Actinopterygii ANCESTRAL SPECIES 503 ENSGT00390000011749 ENSGT00410000029064 ENSGT00940000159617 ENSGT00390000017890 ENSGT00940000155527 #22 ENSGT00990000203806 Neopterygii ANCESTRAL SPECIES 112 ENSGT00940000163785.a.b ENSGT00940000154810 ENSGT00940000154259 ENSGT00940000163988 ENSGT00940000156061 ENSGT00940000160757 ENSGT01100000263500.b.a.a.a.a.b.b.b.a.a ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.D ENSGT00940000155804 ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527 #22 ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT00390000017890 ENSGT00940000159617 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000001491.a ENSGT00390000010434.a ENSGT00940000168370 ENSGT00390000012556 ENSGT00940000155475.h ENSGT00940000153395.a ENSGT00940000159954 ENSGT00940000159769.b ENSGT00530000063821.b.b Osteoglossocephalai DUPLICATION Osteoglossocephalai DUPLICATION Osteoglossocephalai ANCESTRAL SPECIES 383 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.D ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00990000203806 Clupeocephala ANCESTRAL SPECIES 693 ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a Otomorpha ANCESTRAL SPECIES 590 ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Characiphysae ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Characiphysae_b ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Characoidei ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Mexicana tetra MODERN SPECIES 686 ENSAMXG00000029314 ENSAMXG00000042086 #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000155527.j.b.b #22 Goldfish MODERN SPECIES 47 drd4b (ENSCARG00000038266) sirt3 (ENSCARG00000038292) ENSCARG00000038344 ZNF319 (ENSCARG00000038361) csnk2a2a (ENSCARG00000038409) MATCAP1 (ENSCARG00000039132) nqo1 (ENSCARG00000039143) zgc:194679 (ENSCARG00000039163) ENSCARG00000039175 dpep1 (ENSCARG00000039193) sult5a1 (ENSCARG00000039225) ENSCARG00000039244 dhodh (ENSCARG00000039302) ENSCARG00000039427 ENSCARG00000039440 ENSCARG00000039445 #22 ENSCARG00000039467 ENSCARG00000039474 mrpl21 (ENSCARG00000039552) HECTD4 (ENSCARG00000039804) ENSCARG00000044376 ENSCARG00000044435 ENSCARG00000044608 ENSCARG00000044632 ENSCARG00000044646 ENSCARG00000044658 tollip (ENSCARG00000044691) slc35c1 (ENSCARG00000044803) RASGRP2 (ENSCARG00000044820) ENSCARG00000045529 ywhae2 (ENSCARG00000045609) Otophysi ANCESTRAL SPECIES 257 ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A ENSGT00940000155527.j.b.a ##22 ENSGT00990000203806.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a Characiphysae ANCESTRAL SPECIES 126 ENSGT00940000157846.c ENSGT00390000011433.s.a ENSGT00390000007723 ENSGT00530000063603.B ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A ENSGT00940000155527.j.b.a ##22 ENSGT00990000203806.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a.o ENSGT00950000183130.A ENSGT00940000165569 ENSGT00940000153617.C.c Channel catfish MODERN SPECIES 21 ecpas (ENSIPUG00000003055) smc2 (ENSIPUG00000003173) exoc1l (ENSIPUG00000003212) GPR75 (ENSIPUG00000003220) Erlec1 (ENSIPUG00000003229) CHRNA9 (ENSIPUG00000003284) Rhoh (ENSIPUG00000003288) n4bp2 (ENSIPUG00000003296) pds5a (ENSIPUG00000003326) Ube2k (ENSIPUG00000003431) smim14 (ENSIPUG00000003455) ugdh (ENSIPUG00000003462) lias (ENSIPUG00000003506) rpl9 (ENSIPUG00000003557) rfc1 (ENSIPUG00000003606) ADGRL3 (ENSIPUG00000003757) ##22 ENSIPUG00000003791 gtf2e2 (ENSIPUG00000003793) smim18 (ENSIPUG00000003809) qdprb.1 (ENSIPUG00000003819) LDB2 (ENSIPUG00000003862) tapt1 (ENSIPUG00000003883) prom1b (ENSIPUG00000003916) fgfbp2b (ENSIPUG00000004100) ENSIPUG00000004122 anxa5b (ENSIPUG00000004143) Uchl1 (ENSIPUG00000004303) ENSIPUG00000004378 ENSIPUG00000004391 ENSIPUG00000004404 ENSIPUG00000004434 Characiphysae_b ANCESTRAL SPECIES 131 ENSGT00940000157846.c ENSGT00390000011433.s.a ENSGT00390000007723 ENSGT00530000063603.B ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A ENSGT00940000155527.j.b.a ##22 ENSGT00990000203806.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a.o ENSGT00950000183130.A ENSGT00940000165569 ENSGT00940000153617.C.c Electric eel MODERN SPECIES 217 THBS2 (ENSEEEG00000008855) PSME4 (ENSEEEG00000008838) GPR75 (ENSEEEG00000008837) erlec1 (ENSEEEG00000008834) CHRNA9 (ENSEEEG00000008832) rhoh (ENSEEEG00000008831) n4bp2 (ENSEEEG00000008830) pds5a (ENSEEEG00000006970) ube2kb (ENSEEEG00000006896) smim14 (ENSEEEG00000006892) ugdh (ENSEEEG00000006889) lias (ENSEEEG00000006847) rpl9 (ENSEEEG00000006842) rfc1 (ENSEEEG00000006584) ENSEEEG00000006582 ADGRL3 (ENSEEEG00000006456) ##22 Characoidei ANCESTRAL SPECIES 155 ENSGT00940000157846.c ENSGT00390000011433.s.a ENSGT00390000007723 ENSGT00530000063603.B ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A.c ENSGT00940000155527.j.b.a ##22 ENSGT00990000203806.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00950000183159.a.v.a.o ENSGT00950000183130.A ENSGT00940000165569 ENSGT00940000153617.C.d Red-bellied piranha MODERN SPECIES 243 PSME4 (ENSPNAG00000028254) GPR75 (ENSPNAG00000027792) erlec1 (ENSPNAG00000027770) ENSPNAG00000005964 CHRNA9 (ENSPNAG00000027649) rhoh (ENSPNAG00000027615) n4bp2 (ENSPNAG00000027604) pds5a (ENSPNAG00000006831) ube2kb (ENSPNAG00000027487) smim14 (ENSPNAG00000004233) ugdh (ENSPNAG00000027414) lias (ENSPNAG00000027333) rpl9 (ENSPNAG00000027318) rfc1 (ENSPNAG00000027262) ENSPNAG00000027246 ADGRL3 (ENSPNAG00000006104) ##22 ENSPNAG00000026718 gtf2e2 (ENSPNAG00000026699) smim18 (ENSPNAG00000026666) qdprb.4 (ENSPNAG00000026656) Mexicana tetra MODERN SPECIES 13 GPR75 (ENSAMXG00000025271) erlec1 (ENSAMXG00000021660) CHRNA9 (ENSAMXG00000021659) rhoh (ENSAMXG00000025269) n4bp2 (ENSAMXG00000021658) pds5a (ENSAMXG00000021657) ube2kb (ENSAMXG00000034571) smim14 (ENSAMXG00000031990) ugdh (ENSAMXG00000021654) lias (ENSAMXG00000018746) rpl9 (ENSAMXG00000041237) rfc1 (ENSAMXG00000021652) ENSAMXG00000038437 ENSAMXG00000037739 ENSAMXG00000040505 ADGRL3 (ENSAMXG00000021645) ##22 ENSAMXG00000037417 smim18 (ENSAMXG00000025268) gtf2e2 (ENSAMXG00000021633) qdprb.4 (ENSAMXG00000035389) ldb2b (ENSAMXG00000021629) tapt1b (ENSAMXG00000013101) prom1b (ENSAMXG00000021625) fgfbp2b (ENSAMXG00000021623) ENSAMXG00000021622 ENSAMXG00000037179 PTPRD (ENSAMXG00000021621) ENSAMXG00000035941 ENSAMXG00000035944 TYRP1 (ENSAMXG00000021619) LURAP1L (ENSAMXG00000042695) Cyprinoidei ANCESTRAL SPECIES 9 ENSGT00940000162414.l.b ENSGT00390000001577 ENSGT00530000063669.a ENSGT00390000013015 ENSGT00940000156077.g.b ENSGT00940000160078 ENSGT00940000164462 ENSGT00940000155155 ENSGT00670000098059.d ENSGT00390000018294 ENSGT00390000015355 ENSGT00390000006234 ENSGT00390000015224.d ENSGT00730000111066 ENSGT00940000155586.A.f ENSGT00940000155527.j.b.a ##22 ENSGT00990000203806.a ENSGT00410000029064.c ENSGT00390000011749 ENSGT00390000000470.m ENSGT00390000005639.a.a.n ENSGT00390000010628.a ENSGT00530000063586.b.c.a ENSGT00940000153820.a ENSGT00940000154372.a.a.b ENSGT00940000154372.a.b.a ENSGT00940000155988.c ENSGT00940000157306 ENSGT00940000158708.a ENSGT00940000158062.f.a ENSGT00940000156892.b Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES 15 ENSGT00940000162414.l.b.b.a ENSGT00390000001577.e ENSGT00530000063669.a.c ENSGT00390000013015.b ENSGT00940000156077.g.b.j ENSGT00940000160078.c ENSGT00940000164462.a ENSGT00940000155155.l ENSGT00670000098059.d.a ENSGT00390000018294.r ENSGT00390000015355.fb.a ENSGT00390000006234.u ENSGT00390000015224.d.i.b ENSGT00730000111066.b ENSGT00940000155586.A.f.b.b ENSGT00940000155527.j.b.a.a ##22 ENSGT00990000203806.a ENSGT00940000156077.g.b.i ENSGT00940000160078.d ENSGT00940000164462.b ENSGT00940000155155.k ENSGT00670000098059.d.b ENSGT00390000018294.q ENSGT00390000015355.fb.b ENSGT00390000006234.v ENSGT00390000015224.d.i.a ENSGT00730000111066.a ENSGT00940000155586.A.f.b.a ENSGT00940000155527.j.b.a.b ##22 ENSGT00390000011749.n ENSGT00410000029064.c Goldfish MODERN SPECIES 18 nsun3 (ENSCARG00000067299) ENSCARG00000067295 ENSCARG00000067292 ENSCARG00000067276 CHRNA9 (ENSCARG00000067245) rhoh (ENSCARG00000067231) n4bp2 (ENSCARG00000067215) pds5a (ENSCARG00000063506) ube2kb (ENSCARG00000063152) smim14 (ENSCARG00000063129) ugdh (ENSCARG00000063108) lias (ENSCARG00000063079) rpl9 (ENSCARG00000063053) rfc1 (ENSCARG00000062345) ENSCARG00000062117 ADGRL3 (ENSCARG00000054019) ##22 SMIM18 (ENSCARG00000053785) gtf2e2 (ENSCARG00000053751) QDPR (ENSCARG00000053337) ldb2b (ENSCARG00000053284) tapt1b (ENSCARG00000052960) prom1b (ENSCARG00000052536) fgfbp2b (ENSCARG00000052451) ENSCARG00000052434 anxa5b (ENSCARG00000050409) uchl1 (ENSCARG00000050215) ENSCARG00000050181 chrna6 (ENSCARG00000050107) chrnb3a (ENSCARG00000050064) ENSCARG00000049956 DNAH6 (ENSCARG00000048724) Cyprininae_a ANCESTRAL SPECIES 48 ENSGT00940000162414.l.b.b.a ENSGT00390000001577.e ENSGT00530000063669.a.c ENSGT00390000013015.b ENSGT00940000156077.g.b.j ENSGT00940000160078.c ENSGT00940000164462.a ENSGT00940000155155.l ENSGT00670000098059.d.a ENSGT00390000018294.r ENSGT00390000015355.fb.a ENSGT00390000006234.u ENSGT00390000015224.d.i.b ENSGT00730000111066.b ENSGT00940000155586.A.f.b.b ENSGT00940000155527.j.b.a.a ##22 ENSGT00990000203806.a ENSGT00410000029064.c.a ENSGT00390000011749.m ENSGT00390000000470.m.a.a ENSGT00390000005639.a.a.n.a ENSGT00390000010628.a.a ENSGT00530000063586.b.c.a.c ENSGT00940000154372.a.a.b.d ENSGT00940000154372.a.b.a.e ENSGT00940000155988.c.e ENSGT00940000157306.bb ENSGT00940000158708.a.c ENSGT00940000158062.f.a.b ENSGT00940000156892.b.a ENSGT00940000154617.A.a.a.g Common carp reference MODERN SPECIES 27 fam184b (ENSCCRG00000021314) ENSCCRG00000057613 ENSCCRG00000054891 ENSCCRG00000077705 CHRNA9 (ENSCCRG00000022278) rhoh (ENSCCRG00000080203) n4bp2 (ENSCCRG00000022271) pds5a (ENSCCRG00000021444) smim14 (ENSCCRG00000073429) ube2kb (ENSCCRG00000073522) ugdh (ENSCCRG00000051328) lias (ENSCCRG00000078037) rpl9 (ENSCCRG00000051304) rfc1 (ENSCCRG00000051229) ENSCCRG00000006500 ENSCCRG00000025312 ##22 smim18 (ENSCCRG00000064068) gtf2e2 (ENSCCRG00000046595) QDPR (ENSCCRG00000079710) ldb2b (ENSCCRG00000072395) tapt1b (ENSCCRG00000008631) prom1b (ENSCCRG00000008593) fgfbp2b (ENSCCRG00000025013) ENSCCRG00000043514 anxa5b (ENSCCRG00000015853) uchl1 (ENSCCRG00000076852) ENSCCRG00000044241 chrna6 (ENSCCRG00000044235) chrnb3a (ENSCCRG00000023089) ENSCCRG00000023112 ENSCCRG00000023148 Golden-line barbel MODERN SPECIES 345 CHRNA9 (ENSSGRG00000027586) rhoh (ENSSGRG00000027585) n4bp2 (ENSSGRG00000027583) pds5a (ENSSGRG00000022515) ube2kb (ENSSGRG00000022408) smim14 (ENSSGRG00000022406) ENSSGRG00000022405 rpl9 (ENSSGRG00000022403) lias (ENSSGRG00000022029) rfc1 (ENSSGRG00000021184) ENSSGRG00000021177 ENSSGRG00000021046 ##22 ENSSGRG00000021045 smim18 (ENSSGRG00000021044) gtf2e2 (ENSSGRG00000021002) QDPR (ENSSGRG00000021001) ldb2b (ENSSGRG00000021000) tapt1b (ENSSGRG00000020999) prom1b (ENSSGRG00000020992) zmynd10 (ENSSGRG00000020990) ENSSGRG00000020989 anxa5b (ENSSGRG00000020348) uchl1 (ENSSGRG00000020340) ENSSGRG00000020270 chrna6 (ENSSGRG00000020268) chrnb3a (ENSSGRG00000020267) ENSSGRG00000020094 Cyprininae ANCESTRAL SPECIES 15 ENSGT00730000111066.b ENSGT00940000155586.A.f.b.b ENSGT00940000155527.j.b.a.a ##22 ENSGT00990000203806.a ENSGT00940000156077.g.b.i ENSGT00940000160078.d ENSGT00940000164462.b ENSGT00940000155155.k ENSGT00670000098059.d.b ENSGT00390000018294.q ENSGT00390000015355.fb.b ENSGT00390000006234.v ENSGT00390000015224.d.i.a ENSGT00730000111066.a ENSGT00940000155586.A.f.b.a ENSGT00940000155527.j.b.a.b ##22 ENSGT00390000011749.n ENSGT00410000029064.c ENSGT00390000011749.m ENSGT00390000000470.m.a ENSGT00390000005639.a.a.n.a ENSGT00390000010628.a.a ENSGT00530000063586.b.c.a.c ENSGT00940000154372.a.a.b.d ENSGT00940000154372.a.b.a.e ENSGT00940000155988.c.e ENSGT00940000157306.bb ENSGT00940000158708.a.c ENSGT00940000158062.f.a.b ENSGT00940000156892.b.a ENSGT00940000154617.A.a.a.g Goldfish DUPLICATION Goldfish MODERN SPECIES ncapg (ENSCARG00000027836) fam184b (ENSCARG00000027813) ENSCARG00000027805 CHRNA9 (ENSCARG00000027798) rhoh (ENSCARG00000027789) n4bp2 (ENSCARG00000027721) pds5a (ENSCARG00000027541) ube2kb (ENSCARG00000027513) smim14 (ENSCARG00000027501) ugdh (ENSCARG00000027366) lias (ENSCARG00000027319) rpl9 (ENSCARG00000027281) rfc1 (ENSCARG00000024417) ENSCARG00000024272 ENSCARG00000024253 ADGRL3 (ENSCARG00000019085) ##22 gtf2e2 (ENSCARG00000018918) QDPR (ENSCARG00000018910) ldb2b (ENSCARG00000018853) tapt1b (ENSCARG00000018629) prom1b (ENSCARG00000017683) zmynd10 (ENSCARG00000017609) fgfbp2b (ENSCARG00000017601) ENSCARG00000017591 anxa5b (ENSCARG00000017462) uchl1 (ENSCARG00000017417) ENSCARG00000017407 chrna3 (ENSCARG00000017362) frg1 (ENSCARG00000017342) asah1b (ENSCARG00000017142) pcm1 (ENSCARG00000013572) Goldfish MODERN SPECIES ENSCARG00000024185 ncapg (ENSCARG00000024093) ENSCARG00000024074 CHRNA9 (ENSCARG00000024028) rhoh (ENSCARG00000024021) n4bp2 (ENSCARG00000023995) pds5a (ENSCARG00000021147) ube2kb (ENSCARG00000020988) smim14 (ENSCARG00000020976) ugdh (ENSCARG00000020905) lias (ENSCARG00000020659) rpl9 (ENSCARG00000020624) rfc1 (ENSCARG00000020175) ENSCARG00000020137 ENSCARG00000062384 ADGRL3 (ENSCARG00000048241) ##22 smim18 (ENSCARG00000047638) gtf2e2 (ENSCARG00000047612) QDPR (ENSCARG00000047565) ldb2b (ENSCARG00000047533) ENSCARG00000047525 tapt1b (ENSCARG00000047132) prom1b (ENSCARG00000046930) zmynd10 (ENSCARG00000046852) fgfbp2b (ENSCARG00000046844) ENSCARG00000046842 anxa5b (ENSCARG00000046386) sh3gl2a (ENSCARG00000046301) ENSCARG00000046268 ENSCARG00000046222 coro2aa (ENSCARG00000046092) Cyprininae_a ANCESTRAL SPECIES 138 ENSGT00390000001577.f ENSGT00530000063669.a.d ENSGT00390000013015.a ENSGT00940000156077.g.b.i ENSGT00940000160078.d ENSGT00940000164462.b ENSGT00940000155155.k ENSGT00670000098059.d.b ENSGT00390000018294.q ENSGT00390000015355.fb.b ENSGT00390000006234.v ENSGT00390000015224.d.i.a ENSGT00390000015224.d.j ENSGT00730000111066.a ENSGT00940000155586.A.f.b.a ENSGT00940000155527.j.b.a.b ##22 ENSGT00390000011749.n ENSGT00410000029064.c.b ENSGT00390000000470.m.b ENSGT00390000000470.m.a.b ENSGT00390000005639.a.a.n.b ENSGT00390000010628.a.b ENSGT00530000063586.b.c.a.d ENSGT00940000153820.a.c ENSGT00940000154372.a.a.b.c ENSGT00940000154372.a.b.a.f ENSGT00940000155988.c.f ENSGT00940000157306.cb ENSGT00940000158708.a.d ENSGT00940000158062.f.a.a ENSGT00940000156892.b.b Common carp reference MODERN SPECIES 22 ENSCCRG00000076387 ncapg (ENSCCRG00000021321) fam184b (ENSCCRG00000065912) ENSCCRG00000021307 CHRNA9 (ENSCCRG00000021301) rhoh (ENSCCRG00000078870) n4bp2 (ENSCCRG00000021294) pds5a (ENSCCRG00000000702) ube2kb (ENSCCRG00000071163) smim14 (ENSCCRG00000076776) ugdh (ENSCCRG00000078816) lias (ENSCCRG00000068790) rpl9 (ENSCCRG00000066350) rfc1 (ENSCCRG00000051363) ENSCCRG00000082674 ENSCCRG00000081359 ##22 gtf2e2 (ENSCCRG00000025033) QDPR (ENSCCRG00000046614) ldb2b (ENSCCRG00000012670) prom1b (ENSCCRG00000012693) zmynd10 (ENSCCRG00000008038) fgfbp2b (ENSCCRG00000081229) ENSCCRG00000008030 anxa5b (ENSCCRG00000024897) uchl1 (ENSCCRG00000076047) ENSCCRG00000046668 chrna6 (ENSCCRG00000046676) chrnb3a (ENSCCRG00000046691) ENSCCRG00000007351 kdm4c (ENSCCRG00000021612) ENSCCRG00000082535 Golden-line barbel MODERN SPECIES 827 ENSSGRG00000028026 rpl9 (ENSSGRG00000028027) rfc1 (ENSSGRG00000028033) ENSSGRG00000028036 ENSSGRG00000028073 ##22 gtf2e2 (ENSSGRG00000029288) smim18 (ENSSGRG00000029289) QDPR (ENSSGRG00000029290) ldb2b (ENSSGRG00000029296) tapt1b (ENSSGRG00000029485) prom1b (ENSSGRG00000029488) zmynd10 (ENSSGRG00000029492) fgfbp2b (ENSSGRG00000029513) ENSSGRG00000029514 anxa5b (ENSSGRG00000029527) uchl1 (ENSSGRG00000031070) ENSSGRG00000031071 chrna6 (ENSSGRG00000031073) chrnb3a (ENSSGRG00000031078) ENSSGRG00000031093 Zebrafish MODERN SPECIES ncapg (ENSDARG00000070109) fam184b (ENSDARG00000055099) ENSDARG00000092290 CHRNA9 (ENSDARG00000054680) rhoh (ENSDARG00000070121) n4bp2 (ENSDARG00000061451) pds5a (ENSDARG00000055022) ube2kb (ENSDARG00000013505) smim14 (ENSDARG00000005799) ugdh (ENSDARG00000019838) lias (ENSDARG00000022845) rpl9 (ENSDARG00000037350) ENSDARG00000116939 rfc1 (ENSDARG00000054799) ENSDARG00000094677 ADGRL3 (ENSDARG00000061121) ##22 smim18 (ENSDARG00000093064) gtf2e2 (ENSDARG00000012672) qdprb.1 (ENSDARG00000037378) ENSDARG00000116099 ldb2b (ENSDARG00000034896) tapt1b (ENSDARG00000061143) prom1b (ENSDARG00000034007) zmynd10 (ENSDARG00000002406) fgfbp2b (ENSDARG00000038056) ENSDARG00000091660 anxa5b (ENSDARG00000016470) uchl1 (ENSDARG00000026871) ENSDARG00000115778 chrna6 (ENSDARG00000055559) ENSDARG00000092275 Clupeiformes ANCESTRAL SPECIES 161 ENSGT00390000001577 ENSGT00940000162414 ENSGT00940000158402 ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00940000159617.c ENSGT00390000011749 ENSGT00410000029064 ENSGT00950000182936.a.a.b.a ENSGT00390000016644 ENSGT00390000017709 ENSGT00940000154986.b ENSGT00940000177316 ENSGT01080000257488 ENSGT00940000156323.c.a ENSGT00530000063614.a.b ENSGT00490000043413 ENSGT00940000155905.a ENSGT00940000155128.a.b.a.b Atlantic herring MODERN SPECIES 14 dnajb14 (ENSCHAG00000027840) TTC39B (ENSCHAG00000027842) snapc3 (ENSCHAG00000027847) psip1a (ENSCHAG00000027848) bnc2 (ENSCHAG00000027849) CNTLN (ENSCHAG00000002484) ENSCHAG00000002619 ENSCHAG00000002796 ENSCHAG00000002892 trmo (ENSCHAG00000003426) anp32b (ENSCHAG00000003481) coro2aa (ENSCHAG00000003554) slit2 (ENSCHAG00000004923) ENSCHAG00000013578 ENSCHAG00000013715 ENSCHAG00000013784 #22 ENSCHAG00000016781 DCTN6 (ENSCHAG00000016796) RBPMS (ENSCHAG00000016837) gtf2e2 (ENSCHAG00000016838) smim18 (ENSCHAG00000016942) FHIP1A (ENSCHAG00000016952) gatb (ENSCHAG00000016979) dctpp1 (ENSCHAG00000017533) ENSCHAG00000017552 FBXW7 (ENSCHAG00000017560) ENSCHAG00000018069 tmem154 (ENSCHAG00000018096) TLR2 (ENSCHAG00000018108) TMEM131L (ENSCHAG00000018111) mnd1 (ENSCHAG00000018130) Denticle herring MODERN SPECIES 14 sh3gl2a (ENSDCDG00000010885) ENSDCDG00000010875 trmo (ENSDCDG00000010846) anp32b (ENSDCDG00000010827) coro2aa (ENSDCDG00000009914) hadh (ENSDCDG00000009873) cyp2u1 (ENSDCDG00000025568) ncapg (ENSDCDG00000025503) ENSDCDG00000025476 slit2 (ENSDCDG00000015357) ENSDCDG00000014993 ENSDCDG00000014992 ENSDCDG00000014990 ENSDCDG00000014989 ENSDCDG00000014987 ENSDCDG00000012784 #22 ENSDCDG00000012718 ##22 ENSDCDG00000012716 smim18 (ENSDCDG00000012713) gtf2e2 (ENSDCDG00000012709) FHIP1A (ENSDCDG00000012706) dctpp1 (ENSDCDG00000012705) gatb (ENSDCDG00000012096) ENSDCDG00000012049 FBXW7 (ENSDCDG00000010161) tmem154 (ENSDCDG00000010085) TMEM131L (ENSDCDG00000010061) mnd1 (ENSDCDG00000010031) trim2a (ENSDCDG00000008767) FHDC1 (ENSDCDG00000008683) arfip1 (ENSDCDG00000008645) Euteleosteomorpha ANCESTRAL SPECIES 103 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00390000003601.b ENSGT01060000248860 ENSGT00940000157580.a.b ENSGT00940000160654 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g Protacanthopterygii ANCESTRAL SPECIES 159 ENSGT00390000003601.b ENSGT00940000157580.a.b ENSGT00940000160654 ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000153617.C.e.a ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000017890.b.a ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00980000201267 ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727 ENSGT00940000165832 ENSGT00940000157037.a.c.b ENSGT00940000164532.b ENSGT00940000164532.a ENSGT00940000156228.p ENSGT00940000167973 Northern pike MODERN SPECIES 24 chic2 (ENSELUG00000009642) fip1l1b (ENSELUG00000001280) kitb (ENSELUG00000009687) ENSELUG00000009271 CLOCK (ENSELUG00000001519) ENSELUG00000009792 exoc1l (ENSELUG00000009805) smc2 (ENSELUG00000009845) ecpas (ENSELUG00000009962) kdm4c (ENSELUG00000010046) ENSELUG00000001468 ENSELUG00000027629 ENSELUG00000026828 TYRP1 (ENSELUG00000010406) ENSELUG00000010446 ADGRL3 (ENSELUG00000010500) #22 ENSELUG00000031260 DCTN6 (ENSELUG00000010524) gtf2e2 (ENSELUG00000010556) smim18 (ENSELUG00000010534) ENSELUG00000010588 ENSELUG00000028012 rbpja (ENSELUG00000034120) ENSELUG00000026247 rbpja (ENSELUG00000010624) STIM2 (ENSELUG00000010815) ENSELUG00000027435 ENSELUG00000010919 ENSELUG00000010945 ENSELUG00000010981 ENSELUG00000028614 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Coho salmon MODERN SPECIES 36 hmx4 (ENSOKIG00005025373) ENSOKIG00005025350 CPZ (ENSOKIG00005025279) PI4K2B (ENSOKIG00005024998) ppp2r2ca (ENSOKIG00005024979) WFS1 (ENSOKIG00005024832) crmp1 (ENSOKIG00005024805) ENSOKIG00005024252 ENSOKIG00005044058 ENSOKIG00005044034 ENSOKIG00005044009 ENSOKIG00005043992 exosc9 (ENSOKIG00005043978) ENSOKIG00005043970 TYRP1 (ENSOKIG00005043867) ENSOKIG00005043845 #22 NOCT (ENSOKIG00005043798) ENSOKIG00005043717 NOCT (ENSOKIG00005043631) elf2b (ENSOKIG00005043556) RAB33B (ENSOKIG00005043544) ENSOKIG00005043519 ENSOKIG00005043498 SCOC (ENSOKIG00005043447) ENSOKIG00005043315 ENSOKIG00005043298 ENSOKIG00005043177 ENSOKIG00005043170 ENSOKIG00005043162 ENSOKIG00005043150 ENSOKIG00005043140 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ##22 ENSOMYG00000073461 #22 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 ENSOMYG00000069257 ENSOMYG00000035779 ENSOMYG00000039760 #22 ENSOMYG00000059560 Salmo ANCESTRAL SPECIES ENSGT00940000155527.j.b.c #22 Atlantic salmon MODERN SPECIES 639 ENSSSAG00000116345 #22 Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES ENSGT00940000155527.j.b.d.a #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000155527.j.b.d.a #22 Salmo ANCESTRAL SPECIES 273 ENSGT00940000155527.j.b.d.a #22 ENSGT00390000017890.b.a ENSGT00410000029064.a ENSGT00390000011749 ENSGT00410000029064.b ENSGT00390000001491.a.i ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l.d.a Atlantic salmon MODERN SPECIES 640 ENSSSAG00000107806 #22 ENSSSAG00000065203 SMIM18 (ENSSSAG00000120419) gtf2e2 (ENSSSAG00000040128) ENSSSAG00000035612 ENSSSAG00000112233 ENSSSAG00000004256 Huchen MODERN SPECIES 3691 ENSHHUG00000026208 #22 ENSHHUG00000026193 ENSHHUG00000026184 Salmoninae ANCESTRAL SPECIES 1037 ENSGT00940000155527.j.b.d.b #22 ENSGT00390000017890.b.a ENSGT00410000029064 ENSGT00390000011749 ENSGT01000000218684 Salmoninae_a ANCESTRAL SPECIES 254 ENSGT00940000155527.j.b.d.b #22 ENSGT00390000017890.b.a ENSGT00410000029064.a ENSGT00390000011749 ENSGT00410000029064.b Oncorhynchus ANCESTRAL SPECIES 144 ENSGT00940000155527.j.b.d.b #22 ENSGT00390000017890.b.a.l ENSGT00390000017890.b.a.k ENSGT00390000011749.q.a ENSGT00410000029064.a ENSGT00390000001491.a ENSGT00390000005197.a.cb.f.b.a ENSGT00940000165832.r.b ENSGT00940000157037.a.c.b ENSGT00940000164532.a ENSGT00940000164532.b.b ENSGT00940000156228.p ENSGT00940000167973.e.b.b.b Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 47 ENSOMYG00000059258 #22 ENSOMYG00000074253 ENSOMYG00000074924 ENSOMYG00000055128 ENSOMYG00000065159 ENSOMYG00000050874 ENSOMYG00000057321 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ##22 ENSOMYG00000073461 #22 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 ENSOMYG00000069257 ENSOMYG00000035779 ENSOMYG00000039760 #22 ENSOMYG00000059560 Oncorhynchus_a ANCESTRAL SPECIES 224 ENSGT00940000155527.j.b.d.b #22 ENSGT00390000017890.b.a.k ENSGT00390000011749.q.a ENSGT00410000029064.a ENSGT00390000001491.a ENSGT00390000000214.a.b.l.d.b ENSGT00940000157037.a.c.b ENSGT00940000164532.a ENSGT00940000164532.b.b ENSGT00940000156228.p ENSGT00940000167973.f.a Coho salmon MODERN SPECIES 1405 ENSOKIG00005049191 #22 DCTN6 (ENSOKIG00005049198) gtf2e2 (ENSOKIG00005049211) smim18 (ENSOKIG00005049217) ENSOKIG00005049228 ENSOKIG00005049263 ENSOKIG00005049322 ENSOKIG00005049577 Huchen MODERN SPECIES 6425 ENSHHUG00000025630 #22 Acanthomorphata ANCESTRAL SPECIES 40 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Cod DUPLICATION Cod MODERN SPECIES 16 ENSGMOG00000020022 usp43a (ENSGMOG00000027418) ENSGMOG00000023557 cfap52 (ENSGMOG00000018826) ENSGMOG00000024895 ENSGMOG00000022966 ENSGMOG00000018803 stx8 (ENSGMOG00000018789) ENSGMOG00000020061 ENSGMOG00000005339 ENSGMOG00000005282 ENSGMOG00000005228 ENSGMOG00000005206 ENSGMOG00000005190 ENSGMOG00000031432 ENSGMOG00000034123 #22 ENSGMOG00000023389 ENSGMOG00000025924 #22 SMIM18 (ENSGMOG00000005036) GTF2E2 (ENSGMOG00000005020) DCTN6 (ENSGMOG00000005001) ENSGMOG00000004969 rbpja (ENSGMOG00000004951) ENSGMOG00000004792 ENSGMOG00000000689 ENSGMOG00000031805 ENSGMOG00000026775 ENSGMOG00000034682 ENSGMOG00000025853 ENSGMOG00000025268 ENSGMOG00000033539 Cod MODERN SPECIES 16 ENSGMOG00000023557 cfap52 (ENSGMOG00000018826) ENSGMOG00000024895 ENSGMOG00000022966 ENSGMOG00000018803 stx8 (ENSGMOG00000018789) ENSGMOG00000020061 ENSGMOG00000005339 ENSGMOG00000005282 ENSGMOG00000005228 ENSGMOG00000005206 ENSGMOG00000005190 ENSGMOG00000031432 ENSGMOG00000034123 #22 ENSGMOG00000023389 ENSGMOG00000025924 #22 SMIM18 (ENSGMOG00000005036) GTF2E2 (ENSGMOG00000005020) DCTN6 (ENSGMOG00000005001) ENSGMOG00000004969 rbpja (ENSGMOG00000004951) ENSGMOG00000004792 ENSGMOG00000000689 ENSGMOG00000031805 ENSGMOG00000026775 ENSGMOG00000034682 ENSGMOG00000025853 ENSGMOG00000025268 ENSGMOG00000033539 ENSGMOG00000009655 ENSGMOG00000006707 Euacanthomorphacea ANCESTRAL SPECIES 3 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT00940000154757.xb.b ENSGT00940000163443 ENSGT00940000155857.e.a ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Pinecone sodierfish MODERN SPECIES ENSMMDG00005002635 slc34a2a (ENSMMDG00005002751) ENSMMDG00005003713 ENSMMDG00005003720 chic2 (ENSMMDG00005003725) fip1l1b (ENSMMDG00005003737) kitb (ENSMMDG00005003764) clockb (ENSMMDG00005004044) exoc1l (ENSMMDG00005006062) smc2 (ENSMMDG00005006069) ecpas (ENSMMDG00005006181) kdm4c (ENSMMDG00005008177) ENSMMDG00005008242 TYRP1 (ENSMMDG00005008254) ENSMMDG00005008262 ADGRL3 (ENSMMDG00005008289) #22 ENSMMDG00005008314 gtf2e2 (ENSMMDG00005008318) smim18 (ENSMMDG00005008323) ENSMMDG00005008328 ENSMMDG00005008335 rbpja (ENSMMDG00005008348) STIM2 (ENSMMDG00005008421) ENSMMDG00005008425 ENSMMDG00005008437 ENSMMDG00005008446 ENSMMDG00005008476 ENSMMDG00005008483 ENSMMDG00005008494 ITLN1 (ENSMMDG00005008500) crmp1 (ENSMMDG00005008507) Percomorphaceae ANCESTRAL SPECIES 17 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Tiger tail seahorse MODERN SPECIES 518 ENSHCOG00000015872 ENSHCOG00000015868 chic2 (ENSHCOG00000015857) fip1l1b (ENSHCOG00000015834) ENSHCOG00000015822 ENSHCOG00000015818 clockb (ENSHCOG00000015784) exoc1l (ENSHCOG00000015416) smc2 (ENSHCOG00000015385) ENSHCOG00000015311 ecpas (ENSHCOG00000015292) kdm4c (ENSHCOG00000015229) ENSHCOG00000015136 TYRP1 (ENSHCOG00000015079) ENSHCOG00000015042 ADGRL3 (ENSHCOG00000014889) #22 ENSHCOG00000014214 gtf2e2 (ENSHCOG00000014209) DCTN6 (ENSHCOG00000014195) ENSHCOG00000014189 STIM2 (ENSHCOG00000014160) ENSHCOG00000013791 ENSHCOG00000013764 crmp1 (ENSHCOG00000013745) WFS1 (ENSHCOG00000013705) ppp2r2ca (ENSHCOG00000013679) hpf1 (ENSHCOG00000013653) ENSHCOG00000013648 ANK2 (ENSHCOG00000013635) Percomorphaceae_B ANCESTRAL SPECIES ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g Ovalentaria ANCESTRAL SPECIES ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a Ovalentaria_B ANCESTRAL SPECIES 4 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT01030000236196 ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Pomacentridae ANCESTRAL SPECIES 8 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000177601 ENSGT00940000155279.C.a.b.f Pomacentridae_A ANCESTRAL SPECIES ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Amphiprion ANCESTRAL SPECIES ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000177878 ENSGT00940000155527.j.b #22 ENSGT00940000159842.pc.a.a.b.b.b.a ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f Orange clownfish MODERN SPECIES 17 slc34a2a (ENSAPEG00000022303) ENSAPEG00000022298 ENSAPEG00000022275 chic2 (ENSAPEG00000022251) fip1l1b (ENSAPEG00000022229) kitb (ENSAPEG00000022173) clockb (ENSAPEG00000022094) exoc1l (ENSAPEG00000022070) smc2 (ENSAPEG00000021997) ecpas (ENSAPEG00000021886) kdm4c (ENSAPEG00000021825) ENSAPEG00000021741 TYRP1 (ENSAPEG00000021687) ENSAPEG00000021642 ENSAPEG00000021616 ADGRL3 (ENSAPEG00000021421) #22 ENSAPEG00000021388 smim18 (ENSAPEG00000021366) gtf2e2 (ENSAPEG00000021340) DCTN6 (ENSAPEG00000021316) HGSNAT (ENSAPEG00000021302) rbpja (ENSAPEG00000021264) ENSAPEG00000021067 ENSAPEG00000021025 ENSAPEG00000020969 crmp1 (ENSAPEG00000020908) WFS1 (ENSAPEG00000020866) ppp2r2ca (ENSAPEG00000020822) ENSAPEG00000020790 hpf1 (ENSAPEG00000020760) ENSAPEG00000020724 Clown anemonefish MODERN SPECIES 1451 ENSAOCG00000003549 TYRP1 (ENSAOCG00000003527) ENSAOCG00000003491 ADGRL3 (ENSAOCG00000003408) #22 mibp2 (ENSAOCG00000003342) gtf2e2 (ENSAOCG00000000085) smim18 (ENSAOCG00000003332) DCTN6 (ENSAOCG00000003326) HGSNAT (ENSAOCG00000003320) rbpja (ENSAOCG00000003307) ENSAOCG00000003287 Spiny chromis MODERN SPECIES 363 ENSAPOG00000002897 TYRP1 (ENSAPOG00000002999) ENSAPOG00000003157 ENSAPOG00000003232 ADGRL3 (ENSAPOG00000003416) #22 smim18 (ENSAPOG00000003456) gtf2e2 (ENSAPOG00000003480) DCTN6 (ENSAPOG00000003515) HGSNAT (ENSAPOG00000003539) rbpja (ENSAPOG00000003569) STIM2 (ENSAPOG00000003635) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 299 ENSSPAG00000017506 ENSSPAG00000017519 chic2 (ENSSPAG00000017538) fip1l1b (ENSSPAG00000017564) kitb (ENSSPAG00000017583) clockb (ENSSPAG00000017640) exoc1l (ENSSPAG00000017743) smc2 (ENSSPAG00000017757) ENSSPAG00000017806 ecpas (ENSSPAG00000017833) ENSSPAG00000017961 ENSSPAG00000017995 ENSSPAG00000018086 TYRP1 (ENSSPAG00000018509) ENSSPAG00000018541 ADGRL3 (ENSSPAG00000018591) #22 gtf2e2 (ENSSPAG00000018750) smim18 (ENSSPAG00000018779) DCTN6 (ENSSPAG00000018797) ENSSPAG00000018839 rbpja (ENSSPAG00000018868) STIM2 (ENSSPAG00000018902) ENSSPAG00000018914 ENSSPAG00000018928 crmp1 (ENSSPAG00000018953) WFS1 (ENSSPAG00000018975) ppp2r2ca (ENSSPAG00000018993) ENSSPAG00000019008 ENSSPAG00000019019 hpf1 (ENSSPAG00000019040) ENSSPAG00000019071 Bicolor damselfish MODERN SPECIES 838 TYRP1 (ENSSPAG00000004062) LURAP1L (ENSSPAG00000004054) ENSSPAG00000003940 ENSSPAG00000003912 #22 Cichlidae ANCESTRAL SPECIES 3 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Midas cichlid MODERN SPECIES 274 ADGRL3 (ENSACIG00000014545) #22 ENSACIG00000014529 smim18 (ENSACIG00000014520) gtf2e2 (ENSACIG00000014507) DCTN6 (ENSACIG00000014499) ENSACIG00000014471 rbpja (ENSACIG00000014433) STIM2 (ENSACIG00000014212) ENSACIG00000014185 ENSACIG00000014168 ENSACIG00000014159 ENSACIG00000014151 ENSACIG00000014138 ENSACIG00000014131 ENSACIG00000014115 crmp1 (ENSACIG00000012963) Pseudocrenilabrinae ANCESTRAL SPECIES 3 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Nile tilapia MODERN SPECIES 18 ENSONIG00000030677 slc34a2a (ENSONIG00000041326) ociad1 (ENSONIG00000017989) ENSONIG00000031405 chic2 (ENSONIG00000041516) fip1l1b (ENSONIG00000008785) kitb (ENSONIG00000008788) clockb (ENSONIG00000008797) exoc1l (ENSONIG00000008809) smc2 (ENSONIG00000008811) ecpas (ENSONIG00000008818) kdm4c (ENSONIG00000008824) ENSONIG00000008832 TYRP1 (ENSONIG00000008846) ENSONIG00000029433 ADGRL3 (ENSONIG00000008860) #22 smim18 (ENSONIG00000043015) gtf2e2 (ENSONIG00000008865) DCTN6 (ENSONIG00000008868) HGSNAT (ENSONIG00000008872) rbpja (ENSONIG00000043047) STIM2 (ENSONIG00000008875) ENSONIG00000042062 ENSONIG00000037076 ENSONIG00000008880 crmp1 (ENSONIG00000008887) WFS1 (ENSONIG00000008897) ppp2r2ca (ENSONIG00000008902) ENSONIG00000008905 hpf1 (ENSONIG00000008911) ENSONIG00000008914 Pseudocrenilabrinae_A ANCESTRAL SPECIES 5 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000179958 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Lyretail cichlid DUPLICATION Lyretail cichlid MODERN SPECIES 301 slc34a2a (ENSNBRG00000017895) ENSNBRG00000017877 ENSNBRG00000017873 chic2 (ENSNBRG00000017853) fip1l1b (ENSNBRG00000017832) ENSNBRG00000017814 ENSNBRG00000017792 CLOCK (ENSNBRG00000017733) exoc1l (ENSNBRG00000017710) smc2 (ENSNBRG00000017664) ecpas (ENSNBRG00000017570) kdm4c (ENSNBRG00000017522) ENSNBRG00000017456 