Vertebrata	DUPLICATION
Vertebrata	DUPLICATION
Vertebrata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a #20
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a.a #22
Euteleostomi	ANCESTRAL SPECIES	141														ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00390000005029	ENSGT00940000159518
Sarcopterygii	ANCESTRAL SPECIES	124														ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000155737.a.b ##36	ENSGT00940000157919 #37
Tetrapoda	ANCESTRAL SPECIES	39					ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Amniota	ANCESTRAL SPECIES	10	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Theria	ANCESTRAL SPECIES	26	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Eutheria	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Primates	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
Simiiformes	ANCESTRAL SPECIES	17	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00910000146943	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Hominidae	ANCESTRAL SPECIES	13	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00910000146943	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Human	MODERN SPECIES	1	SORCS1 (ENSG00000108018) #7	SORCS3 (ENSG00000156395) #8	CFAP58 (ENSG00000120051) #9	ITPRIP (ENSG00000148841) #10	GSTO2 (ENSG00000065621) #11	GSTO1 (ENSG00000148834) #12	CFAP43 (ENSG00000197748) #13	SFR1 (ENSG00000156384) #14	COL17A1 (ENSG00000065618) #15	SLK (ENSG00000065613) #16	STN1 (ENSG00000107960) #17	SH3PXD2A (ENSG00000107957) #18	NEURL1 (ENSG00000107954) #19	CALHM3 (ENSG00000183128) #20	CALHM1 (ENSG00000185933) #21	CALHM2 (ENSG00000138172) #22	PDCD11 (ENSG00000148843) #23	ATP5MK (ENSG00000173915) #24	TAF5 (ENSG00000148835) #25	PCGF6 (ENSG00000156374) #26	INA (ENSG00000148798) #27	RPEL1 (ENSG00000235376) #28	NT5C2 (ENSG00000076685) #29	CNNM2 (ENSG00000148842) #30	AS3MT (ENSG00000214435) #31	BORCS7 (ENSG00000166275) #32	CYP17A1 (ENSG00000148795) #33	WBP1L (ENSG00000166272) #34	SFXN2 (ENSG00000156398) #35	ARL3 (ENSG00000138175) #36	TRIM8 (ENSG00000171206) #37
Pan	ANCESTRAL SPECIES	16	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Bonobo	MODERN SPECIES	1	CFAP58 (ENSPPAG00000029617) #9	ITPRIP (ENSPPAG00000001710) #10	ENSPPAG00000011308	GSTO2 (ENSPPAG00000030499) #11	GSTO1 (ENSPPAG00000029433) #12	CFAP43 (ENSPPAG00000040294) #13	SFR1 (ENSPPAG00000037316) #14	ENSPPAG00000031577 #15	SLK (ENSPPAG00000043689) #16	STN1 (ENSPPAG00000030947) #17	SH3PXD2A (ENSPPAG00000040068) #18	ENSPPAG00000007628	ENSPPAG00000035559 #19	CALHM3 (ENSPPAG00000008882) #20	CALHM1 (ENSPPAG00000037598) #21	CALHM2 (ENSPPAG00000031003) #22	PDCD11 (ENSPPAG00000024593) #23	ATP5MK (ENSPPAG00000031402) #24	TAF5 (ENSPPAG00000038777) #25	ENSPPAG00000041879 #26	INA (ENSPPAG00000038377) #27	ENSPPAG00000032885 ##28	NT5C2 (ENSPPAG00000044029) #29	CNNM2 (ENSPPAG00000031457) #30	AS3MT (ENSPPAG00000040457) #31	ENSPPAG00000038677 #32	CYP17A1 (ENSPPAG00000033616) #33	WBP1L (ENSPPAG00000025524) #34	SFXN2 (ENSPPAG00000032477) #35	ARL3 (ENSPPAG00000034961) #36	TRIM8 (ENSPPAG00000030577) #37
Chimpanzee	MODERN SPECIES	1	CFAP58 (ENSPTRG00000002928) #9	ITPRIP (ENSPTRG00000049544) #10	ENSPTRG00000045459	GSTO2 (ENSPTRG00000002926) #11	GSTO1 (ENSPTRG00000002925) #12	CFAP43 (ENSPTRG00000002924) #13	SFR1 (ENSPTRG00000002922) #14	COL17A1 (ENSPTRG00000002921) #15	SLK (ENSPTRG00000002920) #16	STN1 (ENSPTRG00000002919) #17	SH3PXD2A (ENSPTRG00000047766) #18	ENSPTRG00000046888	NEURL1 (ENSPTRG00000049609) #19	CALHM3 (ENSPTRG00000002915) #20	CALHM1 (ENSPTRG00000002914) #21	CALHM2 (ENSPTRG00000002913) #22	PDCD11 (ENSPTRG00000002911) #23	ATP5MK (ENSPTRG00000002910) #24	TAF5 (ENSPTRG00000002909) #25	PCGF6 (ENSPTRG00000002908) #26	INA (ENSPTRG00000002907) #27	ENSPTRG00000043239 ##28	NT5C2 (ENSPTRG00000002905) #29	CNNM2 (ENSPTRG00000002904) #30	AS3MT (ENSPTRG00000033989) #31	ENSPTRG00000002902 #32	CYP17A1 (ENSPTRG00000002900) #33	WBP1L (ENSPTRG00000049387) #34	SFXN2 (ENSPTRG00000002898) #35	ARL3 (ENSPTRG00000045593) #36	TRIM8 (ENSPTRG00000002896) #37
Gorilla	MODERN SPECIES	1	SORCS3 (ENSGGOG00000034886) #8	CFAP58 (ENSGGOG00000010254) #9	ITPRIP (ENSGGOG00000036641) #10	ENSGGOG00000042801	GSTO2 (ENSGGOG00000000637) #11	GSTO1 (ENSGGOG00000005064) #12	CFAP43 (ENSGGOG00000000899) #13	SFR1 (ENSGGOG00000025713) #14	COL17A1 (ENSGGOG00000000510) #15	SLK (ENSGGOG00000026079) #16	STN1 (ENSGGOG00000008979) #17	SH3PXD2A (ENSGGOG00000037810) #18	NEURL1 (ENSGGOG00000011670) #19	CALHM3 (ENSGGOG00000011662) #20	CALHM1 (ENSGGOG00000011656) #21	CALHM2 (ENSGGOG00000011652) #22	PDCD11 (ENSGGOG00000011621) #23	ENSGGOG00000037876 #24	ENSGGOG00000011616 #24	ENSGGOG00000005443 #25	ENSGGOG00000014657 #26	INA (ENSGGOG00000002914) #27	ENSGGOG00000023942 ##28	ENSGGOG00000037824 ##28	NT5C2 (ENSGGOG00000013257) #29	CNNM2 (ENSGGOG00000013254) #30	ENSGGOG00000016551 #31	BORCS7 (ENSGGOG00000027277) #32	CYP17A1 (ENSGGOG00000012438) #33	WBP1L (ENSGGOG00000006632) #34	SFXN2 (ENSGGOG00000009385) #35
Orangutan	MODERN SPECIES	1	SORCS1 (ENSPPYG00000002638) #7	SORCS3 (ENSPPYG00000002637) #8	CFAP58 (ENSPPYG00000002636) #9	ITPRIP (ENSPPYG00000002635) #10	ENSPPYG00000033066 #11	GSTO1 (ENSPPYG00000002634) #12	CFAP43 (ENSPPYG00000002632) #13	SFR1 (ENSPPYG00000002631) #14	COL17A1 (ENSPPYG00000002630) #15	SLK (ENSPPYG00000002629) #16	STN1 (ENSPPYG00000002628) #17	SH3PXD2A (ENSPPYG00000002627) #18	NEURL1 (ENSPPYG00000002626) #19	ENSPPYG00000002625 #20	CALHM1 (ENSPPYG00000002624) #21	CALHM2 (ENSPPYG00000002623) #22	PDCD11 (ENSPPYG00000002621) #23	ENSPPYG00000002620 #24	TAF5 (ENSPPYG00000002619) #25	PCGF6 (ENSPPYG00000002618) #26	ENSPPYG00000040925	INA (ENSPPYG00000002617) #27	ENSPPYG00000031986 ##28	ENSPPYG00000007794	NT5C2 (ENSPPYG00000002616) #29	CNNM2 (ENSPPYG00000002615) #30	AS3MT (ENSPPYG00000002614) #31	BORCS7 (ENSPPYG00000002613) #32	CYP17A1 (ENSPPYG00000002611) #33	ENSPPYG00000041191	WBP1L (ENSPPYG00000002610) #34
Gibbon	MODERN SPECIES	18	ENSNLEG00000018193	CFAP58 (ENSNLEG00000015366) #9	ITPRIP (ENSNLEG00000026941) #10	ENSNLEG00000015364	GSTO2 (ENSNLEG00000031495) #11	GSTO1 (ENSNLEG00000015358) #12	CFAP43 (ENSNLEG00000015332) #13	SFR1 (ENSNLEG00000028704) #14	COL17A1 (ENSNLEG00000015299) #15	SLK (ENSNLEG00000015288) #16	STN1 (ENSNLEG00000015282) #17	SH3PXD2A (ENSNLEG00000015269) #18	NEURL1 (ENSNLEG00000015266) #19	ENSNLEG00000028327 #20	CALHM1 (ENSNLEG00000015263) #21	CALHM2 (ENSNLEG00000015261) #22	PDCD11 (ENSNLEG00000026700) #23	ATP5MK (ENSNLEG00000032755) #24	TAF5 (ENSNLEG00000015245) #25	ENSNLEG00000033689 #26	INA (ENSNLEG00000015236) #27	ENSNLEG00000032264	NT5C2 (ENSNLEG00000015225) #29	CNNM2 (ENSNLEG00000015219) #30	AS3MT (ENSNLEG00000015217) #31	BORCS7 (ENSNLEG00000028788) #32	CYP17A1 (ENSNLEG00000015210) #33	WBP1L (ENSNLEG00000033256) #34	SFXN2 (ENSNLEG00000033903) #35	ARL3 (ENSNLEG00000015183) #36	TRIM8 (ENSNLEG00000015181) #37
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943	ENSGT00940000154418.a.a.i.b #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Vervet Monkey	MODERN SPECIES	28	SORCS1 (ENSCSAG00000005204) #7	SORCS3 (ENSCSAG00000005234) #8	CFAP58 (ENSCSAG00000005244) #9	ITPRIP (ENSCSAG00000018451) #10	GSTO2 (ENSCSAG00000005247) #11	ENSCSAG00000005249 #12	CFAP43 (ENSCSAG00000005256) #13	SFR1 (ENSCSAG00000005258) #14	COL17A1 (ENSCSAG00000005300) #15	SLK (ENSCSAG00000005313) #16	STN1 (ENSCSAG00000005318) #17	SH3PXD2A (ENSCSAG00000005326) #18	NEURL1 (ENSCSAG00000005330) #19	CALHM3 (ENSCSAG00000005334) #20	CALHM1 (ENSCSAG00000005337) #21	CALHM2 (ENSCSAG00000005340) #22	PDCD11 (ENSCSAG00000005346) #23	ATP5MK (ENSCSAG00000005353) #24	TAF5 (ENSCSAG00000005356) #25	PCGF6 (ENSCSAG00000005362) #26	INA (ENSCSAG00000005368) #27	ENSCSAG00000005374	NT5C2 (ENSCSAG00000005380) #29	CNNM2 (ENSCSAG00000005384) #30	AS3MT (ENSCSAG00000005391) #31	BORCS7 (ENSCSAG00000005395) #32	CYP17A1 (ENSCSAG00000005397) #33	ENSCSAG00000005399 #34	SFXN2 (ENSCSAG00000005403) #35	ARL3 (ENSCSAG00000005408) #36	TRIM8 (ENSCSAG00000005411) #37
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943.a	ENSGT00940000154418.a.a.i.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Macaca	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943.a	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT01100000263539.b.a.a.a.a.b.b.a.a.a	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37	ENSGT00390000009747
Rhesus	MODERN SPECIES	19	CFAP58 (ENSMMUG00000015339) #9	ITPRIP (ENSMMUG00000051949) #10	GSTO2 (ENSMMUG00000062166) #11	ENSMMUG00000057536	GSTO1 (ENSMMUG00000015334) #12	CFAP43 (ENSMMUG00000059603) #13	SFR1 (ENSMMUG00000044990) #14	COL17A1 (ENSMMUG00000015325) #15	SLK (ENSMMUG00000015324) #16	STN1 (ENSMMUG00000015323) #17	SH3PXD2A (ENSMMUG00000007067) #18	ENSMMUG00000058427	NEURL1 (ENSMMUG00000007064) #19	CALHM3 (ENSMMUG00000061162) #20	CALHM1 (ENSMMUG00000058129) #21	CALHM2 (ENSMMUG00000007061) #22	PDCD11 (ENSMMUG00000007058) #23	TAF5 (ENSMMUG00000011523) #25	PCGF6 (ENSMMUG00000008873) #26	INA (ENSMMUG00000008872) #27	NT5C2 (ENSMMUG00000003749) #29	CNNM2 (ENSMMUG00000003747) #30	AS3MT (ENSMMUG00000007662) #31	BORCS7 (ENSMMUG00000007660) #32	CYP17A1 (ENSMMUG00000017601) #33	SFXN2 (ENSMMUG00000052989) #34	ARL3 (ENSMMUG00000060039) #36	ENSMMUG00000047000	TRIM8 (ENSMMUG00000004394) #37	SUFU (ENSMMUG00000004396)	ACTR1A (ENSMMUG00000011949)
Crab-eating macaque	MODERN SPECIES	19	CFAP58 (ENSMFAG00000035977) #9	ITPRIP (ENSMFAG00000057374) #10	GSTO2 (ENSMFAG00000050681) #11	ENSMFAG00000061086	GSTO1 (ENSMFAG00000033599) #12	CFAP43 (ENSMFAG00000043638) #13	SFR1 (ENSMFAG00000033346) #14	COL17A1 (ENSMFAG00000038498) #15	SLK (ENSMFAG00000007328) #16	STN1 (ENSMFAG00000041817) #17	SH3PXD2A (ENSMFAG00000044985) #18	ENSMFAG00000030673	NEURL1 (ENSMFAG00000001140) #19	CALHM3 (ENSMFAG00000009610) #20	CALHM1 (ENSMFAG00000032380) #21	CALHM2 (ENSMFAG00000002974) #22	PDCD11 (ENSMFAG00000044058) #23	TAF5 (ENSMFAG00000031468) #25	PCGF6 (ENSMFAG00000001835) #26	INA (ENSMFAG00000040504) #27	NT5C2 (ENSMFAG00000035950) #29	AS3MT (ENSMFAG00000039839) #31	BORCS7 (ENSMFAG00000044610) #32	CYP17A1 (ENSMFAG00000002033) #33	WBP1L (ENSMFAG00000042677) #34	SFXN2 (ENSMFAG00000045149) #35	ARL3 (ENSMFAG00000057536) #36	TRIM8 (ENSMFAG00000046181) #37	SUFU (ENSMFAG00000038634)	ACTR1A (ENSMFAG00000041926)	MFSD13A (ENSMFAG00000041523)
Pig-tailed macaque	MODERN SPECIES	550	SORCS3 (ENSMNEG00000037703) #8	CFAP58 (ENSMNEG00000034236) #9	ENSMNEG00000026574	GSTO2 (ENSMNEG00000032666) #11	ENSMNEG00000031275 #12	CFAP43 (ENSMNEG00000041229) #13	SFR1 (ENSMNEG00000041579) #14	COL17A1 (ENSMNEG00000030047) #15	SLK (ENSMNEG00000032689) #16	STN1 (ENSMNEG00000031906) #17	SH3PXD2A (ENSMNEG00000031119) #18	ENSMNEG00000007571	NEURL1 (ENSMNEG00000037296) #19	CALHM3 (ENSMNEG00000028186) #20	CALHM1 (ENSMNEG00000030938) #21	CALHM2 (ENSMNEG00000011289) #22	PDCD11 (ENSMNEG00000040726) #23	ATP5MK (ENSMNEG00000035593) #24	TAF5 (ENSMNEG00000035603) #25	PCGF6 (ENSMNEG00000030820) #26	INA (ENSMNEG00000043059) #27	ENSMNEG00000027383	NT5C2 (ENSMNEG00000036765) #29	CNNM2 (ENSMNEG00000032018) #30	AS3MT (ENSMNEG00000036598) #31	BORCS7 (ENSMNEG00000037640) #32	CYP17A1 (ENSMNEG00000041088) #33	WBP1L (ENSMNEG00000017708) #34	SFXN2 (ENSMNEG00000032769) #35	ARL3 (ENSMNEG00000041783) #36	ENSMNEG00000020915
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
Olive baboon	MODERN SPECIES	2	CFAP58 (ENSPANG00000020883) #9	ITPRIP (ENSPANG00000020881) #10	GSTO2 (ENSPANG00000020880) #11	ENSPANG00000020878 #12	CFAP43 (ENSPANG00000020924) #13	SFR1 (ENSPANG00000020932) #14	ENSPANG00000043305	COL17A1 (ENSPANG00000020929) #15	SLK (ENSPANG00000020927) #16	STN1 (ENSPANG00000020926) #17	SH3PXD2A (ENSPANG00000020925) #18	ENSPANG00000043974	NEURL1 (ENSPANG00000020952) #19	CALHM3 (ENSPANG00000051037) #20	CALHM1 (ENSPANG00000020961) #21	CALHM2 (ENSPANG00000048513) #22	PDCD11 (ENSPANG00000020959) #23	ENSPANG00000034679 #24	TAF5 (ENSPANG00000020958) #25	PCGF6 (ENSPANG00000020957) #26	INA (ENSPANG00000020956) #27	NT5C2 (ENSPANG00000020954) #29	CNNM2 (ENSPANG00000020976) #30	AS3MT (ENSPANG00000020981) #31	BORCS7 (ENSPANG00000020979) #32	CYP17A1 (ENSPANG00000020982) #33	WBP1L (ENSPANG00000051243) #34	SFXN2 (ENSPANG00000020991) #35	ARL3 (ENSPANG00000033639) #36	TRIM8 (ENSPANG00000020989) #37	SUFU (ENSPANG00000020987)
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
Drill	MODERN SPECIES	660	SORCS3 (ENSMLEG00000038863) #8	CFAP58 (ENSMLEG00000039227) #9	ENSMLEG00000039989	ENSMLEG00000019788	GSTO2 (ENSMLEG00000039283) #11	GSTO1 (ENSMLEG00000042764) #12	CFAP43 (ENSMLEG00000028785) #13	SFR1 (ENSMLEG00000043379) #14	COL17A1 (ENSMLEG00000020402) #15	SLK (ENSMLEG00000023706) #16	STN1 (ENSMLEG00000040619) #17	SH3PXD2A (ENSMLEG00000030170) #18	NEURL1 (ENSMLEG00000037258) #19	CALHM3 (ENSMLEG00000035391) #20	CALHM1 (ENSMLEG00000028793) #21	CALHM2 (ENSMLEG00000029707) #22	PDCD11 (ENSMLEG00000040978) #23	ATP5MK (ENSMLEG00000027736) #24	TAF5 (ENSMLEG00000029550) #25	PCGF6 (ENSMLEG00000038894) #26	ENSMLEG00000036796	NT5C2 (ENSMLEG00000040980) #29	ENSMLEG00000004885 #30	AS3MT (ENSMLEG00000029524) #31	BORCS7 (ENSMLEG00000031380) #32	CYP17A1 (ENSMLEG00000043505) #33	WBP1L (ENSMLEG00000039529) #34	SFXN2 (ENSMLEG00000028110) #35	ARL3 (ENSMLEG00000037047) #36	ENSMLEG00000021573	TRIM8 (ENSMLEG00000039981) #37
Sooty mangabey	MODERN SPECIES	598	CFAP58 (ENSCATG00000038482) #9	ENSCATG00000044126	ENSCATG00000038057	GSTO2 (ENSCATG00000033970) #11	GSTO1 (ENSCATG00000020176) #12	CFAP43 (ENSCATG00000030702) #13	SFR1 (ENSCATG00000029645) #14	COL17A1 (ENSCATG00000043526) #15	SLK (ENSCATG00000031756) #16	STN1 (ENSCATG00000043103) #17	SH3PXD2A (ENSCATG00000028223) #18	ENSCATG00000009792	NEURL1 (ENSCATG00000041066) #19	CALHM3 (ENSCATG00000034360) #20	CALHM1 (ENSCATG00000044820) #21	CALHM2 (ENSCATG00000041923) #22	PDCD11 (ENSCATG00000044331) #23	ATP5MK (ENSCATG00000039772) #24	TAF5 (ENSCATG00000038549) #25	PCGF6 (ENSCATG00000041896) #26	INA (ENSCATG00000038727) #27	NT5C2 (ENSCATG00000030773) #29	CNNM2 (ENSCATG00000041464) #30	AS3MT (ENSCATG00000037118) #31	BORCS7 (ENSCATG00000035080) #32	CYP17A1 (ENSCATG00000041371) #33	WBP1L (ENSCATG00000041061) #34	SFXN2 (ENSCATG00000035934) #35	ARL3 (ENSCATG00000019333) #36	TRIM8 (ENSCATG00000033750) #37	SUFU (ENSCATG00000039824)
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c.a #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.i.b #27	ENSGT00910000146943	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Golden snub-nosed monkey	MODERN SPECIES	3053				CFAP58 (ENSRROG00000044074) #9	GSTO2 (ENSRROG00000036386) #11	ENSRROG00000031846 #12	CFAP43 (ENSRROG00000032126) #13	SFR1 (ENSRROG00000024116) #14	COL17A1 (ENSRROG00000031066) #15	SLK (ENSRROG00000039991) #16	STN1 (ENSRROG00000013903) #17	SH3PXD2A (ENSRROG00000044760) #18	NEURL1 (ENSRROG00000042825) #19	CALHM3 (ENSRROG00000010205) #20	CALHM1 (ENSRROG00000011380) #21	CALHM2 (ENSRROG00000039430) #22	PDCD11 (ENSRROG00000030483) #23	ENSRROG00000043783 #24	TAF5 (ENSRROG00000040494) #25	PCGF6 (ENSRROG00000030643) #26	ENSRROG00000027343	INA (ENSRROG00000044855) #27	NT5C2 (ENSRROG00000040128) #29	CNNM2 (ENSRROG00000041690) #30	AS3MT (ENSRROG00000030773) #31	BORCS7 (ENSRROG00000030916) #32	CYP17A1 (ENSRROG00000039877) #33	WBP1L (ENSRROG00000035869) #34	SFXN2 (ENSRROG00000028643) #35	ARL3 (ENSRROG00000030757) #36	TRIM8 (ENSRROG00000030582) #37
Black snub-nosed monkey	MODERN SPECIES	1538	ENSRBIG00000033505	SORCS3 (ENSRBIG00000033222) #8	CFAP58 (ENSRBIG00000041485) #9	GSTO2 (ENSRBIG00000040325) #11	ENSRBIG00000034994 #12	CFAP43 (ENSRBIG00000033041) #13	SFR1 (ENSRBIG00000043888) #14	COL17A1 (ENSRBIG00000018038) #15	SLK (ENSRBIG00000037221) #16	STN1 (ENSRBIG00000039819) #17	SH3PXD2A (ENSRBIG00000033834) #18	ENSRBIG00000044735	NEURL1 (ENSRBIG00000032145) #19	CALHM3 (ENSRBIG00000030795) #20	CALHM1 (ENSRBIG00000029567) #21	CALHM2 (ENSRBIG00000032217) #22	PDCD11 (ENSRBIG00000011889) #23	ENSRBIG00000030165 #24	TAF5 (ENSRBIG00000043209) #25	PCGF6 (ENSRBIG00000034630) #26	ENSRBIG00000042921 #27	NT5C2 (ENSRBIG00000044011) #29	CNNM2 (ENSRBIG00000037414) #30	AS3MT (ENSRBIG00000038013) #31	BORCS7 (ENSRBIG00000043045) #32	CYP17A1 (ENSRBIG00000041280) #33	WBP1L (ENSRBIG00000028283) #34	SFXN2 (ENSRBIG00000041623) #35	ARL3 (ENSRBIG00000031934) #36	TRIM8 (ENSRBIG00000032947) #37	SUFU (ENSRBIG00000041782)
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00910000146943.c	ENSGT00940000154418.a.a.h.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Cebidae	ANCESTRAL SPECIES	17	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Marmoset	MODERN SPECIES	3	CFAP58 (ENSCJAG00000018501) #9	ITPRIP (ENSCJAG00000018498) #10	GSTO2 (ENSCJAG00000018486) #11	ENSCJAG00000018474 #12	CFAP43 (ENSCJAG00000018443) #13	SFR1 (ENSCJAG00000018436) #14	ENSCJAG00000079409	COL17A1 (ENSCJAG00000018404) #15	SLK (ENSCJAG00000018363) #16	ENSCJAG00000076134	STN1 (ENSCJAG00000040388) #17	SH3PXD2A (ENSCJAG00000018307) #18	NEURL1 (ENSCJAG00000047912) #19	CALHM3 (ENSCJAG00000018295) #20	CALHM1 (ENSCJAG00000018294) #21	CALHM2 (ENSCJAG00000018290) #22	PDCD11 (ENSCJAG00000018257) #23	ENSCJAG00000018253 #24	TAF5 (ENSCJAG00000018213) #25	INA (ENSCJAG00000018178) #27	PCGF6 (ENSCJAG00000018192) #26	NT5C2 (ENSCJAG00000018148) #29	CNNM2 (ENSCJAG00000018118) #30	BORCS7 (ENSCJAG00000039007) #32	CYP17A1 (ENSCJAG00000018089) #33	WBP1L (ENSCJAG00000046138) #34	SFXN2 (ENSCJAG00000018068) #35	ARL3 (ENSCJAG00000040244) #36	TRIM8 (ENSCJAG00000018057) #37	ENSCJAG00000078286	SUFU (ENSCJAG00000018029)
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Bolivian squirrel monkey	MODERN SPECIES	47	ENSSBOG00000029669	SORCS1 (ENSSBOG00000030010) #7	SORCS3 (ENSSBOG00000014957) #8	CFAP58 (ENSSBOG00000020254) #9	ITPRIP (ENSSBOG00000012140) #10	GSTO2 (ENSSBOG00000034665) #11	GSTO1 (ENSSBOG00000020871) #12	CFAP43 (ENSSBOG00000027311) #13	COL17A1 (ENSSBOG00000032158) #15	SLK (ENSSBOG00000027292) #16	STN1 (ENSSBOG00000031516) #17	SH3PXD2A (ENSSBOG00000028219) #18	NEURL1 (ENSSBOG00000028649) #19	CALHM3 (ENSSBOG00000024427) #20	CALHM1 (ENSSBOG00000027301) #21	CALHM2 (ENSSBOG00000030532) #22	PDCD11 (ENSSBOG00000030308) #23	ATP5MK (ENSSBOG00000030019) #24	TAF5 (ENSSBOG00000020350) #25	PCGF6 (ENSSBOG00000021501) #26	INA (ENSSBOG00000020360) #27	NT5C2 (ENSSBOG00000020827) #29	CNNM2 (ENSSBOG00000030131) #30	ENSSBOG00000031782	AS3MT (ENSSBOG00000033111) #31	BORCS7 (ENSSBOG00000031523) #32	CYP17A1 (ENSSBOG00000020558) #33	WBP1L (ENSSBOG00000009511) #34	SFXN2 (ENSSBOG00000026232) #35	ARL3 (ENSSBOG00000030806) #36	TRIM8 (ENSSBOG00000024105) #37
Capuchin	MODERN SPECIES	71										SLK (ENSCCAG00000000586) #16	STN1 (ENSCCAG00000020507) #17	SH3PXD2A (ENSCCAG00000028177) #18	NEURL1 (ENSCCAG00000029247) #19	CALHM3 (ENSCCAG00000034201) #20	CALHM1 (ENSCCAG00000011595) #21	CALHM2 (ENSCCAG00000023950) #22	PDCD11 (ENSCCAG00000018950) #23	ENSCCAG00000019694 #24	TAF5 (ENSCCAG00000025917) #25	PCGF6 (ENSCCAG00000037838) #26	ENSCCAG00000026135	INA (ENSCCAG00000022073) #27	ENSCCAG00000032845	NT5C2 (ENSCCAG00000026539) #29	CNNM2 (ENSCCAG00000023803) #30	AS3MT (ENSCCAG00000020106) #31	BORCS7 (ENSCCAG00000033857) #32	ENSCCAG00000035022	CYP17A1 (ENSCCAG00000022170) #33	WBP1L (ENSCCAG00000001078) #34	SFXN2 (ENSCCAG00000034586) #35
Mas night monkey	MODERN SPECIES	658	ITPRIP (ENSANAG00000034870) #10	GSTO2 (ENSANAG00000034517) #11	GSTO1 (ENSANAG00000033006) #12	CFAP43 (ENSANAG00000032094) #13	SFR1 (ENSANAG00000031275) #14	ENSANAG00000030939	COL17A1 (ENSANAG00000027237) #15	ENSANAG00000026163	SLK (ENSANAG00000020590) #16	ENSANAG00000038444	STN1 (ENSANAG00000038147) #17	SH3PXD2A (ENSANAG00000037670) #18	NEURL1 (ENSANAG00000037067) #19	CALHM3 (ENSANAG00000032187) #20	CALHM1 (ENSANAG00000032120) #21	CALHM2 (ENSANAG00000027035) #22	PDCD11 (ENSANAG00000034576) #23	ATP5MK (ENSANAG00000033958) #24	TAF5 (ENSANAG00000033631) #25	PCGF6 (ENSANAG00000028199) #26	ENSANAG00000027437	ENSANAG00000027873 #27	NT5C2 (ENSANAG00000024718) #29	CNNM2 (ENSANAG00000020034) #30	AS3MT (ENSANAG00000038067) #31	ENSANAG00000037880 #32	CYP17A1 (ENSANAG00000022241) #33	WBP1L (ENSANAG00000034043) #34	SFXN2 (ENSANAG00000031917) #35	ARL3 (ENSANAG00000027007) #36	ENSANAG00000026371
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849.c #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mouse lemur	MODERN SPECIES	6	XPNPEP1 (ENSMICG00000006830)	SORCS1 (ENSMICG00000007006) #7	SORCS3 (ENSMICG00000016273) #8	CFAP58 (ENSMICG00000016245) #9	GSTO2 (ENSMICG00000016220) #11	GSTO1 (ENSMICG00000026906) #12	CFAP43 (ENSMICG00000004417) #13	SFR1 (ENSMICG00000037306) #14	COL17A1 (ENSMICG00000004394) #15	SLK (ENSMICG00000004384) #16	STN1 (ENSMICG00000012547) #17	SH3PXD2A (ENSMICG00000012520) #18	NEURL1 (ENSMICG00000012507) #19	CALHM3 (ENSMICG00000041906) #20	CALHM1 (ENSMICG00000027967) #21	CALHM2 (ENSMICG00000012493) #22	PDCD11 (ENSMICG00000012421) #23	ATP5MK (ENSMICG00000012417) #24	TAF5 (ENSMICG00000012393) #25	PCGF6 (ENSMICG00000034497) #26	INA (ENSMICG00000000504) #27	ENSMICG00000012316 #29	CNNM2 (ENSMICG00000012298) #30	AS3MT (ENSMICG00000012292) #31	ENSMICG00000047930 #32	CYP17A1 (ENSMICG00000012275) #33	WBP1L (ENSMICG00000012267) #34	SFXN2 (ENSMICG00000012256) #35	ARL3 (ENSMICG00000012249) #36	TRIM8 (ENSMICG00000031109) #37	SUFU (ENSMICG00000012221)
Lemuriformes_a	ANCESTRAL SPECIES	21	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849.c #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Coquerels sifaka	MODERN SPECIES	870			SORCS1 (ENSPCOG00000024071) #7	SORCS3 (ENSPCOG00000019728) #8	CFAP58 (ENSPCOG00000014925) #9	GSTO2 (ENSPCOG00000014365) #11	CFAP43 (ENSPCOG00000023452) #13	SFR1 (ENSPCOG00000024305) #14	COL17A1 (ENSPCOG00000016202) #15	SLK (ENSPCOG00000016155) #16	STN1 (ENSPCOG00000017648) #17	SH3PXD2A (ENSPCOG00000015981) #18	NEURL1 (ENSPCOG00000015128) #19	CALHM3 (ENSPCOG00000025456) #20	CALHM1 (ENSPCOG00000015513) #21	CALHM2 (ENSPCOG00000017708) #22	PDCD11 (ENSPCOG00000023327) #23	ATP5MK (ENSPCOG00000023807) #24	TAF5 (ENSPCOG00000002819) #25	PCGF6 (ENSPCOG00000027010) #26	INA (ENSPCOG00000028040) #27	NT5C2 (ENSPCOG00000015418) #29	CNNM2 (ENSPCOG00000017458) #30	AS3MT (ENSPCOG00000019900) #31	ENSPCOG00000014724 #32	CYP17A1 (ENSPCOG00000003691) #33	WBP1L (ENSPCOG00000020010) #34	SFXN2 (ENSPCOG00000024349) #35	ARL3 (ENSPCOG00000024271) #36	TRIM8 (ENSPCOG00000001337) #37	SUFU (ENSPCOG00000015700)
Greater bamboo lemur	MODERN SPECIES	194	ENSPSMG00000013000	SORCS3 (ENSPSMG00000012981) #8	CFAP58 (ENSPSMG00000012943) #9	ITPRIP (ENSPSMG00000012904) #10	GSTO2 (ENSPSMG00000012899) #11	GSTO1 (ENSPSMG00000012842) #12	CFAP43 (ENSPSMG00000012803) #13	SFR1 (ENSPSMG00000012770) #14	COL17A1 (ENSPSMG00000012758) #15	SLK (ENSPSMG00000012717) #16	STN1 (ENSPSMG00000012647) #17	SH3PXD2A (ENSPSMG00000012614) #18	NEURL1 (ENSPSMG00000012575) #19	CALHM3 (ENSPSMG00000012562) #20	CALHM1 (ENSPSMG00000012549) #21	CALHM2 (ENSPSMG00000012544) #22	PDCD11 (ENSPSMG00000012508) #23	ATP5MK (ENSPSMG00000012393) #24	TAF5 (ENSPSMG00000012382) #25	PCGF6 (ENSPSMG00000012356) #26	INA (ENSPSMG00000012332) #27	ENSPSMG00000012304	ENSPSMG00000012219	CNNM2 (ENSPSMG00000012210) #30	AS3MT (ENSPSMG00000012188) #31	BORCS7 (ENSPSMG00000012149) #32	CYP17A1 (ENSPSMG00000012142) #33	WBP1L (ENSPSMG00000012116) #34	SFXN2 (ENSPSMG00000012074) #35	ARL3 (ENSPSMG00000012052) #36	TRIM8 (ENSPSMG00000012037) #37
Bushbaby	MODERN SPECIES	136	SORCS1 (ENSOGAG00000007257) #7	SORCS3 (ENSOGAG00000016699) #8	CFAP58 (ENSOGAG00000016440) #9	ITPRIP (ENSOGAG00000028677) #10	GSTO2 (ENSOGAG00000016437) #11	GSTO1 (ENSOGAG00000016045) #12	CFAP43 (ENSOGAG00000017132) #13	COL17A1 (ENSOGAG00000017124) #15	SLK (ENSOGAG00000017119) #16	STN1 (ENSOGAG00000008722) #17	SH3PXD2A (ENSOGAG00000008718) #18	NEURL1 (ENSOGAG00000008711) #19	ENSOGAG00000025475	CALHM3 (ENSOGAG00000008708) #20	CALHM1 (ENSOGAG00000032146) #21	CALHM2 (ENSOGAG00000008704) #22	PDCD11 (ENSOGAG00000008683) #23	TAF5 (ENSOGAG00000008680) #25	PCGF6 (ENSOGAG00000017097) #26	INA (ENSOGAG00000029454) #27	ENSOGAG00000004346	CNNM2 (ENSOGAG00000004343) #30	AS3MT (ENSOGAG00000004341) #31	BORCS7 (ENSOGAG00000032692) #32	CYP17A1 (ENSOGAG00000013530) #33	WBP1L (ENSOGAG00000003309) #34	SFXN2 (ENSOGAG00000003633) #35	ARL3 (ENSOGAG00000003631) #36	TRIM8 (ENSOGAG00000003628) #37	SUFU (ENSOGAG00000004840)	ENSOGAG00000002647
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Tree shrew	MODERN SPECIES	2418												SH3PXD2A (ENSTBEG00000006182) #18	NEURL1 (ENSTBEG00000005609) #19	CALHM3 (ENSTBEG00000004807) #20	ENSTBEG00000004679 #21	CALHM2 (ENSTBEG00000004568) #22	ENSTBEG00000004295	PDCD11 (ENSTBEG00000001893) #23	ATP5MK (ENSTBEG00000001645) #24	TAF5 (ENSTBEG00000000500) #25
Glires	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Rabbit	MODERN SPECIES	9	CFAP58 (ENSOCUG00000008719) #9	ITPRIP (ENSOCUG00000008713) #10	GSTO2 (ENSOCUG00000008708) #11	GSTO1 (ENSOCUG00000008702) #12	CFAP43 (ENSOCUG00000008688) #13	SFR1 (ENSOCUG00000012794) #14	COL17A1 (ENSOCUG00000003049) #15	SLK (ENSOCUG00000003035) #16	ENSOCUG00000038741	STN1 (ENSOCUG00000003028) #17	ENSOCUG00000037086	SH3PXD2A (ENSOCUG00000013769) #18	NEURL1 (ENSOCUG00000013760) #19	CALHM3 (ENSOCUG00000025668) #20	CALHM1 (ENSOCUG00000027986) #21	CALHM2 (ENSOCUG00000006336) #22	PDCD11 (ENSOCUG00000006312) #23	ENSOCUG00000033131 #24	TAF5 (ENSOCUG00000006303) #25	PCGF6 (ENSOCUG00000012441) #26	INA (ENSOCUG00000004969) #27	ENSOCUG00000009107	CNNM2 (ENSOCUG00000009098) #30	AS3MT (ENSOCUG00000000626) #31	ENSOCUG00000037788 #32	ENSOCUG00000023839	CYP17A1 (ENSOCUG00000017790) #33	WBP1L (ENSOCUG00000021890) #34	SFXN2 (ENSOCUG00000025541) #35	ARL3 (ENSOCUG00000005792) #36	TRIM8 (ENSOCUG00000005786) #37
Pika	MODERN SPECIES	2102					GSTO2 (ENSOPRG00000010910) #11	GSTO1 (ENSOPRG00000010894) #12	CFAP43 (ENSOPRG00000010835) #13	SFR1 (ENSOPRG00000010818) #14	COL17A1 (ENSOPRG00000010749) #15	SLK (ENSOPRG00000010724) #16	STN1 (ENSOPRG00000010707) #17	SH3PXD2A (ENSOPRG00000010687) #18	NEURL1 (ENSOPRG00000010668) #19	CALHM3 (ENSOPRG00000010659) #20	CALHM1 (ENSOPRG00000010656) #21	CALHM2 (ENSOPRG00000010654) #22	PDCD11 (ENSOPRG00000010593) #23	ATP5MK (ENSOPRG00000010588) #24	ENSOPRG00000010551 #25
Rodentia	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Sciuridae	ANCESTRAL SPECIES	21	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Marmotini	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Marmotini_b	ANCESTRAL SPECIES	76		ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Arctic ground squirrel	MODERN SPECIES	239		SORCS3 (ENSUPAG00010020130) #8	CFAP58 (ENSUPAG00010020153) #9	ITPRIP (ENSUPAG00010020162) #10	GSTO2 (ENSUPAG00010020166) #11	GSTO1 (ENSUPAG00010020173) #12	ENSUPAG00010020178 #13	SFR1 (ENSUPAG00010020181) #14	COL17A1 (ENSUPAG00010020186) #15	SLK (ENSUPAG00010020310) #16	STN1 (ENSUPAG00010020348) #17	SH3PXD2A (ENSUPAG00010020358) #18	NEURL1 (ENSUPAG00010020402) #19	CALHM3 (ENSUPAG00010020411) #20	CALHM1 (ENSUPAG00010020414) #21	CALHM2 (ENSUPAG00010020415) #22	PDCD11 (ENSUPAG00010020419) #23	ATP5MK (ENSUPAG00010020448) #24	TAF5 (ENSUPAG00010020451) #25	PCGF6 (ENSUPAG00010020458) #26	INA (ENSUPAG00010020463) #27	NT5C2 (ENSUPAG00010020468) #29	CNNM2 (ENSUPAG00010020490) #30	AS3MT (ENSUPAG00010020500) #31	BORCS7 (ENSUPAG00010020508) #32	CYP17A1 (ENSUPAG00010020514) #33	WBP1L (ENSUPAG00010020520) #34	SFXN2 (ENSUPAG00010020522) #35	ARL3 (ENSUPAG00010020532) #36	TRIM8 (ENSUPAG00010020545) #37	SUFU (ENSUPAG00010020560)
Squirrel	MODERN SPECIES	200		SORCS3 (ENSSTOG00000015559) #8	CFAP58 (ENSSTOG00000004618) #9	ITPRIP (ENSSTOG00000020489) #10	GSTO2 (ENSSTOG00000013405) #11	GSTO1 (ENSSTOG00000013401) #12	ENSSTOG00000013381 #13	SFR1 (ENSSTOG00000013376) #14	COL17A1 (ENSSTOG00000013352) #15	SLK (ENSSTOG00000013329) #16	STN1 (ENSSTOG00000011905) #17	SH3PXD2A (ENSSTOG00000007057) #18	NEURL1 (ENSSTOG00000023895) #19	CALHM3 (ENSSTOG00000025172) #20	CALHM1 (ENSSTOG00000014605) #21	CALHM2 (ENSSTOG00000014597) #22	PDCD11 (ENSSTOG00000014553) #23	ATP5MK (ENSSTOG00000029901) #24	TAF5 (ENSSTOG00000014536) #25	PCGF6 (ENSSTOG00000014511) #26	INA (ENSSTOG00000026141) #27	ENSSTOG00000012380	CNNM2 (ENSSTOG00000014497) #30	AS3MT (ENSSTOG00000014490) #31	BORCS7 (ENSSTOG00000019613) #32	CYP17A1 (ENSSTOG00000014469) #33	ENSSTOG00000026185 #34	SFXN2 (ENSSTOG00000014456) #35	ARL3 (ENSSTOG00000014453) #36	TRIM8 (ENSSTOG00000008270) #37	SUFU (ENSSTOG00000026796)
Alpin marmot	MODERN SPECIES	39	SORCS3 (ENSMMMG00000001241) #8	CFAP58 (ENSMMMG00000001204) #9	ITPRIP (ENSMMMG00000001191) #10	GSTO2 (ENSMMMG00000001167) #11	GSTO1 (ENSMMMG00000001145) #12	ENSMMMG00000001103	CFAP43 (ENSMMMG00000000749) #13	SFR1 (ENSMMMG00000000727) #14	COL17A1 (ENSMMMG00000000492) #15	SLK (ENSMMMG00000000361) #16	STN1 (ENSMMMG00000000299) #17	SH3PXD2A (ENSMMMG00000000203) #18	NEURL1 (ENSMMMG00000000158) #19	CALHM3 (ENSMMMG00000000131) #20	CALHM1 (ENSMMMG00000000112) #21	CALHM2 (ENSMMMG00000000103) #22	PDCD11 (ENSMMMG00000000038) #23	ENSMMMG00000023417 #24	TAF5 (ENSMMMG00000023414) #25	ENSMMMG00000023410 #26	INA (ENSMMMG00000023409) #27	NT5C2 (ENSMMMG00000023399) #29	CNNM2 (ENSMMMG00000023389) #30	AS3MT (ENSMMMG00000023383) #31	BORCS7 (ENSMMMG00000023381) #32	CYP17A1 (ENSMMMG00000023378) #33	ENSMMMG00000023372 #34	SFXN2 (ENSMMMG00000023370) #35	ENSMMMG00000023361 #36	TRIM8 (ENSMMMG00000023360) #37	SUFU (ENSMMMG00000023355)
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005001899	ENSSVLG00005001943	SORCS1 (ENSSVLG00005002050) #7	SORCS3 (ENSSVLG00005002348) #8	CFAP58 (ENSSVLG00005002434) #9	ITPRIP (ENSSVLG00005002474) #10	CFAP43 (ENSSVLG00005002510) #13	ENSSVLG00005002622 #14	COL17A1 (ENSSVLG00005002694) #15	SLK (ENSSVLG00005002929) #16	STN1 (ENSSVLG00005002979) #17	ENSSVLG00005003038 #18	NEURL1 (ENSSVLG00005003109) #19	CALHM3 (ENSSVLG00005003127) #20	CALHM1 (ENSSVLG00005003146) #21	CALHM2 (ENSSVLG00005003154) #22	PDCD11 (ENSSVLG00005003201) #23	ENSSVLG00005003328	ENSSVLG00005003341 #24	TAF5 (ENSSVLG00005003365) #25	PCGF6 (ENSSVLG00005003419) #26	INA (ENSSVLG00005003457) #27	NT5C2 (ENSSVLG00005003493) #29	CNNM2 (ENSSVLG00005003556) #30	AS3MT (ENSSVLG00005003598) #31	BORCS7 (ENSSVLG00005003641) #32	CYP17A1 (ENSSVLG00005003699) #33	ENSSVLG00005003793 #34	SFXN2 (ENSSVLG00005003816) #35	ARL3 (ENSSVLG00005003847) #36	TRIM8 (ENSSVLG00005003874) #37
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000039825	SORCS3 (ENSHGLG00000001754) #8	CFAP58 (ENSHGLG00000002793) #9	ITPRIP (ENSHGLG00000046163) #10	GSTO2 (ENSHGLG00000049945) #11	GSTO1 (ENSHGLG00000002485) #12	CFAP43 (ENSHGLG00000035856) #13	ENSHGLG00000033849 #14	COL17A1 (ENSHGLG00000003598) #15	SLK (ENSHGLG00000003084) #16	STN1 (ENSHGLG00000002775) #17	SH3PXD2A (ENSHGLG00000002064) #18	NEURL1 (ENSHGLG00000001530) #19	CALHM3 (ENSHGLG00000002195) #20	CALHM1 (ENSHGLG00000002126) #21	CALHM2 (ENSHGLG00000002007) #22	PDCD11 (ENSHGLG00000001462) #23	ENSHGLG00000045467	ENSHGLG00000003034	TAF5 (ENSHGLG00000002753) #25	ENSHGLG00000002539 #26	INA (ENSHGLG00000002478) #27	NT5C2 (ENSHGLG00000003370) #29	CNNM2 (ENSHGLG00000002477) #30	ENSHGLG00000037786	ENSHGLG00000037019	ENSHGLG00000036337 #32	CYP17A1 (ENSHGLG00000002087) #33	WBP1L (ENSHGLG00000036528) #34	ARL3 (ENSHGLG00000038237) #36	ENSHGLG00000003650 #35
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Long-tailed chinchilla	MODERN SPECIES	192	SORCS3 (ENSCLAG00000001473) #8	CFAP58 (ENSCLAG00000001586) #9	ITPRIP (ENSCLAG00000001636) #10	GSTO2 (ENSCLAG00000001887) #11	GSTO1 (ENSCLAG00000001308) #12	ENSCLAG00000017434	CFAP43 (ENSCLAG00000001343) #13	SFR1 (ENSCLAG00000001521) #14	ENSCLAG00000001543	SLK (ENSCLAG00000001596) #16	STN1 (ENSCLAG00000001617) #17	SH3PXD2A (ENSCLAG00000001679) #18	ENSCLAG00000001821 #19	CALHM3 (ENSCLAG00000001834) #20	CALHM1 (ENSCLAG00000001842) #21	CALHM2 (ENSCLAG00000001846) #22	PDCD11 (ENSCLAG00000001029) #23	ATP5MK (ENSCLAG00000001049) #24	TAF5 (ENSCLAG00000001063) #25	PCGF6 (ENSCLAG00000001188) #26	ENSCLAG00000001199 #27	NT5C2 (ENSCLAG00000001259) #29	ENSCLAG00000017436	CNNM2 (ENSCLAG00000001443) #30	AS3MT (ENSCLAG00000001482) #31	BORCS7 (ENSCLAG00000001557) #32	CYP17A1 (ENSCLAG00000000920) #33	WBP1L (ENSCLAG00000000978) #34	SFXN2 (ENSCLAG00000001037) #35	ARL3 (ENSCLAG00000001055) #36	TRIM8 (ENSCLAG00000001092) #37
Degu	MODERN SPECIES	83	SORCS1 (ENSODEG00000008187) #7	SORCS3 (ENSODEG00000009208) #8	CFAP58 (ENSODEG00000011571) #9	GSTO2 (ENSODEG00000007911) #11	GSTO1 (ENSODEG00000011067) #12	ENSODEG00000019763	CFAP43 (ENSODEG00000009391) #13	COL17A1 (ENSODEG00000007918) #15	ENSODEG00000008493	SLK (ENSODEG00000008144) #16	STN1 (ENSODEG00000007270) #17	SH3PXD2A (ENSODEG00000009308) #18	NEURL1 (ENSODEG00000007869) #19	CALHM3 (ENSODEG00000007501) #20	CALHM1 (ENSODEG00000008264) #21	CALHM2 (ENSODEG00000008107) #22	PDCD11 (ENSODEG00000008079) #23	ENSODEG00000009533 #24	TAF5 (ENSODEG00000009100) #25	ENSODEG00000007978	PCGF6 (ENSODEG00000007645) #26	INA (ENSODEG00000008267) #27	NT5C2 (ENSODEG00000012028) #29	ENSODEG00000009282	CNNM2 (ENSODEG00000008114) #30	AS3MT (ENSODEG00000008429) #31	BORCS7 (ENSODEG00000009160) #32	CYP17A1 (ENSODEG00000008480) #33	ENSODEG00000008163	ENSODEG00000019732	WBP1L (ENSODEG00000009321) #34
Guinea pig	MODERN SPECIES	11	SORCS1 (ENSCPOG00000012755) #7	SORCS3 (ENSCPOG00000014152) #8	CFAP58 (ENSCPOG00000000492) #9	ITPRIP (ENSCPOG00000037693) #10	GSTO2 (ENSCPOG00000012825) #11	GSTO1 (ENSCPOG00000001014) #12	CFAP43 (ENSCPOG00000001007) #13	SFR1 (ENSCPOG00000001002) #14	COL17A1 (ENSCPOG00000000997) #15	SLK (ENSCPOG00000000992) #16	STN1 (ENSCPOG00000006273) #17	SH3PXD2A (ENSCPOG00000006269) #18	NEURL1 (ENSCPOG00000006578) #19	CALHM3 (ENSCPOG00000013132) #20	CALHM1 (ENSCPOG00000010968) #21	CALHM2 (ENSCPOG00000040598) #22	PDCD11 (ENSCPOG00000010957) #23	ATP5MK (ENSCPOG00000005303) #24	TAF5 (ENSCPOG00000005294) #25	PCGF6 (ENSCPOG00000004021) #26	INA (ENSCPOG00000004030) #27	NT5C2 (ENSCPOG00000015748) #29	CNNM2 (ENSCPOG00000015746) #30	BORCS7 (ENSCPOG00000032430) #32	CYP17A1 (ENSCPOG00000014546) #33	WBP1L (ENSCPOG00000033991) #34	SFXN2 (ENSCPOG00000014474) #35	ARL3 (ENSCPOG00000014473) #36	TRIM8 (ENSCPOG00000012305) #37	SUFU (ENSCPOG00000011097)	ACTR1A (ENSCPOG00000011090)
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Kangaroo rat	MODERN SPECIES	355	Sorcs3 (ENSDORG00000001731) #8	Cfap58 (ENSDORG00000004546) #9	Itprip (ENSDORG00000008954) #10	Gsto2 (ENSDORG00000008953) #11	Gsto1 (ENSDORG00000008950) #12	Cfap43 (ENSDORG00000008947) #13	ENSDORG00000008943 #14	ENSDORG00000028434	Col17a1 (ENSDORG00000009335) #15	Slk (ENSDORG00000008154) #16	Stn1 (ENSDORG00000005994) #17	Sh3pxd2a (ENSDORG00000010430) #18	Neurl1a (ENSDORG00000010429) #19	Calhm3 (ENSDORG00000010428) #20	Calhm1 (ENSDORG00000010427) #21	Calhm2 (ENSDORG00000010426) #22	Pdcd11 (ENSDORG00000010420) #23	Atp5md (ENSDORG00000010419) #24	Taf5 (ENSDORG00000010418) #25	Pcgf6 (ENSDORG00000027870) #26	Ina (ENSDORG00000027651) #27	Nt5c2 (ENSDORG00000005467) #29	As3mt (ENSDORG00000010407) #31	Borcs7 (ENSDORG00000004480) #32	Cyp17a1 (ENSDORG00000006774) #33	Wbp1l (ENSDORG00000002274) #34	Sfxn2 (ENSDORG00000002258) #35	Arl3 (ENSDORG00000012086) #36	Trim8 (ENSDORG00000027571) #37	Sufu (ENSDORG00000003105)	Actr1a (ENSDORG00000027112)
Myomorpha	ANCESTRAL SPECIES	1	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Muroidea	ANCESTRAL SPECIES	1	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Muroidea_A	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Murinae	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Mus	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Mus_A	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Mus_B	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Mus_C	ANCESTRAL SPECIES	24	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
spretus	MODERN SPECIES	10	Sorcs1 (MGP_SPRETEiJ_G0023987) #7	Sorcs3 (MGP_SPRETEiJ_G0023986) #8	Cfap58 (MGP_SPRETEiJ_G0023985) #9	Gsto2 (MGP_SPRETEiJ_G0023984) #11	Gsto1 (MGP_SPRETEiJ_G0023983) #12	Cfap43 (MGP_SPRETEiJ_G0023982) #13	Sfr1 (MGP_SPRETEiJ_G0023981) #14	Col17a1 (MGP_SPRETEiJ_G0023980) #15	Slk (MGP_SPRETEiJ_G0023979) #16	Stn1 (MGP_SPRETEiJ_G0023978) #17	Sh3pxd2a (MGP_SPRETEiJ_G0023977) #18	Neurl1a (MGP_SPRETEiJ_G0023976) #19	MGP_SPRETEiJ_G0023975	MGP_SPRETEiJ_G0023974 #20	Calhm1 (MGP_SPRETEiJ_G0023973) #21	Calhm2 (MGP_SPRETEiJ_G0023972) #22	Pdcd11 (MGP_SPRETEiJ_G0023971) #23	Taf5 (MGP_SPRETEiJ_G0023970) #25	Pcgf6 (MGP_SPRETEiJ_G0023969) #26	Ina (MGP_SPRETEiJ_G0023968) #27	Nt5c2 (MGP_SPRETEiJ_G0023967) #29	Cnnm2 (MGP_SPRETEiJ_G0023966) #30	As3mt (MGP_SPRETEiJ_G0023965) #31	Borcs7 (MGP_SPRETEiJ_G0023964) #32	Cyp17a1 (MGP_SPRETEiJ_G0023963) #33	Wbp1l (MGP_SPRETEiJ_G0023962) #34	Sfxn2 (MGP_SPRETEiJ_G0023961) #35	Arl3 (MGP_SPRETEiJ_G0023960) #36	Trim8 (MGP_SPRETEiJ_G0023959) #37	Sufu (MGP_SPRETEiJ_G0023958)	Actr1a (MGP_SPRETEiJ_G0023957)
Steppe mouse	MODERN SPECIES	3428	Sorcs3 (ENSMSIG00000031425) #8	Cfap58 (ENSMSIG00000031428) #9	Itprip (ENSMSIG00000031430) #10	Gsto2 (ENSMSIG00000031431) #11	Gsto1 (ENSMSIG00000031433) #12	Cfap43 (ENSMSIG00000031434) #13	Sfr1 (ENSMSIG00000031436) #14	Col17a1 (ENSMSIG00000031440) #15	Slk (ENSMSIG00000031453) #16	Stn1 (ENSMSIG00000031463) #17	Sh3pxd2a (ENSMSIG00000031465) #18	Neurl1a (ENSMSIG00000031466) #19	ENSMSIG00000031470	Calhm3 (ENSMSIG00000031471) #20	Calhm1 (ENSMSIG00000031472) #21	Calhm2 (ENSMSIG00000031473) #22	Pdcd11 (ENSMSIG00000031474) #23	ENSMSIG00000031479 #24	Taf5 (ENSMSIG00000031481) #25	Pcgf6 (ENSMSIG00000031488) #26	Ina (ENSMSIG00000031490) #27	Nt5c2 (ENSMSIG00000031492) #29	Cnnm2 (ENSMSIG00000031498) #30	As3mt (ENSMSIG00000031511) #31	ENSMSIG00000031515
Mouse	MODERN SPECIES	10	Sorcs1 (ENSMUSG00000043531) #7	Sorcs3 (ENSMUSG00000063434) #8	Cfap58 (ENSMUSG00000046585) #9	Itprip (ENSMUSG00000117975) #10	Gsto2 (ENSMUSG00000025069) #11	Gsto1 (ENSMUSG00000025068) #12	Cfap43 (ENSMUSG00000044948) #13	Sfr1 (ENSMUSG00000025066) #14	Col17a1 (ENSMUSG00000025064) #15	Slk (ENSMUSG00000025060) #16	Stn1 (ENSMUSG00000042694) #17	Sh3pxd2a (ENSMUSG00000053617) #18	Neurl1a (ENSMUSG00000006435) #19	Calhm3 (ENSMUSG00000094219) #20	Calhm1 (ENSMUSG00000079258) #21	Calhm2 (ENSMUSG00000033033) #22	Pdcd11 (ENSMUSG00000025047) #23	Atp5md (ENSMUSG00000071528) #24	Taf5 (ENSMUSG00000025049) #25	Pcgf6 (ENSMUSG00000025050) #26	Ina (ENSMUSG00000034336) #27	Nt5c2 (ENSMUSG00000025041) #29	Cnnm2 (ENSMUSG00000064105) #30	As3mt (ENSMUSG00000003559) #31	Borcs7 (ENSMUSG00000062376) #32	Cyp17a1 (ENSMUSG00000003555) #33	Wbp1l (ENSMUSG00000047731) #34	Sfxn2 (ENSMUSG00000025036) #35	Arl3 (ENSMUSG00000025035) #36	Trim8 (ENSMUSG00000025034) #37	Sufu (ENSMUSG00000025231)
Ryukyu mouse	MODERN SPECIES	10	Sorcs1 (MGP_CAROLIEiJ_G0023066) #7	Sorcs3 (MGP_CAROLIEiJ_G0023065) #8	Cfap58 (MGP_CAROLIEiJ_G0023064) #9	Gsto2 (MGP_CAROLIEiJ_G0023063) #11	Gsto1 (MGP_CAROLIEiJ_G0023062) #12	Itprip (MGP_CAROLIEiJ_G0023061) #10	Sfr1 (MGP_CAROLIEiJ_G0023060) #14	Col17a1 (MGP_CAROLIEiJ_G0023059) #15	Slk (MGP_CAROLIEiJ_G0023058) #16	Stn1 (MGP_CAROLIEiJ_G0023057) #17	Sh3pxd2a (MGP_CAROLIEiJ_G0023056) #18	Neurl1a (MGP_CAROLIEiJ_G0023055) #19	MGP_CAROLIEiJ_G0023054	Calhm3 (MGP_CAROLIEiJ_G0023053) #20	Calhm1 (MGP_CAROLIEiJ_G0023052) #21	Calhm2 (MGP_CAROLIEiJ_G0023051) #22	Pdcd11 (MGP_CAROLIEiJ_G0023050) #23	Taf5 (MGP_CAROLIEiJ_G0023049) #25	Pcgf6 (MGP_CAROLIEiJ_G0023048) #26	Ina (MGP_CAROLIEiJ_G0023047) #27	Nt5c2 (MGP_CAROLIEiJ_G0023046) #29	Cnnm2 (MGP_CAROLIEiJ_G0023045) #30	As3mt (MGP_CAROLIEiJ_G0023044) #31	Borcs7 (MGP_CAROLIEiJ_G0023043) #32	MGP_CAROLIEiJ_G0023042 #33	Wbp1l (MGP_CAROLIEiJ_G0023041) #34	Sfxn2 (MGP_CAROLIEiJ_G0023040) #35	Arl3 (MGP_CAROLIEiJ_G0023039) #36	Trim8 (MGP_CAROLIEiJ_G0023038) #37	Sufu (MGP_CAROLIEiJ_G0023037)	Actr1a (MGP_CAROLIEiJ_G0023036)
Shrew mouse	MODERN SPECIES		Sorcs1 (MGP_PahariEiJ_G0014556) #7	Sorcs3 (MGP_PahariEiJ_G0014555) #8	Cfap58 (MGP_PahariEiJ_G0014554) #9	MGP_PahariEiJ_G0014553 #11	Gsto1 (MGP_PahariEiJ_G0014552) #12	Cfap43 (MGP_PahariEiJ_G0014551) #13	Sfr1 (MGP_PahariEiJ_G0014550) #14	Col17a1 (MGP_PahariEiJ_G0014549) #15	Slk (MGP_PahariEiJ_G0014548) #16	Stn1 (MGP_PahariEiJ_G0014547) #17	Sh3pxd2a (MGP_PahariEiJ_G0014546) #18	Neurl1a (MGP_PahariEiJ_G0014545) #19	MGP_PahariEiJ_G0014544	Calhm3 (MGP_PahariEiJ_G0014543) #20	Calhm1 (MGP_PahariEiJ_G0014542) #21	Calhm2 (MGP_PahariEiJ_G0014541) #22	Pdcd11 (MGP_PahariEiJ_G0014540) #23	Taf5 (MGP_PahariEiJ_G0014539) #25	Pcgf6 (MGP_PahariEiJ_G0014538) #26	Ina (MGP_PahariEiJ_G0014537) #27	Cnnm2 (MGP_PahariEiJ_G0014535) #30	As3mt (MGP_PahariEiJ_G0014534) #31	Borcs7 (MGP_PahariEiJ_G0014533) #32	Cyp17a1 (MGP_PahariEiJ_G0014532) #33	Wbp1l (MGP_PahariEiJ_G0014531) #34	Sfxn2 (MGP_PahariEiJ_G0014530) #35	Arl3 (MGP_PahariEiJ_G0014529) #36	Trim8 (MGP_PahariEiJ_G0014528) #37	Sufu (MGP_PahariEiJ_G0014527)	Actr1a (MGP_PahariEiJ_G0014526)	Mfsd13a (MGP_PahariEiJ_G0014525)
Rat	MODERN SPECIES		Sorcs1 (ENSRNOG00000011313) #7	Sorcs3 (ENSRNOG00000028832) #8	Cfap58 (ENSRNOG00000049596) #9	Itprip (ENSRNOG00000046036) #10	Gsto2 (ENSRNOG00000069697) #11	Gsto1 (ENSRNOG00000028746) #12	Cfap43 (ENSRNOG00000036585) #13	Sfr1 (ENSRNOG00000012641) #14	Col17a1 (ENSRNOG00000012110) #15	Slk (ENSRNOG00000011339) #16	Stn1 (ENSRNOG00000020376) #17	Sh3pxd2a (ENSRNOG00000020353) #18	Neurl1 (ENSRNOG00000020339) #19	Calhm3 (ENSRNOG00000026086) #20	Calhm1 (ENSRNOG00000030682) #21	Calhm2 (ENSRNOG00000020325) #22	Pdcd11 (ENSRNOG00000020304) #23	Atp5mk (ENSRNOG00000020296) #24	Taf5 (ENSRNOG00000020274) #25	Pcgf6 (ENSRNOG00000020250) #26	Ina (ENSRNOG00000020248) #27	Nt5c2 (ENSRNOG00000020179) #29	Cnnm2 (ENSRNOG00000020113) #30	As3mt (ENSRNOG00000020081) #31	Borcs7 (ENSRNOG00000020076) #32	Cyp17a1 (ENSRNOG00000020035) #33	Wbp1l (ENSRNOG00000020020) #34	Sfxn2 (ENSRNOG00000066618) #35	Arl3 (ENSRNOG00000019973) #36	Trim8 (ENSRNOG00000019968) #37	Sufu (ENSRNOG00000019807)
Cricetidae	ANCESTRAL SPECIES	1	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Cricetinae	ANCESTRAL SPECIES	2	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Golden Hamster	MODERN SPECIES	617	Sorcs1 (ENSMAUG00000018951) #7	ENSMAUG00000013138	Sorcs3 (ENSMAUG00000015825) #8	Cfap58 (ENSMAUG00000013160) #9	Itprip (ENSMAUG00000013125) #10	Gsto2 (ENSMAUG00000014690) #11	Gsto1 (ENSMAUG00000013312) #12	Cfap43 (ENSMAUG00000013498) #13	ENSMAUG00000014420 #14	Col17a1 (ENSMAUG00000013570) #15	Slk (ENSMAUG00000015490) #16	Stn1 (ENSMAUG00000015671) #17	Sh3pxd2a (ENSMAUG00000015375) #18	Neurl1a (ENSMAUG00000017257) #19	Calhm3 (ENSMAUG00000015186) #20	Calhm2 (ENSMAUG00000015326) #22	Pdcd11 (ENSMAUG00000014924) #23	ENSMAUG00000013644 #24	Taf5 (ENSMAUG00000013709) #25	Pcgf6 (ENSMAUG00000017896) #26	ENSMAUG00000018081 #29	Cnnm2 (ENSMAUG00000016097) #30	Borcs7 (ENSMAUG00000016537) #32	Cyp17a1 (ENSMAUG00000015290) #33	Sfxn2 (ENSMAUG00000015554) #35	ENSMAUG00000014603 #36	Trim8 (ENSMAUG00000015163) #37	Sufu (ENSMAUG00000017018)	ENSMAUG00000017290	Mfsd13a (ENSMAUG00000014106)	Cuedc2 (ENSMAUG00000015254)
Chinese hamster chok1gshd	MODERN SPECIES	215	Sorcs1 (ENSCGRG00001015262) #7	Sorcs3 (ENSCGRG00001013586) #8	Cfap58 (ENSCGRG00001018536) #9	Itprip (ENSCGRG00001015730) #10	Gsto2 (ENSCGRG00001019874) #11	Gsto1 (ENSCGRG00001001908) #12	Cfap43 (ENSCGRG00001011254) #13	ENSCGRG00001015549 #14	Col17a1 (ENSCGRG00001022203) #15	Slk (ENSCGRG00001015388) #16	Stn1 (ENSCGRG00001023175) #17	Sh3pxd2a (ENSCGRG00001019958) #18	Neurl1a (ENSCGRG00001021464) #19	Calhm3 (ENSCGRG00001022306) #20	Calhm1 (ENSCGRG00001023224) #21	Calhm2 (ENSCGRG00001023936) #22	Pdcd11 (ENSCGRG00001006458) #23	Taf5 (ENSCGRG00001008015) #25	ENSCGRG00001009088 #24	Pcgf6 (ENSCGRG00001007808) #26	Ina (ENSCGRG00001017461) #27	Nt5c2 (ENSCGRG00001021778) #29	Cnnm2 (ENSCGRG00001022341) #30	As3mt (ENSCGRG00001009254) #31	Borcs7 (ENSCGRG00001018546) #32	Cyp17a1 (ENSCGRG00001019418) #33	ENSCGRG00001012898 #34	Sfxn2 (ENSCGRG00001018053) #35	Arl3 (ENSCGRG00001020323) #36	Trim8 (ENSCGRG00001024342) #37	Sufu (ENSCGRG00001006263)
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Prairie vole	MODERN SPECIES	16	Sorcs1 (ENSMOCG00000013093) #7	Sorcs3 (ENSMOCG00000022537) #8	Cfap58 (ENSMOCG00000019696) #9	Itprip (ENSMOCG00000018021) #10	Gsto2 (ENSMOCG00000016225) #11	Gsto1 (ENSMOCG00000009660) #12	Cfap43 (ENSMOCG00000020363) #13	Sfr1 (ENSMOCG00000008461) #14	Col17a1 (ENSMOCG00000011193) #15	Slk (ENSMOCG00000017350) #16	Stn1 (ENSMOCG00000009637) #17	Sh3pxd2a (ENSMOCG00000019474) #18	Neurl1a (ENSMOCG00000022886) #19	Calhm3 (ENSMOCG00000021541) #20	Calhm1 (ENSMOCG00000000659) #21	Calhm2 (ENSMOCG00000018955) #22	Pdcd11 (ENSMOCG00000021792) #23	ENSMOCG00000013733 #24	Taf5 (ENSMOCG00000014640) #25	Pcgf6 (ENSMOCG00000014072) #26	ENSMOCG00000015820 #27	Nt5c2 (ENSMOCG00000017482) #29	ENSMOCG00000002709	Cnnm2 (ENSMOCG00000015680) #30	As3mt (ENSMOCG00000008340) #31	Borcs7 (ENSMOCG00000013474) #32	Cyp17a1 (ENSMOCG00000003696) #33	Wbp1l (ENSMOCG00000022618) #34	Sfxn2 (ENSMOCG00000018233) #35	Arl3 (ENSMOCG00000015961) #36	Trim8 (ENSMOCG00000013735) #37
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000026304	Sorcs3 (ENSPEMG00000016181) #8	Cfap58 (ENSPEMG00000023665) #9	Itprip (ENSPEMG00000025439) #10	Gsto2 (ENSPEMG00000013574) #11	ENSPEMG00000000407 #12	Cfap43 (ENSPEMG00000007262) #13	ENSPEMG00000010098 #14	Col17a1 (ENSPEMG00000010272) #15	Slk (ENSPEMG00000003363) #16	Stn1 (ENSPEMG00000013944) #17	Sh3pxd2a (ENSPEMG00000028132) #18	Neurl1a (ENSPEMG00000000552) #19	Calhm3 (ENSPEMG00000018627) #20	Calhm1 (ENSPEMG00000010575) #21	Calhm2 (ENSPEMG00000016278) #22	Pdcd11 (ENSPEMG00000010315) #23	ENSPEMG00000000483 #24	Taf5 (ENSPEMG00000002770) #25	Pcgf6 (ENSPEMG00000003171) #26	Ina (ENSPEMG00000007890) #27	Nt5c2 (ENSPEMG00000003970) #29	Cnnm2 (ENSPEMG00000017920) #30	As3mt (ENSPEMG00000011699) #31	Borcs7 (ENSPEMG00000030674) #32	Cyp17a1 (ENSPEMG00000016883) #33	Wbp1l (ENSPEMG00000002955) #34	Sfxn2 (ENSPEMG00000012438) #35	Arl3 (ENSPEMG00000012608) #36	Trim8 (ENSPEMG00000027998) #37	Sufu (ENSPEMG00000009470)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300			Sorcs1 (ENSNGAG00000022400) #7	Sorcs3 (ENSNGAG00000009911) #8	Cfap58 (ENSNGAG00000023340) #9	Gsto2 (ENSNGAG00000023312) #11	Gsto1 (ENSNGAG00000016801) #12	Col17a1 (ENSNGAG00000014613) #15	Slk (ENSNGAG00000013115) #16	Stn1 (ENSNGAG00000023986) #17	ENSNGAG00000022667	Sh3pxd2a (ENSNGAG00000005200) #18	Neurl1a (ENSNGAG00000008250) #19	Calhm3 (ENSNGAG00000003356) #20	Calhm1 (ENSNGAG00000022846) #21	Calhm2 (ENSNGAG00000021638) #22	Pdcd11 (ENSNGAG00000018143) #23	Atp5md (ENSNGAG00000019237) #24	Taf5 (ENSNGAG00000019082) #25	Pcgf6 (ENSNGAG00000004236) #26	Ina (ENSNGAG00000023775) #27	ENSNGAG00000020356	Nt5c2 (ENSNGAG00000014147) #29	Cnnm2 (ENSNGAG00000021894) #30	As3mt (ENSNGAG00000021235) #31	Borcs7 (ENSNGAG00000020067) #32	Cyp17a1 (ENSNGAG00000023337) #33	Wbp1l (ENSNGAG00000006319) #34	Sfxn2 (ENSNGAG00000013387) #35	Arl3 (ENSNGAG00000024014) #36	Trim8 (ENSNGAG00000023166) #37
Lesser Egyptian jerboa	MODERN SPECIES	70	Sorcs3 (ENSJJAG00000012838) #8	Cfap58 (ENSJJAG00000022379) #9	ENSJJAG00000016144	ENSJJAG00000021535	Itprip (ENSJJAG00000000469) #10	Gsto2 (ENSJJAG00000014900) #11	Gsto1 (ENSJJAG00000018251) #12	Cfap43 (ENSJJAG00000024398) #13	Col17a1 (ENSJJAG00000020946) #15	Slk (ENSJJAG00000017467) #16	Stn1 (ENSJJAG00000020389) #17	Sh3pxd2a (ENSJJAG00000010532) #18	Neurl1a (ENSJJAG00000015435) #19	Calhm3 (ENSJJAG00000022667) #20	Calhm1 (ENSJJAG00000009035) #21	Calhm2 (ENSJJAG00000017511) #22	Pdcd11 (ENSJJAG00000015523) #23	Atp5md (ENSJJAG00000018060) #24	Taf5 (ENSJJAG00000002025) #25	Ina (ENSJJAG00000024219) #27	Nt5c2 (ENSJJAG00000023674) #29	Cnnm2 (ENSJJAG00000024042) #30	As3mt (ENSJJAG00000017269) #31	Borcs7 (ENSJJAG00000019848) #32	ENSJJAG00000007546	Cyp17a1 (ENSJJAG00000020313) #33	Wbp1l (ENSJJAG00000005618) #34	Sfxn2 (ENSJJAG00000020334) #35	Arl3 (ENSJJAG00000001249) #36	Trim8 (ENSJJAG00000022961) #37	Sufu (ENSJJAG00000004811)
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Suina	ANCESTRAL SPECIES	6	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Pig	MODERN SPECIES	5	SORCS3 (ENSSSCG00000010617) #8	CFAP58 (ENSSSCG00000010614) #9	ITPRIP (ENSSSCG00000010613) #10	GSTO2 (ENSSSCG00000030271) #11	GSTO1 (ENSSSCG00000022351) #12	ENSSSCG00000010610 #12	CFAP43 (ENSSSCG00000010609) #13	SFR1 (ENSSSCG00000010608) #14	COL17A1 (ENSSSCG00000010607) #15	SLK (ENSSSCG00000010606) #16	STN1 (ENSSSCG00000010605) #17	SH3PXD2A (ENSSSCG00000010604) #18	NEURL1 (ENSSSCG00000010603) #19	CALHM3 (ENSSSCG00000034671) #20	CALHM1 (ENSSSCG00000010601) #21	CALHM2 (ENSSSCG00000010600) #22	PDCD11 (ENSSSCG00000010599) #23	ATP5MK (ENSSSCG00000032165) #24	TAF5 (ENSSSCG00000010597) #25	PCGF6 (ENSSSCG00000020954) #26	INA (ENSSSCG00000010595) #27	NT5C2 (ENSSSCG00000010594) #29	CNNM2 (ENSSSCG00000010593) #30	AS3MT (ENSSSCG00000010592) #31	BORCS7 (ENSSSCG00000038633) #32	CYP17A1 (ENSSSCG00000010591) #33	WBP1L (ENSSSCG00000029594) #34	SFXN2 (ENSSSCG00000010589) #35	ARL3 (ENSSSCG00000031782) #36	TRIM8 (ENSSSCG00000038856) #37	ENSSSCG00000041413
Chacoan peccary	MODERN SPECIES	955	SORCS1 (ENSCWAG00000021655) #7	SORCS3 (ENSCWAG00000021774) #8	CFAP58 (ENSCWAG00000021795) #9	ITPRIP (ENSCWAG00000021802) #10	GSTO2 (ENSCWAG00000021807) #11	GSTO1 (ENSCWAG00000021817) #12	CFAP43 (ENSCWAG00000021831) #13	SFR1 (ENSCWAG00000010419) #14	COL17A1 (ENSCWAG00000010502) #15	SLK (ENSCWAG00000011479) #16	STN1 (ENSCWAG00000011621) #17	SH3PXD2A (ENSCWAG00000011699) #18	NEURL1 (ENSCWAG00000011779) #19	CALHM3 (ENSCWAG00000011859) #20	CALHM1 (ENSCWAG00000011899) #21	CALHM2 (ENSCWAG00000011925) #22	PDCD11 (ENSCWAG00000011961) #23	ATP5MK (ENSCWAG00000012035) #24	TAF5 (ENSCWAG00000012095) #25	PCGF6 (ENSCWAG00000012211) #26	INA (ENSCWAG00000012252) #27	NT5C2 (ENSCWAG00000012289) #29	CNNM2 (ENSCWAG00000012366) #30	AS3MT (ENSCWAG00000012429) #31	BORCS7 (ENSCWAG00000012528) #32	ENSCWAG00000012570	CYP17A1 (ENSCWAG00000012610) #33	WBP1L (ENSCWAG00000013043) #34	ENSCWAG00000013109 #35	ARL3 (ENSCWAG00000013159) #36	TRIM8 (ENSCWAG00000013236) #37
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Cetacea	ANCESTRAL SPECIES	15	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m #34	ENSGT01030000234641.b.a.a #35
