels sifaka MODERN SPECIES 587 ADGRL3 (ENSPCOG00000021973) #22 Greater bamboo lemur MODERN SPECIES 178 AASDH (ENSPSMG00000019697) ENSPSMG00000019626 PPAT (ENSPSMG00000019621) ENSPSMG00000019595 SRP72 (ENSPSMG00000019534) ARL9 (ENSPSMG00000019462) THEGL (ENSPSMG00000019443) HOPX (ENSPSMG00000019432) ENSPSMG00000019427 REST (ENSPSMG00000019403) NOA1 (ENSPSMG00000019361) POLR2B (ENSPSMG00000019205) IGFBP7 (ENSPSMG00000019081) ENSPSMG00000019077 ENSPSMG00000019069 ADGRL3 (ENSPSMG00000017292) #22 TECRL (ENSPSMG00000016123) EPHA5 (ENSPSMG00000015985) ENSPSMG00000015754 CENPC (ENSPSMG00000015730) STAP1 (ENSPSMG00000015715) UBA6 (ENSPSMG00000015683) GNRHR (ENSPSMG00000015551) ENSPSMG00000015543 TMPRSS11D (ENSPSMG00000015538) TMPRSS11A (ENSPSMG00000015528) ENSPSMG00000015484 TMPRSS11F (ENSPSMG00000015476) ENSPSMG00000015464 TMPRSS11B (ENSPSMG00000015460) YTHDC1 (ENSPSMG00000015406) Bushbaby MODERN SPECIES 245 ENSOGAG00000029069 ENSOGAG00000026534 ENSOGAG00000015986 NOA1 (ENSOGAG00000015994) POLR2B (ENSOGAG00000015999) IGFBP7 (ENSOGAG00000016006) ENSOGAG00000013734 ENSOGAG00000032570 ADGRL3 (ENSOGAG00000025090) #22 TECRL (ENSOGAG00000011524) EPHA5 (ENSOGAG00000004211) CENPC (ENSOGAG00000008499) Haplorrhini ANCESTRAL SPECIES 23 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 ENSGT00940000158332 Tarsier MODERN SPECIES 6179 ADGRL3 (ENSTSYG00000002157) #22 Simiiformes ANCESTRAL SPECIES 10 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 ENSGT00940000158332.a.a Platyrrhini ANCESTRAL SPECIES 5 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00940000157668.f ENSGT00530000063555.A.a.a ENSGT00940000155201.h ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000158332.b ENSGT00940000158332.a.a.a.a ENSGT00940000158332.a.a.b Cebidae ANCESTRAL SPECIES 4 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00940000157668.f ENSGT00530000063555.A.a.a ENSGT00940000155201.h ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000158332.a.a.a.a ENSGT00940000158332.a.a.b ENSGT00940000158332.a.b Cebidae_a ANCESTRAL SPECIES 63 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00930000151314.h ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00940000157668.f ENSGT00530000063555.A.a.a ENSGT00940000155201.h ENSGT00940000155527 #22 ENSGT00910000147006 Capuchin MODERN SPECIES 133 ENSCCAG00000034033 ENSCCAG00000011688 ADGRL3 (ENSCCAG00000025002) #22 ENSCCAG00000027561 ENSCCAG00000026701 Bolivian squirrel monkey MODERN SPECIES 99 ENSSBOG00000032586 ENSSBOG00000031860 ARL9 (ENSSBOG00000032014) THEGL (ENSSBOG00000023585) HOPX (ENSSBOG00000017553) ENSSBOG00000023352 ENSSBOG00000032589 ENSSBOG00000026443 REST (ENSSBOG00000032119) NOA1 (ENSSBOG00000022956) POLR2B (ENSSBOG00000023163) ENSSBOG00000021494 IGFBP7 (ENSSBOG00000023614) ENSSBOG00000022027 ENSSBOG00000034992 ADGRL3 (ENSSBOG00000001001) #22 ENSSBOG00000021089 Marmoset MODERN SPECIES 15 CEP135 (ENSCJAG00000018119) CRACD (ENSCJAG00000018115) AASDH (ENSCJAG00000018076) PPAT (ENSCJAG00000039960) PAICS (ENSCJAG00000018022) ENSCJAG00000017998 ARL9 (ENSCJAG00000020536) THEGL (ENSCJAG00000039615) ENSCJAG00000045806 ENSCJAG00000085494 REST (ENSCJAG00000004081) NOA1 (ENSCJAG00000004102) POLR2B (ENSCJAG00000004118) IGFBP7 (ENSCJAG00000042323) ENSCJAG00000081106 ADGRL3 (ENSCJAG00000020576) #22 TECRL (ENSCJAG00000053305) ENSCJAG00000007677 ENSCJAG00000071013 ENSCJAG00000071810 EPHA5 (ENSCJAG00000020565) ENSCJAG00000080261 ENSCJAG00000035174 CENPC (ENSCJAG00000019497) ENSCJAG00000083470 STAP1 (ENSCJAG00000044149) UBA6 (ENSCJAG00000009707) GNRHR (ENSCJAG00000040295) TMPRSS11D (ENSCJAG00000009845) TMPRSS11A (ENSCJAG00000009860) TMPRSS11F (ENSCJAG00000009889) Mas night monkey MODERN SPECIES 671 ENSANAG00000026838 ADGRL3 (ENSANAG00000020792) #22 ENSANAG00000020902 ENSANAG00000026613 Catarrhini ANCESTRAL SPECIES 14 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 Cercopithecidae ANCESTRAL SPECIES 10 ENSGT00940000155193.a.a.f.b ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 Rhinopithecus ANCESTRAL SPECIES 843 ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 3237 ENSRROG00000045548 #22 ENSRROG00000004973 ENSRROG00000037767 Golden snub-nosed monkey MODERN SPECIES 3234 ENSRROG00000040611 #22 Black snub-nosed monkey MODERN SPECIES 1097 ADGRL3 (ENSRBIG00000034908) #22 Cercopithecinae ANCESTRAL SPECIES 14 ENSGT00940000155193.a.a.f.b ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 Vervet Monkey MODERN SPECIES 26 CRACD (ENSCSAG00000005049) ENSCSAG00000005053 AASDH (ENSCSAG00000005057) ENSCSAG00000000425 PPAT (ENSCSAG00000005060) SRP72 (ENSCSAG00000005079) ARL9 (ENSCSAG00000005100) THEGL (ENSCSAG00000005107) HOPX (ENSCSAG00000005112) ENSCSAG00000005117 REST (ENSCSAG00000005119) POLR2B (ENSCSAG00000005130) ENSCSAG00000000426 IGFBP7 (ENSCSAG00000005138) ENSCSAG00000005140 ADGRL3 (ENSCSAG00000005151) #22 TECRL (ENSCSAG00000005163) EPHA5 (ENSCSAG00000005186) ENSCSAG00000000427 ENSCSAG00000000428 ENSCSAG00000005197 CENPC (ENSCSAG00000005202) STAP1 (ENSCSAG00000005207) UBA6 (ENSCSAG00000005213) GNRHR (ENSCSAG00000005216) TMPRSS11D (ENSCSAG00000005222) TMPRSS11A (ENSCSAG00000005227) TMPRSS11F (ENSCSAG00000005238) ENSCSAG00000000429 TMPRSS11B (ENSCSAG00000005243) YTHDC1 (ENSCSAG00000005252) Cercopithecinae_a ANCESTRAL SPECIES 13 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00530000063666.b.h.a.b ENSGT00940000155803 ENSGT00940000161786 Macaca ANCESTRAL SPECIES 26 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00530000063666.b.h.a.b ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 Pig-tailed macaque MODERN SPECIES 306 ENSMNEG00000029915 CRACD (ENSMNEG00000037712) AASDH (ENSMNEG00000041209) PPAT (ENSMNEG00000040243) PAICS (ENSMNEG00000044037) ENSMNEG00000038065 ARL9 (ENSMNEG00000042244) THEGL (ENSMNEG00000029009) HOPX (ENSMNEG00000037886) SPINK2 (ENSMNEG00000034333) REST (ENSMNEG00000040064) NOA1 (ENSMNEG00000033975) POLR2B (ENSMNEG00000041844) IGFBP7 (ENSMNEG00000045498) ENSMNEG00000003539 ADGRL3 (ENSMNEG00000030419) #22 ENSMNEG00000027169 TECRL (ENSMNEG00000039810) EPHA5 (ENSMNEG00000013078) ENSMNEG00000015557 CENPC (ENSMNEG00000038222) STAP1 (ENSMNEG00000028890) UBA6 (ENSMNEG00000031168) GNRHR (ENSMNEG00000044818) TMPRSS11D (ENSMNEG00000035627) TMPRSS11A (ENSMNEG00000042431) TMPRSS11F (ENSMNEG00000005324) TMPRSS11B (ENSMNEG00000034439) ENSMNEG00000033805 YTHDC1 (ENSMNEG00000033751) ENSMNEG00000034123 Macaca_a ANCESTRAL SPECIES 12 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT01030000240150 ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT01100000263539.b.a.a.a.a.b.a.a.a.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930 ENSGT00940000158332.a.a.f.b ENSGT00940000162432 Crab-eating macaque MODERN SPECIES 15 SRP72 (ENSMFAG00000031065) ARL9 (ENSMFAG00000039451) THEGL (ENSMFAG00000041767) ENSMFAG00000048360 HOPX (ENSMFAG00000006576) ENSMFAG00000042202 REST (ENSMFAG00000038786) NOA1 (ENSMFAG00000035534) POLR2B (ENSMFAG00000042250) ENSMFAG00000063220 IGFBP7 (ENSMFAG00000032578) ENSMFAG00000063506 ENSMFAG00000061751 ENSMFAG00000050574 ENSMFAG00000060989 ADGRL3 (ENSMFAG00000039672) #22 ENSMFAG00000057860 ENSMFAG00000047761 TECRL (ENSMFAG00000038646) ENSMFAG00000047176 ENSMFAG00000064911 ENSMFAG00000061024 ENSMFAG00000061731 EPHA5 (ENSMFAG00000002837) ENSMFAG00000056168 ENSMFAG00000052981 ENSMFAG00000033104 ENSMFAG00000062521 CENPC (ENSMFAG00000017348) STAP1 (ENSMFAG00000000570) UBA6 (ENSMFAG00000001344) Rhesus MODERN SPECIES 15 ARL9 (ENSMMUG00000052194) THEGL (ENSMMUG00000041612) ENSMMUG00000060244 HOPX (ENSMMUG00000017788) ENSMMUG00000061562 SPINK2 (ENSMMUG00000053539) ENSMMUG00000060599 REST (ENSMMUG00000018821) ENSMMUG00000062484 NOA1 (ENSMMUG00000022530) ENSMMUG00000003469 POLR2B (ENSMMUG00000014008) IGFBP7 (ENSMMUG00000014011) ENSMMUG00000052059 ENSMMUG00000057239 ADGRL3 (ENSMMUG00000002588) #22 ENSMMUG00000055484 TECRL (ENSMMUG00000005537) EPHA5 (ENSMMUG00000014468) ENSMMUG00000058795 CENPC (ENSMMUG00000009390) STAP1 (ENSMMUG00000009392) UBA6 (ENSMMUG00000003776) GNRHR (ENSMMUG00000003779) TMPRSS11D (ENSMMUG00000050011) TMPRSS11A (ENSMMUG00000000552) TMPRSS11F (ENSMMUG00000020312) TMPRSS11B (ENSMMUG00000060914) YTHDC1 (ENSMMUG00000002265) TMPRSS11E (ENSMMUG00000011103) UGT2B7 (ENSMMUG00000012355) Cercopithecinae_b ANCESTRAL SPECIES 6 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d.f ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00930000150941.x.b.b ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00530000063666.b.h.a.b ENSGT00940000155803 ENSGT00940000161786 Olive baboon MODERN SPECIES 13 HOPX (ENSPANG00000007783) ENSPANG00000038978 ENSPANG00000040417 ENSPANG00000048201 ENSPANG00000046814 REST (ENSPANG00000017819) NOA1 (ENSPANG00000017817) POLR2B (ENSPANG00000004759) IGFBP7 (ENSPANG00000009845) ENSPANG00000049686 ENSPANG00000038338 ENSPANG00000032958 ENSPANG00000046616 ENSPANG00000040313 ENSPANG00000039911 ADGRL3 (ENSPANG00000012150) #22 ENSPANG00000045501 ENSPANG00000029695 ENSPANG00000044632 ENSPANG00000049706 TECRL (ENSPANG00000026371) ENSPANG00000043743 ENSPANG00000015098 ENSPANG00000045323 EPHA5 (ENSPANG00000026369) ENSPANG00000041040 ENSPANG00000015418 CENPC (ENSPANG00000013420) STAP1 (ENSPANG00000019724) UBA6 (ENSPANG00000018468) GNRHR (ENSPANG00000048494) Cercopithecinae_d ANCESTRAL SPECIES 269 ENSGT00940000155527 #22 ENSGT00990000203806 ENSGT00910000147006 Drill MODERN SPECIES 423 ADGRL3 (ENSMLEG00000026920) #22 ENSMLEG00000025703 ENSMLEG00000022664 Sooty mangabey MODERN SPECIES 214 ADGRL3 (ENSCATG00000010391) #22 Hominoidea ANCESTRAL SPECIES 10 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428.w ENSGT00390000010172.s ENSGT00390000013264.d.f.b ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.a ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930.d ENSGT00940000163930.c ENSGT00940000165281.b.a Hominidae ANCESTRAL SPECIES 12 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428.w ENSGT00390000010172.s ENSGT00390000013264.d.f.b ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00390000015645.r ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.a ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930.d ENSGT00940000163930.c ENSGT00940000162432 Homo/Pan/Gorilla group ANCESTRAL SPECIES 11 ENSGT00910000148425 ENSGT00390000003428.w ENSGT00390000010172.s ENSGT00390000013264.d.f.b ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00390000015645.r ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00390000018318.u.b.a.b.a.b.d.a ENSGT00940000155527 #22 ENSGT00390000012837.f ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.a ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000154725.d ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930.d Homo/Pan group ANCESTRAL SPECIES 10 ENSGT00910000148425 ENSGT00390000003428.w ENSGT00390000010172.s ENSGT00390000013264.d.f.b ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00390000015645.r ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00390000018318.u.b.a.b.a.b.d.a ENSGT00940000155527 #22 ENSGT00390000012837.f ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.a ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000154725.d ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 ENSGT00940000163930.d Pan ANCESTRAL SPECIES 7 ENSGT00390000003428.w ENSGT00390000010172.s ENSGT00390000013264.d.f.b ENSGT00940000159397 ENSGT00390000017970.n.b ENSGT00940000154630.b ENSGT00390000017143 ENSGT00390000015645.r ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00930000150941.x.b.b ENSGT00530000063555.A.a.a ENSGT00390000018318.u.b.a.b.a.b.d.a ENSGT00940000155527 #22 ENSGT00390000012837.f ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737.a ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000154725.d ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00950000183065.D ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000155803 ENSGT00940000161786 Bonobo MODERN SPECIES 17 PPAT (ENSPPAG00000041710) PAICS (ENSPPAG00000035354) SRP72 (ENSPPAG00000042265) ENSPPAG00000024206 ENSPPAG00000012871 THEGL (ENSPPAG00000040982) ENSPPAG00000029565 ENSPPAG00000040689 ENSPPAG00000037067 REST (ENSPPAG00000004172) NOA1 (ENSPPAG00000033775) POLR2B (ENSPPAG00000040253) ENSPPAG00000025759 IGFBP7 (ENSPPAG00000032246) ENSPPAG00000037993 ADGRL3 (ENSPPAG00000038411) #22 ENSPPAG00000037188 TECRL (ENSPPAG00000038942) ENSPPAG00000035923 ENSPPAG00000042334 ENSPPAG00000028213 CENPC (ENSPPAG00000033444) STAP1 (ENSPPAG00000036102) UBA6 (ENSPPAG00000035878) ENSPPAG00000033385 GNRHR (ENSPPAG00000041707) TMPRSS11D (ENSPPAG00000036313) TMPRSS11A (ENSPPAG00000040487) ENSPPAG00000039463 TMPRSS11F (ENSPPAG00000008093) TMPRSS11B (ENSPPAG00000035972) Chimpanzee MODERN SPECIES 17 AASDH (ENSPTRG00000016079) PPAT (ENSPTRG00000016080) PAICS (ENSPTRG00000016081) ENSPTRG00000048466 ARL9 (ENSPTRG00000023347) ENSPTRG00000046883 THEGL (ENSPTRG00000049168) HOPX (ENSPTRG00000016084) ENSPTRG00000046323 SPINK2 (ENSPTRG00000016086) REST (ENSPTRG00000016087) NOA1 (ENSPTRG00000016088) POLR2B (ENSPTRG00000016089) ENSPTRG00000052280 IGFBP7 (ENSPTRG00000016090) ADGRL3 (ENSPTRG00000016092) #22 ENSPTRG00000049004 ENSPTRG00000052590 TECRL (ENSPTRG00000031172) EPHA5 (ENSPTRG00000016095) ENSPTRG00000041833 CENPC (ENSPTRG00000016096) STAP1 (ENSPTRG00000016098) UBA6 (ENSPTRG00000016099) GNRHR (ENSPTRG00000016100) TMPRSS11D (ENSPTRG00000016101) TMPRSS11A (ENSPTRG00000016102) ENSPTRG00000044008 TMPRSS11F (ENSPTRG00000022832) TMPRSS11B (ENSPTRG00000016104) YTHDC1 (ENSPTRG00000016105) Human MODERN SPECIES 16 EXOC1 (ENSG00000090989) CEP135 (ENSG00000174799) CRACD (ENSG00000109265) AASDH (ENSG00000157426) PPAT (ENSG00000128059) PAICS (ENSG00000128050) SRP72 (ENSG00000174780) ARL9 (ENSG00000196503) THEGL (ENSG00000249693) HOPX (ENSG00000171476) SPINK2 (ENSG00000128040) REST (ENSG00000084093) NOA1 (ENSG00000084092) POLR2B (ENSG00000047315) IGFBP7 (ENSG00000163453) ADGRL3 (ENSG00000150471) #22 TECRL (ENSG00000205678) EPHA5 (ENSG00000145242) CENPC (ENSG00000145241) STAP1 (ENSG00000035720) UBA6 (ENSG00000033178) GNRHR (ENSG00000109163) TMPRSS11D (ENSG00000153802) TMPRSS11A (ENSG00000187054) TMPRSS11F (ENSG00000198092) TMPRSS11B (ENSG00000185873) YTHDC1 (ENSG00000083896) TMPRSS11E (ENSG00000087128) UGT2B17 (ENSG00000197888) UGT2B15 (ENSG00000196620) UGT2B10 (ENSG00000109181) Gorilla MODERN SPECIES 17 AASDH (ENSGGOG00000023372) PPAT (ENSGGOG00000004608) PAICS (ENSGGOG00000024392) SRP72 (ENSGGOG00000013234) ENSGGOG00000006178 THEGL (ENSGGOG00000040755) ENSGGOG00000004631 ENSGGOG00000014511 ENSGGOG00000024150 REST (ENSGGOG00000002165) NOA1 (ENSGGOG00000040999) POLR2B (ENSGGOG00000034986) ENSGGOG00000024159 IGFBP7 (ENSGGOG00000016249) ENSGGOG00000025776 ADGRL3 (ENSGGOG00000016509) #22 ENSGGOG00000026750 TECRL (ENSGGOG00000027332) ENSGGOG00000041511 EPHA5 (ENSGGOG00000016463) ENSGGOG00000024307 CENPC (ENSGGOG00000009794) STAP1 (ENSGGOG00000000321) UBA6 (ENSGGOG00000014742) ENSGGOG00000013903 GNRHR (ENSGGOG00000016163) TMPRSS11D (ENSGGOG00000001235) TMPRSS11A (ENSGGOG00000012506) TMPRSS11F (ENSGGOG00000001247) TMPRSS11B (ENSGGOG00000025912) YTHDC1 (ENSGGOG00000021958) Orangutan MODERN SPECIES 17 ENSPPYG00000036324 PPAT (ENSPPYG00000029568) PAICS (ENSPPYG00000014753) SRP72 (ENSPPYG00000014752) ARL9 (ENSPPYG00000014751) ENSPPYG00000014750 THEGL (ENSPPYG00000032046) ENSPPYG00000039212 ENSPPYG00000014747 ENSPPYG00000031462 REST (ENSPPYG00000037151) NOA1 (ENSPPYG00000014744) POLR2B (ENSPPYG00000014743) IGFBP7 (ENSPPYG00000038152) ENSPPYG00000037118 ADGRL3 (ENSPPYG00000014740) #22 TECRL (ENSPPYG00000014738) ENSPPYG00000012305 EPHA5 (ENSPPYG00000014737) ENSPPYG00000040221 CENPC (ENSPPYG00000014736) STAP1 (ENSPPYG00000014735) UBA6 (ENSPPYG00000014733) GNRHR (ENSPPYG00000014732) TMPRSS11D (ENSPPYG00000014731) TMPRSS11A (ENSPPYG00000014730) TMPRSS11F (ENSPPYG00000014728) TMPRSS11B (ENSPPYG00000014727) CWH43 (ENSPPYG00000014723) OCIAD2 (ENSPPYG00000014722) OCIAD1 (ENSPPYG00000014721) Gibbon MODERN SPECIES 24 PPAT (ENSNLEG00000008762) PAICS (ENSNLEG00000008786) SRP72 (ENSNLEG00000008806) ENSNLEG00000034401 THEGL (ENSNLEG00000035230) HOPX (ENSNLEG00000033904) ENSNLEG00000008829 REST (ENSNLEG00000008836) NOA1 (ENSNLEG00000008853) POLR2B (ENSNLEG00000008874) ENSNLEG00000031259 ENSNLEG00000029063 IGFBP7 (ENSNLEG00000029053) ENSNLEG00000028744 ENSNLEG00000028144 ADGRL3 (ENSNLEG00000008957) #22 ENSNLEG00000033354 TECRL (ENSNLEG00000008982) ENSNLEG00000030813 EPHA5 (ENSNLEG00000008987) CENPC (ENSNLEG00000009058) STAP1 (ENSNLEG00000009082) UBA6 (ENSNLEG00000009086) GNRHR (ENSNLEG00000009158) TMPRSS11D (ENSNLEG00000009163) TMPRSS11A (ENSNLEG00000009182) TMPRSS11F (ENSNLEG00000009193) YTHDC1 (ENSNLEG00000009202) TMPRSS11E (ENSNLEG00000009223) UGT2B15 (ENSNLEG00000009240) ENSNLEG00000009256 Laurasiatheria ANCESTRAL SPECIES 11 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Laurasiatheria_a ANCESTRAL SPECIES 8 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 Artiodactyla ANCESTRAL SPECIES 12 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 Suina ANCESTRAL SPECIES 22 ENSGT00940000158640 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000153212.h.o.a.a Pig MODERN SPECIES 16 ENSSSCG00000038107 ENSSSCG00000023357 ENSSSCG00000036736 ENSSSCG00000058108 NOA1 (ENSSSCG00000025792) POLR2B (ENSSSCG00000022955) IGFBP7 (ENSSSCG00000008913) ENSSSCG00000058084 ENSSSCG00000056626 ENSSSCG00000052533 ENSSSCG00000058187 ENSSSCG00000048506 ENSSSCG00000049794 ENSSSCG00000046730 ENSSSCG00000062497 ADGRL3 (ENSSSCG00000026129) #22 ENSSSCG00000031193 ENSSSCG00000057803 TECRL (ENSSSCG00000024681) EPHA5 (ENSSSCG00000008919) ENSSSCG00000042027 ENSSSCG00000063524 CENPC (ENSSSCG00000008921) STAP1 (ENSSSCG00000008923) UBA6 (ENSSSCG00000008924) ENSSSCG00000045597 ENSSSCG00000029658 ENSSSCG00000052565 TMPRSS11D (ENSSSCG00000008926) TMPRSS11A (ENSSSCG00000008927) ENSSSCG00000062399 Chacoan peccary MODERN SPECIES 142 NMU (ENSCWAG00000012857) EXOC1L (ENSCWAG00000012783) EXOC1 (ENSCWAG00000012665) CEP135 (ENSCWAG00000012609) CRACD (ENSCWAG00000011987) AASDH (ENSCWAG00000011752) PPAT (ENSCWAG00000011631) PAICS (ENSCWAG00000011570) SRP72 (ENSCWAG00000011477) ENSCWAG00000011426 HOPX (ENSCWAG00000011388) ENSCWAG00000011337 REST (ENSCWAG00000011265) POLR2B (ENSCWAG00000011014) IGFBP7 (ENSCWAG00000010967) ADGRL3 (ENSCWAG00000003168) #22 ENSCWAG00000002865 TECRL (ENSCWAG00000002839) EPHA5 (ENSCWAG00000002369) CENPC (ENSCWAG00000002282) STAP1 (ENSCWAG00000002254) UBA6 (ENSCWAG00000002233) GNRHR (ENSCWAG00000002206) ENSCWAG00000002180 TMPRSS11D (ENSCWAG00000002153) TMPRSS11A (ENSCWAG00000002127) ENSCWAG00000002098 TMPRSS11F (ENSCWAG00000002076) ENSCWAG00000002055 TMPRSS11B (ENSCWAG00000002032) ENSCWAG00000001977 Artiodactyla_a ANCESTRAL SPECIES 12 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Artiodactyla_b ANCESTRAL SPECIES 16 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Cetacea ANCESTRAL SPECIES 12 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.j ENSGT00940000155341.g.a.a.b ENSGT00940000155341.g.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00950000183004.a.b.a.a.c.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h ENSGT00940000164288 Odontoceti ANCESTRAL SPECIES 11 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.j ENSGT00940000155341.g.a.a.b ENSGT00940000163344.b ENSGT00390000006100.g.b ENSGT00940000155341.g.