TYRP1 (ENSNBRG00000017425) ENSNBRG00000017338 ADGRL3 (ENSNBRG00000017271) #22 smim18 (ENSNBRG00000017249) gtf2e2 (ENSNBRG00000017242) DCTN6 (ENSNBRG00000017226) HGSNAT (ENSNBRG00000017214) rbpja (ENSNBRG00000017183) STIM2 (ENSNBRG00000017167) ENSNBRG00000017148 crmp1 (ENSNBRG00000017119) WFS1 (ENSNBRG00000017107) ppp2r2ca (ENSNBRG00000017086) ENSNBRG00000017070 hpf1 (ENSNBRG00000017051) ENSNBRG00000017029 ENSNBRG00000017003 ENSNBRG00000016961 Lyretail cichlid MODERN SPECIES 406 ENSNBRG00000023355 ccdc149a (ENSNBRG00000023359) ENSNBRG00000023387 PPARGC1A (ENSNBRG00000023403) gba3 (ENSNBRG00000023414) ADGRA3 (ENSNBRG00000023430) KCNIP4 (ENSNBRG00000023439) sec24d (ENSNBRG00000023448) ENSNBRG00000023471 myoz2a (ENSNBRG00000023482) ENSNBRG00000023490 PTPRD (ENSNBRG00000023501) TYRP1 (ENSNBRG00000023511) LURAP1L (ENSNBRG00000023518) MPDZ (ENSNBRG00000023524) ENSNBRG00000023536 #22 ENSNBRG00000023541 Haplochromini ANCESTRAL SPECIES 3 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 Burton s mouthbrooder MODERN SPECIES 593 fip1l1b (ENSHBUG00000013978) kitb (ENSHBUG00000014002) clockb (ENSHBUG00000014187) exoc1l (ENSHBUG00000014198) smc2 (ENSHBUG00000014284) ecpas (ENSHBUG00000014406) ENSHBUG00000014453 ENSHBUG00000014479 ENSHBUG00000000425 TYRP1 (ENSHBUG00000014613) ENSHBUG00000014642 ADGRL3 (ENSHBUG00000014840) #22 smim18 (ENSHBUG00000014870) gtf2e2 (ENSHBUG00000014885) DCTN6 (ENSHBUG00000014920) HGSNAT (ENSHBUG00000014941) rbpja (ENSHBUG00000015000) ENSHBUG00000015027 Haplochromini_A ANCESTRAL SPECIES 2 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00980000198676 P. nyererei MODERN SPECIES 482 slc34a2a (ENSPNYG00000016059) ENSPNYG00000016051 ENSPNYG00000016022 chic2 (ENSPNYG00000016011) ENSPNYG00000015994 fip1l1b (ENSPNYG00000015976) kitb (ENSPNYG00000015929) clockb (ENSPNYG00000015652) exoc1l (ENSPNYG00000015577) smc2 (ENSPNYG00000015529) ecpas (ENSPNYG00000015414) kdm4c (ENSPNYG00000015367) ENSPNYG00000015301 TYRP1 (ENSPNYG00000015263) ENSPNYG00000015247 ADGRL3 (ENSPNYG00000015202) #22 ENSPNYG00000015185 smim18 (ENSPNYG00000015178) gtf2e2 (ENSPNYG00000015163) DCTN6 (ENSPNYG00000015135) HGSNAT (ENSPNYG00000015105) rbpja (ENSPNYG00000015075) STIM2 (ENSPNYG00000015047) ENSPNYG00000015030 ENSPNYG00000015013 Haplochromini_B ANCESTRAL SPECIES 8 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000181745 ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.a.c ENSGT01100000263949.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f Eastern happy MODERN SPECIES 18 ENSACLG00000009861 ENSACLG00000010405 ENSACLG00000010406 fip1l1b (ENSACLG00000010418) kitb (ENSACLG00000010468) clockb (ENSACLG00000010583) exoc1l (ENSACLG00000010957) smc2 (ENSACLG00000010966) ecpas (ENSACLG00000011055) ENSACLG00000011182 ENSACLG00000011213 ENSACLG00000011227 ENSACLG00000011719 TYRP1 (ENSACLG00000011752) ENSACLG00000011772 ADGRL3 (ENSACLG00000011861) #22 gtf2e2 (ENSACLG00000011939) smim18 (ENSACLG00000011954) DCTN6 (ENSACLG00000011976) HGSNAT (ENSACLG00000012041) rbpja (ENSACLG00000012078) STIM2 (ENSACLG00000012115) ENSACLG00000012155 ENSACLG00000012186 ENSACLG00000012221 crmp1 (ENSACLG00000012241) WFS1 (ENSACLG00000012306) ppp2r2ca (ENSACLG00000012319) ENSACLG00000012374 hpf1 (ENSACLG00000012405) ENSACLG00000012468 Zebra mbuna MODERN SPECIES 1109 ENSMZEG00005023831 chic2 (ENSMZEG00005023830) ENSMZEG00005023829 fip1l1b (ENSMZEG00005023828) kitb (ENSMZEG00005023827) clockb (ENSMZEG00005023826) exoc1l (ENSMZEG00005023825) smc2 (ENSMZEG00005023824) ecpas (ENSMZEG00005023823) ENSMZEG00005023822 ENSMZEG00005023821 ENSMZEG00005023820 ENSMZEG00005023819 TYRP1 (ENSMZEG00005023818) ENSMZEG00005023817 ADGRL3 (ENSMZEG00005023776) #22 smim18 (ENSMZEG00005023754) gtf2e2 (ENSMZEG00005023750) DCTN6 (ENSMZEG00005023748) HGSNAT (ENSMZEG00005023744) rbpja (ENSMZEG00005023737) STIM2 (ENSMZEG00005023732) ENSMZEG00005023729 ENSMZEG00005023726 ENSMZEG00005023725 WDR19 (ENSMZEG00005023719) rfc1 (ENSMZEG00005023710) rpl9 (ENSMZEG00005023706) lias (ENSMZEG00005023703) ugdh (ENSMZEG00005023700) map9 (ENSMZEG00005023698) Atherinomorphae ANCESTRAL SPECIES 20 ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a Cyprinodontiformes ANCESTRAL SPECIES 18 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000155279.C.a.b.e.a Cyprinodontoidei ANCESTRAL SPECIES 15 ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f Poeciliinae ANCESTRAL SPECIES 9 ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000177384 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Poecilia ANCESTRAL SPECIES 6 ENSGT00530000063707.a ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 NAME_6 ANCESTRAL SPECIES 47 ENSGT00530000063707.a ENSGT00940000158004 ENSGT01030000234820 ENSGT00390000012364.b ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b.i ENSGT00400000023727.b.j ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Amazon molly MODERN SPECIES 295 atf7ip (ENSPFOG00000014516) septin3 (ENSPFOG00000014541) suz12b (ENSPFOG00000014624) chic2 (ENSPFOG00000014707) ENSPFOG00000014723 fip1l1b (ENSPFOG00000014745) kitb (ENSPFOG00000014822) clockb (ENSPFOG00000015083) exoc1l (ENSPFOG00000015164) smc2 (ENSPFOG00000015169) ecpas (ENSPFOG00000015283) ENSPFOG00000015484 ENSPFOG00000015661 TYRP1 (ENSPFOG00000016088) ENSPFOG00000016179 ADGRL3 (ENSPFOG00000016241) #22 gtf2e2 (ENSPFOG00000016382) smim18 (ENSPFOG00000020146) ENSPFOG00000016433 ENSPFOG00000016453 rbpja (ENSPFOG00000016494) STIM2 (ENSPFOG00000016556) ENSPFOG00000024524 ENSPFOG00000016592 ENSPFOG00000016595 crmp1 (ENSPFOG00000016623) WFS1 (ENSPFOG00000016702) ppp2r2ca (ENSPFOG00000016742) ENSPFOG00000016766 hpf1 (ENSPFOG00000016797) ANK2 (ENSPFOG00000016848) Sailfin molly MODERN SPECIES 533 ADGRL3 (ENSPLAG00000021073) #22 ENSPLAG00000021021 gtf2e2 (ENSPLAG00000021007) smim18 (ENSPLAG00000020984) ENSPLAG00000020962 ENSPLAG00000020920 rbpja (ENSPLAG00000020897) STIM2 (ENSPLAG00000020878) Guppy MODERN SPECIES 439 atf7ip (ENSPREG00000012796) septin3 (ENSPREG00000012774) ENSPREG00000012762 suz12b (ENSPREG00000012644) chic2 (ENSPREG00000012604) fip1l1b (ENSPREG00000012535) kitb (ENSPREG00000012489) CLOCK (ENSPREG00000011939) exoc1l (ENSPREG00000011864) smc2 (ENSPREG00000011769) ecpas (ENSPREG00000011321) ENSPREG00000011230 ENSPREG00000011036 TYRP1 (ENSPREG00000010917) ENSPREG00000010850 ADGRL3 (ENSPREG00000010586) #22 smim18 (ENSPREG00000010507) gtf2e2 (ENSPREG00000010486) DCTN6 (ENSPREG00000010472) ENSPREG00000010444 rbpja (ENSPREG00000010297) STIM2 (ENSPREG00000010192) ENSPREG00000010148 ENSPREG00000010138 ENSPREG00000010129 crmp1 (ENSPREG00000010103) WFS1 (ENSPREG00000010077) ppp2r2ca (ENSPREG00000010056) hpf1 (ENSPREG00000010038) ANK2 (ENSPREG00000009960) camk2d2 (ENSPREG00000009806) Platyfish MODERN SPECIES 19 septin3 (ENSXMAG00000017559) ENSXMAG00000029998 suz12b (ENSXMAG00000017579) chic2 (ENSXMAG00000020937) fip1l1b (ENSXMAG00000017620) kitb (ENSXMAG00000017634) clockb (ENSXMAG00000028575) exoc1l (ENSXMAG00000022359) smc2 (ENSXMAG00000004544) ENSXMAG00000027231 ENSXMAG00000026276 kdm4c (ENSXMAG00000023645) ENSXMAG00000011984 TYRP1 (ENSXMAG00000012045) ENSXMAG00000012077 ADGRL3 (ENSXMAG00000012102) #22 ENSXMAG00000021800 gtf2e2 (ENSXMAG00000012141) smim18 (ENSXMAG00000019693) ENSXMAG00000023015 ENSXMAG00000012177 rbpja (ENSXMAG00000012207) STIM2 (ENSXMAG00000012254) ENSXMAG00000026434 ENSXMAG00000012258 crmp1 (ENSXMAG00000012278) WFS1 (ENSXMAG00000012351) ppp2r2ca (ENSXMAG00000012375) ENSXMAG00000013671 hpf1 (ENSXMAG00000012400) ENSXMAG00000012408 NAME_4 ANCESTRAL SPECIES 469 ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 Mummichog MODERN SPECIES 425 TYRP1 (ENSFHEG00000000865) ENSFHEG00000006087 ADGRL3 (ENSFHEG00000006061) #22 ENSFHEG00000006009 Sheepshead minnow MODERN SPECIES 134 TYRP1 (ENSCVAG00000021453) ENSCVAG00000020781 ADGRL3 (ENSCVAG00000020732) #22 fibinb (ENSCVAG00000020552) bbox1 (ENSCVAG00000020540) MADD (ENSCVAG00000020510) nr1h3 (ENSCVAG00000019997) arl14ep (ENSCVAG00000019971) ENSCVAG00000019937 KCNA4 (ENSCVAG00000019614) cd151l (ENSCVAG00000019601) TMEM138 (ENSCVAG00000019572) ENSCVAG00000019551 ddb1 (ENSCVAG00000019531) tspan4a (ENSCVAG00000000867) taldo1 (ENSCVAG00000019420) ENSCVAG00000019386 CRABP1 (ENSCVAG00000019308) Aplocheiloidei ANCESTRAL SPECIES 32 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b ENSGT00940000160757 Turquoise killifish MODERN SPECIES 1617 ENSNFUG00015017770 CHIC2 (ENSNFUG00015017775) fip1l1b (ENSNFUG00015017783) kitb (ENSNFUG00015017809) CLOCK (ENSNFUG00015018138) exoc1l (ENSNFUG00015020090) smc2 (ENSNFUG00015020117) tmem175 (ENSNFUG00015020537) ENSNFUG00015020540 kdm4c (ENSNFUG00015020558) ENSNFUG00015021289 ENSNFUG00015023368 ENSNFUG00015023376 TYRP1 (ENSNFUG00015023384) ENSNFUG00015023395 ADGRL3 (ENSNFUG00015023415) #22 ENSNFUG00015023623 ENSNFUG00015023624 ENSNFUG00015023628 CRMP1 (ENSNFUG00015023700) WFS1 (ENSNFUG00015006757) ppp2r2ca (ENSNFUG00015006762) hpf1 (ENSNFUG00015006771) ENSNFUG00015006777 ENSNFUG00015006794 ENSNFUG00015007041 camk2d2 (ENSNFUG00015007058) ENSNFUG00015007149 ENSNFUG00015007153 ENSNFUG00015007172 ENSNFUG00015007233 Mangrove rivulus MODERN SPECIES 86 slc34a2a (ENSKMAG00000021916) ENSKMAG00000021926 ENSKMAG00000021929 chic2 (ENSKMAG00000021934) fip1l1b (ENSKMAG00000021938) kitb (ENSKMAG00000021945) clockb (ENSKMAG00000021952) exoc1l (ENSKMAG00000021957) smc2 (ENSKMAG00000021962) ecpas (ENSKMAG00000021979) ENSKMAG00000021994 ENSKMAG00000022021 TYRP1 (ENSKMAG00000000177) ENSKMAG00000000249 ENSKMAG00000000275 ADGRL3 (ENSKMAG00000000299) #22 gtf2e2 (ENSKMAG00000000332) smim18 (ENSKMAG00000000378) DCTN6 (ENSKMAG00000000386) HGSNAT (ENSKMAG00000000428) rbpja (ENSKMAG00000000445) ENSKMAG00000000490 ENSKMAG00000000501 ENSKMAG00000000514 ENSKMAG00000000524 crmp1 (ENSKMAG00000000535) ENSKMAG00000000620 WFS1 (ENSKMAG00000000636) ppp2r2ca (ENSKMAG00000000648) Oryzias ANCESTRAL SPECIES 15 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Oryzias_b ANCESTRAL SPECIES 29 ENSGT00930000151058 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Javanese ricefish MODERN SPECIES ENSOJAG00000018011 ENSOJAG00000018000 slc34a2a (ENSOJAG00000017277) ENSOJAG00000017176 ENSOJAG00000017140 chic2 (ENSOJAG00000017109) fip1l1b (ENSOJAG00000017102) kitb (ENSOJAG00000016645) clockb (ENSOJAG00000016253) exoc1l (ENSOJAG00000016206) smc2 (ENSOJAG00000015443) kdm4c (ENSOJAG00000013891) ENSOJAG00000008199 TYRP1 (ENSOJAG00000007953) ENSOJAG00000007820 ADGRL3 (ENSOJAG00000004774) #22 smim18 (ENSOJAG00000004223) gtf2e2 (ENSOJAG00000004072) DCTN6 (ENSOJAG00000003897) HGSNAT (ENSOJAG00000003456) rbpja (ENSOJAG00000003267) STIM2 (ENSOJAG00000003027) ENSOJAG00000002956 ENSOJAG00000002948 crmp1 (ENSOJAG00000002315) WFS1 (ENSOJAG00000002110) ppp2r2ca (ENSOJAG00000002089) ENSOJAG00000002069 hpf1 (ENSOJAG00000002044) ENSOJAG00000001074 camk2d2 (ENSOJAG00000000420) Indian medaka MODERN SPECIES 21 slc34a2a (ENSOMEG00000015839) ENSOMEG00000015811 ENSOMEG00000015790 chic2 (ENSOMEG00000015778) fip1l1b (ENSOMEG00000015730) kitb (ENSOMEG00000015661) clockb (ENSOMEG00000015412) exoc1l (ENSOMEG00000000377) smc2 (ENSOMEG00000014982) ecpas (ENSOMEG00000014908) ENSOMEG00000001027 ENSOMEG00000014791 ENSOMEG00000014764 TYRP1 (ENSOMEG00000014715) ENSOMEG00000014698 ADGRL3 (ENSOMEG00000014640) #22 gtf2e2 (ENSOMEG00000014610) smim18 (ENSOMEG00000014593) DCTN6 (ENSOMEG00000014586) ENSOMEG00000014565 rbpja (ENSOMEG00000014525) ENSOMEG00000014488 ENSOMEG00000014461 crmp1 (ENSOMEG00000014427) WFS1 (ENSOMEG00000014371) ppp2r2ca (ENSOMEG00000014344) ENSOMEG00000014313 hpf1 (ENSOMEG00000014263) ENSOMEG00000014166 ENSOMEG00000014138 ENSOMEG00000014101 Oryzias_a ANCESTRAL SPECIES 23 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000155626 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b.f ENSGT00940000159769.a.b Chinese medaka MODERN SPECIES 272 ENSOSIG00000021647 ENSOSIG00000021643 slc34a2a (ENSOSIG00000021485) ENSOSIG00000021466 ENSOSIG00000021465 chic2 (ENSOSIG00000021464) fip1l1b (ENSOSIG00000021461) kitb (ENSOSIG00000021456) clockb (ENSOSIG00000021261) exoc1l (ENSOSIG00000021194) smc2 (ENSOSIG00000021184) ENSOSIG00000021167 ENSOSIG00000001740 TYRP1 (ENSOSIG00000000687) ENSOSIG00000000668 ENSOSIG00000000656 #22 smim18 (ENSOSIG00000000650) gtf2e2 (ENSOSIG00000000648) DCTN6 (ENSOSIG00000000644) ENSOSIG00000000637 rbpja (ENSOSIG00000000585) STIM2 (ENSOSIG00000000579) Japanese Medaka HdrR MODERN SPECIES slc34a2a (ENSORLG00000004331) ENSORLG00000027533 ENSORLG00000004352 ENSORLG00000025729 chic2 (ENSORLG00000004366) fip1l1b (ENSORLG00000004397) kitb (ENSORLG00000004401) clockb (ENSORLG00000004495) exoc1l (ENSORLG00000027626) smc2 (ENSORLG00000004556) ecpas (ENSORLG00000004593) kdm4c (ENSORLG00000004619) ENSORLG00000004685 ENSORLG00000004723 ENSORLG00000004753 ENSORLG00000004792 #22 ENSORLG00000004806 gtf2e2 (ENSORLG00000004825) smim18 (ENSORLG00000023687) DCTN6 (ENSORLG00000004837) ENSORLG00000004882 ENSORLG00000004897 ENSORLG00000029705 ENSORLG00000028789 ENSORLG00000026446 ENSORLG00000023677 ENSORLG00000004916 crmp1 (ENSORLG00000027778) WFS1 (ENSORLG00000004929) ppp2r2ca (ENSORLG00000004957) ENSORLG00000029779 Percomorphaceae_C ANCESTRAL SPECIES 3 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g Eupercaria ANCESTRAL SPECIES 2 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Tetraodontidae ANCESTRAL SPECIES 267 ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00390000017890.b.a Fugu DUPLICATION Fugu MODERN SPECIES 8 ADRA1D (ENSTRUG00000002804) ENSTRUG00000031420 ctnna2 (ENSTRUG00000002863) ENSTRUG00000020187 LRRTM1 (ENSTRUG00000004494) ENSTRUG00000033430 ENSTRUG00000032775 ENSTRUG00000023192 ENSTRUG00000031293 ENSTRUG00000032245 ENSTRUG00000027425 ENSTRUG00000027160 suclg1 (ENSTRUG00000000638) patl1 (ENSTRUG00000000709) ENSTRUG00000030942 ENSTRUG00000028691 #22 gtf2e2 (ENSTRUG00000028017) ENSTRUG00000004797 ENSTRUG00000033337 jupa (ENSTRUG00000000583) ENSTRUG00000003718 ENSTRUG00000031532 STIM2 (ENSTRUG00000000799) gtf2e2 (ENSTRUG00000004948) ENSTRUG00000026927 ENSTRUG00000030929 #22 SLC29A1 (ENSTRUG00000028910) ENSTRUG00000022752 ENSTRUG00000028655 SOS1 (ENSTRUG00000013953) rcor3 (ENSTRUG00000013835) Fugu MODERN SPECIES 8 AARS2 (ENSTRUG00000013248) ENSTRUG00000013378 opn6a (ENSTRUG00000013409) slc8a1a (ENSTRUG00000013535) MAL (ENSTRUG00000013673) pgap4 (ENSTRUG00000013719) tpcn3 (ENSTRUG00000013729) ENSTRUG00000013764 ENSTRUG00000032383 ENSTRUG00000013794 rcor3 (ENSTRUG00000013835) SOS1 (ENSTRUG00000013953) ENSTRUG00000028655 ENSTRUG00000022752 SLC29A1 (ENSTRUG00000028910) ENSTRUG00000030929 #22 ENSTRUG00000026927 gtf2e2 (ENSTRUG00000004948) STIM2 (ENSTRUG00000000799) ENSTRUG00000031532 ENSTRUG00000003718 jupa (ENSTRUG00000000583) ENSTRUG00000033337 ENSTRUG00000004797 gtf2e2 (ENSTRUG00000028017) ENSTRUG00000028691 #22 ENSTRUG00000030942 patl1 (ENSTRUG00000000709) suclg1 (ENSTRUG00000000638) ENSTRUG00000027160 ENSTRUG00000027425 Tetraodon MODERN SPECIES 10 slc25a10b (ENSTNIG00000005688) slc25a10b (ENSTNIG00000004108) ENSTNIG00000004107 chic2 (ENSTNIG00000004106) ENSTNIG00000004105 fip1l1b (ENSTNIG00000004104) kitb (ENSTNIG00000004103) clockb (ENSTNIG00000004102) smc2 (ENSTNIG00000004101) ecpas (ENSTNIG00000004100) kdm4c (ENSTNIG00000004099) ENSTNIG00000004098 ENSTNIG00000001593 ENSTNIG00000004617 asah2 (ENSTNIG00000004618) ADGRL3 (ENSTNIG00000005139) #22 gtf2e2 (ENSTNIG00000005140) DCTN6 (ENSTNIG00000005141) ENSTNIG00000019603 ENSTNIG00000018675 ENSTNIG00000000969 vps8 (ENSTNIG00000005465) FAM98A (ENSTNIG00000005464) ENSTNIG00000005463 ENSTNIG00000005961 cyp17a1 (ENSTNIG00000019678) ENSTNIG00000004434 RNF166 (ENSTNIG00000004433) wbp1la (ENSTNIG00000005241) fbxw4 (ENSTNIG00000005242) fgf8a (ENSTNIG00000006362) Eupecaria_A ANCESTRAL SPECIES 3 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Ballan wrasse MODERN SPECIES 240 ENSLBEG00000028822 ENSLBEG00000028820 fip1l1b (ENSLBEG00000028819) kitb (ENSLBEG00000028818) ENSLBEG00000028813 