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Beluga whale	MODERN SPECIES	65	ENSDLEG00000012496	SORCS3 (ENSDLEG00000012501) #8	CFAP58 (ENSDLEG00000012529) #9	ITPRIP (ENSDLEG00000012555) #10	GSTO2 (ENSDLEG00000012561) #11	GSTO1 (ENSDLEG00000012569) #12	CFAP43 (ENSDLEG00000012588) #13	SFR1 (ENSDLEG00000012724) #14	COL17A1 (ENSDLEG00000012764) #15	SLK (ENSDLEG00000013132) #16	STN1 (ENSDLEG00000013196) #17	SH3PXD2A (ENSDLEG00000008838) #18	NEURL1 (ENSDLEG00000008927) #19	CALHM3 (ENSDLEG00000008972) #20	CALHM1 (ENSDLEG00000009015) #21	CALHM2 (ENSDLEG00000009041) #22	PDCD11 (ENSDLEG00000009147) #23	USMG5 (ENSDLEG00000009255) #24	TAF5 (ENSDLEG00000009272) #25	PCGF6 (ENSDLEG00000009308) #26	INA (ENSDLEG00000009353) #27	NT5C2 (ENSDLEG00000009371)	CNNM2 (ENSDLEG00000009405) #30	AS3MT (ENSDLEG00000009479) #31	BORCS7 (ENSDLEG00000009520) #32	CYP17A1 (ENSDLEG00000009531) #33	SFXN2 (ENSDLEG00000009564) #35	ARL3 (ENSDLEG00000009629) #36	TRIM8 (ENSDLEG00000009697) #37	SUFU (ENSDLEG00000009757)	ACTR1A (ENSDLEG00000009891)
Narwhal	MODERN SPECIES	311	ENSMMNG00015014339	SORCS3 (ENSMMNG00015014281) #8	CFAP58 (ENSMMNG00015014243) #9	ITPRIP (ENSMMNG00015014222) #10	GSTO2 (ENSMMNG00015014209) #11	GSTO1 (ENSMMNG00015014192) #12	CFAP43 (ENSMMNG00015014169) #13	SFR1 (ENSMMNG00015014153) #14	COL17A1 (ENSMMNG00015013979) #15	SLK (ENSMMNG00015013837) #16	STN1 (ENSMMNG00015013736) #17	SH3PXD2A (ENSMMNG00015013681) #18	NEURL1 (ENSMMNG00015013659) #19	CALHM3 (ENSMMNG00015013638) #20	CALHM1 (ENSMMNG00015013618) #21	CALHM2 (ENSMMNG00015013608) #22	PDCD11 (ENSMMNG00015013562) #23	ATP5MK (ENSMMNG00015013543) #24	TAF5 (ENSMMNG00015013528) #25	PCGF6 (ENSMMNG00015013501) #26	INA (ENSMMNG00015013479) #27	ENSMMNG00015013465	CNNM2 (ENSMMNG00015013452) #30	AS3MT (ENSMMNG00015013420) #31	BORCS7 (ENSMMNG00015013396) #32	ENSMMNG00015013382	CYP17A1 (ENSMMNG00015013335) #33	ENSMMNG00015013292 #34	SFXN2 (ENSMMNG00015013273) #35	ARL3 (ENSMMNG00015013259) #36	TRIM8 (ENSMMNG00015013233) #37
Vaquita	MODERN SPECIES	7	ENSPSNG00000020840	SORCS3 (ENSPSNG00000020579) #8	CFAP58 (ENSPSNG00000020428) #9	ITPRIP (ENSPSNG00000020395) #10	GSTO2 (ENSPSNG00000020348) #11	GSTO1 (ENSPSNG00000020286) #12	CFAP43 (ENSPSNG00000019933) #13	SFR1 (ENSPSNG00000019848) #14	COL17A1 (ENSPSNG00000019777) #15	SLK (ENSPSNG00000019646) #16	STN1 (ENSPSNG00000019572) #17	SH3PXD2A (ENSPSNG00000019335) #18	NEURL1 (ENSPSNG00000019212) #19	CALHM3 (ENSPSNG00000019156) #20	CALHM1 (ENSPSNG00000019125) #21	CALHM2 (ENSPSNG00000019092) #22	PDCD11 (ENSPSNG00000019025) #23	ENSPSNG00000018977 #24	TAF5 (ENSPSNG00000018939) #25	PCGF6 (ENSPSNG00000018827) #26	INA (ENSPSNG00000018790) #27	NT5C2 (ENSPSNG00000018760) #29	CNNM2 (ENSPSNG00000018654) #30	AS3MT (ENSPSNG00000018610) #31	BORCS7 (ENSPSNG00000018573) #32	ENSPSNG00000018533	CYP17A1 (ENSPSNG00000018242) #33	ENSPSNG00000018106 #34	SFXN2 (ENSPSNG00000018035) #35	ARL3 (ENSPSNG00000017986) #36	ENSPSNG00000017958
Dolphin	MODERN SPECIES	985											STN1 (ENSTTRG00000003375) #17	SH3PXD2A (ENSTTRG00000003374) #18	NEURL1 (ENSTTRG00000003372) #19	CALHM3 (ENSTTRG00000003370) #20	CALHM1 (ENSTTRG00000003368) #21	CALHM2 (ENSTTRG00000003364) #22	PDCD11 (ENSTTRG00000003356) #23	USMG5 (ENSTTRG00000003352) #24	TAF5 (ENSTTRG00000003344) #25	PCGF6 (ENSTTRG00000003333) #26	INA (ENSTTRG00000003328) #27
Sperm whale	MODERN SPECIES	12	SORCS1 (ENSPCTG00005012260) #7	ENSPCTG00005012185	SORCS3 (ENSPCTG00005011635) #8	CFAP58 (ENSPCTG00005011394) #9	ITPRIP (ENSPCTG00005021291) #10	GSTO2 (ENSPCTG00005021236) #11	GSTO1 (ENSPCTG00005021211) #12	CFAP43 (ENSPCTG00005021187) #13	ENSPCTG00005021155 #14	ENSPCTG00005021112	SLK (ENSPCTG00005021059) #16	STN1 (ENSPCTG00005021023) #17	SH3PXD2A (ENSPCTG00005020967) #18	NEURL1 (ENSPCTG00005020933) #19	CALHM3 (ENSPCTG00005020902) #20	CALHM2 (ENSPCTG00005020892) #22	PDCD11 (ENSPCTG00005020873) #23	ATP5MD (ENSPCTG00005020847) #24	TAF5 (ENSPCTG00005020833) #25	PCGF6 (ENSPCTG00005020785) #26	ENSPCTG00005020775	INA (ENSPCTG00005020759) #27	NT5C2 (ENSPCTG00005020690) #29	CNNM2 (ENSPCTG00005020562) #30	AS3MT (ENSPCTG00005020508) #31	BORCS7 (ENSPCTG00005020478) #32	CYP17A1 (ENSPCTG00005020262) #33	WBP1L (ENSPCTG00005020108) #34	ARL3 (ENSPCTG00005020073) #36	GBF1 (ENSPCTG00005019758)	NFKB2 (ENSPCTG00005019685)
Blue whale	MODERN SPECIES	7	ENSBMSG00010021559	ENSBMSG00010021564	SORCS3 (ENSBMSG00010021581) #8	CFAP58 (ENSBMSG00010021615) #9	ITPRIP (ENSBMSG00010021622) #10	GSTO2 (ENSBMSG00010021631) #11	GSTO1 (ENSBMSG00010021655) #12	CFAP43 (ENSBMSG00010021676) #13	SFR1 (ENSBMSG00010021686) #14	ENSBMSG00010021698	SLK (ENSBMSG00010021709) #16	STN1 (ENSBMSG00010021725) #17	SH3PXD2A (ENSBMSG00010021733) #18	NEURL1 (ENSBMSG00010021740) #19	CALHM1 (ENSBMSG00010021743) #21	CALHM2 (ENSBMSG00010013933) #22	PDCD11 (ENSBMSG00010013983) #23	ENSBMSG00010014054 #24	TAF5 (ENSBMSG00010014107) #25	PCGF6 (ENSBMSG00010014174) #26	INA (ENSBMSG00010014285) #27	NT5C2 (ENSBMSG00010014532) #29	CNNM2 (ENSBMSG00010014766) #30	AS3MT (ENSBMSG00010014924) #31	BORCS7 (ENSBMSG00010015015) #32	CYP17A1 (ENSBMSG00010015084) #33	ENSBMSG00010015401 #34	SFXN2 (ENSBMSG00010015478) #35	ARL3 (ENSBMSG00010015549) #36	TRIM8 (ENSBMSG00010015579) #37	SUFU (ENSBMSG00010015610)
Pecora	ANCESTRAL SPECIES	12	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Percora_a	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT00950000183109.c.a.a.p #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Bovidae	ANCESTRAL SPECIES	24	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Caprinae	ANCESTRAL SPECIES	19	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s.a #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.g.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.p #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Rambouillet Sheep	MODERN SPECIES	14	CFAP58 (ENSOARG00020010711) #9	ITPRIP (ENSOARG00020010665) #10	GSTO2 (ENSOARG00020010406) #11	ENSOARG00020010357 #12	ENSOARG00020010304 #12	CFAP43 (ENSOARG00020009695) #13	SFR1 (ENSOARG00020009619) #14	COL17A1 (ENSOARG00020009409) #15	SLK (ENSOARG00020009006) #16	STN1 (ENSOARG00020008923) #17	ENSOARG00020008903	SH3PXD2A (ENSOARG00020008650) #18	NEURL1 (ENSOARG00020008586) #19	CALHM3 (ENSOARG00020008557) #20	CALHM1 (ENSOARG00020008535) #21	CALHM2 (ENSOARG00020008493) #22	PDCD11 (ENSOARG00020008240) #23	ATP5MD (ENSOARG00020008172) #24	TAF5 (ENSOARG00020008039) #25	PCGF6 (ENSOARG00020007889) #26	INA (ENSOARG00020007851) #27	NT5C2 (ENSOARG00020007751) #29	CNNM2 (ENSOARG00020007642) #30	AS3MT (ENSOARG00020007602) #31	BORCS7 (ENSOARG00020007581) #32	CYP17A1 (ENSOARG00020007273) #33	ENSOARG00020007149 #33	ENSOARG00020007122	WBP1L (ENSOARG00020007033) #34	SFXN2 (ENSOARG00020006982) #35	ARL3 (ENSOARG00020006754) #36
Goat	MODERN SPECIES	18	SORCS3 (ENSCHIG00000004540) #8	CFAP58 (ENSCHIG00000016727) #9	ITPRIP (ENSCHIG00000020814) #10	GSTO2 (ENSCHIG00000003139) #11	ENSCHIG00000010963 #12	CFAP43 (ENSCHIG00000019392) #13	ENSCHIG00000019373 #12	SFR1 (ENSCHIG00000020297) #14	COL17A1 (ENSCHIG00000013715) #15	SLK (ENSCHIG00000017273) #16	ENSCHIG00000019425 #17	SH3PXD2A (ENSCHIG00000012501) #18	NEURL1 (ENSCHIG00000021908) #19	CALHM3 (ENSCHIG00000019527) #20	CALHM1 (ENSCHIG00000000587) #21	CALHM2 (ENSCHIG00000014672) #22	PDCD11 (ENSCHIG00000025218) #23	ENSCHIG00000003414 #24	TAF5 (ENSCHIG00000011203) #25	PCGF6 (ENSCHIG00000011396) #26	INA (ENSCHIG00000021339) #27	NT5C2 (ENSCHIG00000016169) #29	CNNM2 (ENSCHIG00000016492) #30	AS3MT (ENSCHIG00000013994) #31	BORCS7 (ENSCHIG00000000549) #32	CYP17A1A (ENSCHIG00000015158) #33	CYP17A1B (ENSCHIG00000005308) #33	WBP1L (ENSCHIG00000016756) #34	SFXN2 (ENSCHIG00000005366) #35	ARL3 (ENSCHIG00000012000) #36	TRIM8 (ENSCHIG00000012123) #37
Bovinae	ANCESTRAL SPECIES	22	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Bos	ANCESTRAL SPECIES	23	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a
Bos_a	ANCESTRAL SPECIES	17	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a
Domestic yak	MODERN SPECIES	17	CFAP58 (ENSBGRG00000013270) #9	ITPRIP (ENSBGRG00000013250) #10	GSTO2 (ENSBGRG00000013033) #11	ENSBGRG00000012997	GSTO1 (ENSBGRG00000012710) #12	ENSBGRG00000012602 #13	ENSBGRG00000012536 #13	SFR1 (ENSBGRG00000012483) #14	COL17A1 (ENSBGRG00000010903) #15	SLK (ENSBGRG00000010186) #16	STN1 (ENSBGRG00000010099) #17	SH3PXD2A (ENSBGRG00000009950) #18	NEURL1 (ENSBGRG00000009848) #19	CALHM3 (ENSBGRG00000009815) #20	CALHM1 (ENSBGRG00000009787) #21	CALHM2 (ENSBGRG00000009752) #22	PDCD11 (ENSBGRG00000009626) #23	ENSBGRG00000009559 #24	ENSBGRG00000009527 #24	TAF5 (ENSBGRG00000009421) #25	PCGF6 (ENSBGRG00000009240) #26	INA (ENSBGRG00000009201) #27	ENSBGRG00000009166	NT5C2 (ENSBGRG00000008985) #29	CNNM2 (ENSBGRG00000008807) #30	AS3MT (ENSBGRG00000008703) #31	BORCS7 (ENSBGRG00000008664) #32	ENSBGRG00000008565 #33	ENSBGRG00000008360 #33	ENSBGRG00000007921 #33	WBP1L (ENSBGRG00000007712) #34
Wild yak	MODERN SPECIES	124											STN1 (ENSBMUG00000000696) #17	SH3PXD2A (ENSBMUG00000000732) #18	NEURL1 (ENSBMUG00000000765) #19	CALHM3 (ENSBMUG00000000783) #20	CALHM1 (ENSBMUG00000000792) #21	CALHM2 (ENSBMUG00000000810) #22	PDCD11 (ENSBMUG00000000897) #23	ENSBMUG00000000948 #24	TAF5 (ENSBMUG00000000970) #25	PCGF6 (ENSBMUG00000000995) #26	INA (ENSBMUG00000001016) #27	NT5C2 (ENSBMUG00000001069) #29	ENSBMUG00000001099	CNNM2 (ENSBMUG00000001127) #30	AS3MT (ENSBMUG00000001150) #31	BORCS7 (ENSBMUG00000001161) #32	ENSBMUG00000001210 #33	ENSBMUG00000001320 #33	WBP1L (ENSBMUG00000001345) #34	SFXN2 (ENSBMUG00000001395) #35	ARL3 (ENSBMUG00000001439) #36
Bos_b	ANCESTRAL SPECIES	23	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.a.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a	ENSGT01030000234641.b.a.a #35
Hybrid Bos Indicus	MODERN SPECIES	18	SORCS1 (ENSBIXG00005005587) #7	SORCS3 (ENSBIXG00005014866) #8	CFAP58 (ENSBIXG00005014662) #9	ITPRIP (ENSBIXG00005002045) #10	GSTO2 (ENSBIXG00005014610) #11	GSTO1 (ENSBIXG00005002028) #12	CFAP43 (ENSBIXG00005006740) #13	SFR1 (ENSBIXG00005014485) #14	COL17A1 (ENSBIXG00005014449) #15	SLK (ENSBIXG00005014357) #16	STN1 (ENSBIXG00005014161) #17	SH3PXD2A (ENSBIXG00005007453) #18	NEURL1 (ENSBIXG00005007451) #19	CALHM3 (ENSBIXG00005013942) #20	CALHM1 (ENSBIXG00005013926) #21	CALHM2 (ENSBIXG00005013905) #22	PDCD11 (ENSBIXG00005013880) #23	ENSBIXG00005005925 #24	TAF5 (ENSBIXG00005013813) #25	PCGF6 (ENSBIXG00005013781) #26	INA (ENSBIXG00005013717) #27	NT5C2 (ENSBIXG00005013678) #29	ENSBIXG00005013582	CNNM2 (ENSBIXG00005013565) #30	ENSBIXG00005013480	AS3MT (ENSBIXG00005013473) #31	BORCS7 (ENSBIXG00005013454) #32	ENSBIXG00005013433	ENSBIXG00005013421 #33	ENSBIXG00005013390 #33	ENSBIXG00005013254 #34
Cow	MODERN SPECIES	18	CFAP58 (ENSBTAG00000007243) #9	ITPRIP (ENSBTAG00000003990) #10	GSTO2 (ENSBTAG00000040290) #11	GSTO1 (ENSBTAG00000003989) #12	ENSBTAG00000038540 #12	CFAP43 (ENSBTAG00000014574) #13	SFR1 (ENSBTAG00000047450) #14	COL17A1 (ENSBTAG00000002430) #15	SLK (ENSBTAG00000001017) #16	STN1 (ENSBTAG00000015019) #17	ENSBTAG00000048488 #18	SH3PXD2A (ENSBTAG00000044153) #18	NEURL1 (ENSBTAG00000003741) #19	CALHM3 (ENSBTAG00000032761) #20	CALHM1 (ENSBTAG00000007044) #21	CALHM2 (ENSBTAG00000009719) #22	PDCD11 (ENSBTAG00000009715) #23	ATP5MK (ENSBTAG00000009713) #24	TAF5 (ENSBTAG00000009709) #25	PCGF6 (ENSBTAG00000009879) #26	INA (ENSBTAG00000002717) #27	NT5C2 (ENSBTAG00000012858) #29	CNNM2 (ENSBTAG00000012857) #30	ENSBTAG00000054629	ENSBTAG00000053360	AS3MT (ENSBTAG00000036127) #31	ENSBTAG00000053826 #32	CYP17A1 (ENSBTAG00000014335) #33	ENSBTAG00000054516 #33	CYP17A1 (ENSBTAG00000049558) #33	WBP1L (ENSBTAG00000014336) #34
American bison	MODERN SPECIES	3316	SORCS3 (ENSBBBG00000023649) #8	CFAP58 (ENSBBBG00000006154) #9	ITPRIP (ENSBBBG00000023524) #10	GSTO2 (ENSBBBG00000023515) #11	ENSBBBG00000008631 #12	ENSBBBG00000023450 #12	CFAP43 (ENSBBBG00000023436) #13	SFR1 (ENSBBBG00000023370) #14	COL17A1 (ENSBBBG00000006107) #15	SLK (ENSBBBG00000006071) #16	STN1 (ENSBBBG00000023099) #17	SH3PXD2A (ENSBBBG00000022954) #18	NEURL1 (ENSBBBG00000022879) #19	CALHM3 (ENSBBBG00000022873) #20	CALHM1 (ENSBBBG00000022866) #21	CALHM2 (ENSBBBG00000022855) #22	PDCD11 (ENSBBBG00000022849) #23	ENSBBBG00000022765 #24	TAF5 (ENSBBBG00000005985) #25	PCGF6 (ENSBBBG00000022739) #26	INA (ENSBBBG00000022709) #27	NT5C2 (ENSBBBG00000022699) #29	ENSBBBG00000022663	CNNM2 (ENSBBBG00000005962) #30	AS3MT (ENSBBBG00000022602) #31	BORCS7 (ENSBBBG00000022589) #32	CYP17A1 (ENSBBBG00000022580) #33	WBP1L (ENSBBBG00000022572) #34	SFXN2 (ENSBBBG00000022549) #35	ARL3 (ENSBBBG00000022525) #36	TRIM8 (ENSBBBG00000022513) #37
Siberian musk deer	MODERN SPECIES	1162	SORCS1 (ENSMMSG00000021947) #7	SORCS3 (ENSMMSG00000022440) #8	CFAP58 (ENSMMSG00000022547) #9	ITPRIP (ENSMMSG00000022580) #10	GSTO2 (ENSMMSG00000022589) #11	GSTO1 (ENSMMSG00000022646) #12	CFAP43 (ENSMMSG00000022726) #13	SFR1 (ENSMMSG00000022773) #14	COL17A1 (ENSMMSG00000022824) #15	SLK (ENSMMSG00000023006) #16	STN1 (ENSMMSG00000023042) #17	SH3PXD2A (ENSMMSG00000023055) #18	NEURL1 (ENSMMSG00000023079) #19	CALHM3 (ENSMMSG00000023099) #20	CALHM1 (ENSMMSG00000023103) #21	CALHM2 (ENSMMSG00000023108) #22	PDCD11 (ENSMMSG00000023119) #23	ENSMMSG00000023134 #24	TAF5 (ENSMMSG00000023138) #25	ENSMMSG00000023151 #26	INA (ENSMMSG00000023173) #27	ENSMMSG00000023189	ENSMMSG00000023210	CNNM2 (ENSMMSG00000023218) #30	ENSMMSG00000023266 #31	BORCS7 (ENSMMSG00000023301) #32	CYP17A1 (ENSMMSG00000023330) #33	WBP1L (ENSMMSG00000023437) #34	SFXN2 (ENSMMSG00000023456) #35	ARL3 (ENSMMSG00000023474) #36	TRIM8 (ENSMMSG00000023486) #37
Yarkand deer	MODERN SPECIES	6	SORCS3 (ENSCHYG00000006900) #8	CFAP58 (ENSCHYG00000006776) #9	ITPRIP (ENSCHYG00000006759) #10	ENSCHYG00000006740	GSTO2 (ENSCHYG00000006622) #11	GSTO1 (ENSCHYG00000006501) #12	CFAP43 (ENSCHYG00000006430) #13	SFR1 (ENSCHYG00000006389) #14	COL17A1 (ENSCHYG00000005902) #15	SLK (ENSCHYG00000005694) #16	STN1 (ENSCHYG00000005613) #17	SH3PXD2A (ENSCHYG00000005529) #18	NEURL1 (ENSCHYG00000005486) #19	CALHM3 (ENSCHYG00000005447) #20	CALHM1 (ENSCHYG00000005428) #21	CALHM2 (ENSCHYG00000005405) #22	PDCD11 (ENSCHYG00000005348) #23	ENSCHYG00000005295 #24	TAF5 (ENSCHYG00000005235) #25	PCGF6 (ENSCHYG00000005140) #26	ENSCHYG00000016674	INA (ENSCHYG00000016625) #27	NT5C2 (ENSCHYG00000016134) #29	CNNM2 (ENSCHYG00000015538) #30	AS3MT (ENSCHYG00000015224) #31	BORCS7 (ENSCHYG00000015118) #32	ENSCHYG00000015093	WBP1L (ENSCHYG00000014950) #34	SFXN2 (ENSCHYG00000014532) #35	ARL3 (ENSCHYG00000014398) #36	TRIM8 (ENSCHYG00000014350) #37
Camelidae	ANCESTRAL SPECIES	4	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Arabian camel	MODERN SPECIES	2	SORCS1 (ENSCDRG00005006479) #7	SORCS3 (ENSCDRG00005007469) #8	CFAP58 (ENSCDRG00005008105) #9	ITPRIP (ENSCDRG00005008196) #10	GSTO2 (ENSCDRG00005008226) #11	GSTO1 (ENSCDRG00005008349) #12	CFAP43 (ENSCDRG00005008504) #13	SFR1 (ENSCDRG00005008585) #14	COL17A1 (ENSCDRG00005008684) #15	SLK (ENSCDRG00005010331) #16	STN1 (ENSCDRG00005010608) #17	SH3PXD2A (ENSCDRG00005010700) #18	NEURL1 (ENSCDRG00005010923) #19	CALHM3 (ENSCDRG00005011030) #20	CALHM1 (ENSCDRG00005011070) #21	CALHM2 (ENSCDRG00005011123) #22	PDCD11 (ENSCDRG00005011201) #23	ENSCDRG00005011960 #24	TAF5 (ENSCDRG00005011985) #25	PCGF6 (ENSCDRG00005012063) #26	INA (ENSCDRG00005012311) #27	NT5C2 (ENSCDRG00005012355) #29	CNNM2 (ENSCDRG00005012708) #30	AS3MT (ENSCDRG00005012899) #31	BORCS7 (ENSCDRG00005013001) #32	CYP17A1 (ENSCDRG00005013042) #33	WBP1L (ENSCDRG00005013170) #34	SFXN2 (ENSCDRG00005013237) #35	ARL3 (ENSCDRG00005013316) #36	TRIM8 (ENSCDRG00005013435) #37	SUFU (ENSCDRG00005013614)
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Carnivora	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Caniformia	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mustelinae	ANCESTRAL SPECIES	29		ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Ferret	MODERN SPECIES	187	CFAP58 (ENSMPUG00000016791) #9	ITPRIP (ENSMPUG00000020132) #10	GSTO2 (ENSMPUG00000016792) #11	GSTO1 (ENSMPUG00000016794) #12	CFAP43 (ENSMPUG00000016795) #13	SFR1 (ENSMPUG00000016796) #14	ENSMPUG00000016797	COL17A1 (ENSMPUG00000016798) #15	SLK (ENSMPUG00000016799) #16	STN1 (ENSMPUG00000016800) #17	ENSMPUG00000016805	SH3PXD2A (ENSMPUG00000016820) #18	NEURL1 (ENSMPUG00000016821) #19	ENSMPUG00000016822	CALHM3 (ENSMPUG00000016824) #20	CALHM2 (ENSMPUG00000016826) #22	PDCD11 (ENSMPUG00000016829) #23	TAF5 (ENSMPUG00000016831) #25	PCGF6 (ENSMPUG00000016842) #26	INA (ENSMPUG00000016844) #27	NT5C2 (ENSMPUG00000016845) #29	CNNM2 (ENSMPUG00000016848) #30	AS3MT (ENSMPUG00000016851) #31	BORCS7 (ENSMPUG00000016858) #32	CYP17A1 (ENSMPUG00000016860) #33	WBP1L (ENSMPUG00000016861) #34	SFXN2 (ENSMPUG00000016862) #35	ARL3 (ENSMPUG00000016864) #36	TRIM8 (ENSMPUG00000016866) #37	SUFU (ENSMPUG00000016867)	ACTR1A (ENSMPUG00000016868)
American mink	MODERN SPECIES	25	ENSNVIG00000015792	SORCS3 (ENSNVIG00000015831) #8	CFAP58 (ENSNVIG00000015885) #9	ITPRIP (ENSNVIG00000015925) #10	GSTO2 (ENSNVIG00000015938) #11	ENSNVIG00000015962 #12	CFAP43 (ENSNVIG00000016002) #13	SFR1 (ENSNVIG00000016083) #14	F5H0Q7 (ENSNVIG00000016116) #15	SLK (ENSNVIG00000016502) #16	STN1 (ENSNVIG00000016545) #17	SH3PXD2A (ENSNVIG00000016596) #18	NEURL1 (ENSNVIG00000016689) #19	CALHM3 (ENSNVIG00000016714) #20	CALHM1 (ENSNVIG00000016736) #21	CALHM2 (ENSNVIG00000016743) #22	PDCD11 (ENSNVIG00000016762) #23	ENSNVIG00000016873 #24	TAF5 (ENSNVIG00000016891) #25	PCGF6 (ENSNVIG00000016935) #26	INA (ENSNVIG00000016984) #27	NT5C2 (ENSNVIG00000016994) #29	CNNM2 (ENSNVIG00000017046) #30	ENSNVIG00000017111	BORCS7 (ENSNVIG00000017120) #32	CYP17A1 (ENSNVIG00000017144) #33	WBP1L (ENSNVIG00000017241) #34	SFXN2 (ENSNVIG00000017262) #35	ARL3 (ENSNVIG00000017289) #36	TRIM8 (ENSNVIG00000017306) #37	SUFU (ENSNVIG00000017315)
Ursidae	ANCESTRAL SPECIES	5	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Ursus	ANCESTRAL SPECIES	7	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
American black bear	MODERN SPECIES	2564												SH3PXD2A (ENSUAMG00000018116) #18	NEURL1 (ENSUAMG00000018115) #19	CALHM3 (ENSUAMG00000018114) #20	CALHM1 (ENSUAMG00000018113) #21	CALHM2 (ENSUAMG00000018112) #22	PDCD11 (ENSUAMG00000018015) #23	ATP5MK (ENSUAMG00000018005) #24
Polar bear	MODERN SPECIES	92	SORCS1 (ENSUMAG00000023682) #7	SORCS3 (ENSUMAG00000023676) #8	ENSUMAG00000023674	CFAP58 (ENSUMAG00000023672) #9	ITPRIP (ENSUMAG00000023671) #10	GSTO2 (ENSUMAG00000023665) #11	GSTO1 (ENSUMAG00000023662) #12	CFAP43 (ENSUMAG00000023657) #13	SFR1 (ENSUMAG00000023655) #14	ENSUMAG00000023654	SLK (ENSUMAG00000023651) #16	STN1 (ENSUMAG00000023647) #17	SH3PXD2A (ENSUMAG00000023643) #18	CALHM3 (ENSUMAG00000023638) #20	CALHM1 (ENSUMAG00000023637) #21	CALHM2 (ENSUMAG00000023635) #22	PDCD11 (ENSUMAG00000023567) #23	ATP5MK (ENSUMAG00000023547) #24	TAF5 (ENSUMAG00000023531) #25	ENSUMAG00000023524 #26	ENSUMAG00000023523	ENSUMAG00000023521 #27	ENSUMAG00000023519	CNNM2 (ENSUMAG00000023515) #30	AS3MT (ENSUMAG00000023512) #31	BORCS7 (ENSUMAG00000023510) #32	CYP17A1 (ENSUMAG00000023508) #33	WBP1L (ENSUMAG00000023506) #34	SFXN2 (ENSUMAG00000023501) #35	ARL3 (ENSUMAG00000023500) #36	TRIM8 (ENSUMAG00000023499) #37
Giant Panda	MODERN SPECIES	16	ENSAMEG00000028476	ENSAMEG00000018052 #8	CFAP58 (ENSAMEG00000018045) #9	ITPRIP (ENSAMEG00000020225) #10	ENSAMEG00000018041 #11	GSTO1 (ENSAMEG00000018030) #12	CFAP43 (ENSAMEG00000018011) #13	SFR1 (ENSAMEG00000018007) #14	ENSAMEG00000017991	SLK (ENSAMEG00000017981) #16	STN1 (ENSAMEG00000017971) #17	SH3PXD2A (ENSAMEG00000017966) #18	NEURL1 (ENSAMEG00000017960) #19	CALHM3 (ENSAMEG00000017958) #20	CALHM1 (ENSAMEG00000017956) #21	CALHM2 (ENSAMEG00000030260) #22	PDCD11 (ENSAMEG00000017935) #23	ATP5MK (ENSAMEG00000017934) #24	TAF5 (ENSAMEG00000017926) #25	PCGF6 (ENSAMEG00000017916) #26	INA (ENSAMEG00000023491) #27	NT5C2 (ENSAMEG00000017886) #29	CNNM2 (ENSAMEG00000017864) #30	BORCS7 (ENSAMEG00000017863) #32	CYP17A1 (ENSAMEG00000017838) #33	WBP1L (ENSAMEG00000030900) #34	SFXN2 (ENSAMEG00000017821) #35	ENSAMEG00000017816 #36	TRIM8 (ENSAMEG00000017812) #37	SUFU (ENSAMEG00000017809)	ACTR1A (ENSAMEG00000017796)
Canidae	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.e #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369.a #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00550000074855.u.a.a.b	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.e #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000160286.m	ENSGT00940000162369.a #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Dingo	MODERN SPECIES	165	ENSCAFG00020011608	SORCS3 (ENSCAFG00020011503) #8	CFAP58 (ENSCAFG00020011436) #9	GSTO2 (ENSCAFG00020011420) #11	GSTO1 (ENSCAFG00020011416) #12	ENSCAFG00020011414 #13	SFR1 (ENSCAFG00020011405) #14	COL17A1 (ENSCAFG00020011291) #15	SLK (ENSCAFG00020010676) #16	ENSCAFG00020010654	STN1 (ENSCAFG00020010650) #17	SH3PXD2A (ENSCAFG00020010641) #18	NEURL1 (ENSCAFG00020010626) #19	CALHM3 (ENSCAFG00020010618) #20	CALHM1 (ENSCAFG00020010614) #21	CALHM2 (ENSCAFG00020010612) #22	PDCD11 (ENSCAFG00020010369) #23	ENSCAFG00020010350 #24	TAF5 (ENSCAFG00020010331) #25	ENSCAFG00020010327	ENSCAFG00020010324 #26	INA (ENSCAFG00020010321) #27	ENSCAFG00020010320	NT5C2 (ENSCAFG00020010290) #29	CNNM2 (ENSCAFG00020010267) #30	AS3MT (ENSCAFG00020010265) #31	BORCS7 (ENSCAFG00020010264) #32	CYP17A1 (ENSCAFG00020010261) #33	WBP1L (ENSCAFG00020010258) #34	SFXN2 (ENSCAFG00020010254) #35	ARL3 (ENSCAFG00020010250) #36
Red fox	MODERN SPECIES		SORCS3 (ENSVVUG00000004978) #8	CFAP58 (ENSVVUG00000004840) #9	ITPRIP (ENSVVUG00000004832) #10	GSTO2 (ENSVVUG00000004830) #11	GSTO1 (ENSVVUG00000004800) #12	ENSVVUG00000004792	CFAP43 (ENSVVUG00000004764) #13	SFR1 (ENSVVUG00000004758) #14	COL17A1 (ENSVVUG00000004707) #15	SLK (ENSVVUG00000004650) #16	ENSVVUG00000004636 #17	SH3PXD2A (ENSVVUG00000004587) #18	NEURL1 (ENSVVUG00000004550) #19	CALHM3 (ENSVVUG00000004548) #20	CALHM1 (ENSVVUG00000004508) #21	CALHM2 (ENSVVUG00000004502) #22	PDCD11 (ENSVVUG00000004457) #23	ATP5MD (ENSVVUG00000004442) #24	TAF5 (ENSVVUG00000004406) #25	PCGF6 (ENSVVUG00000004391) #26	INA (ENSVVUG00000004387) #27	ENSVVUG00000004383	NT5C2 (ENSVVUG00000004366) #29	CNNM2 (ENSVVUG00000004323) #30	AS3MT (ENSVVUG00000004307) #31	BORCS7 (ENSVVUG00000004302) #32	CYP17A1 (ENSVVUG00000004262) #33	WBP1L (ENSVVUG00000004241) #34	SFXN2 (ENSVVUG00000004226) #35	ARL3 (ENSVVUG00000004222) #36	TRIM8 (ENSVVUG00000004218) #37
Felidae	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00980000200805	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Panthera	ANCESTRAL SPECIES	8	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
Panthera_a	ANCESTRAL SPECIES	9	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT01000000222030	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
leopard	MODERN SPECIES	33	SORCS1 (ENSPPRG00000009700) #7	SORCS3 (ENSPPRG00000013772) #8	CFAP58 (ENSPPRG00000014331) #9	GSTO2 (ENSPPRG00000018048) #11	GSTO1 (ENSPPRG00000022553) #12	ENSPPRG00000024492	CFAP43 (ENSPPRG00000023238) #13	SFR1 (ENSPPRG00000000336) #14	COL17A1 (ENSPPRG00000009059) #15	SLK (ENSPPRG00000009662) #16	STN1 (ENSPPRG00000010476) #17	SH3PXD2A (ENSPPRG00000011103) #18	NEURL1 (ENSPPRG00000011450) #19	CALHM3 (ENSPPRG00000011663) #20	CALHM1 (ENSPPRG00000011899) #21	CALHM2 (ENSPPRG00000012922) #22	PDCD11 (ENSPPRG00000015133) #23	ENSPPRG00000017518 #24	TAF5 (ENSPPRG00000019671) #25	PCGF6 (ENSPPRG00000021382) #26	INA (ENSPPRG00000000231) #27	ENSPPRG00000000418	ENSPPRG00000002375	NT5C2 (ENSPPRG00000002954) #29	CNNM2 (ENSPPRG00000003743) #30	AS3MT (ENSPPRG00000004722) #31	BORCS7 (ENSPPRG00000005710) #32	CYP17A1 (ENSPPRG00000006800) #33	WBP1L (ENSPPRG00000007200) #34	SFXN2 (ENSPPRG00000007450) #35	ARL3 (ENSPPRG00000007715) #36
lion	MODERN SPECIES	11	SORCS3 (ENSPLOG00000011869) #8	CFAP58 (ENSPLOG00000012343) #9	ITPRIP (ENSPLOG00000012530) #10	GSTO2 (ENSPLOG00000012574) #11	GSTO1 (ENSPLOG00000012757) #12	ENSPLOG00000012892	CFAP43 (ENSPLOG00000012959) #13	ENSPLOG00000013422 #14	COL17A1 (ENSPLOG00000013594) #15	SLK (ENSPLOG00000014691) #16	STN1 (ENSPLOG00000014905) #17	SH3PXD2A (ENSPLOG00000014989) #18	NEURL1 (ENSPLOG00000015278) #19	CALHM3 (ENSPLOG00000015347) #20	CALHM1 (ENSPLOG00000015393) #21	CALHM2 (ENSPLOG00000015425) #22	PDCD11 (ENSPLOG00000015561) #23	ENSPLOG00000016095 #24	TAF5 (ENSPLOG00000016129) #25	PCGF6 (ENSPLOG00000016170) #26	INA (ENSPLOG00000016317) #27	NT5C2 (ENSPLOG00000016374) #29	CNNM2 (ENSPLOG00000016463) #30	AS3MT (ENSPLOG00000016616) #31	BORCS7 (ENSPLOG00000016773) #32	CYP17A1 (ENSPLOG00000016900) #33	WBP1L (ENSPLOG00000017200) #34	SFXN2 (ENSPLOG00000017272) #35	ARL3 (ENSPLOG00000017326) #36	ENSPLOG00000017352	TRIM8 (ENSPLOG00000017378) #37
Tiger	MODERN SPECIES	136														CALHM3 (ENSPTIG00000012273) #20	CALHM1 (ENSPTIG00000012221) #21	CALHM2 (ENSPTIG00000011982) #22	PDCD11 (ENSPTIG00000011433) #23	ENSPTIG00000010699 #24	TAF5 (ENSPTIG00000010430) #25	ENSPTIG00000010232 #26	INA (ENSPTIG00000009953) #27	ENSPTIG00000009780	NT5C2 (ENSPTIG00000008167) #29	CNNM2 (ENSPTIG00000007177) #30	AS3MT (ENSPTIG00000005929) #31	BORCS7 (ENSPTIG00000005646) #32	CYP17A1 (ENSPTIG00000004247) #33	WBP1L (ENSPTIG00000002920) #34	SFXN2 (ENSPTIG00000000655) #35	ARL3 (ENSPTIG00000021020) #36	ENSPTIG00000005748
Cat	MODERN SPECIES	242	SORCS3 (ENSFCAG00000007482) #8	CFAP58 (ENSFCAG00000006024) #9	ITPRIP (ENSFCAG00000006023) #10	GSTO2 (ENSFCAG00000006022) #11	GSTO1 (ENSFCAG00000025597) #12	ENSFCAG00000041951	CFAP43 (ENSFCAG00000011533) #13	SFR1 (ENSFCAG00000028988) #14	COL17A1 (ENSFCAG00000004299) #15	SLK (ENSFCAG00000004298) #16	STN1 (ENSFCAG00000030378) #17	SH3PXD2A (ENSFCAG00000002390) #18	NEURL1 (ENSFCAG00000026091) #19	CALHM3 (ENSFCAG00000002388) #20	CALHM1 (ENSFCAG00000002387) #21	CALHM2 (ENSFCAG00000002386) #22	PDCD11 (ENSFCAG00000002384) #23	ENSFCAG00000002383 #24	TAF5 (ENSFCAG00000002382) #25	PCGF6 (ENSFCAG00000026427) #26	INA (ENSFCAG00000025885) #27	ENSFCAG00000037878	NT5C2 (ENSFCAG00000013705) #29	CNNM2 (ENSFCAG00000022183) #30	AS3MT (ENSFCAG00000030999) #31	ENSFCAG00000041677	CYP17A1 (ENSFCAG00000001254) #33	WBP1L (ENSFCAG00000042551) #34	ARL3 (ENSFCAG00000001251) #36	TRIM8 (ENSFCAG00000028572) #37	SUFU (ENSFCAG00000001249)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Chiroptera	ANCESTRAL SPECIES	6	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Megabat	MODERN SPECIES	1281			CFAP58 (ENSPVAG00000004213) #9	ITPRIP (ENSPVAG00000004212) #10	GSTO2 (ENSPVAG00000004210) #11	GSTO1 (ENSPVAG00000004209) #12	CFAP43 (ENSPVAG00000004205) #13	SFR1 (ENSPVAG00000004202) #14	COL17A1 (ENSPVAG00000004189) #15	SLK (ENSPVAG00000004188) #16	STN1 (ENSPVAG00000004187) #17	SH3PXD2A (ENSPVAG00000004186) #18	NEURL1 (ENSPVAG00000004185) #19	CALHM3 (ENSPVAG00000004183) #20	CALHM1 (ENSPVAG00000004182) #21	CALHM2 (ENSPVAG00000004181) #22	PDCD11 (ENSPVAG00000004176) #23	ATP5MK (ENSPVAG00000004175) #24	TAF5 (ENSPVAG00000004172) #25	PCGF6 (ENSPVAG00000004169) #26	INA (ENSPVAG00000004168) #27
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Greater horseshoe bat	MODERN SPECIES	7	SORCS1 (ENSRFEG00010012933) #7	SORCS3 (ENSRFEG00010014389) #8	CFAP58 (ENSRFEG00010014856) #9	ITPRIP (ENSRFEG00010015219) #10	GSTO2 (ENSRFEG00010015255) #11	GSTO1 (ENSRFEG00010015386) #12	CFAP43 (ENSRFEG00010015507) #13	SFR1 (ENSRFEG00010015584) #14	COL17A1 (ENSRFEG00010015674) #15	SLK (ENSRFEG00010015762) #16	STN1 (ENSRFEG00010015891) #17	SH3PXD2A (ENSRFEG00010015976) #18	NEURL1 (ENSRFEG00010016052) #19	CALHM3 (ENSRFEG00010016094) #20	CALHM1 (ENSRFEG00010016159) #21	CALHM2 (ENSRFEG00010016197) #22	PDCD11 (ENSRFEG00010016231) #23	ENSRFEG00010016305 #24	TAF5 (ENSRFEG00010016357) #25	PCGF6 (ENSRFEG00010016536) #26	ENSRFEG00010016624	INA (ENSRFEG00010016674) #27	ENSRFEG00010016714	NT5C2 (ENSRFEG00010016737) #29	CNNM2 (ENSRFEG00010016866) #30	BORCS7 (ENSRFEG00010016916) #32	CYP17A1 (ENSRFEG00010016955) #33	ENSRFEG00010017152	WBP1L (ENSRFEG00010017206) #34	SFXN2 (ENSRFEG00010017301) #35	ARL3 (ENSRFEG00010017354) #36
Equus	ANCESTRAL SPECIES	9	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Horse	MODERN SPECIES		ENSECAG00000054595	CFAP58 (ENSECAG00000019301) #9	ITPRIP (ENSECAG00000010108) #10	GSTO2 (ENSECAG00000058010) #11	ENSECAG00000038610	CFAP43 (ENSECAG00000021278) #13	GSTO1 (ENSECAG00000011560) #12	SFR1 (ENSECAG00000005386) #14	COL17A1 (ENSECAG00000007909) #15	SLK (ENSECAG00000010212) #16	STN1 (ENSECAG00000023477) #17	SH3PXD2A (ENSECAG00000009545) #18	NEURL1 (ENSECAG00000012870) #19	CALHM3 (ENSECAG00000019882) #20	CALHM1 (ENSECAG00000020482) #21	CALHM2 (ENSECAG00000020495) #22	PDCD11 (ENSECAG00000020507) #23	ENSECAG00000028196 #24	TAF5 (ENSECAG00000005853) #25	PCGF6 (ENSECAG00000017183) #26	NT5C2 (ENSECAG00000022574) #29	INA (ENSECAG00000032667) #27	CNNM2 (ENSECAG00000018159) #30	AS3MT (ENSECAG00000018722) #31	ENSECAG00000047543 #32	CYP17A1 (ENSECAG00000010022) #33	WBP1L (ENSECAG00000024142) #34	SFXN2 (ENSECAG00000024231) #35	ARL3 (ENSECAG00000000300) #36	TRIM8 (ENSECAG00000016770) #37	SUFU (ENSECAG00000019583)
Donkey	DUPLICATION
Donkey	MODERN SPECIES	11	ITPRIP (ENSEASG00005035607) #10	GSTO2 (ENSEASG00005015054) #11	CFAP43 (ENSEASG00005023632) #13	GSTO1 (ENSEASG00005015056) #12	SFR1 (ENSEASG00005015065) #14	ENSEASG00005038642	COL17A1 (ENSEASG00005015077) #15	SLK (ENSEASG00005015130) #16	STN1 (ENSEASG00005015134) #17	SH3PXD2A (ENSEASG00005015136) #18	NEURL1 (ENSEASG00005015146) #19	CALHM3 (ENSEASG00005031203) #20	ENSEASG00005028407 #21	ENSEASG00005034926 #22	ENSEASG00005015151 #21	ENSEASG00005027410 #22	PDCD11 (ENSEASG00005015159) #23	ENSEASG00005015170 #24	TAF5 (ENSEASG00005034630) #25	PCGF6 (ENSEASG00005015173) #26	INA (ENSEASG00005015178) #27	NT5C2 (ENSEASG00005015183) #29	CNNM2 (ENSEASG00005015189) #30	AS3MT (ENSEASG00005015193) #31	BORCS7 (ENSEASG00005032646) #32	ENSEASG00005035755	CYP17A1 (ENSEASG00005015197) #33	WBP1L (ENSEASG00005015198) #34	SFXN2 (ENSEASG00005015206) #35	ARL3 (ENSEASG00005037451) #36	TRIM8 (ENSEASG00005015212) #37
Donkey	MODERN SPECIES	11	ENSEASG00005015044	CFAP58 (ENSEASG00005015046) #9	ITPRIP (ENSEASG00005035607) #10	GSTO2 (ENSEASG00005015054) #11	CFAP43 (ENSEASG00005023632) #13	GSTO1 (ENSEASG00005015056) #12	SFR1 (ENSEASG00005015065) #14	ENSEASG00005038642	COL17A1 (ENSEASG00005015077) #15	SLK (ENSEASG00005015130) #16	STN1 (ENSEASG00005015134) #17	SH3PXD2A (ENSEASG00005015136) #18	NEURL1 (ENSEASG00005015146) #19	CALHM3 (ENSEASG00005031203) #20	ENSEASG00005028407 #21	ENSEASG00005034926 #22	ENSEASG00005015151 #21	ENSEASG00005027410 #22	PDCD11 (ENSEASG00005015159) #23	ENSEASG00005015170 #24	TAF5 (ENSEASG00005034630) #25	PCGF6 (ENSEASG00005015173) #26	INA (ENSEASG00005015178) #27	NT5C2 (ENSEASG00005015183) #29	CNNM2 (ENSEASG00005015189) #30	AS3MT (ENSEASG00005015193) #31	BORCS7 (ENSEASG00005032646) #32	ENSEASG00005035755	CYP17A1 (ENSEASG00005015197) #33	WBP1L (ENSEASG00005015198) #34	SFXN2 (ENSEASG00005015206) #35
Eulipotyphla	ANCESTRAL SPECIES	104															ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	13366																ENSSARG00000002084 #22
Common shrew	MODERN SPECIES	8365																ENSSARG00000000887 #22
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	10813																ENSSARG00000014160 #22
Common shrew	MODERN SPECIES	11615																ENSSARG00000009219 #22
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	13292																ENSSARG00000000255 #22
Common shrew	MODERN SPECIES	9297																ENSSARG00000006790 #22
Common shrew	MODERN SPECIES	7470																ENSSARG00000006885 #22
Common shrew	MODERN SPECIES	13021																ENSSARG00000006990 #22
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	13377																ENSSARG00000008524 #22
Common shrew	MODERN SPECIES	10352																ENSSARG00000004349 #22
Common shrew	MODERN SPECIES	13278																ENSSARG00000010853 #22
Common shrew	MODERN SPECIES	8398																ENSSARG00000000860 #22
Common shrew	MODERN SPECIES	13426																ENSSARG00000003059 #22
Common shrew	MODERN SPECIES	7030															ENSSARG00000013675 #20	ENSSARG00000013674 #22
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	12017																ENSSARG00000002159 #22
Common shrew	MODERN SPECIES	8812																ENSSARG00000002110 #22
Common shrew	MODERN SPECIES	8186																ENSSARG00000007781 #22
Common shrew	MODERN SPECIES	10604																ENSSARG00000007075 #22
Common shrew	MODERN SPECIES	13540																ENSSARG00000009703 #22
Common shrew	MODERN SPECIES	7952																ENSSARG00000010700 #22
Common shrew	MODERN SPECIES	11578																ENSSARG00000004681 #22
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	13342																ENSSARG00000014117 #22
Common shrew	MODERN SPECIES	8557																ENSSARG00000012953 #22
Common shrew	MODERN SPECIES	13354																ENSSARG00000002922 #22
Common shrew	MODERN SPECIES	7049																ENSSARG00000000611 #22	ENSSARG00000000599 #20
Common shrew	MODERN SPECIES	7964																ENSSARG00000010800 #22
Common shrew	MODERN SPECIES	6527																ENSSARG00000002619 #22	PDCD11 (ENSSARG00000002540) #23	ENSSARG00000002525 #24	ENSSARG00000002469	ENSSARG00000002404 #25
Hedgehog	MODERN SPECIES	4500															CALHM1 (ENSEEUG00000010016) #21	CALHM2 (ENSEEUG00000009955) #22	ENSEEUG00000009753	PDCD11 (ENSEEUG00000009245) #23	ATP5MK (ENSEEUG00000009230) #24	TAF5 (ENSEEUG00000009047) #25
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Xenarthra	ANCESTRAL SPECIES	61												ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Armadillo	MODERN SPECIES	3168												SH3PXD2A (ENSDNOG00000049739) #18	NEURL1 (ENSDNOG00000040304) #19	CALHM3 (ENSDNOG00000009406) #20	CALHM1 (ENSDNOG00000013901) #21	CALHM2 (ENSDNOG00000013897) #22	PDCD11 (ENSDNOG00000013838) #23	ATP5MK (ENSDNOG00000013833) #24	TAF5 (ENSDNOG00000035792) #25	PCGF6 (ENSDNOG00000034623) #26	INA (ENSDNOG00000002852) #27	NT5C2 (ENSDNOG00000000151) #29	ENSDNOG00000000149 #30
Afrotheria	ANCESTRAL SPECIES	4	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Tenrec	MODERN SPECIES	4357																CALHM2 (ENSETEG00000000825) #22	ENSETEG00000000823	PDCD11 (ENSETEG00000000813) #23
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Elephant	MODERN SPECIES	3	SORCS3 (ENSLAFG00000009226) #8	CFAP58 (ENSLAFG00000010295) #9	ITPRIP (ENSLAFG00000001113) #10	GSTO2 (ENSLAFG00000000236) #11	GSTO1 (ENSLAFG00000022681) #12	ENSLAFG00000027860 #13	ENSLAFG00000000231 #13	SFR1 (ENSLAFG00000000228) #14	COL17A1 (ENSLAFG00000011870) #15	SLK (ENSLAFG00000011452) #16	STN1 (ENSLAFG00000004232) #17	SH3PXD2A (ENSLAFG00000022244) #18	NEURL1 (ENSLAFG00000015401) #19	CALHM3 (ENSLAFG00000026450) #20	CALHM1 (ENSLAFG00000008404) #21	CALHM2 (ENSLAFG00000008403) #22	PDCD11 (ENSLAFG00000008398) #23	ATP5MK (ENSLAFG00000008395) #24	TAF5 (ENSLAFG00000008391) #25	PCGF6 (ENSLAFG00000008386) #26	INA (ENSLAFG00000008383) #27	NT5C2 (ENSLAFG00000012056) #29	CNNM2 (ENSLAFG00000012051) #30	AS3MT (ENSLAFG00000012045) #31	ENSLAFG00000020646 #32	CYP17A1 (ENSLAFG00000002044) #33	WBP1L (ENSLAFG00000002043) #34	SFXN2 (ENSLAFG00000005072) #35	ARL3 (ENSLAFG00000005070) #36	TRIM8 (ENSLAFG00000011454) #37	SUFU (ENSLAFG00000005068)
Hyrax	MODERN SPECIES	4141																ENSPCAG00000011970 #22	PDCD11 (ENSPCAG00000011663) #23	ATP5MK (ENSPCAG00000011645) #24	TAF5 (ENSPCAG00000011556) #25	PCGF6 (ENSPCAG00000011491) #26
Marsupialia	ANCESTRAL SPECIES		ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r.a #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000156478.k.b	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.cc #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
koala	MODERN SPECIES	6														CALHM3 (ENSPCIG00000024475) #20	CALHM1 (ENSPCIG00000001165) #21	CALHM2 (ENSPCIG00000036143) #22	PDCD11 (ENSPCIG00000001118) #23	ENSPCIG00000001100 #24	TAF5 (ENSPCIG00000001090) #25	PCGF6 (ENSPCIG00000028313) #26	INA (ENSPCIG00000028312) #27	ENSPCIG00000028855	CNNM2 (ENSPCIG00000028980) #30	BORCS7 (ENSPCIG00000018033) #32	ENSPCIG00000018032 #33	WBP1L (ENSPCIG00000018031) #34	ARL3 (ENSPCIG00000028982) #36	TRIM8 (ENSPCIG00000028984) #37	SUFU (ENSPCIG00000028985)	ACTR1A (ENSPCIG00000028989)	MFSD13A (ENSPCIG00000028991)
Common wonbat	MODERN SPECIES	581	CFAP58 (ENSVURG00010025055) #9	ITPRIP (ENSVURG00010025056) #10	ENSVURG00010025057 #12	ENSVURG00010025058 #13	ENSVURG00010025059 #14	ENSVURG00010025060 #12	ENSVURG00010000168 #13	ENSVURG00010000325	ENSVURG00010000337	SLK (ENSVURG00010000384) #16	STN1 (ENSVURG00010000526) #17	SH3PXD2A (ENSVURG00010000566) #18	NEURL1 (ENSVURG00010000653) #19	CALHM3 (ENSVURG00010000669) #20	CALHM1 (ENSVURG00010000699) #21	CALHM2 (ENSVURG00010000704) #22	PDCD11 (ENSVURG00010000713) #23	ENSVURG00010000772 #24	TAF5 (ENSVURG00010000796) #25	PCGF6 (ENSVURG00010000868) #26	INA (ENSVURG00010000939) #27	ENSVURG00010000957	CNNM2 (ENSVURG00010001013) #30	BORCS7 (ENSVURG00010001049) #32	CYP17A1 (ENSVURG00010001081) #33	WBP1L (ENSVURG00010001384) #34	SFXN2 (ENSVURG00010001410) #35	ARL3 (ENSVURG00010001426) #36	TRIM8 (ENSVURG00010001450) #37	SUFU (ENSVURG00010001480)	ACTR1A (ENSVURG00010001535)
Wallaby	MODERN SPECIES	5559																CALHM2 (ENSMEUG00000013769) #22	ENSMEUG00000013719 #23	ATP5MK (ENSMEUG00000013711) #24	TAF5 (ENSMEUG00000013690) #25
Tasmanian devil	MODERN SPECIES	1	SORCS3 (ENSSHAG00000012191) #8	CFAP58 (ENSSHAG00000016014) #9	ITPRIP (ENSSHAG00000022665) #10	ENSSHAG00000016340 #12	ENSSHAG00000016427 #13	ENSSHAG00000027679 #14	ENSSHAG00000016910 #13	ENSSHAG00000022398 #12	ENSSHAG00000017266	ENSSHAG00000017376 #16	STN1 (ENSSHAG00000017550) #17	SH3PXD2A (ENSSHAG00000017659) #18	NEURL1 (ENSSHAG00000018064) #19	CALHM3 (ENSSHAG00000018221) #20	CALHM1 (ENSSHAG00000025980) #21	CALHM2 (ENSSHAG00000022456) #22	PDCD11 (ENSSHAG00000018258) #23	ENSSHAG00000018296 #25	PCGF6 (ENSSHAG00000023796) #26	INA (ENSSHAG00000018358) #27	ENSSHAG00000018477	CNNM2 (ENSSHAG00000018509) #30	CYP17A1 (ENSSHAG00000018660) #33	BORCS7 (ENSSHAG00000018650) #32	WBP1L (ENSSHAG00000018684) #34	ENSSHAG00000018726 #35	ARL3 (ENSSHAG00000018738) #36	TRIM8 (ENSSHAG00000031236) #37	SUFU (ENSSHAG00000018777)	ACTR1A (ENSSHAG00000018823)	MFSD13A (ENSSHAG00000018826)
Opossum	MODERN SPECIES		SORCS3 (ENSMODG00000010798) #8	CFAP58 (ENSMODG00000010828) #9	ITPRIP (ENSMODG00000024804) #10	ENSMODG00000010839 #12	ENSMODG00000010896 #13	ENSMODG00000010902 #14	ENSMODG00000045729 #12	ENSMODG00000010881 #13	ENSMODG00000010961	SLK (ENSMODG00000010985) #16	SH3PXD2A (ENSMODG00000011016) #18	NEURL1 (ENSMODG00000011020) #19	CALHM3 (ENSMODG00000011027) #20	CALHM1 (ENSMODG00000011033) #21	ENSMODG00000038510	CALHM2 (ENSMODG00000011040) #22	PDCD11 (ENSMODG00000011077) #23	ATP5MK (ENSMODG00000025729) #24	TAF5 (ENSMODG00000011095) #25	PCGF6 (ENSMODG00000011120) #26	INA (ENSMODG00000011125) #27	ENSMODG00000011153	CNNM2 (ENSMODG00000011165) #30	BORCS7 (ENSMODG00000039361) #32	ENSMODG00000011205 #33	WBP1L (ENSMODG00000044404) #34	SFXN2 (ENSMODG00000011216) #35	ENSMODG00000011224 #36	TRIM8 (ENSMODG00000011232) #37	SUFU (ENSMODG00000011242)	ACTR1A (ENSMODG00000011256)
Platypus	MODERN SPECIES	7	XPNPEP1 (ENSOANG00000001602)	SORCS1 (ENSOANG00000001604) #7	SORCS3 (ENSOANG00000001606) #8	CFAP58 (ENSOANG00000001608) #9	ITPRIP (ENSOANG00000001611) #10	GSTO1 (ENSOANG00000049378) #12	CFAP43 (ENSOANG00000001619) #13	ENSOANG00000048592 #14	ENSOANG00000001623	SLK (ENSOANG00000010956) #16	STN1 (ENSOANG00000041497) #17	SH3PXD2A (ENSOANG00000001630) #18	NEURL1 (ENSOANG00000001631) #19	CALHM3 (ENSOANG00000001633) #20	CALHM1 (ENSOANG00000001634) #21	CALHM2 (ENSOANG00000043354) #22	PDCD11 (ENSOANG00000001636) #23	ATP5MK (ENSOANG00000020153) #24	TAF5 (ENSOANG00000001637) #25	PCGF6 (ENSOANG00000001639) #26	ENSOANG00000001640	CNNM2 (ENSOANG00000001643) #30	ENSOANG00000001644 #31	ENSOANG00000051063	BORCS7 (ENSOANG00000001647) #32	CYP17A1 (ENSOANG00000040450) #33	WBP1L (ENSOANG00000001648) #34	SFXN2 (ENSOANG00000001649) #35	ARL3 (ENSOANG00000001653) #36	TRIM8 (ENSOANG00000001654) #37	SUFU (ENSOANG00000001655)
Sauria	ANCESTRAL SPECIES	8	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Episquamata	ANCESTRAL SPECIES	2	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Laterata	ANCESTRAL SPECIES		ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Common wall lizard	MODERN SPECIES	13	CFAP58 (ENSPMRG00000003628) #9	ITPRIP (ENSPMRG00000003681) #10	GSTO1 (ENSPMRG00000003685) #12	CFAP43 (ENSPMRG00000003694) #13	SFR1 (ENSPMRG00000003720) #14	ENSPMRG00000003723	ENSPMRG00000003725	ENSPMRG00000003729	SLK (ENSPMRG00000003737) #16	STN1 (ENSPMRG00000003752) #17	SH3PXD2A (ENSPMRG00000003762) #18	ENSPMRG00000003770 #19	NEURL1 (ENSPMRG00000003774) #19	CALHM3 (ENSPMRG00000003782) #20	CALHM1 (ENSPMRG00000003784) #21	CALHM2 (ENSPMRG00000003787) #22	PDCD11 (ENSPMRG00000003794) #23	ENSPMRG00000003807	TAF5 (ENSPMRG00000003816) #25	PCGF6 (ENSPMRG00000003838) #26	INA (ENSPMRG00000003841) #27	ENSPMRG00000003857	CNNM2 (ENSPMRG00000003889) #30	AS3MT (ENSPMRG00000003894) #31	CYP17A1 (ENSPMRG00000003910) #33	WBP1L (ENSPMRG00000003937) #34	SFXN2 (ENSPMRG00000003945) #35	ARL3 (ENSPMRG00000003951) #36	TRIM8 (ENSPMRG00000003954) #37	ENSPMRG00000003961	ENSPMRG00000003967
Argentine black and white tegu	MODERN SPECIES	48	ENSSMRG00000009049	ENSSMRG00000008972	SORCS1 (ENSSMRG00000007831) #7	ENSSMRG00000007793 #8	CFAP58 (ENSSMRG00000007769) #9	GSTO1 (ENSSMRG00000007742) #12	CFAP43 (ENSSMRG00000007729) #13	SFR1 (ENSSMRG00000007728) #14	COL17A1 (ENSSMRG00000007725) #15	SLK (ENSSMRG00000007721) #16	STN1 (ENSSMRG00000007719) #17	SH3PXD2A (ENSSMRG00000007713) #18	NEURL1 (ENSSMRG00000007702) #19	CALHM3 (ENSSMRG00000007700) #20	CALHM1 (ENSSMRG00000007696) #21	CALHM2 (ENSSMRG00000007689) #22	PDCD11 (ENSSMRG00000007373) #23	ENSSMRG00000007366	TAF5 (ENSSMRG00000007365) #25	PCGF6 (ENSSMRG00000007357) #26	INA (ENSSMRG00000007346) #27	ENSSMRG00000007327	CNNM2 (ENSSMRG00000007300) #30	AS3MT (ENSSMRG00000007298) #31	CYP17A1 (ENSSMRG00000007206) #33	BORCS7 (ENSSMRG00000007198) #32	WBP1L (ENSSMRG00000007196) #34	SFXN2 (ENSSMRG00000007184) #35	ARL3 (ENSSMRG00000007182) #36	TRIM8 (ENSSMRG00000007177) #37	SUFU (ENSSMRG00000007169)
Toxicofera	ANCESTRAL SPECIES	2	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00940000155588.b.u #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Elapidae	ANCESTRAL SPECIES	4	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.p #12	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00940000155588.b.u #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Elapidae_a	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.p #12	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747	ENSGT00940000155782
Mainland tiger snake	MODERN SPECIES		XPNPEP1 (ENSNSUG00000004851)	SORCS1 (ENSNSUG00000005013) #7	SORCS3 (ENSNSUG00000005046) #8	ENSNSUG00000005077	ITPRIP (ENSNSUG00000005078) #10	GSTO1 (ENSNSUG00000005079) #12	ENSNSUG00000005146 #13	SFR1 (ENSNSUG00000005147) #14	ENSNSUG00000005149	SLK (ENSNSUG00000005155) #16	STN1 (ENSNSUG00000005927) #17	SH3PXD2A (ENSNSUG00000006039) #18	NEURL1 (ENSNSUG00000006040) #19	CALHM3 (ENSNSUG00000006054) #20	CALHM1 (ENSNSUG00000006055) #21	CALHM2 (ENSNSUG00000006056) #22	PDCD11 (ENSNSUG00000006057) #23	ENSNSUG00000006296	TAF5 (ENSNSUG00000006297) #25	ENSNSUG00000006298 #26	ENSNSUG00000006299 #26	INA (ENSNSUG00000006300) #27	ENSNSUG00000006332	CNNM2 (ENSNSUG00000006339) #30	BORCS7 (ENSNSUG00000006370) #32	CYP17A1 (ENSNSUG00000006374) #33	WBP1L (ENSNSUG00000006455) #34	SFXN2 (ENSNSUG00000006456) #35	ARL3 (ENSNSUG00000006546) #36	TRIM8 (ENSNSUG00000006547) #37	SUFU (ENSNSUG00000006548)
Eastern brown snake	MODERN SPECIES	25	SORCS3 (ENSPTXG00000001273) #8	ENSPTXG00000001203	ENSPTXG00000001198 #9	ITPRIP (ENSPTXG00000001196) #10	GSTO1 (ENSPTXG00000001192) #12	ENSPTXG00000001183 #13	ENSPTXG00000001172 #13	SFR1 (ENSPTXG00000001166) #14	ENSPTXG00000001161	SLK (ENSPTXG00000001147) #16	STN1 (ENSPTXG00000001053) #17	SH3PXD2A (ENSPTXG00000001038) #18	NEURL1 (ENSPTXG00000001034) #19	CALHM3 (ENSPTXG00000001030) #20	CALHM1 (ENSPTXG00000001028) #21	CALHM2 (ENSPTXG00000001025) #22	PDCD11 (ENSPTXG00000000924) #23	ENSPTXG00000000883	TAF5 (ENSPTXG00000000881) #25	PCGF6 (ENSPTXG00000000878) #26	INA (ENSPTXG00000000859) #27	ENSPTXG00000000856	CNNM2 (ENSPTXG00000000855) #30	BORCS7 (ENSPTXG00000000854) #32	CYP17A1 (ENSPTXG00000000602) #33	WBP1L (ENSPTXG00000000567) #34	SFXN2 (ENSPTXG00000000558) #35	ARL3 (ENSPTXG00000000545) #36	TRIM8 (ENSPTXG00000000536) #37	SUFU (ENSPTXG00000000522)	ACTR1A (ENSPTXG00000000511)
Blue-lipped sea krait	MODERN SPECIES	4528																CALHM2 (ENSLLTG00000004035) #22	PDCD11 (ENSLLTG00000004108) #23
Indian cobra	MODERN SPECIES	3	SORCS1 (ENSNNAG00000011948) #7	SORCS3 (ENSNNAG00000013056) #8	CFAP58 (ENSNNAG00000013309) #9	ITPRIP (ENSNNAG00000013441) #10	ENSNNAG00000013459 #12	ENSNNAG00000013626 #12	CFAP43 (ENSNNAG00000013647) #13	SFR1 (ENSNNAG00000013731) #14	ENSNNAG00000013739	SLK (ENSNNAG00000013794) #16	STN1 (ENSNNAG00000013991) #17	SH3PXD2A (ENSNNAG00000014011) #18	NEURL1 (ENSNNAG00000014090) #19	CALHM3 (ENSNNAG00000014121) #20	CALHM1 (ENSNNAG00000014135) #21	CALHM2 (ENSNNAG00000014158) #22	PDCD11 (ENSNNAG00000014210) #23	ENSNNAG00000014447	TAF5 (ENSNNAG00000014456) #25	PCGF6 (ENSNNAG00000014483) #26	INA (ENSNNAG00000014506) #27	ENSNNAG00000014527	CNNM2 (ENSNNAG00000014688) #30	BORCS7 (ENSNNAG00000014735) #32	ENSNNAG00000014755 #33	ENSNNAG00000014782 #33	WBP1L (ENSNNAG00000014802) #34	SFXN2 (ENSNNAG00000014833) #35	ARL3 (ENSNNAG00000014865) #36	TRIM8 (ENSNNAG00000014881) #37	SUFU (ENSNNAG00000014922)
Lizard	MODERN SPECIES	2	SORCS1 (ENSACAG00000006446) #7	ENSACAG00000037409	SORCS3 (ENSACAG00000005234) #8	CFAP58 (ENSACAG00000005225) #9	ITPRIP (ENSACAG00000005224) #10	ENSACAG00000005210 #12	CFAP43 (ENSACAG00000005165) #13	SFR1 (ENSACAG00000037852) #14	ENSACAG00000005136	SLK (ENSACAG00000004988) #16	STN1 (ENSACAG00000004954) #17	SH3PXD2A (ENSACAG00000004932) #18	NEURL1 (ENSACAG00000004920) #19	CALHM3 (ENSACAG00000004919) #20	CALHM1 (ENSACAG00000008401) #21	CALHM2 (ENSACAG00000004916) #22	PDCD11 (ENSACAG00000004796) #23	ENSACAG00000044621	TAF5 (ENSACAG00000004756) #25	PCGF6 (ENSACAG00000029126) #26	ENSACAG00000004712 #27	ENSACAG00000004601	ENSACAG00000042108	CNNM2 (ENSACAG00000004555) #30	AS3MT (ENSACAG00000029427) #31	BORCS7 (ENSACAG00000042978) #32	ENSACAG00000043026 #33	ENSACAG00000004350 #33	WBP1L (ENSACAG00000040095) #34	SFXN2 (ENSACAG00000004270) #35	ENSACAG00000036316
tuatara	MODERN SPECIES	1056												SH3PXD2A (ENSSPUG00000010795) #18	NEURL1 (ENSSPUG00000010823) #19	CALHM3 (ENSSPUG00000010832) #20	CALHM1 (ENSSPUG00000010841) #21	CALHM2 (ENSSPUG00000010854) #22	ENSSPUG00000010908	PCGF6 (ENSSPUG00000010948) #26	INA (ENSSPUG00000010955) #27	ENSSPUG00000010969	CNNM2 (ENSSPUG00000011002) #30	AS3MT (ENSSPUG00000011056) #31	BORCS7 (ENSSPUG00000011069) #32	CYP17A1 (ENSSPUG00000011092) #33	WBP1L (ENSSPUG00000011131) #34	SFXN2 (ENSSPUG00000011143) #35	ARL3 (ENSSPUG00000011154) #36	TRIM8 (ENSSPUG00000011167) #37	SUFU (ENSSPUG00000011181)	ACTR1A (ENSSPUG00000011211)	MFSD13A (ENSSPUG00000011253)
Archelosauria	ANCESTRAL SPECIES	10	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Three-toed box turtle	MODERN SPECIES	39	SORCS1 (ENSTMTG00000004623) #7	SORCS3 (ENSTMTG00000004223) #8	CFAP58 (ENSTMTG00000004140) #9	ITPRIP (ENSTMTG00000004126) #10	GSTO1 (ENSTMTG00000004095) #12	SFR1 (ENSTMTG00000004085) #14	ENSTMTG00000004055 #13	ENSTMTG00000003970 #13	ENSTMTG00000003930	SLK (ENSTMTG00000003888) #16	STN1 (ENSTMTG00000003849) #17	SH3PXD2A (ENSTMTG00000003816) #18	NEURL1 (ENSTMTG00000003710) #19	CALHM3 (ENSTMTG00000003689) #20	CALHM1 (ENSTMTG00000003677) #21	CALHM2 (ENSTMTG00000003669) #22	PDCD11 (ENSTMTG00000003588) #23	ENSTMTG00000003574	TAF5 (ENSTMTG00000003542) #25	ENSTMTG00000003510	PCGF6 (ENSTMTG00000003473) #26	INA (ENSTMTG00000003452) #27	ENSTMTG00000003377	CNNM2 (ENSTMTG00000003262) #30	AS3MT (ENSTMTG00000003237) #31	BORCS7 (ENSTMTG00000003229) #32	CYP17A1 (ENSTMTG00000003197) #33	WBP1L (ENSTMTG00000003185) #34	SFXN2 (ENSTMTG00000003157) #35	ARL3 (ENSTMTG00000003142) #36	TRIM8 (ENSTMTG00000003124) #37
painted turtle	MODERN SPECIES	2388	ENSCPBG00000024360	ENSCPBG00000024362	SORCS3 (ENSCPBG00000024367) #8	CFAP58 (ENSCPBG00000024380) #9	ITPRIP (ENSCPBG00000024382) #10	GSTO1 (ENSCPBG00000024383) #12	CFAP43 (ENSCPBG00000024387) #13	SFR1 (ENSCPBG00000024393) #14	ENSCPBG00000024394	SLK (ENSCPBG00000024408) #16	STN1 (ENSCPBG00000024481) #17	SH3PXD2A (ENSCPBG00000024482) #18	NEURL1 (ENSCPBG00000024483) #19	CALHM3 (ENSCPBG00000024484) #20	CALHM1 (ENSCPBG00000024485) #21	CALHM2 (ENSCPBG00000024486) #22	PDCD11 (ENSCPBG00000024487) #23	ENSCPBG00000024490	TAF5 (ENSCPBG00000024491) #25	PCGF6 (ENSCPBG00000024492) #26	INA (ENSCPBG00000024493) #27	ENSCPBG00000024494	CNNM2 (ENSCPBG00000024495) #30	AS3MT (ENSCPBG00000024496) #31	BORCS7 (ENSCPBG00000024497) #32	CYP17A1 (ENSCPBG00000024499) #33	WBP1L (ENSCPBG00000024501) #34	SFXN2 (ENSCPBG00000002343) #35	ARL3 (ENSCPBG00000002364) #36	TRIM8 (ENSCPBG00000002376) #37	SUFU (ENSCPBG00000002443)
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Goode s thornscrub tortoise	MODERN SPECIES	21	SORCS1 (ENSGEVG00005011892) #7	SORCS3 (ENSGEVG00005011304) #8	ENSGEVG00005011234	CFAP58 (ENSGEVG00005011051) #9	ITPRIP (ENSGEVG00005011019) #10	GSTO1 (ENSGEVG00005010997) #12	CFAP43 (ENSGEVG00005010554) #13	SFR1 (ENSGEVG00005010464) #14	ENSGEVG00005010362	SLK (ENSGEVG00005010221) #16	STN1 (ENSGEVG00005010129) #17	SH3PXD2A (ENSGEVG00005009971) #18	NEURL1 (ENSGEVG00005009893) #19	CALHM3 (ENSGEVG00005009849) #20	CALHM1 (ENSGEVG00005009808) #21	CALHM2 (ENSGEVG00005009777) #22	PDCD11 (ENSGEVG00005009591) #23	ENSGEVG00005009520	TAF5 (ENSGEVG00005009475) #25	PCGF6 (ENSGEVG00005009433) #26	INA (ENSGEVG00005009390) #27	ENSGEVG00005009185	CNNM2 (ENSGEVG00005005911) #30	AS3MT (ENSGEVG00005005861) #31	BORCS7 (ENSGEVG00005005827) #32	CYP17A1 (ENSGEVG00005005795) #33	WBP1L (ENSGEVG00005005761) #34	SFXN2 (ENSGEVG00005005736) #35	ARL3 (ENSGEVG00005005712) #36	TRIM8 (ENSGEVG00005005694) #37	SUFU (ENSGEVG00005005469)
Abingdon island giant tortoise	MODERN SPECIES	1141							ENSCABG00000012803	SFR1 (ENSCABG00000012800) #14	ENSCABG00000012797	SLK (ENSCABG00000012791) #16	STN1 (ENSCABG00000012694) #17	SH3PXD2A (ENSCABG00000012673) #18	NEURL1 (ENSCABG00000012663) #19	CALHM3 (ENSCABG00000012660) #20	CALHM1 (ENSCABG00000012656) #21	CALHM2 (ENSCABG00000012652) #22	PDCD11 (ENSCABG00000012639) #23	ENSCABG00000012631	TAF5 (ENSCABG00000012628) #25	PCGF6 (ENSCABG00000012625) #26	INA (ENSCABG00000012623) #27	ENSCABG00000012619	CNNM2 (ENSCABG00000012617) #30