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00950000183004.a.b.a.a.c.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01050000244891.A.d.a.a ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h Odontoceti_a ANCESTRAL SPECIES 23 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.j ENSGT00940000155341.g.a.a.b ENSGT00940000163344.b ENSGT00390000006100.g.b ENSGT00940000155341.g.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00950000183004.a.b.a.a.c.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000185997 ENSGT00950000182886.a.b ENSGT01050000244891.A.d.a.a ENSGT00940000156266 ENSGT00390000016737 ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h ENSGT00940000164288 Odontoceti_b ANCESTRAL SPECIES 11 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.j ENSGT00940000155341.g.a.a.b ENSGT00940000163344.b ENSGT00390000006100.g.b ENSGT00940000155341.g.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00950000183004.a.b.a.a.c.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000185997 ENSGT00950000182886.a.b ENSGT01050000244891.A.d.a.a ENSGT00940000156266 ENSGT00940000153147.m.a.a.a.b.a.a.gb ENSGT00390000016737 ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h ENSGT00940000164288 Monodontidae ANCESTRAL SPECIES 9 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.j ENSGT00940000155341.g.a.a.b ENSGT00940000163344.b ENSGT00390000006100.g.b ENSGT00940000155341.g.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00950000183004.a.b.a.a.c.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000185997.a ENSGT00950000182886.a.b ENSGT01050000244891.A.d.a.a ENSGT00940000156266 ENSGT00940000153147.m.a.a.a.b.a.a.gb ENSGT00390000016737 ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000161680 ENSGT00730000111029.g.a ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153212.h Narwhal MODERN SPECIES 307 SRP72 (ENSMMNG00015012225) ENSMMNG00015012186 ENSMMNG00015012180 THEGL (ENSMMNG00015012165) HOPX (ENSMMNG00015012141) ENSMMNG00015012122 ENSMMNG00015012062 ENSMMNG00015012049 ENSMMNG00015012040 ENSMMNG00015012028 NOA1 (ENSMMNG00015012010) ENSMMNG00015011995 POLR2B (ENSMMNG00015011928) ENSMMNG00015011894 IGFBP7 (ENSMMNG00015011877) ADGRL3 (ENSMMNG00015011387) #22 ENSMMNG00015011177 ENSMMNG00015011164 TECRL (ENSMMNG00015011127) ENSMMNG00015011106 EPHA5 (ENSMMNG00015010909) ENSMMNG00015010802 CENPC (ENSMMNG00015010752) UBA6 (ENSMMNG00015010726) GNRHR (ENSMMNG00015010706) TMPRSS11D (ENSMMNG00015010685) TMPRSS11A (ENSMMNG00015010664) ENSMMNG00015010645 ENSMMNG00015010607 TMPRSS11E (ENSMMNG00015010591) ENSMMNG00015010567 Beluga whale MODERN SPECIES 77 ENSDLEG00000014072 SRP72 (ENSDLEG00000014021) ARL9 (ENSDLEG00000014007) THEGL (ENSDLEG00000013936) HOPX (ENSDLEG00000013911) ENSDLEG00000013894 ENSDLEG00000013880 ENSDLEG00000013873 LAMTOR2 (ENSDLEG00000013858) ENSDLEG00000013849 NOA1 (ENSDLEG00000013832) POLR2B (ENSDLEG00000013785) ENSDLEG00000013747 IGFBP7 (ENSDLEG00000013741) ENSDLEG00000013727 ADGRL3 (ENSDLEG00000013614) #22 ENSDLEG00000013592 ENSDLEG00000013581 TECRL (ENSDLEG00000013514) ENSDLEG00000013502 RPL15 (ENSDLEG00000013495) EPHA5 (ENSDLEG00000013414) ENSDLEG00000013392 CENPC (ENSDLEG00000013357) ENSDLEG00000013320 ENSDLEG00000010542 TMPRSS11D (ENSDLEG00000010288) TMPRSS11A (ENSDLEG00000010261) ENSDLEG00000010239 TMPRSS11E (ENSDLEG00000010216) YTHDC1 (ENSDLEG00000010139) Vaquita MODERN SPECIES 16 ENSPSNG00000001179 ENSPSNG00000001197 PAICS (ENSPSNG00000001214) SRP72 (ENSPSNG00000001264) ARL9 (ENSPSNG00000001309) THEGL (ENSPSNG00000001329) HOPX (ENSPSNG00000001376) ENSPSNG00000001402 ENSPSNG00000001425 ENSPSNG00000001451 ENSPSNG00000001480 NOA1 (ENSPSNG00000001492) POLR2B (ENSPSNG00000001540) ENSPSNG00000001679 IGFBP7 (ENSPSNG00000001692) ADGRL3 (ENSPSNG00000002346) #22 ENSPSNG00000003520 TECRL (ENSPSNG00000003539) ENSPSNG00000003580 EPHA5 (ENSPSNG00000003685) ENSPSNG00000003889 ENSPSNG00000003896 CENPC (ENSPSNG00000003913) UBA6 (ENSPSNG00000003963) GNRHR (ENSPSNG00000003987) TMPRSS11D (ENSPSNG00000004003) TMPRSS11A (ENSPSNG00000004025) TMPRSS11E (ENSPSNG00000004041) YTHDC1 (ENSPSNG00000004070) ENSPSNG00000004094 UGT2A1 (ENSPSNG00000004107) Dolphin MODERN SPECIES 1026 ADGRL3 (ENSTTRG00000009265) #22 Sperm whale MODERN SPECIES 18 THEGL (ENSPCTG00005004247) HOPX (ENSPCTG00005004233) ENSPCTG00005004216 ENSPCTG00005004198 ENSPCTG00005004172 ENSPCTG00005004167 ENSPCTG00005004160 ENSPCTG00005004151 ENSPCTG00005004139 NOA1 (ENSPCTG00005004123) POLR2B (ENSPCTG00005004031) ENSPCTG00005004007 IGFBP7 (ENSPCTG00005003998) ENSPCTG00005003979 ENSPCTG00005003966 ADGRL3 (ENSPCTG00005001783) #22 TECRL (ENSPCTG00005001362) ENSPCTG00005001343 EPHA5 (ENSPCTG00005001144) ENSPCTG00005001061 CENPC (ENSPCTG00005001007) STAP1 (ENSPCTG00005000943) UBA6 (ENSPCTG00005000926) GNRHR (ENSPCTG00005000907) ENSPCTG00005000891 TMPRSS11D (ENSPCTG00005000868) TMPRSS11A (ENSPCTG00005000831) ENSPCTG00005000812 TMPRSS11E (ENSPCTG00005000804) YTHDC1 (ENSPCTG00005000765) UGT2A1 (ENSPCTG00005000722) Blue whale MODERN SPECIES 16 ENSBMSG00010000244 ARL9 (ENSBMSG00010000197) ENSBMSG00010000174 THEGL (ENSBMSG00010000109) HOPX (ENSBMSG00010000065) ENSBMSG00010014434 ENSBMSG00010014397 ENSBMSG00010014345 NOA1 (ENSBMSG00010014290) ENSBMSG00010014236 POLR2B (ENSBMSG00010013814) ENSBMSG00010013726 IGFBP7 (ENSBMSG00010013709) ENSBMSG00010013694 ENSBMSG00010013680 ADGRL3 (ENSBMSG00010012328) #22 ENSBMSG00010011844 TECRL (ENSBMSG00010011818) ENSBMSG00010011805 EPHA5 (ENSBMSG00010011607) CENPC (ENSBMSG00010011551) STAP1 (ENSBMSG00010011517) UBA6 (ENSBMSG00010011479) GNRHR (ENSBMSG00010011451) TMPRSS11D (ENSBMSG00010011425) TMPRSS11A (ENSBMSG00010011350) TMPRSS11F (ENSBMSG00010011275) ENSBMSG00010011263 TMPRSS11E (ENSBMSG00010011249) ENSBMSG00010011139 ENSBMSG00010011107 Pecora ANCESTRAL SPECIES 15 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Yarkand deer MODERN SPECIES 29 PAICS (ENSCHYG00000017941) SRP72 (ENSCHYG00000018278) ENSCHYG00000018979 THEGL (ENSCHYG00000019032) ENSCHYG00000019140 ENSCHYG00000019165 HOPX (ENSCHYG00000019225) ENSCHYG00000019329 ENSCHYG00000019423 ENSCHYG00000019556 ENSCHYG00000019601 NOA1 (ENSCHYG00000019675) POLR2B (ENSCHYG00000019734) IGFBP7 (ENSCHYG00000020252) ENSCHYG00000020352 ADGRL3 (ENSCHYG00000020724) #22 ENSCHYG00000024229 ENSCHYG00000024236 ENSCHYG00000024282 ENSCHYG00000024307 EPHA5 (ENSCHYG00000024412) CENPC (ENSCHYG00000024832) STAP1 (ENSCHYG00000024987) UBA6 (ENSCHYG00000025042) GNRHR (ENSCHYG00000025176) ENSCHYG00000025210 TMPRSS11D (ENSCHYG00000025257) TMPRSS11A (ENSCHYG00000025296) ENSCHYG00000025356 TMPRSS11F (ENSCHYG00000025413) ENSCHYG00000025466 Percora_a ANCESTRAL SPECIES 18 ENSGT00940000168854 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Siberian musk deer MODERN SPECIES 1266 ENSMMSG00000024308 PPAT (ENSMMSG00000024306) PAICS (ENSMMSG00000024303) SRP72 (ENSMMSG00000024300) ENSMMSG00000024297 THEGL (ENSMMSG00000024295) ENSMMSG00000024294 HOPX (ENSMMSG00000024293) ENSMMSG00000024291 ENSMMSG00000024290 ENSMMSG00000024288 ENSMMSG00000024287 NOA1 (ENSMMSG00000024285) POLR2B (ENSMMSG00000024277) IGFBP7 (ENSMMSG00000024272) ADGRL3 (ENSMMSG00000022820) #22 Bovidae ANCESTRAL SPECIES 18 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT01020000231484 ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00390000018525.a.a.c.b.b ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Bovinae ANCESTRAL SPECIES 15 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT01020000231484 ENSGT00960000187074 ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h.s ENSGT00530000064285.i.b ENSGT00940000155341.h.t ENSGT00390000001695 ENSGT00390000018525.a.a.c.b.b ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Bos ANCESTRAL SPECIES 15 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT01020000231484 ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h.s ENSGT00530000064285.i.b ENSGT00940000155341.h.t ENSGT00390000001695 ENSGT00390000018525.a.a.c.b.b ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Bos_b ANCESTRAL SPECIES 14 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT01020000231484 ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h.s ENSGT00530000064285.i.