exoc1l (ENSLBEG00000028809) smc2 (ENSLBEG00000028807) ecpas (ENSLBEG00000028805) kdm4c (ENSLBEG00000028803) ENSLBEG00000028801 TYRP1 (ENSLBEG00000028800) ENSLBEG00000028798 ENSLBEG00000028797 ENSLBEG00000028794 #22 smim18 (ENSLBEG00000028792) gtf2e2 (ENSLBEG00000028790) DCTN6 (ENSLBEG00000028789) ENSLBEG00000028788 rbpja (ENSLBEG00000028786) STIM2 (ENSLBEG00000028785) ENSLBEG00000028784 Eupecaria_B ANCESTRAL SPECIES 1 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Perciformes ANCESTRAL SPECIES 2 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT01060000248860 ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Perciformes_a ANCESTRAL SPECIES ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Channel bull blenny MODERN SPECIES slc34a2a (ENSCGOG00000019249) ENSCGOG00000019247 ENSCGOG00000019243 chic2 (ENSCGOG00000019241) fip1l1b (ENSCGOG00000019240) kitb (ENSCGOG00000017978) clockb (ENSCGOG00000017276) exoc1l (ENSCGOG00000017250) ENSCGOG00000017249 smc2 (ENSCGOG00000016701) ecpas (ENSCGOG00000016277) ENSCGOG00000016252 ENSCGOG00000003397 TYRP1 (ENSCGOG00000003047) ENSCGOG00000003030 ADGRL3 (ENSCGOG00000001017) #22 smim18 (ENSCGOG00000000954) gtf2e2 (ENSCGOG00000000950) DCTN6 (ENSCGOG00000000927) ENSCGOG00000000921 rbpja (ENSCGOG00000000823) STIM2 (ENSCGOG00000000558) ENSCGOG00000000437 crmp1 (ENSCGOG00000000289) WFS1 (ENSCGOG00000000176) ppp2r2ca (ENSCGOG00000000122) ENSCGOG00000000076 hpf1 (ENSCGOG00000023505) ENSCGOG00000021379 camk2d2 (ENSCGOG00000016254) ENSCGOG00000016095 Pike perch MODERN SPECIES 69 slc34a2a (ENSSLUG00000014608) ENSSLUG00000014587 ENSSLUG00000014581 chic2 (ENSSLUG00000014570) ENSSLUG00000014549 kitb (ENSSLUG00000014388) clockb (ENSSLUG00000011054) exoc1l (ENSSLUG00000010916) smc2 (ENSSLUG00000010884) ecpas (ENSSLUG00000008642) kdm4c (ENSSLUG00000008356) ENSSLUG00000025842 TYRP1 (ENSSLUG00000025429) hnrnpd (ENSSLUG00000025425) ENSSLUG00000025422 ENSSLUG00000025416 #22 ENSSLUG00000025413 ENSSLUG00000025412 smim18 (ENSSLUG00000025410) gtf2e2 (ENSSLUG00000025406) DCTN6 (ENSSLUG00000025399) HGSNAT (ENSSLUG00000025391) rbpja (ENSSLUG00000025378) STIM2 (ENSSLUG00000025345) ENSSLUG00000025328 crmp1 (ENSSLUG00000025211) WFS1 (ENSSLUG00000025185) ppp2r2ca (ENSSLUG00000025184) ENSSLUG00000025180 hpf1 (ENSSLUG00000025177) ENSSLUG00000025165 Cottioidei ANCESTRAL SPECIES 3 ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT01060000248860 ENSGT00940000166223.a ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00990000203806 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Lumpfish MODERN SPECIES ENSCLMG00005002621 slc34a2a (ENSCLMG00005002620) ENSCLMG00005002618 ENSCLMG00005002617 chic2 (ENSCLMG00005002615) ENSCLMG00005002613 ENSCLMG00005002611 clockb (ENSCLMG00005002021) exoc1l (ENSCLMG00005002002) smc2 (ENSCLMG00005001997) ecpas (ENSCLMG00005001275) kdm4c (ENSCLMG00005001264) ENSCLMG00005000943 TYRP1 (ENSCLMG00005000925) ENSCLMG00005000921 ADGRL3 (ENSCLMG00005000920) #22 smim18 (ENSCLMG00005000919) gtf2e2 (ENSCLMG00005000918) DCTN6 (ENSCLMG00005000917) HGSNAT (ENSCLMG00005000902) rbpja (ENSCLMG00005000865) ENSCLMG00005000859 ENSCLMG00005000858 crmp1 (ENSCLMG00005000855) WFS1 (ENSCLMG00005000842) ppp2r2ca (ENSCLMG00005000837) hpf1 (ENSCLMG00005000835) ENSCLMG00005000823 ENSCLMG00005000820 camk2d2 (ENSCLMG00005000488) ENSCLMG00005000452 Stickleback MODERN SPECIES 4 ENSGACG00000015962 ENSGACG00000015960 slc34a2a (ENSGACG00000015959) ENSGACG00000015951 chic2 (ENSGACG00000015950) ENSGACG00000015947 fip1l1b (ENSGACG00000015946) kitb (ENSGACG00000015944) clockb (ENSGACG00000015939) smc2 (ENSGACG00000015927) ecpas (ENSGACG00000015925) kdm4c (ENSGACG00000015922) ENSGACG00000015921 TYRP1 (ENSGACG00000015912) ENSGACG00000015905 ENSGACG00000015904 #22 ENSGACG00000015901 smim18 (ENSGACG00000015899) gtf2e2 (ENSGACG00000015893) DCTN6 (ENSGACG00000015891) HGSNAT (ENSGACG00000015890) rbpja (ENSGACG00000015888) Eupecaria_C ANCESTRAL SPECIES 14 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Gilthead seabream MODERN SPECIES slc34a2a (ENSSAUG00010025097) ENSSAUG00010025088 ENSSAUG00010025087 chic2 (ENSSAUG00010025084) fip1l1b (ENSSAUG00010025079) kitb (ENSSAUG00010025076) clockb (ENSSAUG00010025019) ENSSAUG00010025005 exoc1l (ENSSAUG00010025004) smc2 (ENSSAUG00010024993) ecpas (ENSSAUG00010024842) kdm4c (ENSSAUG00010024690) ENSSAUG00010023740 TYRP1 (ENSSAUG00010023675) ENSSAUG00010023668 ADGRL3 (ENSSAUG00010021014) #22 smim18 (ENSSAUG00010020991) gtf2e2 (ENSSAUG00010020988) DCTN6 (ENSSAUG00010020983) ENSSAUG00010020981 rbpja (ENSSAUG00010020951) STIM2 (ENSSAUG00010020885) ENSSAUG00010020883 ENSSAUG00010020881 ENSSAUG00010020880 ENSSAUG00010020879 crmp1 (ENSSAUG00010020754) WFS1 (ENSSAUG00010020749) ppp2r2ca (ENSSAUG00010020748) ENSSAUG00010020746 hpf1 (ENSSAUG00010020745) Eupercaria_incertae_sedis ANCESTRAL SPECIES 13 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b European seabass MODERN SPECIES 20 ENSDLAG00005012194 ENSDLAG00005012199 ENSDLAG00005035094 ENSDLAG00005012323 ENSDLAG00005012338 ENSDLAG00005012563 ENSDLAG00005012617 ENSDLAG00005013892 exoc1l (ENSDLAG00005014437) smc2 (ENSDLAG00005014443) ENSDLAG00005014517 ENSDLAG00005015624 ENSDLAG00005015926 ENSDLAG00005022973 ENSDLAG00005022999 ENSDLAG00005023107 #22 ENSDLAG00005024835 SMIM18 (ENSDLAG00005024842) ENSDLAG00005030887 ENSDLAG00005024854 rbpja (ENSDLAG00005024887) ENSDLAG00005024913 ENSDLAG00005024916 crmp1 (ENSDLAG00005024927) WFS1 (ENSDLAG00005029500) ppp2r2ca (ENSDLAG00005031161) ENSDLAG00005025024 hpf1 (ENSDLAG00005025041) ENSDLAG00005025100 camk2d2 (ENSDLAG00005032299) ENSDLAG00005014206 Large yellow croaker MODERN SPECIES 481 ENSLCRG00005010643 slc34a2a (ENSLCRG00005010665) ENSLCRG00005012486 ENSLCRG00005012487 ENSLCRG00005012491 chic2 (ENSLCRG00005012496) kitb (ENSLCRG00005012510) clockb (ENSLCRG00005012516) exoc1l (ENSLCRG00005012561) smc2 (ENSLCRG00005012562) ecpas (ENSLCRG00005012572) kdm4c (ENSLCRG00005012860) ENSLCRG00005012949 TYRP1 (ENSLCRG00005014121) ENSLCRG00005014151 ADGRL3 (ENSLCRG00005014203) #22 gtf2e2 (ENSLCRG00005017199) smim18 (ENSLCRG00005017201) ENSLCRG00005017204 ENSLCRG00005017247 rbpja (ENSLCRG00005017286) STIM2 (ENSLCRG00005017288) ENSLCRG00005017291 ENSLCRG00005017292 crmp1 (ENSLCRG00005017311) WFS1 (ENSLCRG00005020444) ppp2r2ca (ENSLCRG00005020446) ENSLCRG00005020451 hpf1 (ENSLCRG00005020456) ENSLCRG00005020483 camk2d2 (ENSLCRG00005022490) Percomorphaceae_D ANCESTRAL SPECIES ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 Anabantaria ANCESTRAL SPECIES 1 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.b ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b Anabantoidei ANCESTRAL SPECIES ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Climbing perch MODERN SPECIES ENSATEG00000021927 ENSATEG00000021816 ENSATEG00000029554 ENSATEG00000021789 ENSATEG00000015358 ENSATEG00000021757 ENSATEG00000021737 ENSATEG00000021687 exoc1l (ENSATEG00000021675) ENSATEG00000021647 ENSATEG00000021558 ENSATEG00000021528 ENSATEG00000021335 ENSATEG00000021292 ENSATEG00000029001 ENSATEG00000021184 #22 SMIM18 (ENSATEG00000021153) GTF2E2 (ENSATEG00000021140) DCTN6 (ENSATEG00000021125) ENSATEG00000021103 rbpja (ENSATEG00000021086) ENSATEG00000020936 ENSATEG00000020897 crmp1 (ENSATEG00000020872) WFS1 (ENSATEG00000020851) ppp2r2ca (ENSATEG00000020822) hpf1 (ENSATEG00000020795) ENSATEG00000020709 camk2d2 (ENSATEG00000020671) ENSATEG00000020661 CXCL8 (ENSATEG00000028656) Siamese fighting fish MODERN SPECIES slc34a2a (ENSBSLG00000011907) ENSBSLG00000012241 ENSBSLG00000012256 ENSBSLG00000012267 chic2 (ENSBSLG00000012275) fip1l1b (ENSBSLG00000012315) kitb (ENSBSLG00000012404) clockb (ENSBSLG00000012519) exoc1l (ENSBSLG00000012657) smc2 (ENSBSLG00000012664) ecpas (ENSBSLG00000012695) kdm4c (ENSBSLG00000012714) ENSBSLG00000012935 TYRP1 (ENSBSLG00000020744) ENSBSLG00000020767 ENSBSLG00000020834 #22 gtf2e2 (ENSBSLG00000022545) smim18 (ENSBSLG00000022561) DCTN6 (ENSBSLG00000022566) HGSNAT (ENSBSLG00000022618) rbpja (ENSBSLG00000022652) ENSBSLG00000022659 ENSBSLG00000022796 crmp1 (ENSBSLG00000022943) WFS1 (ENSBSLG00000023569) ppp2r2ca (ENSBSLG00000023578) ENSBSLG00000023594 hpf1 (ENSBSLG00000023652) ENSBSLG00000023696 camk2d2 (ENSBSLG00000024485) ENSBSLG00000024701 Zig-zag eel MODERN SPECIES ENSMAMG00000004468 ENSMAMG00000004490 ENSMAMG00000004513 ENSMAMG00000004535 ENSMAMG00000004554 ENSMAMG00000004644 exoc1l (ENSMAMG00000004786) smc2 (ENSMAMG00000004805) ENSMAMG00000004883 ENSMAMG00000005013 ENSMAMG00000005038 ENSMAMG00000005115 ENSMAMG00000005141 ENSMAMG00000005154 ENSMAMG00000005191 ENSMAMG00000005211 #22 ENSMAMG00000000644 ENSMAMG00000024593 Carangaria ANCESTRAL SPECIES ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Carangaria_A ANCESTRAL SPECIES 14 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00400000023727.a.b ENSGT00400000023727.a.a ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b Seriola ANCESTRAL SPECIES 29 ENSGT00930000151058 ENSGT00710000107036.a.b ENSGT00950000183177.a.b.b ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Greater amberjack MODERN SPECIES 102 ENSSDUG00000004198 ENSSDUG00000004186 chic2 (ENSSDUG00000004156) fip1l1b (ENSSDUG00000004117) kitb (ENSSDUG00000004094) clockb (ENSSDUG00000004057) exoc1l (ENSSDUG00000004042) smc2 (ENSSDUG00000003986) ecpas (ENSSDUG00000003877) ENSSDUG00000003831 ENSSDUG00000003819 ENSSDUG00000003802 ENSSDUG00000003734 TYRP1 (ENSSDUG00000003709) ENSSDUG00000003680 ADGRL3 (ENSSDUG00000003616) #22 ENSSDUG00000003605 smim18 (ENSSDUG00000003601) gtf2e2 (ENSSDUG00000003582) DCTN6 (ENSSDUG00000003551) ENSSDUG00000003524 rbpja (ENSSDUG00000003478) STIM2 (ENSSDUG00000003300) Yellowtail amberjack MODERN SPECIES 2982 ENSSLDG00000024057 ENSSLDG00000024066 chic2 (ENSSLDG00000024079) fip1l1b (ENSSLDG00000024099) kitb (ENSSLDG00000024132) ENSSLDG00000024209 exoc1l (ENSSLDG00000024231) smc2 (ENSSLDG00000024240) ecpas (ENSSLDG00000024289) kdm4c (ENSSLDG00000024407) ENSSLDG00000024480 ENSSLDG00000024512 ENSSLDG00000024546 TYRP1 (ENSSLDG00000024554) ENSSLDG00000024571 ADGRL3 (ENSSLDG00000024579) #22 ENSSLDG00000024602 gtf2e2 (ENSSLDG00000024609) smim18 (ENSSLDG00000024621) DCTN6 (ENSSLDG00000024624) ENSSLDG00000024640 rbpja (ENSSLDG00000024657) STIM2 (ENSSLDG00000024677) ENSSLDG00000024689 ENSSLDG00000024695 crmp1 (ENSSLDG00000024703) WFS1 (ENSSLDG00000024747) ppp2r2ca (ENSSLDG00000024757) ENSSLDG00000024772 ENSSLDG00000024778 hpf1 (ENSSLDG00000024781) Barramundi perch MODERN SPECIES 237 fip1l1b (ENSLCAG00010027597) kitb (ENSLCAG00010027617) clockb (ENSLCAG00010027638) exoc1l (ENSLCAG00010027647) smc2 (ENSLCAG00010027653) ecpas (ENSLCAG00010027680) kdm4c (ENSLCAG00010027698) ENSLCAG00010027801 TYRP1 (ENSLCAG00010028014) ENSLCAG00010028016 ADGRL3 (ENSLCAG00010028018) #22 gtf2e2 (ENSLCAG00010028020) smim18 (ENSLCAG00010028021) ENSLCAG00010028022 HGSNAT (ENSLCAG00010028023) rbpja (ENSLCAG00010028024) STIM2 (ENSLCAG00010028025) ENSLCAG00010028026 ENSLCAG00010028027 ENSLCAG00010028028 ENSLCAG00010028029 crmp1 (ENSLCAG00010028030) WFS1 (ENSLCAG00010028032) ppp2r2ca (ENSLCAG00010028033) ENSLCAG00010028034 hpf1 (ENSLCAG00010028035) Pleuronectoidei ANCESTRAL SPECIES 21 ENSGT00410000026290 ENSGT00950000183177.a.b.b ENSGT00990000204155 ENSGT00530000063690.a.a ENSGT00940000165977 ENSGT00390000003601.b ENSGT00940000162578 ENSGT00940000157580.a.b ENSGT00940000162193 ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00940000153617.C.f ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00410000029064 ENSGT00390000011749 ENSGT00390000017890.b.a ENSGT00390000001491.a ENSGT00390000005197.a.bb.a ENSGT00390000000214.a.b.l ENSGT00940000165832 ENSGT01030000234527.A.a.b.b.b ENSGT00390000016928.c ENSGT00950000182864.a.b.b.a.b.a.a.a.b ENSGT00940000155475.g ENSGT00390000014876 ENSGT00940000155279.C.a.b ENSGT00940000159769.a.b ENSGT00940000160757 Turbot MODERN SPECIES 20 ENSSMAG00000013628 ENSSMAG00000013593 ENSSMAG00000013587 ENSSMAG00000013580 ENSSMAG00000013553 ENSSMAG00000013444 ENSSMAG00000013415 ENSSMAG00000013284 exoc1l (ENSSMAG00000037823) ENSSMAG00000013228 ENSSMAG00000013083 ENSSMAG00000012984 ENSSMAG00000012743 ENSSMAG00000012712 ENSSMAG00000012539 ENSSMAG00000012386 #22 SMIM18 (ENSSMAG00000012371) GTF2E2 (ENSSMAG00000012351) DCTN6 (ENSSMAG00000012302) ENSSMAG00000012281 rbpja (ENSSMAG00000012195) ENSSMAG00000012189 ENSSMAG00000024259 ENSSMAG00000027615 crmp1 (ENSSMAG00000012069) WFS1 (ENSSMAG00000034750) ppp2r2ca (ENSSMAG00000012018) ENSSMAG00000012004 hpf1 (ENSSMAG00000011981) ENSSMAG00000027862 ENSSMAG00000011868 Tongue sole MODERN SPECIES 19 serhl (ENSCSEG00000006642) ENSCSEG00000006626 mb (ENSCSEG00000006616) ENSCSEG00000006609 zgc:158803 (ENSCSEG00000006601) fip1l1b (ENSCSEG00000006583) kitb (ENSCSEG00000006569) clockb (ENSCSEG00000006544) exoc1l (ENSCSEG00000006537) smc2 (ENSCSEG00000006524) ecpas (ENSCSEG00000006470) kdm4c (ENSCSEG00000006423) ENSCSEG00000006286 TYRP1 (ENSCSEG00000006262) ENSCSEG00000006192 ADGRL3 (ENSCSEG00000006125) #22 smim18 (ENSCSEG00000006118) gtf2e2 (ENSCSEG00000006111) DCTN6 (ENSCSEG00000006103) ENSCSEG00000006097 rbpja (ENSCSEG00000006030) STIM2 (ENSCSEG00000006014) ENSCSEG00000005997 crmp1 (ENSCSEG00000005981) WFS1 (ENSCSEG00000005973) ppp2r2ca (ENSCSEG00000005966) hpf1 (ENSCSEG00000005962) ANK2 (ENSCSEG00000005938) camk2d2 (ENSCSEG00000005184) ENSCSEG00000005131 FBXO10 (ENSCSEG00000005128) Osteoglossiformes ANCESTRAL SPECIES 280 ENSGT00950000182924.A.b.a.b.i ENSGT00950000183054.a.a.a.b ENSGT00950000183027.b.a ENSGT00940000156337.d ENSGT00800000124172.j ENSGT00940000156823.e.h.a ENSGT00550000074857 ENSGT00940000153612.A ENSGT00940000166168 ENSGT00530000063790.b.h ENSGT00940000155586.A ENSGT00940000155527.j.b #22 ENSGT00940000177878 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000010434.a ENSGT00940000159570.a ENSGT00950000183001.b.b.a.f ENSGT00940000156391.d ENSGT00940000165038.b Asian bonytongue MODERN SPECIES 7 ADGRA3 (ENSSFOG00015001554) KCNIP4 (ENSSFOG00015001513) sec24d (ENSSFOG00015001430) ENSSFOG00015028177 myoz2b (ENSSFOG00015001358) USP53 (ENSSFOG00015001304) fabp2 (ENSSFOG00015001291) ENSSFOG00015026817 elavl2 (ENSSFOG00015001257) smc2 (ENSSFOG00015001137) ecpas (ENSSFOG00015000926) kdm4c (ENSSFOG00015000814) PTPRD (ENSSFOG00015000700) ENSSFOG00015000683 ENSSFOG00015000612 ADGRL3 (ENSSFOG00015000461) #22 ENSSFOG00015026582 RBPMS (ENSSFOG00015029471) gtf2e2 (ENSSFOG00015000360) smim18 (ENSSFOG00015028589) HGSNAT (ENSSFOG00015000351) pi4k2b (ENSSFOG00015000304) htra3a (ENSSFOG00015029173) ENSSFOG00015000256 ENSSFOG00015000243 GPR78 (ENSSFOG00015000190) CPZ (ENSSFOG00015000173) ENSSFOG00015000153 hmx1 (ENSSFOG00015000124) adra2c (ENSSFOG00015020444) lrpap1 (ENSSFOG00015020423) P. kingsleyae MODERN SPECIES 25 ENSPKIG00000002115 ENSPKIG00000002093 ENSPKIG00000002077 myoz2b (ENSPKIG00000002037) ENSPKIG00000002000 fabp2 (ENSPKIG00000001969) elavl2 (ENSPKIG00000001903) smc2 (ENSPKIG00000001788) ecpas (ENSPKIG00000001522) kdm4c (ENSPKIG00000001363) ENSPKIG00000001316 ENSPKIG00000001262 LURAP1L (ENSPKIG00000001229) ENSPKIG00000001213 ENSPKIG00000001132 ADGRL3 (ENSPKIG00000000771) #22 RBPMS (ENSPKIG00000000535) ENSPKIG00000000504 gtf2e2 (ENSPKIG00000000483) ENSPKIG00000000460 pi4k2b (ENSPKIG00000000425) htra3a (ENSPKIG00000000381) ENSPKIG00000000345 CPZ (ENSPKIG00000000318) ENSPKIG00000000307 adra2c (ENSPKIG00000000297) lrpap1 (ENSPKIG00000000278) DOK7 (ENSPKIG00000000227) rgs12b (ENSPKIG00000000155) htt (ENSPKIG00000000098) grk4 (ENSPKIG00000000049) Osteoglossocephalai ANCESTRAL SPECIES 228 ENSGT00800000124172.i ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000168167 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00390000011749 ENSGT00410000029064 ENSGT00390000001491.a ENSGT00390000010434.a ENSGT00940000159570.a ENSGT00950000183001.b.b.a ENSGT00940000156391.d Clupeocephala ANCESTRAL SPECIES 364 ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000168167 