Chinese turtle	MODERN SPECIES	893												SH3PXD2A (ENSPSIG00000005648) #18	NEURL1 (ENSPSIG00000005417) #19	CALHM3 (ENSPSIG00000005389) #20	CALHM1 (ENSPSIG00000005362) #21	CALHM2 (ENSPSIG00000005351) #22	PDCD11 (ENSPSIG00000005102) #23	ENSPSIG00000005062	TAF5 (ENSPSIG00000004990) #25	ENSPSIG00000000552	PCGF6 (ENSPSIG00000004981) #26	ENSPSIG00000004644	ENSPSIG00000004641	CNNM2 (ENSPSIG00000004321) #30	AS3MT (ENSPSIG00000004098) #31	CYP17A1 (ENSPSIG00000003991) #33	WBP1L (ENSPSIG00000003977) #34	ARL3 (ENSPSIG00000003938) #36	SFXN2 (ENSPSIG00000003923) #35	TRIM8 (ENSPSIG00000003881) #37	SUFU (ENSPSIG00000003710)
Archosauria	ANCESTRAL SPECIES	7	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Aves	ANCESTRAL SPECIES	6	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Neognathae	ANCESTRAL SPECIES	7	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Anatidae	ANCESTRAL SPECIES	4	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00880000138014.b.i	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Pink-footed goose	MODERN SPECIES	11	SORCS1 (ENSABRG00000006509) #7	ENSABRG00000006569	SORCS3 (ENSABRG00000006638) #8	CFAP58 (ENSABRG00000007070) #9	ITPRIP (ENSABRG00000007102) #10	GSTO1 (ENSABRG00000007104) #12	CFAP43 (ENSABRG00000007106) #13	SFR1 (ENSABRG00000007118) #14	COL17A1 (ENSABRG00000007126) #15	SLK (ENSABRG00000007148) #16	STN1 (ENSABRG00000007161) #17	SH3PXD2A (ENSABRG00000007174) #18	NEURL1 (ENSABRG00000007194) #19	CALHM3 (ENSABRG00000007209) #20	CALHM1 (ENSABRG00000007212) #21	CALHM2 (ENSABRG00000007215) #22	PDCD11 (ENSABRG00000007218) #23	ENSABRG00000007233	TAF5 (ENSABRG00000007239) #25	PCGF6 (ENSABRG00000007251) #26	INA (ENSABRG00000007311) #27	ENSABRG00000007316	CNNM2 (ENSABRG00000007326) #30	AS3MT (ENSABRG00000007335) #31	BORCS7 (ENSABRG00000007354) #32	CYP17A1 (ENSABRG00000007357) #33	WBP1L (ENSABRG00000007376) #34	SFXN2 (ENSABRG00000007382) #35	ARL3 (ENSABRG00000007391) #36	TRIM8 (ENSABRG00000007399) #37	SUFU (ENSABRG00000007415)
Duck	MODERN SPECIES	24	XPNPEP1 (ENSAPLG00000013402)	SORCS1 (ENSAPLG00000004914) #7	ENSAPLG00000005363	ENSAPLG00000017158 #8	CFAP58 (ENSAPLG00000005743) #9	ITPRIP (ENSAPLG00000005949) #10	CFAP43 (ENSAPLG00000006084) #13	SFR1 (ENSAPLG00000016782) #14	COL17A1 (ENSAPLG00000006175) #15	SLK (ENSAPLG00000006212) #16	STN1 (ENSAPLG00000006661) #17	SH3PXD2A (ENSAPLG00000006691) #18	NEURL1 (ENSAPLG00000006704) #19	CALHM3 (ENSAPLG00000015563) #20	CALHM1 (ENSAPLG00000010081) #21	CALHM2 (ENSAPLG00000019475) #22	PDCD11 (ENSAPLG00000010301) #23	ENSAPLG00000019499	TAF5 (ENSAPLG00000011406) #25	PCGF6 (ENSAPLG00000026176) #26	ENSAPLG00000027671 #27	ENSAPLG00000018565 #27	ENSAPLG00000023786 #29	CNNM2 (ENSAPLG00000013829) #30	BORCS7 (ENSAPLG00000004416) #32	CYP17A1 (ENSAPLG00000012297) #33	WBP1L (ENSAPLG00000012879) #34	SFXN2 (ENSAPLG00000030360) #35	ARL3 (ENSAPLG00000016017) #36	TRIM8 (ENSAPLG00000002530) #37	SUFU (ENSAPLG00000002654)
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Japanese quail	MODERN SPECIES	24	ADD3 (ENSCJPG00005020026)	XPNPEP1 (ENSCJPG00005020024)	SORCS1 (ENSCJPG00005020021) #7	SORCS3 (ENSCJPG00005020015) #8	CFAP58 (ENSCJPG00005020013) #9	ITPRIP (ENSCJPG00005020012) #10	GSTO1 (ENSCJPG00005020011) #12	CFAP43 (ENSCJPG00005020010) #13	SFR1 (ENSCJPG00005020009) #14	SLK (ENSCJPG00005020006) #16	STN1 (ENSCJPG00005020005) #17	SH3PXD2A (ENSCJPG00005020004) #18	NEURL1 (ENSCJPG00005020003) #19	CALHM3 (ENSCJPG00005020002) #20	CALHM1 (ENSCJPG00005020001) #21	CALHM2 (ENSCJPG00005020000) #22	PDCD11 (ENSCJPG00005019999) #23	ENSCJPG00005019998	TAF5 (ENSCJPG00005019997) #25	PCGF6 (ENSCJPG00005019996) #26	INA (ENSCJPG00005019995) #27	ENSCJPG00005019994	CNNM2 (ENSCJPG00005019993) #30	AS3MT (ENSCJPG00005019992) #31	BORCS7 (ENSCJPG00005019991) #32	CYP17A1 (ENSCJPG00005019990) #33	WBP1L (ENSCJPG00005019989) #34	SFXN2 (ENSCJPG00005019988) #35	ARL3 (ENSCJPG00005019987) #36	TRIM8 (ENSCJPG00005019986) #37	SUFU (ENSCJPG00005019984)
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Turkey	MODERN SPECIES	28	XPNPEP1 (ENSMGAG00000010742)	SORCS1 (ENSMGAG00000010697) #7	SORCS3 (ENSMGAG00000010686) #8	CFAP58 (ENSMGAG00000010672) #9	ITPRIP (ENSMGAG00000015336) #10	GSTO1 (ENSMGAG00000010660) #12	CFAP43 (ENSMGAG00000010597) #13	SFR1 (ENSMGAG00000010591) #14	COL17A1 (ENSMGAG00000010621) #15	SLK (ENSMGAG00000010557) #16	STN1 (ENSMGAG00000010550) #17	SH3PXD2A (ENSMGAG00000010540) #18	NEURL1 (ENSMGAG00000010527) #19	CALHM3 (ENSMGAG00000010524) #20	CALHM1 (ENSMGAG00000010522) #21	CALHM2 (ENSMGAG00000010516) #22	PDCD11 (ENSMGAG00000010482) #23	ENSMGAG00000022024	TAF5 (ENSMGAG00000010475) #25	PCGF6 (ENSMGAG00000019850) #26	ENSMGAG00000020111 #27	ENSMGAG00000010436	CNNM2 (ENSMGAG00000016951) #30	AS3MT (ENSMGAG00000010402) #31	CYP17A1 (ENSMGAG00000010364) #33	WBP1L (ENSMGAG00000010362) #34	SFXN2 (ENSMGAG00000010330) #35	ARL3 (ENSMGAG00000010320) #36	TRIM8 (ENSMGAG00000010315) #37	SUFU (ENSMGAG00000010288)	ACTR1A (ENSMGAG00000010274)
Chicken	MODERN SPECIES	35	XPNPEP1 (ENSGALG00010020183)	SORCS1 (ENSGALG00010020170) #7	SORCS3 (ENSGALG00010019237) #8	CFAP58 (ENSGALG00010021455) #9	ITPRIP (ENSGALG00010021439) #10	GSTO2 (ENSGALG00010021390) #12	CFAP43 (ENSGALG00010021352) #13	SFR1 (ENSGALG00010021342) #14	COL17A1 (ENSGALG00010021287) #15	SLK (ENSGALG00010021240) #16	STN1 (ENSGALG00010021231) #17	SH3PXD2A (ENSGALG00010021215) #18	NEURL1 (ENSGALG00010021166) #19	CALHM3 (ENSGALG00010021132) #20	CALHM1 (ENSGALG00010021128) #21	CALHM2 (ENSGALG00010021124) #22	PDCD11 (ENSGALG00010021120) #23	USMG5 (ENSGALG00010021118)	TAF5 (ENSGALG00010021112) #25	PCGF6 (ENSGALG00010021108) #26	INA (ENSGALG00010021104) #27	NT5C2 (ENSGALG00010021095)	CNNM2 (ENSGALG00010021065) #30	AS3MT (ENSGALG00010018229) #31	BORCS7 (ENSGALG00010018199) #32	CYP17A1 (ENSGALG00010018183) #33	WBP1L (ENSGALG00010018831) #34	SFXN2 (ENSGALG00010018701) #35	ARL3 (ENSGALG00010018685) #36	ENSGALG00010018621	TRIM8 (ENSGALG00010018608) #37
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Kakapo	MODERN SPECIES	22	XPNPEP1 (ENSSHBG00005007133)	SORCS1 (ENSSHBG00005004648) #7	SORCS3 (ENSSHBG00005004232) #8	CFAP58 (ENSSHBG00005004147) #9	ITPRIP (ENSSHBG00005004137) #10	GSTO1 (ENSSHBG00005004123) #12	ENSSHBG00005004116 #13	ENSSHBG00005004081 #13	SFR1 (ENSSHBG00005004060) #14	SLK (ENSSHBG00005004050) #16	STN1 (ENSSHBG00005004031) #17	SH3PXD2A (ENSSHBG00005004014) #18	NEURL1 (ENSSHBG00005003998) #19	CALHM3 (ENSSHBG00005003981) #20	CALHM1 (ENSSHBG00005003959) #21	CALHM2 (ENSSHBG00005003944) #22	PDCD11 (ENSSHBG00005003710) #23	ENSSHBG00005003514	TAF5 (ENSSHBG00005003500) #25	PCGF6 (ENSSHBG00005003486) #26	INA (ENSSHBG00005003473) #27	ENSSHBG00005003426	CNNM2 (ENSSHBG00005003379) #30	AS3MT (ENSSHBG00005003341) #31	BORCS7 (ENSSHBG00005003312) #32	CYP17A1 (ENSSHBG00005003271) #33	WBP1L (ENSSHBG00005003246) #34	SFXN2 (ENSSHBG00005003217) #35	ARL3 (ENSSHBG00005003201) #36	TRIM8 (ENSSHBG00005003188) #37	SUFU (ENSSHBG00005003152)
Golden eagle	MODERN SPECIES	2	ENSACCG00020008431	ENSACCG00020008439 #9	ITPRIP (ENSACCG00020008449) #10	GSTO1 (ENSACCG00020008459) #12	ENSACCG00020008473 #13	ENSACCG00020008494 #13	SFR1 (ENSACCG00020008505) #14	COL17A1 (ENSACCG00020008541) #15	SLK (ENSACCG00020008584) #16	STN1 (ENSACCG00020008611) #17	SH3PXD2A (ENSACCG00020008630) #18	NEURL1 (ENSACCG00020008657) #19	CALHM3 (ENSACCG00020008676) #20	CALHM1 (ENSACCG00020008691) #21	PDCD11 (ENSACCG00020008722) #23	CALHM2 (ENSACCG00020008777) #22	TAF5 (ENSACCG00020008799) #25	PCGF6 (ENSACCG00020008830) #26	INA (ENSACCG00020008852) #27	ENSACCG00020008884	CNNM2 (ENSACCG00020008928) #30	AS3MT (ENSACCG00020008961) #31	BORCS7 (ENSACCG00020008980) #32	CYP17A1 (ENSACCG00020009021) #33	WBP1L (ENSACCG00020009066) #34	SFXN2 (ENSACCG00020009091) #35	ARL3 (ENSACCG00020009119) #36	TRIM8 (ENSACCG00020009134) #37	SUFU (ENSACCG00020009151)	ACTR1A (ENSACCG00020009175)	MFSD13A (ENSACCG00020009198)
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Medium ground finch	MODERN SPECIES	3	XPNPEP1 (ENSGFOG00000000025)	SORCS1 (ENSGFOG00000000098) #7	SORCS3 (ENSGFOG00000000897) #8	CFAP58 (ENSGFOG00000002012) #9	ITPRIP (ENSGFOG00000002026) #10	GSTO1 (ENSGFOG00000002031) #12	CFAP43 (ENSGFOG00000002038) #13	SFR1 (ENSGFOG00000002070) #14	COL17A1 (ENSGFOG00000002087) #15	SLK (ENSGFOG00000002125) #16	STN1 (ENSGFOG00000002147) #17	SH3PXD2A (ENSGFOG00000002444) #18	NEURL1 (ENSGFOG00000002459) #19	CALHM3 (ENSGFOG00000002487) #20	CALHM1 (ENSGFOG00000002507) #21	CALHM2 (ENSGFOG00000002524) #22	PDCD11 (ENSGFOG00000002545) #23	ENSGFOG00000002587	TAF5 (ENSGFOG00000002614) #25	PCGF6 (ENSGFOG00000002773) #26	ENSGFOG00000002787 #27	ENSGFOG00000002800	CNNM2 (ENSGFOG00000002873) #30	AS3MT (ENSGFOG00000003051) #31	BORCS7 (ENSGFOG00000003091) #32	CYP17A1 (ENSGFOG00000003105) #33	WBP1L (ENSGFOG00000003125) #34	SFXN2 (ENSGFOG00000003144) #35	ARL3 (ENSGFOG00000003169) #36	TRIM8 (ENSGFOG00000003192) #37	SUFU (ENSGFOG00000003217)
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Zebra finch	MODERN SPECIES	28	ENSTGUG00000019641	SORCS1 (ENSTGUG00000010498) #7	SORCS3 (ENSTGUG00000010448) #8	CFAP58 (ENSTGUG00000010439) #9	ITPRIP (ENSTGUG00000010438) #10	GSTO1 (ENSTGUG00000010435) #12	CFAP43 (ENSTGUG00000010429) #13	SFR1 (ENSTGUG00000028915) #14	COL17A1 (ENSTGUG00000010406) #15	SLK (ENSTGUG00000010378) #16	STN1 (ENSTGUG00000010354) #17	SH3PXD2A (ENSTGUG00000010339) #18	NEURL1 (ENSTGUG00000010332) #19	CALHM3 (ENSTGUG00000010326) #20	CALHM1 (ENSTGUG00000010322) #21	CALHM2 (ENSTGUG00000010317) #22	ENSTGUG00000020703	TAF5 (ENSTGUG00000010278) #25	PDCD11 (ENSTGUG00000010303) #23	INA (ENSTGUG00000010268) #27	PCGF6 (ENSTGUG00000021064) #26	ENSTGUG00000010251	CNNM2 (ENSTGUG00000010244) #30	AS3MT (ENSTGUG00000010233) #31	BORCS7 (ENSTGUG00000010228) #32	CYP17A1 (ENSTGUG00000010219) #33	WBP1L (ENSTGUG00000019651) #34	SFXN2 (ENSTGUG00000010190) #35	ARL3 (ENSTGUG00000019757) #36	TRIM8 (ENSTGUG00000010157) #37	ENSTGUG00000024526
Common canary	MODERN SPECIES	7	XPNPEP1 (ENSSCAG00000015812)	SORCS1 (ENSSCAG00000015963) #7	SORCS3 (ENSSCAG00000016194) #8	ENSSCAG00000016213	ITPRIP (ENSSCAG00000016214) #10	GSTO1 (ENSSCAG00000016216) #12	ENSSCAG00000016218 #13	SFR1 (ENSSCAG00000016224) #14	ENSSCAG00000016228	SLK (ENSSCAG00000016280) #16	STN1 (ENSSCAG00000016371) #17	SH3PXD2A (ENSSCAG00000016378) #18	NEURL1 (ENSSCAG00000016390) #19	CALHM3 (ENSSCAG00000016394) #20	CALHM1 (ENSSCAG00000016401) #21	CALHM2 (ENSSCAG00000016403) #22	PDCD11 (ENSSCAG00000016425) #23	ENSSCAG00000016437	TAF5 (ENSSCAG00000016438) #25	PCGF6 (ENSSCAG00000016440) #26	ENSSCAG00000016444	CNNM2 (ENSSCAG00000016453) #30	AS3MT (ENSSCAG00000016464) #31	BORCS7 (ENSSCAG00000016467) #32	CYP17A1 (ENSSCAG00000016469) #33	WBP1L (ENSSCAG00000016475) #34	SFXN2 (ENSSCAG00000016485) #35	ARL3 (ENSSCAG00000016489) #36	TRIM8 (ENSSCAG00000016492) #37	SUFU (ENSSCAG00000016503)	ACTR1A (ENSSCAG00000016521)
Flycatcher	MODERN SPECIES	25	ENSFALG00000028861 #7	ENSFALG00000024289	ENSFALG00000027115 #8	CFAP58 (ENSFALG00000008836) #9	ITPRIP (ENSFALG00000015177) #10	GSTO1 (ENSFALG00000023298) #12	CFAP43 (ENSFALG00000008825) #13	SFR1 (ENSFALG00000008822) #14	COL17A1 (ENSFALG00000008808) #15	SLK (ENSFALG00000008795) #16	STN1 (ENSFALG00000008791) #17	SH3PXD2A (ENSFALG00000008788) #18	NEURL1 (ENSFALG00000008785) #19	CALHM3 (ENSFALG00000008782) #20	CALHM1 (ENSFALG00000008781) #21	CALHM2 (ENSFALG00000008779) #22	PDCD11 (ENSFALG00000008775) #23	ENSFALG00000008772	TAF5 (ENSFALG00000008762) #25	PCGF6 (ENSFALG00000008758) #26	ENSFALG00000008745	CNNM2 (ENSFALG00000027005) #30	AS3MT (ENSFALG00000008732) #31	BORCS7 (ENSFALG00000027772) #32	CYP17A1 (ENSFALG00000008728) #33	WBP1L (ENSFALG00000023398) #34	SFXN2 (ENSFALG00000008726) #35	ARL3 (ENSFALG00000023787) #36	TRIM8 (ENSFALG00000008714) #37	SUFU (ENSFALG00000008706)	ACTR1A (ENSFALG00000008698)
Great tit	MODERN SPECIES	26	XPNPEP1 (ENSPMJG00000005139)	ENSPMJG00000005133 #7	SORCS3 (ENSPMJG00000004998) #8	CFAP58 (ENSPMJG00000004959) #9	ITPRIP (ENSPMJG00000004954) #10	GSTO1 (ENSPMJG00000004953) #12	CFAP43 (ENSPMJG00000004936) #13	SFR1 (ENSPMJG00000004933) #14	COL17A1 (ENSPMJG00000004922) #15	SLK (ENSPMJG00000004918) #16	STN1 (ENSPMJG00000004908) #17	SH3PXD2A (ENSPMJG00000004903) #18	NEURL1 (ENSPMJG00000004900) #19	CALHM3 (ENSPMJG00000004896) #20	CALHM1 (ENSPMJG00000004895) #21	CALHM2 (ENSPMJG00000004894) #22	PDCD11 (ENSPMJG00000004885) #23	ENSPMJG00000004884	TAF5 (ENSPMJG00000004873) #25	PCGF6 (ENSPMJG00000004871) #26	ENSPMJG00000004870 #27	ENSPMJG00000004864	CNNM2 (ENSPMJG00000004847) #30	AS3MT (ENSPMJG00000004824) #31	BORCS7 (ENSPMJG00000004813) #32	CYP17A1 (ENSPMJG00000004801) #33	WBP1L (ENSPMJG00000004795) #34	SFXN2 (ENSPMJG00000004788) #35	ARL3 (ENSPMJG00000004786) #36	TRIM8 (ENSPMJG00000004768) #37	SUFU (ENSPMJG00000004763)
African ostrich	MODERN SPECIES	290												SH3PXD2A (ENSSCUG00000002067) #18	NEURL1 (ENSSCUG00000002062) #19	CALHM3 (ENSSCUG00000002056) #20	CALHM1 (ENSSCUG00000002050) #21	CALHM2 (ENSSCUG00000002045) #22	PDCD11 (ENSSCUG00000002038) #23	ENSSCUG00000002034	TAF5 (ENSSCUG00000002033) #25	PCGF6 (ENSSCUG00000002030) #26	ENSSCUG00000002023	CNNM2 (ENSSCUG00000002018) #30	AS3MT (ENSSCUG00000002015) #31	CYP17A1 (ENSSCUG00000001998) #33	WBP1L (ENSSCUG00000001977) #34	ARL3 (ENSSCUG00000001973) #36	TRIM8 (ENSSCUG00000001970) #37	SUFU (ENSSCUG00000001964)	ACTR1A (ENSSCUG00000001959)	MFSD13A (ENSSCUG00000001958)	SLF2 (ENSSCUG00000001954)
Australian saltwater crocodile	MODERN SPECIES	68	SORCS1 (ENSCPRG00005011482) #7	ENSCPRG00005011540	SORCS3 (ENSCPRG00005011631) #8	CFAP58 (ENSCPRG00005012375) #9	ITPRIP (ENSCPRG00005012384) #10	GSTO1 (ENSCPRG00005012391) #12	CFAP43 (ENSCPRG00005012405) #13	SFR1 (ENSCPRG00005012481) #14	ENSCPRG00005012489	SLK (ENSCPRG00005012498) #16	STN1 (ENSCPRG00005012508) #17	SH3PXD2A (ENSCPRG00005012523) #18	NEURL1 (ENSCPRG00005012544) #19	CALHM3 (ENSCPRG00005012558) #20	CALHM1 (ENSCPRG00005012562) #21	CALHM2 (ENSCPRG00005012571) #22	PDCD11 (ENSCPRG00005012589) #23	ENSCPRG00005012672	TAF5 (ENSCPRG00005012674) #25	PCGF6 (ENSCPRG00005012695) #26	ENSCPRG00005012714	CNNM2 (ENSCPRG00005012858) #30	ENSCPRG00005012869	AS3MT (ENSCPRG00005012880) #31	ENSCPRG00005012904	CYP17A1 (ENSCPRG00005012913) #33	WBP1L (ENSCPRG00005012923) #34	SFXN2 (ENSCPRG00005012928) #35	ARL3 (ENSCPRG00005012930) #36	TRIM8 (ENSCPRG00005012943) #37	SUFU (ENSCPRG00005012955)
Anura	ANCESTRAL SPECIES	25	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT00570000079216	ENSGT01030000234549.a.b	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT00390000018550 #14	ENSGT00940000163514.C	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000155737.a.b ##36	ENSGT00940000157919 #37
Leishan spiny toad	MODERN SPECIES	9	ATRNL1 (ENSLLEG00000024130)	ENSLLEG00000024434	ENSLLEG00000024454	GFRA1 (ENSLLEG00000024500)	ENSLLEG00000024775	ENSLLEG00000024963	ENSLLEG00000025335	ENSLLEG00000025427	SLK (ENSLLEG00000025533) #16	STN1 (ENSLLEG00000026144) #17	SH3PXD2A (ENSLLEG00000026291) #18	NEURL1 (ENSLLEG00000026595) #19	ENSLLEG00000026720 #20	CALHM3 (ENSLLEG00000026757) #20	CALHM1 (ENSLLEG00000026794) #21	CALHM2 (ENSLLEG00000026828) #22	ENSLLEG00000026851	PDCD11 (ENSLLEG00000026943) #23	ENSLLEG00000027203	TAF5 (ENSLLEG00000027307) #25	PCGF6 (ENSLLEG00000027942) #26	INA (ENSLLEG00000028090) #27	ENSLLEG00000028130	CNNM2 (ENSLLEG00000028384) #30	ENSLLEG00000028460 #31	ENSLLEG00000028609	ENSLLEG00000028642 #31	BORCS7 (ENSLLEG00000028736) #32	CYP17A1 (ENSLLEG00000028763) #33	WBP1L (ENSLLEG00000028803) #34	SFXN2 (ENSLLEG00000029000) #35
Frog	MODERN SPECIES	7	XB5799637 (ENSXETG00000026599)	cfap46 (ENSXETG00000014784)	ENSXETG00000042597	ENSXETG00000014777	gsto1 (ENSXETG00000026601)	gsto2 (ENSXETG00000026602) #12	sfr1 (ENSXETG00000011407) #14	col17a1 (ENSXETG00000033563)	slk (ENSXETG00000030054) #16	stn1 (ENSXETG00000011402) #17	ENSXETG00000047506	sh3pxd2a (ENSXETG00000011399) #18	neurl1 (ENSXETG00000011397) #19	calhm3 (ENSXETG00000033589) #20	calhm1 (ENSXETG00000031601) #21	calhm2 (ENSXETG00000011395) #22	pdcd11 (ENSXETG00000009482) #23	atp5mk (ENSXETG00000034854)	taf5 (ENSXETG00000011394) #25	pcgf6 (ENSXETG00000038066) #26	ina (ENSXETG00000009478) #27	nt5c2 (ENSXETG00000009475)	cnnm2 (ENSXETG00000009464) #30	as3mt.2 (ENSXETG00000031996) #31	borcs7 (ENSXETG00000037489) #32	cyp17a1 (ENSXETG00000015229) #33	wbp1l (ENSXETG00000031465) #34	sfxn2 (ENSXETG00000015227) #35	arl3 (ENSXETG00000015225) #36	ENSXETG00000048305	trim8 (ENSXETG00000032863) #37
Actinopterygii	ANCESTRAL SPECIES	29	ENSGT01030000234563.b.a.b.a.a ##7	ENSGT01030000234563.b.a.b.b #7	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184 #16	ENSGT00940000168158	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00390000005029	ENSGT00940000159518
Neopterygii	ANCESTRAL SPECIES	33	ENSGT00760000119781	ENSGT01030000234563.b.a.b.a.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184 #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00390000005029
Osteoglossocephalai	ANCESTRAL SPECIES	92						ENSGT00940000157732.f.b #18	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515
Clupeocephala	ANCESTRAL SPECIES	209						ENSGT00940000157732.f.b #18	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a
Euteleosteomorpha	ANCESTRAL SPECIES	89	ENSGT01030000234606.a.a.a.b	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01000000215701	ENSGT00940000154865	ENSGT00940000167270	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A
Acanthomorphata	ANCESTRAL SPECIES	96	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT00940000154865	ENSGT00940000167270	ENSGT00530000068411	ENSGT00860000134673	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b
Euacanthomorphacea	ANCESTRAL SPECIES	51	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT00940000154865	ENSGT00940000167270	ENSGT00530000068411	ENSGT00860000134673	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b
Percomorphaceae	ANCESTRAL SPECIES	57													ENSGT00860000134673	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b	ENSGT00940000161152	ENSGT01030000234606.a.a.a.b	ENSGT00700000104522	ENSGT00940000157593
Percomorphaceae_B	ANCESTRAL SPECIES	24	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00990000204611	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00990000204611	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583
Aplocheiloidei	ANCESTRAL SPECIES	75	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b.i	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b	ENSGT00940000161152	ENSGT00940000170261	ENSGT00700000104522
Mangrove rivulus	MODERN SPECIES	60	RNF166 (ENSKMAG00000017768)	cyp17a1 (ENSKMAG00000017730) #33	borcs7 (ENSKMAG00000017712) #32	nt5c2a (ENSKMAG00000017632)	wbp1la (ENSKMAG00000017540) #34	fbxw4 (ENSKMAG00000017521)	fgf8a (ENSKMAG00000017503)	slc2a15a (ENSKMAG00000017465)	ENSKMAG00000017448	tlx1 (ENSKMAG00000017438)	ENSKMAG00000017422	ENSKMAG00000017386	rab1ab (ENSKMAG00000017357)	hells (ENSKMAG00000017279)	CALHM3 (ENSKMAG00000017261) #20	calhm2.1 (ENSKMAG00000017248) #22	ncapd3 (ENSKMAG00000017218)	ENSKMAG00000017194	ENSKMAG00000017167	ENSKMAG00000017115	ENSKMAG00000016977	macroh2a2 (ENSKMAG00000016927)	GBF1 (ENSKMAG00000016781)	pitx3 (ENSKMAG00000016734)	PNLIPRP2 (ENSKMAG00000016665)	hspa12a (ENSKMAG00000016576)	eno4 (ENSKMAG00000016525)	shtn1 (ENSKMAG00000016499)	atp6v1ba (ENSKMAG00000016461)	vax1 (ENSKMAG00000016441)	ENSKMAG00000016428
Ovalentaria_B	ANCESTRAL SPECIES	25	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411
Pomacentridae	ANCESTRAL SPECIES	36					ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00940000154681.a.f	ENSGT00940000154511.a	ENSGT00950000182909.b.b.b	ENSGT00390000008797	ENSGT00940000153335.a.b	ENSGT01030000234642.a.b.b.d.a.e	ENSGT00510000047589	ENSGT00390000014293.b	ENSGT00390000007683
Pomacentridae_A	ANCESTRAL SPECIES	196					ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411
Amphiprion	ANCESTRAL SPECIES	45	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000164115.A.f.b.a.a.b.a	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000182466	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143
Clown anemonefish	MODERN SPECIES	3596								ENSAOCG00000006462	tlx1 (ENSAOCG00000000305)	ENSAOCG00000000303	cep68 (ENSAOCG00000006423)	rab1ab (ENSAOCG00000006385)	hells (ENSAOCG00000006348)	CALHM3 (ENSAOCG00000006273) #20	ENSAOCG00000006231	calhm2.1 (ENSAOCG00000006221) #22	ENSAOCG00000006209	ncapd3 (ENSAOCG00000006183)	ENSAOCG00000006151	ENSAOCG00000006131
Orange clownfish	MODERN SPECIES	12	slc2a15a (ENSAPEG00000001082)	ENSAPEG00000001191	ENSAPEG00000001218	ENSAPEG00000001269	ENSAPEG00000001282	ENSAPEG00000001289	tlx1 (ENSAPEG00000001309)	ENSAPEG00000001331	cep68 (ENSAPEG00000001346)	rab1ab (ENSAPEG00000001358)	hells (ENSAPEG00000001422)	CALHM3 (ENSAPEG00000001492) #20	ENSAPEG00000001536	ENSAPEG00000001551	ENSAPEG00000001567	calhm2.1 (ENSAPEG00000001579) #22	ENSAPEG00000001586	ENSAPEG00000001663	nt5c2a (ENSAPEG00000001693)	borcs7 (ENSAPEG00000001760) #32	cyp17a1 (ENSAPEG00000001772) #33	ENSAPEG00000001814	RNF166 (ENSAPEG00000001824)	ctu2 (ENSAPEG00000001847)	ENSAPEG00000001869	cdk1 (ENSAPEG00000001888)	HNRNPLL (ENSAPEG00000001934)	ENSAPEG00000001990	galm (ENSAPEG00000002008)	ENSAPEG00000002041	ENSAPEG00000002155
Spiny chromis	MODERN SPECIES	581													ATE1 (ENSAPOG00000004552)	fgfr2 (ENSAPOG00000004708)	wdr11 (ENSAPOG00000004844)	calhm2.1 (ENSAPOG00000004861) #22	ncapd3 (ENSAPOG00000005025)	ENSAPOG00000005090
Bicolor damselfish	MODERN SPECIES	898							cdh11 (ENSSPAG00000010886)	ENSSPAG00000011408	chrna1 (ENSSPAG00000011422)	ENSSPAG00000011458	ENSSPAG00000011535	ENSSPAG00000011546	mtx2 (ENSSPAG00000011552)	ENSSPAG00000011608	CALHM3 (ENSSPAG00000011653) #20	calhm2.1 (ENSSPAG00000011678) #22	ncapd3 (ENSSPAG00000011704)
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583
Carangaria	ANCESTRAL SPECIES	19						ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27
Carangaria_A	ANCESTRAL SPECIES	31	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27	ENSGT00940000158034 #26	ENSGT00940000166025.b
Seriola	ANCESTRAL SPECIES	14	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27	ENSGT00940000158034 #26
Greater amberjack	MODERN SPECIES	30						fbxw4 (ENSSDUG00000016703)	fgf8a (ENSSDUG00000016733)	slc2a15a (ENSSDUG00000016737)	ENSSDUG00000016763	tlx1 (ENSSDUG00000016770)	ENSSDUG00000016787	ENSSDUG00000016800	rab1ab (ENSSDUG00000016888)	hells (ENSSDUG00000016924)	CALHM3 (ENSSDUG00000017015) #20	calhm2.1 (ENSSDUG00000017039) #22	ncapd3 (ENSSDUG00000017066)	zgc:175280 (ENSSDUG00000017134)	ENSSDUG00000017182	vrk2 (ENSSDUG00000017194)	fancl (ENSSDUG00000017224)	ENSSDUG00000017276	ENSSDUG00000017290	RIMS1 (ENSSDUG00000017330)	asrgl1 (ENSSDUG00000017515)	OGFRL1 (ENSSDUG00000017527)	b3gat2 (ENSSDUG00000017562)	smap1 (ENSSDUG00000017573)	slc1a4 (ENSSDUG00000017597)	sertad2b (ENSSDUG00000017629)	INA (ENSSDUG00000017633) #27
Yellowtail amberjack	MODERN SPECIES	3109	ENSSLDG00000018704	cyp17a1 (ENSSLDG00000018716) #33	borcs7 (ENSSLDG00000018734) #32	nt5c2a (ENSSLDG00000018749)	wbp1la (ENSSLDG00000018784) #34	fbxw4 (ENSSLDG00000018817)	fgf8a (ENSSLDG00000018838)	slc2a15a (ENSSLDG00000018856)	ENSSLDG00000018888	tlx1 (ENSSLDG00000018898)	ENSSLDG00000018910	ENSSLDG00000018925	rab1ab (ENSSLDG00000018942)	hells (ENSSLDG00000018960)	CALHM3 (ENSSLDG00000019000) #20	calhm2.1 (ENSSLDG00000019017) #22	ENSSLDG00000019024	ncapd3 (ENSSLDG00000019038)	zgc:175280 (ENSSLDG00000019070)	ENSSLDG00000019095	ENSSLDG00000019106	fancl (ENSSLDG00000019147)	ENSSLDG00000019191	RIMS1 (ENSSLDG00000019205)	asrgl1 (ENSSLDG00000019318)	OGFRL1 (ENSSLDG00000019346)	mibp2 (ENSSLDG00000019383)	b3gat2 (ENSSLDG00000019390)	smap1 (ENSSLDG00000019406)	slc1a4 (ENSSLDG00000019426)	sertad2b (ENSSLDG00000019457)
Barramundi perch	MODERN SPECIES	338	ENSLCAG00010013228	cyp17a1 (ENSLCAG00010013188) #33	borcs7 (ENSLCAG00010013169) #32	nt5c2a (ENSLCAG00010013040)	wbp1la (ENSLCAG00010012975) #34	fbxw4 (ENSLCAG00010012970)	fgf8a (ENSLCAG00010012964)	slc2a15a (ENSLCAG00010012928)	ENSLCAG00010012914	tlx1 (ENSLCAG00010012909)	ENSLCAG00010012907	cep68 (ENSLCAG00010012901)	rab1ab (ENSLCAG00010012896)	hells (ENSLCAG00010012788)	CALHM3 (ENSLCAG00010012762) #20	calhm2.1 (ENSLCAG00010012756) #22	ncapd3 (ENSLCAG00010012677)
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27	ENSGT00940000158034 #26
Climbing perch	MODERN SPECIES	6	cyp17a1 (ENSATEG00000006671) #33	ENSATEG00000027968 #32	nt5c2a (ENSATEG00000007708)	wbp1la (ENSATEG00000028457) #34	ENSATEG00000007857	fbxw4 (ENSATEG00000007875)	fgf8a (ENSATEG00000026743)	slc2a15a (ENSATEG00000007930)	ENSATEG00000007988	tlx1 (ENSATEG00000008007)	ENSATEG00000028010	ENSATEG00000008036	ENSATEG00000008052	ENSATEG00000008107	ENSATEG00000008203 #20	ENSATEG00000008251 #22	ENSATEG00000008267	CCDC85A (ENSATEG00000008323)	ENSATEG00000008364	FANCL (ENSATEG00000008380)	ENSATEG00000025669	ENSATEG00000027192	ENSATEG00000008394	RIMS1 (ENSATEG00000008497)	asrgl1 (ENSATEG00000008570)	OGFRL1 (ENSATEG00000008583)	b3gat2 (ENSATEG00000008614)	smap1 (ENSATEG00000027185)	ENSATEG00000008668	ENSATEG00000008702	ENSATEG00000008716 #27
Siamese fighting fish	MODERN SPECIES	6	nt5c2a (ENSBSLG00000018270)	ENSBSLG00000018157 #34	fgf8a (ENSBSLG00000017970)	fbxw4 (ENSBSLG00000017928)	slc2a15a (ENSBSLG00000017772)	ENSBSLG00000017749	ENSBSLG00000017735	ENSBSLG00000017719	tlx1 (ENSBSLG00000017662)	ENSBSLG00000017648	ENSBSLG00000017633	ENSBSLG00000017629	rab1ab (ENSBSLG00000017531)	hells (ENSBSLG00000017428)	CALHM3 (ENSBSLG00000017409) #20	calhm2.1 (ENSBSLG00000017403) #22	ncapd3 (ENSBSLG00000017235)	ENSBSLG00000017204	ENSBSLG00000017159	ENSBSLG00000016734	ENSBSLG00000016317	pcca (ENSBSLG00000015707)	FAM98A (ENSBSLG00000015581)	ENSBSLG00000015566	ENSBSLG00000015336	ENSBSLG00000015307	CDT1 (ENSBSLG00000015259)	aprt (ENSBSLG00000015169)	tk2 (ENSBSLG00000015014)	ENSBSLG00000015002	nvl (ENSBSLG00000014220)
Zig-zag eel	MODERN SPECIES	6	ENSMAMG00000026497	slc2a15a (ENSMAMG00000009076)	fgf8a (ENSMAMG00000009113)	fbxw4 (ENSMAMG00000009140)	nt5c2a (ENSMAMG00000009164)	ENSMAMG00000009222 #32	cyp17a1 (ENSMAMG00000009230) #33	ENSMAMG00000009255	ENSMAMG00000009262	ENSMAMG00000009280	ENSMAMG00000009304	ENSMAMG00000009341	ENSMAMG00000009356	ENSMAMG00000009850	ENSMAMG00000009903 #20	ENSMAMG00000027999 #22	ENSMAMG00000009946	ENSMAMG00000009982	ENSMAMG00000010014	ENSMAMG00000010029	ENSMAMG00000010035	CCDC85A (ENSMAMG00000010040)	ENSMAMG00000010062	fancl (ENSMAMG00000024657)	ENSMAMG00000010110	ENSMAMG00000010123	ENSMAMG00000010141	RIMS1 (ENSMAMG00000010155)	ENSMAMG00000010214	asrgl1 (ENSMAMG00000010317)	asrgl1 (ENSMAMG00000025178)
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583
Eupecaria_A	ANCESTRAL SPECIES	26	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583
Ballan wrasse	MODERN SPECIES	290														DLK2 (ENSLBEG00000024196)	LRRC73 (ENSLBEG00000024245)	calhm2.1 (ENSLBEG00000024277) #22	ncapd3 (ENSLBEG00000024293)	CALHM3 (ENSLBEG00000024328) #20	ENSLBEG00000024344	ENSLBEG00000024364	exo1 (ENSLBEG00000024405)	yipf4 (ENSLBEG00000024453)	BIRC6 (ENSLBEG00000024531)	ENSLBEG00000024757	ttc27 (ENSLBEG00000024787)	LTBP1 (ENSLBEG00000024891)	rasgrp3 (ENSLBEG00000025000)	ENSLBEG00000025100	DNAH2 (ENSLBEG00000025185)	FAM98A (ENSLBEG00000025346)
Eupecaria_B	ANCESTRAL SPECIES	26	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583
Eupecaria_C	ANCESTRAL SPECIES	28	ENSGT00570000079168.b.b.a	ENSGT00950000183100.B	ENSGT00390000002970	ENSGT00390000013448.a.a	ENSGT00570000079239	ENSGT00530000063956.b.b	ENSGT00940000158005	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00940000157563	ENSGT00940000156083	ENSGT00940000154200.A.b	ENSGT00940000164286.j.b.b	ENSGT00390000010672	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	32	ENSGT00570000079168.b.b.a	ENSGT00950000183100.B	ENSGT00390000002970	ENSGT00390000013448.a.a	ENSGT00570000079239	ENSGT00530000063956.b.b	ENSGT00940000158005	ENSGT00390000017259	ENSGT00390000012337	ENSGT00940000157348	ENSGT00940000157563	ENSGT00940000156083	ENSGT00940000154200.A.b	ENSGT00940000164286.j.b.b	ENSGT00390000010672	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c
Large yellow croaker	MODERN SPECIES	2	ENSLCRG00005000114	tlx1 (ENSLCRG00005000123)	ENSLCRG00005000125	cep68 (ENSLCRG00005000130)	rab1ab (ENSLCRG00005000142)	hells (ENSLCRG00005000195)	CALHM3 (ENSLCRG00005000302) #20	ENSLCRG00005000309	ENSLCRG00005000317	ENSLCRG00005000321	ENSLCRG00005000326	pcca (ENSLCRG00005000375)	ENSLCRG00005000529	vps8 (ENSLCRG00005000538)	ENSLCRG00005005179	calhm2.1 (ENSLCRG00005005181) #22	ncapd3 (ENSLCRG00005005192)	ENSLCRG00005005472	RIN2 (ENSLCRG00005005475)	ENSLCRG00005005481	ENSLCRG00005005497	ENSLCRG00005005499	CCDC85A (ENSLCRG00005005501)	vrk2 (ENSLCRG00005005503)	fancl (ENSLCRG00005005508)	ENSLCRG00005005580	ENSLCRG00005005582	RIMS1 (ENSLCRG00005005586)	ENSLCRG00005005596	asrgl1 (ENSLCRG00005005652)	OGFRL1 (ENSLCRG00005005654)
European seabass	MODERN SPECIES	1	ENSDLAG00005034765	PIEZO1 (ENSDLAG00005023931)	ENSDLAG00005023080	ENSDLAG00005022841	ENSDLAG00005022823	ENSDLAG00005028528	ENSDLAG00005032603	ENSDLAG00005021311	ENSDLAG00005033075	ENSDLAG00005027523	bmpr1aa (ENSDLAG00005020951)	ENSDLAG00005030167	ENSDLAG00005020810	ENSDLAG00005035052	ENSDLAG00005020797	ENSDLAG00005020792 #22	ENSDLAG00005020760	ENSDLAG00005020749	ANKRD1 (ENSDLAG00005020739)	pcgf5a (ENSDLAG00005032934)	HECTD2 (ENSDLAG00005020694)	ppp1r3ca (ENSDLAG00005020687)	FGFBP3 (ENSDLAG00005020683)	ENSDLAG00005020681	ENSDLAG00005020667	ENSDLAG00005020661	ENSDLAG00005020657	ENSDLAG00005020601	ENSDLAG00005020593	ENSDLAG00005020485	EGR2 (ENSDLAG00005031687)
Gilthead seabream	MODERN SPECIES	6	desi2 (ENSSAUG00010016325)	MTRF1L (ENSSAUG00010016324)	fbxo5 (ENSSAUG00010016323)	vip (ENSSAUG00010016320)	ANAPC1 (ENSSAUG00010014461)	ENSSAUG00010014416	SLC16A12 (ENSSAUG00010014414)	pank1a (ENSSAUG00010014393)	zgc:65997 (ENSSAUG00010014391)	nphp1 (ENSSAUG00010014386)	MAL (ENSSAUG00010014381)	malb (ENSSAUG00010014376)	pcca (ENSSAUG00010014231)	ENSSAUG00010014221	vps8 (ENSSAUG00010013756)	calhm2.1 (ENSSAUG00010013739) #22	ncapd3 (ENSSAUG00010013471)	ENSSAUG00010014115	RIN2 (ENSSAUG00010014110)	ENSSAUG00010013859	ENSSAUG00010013857	CCDC85A (ENSSAUG00010013855)	vrk2 (ENSSAUG00010013851)	fancl (ENSSAUG00010013845)	ENSSAUG00010013844	ENSSAUG00010013841	RIMS1 (ENSSAUG00010011687)	asrgl1 (ENSSAUG00010011665)	OGFRL1 (ENSSAUG00010011664)	b3gat2 (ENSSAUG00010011663)	ENSSAUG00010011661
Perciformes	ANCESTRAL SPECIES	40	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.n	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b
Cottioidei	ANCESTRAL SPECIES	36					ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.n	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000159378	ENSGT00940000159406	ENSGT00390000000403	ENSGT00940000153441.a.b	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT01050000244968.d	ENSGT00940000158499	ENSGT00390000001491.b
Lumpfish	MODERN SPECIES	6	ENSCLMG00005005051	ENSCLMG00005005055	ENSCLMG00005005062	wbp1la (ENSCLMG00005005063) #34	fbxw4 (ENSCLMG00005005066)	fgf8a (ENSCLMG00005005067)	slc2a15a (ENSCLMG00005005070)	ENSCLMG00005005071	ENSCLMG00005005075	tlx1 (ENSCLMG00005005077)	cep68 (ENSCLMG00005005087)	rab1ab (ENSCLMG00005005090)	ENSCLMG00005005100	hells (ENSCLMG00005005103)	CALHM3 (ENSCLMG00005005124) #20	calhm2.1 (ENSCLMG00005005127) #22	ncapd3 (ENSCLMG00005005143)	dnajc12 (ENSCLMG00005005429)	ENSCLMG00005005435	CACUL1 (ENSCLMG00005005444)	MYPN (ENSCLMG00005005447)	atoh7 (ENSCLMG00005005449)	PKD2L1 (ENSCLMG00005005450)	tial1 (ENSCLMG00005005456)	bag3 (ENSCLMG00005005512)	inpp5f (ENSCLMG00005005516)	mcmbp (ENSCLMG00005005943)	sec23ip (ENSCLMG00005005956)	csgalnact2 (ENSCLMG00005006181)	ret (ENSCLMG00005006182)	si:dkey-192p21.6 (ENSCLMG00005006250)
Stickleback	MODERN SPECIES	6	ablim1a (ENSGACG00000003725)	fhip2a (ENSGACG00000003758)	srfb (ENSGACG00000003778)	wbp1la (ENSGACG00000003782) #34	fbxw4 (ENSGACG00000003785)	fgf8a (ENSGACG00000003803)	slc2a15a (ENSGACG00000003828)	ENSGACG00000003848	ENSGACG00000003856	tlx1 (ENSGACG00000003860)	ENSGACG00000003861	ENSGACG00000003862	rab1ab (ENSGACG00000003864)	hells (ENSGACG00000003897)	CALHM3 (ENSGACG00000003915) #20	calhm2.1 (ENSGACG00000003917) #22	ncapd3 (ENSGACG00000003922)	mxtx1 (ENSGACG00000003944)	ENSGACG00000003951	sertad2b (ENSGACG00000003958)	slc1a4 (ENSGACG00000003961)	smap1 (ENSGACG00000003966)	b3gat2 (ENSGACG00000003974)	OGFRL1 (ENSGACG00000003979)	asrgl1 (ENSGACG00000003982)	RIMS1 (ENSGACG00000004016)	PTK7 (ENSGACG00000004033)	ENSGACG00000004041	si:ch211-114n24.6 (ENSGACG00000004049)	ENSGACG00000004053	ENSGACG00000004080
Perciformes_a	ANCESTRAL SPECIES	35	ENSGT00940000154511.a	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.n	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b
Pike perch	MODERN SPECIES	193	borcs7 (ENSSLUG00000023402) #32	nt5c2a (ENSSLUG00000023014)	ENSSLUG00000022977	wbp1la (ENSSLUG00000022974) #34	fbxw4 (ENSSLUG00000022969)	fgf8a (ENSSLUG00000022963)	slc2a15a (ENSSLUG00000022955)	ENSSLUG00000022951	ENSSLUG00000022945	tlx1 (ENSSLUG00000022940)	ENSSLUG00000022937	ENSSLUG00000022929	rab1ab (ENSSLUG00000022817)	hells (ENSSLUG00000022754)	CALHM3 (ENSSLUG00000022731) #20	calhm2.1 (ENSSLUG00000022728) #22	ncapd3 (ENSSLUG00000022558)
Tiger tail seahorse	MODERN SPECIES	42												ENSHCOG00000001043	ncapd3 (ENSHCOG00000001088)	hells (ENSHCOG00000001119)	CALHM3 (ENSHCOG00000001129) #20	calhm2.1 (ENSHCOG00000001131) #22	rab1ab (ENSHCOG00000001137)	ENSHCOG00000001144	ENSHCOG00000001147	tlx1 (ENSHCOG00000001150)
Pinecone sodierfish	MODERN SPECIES	6	vax1 (ENSMMDG00005024482)	atp6v1ba (ENSMMDG00005024487)	shtn1 (ENSMMDG00005024504)	eno4 (ENSMMDG00005024508)	hspa12a (ENSMMDG00005024516)	PNLIPRP2 (ENSMMDG00005024531)	pitx3 (ENSMMDG00005024535)	GBF1 (ENSMMDG00005024541)	macroh2a2 (ENSMMDG00005024548)	ENSMMDG00005024550	ENSMMDG00005024551	ENSMMDG00005024552	ENSMMDG00005024553	hells (ENSMMDG00005024554)	CALHM3 (ENSMMDG00005024557) #20	calhm2.1 (ENSMMDG00005024558) #22	ENSMMDG00005024559	pcgf6 (ENSMMDG00005024561) #26	inaa (ENSMMDG00005024563) #27	ENSMMDG00005024565	ENSMMDG00005024566	ENSMMDG00005024569	pcgf5a (ENSMMDG00005024571)	cep68 (ENSMMDG00005024573)	ENSMMDG00005024574	tlx1 (ENSMMDG00005024575)	ENSMMDG00005024576	slc2a15a (ENSMMDG00005024578)	fgf8a (ENSMMDG00005024579)	fbxw4 (ENSMMDG00005024581)	wbp1la (ENSMMDG00005024583) #34
Cod	MODERN SPECIES	6	kcnk18 (ENSGMOG00000029708)	vax1 (ENSGMOG00000033199)	atp6v1ba (ENSGMOG00000000178)	shtn1 (ENSGMOG00000024092)	eno4 (ENSGMOG00000015450)	hspa12a (ENSGMOG00000005300)	PNLIPRP2 (ENSGMOG00000007955)	pitx3 (ENSGMOG00000037230)	ENSGMOG00000007931	macroh2a2 (ENSGMOG00000007928)	ENSGMOG00000025595	ENSGMOG00000033488	ENSGMOG00000031326	hells (ENSGMOG00000017884)	ENSGMOG00000017916 #20	ENSGMOG00000017930 #22	ENSGMOG00000036392	ENSGMOG00000026927	ENSGMOG00000012670 #26	ENSGMOG00000012677 #27	ENSGMOG00000016016	ENSGMOG00000016203 #13	ENSGMOG00000016222 #13	sfr1 (ENSGMOG00000016280) #14	ENSGMOG00000016289	slka (ENSGMOG00000016391) #16	SH3PXD2A (ENSGMOG00000026660) #18	ENSGMOG00000016447 ##19	ENSGMOG00000016469 ##7	ENSGMOG00000016509 ##7	ENSGMOG00000016547
Protacanthopterygii	ANCESTRAL SPECIES	88	ENSGT01030000234606.a.a.a.b	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01000000215701	ENSGT00940000154865	ENSGT00940000167270	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155571.A
Salmoninae	ANCESTRAL SPECIES	243	ENSGT00940000165200.e	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000158302.d.a.j.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000154865.vb.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00950000183054.b.d.j
Salmo	ANCESTRAL SPECIES	29	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000154865.vb.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00950000183054.b.d.j
River trout	MODERN SPECIES	35	PDZD8 (ENSSTUG00000002940)	slc18a2 (ENSSTUG00000002972)	ENSSTUG00000003210	ENSSTUG00000003218	vax1 (ENSSTUG00000003279)	atp6v1ba (ENSSTUG00000003351)	shtn1 (ENSSTUG00000004139)	hspa12a (ENSSTUG00000004185)	pitx3 (ENSSTUG00000004502)	GBF1 (ENSSTUG00000004539)	macroh2a2 (ENSSTUG00000004938)	ENSSTUG00000004984	ENSSTUG00000005002	hells (ENSSTUG00000005197)	CALHM3 (ENSSTUG00000006872) #20	calhm2.1 (ENSSTUG00000006901) #22	ENSSTUG00000006905	pcgf6 (ENSSTUG00000006916) #26	inaa (ENSSTUG00000006947) #27	nt5c2a (ENSSTUG00000006989)	borcs7 (ENSSTUG00000007494) #32	cyp17a1 (ENSSTUG00000007509) #33	fbxw4 (ENSSTUG00000007530)	fgf8a (ENSSTUG00000007553)	slc2a15a (ENSSTUG00000007570)	ENSSTUG00000007746	tlx1 (ENSSTUG00000007752)	ENSSTUG00000007767	cep68 (ENSSTUG00000007773)	ENSSTUG00000007786	ENSSTUG00000007860
Atlantic salmon	MODERN SPECIES	9	SLC18A2 (ENSSSAG00000076093)	kcnk18 (ENSSSAG00000093804)	pla2g4f (ENSSSAG00000076076)	vax1 (ENSSSAG00000101324)	atp6v1ba (ENSSSAG00000076022)	shtn1 (ENSSSAG00000076009)	hspa12a (ENSSSAG00000001820)	ENSSSAG00000075958	H2AW (ENSSSAG00000074192)	ENSSSAG00000074264	ENSSSAG00000074170	ENSSSAG00000074124	ENSSSAG00000085939	ENSSSAG00000072792	ENSSSAG00000072757 #20	ENSSSAG00000101552 #22	pcgf6 (ENSSSAG00000072746) #26	inaa (ENSSSAG00000072742) #27	nt5c2a (ENSSSAG00000069977)	borcs7 (ENSSSAG00000119087) #32	cyp17a1 (ENSSSAG00000069890) #33	fbxw4 (ENSSSAG00000069868)	fgf8a (ENSSSAG00000098674)	slc2a15a (ENSSSAG00000069641)	ENSSSAG00000069628	ENSSSAG00000069622	ENSSSAG00000069615	ENSSSAG00000069562	ENSSSAG00000069556	ENSSSAG00000069555	myoz1a (ENSSSAG00000069550)
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT00940000165789	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000158302.d.a.j.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00950000183054.b.d.j
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000165200.e	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b	ENSGT00950000183054.b.d.j
Coho salmon	MODERN SPECIES	24	slc18a2 (ENSOKIG00005011345)	ENSOKIG00005011313	ENSOKIG00005011296	vax1 (ENSOKIG00005011277)	atp6v1ba (ENSOKIG00005010025)	shtn1 (ENSOKIG00005009885)	hspa12a (ENSOKIG00005009791)	pitx3 (ENSOKIG00005009765)	GBF1 (ENSOKIG00005009693)	macroh2a2 (ENSOKIG00005009648)	ENSOKIG00005009641	ENSOKIG00005009632	ENSOKIG00005009572	hells (ENSOKIG00005009326)	ENSOKIG00005009251 #20	calhm2.1 (ENSOKIG00005009238) #22	ENSOKIG00005009221	pcgf6 (ENSOKIG00005009188) #26	inaa (ENSOKIG00005009179) #27	nt5c2a (ENSOKIG00005008775)	borcs7 (ENSOKIG00005008726) #32	cyp17a1 (ENSOKIG00005008708) #33	fbxw4 (ENSOKIG00005008688)	fgf8a (ENSOKIG00005008657)	slc2a15a (ENSOKIG00005007891)	ENSOKIG00005007829	tlx1 (ENSOKIG00005007814)	ENSOKIG00005007807	cep68 (ENSOKIG00005007798)	ENSOKIG00005007623	SYNPO2L (ENSOKIG00005007597)
Chinook salmon	MODERN SPECIES	30	ENSOTSG00005001104	ENSOTSG00005001092	PDZD8 (ENSOTSG00005001087)	slc18a2 (ENSOTSG00005001033)	kcnk18 (ENSOTSG00005001027)	ENSOTSG00005001025	vax1 (ENSOTSG00005000729)	atp6v1ba (ENSOTSG00005036450)	shtn1 (ENSOTSG00005036449)	hspa12a (ENSOTSG00005036401)	pitx3 (ENSOTSG00005036400)	GBF1 (ENSOTSG00005036267)	macroh2a2 (ENSOTSG00005036265)	ENSOTSG00005036262	hells (ENSOTSG00005036242)	calhm2.1 (ENSOTSG00005036217) #22	ENSOTSG00005036214	ENSOTSG00005036213	pcgf6 (ENSOTSG00005036212) #26	inaa (ENSOTSG00005036210) #27	nt5c2a (ENSOTSG00005035759)	borcs7 (ENSOTSG00005035757) #32	cyp17a1 (ENSOTSG00005035756) #33	fbxw4 (ENSOTSG00005035754)	fgf8a (ENSOTSG00005035753)	slc2a15a (ENSOTSG00005035584)	ENSOTSG00005035582	tlx1 (ENSOTSG00005035580)	ENSOTSG00005035578	cep68 (ENSOTSG00005035576)	ENSOTSG00005035345
Rainbow trout	MODERN SPECIES		ENSOMYG00000010196	SLC18A2 (ENSOMYG00000010158)	ENSOMYG00000010100	ENSOMYG00000010089	vax1 (ENSOMYG00000065891)	atp6v1ba (ENSOMYG00000009477)	shtn1 (ENSOMYG00000009169)	hspa12a (ENSOMYG00000009142)	pitx3 (ENSOMYG00000009122)	ENSOMYG00000007886	macroh2a2 (ENSOMYG00000006631)	ENSOMYG00000073245	ENSOMYG00000006563	hells (ENSOMYG00000005852)	ENSOMYG00000005308	ENSOMYG00000005291 #22	ENSOMYG00000005272	pcgf6 (ENSOMYG00000005228) #26	inaa (ENSOMYG00000005199) #27	nt5c2a (ENSOMYG00000004691)	borcs7 (ENSOMYG00000004037) #32	cyp17a1 (ENSOMYG00000004006) #33	fbxw4 (ENSOMYG00000003974)	fgf8a (ENSOMYG00000060026)	slc2a15a (ENSOMYG00000003788)	ENSOMYG00000003660	tlx1 (ENSOMYG00000003624)	ENSOMYG00000003606	ENSOMYG00000003583	ENSOMYG00000003446	ENSOMYG00000003305
Huchen	MODERN SPECIES	245	ENSHHUG00000048325	PDZD8 (ENSHHUG00000048326)	slc18a2 (ENSHHUG00000048330)	kcnk18 (ENSHHUG00000048340)	ENSHHUG00000048341	vax1 (ENSHHUG00000048353)	atp6v1ba (ENSHHUG00000048354)	shtn1 (ENSHHUG00000048402)	hspa12a (ENSHHUG00000048417)	pitx3 (ENSHHUG00000048444)	ENSHHUG00000048452	macroh2a2 (ENSHHUG00000048480)	ENSHHUG00000048493	ENSHHUG00000048503	hells (ENSHHUG00000048559)	calhm2.1 (ENSHHUG00000048720) #22	ENSHHUG00000048723	pcgf6 (ENSHHUG00000048735) #26	inaa (ENSHHUG00000048740) #27	nt5c2a (ENSHHUG00000048746)	borcs7 (ENSHHUG00000048776) #32	cyp17a1 (ENSHHUG00000048782) #33	ENSHHUG00000048835 #34	fbxw4 (ENSHHUG00000048838)	fgf8a (ENSHHUG00000048858)	slc2a15a (ENSHHUG00000048880)	ENSHHUG00000048893	tlx1 (ENSHHUG00000048896)	ENSHHUG00000048904	cep68 (ENSHHUG00000048907)	ENSHHUG00000048912
Northern pike	MODERN SPECIES	5	slc18a2 (ENSELUG00000013933)	ENSELUG00000013969	vax1 (ENSELUG00000014001)	atp6v1ba (ENSELUG00000014059)	shtn1 (ENSELUG00000001085)	eno4 (ENSELUG00000014183)	hspa12a (ENSELUG00000014254)	PNLIPRP2 (ENSELUG00000014287)	pitx3 (ENSELUG00000014303)	GBF1 (ENSELUG00000014474)	macroh2a2 (ENSELUG00000014527)	ENSELUG00000025259	ENSELUG00000014562	hells (ENSELUG00000014909)	CALHM3 (ENSELUG00000014947) #20	calhm2.1 (ENSELUG00000014966) #22	ENSELUG00000014991	pcgf6 (ENSELUG00000015010) #26	inaa (ENSELUG00000015029) #27	nt5c2a (ENSELUG00000015147)	borcs7 (ENSELUG00000015228) #32	ENSELUG00000001250 #33	ENSELUG00000015261 #33	cyp17a1 (ENSELUG00000014836) #33	fbxw4 (ENSELUG00000015291)	fgf8a (ENSELUG00000015308)	slc2a15a (ENSELUG00000000563)	ENSELUG00000015360	tlx1 (ENSELUG00000015373)	ENSELUG00000024705	cep68 (ENSELUG00000015396)
Otomorpha	ANCESTRAL SPECIES	191						ENSGT00940000162682.A.a.b.b.b	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.b
Otophysi	ANCESTRAL SPECIES	25	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166377.e	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17
Characiphysae_b	ANCESTRAL SPECIES	29	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Characoidei	ANCESTRAL SPECIES	19	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00390000017909.a	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Red-bellied piranha	MODERN SPECIES	45	slka (ENSPNAG00000003068) #16	si:ch211-223p8.8 (ENSPNAG00000003074)	zgc:153981 (ENSPNAG00000003075)	dusp13a (ENSPNAG00000014306)	ENSPNAG00000014321	KAT6B (ENSPNAG00000003109)	adka (ENSPNAG00000014449)	ap3m1 (ENSPNAG00000014489)	vcla (ENSPNAG00000014585)	plaua (ENSPNAG00000014603)	chuk (ENSPNAG00000014647)	gsto2 (ENSPNAG00000014672) #12	itprip (ENSPNAG00000014679) #10	CALHM3 (ENSPNAG00000003213) #20	CALHM1 (ENSPNAG00000014696) #21	calhm2.1 (ENSPNAG00000014705) #22	ENSPNAG00000014735	ENSPNAG00000014738	atoh7 (ENSPNAG00000014747)	PKD2L1 (ENSPNAG00000014784)	tial1 (ENSPNAG00000003272)	bag3 (ENSPNAG00000003286)	inpp5f (ENSPNAG00000003318)	mcmbp (ENSPNAG00000014983)	sec23ip (ENSPNAG00000014993)	csgalnact2 (ENSPNAG00000015022)	ret (ENSPNAG00000015122)	si:dkey-192p21.6 (ENSPNAG00000015170)	ENSPNAG00000015206	pcbd1 (ENSPNAG00000015221)	sgpl1 (ENSPNAG00000015266)
Mexicana tetra	MODERN SPECIES	17	ENSAMXG00000003674	slka (ENSAMXG00000004807) #16	si:ch211-223p8.8 (ENSAMXG00000037235)	dusp13a (ENSAMXG00000031015)	ENSAMXG00000031917	KAT6B (ENSAMXG00000004803)	adka (ENSAMXG00000043014)	ap3m1 (ENSAMXG00000004796)	vcla (ENSAMXG00000004789)	plaua (ENSAMXG00000004782)	chuk (ENSAMXG00000004769)	ENSAMXG00000036436	itprip (ENSAMXG00000025968) #10	CALHM3 (ENSAMXG00000029276) #20	CALHM1 (ENSAMXG00000004757) #21	calhm2.1 (ENSAMXG00000004756) #22	ENSAMXG00000038164	atoh7 (ENSAMXG00000025967)	PKD2L1 (ENSAMXG00000004742)	tial1 (ENSAMXG00000038511)	bag3 (ENSAMXG00000004732)	inpp5f (ENSAMXG00000004725)	mcmbp (ENSAMXG00000004722)	sec23ip (ENSAMXG00000004712)	csgalnact2 (ENSAMXG00000004707)	ret (ENSAMXG00000004705)	si:dkey-192p21.6 (ENSAMXG00000004698)	pcbd1 (ENSAMXG00000030052)	sgpl1 (ENSAMXG00000004674)	neurog3 (ENSAMXG00000040416)	pdlim1 (ENSAMXG00000004659)
Channel catfish	MODERN SPECIES	22	slka (ENSIPUG00000020996) #16	si:ch211-223p8.8 (ENSIPUG00000021038)	zgc:153981 (ENSIPUG00000021042)	DUSP13 (ENSIPUG00000021047)	CALHM1 (ENSIPUG00000021054) #21	kat6b (ENSIPUG00000021062)	adk (ENSIPUG00000021067)	AP3M1 (ENSIPUG00000021086)	vcl (ENSIPUG00000021114)	plau (ENSIPUG00000021154)	chuk (ENSIPUG00000021170)	gsto1 (ENSIPUG00000021201) #12	itprip (ENSIPUG00000021212) #10	CALHM3 (ENSIPUG00000021217) #20	CALHM1 (ENSIPUG00000021223) #21	calhm2.1 (ENSIPUG00000021233) #22	ENSIPUG00000021238	atoh7 (ENSIPUG00000021250)	PKD2L1 (ENSIPUG00000021253)	tial1 (ENSIPUG00000021261)	bag3 (ENSIPUG00000021263)	inpp5f (ENSIPUG00000021274)	mcmbp (ENSIPUG00000021364)	Sec23ip (ENSIPUG00000021437)	CSGALNACT2 (ENSIPUG00000021464)	ret (ENSIPUG00000021488)	si:dkey-192p21.6 (ENSIPUG00000021544)	pcbd1 (ENSIPUG00000021570)	sgpl1 (ENSIPUG00000021596)	ENSIPUG00000021615	Pdlim1 (ENSIPUG00000021620)
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	11																ENSGT01030000234610.b.a.a.e #22	ENSGT00940000166025.b	ENSGT00940000166377.e	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT01050000244968.d	ENSGT00940000158499	ENSGT00390000001491.b	ENSGT00390000007221.a.b	ENSGT00390000000046	ENSGT00940000163077
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	255	ENSGT00940000157372.x	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000155351.a #12	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.e.a #22	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B.o.a	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b	ENSGT00390000001491.b	ENSGT00390000007221.a.b	ENSGT00390000000046.h	ENSGT00940000163077.h	ENSGT00940000155525.b
Cyprininae_a	ANCESTRAL SPECIES	574						ENSGT00940000158184.o	ENSGT01030000234543.D.m.a	ENSGT00940000164426.d.a	ENSGT00950000182937.A.a.o.c	ENSGT00940000155351.a #12	ENSGT00940000163896.j.a	ENSGT01050000244827.D.b.b.a.d #10	ENSGT01030000234610.b.a.b.b.f #20	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.f.b #22	ENSGT01030000234610.b.a.a.e.a #22
Golden-line barbel	MODERN SPECIES	679						ap3m1 (ENSSGRG00000024984)	vcla (ENSSGRG00000025185)	plaua (ENSSGRG00000026457)	chuk (ENSSGRG00000026460)	gsto1 (ENSSGRG00000027626) #12	ENSSGRG00000027627	itprip (ENSSGRG00000027628) #10	CALHM3 (ENSSGRG00000027629) #20	CALHM2 (ENSSGRG00000027630) #22	CALHM1 (ENSSGRG00000027631) #21	calhm2.1 (ENSSGRG00000027632) #22	ENSSGRG00000027633	ENSSGRG00000027635	ENSSGRG00000027636	PKD2L1 (ENSSGRG00000027637)	TIAL1 (ENSSGRG00000027638)	bag3 (ENSSGRG00000027959)	inpp5f (ENSSGRG00000027963)	mcmbp (ENSSGRG00000027994)	sec23ip (ENSSGRG00000028472)	csgalnact2 (ENSSGRG00000028876)	ret (ENSSGRG00000028886)	ENSSGRG00000029140	pcbd1 (ENSSGRG00000029143)	sgpl1 (ENSSGRG00000029205)	neurog3 (ENSSGRG00000030036)
Common carp reference	MODERN SPECIES	18	ENSCCRG00000010032 #16	ENSCCRG00000010300	ENSCCRG00000010306	KAT6B (ENSCCRG00000073616)	adka (ENSCCRG00000042385)	ap3m1 (ENSCCRG00000020600)	vcla (ENSCCRG00000005235)	plaua (ENSCCRG00000016933)	chuk (ENSCCRG00000008205)	ENSCCRG00000009627	ENSCCRG00000072289	itprip (ENSCCRG00000058077) #10	CALHM3 (ENSCCRG00000009658) #20	ENSCCRG00000011579 #21	CALHM2 (ENSCCRG00000011582) #22	calhm2.1 (ENSCCRG00000009665) #22	ENSCCRG00000056336	atoh7 (ENSCCRG00000065383)	ENSCCRG00000009672	ENSCCRG00000009677	tial1 (ENSCCRG00000000329)	bag3 (ENSCCRG00000001081)	inpp5f (ENSCCRG00000059458)	mcmbp (ENSCCRG00000070447)	sec23ip (ENSCCRG00000047654)	csgalnact2 (ENSCCRG00000047900)	ret (ENSCCRG00000047916)	pcbd1 (ENSCCRG00000054537)	sgpl1 (ENSCCRG00000048047)	neurog3 (ENSCCRG00000048057)	pdlim1 (ENSCCRG00000048060)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	4	pgbd5 (ENSCARG00000010662)	cog2 (ENSCARG00000010383)	agt (ENSCARG00000010368)	ENSCARG00000010345	sf3b5 (ENSCARG00000010337)	oprm1 (ENSCARG00000010320)	ccdc85a (ENSCARG00000010312)	soul2 (ENSCARG00000010302)	SLC24A3 (ENSCARG00000010214)	RIN2 (ENSCARG00000010192)	slc17a5 (ENSCARG00000009751)	eef1a1a (ENSCARG00000009726)	CGAS (ENSCARG00000009722) ##10	KCNQ5 (ENSCARG00000009712)	CALHM1 (ENSCARG00000009708) #21	calhm2.1 (ENSCARG00000009704) #22	ENSCARG00000009697	tial1 (ENSCARG00000009663)	ENSCARG00000009660	ENSCARG00000009656	ENSCARG00000009651	csgalnact2 (ENSCARG00000009645)	ret (ENSCARG00000009557)	ENSCARG00000009538	pcbd1 (ENSCARG00000009520)	sgpl1 (ENSCARG00000007537)	neurog3 (ENSCARG00000007434)	pdlim1 (ENSCARG00000007425)	rel (ENSCARG00000007396)	papolg (ENSCARG00000005227)	bcl11aa (ENSCARG00000005154)
Goldfish	MODERN SPECIES	4	ENSCARG00000066741	ENSCARG00000066737	ENSCARG00000066734	FAM83B (ENSCARG00000066727)	sft2d1 (ENSCARG00000066718)	RPS6KA2 (ENSCARG00000066514)	rnaset2 (ENSCARG00000066473)	ENSCARG00000066458	MYOM2 (ENSCARG00000065782)	RNF213 (ENSCARG00000065539)	prorsd1 (ENSCARG00000065502)	ENSCARG00000065495	CCDC88A (ENSCARG00000063962)	ENSCARG00000063886	zgc:123295 (ENSCARG00000063882)	calhm2.1 (ENSCARG00000063872) #22	ENSCARG00000063854	tial1 (ENSCARG00000063712)	ENSCARG00000063696	ENSCARG00000063676	rgs17 (ENSCARG00000063664)	ENSCARG00000063550	il22ra2 (ENSCARG00000063530)	rab1ab (ENSCARG00000063350)	tbp (ENSCARG00000063161)	rhoua (ENSCARG00000063145)	rab4a (ENSCARG00000063134)	epas1b (ENSCARG00000062718)	DHX57 (ENSCARG00000062466)	atl2 (ENSCARG00000056846)	hells (ENSCARG00000056179)
Cyprininae	ANCESTRAL SPECIES	255			ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000155351.a #12	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.e.a #22	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B.o.a	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b	ENSGT00390000001491.b
Goldfish	MODERN SPECIES	31	dusp13a (ENSCARG00000025220)	KAT6B (ENSCARG00000025130)	ENSCARG00000025085	ENSCARG00000025064	adka (ENSCARG00000024900)	ap3m1 (ENSCARG00000024857)	vcla (ENSCARG00000022981)	plaua (ENSCARG00000024413)	chuk (ENSCARG00000022486)	gsto1 (ENSCARG00000022430) #12	gsto2 (ENSCARG00000022424) #12	itprip (ENSCARG00000022419) #10	CALHM3 (ENSCARG00000022411) #20	CALHM1 (ENSCARG00000022404) #21	CALHM2 (ENSCARG00000022392) #22	calhm2.1 (ENSCARG00000022389) #22	ENSCARG00000022371	ENSCARG00000022359	atoh7 (ENSCARG00000022355)	PKD2L1 (ENSCARG00000022338)	tial1 (ENSCARG00000022215)	bag3 (ENSCARG00000022204)	inpp5f (ENSCARG00000020211)	mcmbp (ENSCARG00000019437)	sec23ip (ENSCARG00000018268)	csgalnact2 (ENSCARG00000018221)	ret (ENSCARG00000016835)	ENSCARG00000016780	pcbd1 (ENSCARG00000016766)	sgpl1 (ENSCARG00000014326)	neurog3 (ENSCARG00000014257)