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00390000018525.a.a.c.b.b ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000153362.a.cb.b.b.f.a.a ENSGT00940000161786 Cow MODERN SPECIES 25 PPAT (ENSBTAG00000010571) PAICS (ENSBTAG00000010577) SRP72 (ENSBTAG00000010593) ARL9 (ENSBTAG00000010615) THEGL (ENSBTAG00000051380) ENSBTAG00000054014 HOPX (ENSBTAG00000002333) SPINK2B (ENSBTAG00000032560) RESTB (ENSBTAG00000011789) NOA1A (ENSBTAG00000019362) ENSBTAG00000050628 POLR2B (ENSBTAG00000019366) ENSBTAG00000052745 IGFBP7 (ENSBTAG00000019368) ENSBTAG00000049338 ADGRL3 (ENSBTAG00000013918) #22 ENSBTAG00000053291 ENSBTAG00000054580 TECRL (ENSBTAG00000024826) ENSBTAG00000050977 EPHA5 (ENSBTAG00000009438) ENSBTAG00000053125 ENSBTAG00000052362 CENPC (ENSBTAG00000001323) STAP1 (ENSBTAG00000000962) UBA6 (ENSBTAG00000006837) GNRHR (ENSBTAG00000000438) ENSBTAG00000038648 TMPRSS11D (ENSBTAG00000001925) TMPRSS11A (ENSBTAG00000020298) ENSBTAG00000025920 Hybrid Bos Indicus MODERN SPECIES 25 AASDH (ENSBIXG00005008765) PPAT (ENSBIXG00005008741) ENSBIXG00005008711 SRP72 (ENSBIXG00005008654) ARL9 (ENSBIXG00005008627) THEGL (ENSBIXG00005008619) ENSBIXG00005008592 HOPX (ENSBIXG00005008550) ENSBIXG00005008508 REST (ENSBIXG00005008483) NOA1 (ENSBIXG00005008452) ENSBIXG00005008433 POLR2B (ENSBIXG00005008419) IGFBP7 (ENSBIXG00005008331) ENSBIXG00005008313 ADGRL3 (ENSBIXG00005000123) #22 ENSBIXG00005029784 ENSBIXG00005029799 TECRL (ENSBIXG00005001707) EPHA5 (ENSBIXG00005029155) ENSBIXG00005001983 ENSBIXG00005002006 CENPC (ENSBIXG00005002020) ENSBIXG00005002083 STAP1 (ENSBIXG00005002107) UBA6 (ENSBIXG00005028961) GNRHR (ENSBIXG00005005075) ENSBIXG00005002215 TMPRSS11D (ENSBIXG00005028894) TMPRSS11A (ENSBIXG00005005025) ENSBIXG00005028837 Bos_a ANCESTRAL SPECIES ENSGT00940000155527 #22 Wild yak MODERN SPECIES 772 ADGRL3 (ENSBMUG00000003619) #22 Domestic yak MODERN SPECIES 25 PPAT (ENSBGRG00000022170) ENSBGRG00000022130 ENSBGRG00000022078 SRP72 (ENSBGRG00000021740) ARL9 (ENSBGRG00000021704) THEGL (ENSBGRG00000021615) HOPX (ENSBGRG00000021582) ENSBGRG00000021290 NOA1 (ENSBGRG00000021223) ENSBGRG00000021185 POLR2B (ENSBGRG00000020295) IGFBP7 (ENSBGRG00000020216) ENSBGRG00000020158 ENSBGRG00000020139 ENSBGRG00000020122 ADGRL3 (ENSBGRG00000015073) #22 ENSBGRG00000014906 ENSBGRG00000014888 ENSBGRG00000014858 TECRL (ENSBGRG00000014709) EPHA5 (ENSBGRG00000013918) CENPC (ENSBGRG00000013571) STAP1 (ENSBGRG00000013380) UBA6 (ENSBGRG00000013131) GNRHR (ENSBGRG00000013007) TMPRSS11D (ENSBGRG00000012686) TMPRSS11A (ENSBGRG00000012606) ENSBGRG00000012561 TMPRSS11F (ENSBGRG00000012506) ENSBGRG00000012420 ENSBGRG00000012362 American bison MODERN SPECIES 3087 ADGRL3 (ENSBBBG00000011850) #22 Caprinae ANCESTRAL SPECIES 13 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172.z ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT01020000231484 ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h ENSGT00390000001695 ENSGT00390000018525.a.a.c.b.b ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 Rambouillet Sheep MODERN SPECIES 22 ENSOARG00020018714 CEP135 (ENSOARG00020018779) AASDH (ENSOARG00020019446) ENSOARG00020019566 SRP72 (ENSOARG00020019666) THEGL (ENSOARG00020019845) ENSOARG00020019924 HOPX (ENSOARG00020019962) ENSOARG00020020007 REST (ENSOARG00020020071) NOA1 (ENSOARG00020020172) POLR2B (ENSOARG00020020250) ENSOARG00020020518 IGFBP7 (ENSOARG00020020541) ENSOARG00020020669 ADGRL3 (ENSOARG00020020864) #22 ENSOARG00020024357 TECRL (ENSOARG00020024373) ENSOARG00020024397 ENSOARG00020024401 EPHA5 (ENSOARG00020000230) ENSOARG00020000288 STAP1 (ENSOARG00020000371) GNRHR (ENSOARG00020000382) ENSOARG00020000395 TMPRSS11D (ENSOARG00020000420) TMPRSS11A (ENSOARG00020000446) ENSOARG00020000477 TMPRSS11F (ENSOARG00020000512) TMPRSS11E (ENSOARG00020000561) YTHDC1 (ENSOARG00020000649) Goat DUPLICATION Goat MODERN SPECIES 25 ENSCHIG00000012259 SRP72 (ENSCHIG00000021465) ARL9 (ENSCHIG00000011839) THEGL (ENSCHIG00000024675) ENSCHIG00000016922 HOPX (ENSCHIG00000005024) ENSCHIG00000022559 ENSCHIG00000015747 ENSCHIG00000026873 NOA1 (ENSCHIG00000017563) ENSCHIG00000010831 POLR2B (ENSCHIG00000011013) IGFBP7 (ENSCHIG00000022973) ENSCHIG00000016654 ENSCHIG00000027123 #22 ADGRL3 (ENSCHIG00000020632) #22 ENSCHIG00000013320 ENSCHIG00000001538 TECRL (ENSCHIG00000019706) ENSCHIG00000008397 EPHA5 (ENSCHIG00000010390) ENSCHIG00000022825 CENPC (ENSCHIG00000015858) STAP1 (ENSCHIG00000026945) UBA6 (ENSCHIG00000018059) GNRHR (ENSCHIG00000013350) ENSCHIG00000025271 TMPRSS11D (ENSCHIG00000016197) TMPRSS11A (ENSCHIG00000001607) ENSCHIG00000021203 TMPRSS11F (ENSCHIG00000015181) Goat MODERN SPECIES 25 ENSCHIG00000013585 ENSCHIG00000012259 SRP72 (ENSCHIG00000021465) ARL9 (ENSCHIG00000011839) THEGL (ENSCHIG00000024675) ENSCHIG00000016922 HOPX (ENSCHIG00000005024) ENSCHIG00000022559 ENSCHIG00000015747 ENSCHIG00000026873 NOA1 (ENSCHIG00000017563) ENSCHIG00000010831 POLR2B (ENSCHIG00000011013) IGFBP7 (ENSCHIG00000022973) ENSCHIG00000016654 ENSCHIG00000027123 #22 ADGRL3 (ENSCHIG00000020632) #22 ENSCHIG00000013320 ENSCHIG00000001538 TECRL (ENSCHIG00000019706) ENSCHIG00000008397 EPHA5 (ENSCHIG00000010390) ENSCHIG00000022825 CENPC (ENSCHIG00000015858) STAP1 (ENSCHIG00000026945) UBA6 (ENSCHIG00000018059) GNRHR (ENSCHIG00000013350) ENSCHIG00000025271 TMPRSS11D (ENSCHIG00000016197) TMPRSS11A (ENSCHIG00000001607) ENSCHIG00000021203 Camelidae ANCESTRAL SPECIES 22 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285.i.a ENSGT00940000155341.h.q ENSGT00940000155341.h.r ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 Arabian camel MODERN SPECIES 11 PDLIM5 (ENSCDRG00005008970) HPGDS (ENSCDRG00005009472) SMARCAD1 (ENSCDRG00005009588) ATOH1 (ENSCDRG00005009854) ENSCDRG00005009873 GRID2 (ENSCDRG00005009950) ENSCDRG00005010381 CCSER1 (ENSCDRG00005010415) MMRN1 (ENSCDRG00005010505) ENSCDRG00005010544 ENSCDRG00005010708 ENSCDRG00005010793 POLR2B (ENSCDRG00005010929) IGFBP7 (ENSCDRG00005011222) ENSCDRG00005011298 ADGRL3 (ENSCDRG00005011461) #22 ENSCDRG00005016248 TECRL (ENSCDRG00005016258) EPHA5 (ENSCDRG00005016353) ENSCDRG00005016777 ENSCDRG00005016828 CENPC (ENSCDRG00005016837) STAP1 (ENSCDRG00005016912) UBA6 (ENSCDRG00005016966) GNRHR (ENSCDRG00005017041) ENSCDRG00005017088 TMPRSS11D (ENSCDRG00005017168) TMPRSS11A (ENSCDRG00005017245) ENSCDRG00005017298 TMPRSS11F (ENSCDRG00005017352) ENSCDRG00005017437 Alpaca MODERN SPECIES 1104 ADGRL3 (ENSVPAG00000012280) #22 Laurasiatheria_b ANCESTRAL SPECIES 8 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 Laurasiatheria_c ANCESTRAL SPECIES 8 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 Equus ANCESTRAL SPECIES 12 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000169858 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT01090000260919 ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 Donkey MODERN SPECIES 22 CEP135 (ENSEASG00005017805) CRACD (ENSEASG00005017786) AASDH (ENSEASG00005017782) PPAT (ENSEASG00005017759) ENSEASG00005017751 SRP72 (ENSEASG00005017747) ARL9 (ENSEASG00005036423) THEGL (ENSEASG00005017742) HOPX (ENSEASG00005028313) ENSEASG00005038392 ENSEASG00005032877 REST (ENSEASG00005029004) NOA1 (ENSEASG00005017733) POLR2B (ENSEASG00005017727) IGFBP7 (ENSEASG00005025432) ADGRL3 (ENSEASG00005017214) #22 ENSEASG00005018152 TECRL (ENSEASG00005018158) ENSEASG00005018163 EPHA5 (ENSEASG00005018169) CENPC (ENSEASG00005018183) STAP1 (ENSEASG00005018188) UBA6 (ENSEASG00005018234) GNRHR (ENSEASG00005018333) ENSEASG00005018338 TMPRSS11D (ENSEASG00005018344) TMPRSS11A (ENSEASG00005018347) ENSEASG00005018354 TMPRSS11F (ENSEASG00005018358) ENSEASG00005018360 ENSEASG00005018364 Horse MODERN SPECIES 22 CRACD (ENSECAG00000013781) ENSECAG00000001025 PPAT (ENSECAG00000023644) PAICS (ENSECAG00000019862) SRP72 (ENSECAG00000006920) ENSECAG00000055241 THEGL (ENSECAG00000004708) HOPX (ENSECAG00000029287) ENSECAG00000001010 ENSECAG00000035335 REST (ENSECAG00000022536) NOA1 (ENSECAG00000020627) POLR2B (ENSECAG00000013610) IGFBP7 (ENSECAG00000013087) ENSECAG00000051724 ADGRL3 (ENSECAG00000018863) #22 ENSECAG00000031668 ENSECAG00000055107 TECRL (ENSECAG00000016952) ENSECAG00000032746 EPHA5 (ENSECAG00000000530) ENSECAG00000056541 CENPC (ENSECAG00000018267) STAP1 (ENSECAG00000016140) UBA6 (ENSECAG00000012273) ENSECAG00000054382 GNRHR (ENSECAG00000005763) ENSECAG00000011052 TMPRSS11D (ENSECAG00000010705) TMPRSS11A (ENSECAG00000009414) TMPRSS11F (ENSECAG00000006671) Chiroptera ANCESTRAL SPECIES 9 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719.c ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Megabat MODERN SPECIES 1319 ADGRL3 (ENSPVAG00000010756) #22 Microchiroptera ANCESTRAL SPECIES 10 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719.c ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Greater horseshoe bat MODERN SPECIES 23 PPAT (ENSRFEG00010004725) ENSRFEG00010004742 ENSRFEG00010004746 SRP72 (ENSRFEG00010004765) ARL9 (ENSRFEG00010004781) THEGL (ENSRFEG00010004797) HOPX (ENSRFEG00010004815) ENSRFEG00010004833 REST (ENSRFEG00010004854) NOA1 (ENSRFEG00010004863) POLR2B (ENSRFEG00010004893) IGFBP7 (ENSRFEG00010004923) ENSRFEG00010004930 ENSRFEG00010010303 ENSRFEG00010010359 ADGRL3 (ENSRFEG00010010560) #22 ENSRFEG00010011269 TECRL (ENSRFEG00010011319) ENSRFEG00010011678 ENSRFEG00010011689 EPHA5 (ENSRFEG00010011768) ENSRFEG00010013182 ENSRFEG00010013198 CENPC (ENSRFEG00010013218) STAP1 (ENSRFEG00010013275) UBA6 (ENSRFEG00010013313) GNRHR (ENSRFEG00010013422) ENSRFEG00010013481 TMPRSS11D (ENSRFEG00010013679) TMPRSS11A (ENSRFEG00010013841) ENSRFEG00010014010 Microbat MODERN SPECIES 1072 ADGRL3 (ENSMLUG00000004264) #22 Carnivora ANCESTRAL SPECIES 5 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 Felidae ANCESTRAL SPECIES 4 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000155864.a.b.x ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 Panthera ANCESTRAL SPECIES 5 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000155864.a.b.x ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 Panthera_a ANCESTRAL SPECIES 2 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00940000164461 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00910000147006 ENSGT00950000182886.a.b ENSGT00940000155864.a.b.x ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 leopard MODERN SPECIES 2 CEP135 (ENSPPRG00000009012) CRACD (ENSPPRG00000010895) AASDH (ENSPPRG00000013116) PPAT (ENSPPRG00000013619) PAICS (ENSPPRG00000014288) SRP72 (ENSPPRG00000015991) ENSPPRG00000017715 THEGL (ENSPPRG00000018282) HOPX (ENSPPRG00000024713) ENSPPRG00000024410 ENSPPRG00000023965 NOA1 (ENSPPRG00000023695) POLR2B (ENSPPRG00000001235) IGFBP7 (ENSPPRG00000002033) ENSPPRG00000002918 ADGRL3 (ENSPPRG00000019171) #22 ENSPPRG00000020504 ENSPPRG00000022143 ENSPPRG00000022630 TECRL (ENSPPRG00000000203) ENSPPRG00000000359 EPHA5 (ENSPPRG00000003915) CENPC (ENSPPRG00000005524) STAP1 (ENSPPRG00000006576) UBA6 (ENSPPRG00000007330) GNRHR (ENSPPRG00000007489) ENSPPRG00000007890 TMPRSS11D (ENSPPRG00000008391) TMPRSS11A (ENSPPRG00000008808) ENSPPRG00000009462 TMPRSS11F (ENSPPRG00000010174) lion MODERN SPECIES 