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00950000182886.a.b Otomorpha ANCESTRAL SPECIES 13 ENSGT00530000067688 ENSGT00940000159031 ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00390000017890.b.b ENSGT00940000159617 ENSGT00800000124172.i ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a Clupeiformes ANCESTRAL SPECIES 370 ENSGT00390000017890.b.b ENSGT00940000159617.d ENSGT00800000124172.i ENSGT00940000160640 ENSGT00510000047770.c.b ENSGT00940000156823.e ENSGT00390000017010 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a Atlantic herring MODERN SPECIES 9 pop7 (ENSCHAG00000024851) dctn1a (ENSCHAG00000024469) ENSCHAG00000024408 ENSCHAG00000024391 FABP2 (ENSCHAG00000024387) ENSCHAG00000024385 DMRTA1 (ENSCHAG00000024382) ENSCHAG00000024369 ELAVL2 (ENSCHAG00000024234) CAAP1 (ENSCHAG00000024225) PTPRD (ENSCHAG00000022128) ENSCHAG00000022072 TYRP1 (ENSCHAG00000022041) LURAP1L (ENSCHAG00000022033) MPDZ (ENSCHAG00000018153) ADGRL3 (ENSCHAG00000016770) ##22 ENSCHAG00000012496 ENSCHAG00000012178 syt4 (ENSCHAG00000012167) vbp1 (ENSCHAG00000012118) rab39bb (ENSCHAG00000012110) zgc:162171 (ENSCHAG00000012096) ENSCHAG00000011346 zgc:92429 (ENSCHAG00000011286) ENSCHAG00000010906 ENSCHAG00000010868 zgc:109889 (ENSCHAG00000010846) htr2cl1 (ENSCHAG00000010715) ENSCHAG00000010692 tnfsf10l (ENSCHAG00000010677) CLCN5 (ENSCHAG00000007231) Denticle herring MODERN SPECIES GJE1 (ENSDCDG00000015050) txlnbb (ENSDCDG00000015046) DCTN1 (ENSDCDG00000004926) ENSDCDG00000004744 OTOF (ENSDCDG00000004576) metap1 (ENSDCDG00000004459) adh8a (ENSDCDG00000004391) elavl2 (ENSDCDG00000004298) SHPRH (ENSDCDG00000004007) CAAP1 (ENSDCDG00000003981) ENSDCDG00000003979 PTPRD (ENSDCDG00000034628) TYRP1 (ENSDCDG00000034559) LURAP1L (ENSDCDG00000034558) MPDZ (ENSDCDG00000034214) ENSDCDG00000031518 ##22 ENSDCDG00000031443 ENSDCDG00000031441 ENSDCDG00000031359 SLC24A2 (ENSDCDG00000031308) ENSDCDG00000031305 NRXN2 (ENSDCDG00000031126) RASGRP2 (ENSDCDG00000031048) ENSDCDG00000031038 H2AZ1 (ENSDCDG00000031029) DDIT4L (ENSDCDG00000031026) PPP3CA (ENSDCDG00000030774) BANK1 (ENSDCDG00000030753) NFIB (ENSDCDG00000030705) zdhhc21 (ENSDCDG00000030694) plaa (ENSDCDG00000030671) Otophysi ANCESTRAL SPECIES 373 ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806.b ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b Characiphysae ANCESTRAL SPECIES 58 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a ENSGT00940000160483.k.b ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b ENSGT01040000240385.B ENSGT00940000164991.a.a ENSGT00940000160206.e ENSGT00940000161519 ENSGT00940000159445 ENSGT00390000018123.a.b ENSGT01100000263644 ENSGT00390000006970 ENSGT01030000234574.A.b.b ENSGT00950000186357 ENSGT00390000012563 Channel catfish MODERN SPECIES 21 pp1b (ENSIPUG00000011678) rela (ENSIPUG00000011563) zgc:63470 (ENSIPUG00000011545) drap1 (ENSIPUG00000011518) MAP3K11 (ENSIPUG00000011483) ENSIPUG00000011460 ENSIPUG00000011448 ENSIPUG00000011439 NRXN2 (ENSIPUG00000011361) ENSIPUG00000011337 crgm2 (ENSIPUG00000011305) RASGRP2 (ENSIPUG00000011247) SLC29A2 (ENSIPUG00000011209) SLC29A2 (ENSIPUG00000011173) MPDZ (ENSIPUG00000011101) adgrl3 (ENSIPUG00000010583) ##22 ENSIPUG00000010251 hgfac (ENSIPUG00000010221) DOK7 (ENSIPUG00000010189) adra2c (ENSIPUG00000010180) ENSIPUG00000010152 ENSIPUG00000010145 ENSIPUG00000010122 ENSIPUG00000010092 ENSIPUG00000010080 ENSIPUG00000010064 ENSIPUG00000009996 ENSIPUG00000009978 emc4 (ENSIPUG00000009917) lpcat4 (ENSIPUG00000009900) nop10 (ENSIPUG00000009890) Characiphysae_b ANCESTRAL SPECIES 148 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a ENSGT00940000160483.k.b ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b Characoidei ANCESTRAL SPECIES 168 ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000154644.jb.b.g.b ENSGT00940000159867 ENSGT00390000011640 ENSGT00390000012424.a ENSGT00940000161064 ENSGT00940000163749.a.a ENSGT01030000234819 ENSGT00940000155978.a.a ENSGT00940000163149.b.c.b.b.a.a.a ENSGT00940000160483.k.b ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT00940000161707.a.b Red-bellied piranha MODERN SPECIES 51 LURAP1L (ENSPNAG00000014904) ppp1cb (ENSPNAG00000014924) rela (ENSPNAG00000005984) zgc:63470 (ENSPNAG00000014971) drap1 (ENSPNAG00000015008) MAP3K11 (ENSPNAG00000015016) ENSPNAG00000015026 ENSPNAG00000003345 NRXN2 (ENSPNAG00000015184) ENSPNAG00000015200 RASGRP2 (ENSPNAG00000015291) ENSPNAG00000015310 MPDZ (ENSPNAG00000015412) ENSPNAG00000015448 ENSPNAG00000015457 ADGRL3 (ENSPNAG00000015641) ##22 ENSPNAG00000015779 HGFAC (ENSPNAG00000015800) DOK7 (ENSPNAG00000015834) ADRA2C (ENSPNAG00000015848) ENSPNAG00000015957 aptx (ENSPNAG00000015984) SLC44A1 (ENSPNAG00000016046) Mexicana tetra MODERN SPECIES 13 prorsd1 (ENSAMXG00000025264) CCDC88A (ENSAMXG00000020481) PPP4R3C (ENSAMXG00000020618) PNPT1 (ENSAMXG00000042321) ENSAMXG00000020741 ENSAMXG00000036963 ENSAMXG00000039087 ENSAMXG00000031439 ENSAMXG00000031515 ENSAMXG00000025265 ENSAMXG00000040772 ENSAMXG00000041855 RASGRP2 (ENSAMXG00000020940) ENSAMXG00000020980 MPDZ (ENSAMXG00000021159) ADGRL3 (ENSAMXG00000021273) ##22 ENSAMXG00000035435 ENSAMXG00000030987 ENSAMXG00000021540 ENSAMXG00000031940 HGFAC (ENSAMXG00000021594) DOK7 (ENSAMXG00000021597) ADRA2C (ENSAMXG00000025266) ENSAMXG00000042568 ENSAMXG00000031293 SLC24A2 (ENSAMXG00000021601) ltb4r (ENSAMXG00000030787) ltb4r2a (ENSAMXG00000029069) HEATR5B (ENSAMXG00000021607) STRN (ENSAMXG00000021609) ENSAMXG00000033032 Electric eel MODERN SPECIES 1023 ENSEEEG00000011148 ##22 Cyprinoidei ANCESTRAL SPECIES 41 ENSGT00390000013315 ENSGT00390000013104 ENSGT00940000162219.x ENSGT00940000163235.A.a.b ENSGT00940000177923 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000156076.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000157468.a.a.a ENSGT00940000165179.b ENSGT00910000144226 ENSGT00390000005535 ENSGT00940000157089.B ENSGT00950000182898.a.a.a.a.a.g ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a ENSGT00390000015386.b ENSGT01030000234532.B.e.a.a.a.b ENSGT00940000163520.A.a.a.b.q ENSGT00940000166741 ENSGT00940000156397.a.b ENSGT01030000234754 ENSGT00940000167415 ENSGT01040000240385.A.a.b.b ENSGT00940000160527.b ENSGT01030000234592.A.a.a.a.a ENSGT00390000019377.a.a.b ENSGT00390000000230 ENSGT00390000013973.A.b.a.b.d Cyprininae ANCESTRAL SPECIES 290 ENSGT00940000164871.b.e.b.a ENSGT01040000240558.a ENSGT00940000177923 ENSGT00940000156076.a.a.a.a.d.b ENSGT00940000156076.b ENSGT00940000156076.a.a.a.a.c ENSGT00940000157468.a.a.a.e ENSGT00940000165179.b.a.b ENSGT00910000144226 ENSGT00390000005535 ENSGT00940000157089.B ENSGT00950000182898.a.a.a.a.a.g.e ENSGT00940000155586.B.f ENSGT00940000156348.B.n ENSGT00940000155586.B.e.a ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a.b ENSGT00390000015386.b.c.a ENSGT01030000234532.B.e.a.a.a.b.a.a ENSGT00940000166741.d ENSGT00940000156397.a.b.c ENSGT01030000234754.a.b ENSGT00940000167415 ENSGT01040000240385.A.a.b.b ENSGT00940000160527.b.a ENSGT01030000234592.A.a.a.a.a.g ENSGT00940000160527.b.b ENSGT01030000234592.A.a.a.a.a.h ENSGT00390000019377.a.a.b.a ENSGT00390000000230.q.b Goldfish DUPLICATION Goldfish DUPLICATION Goldfish MODERN SPECIES 2720 ADGRL3 (ENSCARG00000061453) ##22 Goldfish MODERN SPECIES 3085 ADGRL3 (ENSCARG00000050502) ##22 Goldfish MODERN SPECIES 25 lrp4 (ENSCARG00000026352) psmd9 (ENSCARG00000027725) ywhae2 (ENSCARG00000027749) ENSCARG00000027850 SIPA1 (ENSCARG00000027900) RASGRP2 (ENSCARG00000027971) slc35c1 (ENSCARG00000028088) tollip (ENSCARG00000028096) ENSCARG00000028141 RPH3A (ENSCARG00000028220) ENSCARG00000028369 HECTD4 (ENSCARG00000028420) MAPK8IP1 (ENSCARG00000029315) ENSCARG00000029360 MPDZ (ENSCARG00000029634) ADGRL3 (ENSCARG00000034602) ##22 ENSCARG00000036171 ENSCARG00000036201 DOK7 (ENSCARG00000036310) ENSCARG00000036325 ENSCARG00000036359 ENSCARG00000005828 ENSCARG00000005833 ENSCARG00000005842 ENSCARG00000005848 ENSCARG00000005877 znf219 (ENSCARG00000005924) ENSCARG00000005944 btr12 (ENSCARG00000005961) ENSCARG00000005983 ENSCARG00000006000 Cyprininae_a ANCESTRAL SPECIES 141 ENSGT01030000234532.A.a.a.a.a.a.a.b ENSGT00940000160644.d ENSGT00940000160483.k.b.d ENSGT00390000013315.a.a ENSGT00390000013104.d.b ENSGT00940000157468.a.a.a.f ENSGT00940000165179.b.a.a ENSGT00910000144226 ENSGT00390000005535 ENSGT00940000157089.B ENSGT00950000182898.a.a.a.a.a.g.e ENSGT00950000182898.a.a.a.a.a.g.f ENSGT00940000155586.B.f ENSGT00940000156348.B.n ENSGT00940000155586.B.e.a ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00940000159778.a.b ENSGT00390000015386.b.c.a ENSGT01030000234532.B.e.a.a.a.b.a.a ENSGT00940000166741.d ENSGT00940000156397.a.b.c ENSGT00940000166741.c ENSGT00940000156397.a.b.d ENSGT01030000234754.b ENSGT00940000167415 ENSGT01040000240385.A.a.b.b ENSGT00940000160527.b.a.a ENSGT01030000234592.A.a.a.a.a.h ENSGT00390000019377.a.a.b.a ENSGT00390000000230.q.b Common carp reference DUPLICATION Common carp reference MODERN SPECIES 6 lrp4 (ENSCCRG00000015632) psmd9 (ENSCCRG00000081299) ywhae2 (ENSCCRG00000065575) ENSCCRG00000061648 ENSCCRG00000057719 ENSCCRG00000069042 slc35c1 (ENSCCRG00000066984) tollip (ENSCCRG00000066323) ENSCCRG00000077788 ENSCCRG00000041593 ENSCCRG00000061890 ENSCCRG00000001161 ENSCCRG00000080446 ENSCCRG00000080579 ENSCCRG00000066362 ENSCCRG00000071847 ##22 ENSCCRG00000045044 ENSCCRG00000043098 ENSCCRG00000043081 ENSCCRG00000077346 ENSCCRG00000054764 ENSCCRG00000070638 ENSCCRG00000070480 ENSCCRG00000053835 ENSCCRG00000078771 ENSCCRG00000065302 ENSCCRG00000070796 ENSCCRG00000061270 ENSCCRG00000000045 ENSCCRG00000057271 ENSCCRG00000056594 Common carp reference MODERN SPECIES ywhae2 (ENSCCRG00000061887) ENSCCRG00000003971 ENSCCRG00000040406 ENSCCRG00000075515 slc35c1 (ENSCCRG00000067739) tollip (ENSCCRG00000020513) ENSCCRG00000056257 ENSCCRG00000071859 ENSCCRG00000082617 ENSCCRG00000074248 ENSCCRG00000073285 mrpl21 (ENSCCRG00000000488) ENSCCRG00000061685 ENSCCRG00000063445 ENSCCRG00000081606 ENSCCRG00000080023 ##22 ENSCCRG00000075826 ENSCCRG00000056466 ENSCCRG00000082189 ENSCCRG00000060855 ENSCCRG00000027851 ENSCCRG00000026577 ENSCCRG00000052846 ENSCCRG00000080695 ENSCCRG00000058836 ENSCCRG00000000161 ENSCCRG00000067756 ENSCCRG00000006041 znf219 (ENSCCRG00000077973) btr12 (ENSCCRG00000016884) ENSCCRG00000019395 Golden-line barbel MODERN SPECIES 1047 ENSSGRG00000055312 mrpl21 (ENSSGRG00000055311) MAPK8IP1 (ENSSGRG00000055310) ENSSGRG00000055309 ENSSGRG00000055308 ENSSGRG00000055306 ENSSGRG00000055305 ##22 Zebrafish MODERN SPECIES 22 ENSDARG00000041086 SIPA1 (ENSDARG00000076697) RASGRP2 (ENSDARG00000099092) ENSDARG00000102247 slc35c1 (ENSDARG00000104669) tollip (ENSDARG00000098486) ENSDARG00000099470 ENSDARG00000104914 ENSDARG00000109688 ENSDARG00000105490 ENSDARG00000098989 HECTD4 (ENSDARG00000101079) mrpl21 (ENSDARG00000003846) MAPK8IP1 (ENSDARG00000090326) ENSDARG00000099078 ADGRL3 (ENSDARG00000090624) ##22 ENSDARG00000105714 ENSDARG00000105782 SLC24A2 (ENSDARG00000063158) ENSDARG00000088625 cbln6 (ENSDARG00000035718) cbln8 (ENSDARG00000019294) ENSDARG00000078979 znf219 (ENSDARG00000079738) ENSDARG00000101446 btr12 (ENSDARG00000051809) ENSDARG00000090371 ENSDARG00000051804 ENSDARG00000068065 casq1b (ENSDARG00000018105) PEA15 (ENSDARG00000079771) Euteleosteomorpha ANCESTRAL SPECIES 191 ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000153617.C.e.a ENSGT00940000155804.k.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00950000182886.a.b Acanthomorphata ANCESTRAL SPECIES 174 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a Euacanthomorphacea ANCESTRAL SPECIES 17 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Percomorphaceae ANCESTRAL SPECIES 18 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Percomorphaceae_B ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Percomorphaceae_C ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Eupercaria ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Tetraodontidae ANCESTRAL SPECIES 29 ENSGT00940000157910 ENSGT00390000001376 ENSGT00390000008294 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155527.j.a ##22 ENSGT00390000017010 ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00390000002596.a ENSGT00390000001189.b.i ENSGT00940000156164.b ENSGT00940000159031 ENSGT00940000157122.b.a Fugu MODERN SPECIES 20 lgi2a (ENSTRUG00000006766) ccdc149a (ENSTRUG00000030376) PPARGC1A (ENSTRUG00000007210) ENSTRUG00000033268 gba3 (ENSTRUG00000007509) KCNIP4 (ENSTRUG00000032857) sec24d (ENSTRUG00000008125) SYNPO2 (ENSTRUG00000019819) myoz2a (ENSTRUG00000008669) USP53 (ENSTRUG00000025974) ENSTRUG00000031970 ENSTRUG00000033349 PTPRD (ENSTRUG00000008887) TYRP1 (ENSTRUG00000012615) LURAP1L (ENSTRUG00000020323) ADGRL3 (ENSTRUG00000002392) ##22 CAAP1 (ENSTRUG00000007809) ENSTRUG00000031453 elavl2 (ENSTRUG00000007867) elavl2 (ENSTRUG00000030581) dmrta1 (ENSTRUG00000027628) ENSTRUG00000000040 RBPMS (ENSTRUG00000000041) DCTN6 (ENSTRUG00000000046) SGCZ (ENSTRUG00000027866) ENSTRUG00000000057 mfsd8 (ENSTRUG00000000059) ENSTRUG00000000063 ENSTRUG00000028527 cldnd1a (ENSTRUG00000008926) ENSTRUG00000009026 Tetraodon MODERN SPECIES 26 ENSTNIG00000001248 ENSTNIG00000011327 sepsecs (ENSTNIG00000011326) PPARGC1A (ENSTNIG00000011325) ENSTNIG00000002174 gba3 (ENSTNIG00000002058) KCNIP4 (ENSTNIG00000011324) sec24d (ENSTNIG00000011323) SYNPO2 (ENSTNIG00000011322) myoz2a (ENSTNIG00000011321) USP53 (ENSTNIG00000011320) PTPRD (ENSTNIG00000011319) TYRP1 (ENSTNIG00000011318) LURAP1L (ENSTNIG00000011317) MPDZ (ENSTNIG00000011316) ADGRL3 (ENSTNIG00000011315) ##22 ENSTNIG00000011314 CAAP1 (ENSTNIG00000011313) elavl2 (ENSTNIG00000011312) ENSTNIG00000019442 DMRTA1 (ENSTNIG00000003206) sumo1 (ENSTNIG00000003205) ENSTNIG00000003204 ENSTNIG00000003203 ENSTNIG00000001618 ENSTNIG00000001154 mfsd8 (ENSTNIG00000003770) ENSTNIG00000000641 ENSTNIG00000003769 RREB1 (ENSTNIG00000004962) rmc1 (ENSTNIG00000004963) Eupecaria_A ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Eupecaria_B ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Eupecaria_C ANCESTRAL SPECIES 20 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 19 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a European seabass MODERN SPECIES 16 ccdc149a (ENSDLAG00005022379) ENSDLAG00005022394 PPARGC1A (ENSDLAG00005022412) gba3 (ENSDLAG00005022428) ADGRA3 (ENSDLAG00005022440) KCNIP4 (ENSDLAG00005022495) sec24d (ENSDLAG00005022522) SYNPO2 (ENSDLAG00005022711) myoz2a (ENSDLAG00005027006) USP53 (ENSDLAG00005022719) PTPRD (ENSDLAG00005022790) ENSDLAG00005023769 ENSDLAG00005023772 ENSDLAG00005031040 MPDZ (ENSDLAG00005023845) ENSDLAG00005024755 ##22 ENSDLAG00005025425 CAAP1 (ENSDLAG00005006023) ENSDLAG00005028286 ENSDLAG00005006521 DMRTA1 (ENSDLAG00005006574) ENSDLAG00005034801 ENSDLAG00005032693 ENSDLAG00005006622 ENSDLAG00005032432 ENSDLAG00005006708 ENSDLAG00005030123 ENSDLAG00005007130 ENSDLAG00005029452 ENSDLAG00005029964 ENSDLAG00005021021 Large yellow croaker MODERN SPECIES 2 lgi2a (ENSLCRG00005012703) ENSLCRG00005012748 ccdc149a (ENSLCRG00005012752) ENSLCRG00005012824 ADGRA3 (ENSLCRG00005012827) gba3 (ENSLCRG00005012834) KCNIP4 (ENSLCRG00005012837) sec24d (ENSLCRG00005012844) SYNPO2 (ENSLCRG00005013058) myoz2a (ENSLCRG00005013059) USP53 (ENSLCRG00005013064) PTPRD (ENSLCRG00005013201) TYRP1 (ENSLCRG00005022626) LURAP1L (ENSLCRG00005022628) MPDZ (ENSLCRG00005022638) ADGRL3 (ENSLCRG00005022709) ##22 ENSLCRG00005023487 ENSLCRG00005023490 ENSLCRG00005023500 elavl2 (ENSLCRG00005023504) gpr137ba (ENSLCRG00005023507) EGLN1 (ENSLCRG00005023508) tsnax (ENSLCRG00005023510) disc1 (ENSLCRG00005023511) SIPA1L2 (ENSLCRG00005023512) ENSLCRG00005023518 ntpcr (ENSLCRG00005023519) ENSLCRG00005023523 ENSLCRG00005023526 KLHDC3 (ENSLCRG00005023527) ENSLCRG00005023528 Gilthead seabream MODERN SPECIES 1 ENSSAUG00010026697 ccdc149a (ENSSAUG00010026696) ENSSAUG00010026692 PPARGC1A (ENSSAUG00010026690) gba3 (ENSSAUG00010026688) ADGRA3 (ENSSAUG00010026684) KCNIP4 (ENSSAUG00010026681) sec24d (ENSSAUG00010026666) SYNPO2 (ENSSAUG00010026663) myoz2a (ENSSAUG00010026662) USP53 (ENSSAUG00010026657) PTPRD (ENSSAUG00010018340) TYRP1 (ENSSAUG00010018023) LURAP1L (ENSSAUG00010018021) MPDZ (ENSSAUG00010013816) ADGRL3 (ENSSAUG00010007883) ##22 ENSSAUG00010002251 CAAP1 (ENSSAUG00010002020) elavl2 (ENSSAUG00010001898) ENSSAUG00010001874 DMRTA1 (ENSSAUG00010001862) FABP2 (ENSSAUG00010001856) RBPMS (ENSSAUG00010001847) DCTN6 (ENSSAUG00010001835) SGCZ (ENSSAUG00010001811) ENSSAUG00010001789 mfsd8 (ENSSAUG00010001388) ENSSAUG00010001343 ENSSAUG00010001337 ENSSAUG00010001321 ENSSAUG00010001304 Perciformes ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00940000156393.a.a Cottioidei ANCESTRAL SPECIES 20 ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00940000156393.a.a Lumpfish MODERN SPECIES 9 PPARGC1A (ENSCLMG00005010970) ENSCLMG00005010965 gba3 (ENSCLMG00005010964) ADGRA3 (ENSCLMG00005010962) KCNIP4 (ENSCLMG00005010960) sec24d (ENSCLMG00005006504) SYNPO2 (ENSCLMG00005006493) myoz2a (ENSCLMG00005006455) USP53 (ENSCLMG00005006452) ENSCLMG00005006450 PTPRD (ENSCLMG00005006368) TYRP1 (ENSCLMG00005006363) LURAP1L (ENSCLMG00005006362) ENSCLMG00005006360 ENSCLMG00005006356 ADGRL3 (ENSCLMG00005006125) ##22 ENSCLMG00005006114 ENSCLMG00005006110 ELAVL2 (ENSCLMG00005006033) ENSCLMG00005006032 DMRTA1 (ENSCLMG00005006031) FABP2 (ENSCLMG00005006029) RBPMS (ENSCLMG00005006022) ENSCLMG00005006019 SGCZ (ENSCLMG00005006017) ENSCLMG00005006014 mfsd8 (ENSCLMG00005006012) ENSCLMG00005006011 ENSCLMG00005006010 ENSCLMG00005006007 ENSCLMG00005006006 Stickleback MODERN SPECIES 7 ccdc149a (ENSGACG00000019569) ENSGACG00000019549 PPARGC1A (ENSGACG00000019546) gba3 (ENSGACG00000019544) ADGRA3 (ENSGACG00000019543) KCNIP4 (ENSGACG00000019541) ENSGACG00000019539 sec24d (ENSGACG00000019537) SYNPO2 (ENSGACG00000019536) myoz2a (ENSGACG00000019535) USP53 (ENSGACG00000019533) PTPRD (ENSGACG00000019528) TYRP1 (ENSGACG00000019503) LURAP1L (ENSGACG00000019502) MPDZ (ENSGACG00000019499) ADGRL3 (ENSGACG00000019498) ##22 ENSGACG00000019493 CAAP1 (ENSGACG00000019489) elavl2 (ENSGACG00000019484) ENSGACG00000019483 DMRTA1 (ENSGACG00000019482) FABP2 (ENSGACG00000019474) RBPMS (ENSGACG00000019471) ENSGACG00000019464 SGCZ (ENSGACG00000019458) ENSGACG00000019456 ENSGACG00000019450 mfsd8 (ENSGACG00000019443) ENSGACG00000019438 ENSGACG00000019436 ENSGACG00000019435 Perciformes_a ANCESTRAL SPECIES 18 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a ENSGT00390000002596.a Pike perch MODERN SPECIES 65 ENSSLUG00000023358 PPARGC1A (ENSSLUG00000023352) gba3 (ENSSLUG00000023345) ADGRA3 (ENSSLUG00000022914) KCNIP4 (ENSSLUG00000022875) sec24d (ENSSLUG00000022346) ENSSLUG00000022306 myoz2a (ENSSLUG00000022299) USP53 (ENSSLUG00000022283) PTPRD (ENSSLUG00000019313) ENSSLUG00000019070 TYRP1 (ENSSLUG00000019066) LURAP1L (ENSSLUG00000019062) MPDZ (ENSSLUG00000015084) ENSSLUG00000014877 ADGRL3 (ENSSLUG00000010650) ##22 ENSSLUG00000025298 ENSSLUG00000025270 elavl2 (ENSSLUG00000025255) Channel bull blenny MODERN SPECIES 9 KCNIP4 (ENSCGOG00000011991) ENSCGOG00000011982 sec24d (ENSCGOG00000010688) ENSCGOG00000010643 ENSCGOG00000010641 ENSCGOG00000010638 myoz2a (ENSCGOG00000022655) USP53 (ENSCGOG00000022651) ENSCGOG00000022646 PTPRD (ENSCGOG00000015824) TYRP1 (ENSCGOG00000015529) LURAP1L (ENSCGOG00000015528) ENSCGOG00000015527 MPDZ (ENSCGOG00000015268) ENSCGOG00000015257 ADGRL3 (ENSCGOG00000012346) ##22 ENSCGOG00000011945 CAAP1 (ENSCGOG00000011927) elavl2 (ENSCGOG00000011921) ENSCGOG00000011919 ENSCGOG00000011912 DMRTA1 (ENSCGOG00000011906) FABP2 (ENSCGOG00000011898) RBPMS (ENSCGOG00000011895) ENSCGOG00000011894 ENSCGOG00000011893 ENSCGOG00000011891 ENSCGOG00000011883 mfsd8 (ENSCGOG00000011812) ENSCGOG00000011808 ccdc96 (ENSCGOG00000011804) Ballan wrasse MODERN SPECIES 1165 ENSLBEG00000027336 ##22 Percomorphaceae_D ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Carangaria ANCESTRAL SPECIES 20 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Carangaria_A ANCESTRAL SPECIES 32 ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Seriola ANCESTRAL SPECIES 92 ENSGT00940000165054.C.e.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e Greater amberjack MODERN SPECIES 104 ccdc149a (ENSSDUG00000007338) ENSSDUG00000007372 PPARGC1A (ENSSDUG00000007408) ADGRA3 (ENSSDUG00000007460) gba3 (ENSSDUG00000007517) KCNIP4 (ENSSDUG00000007532) sec24d (ENSSDUG00000007582) SYNPO2 (ENSSDUG00000007614) myoz2a (ENSSDUG00000007627) USP53 (ENSSDUG00000007643) PTPRD (ENSSDUG00000007674) ENSSDUG00000007762 TYRP1 (ENSSDUG00000007769) LURAP1L (ENSSDUG00000007782) MPDZ (ENSSDUG00000007803) ADGRL3 (ENSSDUG00000007904) ##22 ENSSDUG00000007944 ENSSDUG00000007974 CAAP1 (ENSSDUG00000008127) elavl2 (ENSSDUG00000008140) Yellowtail amberjack MODERN SPECIES 3028 ENSSLDG00000006896 ccdc149a (ENSSLDG00000006908) ENSSLDG00000006937 PPARGC1A (ENSSLDG00000006987) gba3 (ENSSLDG00000007033) ADGRA3 (ENSSLDG00000007055) KCNIP4 (ENSSLDG00000007147) sec24d (ENSSLDG00000007259) SYNPO2 (ENSSLDG00000007325) myoz2a (ENSSLDG00000007340) USP53 (ENSSLDG00000007359) PTPRD (ENSSLDG00000007511) TYRP1 (ENSSLDG00000007913) LURAP1L (ENSSLDG00000007937) MPDZ (ENSSLDG00000007978) ADGRL3 (ENSSLDG00000008084) ##22 ENSSLDG00000008148 ENSSLDG00000008240 CAAP1 (ENSSLDG00000008437) elavl2 (ENSSLDG00000008455) Barramundi perch MODERN SPECIES 17 ENSLCAG00010017032 ccdc149a (ENSLCAG00010017029) ENSLCAG00010017007 PPARGC1A (ENSLCAG00010017001) gba3 (ENSLCAG00010017000) ADGRA3 (ENSLCAG00010016996) KCNIP4 (ENSLCAG00010016993) sec24d (ENSLCAG00010016774) SYNPO2 (ENSLCAG00010016710) myoz2a (ENSLCAG00010016708) USP53 (ENSLCAG00010016704) PTPRD (ENSLCAG00010016357) TYRP1 (ENSLCAG00010016274) LURAP1L (ENSLCAG00010016272) MPDZ (ENSLCAG00010016203) ADGRL3 (ENSLCAG00010015142) ##22 ENSLCAG00010014177 CAAP1 (ENSLCAG00010014034) SLC45A4 (ENSLCAG00010014030) DENND3 (ENSLCAG00010013982) ATP4A (ENSLCAG00010013219) TBRG4 (ENSLCAG00010013111) ENSLCAG00010013106 glipr2l (ENSLCAG00010013101) steap4 (ENSLCAG00010013095) ENSLCAG00010013088 steap4 (ENSLCAG00010013083) ENSLCAG00010013081 ENSLCAG00010013078 mindy3 (ENSLCAG00010013064) ITGA8 (ENSLCAG00010013051) Pleuronectoidei ANCESTRAL SPECIES 17 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a ENSGT00390000002596.a Tongue sole MODERN SPECIES ENSCSEG00000006920 PPARGC1A (ENSCSEG00000006884) gba3 (ENSCSEG00000006878) ENSCSEG00000006872 ADGRA3 (ENSCSEG00000006830) KCNIP4 (ENSCSEG00000006784) sec24d (ENSCSEG00000006764) SYNPO2 (ENSCSEG00000006762) myoz2a (ENSCSEG00000006757) USP53 (ENSCSEG00000006719) PTPRD (ENSCSEG00000006693) ENSCSEG00000006686 TYRP1 (ENSCSEG00000006672) LURAP1L (ENSCSEG00000006665) MPDZ (ENSCSEG00000006527) ADGRL3 (ENSCSEG00000006436) ##22 ENSCSEG00000006362 CAAP1 (ENSCSEG00000006347) elavl2 (ENSCSEG00000006335) ENSCSEG00000006296 ENSCSEG00000006280 ATP1B2 (ENSCSEG00000006274) ENSCSEG00000006137 zgc:123107 (ENSCSEG00000006042) ENSCSEG00000006034 anapc10 (ENSCSEG00000006022) abce1 (ENSCSEG00000005978) CAMTA2 (ENSCSEG00000005942) ENSCSEG00000005932 ENSCSEG00000005928 eno3 (ENSCSEG00000005912) Turbot MODERN SPECIES 11 ENSSMAG00000011559 ENSSMAG00000036898 PPARGC1A (ENSSMAG00000011571) ENSSMAG00000011635 gba3 (ENSSMAG00000011641) ADGRA3 (ENSSMAG00000011652) KCNIP4 (ENSSMAG00000009912) sec24d (ENSSMAG00000009962) SYNPO2 (ENSSMAG00000009992) myoz2a (ENSSMAG00000010051) ENSSMAG00000010060 PTPRD (ENSSMAG00000010085) TYRP1 (ENSSMAG00000010205) LURAP1L (ENSSMAG00000010216) MPDZ (ENSSMAG00000010226) ENSSMAG00000010310 ##22 ENSSMAG00000010548 CAAP1 (ENSSMAG00000010726) ENSSMAG00000010745 ENSSMAG00000010774 DMRTA1 (ENSSMAG00000010840) ENSSMAG00000010853 ENSSMAG00000010871 ENSSMAG00000010905 ENSSMAG00000010942 ENSSMAG00000010960 ENSSMAG00000010999 ENSSMAG00000011023 ENSSMAG00000035603 ENSSMAG00000011064 ENSSMAG00000033283 Anabantaria ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Zig-zag eel MODERN SPECIES 9 ENSMAMG00000026600 ccdc149a (ENSMAMG00000005569) ENSMAMG00000005544 PPARGC1A (ENSMAMG00000005531) gba3 (ENSMAMG00000005526) ADGRA3 (ENSMAMG00000005447) KCNIP4 (ENSMAMG00000005426) sec24d (ENSMAMG00000005409) SYNPO2 (ENSMAMG00000005405) myoz2a (ENSMAMG00000005400) USP53 (ENSMAMG00000005390) PTPRD (ENSMAMG00000005311) TYRP1 (ENSMAMG00000005278) LURAP1L (ENSMAMG00000005271) MPDZ (ENSMAMG00000005182) ENSMAMG00000005041 ##22 ENSMAMG00000004862 CAAP1 (ENSMAMG00000004841) ENSMAMG00000004829 ENSMAMG00000004806 ENSMAMG00000004674 DMRTA1 (ENSMAMG00000004643) ENSMAMG00000004624 ENSMAMG00000004604 ENSMAMG00000004366 ENSMAMG00000004328 ENSMAMG00000004311 ENSMAMG00000004270 ENSMAMG00000026435 ENSMAMG00000025393 ENSMAMG00000025189 Anabantoidei ANCESTRAL SPECIES 24 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00980000203174 ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Climbing perch MODERN SPECIES 9 ccdc149a (ENSATEG00000016582) ENSATEG00000016651 PPARGC1A (ENSATEG00000016702) gba3 (ENSATEG00000016764) ADGRA3 (ENSATEG00000016776) KCNIP4 (ENSATEG00000016803) sec24d (ENSATEG00000016860) SYNPO2 (ENSATEG00000017221) myoz2a (ENSATEG00000017228) USP53 (ENSATEG00000017245) PTPRD (ENSATEG00000017283) TYRP1 (ENSATEG00000017446) LURAP1L (ENSATEG00000017466) ENSATEG00000026345 MPDZ (ENSATEG00000017540) ENSATEG00000017807 ##22 ENSATEG00000028927 ENSATEG00000017971 CAAP1 (ENSATEG00000018064) ENSATEG00000018073 ENSATEG00000027806 DMRTA1 (ENSATEG00000018104) ENSATEG00000018157 ENSATEG00000018184 ENSATEG00000018250 ENSATEG00000018273 ENSATEG00000018302 ENSATEG00000018344 ENSATEG00000018405 ENSATEG00000018746 ENSATEG00000018729 Siamese fighting fish MODERN SPECIES 10 ccdc149a (ENSBSLG00000018107) ENSBSLG00000018041 PPARGC1A (ENSBSLG00000017998) gba3 (ENSBSLG00000017992) ADGRA3 (ENSBSLG00000017720) KCNIP4 (ENSBSLG00000017625) sec24d (ENSBSLG00000015555) SYNPO2 (ENSBSLG00000015420) myoz2a (ENSBSLG00000015413) USP53 (ENSBSLG00000015366) ENSBSLG00000015352 PTPRD (ENSBSLG00000004441) LURAP1L (ENSBSLG00000003235) MPDZ (ENSBSLG00000002122) ENSBSLG00000002092 ADGRL3 (ENSBSLG00000001907) ##22 ENSBSLG00000001323 CAAP1 (ENSBSLG00000001197) elavl2 (ENSBSLG00000000766) ENSBSLG00000000731 DMRTA1 (ENSBSLG00000000722) FABP2 (ENSBSLG00000000720) RBPMS (ENSBSLG00000000706) ENSBSLG00000000686 SGCZ (ENSBSLG00000000669) ENSBSLG00000000651 mfsd8 (ENSBSLG00000000635) ENSBSLG00000000606 ENSBSLG00000000582 cldnd1a (ENSBSLG00000000449) ACY3 (ENSBSLG00000000424) Ovalentaria ANCESTRAL SPECIES 20 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Atherinomorphae ANCESTRAL SPECIES 22 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B Oryzias ANCESTRAL SPECIES 21 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000159026 ENSGT00390000018729.b ENSGT00390000007726.b ENSGT01060000253413 ENSGT00390000002231.b Oryzias_b ANCESTRAL SPECIES 18 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000159026 ENSGT00390000018729.b ENSGT00390000007726.b ENSGT00940000163911.a.a.b.a.a.a.b.a.b ENSGT00940000163911.a.a.b.a.a.a.b.a.a ENSGT01040000240385.A.a.b.a Indian medaka MODERN SPECIES 19 ENSOMEG00000006152 ccdc149a (ENSOMEG00000006119) ENSOMEG00000006075 PPARGC1A (ENSOMEG00000000670) gba3 (ENSOMEG00000005946) ADGRA3 (ENSOMEG00000005915) KCNIP4 (ENSOMEG00000005776) sec24d (ENSOMEG00000005678) ENSOMEG00000005638 myoz2a (ENSOMEG00000005628) ENSOMEG00000005608 PTPRD (ENSOMEG00000005568) TYRP1 (ENSOMEG00000005449) LURAP1L (ENSOMEG00000005431) MPDZ (ENSOMEG00000005411) ADGRL3 (ENSOMEG00000005355) ##22 ENSOMEG00000005308 CAAP1 (ENSOMEG00000005226) elavl2 (ENSOMEG00000005178) ENSOMEG00000005141 ENSOMEG00000005083 DMRTA1 (ENSOMEG00000005064) RBPMS (ENSOMEG00000005044) ENSOMEG00000004999 SGCZ (ENSOMEG00000004970) syt4 (ENSOMEG00000004955) ENSOMEG00000004934 ENSOMEG00000004901 ENSOMEG00000004862 ENSOMEG00000004842 ENSOMEG00000004825 Javanese ricefish MODERN SPECIES 9 ENSOJAG00000013236 ccdc149a (ENSOJAG00000013251) ENSOJAG00000013382 PPARGC1A (ENSOJAG00000013648) gba3 (ENSOJAG00000013665) ADGRA3 (ENSOJAG00000013743) KCNIP4 (ENSOJAG00000014582) sec24d (ENSOJAG00000014803) SYNPO2 (ENSOJAG00000017001) myoz2a (ENSOJAG00000017040) USP53 (ENSOJAG00000017053) PTPRD (ENSOJAG00000017841) ENSOJAG00000023091 TYRP1 (ENSOJAG00000023096) LURAP1L (ENSOJAG00000023101) ADGRL3 (ENSOJAG00000023481) ##22 ENSOJAG00000023853 ENSOJAG00000023915 CAAP1 (ENSOJAG00000023918) elavl2 (ENSOJAG00000023923) ENSOJAG00000023928 DMRTA1 (ENSOJAG00000023929) ENSOJAG00000023932 RBPMS (ENSOJAG00000023935) DCTN6 (ENSOJAG00000023939) SGCZ (ENSOJAG00000023942) syt4 (ENSOJAG00000023949) ENSOJAG00000023952 ENSOJAG00000023959 ENSOJAG00000023963 ENSOJAG00000023968 Oryzias_a ANCESTRAL SPECIES 27 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00980000202414 ENSGT00940000154658.a.g ENSGT00940000154658.a.h ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000159026 ENSGT00390000018729.b ENSGT00390000007726.b ENSGT00940000174504.B Japanese Medaka HdrR MODERN SPECIES 9 ENSORLG00000004819 PPARGC1A (ENSORLG00000004788) gba3 (ENSORLG00000004780) ADGRA3 (ENSORLG00000004767) ENSORLG00000023209 KCNIP4 (ENSORLG00000004748) sec24d (ENSORLG00000004729) SYNPO2 (ENSORLG00000028437) myoz2a (ENSORLG00000025044) USP53 (ENSORLG00000004686) ENSORLG00000022754 PTPRD (ENSORLG00000004650) TYRP1 (ENSORLG00000004326) LURAP1L (ENSORLG00000028081) MPDZ (ENSORLG00000004290) ADGRL3 (ENSORLG00000004254) ##22 ENSORLG00000023983 ENSORLG00000028831 ENSORLG00000027686 CAAP1 (ENSORLG00000004231) ENSORLG00000022241 ELAVL2 (ENSORLG00000004217) ENSORLG00000027845 ENSORLG00000004157 DMRTA1 (ENSORLG00000004153) ENSORLG00000004146 RBPMS (ENSORLG00000004135) ENSORLG00000026244 ENSORLG00000004115 syt4 (ENSORLG00000004098) ENSORLG00000023575 Chinese medaka MODERN SPECIES 966 PTPRD (ENSOSIG00000016986) TYRP1 (ENSOSIG00000019473) LURAP1L (ENSOSIG00000019476) MPDZ (ENSOSIG00000019487) ADGRL3 (ENSOSIG00000019758) ##22 ENSOSIG00000023262 ENSOSIG00000023318 Cyprinodontiformes ANCESTRAL SPECIES 22 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00650000093871 Cyprinodontoidei ANCESTRAL SPECIES 21 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00980000198603.A ENSGT00540000073610.B ENSGT00650000093871 Poeciliinae ANCESTRAL SPECIES 21 ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b.q.b ENSGT01070000253822.D.b.q.a.b ENSGT01070000253822.D.b.q.a.a ENSGT00980000198603.A Poecilia ANCESTRAL SPECIES 48 ENSGT00650000094787 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b.a ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b.q.b ENSGT01070000253822.D.b.q.a.a.a.a.a ENSGT01070000253822.D.b.q.a.b ENSGT01070000253822.D.b.q.a.a.a.b NAME_6 ANCESTRAL SPECIES 398 ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b.b Amazon molly MODERN SPECIES 407 ENSPFOG00000000977 TYRP1 (ENSPFOG00000001047) LURAP1L (ENSPFOG00000001165) MPDZ (ENSPFOG00000001361) ADGRL3 (ENSPFOG00000001870) ##22 ENSPFOG00000002397 CAAP1 (ENSPFOG00000003391) ELAVL2 (ENSPFOG00000003436) ENSPFOG00000003500 Sailfin molly MODERN SPECIES 602 ADGRL3 (ENSPLAG00000001195) ##22 Guppy MODERN SPECIES 448 ENSPREG00000019297 ccdc149a (ENSPREG00000019271) ENSPREG00000019256 PPARGC1A (ENSPREG00000019171) gba3 (ENSPREG00000019133) ADGRA3 (ENSPREG00000019098) KCNIP4 (ENSPREG00000018931) sec24d (ENSPREG00000018869) ENSPREG00000018845 myoz2a (ENSPREG00000018830) USP53 (ENSPREG00000018805) PTPRD (ENSPREG00000018440) TYRP1 (ENSPREG00000018301) LURAP1L (ENSPREG00000018293) ENSPREG00000017839 ADGRL3 (ENSPREG00000017398) ##22 ENSPREG00000017212 CAAP1 (ENSPREG00000017188) elavl2 (ENSPREG00000017160) ENSPREG00000017063 DMRTA1 (ENSPREG00000017021) FABP2 (ENSPREG00000016995) RBPMS (ENSPREG00000016959) DCTN6 (ENSPREG00000016932) SGCZ (ENSPREG00000016904) ENSPREG00000016861 mfsd8 (ENSPREG00000016815) ENSPREG00000016791 ENSPREG00000016765 ENSPREG00000016690 ENSPREG00000016666 Platyfish MODERN SPECIES 5 dhx15 (ENSXMAG00000008425) PPARGC1A (ENSXMAG00000007748) gba3 (ENSXMAG00000007766) ADGRA3 (ENSXMAG00000007771) KCNIP4 (ENSXMAG00000001979) sec24d (ENSXMAG00000001944) ENSXMAG00000001940 myoz2a (ENSXMAG00000023576) USP53 (ENSXMAG00000021530) PTPRD (ENSXMAG00000004920) ENSXMAG00000028029 TYRP1 (ENSXMAG00000004910) LURAP1L (ENSXMAG00000004908) ENSXMAG00000027724 MPDZ (ENSXMAG00000004907) ADGRL3 (ENSXMAG00000004882) ##22 ENSXMAG00000004781 CAAP1 (ENSXMAG00000022303) ELAVL2 (ENSXMAG00000029211) ENSXMAG00000021716 DMRTA1 (ENSXMAG00000012522) FABP2 (ENSXMAG00000027561) RBPMS (ENSXMAG00000027637) DCTN6 (ENSXMAG00000012493) SGCZ (ENSXMAG00000012490) mfsd8 (ENSXMAG00000012556) ENSXMAG00000021162 ENSXMAG00000012545 ENSXMAG00000012542 ENSXMAG00000012538 ENSXMAG00000026245 NAME_4 ANCESTRAL SPECIES 512 ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 Mummichog MODERN SPECIES 2406 TYRP1 (ENSFHEG00000003082) LURAP1L (ENSFHEG00000000611) MPDZ (ENSFHEG00000003047) ENSFHEG00000002996 ENSFHEG00000002960 ADGRL3 (ENSFHEG00000002945) ##22 ENSFHEG00000002892 Sheepshead minnow MODERN SPECIES 414 TYRP1 (ENSCVAG00000003071) LURAP1L (ENSCVAG00000003078) MPDZ (ENSCVAG00000000695) ENSCVAG00000003218 ADGRL3 (ENSCVAG00000003326) ##22 ENSCVAG00000003342 ENSCVAG00000003346 Aplocheiloidei ANCESTRAL SPECIES 65 ENSGT00940000157294.