Cyprininae_a	ANCESTRAL SPECIES	101	ENSGT00940000162682.A.a.b.b.b.a	ENSGT00940000162682.A.a.b.a.a	ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00390000014320.c.b.f	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000163896.j.b	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f.a #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274.c	ENSGT00940000154962.B.o.a	ENSGT00940000160482	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b	ENSGT00390000001491.b	ENSGT00390000007221.a.b.r
Common carp reference	MODERN SPECIES	48	ENSCCRG00000001665	KAT6B (ENSCCRG00000076159)	adka (ENSCCRG00000035773)	ap3m1 (ENSCCRG00000064818)	vcla (ENSCCRG00000007539)	ENSCCRG00000067872	ENSCCRG00000070787	plaua (ENSCCRG00000005596)	chuk (ENSCCRG00000005719)	ENSCCRG00000009407	ENSCCRG00000009650	itprip (ENSCCRG00000055969) #10	CALHM3 (ENSCCRG00000011575) #20	ENSCCRG00000048006 #21	CALHM2 (ENSCCRG00000079939) #22	calhm2.1 (ENSCCRG00000079601) #22	ENSCCRG00000079239	ENSCCRG00000000125	atoh7 (ENSCCRG00000074674)	ENSCCRG00000000176	tial1 (ENSCCRG00000038311)	inpp5f (ENSCCRG00000001168)	mcmbp (ENSCCRG00000007459)	sec23ip (ENSCCRG00000009707)	csgalnact2 (ENSCCRG00000011272)	ret (ENSCCRG00000011287)	si:dkey-192p21.6 (ENSCCRG00000060984)	pcbd1 (ENSCCRG00000061538)	sgpl1 (ENSCCRG00000015634)	pdlim1 (ENSCCRG00000030006)	rel (ENSCCRG00000049637)
Golden-line barbel	MODERN SPECIES	312	slka (ENSSGRG00000000567) #16	si:ch211-223p8.8 (ENSSGRG00000005775)	zgc:153981 (ENSSGRG00000005772)	dusp13a (ENSSGRG00000005778)	ENSSGRG00000005780	KAT6B (ENSSGRG00000005783)	adka (ENSSGRG00000005813)	ap3m1 (ENSSGRG00000007447)	vcla (ENSSGRG00000007879)	plaua (ENSSGRG00000008491)	chuk (ENSSGRG00000008557)	ENSSGRG00000010509	itprip (ENSSGRG00000010513) #10	CALHM1 (ENSSGRG00000010516) #21	CALHM2 (ENSSGRG00000010520) #22	calhm2.1 (ENSSGRG00000010524) #22	ENSSGRG00000010526	ENSSGRG00000010527	atoh7 (ENSSGRG00000010529)	PKD2L1 (ENSSGRG00000010531)	TIAL1 (ENSSGRG00000010579)	bag3 (ENSSGRG00000012148)	inpp5f (ENSSGRG00000012151)	mcmbp (ENSSGRG00000012248)	ENSSGRG00000012403	ENSSGRG00000012404	csgalnact2 (ENSSGRG00000012405)	ret (ENSSGRG00000012407)	ENSSGRG00000012408	pcbd1 (ENSSGRG00000012410)	sgpl1 (ENSSGRG00000012424)
Zebrafish	MODERN SPECIES	4	zgc:153981 (ENSDARG00000069529)	dusp13a (ENSDARG00000061498)	ENSDARG00000094665	KAT6B (ENSDARG00000055429)	adka (ENSDARG00000039429)	ap3m1 (ENSDARG00000029928)	vcla (ENSDARG00000044968)	chuk (ENSDARG00000011662)	plaua (ENSDARG00000075265)	gsto1 (ENSDARG00000022183) #12	gsto2 (ENSDARG00000033285) #12	itprip (ENSDARG00000015576) #10	CALHM3 (ENSDARG00000079602) #20	CALHM1 (ENSDARG00000077021) #21	CALHM2 (ENSDARG00000074179) #22	calhm2.1 (ENSDARG00000039482) #22	ENSDARG00000039483	atoh7 (ENSDARG00000069552)	PKD2L1 (ENSDARG00000022503)	tial1 (ENSDARG00000009525)	bag3 (ENSDARG00000039486)	inpp5f (ENSDARG00000061437)	mcmbp (ENSDARG00000055314)	sec23ip (ENSDARG00000061413)	csgalnact2 (ENSDARG00000061400)	ret (ENSDARG00000055305)	si:dkey-192p21.6 (ENSDARG00000091212)	pcbd1 (ENSDARG00000031981)	sgpl1 (ENSDARG00000061375)	neurog3 (ENSDARG00000016951)	pdlim1 (ENSDARG00000019845)
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351.a #12	ENSGT00940000163896	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a.f #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a.e	ENSGT01020000231101	ENSGT00520000055635.c.a.a.a.f	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18
Cyprininae	ANCESTRAL SPECIES	255				ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000155351.a #12	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.e.a #22	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B.o.a	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b
Cyprininae_a	DUPLICATION
Cyprininae_a	ANCESTRAL SPECIES	101	ENSGT00940000156184.b.a #16	ENSGT00940000162682.A.a.b.b.b.a	ENSGT00940000162682.A.a.b.a.a	ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00390000014320.c.b.f	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000163896.j.b	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f.a #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274.c	ENSGT00940000154962.B.o.a	ENSGT00940000160482	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b	ENSGT00390000001491.b
Golden-line barbel	MODERN SPECIES	312	ENSSGRG00000000472	slka (ENSSGRG00000000567) #16	si:ch211-223p8.8 (ENSSGRG00000005775)	zgc:153981 (ENSSGRG00000005772)	dusp13a (ENSSGRG00000005778)	ENSSGRG00000005780	KAT6B (ENSSGRG00000005783)	adka (ENSSGRG00000005813)	ap3m1 (ENSSGRG00000007447)	vcla (ENSSGRG00000007879)	plaua (ENSSGRG00000008491)	chuk (ENSSGRG00000008557)	ENSSGRG00000010509	itprip (ENSSGRG00000010513) #10	CALHM1 (ENSSGRG00000010516) #21	CALHM2 (ENSSGRG00000010520) #22	calhm2.1 (ENSSGRG00000010524) #22	ENSSGRG00000010526	ENSSGRG00000010527	atoh7 (ENSSGRG00000010529)	PKD2L1 (ENSSGRG00000010531)	TIAL1 (ENSSGRG00000010579)	bag3 (ENSSGRG00000012148)	inpp5f (ENSSGRG00000012151)	mcmbp (ENSSGRG00000012248)	ENSSGRG00000012403	ENSSGRG00000012404	csgalnact2 (ENSSGRG00000012405)	ret (ENSSGRG00000012407)	ENSSGRG00000012408	pcbd1 (ENSSGRG00000012410)
Common carp reference	MODERN SPECIES	48	dusp13a (ENSCCRG00000063186)	ENSCCRG00000001665	KAT6B (ENSCCRG00000076159)	adka (ENSCCRG00000035773)	ap3m1 (ENSCCRG00000064818)	vcla (ENSCCRG00000007539)	ENSCCRG00000067872	ENSCCRG00000070787	plaua (ENSCCRG00000005596)	chuk (ENSCCRG00000005719)	ENSCCRG00000009407	ENSCCRG00000009650	itprip (ENSCCRG00000055969) #10	CALHM3 (ENSCCRG00000011575) #20	ENSCCRG00000048006 #21	CALHM2 (ENSCCRG00000079939) #22	calhm2.1 (ENSCCRG00000079601) #22	ENSCCRG00000079239	ENSCCRG00000000125	atoh7 (ENSCCRG00000074674)	ENSCCRG00000000176	tial1 (ENSCCRG00000038311)	inpp5f (ENSCCRG00000001168)	mcmbp (ENSCCRG00000007459)	sec23ip (ENSCCRG00000009707)	csgalnact2 (ENSCCRG00000011272)	ret (ENSCCRG00000011287)	si:dkey-192p21.6 (ENSCCRG00000060984)	pcbd1 (ENSCCRG00000061538)	sgpl1 (ENSCCRG00000015634)	pdlim1 (ENSCCRG00000030006)
Cyprininae_a	ANCESTRAL SPECIES	574							ENSGT00940000158184.o	ENSGT01030000234543.D.m.a	ENSGT00940000164426.d.a	ENSGT00950000182937.A.a.o.c	ENSGT00940000155351.a #12	ENSGT00940000163896.j.a	ENSGT01050000244827.D.b.b.a.d #10	ENSGT01030000234610.b.a.b.b.f #20	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.f.b #22	ENSGT01030000234610.b.a.a.e.a #22
Golden-line barbel	MODERN SPECIES	679								ap3m1 (ENSSGRG00000024984)	vcla (ENSSGRG00000025185)	plaua (ENSSGRG00000026457)	chuk (ENSSGRG00000026460)	gsto1 (ENSSGRG00000027626) #12	ENSSGRG00000027627	itprip (ENSSGRG00000027628) #10	CALHM3 (ENSSGRG00000027629) #20	CALHM2 (ENSSGRG00000027630) #22	CALHM1 (ENSSGRG00000027631) #21	calhm2.1 (ENSSGRG00000027632) #22	ENSSGRG00000027633	ENSSGRG00000027635	ENSSGRG00000027636	PKD2L1 (ENSSGRG00000027637)	TIAL1 (ENSSGRG00000027638)	bag3 (ENSSGRG00000027959)	inpp5f (ENSSGRG00000027963)	mcmbp (ENSSGRG00000027994)	sec23ip (ENSSGRG00000028472)	csgalnact2 (ENSSGRG00000028876)	ret (ENSSGRG00000028886)	ENSSGRG00000029140	pcbd1 (ENSSGRG00000029143)
Common carp reference	MODERN SPECIES	18	ENSCCRG00000072378	ENSCCRG00000010032 #16	ENSCCRG00000010300	ENSCCRG00000010306	KAT6B (ENSCCRG00000073616)	adka (ENSCCRG00000042385)	ap3m1 (ENSCCRG00000020600)	vcla (ENSCCRG00000005235)	plaua (ENSCCRG00000016933)	chuk (ENSCCRG00000008205)	ENSCCRG00000009627	ENSCCRG00000072289	itprip (ENSCCRG00000058077) #10	CALHM3 (ENSCCRG00000009658) #20	ENSCCRG00000011579 #21	CALHM2 (ENSCCRG00000011582) #22	calhm2.1 (ENSCCRG00000009665) #22	ENSCCRG00000056336	atoh7 (ENSCCRG00000065383)	ENSCCRG00000009672	ENSCCRG00000009677	tial1 (ENSCCRG00000000329)	bag3 (ENSCCRG00000001081)	inpp5f (ENSCCRG00000059458)	mcmbp (ENSCCRG00000070447)	sec23ip (ENSCCRG00000047654)	csgalnact2 (ENSCCRG00000047900)	ret (ENSCCRG00000047916)	pcbd1 (ENSCCRG00000054537)	sgpl1 (ENSCCRG00000048047)	neurog3 (ENSCCRG00000048057)
Goldfish	MODERN SPECIES	31	zgc:153981 (ENSCARG00000025278)	dusp13a (ENSCARG00000025220)	KAT6B (ENSCARG00000025130)	ENSCARG00000025085	ENSCARG00000025064	adka (ENSCARG00000024900)	ap3m1 (ENSCARG00000024857)	vcla (ENSCARG00000022981)	plaua (ENSCARG00000024413)	chuk (ENSCARG00000022486)	gsto1 (ENSCARG00000022430) #12	gsto2 (ENSCARG00000022424) #12	itprip (ENSCARG00000022419) #10	CALHM3 (ENSCARG00000022411) #20	CALHM1 (ENSCARG00000022404) #21	CALHM2 (ENSCARG00000022392) #22	calhm2.1 (ENSCARG00000022389) #22	ENSCARG00000022371	ENSCARG00000022359	atoh7 (ENSCARG00000022355)	PKD2L1 (ENSCARG00000022338)	tial1 (ENSCARG00000022215)	bag3 (ENSCARG00000022204)	inpp5f (ENSCARG00000020211)	mcmbp (ENSCARG00000019437)	sec23ip (ENSCARG00000018268)	csgalnact2 (ENSCARG00000018221)	ret (ENSCARG00000016835)	ENSCARG00000016780	pcbd1 (ENSCARG00000016766)	sgpl1 (ENSCARG00000014326)
Zebrafish	MODERN SPECIES	4	ENSDARG00000111496	zgc:153981 (ENSDARG00000069529)	dusp13a (ENSDARG00000061498)	ENSDARG00000094665	KAT6B (ENSDARG00000055429)	adka (ENSDARG00000039429)	ap3m1 (ENSDARG00000029928)	vcla (ENSDARG00000044968)	chuk (ENSDARG00000011662)	plaua (ENSDARG00000075265)	gsto1 (ENSDARG00000022183) #12	gsto2 (ENSDARG00000033285) #12	itprip (ENSDARG00000015576) #10	CALHM3 (ENSDARG00000079602) #20	CALHM1 (ENSDARG00000077021) #21	CALHM2 (ENSDARG00000074179) #22	calhm2.1 (ENSDARG00000039482) #22	ENSDARG00000039483	atoh7 (ENSDARG00000069552)	PKD2L1 (ENSDARG00000022503)	tial1 (ENSDARG00000009525)	bag3 (ENSDARG00000039486)	inpp5f (ENSDARG00000061437)	mcmbp (ENSDARG00000055314)	sec23ip (ENSDARG00000061413)	csgalnact2 (ENSDARG00000061400)	ret (ENSDARG00000055305)	si:dkey-192p21.6 (ENSDARG00000091212)	pcbd1 (ENSDARG00000031981)	sgpl1 (ENSDARG00000061375)	neurog3 (ENSDARG00000016951)
Clupeiformes	ANCESTRAL SPECIES	741															ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	4	CGAS (ENSCHAG00000027752) ##10	CGAS (ENSCHAG00000027756) ##10	EEF1A1 (ENSCHAG00000027762)	slc17a5 (ENSCHAG00000027772)	FAM98A (ENSCHAG00000027781)	rasgrp3 (ENSCHAG00000027785)	LTBP1 (ENSCHAG00000027822)	ttc27 (ENSCHAG00000027846)	BIRC6 (ENSCHAG00000027855)	BICC1 (ENSCHAG00000027860)	phyhipla (ENSCHAG00000027861)	slc18a2 (ENSCHAG00000027862)	ENSCHAG00000027864	GCNT3 (ENSCHAG00000027866)	CALHM3 (ENSCHAG00000027867) #20	CALHM2 (ENSCHAG00000027869) #22	CALHM2 (ENSCHAG00000000402) #22	ENSCHAG00000000467	ENSCHAG00000000732	malb (ENSCHAG00000000844)	ENSCHAG00000000931	mrps5 (ENSCHAG00000001150)	slc8a1b (ENSCHAG00000001685)	trim8a (ENSCHAG00000001725) #37	sufu (ENSCHAG00000001799)	ENSCHAG00000002897	SEMA4G (ENSCHAG00000002969)	znhit1 (ENSCHAG00000003213)	TWNK (ENSCHAG00000003234)	lzts2a (ENSCHAG00000003255)	pdzd7a (ENSCHAG00000003277)
Atlantic herring	MODERN SPECIES	4	CGAS (ENSCHAG00000027756) ##10	EEF1A1 (ENSCHAG00000027762)	slc17a5 (ENSCHAG00000027772)	FAM98A (ENSCHAG00000027781)	rasgrp3 (ENSCHAG00000027785)	LTBP1 (ENSCHAG00000027822)	ttc27 (ENSCHAG00000027846)	BIRC6 (ENSCHAG00000027855)	BICC1 (ENSCHAG00000027860)	phyhipla (ENSCHAG00000027861)	slc18a2 (ENSCHAG00000027862)	ENSCHAG00000027864	GCNT3 (ENSCHAG00000027866)	CALHM3 (ENSCHAG00000027867) #20	CALHM2 (ENSCHAG00000027869) #22	CALHM2 (ENSCHAG00000000402) #22	ENSCHAG00000000467	ENSCHAG00000000732	malb (ENSCHAG00000000844)	ENSCHAG00000000931	mrps5 (ENSCHAG00000001150)	slc8a1b (ENSCHAG00000001685)	trim8a (ENSCHAG00000001725) #37	sufu (ENSCHAG00000001799)	ENSCHAG00000002897	SEMA4G (ENSCHAG00000002969)	znhit1 (ENSCHAG00000003213)	TWNK (ENSCHAG00000003234)	lzts2a (ENSCHAG00000003255)	pdzd7a (ENSCHAG00000003277)	ENSCHAG00000003308
Osteoglossiformes	ANCESTRAL SPECIES	94							ENSGT00940000156184.a.l #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.c #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031
Asian bonytongue	MODERN SPECIES	19							ENSSFOG00015013008 ##7	ENSSFOG00015012935 ##19	SLK (ENSSFOG00015012846) #16	SFR1 (ENSSFOG00015028199) #14	CFAP43 (ENSSFOG00015012763) #13	ENSSFOG00015012731	itprip (ENSSFOG00015029908) #10	CALHM3 (ENSSFOG00015012698) #20	CALHM1 (ENSSFOG00015012690) #21	calhm2.1 (ENSSFOG00015025842) #22	nt5c2a (ENSSFOG00015012548)	fbxw4 (ENSSFOG00015012488)	fgf8a (ENSSFOG00015012408)	slc2a15a (ENSSFOG00015012364)	TLX1 (ENSSFOG00015026057)	SDHAF4 (ENSSFOG00015030247)	b3gat2 (ENSSFOG00015028654)	OGFRL1 (ENSSFOG00015024337)	asrgl1 (ENSSFOG00015012313)	ENSSFOG00015012291	ENSSFOG00015003071	ddx43 (ENSSFOG00015012193)	CGAS (ENSSFOG00015012161) ##10	EEF1A1 (ENSSFOG00015012136)	slc17a5 (ENSSFOG00015012119)
P. kingsleyae	MODERN SPECIES	11	CTBP2 (ENSPKIG00000001178)	EDRF1 (ENSPKIG00000001321)	tex36 (ENSPKIG00000001448)	ADAM12 (ENSPKIG00000001470)	ENSPKIG00000001535	INSYN2A (ENSPKIG00000001600)	SLK (ENSPKIG00000001638) #16	ENSPKIG00000001737	sfr1 (ENSPKIG00000001887) #14	ENSPKIG00000001908 #13	ENSPKIG00000001925	gsto2 (ENSPKIG00000001946) #12	itprip (ENSPKIG00000001965) #10	CALHM3 (ENSPKIG00000001981) #20	CALHM1 (ENSPKIG00000002001) #21	calhm2.1 (ENSPKIG00000002024) #22	ENSPKIG00000002038	taf5 (ENSPKIG00000002076) #25	INA (ENSPKIG00000002123) #27	nt5c2a (ENSPKIG00000002181)	cnnm2a (ENSPKIG00000002307) #30	WBP1L (ENSPKIG00000002346) #34	fbxw4 (ENSPKIG00000002375)	fgf8a (ENSPKIG00000002430)	slc2a15a (ENSPKIG00000002478)	ENSPKIG00000002553	tlx1 (ENSPKIG00000002563)	smap1 (ENSPKIG00000002589)	b3gat2 (ENSPKIG00000002632)	OGFRL1 (ENSPKIG00000002645)	asrgl1 (ENSPKIG00000002669)
Spotted gar	MODERN SPECIES	671	ENSLOCG00000011997 ##7	ENSLOCG00000011988 ##7	cfap58 (ENSLOCG00000011978) #9	neurl1aa (ENSLOCG00000011969) #19	SH3PXD2A (ENSLOCG00000011958) #18	stn1 (ENSLOCG00000011951) #17	slka (ENSLOCG00000011943) #16	ENSLOCG00000011911	ENSLOCG00000011901	sfr1 (ENSLOCG00000011891) #14	CFAP43 (ENSLOCG00000011880) #13	gsto2 (ENSLOCG00000011872) #12	itprip (ENSLOCG00000011865) #10	CALHM3 (ENSLOCG00000011856) #20	CALHM1 (ENSLOCG00000011849) #21	calhm2.1 (ENSLOCG00000011840) #22	zgc:175214 (ENSLOCG00000011833)	pdcd11 (ENSLOCG00000011818) #23	atp5md (ENSLOCG00000011809)	taf5 (ENSLOCG00000011799) #25	pcgf6 (ENSLOCG00000011792) #26	inab (ENSLOCG00000011782) #27	nt5c2b (ENSLOCG00000011770)	cnnm2a (ENSLOCG00000011756) #30	as3mt (ENSLOCG00000011748) #31	borcs7 (ENSLOCG00000011739) #32	cyp17a1 (ENSLOCG00000011729) #33	wbp1la (ENSLOCG00000011721) #34	poll (ENSLOCG00000011706)	dpcd (ENSLOCG00000011698)	fbxw4 (ENSLOCG00000011687)
Reedfish	MODERN SPECIES	10	ENSECRG00000006958	ENSECRG00000007017 ##7	ENSECRG00000007079	cfap58 (ENSECRG00000007087) #9	neurl1aa (ENSECRG00000007103) #19	SH3PXD2A (ENSECRG00000007116) #18	stn1 (ENSECRG00000007127) #17	slka (ENSECRG00000007144) #16	ENSECRG00000007182	sfr1 (ENSECRG00000007226) #14	ENSECRG00000007238 #13	gsto2 (ENSECRG00000007253) #12	itprip (ENSECRG00000007263) #10	CALHM3 (ENSECRG00000007274) #20	CALHM1 (ENSECRG00000007283) #21	calhm2.1 (ENSECRG00000007287) #22	ENSECRG00000007296	ENSECRG00000007304	ENSECRG00000007314	ENSECRG00000007317	pxmp2 (ENSECRG00000007325)	zgc:175214 (ENSECRG00000007332)	inab (ENSECRG00000007342) #27	nt5c2b (ENSECRG00000007361)	ENSECRG00000007387 #30	cnnm2a (ENSECRG00000007397) #30	as3mt (ENSECRG00000007410) #31	borcs7 (ENSECRG00000007423) #32	cyp17a1 (ENSECRG00000007434) #33	wbp1la (ENSECRG00000007447) #34	poll (ENSECRG00000007457)
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a.b.a #21
Euteleostomi	ANCESTRAL SPECIES	141															ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00390000005029
Sarcopterygii	ANCESTRAL SPECIES	124															ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000155737.a.b ##36
Tetrapoda	ANCESTRAL SPECIES	39						ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Amniota	ANCESTRAL SPECIES	10	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Theria	ANCESTRAL SPECIES	26	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Hyrax	MODERN SPECIES	11743																CALHM1 (ENSPCAG00000002463) #21
Elephant	MODERN SPECIES	3	SORCS1 (ENSLAFG00000014509) #7	SORCS3 (ENSLAFG00000009226) #8	CFAP58 (ENSLAFG00000010295) #9	ITPRIP (ENSLAFG00000001113) #10	GSTO2 (ENSLAFG00000000236) #11	GSTO1 (ENSLAFG00000022681) #12	ENSLAFG00000027860 #13	ENSLAFG00000000231 #13	SFR1 (ENSLAFG00000000228) #14	COL17A1 (ENSLAFG00000011870) #15	SLK (ENSLAFG00000011452) #16	STN1 (ENSLAFG00000004232) #17	SH3PXD2A (ENSLAFG00000022244) #18	NEURL1 (ENSLAFG00000015401) #19	CALHM3 (ENSLAFG00000026450) #20	CALHM1 (ENSLAFG00000008404) #21	CALHM2 (ENSLAFG00000008403) #22	PDCD11 (ENSLAFG00000008398) #23	ATP5MK (ENSLAFG00000008395) #24	TAF5 (ENSLAFG00000008391) #25	PCGF6 (ENSLAFG00000008386) #26	INA (ENSLAFG00000008383) #27	NT5C2 (ENSLAFG00000012056) #29	CNNM2 (ENSLAFG00000012051) #30	AS3MT (ENSLAFG00000012045) #31	ENSLAFG00000020646 #32	CYP17A1 (ENSLAFG00000002044) #33	WBP1L (ENSLAFG00000002043) #34	SFXN2 (ENSLAFG00000005072) #35	ARL3 (ENSLAFG00000005070) #36	TRIM8 (ENSLAFG00000011454) #37
Tenrec	MODERN SPECIES	4355																CALHM1 (ENSETEG00000005650) #21	ENSETEG00000005647 #24	TAF5 (ENSETEG00000005642) #25
Xenarthra	ANCESTRAL SPECIES	61													ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Armadillo	MODERN SPECIES	3168													SH3PXD2A (ENSDNOG00000049739) #18	NEURL1 (ENSDNOG00000040304) #19	CALHM3 (ENSDNOG00000009406) #20	CALHM1 (ENSDNOG00000013901) #21	CALHM2 (ENSDNOG00000013897) #22	PDCD11 (ENSDNOG00000013838) #23	ATP5MK (ENSDNOG00000013833) #24	TAF5 (ENSDNOG00000035792) #25	PCGF6 (ENSDNOG00000034623) #26	INA (ENSDNOG00000002852) #27	NT5C2 (ENSDNOG00000000151) #29	ENSDNOG00000000149 #30
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Suina	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Pig	MODERN SPECIES	5	SORCS1 (ENSSSCG00000030026) #7	SORCS3 (ENSSSCG00000010617) #8	CFAP58 (ENSSSCG00000010614) #9	ITPRIP (ENSSSCG00000010613) #10	GSTO2 (ENSSSCG00000030271) #11	GSTO1 (ENSSSCG00000022351) #12	ENSSSCG00000010610 #12	CFAP43 (ENSSSCG00000010609) #13	SFR1 (ENSSSCG00000010608) #14	COL17A1 (ENSSSCG00000010607) #15	SLK (ENSSSCG00000010606) #16	STN1 (ENSSSCG00000010605) #17	SH3PXD2A (ENSSSCG00000010604) #18	NEURL1 (ENSSSCG00000010603) #19	CALHM3 (ENSSSCG00000034671) #20	CALHM1 (ENSSSCG00000010601) #21	CALHM2 (ENSSSCG00000010600) #22	PDCD11 (ENSSSCG00000010599) #23	ATP5MK (ENSSSCG00000032165) #24	TAF5 (ENSSSCG00000010597) #25	PCGF6 (ENSSSCG00000020954) #26	INA (ENSSSCG00000010595) #27	NT5C2 (ENSSSCG00000010594) #29	CNNM2 (ENSSSCG00000010593) #30	AS3MT (ENSSSCG00000010592) #31	BORCS7 (ENSSSCG00000038633) #32	CYP17A1 (ENSSSCG00000010591) #33	WBP1L (ENSSSCG00000029594) #34	SFXN2 (ENSSSCG00000010589) #35	ARL3 (ENSSSCG00000031782) #36	TRIM8 (ENSSSCG00000038856) #37
Chacoan peccary	MODERN SPECIES	955	XPNPEP1 (ENSCWAG00000021611)	SORCS1 (ENSCWAG00000021655) #7	SORCS3 (ENSCWAG00000021774) #8	CFAP58 (ENSCWAG00000021795) #9	ITPRIP (ENSCWAG00000021802) #10	GSTO2 (ENSCWAG00000021807) #11	GSTO1 (ENSCWAG00000021817) #12	CFAP43 (ENSCWAG00000021831) #13	SFR1 (ENSCWAG00000010419) #14	COL17A1 (ENSCWAG00000010502) #15	SLK (ENSCWAG00000011479) #16	STN1 (ENSCWAG00000011621) #17	SH3PXD2A (ENSCWAG00000011699) #18	NEURL1 (ENSCWAG00000011779) #19	CALHM3 (ENSCWAG00000011859) #20	CALHM1 (ENSCWAG00000011899) #21	CALHM2 (ENSCWAG00000011925) #22	PDCD11 (ENSCWAG00000011961) #23	ATP5MK (ENSCWAG00000012035) #24	TAF5 (ENSCWAG00000012095) #25	PCGF6 (ENSCWAG00000012211) #26	INA (ENSCWAG00000012252) #27	NT5C2 (ENSCWAG00000012289) #29	CNNM2 (ENSCWAG00000012366) #30	AS3MT (ENSCWAG00000012429) #31	BORCS7 (ENSCWAG00000012528) #32	ENSCWAG00000012570	CYP17A1 (ENSCWAG00000012610) #33	WBP1L (ENSCWAG00000013043) #34	ENSCWAG00000013109 #35	ARL3 (ENSCWAG00000013159) #36
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Arabian camel	MODERN SPECIES	2	XPNPEP1 (ENSCDRG00005006270)	SORCS1 (ENSCDRG00005006479) #7	SORCS3 (ENSCDRG00005007469) #8	CFAP58 (ENSCDRG00005008105) #9	ITPRIP (ENSCDRG00005008196) #10	GSTO2 (ENSCDRG00005008226) #11	GSTO1 (ENSCDRG00005008349) #12	CFAP43 (ENSCDRG00005008504) #13	SFR1 (ENSCDRG00005008585) #14	COL17A1 (ENSCDRG00005008684) #15	SLK (ENSCDRG00005010331) #16	STN1 (ENSCDRG00005010608) #17	SH3PXD2A (ENSCDRG00005010700) #18	NEURL1 (ENSCDRG00005010923) #19	CALHM3 (ENSCDRG00005011030) #20	CALHM1 (ENSCDRG00005011070) #21	CALHM2 (ENSCDRG00005011123) #22	PDCD11 (ENSCDRG00005011201) #23	ENSCDRG00005011960 #24	TAF5 (ENSCDRG00005011985) #25	PCGF6 (ENSCDRG00005012063) #26	INA (ENSCDRG00005012311) #27	NT5C2 (ENSCDRG00005012355) #29	CNNM2 (ENSCDRG00005012708) #30	AS3MT (ENSCDRG00005012899) #31	BORCS7 (ENSCDRG00005013001) #32	CYP17A1 (ENSCDRG00005013042) #33	WBP1L (ENSCDRG00005013170) #34	SFXN2 (ENSCDRG00005013237) #35	ARL3 (ENSCDRG00005013316) #36	TRIM8 (ENSCDRG00005013435) #37
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Cetacea	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m #34
Odontoceti	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m #34	ENSGT01030000234641.b.a.a #35
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00390000014084.ab.b.a	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Narwhal	MODERN SPECIES	311	ENSMMNG00015014354	ENSMMNG00015014339	SORCS3 (ENSMMNG00015014281) #8	CFAP58 (ENSMMNG00015014243) #9	ITPRIP (ENSMMNG00015014222) #10	GSTO2 (ENSMMNG00015014209) #11	GSTO1 (ENSMMNG00015014192) #12	CFAP43 (ENSMMNG00015014169) #13	SFR1 (ENSMMNG00015014153) #14	COL17A1 (ENSMMNG00015013979) #15	SLK (ENSMMNG00015013837) #16	STN1 (ENSMMNG00015013736) #17	SH3PXD2A (ENSMMNG00015013681) #18	NEURL1 (ENSMMNG00015013659) #19	CALHM3 (ENSMMNG00015013638) #20	CALHM1 (ENSMMNG00015013618) #21	CALHM2 (ENSMMNG00015013608) #22	PDCD11 (ENSMMNG00015013562) #23	ATP5MK (ENSMMNG00015013543) #24	TAF5 (ENSMMNG00015013528) #25	PCGF6 (ENSMMNG00015013501) #26	INA (ENSMMNG00015013479) #27	ENSMMNG00015013465	CNNM2 (ENSMMNG00015013452) #30	AS3MT (ENSMMNG00015013420) #31	BORCS7 (ENSMMNG00015013396) #32	ENSMMNG00015013382	CYP17A1 (ENSMMNG00015013335) #33	ENSMMNG00015013292 #34	SFXN2 (ENSMMNG00015013273) #35	ARL3 (ENSMMNG00015013259) #36
Beluga whale	MODERN SPECIES	65	ENSDLEG00000012486	ENSDLEG00000012496	SORCS3 (ENSDLEG00000012501) #8	CFAP58 (ENSDLEG00000012529) #9	ITPRIP (ENSDLEG00000012555) #10	GSTO2 (ENSDLEG00000012561) #11	GSTO1 (ENSDLEG00000012569) #12	CFAP43 (ENSDLEG00000012588) #13	SFR1 (ENSDLEG00000012724) #14	COL17A1 (ENSDLEG00000012764) #15	SLK (ENSDLEG00000013132) #16	STN1 (ENSDLEG00000013196) #17	SH3PXD2A (ENSDLEG00000008838) #18	NEURL1 (ENSDLEG00000008927) #19	CALHM3 (ENSDLEG00000008972) #20	CALHM1 (ENSDLEG00000009015) #21	CALHM2 (ENSDLEG00000009041) #22	PDCD11 (ENSDLEG00000009147) #23	USMG5 (ENSDLEG00000009255) #24	TAF5 (ENSDLEG00000009272) #25	PCGF6 (ENSDLEG00000009308) #26	INA (ENSDLEG00000009353) #27	NT5C2 (ENSDLEG00000009371)	CNNM2 (ENSDLEG00000009405) #30	AS3MT (ENSDLEG00000009479) #31	BORCS7 (ENSDLEG00000009520) #32	CYP17A1 (ENSDLEG00000009531) #33	SFXN2 (ENSDLEG00000009564) #35	ARL3 (ENSDLEG00000009629) #36	TRIM8 (ENSDLEG00000009697) #37	SUFU (ENSDLEG00000009757)
Vaquita	MODERN SPECIES	7	SORCS1 (ENSPSNG00000010862) #7	ENSPSNG00000020840	SORCS3 (ENSPSNG00000020579) #8	CFAP58 (ENSPSNG00000020428) #9	ITPRIP (ENSPSNG00000020395) #10	GSTO2 (ENSPSNG00000020348) #11	GSTO1 (ENSPSNG00000020286) #12	CFAP43 (ENSPSNG00000019933) #13	SFR1 (ENSPSNG00000019848) #14	COL17A1 (ENSPSNG00000019777) #15	SLK (ENSPSNG00000019646) #16	STN1 (ENSPSNG00000019572) #17	SH3PXD2A (ENSPSNG00000019335) #18	NEURL1 (ENSPSNG00000019212) #19	CALHM3 (ENSPSNG00000019156) #20	CALHM1 (ENSPSNG00000019125) #21	CALHM2 (ENSPSNG00000019092) #22	PDCD11 (ENSPSNG00000019025) #23	ENSPSNG00000018977 #24	TAF5 (ENSPSNG00000018939) #25	PCGF6 (ENSPSNG00000018827) #26	INA (ENSPSNG00000018790) #27	NT5C2 (ENSPSNG00000018760) #29	CNNM2 (ENSPSNG00000018654) #30	AS3MT (ENSPSNG00000018610) #31	BORCS7 (ENSPSNG00000018573) #32	ENSPSNG00000018533	CYP17A1 (ENSPSNG00000018242) #33	ENSPSNG00000018106 #34	SFXN2 (ENSPSNG00000018035) #35	ARL3 (ENSPSNG00000017986) #36
Dolphin	MODERN SPECIES	985												STN1 (ENSTTRG00000003375) #17	SH3PXD2A (ENSTTRG00000003374) #18	NEURL1 (ENSTTRG00000003372) #19	CALHM3 (ENSTTRG00000003370) #20	CALHM1 (ENSTTRG00000003368) #21	CALHM2 (ENSTTRG00000003364) #22	PDCD11 (ENSTTRG00000003356) #23	USMG5 (ENSTTRG00000003352) #24	TAF5 (ENSTTRG00000003344) #25	PCGF6 (ENSTTRG00000003333) #26	INA (ENSTTRG00000003328) #27
Blue whale	MODERN SPECIES	7	SORCS1 (ENSBMSG00010021248) #7	ENSBMSG00010021559	ENSBMSG00010021564	SORCS3 (ENSBMSG00010021581) #8	CFAP58 (ENSBMSG00010021615) #9	ITPRIP (ENSBMSG00010021622) #10	GSTO2 (ENSBMSG00010021631) #11	GSTO1 (ENSBMSG00010021655) #12	CFAP43 (ENSBMSG00010021676) #13	SFR1 (ENSBMSG00010021686) #14	ENSBMSG00010021698	SLK (ENSBMSG00010021709) #16	STN1 (ENSBMSG00010021725) #17	SH3PXD2A (ENSBMSG00010021733) #18	NEURL1 (ENSBMSG00010021740) #19	CALHM1 (ENSBMSG00010021743) #21	CALHM2 (ENSBMSG00010013933) #22	PDCD11 (ENSBMSG00010013983) #23	ENSBMSG00010014054 #24	TAF5 (ENSBMSG00010014107) #25	PCGF6 (ENSBMSG00010014174) #26	INA (ENSBMSG00010014285) #27	NT5C2 (ENSBMSG00010014532) #29	CNNM2 (ENSBMSG00010014766) #30	AS3MT (ENSBMSG00010014924) #31	BORCS7 (ENSBMSG00010015015) #32	CYP17A1 (ENSBMSG00010015084) #33	ENSBMSG00010015401 #34	SFXN2 (ENSBMSG00010015478) #35	ARL3 (ENSBMSG00010015549) #36	TRIM8 (ENSBMSG00010015579) #37
Pecora	ANCESTRAL SPECIES	12	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Percora_a	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT00950000183109.c.a.a.p #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Bovidae	ANCESTRAL SPECIES	24	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Caprinae	ANCESTRAL SPECIES	19	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s.a #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.g.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.p #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Rambouillet Sheep	MODERN SPECIES	14	SORCS3 (ENSOARG00020011044) #8	CFAP58 (ENSOARG00020010711) #9	ITPRIP (ENSOARG00020010665) #10	GSTO2 (ENSOARG00020010406) #11	ENSOARG00020010357 #12	ENSOARG00020010304 #12	CFAP43 (ENSOARG00020009695) #13	SFR1 (ENSOARG00020009619) #14	COL17A1 (ENSOARG00020009409) #15	SLK (ENSOARG00020009006) #16	STN1 (ENSOARG00020008923) #17	ENSOARG00020008903	SH3PXD2A (ENSOARG00020008650) #18	NEURL1 (ENSOARG00020008586) #19	CALHM3 (ENSOARG00020008557) #20	CALHM1 (ENSOARG00020008535) #21	CALHM2 (ENSOARG00020008493) #22	PDCD11 (ENSOARG00020008240) #23	ATP5MD (ENSOARG00020008172) #24	TAF5 (ENSOARG00020008039) #25	PCGF6 (ENSOARG00020007889) #26	INA (ENSOARG00020007851) #27	NT5C2 (ENSOARG00020007751) #29	CNNM2 (ENSOARG00020007642) #30	AS3MT (ENSOARG00020007602) #31	BORCS7 (ENSOARG00020007581) #32	CYP17A1 (ENSOARG00020007273) #33	ENSOARG00020007149 #33	ENSOARG00020007122	WBP1L (ENSOARG00020007033) #34	SFXN2 (ENSOARG00020006982) #35
Goat	MODERN SPECIES	18	ENSCHIG00000020054	SORCS3 (ENSCHIG00000004540) #8	CFAP58 (ENSCHIG00000016727) #9	ITPRIP (ENSCHIG00000020814) #10	GSTO2 (ENSCHIG00000003139) #11	ENSCHIG00000010963 #12	CFAP43 (ENSCHIG00000019392) #13	ENSCHIG00000019373 #12	SFR1 (ENSCHIG00000020297) #14	COL17A1 (ENSCHIG00000013715) #15	SLK (ENSCHIG00000017273) #16	ENSCHIG00000019425 #17	SH3PXD2A (ENSCHIG00000012501) #18	NEURL1 (ENSCHIG00000021908) #19	CALHM3 (ENSCHIG00000019527) #20	CALHM1 (ENSCHIG00000000587) #21	CALHM2 (ENSCHIG00000014672) #22	PDCD11 (ENSCHIG00000025218) #23	ENSCHIG00000003414 #24	TAF5 (ENSCHIG00000011203) #25	PCGF6 (ENSCHIG00000011396) #26	INA (ENSCHIG00000021339) #27	NT5C2 (ENSCHIG00000016169) #29	CNNM2 (ENSCHIG00000016492) #30	AS3MT (ENSCHIG00000013994) #31	BORCS7 (ENSCHIG00000000549) #32	CYP17A1A (ENSCHIG00000015158) #33	CYP17A1B (ENSCHIG00000005308) #33	WBP1L (ENSCHIG00000016756) #34	SFXN2 (ENSCHIG00000005366) #35	ARL3 (ENSCHIG00000012000) #36
Bovinae	ANCESTRAL SPECIES	22	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Bos	ANCESTRAL SPECIES	23	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34
Bos_b	ANCESTRAL SPECIES	23	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.a.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.b.b.a.a.a.a.a
Cow	MODERN SPECIES	18	SORCS3 (ENSBTAG00000004612) #8	CFAP58 (ENSBTAG00000007243) #9	ITPRIP (ENSBTAG00000003990) #10	GSTO2 (ENSBTAG00000040290) #11	GSTO1 (ENSBTAG00000003989) #12	ENSBTAG00000038540 #12	CFAP43 (ENSBTAG00000014574) #13	SFR1 (ENSBTAG00000047450) #14	COL17A1 (ENSBTAG00000002430) #15	SLK (ENSBTAG00000001017) #16	STN1 (ENSBTAG00000015019) #17	ENSBTAG00000048488 #18	SH3PXD2A (ENSBTAG00000044153) #18	NEURL1 (ENSBTAG00000003741) #19	CALHM3 (ENSBTAG00000032761) #20	CALHM1 (ENSBTAG00000007044) #21	CALHM2 (ENSBTAG00000009719) #22	PDCD11 (ENSBTAG00000009715) #23	ATP5MK (ENSBTAG00000009713) #24	TAF5 (ENSBTAG00000009709) #25	PCGF6 (ENSBTAG00000009879) #26	INA (ENSBTAG00000002717) #27	NT5C2 (ENSBTAG00000012858) #29	CNNM2 (ENSBTAG00000012857) #30	ENSBTAG00000054629	ENSBTAG00000053360	AS3MT (ENSBTAG00000036127) #31	ENSBTAG00000053826 #32	CYP17A1 (ENSBTAG00000014335) #33	ENSBTAG00000054516 #33	CYP17A1 (ENSBTAG00000049558) #33
Hybrid Bos Indicus	MODERN SPECIES	18	XPNPEP1 (ENSBIXG00005015192)	SORCS1 (ENSBIXG00005005587) #7	SORCS3 (ENSBIXG00005014866) #8	CFAP58 (ENSBIXG00005014662) #9	ITPRIP (ENSBIXG00005002045) #10	GSTO2 (ENSBIXG00005014610) #11	GSTO1 (ENSBIXG00005002028) #12	CFAP43 (ENSBIXG00005006740) #13	SFR1 (ENSBIXG00005014485) #14	COL17A1 (ENSBIXG00005014449) #15	SLK (ENSBIXG00005014357) #16	STN1 (ENSBIXG00005014161) #17	SH3PXD2A (ENSBIXG00005007453) #18	NEURL1 (ENSBIXG00005007451) #19	CALHM3 (ENSBIXG00005013942) #20	CALHM1 (ENSBIXG00005013926) #21	CALHM2 (ENSBIXG00005013905) #22	PDCD11 (ENSBIXG00005013880) #23	ENSBIXG00005005925 #24	TAF5 (ENSBIXG00005013813) #25	PCGF6 (ENSBIXG00005013781) #26	INA (ENSBIXG00005013717) #27	NT5C2 (ENSBIXG00005013678) #29	ENSBIXG00005013582	CNNM2 (ENSBIXG00005013565) #30	ENSBIXG00005013480	AS3MT (ENSBIXG00005013473) #31	BORCS7 (ENSBIXG00005013454) #32	ENSBIXG00005013433	ENSBIXG00005013421 #33	ENSBIXG00005013390 #33
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34
Domestic yak	MODERN SPECIES	17	SORCS3 (ENSBGRG00000013420) #8	CFAP58 (ENSBGRG00000013270) #9	ITPRIP (ENSBGRG00000013250) #10	GSTO2 (ENSBGRG00000013033) #11	ENSBGRG00000012997	GSTO1 (ENSBGRG00000012710) #12	ENSBGRG00000012602 #13	ENSBGRG00000012536 #13	SFR1 (ENSBGRG00000012483) #14	COL17A1 (ENSBGRG00000010903) #15	SLK (ENSBGRG00000010186) #16	STN1 (ENSBGRG00000010099) #17	SH3PXD2A (ENSBGRG00000009950) #18	NEURL1 (ENSBGRG00000009848) #19	CALHM3 (ENSBGRG00000009815) #20	CALHM1 (ENSBGRG00000009787) #21	CALHM2 (ENSBGRG00000009752) #22	PDCD11 (ENSBGRG00000009626) #23	ENSBGRG00000009559 #24	ENSBGRG00000009527 #24	TAF5 (ENSBGRG00000009421) #25	PCGF6 (ENSBGRG00000009240) #26	INA (ENSBGRG00000009201) #27	ENSBGRG00000009166	NT5C2 (ENSBGRG00000008985) #29	CNNM2 (ENSBGRG00000008807) #30	AS3MT (ENSBGRG00000008703) #31	BORCS7 (ENSBGRG00000008664) #32	ENSBGRG00000008565 #33	ENSBGRG00000008360 #33	ENSBGRG00000007921 #33
Wild yak	MODERN SPECIES	124												STN1 (ENSBMUG00000000696) #17	SH3PXD2A (ENSBMUG00000000732) #18	NEURL1 (ENSBMUG00000000765) #19	CALHM3 (ENSBMUG00000000783) #20	CALHM1 (ENSBMUG00000000792) #21	CALHM2 (ENSBMUG00000000810) #22	PDCD11 (ENSBMUG00000000897) #23	ENSBMUG00000000948 #24	TAF5 (ENSBMUG00000000970) #25	PCGF6 (ENSBMUG00000000995) #26	INA (ENSBMUG00000001016) #27	NT5C2 (ENSBMUG00000001069) #29	ENSBMUG00000001099	CNNM2 (ENSBMUG00000001127) #30	AS3MT (ENSBMUG00000001150) #31	BORCS7 (ENSBMUG00000001161) #32	ENSBMUG00000001210 #33	ENSBMUG00000001320 #33	WBP1L (ENSBMUG00000001345) #34	SFXN2 (ENSBMUG00000001395) #35
American bison	MODERN SPECIES	3316	SORCS1 (ENSBBBG00000023913) #7	SORCS3 (ENSBBBG00000023649) #8	CFAP58 (ENSBBBG00000006154) #9	ITPRIP (ENSBBBG00000023524) #10	GSTO2 (ENSBBBG00000023515) #11	ENSBBBG00000008631 #12	ENSBBBG00000023450 #12	CFAP43 (ENSBBBG00000023436) #13	SFR1 (ENSBBBG00000023370) #14	COL17A1 (ENSBBBG00000006107) #15	SLK (ENSBBBG00000006071) #16	STN1 (ENSBBBG00000023099) #17	SH3PXD2A (ENSBBBG00000022954) #18	NEURL1 (ENSBBBG00000022879) #19	CALHM3 (ENSBBBG00000022873) #20	CALHM1 (ENSBBBG00000022866) #21	CALHM2 (ENSBBBG00000022855) #22	PDCD11 (ENSBBBG00000022849) #23	ENSBBBG00000022765 #24	TAF5 (ENSBBBG00000005985) #25	PCGF6 (ENSBBBG00000022739) #26	INA (ENSBBBG00000022709) #27	NT5C2 (ENSBBBG00000022699) #29	ENSBBBG00000022663	CNNM2 (ENSBBBG00000005962) #30	AS3MT (ENSBBBG00000022602) #31	BORCS7 (ENSBBBG00000022589) #32	CYP17A1 (ENSBBBG00000022580) #33	WBP1L (ENSBBBG00000022572) #34	SFXN2 (ENSBBBG00000022549) #35	ARL3 (ENSBBBG00000022525) #36
Siberian musk deer	MODERN SPECIES	1162	XPNPEP1 (ENSMMSG00000021829)	SORCS1 (ENSMMSG00000021947) #7	SORCS3 (ENSMMSG00000022440) #8	CFAP58 (ENSMMSG00000022547) #9	ITPRIP (ENSMMSG00000022580) #10	GSTO2 (ENSMMSG00000022589) #11	GSTO1 (ENSMMSG00000022646) #12	CFAP43 (ENSMMSG00000022726) #13	SFR1 (ENSMMSG00000022773) #14	COL17A1 (ENSMMSG00000022824) #15	SLK (ENSMMSG00000023006) #16	STN1 (ENSMMSG00000023042) #17	SH3PXD2A (ENSMMSG00000023055) #18	NEURL1 (ENSMMSG00000023079) #19	CALHM3 (ENSMMSG00000023099) #20	CALHM1 (ENSMMSG00000023103) #21	CALHM2 (ENSMMSG00000023108) #22	PDCD11 (ENSMMSG00000023119) #23	ENSMMSG00000023134 #24	TAF5 (ENSMMSG00000023138) #25	ENSMMSG00000023151 #26	INA (ENSMMSG00000023173) #27	ENSMMSG00000023189	ENSMMSG00000023210	CNNM2 (ENSMMSG00000023218) #30	ENSMMSG00000023266 #31	BORCS7 (ENSMMSG00000023301) #32	CYP17A1 (ENSMMSG00000023330) #33	WBP1L (ENSMMSG00000023437) #34	SFXN2 (ENSMMSG00000023456) #35	ARL3 (ENSMMSG00000023474) #36
Yarkand deer	MODERN SPECIES	6	ENSCHYG00000007117	SORCS3 (ENSCHYG00000006900) #8	CFAP58 (ENSCHYG00000006776) #9	ITPRIP (ENSCHYG00000006759) #10	ENSCHYG00000006740	GSTO2 (ENSCHYG00000006622) #11	GSTO1 (ENSCHYG00000006501) #12	CFAP43 (ENSCHYG00000006430) #13	SFR1 (ENSCHYG00000006389) #14	COL17A1 (ENSCHYG00000005902) #15	SLK (ENSCHYG00000005694) #16	STN1 (ENSCHYG00000005613) #17	SH3PXD2A (ENSCHYG00000005529) #18	NEURL1 (ENSCHYG00000005486) #19	CALHM3 (ENSCHYG00000005447) #20	CALHM1 (ENSCHYG00000005428) #21	CALHM2 (ENSCHYG00000005405) #22	PDCD11 (ENSCHYG00000005348) #23	ENSCHYG00000005295 #24	TAF5 (ENSCHYG00000005235) #25	PCGF6 (ENSCHYG00000005140) #26	ENSCHYG00000016674	INA (ENSCHYG00000016625) #27	NT5C2 (ENSCHYG00000016134) #29	CNNM2 (ENSCHYG00000015538) #30	AS3MT (ENSCHYG00000015224) #31	BORCS7 (ENSCHYG00000015118) #32	ENSCHYG00000015093	WBP1L (ENSCHYG00000014950) #34	SFXN2 (ENSCHYG00000014532) #35	ARL3 (ENSCHYG00000014398) #36
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
American black bear	MODERN SPECIES	2564													SH3PXD2A (ENSUAMG00000018116) #18	NEURL1 (ENSUAMG00000018115) #19	CALHM3 (ENSUAMG00000018114) #20	CALHM1 (ENSUAMG00000018113) #21	CALHM2 (ENSUAMG00000018112) #22	PDCD11 (ENSUAMG00000018015) #23	ATP5MK (ENSUAMG00000018005) #24
Polar bear	MODERN SPECIES	92	XPNPEP1 (ENSUMAG00000023709)	SORCS1 (ENSUMAG00000023682) #7	SORCS3 (ENSUMAG00000023676) #8	ENSUMAG00000023674	CFAP58 (ENSUMAG00000023672) #9	ITPRIP (ENSUMAG00000023671) #10	GSTO2 (ENSUMAG00000023665) #11	GSTO1 (ENSUMAG00000023662) #12	CFAP43 (ENSUMAG00000023657) #13	SFR1 (ENSUMAG00000023655) #14	ENSUMAG00000023654	SLK (ENSUMAG00000023651) #16	STN1 (ENSUMAG00000023647) #17	SH3PXD2A (ENSUMAG00000023643) #18	CALHM3 (ENSUMAG00000023638) #20	CALHM1 (ENSUMAG00000023637) #21	CALHM2 (ENSUMAG00000023635) #22	PDCD11 (ENSUMAG00000023567) #23	ATP5MK (ENSUMAG00000023547) #24	TAF5 (ENSUMAG00000023531) #25	ENSUMAG00000023524 #26	ENSUMAG00000023523	ENSUMAG00000023521 #27	ENSUMAG00000023519	CNNM2 (ENSUMAG00000023515) #30	AS3MT (ENSUMAG00000023512) #31	BORCS7 (ENSUMAG00000023510) #32	CYP17A1 (ENSUMAG00000023508) #33	WBP1L (ENSUMAG00000023506) #34	SFXN2 (ENSUMAG00000023501) #35	ARL3 (ENSUMAG00000023500) #36
Giant Panda	MODERN SPECIES	16	SORCS1 (ENSAMEG00000008455) #7	ENSAMEG00000028476	ENSAMEG00000018052 #8	CFAP58 (ENSAMEG00000018045) #9	ITPRIP (ENSAMEG00000020225) #10	ENSAMEG00000018041 #11	GSTO1 (ENSAMEG00000018030) #12	CFAP43 (ENSAMEG00000018011) #13	SFR1 (ENSAMEG00000018007) #14	ENSAMEG00000017991	SLK (ENSAMEG00000017981) #16	STN1 (ENSAMEG00000017971) #17	SH3PXD2A (ENSAMEG00000017966) #18	NEURL1 (ENSAMEG00000017960) #19	CALHM3 (ENSAMEG00000017958) #20	CALHM1 (ENSAMEG00000017956) #21	CALHM2 (ENSAMEG00000030260) #22	PDCD11 (ENSAMEG00000017935) #23	ATP5MK (ENSAMEG00000017934) #24	TAF5 (ENSAMEG00000017926) #25	PCGF6 (ENSAMEG00000017916) #26	INA (ENSAMEG00000023491) #27	NT5C2 (ENSAMEG00000017886) #29	CNNM2 (ENSAMEG00000017864) #30	BORCS7 (ENSAMEG00000017863) #32	CYP17A1 (ENSAMEG00000017838) #33	WBP1L (ENSAMEG00000030900) #34	SFXN2 (ENSAMEG00000017821) #35	ENSAMEG00000017816 #36	TRIM8 (ENSAMEG00000017812) #37	SUFU (ENSAMEG00000017809)
Mustelinae	ANCESTRAL SPECIES	29			ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
American mink	MODERN SPECIES	25		ENSNVIG00000015792	SORCS3 (ENSNVIG00000015831) #8	CFAP58 (ENSNVIG00000015885) #9	ITPRIP (ENSNVIG00000015925) #10	GSTO2 (ENSNVIG00000015938) #11	ENSNVIG00000015962 #12	CFAP43 (ENSNVIG00000016002) #13	SFR1 (ENSNVIG00000016083) #14	F5H0Q7 (ENSNVIG00000016116) #15	SLK (ENSNVIG00000016502) #16	STN1 (ENSNVIG00000016545) #17	SH3PXD2A (ENSNVIG00000016596) #18	NEURL1 (ENSNVIG00000016689) #19	CALHM3 (ENSNVIG00000016714) #20	CALHM1 (ENSNVIG00000016736) #21	CALHM2 (ENSNVIG00000016743) #22	PDCD11 (ENSNVIG00000016762) #23	ENSNVIG00000016873 #24	TAF5 (ENSNVIG00000016891) #25	PCGF6 (ENSNVIG00000016935) #26	INA (ENSNVIG00000016984) #27	NT5C2 (ENSNVIG00000016994) #29	CNNM2 (ENSNVIG00000017046) #30	ENSNVIG00000017111	BORCS7 (ENSNVIG00000017120) #32	CYP17A1 (ENSNVIG00000017144) #33	WBP1L (ENSNVIG00000017241) #34	SFXN2 (ENSNVIG00000017262) #35	ARL3 (ENSNVIG00000017289) #36	TRIM8 (ENSNVIG00000017306) #37
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.e #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369.a #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00550000074855.u.a.a.b	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.e #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000160286.m	ENSGT00940000162369.a #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Dingo	MODERN SPECIES	165	SORCS1 (ENSCAFG00020011662) #7	ENSCAFG00020011608	SORCS3 (ENSCAFG00020011503) #8	CFAP58 (ENSCAFG00020011436) #9	GSTO2 (ENSCAFG00020011420) #11	GSTO1 (ENSCAFG00020011416) #12	ENSCAFG00020011414 #13	SFR1 (ENSCAFG00020011405) #14	COL17A1 (ENSCAFG00020011291) #15	SLK (ENSCAFG00020010676) #16	ENSCAFG00020010654	STN1 (ENSCAFG00020010650) #17	SH3PXD2A (ENSCAFG00020010641) #18	NEURL1 (ENSCAFG00020010626) #19	CALHM3 (ENSCAFG00020010618) #20	CALHM1 (ENSCAFG00020010614) #21	CALHM2 (ENSCAFG00020010612) #22	PDCD11 (ENSCAFG00020010369) #23	ENSCAFG00020010350 #24	TAF5 (ENSCAFG00020010331) #25	ENSCAFG00020010327	ENSCAFG00020010324 #26	INA (ENSCAFG00020010321) #27	ENSCAFG00020010320	NT5C2 (ENSCAFG00020010290) #29	CNNM2 (ENSCAFG00020010267) #30	AS3MT (ENSCAFG00020010265) #31	BORCS7 (ENSCAFG00020010264) #32	CYP17A1 (ENSCAFG00020010261) #33	WBP1L (ENSCAFG00020010258) #34	SFXN2 (ENSCAFG00020010254) #35
Dog	MODERN SPECIES	20	SORCS1 (ENSCAFG00845026791) #7	ENSCAFG00845026526	SORCS3 (ENSCAFG00845024509) #8	ENSCAFG00845023921 #9	GSTO2 (ENSCAFG00845023661) #11	GSTO1 (ENSCAFG00845029348) #12	CFAP43 (ENSCAFG00845029264) #13	SFR1 (ENSCAFG00845029223) #14	COL17A1 (ENSCAFG00845028642) #15	SLK (ENSCAFG00845028335) #16	ENSCAFG00845028290	STN1 (ENSCAFG00845028219) #17	STN1 (ENSCAFG00845027985) #18	NEURL1 (ENSCAFG00845027843) #19	CALHM3 (ENSCAFG00845027790) #20	CALHM1 (ENSCAFG00845027760) #21	PDCD11 (ENSCAFG00845027415) #23	ATP5MD (ENSCAFG00845027273) #24	TAF5 (ENSCAFG00845027221) #25	ENSCAFG00845027176	PCGF6 (ENSCAFG00845026968) #26	INA (ENSCAFG00845026857) #27	ENSCAFG00845026826	NT5C2 (ENSCAFG00845026627) #29	CNNM2 (ENSCAFG00845025992) #30	CYP17A1 (ENSCAFG00845025701) #33	WBP1L (ENSCAFG00845025533) #34	SFXN2 (ENSCAFG00845025402) #35	ARL3 (ENSCAFG00845025280) #36	TRIM8 (ENSCAFG00845025148) #37	SUFU (ENSCAFG00845025024)
Red fox	MODERN SPECIES		SORCS1 (ENSVVUG00000005689) #7	SORCS3 (ENSVVUG00000004978) #8	CFAP58 (ENSVVUG00000004840) #9	ITPRIP (ENSVVUG00000004832) #10	GSTO2 (ENSVVUG00000004830) #11	GSTO1 (ENSVVUG00000004800) #12	ENSVVUG00000004792	CFAP43 (ENSVVUG00000004764) #13	SFR1 (ENSVVUG00000004758) #14	COL17A1 (ENSVVUG00000004707) #15	SLK (ENSVVUG00000004650) #16	ENSVVUG00000004636 #17	SH3PXD2A (ENSVVUG00000004587) #18	NEURL1 (ENSVVUG00000004550) #19	CALHM3 (ENSVVUG00000004548) #20	CALHM1 (ENSVVUG00000004508) #21	CALHM2 (ENSVVUG00000004502) #22	PDCD11 (ENSVVUG00000004457) #23	ATP5MD (ENSVVUG00000004442) #24	TAF5 (ENSVVUG00000004406) #25	PCGF6 (ENSVVUG00000004391) #26	INA (ENSVVUG00000004387) #27	ENSVVUG00000004383	NT5C2 (ENSVVUG00000004366) #29	CNNM2 (ENSVVUG00000004323) #30	AS3MT (ENSVVUG00000004307) #31	BORCS7 (ENSVVUG00000004302) #32	CYP17A1 (ENSVVUG00000004262) #33	WBP1L (ENSVVUG00000004241) #34	SFXN2 (ENSVVUG00000004226) #35	ARL3 (ENSVVUG00000004222) #36
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00980000200805	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Tiger	MODERN SPECIES	136															CALHM3 (ENSPTIG00000012273) #20	CALHM1 (ENSPTIG00000012221) #21	CALHM2 (ENSPTIG00000011982) #22	PDCD11 (ENSPTIG00000011433) #23	ENSPTIG00000010699 #24	TAF5 (ENSPTIG00000010430) #25	ENSPTIG00000010232 #26	INA (ENSPTIG00000009953) #27	ENSPTIG00000009780	NT5C2 (ENSPTIG00000008167) #29	CNNM2 (ENSPTIG00000007177) #30	AS3MT (ENSPTIG00000005929) #31	BORCS7 (ENSPTIG00000005646) #32	CYP17A1 (ENSPTIG00000004247) #33	WBP1L (ENSPTIG00000002920) #34	SFXN2 (ENSPTIG00000000655) #35	ARL3 (ENSPTIG00000021020) #36
Panthera_a	ANCESTRAL SPECIES	9	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT01000000222030	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
leopard	MODERN SPECIES	33	XPNPEP1 (ENSPPRG00000003242)	SORCS1 (ENSPPRG00000009700) #7	SORCS3 (ENSPPRG00000013772) #8	CFAP58 (ENSPPRG00000014331) #9	GSTO2 (ENSPPRG00000018048) #11	GSTO1 (ENSPPRG00000022553) #12	ENSPPRG00000024492	CFAP43 (ENSPPRG00000023238) #13	SFR1 (ENSPPRG00000000336) #14	COL17A1 (ENSPPRG00000009059) #15	SLK (ENSPPRG00000009662) #16	STN1 (ENSPPRG00000010476) #17	SH3PXD2A (ENSPPRG00000011103) #18	NEURL1 (ENSPPRG00000011450) #19	CALHM3 (ENSPPRG00000011663) #20	CALHM1 (ENSPPRG00000011899) #21	CALHM2 (ENSPPRG00000012922) #22	PDCD11 (ENSPPRG00000015133) #23	ENSPPRG00000017518 #24	TAF5 (ENSPPRG00000019671) #25	PCGF6 (ENSPPRG00000021382) #26	INA (ENSPPRG00000000231) #27	ENSPPRG00000000418	ENSPPRG00000002375	NT5C2 (ENSPPRG00000002954) #29	CNNM2 (ENSPPRG00000003743) #30	AS3MT (ENSPPRG00000004722) #31	BORCS7 (ENSPPRG00000005710) #32	CYP17A1 (ENSPPRG00000006800) #33	WBP1L (ENSPPRG00000007200) #34	SFXN2 (ENSPPRG00000007450) #35
lion	MODERN SPECIES	11	SORCS1 (ENSPLOG00000011185) #7	SORCS3 (ENSPLOG00000011869) #8	CFAP58 (ENSPLOG00000012343) #9	ITPRIP (ENSPLOG00000012530) #10	GSTO2 (ENSPLOG00000012574) #11	GSTO1 (ENSPLOG00000012757) #12	ENSPLOG00000012892	CFAP43 (ENSPLOG00000012959) #13	ENSPLOG00000013422 #14	COL17A1 (ENSPLOG00000013594) #15	SLK (ENSPLOG00000014691) #16	STN1 (ENSPLOG00000014905) #17	SH3PXD2A (ENSPLOG00000014989) #18	NEURL1 (ENSPLOG00000015278) #19	CALHM3 (ENSPLOG00000015347) #20	CALHM1 (ENSPLOG00000015393) #21	CALHM2 (ENSPLOG00000015425) #22	PDCD11 (ENSPLOG00000015561) #23	ENSPLOG00000016095 #24	TAF5 (ENSPLOG00000016129) #25	PCGF6 (ENSPLOG00000016170) #26	INA (ENSPLOG00000016317) #27	NT5C2 (ENSPLOG00000016374) #29	CNNM2 (ENSPLOG00000016463) #30	AS3MT (ENSPLOG00000016616) #31	BORCS7 (ENSPLOG00000016773) #32	CYP17A1 (ENSPLOG00000016900) #33	WBP1L (ENSPLOG00000017200) #34	SFXN2 (ENSPLOG00000017272) #35	ARL3 (ENSPLOG00000017326) #36	ENSPLOG00000017352
Cat	MODERN SPECIES	242	SORCS1 (ENSFCAG00000004160) #7	SORCS3 (ENSFCAG00000007482) #8	CFAP58 (ENSFCAG00000006024) #9	ITPRIP (ENSFCAG00000006023) #10	GSTO2 (ENSFCAG00000006022) #11	GSTO1 (ENSFCAG00000025597) #12	ENSFCAG00000041951	CFAP43 (ENSFCAG00000011533) #13	SFR1 (ENSFCAG00000028988) #14	COL17A1 (ENSFCAG00000004299) #15	SLK (ENSFCAG00000004298) #16	STN1 (ENSFCAG00000030378) #17	SH3PXD2A (ENSFCAG00000002390) #18	NEURL1 (ENSFCAG00000026091) #19	CALHM3 (ENSFCAG00000002388) #20	CALHM1 (ENSFCAG00000002387) #21	CALHM2 (ENSFCAG00000002386) #22	PDCD11 (ENSFCAG00000002384) #23	ENSFCAG00000002383 #24	TAF5 (ENSFCAG00000002382) #25	PCGF6 (ENSFCAG00000026427) #26	INA (ENSFCAG00000025885) #27	ENSFCAG00000037878	NT5C2 (ENSFCAG00000013705) #29	CNNM2 (ENSFCAG00000022183) #30	AS3MT (ENSFCAG00000030999) #31	ENSFCAG00000041677	CYP17A1 (ENSFCAG00000001254) #33	WBP1L (ENSFCAG00000042551) #34	ARL3 (ENSFCAG00000001251) #36	TRIM8 (ENSFCAG00000028572) #37
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Microbat	MODERN SPECIES	1099		SORCS3 (ENSMLUG00000006688) #8	CFAP58 (ENSMLUG00000012414) #9	ITPRIP (ENSMLUG00000013395) #10	GSTO2 (ENSMLUG00000025624) #11	GSTO1 (ENSMLUG00000013385) #12	ENSMLUG00000013359 #13	ENSMLUG00000023358 #13	SFR1 (ENSMLUG00000013352) #14	COL17A1 (ENSMLUG00000013328) #15	SLK (ENSMLUG00000013319) #16	STN1 (ENSMLUG00000002037) #17	SH3PXD2A (ENSMLUG00000013186) #18	NEURL1 (ENSMLUG00000013182) #19	CALHM3 (ENSMLUG00000013177) #20	CALHM1 (ENSMLUG00000005022) #21	PDCD11 (ENSMLUG00000004997) #23	TAF5 (ENSMLUG00000022791) #25	PCGF6 (ENSMLUG00000004985) #26	INA (ENSMLUG00000004978) #27	ENSMLUG00000004962	ENSMLUG00000030173	CNNM2 (ENSMLUG00000023959) #30	BORCS7 (ENSMLUG00000024332) #32	CYP17A1 (ENSMLUG00000004363) #33	ENSMLUG00000012620 #34	SFXN2 (ENSMLUG00000012611) #35	ARL3 (ENSMLUG00000012603) #36	TRIM8 (ENSMLUG00000012594) #37	SUFU (ENSMLUG00000012590)	ACTR1A (ENSMLUG00000006356)
Greater horseshoe bat	MODERN SPECIES	7	ENSRFEG00010012848	SORCS1 (ENSRFEG00010012933) #7	SORCS3 (ENSRFEG00010014389) #8	CFAP58 (ENSRFEG00010014856) #9	ITPRIP (ENSRFEG00010015219) #10	GSTO2 (ENSRFEG00010015255) #11	GSTO1 (ENSRFEG00010015386) #12	CFAP43 (ENSRFEG00010015507) #13	SFR1 (ENSRFEG00010015584) #14	COL17A1 (ENSRFEG00010015674) #15	SLK (ENSRFEG00010015762) #16	STN1 (ENSRFEG00010015891) #17	SH3PXD2A (ENSRFEG00010015976) #18	NEURL1 (ENSRFEG00010016052) #19	CALHM3 (ENSRFEG00010016094) #20	CALHM1 (ENSRFEG00010016159) #21	CALHM2 (ENSRFEG00010016197) #22	PDCD11 (ENSRFEG00010016231) #23	ENSRFEG00010016305 #24	TAF5 (ENSRFEG00010016357) #25	PCGF6 (ENSRFEG00010016536) #26	ENSRFEG00010016624	INA (ENSRFEG00010016674) #27	ENSRFEG00010016714	NT5C2 (ENSRFEG00010016737) #29	CNNM2 (ENSRFEG00010016866) #30	BORCS7 (ENSRFEG00010016916) #32	CYP17A1 (ENSRFEG00010016955) #33	ENSRFEG00010017152	WBP1L (ENSRFEG00010017206) #34	SFXN2 (ENSRFEG00010017301) #35
Megabat	MODERN SPECIES	1281				CFAP58 (ENSPVAG00000004213) #9	ITPRIP (ENSPVAG00000004212) #10	GSTO2 (ENSPVAG00000004210) #11	GSTO1 (ENSPVAG00000004209) #12	CFAP43 (ENSPVAG00000004205) #13	SFR1 (ENSPVAG00000004202) #14	COL17A1 (ENSPVAG00000004189) #15	SLK (ENSPVAG00000004188) #16	STN1 (ENSPVAG00000004187) #17	SH3PXD2A (ENSPVAG00000004186) #18	NEURL1 (ENSPVAG00000004185) #19	CALHM3 (ENSPVAG00000004183) #20	CALHM1 (ENSPVAG00000004182) #21	CALHM2 (ENSPVAG00000004181) #22	PDCD11 (ENSPVAG00000004176) #23	ATP5MK (ENSPVAG00000004175) #24	TAF5 (ENSPVAG00000004172) #25	PCGF6 (ENSPVAG00000004169) #26	INA (ENSPVAG00000004168) #27
Equus	ANCESTRAL SPECIES	9	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Donkey	DUPLICATION
Donkey	MODERN SPECIES	11	CFAP58 (ENSEASG00005015046) #9	ITPRIP (ENSEASG00005035607) #10	GSTO2 (ENSEASG00005015054) #11	CFAP43 (ENSEASG00005023632) #13	GSTO1 (ENSEASG00005015056) #12	SFR1 (ENSEASG00005015065) #14	ENSEASG00005038642	COL17A1 (ENSEASG00005015077) #15	SLK (ENSEASG00005015130) #16	STN1 (ENSEASG00005015134) #17	SH3PXD2A (ENSEASG00005015136) #18	NEURL1 (ENSEASG00005015146) #19	CALHM3 (ENSEASG00005031203) #20	ENSEASG00005028407 #21	ENSEASG00005034926 #22	ENSEASG00005015151 #21	ENSEASG00005027410 #22	PDCD11 (ENSEASG00005015159) #23	ENSEASG00005015170 #24	TAF5 (ENSEASG00005034630) #25	PCGF6 (ENSEASG00005015173) #26	INA (ENSEASG00005015178) #27	NT5C2 (ENSEASG00005015183) #29	CNNM2 (ENSEASG00005015189) #30	AS3MT (ENSEASG00005015193) #31	BORCS7 (ENSEASG00005032646) #32	ENSEASG00005035755	CYP17A1 (ENSEASG00005015197) #33	WBP1L (ENSEASG00005015198) #34	SFXN2 (ENSEASG00005015206) #35	ARL3 (ENSEASG00005037451) #36
Donkey	MODERN SPECIES	11	SORCS3 (ENSEASG00005015034) #8	ENSEASG00005015044	CFAP58 (ENSEASG00005015046) #9	ITPRIP (ENSEASG00005035607) #10	GSTO2 (ENSEASG00005015054) #11	CFAP43 (ENSEASG00005023632) #13	GSTO1 (ENSEASG00005015056) #12	SFR1 (ENSEASG00005015065) #14	ENSEASG00005038642	COL17A1 (ENSEASG00005015077) #15	SLK (ENSEASG00005015130) #16	STN1 (ENSEASG00005015134) #17	SH3PXD2A (ENSEASG00005015136) #18	NEURL1 (ENSEASG00005015146) #19	CALHM3 (ENSEASG00005031203) #20	ENSEASG00005028407 #21	ENSEASG00005034926 #22	ENSEASG00005015151 #21	ENSEASG00005027410 #22	PDCD11 (ENSEASG00005015159) #23	ENSEASG00005015170 #24	TAF5 (ENSEASG00005034630) #25	PCGF6 (ENSEASG00005015173) #26	INA (ENSEASG00005015178) #27	NT5C2 (ENSEASG00005015183) #29	CNNM2 (ENSEASG00005015189) #30	AS3MT (ENSEASG00005015193) #31	BORCS7 (ENSEASG00005032646) #32	ENSEASG00005035755	CYP17A1 (ENSEASG00005015197) #33	WBP1L (ENSEASG00005015198) #34
Horse	MODERN SPECIES		SORCS3 (ENSECAG00000008241) #8	ENSECAG00000054595	CFAP58 (ENSECAG00000019301) #9	ITPRIP (ENSECAG00000010108) #10	GSTO2 (ENSECAG00000058010) #11	ENSECAG00000038610	CFAP43 (ENSECAG00000021278) #13	GSTO1 (ENSECAG00000011560) #12	SFR1 (ENSECAG00000005386) #14	COL17A1 (ENSECAG00000007909) #15	SLK (ENSECAG00000010212) #16	STN1 (ENSECAG00000023477) #17	SH3PXD2A (ENSECAG00000009545) #18	NEURL1 (ENSECAG00000012870) #19	CALHM3 (ENSECAG00000019882) #20	CALHM1 (ENSECAG00000020482) #21	CALHM2 (ENSECAG00000020495) #22	PDCD11 (ENSECAG00000020507) #23	ENSECAG00000028196 #24	TAF5 (ENSECAG00000005853) #25	PCGF6 (ENSECAG00000017183) #26	NT5C2 (ENSECAG00000022574) #29	INA (ENSECAG00000032667) #27	CNNM2 (ENSECAG00000018159) #30	AS3MT (ENSECAG00000018722) #31	ENSECAG00000047543 #32	CYP17A1 (ENSECAG00000010022) #33	WBP1L (ENSECAG00000024142) #34	SFXN2 (ENSECAG00000024231) #35	ARL3 (ENSECAG00000000300) #36	TRIM8 (ENSECAG00000016770) #37
Eulipotyphla	ANCESTRAL SPECIES	104																ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25
Hedgehog	MODERN SPECIES	4500																CALHM1 (ENSEEUG00000010016) #21	CALHM2 (ENSEEUG00000009955) #22	ENSEEUG00000009753	PDCD11 (ENSEEUG00000009245) #23	ATP5MK (ENSEEUG00000009230) #24	TAF5 (ENSEEUG00000009047) #25