4 CRACD (ENSPLOG00000004162) AASDH (ENSPLOG00000004176) PPAT (ENSPLOG00000004193) ENSPLOG00000004203 PAICS (ENSPLOG00000004213) SRP72 (ENSPLOG00000004272) ENSPLOG00000004320 THEGL (ENSPLOG00000004336) HOPX (ENSPLOG00000004353) ENSPLOG00000004367 REST (ENSPLOG00000004383) NOA1 (ENSPLOG00000004394) POLR2B (ENSPLOG00000004422) IGFBP7 (ENSPLOG00000004461) ENSPLOG00000004475 ADGRL3 (ENSPLOG00000007388) #22 ENSPLOG00000008535 TECRL (ENSPLOG00000008679) ENSPLOG00000008813 EPHA5 (ENSPLOG00000008963) CENPC (ENSPLOG00000009701) STAP1 (ENSPLOG00000009809) UBA6 (ENSPLOG00000009849) GNRHR (ENSPLOG00000009893) ENSPLOG00000009946 TMPRSS11D (ENSPLOG00000010010) TMPRSS11A (ENSPLOG00000010069) ENSPLOG00000010114 TMPRSS11F (ENSPLOG00000010160) ENSPLOG00000010234 TMPRSS11E (ENSPLOG00000010409) Tiger MODERN SPECIES 33 ADGRL3 (ENSPTIG00000003603) #22 ENSPTIG00000003381 Cat MODERN SPECIES 235 CEP135 (ENSFCAG00000014189) CRACD (ENSFCAG00000006569) AASDH (ENSFCAG00000006574) PPAT (ENSFCAG00000026916) PAICS (ENSFCAG00000028186) SRP72 (ENSFCAG00000027600) ARL9 (ENSFCAG00000001942) THEGL (ENSFCAG00000023281) HOPX (ENSFCAG00000032905) ENSFCAG00000036073 REST (ENSFCAG00000046155) NOA1 (ENSFCAG00000024100) POLR2B (ENSFCAG00000003905) IGFBP7 (ENSFCAG00000025634) ENSFCAG00000047897 ADGRL3 (ENSFCAG00000006176) #22 ENSFCAG00000038361 TECRL (ENSFCAG00000031818) ENSFCAG00000029750 EPHA5 (ENSFCAG00000022711) ENSFCAG00000048739 CENPC (ENSFCAG00000027045) STAP1 (ENSFCAG00000036406) UBA6 (ENSFCAG00000006160) GNRHR (ENSFCAG00000001379) ENSFCAG00000022155 TMPRSS11D (ENSFCAG00000013916) TMPRSS11A (ENSFCAG00000022368) ENSFCAG00000028242 TMPRSS11F (ENSFCAG00000008114) ENSFCAG00000023948 Caniformia ANCESTRAL SPECIES 7 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.m ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Canidae ANCESTRAL SPECIES 51 ENSGT00940000159453 ENSGT00940000154277.a.b.b ENSGT00940000161471 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.m ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153169.A.b.b.a.a.a.b.l.g.a Canis_lupus ANCESTRAL SPECIES 19 ENSGT00440000033811 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397 ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.m ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00390000006370.h.b ENSGT00940000153096.b.c.b.b.g.b ENSGT00940000154277.a.b.a.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000161786 ENSGT00940000155803 ENSGT00940000153169.A.b.b.a.a.a.b.l.g.a Dingo MODERN SPECIES 2 PAICS (ENSCAFG00020027386) SRP72 (ENSCAFG00020027338) ARL9 (ENSCAFG00020027325) THEGL (ENSCAFG00020027324) ENSCAFG00020027323 ENSCAFG00020027322 ENSCAFG00020027320 NOA1 (ENSCAFG00020027319) POLR2B (ENSCAFG00020027317) IGFBP7 (ENSCAFG00020027316) ENSCAFG00020027315 ENSCAFG00020027313 ENSCAFG00020027312 ENSCAFG00020027310 ENSCAFG00020027309 ADGRL3 (ENSCAFG00020027216) #22 TECRL (ENSCAFG00020027208) EPHA5 (ENSCAFG00020027199) ENSCAFG00020027180 CENPC (ENSCAFG00020027175) UBA6 (ENSCAFG00020027143) GNRHR (ENSCAFG00020027129) ENSCAFG00020027128 TMPRSS11D (ENSCAFG00020027124) TMPRSS11A (ENSCAFG00020027122) ENSCAFG00020027120 TMPRSS11F (ENSCAFG00020027118) ENSCAFG00020027117 TMPRSS11E (ENSCAFG00020027116) YTHDC1 (ENSCAFG00020027112) ENSCAFG00020027109 Dog MODERN SPECIES 4 PPAT (ENSCAFG00845013561) ENSCAFG00845013641 SRP72 (ENSCAFG00845013778) ARL9 (ENSCAFG00845013838) ENSCAFG00845013850 THEGL (ENSCAFG00845013867) SPINK2 (ENSCAFG00845013914) REST (ENSCAFG00845013968) NOA1 (ENSCAFG00845013997) POLR2B (ENSCAFG00845014082) ENSCAFG00845014179 ENSCAFG00845014210 ENSCAFG00845014237 ENSCAFG00845014244 ENSCAFG00845014256 ADGRL3 (ENSCAFG00845014364) #22 TECRL (ENSCAFG00845005649) EPHA5 (ENSCAFG00845006153) ENSCAFG00845007153 CENPC (ENSCAFG00845007271) STAP1 (ENSCAFG00845007408) UBA6 (ENSCAFG00845007757) GNRHR (ENSCAFG00845008435) ENSCAFG00845008485 ENSCAFG00845008566 ENSCAFG00845008657 TMPRSS11A (ENSCAFG00845008712) ENSCAFG00845008764 ENSCAFG00845008806 ENSCAFG00845008866 YTHDC1 (ENSCAFG00845009010) Red fox MODERN SPECIES 46 PPAT (ENSVVUG00000006040) ENSVVUG00000006031 SRP72 (ENSVVUG00000006020) ARL9 (ENSVVUG00000006013) THEGL (ENSVVUG00000006009) HOPX (ENSVVUG00000006003) REST (ENSVVUG00000005996) NOA1 (ENSVVUG00000005990) POLR2B (ENSVVUG00000005979) ENSVVUG00000005970 ENSVVUG00000005965 ENSVVUG00000005944 ENSVVUG00000005920 ENSVVUG00000005913 ENSVVUG00000005897 ADGRL3 (ENSVVUG00000005842) #22 ENSVVUG00000005812 TECRL (ENSVVUG00000005794) ENSVVUG00000005779 ENSVVUG00000005771 EPHA5 (ENSVVUG00000005740) ENSVVUG00000005709 CENPC (ENSVVUG00000005676) STAP1 (ENSVVUG00000005660) UBA6 (ENSVVUG00000005554) GNRHR (ENSVVUG00000005544) ENSVVUG00000005529 TMPRSS11D (ENSVVUG00000005505) TMPRSS11A (ENSVVUG00000005490) ENSVVUG00000005470 TMPRSS11F (ENSVVUG00000005460) Caniformia_b ANCESTRAL SPECIES 5 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397.d ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.m ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Ursidae ANCESTRAL SPECIES 29 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397.d ENSGT00940000154630.b ENSGT00390000017143 ENSGT00530000064285 ENSGT00940000155341.h.m ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a.n ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 Giant Panda MODERN SPECIES 2 PPAT (ENSAMEG00000008404) ENSAMEG00000008439 SRP72 (ENSAMEG00000008469) ARL9 (ENSAMEG00000008523) THEGL (ENSAMEG00000008530) HOPX (ENSAMEG00000028847) ENSAMEG00000030748 REST (ENSAMEG00000008541) NOA1 (ENSAMEG00000008549) POLR2B (ENSAMEG00000008561) IGFBP7 (ENSAMEG00000027871) ENSAMEG00000028017 ENSAMEG00000027622 ENSAMEG00000027775 ENSAMEG00000002409 ADGRL3 (ENSAMEG00000017533) #22 TECRL (ENSAMEG00000000546) EPHA5 (ENSAMEG00000006286) CENPC (ENSAMEG00000003458) STAP1 (ENSAMEG00000003467) UBA6 (ENSAMEG00000003476) ENSAMEG00000003525 TMPRSS11D (ENSAMEG00000003527) TMPRSS11A (ENSAMEG00000014084) ENSAMEG00000014066 TMPRSS11F (ENSAMEG00000014061) ENSAMEG00000024995 ENSAMEG00000005629 ENSAMEG00000005661 ENSAMEG00000005688 ENSAMEG00000027162 Ursus ANCESTRAL SPECIES 51 ENSGT00940000159453 ENSGT00940000161471 ENSGT00440000033811 ENSGT00940000164461 ENSGT00390000003428 ENSGT00390000010172 ENSGT00390000013264.d ENSGT00940000159397.d ENSGT00940000154630.b ENSGT00980000200333 ENSGT00530000064285 ENSGT00940000155341.h.m ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a.n ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 Polar bear MODERN SPECIES 234 PPAT (ENSUMAG00000007982) ENSUMAG00000007988 ENSUMAG00000007992 PAICS (ENSUMAG00000008003) SRP72 (ENSUMAG00000008151) ARL9 (ENSUMAG00000008158) THEGL (ENSUMAG00000008173) ENSUMAG00000008192 ENSUMAG00000008198 REST (ENSUMAG00000008208) NOA1 (ENSUMAG00000008221) POLR2B (ENSUMAG00000008247) IGFBP7 (ENSUMAG00000008408) ENSUMAG00000008434 ENSUMAG00000008450 ADGRL3 (ENSUMAG00000008678) #22 ENSUMAG00000009580 TECRL (ENSUMAG00000009582) ENSUMAG00000009602 EPHA5 (ENSUMAG00000009646) Mustelinae ANCESTRAL SPECIES 73 ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT01050000244841.A.a.a ENSGT00940000163237 ENSGT00940000161719 ENSGT00940000161698 ENSGT00940000163094 ENSGT00940000161680 ENSGT00940000163621 ENSGT00940000163500 ENSGT00940000161786 ENSGT00940000155803 American mink MODERN SPECIES 128 ADGRL3 (ENSNVIG00000017945) #22 ENSNVIG00000018955 ENSNVIG00000018961 TECRL (ENSNVIG00000018974) EPHA5 (ENSNVIG00000019023) Ferret MODERN SPECIES 266 ADGRL3 (ENSMPUG00000001363) #22 TECRL (ENSMPUG00000001474) ENSMPUG00000001481 EPHA5 (ENSMPUG00000001506) ENSMPUG00000001522 ENSMPUG00000001546 ENSMPUG00000001550 CENPC (ENSMPUG00000001554) STAP1 (ENSMPUG00000001601) UBA6 (ENSMPUG00000001636) ENSMPUG00000001649 TMPRSS11D (ENSMPUG00000001673) TMPRSS11A (ENSMPUG00000001680) ENSMPUG00000001688 TMPRSS11F (ENSMPUG00000001691) ENSMPUG00000001701 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000155527 #22 Hedgehog MODERN SPECIES 4593 ADGRL3 (ENSEEUG00000007324) #22 Common shrew MODERN SPECIES 3543 ADGRL3 (ENSSARG00000009955) #22 Sauria ANCESTRAL SPECIES 41 ENSGT00530000063205.B ENSGT00940000159475 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000163094 ENSGT00940000163237.b ENSGT00940000155803 ENSGT00940000153212 ENSGT00940000161344 ENSGT00710000108331 ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b Lepidosauria ANCESTRAL SPECIES ENSGT00940000155527 #22 Episquamata ANCESTRAL SPECIES 6 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000166488 ENSGT00940000156605 ENSGT00940000157596 ENSGT00940000157498 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00930000151041 ENSGT00940000155527 #22 ENSGT00390000009978 ENSGT00940000157871 ENSGT00950000183204.a ENSGT01050000244950.a.a.a ENSGT00640000091497.a.o ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000154334.k ENSGT00390000006207 ENSGT00390000010091.d ENSGT00390000015759 ENSGT00390000009110 ENSGT00550000074787 ENSGT00390000011553 Toxicofera ANCESTRAL SPECIES 6 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000166488 ENSGT00940000156605 ENSGT00940000157596 ENSGT00940000157498 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00930000151041 ENSGT00940000155527 #22 ENSGT00390000009978 ENSGT00950000183204.a ENSGT01050000244950.a.a.a ENSGT00640000091497.a.o ENSGT00390000011053 ENSGT00940000154826 ENSGT00390000006207 ENSGT00390000010091.d ENSGT00390000015759 ENSGT00390000009110 ENSGT00550000074787 ENSGT00390000011553 ENSGT00940000159540 ENSGT00940000158694 ENSGT00950000182906.b.b Elapidae ANCESTRAL SPECIES 28 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000166488 ENSGT00940000156605 ENSGT00940000157596 ENSGT00940000157498 