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B Turquoise killifish MODERN SPECIES 1613 ENSNFUG00015023290 ENSNFUG00015023288 ENSNFUG00015023287 ENSNFUG00015023285 ENSNFUG00015023284 ENSNFUG00015023282 PTPRD (ENSNFUG00015006628) ENSNFUG00015005452 ENSNFUG00015005449 ENSNFUG00015005437 TYRP1 (ENSNFUG00015005425) LURAP1L (ENSNFUG00015005421) MPDZ (ENSNFUG00015004270) ENSNFUG00015004062 ENSNFUG00015004059 LPHN3 (ENSNFUG00015002277) ##22 ENSNFUG00015000803 FP236812.4 (ENSNFUG00015000426) ENSNFUG00015000422 ENSNFUG00015000419 ENSNFUG00015000415 elavl2 (ENSNFUG00015000395) PRKCSH (ENSNFUG00015000360) DMRTA1 (ENSNFUG00015000348) FABP2 (ENSNFUG00015000342) RBPMS (ENSNFUG00015000331) DCTN6 (ENSNFUG00015000312) SGCZ (ENSNFUG00015000297) ZNF438 (ENSNFUG00015000285) ENSNFUG00015000281 BX470141.1 (ENSNFUG00015000266) Mangrove rivulus MODERN SPECIES 29 ENSKMAG00000005335 PPARGC1A (ENSKMAG00000005390) ENSKMAG00000005471 gba3 (ENSKMAG00000005482) ADGRA3 (ENSKMAG00000005518) KCNIP4 (ENSKMAG00000005612) ENSKMAG00000005659 sec24d (ENSKMAG00000005695) ENSKMAG00000005720 myoz2a (ENSKMAG00000005757) USP53 (ENSKMAG00000005777) PTPRD (ENSKMAG00000005817) TYRP1 (ENSKMAG00000005890) LURAP1L (ENSKMAG00000005922) MPDZ (ENSKMAG00000005956) ADGRL3 (ENSKMAG00000006060) ##22 ENSKMAG00000006133 CAAP1 (ENSKMAG00000006286) elavl2 (ENSKMAG00000006299) ENSKMAG00000006331 DMRTA1 (ENSKMAG00000006350) ENSKMAG00000006358 RBPMS (ENSKMAG00000006377) SGCZ (ENSKMAG00000006407) ENSKMAG00000006468 mfsd8 (ENSKMAG00000006512) ENSKMAG00000006564 ENSKMAG00000006583 Ovalentaria_B ANCESTRAL SPECIES 19 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.A ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Cichlidae ANCESTRAL SPECIES 20 ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Pseudocrenilabrinae ANCESTRAL SPECIES 18 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Nile tilapia MODERN SPECIES 15 ENSONIG00000039847 ccdc149a (ENSONIG00000028055) ENSONIG00000007642 PPARGC1A (ENSONIG00000007635) gba3 (ENSONIG00000007634) ADGRA3 (ENSONIG00000036115) KCNIP4 (ENSONIG00000041474) sec24d (ENSONIG00000007619) SYNPO2 (ENSONIG00000032796) myoz2a (ENSONIG00000007614) USP53 (ENSONIG00000007612) PTPRD (ENSONIG00000007588) TYRP1 (ENSONIG00000007584) LURAP1L (ENSONIG00000007582) MPDZ (ENSONIG00000007574) ADGRL3 (ENSONIG00000007571) ##22 ENSONIG00000028332 ENSONIG00000007557 ENSONIG00000030865 ENSONIG00000033798 elavl2 (ENSONIG00000007552) ENSONIG00000038581 ENSONIG00000040635 ENSONIG00000027429 FABP2 (ENSONIG00000007548) RBPMS (ENSONIG00000007546) ENSONIG00000007544 SGCZ (ENSONIG00000007542) ENSONIG00000007538 mfsd8 (ENSONIG00000007537) ENSONIG00000032206 Pseudocrenilabrinae_A ANCESTRAL SPECIES 23 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Haplochromini ANCESTRAL SPECIES 31 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Burton s mouthbrooder MODERN SPECIES 393 TYRP1 (ENSHBUG00000006209) LURAP1L (ENSHBUG00000001020) MPDZ (ENSHBUG00000006186) ADGRL3 (ENSHBUG00000006141) ##22 ENSHBUG00000006091 ENSHBUG00000006066 CAAP1 (ENSHBUG00000005978) elavl2 (ENSHBUG00000005968) ENSHBUG00000005942 DMRTA1 (ENSHBUG00000000928) FABP2 (ENSHBUG00000005917) RBPMS (ENSHBUG00000005888) ENSHBUG00000005870 ENSHBUG00000005832 Haplochromini_A ANCESTRAL SPECIES 35 ENSGT00940000165054.C.f.d ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a P. nyererei MODERN SPECIES 421 ENSPNYG00000006753 ccdc149a (ENSPNYG00000006765) ENSPNYG00000006790 PPARGC1A (ENSPNYG00000006846) gba3 (ENSPNYG00000006891) ADGRA3 (ENSPNYG00000006906) KCNIP4 (ENSPNYG00000006925) sec24d (ENSPNYG00000006950) ENSPNYG00000006966 myoz2a (ENSPNYG00000006977) ENSPNYG00000007004 PTPRD (ENSPNYG00000007040) TYRP1 (ENSPNYG00000007139) LURAP1L (ENSPNYG00000007165) MPDZ (ENSPNYG00000007185) ADGRL3 (ENSPNYG00000007344) ##22 Haplochromini_B ANCESTRAL SPECIES 25 ENSGT00940000165054.C.f.c.a.a.a ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00540000073610.B ENSGT00940000156393.a.a Zebra mbuna MODERN SPECIES 1106 ENSMZEG00005001757 PPARGC1A (ENSMZEG00005001739) ENSMZEG00005001709 gba3 (ENSMZEG00005001698) ADGRA3 (ENSMZEG00005001689) KCNIP4 (ENSMZEG00005001667) sec24d (ENSMZEG00005001595) ENSMZEG00005001547 myoz2a (ENSMZEG00005001520) USP53 (ENSMZEG00005001507) PTPRD (ENSMZEG00005001243) ENSMZEG00005001208 TYRP1 (ENSMZEG00005001187) LURAP1L (ENSMZEG00005001183) MPDZ (ENSMZEG00005001094) ADGRL3 (ENSMZEG00005001028) ##22 ENSMZEG00005000817 CAAP1 (ENSMZEG00005000801) elavl2 (ENSMZEG00005000778) ENSMZEG00005000772 DMRTA1 (ENSMZEG00005000752) FABP2 (ENSMZEG00005000743) RBPMS (ENSMZEG00005000698) ENSMZEG00005000647 SGCZ (ENSMZEG00005000612) ENSMZEG00005000585 mfsd8 (ENSMZEG00005000569) ENSMZEG00005000528 ENSMZEG00005000495 ENSMZEG00005000478 cldnd1a (ENSMZEG00005000455) Eastern happy MODERN SPECIES 15 ENSACLG00000000737 ENSACLG00000000749 ENSACLG00000000765 PPARGC1A (ENSACLG00000001002) gba3 (ENSACLG00000001126) ADGRA3 (ENSACLG00000001140) KCNIP4 (ENSACLG00000001315) sec24d (ENSACLG00000001362) ENSACLG00000001403 myoz2a (ENSACLG00000001413) USP53 (ENSACLG00000001439) PTPRD (ENSACLG00000001550) TYRP1 (ENSACLG00000001942) LURAP1L (ENSACLG00000001998) MPDZ (ENSACLG00000002011) ADGRL3 (ENSACLG00000002240) ##22 ENSACLG00000002311 ENSACLG00000002328 CAAP1 (ENSACLG00000002613) elavl2 (ENSACLG00000002715) ENSACLG00000002778 DMRTA1 (ENSACLG00000002823) FABP2 (ENSACLG00000002847) RBPMS (ENSACLG00000002926) ENSACLG00000002952 SGCZ (ENSACLG00000003007) ENSACLG00000003019 mfsd8 (ENSACLG00000003047) ENSACLG00000003069 ENSACLG00000003117 ENSACLG00000003125 Lyretail cichlid MODERN SPECIES 446 ADGRL3 (ENSNBRG00000009989) ##22 ENSNBRG00000010023 ENSNBRG00000010113 CAAP1 (ENSNBRG00000010153) elavl2 (ENSNBRG00000010284) ENSNBRG00000010299 DMRTA1 (ENSNBRG00000010312) FABP2 (ENSNBRG00000010321) ENSNBRG00000010333 SGCZ (ENSNBRG00000010366) mfsd8 (ENSNBRG00000010425) ENSNBRG00000010487 ENSNBRG00000010513 ZFP91 (ENSNBRG00000010534) Midas cichlid MODERN SPECIES 793 ccdc149a (ENSACIG00000009651) dhx15 (ENSACIG00000009701) PPARGC1A (ENSACIG00000009732) gba3 (ENSACIG00000009785) ADGRA3 (ENSACIG00000009827) KCNIP4 (ENSACIG00000009882) sec24d (ENSACIG00000009914) SYNPO2 (ENSACIG00000010161) myoz2a (ENSACIG00000010197) USP53 (ENSACIG00000010321) PTPRD (ENSACIG00000010385) TYRP1 (ENSACIG00000010444) LURAP1L (ENSACIG00000010470) MPDZ (ENSACIG00000010482) ADGRL3 (ENSACIG00000010583) ##22 ENSACIG00000010635 CAAP1 (ENSACIG00000010733) elavl2 (ENSACIG00000010855) ENSACIG00000011339 DMRTA1 (ENSACIG00000011367) FABP2 (ENSACIG00000011389) RBPMS (ENSACIG00000011395) ENSACIG00000011410 SGCZ (ENSACIG00000011434) ENSACIG00000011477 mfsd8 (ENSACIG00000011553) ENSACIG00000011583 ENSACIG00000011601 ZFP91 (ENSACIG00000011617) Pomacentridae ANCESTRAL SPECIES 28 ENSGT00940000157294.d ENSGT00940000165054.C.f ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a.e ENSGT00940000154658.a.f ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT00940000166038 Pomacentridae_A ANCESTRAL SPECIES 22 ENSGT00940000165054.C.f.b ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a.f ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT01090000260059.a.b.b.b.a.d.a.b ENSGT00940000166038 Amphiprion ANCESTRAL SPECIES 96 ENSGT00390000015958.d ENSGT00940000155800.a.a ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000162226.b ENSGT00940000158985 ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00990000203806 ENSGT00940000154658.a.f ENSGT00390000017010 ENSGT00940000156823.e ENSGT00510000047770.c.b ENSGT00940000160640 ENSGT00800000124172.i ENSGT00940000159617 ENSGT00390000017890.b.b ENSGT00940000157146.a.a ENSGT00940000161036.A.e ENSGT00530000063854 ENSGT01070000253822.D.b ENSGT01090000260059.a.b.b.b.a.d.a.b ENSGT00940000166038 Orange clownfish MODERN SPECIES 15 ENSAPEG00000022664 KCNIP4 (ENSAPEG00000022684) sec24d (ENSAPEG00000022743) ENSAPEG00000022778 myoz2a (ENSAPEG00000022815) USP53 (ENSAPEG00000022822) PTPRD (ENSAPEG00000022919) TYRP1 (ENSAPEG00000023168) LURAP1L (ENSAPEG00000023192) ENSAPEG00000023197 ENSAPEG00000023207 ENSAPEG00000023222 ENSAPEG00000023231 ENSAPEG00000023237 ENSAPEG00000023255 ADGRL3 (ENSAPEG00000023284) ##22 ENSAPEG00000023314 ENSAPEG00000023327 ENSAPEG00000023340 ENSAPEG00000023386 CAAP1 (ENSAPEG00000023464) elavl2 (ENSAPEG00000023474) ENSAPEG00000023497 DMRTA1 (ENSAPEG00000023525) FABP2 (ENSAPEG00000023534) RBPMS (ENSAPEG00000023543) ENSAPEG00000023550 SGCZ (ENSAPEG00000023566) ENSAPEG00000023603 mfsd8 (ENSAPEG00000023620) ENSAPEG00000023637 Clown anemonefish MODERN SPECIES 3582 ADGRA3 (ENSAOCG00000000992) ENSAOCG00000014772 KCNIP4 (ENSAOCG00000014839) sec24d (ENSAOCG00000014868) ENSAOCG00000014874 myoz2a (ENSAOCG00000014887) USP53 (ENSAOCG00000014900) PTPRD (ENSAOCG00000015122) TYRP1 (ENSAOCG00000015186) LURAP1L (ENSAOCG00000015194) MPDZ (ENSAOCG00000015306) ENSAOCG00000015340 ADGRL3 (ENSAOCG00000015401) ##22 Spiny chromis MODERN SPECIES 1031 ADGRL3 (ENSAPOG00000015258) ##22 ENSAPOG00000015279 Bicolor damselfish MODERN SPECIES 1874 ENSSPAG00000012755 ##22 ENSSPAG00000012738 ENSSPAG00000012730 Tiger tail seahorse MODERN SPECIES 263 ENSHCOG00000006220 TYRP1 (ENSHCOG00000006206) LURAP1L (ENSHCOG00000006193) ENSHCOG00000006190 ENSHCOG00000006162 ENSHCOG00000006079 ADGRL3 (ENSHCOG00000006063) ##22 ENSHCOG00000006029 elavl2 (ENSHCOG00000005961) ENSHCOG00000005917 ENSHCOG00000005903 ENSHCOG00000005785 RBPMS (ENSHCOG00000005774) ENSHCOG00000005755 mfsd8 (ENSHCOG00000005735) ENSHCOG00000005564 ENSHCOG00000000671 pde5ab (ENSHCOG00000005548) ENSHCOG00000005502 mad2l1 (ENSHCOG00000000878) ENSHCOG00000005473 ENSHCOG00000000622 Pinecone sodierfish MODERN SPECIES 9 ccdc149a (ENSMMDG00005015256) sod3a (ENSMMDG00005015252) ENSMMDG00005014665 PPARGC1A (ENSMMDG00005014661) gba3 (ENSMMDG00005014659) ADGRA3 (ENSMMDG00005013961) KCNIP4 (ENSMMDG00005013889) sec24d (ENSMMDG00005013882) SYNPO2 (ENSMMDG00005013867) myoz2a (ENSMMDG00005013846) USP53 (ENSMMDG00005013843) PTPRD (ENSMMDG00005013826) TYRP1 (ENSMMDG00005013822) LURAP1L (ENSMMDG00005013820) MPDZ (ENSMMDG00005013814) ADGRL3 (ENSMMDG00005011905) ##22 ENSMMDG00005011884 CAAP1 (ENSMMDG00005011878) elavl2 (ENSMMDG00005011843) ENSMMDG00005011836 DMRTA1 (ENSMMDG00005011830) FABP2 (ENSMMDG00005011827) RBPMS (ENSMMDG00005011825) DCTN6 (ENSMMDG00005011824) SGCZ (ENSMMDG00005011821) ENSMMDG00005011818 mfsd8 (ENSMMDG00005011787) ENSMMDG00005011775 ENSMMDG00005011772 ENSMMDG00005011769 ENSMMDG00005011765 Protacanthopterygii ANCESTRAL SPECIES 20 ENSGT00940000153289.a.a.b ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a ENSGT00940000160460 ENSGT00940000157235 ENSGT00940000158985.e ENSGT00950000182924.A.b.a.b ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00940000153617.B ENSGT00940000155804.k.a ENSGT00530000063790.b ENSGT00940000155586.B ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00950000182886.a.b ENSGT01090000260185.a ENSGT00940000154273.b ENSGT00940000159844 ENSGT00940000159372 ENSGT00940000160289 ENSGT00940000161071 ENSGT00940000166370 ENSGT00730000112287 ENSGT00940000174877 ENSGT00950000182903.a.b.i ENSGT01100000263613 ENSGT00940000163927.a.a.v ENSGT00940000153491.b.b.b Northern pike MODERN SPECIES 23 ccdc149a (ENSELUG00000016931) dhx15 (ENSELUG00000016984) PPARGC1A (ENSELUG00000017027) gba3 (ENSELUG00000017046) ADGRA3 (ENSELUG00000000643) KCNIP4 (ENSELUG00000017200) sec24d (ENSELUG00000017252) SYNPO2 (ENSELUG00000017264) myoz2a (ENSELUG00000017272) USP53 (ENSELUG00000017340) PTPRD (ENSELUG00000017519) ENSELUG00000026202 TYRP1 (ENSELUG00000017554) LURAP1L (ENSELUG00000000688) MPDZ (ENSELUG00000017678) ADGRL3 (ENSELUG00000017939) ##22 ENSELUG00000026228 ENSELUG00000018451 ENSELUG00000018661 ENSELUG00000026966 ENSELUG00000018725 BCL6B (ENSELUG00000018787) SLC16A13 (ENSELUG00000018819) acap1 (ENSELUG00000018894) agfg2 (ENSELUG00000018937) ENSELUG00000018954 si:ch73-335l21.4 (ENSELUG00000018979) dvl2 (ENSELUG00000019029) ENSELUG00000019044 ENSELUG00000027323 ENSELUG00000019034 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 256 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.b.d ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000161071.i ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.a ENSGT00940000158535 ENSGT00940000154838.A.f.b.b ENSGT00940000164016.e ENSGT00940000161062.c.b Salmoninae_a ANCESTRAL SPECIES 20 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT01090000260185.a.b ENSGT00940000154273.b.h ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000161071.i ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.a ENSGT00730000112044.e.a.b ENSGT01100000263613.c Salmo ANCESTRAL SPECIES 49 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.a.a ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00940000154273.b.h ENSGT01090000260185.a.b ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000155511.m ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00950000182903.a.b.i.g.a ENSGT00940000158535.w ENSGT00730000112044.e.a.b ENSGT01100000263613.c River trout MODERN SPECIES 38 ENSSTUG00000040665 ENSSTUG00000040820 ENSSTUG00000040837 PPARGC1A (ENSSTUG00000040880) ADGRA3 (ENSSTUG00000040967) KCNIP4 (ENSSTUG00000041209) ENSSTUG00000041307 sec24d (ENSSTUG00000041379) SYNPO2 (ENSSTUG00000043865) MYOZ2 (ENSSTUG00000043874) USP53 (ENSSTUG00000043882) PTPRD (ENSSTUG00000044156) TYRP1 (ENSSTUG00000050648) LURAP1L (ENSSTUG00000050649) MPDZ (ENSSTUG00000050655) ADGRL3 (ENSSTUG00000050737) ##22 ENSSTUG00000051008 ENSSTUG00000051014 ENSSTUG00000030551 ENSSTUG00000030569 BCL6B (ENSSTUG00000030577) acap1 (ENSSTUG00000030593) ENSSTUG00000030841 ENSSTUG00000030850 si:ch73-335l21.4 (ENSSTUG00000030854) dvl2 (ENSSTUG00000030865) ENSSTUG00000031101 ENSSTUG00000031105 ponzr1 (ENSSTUG00000031108) ENSSTUG00000031117 ENSSTUG00000031130 Atlantic salmon MODERN SPECIES 26 ENSSSAG00000063308 ENSSSAG00000106996 PPARGC1A (ENSSSAG00000063349) ENSSSAG00000063507 KCNIP4 (ENSSSAG00000092519) sec24d (ENSSSAG00000002760) SYNPO2 (ENSSSAG00000007715) MYOZ2 (ENSSSAG00000102011) USP53 (ENSSSAG00000007723) ENSSSAG00000035522 ENSSSAG00000112123 PTPRD (ENSSSAG00000111433) ENSSSAG00000076592 ci150 (ENSSSAG00000076598) ENSSSAG00000076710 ENSSSAG00000078516 ##22 ENSSSAG00000079215 ENSSSAG00000101481 ENSSSAG00000079518 ENSSSAG00000109805 ENSSSAG00000079541 ENSSSAG00000114456 ENSSSAG00000079545 acap1 (ENSSSAG00000087747) ENSSSAG00000079568 ENSSSAG00000092192 si:ch73-335l21.4 (ENSSSAG00000079580) dvl2 (ENSSSAG00000079590) ENSSSAG00000079609 ENSSSAG00000079611 ENSSSAG00000079612 Oncorhynchus ANCESTRAL SPECIES 9 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00940000154273.b.h.a ENSGT00940000156022.a.c.a ENSGT00940000159844.h ENSGT00940000160289.l ENSGT00940000161071.i ENSGT00940000166370.f ENSGT00730000112287.h ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.a ENSGT00730000112044.e.a.b ENSGT01100000263613.c ENSGT00940000163927.a.a.u Rainbow trout MODERN SPECIES 13 ENSOMYG00000057396 ENSOMYG00000062329 PPARGC1A (ENSOMYG00000045926) ENSOMYG00000045869 ENSOMYG00000045831 KCNIP4 (ENSOMYG00000045813) sec24d (ENSOMYG00000045731) SYNPO2 (ENSOMYG00000045708) MYOZ2 (ENSOMYG00000055798) ENSOMYG00000025319 USP53 (ENSOMYG00000045689) PTPRD (ENSOMYG00000044756) TYRP1 (ENSOMYG00000044591) LURAP1L (ENSOMYG00000044588) MPDZ (ENSOMYG00000043957) ENSOMYG00000034945 ##22 ENSOMYG00000033362 ENSOMYG00000033004 ENSOMYG00000032995 ENSOMYG00000055106 ENSOMYG00000032987 ENSOMYG00000032944 ENSOMYG00000032847 acap1 (ENSOMYG00000030898) ENSOMYG00000071940 agfg2 (ENSOMYG00000030472) ENSOMYG00000030390 si:ch73-335l21.4 (ENSOMYG00000030444) ENSOMYG00000018086 dvl2 (ENSOMYG00000030433) ENSOMYG00000030413 Oncorhynchus_a ANCESTRAL SPECIES 16 ENSGT00940000157772.c ENSGT00940000153289.a.a.b.c ENSGT00940000165054.B ENSGT00940000155800.b ENSGT00950000183137.b.a.i ENSGT00940000157235.l ENSGT00940000158985.e.b ENSGT00950000182924.A.b.a.b.h ENSGT00950000183054.a.a.a.a.h ENSGT00950000183027.b.b.e ENSGT00940000156337.c.g ENSGT00940000153617.B.h ENSGT00940000155804.k.a.a ENSGT00530000063790.b.d ENSGT00940000155586.B.g.b ENSGT00940000155527.j.a.e.a ##22 ENSGT00940000154658.a.d ENSGT00940000156022.a.c.b ENSGT01090000260185.a.a ENSGT00730000112044.e.a.b ENSGT01100000263613.c ENSGT00940000163927.a.a.u ENSGT00940000153491.b.b.b.c ENSGT00940000166316.e ENSGT00390000014072.B ENSGT00940000156128.a.a ENSGT00940000165960.b ENSGT00940000167107 ENSGT00390000000592.w.b ENSGT00940000165100.b.c ENSGT00940000165987.b Coho salmon MODERN SPECIES 29 ENSOKIG00005003493 PPARGC1A (ENSOKIG00005003470) ADGRA3 (ENSOKIG00005003387) ENSOKIG00005003345 KCNIP4 (ENSOKIG00005003328) sec24d (ENSOKIG00005002237) SYNPO2 (ENSOKIG00005001919) MYOZ2 (ENSOKIG00005001910) USP53 (ENSOKIG00005001862) ENSOKIG00005001836 ENSOKIG00005047144 PTPRD (ENSOKIG00005029261) TYRP1 (ENSOKIG00005028467) LURAP1L (ENSOKIG00005028452) MPDZ (ENSOKIG00005022843) ADGRL3 (ENSOKIG00005016342) ##22 ENSOKIG00005016099 ENSOKIG00005015595 ENSOKIG00005015528 ENSOKIG00005015469 BCL6B (ENSOKIG00005015446) acap1 (ENSOKIG00005015336) agfg2 (ENSOKIG00005015299) ENSOKIG00005015281 si:ch73-335l21.4 (ENSOKIG00005015257) dvl2 (ENSOKIG00005015058) ENSOKIG00005015036 ENSOKIG00005015029 ENSOKIG00005015027 ponzr1 (ENSOKIG00005015022) ENSOKIG00005015014 Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 55 ADGRL3 (ENSOTSG00005042055) ##22 ENSOTSG00005046578 TRIP6 (ENSOTSG00005046586) ENSOTSG00005046589 BCL6B (ENSOTSG00005046590) acap1 (ENSOTSG00005046591) agfg2 (ENSOTSG00005046596) ENSOTSG00005046598 si:ch73-335l21.4 (ENSOTSG00005046600) dvl2 (ENSOTSG00005046604) ENSOTSG00005046662 ENSOTSG00005046664 ponzr1 (ENSOTSG00005046665) ENSOTSG00005046667 cnpy4 (ENSOTSG00005046668) ENSOTSG00005046669 Chinook salmon MODERN SPECIES 40 ADGRL3 (ENSOTSG00005041695) ##22 ENSOTSG00005041609 ENSOTSG00005041603 ENSOTSG00005041601 ENSOTSG00005041600 BCL6B (ENSOTSG00005041595) acap1 (ENSOTSG00005037711) agfg2 (ENSOTSG00005037693) ENSOTSG00005037692 si:ch73-335l21.4 (ENSOTSG00005037688) si:ch73-335l21.2 (ENSOTSG00005037687) dvl2 (ENSOTSG00005037686) ENSOTSG00005037678 ENSOTSG00005037674 ponzr1 (ENSOTSG00005037672) ENSOTSG00005037670 Huchen MODERN SPECIES 230 MPDZ (ENSHHUG00000027039) ENSHHUG00000026094 ##22 ENSHHUG00000026084 ENSHHUG00000025821 ENSHHUG00000025793 TRIP6 (ENSHHUG00000025785) ENSHHUG00000025780 BCL6B (ENSHHUG00000025776) acap1 (ENSHHUG00000025677) agfg2 (ENSHHUG00000025669) zgc:103625 (ENSHHUG00000025667) Salmoninae ANCESTRAL SPECIES 594 ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT00940000154273.b.g ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Salmoninae_a ANCESTRAL SPECIES 34 ENSGT00940000163471.a.f ENSGT00390000015958.d ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Salmo ANCESTRAL SPECIES 18 ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j ENSGT00940000160460 ENSGT00940000157235.k ENSGT00940000162818.c.a.g.b ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT01060000248649 ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00940000174877 ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.u ENSGT00940000163927.a.a.v.a Atlantic salmon MODERN SPECIES 9 dhx15 (ENSSSAG00000067298) PPARGC1A (ENSSSAG00000108573) gba3 (ENSSSAG00000082579) ADGRA3 (ENSSSAG00000069698) KCNIP4 (ENSSSAG00000121775) ENSSSAG00000101838 sec24d (ENSSSAG00000069906) ENSSSAG00000110901 ENSSSAG00000074270 MYOZ2 (ENSSSAG00000074272) USP53 (ENSSSAG00000074275) PTPRD (ENSSSAG00000096916) tyrp-1 (ENSSSAG00000075543) LURAP1L (ENSSSAG00000122135) ENSSSAG00000075588 ENSSSAG00000076648 ##22 ENSSSAG00000079701 ENSSSAG00000117990 ENSSSAG00000079961 ENSSSAG00000079969 ENSSSAG00000079975 acap1 (ENSSSAG00000080011) agfg2 (ENSSSAG00000080121) ENSSSAG00000080127 si:ch73-335l21.2 (ENSSSAG00000080136) dvl2 (ENSSSAG00000080142) ENSSSAG00000080197 ENSSSAG00000090733 ENSSSAG00000113794 ponzr1 (ENSSSAG00000080201) ENSSSAG00000098248 River trout MODERN SPECIES 35 ccdc149a (ENSSTUG00000001799) dhx15 (ENSSTUG00000002166) PPARGC1A (ENSSTUG00000002234) gba3 (ENSSTUG00000002255) ADGRA3 (ENSSTUG00000002273) ENSSTUG00000002450 KCNIP4 (ENSSTUG00000002478) SEC24C (ENSSTUG00000002697) SYNPO2 (ENSSTUG00000005339) ENSSTUG00000005351 USP53 (ENSSTUG00000005403) PTPRD (ENSSTUG00000005964) TYRP1 (ENSSTUG00000028684) LURAP1L (ENSSTUG00000028702) MPDZ (ENSSTUG00000028873) ADGRL3 (ENSSTUG00000033369) ##22 ENSSTUG00000040419 ENSSTUG00000040514 ENSSTUG00000040538 BCL6B (ENSSTUG00000040579) SLC16A13 (ENSSTUG00000040627) ENSSTUG00000040660 acap1 (ENSSTUG00000040685) agfg2 (ENSSTUG00000040829) ENSSTUG00000040864 si:ch73-335l21.4 (ENSSTUG00000040890) dvl2 (ENSSTUG00000040929) ENSSTUG00000041643 ENSSTUG00000041708 ponzr1 (ENSSTUG00000041721) ENSSTUG00000041735 Oncorhynchus ANCESTRAL SPECIES 31 ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j.a ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00960000188752.b.a.a.b ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Oncorhynchus_a ANCESTRAL SPECIES 30 ENSGT00940000155800.a.b.c ENSGT00950000183137.b.a.j.a ENSGT00940000160460 ENSGT00940000157235.k ENSGT00970000193500 ENSGT00940000158985.f ENSGT00950000182924.A.b.a.b.g ENSGT00950000183054.a.a.a.a.g ENSGT00950000183027.b.b.f ENSGT00940000156337.c.h ENSGT00940000153617.B.g ENSGT00960000188752.b.a.a.b ENSGT00940000155804.k.a.b ENSGT00530000063790.b.c ENSGT00940000155586.B.g.a ENSGT00940000155527.j.a.e.b ##22 ENSGT00940000154658.a.c ENSGT01090000260185.b ENSGT00940000156022.a.d ENSGT00940000159844.g ENSGT00940000159372 ENSGT00940000160289.k ENSGT00940000161071.j ENSGT00940000166370.e ENSGT00730000112287.g ENSGT00950000182903.a.b.i.g.b ENSGT00990000208909 ENSGT01100000263613.d ENSGT00940000163927.a.a.v.a ENSGT00940000153491.b.b.b.d ENSGT00940000166316.f Chinook salmon MODERN SPECIES 1 dhx15 (ENSOTSG00005047193) PPARGC1A (ENSOTSG00005047184) gba3 (ENSOTSG00005047182) ADGRA3 (ENSOTSG00005047179) ENSOTSG00005047174 KCNIP4 (ENSOTSG00005047173) sec24d (ENSOTSG00005046997) ENSOTSG00005046991 MYOZ2 (ENSOTSG00005046989) USP53 (ENSOTSG00005046984) PTPRD (ENSOTSG00005024026) ENSOTSG00005023889 TYRP1 (ENSOTSG00005023884) MPDZ (ENSOTSG00005015616) cdk6 (ENSOTSG00005015574) ADGRL3 (ENSOTSG00005008372) ##22 ENSOTSG00005008304 ENSOTSG00005008295 ENSOTSG00005008294 ENSOTSG00005008291 SLC16A13 (ENSOTSG00005008287) acap1 (ENSOTSG00005002953) agfg2 (ENSOTSG00005002772) si:ch73-335l21.4 (ENSOTSG00005002763) ENSOTSG00005002753 dvl2 (ENSOTSG00005002746) ENSOTSG00005002743 ponzr1 (ENSOTSG00005002742) ENSOTSG00005002729 ENSOTSG00005002719 ENSOTSG00005002704 Coho salmon MODERN SPECIES 7 PPARGC1A (ENSOKIG00005023592) ENSOKIG00005023589 ENSOKIG00005023583 gba3 (ENSOKIG00005023578) ADGRA3 (ENSOKIG00005023469) ENSOKIG00005023401 KCNIP4 (ENSOKIG00005023368) sec24d (ENSOKIG00005018397) SYNPO2 (ENSOKIG00005018225) MYOZ2 (ENSOKIG00005018208) USP53 (ENSOKIG00005018165) PTPRD (ENSOKIG00005017112) TYRP1 (ENSOKIG00005016952) LURAP1L (ENSOKIG00005016940) MPDZ (ENSOKIG00005010909) ADGRL3 (ENSOKIG00005006122) ##22 ENSOKIG00005005786 ENSOKIG00005005518 ENSOKIG00005005458 ENSOKIG00005005451 ENSOKIG00005005445 ENSOKIG00005005442 SLC16A13 (ENSOKIG00005005433) acap1 (ENSOKIG00005005394) agfg2 (ENSOKIG00005005355) ENSOKIG00005005344 si:ch73-335l21.4 (ENSOKIG00005005335) dvl2 (ENSOKIG00005005303) ENSOKIG00005005280 ENSOKIG00005005274 ponzr1 (ENSOKIG00005005264) Rainbow trout MODERN SPECIES 30 ADGRA3 (ENSOMYG00000045348) ENSOMYG00000045316 KCNIP4 (ENSOMYG00000045307) sec24d (ENSOMYG00000044726) ENSOMYG00000044658 MYOZ2 (ENSOMYG00000044655) USP53 (ENSOMYG00000044651) ENSOMYG00000076736 ENSOMYG00000050015 PTPRD (ENSOMYG00000029183) ENSOMYG00000025863 TYRP1 (ENSOMYG00000025839) LURAP1L (ENSOMYG00000025827) MPDZ (ENSOMYG00000022089) ENSOMYG00000075032 ENSOMYG00000013446 ##22 ENSOMYG00000012761 ENSOMYG00000012701 ENSOMYG00000074378 ENSOMYG00000052636 ENSOMYG00000012672 ENSOMYG00000012661 acap1 (ENSOMYG00000010288) agfg2 (ENSOMYG00000009492) ENSOMYG00000009460 si:ch73-335l21.4 (ENSOMYG00000009419) dvl2 (ENSOMYG00000009408) ENSOMYG00000009372 ENSOMYG00000009340 ponzr1 (ENSOMYG00000009316) ENSOMYG00000056354 Huchen MODERN SPECIES 412 ENSHHUG00000014088 ##22 ENSHHUG00000015197 ENSHHUG00000016131 ENSHHUG00000016161 BCL6B (ENSHHUG00000016168) SLC16A13 (ENSHHUG00000016192) acap1 (ENSHHUG00000016201) agfg2 (ENSHHUG00000016247) ENSHHUG00000016288 si:ch73-335l21.4 (ENSHHUG00000016299) dvl2 (ENSHHUG00000016309) ENSHHUG00000016421 ponzr1 (ENSHHUG00000016423) ENSHHUG00000016432 Salmoninae ANCESTRAL SPECIES 2113 ENSGT00940000156348.B.j ENSGT00940000155527.j.a.f ##22 Huchen MODERN SPECIES 279 PTPRD (ENSHHUG00000030699) TYRP1 (ENSHHUG00000030797) LURAP1L (ENSHHUG00000030809) MPDZ (ENSHHUG00000030827) ENSHHUG00000031095 ENSHHUG00000031104 ENSHHUG00000031109 ##22 Osteoglossiformes ANCESTRAL SPECIES 60 ENSGT00950000183054.a.a.a.a ENSGT00950000183027.b.b ENSGT00940000156337.c ENSGT00800000124172.i ENSGT00940000160640 ENSGT00940000156823.e.g ENSGT00510000047770.c.b ENSGT00940000156823.e.h.b ENSGT00390000017010 ENSGT00940000153617.D ENSGT00940000155804.k.a ENSGT00530000063790.b.g ENSGT00940000155586.B ENSGT00940000159617.b ENSGT00390000017890.b.b ENSGT00940000155527.j.a ##22 ENSGT00940000154658.a ENSGT00950000182886.a.b Asian bonytongue MODERN SPECIES 20 DTX4 (ENSSFOG00015031699) coro1b (ENSSFOG00015012799) ENSSFOG00015025322 ACY3 (ENSSFOG00015012691) cldnd1a (ENSSFOG00015012670) ENSSFOG00015030155 ENSSFOG00015033008 ENSSFOG00015017277 CPZ (ENSSFOG00015017288) GPR78 (ENSSFOG00015017342) trmt44 (ENSSFOG00015017345) acox3 (ENSSFOG00015017377) ENSSFOG00015017448 ENSSFOG00015017481 DCTN6 (ENSSFOG00015017515) ADGRL3 (ENSSFOG00015017590) ##22 ENSSFOG00015032438 ENSSFOG00015030930 ENSSFOG00015017865 ENSSFOG00015017941 MPDZ (ENSSFOG00015018045) LURAP1L (ENSSFOG00015031107) TYRP1 (ENSSFOG00015018063) PTPRD (ENSSFOG00015018170) CAAP1 (ENSSFOG00015030065) elavl2 (ENSSFOG00015027679) DMRTA1 (ENSSFOG00015029453) FABP2 (ENSSFOG00015029809) ENSSFOG00015029766 USP53 (ENSSFOG00015018293) myoz2a (ENSSFOG00015018331) P. kingsleyae MODERN SPECIES 93 ENSPKIG00000006307 DMRTA1 (ENSPKIG00000006264) ENSPKIG00000006226 ELAVL2 (ENSPKIG00000006187) CAAP1 (ENSPKIG00000006115) PTPRD (ENSPKIG00000006054) TYRP1 (ENSPKIG00000006008) LURAP1L (ENSPKIG00000006002) ENSPKIG00000005990 ENSPKIG00000005955 ENSPKIG00000005930 ADGRL3 (ENSPKIG00000005620) ##22 ENSPKIG00000005072 ENSPKIG00000004882 DCTN6 (ENSPKIG00000004859) ENSPKIG00000004836 gtf2e2 (ENSPKIG00000004797) ENSPKIG00000004761 HTRA3 (ENSPKIG00000004725) acox3 (ENSPKIG00000004695) trmt44 (ENSPKIG00000004663) GPR78 (ENSPKIG00000004649) CPZ (ENSPKIG00000004602) hmx4 (ENSPKIG00000004560) hmx1 (ENSPKIG00000004577) ADRA2C (ENSPKIG00000004535) HGFAC (ENSPKIG00000004495) Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Percomorphaceae_C ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Eupercaria ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Ballan wrasse MODERN SPECIES 283 PTPRD (ENSLBEG00000015424) TYRP1 (ENSLBEG00000015523) LURAP1L (ENSLBEG00000015547) ENSLBEG00000015565 ENSLBEG00000015614 ENSLBEG00000015655 ENSLBEG00000015684 ENSLBEG00000015725 ENSLBEG00000015775 ##22 ENSLBEG00000015803 Protacanthopterygii ANCESTRAL SPECIES 547 ENSGT00940000155527.i ##22 ENSGT00990000203806 Salmoninae ANCESTRAL SPECIES 1960 ENSGT00940000155527.i ##22 ENSGT00990000203806 Huchen MODERN SPECIES 9433 ENSHHUG00000039236 ##22 Salmoninae_a ANCESTRAL SPECIES 840 ENSGT00940000155527.i ##22 ENSGT00990000203806 Salmo ANCESTRAL SPECIES 687 ENSGT00940000155527.i ##22 ENSGT00990000203806 Atlantic salmon MODERN SPECIES 669 ENSSSAG00000086291 ##22 ENSSSAG00000116600 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Rainbow trout DUPLICATION Rainbow trout MODERN SPECIES 306 ENSOMYG00000058450 ##22 Rainbow trout MODERN SPECIES 182 ENSOMYG00000076978 ##22 ENSOMYG00000073461 #22 ENSOMYG00000076584 ENSOMYG00000057008 ENSOMYG00000076050 SMIM18 (ENSOMYG00000053319) gtf2e2 (ENSOMYG00000070860) ENSOMYG00000059637 ENSOMYG00000064747 ENSOMYG00000069257 ENSOMYG00000035779 ENSOMYG00000039760 #22 ENSOMYG00000059560 Otomorpha ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Otophysi ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Cyprininae ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Golden-line barbel MODERN SPECIES 2723 ENSSGRG00000011635 ##22 Clupeiformes ANCESTRAL SPECIES ENSGT00940000155527.i ##22 Denticle herring MODERN SPECIES 14 ENSDCDG00000010875 trmo (ENSDCDG00000010846) anp32b (ENSDCDG00000010827) coro2aa (ENSDCDG00000009914) hadh (ENSDCDG00000009873) cyp2u1 (ENSDCDG00000025568) ncapg (ENSDCDG00000025503) ENSDCDG00000025476 slit2 (ENSDCDG00000015357) ENSDCDG00000014993 ENSDCDG00000014992 ENSDCDG00000014990 ENSDCDG00000014989 ENSDCDG00000014987 ENSDCDG00000012784 #22 ENSDCDG00000012718 ##22 ENSDCDG00000012716 smim18 (ENSDCDG00000012713) gtf2e2 (ENSDCDG00000012709) FHIP1A (ENSDCDG00000012706) dctpp1 (ENSDCDG00000012705) gatb (ENSDCDG00000012096) ENSDCDG00000012049 FBXW7 (ENSDCDG00000010161) tmem154 (ENSDCDG00000010085) TMEM131L (ENSDCDG00000010061) mnd1 (ENSDCDG00000010031) trim2a (ENSDCDG00000008767) FHDC1 (ENSDCDG00000008683) arfip1 (ENSDCDG00000008645) sfrp2 (ENSDCDG00000008630) Spotted gar MODERN SPECIES 670 ENSLOCG00000013396 ptgr1.1 (ENSLOCG00000013391) txn (ENSLOCG00000013388) SVEP1 (ENSLOCG00000013366) ENSLOCG00000013359 ENSLOCG00000013356 ENSLOCG00000013352 ENSLOCG00000013350 smc2 (ENSLOCG00000013338) ecpas (ENSLOCG00000013324) kdm4c (ENSLOCG00000013308) PTPRD (ENSLOCG00000013272) TYRP1 (ENSLOCG00000013264) LURAP1L (ENSLOCG00000013262) MPDZ (ENSLOCG00000013247) ADGRL3 (ENSLOCG00000013236) #22 ENSLOCG00000013213 ENSLOCG00000013208 DCTN6 (ENSLOCG00000013206) RBPMS (ENSLOCG00000013199) gtf2e2 (ENSLOCG00000013191) ENSLOCG00000013178 pi4k2b (ENSLOCG00000013173) ENSLOCG00000013161 zcchc4 (ENSLOCG00000013153) pde5ab (ENSLOCG00000013138) ARSJ (ENSLOCG00000013135) camk2d1 (ENSLOCG00000013115) ANK2 (ENSLOCG00000013099) CLCN3 (ENSLOCG00000013089) hpf1 (ENSLOCG00000013083) Reedfish MODERN SPECIES 13 ENSECRG00000002879 tenm3 (ENSECRG00000002887) ENSECRG00000002892 ENSECRG00000002899 ENSECRG00000002907 aga (ENSECRG00000002913) BMPR1B (ENSECRG00000002928) pdlim5b (ENSECRG00000002952) ENSECRG00000002969 kcnv2b (ENSECRG00000002976) ints10 (ENSECRG00000002990) ENSECRG00000003004 vldlr (ENSECRG00000003060) gtf2e2 (ENSECRG00000003117) DCTN6 (ENSECRG00000003149) ADGRL3 (ENSECRG00000003173) #22 ENSECRG00000003191 ENSECRG00000003199 HPGDS (ENSECRG00000003206) atoh1a (ENSECRG00000003216) grid2 (ENSECRG00000003242) ENSECRG00000003274 cldne (ENSECRG00000003282) ENSECRG00000003291 ENSECRG00000003301 ENSECRG00000003313 SNCA (ENSECRG00000003319) ENSECRG00000003329 smim20 (ENSECRG00000003341) SEL1L3 (ENSECRG00000003357) ENSECRG00000003423