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	8531																ENSSARG00000010069 #21
Common shrew	MODERN SPECIES	13470																ENSSARG00000006911 #21
Common shrew	MODERN SPECIES	9441																ENSSARG00000005890 #21
Common shrew	MODERN SPECIES	11711																ENSSARG00000002426 #21
Common shrew	MODERN SPECIES	10463																ENSSARG00000011628 #21
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Tree shrew	MODERN SPECIES	2418													SH3PXD2A (ENSTBEG00000006182) #18	NEURL1 (ENSTBEG00000005609) #19	CALHM3 (ENSTBEG00000004807) #20	ENSTBEG00000004679 #21	CALHM2 (ENSTBEG00000004568) #22	ENSTBEG00000004295	PDCD11 (ENSTBEG00000001893) #23	ATP5MK (ENSTBEG00000001645) #24	TAF5 (ENSTBEG00000000500) #25
Glires	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Rabbit	MODERN SPECIES	9	ENSOCUG00000031917	CFAP58 (ENSOCUG00000008719) #9	ITPRIP (ENSOCUG00000008713) #10	GSTO2 (ENSOCUG00000008708) #11	GSTO1 (ENSOCUG00000008702) #12	CFAP43 (ENSOCUG00000008688) #13	SFR1 (ENSOCUG00000012794) #14	COL17A1 (ENSOCUG00000003049) #15	SLK (ENSOCUG00000003035) #16	ENSOCUG00000038741	STN1 (ENSOCUG00000003028) #17	ENSOCUG00000037086	SH3PXD2A (ENSOCUG00000013769) #18	NEURL1 (ENSOCUG00000013760) #19	CALHM3 (ENSOCUG00000025668) #20	CALHM1 (ENSOCUG00000027986) #21	CALHM2 (ENSOCUG00000006336) #22	PDCD11 (ENSOCUG00000006312) #23	ENSOCUG00000033131 #24	TAF5 (ENSOCUG00000006303) #25	PCGF6 (ENSOCUG00000012441) #26	INA (ENSOCUG00000004969) #27	ENSOCUG00000009107	CNNM2 (ENSOCUG00000009098) #30	AS3MT (ENSOCUG00000000626) #31	ENSOCUG00000037788 #32	ENSOCUG00000023839	CYP17A1 (ENSOCUG00000017790) #33	WBP1L (ENSOCUG00000021890) #34	SFXN2 (ENSOCUG00000025541) #35	ARL3 (ENSOCUG00000005792) #36
Pika	MODERN SPECIES	2102						GSTO2 (ENSOPRG00000010910) #11	GSTO1 (ENSOPRG00000010894) #12	CFAP43 (ENSOPRG00000010835) #13	SFR1 (ENSOPRG00000010818) #14	COL17A1 (ENSOPRG00000010749) #15	SLK (ENSOPRG00000010724) #16	STN1 (ENSOPRG00000010707) #17	SH3PXD2A (ENSOPRG00000010687) #18	NEURL1 (ENSOPRG00000010668) #19	CALHM3 (ENSOPRG00000010659) #20	CALHM1 (ENSOPRG00000010656) #21	CALHM2 (ENSOPRG00000010654) #22	PDCD11 (ENSOPRG00000010593) #23	ATP5MK (ENSOPRG00000010588) #24	ENSOPRG00000010551 #25
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Chinese hamster chok1gshd	MODERN SPECIES	215	Xpnpep1 (ENSCGRG00001023199)	Sorcs1 (ENSCGRG00001015262) #7	Sorcs3 (ENSCGRG00001013586) #8	Cfap58 (ENSCGRG00001018536) #9	Itprip (ENSCGRG00001015730) #10	Gsto2 (ENSCGRG00001019874) #11	Gsto1 (ENSCGRG00001001908) #12	Cfap43 (ENSCGRG00001011254) #13	ENSCGRG00001015549 #14	Col17a1 (ENSCGRG00001022203) #15	Slk (ENSCGRG00001015388) #16	Stn1 (ENSCGRG00001023175) #17	Sh3pxd2a (ENSCGRG00001019958) #18	Neurl1a (ENSCGRG00001021464) #19	Calhm3 (ENSCGRG00001022306) #20	Calhm1 (ENSCGRG00001023224) #21	Calhm2 (ENSCGRG00001023936) #22	Pdcd11 (ENSCGRG00001006458) #23	Taf5 (ENSCGRG00001008015) #25	ENSCGRG00001009088 #24	Pcgf6 (ENSCGRG00001007808) #26	Ina (ENSCGRG00001017461) #27	Nt5c2 (ENSCGRG00001021778) #29	Cnnm2 (ENSCGRG00001022341) #30	As3mt (ENSCGRG00001009254) #31	Borcs7 (ENSCGRG00001018546) #32	Cyp17a1 (ENSCGRG00001019418) #33	ENSCGRG00001012898 #34	Sfxn2 (ENSCGRG00001018053) #35	Arl3 (ENSCGRG00001020323) #36	Trim8 (ENSCGRG00001024342) #37
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Prairie vole	MODERN SPECIES	16	Xpnpep1 (ENSMOCG00000018997)	Sorcs1 (ENSMOCG00000013093) #7	Sorcs3 (ENSMOCG00000022537) #8	Cfap58 (ENSMOCG00000019696) #9	Itprip (ENSMOCG00000018021) #10	Gsto2 (ENSMOCG00000016225) #11	Gsto1 (ENSMOCG00000009660) #12	Cfap43 (ENSMOCG00000020363) #13	Sfr1 (ENSMOCG00000008461) #14	Col17a1 (ENSMOCG00000011193) #15	Slk (ENSMOCG00000017350) #16	Stn1 (ENSMOCG00000009637) #17	Sh3pxd2a (ENSMOCG00000019474) #18	Neurl1a (ENSMOCG00000022886) #19	Calhm3 (ENSMOCG00000021541) #20	Calhm1 (ENSMOCG00000000659) #21	Calhm2 (ENSMOCG00000018955) #22	Pdcd11 (ENSMOCG00000021792) #23	ENSMOCG00000013733 #24	Taf5 (ENSMOCG00000014640) #25	Pcgf6 (ENSMOCG00000014072) #26	ENSMOCG00000015820 #27	Nt5c2 (ENSMOCG00000017482) #29	ENSMOCG00000002709	Cnnm2 (ENSMOCG00000015680) #30	As3mt (ENSMOCG00000008340) #31	Borcs7 (ENSMOCG00000013474) #32	Cyp17a1 (ENSMOCG00000003696) #33	Wbp1l (ENSMOCG00000022618) #34	Sfxn2 (ENSMOCG00000018233) #35	Arl3 (ENSMOCG00000015961) #36
Northern American deer mouse	MODERN SPECIES		ENSPEMG00000025798	ENSPEMG00000026304	Sorcs3 (ENSPEMG00000016181) #8	Cfap58 (ENSPEMG00000023665) #9	Itprip (ENSPEMG00000025439) #10	Gsto2 (ENSPEMG00000013574) #11	ENSPEMG00000000407 #12	Cfap43 (ENSPEMG00000007262) #13	ENSPEMG00000010098 #14	Col17a1 (ENSPEMG00000010272) #15	Slk (ENSPEMG00000003363) #16	Stn1 (ENSPEMG00000013944) #17	Sh3pxd2a (ENSPEMG00000028132) #18	Neurl1a (ENSPEMG00000000552) #19	Calhm3 (ENSPEMG00000018627) #20	Calhm1 (ENSPEMG00000010575) #21	Calhm2 (ENSPEMG00000016278) #22	Pdcd11 (ENSPEMG00000010315) #23	ENSPEMG00000000483 #24	Taf5 (ENSPEMG00000002770) #25	Pcgf6 (ENSPEMG00000003171) #26	Ina (ENSPEMG00000007890) #27	Nt5c2 (ENSPEMG00000003970) #29	Cnnm2 (ENSPEMG00000017920) #30	As3mt (ENSPEMG00000011699) #31	Borcs7 (ENSPEMG00000030674) #32	Cyp17a1 (ENSPEMG00000016883) #33	Wbp1l (ENSPEMG00000002955) #34	Sfxn2 (ENSPEMG00000012438) #35	Arl3 (ENSPEMG00000012608) #36	Trim8 (ENSPEMG00000027998) #37
Murinae	ANCESTRAL SPECIES		ENSGT00390000015440.a	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mus	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mus_A	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Mus_C	ANCESTRAL SPECIES	24	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Steppe mouse	MODERN SPECIES	3428	ENSMSIG00000031421	Sorcs3 (ENSMSIG00000031425) #8	Cfap58 (ENSMSIG00000031428) #9	Itprip (ENSMSIG00000031430) #10	Gsto2 (ENSMSIG00000031431) #11	Gsto1 (ENSMSIG00000031433) #12	Cfap43 (ENSMSIG00000031434) #13	Sfr1 (ENSMSIG00000031436) #14	Col17a1 (ENSMSIG00000031440) #15	Slk (ENSMSIG00000031453) #16	Stn1 (ENSMSIG00000031463) #17	Sh3pxd2a (ENSMSIG00000031465) #18	Neurl1a (ENSMSIG00000031466) #19	ENSMSIG00000031470	Calhm3 (ENSMSIG00000031471) #20	Calhm1 (ENSMSIG00000031472) #21	Calhm2 (ENSMSIG00000031473) #22	Pdcd11 (ENSMSIG00000031474) #23	ENSMSIG00000031479 #24	Taf5 (ENSMSIG00000031481) #25	Pcgf6 (ENSMSIG00000031488) #26	Ina (ENSMSIG00000031490) #27	Nt5c2 (ENSMSIG00000031492) #29	Cnnm2 (ENSMSIG00000031498) #30	As3mt (ENSMSIG00000031511) #31	ENSMSIG00000031515
spretus	MODERN SPECIES	10	Ins1 (MGP_SPRETEiJ_G0023988)	Sorcs1 (MGP_SPRETEiJ_G0023987) #7	Sorcs3 (MGP_SPRETEiJ_G0023986) #8	Cfap58 (MGP_SPRETEiJ_G0023985) #9	Gsto2 (MGP_SPRETEiJ_G0023984) #11	Gsto1 (MGP_SPRETEiJ_G0023983) #12	Cfap43 (MGP_SPRETEiJ_G0023982) #13	Sfr1 (MGP_SPRETEiJ_G0023981) #14	Col17a1 (MGP_SPRETEiJ_G0023980) #15	Slk (MGP_SPRETEiJ_G0023979) #16	Stn1 (MGP_SPRETEiJ_G0023978) #17	Sh3pxd2a (MGP_SPRETEiJ_G0023977) #18	Neurl1a (MGP_SPRETEiJ_G0023976) #19	MGP_SPRETEiJ_G0023975	MGP_SPRETEiJ_G0023974 #20	Calhm1 (MGP_SPRETEiJ_G0023973) #21	Calhm2 (MGP_SPRETEiJ_G0023972) #22	Pdcd11 (MGP_SPRETEiJ_G0023971) #23	Taf5 (MGP_SPRETEiJ_G0023970) #25	Pcgf6 (MGP_SPRETEiJ_G0023969) #26	Ina (MGP_SPRETEiJ_G0023968) #27	Nt5c2 (MGP_SPRETEiJ_G0023967) #29	Cnnm2 (MGP_SPRETEiJ_G0023966) #30	As3mt (MGP_SPRETEiJ_G0023965) #31	Borcs7 (MGP_SPRETEiJ_G0023964) #32	Cyp17a1 (MGP_SPRETEiJ_G0023963) #33	Wbp1l (MGP_SPRETEiJ_G0023962) #34	Sfxn2 (MGP_SPRETEiJ_G0023961) #35	Arl3 (MGP_SPRETEiJ_G0023960) #36	Trim8 (MGP_SPRETEiJ_G0023959) #37	Sufu (MGP_SPRETEiJ_G0023958)
Mouse	MODERN SPECIES	10	Ins1 (ENSMUSG00000035804)	Sorcs1 (ENSMUSG00000043531) #7	Sorcs3 (ENSMUSG00000063434) #8	Cfap58 (ENSMUSG00000046585) #9	Itprip (ENSMUSG00000117975) #10	Gsto2 (ENSMUSG00000025069) #11	Gsto1 (ENSMUSG00000025068) #12	Cfap43 (ENSMUSG00000044948) #13	Sfr1 (ENSMUSG00000025066) #14	Col17a1 (ENSMUSG00000025064) #15	Slk (ENSMUSG00000025060) #16	Stn1 (ENSMUSG00000042694) #17	Sh3pxd2a (ENSMUSG00000053617) #18	Neurl1a (ENSMUSG00000006435) #19	Calhm3 (ENSMUSG00000094219) #20	Calhm1 (ENSMUSG00000079258) #21	Calhm2 (ENSMUSG00000033033) #22	Pdcd11 (ENSMUSG00000025047) #23	Atp5md (ENSMUSG00000071528) #24	Taf5 (ENSMUSG00000025049) #25	Pcgf6 (ENSMUSG00000025050) #26	Ina (ENSMUSG00000034336) #27	Nt5c2 (ENSMUSG00000025041) #29	Cnnm2 (ENSMUSG00000064105) #30	As3mt (ENSMUSG00000003559) #31	Borcs7 (ENSMUSG00000062376) #32	Cyp17a1 (ENSMUSG00000003555) #33	Wbp1l (ENSMUSG00000047731) #34	Sfxn2 (ENSMUSG00000025036) #35	Arl3 (ENSMUSG00000025035) #36	Trim8 (ENSMUSG00000025034) #37
Ryukyu mouse	MODERN SPECIES	10	Ins1 (MGP_CAROLIEiJ_G0023067)	Sorcs1 (MGP_CAROLIEiJ_G0023066) #7	Sorcs3 (MGP_CAROLIEiJ_G0023065) #8	Cfap58 (MGP_CAROLIEiJ_G0023064) #9	Gsto2 (MGP_CAROLIEiJ_G0023063) #11	Gsto1 (MGP_CAROLIEiJ_G0023062) #12	Itprip (MGP_CAROLIEiJ_G0023061) #10	Sfr1 (MGP_CAROLIEiJ_G0023060) #14	Col17a1 (MGP_CAROLIEiJ_G0023059) #15	Slk (MGP_CAROLIEiJ_G0023058) #16	Stn1 (MGP_CAROLIEiJ_G0023057) #17	Sh3pxd2a (MGP_CAROLIEiJ_G0023056) #18	Neurl1a (MGP_CAROLIEiJ_G0023055) #19	MGP_CAROLIEiJ_G0023054	Calhm3 (MGP_CAROLIEiJ_G0023053) #20	Calhm1 (MGP_CAROLIEiJ_G0023052) #21	Calhm2 (MGP_CAROLIEiJ_G0023051) #22	Pdcd11 (MGP_CAROLIEiJ_G0023050) #23	Taf5 (MGP_CAROLIEiJ_G0023049) #25	Pcgf6 (MGP_CAROLIEiJ_G0023048) #26	Ina (MGP_CAROLIEiJ_G0023047) #27	Nt5c2 (MGP_CAROLIEiJ_G0023046) #29	Cnnm2 (MGP_CAROLIEiJ_G0023045) #30	As3mt (MGP_CAROLIEiJ_G0023044) #31	Borcs7 (MGP_CAROLIEiJ_G0023043) #32	MGP_CAROLIEiJ_G0023042 #33	Wbp1l (MGP_CAROLIEiJ_G0023041) #34	Sfxn2 (MGP_CAROLIEiJ_G0023040) #35	Arl3 (MGP_CAROLIEiJ_G0023039) #36	Trim8 (MGP_CAROLIEiJ_G0023038) #37	Sufu (MGP_CAROLIEiJ_G0023037)
Shrew mouse	MODERN SPECIES		Ins1 (MGP_PahariEiJ_G0014557)	Sorcs1 (MGP_PahariEiJ_G0014556) #7	Sorcs3 (MGP_PahariEiJ_G0014555) #8	Cfap58 (MGP_PahariEiJ_G0014554) #9	MGP_PahariEiJ_G0014553 #11	Gsto1 (MGP_PahariEiJ_G0014552) #12	Cfap43 (MGP_PahariEiJ_G0014551) #13	Sfr1 (MGP_PahariEiJ_G0014550) #14	Col17a1 (MGP_PahariEiJ_G0014549) #15	Slk (MGP_PahariEiJ_G0014548) #16	Stn1 (MGP_PahariEiJ_G0014547) #17	Sh3pxd2a (MGP_PahariEiJ_G0014546) #18	Neurl1a (MGP_PahariEiJ_G0014545) #19	MGP_PahariEiJ_G0014544	Calhm3 (MGP_PahariEiJ_G0014543) #20	Calhm1 (MGP_PahariEiJ_G0014542) #21	Calhm2 (MGP_PahariEiJ_G0014541) #22	Pdcd11 (MGP_PahariEiJ_G0014540) #23	Taf5 (MGP_PahariEiJ_G0014539) #25	Pcgf6 (MGP_PahariEiJ_G0014538) #26	Ina (MGP_PahariEiJ_G0014537) #27	Cnnm2 (MGP_PahariEiJ_G0014535) #30	As3mt (MGP_PahariEiJ_G0014534) #31	Borcs7 (MGP_PahariEiJ_G0014533) #32	Cyp17a1 (MGP_PahariEiJ_G0014532) #33	Wbp1l (MGP_PahariEiJ_G0014531) #34	Sfxn2 (MGP_PahariEiJ_G0014530) #35	Arl3 (MGP_PahariEiJ_G0014529) #36	Trim8 (MGP_PahariEiJ_G0014528) #37	Sufu (MGP_PahariEiJ_G0014527)	Actr1a (MGP_PahariEiJ_G0014526)
Rat	MODERN SPECIES		Ins1 (ENSRNOG00000012052)	Sorcs1 (ENSRNOG00000011313) #7	Sorcs3 (ENSRNOG00000028832) #8	Cfap58 (ENSRNOG00000049596) #9	Itprip (ENSRNOG00000046036) #10	Gsto2 (ENSRNOG00000069697) #11	Gsto1 (ENSRNOG00000028746) #12	Cfap43 (ENSRNOG00000036585) #13	Sfr1 (ENSRNOG00000012641) #14	Col17a1 (ENSRNOG00000012110) #15	Slk (ENSRNOG00000011339) #16	Stn1 (ENSRNOG00000020376) #17	Sh3pxd2a (ENSRNOG00000020353) #18	Neurl1 (ENSRNOG00000020339) #19	Calhm3 (ENSRNOG00000026086) #20	Calhm1 (ENSRNOG00000030682) #21	Calhm2 (ENSRNOG00000020325) #22	Pdcd11 (ENSRNOG00000020304) #23	Atp5mk (ENSRNOG00000020296) #24	Taf5 (ENSRNOG00000020274) #25	Pcgf6 (ENSRNOG00000020250) #26	Ina (ENSRNOG00000020248) #27	Nt5c2 (ENSRNOG00000020179) #29	Cnnm2 (ENSRNOG00000020113) #30	As3mt (ENSRNOG00000020081) #31	Borcs7 (ENSRNOG00000020076) #32	Cyp17a1 (ENSRNOG00000020035) #33	Wbp1l (ENSRNOG00000020020) #34	Sfxn2 (ENSRNOG00000066618) #35	Arl3 (ENSRNOG00000019973) #36	Trim8 (ENSRNOG00000019968) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300				Sorcs1 (ENSNGAG00000022400) #7	Sorcs3 (ENSNGAG00000009911) #8	Cfap58 (ENSNGAG00000023340) #9	Gsto2 (ENSNGAG00000023312) #11	Gsto1 (ENSNGAG00000016801) #12	Col17a1 (ENSNGAG00000014613) #15	Slk (ENSNGAG00000013115) #16	Stn1 (ENSNGAG00000023986) #17	ENSNGAG00000022667	Sh3pxd2a (ENSNGAG00000005200) #18	Neurl1a (ENSNGAG00000008250) #19	Calhm3 (ENSNGAG00000003356) #20	Calhm1 (ENSNGAG00000022846) #21	Calhm2 (ENSNGAG00000021638) #22	Pdcd11 (ENSNGAG00000018143) #23	Atp5md (ENSNGAG00000019237) #24	Taf5 (ENSNGAG00000019082) #25	Pcgf6 (ENSNGAG00000004236) #26	Ina (ENSNGAG00000023775) #27	ENSNGAG00000020356	Nt5c2 (ENSNGAG00000014147) #29	Cnnm2 (ENSNGAG00000021894) #30	As3mt (ENSNGAG00000021235) #31	Borcs7 (ENSNGAG00000020067) #32	Cyp17a1 (ENSNGAG00000023337) #33	Wbp1l (ENSNGAG00000006319) #34	Sfxn2 (ENSNGAG00000013387) #35	Arl3 (ENSNGAG00000024014) #36
Lesser Egyptian jerboa	MODERN SPECIES	70	ENSJJAG00000023532	Sorcs3 (ENSJJAG00000012838) #8	Cfap58 (ENSJJAG00000022379) #9	ENSJJAG00000016144	ENSJJAG00000021535	Itprip (ENSJJAG00000000469) #10	Gsto2 (ENSJJAG00000014900) #11	Gsto1 (ENSJJAG00000018251) #12	Cfap43 (ENSJJAG00000024398) #13	Col17a1 (ENSJJAG00000020946) #15	Slk (ENSJJAG00000017467) #16	Stn1 (ENSJJAG00000020389) #17	Sh3pxd2a (ENSJJAG00000010532) #18	Neurl1a (ENSJJAG00000015435) #19	Calhm3 (ENSJJAG00000022667) #20	Calhm1 (ENSJJAG00000009035) #21	Calhm2 (ENSJJAG00000017511) #22	Pdcd11 (ENSJJAG00000015523) #23	Atp5md (ENSJJAG00000018060) #24	Taf5 (ENSJJAG00000002025) #25	Ina (ENSJJAG00000024219) #27	Nt5c2 (ENSJJAG00000023674) #29	Cnnm2 (ENSJJAG00000024042) #30	As3mt (ENSJJAG00000017269) #31	Borcs7 (ENSJJAG00000019848) #32	ENSJJAG00000007546	Cyp17a1 (ENSJJAG00000020313) #33	Wbp1l (ENSJJAG00000005618) #34	Sfxn2 (ENSJJAG00000020334) #35	Arl3 (ENSJJAG00000001249) #36	Trim8 (ENSJJAG00000022961) #37
Kangaroo rat	MODERN SPECIES	355	Sorcs1 (ENSDORG00000002322) #7	Sorcs3 (ENSDORG00000001731) #8	Cfap58 (ENSDORG00000004546) #9	Itprip (ENSDORG00000008954) #10	Gsto2 (ENSDORG00000008953) #11	Gsto1 (ENSDORG00000008950) #12	Cfap43 (ENSDORG00000008947) #13	ENSDORG00000008943 #14	ENSDORG00000028434	Col17a1 (ENSDORG00000009335) #15	Slk (ENSDORG00000008154) #16	Stn1 (ENSDORG00000005994) #17	Sh3pxd2a (ENSDORG00000010430) #18	Neurl1a (ENSDORG00000010429) #19	Calhm3 (ENSDORG00000010428) #20	Calhm1 (ENSDORG00000010427) #21	Calhm2 (ENSDORG00000010426) #22	Pdcd11 (ENSDORG00000010420) #23	Atp5md (ENSDORG00000010419) #24	Taf5 (ENSDORG00000010418) #25	Pcgf6 (ENSDORG00000027870) #26	Ina (ENSDORG00000027651) #27	Nt5c2 (ENSDORG00000005467) #29	As3mt (ENSDORG00000010407) #31	Borcs7 (ENSDORG00000004480) #32	Cyp17a1 (ENSDORG00000006774) #33	Wbp1l (ENSDORG00000002274) #34	Sfxn2 (ENSDORG00000002258) #35	Arl3 (ENSDORG00000012086) #36	Trim8 (ENSDORG00000027571) #37	Sufu (ENSDORG00000003105)
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00950000182960.a.a.a.b.eb	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Marmotini	ANCESTRAL SPECIES	16	ENSGT00950000182960.a.a.a.b.eb	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Marmotini_b	ANCESTRAL SPECIES	76			ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Arctic ground squirrel	MODERN SPECIES	239			SORCS3 (ENSUPAG00010020130) #8	CFAP58 (ENSUPAG00010020153) #9	ITPRIP (ENSUPAG00010020162) #10	GSTO2 (ENSUPAG00010020166) #11	GSTO1 (ENSUPAG00010020173) #12	ENSUPAG00010020178 #13	SFR1 (ENSUPAG00010020181) #14	COL17A1 (ENSUPAG00010020186) #15	SLK (ENSUPAG00010020310) #16	STN1 (ENSUPAG00010020348) #17	SH3PXD2A (ENSUPAG00010020358) #18	NEURL1 (ENSUPAG00010020402) #19	CALHM3 (ENSUPAG00010020411) #20	CALHM1 (ENSUPAG00010020414) #21	CALHM2 (ENSUPAG00010020415) #22	PDCD11 (ENSUPAG00010020419) #23	ATP5MK (ENSUPAG00010020448) #24	TAF5 (ENSUPAG00010020451) #25	PCGF6 (ENSUPAG00010020458) #26	INA (ENSUPAG00010020463) #27	NT5C2 (ENSUPAG00010020468) #29	CNNM2 (ENSUPAG00010020490) #30	AS3MT (ENSUPAG00010020500) #31	BORCS7 (ENSUPAG00010020508) #32	CYP17A1 (ENSUPAG00010020514) #33	WBP1L (ENSUPAG00010020520) #34	SFXN2 (ENSUPAG00010020522) #35	ARL3 (ENSUPAG00010020532) #36	TRIM8 (ENSUPAG00010020545) #37
Squirrel	MODERN SPECIES	200			SORCS3 (ENSSTOG00000015559) #8	CFAP58 (ENSSTOG00000004618) #9	ITPRIP (ENSSTOG00000020489) #10	GSTO2 (ENSSTOG00000013405) #11	GSTO1 (ENSSTOG00000013401) #12	ENSSTOG00000013381 #13	SFR1 (ENSSTOG00000013376) #14	COL17A1 (ENSSTOG00000013352) #15	SLK (ENSSTOG00000013329) #16	STN1 (ENSSTOG00000011905) #17	SH3PXD2A (ENSSTOG00000007057) #18	NEURL1 (ENSSTOG00000023895) #19	CALHM3 (ENSSTOG00000025172) #20	CALHM1 (ENSSTOG00000014605) #21	CALHM2 (ENSSTOG00000014597) #22	PDCD11 (ENSSTOG00000014553) #23	ATP5MK (ENSSTOG00000029901) #24	TAF5 (ENSSTOG00000014536) #25	PCGF6 (ENSSTOG00000014511) #26	INA (ENSSTOG00000026141) #27	ENSSTOG00000012380	CNNM2 (ENSSTOG00000014497) #30	AS3MT (ENSSTOG00000014490) #31	BORCS7 (ENSSTOG00000019613) #32	CYP17A1 (ENSSTOG00000014469) #33	ENSSTOG00000026185 #34	SFXN2 (ENSSTOG00000014456) #35	ARL3 (ENSSTOG00000014453) #36	TRIM8 (ENSSTOG00000008270) #37
Alpin marmot	MODERN SPECIES	39	SORCS1 (ENSMMMG00000001325) #7	SORCS3 (ENSMMMG00000001241) #8	CFAP58 (ENSMMMG00000001204) #9	ITPRIP (ENSMMMG00000001191) #10	GSTO2 (ENSMMMG00000001167) #11	GSTO1 (ENSMMMG00000001145) #12	ENSMMMG00000001103	CFAP43 (ENSMMMG00000000749) #13	SFR1 (ENSMMMG00000000727) #14	COL17A1 (ENSMMMG00000000492) #15	SLK (ENSMMMG00000000361) #16	STN1 (ENSMMMG00000000299) #17	SH3PXD2A (ENSMMMG00000000203) #18	NEURL1 (ENSMMMG00000000158) #19	CALHM3 (ENSMMMG00000000131) #20	CALHM1 (ENSMMMG00000000112) #21	CALHM2 (ENSMMMG00000000103) #22	PDCD11 (ENSMMMG00000000038) #23	ENSMMMG00000023417 #24	TAF5 (ENSMMMG00000023414) #25	ENSMMMG00000023410 #26	INA (ENSMMMG00000023409) #27	NT5C2 (ENSMMMG00000023399) #29	CNNM2 (ENSMMMG00000023389) #30	AS3MT (ENSMMMG00000023383) #31	BORCS7 (ENSMMMG00000023381) #32	CYP17A1 (ENSMMMG00000023378) #33	ENSMMMG00000023372 #34	SFXN2 (ENSMMMG00000023370) #35	ENSMMMG00000023361 #36	TRIM8 (ENSMMMG00000023360) #37
Eurasian red squirrel	MODERN SPECIES	13	XPNPEP1 (ENSSVLG00005001845)	ENSSVLG00005001899	ENSSVLG00005001943	SORCS1 (ENSSVLG00005002050) #7	SORCS3 (ENSSVLG00005002348) #8	CFAP58 (ENSSVLG00005002434) #9	ITPRIP (ENSSVLG00005002474) #10	CFAP43 (ENSSVLG00005002510) #13	ENSSVLG00005002622 #14	COL17A1 (ENSSVLG00005002694) #15	SLK (ENSSVLG00005002929) #16	STN1 (ENSSVLG00005002979) #17	ENSSVLG00005003038 #18	NEURL1 (ENSSVLG00005003109) #19	CALHM3 (ENSSVLG00005003127) #20	CALHM1 (ENSSVLG00005003146) #21	CALHM2 (ENSSVLG00005003154) #22	PDCD11 (ENSSVLG00005003201) #23	ENSSVLG00005003328	ENSSVLG00005003341 #24	TAF5 (ENSSVLG00005003365) #25	PCGF6 (ENSSVLG00005003419) #26	INA (ENSSVLG00005003457) #27	NT5C2 (ENSSVLG00005003493) #29	CNNM2 (ENSSVLG00005003556) #30	AS3MT (ENSSVLG00005003598) #31	BORCS7 (ENSSVLG00005003641) #32	CYP17A1 (ENSSVLG00005003699) #33	ENSSVLG00005003793 #34	SFXN2 (ENSSVLG00005003816) #35	ARL3 (ENSSVLG00005003847) #36
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Long-tailed chinchilla	MODERN SPECIES	192	SORCS1 (ENSCLAG00000003479) #7	SORCS3 (ENSCLAG00000001473) #8	CFAP58 (ENSCLAG00000001586) #9	ITPRIP (ENSCLAG00000001636) #10	GSTO2 (ENSCLAG00000001887) #11	GSTO1 (ENSCLAG00000001308) #12	ENSCLAG00000017434	CFAP43 (ENSCLAG00000001343) #13	SFR1 (ENSCLAG00000001521) #14	ENSCLAG00000001543	SLK (ENSCLAG00000001596) #16	STN1 (ENSCLAG00000001617) #17	SH3PXD2A (ENSCLAG00000001679) #18	ENSCLAG00000001821 #19	CALHM3 (ENSCLAG00000001834) #20	CALHM1 (ENSCLAG00000001842) #21	CALHM2 (ENSCLAG00000001846) #22	PDCD11 (ENSCLAG00000001029) #23	ATP5MK (ENSCLAG00000001049) #24	TAF5 (ENSCLAG00000001063) #25	PCGF6 (ENSCLAG00000001188) #26	ENSCLAG00000001199 #27	NT5C2 (ENSCLAG00000001259) #29	ENSCLAG00000017436	CNNM2 (ENSCLAG00000001443) #30	AS3MT (ENSCLAG00000001482) #31	BORCS7 (ENSCLAG00000001557) #32	CYP17A1 (ENSCLAG00000000920) #33	WBP1L (ENSCLAG00000000978) #34	SFXN2 (ENSCLAG00000001037) #35	ARL3 (ENSCLAG00000001055) #36
Degu	MODERN SPECIES	83	ENSODEG00000007723	SORCS1 (ENSODEG00000008187) #7	SORCS3 (ENSODEG00000009208) #8	CFAP58 (ENSODEG00000011571) #9	GSTO2 (ENSODEG00000007911) #11	GSTO1 (ENSODEG00000011067) #12	ENSODEG00000019763	CFAP43 (ENSODEG00000009391) #13	COL17A1 (ENSODEG00000007918) #15	ENSODEG00000008493	SLK (ENSODEG00000008144) #16	STN1 (ENSODEG00000007270) #17	SH3PXD2A (ENSODEG00000009308) #18	NEURL1 (ENSODEG00000007869) #19	CALHM3 (ENSODEG00000007501) #20	CALHM1 (ENSODEG00000008264) #21	CALHM2 (ENSODEG00000008107) #22	PDCD11 (ENSODEG00000008079) #23	ENSODEG00000009533 #24	TAF5 (ENSODEG00000009100) #25	ENSODEG00000007978	PCGF6 (ENSODEG00000007645) #26	INA (ENSODEG00000008267) #27	NT5C2 (ENSODEG00000012028) #29	ENSODEG00000009282	CNNM2 (ENSODEG00000008114) #30	AS3MT (ENSODEG00000008429) #31	BORCS7 (ENSODEG00000009160) #32	CYP17A1 (ENSODEG00000008480) #33	ENSODEG00000008163	ENSODEG00000019732
Guinea pig	MODERN SPECIES	11	ENSCPOG00000040652	SORCS1 (ENSCPOG00000012755) #7	SORCS3 (ENSCPOG00000014152) #8	CFAP58 (ENSCPOG00000000492) #9	ITPRIP (ENSCPOG00000037693) #10	GSTO2 (ENSCPOG00000012825) #11	GSTO1 (ENSCPOG00000001014) #12	CFAP43 (ENSCPOG00000001007) #13	SFR1 (ENSCPOG00000001002) #14	COL17A1 (ENSCPOG00000000997) #15	SLK (ENSCPOG00000000992) #16	STN1 (ENSCPOG00000006273) #17	SH3PXD2A (ENSCPOG00000006269) #18	NEURL1 (ENSCPOG00000006578) #19	CALHM3 (ENSCPOG00000013132) #20	CALHM1 (ENSCPOG00000010968) #21	CALHM2 (ENSCPOG00000040598) #22	PDCD11 (ENSCPOG00000010957) #23	ATP5MK (ENSCPOG00000005303) #24	TAF5 (ENSCPOG00000005294) #25	PCGF6 (ENSCPOG00000004021) #26	INA (ENSCPOG00000004030) #27	NT5C2 (ENSCPOG00000015748) #29	CNNM2 (ENSCPOG00000015746) #30	BORCS7 (ENSCPOG00000032430) #32	CYP17A1 (ENSCPOG00000014546) #33	WBP1L (ENSCPOG00000033991) #34	SFXN2 (ENSCPOG00000014474) #35	ARL3 (ENSCPOG00000014473) #36	TRIM8 (ENSCPOG00000012305) #37	SUFU (ENSCPOG00000011097)
Naked mole-rat female	MODERN SPECIES	4	SORCS1 (ENSHGLG00000002729) #7	ENSHGLG00000039825	SORCS3 (ENSHGLG00000001754) #8	CFAP58 (ENSHGLG00000002793) #9	ITPRIP (ENSHGLG00000046163) #10	GSTO2 (ENSHGLG00000049945) #11	GSTO1 (ENSHGLG00000002485) #12	CFAP43 (ENSHGLG00000035856) #13	ENSHGLG00000033849 #14	COL17A1 (ENSHGLG00000003598) #15	SLK (ENSHGLG00000003084) #16	STN1 (ENSHGLG00000002775) #17	SH3PXD2A (ENSHGLG00000002064) #18	NEURL1 (ENSHGLG00000001530) #19	CALHM3 (ENSHGLG00000002195) #20	CALHM1 (ENSHGLG00000002126) #21	CALHM2 (ENSHGLG00000002007) #22	PDCD11 (ENSHGLG00000001462) #23	ENSHGLG00000045467	ENSHGLG00000003034	TAF5 (ENSHGLG00000002753) #25	ENSHGLG00000002539 #26	INA (ENSHGLG00000002478) #27	NT5C2 (ENSHGLG00000003370) #29	CNNM2 (ENSHGLG00000002477) #30	ENSHGLG00000037786	ENSHGLG00000037019	ENSHGLG00000036337 #32	CYP17A1 (ENSHGLG00000002087) #33	WBP1L (ENSHGLG00000036528) #34	ARL3 (ENSHGLG00000038237) #36
Primates	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Simiiformes	ANCESTRAL SPECIES	17	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Catarrhini	ANCESTRAL SPECIES	18	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Hominoidea	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00910000146943	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Hominidae	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00910000146943	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Pan	ANCESTRAL SPECIES	16	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Bonobo	MODERN SPECIES	1	SORCS3 (ENSPPAG00000040207) #8	CFAP58 (ENSPPAG00000029617) #9	ITPRIP (ENSPPAG00000001710) #10	ENSPPAG00000011308	GSTO2 (ENSPPAG00000030499) #11	GSTO1 (ENSPPAG00000029433) #12	CFAP43 (ENSPPAG00000040294) #13	SFR1 (ENSPPAG00000037316) #14	ENSPPAG00000031577 #15	SLK (ENSPPAG00000043689) #16	STN1 (ENSPPAG00000030947) #17	SH3PXD2A (ENSPPAG00000040068) #18	ENSPPAG00000007628	ENSPPAG00000035559 #19	CALHM3 (ENSPPAG00000008882) #20	CALHM1 (ENSPPAG00000037598) #21	CALHM2 (ENSPPAG00000031003) #22	PDCD11 (ENSPPAG00000024593) #23	ATP5MK (ENSPPAG00000031402) #24	TAF5 (ENSPPAG00000038777) #25	ENSPPAG00000041879 #26	INA (ENSPPAG00000038377) #27	ENSPPAG00000032885 ##28	NT5C2 (ENSPPAG00000044029) #29	CNNM2 (ENSPPAG00000031457) #30	AS3MT (ENSPPAG00000040457) #31	ENSPPAG00000038677 #32	CYP17A1 (ENSPPAG00000033616) #33	WBP1L (ENSPPAG00000025524) #34	SFXN2 (ENSPPAG00000032477) #35	ARL3 (ENSPPAG00000034961) #36
Chimpanzee	MODERN SPECIES	1	SORCS3 (ENSPTRG00000052782) #8	CFAP58 (ENSPTRG00000002928) #9	ITPRIP (ENSPTRG00000049544) #10	ENSPTRG00000045459	GSTO2 (ENSPTRG00000002926) #11	GSTO1 (ENSPTRG00000002925) #12	CFAP43 (ENSPTRG00000002924) #13	SFR1 (ENSPTRG00000002922) #14	COL17A1 (ENSPTRG00000002921) #15	SLK (ENSPTRG00000002920) #16	STN1 (ENSPTRG00000002919) #17	SH3PXD2A (ENSPTRG00000047766) #18	ENSPTRG00000046888	NEURL1 (ENSPTRG00000049609) #19	CALHM3 (ENSPTRG00000002915) #20	CALHM1 (ENSPTRG00000002914) #21	CALHM2 (ENSPTRG00000002913) #22	PDCD11 (ENSPTRG00000002911) #23	ATP5MK (ENSPTRG00000002910) #24	TAF5 (ENSPTRG00000002909) #25	PCGF6 (ENSPTRG00000002908) #26	INA (ENSPTRG00000002907) #27	ENSPTRG00000043239 ##28	NT5C2 (ENSPTRG00000002905) #29	CNNM2 (ENSPTRG00000002904) #30	AS3MT (ENSPTRG00000033989) #31	ENSPTRG00000002902 #32	CYP17A1 (ENSPTRG00000002900) #33	WBP1L (ENSPTRG00000049387) #34	SFXN2 (ENSPTRG00000002898) #35	ARL3 (ENSPTRG00000045593) #36
Human	MODERN SPECIES	1	XPNPEP1 (ENSG00000108039)	SORCS1 (ENSG00000108018) #7	SORCS3 (ENSG00000156395) #8	CFAP58 (ENSG00000120051) #9	ITPRIP (ENSG00000148841) #10	GSTO2 (ENSG00000065621) #11	GSTO1 (ENSG00000148834) #12	CFAP43 (ENSG00000197748) #13	SFR1 (ENSG00000156384) #14	COL17A1 (ENSG00000065618) #15	SLK (ENSG00000065613) #16	STN1 (ENSG00000107960) #17	SH3PXD2A (ENSG00000107957) #18	NEURL1 (ENSG00000107954) #19	CALHM3 (ENSG00000183128) #20	CALHM1 (ENSG00000185933) #21	CALHM2 (ENSG00000138172) #22	PDCD11 (ENSG00000148843) #23	ATP5MK (ENSG00000173915) #24	TAF5 (ENSG00000148835) #25	PCGF6 (ENSG00000156374) #26	INA (ENSG00000148798) #27	RPEL1 (ENSG00000235376) #28	NT5C2 (ENSG00000076685) #29	CNNM2 (ENSG00000148842) #30	AS3MT (ENSG00000214435) #31	BORCS7 (ENSG00000166275) #32	CYP17A1 (ENSG00000148795) #33	WBP1L (ENSG00000166272) #34	SFXN2 (ENSG00000156398) #35	ARL3 (ENSG00000138175) #36
Gorilla	MODERN SPECIES	1	ENSGGOG00000027830	SORCS3 (ENSGGOG00000034886) #8	CFAP58 (ENSGGOG00000010254) #9	ITPRIP (ENSGGOG00000036641) #10	ENSGGOG00000042801	GSTO2 (ENSGGOG00000000637) #11	GSTO1 (ENSGGOG00000005064) #12	CFAP43 (ENSGGOG00000000899) #13	SFR1 (ENSGGOG00000025713) #14	COL17A1 (ENSGGOG00000000510) #15	SLK (ENSGGOG00000026079) #16	STN1 (ENSGGOG00000008979) #17	SH3PXD2A (ENSGGOG00000037810) #18	NEURL1 (ENSGGOG00000011670) #19	CALHM3 (ENSGGOG00000011662) #20	CALHM1 (ENSGGOG00000011656) #21	CALHM2 (ENSGGOG00000011652) #22	PDCD11 (ENSGGOG00000011621) #23	ENSGGOG00000037876 #24	ENSGGOG00000011616 #24	ENSGGOG00000005443 #25	ENSGGOG00000014657 #26	INA (ENSGGOG00000002914) #27	ENSGGOG00000023942 ##28	ENSGGOG00000037824 ##28	NT5C2 (ENSGGOG00000013257) #29	CNNM2 (ENSGGOG00000013254) #30	ENSGGOG00000016551 #31	BORCS7 (ENSGGOG00000027277) #32	CYP17A1 (ENSGGOG00000012438) #33	WBP1L (ENSGGOG00000006632) #34
Orangutan	MODERN SPECIES	1	ENSPPYG00000035893	SORCS1 (ENSPPYG00000002638) #7	SORCS3 (ENSPPYG00000002637) #8	CFAP58 (ENSPPYG00000002636) #9	ITPRIP (ENSPPYG00000002635) #10	ENSPPYG00000033066 #11	GSTO1 (ENSPPYG00000002634) #12	CFAP43 (ENSPPYG00000002632) #13	SFR1 (ENSPPYG00000002631) #14	COL17A1 (ENSPPYG00000002630) #15	SLK (ENSPPYG00000002629) #16	STN1 (ENSPPYG00000002628) #17	SH3PXD2A (ENSPPYG00000002627) #18	NEURL1 (ENSPPYG00000002626) #19	ENSPPYG00000002625 #20	CALHM1 (ENSPPYG00000002624) #21	CALHM2 (ENSPPYG00000002623) #22	PDCD11 (ENSPPYG00000002621) #23	ENSPPYG00000002620 #24	TAF5 (ENSPPYG00000002619) #25	PCGF6 (ENSPPYG00000002618) #26	ENSPPYG00000040925	INA (ENSPPYG00000002617) #27	ENSPPYG00000031986 ##28	ENSPPYG00000007794	NT5C2 (ENSPPYG00000002616) #29	CNNM2 (ENSPPYG00000002615) #30	AS3MT (ENSPPYG00000002614) #31	BORCS7 (ENSPPYG00000002613) #32	CYP17A1 (ENSPPYG00000002611) #33	ENSPPYG00000041191
Gibbon	MODERN SPECIES	18	SORCS3 (ENSNLEG00000015381) #8	ENSNLEG00000018193	CFAP58 (ENSNLEG00000015366) #9	ITPRIP (ENSNLEG00000026941) #10	ENSNLEG00000015364	GSTO2 (ENSNLEG00000031495) #11	GSTO1 (ENSNLEG00000015358) #12	CFAP43 (ENSNLEG00000015332) #13	SFR1 (ENSNLEG00000028704) #14	COL17A1 (ENSNLEG00000015299) #15	SLK (ENSNLEG00000015288) #16	STN1 (ENSNLEG00000015282) #17	SH3PXD2A (ENSNLEG00000015269) #18	NEURL1 (ENSNLEG00000015266) #19	ENSNLEG00000028327 #20	CALHM1 (ENSNLEG00000015263) #21	CALHM2 (ENSNLEG00000015261) #22	PDCD11 (ENSNLEG00000026700) #23	ATP5MK (ENSNLEG00000032755) #24	TAF5 (ENSNLEG00000015245) #25	ENSNLEG00000033689 #26	INA (ENSNLEG00000015236) #27	ENSNLEG00000032264	NT5C2 (ENSNLEG00000015225) #29	CNNM2 (ENSNLEG00000015219) #30	AS3MT (ENSNLEG00000015217) #31	BORCS7 (ENSNLEG00000028788) #32	CYP17A1 (ENSNLEG00000015210) #33	WBP1L (ENSNLEG00000033256) #34	SFXN2 (ENSNLEG00000033903) #35	ARL3 (ENSNLEG00000015183) #36
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943	ENSGT00940000154418.a.a.i.b #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943.a	ENSGT00940000154418.a.a.i.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Macaca	ANCESTRAL SPECIES	11	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943.a	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Macaca_a	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT01100000263539.b.a.a.a.a.b.b.a.a.a	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323	ENSGT00940000157919 #37
Rhesus	MODERN SPECIES	19	SORCS3 (ENSMMUG00000003610) #8	CFAP58 (ENSMMUG00000015339) #9	ITPRIP (ENSMMUG00000051949) #10	GSTO2 (ENSMMUG00000062166) #11	ENSMMUG00000057536	GSTO1 (ENSMMUG00000015334) #12	CFAP43 (ENSMMUG00000059603) #13	SFR1 (ENSMMUG00000044990) #14	COL17A1 (ENSMMUG00000015325) #15	SLK (ENSMMUG00000015324) #16	STN1 (ENSMMUG00000015323) #17	SH3PXD2A (ENSMMUG00000007067) #18	ENSMMUG00000058427	NEURL1 (ENSMMUG00000007064) #19	CALHM3 (ENSMMUG00000061162) #20	CALHM1 (ENSMMUG00000058129) #21	CALHM2 (ENSMMUG00000007061) #22	PDCD11 (ENSMMUG00000007058) #23	TAF5 (ENSMMUG00000011523) #25	PCGF6 (ENSMMUG00000008873) #26	INA (ENSMMUG00000008872) #27	NT5C2 (ENSMMUG00000003749) #29	CNNM2 (ENSMMUG00000003747) #30	AS3MT (ENSMMUG00000007662) #31	BORCS7 (ENSMMUG00000007660) #32	CYP17A1 (ENSMMUG00000017601) #33	SFXN2 (ENSMMUG00000052989) #34	ARL3 (ENSMMUG00000060039) #36	ENSMMUG00000047000	TRIM8 (ENSMMUG00000004394) #37	SUFU (ENSMMUG00000004396)
Crab-eating macaque	MODERN SPECIES	19	SORCS3 (ENSMFAG00000044111) #8	CFAP58 (ENSMFAG00000035977) #9	ITPRIP (ENSMFAG00000057374) #10	GSTO2 (ENSMFAG00000050681) #11	ENSMFAG00000061086	GSTO1 (ENSMFAG00000033599) #12	CFAP43 (ENSMFAG00000043638) #13	SFR1 (ENSMFAG00000033346) #14	COL17A1 (ENSMFAG00000038498) #15	SLK (ENSMFAG00000007328) #16	STN1 (ENSMFAG00000041817) #17	SH3PXD2A (ENSMFAG00000044985) #18	ENSMFAG00000030673	NEURL1 (ENSMFAG00000001140) #19	CALHM3 (ENSMFAG00000009610) #20	CALHM1 (ENSMFAG00000032380) #21	CALHM2 (ENSMFAG00000002974) #22	PDCD11 (ENSMFAG00000044058) #23	TAF5 (ENSMFAG00000031468) #25	PCGF6 (ENSMFAG00000001835) #26	INA (ENSMFAG00000040504) #27	NT5C2 (ENSMFAG00000035950) #29	AS3MT (ENSMFAG00000039839) #31	BORCS7 (ENSMFAG00000044610) #32	CYP17A1 (ENSMFAG00000002033) #33	WBP1L (ENSMFAG00000042677) #34	SFXN2 (ENSMFAG00000045149) #35	ARL3 (ENSMFAG00000057536) #36	TRIM8 (ENSMFAG00000046181) #37	SUFU (ENSMFAG00000038634)	ACTR1A (ENSMFAG00000041926)
Pig-tailed macaque	MODERN SPECIES	550	ENSMNEG00000035014	SORCS3 (ENSMNEG00000037703) #8	CFAP58 (ENSMNEG00000034236) #9	ENSMNEG00000026574	GSTO2 (ENSMNEG00000032666) #11	ENSMNEG00000031275 #12	CFAP43 (ENSMNEG00000041229) #13	SFR1 (ENSMNEG00000041579) #14	COL17A1 (ENSMNEG00000030047) #15	SLK (ENSMNEG00000032689) #16	STN1 (ENSMNEG00000031906) #17	SH3PXD2A (ENSMNEG00000031119) #18	ENSMNEG00000007571	NEURL1 (ENSMNEG00000037296) #19	CALHM3 (ENSMNEG00000028186) #20	CALHM1 (ENSMNEG00000030938) #21	CALHM2 (ENSMNEG00000011289) #22	PDCD11 (ENSMNEG00000040726) #23	ATP5MK (ENSMNEG00000035593) #24	TAF5 (ENSMNEG00000035603) #25	PCGF6 (ENSMNEG00000030820) #26	INA (ENSMNEG00000043059) #27	ENSMNEG00000027383	NT5C2 (ENSMNEG00000036765) #29	CNNM2 (ENSMNEG00000032018) #30	AS3MT (ENSMNEG00000036598) #31	BORCS7 (ENSMNEG00000037640) #32	CYP17A1 (ENSMNEG00000041088) #33	WBP1L (ENSMNEG00000017708) #34	SFXN2 (ENSMNEG00000032769) #35	ARL3 (ENSMNEG00000041783) #36
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Cercopithecinae_d	ANCESTRAL SPECIES	57	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Sooty mangabey	MODERN SPECIES	598	SORCS3 (ENSCATG00000030472) #8	CFAP58 (ENSCATG00000038482) #9	ENSCATG00000044126	ENSCATG00000038057	GSTO2 (ENSCATG00000033970) #11	GSTO1 (ENSCATG00000020176) #12	CFAP43 (ENSCATG00000030702) #13	SFR1 (ENSCATG00000029645) #14	COL17A1 (ENSCATG00000043526) #15	SLK (ENSCATG00000031756) #16	STN1 (ENSCATG00000043103) #17	SH3PXD2A (ENSCATG00000028223) #18	ENSCATG00000009792	NEURL1 (ENSCATG00000041066) #19	CALHM3 (ENSCATG00000034360) #20	CALHM1 (ENSCATG00000044820) #21	CALHM2 (ENSCATG00000041923) #22	PDCD11 (ENSCATG00000044331) #23	ATP5MK (ENSCATG00000039772) #24	TAF5 (ENSCATG00000038549) #25	PCGF6 (ENSCATG00000041896) #26	INA (ENSCATG00000038727) #27	NT5C2 (ENSCATG00000030773) #29	CNNM2 (ENSCATG00000041464) #30	AS3MT (ENSCATG00000037118) #31	BORCS7 (ENSCATG00000035080) #32	CYP17A1 (ENSCATG00000041371) #33	WBP1L (ENSCATG00000041061) #34	SFXN2 (ENSCATG00000035934) #35	ARL3 (ENSCATG00000019333) #36	TRIM8 (ENSCATG00000033750) #37
Drill	MODERN SPECIES	660	SORCS1 (ENSMLEG00000037576) #7	SORCS3 (ENSMLEG00000038863) #8	CFAP58 (ENSMLEG00000039227) #9	ENSMLEG00000039989	ENSMLEG00000019788	GSTO2 (ENSMLEG00000039283) #11	GSTO1 (ENSMLEG00000042764) #12	CFAP43 (ENSMLEG00000028785) #13	SFR1 (ENSMLEG00000043379) #14	COL17A1 (ENSMLEG00000020402) #15	SLK (ENSMLEG00000023706) #16	STN1 (ENSMLEG00000040619) #17	SH3PXD2A (ENSMLEG00000030170) #18	NEURL1 (ENSMLEG00000037258) #19	CALHM3 (ENSMLEG00000035391) #20	CALHM1 (ENSMLEG00000028793) #21	CALHM2 (ENSMLEG00000029707) #22	PDCD11 (ENSMLEG00000040978) #23	ATP5MK (ENSMLEG00000027736) #24	TAF5 (ENSMLEG00000029550) #25	PCGF6 (ENSMLEG00000038894) #26	ENSMLEG00000036796	NT5C2 (ENSMLEG00000040980) #29	ENSMLEG00000004885 #30	AS3MT (ENSMLEG00000029524) #31	BORCS7 (ENSMLEG00000031380) #32	CYP17A1 (ENSMLEG00000043505) #33	WBP1L (ENSMLEG00000039529) #34	SFXN2 (ENSMLEG00000028110) #35	ARL3 (ENSMLEG00000037047) #36	ENSMLEG00000021573
Olive baboon	MODERN SPECIES	2	SORCS3 (ENSPANG00000020877) #8	CFAP58 (ENSPANG00000020883) #9	ITPRIP (ENSPANG00000020881) #10	GSTO2 (ENSPANG00000020880) #11	ENSPANG00000020878 #12	CFAP43 (ENSPANG00000020924) #13	SFR1 (ENSPANG00000020932) #14	ENSPANG00000043305	COL17A1 (ENSPANG00000020929) #15	SLK (ENSPANG00000020927) #16	STN1 (ENSPANG00000020926) #17	SH3PXD2A (ENSPANG00000020925) #18	ENSPANG00000043974	NEURL1 (ENSPANG00000020952) #19	CALHM3 (ENSPANG00000051037) #20	CALHM1 (ENSPANG00000020961) #21	CALHM2 (ENSPANG00000048513) #22	PDCD11 (ENSPANG00000020959) #23	ENSPANG00000034679 #24	TAF5 (ENSPANG00000020958) #25	PCGF6 (ENSPANG00000020957) #26	INA (ENSPANG00000020956) #27	NT5C2 (ENSPANG00000020954) #29	CNNM2 (ENSPANG00000020976) #30	AS3MT (ENSPANG00000020981) #31	BORCS7 (ENSPANG00000020979) #32	CYP17A1 (ENSPANG00000020982) #33	WBP1L (ENSPANG00000051243) #34	SFXN2 (ENSPANG00000020991) #35	ARL3 (ENSPANG00000033639) #36	TRIM8 (ENSPANG00000020989) #37
Vervet Monkey	MODERN SPECIES	28	ENSCSAG00000018452	SORCS1 (ENSCSAG00000005204) #7	SORCS3 (ENSCSAG00000005234) #8	CFAP58 (ENSCSAG00000005244) #9	ITPRIP (ENSCSAG00000018451) #10	GSTO2 (ENSCSAG00000005247) #11	ENSCSAG00000005249 #12	CFAP43 (ENSCSAG00000005256) #13	SFR1 (ENSCSAG00000005258) #14	COL17A1 (ENSCSAG00000005300) #15	SLK (ENSCSAG00000005313) #16	STN1 (ENSCSAG00000005318) #17	SH3PXD2A (ENSCSAG00000005326) #18	NEURL1 (ENSCSAG00000005330) #19	CALHM3 (ENSCSAG00000005334) #20	CALHM1 (ENSCSAG00000005337) #21	CALHM2 (ENSCSAG00000005340) #22	PDCD11 (ENSCSAG00000005346) #23	ATP5MK (ENSCSAG00000005353) #24	TAF5 (ENSCSAG00000005356) #25	PCGF6 (ENSCSAG00000005362) #26	INA (ENSCSAG00000005368) #27	ENSCSAG00000005374	NT5C2 (ENSCSAG00000005380) #29	CNNM2 (ENSCSAG00000005384) #30	AS3MT (ENSCSAG00000005391) #31	BORCS7 (ENSCSAG00000005395) #32	CYP17A1 (ENSCSAG00000005397) #33	ENSCSAG00000005399 #34	SFXN2 (ENSCSAG00000005403) #35	ARL3 (ENSCSAG00000005408) #36
Rhinopithecus	ANCESTRAL SPECIES	11	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c.a #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.i.b #27	ENSGT00910000146943	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Black snub-nosed monkey	MODERN SPECIES	1538	SORCS1 (ENSRBIG00000041454) #7	ENSRBIG00000033505	SORCS3 (ENSRBIG00000033222) #8	CFAP58 (ENSRBIG00000041485) #9	GSTO2 (ENSRBIG00000040325) #11	ENSRBIG00000034994 #12	CFAP43 (ENSRBIG00000033041) #13	SFR1 (ENSRBIG00000043888) #14	COL17A1 (ENSRBIG00000018038) #15	SLK (ENSRBIG00000037221) #16	STN1 (ENSRBIG00000039819) #17	SH3PXD2A (ENSRBIG00000033834) #18	ENSRBIG00000044735	NEURL1 (ENSRBIG00000032145) #19	CALHM3 (ENSRBIG00000030795) #20	CALHM1 (ENSRBIG00000029567) #21	CALHM2 (ENSRBIG00000032217) #22	PDCD11 (ENSRBIG00000011889) #23	ENSRBIG00000030165 #24	TAF5 (ENSRBIG00000043209) #25	PCGF6 (ENSRBIG00000034630) #26	ENSRBIG00000042921 #27	NT5C2 (ENSRBIG00000044011) #29	CNNM2 (ENSRBIG00000037414) #30	AS3MT (ENSRBIG00000038013) #31	BORCS7 (ENSRBIG00000043045) #32	CYP17A1 (ENSRBIG00000041280) #33	WBP1L (ENSRBIG00000028283) #34	SFXN2 (ENSRBIG00000041623) #35	ARL3 (ENSRBIG00000031934) #36	TRIM8 (ENSRBIG00000032947) #37
Golden snub-nosed monkey	MODERN SPECIES	3053					CFAP58 (ENSRROG00000044074) #9	GSTO2 (ENSRROG00000036386) #11	ENSRROG00000031846 #12	CFAP43 (ENSRROG00000032126) #13	SFR1 (ENSRROG00000024116) #14	COL17A1 (ENSRROG00000031066) #15	SLK (ENSRROG00000039991) #16	STN1 (ENSRROG00000013903) #17	SH3PXD2A (ENSRROG00000044760) #18	NEURL1 (ENSRROG00000042825) #19	CALHM3 (ENSRROG00000010205) #20	CALHM1 (ENSRROG00000011380) #21	CALHM2 (ENSRROG00000039430) #22	PDCD11 (ENSRROG00000030483) #23	ENSRROG00000043783 #24	TAF5 (ENSRROG00000040494) #25	PCGF6 (ENSRROG00000030643) #26	ENSRROG00000027343	INA (ENSRROG00000044855) #27	NT5C2 (ENSRROG00000040128) #29	CNNM2 (ENSRROG00000041690) #30	AS3MT (ENSRROG00000030773) #31	BORCS7 (ENSRROG00000030916) #32	CYP17A1 (ENSRROG00000039877) #33	WBP1L (ENSRROG00000035869) #34	SFXN2 (ENSRROG00000028643) #35	ARL3 (ENSRROG00000030757) #36
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00910000146943.c	ENSGT00940000154418.a.a.h.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Marmoset	MODERN SPECIES	3	SORCS3 (ENSCJAG00000018513) #8	CFAP58 (ENSCJAG00000018501) #9	ITPRIP (ENSCJAG00000018498) #10	GSTO2 (ENSCJAG00000018486) #11	ENSCJAG00000018474 #12	CFAP43 (ENSCJAG00000018443) #13	SFR1 (ENSCJAG00000018436) #14	ENSCJAG00000079409	COL17A1 (ENSCJAG00000018404) #15	SLK (ENSCJAG00000018363) #16	ENSCJAG00000076134	STN1 (ENSCJAG00000040388) #17	SH3PXD2A (ENSCJAG00000018307) #18	NEURL1 (ENSCJAG00000047912) #19	CALHM3 (ENSCJAG00000018295) #20	CALHM1 (ENSCJAG00000018294) #21	CALHM2 (ENSCJAG00000018290) #22	PDCD11 (ENSCJAG00000018257) #23	ENSCJAG00000018253 #24	TAF5 (ENSCJAG00000018213) #25	INA (ENSCJAG00000018178) #27	PCGF6 (ENSCJAG00000018192) #26	NT5C2 (ENSCJAG00000018148) #29	CNNM2 (ENSCJAG00000018118) #30	BORCS7 (ENSCJAG00000039007) #32	CYP17A1 (ENSCJAG00000018089) #33	WBP1L (ENSCJAG00000046138) #34	SFXN2 (ENSCJAG00000018068) #35	ARL3 (ENSCJAG00000040244) #36	TRIM8 (ENSCJAG00000018057) #37	ENSCJAG00000078286
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Bolivian squirrel monkey	MODERN SPECIES	47	XPNPEP1 (ENSSBOG00000025876)	ENSSBOG00000029669	SORCS1 (ENSSBOG00000030010) #7	SORCS3 (ENSSBOG00000014957) #8	CFAP58 (ENSSBOG00000020254) #9	ITPRIP (ENSSBOG00000012140) #10	GSTO2 (ENSSBOG00000034665) #11	GSTO1 (ENSSBOG00000020871) #12	CFAP43 (ENSSBOG00000027311) #13	COL17A1 (ENSSBOG00000032158) #15	SLK (ENSSBOG00000027292) #16	STN1 (ENSSBOG00000031516) #17	SH3PXD2A (ENSSBOG00000028219) #18	NEURL1 (ENSSBOG00000028649) #19	CALHM3 (ENSSBOG00000024427) #20	CALHM1 (ENSSBOG00000027301) #21	CALHM2 (ENSSBOG00000030532) #22	PDCD11 (ENSSBOG00000030308) #23	ATP5MK (ENSSBOG00000030019) #24	TAF5 (ENSSBOG00000020350) #25	PCGF6 (ENSSBOG00000021501) #26	INA (ENSSBOG00000020360) #27	NT5C2 (ENSSBOG00000020827) #29	CNNM2 (ENSSBOG00000030131) #30	ENSSBOG00000031782	AS3MT (ENSSBOG00000033111) #31	BORCS7 (ENSSBOG00000031523) #32	CYP17A1 (ENSSBOG00000020558) #33	WBP1L (ENSSBOG00000009511) #34	SFXN2 (ENSSBOG00000026232) #35	ARL3 (ENSSBOG00000030806) #36
Capuchin	MODERN SPECIES	71											SLK (ENSCCAG00000000586) #16	STN1 (ENSCCAG00000020507) #17	SH3PXD2A (ENSCCAG00000028177) #18	NEURL1 (ENSCCAG00000029247) #19	CALHM3 (ENSCCAG00000034201) #20	CALHM1 (ENSCCAG00000011595) #21	CALHM2 (ENSCCAG00000023950) #22	PDCD11 (ENSCCAG00000018950) #23	ENSCCAG00000019694 #24	TAF5 (ENSCCAG00000025917) #25	PCGF6 (ENSCCAG00000037838) #26	ENSCCAG00000026135	INA (ENSCCAG00000022073) #27	ENSCCAG00000032845	NT5C2 (ENSCCAG00000026539) #29	CNNM2 (ENSCCAG00000023803) #30	AS3MT (ENSCCAG00000020106) #31	BORCS7 (ENSCCAG00000033857) #32	ENSCCAG00000035022	CYP17A1 (ENSCCAG00000022170) #33	WBP1L (ENSCCAG00000001078) #34
Mas night monkey	MODERN SPECIES	658	ENSANAG00000035279	ITPRIP (ENSANAG00000034870) #10	GSTO2 (ENSANAG00000034517) #11	GSTO1 (ENSANAG00000033006) #12	CFAP43 (ENSANAG00000032094) #13	SFR1 (ENSANAG00000031275) #14	ENSANAG00000030939	COL17A1 (ENSANAG00000027237) #15	ENSANAG00000026163	SLK (ENSANAG00000020590) #16	ENSANAG00000038444	STN1 (ENSANAG00000038147) #17	SH3PXD2A (ENSANAG00000037670) #18	NEURL1 (ENSANAG00000037067) #19	CALHM3 (ENSANAG00000032187) #20	CALHM1 (ENSANAG00000032120) #21	CALHM2 (ENSANAG00000027035) #22	PDCD11 (ENSANAG00000034576) #23	ATP5MK (ENSANAG00000033958) #24	TAF5 (ENSANAG00000033631) #25	PCGF6 (ENSANAG00000028199) #26	ENSANAG00000027437	ENSANAG00000027873 #27	NT5C2 (ENSANAG00000024718) #29	CNNM2 (ENSANAG00000020034) #30	AS3MT (ENSANAG00000038067) #31	ENSANAG00000037880 #32	CYP17A1 (ENSANAG00000022241) #33	WBP1L (ENSANAG00000034043) #34	SFXN2 (ENSANAG00000031917) #35	ARL3 (ENSANAG00000027007) #36
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Bushbaby	MODERN SPECIES	136	ENSOGAG00000030478	SORCS1 (ENSOGAG00000007257) #7	SORCS3 (ENSOGAG00000016699) #8	CFAP58 (ENSOGAG00000016440) #9	ITPRIP (ENSOGAG00000028677) #10	GSTO2 (ENSOGAG00000016437) #11	GSTO1 (ENSOGAG00000016045) #12	CFAP43 (ENSOGAG00000017132) #13	COL17A1 (ENSOGAG00000017124) #15	SLK (ENSOGAG00000017119) #16	STN1 (ENSOGAG00000008722) #17	SH3PXD2A (ENSOGAG00000008718) #18	NEURL1 (ENSOGAG00000008711) #19	ENSOGAG00000025475	CALHM3 (ENSOGAG00000008708) #20	CALHM1 (ENSOGAG00000032146) #21	CALHM2 (ENSOGAG00000008704) #22	PDCD11 (ENSOGAG00000008683) #23	TAF5 (ENSOGAG00000008680) #25	PCGF6 (ENSOGAG00000017097) #26	INA (ENSOGAG00000029454) #27	ENSOGAG00000004346	CNNM2 (ENSOGAG00000004343) #30	AS3MT (ENSOGAG00000004341) #31	BORCS7 (ENSOGAG00000032692) #32	CYP17A1 (ENSOGAG00000013530) #33	WBP1L (ENSOGAG00000003309) #34	SFXN2 (ENSOGAG00000003633) #35	ARL3 (ENSOGAG00000003631) #36	TRIM8 (ENSOGAG00000003628) #37	SUFU (ENSOGAG00000004840)
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849.c #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Lemuriformes_a	ANCESTRAL SPECIES	21		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849.c #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Greater bamboo lemur	MODERN SPECIES	194	SORCS1 (ENSPSMG00000013052) #7	ENSPSMG00000013000	SORCS3 (ENSPSMG00000012981) #8	CFAP58 (ENSPSMG00000012943) #9	ITPRIP (ENSPSMG00000012904) #10	GSTO2 (ENSPSMG00000012899) #11	GSTO1 (ENSPSMG00000012842) #12	CFAP43 (ENSPSMG00000012803) #13	SFR1 (ENSPSMG00000012770) #14	COL17A1 (ENSPSMG00000012758) #15	SLK (ENSPSMG00000012717) #16	STN1 (ENSPSMG00000012647) #17	SH3PXD2A (ENSPSMG00000012614) #18	NEURL1 (ENSPSMG00000012575) #19	CALHM3 (ENSPSMG00000012562) #20	CALHM1 (ENSPSMG00000012549) #21	CALHM2 (ENSPSMG00000012544) #22	PDCD11 (ENSPSMG00000012508) #23	ATP5MK (ENSPSMG00000012393) #24	TAF5 (ENSPSMG00000012382) #25	PCGF6 (ENSPSMG00000012356) #26	INA (ENSPSMG00000012332) #27	ENSPSMG00000012304	ENSPSMG00000012219	CNNM2 (ENSPSMG00000012210) #30	AS3MT (ENSPSMG00000012188) #31	BORCS7 (ENSPSMG00000012149) #32	CYP17A1 (ENSPSMG00000012142) #33	WBP1L (ENSPSMG00000012116) #34	SFXN2 (ENSPSMG00000012074) #35	ARL3 (ENSPSMG00000012052) #36
Coquerels sifaka	MODERN SPECIES	870				SORCS1 (ENSPCOG00000024071) #7	SORCS3 (ENSPCOG00000019728) #8	CFAP58 (ENSPCOG00000014925) #9	GSTO2 (ENSPCOG00000014365) #11	CFAP43 (ENSPCOG00000023452) #13	SFR1 (ENSPCOG00000024305) #14	COL17A1 (ENSPCOG00000016202) #15	SLK (ENSPCOG00000016155) #16	STN1 (ENSPCOG00000017648) #17	SH3PXD2A (ENSPCOG00000015981) #18	NEURL1 (ENSPCOG00000015128) #19	CALHM3 (ENSPCOG00000025456) #20	CALHM1 (ENSPCOG00000015513) #21	CALHM2 (ENSPCOG00000017708) #22	PDCD11 (ENSPCOG00000023327) #23	ATP5MK (ENSPCOG00000023807) #24	TAF5 (ENSPCOG00000002819) #25	PCGF6 (ENSPCOG00000027010) #26	INA (ENSPCOG00000028040) #27	NT5C2 (ENSPCOG00000015418) #29	CNNM2 (ENSPCOG00000017458) #30	AS3MT (ENSPCOG00000019900) #31	ENSPCOG00000014724 #32	CYP17A1 (ENSPCOG00000003691) #33	WBP1L (ENSPCOG00000020010) #34	SFXN2 (ENSPCOG00000024349) #35	ARL3 (ENSPCOG00000024271) #36	TRIM8 (ENSPCOG00000001337) #37
Mouse lemur	MODERN SPECIES	6	ADD3 (ENSMICG00000006859)	XPNPEP1 (ENSMICG00000006830)	SORCS1 (ENSMICG00000007006) #7	SORCS3 (ENSMICG00000016273) #8	CFAP58 (ENSMICG00000016245) #9	GSTO2 (ENSMICG00000016220) #11	GSTO1 (ENSMICG00000026906) #12	CFAP43 (ENSMICG00000004417) #13	SFR1 (ENSMICG00000037306) #14	COL17A1 (ENSMICG00000004394) #15	SLK (ENSMICG00000004384) #16	STN1 (ENSMICG00000012547) #17	SH3PXD2A (ENSMICG00000012520) #18	NEURL1 (ENSMICG00000012507) #19	CALHM3 (ENSMICG00000041906) #20	CALHM1 (ENSMICG00000027967) #21	CALHM2 (ENSMICG00000012493) #22	PDCD11 (ENSMICG00000012421) #23	ATP5MK (ENSMICG00000012417) #24	TAF5 (ENSMICG00000012393) #25	PCGF6 (ENSMICG00000034497) #26	INA (ENSMICG00000000504) #27	ENSMICG00000012316 #29	CNNM2 (ENSMICG00000012298) #30	AS3MT (ENSMICG00000012292) #31	ENSMICG00000047930 #32	CYP17A1 (ENSMICG00000012275) #33	WBP1L (ENSMICG00000012267) #34	SFXN2 (ENSMICG00000012256) #35	ARL3 (ENSMICG00000012249) #36	TRIM8 (ENSMICG00000031109) #37
Marsupialia	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Opossum	MODERN SPECIES		SORCS1 (ENSMODG00000010737) #7	ENSMODG00000038934	SORCS3 (ENSMODG00000010798) #8	CFAP58 (ENSMODG00000010828) #9	ITPRIP (ENSMODG00000024804) #10	ENSMODG00000010839 #12	ENSMODG00000010896 #13	ENSMODG00000010902 #14	ENSMODG00000045729 #12	ENSMODG00000010881 #13	ENSMODG00000010961	SLK (ENSMODG00000010985) #16	SH3PXD2A (ENSMODG00000011016) #18	NEURL1 (ENSMODG00000011020) #19	CALHM3 (ENSMODG00000011027) #20	CALHM1 (ENSMODG00000011033) #21	ENSMODG00000038510	CALHM2 (ENSMODG00000011040) #22	PDCD11 (ENSMODG00000011077) #23	ATP5MK (ENSMODG00000025729) #24	TAF5 (ENSMODG00000011095) #25	PCGF6 (ENSMODG00000011120) #26	INA (ENSMODG00000011125) #27	ENSMODG00000011153	CNNM2 (ENSMODG00000011165) #30	BORCS7 (ENSMODG00000039361) #32	ENSMODG00000011205 #33	WBP1L (ENSMODG00000044404) #34	SFXN2 (ENSMODG00000011216) #35	ENSMODG00000011224 #36	TRIM8 (ENSMODG00000011232) #37
Marsupialia_b	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r.a #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000156478.k.b	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.cc #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
koala	MODERN SPECIES	6															CALHM3 (ENSPCIG00000024475) #20	CALHM1 (ENSPCIG00000001165) #21	CALHM2 (ENSPCIG00000036143) #22	PDCD11 (ENSPCIG00000001118) #23	ENSPCIG00000001100 #24	TAF5 (ENSPCIG00000001090) #25	PCGF6 (ENSPCIG00000028313) #26	INA (ENSPCIG00000028312) #27	ENSPCIG00000028855	CNNM2 (ENSPCIG00000028980) #30	BORCS7 (ENSPCIG00000018033) #32	ENSPCIG00000018032 #33	WBP1L (ENSPCIG00000018031) #34	ARL3 (ENSPCIG00000028982) #36	TRIM8 (ENSPCIG00000028984) #37	SUFU (ENSPCIG00000028985)	ACTR1A (ENSPCIG00000028989)
Common wonbat	MODERN SPECIES	581	SORCS3 (ENSVURG00010025053) #8	CFAP58 (ENSVURG00010025055) #9	ITPRIP (ENSVURG00010025056) #10	ENSVURG00010025057 #12	ENSVURG00010025058 #13	ENSVURG00010025059 #14	ENSVURG00010025060 #12	ENSVURG00010000168 #13	ENSVURG00010000325	ENSVURG00010000337	SLK (ENSVURG00010000384) #16	STN1 (ENSVURG00010000526) #17	SH3PXD2A (ENSVURG00010000566) #18	NEURL1 (ENSVURG00010000653) #19	CALHM3 (ENSVURG00010000669) #20	CALHM1 (ENSVURG00010000699) #21	CALHM2 (ENSVURG00010000704) #22	PDCD11 (ENSVURG00010000713) #23	ENSVURG00010000772 #24	TAF5 (ENSVURG00010000796) #25	PCGF6 (ENSVURG00010000868) #26	INA (ENSVURG00010000939) #27	ENSVURG00010000957	CNNM2 (ENSVURG00010001013) #30	BORCS7 (ENSVURG00010001049) #32	CYP17A1 (ENSVURG00010001081) #33	WBP1L (ENSVURG00010001384) #34	SFXN2 (ENSVURG00010001410) #35	ARL3 (ENSVURG00010001426) #36	TRIM8 (ENSVURG00010001450) #37	SUFU (ENSVURG00010001480)
Wallaby	MODERN SPECIES	9238															CALHM3 (ENSMEUG00000016476) #20	CALHM1 (ENSMEUG00000016467) #21
Tasmanian devil	MODERN SPECIES	1	SORCS1 (ENSSHAG00000018571) #7	SORCS3 (ENSSHAG00000012191) #8	CFAP58 (ENSSHAG00000016014) #9	ITPRIP (ENSSHAG00000022665) #10	ENSSHAG00000016340 #12	ENSSHAG00000016427 #13	ENSSHAG00000027679 #14	ENSSHAG00000016910 #13	ENSSHAG00000022398 #12	ENSSHAG00000017266	ENSSHAG00000017376 #16	STN1 (ENSSHAG00000017550) #17	SH3PXD2A (ENSSHAG00000017659) #18	NEURL1 (ENSSHAG00000018064) #19	CALHM3 (ENSSHAG00000018221) #20	CALHM1 (ENSSHAG00000025980) #21	CALHM2 (ENSSHAG00000022456) #22	PDCD11 (ENSSHAG00000018258) #23	ENSSHAG00000018296 #25	PCGF6 (ENSSHAG00000023796) #26	INA (ENSSHAG00000018358) #27	ENSSHAG00000018477	CNNM2 (ENSSHAG00000018509) #30	CYP17A1 (ENSSHAG00000018660) #33	BORCS7 (ENSSHAG00000018650) #32	WBP1L (ENSSHAG00000018684) #34	ENSSHAG00000018726 #35	ARL3 (ENSSHAG00000018738) #36	TRIM8 (ENSSHAG00000031236) #37	SUFU (ENSSHAG00000018777)	ACTR1A (ENSSHAG00000018823)
Platypus	MODERN SPECIES	7	ADD3 (ENSOANG00000001601)	XPNPEP1 (ENSOANG00000001602)	SORCS1 (ENSOANG00000001604) #7	SORCS3 (ENSOANG00000001606) #8	CFAP58 (ENSOANG00000001608) #9	ITPRIP (ENSOANG00000001611) #10	GSTO1 (ENSOANG00000049378) #12	CFAP43 (ENSOANG00000001619) #13	ENSOANG00000048592 #14	ENSOANG00000001623	SLK (ENSOANG00000010956) #16	STN1 (ENSOANG00000041497) #17	SH3PXD2A (ENSOANG00000001630) #18	NEURL1 (ENSOANG00000001631) #19	CALHM3 (ENSOANG00000001633) #20	CALHM1 (ENSOANG00000001634) #21	CALHM2 (ENSOANG00000043354) #22	PDCD11 (ENSOANG00000001636) #23	ATP5MK (ENSOANG00000020153) #24	TAF5 (ENSOANG00000001637) #25	PCGF6 (ENSOANG00000001639) #26	ENSOANG00000001640	CNNM2 (ENSOANG00000001643) #30	ENSOANG00000001644 #31	ENSOANG00000051063	BORCS7 (ENSOANG00000001647) #32	CYP17A1 (ENSOANG00000040450) #33	WBP1L (ENSOANG00000001648) #34	SFXN2 (ENSOANG00000001649) #35	ARL3 (ENSOANG00000001653) #36	TRIM8 (ENSOANG00000001654) #37