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00930000151041 ENSGT00940000155527 #22 ENSGT00390000009978 ENSGT00950000183204.a ENSGT01050000244950.a.a.a ENSGT00640000091497.a.o ENSGT00390000011053.m ENSGT00940000154826 ENSGT00390000010091.d.e ENSGT00390000015759 ENSGT00390000009110 ENSGT00550000074787 ENSGT00390000011553 ENSGT00940000159540 ENSGT00940000158694 ENSGT00950000182906.b.b.c ENSGT00390000016696 Elapidae_a ANCESTRAL SPECIES 47 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000166488 ENSGT00940000156605 ENSGT00940000157596 ENSGT00940000157498 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00930000151041 ENSGT00940000155527 #22 ENSGT00390000009978 ENSGT00950000183204.a ENSGT01050000244950.a.a.a ENSGT00640000091497.a.o ENSGT00390000011053.m ENSGT00940000154826 ENSGT00390000010091.d.e ENSGT00390000015759 ENSGT00390000009110 ENSGT00550000074787 ENSGT00390000011553 ENSGT00940000159540 ENSGT00940000158694 ENSGT00950000182906.b.b.c ENSGT00390000016696 Acanthophiinae ANCESTRAL SPECIES 44 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000166488 ENSGT00940000156605 ENSGT00940000157596 ENSGT00940000157498 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00930000151041 ENSGT00940000155527 #22 ENSGT00390000009978 ENSGT00950000183204.a ENSGT01050000244950.a.a.a ENSGT00990000212465 ENSGT00390000011053.m ENSGT00940000154826 ENSGT00390000010091.d.e ENSGT00390000015759 ENSGT00390000009110 ENSGT00550000074787 ENSGT00390000011553 ENSGT00940000159540 ENSGT00940000158694 ENSGT00950000182906.b.b.c ENSGT00390000016696 Eastern brown snake MODERN SPECIES 59 RBP5 (ENSPTXG00000014427) CLSTN3 (ENSPTXG00000014428) ENSPTXG00000014474 PEX5 (ENSPTXG00000014475) CASR (ENSPTXG00000014476) MAN1A2 (ENSPTXG00000014480) ENSPTXG00000014484 ENSPTXG00000014485 HAO2 (ENSPTXG00000014487) WARS2 (ENSPTXG00000014488) TBX15 (ENSPTXG00000014489) WDR3 (ENSPTXG00000014493) GDAP2 (ENSPTXG00000014505) TENT5C (ENSPTXG00000014507) DUSP12 (ENSPTXG00000014508) ADGRL3 (ENSPTXG00000014510) #22 SYCE3 (ENSPTXG00000014514) FBXO40 (ENSPTXG00000014515) KPNA1 (ENSPTXG00000014517) ENSPTXG00000014519 MIX23 (ENSPTXG00000014520) CSTB (ENSPTXG00000014522) ENSPTXG00000014523 SIDT1 (ENSPTXG00000014543) USF3 (ENSPTXG00000014618) NAA50 (ENSPTXG00000014619) ATP6V1A (ENSPTXG00000014620) ENSPTXG00000014621 ENSPTXG00000014625 POLQ (ENSPTXG00000014632) STXBP5L (ENSPTXG00000014640) Mainland tiger snake MODERN SPECIES 73 CLSTN3 (ENSNSUG00000018900) ENSNSUG00000018901 PEX5 (ENSNSUG00000018902) CASR (ENSNSUG00000018903) MAN1A2 (ENSNSUG00000018904) ENSNSUG00000018907 ENSNSUG00000018908 HAO2 (ENSNSUG00000018909) WARS2 (ENSNSUG00000018910) TBX15 (ENSNSUG00000018911) ENSNSUG00000018918 WDR3 (ENSNSUG00000018919) GDAP2 (ENSNSUG00000018928) TENT5C (ENSNSUG00000018929) DUSP12 (ENSNSUG00000018930) ADGRL3 (ENSNSUG00000018933) #22 SYCE3 (ENSNSUG00000019126) FBXO40 (ENSNSUG00000019127) KPNA1 (ENSNSUG00000019128) ENSNSUG00000019129 ENSNSUG00000019130 MIX23 (ENSNSUG00000019131) CSTB (ENSNSUG00000019133) SIDT1 (ENSNSUG00000019137) USF3 (ENSNSUG00000019139) NAA50 (ENSNSUG00000019140) ATP6V1A (ENSNSUG00000019141) ENSNSUG00000019142 ENSNSUG00000019143 POLQ (ENSNSUG00000019145) STXBP5L (ENSNSUG00000019146) Indian cobra MODERN SPECIES 1 ENSNNAG00000013195 PEX5 (ENSNNAG00000013133) CASR (ENSNNAG00000013066) ENSNNAG00000013041 MAN1A2 (ENSNNAG00000012533) ENSNNAG00000012456 HAO2 (ENSNNAG00000012011) WARS2 (ENSNNAG00000011957) TBX15 (ENSNNAG00000011914) ENSNNAG00000011903 WDR3 (ENSNNAG00000011692) GDAP2 (ENSNNAG00000011633) TENT5C (ENSNNAG00000011621) ENSNNAG00000011598 DUSP12 (ENSNNAG00000011574) ADGRL3 (ENSNNAG00000010410) #22 SYCE3 (ENSNNAG00000010305) FBXO40 (ENSNNAG00000010257) KPNA1 (ENSNNAG00000010144) ENSNNAG00000010113 MIX23 (ENSNNAG00000010078) CSTB (ENSNNAG00000010061) SIDT1 (ENSNNAG00000009747) USF3 (ENSNNAG00000009674) NAA50 (ENSNNAG00000009634) ATP6V1A (ENSNNAG00000009284) ENSNNAG00000009235 ENSNNAG00000009199 POLQ (ENSNNAG00000008643) STXBP5L (ENSNNAG00000007934) GTF2E1 (ENSNNAG00000007877) Lizard MODERN SPECIES 3 ENSACAG00000014095 ENSACAG00000041645 ENSACAG00000042744 ACTR5 (ENSACAG00000014155) PPP1R16B (ENSACAG00000014183) ENSACAG00000014264 FAM83D (ENSACAG00000038167) DHX35 (ENSACAG00000014298) ENSACAG00000045290 ENSACAG00000022716 ENSACAG00000000160 PHTF1 (ENSACAG00000000153) RSBN1 (ENSACAG00000000150) PTPN22 (ENSACAG00000000141) ENSACAG00000044404 ENSACAG00000014335 #22 ENSACAG00000028253 ENSACAG00000009750 ENSACAG00000009733 ENSACAG00000042738 ENSACAG00000009716 ENSACAG00000009714 ENSACAG00000009634 ENSACAG00000009508 NCOA6 (ENSACAG00000009455) TP53INP2 (ENSACAG00000043363) ENSACAG00000029573 ENSACAG00000042586 PIGU (ENSACAG00000009379) ENSACAG00000044135 MAP1LC3A (ENSACAG00000009374) Laterata ANCESTRAL SPECIES 7 ENSGT00940000162526 ENSGT00950000183086.a.b ENSGT00940000166488 ENSGT00940000156605 ENSGT00940000157596 ENSGT00940000157498 ENSGT00940000155444 ENSGT00390000018717.b.a.b ENSGT00940000153724.A ENSGT00940000159013 ENSGT00390000013693 ENSGT00940000153859.a ENSGT00940000156336 ENSGT00940000158856 ENSGT00930000151041 ENSGT00940000155527 #22 ENSGT00390000009978 ENSGT00940000157871 ENSGT00950000183204.a ENSGT01050000244950.a.a.a ENSGT00640000091497.a.o ENSGT00390000011053 ENSGT00940000155717 ENSGT00940000154826 ENSGT00940000154334.k ENSGT00390000006207 ENSGT00390000010091.d ENSGT00390000015759 ENSGT00390000009110 ENSGT00550000074787 ENSGT00390000011553 Argentine black and white tegu MODERN SPECIES 45 ING4 (ENSSMRG00000019106) ENSSMRG00000019105 ENSSMRG00000019103 LPAR5 (ENSSMRG00000019102) CHD4 (ENSSMRG00000011880) NOP2 (ENSSMRG00000011771) IFFO1 (ENSSMRG00000011735) GAPDH (ENSSMRG00000011286) NCAPD2 (ENSSMRG00000011275) MRPL51 (ENSSMRG00000011274) VAMP1 (ENSSMRG00000011272) SCNN1A (ENSSMRG00000011262) ENSSMRG00000011255 DUSP12 (ENSSMRG00000011206) ENSSMRG00000011202 ADGRL3 (ENSSMRG00000011162) #22 SYCE3 (ENSSMRG00000011083) STYK1 (ENSSMRG00000011080) FBXO40 (ENSSMRG00000011079) KPNA1 (ENSSMRG00000011078) FAM162A (ENSSMRG00000011077) MIX23 (ENSSMRG00000011076) ENSSMRG00000011070 CSTB (ENSSMRG00000011069) TRIM45 (ENSSMRG00000011066) SPICE1 (ENSSMRG00000011063) ENSSMRG00000011055 SIDT1 (ENSSMRG00000009599) USF3 (ENSSMRG00000009595) NAA50 (ENSSMRG00000009591) ATP6V1A (ENSSMRG00000009588) Common wall lizard MODERN SPECIES 8 ENSPMRG00000017999 PEX5 (ENSPMRG00000017982) CASR (ENSPMRG00000017969) ENSPMRG00000017962 MAN1A2 (ENSPMRG00000017944) ENSPMRG00000017936 HAO2 (ENSPMRG00000017927) WARS2 (ENSPMRG00000017917) TBX15 (ENSPMRG00000017904) SPAG17 (ENSPMRG00000017877) ENSPMRG00000017860 GDAP2 (ENSPMRG00000017853) TENT5C (ENSPMRG00000017846) DUSP12 (ENSPMRG00000017838) ENSPMRG00000017820 ADGRL3 (ENSPMRG00000017771) #22 SYCE3 (ENSPMRG00000017755) KPNA1 (ENSPMRG00000017742) ENSPMRG00000017733 MIX23 (ENSPMRG00000017722) ENSPMRG00000017714 ENSPMRG00000017698 TRIM45 (ENSPMRG00000017687) SPICE1 (ENSPMRG00000017674) SIDT1 (ENSPMRG00000017309) USF3 (ENSPMRG00000017225) NAA50 (ENSPMRG00000017218) ATP6V1A (ENSPMRG00000017201) ENSPMRG00000017187 ENSPMRG00000017180 POLQ (ENSPMRG00000017034) tuatara MODERN SPECIES 925 ADGRL3 (ENSSPUG00000004099) #22 ENSSPUG00000004265 MPP3 (ENSSPUG00000004278) CFAP97D1 (ENSSPUG00000004291) ENSSPUG00000004305 DUSP3 (ENSSPUG00000004321) SOST (ENSSPUG00000004349) MEOX1 (ENSSPUG00000004355) ETV4 (ENSSPUG00000004363) DHX8 (ENSSPUG00000004382) TMEM106A (ENSSPUG00000004416) NBR1 (ENSSPUG00000004424) ENSSPUG00000004452 RND2 (ENSSPUG00000004483) VAT1 (ENSSPUG00000004531) ENSSPUG00000004537 Archelosauria ANCESTRAL SPECIES 41 ENSGT00530000063205.B ENSGT00940000159475 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000163094 ENSGT00940000163237.b ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000153212.i.b ENSGT00940000161344 ENSGT00710000108331 ENSGT00940000153212.j Cryptodira ANCESTRAL SPECIES 2 ENSGT00530000063205.B ENSGT00940000159475 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000163237.b ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000153212.i.b ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b ENSGT00390000000436 Testudinoidea ANCESTRAL SPECIES 18 ENSGT00940000159066 ENSGT00940000156161.B ENSGT00940000159475 ENSGT00530000063205.B ENSGT00940000158928.a ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT01030000235960 ENSGT00940000163237.b ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000153212.i.b ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b Testudinidae ANCESTRAL SPECIES 20 ENSGT00390000017143 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT01030000235960 ENSGT00940000163237.b ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000153212.i.b.a ENSGT00940000153212.j ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b Goode s thornscrub tortoise MODERN SPECIES 19 ERI1 (ENSGEVG00005017077) MFHAS1 (ENSGEVG00005017057) ENSGEVG00005017033 ENSGEVG00005016993 HOPX (ENSGEVG00005016964) ENSGEVG00005016930 ENSGEVG00005016891 ENSGEVG00005016855 LEPROTL1 (ENSGEVG00005016824) SARAF (ENSGEVG00005016802) REST (ENSGEVG00005016790) NOA1 (ENSGEVG00005016763) POLR2B (ENSGEVG00005016711) IGFBP7 (ENSGEVG00005016562) ENSGEVG00005016531 ADGRL3 (ENSGEVG00005013835) #22 TECRL (ENSGEVG00005013258) EPHA5 (ENSGEVG00005012017) ENSGEVG00005011775 STAP1 (ENSGEVG00005011670) UBA6 (ENSGEVG00005011605) ENSGEVG00005011551 ENSGEVG00005011429 YTHDC1 (ENSGEVG00005011353) ENSGEVG00005011272 ENSGEVG00005011211 ENSGEVG00005011169 ENSGEVG00005011143 ENSGEVG00005011083 ENSGEVG00005010738 SLC20A2 (ENSGEVG00005010652) Abingdon island giant tortoise MODERN SPECIES 1833 ADGRL3 (ENSCABG00000005441) #22 ENSCABG00000005383 ENSCABG00000005380 Emydidae ANCESTRAL SPECIES 27 