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00940000155588.b.u #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Elapidae	ANCESTRAL SPECIES	4	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.p #12	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00940000155588.b.u #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Elapidae_a	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.p #12	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Eastern brown snake	MODERN SPECIES	25	SORCS1 (ENSPTXG00000002991) #7	SORCS3 (ENSPTXG00000001273) #8	ENSPTXG00000001203	ENSPTXG00000001198 #9	ITPRIP (ENSPTXG00000001196) #10	GSTO1 (ENSPTXG00000001192) #12	ENSPTXG00000001183 #13	ENSPTXG00000001172 #13	SFR1 (ENSPTXG00000001166) #14	ENSPTXG00000001161	SLK (ENSPTXG00000001147) #16	STN1 (ENSPTXG00000001053) #17	SH3PXD2A (ENSPTXG00000001038) #18	NEURL1 (ENSPTXG00000001034) #19	CALHM3 (ENSPTXG00000001030) #20	CALHM1 (ENSPTXG00000001028) #21	CALHM2 (ENSPTXG00000001025) #22	PDCD11 (ENSPTXG00000000924) #23	ENSPTXG00000000883	TAF5 (ENSPTXG00000000881) #25	PCGF6 (ENSPTXG00000000878) #26	INA (ENSPTXG00000000859) #27	ENSPTXG00000000856	CNNM2 (ENSPTXG00000000855) #30	BORCS7 (ENSPTXG00000000854) #32	CYP17A1 (ENSPTXG00000000602) #33	WBP1L (ENSPTXG00000000567) #34	SFXN2 (ENSPTXG00000000558) #35	ARL3 (ENSPTXG00000000545) #36	TRIM8 (ENSPTXG00000000536) #37	SUFU (ENSPTXG00000000522)
Mainland tiger snake	MODERN SPECIES		ADD3 (ENSNSUG00000003902)	XPNPEP1 (ENSNSUG00000004851)	SORCS1 (ENSNSUG00000005013) #7	SORCS3 (ENSNSUG00000005046) #8	ENSNSUG00000005077	ITPRIP (ENSNSUG00000005078) #10	GSTO1 (ENSNSUG00000005079) #12	ENSNSUG00000005146 #13	SFR1 (ENSNSUG00000005147) #14	ENSNSUG00000005149	SLK (ENSNSUG00000005155) #16	STN1 (ENSNSUG00000005927) #17	SH3PXD2A (ENSNSUG00000006039) #18	NEURL1 (ENSNSUG00000006040) #19	CALHM3 (ENSNSUG00000006054) #20	CALHM1 (ENSNSUG00000006055) #21	CALHM2 (ENSNSUG00000006056) #22	PDCD11 (ENSNSUG00000006057) #23	ENSNSUG00000006296	TAF5 (ENSNSUG00000006297) #25	ENSNSUG00000006298 #26	ENSNSUG00000006299 #26	INA (ENSNSUG00000006300) #27	ENSNSUG00000006332	CNNM2 (ENSNSUG00000006339) #30	BORCS7 (ENSNSUG00000006370) #32	CYP17A1 (ENSNSUG00000006374) #33	WBP1L (ENSNSUG00000006455) #34	SFXN2 (ENSNSUG00000006456) #35	ARL3 (ENSNSUG00000006546) #36	TRIM8 (ENSNSUG00000006547) #37
Blue-lipped sea krait	MODERN SPECIES	5892															CALHM3 (ENSLLTG00000006528) #20	CALHM1 (ENSLLTG00000006541) #21
Indian cobra	MODERN SPECIES	3	XPNPEP1 (ENSNNAG00000010320)	SORCS1 (ENSNNAG00000011948) #7	SORCS3 (ENSNNAG00000013056) #8	CFAP58 (ENSNNAG00000013309) #9	ITPRIP (ENSNNAG00000013441) #10	ENSNNAG00000013459 #12	ENSNNAG00000013626 #12	CFAP43 (ENSNNAG00000013647) #13	SFR1 (ENSNNAG00000013731) #14	ENSNNAG00000013739	SLK (ENSNNAG00000013794) #16	STN1 (ENSNNAG00000013991) #17	SH3PXD2A (ENSNNAG00000014011) #18	NEURL1 (ENSNNAG00000014090) #19	CALHM3 (ENSNNAG00000014121) #20	CALHM1 (ENSNNAG00000014135) #21	CALHM2 (ENSNNAG00000014158) #22	PDCD11 (ENSNNAG00000014210) #23	ENSNNAG00000014447	TAF5 (ENSNNAG00000014456) #25	PCGF6 (ENSNNAG00000014483) #26	INA (ENSNNAG00000014506) #27	ENSNNAG00000014527	CNNM2 (ENSNNAG00000014688) #30	BORCS7 (ENSNNAG00000014735) #32	ENSNNAG00000014755 #33	ENSNNAG00000014782 #33	WBP1L (ENSNNAG00000014802) #34	SFXN2 (ENSNNAG00000014833) #35	ARL3 (ENSNNAG00000014865) #36	TRIM8 (ENSNNAG00000014881) #37
Lizard	MODERN SPECIES	2	ENSACAG00000045516	SORCS1 (ENSACAG00000006446) #7	ENSACAG00000037409	SORCS3 (ENSACAG00000005234) #8	CFAP58 (ENSACAG00000005225) #9	ITPRIP (ENSACAG00000005224) #10	ENSACAG00000005210 #12	CFAP43 (ENSACAG00000005165) #13	SFR1 (ENSACAG00000037852) #14	ENSACAG00000005136	SLK (ENSACAG00000004988) #16	STN1 (ENSACAG00000004954) #17	SH3PXD2A (ENSACAG00000004932) #18	NEURL1 (ENSACAG00000004920) #19	CALHM3 (ENSACAG00000004919) #20	CALHM1 (ENSACAG00000008401) #21	CALHM2 (ENSACAG00000004916) #22	PDCD11 (ENSACAG00000004796) #23	ENSACAG00000044621	TAF5 (ENSACAG00000004756) #25	PCGF6 (ENSACAG00000029126) #26	ENSACAG00000004712 #27	ENSACAG00000004601	ENSACAG00000042108	CNNM2 (ENSACAG00000004555) #30	AS3MT (ENSACAG00000029427) #31	BORCS7 (ENSACAG00000042978) #32	ENSACAG00000043026 #33	ENSACAG00000004350 #33	WBP1L (ENSACAG00000040095) #34	SFXN2 (ENSACAG00000004270) #35
Laterata	ANCESTRAL SPECIES		ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37	ENSGT00390000009747
Common wall lizard	MODERN SPECIES	13	ENSPMRG00000003609	CFAP58 (ENSPMRG00000003628) #9	ITPRIP (ENSPMRG00000003681) #10	GSTO1 (ENSPMRG00000003685) #12	CFAP43 (ENSPMRG00000003694) #13	SFR1 (ENSPMRG00000003720) #14	ENSPMRG00000003723	ENSPMRG00000003725	ENSPMRG00000003729	SLK (ENSPMRG00000003737) #16	STN1 (ENSPMRG00000003752) #17	SH3PXD2A (ENSPMRG00000003762) #18	ENSPMRG00000003770 #19	NEURL1 (ENSPMRG00000003774) #19	CALHM3 (ENSPMRG00000003782) #20	CALHM1 (ENSPMRG00000003784) #21	CALHM2 (ENSPMRG00000003787) #22	PDCD11 (ENSPMRG00000003794) #23	ENSPMRG00000003807	TAF5 (ENSPMRG00000003816) #25	PCGF6 (ENSPMRG00000003838) #26	INA (ENSPMRG00000003841) #27	ENSPMRG00000003857	CNNM2 (ENSPMRG00000003889) #30	AS3MT (ENSPMRG00000003894) #31	CYP17A1 (ENSPMRG00000003910) #33	WBP1L (ENSPMRG00000003937) #34	SFXN2 (ENSPMRG00000003945) #35	ARL3 (ENSPMRG00000003951) #36	TRIM8 (ENSPMRG00000003954) #37	ENSPMRG00000003961
Argentine black and white tegu	MODERN SPECIES	48	XPNPEP1 (ENSSMRG00000009070)	ENSSMRG00000009049	ENSSMRG00000008972	SORCS1 (ENSSMRG00000007831) #7	ENSSMRG00000007793 #8	CFAP58 (ENSSMRG00000007769) #9	GSTO1 (ENSSMRG00000007742) #12	CFAP43 (ENSSMRG00000007729) #13	SFR1 (ENSSMRG00000007728) #14	COL17A1 (ENSSMRG00000007725) #15	SLK (ENSSMRG00000007721) #16	STN1 (ENSSMRG00000007719) #17	SH3PXD2A (ENSSMRG00000007713) #18	NEURL1 (ENSSMRG00000007702) #19	CALHM3 (ENSSMRG00000007700) #20	CALHM1 (ENSSMRG00000007696) #21	CALHM2 (ENSSMRG00000007689) #22	PDCD11 (ENSSMRG00000007373) #23	ENSSMRG00000007366	TAF5 (ENSSMRG00000007365) #25	PCGF6 (ENSSMRG00000007357) #26	INA (ENSSMRG00000007346) #27	ENSSMRG00000007327	CNNM2 (ENSSMRG00000007300) #30	AS3MT (ENSSMRG00000007298) #31	CYP17A1 (ENSSMRG00000007206) #33	BORCS7 (ENSSMRG00000007198) #32	WBP1L (ENSSMRG00000007196) #34	SFXN2 (ENSSMRG00000007184) #35	ARL3 (ENSSMRG00000007182) #36	TRIM8 (ENSSMRG00000007177) #37
tuatara	MODERN SPECIES	1056													SH3PXD2A (ENSSPUG00000010795) #18	NEURL1 (ENSSPUG00000010823) #19	CALHM3 (ENSSPUG00000010832) #20	CALHM1 (ENSSPUG00000010841) #21	CALHM2 (ENSSPUG00000010854) #22	ENSSPUG00000010908	PCGF6 (ENSSPUG00000010948) #26	INA (ENSSPUG00000010955) #27	ENSSPUG00000010969	CNNM2 (ENSSPUG00000011002) #30	AS3MT (ENSSPUG00000011056) #31	BORCS7 (ENSSPUG00000011069) #32	CYP17A1 (ENSSPUG00000011092) #33	WBP1L (ENSSPUG00000011131) #34	SFXN2 (ENSSPUG00000011143) #35	ARL3 (ENSSPUG00000011154) #36	TRIM8 (ENSSPUG00000011167) #37	SUFU (ENSSPUG00000011181)	ACTR1A (ENSSPUG00000011211)
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Three-toed box turtle	MODERN SPECIES	39	XPNPEP1 (ENSTMTG00000004946)	SORCS1 (ENSTMTG00000004623) #7	SORCS3 (ENSTMTG00000004223) #8	CFAP58 (ENSTMTG00000004140) #9	ITPRIP (ENSTMTG00000004126) #10	GSTO1 (ENSTMTG00000004095) #12	SFR1 (ENSTMTG00000004085) #14	ENSTMTG00000004055 #13	ENSTMTG00000003970 #13	ENSTMTG00000003930	SLK (ENSTMTG00000003888) #16	STN1 (ENSTMTG00000003849) #17	SH3PXD2A (ENSTMTG00000003816) #18	NEURL1 (ENSTMTG00000003710) #19	CALHM3 (ENSTMTG00000003689) #20	CALHM1 (ENSTMTG00000003677) #21	CALHM2 (ENSTMTG00000003669) #22	PDCD11 (ENSTMTG00000003588) #23	ENSTMTG00000003574	TAF5 (ENSTMTG00000003542) #25	ENSTMTG00000003510	PCGF6 (ENSTMTG00000003473) #26	INA (ENSTMTG00000003452) #27	ENSTMTG00000003377	CNNM2 (ENSTMTG00000003262) #30	AS3MT (ENSTMTG00000003237) #31	BORCS7 (ENSTMTG00000003229) #32	CYP17A1 (ENSTMTG00000003197) #33	WBP1L (ENSTMTG00000003185) #34	SFXN2 (ENSTMTG00000003157) #35	ARL3 (ENSTMTG00000003142) #36
painted turtle	MODERN SPECIES	2388	C3orf62 (ENSCPBG00000024358)	ENSCPBG00000024360	ENSCPBG00000024362	SORCS3 (ENSCPBG00000024367) #8	CFAP58 (ENSCPBG00000024380) #9	ITPRIP (ENSCPBG00000024382) #10	GSTO1 (ENSCPBG00000024383) #12	CFAP43 (ENSCPBG00000024387) #13	SFR1 (ENSCPBG00000024393) #14	ENSCPBG00000024394	SLK (ENSCPBG00000024408) #16	STN1 (ENSCPBG00000024481) #17	SH3PXD2A (ENSCPBG00000024482) #18	NEURL1 (ENSCPBG00000024483) #19	CALHM3 (ENSCPBG00000024484) #20	CALHM1 (ENSCPBG00000024485) #21	CALHM2 (ENSCPBG00000024486) #22	PDCD11 (ENSCPBG00000024487) #23	ENSCPBG00000024490	TAF5 (ENSCPBG00000024491) #25	PCGF6 (ENSCPBG00000024492) #26	INA (ENSCPBG00000024493) #27	ENSCPBG00000024494	CNNM2 (ENSCPBG00000024495) #30	AS3MT (ENSCPBG00000024496) #31	BORCS7 (ENSCPBG00000024497) #32	CYP17A1 (ENSCPBG00000024499) #33	WBP1L (ENSCPBG00000024501) #34	SFXN2 (ENSCPBG00000002343) #35	ARL3 (ENSCPBG00000002364) #36	TRIM8 (ENSCPBG00000002376) #37
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Abingdon island giant tortoise	MODERN SPECIES	1141								ENSCABG00000012803	SFR1 (ENSCABG00000012800) #14	ENSCABG00000012797	SLK (ENSCABG00000012791) #16	STN1 (ENSCABG00000012694) #17	SH3PXD2A (ENSCABG00000012673) #18	NEURL1 (ENSCABG00000012663) #19	CALHM3 (ENSCABG00000012660) #20	CALHM1 (ENSCABG00000012656) #21	CALHM2 (ENSCABG00000012652) #22	PDCD11 (ENSCABG00000012639) #23	ENSCABG00000012631	TAF5 (ENSCABG00000012628) #25	PCGF6 (ENSCABG00000012625) #26	INA (ENSCABG00000012623) #27	ENSCABG00000012619	CNNM2 (ENSCABG00000012617) #30
Goode s thornscrub tortoise	MODERN SPECIES	21	XPNPEP1 (ENSGEVG00005013193)	SORCS1 (ENSGEVG00005011892) #7	SORCS3 (ENSGEVG00005011304) #8	ENSGEVG00005011234	CFAP58 (ENSGEVG00005011051) #9	ITPRIP (ENSGEVG00005011019) #10	GSTO1 (ENSGEVG00005010997) #12	CFAP43 (ENSGEVG00005010554) #13	SFR1 (ENSGEVG00005010464) #14	ENSGEVG00005010362	SLK (ENSGEVG00005010221) #16	STN1 (ENSGEVG00005010129) #17	SH3PXD2A (ENSGEVG00005009971) #18	NEURL1 (ENSGEVG00005009893) #19	CALHM3 (ENSGEVG00005009849) #20	CALHM1 (ENSGEVG00005009808) #21	CALHM2 (ENSGEVG00005009777) #22	PDCD11 (ENSGEVG00005009591) #23	ENSGEVG00005009520	TAF5 (ENSGEVG00005009475) #25	PCGF6 (ENSGEVG00005009433) #26	INA (ENSGEVG00005009390) #27	ENSGEVG00005009185	CNNM2 (ENSGEVG00005005911) #30	AS3MT (ENSGEVG00005005861) #31	BORCS7 (ENSGEVG00005005827) #32	CYP17A1 (ENSGEVG00005005795) #33	WBP1L (ENSGEVG00005005761) #34	SFXN2 (ENSGEVG00005005736) #35	ARL3 (ENSGEVG00005005712) #36	TRIM8 (ENSGEVG00005005694) #37
Chinese turtle	MODERN SPECIES	893													SH3PXD2A (ENSPSIG00000005648) #18	NEURL1 (ENSPSIG00000005417) #19	CALHM3 (ENSPSIG00000005389) #20	CALHM1 (ENSPSIG00000005362) #21	CALHM2 (ENSPSIG00000005351) #22	PDCD11 (ENSPSIG00000005102) #23	ENSPSIG00000005062	TAF5 (ENSPSIG00000004990) #25	ENSPSIG00000000552	PCGF6 (ENSPSIG00000004981) #26	ENSPSIG00000004644	ENSPSIG00000004641	CNNM2 (ENSPSIG00000004321) #30	AS3MT (ENSPSIG00000004098) #31	CYP17A1 (ENSPSIG00000003991) #33	WBP1L (ENSPSIG00000003977) #34	ARL3 (ENSPSIG00000003938) #36	SFXN2 (ENSPSIG00000003923) #35	TRIM8 (ENSPSIG00000003881) #37
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Australian saltwater crocodile	MODERN SPECIES	68	XPNPEP1 (ENSCPRG00005011419)	SORCS1 (ENSCPRG00005011482) #7	ENSCPRG00005011540	SORCS3 (ENSCPRG00005011631) #8	CFAP58 (ENSCPRG00005012375) #9	ITPRIP (ENSCPRG00005012384) #10	GSTO1 (ENSCPRG00005012391) #12	CFAP43 (ENSCPRG00005012405) #13	SFR1 (ENSCPRG00005012481) #14	ENSCPRG00005012489	SLK (ENSCPRG00005012498) #16	STN1 (ENSCPRG00005012508) #17	SH3PXD2A (ENSCPRG00005012523) #18	NEURL1 (ENSCPRG00005012544) #19	CALHM3 (ENSCPRG00005012558) #20	CALHM1 (ENSCPRG00005012562) #21	CALHM2 (ENSCPRG00005012571) #22	PDCD11 (ENSCPRG00005012589) #23	ENSCPRG00005012672	TAF5 (ENSCPRG00005012674) #25	PCGF6 (ENSCPRG00005012695) #26	ENSCPRG00005012714	CNNM2 (ENSCPRG00005012858) #30	ENSCPRG00005012869	AS3MT (ENSCPRG00005012880) #31	ENSCPRG00005012904	CYP17A1 (ENSCPRG00005012913) #33	WBP1L (ENSCPRG00005012923) #34	SFXN2 (ENSCPRG00005012928) #35	ARL3 (ENSCPRG00005012930) #36	TRIM8 (ENSCPRG00005012943) #37
Aves	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Flycatcher	MODERN SPECIES	25	ENSFALG00000002325 #7	ENSFALG00000028861 #7	ENSFALG00000024289	ENSFALG00000027115 #8	CFAP58 (ENSFALG00000008836) #9	ITPRIP (ENSFALG00000015177) #10	GSTO1 (ENSFALG00000023298) #12	CFAP43 (ENSFALG00000008825) #13	SFR1 (ENSFALG00000008822) #14	COL17A1 (ENSFALG00000008808) #15	SLK (ENSFALG00000008795) #16	STN1 (ENSFALG00000008791) #17	SH3PXD2A (ENSFALG00000008788) #18	NEURL1 (ENSFALG00000008785) #19	CALHM3 (ENSFALG00000008782) #20	CALHM1 (ENSFALG00000008781) #21	CALHM2 (ENSFALG00000008779) #22	PDCD11 (ENSFALG00000008775) #23	ENSFALG00000008772	TAF5 (ENSFALG00000008762) #25	PCGF6 (ENSFALG00000008758) #26	ENSFALG00000008745	CNNM2 (ENSFALG00000027005) #30	AS3MT (ENSFALG00000008732) #31	BORCS7 (ENSFALG00000027772) #32	CYP17A1 (ENSFALG00000008728) #33	WBP1L (ENSFALG00000023398) #34	SFXN2 (ENSFALG00000008726) #35	ARL3 (ENSFALG00000023787) #36	TRIM8 (ENSFALG00000008714) #37	SUFU (ENSFALG00000008706)
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Zebra finch	MODERN SPECIES	28	XPNPEP1 (ENSTGUG00000010544)	ENSTGUG00000019641	SORCS1 (ENSTGUG00000010498) #7	SORCS3 (ENSTGUG00000010448) #8	CFAP58 (ENSTGUG00000010439) #9	ITPRIP (ENSTGUG00000010438) #10	GSTO1 (ENSTGUG00000010435) #12	CFAP43 (ENSTGUG00000010429) #13	SFR1 (ENSTGUG00000028915) #14	COL17A1 (ENSTGUG00000010406) #15	SLK (ENSTGUG00000010378) #16	STN1 (ENSTGUG00000010354) #17	SH3PXD2A (ENSTGUG00000010339) #18	NEURL1 (ENSTGUG00000010332) #19	CALHM3 (ENSTGUG00000010326) #20	CALHM1 (ENSTGUG00000010322) #21	CALHM2 (ENSTGUG00000010317) #22	ENSTGUG00000020703	TAF5 (ENSTGUG00000010278) #25	PDCD11 (ENSTGUG00000010303) #23	INA (ENSTGUG00000010268) #27	PCGF6 (ENSTGUG00000021064) #26	ENSTGUG00000010251	CNNM2 (ENSTGUG00000010244) #30	AS3MT (ENSTGUG00000010233) #31	BORCS7 (ENSTGUG00000010228) #32	CYP17A1 (ENSTGUG00000010219) #33	WBP1L (ENSTGUG00000019651) #34	SFXN2 (ENSTGUG00000010190) #35	ARL3 (ENSTGUG00000019757) #36	TRIM8 (ENSTGUG00000010157) #37
Common canary	MODERN SPECIES	7	ADD3 (ENSSCAG00000015803)	XPNPEP1 (ENSSCAG00000015812)	SORCS1 (ENSSCAG00000015963) #7	SORCS3 (ENSSCAG00000016194) #8	ENSSCAG00000016213	ITPRIP (ENSSCAG00000016214) #10	GSTO1 (ENSSCAG00000016216) #12	ENSSCAG00000016218 #13	SFR1 (ENSSCAG00000016224) #14	ENSSCAG00000016228	SLK (ENSSCAG00000016280) #16	STN1 (ENSSCAG00000016371) #17	SH3PXD2A (ENSSCAG00000016378) #18	NEURL1 (ENSSCAG00000016390) #19	CALHM3 (ENSSCAG00000016394) #20	CALHM1 (ENSSCAG00000016401) #21	CALHM2 (ENSSCAG00000016403) #22	PDCD11 (ENSSCAG00000016425) #23	ENSSCAG00000016437	TAF5 (ENSSCAG00000016438) #25	PCGF6 (ENSSCAG00000016440) #26	ENSSCAG00000016444	CNNM2 (ENSSCAG00000016453) #30	AS3MT (ENSSCAG00000016464) #31	BORCS7 (ENSSCAG00000016467) #32	CYP17A1 (ENSSCAG00000016469) #33	WBP1L (ENSSCAG00000016475) #34	SFXN2 (ENSSCAG00000016485) #35	ARL3 (ENSSCAG00000016489) #36	TRIM8 (ENSSCAG00000016492) #37	SUFU (ENSSCAG00000016503)
Medium ground finch	MODERN SPECIES	3	ADD3 (ENSGFOG00000000019)	XPNPEP1 (ENSGFOG00000000025)	SORCS1 (ENSGFOG00000000098) #7	SORCS3 (ENSGFOG00000000897) #8	CFAP58 (ENSGFOG00000002012) #9	ITPRIP (ENSGFOG00000002026) #10	GSTO1 (ENSGFOG00000002031) #12	CFAP43 (ENSGFOG00000002038) #13	SFR1 (ENSGFOG00000002070) #14	COL17A1 (ENSGFOG00000002087) #15	SLK (ENSGFOG00000002125) #16	STN1 (ENSGFOG00000002147) #17	SH3PXD2A (ENSGFOG00000002444) #18	NEURL1 (ENSGFOG00000002459) #19	CALHM3 (ENSGFOG00000002487) #20	CALHM1 (ENSGFOG00000002507) #21	CALHM2 (ENSGFOG00000002524) #22	PDCD11 (ENSGFOG00000002545) #23	ENSGFOG00000002587	TAF5 (ENSGFOG00000002614) #25	PCGF6 (ENSGFOG00000002773) #26	ENSGFOG00000002787 #27	ENSGFOG00000002800	CNNM2 (ENSGFOG00000002873) #30	AS3MT (ENSGFOG00000003051) #31	BORCS7 (ENSGFOG00000003091) #32	CYP17A1 (ENSGFOG00000003105) #33	WBP1L (ENSGFOG00000003125) #34	SFXN2 (ENSGFOG00000003144) #35	ARL3 (ENSGFOG00000003169) #36	TRIM8 (ENSGFOG00000003192) #37
Great tit	MODERN SPECIES	26	ADD3 (ENSPMJG00000005151)	XPNPEP1 (ENSPMJG00000005139)	ENSPMJG00000005133 #7	SORCS3 (ENSPMJG00000004998) #8	CFAP58 (ENSPMJG00000004959) #9	ITPRIP (ENSPMJG00000004954) #10	GSTO1 (ENSPMJG00000004953) #12	CFAP43 (ENSPMJG00000004936) #13	SFR1 (ENSPMJG00000004933) #14	COL17A1 (ENSPMJG00000004922) #15	SLK (ENSPMJG00000004918) #16	STN1 (ENSPMJG00000004908) #17	SH3PXD2A (ENSPMJG00000004903) #18	NEURL1 (ENSPMJG00000004900) #19	CALHM3 (ENSPMJG00000004896) #20	CALHM1 (ENSPMJG00000004895) #21	CALHM2 (ENSPMJG00000004894) #22	PDCD11 (ENSPMJG00000004885) #23	ENSPMJG00000004884	TAF5 (ENSPMJG00000004873) #25	PCGF6 (ENSPMJG00000004871) #26	ENSPMJG00000004870 #27	ENSPMJG00000004864	CNNM2 (ENSPMJG00000004847) #30	AS3MT (ENSPMJG00000004824) #31	BORCS7 (ENSPMJG00000004813) #32	CYP17A1 (ENSPMJG00000004801) #33	WBP1L (ENSPMJG00000004795) #34	SFXN2 (ENSPMJG00000004788) #35	ARL3 (ENSPMJG00000004786) #36	TRIM8 (ENSPMJG00000004768) #37
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Kakapo	MODERN SPECIES	22	ADD3 (ENSSHBG00005007229)	XPNPEP1 (ENSSHBG00005007133)	SORCS1 (ENSSHBG00005004648) #7	SORCS3 (ENSSHBG00005004232) #8	CFAP58 (ENSSHBG00005004147) #9	ITPRIP (ENSSHBG00005004137) #10	GSTO1 (ENSSHBG00005004123) #12	ENSSHBG00005004116 #13	ENSSHBG00005004081 #13	SFR1 (ENSSHBG00005004060) #14	SLK (ENSSHBG00005004050) #16	STN1 (ENSSHBG00005004031) #17	SH3PXD2A (ENSSHBG00005004014) #18	NEURL1 (ENSSHBG00005003998) #19	CALHM3 (ENSSHBG00005003981) #20	CALHM1 (ENSSHBG00005003959) #21	CALHM2 (ENSSHBG00005003944) #22	PDCD11 (ENSSHBG00005003710) #23	ENSSHBG00005003514	TAF5 (ENSSHBG00005003500) #25	PCGF6 (ENSSHBG00005003486) #26	INA (ENSSHBG00005003473) #27	ENSSHBG00005003426	CNNM2 (ENSSHBG00005003379) #30	AS3MT (ENSSHBG00005003341) #31	BORCS7 (ENSSHBG00005003312) #32	CYP17A1 (ENSSHBG00005003271) #33	WBP1L (ENSSHBG00005003246) #34	SFXN2 (ENSSHBG00005003217) #35	ARL3 (ENSSHBG00005003201) #36	TRIM8 (ENSSHBG00005003188) #37
Golden eagle	MODERN SPECIES	2	SORCS1 (ENSACCG00020007028) #7	SORCS3 (ENSACCG00020007845) #8	ENSACCG00020008431	ENSACCG00020008439 #9	ITPRIP (ENSACCG00020008449) #10	GSTO1 (ENSACCG00020008459) #12	ENSACCG00020008473 #13	ENSACCG00020008494 #13	SFR1 (ENSACCG00020008505) #14	COL17A1 (ENSACCG00020008541) #15	SLK (ENSACCG00020008584) #16	STN1 (ENSACCG00020008611) #17	SH3PXD2A (ENSACCG00020008630) #18	NEURL1 (ENSACCG00020008657) #19	CALHM3 (ENSACCG00020008676) #20	CALHM1 (ENSACCG00020008691) #21	PDCD11 (ENSACCG00020008722) #23	CALHM2 (ENSACCG00020008777) #22	TAF5 (ENSACCG00020008799) #25	PCGF6 (ENSACCG00020008830) #26	INA (ENSACCG00020008852) #27	ENSACCG00020008884	CNNM2 (ENSACCG00020008928) #30	AS3MT (ENSACCG00020008961) #31	BORCS7 (ENSACCG00020008980) #32	CYP17A1 (ENSACCG00020009021) #33	WBP1L (ENSACCG00020009066) #34	SFXN2 (ENSACCG00020009091) #35	ARL3 (ENSACCG00020009119) #36	TRIM8 (ENSACCG00020009134) #37	SUFU (ENSACCG00020009151)
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00880000138014.b.i	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Pink-footed goose	MODERN SPECIES	11	XPNPEP1 (ENSABRG00000006458)	SORCS1 (ENSABRG00000006509) #7	ENSABRG00000006569	SORCS3 (ENSABRG00000006638) #8	CFAP58 (ENSABRG00000007070) #9	ITPRIP (ENSABRG00000007102) #10	GSTO1 (ENSABRG00000007104) #12	CFAP43 (ENSABRG00000007106) #13	SFR1 (ENSABRG00000007118) #14	COL17A1 (ENSABRG00000007126) #15	SLK (ENSABRG00000007148) #16	STN1 (ENSABRG00000007161) #17	SH3PXD2A (ENSABRG00000007174) #18	NEURL1 (ENSABRG00000007194) #19	CALHM3 (ENSABRG00000007209) #20	CALHM1 (ENSABRG00000007212) #21	CALHM2 (ENSABRG00000007215) #22	PDCD11 (ENSABRG00000007218) #23	ENSABRG00000007233	TAF5 (ENSABRG00000007239) #25	PCGF6 (ENSABRG00000007251) #26	INA (ENSABRG00000007311) #27	ENSABRG00000007316	CNNM2 (ENSABRG00000007326) #30	AS3MT (ENSABRG00000007335) #31	BORCS7 (ENSABRG00000007354) #32	CYP17A1 (ENSABRG00000007357) #33	WBP1L (ENSABRG00000007376) #34	SFXN2 (ENSABRG00000007382) #35	ARL3 (ENSABRG00000007391) #36	TRIM8 (ENSABRG00000007399) #37
Duck	MODERN SPECIES	24	ADD3 (ENSAPLG00000004481)	XPNPEP1 (ENSAPLG00000013402)	SORCS1 (ENSAPLG00000004914) #7	ENSAPLG00000005363	ENSAPLG00000017158 #8	CFAP58 (ENSAPLG00000005743) #9	ITPRIP (ENSAPLG00000005949) #10	CFAP43 (ENSAPLG00000006084) #13	SFR1 (ENSAPLG00000016782) #14	COL17A1 (ENSAPLG00000006175) #15	SLK (ENSAPLG00000006212) #16	STN1 (ENSAPLG00000006661) #17	SH3PXD2A (ENSAPLG00000006691) #18	NEURL1 (ENSAPLG00000006704) #19	CALHM3 (ENSAPLG00000015563) #20	CALHM1 (ENSAPLG00000010081) #21	CALHM2 (ENSAPLG00000019475) #22	PDCD11 (ENSAPLG00000010301) #23	ENSAPLG00000019499	TAF5 (ENSAPLG00000011406) #25	PCGF6 (ENSAPLG00000026176) #26	ENSAPLG00000027671 #27	ENSAPLG00000018565 #27	ENSAPLG00000023786 #29	CNNM2 (ENSAPLG00000013829) #30	BORCS7 (ENSAPLG00000004416) #32	CYP17A1 (ENSAPLG00000012297) #33	WBP1L (ENSAPLG00000012879) #34	SFXN2 (ENSAPLG00000030360) #35	ARL3 (ENSAPLG00000016017) #36	TRIM8 (ENSAPLG00000002530) #37
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Japanese quail	MODERN SPECIES	24	MXI1 (ENSCJPG00005020027)	ADD3 (ENSCJPG00005020026)	XPNPEP1 (ENSCJPG00005020024)	SORCS1 (ENSCJPG00005020021) #7	SORCS3 (ENSCJPG00005020015) #8	CFAP58 (ENSCJPG00005020013) #9	ITPRIP (ENSCJPG00005020012) #10	GSTO1 (ENSCJPG00005020011) #12	CFAP43 (ENSCJPG00005020010) #13	SFR1 (ENSCJPG00005020009) #14	SLK (ENSCJPG00005020006) #16	STN1 (ENSCJPG00005020005) #17	SH3PXD2A (ENSCJPG00005020004) #18	NEURL1 (ENSCJPG00005020003) #19	CALHM3 (ENSCJPG00005020002) #20	CALHM1 (ENSCJPG00005020001) #21	CALHM2 (ENSCJPG00005020000) #22	PDCD11 (ENSCJPG00005019999) #23	ENSCJPG00005019998	TAF5 (ENSCJPG00005019997) #25	PCGF6 (ENSCJPG00005019996) #26	INA (ENSCJPG00005019995) #27	ENSCJPG00005019994	CNNM2 (ENSCJPG00005019993) #30	AS3MT (ENSCJPG00005019992) #31	BORCS7 (ENSCJPG00005019991) #32	CYP17A1 (ENSCJPG00005019990) #33	WBP1L (ENSCJPG00005019989) #34	SFXN2 (ENSCJPG00005019988) #35	ARL3 (ENSCJPG00005019987) #36	TRIM8 (ENSCJPG00005019986) #37
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Turkey	MODERN SPECIES	28	ADD3 (ENSMGAG00000010717)	XPNPEP1 (ENSMGAG00000010742)	SORCS1 (ENSMGAG00000010697) #7	SORCS3 (ENSMGAG00000010686) #8	CFAP58 (ENSMGAG00000010672) #9	ITPRIP (ENSMGAG00000015336) #10	GSTO1 (ENSMGAG00000010660) #12	CFAP43 (ENSMGAG00000010597) #13	SFR1 (ENSMGAG00000010591) #14	COL17A1 (ENSMGAG00000010621) #15	SLK (ENSMGAG00000010557) #16	STN1 (ENSMGAG00000010550) #17	SH3PXD2A (ENSMGAG00000010540) #18	NEURL1 (ENSMGAG00000010527) #19	CALHM3 (ENSMGAG00000010524) #20	CALHM1 (ENSMGAG00000010522) #21	CALHM2 (ENSMGAG00000010516) #22	PDCD11 (ENSMGAG00000010482) #23	ENSMGAG00000022024	TAF5 (ENSMGAG00000010475) #25	PCGF6 (ENSMGAG00000019850) #26	ENSMGAG00000020111 #27	ENSMGAG00000010436	CNNM2 (ENSMGAG00000016951) #30	AS3MT (ENSMGAG00000010402) #31	CYP17A1 (ENSMGAG00000010364) #33	WBP1L (ENSMGAG00000010362) #34	SFXN2 (ENSMGAG00000010330) #35	ARL3 (ENSMGAG00000010320) #36	TRIM8 (ENSMGAG00000010315) #37	SUFU (ENSMGAG00000010288)
Chicken	MODERN SPECIES	35	ADD3 (ENSGALG00010020211)	XPNPEP1 (ENSGALG00010020183)	SORCS1 (ENSGALG00010020170) #7	SORCS3 (ENSGALG00010019237) #8	CFAP58 (ENSGALG00010021455) #9	ITPRIP (ENSGALG00010021439) #10	GSTO2 (ENSGALG00010021390) #12	CFAP43 (ENSGALG00010021352) #13	SFR1 (ENSGALG00010021342) #14	COL17A1 (ENSGALG00010021287) #15	SLK (ENSGALG00010021240) #16	STN1 (ENSGALG00010021231) #17	SH3PXD2A (ENSGALG00010021215) #18	NEURL1 (ENSGALG00010021166) #19	CALHM3 (ENSGALG00010021132) #20	CALHM1 (ENSGALG00010021128) #21	CALHM2 (ENSGALG00010021124) #22	PDCD11 (ENSGALG00010021120) #23	USMG5 (ENSGALG00010021118)	TAF5 (ENSGALG00010021112) #25	PCGF6 (ENSGALG00010021108) #26	INA (ENSGALG00010021104) #27	NT5C2 (ENSGALG00010021095)	CNNM2 (ENSGALG00010021065) #30	AS3MT (ENSGALG00010018229) #31	BORCS7 (ENSGALG00010018199) #32	CYP17A1 (ENSGALG00010018183) #33	WBP1L (ENSGALG00010018831) #34	SFXN2 (ENSGALG00010018701) #35	ARL3 (ENSGALG00010018685) #36	ENSGALG00010018621
African ostrich	MODERN SPECIES	290													SH3PXD2A (ENSSCUG00000002067) #18	NEURL1 (ENSSCUG00000002062) #19	CALHM3 (ENSSCUG00000002056) #20	CALHM1 (ENSSCUG00000002050) #21	CALHM2 (ENSSCUG00000002045) #22	PDCD11 (ENSSCUG00000002038) #23	ENSSCUG00000002034	TAF5 (ENSSCUG00000002033) #25	PCGF6 (ENSSCUG00000002030) #26	ENSSCUG00000002023	CNNM2 (ENSSCUG00000002018) #30	AS3MT (ENSSCUG00000002015) #31	CYP17A1 (ENSSCUG00000001998) #33	WBP1L (ENSSCUG00000001977) #34	ARL3 (ENSSCUG00000001973) #36	TRIM8 (ENSSCUG00000001970) #37	SUFU (ENSSCUG00000001964)	ACTR1A (ENSSCUG00000001959)	MFSD13A (ENSSCUG00000001958)
Anura	ANCESTRAL SPECIES	25	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT00570000079216	ENSGT01030000234549.a.b	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT00390000018550 #14	ENSGT00940000163514.C	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000155737.a.b ##36
Frog	MODERN SPECIES	7	ENSXETG00000037556	XB5799637 (ENSXETG00000026599)	cfap46 (ENSXETG00000014784)	ENSXETG00000042597	ENSXETG00000014777	gsto1 (ENSXETG00000026601)	gsto2 (ENSXETG00000026602) #12	sfr1 (ENSXETG00000011407) #14	col17a1 (ENSXETG00000033563)	slk (ENSXETG00000030054) #16	stn1 (ENSXETG00000011402) #17	ENSXETG00000047506	sh3pxd2a (ENSXETG00000011399) #18	neurl1 (ENSXETG00000011397) #19	calhm3 (ENSXETG00000033589) #20	calhm1 (ENSXETG00000031601) #21	calhm2 (ENSXETG00000011395) #22	pdcd11 (ENSXETG00000009482) #23	atp5mk (ENSXETG00000034854)	taf5 (ENSXETG00000011394) #25	pcgf6 (ENSXETG00000038066) #26	ina (ENSXETG00000009478) #27	nt5c2 (ENSXETG00000009475)	cnnm2 (ENSXETG00000009464) #30	as3mt.2 (ENSXETG00000031996) #31	borcs7 (ENSXETG00000037489) #32	cyp17a1 (ENSXETG00000015229) #33	wbp1l (ENSXETG00000031465) #34	sfxn2 (ENSXETG00000015227) #35	arl3 (ENSXETG00000015225) #36	ENSXETG00000048305
Leishan spiny toad	MODERN SPECIES	9	TRUB1 (ENSLLEG00000024003)	ATRNL1 (ENSLLEG00000024130)	ENSLLEG00000024434	ENSLLEG00000024454	GFRA1 (ENSLLEG00000024500)	ENSLLEG00000024775	ENSLLEG00000024963	ENSLLEG00000025335	ENSLLEG00000025427	SLK (ENSLLEG00000025533) #16	STN1 (ENSLLEG00000026144) #17	SH3PXD2A (ENSLLEG00000026291) #18	NEURL1 (ENSLLEG00000026595) #19	ENSLLEG00000026720 #20	CALHM3 (ENSLLEG00000026757) #20	CALHM1 (ENSLLEG00000026794) #21	CALHM2 (ENSLLEG00000026828) #22	ENSLLEG00000026851	PDCD11 (ENSLLEG00000026943) #23	ENSLLEG00000027203	TAF5 (ENSLLEG00000027307) #25	PCGF6 (ENSLLEG00000027942) #26	INA (ENSLLEG00000028090) #27	ENSLLEG00000028130	CNNM2 (ENSLLEG00000028384) #30	ENSLLEG00000028460 #31	ENSLLEG00000028609	ENSLLEG00000028642 #31	BORCS7 (ENSLLEG00000028736) #32	CYP17A1 (ENSLLEG00000028763) #33	WBP1L (ENSLLEG00000028803) #34
Coelacanth	MODERN SPECIES	3090														ENSLACG00000022571 #20	CALHM3 (ENSLACG00000002416) #20	CALHM1 (ENSLACG00000003181) #21
Actinopterygii	ANCESTRAL SPECIES	29	ENSGT00940000157716	ENSGT01030000234563.b.a.b.a.a ##7	ENSGT01030000234563.b.a.b.b #7	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184 #16	ENSGT00940000168158	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00390000005029
Neopterygii	ANCESTRAL SPECIES	33	ENSGT00940000157716	ENSGT00760000119781	ENSGT01030000234563.b.a.b.a.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184 #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031
Osteoglossocephalai	ANCESTRAL SPECIES	92							ENSGT00940000157732.f.b #18	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00950000183109.c.a.a.a.b #34
Osteoglossiformes	ANCESTRAL SPECIES	94								ENSGT00940000156184.a.l #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.c #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	116	chuk (ENSPKIG00000000224)	erlin1 (ENSPKIG00000000280)	adam8a (ENSPKIG00000000344)	tubgcp2 (ENSPKIG00000000389)	ENSPKIG00000000429	caly (ENSPKIG00000000434)	ENSPKIG00000000471 ##7	ENSPKIG00000000522 ##7	cfap58 (ENSPKIG00000000602) #9	neurl1aa (ENSPKIG00000000663) #19	SH3PXD2A (ENSPKIG00000000694) #18	stn1 (ENSPKIG00000000721) #17	slkb (ENSPKIG00000000791) #16	ENSPKIG00000000873	ENSPKIG00000000907	CALHM1 (ENSPKIG00000000936) #21	zgc:175214 (ENSPKIG00000000952)	pdcd11 (ENSPKIG00000000973) #23	atp5md (ENSPKIG00000001009)	pcgf6 (ENSPKIG00000001037) #26	inab (ENSPKIG00000001077) #27	nt5c2b (ENSPKIG00000001096)	CNNM2 (ENSPKIG00000001150) #30	as3mt (ENSPKIG00000001196) #31	borcs7 (ENSPKIG00000001240) #32	cyp17a1 (ENSPKIG00000001260) #33	wbp1lb (ENSPKIG00000001289) #34	poll (ENSPKIG00000001318)	dpcd (ENSPKIG00000001362)	fgf8b (ENSPKIG00000001399)	slc2a15b (ENSPKIG00000001451)
P. kingsleyae	MODERN SPECIES	11	ZRANB1 (ENSPKIG00000001121)	CTBP2 (ENSPKIG00000001178)	EDRF1 (ENSPKIG00000001321)	tex36 (ENSPKIG00000001448)	ADAM12 (ENSPKIG00000001470)	ENSPKIG00000001535	INSYN2A (ENSPKIG00000001600)	SLK (ENSPKIG00000001638) #16	ENSPKIG00000001737	sfr1 (ENSPKIG00000001887) #14	ENSPKIG00000001908 #13	ENSPKIG00000001925	gsto2 (ENSPKIG00000001946) #12	itprip (ENSPKIG00000001965) #10	CALHM3 (ENSPKIG00000001981) #20	CALHM1 (ENSPKIG00000002001) #21	calhm2.1 (ENSPKIG00000002024) #22	ENSPKIG00000002038	taf5 (ENSPKIG00000002076) #25	INA (ENSPKIG00000002123) #27	nt5c2a (ENSPKIG00000002181)	cnnm2a (ENSPKIG00000002307) #30	WBP1L (ENSPKIG00000002346) #34	fbxw4 (ENSPKIG00000002375)	fgf8a (ENSPKIG00000002430)	slc2a15a (ENSPKIG00000002478)	ENSPKIG00000002553	tlx1 (ENSPKIG00000002563)	smap1 (ENSPKIG00000002589)	b3gat2 (ENSPKIG00000002632)	OGFRL1 (ENSPKIG00000002645)
Asian bonytongue	DUPLICATION
Asian bonytongue	MODERN SPECIES	7	tubgcp2 (ENSSFOG00015004584)	ENSSFOG00015004555	caly (ENSSFOG00015004542)	ENSSFOG00015004522	ENSSFOG00015030324	ENSSFOG00015004446 ##7	ENSSFOG00015004363 ##7	cfap58 (ENSSFOG00015004292) #9	neurl1aa (ENSSFOG00015004224) #19	SH3PXD2A (ENSSFOG00015004121) #18	stn1 (ENSSFOG00015004107) #17	slkb (ENSSFOG00015004091) #16	ENSSFOG00015033328	zp3c (ENSSFOG00015004006)	ITPRIP (ENSSFOG00015003993) #10	CALHM1 (ENSSFOG00015003972) #21	zgc:175214 (ENSSFOG00015003933)	pdcd11 (ENSSFOG00015003881) #23	atp5md (ENSSFOG00015003866)	taf5 (ENSSFOG00015003852) #25	pcgf6 (ENSSFOG00015003847) #26	inab (ENSSFOG00015003824) #27	nt5c2b (ENSSFOG00015003738)	CNNM2 (ENSSFOG00015003692) #30	as3mt (ENSSFOG00015003668) #31	borcs7 (ENSSFOG00015003655) #32	cyp17a1 (ENSSFOG00015003625) #33	wbp1lb (ENSSFOG00015003615) #34	poll (ENSSFOG00015003586)	dpcd (ENSSFOG00015003562)	fgf8b (ENSSFOG00015032385)
Asian bonytongue	MODERN SPECIES	19								ENSSFOG00015013008 ##7	ENSSFOG00015012935 ##19	SLK (ENSSFOG00015012846) #16	SFR1 (ENSSFOG00015028199) #14	CFAP43 (ENSSFOG00015012763) #13	ENSSFOG00015012731	itprip (ENSSFOG00015029908) #10	CALHM3 (ENSSFOG00015012698) #20	CALHM1 (ENSSFOG00015012690) #21	calhm2.1 (ENSSFOG00015025842) #22	nt5c2a (ENSSFOG00015012548)	fbxw4 (ENSSFOG00015012488)	fgf8a (ENSSFOG00015012408)	slc2a15a (ENSSFOG00015012364)	TLX1 (ENSSFOG00015026057)	SDHAF4 (ENSSFOG00015030247)	b3gat2 (ENSSFOG00015028654)	OGFRL1 (ENSSFOG00015024337)	asrgl1 (ENSSFOG00015012313)	ENSSFOG00015012291	ENSSFOG00015003071	ddx43 (ENSSFOG00015012193)	CGAS (ENSSFOG00015012161) ##10	EEF1A1 (ENSSFOG00015012136)
Clupeocephala	ANCESTRAL SPECIES	209							ENSGT00940000157732.f.b #18	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b
Euteleosteomorpha	ANCESTRAL SPECIES	95	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00940000164611.b
Acanthomorphata	ANCESTRAL SPECIES	44	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.b	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a
Euacanthomorphacea	ANCESTRAL SPECIES	3	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Pinecone sodierfish	MODERN SPECIES		sec23b (ENSMMDG00005008351)	ccdc85al (ENSMMDG00005008333)	bcl11ab (ENSMMDG00005008224)	ENSMMDG00005008212	ENSMMDG00005008210	ENSMMDG00005008207	ENSMMDG00005008204	ENSMMDG00005008201	ENSMMDG00005008200	ENSMMDG00005008197	mettl26 (ENSMMDG00005008195)	wfikkn1 (ENSMMDG00005008192)	rab40c (ENSMMDG00005008191)	zp3c (ENSMMDG00005008188)	ENSMMDG00005008183 #10	CALHM1 (ENSMMDG00005008179) #21	zgc:175214 (ENSMMDG00005008175)	pdcd11 (ENSMMDG00005008071) #23	atp5md (ENSMMDG00005008056)	taf5 (ENSMMDG00005008045) #25	inab (ENSMMDG00005007875) #27	nt5c2b (ENSMMDG00005007771)	CNNM2 (ENSMMDG00005007741) #30	as3mt (ENSMMDG00005007716) #31	wbp1lb (ENSMMDG00005007703) #34	poll (ENSMMDG00005007701)	dpcd (ENSMMDG00005007698)	fgf8b (ENSMMDG00005007695)	slc2a15b (ENSMMDG00005007691)	lbx1b (ENSMMDG00005007684)	cenpk (ENSMMDG00005007682)
Percomorphaceae	ANCESTRAL SPECIES	20	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Tiger tail seahorse	MODERN SPECIES	382	ENSHCOG00000016449	gsg1l (ENSHCOG00000016410)	sec23b (ENSHCOG00000016395)	ccdc85al (ENSHCOG00000016340)	bcl11ab (ENSHCOG00000016317)	ENSHCOG00000016288	ENSHCOG00000016242	ENSHCOG00000016234	ENSHCOG00000016200	ENSHCOG00000016183	ENSHCOG00000016166	mettl26 (ENSHCOG00000016110)	wfikkn1 (ENSHCOG00000016101)	rab40c (ENSHCOG00000016094)	zp3c (ENSHCOG00000016062)	CALHM1 (ENSHCOG00000016043) #21	zgc:175214 (ENSHCOG00000016032)	pdcd11 (ENSHCOG00000016006) #23	taf5 (ENSHCOG00000015986) #25	atp5md (ENSHCOG00000015974)	inab (ENSHCOG00000015969) #27	nt5c2b (ENSHCOG00000015940)	CNNM2 (ENSHCOG00000015891) #30	as3mt (ENSHCOG00000015743) #31	as3mt (ENSHCOG00000015739) #31	wbp1lb (ENSHCOG00000015735) #34	ENSHCOG00000015728	poll (ENSHCOG00000015721)	dpcd (ENSHCOG00000015714)	fgf8b (ENSHCOG00000015697)	slc2a15b (ENSHCOG00000015684)
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Ovalentaria	ANCESTRAL SPECIES		ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Atherinomorphae	ANCESTRAL SPECIES	23	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Cyprinodontiformes	ANCESTRAL SPECIES	24	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Aplocheiloidei	ANCESTRAL SPECIES	31	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Mangrove rivulus	MODERN SPECIES	38	TMC7 (ENSKMAG00000021408)	ENSKMAG00000021391	gsg1l (ENSKMAG00000021380)	sec23b (ENSKMAG00000021344)	ccdc85al (ENSKMAG00000021327)	bcl11ab (ENSKMAG00000021315)	ENSKMAG00000021301	ENSKMAG00000021286	ENSKMAG00000021267	ENSKMAG00000021256	mettl26 (ENSKMAG00000021245)	wfikkn1 (ENSKMAG00000021240)	rab40c (ENSKMAG00000021228)	ITPRIP (ENSKMAG00000021224) #10	zp3c (ENSKMAG00000021215)	CALHM1 (ENSKMAG00000021204) #21	zgc:175214 (ENSKMAG00000021197)	pdcd11 (ENSKMAG00000021182) #23	atp5md (ENSKMAG00000021173)	taf5 (ENSKMAG00000021159) #25	inab (ENSKMAG00000021148) #27	nt5c2b (ENSKMAG00000021101)	CNNM2 (ENSKMAG00000021059) #30	as3mt (ENSKMAG00000021033) #31	wbp1lb (ENSKMAG00000021022) #34	poll (ENSKMAG00000020989)	dpcd (ENSKMAG00000020966)	fgf8b (ENSKMAG00000020954)	slc2a15b (ENSKMAG00000020935)	lbx1b (ENSKMAG00000020930)	cenpk (ENSKMAG00000020916)
Turquoise killifish	MODERN SPECIES	1611	ENSNFUG00015020604	GSG1L (ENSNFUG00015020606)	CCDC85AL (ENSNFUG00015020608)	ENSNFUG00015020610	sec23b (ENSNFUG00015020618)	BCL11AB (ENSNFUG00015020651)	ENSNFUG00015020656	ENSNFUG00015020660	ENSNFUG00015020664	C3H16ORF13 (ENSNFUG00015020708)	wfikkn1 (ENSNFUG00015020711)	ENSNFUG00015000177	rab40c (ENSNFUG00015000183)	zp3c (ENSNFUG00015000211)	ITPRIP (ENSNFUG00015000220) #10	CALHM1 (ENSNFUG00015000229) #21	Nfu_g_1_015927 (ENSNFUG00015000241)	PDCD11 (ENSNFUG00015000262) #23	atp5md (ENSNFUG00015000311)	taf5 (ENSNFUG00015000359) #25	INAB (ENSNFUG00015000460) #27	nt5c2b (ENSNFUG00015000542)	lbx1b (ENSNFUG00015000669)	ENSNFUG00015000676	SMAP1 (ENSNFUG00015000682)	krt94 (ENSNFUG00015000694)	ENSNFUG00015000705	krt98 (ENSNFUG00015000712)	krt98 (ENSNFUG00015000761)	krt15 (ENSNFUG00015000834)	krt99 (ENSNFUG00015000839)
Cyprinodontoidei	ANCESTRAL SPECIES	15	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.a	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a
Poecilia	ANCESTRAL SPECIES	6	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.a	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a
NAME_6	ANCESTRAL SPECIES	4	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000161979.B.o.cb.d.a.a.a.b.a.a.b.a	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a
Sailfin molly	MODERN SPECIES	155							bcl11ab (ENSPLAG00000013545)	ENSPLAG00000013559	ENSPLAG00000013591	ENSPLAG00000013658	ENSPLAG00000014009	mettl26 (ENSPLAG00000014038)	wfikkn1 (ENSPLAG00000014047)	rab40c (ENSPLAG00000014071)	ENSPLAG00000014076 #10	CALHM1 (ENSPLAG00000014085) #21	zgc:175214 (ENSPLAG00000014102)	pdcd11 (ENSPLAG00000014494) #23	atp5md (ENSPLAG00000014523)	taf5 (ENSPLAG00000014541) #25	inab (ENSPLAG00000014545) #27	nt5c2b (ENSPLAG00000014581)	CNNM2 (ENSPLAG00000014611) #30	as3mt (ENSPLAG00000014626) #31	wbp1lb (ENSPLAG00000014630) #34
Amazon molly	MODERN SPECIES	263	TMC7 (ENSPFOG00000008578)	ENSPFOG00000008345	gsg1l (ENSPFOG00000008329)	ccdc85al (ENSPFOG00000022088)	sec23b (ENSPFOG00000007863)	sec23b (ENSPFOG00000007390)	ccdc85al (ENSPFOG00000007370)	bcl11ab (ENSPFOG00000007302)	ENSPFOG00000007052	ENSPFOG00000006907	ENSPFOG00000006561	mettl26 (ENSPFOG00000006434)	wfikkn1 (ENSPFOG00000006418)	rab40c (ENSPFOG00000006359)	ENSPFOG00000006350 #10	CALHM1 (ENSPFOG00000006328) #21	zgc:175214 (ENSPFOG00000006256)	pdcd11 (ENSPFOG00000006012) #23	atp5md (ENSPFOG00000005996)	taf5 (ENSPFOG00000005851) #25	inab (ENSPFOG00000005819) #27	nt5c2b (ENSPFOG00000005673)	ENSPFOG00000023945	CNNM2 (ENSPFOG00000005465) #30	as3mt (ENSPFOG00000005360) #31	wbp1lb (ENSPFOG00000005308) #34	ENSPFOG00000005288	poll (ENSPFOG00000005193)	dpcd (ENSPFOG00000005133)	fgf8b (ENSPFOG00000005060)	slc2a15b (ENSPFOG00000004745)
Guppy	MODERN SPECIES	439	NOMO1 (ENSPREG00000000492)	TMC7 (ENSPREG00000000491)	ENSPREG00000000490	gsg1l (ENSPREG00000000489)	sec23b (ENSPREG00000000488)	ccdc85al (ENSPREG00000000487)	bcl11ab (ENSPREG00000000486)	ENSPREG00000000485	ENSPREG00000000484	ENSPREG00000000483	ENSPREG00000000482	mettl26 (ENSPREG00000000481)	wfikkn1 (ENSPREG00000000480)	rab40c (ENSPREG00000000479)	ENSPREG00000000478 #10	CALHM1 (ENSPREG00000000477) #21	zgc:175214 (ENSPREG00000000476)	pdcd11 (ENSPREG00000000475) #23	atp5md (ENSPREG00000000474)	taf5 (ENSPREG00000000473) #25	inab (ENSPREG00000000472) #27	nt5c2b (ENSPREG00000000471)	CNNM2 (ENSPREG00000000470) #30	as3mt (ENSPREG00000000469) #31	wbp1lb (ENSPREG00000000468) #34	ENSPREG00000000467	poll (ENSPREG00000000466)	dpcd (ENSPREG00000000465)	fgf8b (ENSPREG00000000464)	slc2a15b (ENSPREG00000000463)	lbx1b (ENSPREG00000000462)
Platyfish	MODERN SPECIES	19	ENSXMAG00000004810	gsg1l (ENSXMAG00000004804)	sec23b (ENSXMAG00000004757)	ccdc85al (ENSXMAG00000023108)	bcl11ab (ENSXMAG00000004749)	ENSXMAG00000025021	ENSXMAG00000029197	ENSXMAG00000004735	ENSXMAG00000004687	ENSXMAG00000024097	ENSXMAG00000004675	mettl26 (ENSXMAG00000028408)	wfikkn1 (ENSXMAG00000004666)	rab40c (ENSXMAG00000004660)	ENSXMAG00000004659 #10	CALHM1 (ENSXMAG00000028928) #21	zgc:175214 (ENSXMAG00000026427)	pdcd11 (ENSXMAG00000004638) #23	taf5 (ENSXMAG00000001343) #25	atp5md (ENSXMAG00000004636)	inab (ENSXMAG00000001377) #27	nt5c2b (ENSXMAG00000029312)	CNNM2 (ENSXMAG00000000054) #30	as3mt (ENSXMAG00000000056) #31	wbp1lb (ENSXMAG00000000063) #34	ENSXMAG00000029703	poll (ENSXMAG00000000075)	dpcd (ENSXMAG00000000098)	fgf8b (ENSXMAG00000021661)	slc2a15b (ENSXMAG00000000115)	lbx1b (ENSXMAG00000012488)
NAME_4	ANCESTRAL SPECIES	28	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Mummichog	MODERN SPECIES	516								ENSFHEG00000022510	ENSFHEG00000022512	ENSFHEG00000022669	mettl26 (ENSFHEG00000022695)	wfikkn1 (ENSFHEG00000022707)	rab40c (ENSFHEG00000022727)	ENSFHEG00000022735 #10	zp3c (ENSFHEG00000022739)	CALHM1 (ENSFHEG00000022746) #21	zgc:175214 (ENSFHEG00000022752)	pdcd11 (ENSFHEG00000022997) #23	atp5md (ENSFHEG00000023039)	ENSFHEG00000023060 #25	inab (ENSFHEG00000023068) #27	nt5c2b (ENSFHEG00000023123)	CNNM2 (ENSFHEG00000023134) #30	as3mt (ENSFHEG00000023153) #31	wbp1lb (ENSFHEG00000023168) #34	poll (ENSFHEG00000023246)	dpcd (ENSFHEG00000003458)	fgf8b (ENSFHEG00000003480)
Sheepshead minnow	MODERN SPECIES	350	xylt1 (ENSCVAG00000019644)	NOMO1 (ENSCVAG00000019616)	TMC7 (ENSCVAG00000019439)	ENSCVAG00000019426	gsg1l (ENSCVAG00000019392)	sec23b (ENSCVAG00000019381)	ccdc85al (ENSCVAG00000019310)	bcl11ab (ENSCVAG00000019293)	ENSCVAG00000019283	ENSCVAG00000019111	CCDC88A (ENSCVAG00000019101)	mettl26 (ENSCVAG00000018983)	wfikkn1 (ENSCVAG00000018976)	rab40c (ENSCVAG00000018972)	ENSCVAG00000000493 #10	CALHM1 (ENSCVAG00000018941) #21	zgc:175214 (ENSCVAG00000018932)	pdcd11 (ENSCVAG00000018903) #23	taf5 (ENSCVAG00000018791) #25	atp5md (ENSCVAG00000018741)
Oryzias	ANCESTRAL SPECIES	28	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Oryzias_b	ANCESTRAL SPECIES	25	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Javanese ricefish	MODERN SPECIES		gsg1l (ENSOJAG00000019364)	sec23b (ENSOJAG00000019399)	ccdc85al (ENSOJAG00000019664)	ENSOJAG00000019680	bcl11ab (ENSOJAG00000019758)	ENSOJAG00000019770	ENSOJAG00000019778	ENSOJAG00000019789	ENSOJAG00000019795	ENSOJAG00000019806	ENSOJAG00000020098	mettl26 (ENSOJAG00000020215)	wfikkn1 (ENSOJAG00000020222)	rab40c (ENSOJAG00000020244)	ENSOJAG00000020252 #10	CALHM1 (ENSOJAG00000020274) #21	zgc:175214 (ENSOJAG00000020287)	atp5md (ENSOJAG00000000058)	taf5 (ENSOJAG00000000065) #25	inab (ENSOJAG00000000103) #27	CNNM2 (ENSOJAG00000000181) #30	as3mt (ENSOJAG00000000202) #31	wbp1lb (ENSOJAG00000000223) #34	poll (ENSOJAG00000000244)	dpcd (ENSOJAG00000000263)	fgf8b (ENSOJAG00000000269)	slc2a15b (ENSOJAG00000000287)	lbx1b (ENSOJAG00000000302)	cenpk (ENSOJAG00000000304)	SMAP1 (ENSOJAG00000000318)	ENSOJAG00000000325
Indian medaka	MODERN SPECIES	35	TMC7 (ENSOMEG00000010313)	ENSOMEG00000010353	gsg1l (ENSOMEG00000010373)	sec23b (ENSOMEG00000010428)	ccdc85al (ENSOMEG00000000850)	bcl11ab (ENSOMEG00000000252)	ENSOMEG00000010513	ENSOMEG00000010560	ENSOMEG00000010609	ENSOMEG00000010665	ENSOMEG00000010693	mettl26 (ENSOMEG00000010721)	wfikkn1 (ENSOMEG00000010737)	rab40c (ENSOMEG00000010770)	ENSOMEG00000010787 #10	CALHM1 (ENSOMEG00000010803) #21	zgc:175214 (ENSOMEG00000010830)	pdcd11 (ENSOMEG00000010904) #23	ENSOMEG00000010947 #23	atp5md (ENSOMEG00000010965)	taf5 (ENSOMEG00000011058) #25	inab (ENSOMEG00000011083) #27	nt5c2b (ENSOMEG00000011133)	CNNM2 (ENSOMEG00000011258) #30	wbp1lb (ENSOMEG00000011311) #34	poll (ENSOMEG00000011333)	dpcd (ENSOMEG00000011358)	fgf8b (ENSOMEG00000011400)	slc2a15b (ENSOMEG00000011443)	lbx1b (ENSOMEG00000011455)	cenpk (ENSOMEG00000011482)
Oryzias_a	ANCESTRAL SPECIES	34	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000163289.b.a.a	ENSGT00940000154418.a.a.b #27	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Japanese Medaka HdrR	MODERN SPECIES		ENSORLG00000029171	sec23b (ENSORLG00000013229)	ccdc85al (ENSORLG00000026164)	ENSORLG00000026359	ENSORLG00000026546	ENSORLG00000025641	bcl11ab (ENSORLG00000022323)	ENSORLG00000024629	ENSORLG00000013142	ENSORLG00000013110	ENSORLG00000013096	mettl26 (ENSORLG00000013070)	wfikkn1 (ENSORLG00000013057)	RAB40C (ENSORLG00000013043)	ENSORLG00000013028 #10	CALHM1 (ENSORLG00000013016) #21	zgc:175214 (ENSORLG00000026419)	pdcd11 (ENSORLG00000012995) #23	atp5md (ENSORLG00000024513)	taf5 (ENSORLG00000012986) #25	nt5c2b (ENSORLG00000012969)	inab (ENSORLG00000012931) #27	CNNM2 (ENSORLG00000012918) #30	as3mt (ENSORLG00000012900) #31	wbp1lb (ENSORLG00000024654) #34	poll (ENSORLG00000012875)	dpcd (ENSORLG00000027280)	fgf8b (ENSORLG00000012857)	slc2a15b (ENSORLG00000012848)	lbx1b (ENSORLG00000012711)	cenpk (ENSORLG00000012705)
Chinese medaka	MODERN SPECIES	305							bcl11ab (ENSOSIG00000015284)	ENSOSIG00000015285	ENSOSIG00000015288	PLD5 (ENSOSIG00000015289)	ENSOSIG00000015291	mettl26 (ENSOSIG00000015410)	wfikkn1 (ENSOSIG00000015413)	rab40c (ENSOSIG00000015415)	ITPRIP (ENSOSIG00000015417) #10	CALHM1 (ENSOSIG00000015418) #21	zgc:175214 (ENSOSIG00000015419)	pdcd11 (ENSOSIG00000015423) #23	atp5md (ENSOSIG00000015431)	taf5 (ENSOSIG00000015439) #25	nt5c2b (ENSOSIG00000015706)	inab (ENSOSIG00000015976) #27	CNNM2 (ENSOSIG00000015977) #30	as3mt (ENSOSIG00000015978) #31	wbp1lb (ENSOSIG00000015980) #34	poll (ENSOSIG00000015983)	dpcd (ENSOSIG00000015989)	fgf8b (ENSOSIG00000015992)	slc2a15b (ENSOSIG00000016129)	lbx1b (ENSOSIG00000016142)	cenpk (ENSOSIG00000016144)
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Pomacentridae	ANCESTRAL SPECIES	20	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Pomacentridae_A	ANCESTRAL SPECIES	13	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Amphiprion	ANCESTRAL SPECIES		ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT00950000182812.G.n.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000153342.a #25	ENSGT00940000166377	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Clown anemonefish	MODERN SPECIES	1065	ENSAOCG00000016129	ENSAOCG00000016078	gsg1l (ENSAOCG00000016052)	sec23b (ENSAOCG00000016031)	ccdc85al (ENSAOCG00000015956)	bcl11ab (ENSAOCG00000015947)	ENSAOCG00000015921	ENSAOCG00000015891	ENSAOCG00000015763	ENSAOCG00000001800	mettl26 (ENSAOCG00000015462)	wfikkn1 (ENSAOCG00000015440)	rab40c (ENSAOCG00000015431)	zp3c (ENSAOCG00000015396)	ENSAOCG00000001067 #10	CALHM1 (ENSAOCG00000015350) #21	zgc:175214 (ENSAOCG00000015327)	pdcd11 (ENSAOCG00000015287) #23	taf5 (ENSAOCG00000001060) #25	atp5md (ENSAOCG00000015202)	inab (ENSAOCG00000001059) #27	ENSAOCG00000015178	ENSAOCG00000015119	itga3b (ENSAOCG00000002539)	dlx3b (ENSAOCG00000014963)	dlx4b (ENSAOCG00000014952)	ENSAOCG00000014899	kat7b (ENSAOCG00000014886)	ptges3l (ENSAOCG00000014828)	aarsd1 (ENSAOCG00000014735)	myof (ENSAOCG00000014674)
Orange clownfish	MODERN SPECIES	17	ENSAPEG00000019610	ENSAPEG00000019648	gsg1l (ENSAPEG00000019668)	sec23b (ENSAPEG00000019724)	ccdc85al (ENSAPEG00000019787)	bcl11ab (ENSAPEG00000019802)	ENSAPEG00000019811	ENSAPEG00000019840	ENSAPEG00000019919	ENSAPEG00000019979	mettl26 (ENSAPEG00000020105)	wfikkn1 (ENSAPEG00000020129)	rab40c (ENSAPEG00000020137)	ENSAPEG00000020158	ENSAPEG00000020183 #10	CALHM1 (ENSAPEG00000020194) #21	zgc:175214 (ENSAPEG00000020209)	pdcd11 (ENSAPEG00000020240) #23	taf5 (ENSAPEG00000020262) #25	atp5md (ENSAPEG00000020309)	inab (ENSAPEG00000020332) #27	nt5c2b (ENSAPEG00000020408)	CNNM2 (ENSAPEG00000020499) #30	as3mt (ENSAPEG00000020598) #31	wbp1lb (ENSAPEG00000020616) #34	poll (ENSAPEG00000020633)	dpcd (ENSAPEG00000020676)	fgf8b (ENSAPEG00000020700)	slc2a15b (ENSAPEG00000020772)	lbx1b (ENSAPEG00000020806)	cenpk (ENSAPEG00000020835)
Spiny chromis	MODERN SPECIES	22	NOMO1 (ENSAPOG00000016226)	TMC7 (ENSAPOG00000016104)	ENSAPOG00000016084	gsg1l (ENSAPOG00000016023)	sec23b (ENSAPOG00000016012)	ccdc85al (ENSAPOG00000015989)	bcl11ab (ENSAPOG00000000446)	CEP170 (ENSAPOG00000015920)	ENSAPOG00000015843	ENSAPOG00000015828	mettl26 (ENSAPOG00000015790)	wfikkn1 (ENSAPOG00000015798)	rab40c (ENSAPOG00000015787)	zp3c (ENSAPOG00000015759)	ENSAPOG00000015720 #10	CALHM1 (ENSAPOG00000015693) #21	zgc:175214 (ENSAPOG00000015672)	pdcd11 (ENSAPOG00000015629) #23	atp5md (ENSAPOG00000015614)	taf5 (ENSAPOG00000015600) #25	inab (ENSAPOG00000015546) #27	nt5c2b (ENSAPOG00000015537)	CNNM2 (ENSAPOG00000015454) #30	as3mt (ENSAPOG00000015417) #31	wbp1lb (ENSAPOG00000015408) #34	poll (ENSAPOG00000015387)	dpcd (ENSAPOG00000015370)	fgf8b (ENSAPOG00000015344)	slc2a15b (ENSAPOG00000015325)	lbx1b (ENSAPOG00000015260)	cenpk (ENSAPOG00000015249)
Bicolor damselfish	MODERN SPECIES	524	TMC7 (ENSSPAG00000018161)	ENSSPAG00000018131	gsg1l (ENSSPAG00000018097)	sec23b (ENSSPAG00000018017)	ccdc85al (ENSSPAG00000017984)	ENSSPAG00000017954	bcl11ab (ENSSPAG00000017925)	ENSSPAG00000017908	ENSSPAG00000017859	ENSSPAG00000017795	ENSSPAG00000017727	mettl26 (ENSSPAG00000017695)	wfikkn1 (ENSSPAG00000017678)	rab40c (ENSSPAG00000017649)	ENSSPAG00000017624	CALHM1 (ENSSPAG00000017617) #21	ENSSPAG00000017607 #10	zgc:175214 (ENSSPAG00000017594)	pdcd11 (ENSSPAG00000017558) #23	atp5md (ENSSPAG00000017543)	taf5 (ENSSPAG00000017530) #25	inab (ENSSPAG00000017483) #27	nt5c2b (ENSSPAG00000017444)	CNNM2 (ENSSPAG00000017422) #30
Cichlidae	ANCESTRAL SPECIES	3	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000154664.h.n.c.f	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Nile tilapia	MODERN SPECIES	18	xylt1 (ENSONIG00000018862)	NOMO1 (ENSONIG00000018861)	TMC7 (ENSONIG00000018860)	ENSONIG00000018859	gsg1l (ENSONIG00000031452)	sec23b (ENSONIG00000018857)	ccdc85al (ENSONIG00000035583)	ENSONIG00000037884	bcl11ab (ENSONIG00000034257)	ENSONIG00000018854	ENSONIG00000018852	ENSONIG00000018849	wfikkn1 (ENSONIG00000018847)	rab40c (ENSONIG00000018845)	ITPRIP (ENSONIG00000018844) #10	CALHM1 (ENSONIG00000036693) #21	zgc:175214 (ENSONIG00000042378)	zp3c (ENSONIG00000036390)	pdcd11 (ENSONIG00000018835) #23	atp5md (ENSONIG00000032430)	taf5 (ENSONIG00000018833) #25	inab (ENSONIG00000029868) #27	nt5c2b (ENSONIG00000018829)	CNNM2 (ENSONIG00000018828) #30	as3mt (ENSONIG00000018826) #31	wbp1lb (ENSONIG00000028546) #34	poll (ENSONIG00000018822)	dpcd (ENSONIG00000018819)	ENSONIG00000035113	fgf8b (ENSONIG00000031278)	slc2a15b (ENSONIG00000018816)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	5	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000154664.h.n.c.f.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Haplochromini	ANCESTRAL SPECIES	3	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000154664.h.n.c.f.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031.e.a	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Haplochromini_A	ANCESTRAL SPECIES	2	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000154664.h.n.c.f.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031.f	ENSGT00390000014031.e.a	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a
Haplochromini_B	ANCESTRAL SPECIES	23	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000154664.h.n.c.f.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031.f	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Eastern happy	MODERN SPECIES	18	ENSACLG00000017681	KLHL10 (ENSACLG00000017698)	KLHL10 (ENSACLG00000017719)	KLHL10 (ENSACLG00000017736)	bcl11ab (ENSACLG00000017768)	ENSACLG00000017791	ENSACLG00000017803	ENSACLG00000017827	ENSACLG00000017867	CCDC88A (ENSACLG00000017901)	mettl26 (ENSACLG00000018017)	wfikkn1 (ENSACLG00000018030)	rab40c (ENSACLG00000018049)	zp3c (ENSACLG00000018082)	ENSACLG00000018163 #10	CALHM1 (ENSACLG00000018194) #21	zgc:175214 (ENSACLG00000018202)	pdcd11 (ENSACLG00000018236) #23	atp5md (ENSACLG00000018433)	taf5 (ENSACLG00000018443) #25	inab (ENSACLG00000018488) #27	nt5c2b (ENSACLG00000018558)	CNNM2 (ENSACLG00000018611) #30	CNNM2 (ENSACLG00000018650) #30	as3mt (ENSACLG00000018658) #31	wbp1lb (ENSACLG00000018676) #34	poll (ENSACLG00000018740)	dpcd (ENSACLG00000018774)	fgf8b (ENSACLG00000018794)	poll (ENSACLG00000018810)	dpcd (ENSACLG00000018832)
Zebra mbuna	MODERN SPECIES	1109	gsg1l (ENSMZEG00005009370)	sec23b (ENSMZEG00005009323)	ccdc85al (ENSMZEG00005009305)	KLHL10 (ENSMZEG00005009287)	bcl11ab (ENSMZEG00005009275)	ENSMZEG00005009267	ENSMZEG00005009231	ENSMZEG00005009167	ENSMZEG00005009150	ENSMZEG00005009130	mettl26 (ENSMZEG00005009103)	wfikkn1 (ENSMZEG00005009090)	rab40c (ENSMZEG00005009079)	ENSMZEG00005009071 #10	zp3c (ENSMZEG00005009033)	CALHM1 (ENSMZEG00005009017) #21	zgc:175214 (ENSMZEG00005008984)	pdcd11 (ENSMZEG00005008949) #23	atp5md (ENSMZEG00005008937)	taf5 (ENSMZEG00005008902) #25	inab (ENSMZEG00005008834) #27	nt5c2b (ENSMZEG00005008782)	CNNM2 (ENSMZEG00005008760) #30	as3mt (ENSMZEG00005008714) #31	wbp1lb (ENSMZEG00005008705) #34	poll (ENSMZEG00005008677)	dpcd (ENSMZEG00005008653)	fgf8b (ENSMZEG00005008642)	slc2a15b (ENSMZEG00005008607)	lbx1b (ENSMZEG00005008600)	cenpk (ENSMZEG00005008583)
Burton s mouthbrooder	MODERN SPECIES	337	TMC7 (ENSHBUG00000020714)	ENSHBUG00000000922	gsg1l (ENSHBUG00000020653)	sec23b (ENSHBUG00000020617)	ccdc85al (ENSHBUG00000020542)	KLHL10 (ENSHBUG00000020535)	bcl11ab (ENSHBUG00000020505)	ENSHBUG00000020482	ENSHBUG00000020461	CCDC88A (ENSHBUG00000020445)	mettl26 (ENSHBUG00000020388)	wfikkn1 (ENSHBUG00000000620)	rab40c (ENSHBUG00000020360)	zp3c (ENSHBUG00000020330)	ENSHBUG00000020298 #10	CALHM1 (ENSHBUG00000020282) #21	zgc:175214 (ENSHBUG00000020259)	pdcd11 (ENSHBUG00000020226) #23	atp5md (ENSHBUG00000020211)	ENSHBUG00000020202 #25	inab (ENSHBUG00000020185) #27	nt5c2b (ENSHBUG00000020172)	CNNM2 (ENSHBUG00000020136) #30	as3mt (ENSHBUG00000020119) #31	wbp1lb (ENSHBUG00000020110) #34	poll (ENSHBUG00000020101)	dpcd (ENSHBUG00000020045)	fgf8b (ENSHBUG00000020004)	slc2a15b (ENSHBUG00000019972)	lbx1b (ENSHBUG00000019934)	cenpk (ENSHBUG00000019922)
Lyretail cichlid	MODERN SPECIES	308	ENSNBRG00000021154	gsg1l (ENSNBRG00000021235)	sec23b (ENSNBRG00000021264)	ccdc85al (ENSNBRG00000021328)	KLHL10 (ENSNBRG00000021359)	bcl11ab (ENSNBRG00000021368)	ENSNBRG00000021385	ENSNBRG00000021404	ENSNBRG00000021421	ENSNBRG00000021456	mettl26 (ENSNBRG00000021467)	wfikkn1 (ENSNBRG00000021480)	rab40c (ENSNBRG00000021497)	zp3c (ENSNBRG00000021522)	ENSNBRG00000021543 #10	CALHM1 (ENSNBRG00000021549) #21	zgc:175214 (ENSNBRG00000021568)	pdcd11 (ENSNBRG00000021596) #23	taf5 (ENSNBRG00000021737) #25	inab (ENSNBRG00000021780) #27	nt5c2b (ENSNBRG00000021814)	CNNM2 (ENSNBRG00000021863) #30	as3mt (ENSNBRG00000021942) #31	wbp1lb (ENSNBRG00000021999) #34	poll (ENSNBRG00000022014)	dpcd (ENSNBRG00000022033)	fgf8b (ENSNBRG00000022061)	slc2a15b (ENSNBRG00000022146)	lbx1b (ENSNBRG00000022180)	cenpk (ENSNBRG00000022205)	SMAP1 (ENSNBRG00000022222)
Midas cichlid	MODERN SPECIES	1113										CCDC88A (ENSACIG00000006263)	mettl26 (ENSACIG00000006328)	wfikkn1 (ENSACIG00000006350)	rab40c (ENSACIG00000006363)	zp3c (ENSACIG00000006384)	ENSACIG00000006405 #10	CALHM1 (ENSACIG00000006422) #21	zgc:175214 (ENSACIG00000006436)	ENSACIG00000006458 #23	ENSACIG00000006495	taf5 (ENSACIG00000006505) #25	inab (ENSACIG00000006532) #27	ENSACIG00000006583	nt5c2b (ENSACIG00000006589)	CNNM2 (ENSACIG00000006633) #30	as3mt (ENSACIG00000006747) #31	wbp1lb (ENSACIG00000006833) #34	poll (ENSACIG00000006868)	dpcd (ENSACIG00000006893)	fgf8b (ENSACIG00000006920)	slc2a15b (ENSACIG00000006971)	lbx1b (ENSACIG00000007010)
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Eupercaria	ANCESTRAL SPECIES	2	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01060000250262	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Fugu	MODERN SPECIES	8	xylt1 (ENSTRUG00000012035)	gsg1l (ENSTRUG00000013506)	sec23b (ENSTRUG00000013543)	ENSTRUG00000028639	ccdc85al (ENSTRUG00000013723)	ENSTRUG00000020515	bcl11ab (ENSTRUG00000021129)	ENSTRUG00000028126	ENSTRUG00000032516	ENSTRUG00000013931	mettl26 (ENSTRUG00000027506)	wfikkn1 (ENSTRUG00000031900)	rab40c (ENSTRUG00000002192)	ENSTRUG00000021079	ITPRIP (ENSTRUG00000027759) #10	CALHM1 (ENSTRUG00000014234) #21	zgc:175214 (ENSTRUG00000026105)	pdcd11 (ENSTRUG00000014291) #23	atp5md (ENSTRUG00000019734)	taf5 (ENSTRUG00000014486) #25	inab (ENSTRUG00000014528) #27	nt5c2b (ENSTRUG00000014556)	CNNM2 (ENSTRUG00000014689) #30	as3mt (ENSTRUG00000030244) #31	wbp1lb (ENSTRUG00000014761) #34	poll (ENSTRUG00000014779)	dpcd (ENSTRUG00000014821)	fgf8b (ENSTRUG00000022621)	ENSTRUG00000031732	slc2a15b (ENSTRUG00000014883)	lbx1b (ENSTRUG00000015003)
Tetraodon	MODERN SPECIES	10	rps15a (ENSTNIG00000012070)	xylt1 (ENSTNIG00000012071)	NOMO1 (ENSTNIG00000012072)	ENSTNIG00000002021	gsg1l (ENSTNIG00000012073)	sec23b (ENSTNIG00000012074)	ccdc85al (ENSTNIG00000012075)	bcl11ab (ENSTNIG00000012076)	ENSTNIG00000012077	ENSTNIG00000012078	ENSTNIG00000012079	mettl26 (ENSTNIG00000012080)	wfikkn1 (ENSTNIG00000012081)	rab40c (ENSTNIG00000012082)	ENSTNIG00000012083	CALHM1 (ENSTNIG00000012084) #21	pdcd11 (ENSTNIG00000012085) #23	taf5 (ENSTNIG00000012086) #25	inab (ENSTNIG00000012087) #27	nt5c2b (ENSTNIG00000012088)	ENSTNIG00000001542 #30	CNNM2 (ENSTNIG00000012089) #30	as3mt (ENSTNIG00000001399) #31	as3mt (ENSTNIG00000000132) #31	wbp1lb (ENSTNIG00000012090) #34	poll (ENSTNIG00000012091)	dpcd (ENSTNIG00000012092)	slc2a15b (ENSTNIG00000019369)	lbx1b (ENSTNIG00000019368)	cenpk (ENSTNIG00000000157)	SMAP1 (ENSTNIG00000019367)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Ballan wrasse	MODERN SPECIES	186	NOMO1 (ENSLBEG00000010922)	TMC7 (ENSLBEG00000010841)	ENSLBEG00000010773	gsg1l (ENSLBEG00000010727)	sec23b (ENSLBEG00000010643)	ccdc85al (ENSLBEG00000010619)	bcl11ab (ENSLBEG00000010596)	ENSLBEG00000010565	ENSLBEG00000010511	ENSLBEG00000010431	ENSLBEG00000010321	mettl26 (ENSLBEG00000010279)	wfikkn1 (ENSLBEG00000010249)	rab40c (ENSLBEG00000010218)	ENSLBEG00000010182 #10	CALHM1 (ENSLBEG00000010161) #21	zgc:175214 (ENSLBEG00000010140)	ENSLBEG00000009990 #23	atp5md (ENSLBEG00000009925)	taf5 (ENSLBEG00000009877) #25	inab (ENSLBEG00000009843) #27	nt5c2b (ENSLBEG00000009773)	CNNM2 (ENSLBEG00000009710) #30	as3mt (ENSLBEG00000009674) #31	wbp1lb (ENSLBEG00000009633) #34	poll (ENSLBEG00000009587)	dpcd (ENSLBEG00000009557)	fgf8b (ENSLBEG00000009512)	slc2a15b (ENSLBEG00000009474)	lbx1b (ENSLBEG00000009451)	cenpk (ENSLBEG00000009428)
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Perciformes	ANCESTRAL SPECIES	2	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Cottioidei	ANCESTRAL SPECIES	3	ENSGT00940000157381.c	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Lumpfish	MODERN SPECIES		gsg1l (ENSCLMG00005000874)	sec23b (ENSCLMG00005000849)	ccdc85al (ENSCLMG00005000833)	ENSCLMG00005000832	bcl11ab (ENSCLMG00005000830)	ENSCLMG00005000828	ENSCLMG00005000825	ENSCLMG00005000821	ENSCLMG00005000792	ENSCLMG00005000790	ENSCLMG00005000788	mettl26 (ENSCLMG00005000787)	wfikkn1 (ENSCLMG00005000786)	rab40c (ENSCLMG00005000785)	ENSCLMG00005000784 #10	CALHM1 (ENSCLMG00005000783) #21	zgc:175214 (ENSCLMG00005000782)	pdcd11 (ENSCLMG00005000779) #23	atp5md (ENSCLMG00005000778)	taf5 (ENSCLMG00005000736) #25	inab (ENSCLMG00005000727) #27	nt5c2b (ENSCLMG00005000335)	CNNM2 (ENSCLMG00005000165) #30	as3mt (ENSCLMG00005000078) #31	wbp1lb (ENSCLMG00005000058) #34	poll (ENSCLMG00005000053)	dpcd (ENSCLMG00005000050)	fgf8b (ENSCLMG00005000044)	slc2a15b (ENSCLMG00005000030)	lbx1b (ENSCLMG00005000027)	cenpk (ENSCLMG00005000017)
Stickleback	MODERN SPECIES	4	NOMO1 (ENSGACG00000019191)	TMC7 (ENSGACG00000019195)	TMC5 (ENSGACG00000019200)	gsg1l (ENSGACG00000019207)	sec23b (ENSGACG00000019209)	ccdc85al (ENSGACG00000019217)	ENSGACG00000019220	bcl11ab (ENSGACG00000019222)	ENSGACG00000019224	ENSGACG00000019228	ENSGACG00000019231	mettl26 (ENSGACG00000019235)	wfikkn1 (ENSGACG00000019237)	rab40c (ENSGACG00000019241)	ITPRIP (ENSGACG00000019243) #10	CALHM1 (ENSGACG00000019245) #21	zgc:175214 (ENSGACG00000019246)	ENSGACG00000019251 #23	ENSGACG00000019252	DDX5 (ENSGACG00000019254)	srp68 (ENSGACG00000019256)	evpla (ENSGACG00000019260)	ten1 (ENSGACG00000019266)	acox1 (ENSGACG00000019268)	RHBDF2 (ENSGACG00000019272)	aanat1 (ENSGACG00000019276)	ENSGACG00000019277	UBE2O (ENSGACG00000019278)	SPHK1 (ENSGACG00000019281)	cygb2 (ENSGACG00000019283)	ENSGACG00000019284
Perciformes_a	ANCESTRAL SPECIES		ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Channel bull blenny	MODERN SPECIES		NOMO1 (ENSCGOG00000001515)	TMC7 (ENSCGOG00000001382)	ENSCGOG00000001375	gsg1l (ENSCGOG00000001367)	sec23b (ENSCGOG00000000690)	ccdc85al (ENSCGOG00000000393)	bcl11ab (ENSCGOG00000000379)	ENSCGOG00000000370	ENSCGOG00000000366	ENSCGOG00000000280	mettl26 (ENSCGOG00000000234)	wfikkn1 (ENSCGOG00000000229)	rab40c (ENSCGOG00000000192)	zp3c (ENSCGOG00000000180)	ITPRIP (ENSCGOG00000000168) #10	CALHM1 (ENSCGOG00000000163) #21	zgc:175214 (ENSCGOG00000000156)	pdcd11 (ENSCGOG00000000129) #23	atp5md (ENSCGOG00000008688)	taf5 (ENSCGOG00000008661) #25	inab (ENSCGOG00000008659) #27	nt5c2b (ENSCGOG00000008287)	CNNM2 (ENSCGOG00000008265) #30	as3mt (ENSCGOG00000008221) #31	wbp1lb (ENSCGOG00000008213) #34	poll (ENSCGOG00000008203)	dpcd (ENSCGOG00000008201)	fgf8b (ENSCGOG00000008193)	slc2a15b (ENSCGOG00000007928)	lbx1b (ENSCGOG00000007915)	cenpk (ENSCGOG00000007910)
Pike perch	MODERN SPECIES	8	NOMO1 (ENSSLUG00000006362)	TMC7 (ENSSLUG00000006618)	ENSSLUG00000006663	gsg1l (ENSSLUG00000006694)	sec23b (ENSSLUG00000006756)	ccdc85al (ENSSLUG00000006822)	bcl11ab (ENSSLUG00000006832)	ENSSLUG00000006895	ENSSLUG00000006902	ENSSLUG00000006919	ENSSLUG00000006994	wfikkn1 (ENSSLUG00000007741)	rab40c (ENSSLUG00000007753)	zp3c (ENSSLUG00000007761)	ENSSLUG00000007773 #10	CALHM1 (ENSSLUG00000007787) #21	zgc:175214 (ENSSLUG00000007794)	pdcd11 (ENSSLUG00000007813) #23	atp5md (ENSSLUG00000007888)	taf5 (ENSSLUG00000007908) #25	inab (ENSSLUG00000008179) #27	nt5c2b (ENSSLUG00000008262)	CNNM2 (ENSSLUG00000009525) #30	as3mt (ENSSLUG00000009747) #31	wbp1lb (ENSSLUG00000009766) #34	poll (ENSSLUG00000009770)	dpcd (ENSSLUG00000009777)	fgf8b (ENSSLUG00000009782)	slc2a15b (ENSSLUG00000009795)	lbx1b (ENSSLUG00000009812)	cenpk (ENSSLUG00000009823)
Eupecaria_C	ANCESTRAL SPECIES	22	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	21	ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00940000155884.b
European seabass	MODERN SPECIES	20	ENSDLAG00005021790	ENSDLAG00005023465	ENSDLAG00005033289	ENSDLAG00005023526	sec23b (ENSDLAG00005023492)	bcl11ab (ENSDLAG00005028530)	ENSDLAG00005023533	ENSDLAG00005034174	ENSDLAG00005023539	ENSDLAG00005023542	ENSDLAG00005023583	ENSDLAG00005033770	ENSDLAG00005032709	zp3c (ENSDLAG00005024061)	ENSDLAG00005033739 #10	ENSDLAG00005024065 #21	pdcd11 (ENSDLAG00005024070) #23	zgc:175214 (ENSDLAG00005024067)	ENSDLAG00005024092	inab (ENSDLAG00005031136) #27	nt5c2b (ENSDLAG00005024147)	ENSDLAG00005024481 #30	wbp1lb (ENSDLAG00005024495) #34	poll (ENSDLAG00005024503)	dpcd (ENSDLAG00005024508)	fgf8b (ENSDLAG00005034123)	slc2a15b (ENSDLAG00005024529)	lbx1b (ENSDLAG00005026330)	ENSDLAG00005024602	krt94 (ENSDLAG00005024613)	krt98 (ENSDLAG00005029695)
Large yellow croaker	MODERN SPECIES	481	yme1l1b (ENSLCRG00005005523)	ENSLCRG00005005495	ENSLCRG00005005493	sec23b (ENSLCRG00005005478)	ENSLCRG00005005470	ccdc85al (ENSLCRG00005005468)	bcl11ab (ENSLCRG00005005467)	ENSLCRG00005005463	ENSLCRG00005005465	ENSLCRG00005005459	ENSLCRG00005005413	wfikkn1 (ENSLCRG00005005406)	rab40c (ENSLCRG00005005404)	zp3c (ENSLCRG00005005400)	ITPRIP (ENSLCRG00005005392) #10	CALHM1 (ENSLCRG00005005389) #21	zgc:175214 (ENSLCRG00005005387)	pdcd11 (ENSLCRG00005005379) #23	atp5md (ENSLCRG00005005378)	taf5 (ENSLCRG00005005317) #25	inab (ENSLCRG00005005315) #27	nt5c2b (ENSLCRG00005003843)	CNNM2 (ENSLCRG00005003820) #30	as3mt (ENSLCRG00005003804) #31	wbp1lb (ENSLCRG00005003802) #34	poll (ENSLCRG00005003801)	dpcd (ENSLCRG00005003799)	fgf8b (ENSLCRG00005003796)	slc2a15b (ENSLCRG00005003787)	lbx1b (ENSLCRG00005003783)	SMAP1 (ENSLCRG00005003780)
Gilthead seabream	MODERN SPECIES		COQ7 (ENSSAUG00010004884)	notum2 (ENSSAUG00010004881)	rps15a (ENSSAUG00010004874)	xylt1 (ENSSAUG00010004332)	NOMO1 (ENSSAUG00010003403)	ENSSAUG00010003389	gsg1l (ENSSAUG00010003387)	sec23b (ENSSAUG00010003354)	ccdc85al (ENSSAUG00010006234)	bcl11ab (ENSSAUG00010006232)	ENSSAUG00010006230	ENSSAUG00010005426	wfikkn1 (ENSSAUG00010005380)	rab40c (ENSSAUG00010005377)	ENSSAUG00010005374	CALHM1 (ENSSAUG00010005371) #21	ITPRIP (ENSSAUG00010005369) #10	zgc:175214 (ENSSAUG00010005365)	pdcd11 (ENSSAUG00010005292) #23	atp5md (ENSSAUG00010005272)	taf5 (ENSSAUG00010005046) #25	inab (ENSSAUG00010005042) #27	nt5c2b (ENSSAUG00010003314)	CNNM2 (ENSSAUG00010003267) #30	as3mt (ENSSAUG00010003260) #31	wbp1lb (ENSSAUG00010003253) #34	poll (ENSSAUG00010003250)	dpcd (ENSSAUG00010003248)	fgf8b (ENSSAUG00010003246)	slc2a15b (ENSSAUG00010003054)	lbx1b (ENSSAUG00010003024)
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Carangaria	ANCESTRAL SPECIES		ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b.tb.a	ENSGT00940000155103.a.b.tb.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Carangaria_A	ANCESTRAL SPECIES	24	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b.tb.a	ENSGT00940000155103.a.b.tb.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Seriola	ANCESTRAL SPECIES	11	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b.tb.a	ENSGT00940000155103.a.b.tb.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Greater amberjack	MODERN SPECIES	84	NOMO1 (ENSSDUG00000020950)	TMC7 (ENSSDUG00000020998)	ENSSDUG00000021011	gsg1l (ENSSDUG00000021034)	sec23b (ENSSDUG00000021042)	ccdc85al (ENSSDUG00000021080)	bcl11ab (ENSSDUG00000021083)	ENSSDUG00000021103	ENSSDUG00000021168	ENSSDUG00000021198	mettl26 (ENSSDUG00000021237)	wfikkn1 (ENSSDUG00000021248)	rab40c (ENSSDUG00000021256)	zp3c (ENSSDUG00000021264)	ENSSDUG00000021274 #10	CALHM1 (ENSSDUG00000021282) #21	zgc:175214 (ENSSDUG00000021288)	pdcd11 (ENSSDUG00000021302) #23	atp5md (ENSSDUG00000021405)	taf5 (ENSSDUG00000021414) #25	inab (ENSSDUG00000021437) #27	nt5c2b (ENSSDUG00000021446)	CNNM2 (ENSSDUG00000021457) #30	as3mt (ENSSDUG00000021471) #31	wbp1lb (ENSSDUG00000021479) #34	poll (ENSSDUG00000021485)	dpcd (ENSSDUG00000021500)	fgf8b (ENSSDUG00000021510)	slc2a15b (ENSSDUG00000000101)	lbx1b (ENSSDUG00000000191)	cenpk (ENSSDUG00000000210)
Yellowtail amberjack	MODERN SPECIES	3041	TMC7 (ENSSLDG00000009723)	ENSSLDG00000009788	gsg1l (ENSSLDG00000009833)	sec23b (ENSSLDG00000009853)	ccdc85al (ENSSLDG00000009906)	bcl11ab (ENSSLDG00000009922)	ENSSLDG00000009945	ENSSLDG00000009967	ENSSLDG00000010002	ENSSLDG00000010045	mettl26 (ENSSLDG00000010086)	wfikkn1 (ENSSLDG00000010109)	rab40c (ENSSLDG00000010124)	zp3c (ENSSLDG00000010156)	ENSSLDG00000010181 #10	CALHM1 (ENSSLDG00000010196) #21	zgc:175214 (ENSSLDG00000010213)	pdcd11 (ENSSLDG00000010228) #23	ENSSLDG00000010269	taf5 (ENSSLDG00000010283) #25	inab (ENSSLDG00000010328) #27	nt5c2b (ENSSLDG00000010353)	CNNM2 (ENSSLDG00000010430) #30	as3mt (ENSSLDG00000010514) #31	wbp1lb (ENSSLDG00000010555) #34	poll (ENSSLDG00000010575)	dpcd (ENSSLDG00000010604)	fgf8b (ENSSLDG00000010661)	slc2a15b (ENSSLDG00000010809)	lbx1b (ENSSLDG00000010867)	cenpk (ENSSLDG00000010881)
Barramundi perch	MODERN SPECIES	123	NOMO1 (ENSLCAG00010003026)	ENSLCAG00010003459	TMC5 (ENSLCAG00010003468)	gsg1l (ENSLCAG00010003477)	sec23b (ENSLCAG00010003543)	ccdc85al (ENSLCAG00010003669)	bcl11ab (ENSLCAG00010003670)	ENSLCAG00010003673	ENSLCAG00010003677	ENSLCAG00010003684	ENSLCAG00010003699	wfikkn1 (ENSLCAG00010003719)	rab40c (ENSLCAG00010003725)	zp3c (ENSLCAG00010003728)	ENSLCAG00010003731 #10	CALHM1 (ENSLCAG00010003733) #21	zgc:175214 (ENSLCAG00010003737)	pdcd11 (ENSLCAG00010003747) #23	atp5md (ENSLCAG00010003750)	taf5 (ENSLCAG00010003754) #25	inab (ENSLCAG00010003759) #27	nt5c2b (ENSLCAG00010003780)	CNNM2 (ENSLCAG00010003833) #30	as3mt (ENSLCAG00010003837) #31	wbp1lb (ENSLCAG00010003854) #34	poll (ENSLCAG00010003869)	dpcd (ENSLCAG00010003873)	fgf8b (ENSLCAG00010003879)	slc2a15b (ENSLCAG00010003888)	lbx1b (ENSLCAG00010003893)	cenpk (ENSLCAG00010003895)
Pleuronectoidei	ANCESTRAL SPECIES	22	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b.tb.a	ENSGT00940000155103.a.b.tb.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243	ENSGT00940000155884.b
Tongue sole	MODERN SPECIES	19	ENSCSEG00000010398	gsg1l (ENSCSEG00000010419)	sec23b (ENSCSEG00000010437)	ccdc85al (ENSCSEG00000010466)	ENSCSEG00000010483	ENSCSEG00000010503	bcl11ab (ENSCSEG00000010518)	ENSCSEG00000010524	ENSCSEG00000010535	ENSCSEG00000010573	mettl26 (ENSCSEG00000010677)	wfikkn1 (ENSCSEG00000010670)	rab40c (ENSCSEG00000010690)	zp3c (ENSCSEG00000010697)	ITPRIP (ENSCSEG00000010709) #10	CALHM1 (ENSCSEG00000010717) #21	zgc:175214 (ENSCSEG00000010727)	pdcd11 (ENSCSEG00000010739) #23	taf5 (ENSCSEG00000010757) #25	atp5md (ENSCSEG00000010771)	ENSCSEG00000010782	inab (ENSCSEG00000010786) #27	nt5c2b (ENSCSEG00000010800)	ENSCSEG00000010915	slkb (ENSCSEG00000010926) #16	ENSCSEG00000010943	dtd1 (ENSCSEG00000010948)	ENSCSEG00000010955	as3mt (ENSCSEG00000010967) #31	CNNM2 (ENSCSEG00000010981) #30	stn1 (ENSCSEG00000011015) #17
Turbot	MODERN SPECIES	20	ENSSMAG00000007159	ENSSMAG00000007123	ENSSMAG00000007086	ENSSMAG00000007064	sec23b (ENSSMAG00000007010)	ccdc85al (ENSSMAG00000006997)	bcl11ab (ENSSMAG00000027471)	ENSSMAG00000006850	ENSSMAG00000032558	ENSSMAG00000021720	ENSSMAG00000006735	ENSSMAG00000006701	ENSSMAG00000006688	zp3c (ENSSMAG00000006645)	ENSSMAG00000006683 #10	CALHM1 (ENSSMAG00000006637) #21	zgc:175214 (ENSSMAG00000033852)	pdcd11 (ENSSMAG00000006612) #23	atp5md (ENSSMAG00000006592)	taf5 (ENSSMAG00000006561) #25	inab (ENSSMAG00000006549) #27	nt5c2b (ENSSMAG00000006511)	ENSSMAG00000006481 #30	as3mt (ENSSMAG00000006450) #31	wbp1lb (ENSSMAG00000021668) #34	dpcd (ENSSMAG00000006362)	fgf8b (ENSSMAG00000006337)	slc2a15b (ENSSMAG00000006312)	poll (ENSSMAG00000006388)	lbx1b (ENSSMAG00000036098)	cenpk (ENSSMAG00000006290)
Anabantaria	ANCESTRAL SPECIES	1	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Zig-zag eel	MODERN SPECIES		ENSMAMG00000009227	sec23b (ENSMAMG00000009247)	ccdc85al (ENSMAMG00000009311)	bcl11ab (ENSMAMG00000009337)	ENSMAMG00000009343	ENSMAMG00000024799	ENSMAMG00000009348	ENSMAMG00000009366	ENSMAMG00000027028	ENSMAMG00000009394	ENSMAMG00000009450	ENSMAMG00000009460	ENSMAMG00000009467	zp3c (ENSMAMG00000009483)	ENSMAMG00000009508 #10	CALHM1 (ENSMAMG00000009513) #21	zgc:175214 (ENSMAMG00000009533)	pdcd11 (ENSMAMG00000009572) #23	atp5md (ENSMAMG00000009637)	taf5 (ENSMAMG00000009605) #25	inab (ENSMAMG00000009645) #27	nt5c2b (ENSMAMG00000009657)	ENSMAMG00000009701 #30	as3mt (ENSMAMG00000009749) #31	wbp1lb (ENSMAMG00000009771) #34	poll (ENSMAMG00000009780)	dpcd (ENSMAMG00000009826)	fgf8b (ENSMAMG00000024638)	lbx1b (ENSMAMG00000010182)	cenpk (ENSMAMG00000010189)	ENSMAMG00000010206
Anabantoidei	ANCESTRAL SPECIES		ENSGT00390000000089	ENSGT01050000244894.a.a.b	ENSGT01050000244894.b.a	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000156983.a.a	ENSGT00940000155103.a.b	ENSGT00950000183059.b.a.b.r	ENSGT00940000179440	ENSGT00940000155559.a.b	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.a.a	ENSGT00390000006243
Siamese fighting fish	MODERN SPECIES		NOMO1 (ENSBSLG00000003503)	TMC7 (ENSBSLG00000003507)	ENSBSLG00000003509	gsg1l (ENSBSLG00000003567)	sec23b (ENSBSLG00000003816)	ccdc85al (ENSBSLG00000004033)	bcl11ab (ENSBSLG00000004045)	ENSBSLG00000004057	ENSBSLG00000004065	ENSBSLG00000004106	ENSBSLG00000004221	wfikkn1 (ENSBSLG00000004588)	rab40c (ENSBSLG00000004590)	zp3c (ENSBSLG00000004592)	ITPRIP (ENSBSLG00000004596) #10	CALHM1 (ENSBSLG00000004601) #21	zgc:175214 (ENSBSLG00000004607)	pdcd11 (ENSBSLG00000004611) #23	ENSBSLG00000004614	taf5 (ENSBSLG00000004941) #25	inab (ENSBSLG00000005764) #27	nt5c2b (ENSBSLG00000005814)	CNNM2 (ENSBSLG00000006172) #30	as3mt (ENSBSLG00000006175) #31	wbp1lb (ENSBSLG00000006278) #34	poll (ENSBSLG00000006326)	dpcd (ENSBSLG00000006378)	fgf8b (ENSBSLG00000006445)	slc2a15b (ENSBSLG00000006540)	lbx1b (ENSBSLG00000006829)	cenpk (ENSBSLG00000006834)
Climbing perch	MODERN SPECIES		ENSATEG00000021370	ENSATEG00000021339	sec23b (ENSATEG00000021311)	ccdc85al (ENSATEG00000021288)	ENSATEG00000021281	bcl11ab (ENSATEG00000021273)	ENSATEG00000025711	ENSATEG00000029744	ENSATEG00000021227	ENSATEG00000027745	ENSATEG00000021160	ENSATEG00000021126	ENSATEG00000021114	zp3c (ENSATEG00000021096)	ENSATEG00000021087 #10	CALHM1 (ENSATEG00000021082) #21	zgc:175214 (ENSATEG00000026648)	pdcd11 (ENSATEG00000021043) #23	atp5md (ENSATEG00000021023)	taf5 (ENSATEG00000021013) #25	inab (ENSATEG00000020981) #27	nt5c2b (ENSATEG00000020922)	ENSATEG00000020907 #30	as3mt (ENSATEG00000020869) #31	wbp1lb (ENSATEG00000029225) #34	poll (ENSATEG00000020832)	dpcd (ENSATEG00000020802)	fgf8b (ENSATEG00000028269)	slc2a15b (ENSATEG00000020655)	lbx1b (ENSATEG00000020642)	cenpk (ENSATEG00000020632)
Cod	MODERN SPECIES	16	ENSGMOG00000002322	ENSGMOG00000002365	ENSGMOG00000002395	ENSGMOG00000002414	ENSGMOG00000030572	ENSGMOG00000032471	ENSGMOG00000028303	ENSGMOG00000033452	ENSGMOG00000012279	ENSGMOG00000033147	ENSGMOG00000004570	ENSGMOG00000027881	ENSGMOG00000033099	ENSGMOG00000025929	ENSGMOG00000033307	CALHM1 (ENSGMOG00000033306) #21	zgc:175214 (ENSGMOG00000027235)	pdcd11 (ENSGMOG00000004186) #23	taf5 (ENSGMOG00000004274) #25	LDB1 (ENSGMOG00000019523)	ENSGMOG00000019516	KCNIP2 (ENSGMOG00000019514)	jupa (ENSGMOG00000019511)	ENSGMOG00000019513	ENSGMOG00000030774	ENSGMOG00000037060	ENSGMOG00000031187	krt98 (ENSGMOG00000012962)	krt94 (ENSGMOG00000014102)	ENSGMOG00000025967	ENSGMOG00000000026
Protacanthopterygii	ANCESTRAL SPECIES	142										ENSGT00940000155559.a.b	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00940000164611.b	ENSGT00390000006243
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	1640															ENSGT01050000244827.D.b.b.b.d #10	ENSGT01030000234610.b.a.b.a.i #21
Salmoninae_a	ANCESTRAL SPECIES	569															ENSGT01050000244827.D.b.b.b.d #10	ENSGT01030000234610.b.a.b.a.i #21
Salmo	ANCESTRAL SPECIES	141	ENSGT01050000244894.a.a.b.k	ENSGT01050000244894.b.a.g.a.a	ENSGT01050000244814.a.a.a.a.a.b.c	ENSGT00390000006916.c.f	ENSGT00940000157361.a.i	ENSGT00940000163496.a.v.b.a.c	ENSGT00940000156983.a.a.o	ENSGT00940000155103.a.b.jd.b	ENSGT00950000183059.b.a.b.r.d.a	ENSGT00940000155559.a.b.p	ENSGT00390000010750.a.q.d	ENSGT00940000167090.d	ENSGT00940000158979.e.b.a	ENSGT01030000234567.A.a.a.a.a.b.f.c	ENSGT01050000244827.D.b.b.b.d #10	ENSGT01030000234610.b.a.b.a.i #21
Atlantic salmon	MODERN SPECIES	3	ENSSSAG00000009462	ENSSSAG00000095200	ENSSSAG00000104005	ENSSSAG00000083114	ENSSSAG00000086930	ENSSSAG00000087183	ENSSSAG00000030374	ENSSSAG00000106547	ENSSSAG00000095986	ENSSSAG00000015438	ENSSSAG00000004172	ENSSSAG00000004177	ENSSSAG00000115135	zp3c (ENSSSAG00000073611)	ENSSSAG00000073615 #10	CALHM1 (ENSSSAG00000116082) #21	zgc:175214 (ENSSSAG00000103223)	pdcd11 (ENSSSAG00000004225) #23	usmg5 (ENSSSAG00000004194)	taf5 (ENSSSAG00000004352) #25	ENSSSAG00000095552	nt5c2b (ENSSSAG00000000687)	inab (ENSSSAG00000104505) #27	ENSSSAG00000008311 #30	as3mt (ENSSSAG00000008326) #31	wbp1lb (ENSSSAG00000113488) #34	poll (ENSSSAG00000000450)	dpcd (ENSSSAG00000008388)	fgf8b (ENSSSAG00000008393)	ENSSSAG00000073607	ENSSSAG00000094147
River trout	MODERN SPECIES	5	sec23b (ENSSTUG00000034661)	ccdc85al (ENSSTUG00000034612)	ENSSTUG00000034599	ENSSTUG00000034588	bcl11ab (ENSSTUG00000034581)	ENSSTUG00000034567	ENSSTUG00000034534	ENSSTUG00000034475	ENSSTUG00000032410	mettl26 (ENSSTUG00000032286)	wfikkn1 (ENSSTUG00000032281)	RAB40C (ENSSTUG00000032265)	ENSSTUG00000032260	zp3c (ENSSTUG00000032247)	ITPRIP (ENSSTUG00000032233) #10	CALHM1 (ENSSTUG00000032228) #21	zgc:175214 (ENSSTUG00000032184)	pdcd11 (ENSSTUG00000031605) #23	atp5md (ENSSTUG00000031569)	taf5 (ENSSTUG00000031238) #25	inab (ENSSTUG00000031227) #27	nt5c2b (ENSSTUG00000030969)	CNNM2 (ENSSTUG00000030920) #30	wbp1lb (ENSSTUG00000030911) #34	poll (ENSSTUG00000030901)	dpcd (ENSSTUG00000030884)	fgf8b (ENSSTUG00000030879)	ENSSTUG00000030833	lbx1b (ENSSTUG00000030824)	cenpk (ENSSTUG00000030796)	ENSSTUG00000030783
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT01050000244894.b.a.g.b.b.a	ENSGT01050000244894.b.a.g.a.b.b	ENSGT01050000244814.a.a.a.a.a.b.c	ENSGT00390000006916.c.h	ENSGT00940000157361.a.l	ENSGT00940000163496.a.v.b.a.b	ENSGT00940000156983.a.a.p.b	ENSGT00940000155103.a.b.jd.c	ENSGT00950000183059.b.a.b.r.d.a.b	ENSGT00940000155559.a.b.p	ENSGT00390000010750.a.r	ENSGT00940000167090.e	ENSGT00940000158979.e.b.d	ENSGT01030000234567.A.a.a.a.a.b.f.f	ENSGT01050000244827.D.b.b.b.d #10	ENSGT01030000234610.b.a.b.a.i #21	ENSGT00940000166025.a.f	ENSGT00390000012228.m #23	ENSGT00940000166377.g	ENSGT00940000153342.a.f #25	ENSGT00940000154418.a.a.b.c.b #27	ENSGT00390000001742.a.n #31	ENSGT00950000183109.c.a.a.a.b.b.a #34	ENSGT00940000158515.k.a	ENSGT00390000014031.j	ENSGT00940000159518.b.h	ENSGT00940000164095.b.a	ENSGT00940000164611.b.c.a	ENSGT00390000006243.n	ENSGT00940000155884.b.c	ENSGT00940000155134.z.e
Oncorhynchus_a	ANCESTRAL SPECIES	51	ENSGT01050000244894.a.a.b.j	ENSGT01050000244894.b.a.g.b.b.a	ENSGT01050000244814.a.a.a.a.a.b.c	ENSGT00390000006916.c.h	ENSGT00940000157361.a.l	ENSGT00940000163496.a.v.b.a.b	ENSGT00940000156983.a.a.p.a.b	ENSGT00940000156983.a.a.p.a.a	ENSGT00940000155103.a.b.kd.b	ENSGT00950000183059.b.a.b.r.d.a.b	ENSGT00940000155559.a.b.p	ENSGT00390000010750.a.q.b	ENSGT00940000167090.e	ENSGT00940000158979.e.b.d	ENSGT01030000234567.A.a.a.a.a.b.f.f	ENSGT01030000234610.b.a.b.a.i #21	ENSGT00940000166025.a.f	ENSGT00390000012228.m #23	ENSGT00940000166377.g	ENSGT00940000153342.a.f #25	ENSGT00940000154418.a.a.b.c.b #27	ENSGT00940000163289.b.a.a.e	ENSGT00940000159034.r #30	ENSGT00390000001742.a.n #31	ENSGT00950000183109.c.a.a.a.b.b.a #34	ENSGT00940000158515.k.a	ENSGT00390000014031.j	ENSGT00940000159518.b.h	ENSGT00940000164095.b.a	ENSGT00940000164611.b.c.a	ENSGT00390000006243.n
Coho salmon	MODERN SPECIES		ENSOKIG00005000423	ENSOKIG00005000412	ENSOKIG00005000408	ENSOKIG00005000400	ENSOKIG00005000390	ENSOKIG00005000280	METTL26 (ENSOKIG00005000193)	wfikkn1 (ENSOKIG00005000184)	RAB40C (ENSOKIG00005000178)	zp3c (ENSOKIG00005000171)	ENSOKIG00005000164	zp3c (ENSOKIG00005000155)	ENSOKIG00005000146	zp3c (ENSOKIG00005000136)	ENSOKIG00005000126	CALHM1 (ENSOKIG00005000061) #21	zgc:175214 (ENSOKIG00005000032)	pdcd11 (ENSOKIG00005035428) #23	atp5md (ENSOKIG00005035336)	taf5 (ENSOKIG00005034921) #25	inab (ENSOKIG00005034898) #27	nt5c2b (ENSOKIG00005034097)	CNNM2 (ENSOKIG00005034003) #30	as3mt (ENSOKIG00005033893) #31	wbp1lb (ENSOKIG00005033879) #34	poll (ENSOKIG00005033862)	dpcd (ENSOKIG00005033839)	fgf8b (ENSOKIG00005033833)	ENSOKIG00005033829	ENSOKIG00005033542	lbx1b (ENSOKIG00005033488)
Chinook salmon	MODERN SPECIES	11	ENSOTSG00005004457	ENSOTSG00005003194	TMC7 (ENSOTSG00005003068)	TMC5 (ENSOTSG00005003055)	gsg1l (ENSOTSG00005003027)	sec23b (ENSOTSG00005002939)	ENSOTSG00005002911	ENSOTSG00005002868	ENSOTSG00005002858	ENSOTSG00005002315	ENSOTSG00005002278	mettl26 (ENSOTSG00005002263)	wfikkn1 (ENSOTSG00005002262)	RAB40C (ENSOTSG00005002259)	zp3c (ENSOTSG00005002257)	ENSOTSG00005002253 #21	zgc:175214 (ENSOTSG00005002249)	pdcd11 (ENSOTSG00005002044) #23	atp5md (ENSOTSG00005002029)	inab (ENSOTSG00005002024) #27	nt5c2b (ENSOTSG00005001590)	ENSOTSG00005001579	CNNM2 (ENSOTSG00005001577) #30	as3mt (ENSOTSG00005001433) #31	wbp1lb (ENSOTSG00005001429) #34	poll (ENSOTSG00005001427)	dpcd (ENSOTSG00005001424)	fgf8b (ENSOTSG00005001420)	emp1 (ENSOTSG00005001417)	f8a (ENSOTSG00005001414)	si:ch211-243a20.3 (ENSOTSG00005001412)
Salmoninae	ANCESTRAL SPECIES	64	ENSGT01050000244894.b.a.g.b.b.b	ENSGT01050000244814.a.a.a.a.a.b	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000163496.a.v.b.a	ENSGT00940000156983.a.a.p.a.b	ENSGT00940000156983.a.a.p.a.a	ENSGT00940000155103.a.b.kd.b	ENSGT00950000183059.b.a.b.r.c	ENSGT00940000155559.a.b.o	ENSGT00390000010750.a	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.c #10	ENSGT01030000234610.b.a.b.a.j #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.h	ENSGT00940000153342.a.e.a.b #25	ENSGT00940000166377.g	ENSGT00940000153342.a.f #25	ENSGT00940000154418.a.a.b.c.b #27	ENSGT00940000163289.b.a.a.f	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b.b #34	ENSGT00940000158515.l	ENSGT00950000183109.c.a.a.a.b.a.a #34	ENSGT00940000158515.k.a	ENSGT00390000014031
Huchen	DUPLICATION
Huchen	MODERN SPECIES	1870						ENSHHUG00000011578	ENSHHUG00000011657	ENSHHUG00000011662	ENSHHUG00000011666	ENSHHUG00000011669	mettl26 (ENSHHUG00000011781)	wfikkn1 (ENSHHUG00000011786)	RAB40C (ENSHHUG00000011790)	zp3c (ENSHHUG00000011824)	ITPRIP (ENSHHUG00000011834) #10	CALHM1 (ENSHHUG00000011838) #21	zgc:175214 (ENSHHUG00000011842)	pdcd11 (ENSHHUG00000011861) #23	atp5md (ENSHHUG00000011966)	ENSHHUG00000011981 #25
Huchen	MODERN SPECIES	1587				ENSHHUG00000031959	ENSHHUG00000031962	ENSHHUG00000031969	ENSHHUG00000031975	ENSHHUG00000031979	ENSHHUG00000031987	ENSHHUG00000032002	mettl26 (ENSHHUG00000032005)	wfikkn1 (ENSHHUG00000032012)	RAB40C (ENSHHUG00000032014)	ENSHHUG00000032025	ENSHHUG00000032037 #10	CALHM1 (ENSHHUG00000032040) #21	zgc:175214 (ENSHHUG00000032045)	pdcd11 (ENSHHUG00000032051) #23	atp5md (ENSHHUG00000032093)	taf5 (ENSHHUG00000032095) #25	inab (ENSHHUG00000032102) #27	nt5c2b (ENSHHUG00000032688)	ENSHHUG00000032750 #30
Salmoninae_a	ANCESTRAL SPECIES	33	ENSGT01050000244814.a.a.a.a.a.b.c	ENSGT00390000006916.c	ENSGT00940000157361.a	ENSGT00940000163496.a.v.b.a	ENSGT00940000156983.a.a.p.b	ENSGT00940000155103.a.b.jd	ENSGT00950000183059.b.a.b.r.d.a	ENSGT00940000155559.a.b.p	ENSGT00390000010750.a.r	ENSGT00940000155559.a.b.o	ENSGT00390000010750.a.q	ENSGT00940000167090	ENSGT00940000158979.e.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.c #10	ENSGT01030000234610.b.a.b.a.j #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.h	ENSGT00940000153342.a.e.a.b #25	ENSGT00940000166377.g	ENSGT00940000153342.a.f #25	ENSGT00940000154418.a.a.b.c.b #27	ENSGT00940000163289.b.a.a.e	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b.b #34	ENSGT00940000158515.k.a	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b.a
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT01050000244894.a.a.b.i	ENSGT01050000244894.b.a.g.a.b.a	ENSGT01050000244894.b.a.g.b.b.b	ENSGT01050000244814.a.a.a.a.a.b.d	ENSGT00390000006916.c.g	ENSGT00940000157361.a.k	ENSGT00940000163496.a.v.b.a.a	ENSGT00940000155103.a.b.jd.d	ENSGT00950000183059.b.a.b.r.d.b	ENSGT00940000155559.a.b.o	ENSGT00390000010750.a.q	ENSGT00940000167090.f	ENSGT00940000158979.e.b.c	ENSGT01030000234567.A.a.a.a.a.b.f.e	ENSGT01050000244827.D.b.b.b.c #10	ENSGT01030000234610.b.a.b.a.j #21	ENSGT00940000166025.a.e	ENSGT00390000012228.n #23	ENSGT00940000166377.h	ENSGT00940000153342.a.e.b #25	ENSGT00940000154418.a.a.b.c.a #27	ENSGT00940000163289.b.a.a.f	ENSGT00940000159034 #30	ENSGT00390000001742.a.m #31	ENSGT00950000183109.c.a.a.a.b.b.b #34	ENSGT00940000158515.l	ENSGT00390000014031.i	ENSGT00940000159518.b.g	ENSGT00940000164095.b.b	ENSGT00940000164611.b.c.b	ENSGT00390000006243.m
Oncorhynchus_a	ANCESTRAL SPECIES	38	ENSGT00390000000089.e.a	ENSGT01050000244894.a.a.b.i	ENSGT01050000244894.b.a.g.b.b.b	ENSGT01050000244814.a.a.a.a.a.b.d	ENSGT00390000006916.c.g	ENSGT00940000157361.a.k	ENSGT00940000163496.a.v.b.a.a	ENSGT00940000155103.a.b.jd.d	ENSGT00950000183059.b.a.b.r.d.a.a	ENSGT00940000155559.a.b.o	ENSGT00390000010750.a.q.a	ENSGT00940000167090.f	ENSGT00940000158979.e.b.c	ENSGT01030000234567.A.a.a.a.a.b.f.e	ENSGT01050000244827.D.b.b.b.c #10	ENSGT01030000234610.b.a.b.a.j #21	ENSGT00940000166025.a.e	ENSGT00390000012228.n #23	ENSGT00940000166377.h	ENSGT00940000154418.a.a.b.d #27	ENSGT00940000163289.b.a.a.f	ENSGT00940000159034.q.a #30	ENSGT00390000001742.a.m #31	ENSGT00950000183109.c.a.a.a.b.b.b #34	ENSGT00940000158515.l.b	ENSGT00940000158515.k.b	ENSGT00390000014031.i	ENSGT00940000158515.l.a	ENSGT00940000159518.b.g	ENSGT00940000164095.b.b	ENSGT00940000164611.b.c.b
Chinook salmon	MODERN SPECIES	25	xylt1 (ENSOTSG00005046714)	ENSOTSG00005046715	ENSOTSG00005046719	ENSOTSG00005046722	ccdc85al (ENSOTSG00005046723)	sec23b (ENSOTSG00005046724)	ENSOTSG00005046733	ENSOTSG00005046735	ENSOTSG00005046736	ENSOTSG00005046740	mettl26 (ENSOTSG00005046747)	wfikkn1 (ENSOTSG00005046748)	RAB40C (ENSOTSG00005046750)	zp3c (ENSOTSG00005046751)	ENSOTSG00005046752 #10	CALHM1 (ENSOTSG00005046753) #21	zgc:175214 (ENSOTSG00005046754)	pdcd11 (ENSOTSG00005046755) #23	atp5md (ENSOTSG00005046758)	taf5 (ENSOTSG00005046760) #25	ENSOTSG00005046763	inab (ENSOTSG00005046765) #27	nt5c2b (ENSOTSG00005046766)	CNNM2 (ENSOTSG00005046767) #30	as3mt (ENSOTSG00005046768) #31	wbp1lb (ENSOTSG00005046806) #34	poll (ENSOTSG00005046807)	dpcd (ENSOTSG00005046810)	ENSOTSG00005046811	fgf8b (ENSOTSG00005046812)	dtd1 (ENSOTSG00005046814)
Coho salmon	MODERN SPECIES	12	sec23b (ENSOKIG00005028130)	ENSOKIG00005028121	ccdc85al (ENSOKIG00005028113)	ENSOKIG00005028086	bcl11ab (ENSOKIG00005028055)	ENSOKIG00005028045	ENSOKIG00005028038	ENSOKIG00005027941	ENSOKIG00005027884	ENSOKIG00005027840	mettl26 (ENSOKIG00005027834)	ENSOKIG00005027822	RAB40C (ENSOKIG00005027801)	zp3c (ENSOKIG00005027791)	ITPRIP (ENSOKIG00005027784) #10	CALHM1 (ENSOKIG00005027776) #21	zgc:175214 (ENSOKIG00005027745)	pdcd11 (ENSOKIG00005027405) #23	atp5md (ENSOKIG00005027353)	taf5 (ENSOKIG00005027198) #25	ENSOKIG00005027173	inab (ENSOKIG00005027163) #27	nt5c2b (ENSOKIG00005026543)	CNNM2 (ENSOKIG00005026462) #30	as3mt (ENSOKIG00005026319) #31	wbp1lb (ENSOKIG00005026288) #34	poll (ENSOKIG00005026221)	ENSOKIG00005026202	dpcd (ENSOKIG00005026181)	fgf8b (ENSOKIG00005026139)	ENSOKIG00005025752
Rainbow trout	MODERN SPECIES	4	ccdc85al (ENSOMYG00000024651)	ENSOMYG00000024617	ENSOMYG00000076212	ENSOMYG00000024604	ENSOMYG00000075901	ENSOMYG00000027494	ENSOMYG00000027526	ENSOMYG00000027606	ENSOMYG00000027663	ENSOMYG00000027671	ENSOMYG00000052288	ENSOMYG00000027700	ENSOMYG00000075555 #10	zp3c (ENSOMYG00000061831)	ENSOMYG00000027713 #10	CALHM1 (ENSOMYG00000027719) #21	zgc:175214 (ENSOMYG00000027731)	pdcd11 (ENSOMYG00000027938) #23	atp5md (ENSOMYG00000028298)	taf5 (ENSOMYG00000028324) #25	inab (ENSOMYG00000028395) #27	nt5c2b (ENSOMYG00000029057)	ENSOMYG00000030734 #30	as3mt (ENSOMYG00000030751) #31	wbp1lb (ENSOMYG00000030780) #34	poll (ENSOMYG00000030792)	dpcd (ENSOMYG00000030819)	fgf8b (ENSOMYG00000003927)	ENSOMYG00000030866	lbx1b (ENSOMYG00000030905)	cenpk (ENSOMYG00000030919)
Salmo	ANCESTRAL SPECIES	37	ENSGT01050000244894.b.a.g.b.a	ENSGT01050000244814.a.a.a.a.a.b.d	ENSGT00390000006916.c.e	ENSGT00940000157361.a.j	ENSGT00940000163496.a.v.b.a.d.a	ENSGT00940000156983.a.a.p.b	ENSGT00940000155103.a.b.jd.a	ENSGT00940000155103.a.b.kd.a	ENSGT00950000183059.b.a.b.r.c	ENSGT00940000155559.a.b.o.a	ENSGT00390000010750.a.q.c	ENSGT00940000167090.c	ENSGT00940000158979.e.b.b	ENSGT01030000234567.A.a.a.a.a.b.f.d	ENSGT01050000244827.D.b.b.b.c #10	ENSGT01030000234610.b.a.b.a.j #21	ENSGT00940000166025.a	ENSGT00390000012228.l #23	ENSGT00940000166377.h	ENSGT00940000153342.a.f #25	ENSGT00940000153342.a.e.a.b #25	ENSGT00940000154418.a.a.b.c.b #27	ENSGT00940000163289.b.a.a.e	ENSGT00940000159034.t #30	ENSGT00950000183109.c.a.a.a.b.a.a #34	ENSGT00940000158515.k.a	ENSGT00390000014031.l	ENSGT00940000159518.b.f	ENSGT00940000164095.b.a.a	ENSGT00940000164611.b.a	ENSGT00390000006243.k
River trout	MODERN SPECIES	31	ENSSTUG00000048229	gsg1l (ENSSTUG00000048281)	sec23b (ENSSTUG00000048290)	ccdc85al (ENSSTUG00000048372)	ENSSTUG00000048376	BCL11A (ENSSTUG00000048380)	ENSSTUG00000048392	ENSSTUG00000048398	ENSSTUG00000048410	ENSSTUG00000048425	mettl26 (ENSSTUG00000048472)	wfikkn1 (ENSSTUG00000048480)	RAB40C (ENSSTUG00000048487)	zp3c (ENSSTUG00000048496)	ITPRIP (ENSSTUG00000048503) #10	CALHM1 (ENSSTUG00000048506) #21	zgc:175214 (ENSSTUG00000048511)	pdcd11 (ENSSTUG00000048536) #23	atp5md (ENSSTUG00000048617)	taf5 (ENSSTUG00000048640) #25	atp5md (ENSSTUG00000048822)	taf5 (ENSSTUG00000048826) #25	inab (ENSSTUG00000048835) #27	ENSSTUG00000048836	nt5c2b (ENSSTUG00000048853)	CNNM2 (ENSSTUG00000048902) #30	as3mt (ENSSTUG00000048917) #31	wbp1lb (ENSSTUG00000049033) #34	poll (ENSSTUG00000049036)	dpcd (ENSSTUG00000049043)	fgf8b (ENSSTUG00000049053)
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000001181	ENSSSAG00000113129	ENSSSAG00000001222	ENSSSAG00000084485	ENSSSAG00000009405	ENSSSAG00000001138	ENSSSAG00000119971	ENSSSAG00000000829	ENSSSAG00000001129	ENSSSAG00000000905	ENSSSAG00000108699	ENSSSAG00000079324	ENSSSAG00000079320	zp3c (ENSSSAG00000079310)	ENSSSAG00000079308 #10	ENSSSAG00000112980 #21	zgc:175214 (ENSSSAG00000110688)	pdcd11 (ENSSSAG00000079293) #23	inab (ENSSSAG00000079284) #27	nt5c2b (ENSSSAG00000078886)	ENSSSAG00000000557 #30	as3mt (ENSSSAG00000000508) #31	wbp1lb (ENSSSAG00000111043) #34	poll (ENSSSAG00000008385)	dpcd (ENSSSAG00000000437)	fgf8b (ENSSSAG00000097919)	ENSSSAG00000000388	lbx1b (ENSSSAG00000106457)	cenpk (ENSSSAG00000000322)	ENSSSAG00000078828	ENSSSAG00000077953
Northern pike	MODERN SPECIES	8	gsg1l (ENSELUG00000003460)	TMC5 (ENSELUG00000003489)	TMC7 (ENSELUG00000001120)	NOMO1 (ENSELUG00000003562)	xylt1 (ENSELUG00000003635)	rps15a (ENSELUG00000003667)	notum2 (ENSELUG00000003699)	coq7 (ENSELUG00000003765)	ENSELUG00000003827	fopnl (ENSELUG00000003859)	myh11a (ENSELUG00000003922)	NDE1 (ENSELUG00000003962)	MARF1 (ENSELUG00000004071)	bmerb1 (ENSELUG00000004115)	MPV17L (ENSELUG00000004143)	CALHM1 (ENSELUG00000004161) #21	zgc:175214 (ENSELUG00000026896)	pdcd11 (ENSELUG00000004211) #23	atp5md (ENSELUG00000004222)	taf5 (ENSELUG00000004248) #25	inab (ENSELUG00000004266) #27	nt5c2b (ENSELUG00000004308)	CNNM2 (ENSELUG00000004339) #30	as3mt (ENSELUG00000004368) #31	wbp1lb (ENSELUG00000004387) #34	poll (ENSELUG00000004410)	dpcd (ENSELUG00000004483)	fgf8b (ENSELUG00000004508)	slc2a15b (ENSELUG00000004537)	ENSELUG00000029821	lbx1b (ENSELUG00000004561)
Otomorpha	ANCESTRAL SPECIES	191							ENSGT00940000162682.A.a.b.b.b	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b
Clupeiformes	ANCESTRAL SPECIES	203		ENSGT00390000013726.d	ENSGT00530000063711.b	ENSGT00940000159130	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184.a #16	ENSGT00980000198902	ENSGT01050000244827.D.b.b.b #10	ENSGT01030000234610.b.a.b.a #21	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b	ENSGT00940000164095.b	ENSGT00390000006243	ENSGT00940000155933.b.b
Atlantic herring	MODERN SPECIES	16	ENSCHAG00000011950	caly (ENSCHAG00000011941)	MFAP4 (ENSCHAG00000011820)	ENSCHAG00000011808	ENSCHAG00000011594 ##7	ENSCHAG00000008187 ##7	ENSCHAG00000008079	cfap58 (ENSCHAG00000007998) #9	neurl1aa (ENSCHAG00000007932) #19	slkb (ENSCHAG00000006522) #16	SH3PXD2A (ENSCHAG00000006340) #18	stn1 (ENSCHAG00000006314) #17	slkb (ENSCHAG00000006278) #16	ENSCHAG00000006235	ITPRIP (ENSCHAG00000006229) #10	CALHM1 (ENSCHAG00000006210) #21	zgc:175214 (ENSCHAG00000006202)	pdcd11 (ENSCHAG00000005871) #23	atp5md (ENSCHAG00000005836)	taf5 (ENSCHAG00000005692) #25	inab (ENSCHAG00000005685) #27	nt5c2b (ENSCHAG00000002738)	CNNM2 (ENSCHAG00000014012) #30	as3mt (ENSCHAG00000013938) #31	wbp1lb (ENSCHAG00000013931) #34	poll (ENSCHAG00000013920)	dpcd (ENSCHAG00000013912)	fgf8b (ENSCHAG00000013783)	slc2a15b (ENSCHAG00000013573)	lbx1b (ENSCHAG00000013543)	ENSCHAG00000013436
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	13	ENSDCDG00000002059	ENSDCDG00000002050	PNPLA6 (ENSDCDG00000000726)	caly (ENSDCDG00000000188)	ENSDCDG00000034795 ##7	ENSDCDG00000034790	ENSDCDG00000034788	ENSDCDG00000034780 ##7	cfap58 (ENSDCDG00000034776) #9	neurl1aa (ENSDCDG00000034775) #19	SH3PXD2A (ENSDCDG00000034769) #18	stn1 (ENSDCDG00000034767) #17	slkb (ENSDCDG00000034389) #16	ENSDCDG00000034313	ITPRIP (ENSDCDG00000034311) #10	CALHM1 (ENSDCDG00000034310) #21	zgc:175214 (ENSDCDG00000034308)	pdcd11 (ENSDCDG00000034303) #23	atp5md (ENSDCDG00000034297)	taf5 (ENSDCDG00000034292) #25	inab (ENSDCDG00000034284) #27	nt5c2b (ENSDCDG00000034168)	CNNM2 (ENSDCDG00000034145) #30	as3mt (ENSDCDG00000034141) #31	wbp1lb (ENSDCDG00000034138) #34	poll (ENSDCDG00000034136)	dpcd (ENSDCDG00000034135)	fgf8b (ENSDCDG00000034133)	slc2a15b (ENSDCDG00000034132)	cenpk (ENSDCDG00000034131)	RIMS1 (ENSDCDG00000033416)
Denticle herring	MODERN SPECIES	11	ENSDCDG00000032738	ATE1 (ENSDCDG00000032749)	fgfr2 (ENSDCDG00000032762)	ENSDCDG00000000173	fgfr2 (ENSDCDG00000000206)	ENSDCDG00000000216	ybx1 (ENSDCDG00000000234)	ENSDCDG00000000260	CALHM3 (ENSDCDG00000000269) #20	ENSDCDG00000000287	ENSDCDG00000000295	ENSDCDG00000000308	drgx (ENSDCDG00000000317)	ERCC6 (ENSDCDG00000000342)	cxcl12a (ENSDCDG00000000379)	CALHM1 (ENSDCDG00000000383) #21	ENSDCDG00000000389	oga (ENSDCDG00000000471)	npm3 (ENSDCDG00000000587)	trim8a (ENSDCDG00000000590) #37	sufu (ENSDCDG00000000603)	ENSDCDG00000000626	lzts2a (ENSDCDG00000000637)	pdzd7a (ENSDCDG00000000681)	ENSDCDG00000000733	sfxn3 (ENSDCDG00000000735) ##35	glo1 (ENSDCDG00000000742)	cox6b1 (ENSDCDG00000000745)	ENSDCDG00000000751	luc7l (ENSDCDG00000000759)	stub1 (ENSDCDG00000000769)
Otophysi	ANCESTRAL SPECIES	25	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166377.e	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351.a #12	ENSGT00940000163896	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a.f #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a.e	ENSGT01020000231101	ENSGT00520000055635.c.a.a.a.f	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	554							ENSGT00940000164073.a.h	ENSGT00390000009613.b.h	ENSGT00940000159025.b	ENSGT00940000166376.l	ENSGT00940000156633.d.a.b	ENSGT00940000165755.b.f.a.b.a	ENSGT00940000165755.b.f.a.a.b	ENSGT00940000165755.b.f.a.a.a	ENSGT01050000244827.D.b.b.b.b #10	ENSGT01030000234610.b.a.b.a.m.a #21	ENSGT00940000166025.a.a.b	ENSGT00390000012228 #23	ENSGT00940000166377.f.a	ENSGT00940000153342.a.d #25	ENSGT00520000055635.c.a.a.a.e	ENSGT01020000231101	ENSGT00940000164716.C.c.a	ENSGT00390000000483.a.b.d	ENSGT00940000180035.b.b
Goldfish	MODERN SPECIES	18	sgms2a (ENSCARG00000004057)	ENSCARG00000004069	npnta (ENSCARG00000004092)	tbck (ENSCARG00000004186)	aimp1a (ENSCARG00000004429)	ENSCARG00000004442	dkk2 (ENSCARG00000004459)	papss1 (ENSCARG00000004595)	papss1 (ENSCARG00000005781)	pkd2 (ENSCARG00000006655)	abcg2d (ENSCARG00000006837)	ppm1kb (ENSCARG00000007419)	ENSCARG00000007429	ENSCARG00000007481	ITPRIP (ENSCARG00000007486) #10	CALHM1 (ENSCARG00000007502) #21	zgc:175214 (ENSCARG00000007508)	pdcd11 (ENSCARG00000007532) #23	atp5md (ENSCARG00000007576)	taf5 (ENSCARG00000007611) #25	gsk3bb (ENSCARG00000008132)	si:dkeyp-80c12.8 (ENSCARG00000008191)	ENSCARG00000008199	caly (ENSCARG00000008210)	ENSCARG00000008223	ENSCARG00000008217	ENSCARG00000008374 ##7	ENSCARG00000011320	aimp1a (ENSCARG00000011334)	tbck (ENSCARG00000011370)	npnta (ENSCARG00000011500)
Cyprininae_a	ANCESTRAL SPECIES	528													ENSGT00940000165755.b.f.a.a.b	ENSGT00940000165755.b.f.a.a.a	ENSGT01050000244827.D.b.b.b.b #10	ENSGT01030000234610.b.a.b.a.m.a #21	ENSGT00940000166025.a.a.b	ENSGT00390000012228 #23	ENSGT00940000166377.f.a	ENSGT00940000153342.a.d #25	ENSGT00520000055635.c.a.a.a.e	ENSGT01020000231101	ENSGT00940000164716.C.c.a	ENSGT00390000000483.a.b.d	ENSGT00940000180035.b.b
Common carp reference	MODERN SPECIES	27	lef1 (ENSCCRG00000073428)	hadh (ENSCCRG00000082295)	cyp2u1 (ENSCCRG00000008936)	sgms2a (ENSCCRG00000008950)	gstcd (ENSCCRG00000038725)	npnta (ENSCCRG00000082342)	tbck (ENSCCRG00000033744)	aimp1a (ENSCCRG00000043575)	dkk2 (ENSCCRG00000043571)	papss1 (ENSCCRG00000025335)	pkd2 (ENSCCRG00000047369)	abcg2d (ENSCCRG00000021720)	ENSCCRG00000037777	ENSCCRG00000070355	ENSCCRG00000060180 #10	CALHM1 (ENSCCRG00000021704) #21	zgc:175214 (ENSCCRG00000078817)	pdcd11 (ENSCCRG00000037943) #23	atp5md (ENSCCRG00000037950)	taf5 (ENSCCRG00000021916) #25	gsk3bb (ENSCCRG00000076785)	si:dkeyp-80c12.8 (ENSCCRG00000038011)	ENSCCRG00000038009	caly (ENSCCRG00000037916)	ENSCCRG00000057068	ENSCCRG00000055106	ENSCCRG00000015660 ##7	ENSCCRG00000015602 ##7	cfap58 (ENSCCRG00000058974) #9	neurl1aa (ENSCCRG00000066918) #19	ENSCCRG00000071622 #18
Golden-line barbel	MODERN SPECIES	2071															ITPRIP (ENSSGRG00000011387) #10	CALHM1 (ENSSGRG00000011388) #21	zgc:175214 (ENSSGRG00000011389)	pdcd11 (ENSSGRG00000011396) #23	atp5md (ENSSGRG00000011397)	taf5 (ENSSGRG00000011399) #25	ENSSGRG00000011448
Cyprininae	ANCESTRAL SPECIES	38	ENSGT00940000157714.l	ENSGT00940000157370.b.h	ENSGT00390000004446.i	ENSGT00930000150973.B.e.b.a	ENSGT00940000158244.f	ENSGT00940000154950.y.a.a	ENSGT00940000164073.a.g	ENSGT00390000009613.b.g	ENSGT00940000159025.a	ENSGT00940000166376.k	ENSGT00940000156633.d.a.a	ENSGT00940000175002	ENSGT00940000165755.b.f.a.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.a #10	ENSGT01030000234610.b.a.b.a.m.b #21	ENSGT00940000166025.a.b	ENSGT00940000166377.f.b	ENSGT00940000153342.a.c #25	ENSGT00520000055635.c.a.a.a.f	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b.c	ENSGT00940000180035.a	ENSGT01030000234563.b.a.b.a.a.c.a.b ##7	ENSGT01030000234563.b.a.b.a.b.a.a ##7	ENSGT00530000063534.b.a.b #9	ENSGT00940000156696.B.f #19	ENSGT00940000157732.f.a.a #18	ENSGT00390000000909.i #17	ENSGT00940000156556.h.a	ENSGT00940000157784.c.d.a
Goldfish	MODERN SPECIES		lef1 (ENSCARG00000000579)	sgms2a (ENSCARG00000000571)	gstcd (ENSCARG00000000525)	npnta (ENSCARG00000000477)	tbck (ENSCARG00000000449)	aimp1a (ENSCARG00000000438)	ENSCARG00000000433	dkk2 (ENSCARG00000000424)	papss1 (ENSCARG00000000350)	pkd2 (ENSCARG00000000156)	ppm1kb (ENSCARG00000009159)	ENSCARG00000009154	ENSCARG00000009141	zp3c (ENSCARG00000009127)	ITPRIP (ENSCARG00000009118) #10	CALHM1 (ENSCARG00000009112) #21	zgc:175214 (ENSCARG00000009109)	atp5md (ENSCARG00000009104)	taf5 (ENSCARG00000009085) #25	ENSCARG00000008851	msx1b (ENSCARG00000008825)	caly (ENSCARG00000008820)	ENSCARG00000008811	ENSCARG00000008809	ENSCARG00000008564 ##7	ENSCARG00000003323 ##7	ENSCARG00000003123	ENSCARG00000003119	TRIP10 (ENSCARG00000003107)	VAV1 (ENSCARG00000002985)	pin1 (ENSCARG00000002949)
Cyprininae_a	ANCESTRAL SPECIES	66	ENSGT00940000157714.l	ENSGT00940000157370.b.h	ENSGT00390000004446.i.b	ENSGT00930000150973.B.e.b.a	ENSGT00940000158244.f	ENSGT00940000154950.y.a.a	ENSGT00940000164073.a.g	ENSGT00390000009613.b.g	ENSGT00940000159025.a	ENSGT00940000166376.k	ENSGT00940000156633.d.a.a	ENSGT00940000165755.b.f.a.b.b	ENSGT01030000234567.A.a.a.a.a.b.f	ENSGT01050000244827.D.b.b.b.a #10	ENSGT00940000166025.a.a.a	ENSGT01030000234610.b.a.b.a.m.b #21	ENSGT00940000166025.a.b	ENSGT00940000166377.f.b	ENSGT00940000153342.a.c #25	ENSGT00520000055635.c.a.a.a.f	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b.c	ENSGT00940000180035.a	ENSGT01030000234563.b.a.b.a.a.c.a.b ##7	ENSGT01030000234563.b.a.b.a.b.a.a ##7	ENSGT00530000063534.b.a.b #9	ENSGT00940000156696.B.f #19	ENSGT00940000157732.f.a.a #18	ENSGT00390000000909.i #17	ENSGT00940000156556.h.a	ENSGT00940000157784.c.d.a
Golden-line barbel	MODERN SPECIES	50	cyp2u1 (ENSSGRG00000013868)	sgms2a (ENSSGRG00000013867)	gstcd (ENSSGRG00000013856)	npnta (ENSSGRG00000013845)	tbck (ENSSGRG00000013788)	aimp1a (ENSSGRG00000013786)	ENSSGRG00000013785	dkk2 (ENSSGRG00000013784)	papss1 (ENSSGRG00000012522)	pkd2 (ENSSGRG00000012197)	abcg2d (ENSSGRG00000011534)	ppm1kb (ENSSGRG00000011519)	ENSSGRG00000011518	ITPRIP (ENSSGRG00000011516) #10	zp3c (ENSSGRG00000011514)	CALHM1 (ENSSGRG00000011512) #21	zgc:175214 (ENSSGRG00000011510)	atp5md (ENSSGRG00000011507)	taf5 (ENSSGRG00000011503) #25	ENSSGRG00000011500	msx1b (ENSSGRG00000011499)	caly (ENSSGRG00000011498)	ENSSGRG00000011496	ENSSGRG00000011494	ENSSGRG00000011493	ENSSGRG00000011395 ##7	ENSSGRG00000011370	ENSSGRG00000011066 ##7
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	255	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000155351.a #12	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.e.a #22	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B.o.a	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b	ENSGT00390000001491.b	ENSGT00390000007221.a.b	ENSGT00390000000046.h	ENSGT00940000163077.h
Cyprininae_a	ANCESTRAL SPECIES	574								ENSGT00940000158184.o	ENSGT01030000234543.D.m.a	ENSGT00940000164426.d.a	ENSGT00950000182937.A.a.o.c	ENSGT00940000155351.a #12	ENSGT00940000163896.j.a	ENSGT01050000244827.D.b.b.a.d #10	ENSGT01030000234610.b.a.b.b.f #20	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.f.b #22	ENSGT01030000234610.b.a.a.e.a #22
Common carp reference	MODERN SPECIES	18	ENSCCRG00000013218	ENSCCRG00000072378	ENSCCRG00000010032 #16	ENSCCRG00000010300	ENSCCRG00000010306	KAT6B (ENSCCRG00000073616)	adka (ENSCCRG00000042385)	ap3m1 (ENSCCRG00000020600)	vcla (ENSCCRG00000005235)	plaua (ENSCCRG00000016933)	chuk (ENSCCRG00000008205)	ENSCCRG00000009627	ENSCCRG00000072289	itprip (ENSCCRG00000058077) #10	CALHM3 (ENSCCRG00000009658) #20	ENSCCRG00000011579 #21	CALHM2 (ENSCCRG00000011582) #22	calhm2.1 (ENSCCRG00000009665) #22	ENSCCRG00000056336	atoh7 (ENSCCRG00000065383)	ENSCCRG00000009672	ENSCCRG00000009677	tial1 (ENSCCRG00000000329)	bag3 (ENSCCRG00000001081)	inpp5f (ENSCCRG00000059458)	mcmbp (ENSCCRG00000070447)	sec23ip (ENSCCRG00000047654)	csgalnact2 (ENSCCRG00000047900)	ret (ENSCCRG00000047916)	pcbd1 (ENSCCRG00000054537)	sgpl1 (ENSCCRG00000048047)
Golden-line barbel	MODERN SPECIES	679							ap3m1 (ENSSGRG00000024984)	vcla (ENSSGRG00000025185)	plaua (ENSSGRG00000026457)	chuk (ENSSGRG00000026460)	gsto1 (ENSSGRG00000027626) #12	ENSSGRG00000027627	itprip (ENSSGRG00000027628) #10	CALHM3 (ENSSGRG00000027629) #20	CALHM2 (ENSSGRG00000027630) #22	CALHM1 (ENSSGRG00000027631) #21	calhm2.1 (ENSSGRG00000027632) #22	ENSSGRG00000027633	ENSSGRG00000027635	ENSSGRG00000027636	PKD2L1 (ENSSGRG00000027637)	TIAL1 (ENSSGRG00000027638)	bag3 (ENSSGRG00000027959)	inpp5f (ENSSGRG00000027963)	mcmbp (ENSSGRG00000027994)	sec23ip (ENSSGRG00000028472)	csgalnact2 (ENSSGRG00000028876)	ret (ENSSGRG00000028886)	ENSSGRG00000029140	pcbd1 (ENSSGRG00000029143)	sgpl1 (ENSSGRG00000029205)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	4	galnt2 (ENSCARG00000010699)	pgbd5 (ENSCARG00000010662)	cog2 (ENSCARG00000010383)	agt (ENSCARG00000010368)	ENSCARG00000010345	sf3b5 (ENSCARG00000010337)	oprm1 (ENSCARG00000010320)	ccdc85a (ENSCARG00000010312)	soul2 (ENSCARG00000010302)	SLC24A3 (ENSCARG00000010214)	RIN2 (ENSCARG00000010192)	slc17a5 (ENSCARG00000009751)	eef1a1a (ENSCARG00000009726)	CGAS (ENSCARG00000009722) ##10	KCNQ5 (ENSCARG00000009712)	CALHM1 (ENSCARG00000009708) #21	calhm2.1 (ENSCARG00000009704) #22	ENSCARG00000009697	tial1 (ENSCARG00000009663)	ENSCARG00000009660	ENSCARG00000009656	ENSCARG00000009651	csgalnact2 (ENSCARG00000009645)	ret (ENSCARG00000009557)	ENSCARG00000009538	pcbd1 (ENSCARG00000009520)	sgpl1 (ENSCARG00000007537)	neurog3 (ENSCARG00000007434)	pdlim1 (ENSCARG00000007425)	rel (ENSCARG00000007396)	papolg (ENSCARG00000005227)