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT01030000235960 ENSGT00940000163237.b ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b ENSGT00390000000436 Three-toed box turtle MODERN SPECIES 63 ENSTMTG00000003256 ENSTMTG00000003250 ARL9 (ENSTMTG00000003236) SRP72 (ENSTMTG00000003207) LEPROTL1 (ENSTMTG00000003201) SARAF (ENSTMTG00000003190) REST (ENSTMTG00000003182) NOA1 (ENSTMTG00000003040) POLR2B (ENSTMTG00000002999) IGFBP7 (ENSTMTG00000009128) ADGRL3 (ENSTMTG00000009042) #22 ENSTMTG00000009020 TECRL (ENSTMTG00000009008) EPHA5 (ENSTMTG00000008493) ENSTMTG00000008436 STAP1 (ENSTMTG00000008399) UBA6 (ENSTMTG00000008361) ENSTMTG00000008329 ENSTMTG00000008278 YTHDC1 (ENSTMTG00000008208) ENSTMTG00000008153 ENSTMTG00000008133 SLC20A2 (ENSTMTG00000008107) SMIM19 (ENSTMTG00000008095) HGSNAT (ENSTMTG00000007958) INTS10 (ENSTMTG00000007876) painted turtle MODERN SPECIES 2395 ARL9 (ENSCPBG00000015019) SRP72 (ENSCPBG00000015015) LEPROTL1 (ENSCPBG00000015012) SARAF (ENSCPBG00000015011) REST (ENSCPBG00000015010) NOA1 (ENSCPBG00000015009) POLR2B (ENSCPBG00000015003) IGFBP7 (ENSCPBG00000014997) ADGRL3 (ENSCPBG00000010997) #22 ENSCPBG00000010844 Chinese turtle MODERN SPECIES 1423 TNKS (ENSPSIG00000003346) DUSP4 (ENSPSIG00000003314) ENSPSIG00000001564 ENSPSIG00000003208 HOPX (ENSPSIG00000003195) ENSPSIG00000003184 ARL9 (ENSPSIG00000003180) SRP72 (ENSPSIG00000003003) LEPROTL1 (ENSPSIG00000003002) SARAF (ENSPSIG00000003001) REST (ENSPSIG00000002988) NOA1 (ENSPSIG00000002984) POLR2B (ENSPSIG00000002973) IGFBP7 (ENSPSIG00000002972) ADGRL3 (ENSPSIG00000002943) #22 TECRL (ENSPSIG00000002930) EPHA5 (ENSPSIG00000002880) ENSPSIG00000002875 STAP1 (ENSPSIG00000002857) UBA6 (ENSPSIG00000002826) ENSPSIG00000002822 YTHDC1 (ENSPSIG00000002782) ENSPSIG00000002749 Archosauria ANCESTRAL SPECIES 47 ENSGT00530000063205.B ENSGT00940000159475 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000163094 ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000153212.i.b ENSGT00940000161344 ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b Australian saltwater crocodile MODERN SPECIES 32 MFHAS1 (ENSCPRG00005006769) ERI1 (ENSCPRG00005006766) PPP1R3B (ENSCPRG00005006757) ENSCPRG00005006755 TNKS (ENSCPRG00005006562) DUSP4 (ENSCPRG00005006529) ENSCPRG00005006515 ENSCPRG00005006512 ARL9 (ENSCPRG00005006511) LEPROTL1 (ENSCPRG00005006506) SARAF (ENSCPRG00005006501) REST (ENSCPRG00005006500) NOA1 (ENSCPRG00005006497) POLR2B (ENSCPRG00005006491) IGFBP7 (ENSCPRG00005006488) ADGRL3 (ENSCPRG00005006447) #22 TECRL (ENSCPRG00005006413) EPHA5 (ENSCPRG00005006383) ENSCPRG00005006374 ENSCPRG00005006358 STAP1 (ENSCPRG00005006341) UBA6 (ENSCPRG00005006308) ENSCPRG00005006277 ENSCPRG00005006271 ENSCPRG00005006267 YTHDC1 (ENSCPRG00005006252) ENSCPRG00005006248 ENSCPRG00005006244 UGT2A1 (ENSCPRG00005006241) SULT1B1 (ENSCPRG00005006235) SLC20A2 (ENSCPRG00005006224) Aves ANCESTRAL SPECIES 39 ENSGT00530000063205.B ENSGT00940000158928 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000161786 ENSGT00940000163094 ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000161344 ENSGT00940000161848 ENSGT00940000162879 ENSGT00390000014879.c.b African ostrich MODERN SPECIES 924 REST (ENSSCUG00000016974) SARAF (ENSSCUG00000016976) LEPROTL1 (ENSSCUG00000016977) SRP72 (ENSSCUG00000016978) ARL9 (ENSSCUG00000016979) THEGL (ENSSCUG00000016981) ENSSCUG00000016982 DUSP4 (ENSSCUG00000016987) TNKS (ENSSCUG00000016990) MFHAS1 (ENSSCUG00000017011) ERI1 (ENSSCUG00000017012) PPP1R3B (ENSSCUG00000017014) PRAG1 (ENSSCUG00000017015) MBOAT4 (ENSSCUG00000017017) ENSSCUG00000017018 ADGRL3 (ENSSCUG00000017032) #22 TECRL (ENSSCUG00000017069) Neognathae ANCESTRAL SPECIES 42 ENSGT00530000063205.B ENSGT00940000158928 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000154630.b ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000161786 ENSGT00940000163094 ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000161344 ENSGT00940000161848 ENSGT00940000162879 Neognathae_b ANCESTRAL SPECIES 4 ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000153510.b ENSGT00940000155881 ENSGT01030000235152.b ENSGT00940000161474.b.a ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000163094 ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000161344 ENSGT00940000161848 ENSGT00940000162879 ENSGT00940000157357 ENSGT01050000244968.c ENSGT00390000010950 Neognathae_c ANCESTRAL SPECIES 3 ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000153510.b ENSGT00940000155881 ENSGT01030000235152.b ENSGT00940000161474.b.a ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00940000156266 ENSGT00390000016737 ENSGT00530000063841.a ENSGT00940000158826 ENSGT00940000163237.a ENSGT00940000163094 ENSGT00940000155803 ENSGT00940000153212.i.a ENSGT00940000161344 ENSGT00940000161848 ENSGT00940000162879 ENSGT00940000157357 ENSGT01050000244968.c ENSGT00390000010950 Golden eagle MODERN SPECIES AFF1 (ENSACCG00020000855) PTPN13 (ENSACCG00020000760) MAPK10 (ENSACCG00020000508) ARHGAP24 (ENSACCG00020000481) COPS4 (ENSACCG00020000442) LIN54 (ENSACCG00020000408) THAP9 (ENSACCG00020000344) SEC31A (ENSACCG00020000311) SCD5 (ENSACCG00020000289) TMEM150C (ENSACCG00020000287) ENOPH1 (ENSACCG00020000285) HNRNPDL (ENSACCG00020000282) HNRNPD (ENSACCG00020000280) PRKG2 (ENSACCG00020008438) RASGEF1B (ENSACCG00020008416) ADGRL3 (ENSACCG00020007900) #22 TECRL (ENSACCG00020007181) EPHA5 (ENSACCG00020007129) ENSACCG00020007089 STAP1 (ENSACCG00020007053) UBA6 (ENSACCG00020007008) ENSACCG00020006976 ENSACCG00020006952 YTHDC1 (ENSACCG00020006920) ENSACCG00020006867 UGT2A1 (ENSACCG00020006847) ENSACCG00020006836 ENSACCG00020006815 ENSACCG00020006795 SH2D4A (ENSACCG00020006781) CSGALNACT1 (ENSACCG00020006767) Kakapo MODERN SPECIES 24 PTPN13 (ENSSHBG00005015414) MAPK10 (ENSSHBG00005015385) ARHGAP24 (ENSSHBG00005015377) COPS4 (ENSSHBG00005015370) LIN54 (ENSSHBG00005015363) ENSSHBG00005015348 THAP9 (ENSSHBG00005015342) SEC31A (ENSSHBG00005015303) SCD5 (ENSSHBG00005015283) TMEM150C (ENSSHBG00005015275) ENOPH1 (ENSSHBG00005015270) HNRNPDL (ENSSHBG00005015265) HNRNPD (ENSSHBG00005015257) PRKG2 (ENSSHBG00005015246) RASGEF1B (ENSSHBG00005015237) ADGRL3 (ENSSHBG00005015214) #22 TECRL (ENSSHBG00005015184) ENSSHBG00005015176 EPHA5 (ENSSHBG00005015150) ENSSHBG00005015115 UBA6 (ENSSHBG00005015098) ENSSHBG00005015064 ENSSHBG00005015046 ENSSHBG00005015040 YTHDC1 (ENSSHBG00005014993) ENSSHBG00005014975 ENSSHBG00005014969 ENSSHBG00005012544 ENSSHBG00005012309 ENSSHBG00005011901 SH2D4A (ENSSHBG00005011848) Passeriformes ANCESTRAL SPECIES 4 ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000153510.b ENSGT00940000155881 ENSGT01030000235152.b ENSGT00940000161474.b.a ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000163989.a.a ENSGT00610000087446 ENSGT00390000015889 ENSGT00940000165755 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B Great tit MODERN SPECIES 23 PTPN13 (ENSPMJG00000008868) MAPK10 (ENSPMJG00000008874) ARHGAP24 (ENSPMJG00000008878) COPS4 (ENSPMJG00000008880) LIN54 (ENSPMJG00000008881) ENSPMJG00000008884 THAP9 (ENSPMJG00000008885) SEC31A (ENSPMJG00000008886) SCD5 (ENSPMJG00000008889) TMEM150C (ENSPMJG00000008891) ENOPH1 (ENSPMJG00000008892) HNRNPDL (ENSPMJG00000008893) HNRNPD (ENSPMJG00000008894) PRKG2 (ENSPMJG00000008895) RASGEF1B (ENSPMJG00000008900) ADGRL3 (ENSPMJG00000008911) #22 TECRL (ENSPMJG00000008928) NOA1 (ENSPMJG00000008929) POLR2B (ENSPMJG00000008930) IGFBP7 (ENSPMJG00000009066) ENSPMJG00000009067 PIGY (ENSPMJG00000009070) HERC3 (ENSPMJG00000009098) FAM13A (ENSPMJG00000009116) GPRIN3 (ENSPMJG00000009120) SNCA (ENSPMJG00000009156) MMRN1 (ENSPMJG00000009159) CCSER1 (ENSPMJG00000009264) ENSPMJG00000009313 GRID2 (ENSPMJG00000009354) SMARCAD1 (ENSPMJG00000009360) Passeriformes_d ANCESTRAL SPECIES 4 ENSGT00950000182974.a.b ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000161474.b.a ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000163989.a.a ENSGT00610000087446 ENSGT00390000015889 ENSGT00940000165755 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B Flycatcher MODERN SPECIES 22 ENSFALG00000026078 ENSFALG00000005594 ENSFALG00000027555 COPS4 (ENSFALG00000005615) LIN54 (ENSFALG00000005636) THAP9 (ENSFALG00000005646) SEC31A (ENSFALG00000005662) SCD5 (ENSFALG00000027094) ENSFALG00000026606 TMEM150C (ENSFALG00000025686) ENOPH1 (ENSFALG00000023501) HNRNPDL (ENSFALG00000005709) HNRNPD (ENSFALG00000005716) ENSFALG00000005750 ENSFALG00000005794 ENSFALG00000005821 #22 ENSFALG00000004548 ENSFALG00000005866 NOA1 (ENSFALG00000005875) ENSFALG00000005896 IGFBP7 (ENSFALG00000005947) PIGY (ENSFALG00000025429) PYURF (ENSFALG00000005966) ENSFALG00000027174 HERC3 (ENSFALG00000005987) FAM13A (ENSFALG00000006052) ENSFALG00000028299 GPRIN3 (ENSFALG00000014847) SNCA (ENSFALG00000006059) MMRN1 (ENSFALG00000006063) CCSER1 (ENSFALG00000006067) Passeriformes_g ANCESTRAL SPECIES 5 ENSGT00950000182974.a.b ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000161474.b.a ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000163989.a.a ENSGT00610000087446 ENSGT00390000015889 ENSGT00940000165755 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00950000183033.a.a.c.b ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B Passeroidea ANCESTRAL SPECIES 4 ENSGT00950000182974.a.b ENSGT00940000155133.b ENSGT00940000153692.A ENSGT00950000183015.D ENSGT00940000153510.b ENSGT00940000155881 ENSGT00940000161474.b.a ENSGT00390000003175.a.b ENSGT00940000162090 ENSGT01030000234578.A.a ENSGT00440000039914 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000159393 ENSGT00940000155816.b ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00610000087446 ENSGT00390000015889 ENSGT00940000165755 ENSGT00940000158189 ENSGT00950000183033.a.b.a ENSGT00570000079168.b.b.b ENSGT00950000183175.B.b ENSGT01030000234633.C.b ENSGT00940000153912.B ENSGT00530000064550.A ENSGT00940000155192 Common canary MODERN SPECIES 2 MAPK10 (ENSSCAG00000014944) ENSSCAG00000014936 ARHGAP24 (ENSSCAG00000014921) COPS4 (ENSSCAG00000014904) LIN54 (ENSSCAG00000014887) THAP9 (ENSSCAG00000014880) SEC31A (ENSSCAG00000014849) SCD5 (ENSSCAG00000014829) TMEM150C (ENSSCAG00000014818) ENOPH1 (ENSSCAG00000014815) HNRNPDL (ENSSCAG00000014805) HNRNPD (ENSSCAG00000014795) PRKG2 (ENSSCAG00000014755) RASGEF1B (ENSSCAG00000014735) ENSSCAG00000014728 ADGRL3 (ENSSCAG00000014607) #22 TECRL (ENSSCAG00000014561) NOA1 (ENSSCAG00000014555) POLR2B (ENSSCAG00000014545) IGFBP7 (ENSSCAG00000014540) PIGY (ENSSCAG00000014533) PYURF (ENSSCAG00000014529) ENSSCAG00000014523 HERC3 (ENSSCAG00000014518) ENSSCAG00000014504 ENSSCAG00000014497 GPRIN3 (ENSSCAG00000014492) SNCA (ENSSCAG00000014487) MMRN1 (ENSSCAG00000014484) CCSER1 (ENSSCAG00000014474) ENSSCAG00000014466 Zebra finch MODERN SPECIES 25 PTPN13 (ENSTGUG00000002745) MAPK10 (ENSTGUG00000002750) ARHGAP24 (ENSTGUG00000002761) ENSTGUG00000019709 COPS4 (ENSTGUG00000002775) LIN54 (ENSTGUG00000002794) THAP9 (ENSTGUG00000002802) SEC31A (ENSTGUG00000002804) SCD5 (ENSTGUG00000002833) TMEM150C (ENSTGUG00000002839) ENOPH1 (ENSTGUG00000002842) HNRNPDL (ENSTGUG00000002850) HNRNPD (ENSTGUG00000002858) PRKG2 (ENSTGUG00000002872) RASGEF1B (ENSTGUG00000002879) ADGRL3 (ENSTGUG00000002891) #22 TECRL (ENSTGUG00000002909) NOA1 (ENSTGUG00000022978) POLR2B (ENSTGUG00000002929) PYURF (ENSTGUG00000020882) ENSTGUG00000002963 HERC3 (ENSTGUG00000002965) FAM13A (ENSTGUG00000003051) SNCA (ENSTGUG00000003065) MMRN1 (ENSTGUG00000003084) CCSER1 (ENSTGUG00000003088) ENSTGUG00000003096 GRID2 (ENSTGUG00000003097) ATOH1 (ENSTGUG00000003126) SMARCAD1 (ENSTGUG00000003127) HPGDS (ENSTGUG00000003144) Medium ground finch MODERN SPECIES 7 PTPN13 (ENSGFOG00000009062) MAPK10 (ENSGFOG00000009107) ENSGFOG00000002492 ARHGAP24 (ENSGFOG00000003395) COPS4 (ENSGFOG00000003436) LIN54 (ENSGFOG00000003503) THAP9 (ENSGFOG00000003529) SEC31A (ENSGFOG00000003559) SCD5 (ENSGFOG00000003653) TMEM150C (ENSGFOG00000003664) ENOPH1 (ENSGFOG00000003680) HNRNPDL (ENSGFOG00000003691) HNRNPD (ENSGFOG00000003725) PRKG2 (ENSGFOG00000003750) RASGEF1B (ENSGFOG00000003809) ADGRL3 (ENSGFOG00000003862) #22 ENSGFOG00000004217 TECRL (ENSGFOG00000004225) POLR2B (ENSGFOG00000004234) IGFBP7 (ENSGFOG00000004256) ENSGFOG00000004272 PIGY (ENSGFOG00000004281) PYURF (ENSGFOG00000004286) HERC3 (ENSGFOG00000004318) FAM13A (ENSGFOG00000004346) ENSGFOG00000004356 GPRIN3 (ENSGFOG00000004368) SNCA (ENSGFOG00000004372) MMRN1 (ENSGFOG00000004378) CCSER1 (ENSGFOG00000004390) GRID2 (ENSGFOG00000004415) Galloanserae ANCESTRAL SPECIES 45 ENSGT00940000159475 ENSGT00530000063205.B ENSGT00940000158928 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b Anatidae ANCESTRAL SPECIES 77 ENSGT00530000063205.B ENSGT00940000158928 ENSGT00940000156161.B ENSGT00940000159066 ENSGT01030000235125 ENSGT00390000017143 ENSGT00940000159397 ENSGT00390000013264 ENSGT00390000006503.b ENSGT00390000013419 ENSGT00940000155341.h ENSGT00390000001695 ENSGT00950000183132.C ENSGT00530000063555.A.a.a ENSGT00940000161512 ENSGT00940000155527 #22 ENSGT00950000182886.a.b Pink-footed goose MODERN SPECIES 103 MFHAS1 (ENSABRG00000008021) TNKS (ENSABRG00000008028) DUSP4 (ENSABRG00000008034) ENSABRG00000008047 HOPX (ENSABRG00000008060) ARL9 (ENSABRG00000008072) SRP72 (ENSABRG00000008097) LEPROTL1 (ENSABRG00000008122) SARAF (ENSABRG00000008133) REST (ENSABRG00000008149) NOA1 (ENSABRG00000008153) POLR2B (ENSABRG00000008157) IGFBP7 (ENSABRG00000008184) HIPK4 (ENSABRG00000008266) ENSABRG00000008281 ADGRL3 (ENSABRG00000008284) #22 TECRL (ENSABRG00000008363) Duck MODERN SPECIES 22 ENSAPLG00000011521 PRAG1 (ENSAPLG00000011900) ERI1 (ENSAPLG00000012159) TNKS (ENSAPLG00000002335) DUSP4 (ENSAPLG00000015125) ENSAPLG00000001677 ARL9 (ENSAPLG00000008732) SRP72 (ENSAPLG00000008751) LEPROTL1 (ENSAPLG00000020400) SARAF (ENSAPLG00000009337) REST (ENSAPLG00000009372) POLR2B (ENSAPLG00000009560) NOA1 (ENSAPLG00000026782) IGFBP7 (ENSAPLG00000024839) HIPK4 (ENSAPLG00000017887) ADGRL3 (ENSAPLG00000002668) #22 TECRL (ENSAPLG00000004528) MICU3 (ENSAPLG00000012995) FGF20 (ENSAPLG00000017099) TUSC3 (ENSAPLG00000013401) ENSAPLG00000024633 SGCZ (ENSAPLG00000013589) SLC20A2 (ENSAPLG00000013621) SMIM19 (ENSAPLG00000000735) POMK (ENSAPLG00000013912) HGSNAT (ENSAPLG00000014020) INTS10 (ENSAPLG00000014036) CSGALNACT1 (ENSAPLG00000014335) SH2D4A (ENSAPLG00000014421) CDKL2 (ENSAPLG00000014440) RCHY1 (ENSAPLG00000014976) Phasianidae ANCESTRAL SPECIES 2 ENSGT00940000158010 ENSGT00940000157329.u.a ENSGT00940000157329.u.b ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.a.h ENSGT01030000234574.B.c.a.g ENSGT00940000160897 ENSGT00940000158223 ENSGT00940000155680.d ENSGT00940000156633 ENSGT00940000175002 ENSGT00940000155527 #22 ENSGT00960000190971 ENSGT00950000182886.a.b ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341.h ENSGT00390000013419 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00940000159397 ENSGT00390000017143 ENSGT01030000235125 ENSGT00940000159066 ENSGT00940000156161.B ENSGT00940000158928 Japanese quail MODERN SPECIES 22 HNRNPDL (ENSCJPG00005010049) HNRNPD (ENSCJPG00005010050) PLAC8 (ENSCJPG00005010051) COQ2 (ENSCJPG00005010052) HPSE (ENSCJPG00005010053) HELQ (ENSCJPG00005010173) ENSCJPG00005010174 ABRAXAS1 (ENSCJPG00005010175) ENSCJPG00005010176 ENSCJPG00005010177 NKX6-1 (ENSCJPG00005010178) CDS1 (ENSCJPG00005010179) WDFY3 (ENSCJPG00005010349) PPM1K (ENSCJPG00005010601) ENSCJPG00005010602 ADGRL3 (ENSCJPG00005010611) #22 ENSCJPG00005010612 TECRL (ENSCJPG00005010619) IGFBP7 (ENSCJPG00005010620) POLR2B (ENSCJPG00005010621) NOA1 (ENSCJPG00005010623) REST (ENSCJPG00005010624) SARAF (ENSCJPG00005010625) LEPROTL1 (ENSCJPG00005010626) SRP72 (ENSCJPG00005010629) ARL9 (ENSCJPG00005010630) HOPX (ENSCJPG00005010631) ENSCJPG00005010632 DUSP4 (ENSCJPG00005010633) TNKS (ENSCJPG00005010649) MFHAS1 (ENSCJPG00005011200) Phasianidae_b ANCESTRAL SPECIES 4 ENSGT00940000154426 ENSGT00940000158010 ENSGT00940000157329.u.a ENSGT00940000157329.u.b ENSGT00940000153771.B ENSGT00390000004874.a.b ENSGT00940000157350 ENSGT00940000165965 ENSGT00530000063424.b ENSGT01030000234574.B.c.a.h ENSGT01030000234574.B.c.a.g ENSGT00940000160897 ENSGT00940000158223 ENSGT00940000155680.d ENSGT00940000156633 ENSGT00940000155527 #22 ENSGT00950000182886.a.b ENSGT00530000063555.A.a.a ENSGT00950000183132.C ENSGT00390000001695 ENSGT00940000155341.h ENSGT00390000013419 ENSGT00390000006503.b ENSGT00390000013264 ENSGT00940000159397 ENSGT00390000017143 ENSGT01030000235125 ENSGT00940000159066 ENSGT00940000156161.B ENSGT00940000158928 ENSGT00530000063205.B Chicken MODERN SPECIES 33 HNRNPD (ENSGALG00010004018) PLAC8L1 (ENSGALG00010003227) PLACL2 (ENSGALG00010003240) COQ2 (ENSGALG00010002483) HPSE (ENSGALG00010002522) MRPS18C (ENSGALG00010002565) HELQ (ENSGALG00010002576) ENSGALG00010002553 FAM175A (ENSGALG00010002588) ENSGALG00010004963 GPAT3 (ENSGALG00010002614) ENSGALG00010003453 CDS1 (ENSGALG00010003456) WDFY3 (ENSGALG00010003507) PPM1K (ENSGALG00010003531) ADGRL3 (ENSGALG00010003560) #22 TECRL (ENSGALG00010003632) ENSGALG00010004496 IGFBP7 (ENSGALG00010003660) POLR2B (ENSGALG00010003676) NOA1 (ENSGALG00010003695) REST (ENSGALG00010003700) SARAF (ENSGALG00010003701) LEPROTL1 (ENSGALG00010003717) SRP72 (ENSGALG00010003737) ARL9 (ENSGALG00010003743) HOPX (ENSGALG00010003746) ENSGALG00010003765 DUSP4 (ENSGALG00010002994) TNKS (ENSGALG00010003009) MFHAS1 (ENSGALG00010003025) Turkey DUPLICATION Turkey MODERN SPECIES 24 ENSMGAG00000009045 ENSMGAG00000008806 ENSMGAG00000008814 turkinh1 (ENSMGAG00000008602) ENSMGAG00000018170 ENSMGAG00000008600 SRP72 (ENSMGAG00000008567) ENSMGAG00000008541 ENSMGAG00000008565 ENSMGAG00000008531 ENSMGAG00000008481 ENSMGAG00000008468 ENSMGAG00000008465 ENSMGAG00000022122 ENSMGAG00000008384 #22 ENSMGAG00000018258 #22 ENSMGAG00000020831 ENSMGAG00000008373 ENSMGAG00000019638 ENSMGAG00000021084 ENSMGAG00000020442 ENSMGAG00000008230 ENSMGAG00000020569 ENSMGAG00000018801 ENSMGAG00000008154 ENSMGAG00000018661 ENSMGAG00000008078 ENSMGAG00000008112 ENSMGAG00000008136 ABRAXAS1 (ENSMGAG00000008138) ENSMGAG00000019128 Turkey MODERN SPECIES 24 ENSMGAG00000009106 ENSMGAG00000009045 ENSMGAG00000008806 ENSMGAG00000008814 turkinh1 (ENSMGAG00000008602) ENSMGAG00000018170 ENSMGAG00000008600 SRP72 (ENSMGAG00000008567) ENSMGAG00000008541 ENSMGAG00000008565 ENSMGAG00000008531 ENSMGAG00000008481 ENSMGAG00000008468 ENSMGAG00000008465 ENSMGAG00000022122 ENSMGAG00000008384 #22 ENSMGAG00000018258 #22 ENSMGAG00000020831 ENSMGAG00000008373 ENSMGAG00000019638 ENSMGAG00000021084 ENSMGAG00000020442 ENSMGAG00000008230 ENSMGAG00000020569 ENSMGAG00000018801 ENSMGAG00000008154 ENSMGAG00000018661 ENSMGAG00000008078 ENSMGAG00000008112 ENSMGAG00000008136 ABRAXAS1 (ENSMGAG00000008138) Elephant shark MODERN SPECIES 1636 SH2D4A (ENSCMIG00000016054) CSGALNACT1 (ENSCMIG00000016050) ENSCMIG00000016049 ENSCMIG00000016047 ENSCMIG00000016045 ENSCMIG00000016012 ADGRL3 (ENSCMIG00000015727) #22 Cyclostomata ANCESTRAL SPECIES ENSGT00940000155527 #22 Hagfish DUPLICATION Hagfish MODERN SPECIES 1303 ENSEBUG00000003554 ENSEBUG00000010571 ENSEBUG00000006060 ENSEBUG00000014059 ENSEBUG00000015545 #22 ENSEBUG00000014908 ENSEBUG00000001014 ENSEBUG00000012295 Hagfish MODERN SPECIES 752 ENSEBUG00000000519 acot9.2 (ENSEBUG00000011311) ENSEBUG00000003158 ENSEBUG00000015098 ENSEBUG00000011291 ENSEBUG00000016064 ENSEBUG00000000655 ENSEBUG00000013470 ENSEBUG00000008973 #22