Goldfish	MODERN SPECIES	4	adam8a (ENSCARG00000015848)	spef1 (ENSCARG00000015833)	erlin1 (ENSCARG00000015718)	ENSCARG00000015678	slka (ENSCARG00000014935) #16	zgc:153981 (ENSCARG00000014889)	dusp13a (ENSCARG00000014880)	ENSCARG00000014874	KAT6B (ENSCARG00000014842)	plaua (ENSCARG00000014833)	chuk (ENSCARG00000012537)	ENSCARG00000012472	ENSCARG00000012462	itprip (ENSCARG00000012458) #10	CALHM3 (ENSCARG00000012451) #20	CALHM1 (ENSCARG00000012444) #21	ENSCARG00000012424	bag3 (ENSCARG00000012416)	tial1 (ENSCARG00000012293)	inpp5f (ENSCARG00000012088)	mcmbp (ENSCARG00000011957)	sec23ip (ENSCARG00000011942)	csgalnact2 (ENSCARG00000011932)	rab4a (ENSCARG00000011907)	ccsapb (ENSCARG00000011901)	acta1b (ENSCARG00000011887)	ABCB10 (ENSCARG00000011367)	galnt2 (ENSCARG00000010699)	pgbd5 (ENSCARG00000010662)	cog2 (ENSCARG00000010383)	agt (ENSCARG00000010368)
Cyprininae	ANCESTRAL SPECIES	255					ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000155351.a #12	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.e.a #22	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B.o.a	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p
Goldfish	MODERN SPECIES	31	si:ch211-223p8.8 (ENSCARG00000025305)	zgc:153981 (ENSCARG00000025278)	dusp13a (ENSCARG00000025220)	KAT6B (ENSCARG00000025130)	ENSCARG00000025085	ENSCARG00000025064	adka (ENSCARG00000024900)	ap3m1 (ENSCARG00000024857)	vcla (ENSCARG00000022981)	plaua (ENSCARG00000024413)	chuk (ENSCARG00000022486)	gsto1 (ENSCARG00000022430) #12	gsto2 (ENSCARG00000022424) #12	itprip (ENSCARG00000022419) #10	CALHM3 (ENSCARG00000022411) #20	CALHM1 (ENSCARG00000022404) #21	CALHM2 (ENSCARG00000022392) #22	calhm2.1 (ENSCARG00000022389) #22	ENSCARG00000022371	ENSCARG00000022359	atoh7 (ENSCARG00000022355)	PKD2L1 (ENSCARG00000022338)	tial1 (ENSCARG00000022215)	bag3 (ENSCARG00000022204)	inpp5f (ENSCARG00000020211)	mcmbp (ENSCARG00000019437)	sec23ip (ENSCARG00000018268)	csgalnact2 (ENSCARG00000018221)	ret (ENSCARG00000016835)	ENSCARG00000016780	pcbd1 (ENSCARG00000016766)
Cyprininae_a	ANCESTRAL SPECIES	101	ENSGT00940000156184.b.b #16	ENSGT00940000156184.b.a #16	ENSGT00940000162682.A.a.b.b.b.a	ENSGT00940000162682.A.a.b.a.a	ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00390000014320.c.b.f	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000163896.j.b	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f.a #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274.c	ENSGT00940000154962.B.o.a	ENSGT00940000160482	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p	ENSGT00940000158499.b
Golden-line barbel	MODERN SPECIES	312	sfr1 (ENSSGRG00000000469) #14	ENSSGRG00000000472	slka (ENSSGRG00000000567) #16	si:ch211-223p8.8 (ENSSGRG00000005775)	zgc:153981 (ENSSGRG00000005772)	dusp13a (ENSSGRG00000005778)	ENSSGRG00000005780	KAT6B (ENSSGRG00000005783)	adka (ENSSGRG00000005813)	ap3m1 (ENSSGRG00000007447)	vcla (ENSSGRG00000007879)	plaua (ENSSGRG00000008491)	chuk (ENSSGRG00000008557)	ENSSGRG00000010509	itprip (ENSSGRG00000010513) #10	CALHM1 (ENSSGRG00000010516) #21	CALHM2 (ENSSGRG00000010520) #22	calhm2.1 (ENSSGRG00000010524) #22	ENSSGRG00000010526	ENSSGRG00000010527	atoh7 (ENSSGRG00000010529)	PKD2L1 (ENSSGRG00000010531)	TIAL1 (ENSSGRG00000010579)	bag3 (ENSSGRG00000012148)	inpp5f (ENSSGRG00000012151)	mcmbp (ENSSGRG00000012248)	ENSSGRG00000012403	ENSSGRG00000012404	csgalnact2 (ENSSGRG00000012405)	ret (ENSSGRG00000012407)	ENSSGRG00000012408
Common carp reference	MODERN SPECIES	48	slka (ENSCCRG00000062992) #16	dusp13a (ENSCCRG00000063186)	ENSCCRG00000001665	KAT6B (ENSCCRG00000076159)	adka (ENSCCRG00000035773)	ap3m1 (ENSCCRG00000064818)	vcla (ENSCCRG00000007539)	ENSCCRG00000067872	ENSCCRG00000070787	plaua (ENSCCRG00000005596)	chuk (ENSCCRG00000005719)	ENSCCRG00000009407	ENSCCRG00000009650	itprip (ENSCCRG00000055969) #10	CALHM3 (ENSCCRG00000011575) #20	ENSCCRG00000048006 #21	CALHM2 (ENSCCRG00000079939) #22	calhm2.1 (ENSCCRG00000079601) #22	ENSCCRG00000079239	ENSCCRG00000000125	atoh7 (ENSCCRG00000074674)	ENSCCRG00000000176	tial1 (ENSCCRG00000038311)	inpp5f (ENSCCRG00000001168)	mcmbp (ENSCCRG00000007459)	sec23ip (ENSCCRG00000009707)	csgalnact2 (ENSCCRG00000011272)	ret (ENSCCRG00000011287)	si:dkey-192p21.6 (ENSCCRG00000060984)	pcbd1 (ENSCCRG00000061538)	sgpl1 (ENSCCRG00000015634)
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES		npnta (ENSDARG00000018721)	gstcd (ENSDARG00000036494)	sgms2a (ENSDARG00000052520)	cyp2u1 (ENSDARG00000026548)	hadh (ENSDARG00000030765)	lef1 (ENSDARG00000031894)	ENSDARG00000079501	tsga10 (ENSDARG00000052512)	slkb (ENSDARG00000012574) #16	col17a1a (ENSDARG00000069415)	herc56.2 (ENSDARG00000075389)	herc56.3 (ENSDARG00000074136)	herc56.4 (ENSDARG00000074052)	zp3c (ENSDARG00000092919)	ITPRIP (ENSDARG00000036479) #10	CALHM1 (ENSDARG00000005314) #21	zgc:175214 (ENSDARG00000022891)	pdcd11 (ENSDARG00000052480) #23	atp5md (ENSDARG00000096003)	taf5 (ENSDARG00000018325) #25	gsk3bb (ENSDARG00000052468)	si:dkeyp-80c12.8 (ENSDARG00000094465)	msx1b (ENSDARG00000008886)	caly (ENSDARG00000036008)	ENSDARG00000096031	cxcl18b (ENSDARG00000075045)	ENSDARG00000096191	ENSDARG00000112034 ##7	ENSDARG00000103535 ##7	cfap58 (ENSDARG00000069435) #9	neurl1aa (ENSDARG00000069438) #19
Zebrafish	MODERN SPECIES	4	si:ch211-223p8.8 (ENSDARG00000092650)	ENSDARG00000111496	zgc:153981 (ENSDARG00000069529)	dusp13a (ENSDARG00000061498)	ENSDARG00000094665	KAT6B (ENSDARG00000055429)	adka (ENSDARG00000039429)	ap3m1 (ENSDARG00000029928)	vcla (ENSDARG00000044968)	chuk (ENSDARG00000011662)	plaua (ENSDARG00000075265)	gsto1 (ENSDARG00000022183) #12	gsto2 (ENSDARG00000033285) #12	itprip (ENSDARG00000015576) #10	CALHM3 (ENSDARG00000079602) #20	CALHM1 (ENSDARG00000077021) #21	CALHM2 (ENSDARG00000074179) #22	calhm2.1 (ENSDARG00000039482) #22	ENSDARG00000039483	atoh7 (ENSDARG00000069552)	PKD2L1 (ENSDARG00000022503)	tial1 (ENSDARG00000009525)	bag3 (ENSDARG00000039486)	inpp5f (ENSDARG00000061437)	mcmbp (ENSDARG00000055314)	sec23ip (ENSDARG00000061413)	csgalnact2 (ENSDARG00000061400)	ret (ENSDARG00000055305)	si:dkey-192p21.6 (ENSDARG00000091212)	pcbd1 (ENSDARG00000031981)	sgpl1 (ENSDARG00000061375)
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00390000018550 #14	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18
Characiphysae_b	ANCESTRAL SPECIES	29	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Electric eel	DUPLICATION
Electric eel	MODERN SPECIES	90	ADAMTS5 (ENSEEEG00000018766)	ADAMTS1 (ENSEEEG00000018771)	cyyr1 (ENSEEEG00000018820)	APP (ENSEEEG00000018915)	atp5pf (ENSEEEG00000020376)	jam2a (ENSEEEG00000020378)	mrpl39 (ENSEEEG00000020379)	ENSEEEG00000020383	ENSEEEG00000020387	ENSEEEG00000020389	tsga10 (ENSEEEG00000020391)	slkb (ENSEEEG00000020410) #16	ENSEEEG00000020491	zp3c (ENSEEEG00000020493)	ITPRIP (ENSEEEG00000020494) #10	CALHM1 (ENSEEEG00000020495) #21	zgc:175214 (ENSEEEG00000020496)	pdcd11 (ENSEEEG00000020497) #23	atp5md (ENSEEEG00000020503)	taf5 (ENSEEEG00000020507) #25	ENSEEEG00000020509
Electric eel	MODERN SPECIES	287	sfr1 (ENSEEEG00000002293) #14	slka (ENSEEEG00000000739) #16	si:ch211-223p8.8 (ENSEEEG00000000083)	zgc:153981 (ENSEEEG00000000077)	dusp13a (ENSEEEG00000000071)	ENSEEEG00000000064	KAT6B (ENSEEEG00000000059)	adka (ENSEEEG00000023791)	ap3m1 (ENSEEEG00000023774)	vcla (ENSEEEG00000023750)	plaua (ENSEEEG00000023745)	chuk (ENSEEEG00000023706)	gsto2 (ENSEEEG00000023696) #12	itprip (ENSEEEG00000023695) #10	CALHM3 (ENSEEEG00000023694) #20	CALHM1 (ENSEEEG00000023692) #21
Characoidei	ANCESTRAL SPECIES	19	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00390000017909.a	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Mexicana tetra	DUPLICATION
Mexicana tetra	MODERN SPECIES	3	ENSAMXG00000037151	ENSAMXG00000005283	ENSAMXG00000026007	ENSAMXG00000026008	ENSAMXG00000033746	ENSAMXG00000033179	ENSAMXG00000029398	ENSAMXG00000005320	ENSAMXG00000005333	ENSAMXG00000043665	tsga10 (ENSAMXG00000005345)	slkb (ENSAMXG00000005356) #16	ENSAMXG00000031571	zp3c (ENSAMXG00000035354)	ENSAMXG00000037626 #10	CALHM1 (ENSAMXG00000005451) #21	zgc:175214 (ENSAMXG00000034057)	pdcd11 (ENSAMXG00000005458) #23	atp5md (ENSAMXG00000005484)	taf5 (ENSAMXG00000036058) #25	gsk3bb (ENSAMXG00000005487)	ENSAMXG00000037243	caly (ENSAMXG00000031735)	ENSAMXG00000026009	ENSAMXG00000037997	ENSAMXG00000042003	ENSAMXG00000012744 ##7	ENSAMXG00000012668 ##7	ENSAMXG00000037277	ENSAMXG00000033706	ENSAMXG00000040526
Mexicana tetra	MODERN SPECIES	17	sfr1 (ENSAMXG00000034781) #14	ENSAMXG00000003674	slka (ENSAMXG00000004807) #16	si:ch211-223p8.8 (ENSAMXG00000037235)	dusp13a (ENSAMXG00000031015)	ENSAMXG00000031917	KAT6B (ENSAMXG00000004803)	adka (ENSAMXG00000043014)	ap3m1 (ENSAMXG00000004796)	vcla (ENSAMXG00000004789)	plaua (ENSAMXG00000004782)	chuk (ENSAMXG00000004769)	ENSAMXG00000036436	itprip (ENSAMXG00000025968) #10	CALHM3 (ENSAMXG00000029276) #20	CALHM1 (ENSAMXG00000004757) #21	calhm2.1 (ENSAMXG00000004756) #22	ENSAMXG00000038164	atoh7 (ENSAMXG00000025967)	PKD2L1 (ENSAMXG00000004742)	tial1 (ENSAMXG00000038511)	bag3 (ENSAMXG00000004732)	inpp5f (ENSAMXG00000004725)	mcmbp (ENSAMXG00000004722)	sec23ip (ENSAMXG00000004712)	csgalnact2 (ENSAMXG00000004707)	ret (ENSAMXG00000004705)	si:dkey-192p21.6 (ENSAMXG00000004698)	pcbd1 (ENSAMXG00000030052)	sgpl1 (ENSAMXG00000004674)	neurog3 (ENSAMXG00000040416)
Red-bellied piranha	DUPLICATION
Red-bellied piranha	MODERN SPECIES	163	ENSPNAG00000017677	ENSPNAG00000017668	ENSPNAG00000017622	ENSPNAG00000017597	ENSPNAG00000017592	ENSPNAG00000017570	ENSPNAG00000017562	ENSPNAG00000017483	ENSPNAG00000017459	tsga10 (ENSPNAG00000017442)	ENSPNAG00000017393	slkb (ENSPNAG00000017378) #16	ENSPNAG00000017318	zp3c (ENSPNAG00000017302)	ENSPNAG00000017277 #10	CALHM1 (ENSPNAG00000017272) #21	zgc:175214 (ENSPNAG00000017259)	pdcd11 (ENSPNAG00000017225) #23	atp5md (ENSPNAG00000017204)	taf5 (ENSPNAG00000017187) #25	gsk3bb (ENSPNAG00000003466)	msx1b (ENSPNAG00000017073)	caly (ENSPNAG00000017067)	ENSPNAG00000017052	ENSPNAG00000017041	ENSPNAG00000003458 ##7
Red-bellied piranha	MODERN SPECIES	45	ENSPNAG00000014217	slka (ENSPNAG00000003068) #16	si:ch211-223p8.8 (ENSPNAG00000003074)	zgc:153981 (ENSPNAG00000003075)	dusp13a (ENSPNAG00000014306)	ENSPNAG00000014321	KAT6B (ENSPNAG00000003109)	adka (ENSPNAG00000014449)	ap3m1 (ENSPNAG00000014489)	vcla (ENSPNAG00000014585)	plaua (ENSPNAG00000014603)	chuk (ENSPNAG00000014647)	gsto2 (ENSPNAG00000014672) #12	itprip (ENSPNAG00000014679) #10	CALHM3 (ENSPNAG00000003213) #20	CALHM1 (ENSPNAG00000014696) #21	calhm2.1 (ENSPNAG00000014705) #22	ENSPNAG00000014735	ENSPNAG00000014738	atoh7 (ENSPNAG00000014747)	PKD2L1 (ENSPNAG00000014784)	tial1 (ENSPNAG00000003272)	bag3 (ENSPNAG00000003286)	inpp5f (ENSPNAG00000003318)	mcmbp (ENSPNAG00000014983)	sec23ip (ENSPNAG00000014993)	csgalnact2 (ENSPNAG00000015022)	ret (ENSPNAG00000015122)	si:dkey-192p21.6 (ENSPNAG00000015170)	ENSPNAG00000015206	pcbd1 (ENSPNAG00000015221)
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	18	ENSIPUG00000014396	vangl1 (ENSIPUG00000014436)	Nhlh1 (ENSIPUG00000014462)	ENSIPUG00000014473	hpxb (ENSIPUG00000014483)	ENSIPUG00000014559	ENSIPUG00000014830	ENSIPUG00000014851	ENSIPUG00000014868	tsga10 (ENSIPUG00000014880)	slk (ENSIPUG00000014943) #16	zp3c (ENSIPUG00000014959)	zp3c (ENSIPUG00000014983)	zp3c (ENSIPUG00000015025)	ENSIPUG00000015043 #10	CALHM1 (ENSIPUG00000015057) #21	zgc:175214 (ENSIPUG00000015061)	pdcd11 (ENSIPUG00000015102) #23	atp5md (ENSIPUG00000015187)	taf5 (ENSIPUG00000015214) #25	gsk3bb (ENSIPUG00000015272)	msxb (ENSIPUG00000015344)	caly (ENSIPUG00000015354)	cxcl18b (ENSIPUG00000015368)	ENSIPUG00000015415 ##7	ENSIPUG00000015492 ##7	cfap58 (ENSIPUG00000015570) #9	neurl1 (ENSIPUG00000019896) #19	sh3pxd2a (ENSIPUG00000019909) #18	obfc1 (ENSIPUG00000019983) #17	lrrc58a (ENSIPUG00000020001)
Channel catfish	DUPLICATION
Channel catfish	MODERN SPECIES	22	ENSIPUG00000020873	slka (ENSIPUG00000020996) #16	si:ch211-223p8.8 (ENSIPUG00000021038)	zgc:153981 (ENSIPUG00000021042)	DUSP13 (ENSIPUG00000021047)	CALHM1 (ENSIPUG00000021054) #21	kat6b (ENSIPUG00000021062)	adk (ENSIPUG00000021067)	AP3M1 (ENSIPUG00000021086)	vcl (ENSIPUG00000021114)	plau (ENSIPUG00000021154)	chuk (ENSIPUG00000021170)	gsto1 (ENSIPUG00000021201) #12	itprip (ENSIPUG00000021212) #10	CALHM3 (ENSIPUG00000021217) #20	CALHM1 (ENSIPUG00000021223) #21	calhm2.1 (ENSIPUG00000021233) #22	ENSIPUG00000021238	atoh7 (ENSIPUG00000021250)	PKD2L1 (ENSIPUG00000021253)	tial1 (ENSIPUG00000021261)	bag3 (ENSIPUG00000021263)	inpp5f (ENSIPUG00000021274)	mcmbp (ENSIPUG00000021364)	Sec23ip (ENSIPUG00000021437)	CSGALNACT2 (ENSIPUG00000021464)	ret (ENSIPUG00000021488)	si:dkey-192p21.6 (ENSIPUG00000021544)	pcbd1 (ENSIPUG00000021570)	sgpl1 (ENSIPUG00000021596)	ENSIPUG00000021615
Channel catfish	MODERN SPECIES	22	SERTAD2 (ENSIPUG00000020596)	grpa (ENSIPUG00000020599)	echs1 (ENSIPUG00000020612)	fuom (ENSIPUG00000020642)	msx3 (ENSIPUG00000020663)	znf511 (ENSIPUG00000020651)	adam8a (ENSIPUG00000020673)	spef1 (ENSIPUG00000020768)	erlin1 (ENSIPUG00000020783)	cfap43 (ENSIPUG00000020810) #13	ENSIPUG00000020873	slka (ENSIPUG00000020996) #16	si:ch211-223p8.8 (ENSIPUG00000021038)	zgc:153981 (ENSIPUG00000021042)	DUSP13 (ENSIPUG00000021047)	CALHM1 (ENSIPUG00000021054) #21	kat6b (ENSIPUG00000021062)	adk (ENSIPUG00000021067)	AP3M1 (ENSIPUG00000021086)	vcl (ENSIPUG00000021114)	plau (ENSIPUG00000021154)	chuk (ENSIPUG00000021170)	gsto1 (ENSIPUG00000021201) #12	itprip (ENSIPUG00000021212) #10	CALHM3 (ENSIPUG00000021217) #20	CALHM1 (ENSIPUG00000021223) #21	calhm2.1 (ENSIPUG00000021233) #22	ENSIPUG00000021238	atoh7 (ENSIPUG00000021250)	PKD2L1 (ENSIPUG00000021253)	tial1 (ENSIPUG00000021261)
Spotted gar	MODERN SPECIES	671	ENSLOCG00000018252	ENSLOCG00000011997 ##7	ENSLOCG00000011988 ##7	cfap58 (ENSLOCG00000011978) #9	neurl1aa (ENSLOCG00000011969) #19	SH3PXD2A (ENSLOCG00000011958) #18	stn1 (ENSLOCG00000011951) #17	slka (ENSLOCG00000011943) #16	ENSLOCG00000011911	ENSLOCG00000011901	sfr1 (ENSLOCG00000011891) #14	CFAP43 (ENSLOCG00000011880) #13	gsto2 (ENSLOCG00000011872) #12	itprip (ENSLOCG00000011865) #10	CALHM3 (ENSLOCG00000011856) #20	CALHM1 (ENSLOCG00000011849) #21	calhm2.1 (ENSLOCG00000011840) #22	zgc:175214 (ENSLOCG00000011833)	pdcd11 (ENSLOCG00000011818) #23	atp5md (ENSLOCG00000011809)	taf5 (ENSLOCG00000011799) #25	pcgf6 (ENSLOCG00000011792) #26	inab (ENSLOCG00000011782) #27	nt5c2b (ENSLOCG00000011770)	cnnm2a (ENSLOCG00000011756) #30	as3mt (ENSLOCG00000011748) #31	borcs7 (ENSLOCG00000011739) #32	cyp17a1 (ENSLOCG00000011729) #33	wbp1la (ENSLOCG00000011721) #34	poll (ENSLOCG00000011706)	dpcd (ENSLOCG00000011698)
Reedfish	MODERN SPECIES	10	ENSECRG00000006946	ENSECRG00000006958	ENSECRG00000007017 ##7	ENSECRG00000007079	cfap58 (ENSECRG00000007087) #9	neurl1aa (ENSECRG00000007103) #19	SH3PXD2A (ENSECRG00000007116) #18	stn1 (ENSECRG00000007127) #17	slka (ENSECRG00000007144) #16	ENSECRG00000007182	sfr1 (ENSECRG00000007226) #14	ENSECRG00000007238 #13	gsto2 (ENSECRG00000007253) #12	itprip (ENSECRG00000007263) #10	CALHM3 (ENSECRG00000007274) #20	CALHM1 (ENSECRG00000007283) #21	calhm2.1 (ENSECRG00000007287) #22	ENSECRG00000007296	ENSECRG00000007304	ENSECRG00000007314	ENSECRG00000007317	pxmp2 (ENSECRG00000007325)	zgc:175214 (ENSECRG00000007332)	inab (ENSECRG00000007342) #27	nt5c2b (ENSECRG00000007361)	ENSECRG00000007387 #30	cnnm2a (ENSECRG00000007397) #30	as3mt (ENSECRG00000007410) #31	borcs7 (ENSECRG00000007423) #32	cyp17a1 (ENSECRG00000007434) #33	wbp1la (ENSECRG00000007447) #34
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a.b.b #20
Euteleostomi	ANCESTRAL SPECIES	141																ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031
Actinopterygii	ANCESTRAL SPECIES	29	ENSGT00530000064791	ENSGT00940000157716	ENSGT01030000234563.b.a.b.a.a ##7	ENSGT01030000234563.b.a.b.b #7	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184 #16	ENSGT00940000168158	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515	ENSGT00390000014031
Neopterygii	ANCESTRAL SPECIES	33	ENSGT00530000064791	ENSGT00940000157716	ENSGT00760000119781	ENSGT01030000234563.b.a.b.a.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19	ENSGT00940000157732.f.a #18	ENSGT00390000000909 #17	ENSGT00940000156184 #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT00940000158515
Osteoglossocephalai	ANCESTRAL SPECIES	92								ENSGT00940000157732.f.b #18	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34
Clupeocephala	ANCESTRAL SPECIES	209								ENSGT00940000157732.f.b #18	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b
Euteleosteomorpha	ANCESTRAL SPECIES	89	ENSGT00700000104522	ENSGT01030000234606.a.a.a.b	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01000000215701	ENSGT00940000154865	ENSGT00940000167270	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A
Acanthomorphata	ANCESTRAL SPECIES	96	ENSGT01030000234606.a.a.a.b	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT00940000154865	ENSGT00940000167270	ENSGT00530000068411	ENSGT00860000134673	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A
Euacanthomorphacea	ANCESTRAL SPECIES	51	ENSGT01030000234606.a.a.a.b	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT00940000154865	ENSGT00940000167270	ENSGT00530000068411	ENSGT00860000134673	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A
Pinecone sodierfish	MODERN SPECIES	6	ENSMMDG00005024481	vax1 (ENSMMDG00005024482)	atp6v1ba (ENSMMDG00005024487)	shtn1 (ENSMMDG00005024504)	eno4 (ENSMMDG00005024508)	hspa12a (ENSMMDG00005024516)	PNLIPRP2 (ENSMMDG00005024531)	pitx3 (ENSMMDG00005024535)	GBF1 (ENSMMDG00005024541)	macroh2a2 (ENSMMDG00005024548)	ENSMMDG00005024550	ENSMMDG00005024551	ENSMMDG00005024552	ENSMMDG00005024553	hells (ENSMMDG00005024554)	CALHM3 (ENSMMDG00005024557) #20	calhm2.1 (ENSMMDG00005024558) #22	ENSMMDG00005024559	pcgf6 (ENSMMDG00005024561) #26	inaa (ENSMMDG00005024563) #27	ENSMMDG00005024565	ENSMMDG00005024566	ENSMMDG00005024569	pcgf5a (ENSMMDG00005024571)	cep68 (ENSMMDG00005024573)	ENSMMDG00005024574	tlx1 (ENSMMDG00005024575)	ENSMMDG00005024576	slc2a15a (ENSMMDG00005024578)	fgf8a (ENSMMDG00005024579)	fbxw4 (ENSMMDG00005024581)
Percomorphaceae	ANCESTRAL SPECIES	57														ENSGT00860000134673	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b	ENSGT00940000161152	ENSGT01030000234606.a.a.a.b	ENSGT00700000104522
Tiger tail seahorse	MODERN SPECIES	42													ENSHCOG00000001043	ncapd3 (ENSHCOG00000001088)	hells (ENSHCOG00000001119)	CALHM3 (ENSHCOG00000001129) #20	calhm2.1 (ENSHCOG00000001131) #22	rab1ab (ENSHCOG00000001137)	ENSHCOG00000001144	ENSHCOG00000001147	tlx1 (ENSHCOG00000001150)
Percomorphaceae_B	ANCESTRAL SPECIES	24	ENSGT00940000154511.a	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	18	ENSGT00940000154511.a	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a
Eupercaria	ANCESTRAL SPECIES	15	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Tetraodontidae	ANCESTRAL SPECIES	83	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20
Fugu	MODERN SPECIES	16	RNF166 (ENSTRUG00000031483)	ENSTRUG00000026748	cyp17a1 (ENSTRUG00000001509) #33	borcs7 (ENSTRUG00000032893) #32	nt5c2a (ENSTRUG00000001182)	wbp1la (ENSTRUG00000032138) #34	fbxw4 (ENSTRUG00000001025)	fgf8a (ENSTRUG00000000925)	slc2a15a (ENSTRUG00000000474)	ENSTRUG00000000457	tlx1 (ENSTRUG00000000431)	ENSTRUG00000028920	ENSTRUG00000023025	rab1ab (ENSTRUG00000023164)	hells (ENSTRUG00000000350)	CALHM3 (ENSTRUG00000000336) #20	dnajc12 (ENSTRUG00000024432)	SIRT1 (ENSTRUG00000017974)	CACUL1 (ENSTRUG00000020565)	MYPN (ENSTRUG00000017955)	atoh7 (ENSTRUG00000017954)	TIAL1 (ENSTRUG00000020927)	inpp5f (ENSTRUG00000017919)	mcmbp (ENSTRUG00000017916)	sec23ip (ENSTRUG00000017907)	csgalnact2 (ENSTRUG00000017903)	ret (ENSTRUG00000017885)	sgpl1 (ENSTRUG00000017861)	pcbd1 (ENSTRUG00000017869)	neurog3 (ENSTRUG00000020179)	pdlim1 (ENSTRUG00000017854)
Tetraodon	MODERN SPECIES	26	tbc1d25 (ENSTNIG00000003761)	ENSTNIG00000003760	ENSTNIG00000003759	ENSTNIG00000003758	ENSTNIG00000003755	ENSTNIG00000003752	ENSTNIG00000003747	ENSTNIG00000003746	ENSTNIG00000003745	ENSTNIG00000000531	si:cabz01090165.1 (ENSTNIG00000003744)	ENSTNIG00000003743	ENSTNIG00000003740	ENSTNIG00000000118	hells (ENSTNIG00000003738)	CALHM3 (ENSTNIG00000003737) #20	ENSTNIG00000003736	MYH9 (ENSTNIG00000003735)	ENSTNIG00000003734	WAS (ENSTNIG00000003727)	SLC38A5 (ENSTNIG00000003726)	apex2 (ENSTNIG00000003725)	rad23aa (ENSTNIG00000003723)	ENSTNIG00000003720	ENSTNIG00000003718	ENSTNIG00000003717	ENSTNIG00000003716	ENSTNIG00000003698	MSANTD2 (ENSTNIG00000003697)	supt16h (ENSTNIG00000003692)	tox4b (ENSTNIG00000003691)
Eupecaria_A	ANCESTRAL SPECIES	26	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Eupecaria_B	ANCESTRAL SPECIES	26	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Perciformes	ANCESTRAL SPECIES	40	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.n	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b
Perciformes_a	ANCESTRAL SPECIES	35	ENSGT00950000182909.b.b.b	ENSGT00940000154511.a	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.n	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b
Pike perch	MODERN SPECIES	193	cyp17a1 (ENSSLUG00000023412) #33	borcs7 (ENSSLUG00000023402) #32	nt5c2a (ENSSLUG00000023014)	ENSSLUG00000022977	wbp1la (ENSSLUG00000022974) #34	fbxw4 (ENSSLUG00000022969)	fgf8a (ENSSLUG00000022963)	slc2a15a (ENSSLUG00000022955)	ENSSLUG00000022951	ENSSLUG00000022945	tlx1 (ENSSLUG00000022940)	ENSSLUG00000022937	ENSSLUG00000022929	rab1ab (ENSSLUG00000022817)	hells (ENSSLUG00000022754)	CALHM3 (ENSSLUG00000022731) #20	calhm2.1 (ENSSLUG00000022728) #22	ncapd3 (ENSSLUG00000022558)
Cottioidei	ANCESTRAL SPECIES	36						ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.n	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000159378	ENSGT00940000159406	ENSGT00390000000403	ENSGT00940000153441.a.b	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B	ENSGT00940000159204	ENSGT00940000155996	ENSGT00390000017265	ENSGT00940000156602	ENSGT01050000244968.d	ENSGT00940000158499
Lumpfish	MODERN SPECIES	6	RIMS1 (ENSCLMG00005004792)	ENSCLMG00005005051	ENSCLMG00005005055	ENSCLMG00005005062	wbp1la (ENSCLMG00005005063) #34	fbxw4 (ENSCLMG00005005066)	fgf8a (ENSCLMG00005005067)	slc2a15a (ENSCLMG00005005070)	ENSCLMG00005005071	ENSCLMG00005005075	tlx1 (ENSCLMG00005005077)	cep68 (ENSCLMG00005005087)	rab1ab (ENSCLMG00005005090)	ENSCLMG00005005100	hells (ENSCLMG00005005103)	CALHM3 (ENSCLMG00005005124) #20	calhm2.1 (ENSCLMG00005005127) #22	ncapd3 (ENSCLMG00005005143)	dnajc12 (ENSCLMG00005005429)	ENSCLMG00005005435	CACUL1 (ENSCLMG00005005444)	MYPN (ENSCLMG00005005447)	atoh7 (ENSCLMG00005005449)	PKD2L1 (ENSCLMG00005005450)	tial1 (ENSCLMG00005005456)	bag3 (ENSCLMG00005005512)	inpp5f (ENSCLMG00005005516)	mcmbp (ENSCLMG00005005943)	sec23ip (ENSCLMG00005005956)	csgalnact2 (ENSCLMG00005006181)	ret (ENSCLMG00005006182)
Stickleback	MODERN SPECIES	6	ENSGACG00000003723	ablim1a (ENSGACG00000003725)	fhip2a (ENSGACG00000003758)	srfb (ENSGACG00000003778)	wbp1la (ENSGACG00000003782) #34	fbxw4 (ENSGACG00000003785)	fgf8a (ENSGACG00000003803)	slc2a15a (ENSGACG00000003828)	ENSGACG00000003848	ENSGACG00000003856	tlx1 (ENSGACG00000003860)	ENSGACG00000003861	ENSGACG00000003862	rab1ab (ENSGACG00000003864)	hells (ENSGACG00000003897)	CALHM3 (ENSGACG00000003915) #20	calhm2.1 (ENSGACG00000003917) #22	ncapd3 (ENSGACG00000003922)	mxtx1 (ENSGACG00000003944)	ENSGACG00000003951	sertad2b (ENSGACG00000003958)	slc1a4 (ENSGACG00000003961)	smap1 (ENSGACG00000003966)	b3gat2 (ENSGACG00000003974)	OGFRL1 (ENSGACG00000003979)	asrgl1 (ENSGACG00000003982)	RIMS1 (ENSGACG00000004016)	PTK7 (ENSGACG00000004033)	ENSGACG00000004041	si:ch211-114n24.6 (ENSGACG00000004049)	ENSGACG00000004053
Eupecaria_C	ANCESTRAL SPECIES	28	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20
Gilthead seabream	MODERN SPECIES	6	tk2 (ENSSAUG00010010149)	ENSSAUG00010010175	nvl (ENSSAUG00010010191)	ENSSAUG00010011323	degs1 (ENSSAUG00010011326)	fbxo28 (ENSSAUG00010011329)	polr1c (ENSSAUG00010011334)	ENSSAUG00010011347	NDST2 (ENSSAUG00010011374)	zswim8 (ENSSAUG00010014870)	ENSSAUG00010016705	chchd1 (ENSSAUG00010016708)	ENSSAUG00010016709	ENSSAUG00010016710	hells (ENSSAUG00010016711)	CALHM3 (ENSSAUG00010016715) #20	ENSSAUG00010016716	galm (ENSSAUG00010016722)	ENSSAUG00010016731	HNRNPLL (ENSSAUG00010016743)	cdk1 (ENSSAUG00010017703)	ctu2 (ENSSAUG00010017706)	RNF166 (ENSSAUG00010017708)	ENSSAUG00010017709	cyp17a1 (ENSSAUG00010017711) #33	borcs7 (ENSSAUG00010017727) #32	nt5c2a (ENSSAUG00010017736)	ENSSAUG00010017755	fbxw4 (ENSSAUG00010017756)	fgf8a (ENSSAUG00010017764)	slc2a15a (ENSSAUG00010017768)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	32	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20
Large yellow croaker	MODERN SPECIES	2	rasgef1ba (ENSLCRG00005020540)	ENSLCRG00005020548	tmem175 (ENSLCRG00005020549)	ENSLCRG00005020553	WDFY3 (ENSLCRG00005020725)	ENSLCRG00005000079	ENSLCRG00005000086	RUSC2 (ENSLCRG00005000094)	ENSLCRG00005000107	ENSLCRG00005000114	tlx1 (ENSLCRG00005000123)	ENSLCRG00005000125	cep68 (ENSLCRG00005000130)	rab1ab (ENSLCRG00005000142)	hells (ENSLCRG00005000195)	CALHM3 (ENSLCRG00005000302) #20	ENSLCRG00005000309	ENSLCRG00005000317	ENSLCRG00005000321	ENSLCRG00005000326	pcca (ENSLCRG00005000375)	ENSLCRG00005000529	vps8 (ENSLCRG00005000538)	ENSLCRG00005005179	calhm2.1 (ENSLCRG00005005181) #22	ncapd3 (ENSLCRG00005005192)	ENSLCRG00005005472	RIN2 (ENSLCRG00005005475)	ENSLCRG00005005481	ENSLCRG00005005497	ENSLCRG00005005499
European seabass	MODERN SPECIES	1	ENSDLAG00005026678	ENSDLAG00005034809	ENSDLAG00005034886	ENSDLAG00005007814	cyp17a1 (ENSDLAG00005007508) #33	ENSDLAG00005007486 #32	nt5c2a (ENSDLAG00005006205)	fbxw4 (ENSDLAG00005034129)	fgf8a (ENSDLAG00005005948)	slc2a15a (ENSDLAG00005005837)	ENSDLAG00005026816	tlx1 (ENSDLAG00005030787)	ENSDLAG00005033963	ENSDLAG00005005676	ENSDLAG00005004953	ENSDLAG00005004892 #20	ENSDLAG00005004598	ENSDLAG00005026589	ENSDLAG00005024859	ENSDLAG00005024856	chchd1 (ENSDLAG00005024851)	ENSDLAG00005024847	zswim8 (ENSDLAG00005024615)	ENSDLAG00005024315	ENSDLAG00005030395	ENSDLAG00005024277	fbxo28 (ENSDLAG00005028519)	degs1 (ENSDLAG00005024270)	nvl (ENSDLAG00005024183)	ENSDLAG00005027780	ENSDLAG00005033469
Ballan wrasse	MODERN SPECIES	290				FAM98A (ENSLBEG00000025346)	DNAH2 (ENSLBEG00000025185)	ENSLBEG00000025100	rasgrp3 (ENSLBEG00000025000)	LTBP1 (ENSLBEG00000024891)	ttc27 (ENSLBEG00000024787)	ENSLBEG00000024757	BIRC6 (ENSLBEG00000024531)	yipf4 (ENSLBEG00000024453)	exo1 (ENSLBEG00000024405)	ENSLBEG00000024364	ENSLBEG00000024344	CALHM3 (ENSLBEG00000024328) #20	ncapd3 (ENSLBEG00000024293)	calhm2.1 (ENSLBEG00000024277) #22	LRRC73 (ENSLBEG00000024245)	DLK2 (ENSLBEG00000024196)
Percomorphaceae_D	ANCESTRAL SPECIES	19	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Anabantaria	ANCESTRAL SPECIES	17	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c
Anabantoidei	ANCESTRAL SPECIES	17	ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27
Climbing perch	MODERN SPECIES	6	ENSATEG00000006645	cyp17a1 (ENSATEG00000006671) #33	ENSATEG00000027968 #32	nt5c2a (ENSATEG00000007708)	wbp1la (ENSATEG00000028457) #34	ENSATEG00000007857	fbxw4 (ENSATEG00000007875)	fgf8a (ENSATEG00000026743)	slc2a15a (ENSATEG00000007930)	ENSATEG00000007988	tlx1 (ENSATEG00000008007)	ENSATEG00000028010	ENSATEG00000008036	ENSATEG00000008052	ENSATEG00000008107	ENSATEG00000008203 #20	ENSATEG00000008251 #22	ENSATEG00000008267	CCDC85A (ENSATEG00000008323)	ENSATEG00000008364	FANCL (ENSATEG00000008380)	ENSATEG00000025669	ENSATEG00000027192	ENSATEG00000008394	RIMS1 (ENSATEG00000008497)	asrgl1 (ENSATEG00000008570)	OGFRL1 (ENSATEG00000008583)	b3gat2 (ENSATEG00000008614)	smap1 (ENSATEG00000027185)	ENSATEG00000008668	ENSATEG00000008702
Siamese fighting fish	MODERN SPECIES	6	borcs7 (ENSBSLG00000018888) #32	nt5c2a (ENSBSLG00000018270)	ENSBSLG00000018157 #34	fgf8a (ENSBSLG00000017970)	fbxw4 (ENSBSLG00000017928)	slc2a15a (ENSBSLG00000017772)	ENSBSLG00000017749	ENSBSLG00000017735	ENSBSLG00000017719	tlx1 (ENSBSLG00000017662)	ENSBSLG00000017648	ENSBSLG00000017633	ENSBSLG00000017629	rab1ab (ENSBSLG00000017531)	hells (ENSBSLG00000017428)	CALHM3 (ENSBSLG00000017409) #20	calhm2.1 (ENSBSLG00000017403) #22	ncapd3 (ENSBSLG00000017235)	ENSBSLG00000017204	ENSBSLG00000017159	ENSBSLG00000016734	ENSBSLG00000016317	pcca (ENSBSLG00000015707)	FAM98A (ENSBSLG00000015581)	ENSBSLG00000015566	ENSBSLG00000015336	ENSBSLG00000015307	CDT1 (ENSBSLG00000015259)	aprt (ENSBSLG00000015169)	tk2 (ENSBSLG00000015014)	ENSBSLG00000015002
Zig-zag eel	MODERN SPECIES	6	tlx1 (ENSMAMG00000009039)	ENSMAMG00000026497	slc2a15a (ENSMAMG00000009076)	fgf8a (ENSMAMG00000009113)	fbxw4 (ENSMAMG00000009140)	nt5c2a (ENSMAMG00000009164)	ENSMAMG00000009222 #32	cyp17a1 (ENSMAMG00000009230) #33	ENSMAMG00000009255	ENSMAMG00000009262	ENSMAMG00000009280	ENSMAMG00000009304	ENSMAMG00000009341	ENSMAMG00000009356	ENSMAMG00000009850	ENSMAMG00000009903 #20	ENSMAMG00000027999 #22	ENSMAMG00000009946	ENSMAMG00000009982	ENSMAMG00000010014	ENSMAMG00000010029	ENSMAMG00000010035	CCDC85A (ENSMAMG00000010040)	ENSMAMG00000010062	fancl (ENSMAMG00000024657)	ENSMAMG00000010110	ENSMAMG00000010123	ENSMAMG00000010141	RIMS1 (ENSMAMG00000010155)	ENSMAMG00000010214	asrgl1 (ENSMAMG00000010317)
Carangaria	ANCESTRAL SPECIES	19							ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000157361.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b
Carangaria_A	ANCESTRAL SPECIES	31	ENSGT00940000154511.a	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27	ENSGT00940000158034 #26
Seriola	ANCESTRAL SPECIES	14	ENSGT00940000154511.a	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B	ENSGT00940000159583	ENSGT00940000155884.a.c	ENSGT00940000157081	ENSGT00530000063867.b	ENSGT00940000154418.a.a.a #27
Greater amberjack	MODERN SPECIES	30							fbxw4 (ENSSDUG00000016703)	fgf8a (ENSSDUG00000016733)	slc2a15a (ENSSDUG00000016737)	ENSSDUG00000016763	tlx1 (ENSSDUG00000016770)	ENSSDUG00000016787	ENSSDUG00000016800	rab1ab (ENSSDUG00000016888)	hells (ENSSDUG00000016924)	CALHM3 (ENSSDUG00000017015) #20	calhm2.1 (ENSSDUG00000017039) #22	ncapd3 (ENSSDUG00000017066)	zgc:175280 (ENSSDUG00000017134)	ENSSDUG00000017182	vrk2 (ENSSDUG00000017194)	fancl (ENSSDUG00000017224)	ENSSDUG00000017276	ENSSDUG00000017290	RIMS1 (ENSSDUG00000017330)	asrgl1 (ENSSDUG00000017515)	OGFRL1 (ENSSDUG00000017527)	b3gat2 (ENSSDUG00000017562)	smap1 (ENSSDUG00000017573)	slc1a4 (ENSSDUG00000017597)	sertad2b (ENSSDUG00000017629)
Yellowtail amberjack	MODERN SPECIES	3109	RNF166 (ENSSLDG00000018689)	ENSSLDG00000018704	cyp17a1 (ENSSLDG00000018716) #33	borcs7 (ENSSLDG00000018734) #32	nt5c2a (ENSSLDG00000018749)	wbp1la (ENSSLDG00000018784) #34	fbxw4 (ENSSLDG00000018817)	fgf8a (ENSSLDG00000018838)	slc2a15a (ENSSLDG00000018856)	ENSSLDG00000018888	tlx1 (ENSSLDG00000018898)	ENSSLDG00000018910	ENSSLDG00000018925	rab1ab (ENSSLDG00000018942)	hells (ENSSLDG00000018960)	CALHM3 (ENSSLDG00000019000) #20	calhm2.1 (ENSSLDG00000019017) #22	ENSSLDG00000019024	ncapd3 (ENSSLDG00000019038)	zgc:175280 (ENSSLDG00000019070)	ENSSLDG00000019095	ENSSLDG00000019106	fancl (ENSSLDG00000019147)	ENSSLDG00000019191	RIMS1 (ENSSLDG00000019205)	asrgl1 (ENSSLDG00000019318)	OGFRL1 (ENSSLDG00000019346)	mibp2 (ENSSLDG00000019383)	b3gat2 (ENSSLDG00000019390)	smap1 (ENSSLDG00000019406)	slc1a4 (ENSSLDG00000019426)
Barramundi perch	MODERN SPECIES	338	RNF166 (ENSLCAG00010013229)	ENSLCAG00010013228	cyp17a1 (ENSLCAG00010013188) #33	borcs7 (ENSLCAG00010013169) #32	nt5c2a (ENSLCAG00010013040)	wbp1la (ENSLCAG00010012975) #34	fbxw4 (ENSLCAG00010012970)	fgf8a (ENSLCAG00010012964)	slc2a15a (ENSLCAG00010012928)	ENSLCAG00010012914	tlx1 (ENSLCAG00010012909)	ENSLCAG00010012907	cep68 (ENSLCAG00010012901)	rab1ab (ENSLCAG00010012896)	hells (ENSLCAG00010012788)	CALHM3 (ENSLCAG00010012762) #20	calhm2.1 (ENSLCAG00010012756) #22	ncapd3 (ENSLCAG00010012677)
Pleuronectoidei	ANCESTRAL SPECIES	107				ENSGT00950000182909.b.b.b	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b
Tongue sole	MODERN SPECIES	3	cdh1 (ENSCSEG00000016749)	RIN2 (ENSCSEG00000016764)	ENSCSEG00000016789	ENSCSEG00000016841	borcs7 (ENSCSEG00000016849) #32	cyp17a1 (ENSCSEG00000016867) #33	ctu2 (ENSCSEG00000016884)	wbp1la (ENSCSEG00000016898) #34	slc2a15a (ENSCSEG00000016904)	fgf8a (ENSCSEG00000016911)	fbxw4 (ENSCSEG00000016917)	tlx1 (ENSCSEG00000016924)	ENSCSEG00000016934	ENSCSEG00000016941	hells (ENSCSEG00000016985)	CALHM3 (ENSCSEG00000017051) #20	ncapd3 (ENSCSEG00000017061)	MCM8 (ENSCSEG00000017142)	CRLS1 (ENSCSEG00000017167)	ENSCSEG00000017170	ENSCSEG00000017185	ENSCSEG00000017237	si:ch73-130a3.4 (ENSCSEG00000017296)	cdc5l (ENSCSEG00000017309)	supt3h (ENSCSEG00000017349)	ENSCSEG00000017387	gja5b (ENSCSEG00000017394)	ENSCSEG00000017398	rbm45 (ENSCSEG00000017409)	zc3h15 (ENSCSEG00000017422)	dusp19b (ENSCSEG00000017443)
Turbot	MODERN SPECIES	6	RGS7 (ENSSMAG00000016962)	ube2d1a (ENSSMAG00000035890)	BICC1 (ENSSMAG00000017028)	phyhipla (ENSSMAG00000017091)	FAM13C (ENSSMAG00000017101)	ENSSMAG00000032889	slc16a9a (ENSSMAG00000017139)	CCDC6 (ENSSMAG00000017156)	ANK3 (ENSSMAG00000017225)	ubac2 (ENSSMAG00000017246)	dachc (ENSSMAG00000017280)	mzt1 (ENSSMAG00000037601)	bora (ENSSMAG00000017310)	DIS3 (ENSSMAG00000017337)	ENSSMAG00000017423	ENSSMAG00000017514 #20	ENSSMAG00000017528	ENSSMAG00000017555
Ovalentaria	ANCESTRAL SPECIES	18	ENSGT00940000154511.a	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000166683.b	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000170402	ENSGT00940000157361.b	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00910000147025
Ovalentaria_B	ANCESTRAL SPECIES	25	ENSGT00940000154511.a	ENSGT00940000154681.a.f	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411
Pomacentridae	ANCESTRAL SPECIES	36						ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00940000154681.a.f	ENSGT00940000154511.a	ENSGT00950000182909.b.b.b	ENSGT00390000008797	ENSGT00940000153335.a.b	ENSGT01030000234642.a.b.b.d.a.e	ENSGT00510000047589	ENSGT00390000014293.b
Pomacentridae_A	ANCESTRAL SPECIES	196						ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143	ENSGT00940000153566.b	ENSGT00530000068411
Amphiprion	ANCESTRAL SPECIES	45	ENSGT00720000108792.A	ENSGT00940000156782.c	ENSGT00940000161552	ENSGT00940000161907	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000164115.A.f.b.a.a.b.a	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000182466	ENSGT01030000234610.b.a.a #22	ENSGT00940000179143
Orange clownfish	MODERN SPECIES	12	wbp1la (ENSAPEG00000000943) #34	fbxw4 (ENSAPEG00000001006)	ENSAPEG00000001047	fgf8a (ENSAPEG00000001059)	slc2a15a (ENSAPEG00000001082)	ENSAPEG00000001191	ENSAPEG00000001218	ENSAPEG00000001269	ENSAPEG00000001282	ENSAPEG00000001289	tlx1 (ENSAPEG00000001309)	ENSAPEG00000001331	cep68 (ENSAPEG00000001346)	rab1ab (ENSAPEG00000001358)	hells (ENSAPEG00000001422)	CALHM3 (ENSAPEG00000001492) #20	ENSAPEG00000001536	ENSAPEG00000001551	ENSAPEG00000001567	calhm2.1 (ENSAPEG00000001579) #22	ENSAPEG00000001586	ENSAPEG00000001663	nt5c2a (ENSAPEG00000001693)	borcs7 (ENSAPEG00000001760) #32	cyp17a1 (ENSAPEG00000001772) #33	ENSAPEG00000001814	RNF166 (ENSAPEG00000001824)	ctu2 (ENSAPEG00000001847)	ENSAPEG00000001869	cdk1 (ENSAPEG00000001888)	HNRNPLL (ENSAPEG00000001934)
Clown anemonefish	MODERN SPECIES	3596										ENSAOCG00000006462	tlx1 (ENSAOCG00000000305)	ENSAOCG00000000303	cep68 (ENSAOCG00000006423)	rab1ab (ENSAOCG00000006385)	hells (ENSAOCG00000006348)	CALHM3 (ENSAOCG00000006273) #20	ENSAOCG00000006231	calhm2.1 (ENSAOCG00000006221) #22	ENSAOCG00000006209	ncapd3 (ENSAOCG00000006183)	ENSAOCG00000006151	ENSAOCG00000006131
Spiny chromis	MODERN SPECIES	796						wbp1la (ENSAPOG00000007967) #34	fbxw4 (ENSAPOG00000007951)	fgf8a (ENSAPOG00000007933)	slc2a15a (ENSAPOG00000007916)	ENSAPOG00000007830	tlx1 (ENSAPOG00000007816)	ENSAPOG00000007793	cep68 (ENSAPOG00000007771)	rab1ab (ENSAPOG00000007746)	hells (ENSAPOG00000007707)	CALHM3 (ENSAPOG00000007624) #20
Bicolor damselfish	MODERN SPECIES	898								cdh11 (ENSSPAG00000010886)	ENSSPAG00000011408	chrna1 (ENSSPAG00000011422)	ENSSPAG00000011458	ENSSPAG00000011535	ENSSPAG00000011546	mtx2 (ENSSPAG00000011552)	ENSSPAG00000011608	CALHM3 (ENSSPAG00000011653) #20	calhm2.1 (ENSSPAG00000011678) #22	ncapd3 (ENSSPAG00000011704)
Cichlidae	ANCESTRAL SPECIES	201																ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b
Pseudocrenilabrinae	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a.b.b #20
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	65	ENSGT00940000153566.b	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165200	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b.i	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01030000234610.b.a.b.b #20
Haplochromini	ANCESTRAL SPECIES	76	ENSGT00940000153566.b	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00940000165200	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b.i	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01030000234610.b.a.b.b #20
Burton s mouthbrooder	MODERN SPECIES	1025																CALHM3 (ENSHBUG00000009761) #20
Haplochromini_A	ANCESTRAL SPECIES	8	ENSGT00940000153335.a.b	ENSGT00940000153566.b	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b.i	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01030000234610.b.a.b.b #20
P. nyererei	MODERN SPECIES	794																CALHM3 (ENSPNYG00000008151) #20
Haplochromini_B	ANCESTRAL SPECIES	5	ENSGT00940000153566.b	ENSGT01030000235521.b	ENSGT00940000153168.B	ENSGT00510000047676	ENSGT00390000017746	ENSGT00940000157593	ENSGT00700000104522	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b.i	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01030000234610.b.a.b.b #20
Zebra mbuna	MODERN SPECIES	1095	cyp26c1 (ENSMZEG00005003086)	ENSMZEG00005003113	ENSMZEG00005003151	ENSMZEG00005003415	ppp1r3ca (ENSMZEG00005003419)	HECTD2 (ENSMZEG00005003436)	pcgf5a (ENSMZEG00005003485)	ANKRD1 (ENSMZEG00005003491)	ENSMZEG00005003505	hspa12a (ENSMZEG00005003624)	smim7 (ENSMZEG00005003690)	pitx3 (ENSMZEG00005003703)	GBF1 (ENSMZEG00005003745)	macroh2a2 (ENSMZEG00005003876)	ENSMZEG00005003921	CALHM3 (ENSMZEG00005003977) #20	acss1 (ENSMZEG00005004000)	ENSMZEG00005004047	vsx1 (ENSMZEG00005004056)	entpd6 (ENSMZEG00005004067)	AIFM2 (ENSMZEG00005004083)	ninl (ENSMZEG00005004096)	gins1 (ENSMZEG00005004114)	abhd12 (ENSMZEG00005004140)	ENSMZEG00005004164	elovl6l (ENSMZEG00005004171)	ENSMZEG00005004178	ENSMZEG00005004190	ENSMZEG00005004195	ENSMZEG00005004203	ENSMZEG00005004214
Eastern happy	MODERN SPECIES	4	ENSACLG00000005035	ENSACLG00000005072	PDZD8 (ENSACLG00000005404)	slc18a2 (ENSACLG00000005409)	kcnk18 (ENSACLG00000005460)	vax1 (ENSACLG00000005465)	atp6v1ba (ENSACLG00000005481)	shtn1 (ENSACLG00000005896)	eno4 (ENSACLG00000005900)	hspa12a (ENSACLG00000005915)	ENSACLG00000005964	pitx3 (ENSACLG00000005981)	GBF1 (ENSACLG00000006017)	macroh2a2 (ENSACLG00000006212)	ENSACLG00000006417	CALHM3 (ENSACLG00000006418) #20	zswim8 (ENSACLG00000006424)	NDST2 (ENSACLG00000006524)	ENSACLG00000006569	polr1c (ENSACLG00000006573)	fbxo28 (ENSACLG00000006612)	degs1 (ENSACLG00000006626)	nvl (ENSACLG00000006630)	tk2 (ENSACLG00000006650)	ENSACLG00000006658	aprt (ENSACLG00000006659)	CDT1 (ENSACLG00000006664)	PIEZO1 (ENSACLG00000006682)	pcca (ENSACLG00000006725)	ENSACLG00000006768	vps8 (ENSACLG00000007042)
Lyretail cichlid	MODERN SPECIES	468	yipf4 (ENSNBRG00000019091)	exo1 (ENSNBRG00000019048)	ENSNBRG00000019028	ENSNBRG00000019022	PDZD8 (ENSNBRG00000018994)	slc18a2 (ENSNBRG00000018965)	vax1 (ENSNBRG00000018945)	atp6v1ba (ENSNBRG00000018916)	shtn1 (ENSNBRG00000018884)	eno4 (ENSNBRG00000018850)	hspa12a (ENSNBRG00000018638)	pitx3 (ENSNBRG00000018586)	GBF1 (ENSNBRG00000018531)	macroh2a2 (ENSNBRG00000018499)	ENSNBRG00000018492	CALHM3 (ENSNBRG00000018477) #20
Nile tilapia	MODERN SPECIES	4														ENSONIG00000038457	ENSONIG00000009131	CALHM3 (ENSONIG00000037483) #20	ENSONIG00000014004	ENSONIG00000041912	ENSONIG00000039740	ENSONIG00000004493	elp6 (ENSONIG00000004504)	ENSONIG00000038064	ENSONIG00000004507	rasgrp3 (ENSONIG00000004519)	ENSONIG00000029462	ENSONIG00000036068	zswim8 (ENSONIG00000007126)	ENSONIG00000030396	GBF1 (ENSONIG00000009136)	macroh2a2 (ENSONIG00000009134)	ENSONIG00000033885
Midas cichlid	MODERN SPECIES	535															SMCO4 (ENSACIG00000022844)	CALHM3 (ENSACIG00000022827) #20	ncapd3 (ENSACIG00000022761)
Atherinomorphae	ANCESTRAL SPECIES	16	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00990000204611	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Oryzias	ANCESTRAL SPECIES	6	ENSGT00390000000747	ENSGT01100000263502.A.a.b	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094	ENSGT00950000183132.B	ENSGT00390000005029.k	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00940000153246.a.a.b.h	ENSGT00530000068411	ENSGT00940000167270	ENSGT01070000253760.b.a.a.a.b.b	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000154551.b.i	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b	ENSGT00940000161152	ENSGT00390000017697.b	ENSGT00910000144296
Oryzias_b	ANCESTRAL SPECIES	49	ENSGT00390000009948.c	ENSGT00940000155780.k.a	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094	ENSGT00950000183132.B	ENSGT00390000005029.k	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00940000153246.a.a.b.h
Indian medaka	MODERN SPECIES	24	MSL3 (ENSOMEG00000005256)	ENSOMEG00000005324	il1rapl1b (ENSOMEG00000005393)	GPR34 (ENSOMEG00000005418)	caskb (ENSOMEG00000005650)	cenpl (ENSOMEG00000005689)	FUNDC1 (ENSOMEG00000005715)	kdm6al (ENSOMEG00000005822)	ENSOMEG00000005849	rpl4 (ENSOMEG00000005867)	tlx1 (ENSOMEG00000005939)	ENSOMEG00000005974	ENSOMEG00000005999	rab1ab (ENSOMEG00000006036)	hells (ENSOMEG00000000135)	CALHM3 (ENSOMEG00000006111) #20	ENSOMEG00000006121	ENSOMEG00000006135	ENSOMEG00000006145	ENSOMEG00000006332	ADAMTS5 (ENSOMEG00000006372)	ADAMTS1 (ENSOMEG00000006388)	cyyr1 (ENSOMEG00000006402)	APP (ENSOMEG00000006503)	ENSOMEG00000006531	ENSOMEG00000006540	atp5pf (ENSOMEG00000006555)	jam2a (ENSOMEG00000006601)	n6amt1 (ENSOMEG00000006621)	KYNU (ENSOMEG00000006650)	ENSOMEG00000006666
Javanese ricefish	MODERN SPECIES	6	cdc42ep3 (ENSOJAG00000007125)	ENSOJAG00000007137	ENSOJAG00000007161	cyp1b1 (ENSOJAG00000007189)	nanp (ENSOJAG00000007218)	polr1b (ENSOJAG00000007238)	fbxw4 (ENSOJAG00000007376)	fgf8a (ENSOJAG00000007416)	slc2a15a (ENSOJAG00000007503)	tlx1 (ENSOJAG00000007771)	ENSOJAG00000007843	ENSOJAG00000007852	ENSOJAG00000007883	rab1ab (ENSOJAG00000007982)	hells (ENSOJAG00000008349)	CALHM3 (ENSOJAG00000008718) #20	ncapd3 (ENSOJAG00000008815)	stra6l (ENSOJAG00000009728)	ENSOJAG00000009740	opn3 (ENSOJAG00000009755)	kmo (ENSOJAG00000009801)	ide (ENSOJAG00000009987)	ide (ENSOJAG00000011010)	ENSOJAG00000011972	ENSOJAG00000012035	ENSOJAG00000012540	macroh2a2 (ENSOJAG00000012551)	GBF1 (ENSOJAG00000012579)	pitx3 (ENSOJAG00000012831)	hspa12a (ENSOJAG00000012888)	eno4 (ENSOJAG00000013401)
Oryzias_a	ANCESTRAL SPECIES	4	ENSGT00390000000747	ENSGT01100000263502.A.a.b	ENSGT00940000157736	ENSGT00950000182992.a.b.a.a	ENSGT00950000183037.B.a	ENSGT00390000003094	ENSGT00950000183132.B	ENSGT00390000005029.k	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00940000153246.a.a.b.h	ENSGT00530000068411	ENSGT00940000167270	ENSGT01070000253760.b.a.a.a.b.b	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000154551.b.i	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b	ENSGT00940000161152	ENSGT00390000017697.b	ENSGT00910000144296
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	70	ide (ENSOSIG00000015872)	kmo (ENSOSIG00000018798)	opn3 (ENSOSIG00000018802)	cdc42ep3 (ENSOSIG00000018803)	ENSOSIG00000018804	cyp1b1 (ENSOSIG00000018805)	nanp (ENSOSIG00000018806)	fbxw4 (ENSOSIG00000018808)	fgf8a (ENSOSIG00000018810)	slc2a15a (ENSOSIG00000018811)	tlx1 (ENSOSIG00000018812)	ENSOSIG00000018813	ENSOSIG00000018814	rab1ab (ENSOSIG00000018820)	hells (ENSOSIG00000019042)	CALHM3 (ENSOSIG00000003484) #20	ENSOSIG00000003491	CALHM3 (ENSOSIG00000003497) #20	ENSOSIG00000003501
Chinese medaka	MODERN SPECIES	70															ENSOSIG00000003501	CALHM3 (ENSOSIG00000003497) #20	ENSOSIG00000003491	CALHM3 (ENSOSIG00000003484) #20	hells (ENSOSIG00000019042)	rab1ab (ENSOSIG00000018820)	ENSOSIG00000018814	ENSOSIG00000018813	tlx1 (ENSOSIG00000018812)	slc2a15a (ENSOSIG00000018811)	fgf8a (ENSOSIG00000018810)	fbxw4 (ENSOSIG00000018808)	nanp (ENSOSIG00000018806)	cyp1b1 (ENSOSIG00000018805)	ENSOSIG00000018804	cdc42ep3 (ENSOSIG00000018803)	opn3 (ENSOSIG00000018802)
Japanese Medaka HdrR	MODERN SPECIES	6	ENSORLG00000026323	cdc42ep3 (ENSORLG00000000835)	ENSORLG00000030099	ENSORLG00000023798	cyp1b1 (ENSORLG00000000853)	nanp (ENSORLG00000000861)	polr1b (ENSORLG00000000890)	fbxw4 (ENSORLG00000000906)	fgf8a (ENSORLG00000024917)	slc2a15a (ENSORLG00000000924)	tlx1 (ENSORLG00000000935)	ENSORLG00000027360	ENSORLG00000024874	rab1ab (ENSORLG00000028104)	hells (ENSORLG00000000987)	CALHM3 (ENSORLG00000000995) #20	ncapd3 (ENSORLG00000001014)	ENSORLG00000025120	ENSORLG00000028371	ENSORLG00000001051	ENSORLG00000001066	ENSORLG00000027498	ENSORLG00000018201	macroh2a2 (ENSORLG00000001088)	GBF1 (ENSORLG00000001139)	pitx3 (ENSORLG00000027925)	hspa12a (ENSORLG00000001174)	eno4 (ENSORLG00000028334)	shtn1 (ENSORLG00000023645)	atp6v1ba (ENSORLG00000001220)	vax1 (ENSORLG00000027781)
Cyprinodontiformes	ANCESTRAL SPECIES	17	ENSGT00390000008797	ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00990000204611	ENSGT00940000164978.b.c	ENSGT00940000158042	ENSGT00390000005537	ENSGT00940000156983.a.b	ENSGT00940000155134.y.q	ENSGT00950000183045.A.a.a	ENSGT00390000018730.B
Cyprinodontoidei	ANCESTRAL SPECIES	55	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000157361.b
Poeciliinae	ANCESTRAL SPECIES	16	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.i	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000157361.b	ENSGT00390000017697.b	ENSGT00940000160228.i.a.a	ENSGT00940000155345.q	ENSGT00940000157597	ENSGT00940000161234	ENSGT00390000016551	ENSGT00530000063410.a.q.a	ENSGT00940000153464.B.z.b	ENSGT00950000183050.b.b.b.a.a.a.a	ENSGT00940000166587
Poecilia	ANCESTRAL SPECIES	11	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029.i	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a	ENSGT00940000157361.b	ENSGT00390000017697.b	ENSGT01090000260059.a.b.b.a.a.a.a.a.a.b.a.g.a.a.b.a.a.a.a	ENSGT00940000160228.i.a.a	ENSGT00940000155345.q	ENSGT00940000157597	ENSGT00940000161234	ENSGT00390000016551	ENSGT00530000063410.a.q.a	ENSGT00940000153464.B.z.b	ENSGT00950000183050.b.b.b.a.a.a.a
NAME_6	ANCESTRAL SPECIES	479																ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a
Sailfin molly	MODERN SPECIES	1508																CALHM3 (ENSPLAG00000020165) #20	ncapd3 (ENSPLAG00000020191)	ENSPLAG00000020222	RIN2 (ENSPLAG00000020244)	SLC24A3 (ENSPLAG00000020275)
Amazon molly	MODERN SPECIES	823														ENSPFOG00000010617	ENSPFOG00000024258	CALHM3 (ENSPFOG00000010532) #20	ncapd3 (ENSPFOG00000010150)	RIN2 (ENSPFOG00000009975)	ENSPFOG00000009801
Guppy	MODERN SPECIES	445	hspa12a (ENSPREG00000018686)	pitx3 (ENSPREG00000018702)	GBF1 (ENSPREG00000018759)	cyp17a1 (ENSPREG00000019128) #33	borcs7 (ENSPREG00000020069) #32	nt5c2a (ENSPREG00000020101)	ENSPREG00000020136	fgf8a (ENSPREG00000020145)	slc2a15a (ENSPREG00000020156)	ENSPREG00000020178	tlx1 (ENSPREG00000020203)	ENSPREG00000020277	ENSPREG00000020295	rab1ab (ENSPREG00000020321)	hells (ENSPREG00000020337)	CALHM3 (ENSPREG00000020384) #20	ncapd3 (ENSPREG00000020416)	ENSPREG00000020540	RIN2 (ENSPREG00000020566)	ENSPREG00000020598	ENSPREG00000020614	ENSPREG00000020631	ciao2b (ENSPREG00000020644)	ENSPREG00000020655	ENSPREG00000020793	b3gnt2b (ENSPREG00000021300)	EHBP1 (ENSPREG00000021321)	otx1 (ENSPREG00000021337)	WDPCP (ENSPREG00000021349)	MDH1 (ENSPREG00000021368)	ugp2b (ENSPREG00000021393)
Platyfish	MODERN SPECIES	14	GBF1 (ENSXMAG00000005864)	ENSXMAG00000005854	cyp17a1 (ENSXMAG00000005813) #33	borcs7 (ENSXMAG00000025827) #32	nt5c2a (ENSXMAG00000005784)	ENSXMAG00000005779 #34	fbxw4 (ENSXMAG00000027566)	fgf8a (ENSXMAG00000025032)	slc2a15a (ENSXMAG00000003577)	ENSXMAG00000020837	tlx1 (ENSXMAG00000005769)	ENSXMAG00000021357	ENSXMAG00000021554	rab1ab (ENSXMAG00000005757)	hells (ENSXMAG00000005731)	CALHM3 (ENSXMAG00000005726) #20	ncapd3 (ENSXMAG00000005697)	ENSXMAG00000022977	RIN2 (ENSXMAG00000023405)	ENSXMAG00000005661	ENSXMAG00000005660	ENSXMAG00000005658	ciao2b (ENSXMAG00000005652)	ENSXMAG00000005623	b3gnt2b (ENSXMAG00000019808)	EHBP1 (ENSXMAG00000005611)	otx1 (ENSXMAG00000005604)	WDPCP (ENSXMAG00000005591)	MDH1 (ENSXMAG00000005571)	ugp2b (ENSXMAG00000005551)	ENSXMAG00000027229
NAME_4	ANCESTRAL SPECIES	258					ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000154866.B.a	ENSGT01030000234532.A.a.a.b.j.a
Mummichog	MODERN SPECIES	656																CALHM3 (ENSFHEG00000011864) #20	ncapd3 (ENSFHEG00000011817)	ENSFHEG00000011795	ENSFHEG00000011767	RIN2 (ENSFHEG00000011749)	ENSFHEG00000011727
Sheepshead minnow	MODERN SPECIES	344	ENSCVAG00000005838	NDST2 (ENSCVAG00000005826)	zswim8 (ENSCVAG00000005806)	polr1c (ENSCVAG00000005684)	fbxo28 (ENSCVAG00000005662)	degs1 (ENSCVAG00000005639)	nvl (ENSCVAG00000005631)	ENSCVAG00000005613	tk2 (ENSCVAG00000005596)	aprt (ENSCVAG00000005586)	CDT1 (ENSCVAG00000005574)	ENSCVAG00000005547	ENSCVAG00000005475	ENSCVAG00000005464	hells (ENSCVAG00000000159)	CALHM3 (ENSCVAG00000005361) #20	ncapd3 (ENSCVAG00000005353)
Aplocheiloidei	ANCESTRAL SPECIES	75		ENSGT00950000182909.b.b.b	ENSGT00940000155588.b #33	ENSGT00390000015849 #32	ENSGT00940000163289.b.a.b	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A	ENSGT00940000155078.a.b.a.b	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000153566.b	ENSGT00530000068411	ENSGT00940000167270	ENSGT00940000154865	ENSGT00940000158120	ENSGT00940000156925.v	ENSGT00940000154518.b	ENSGT00940000155139	ENSGT00940000154551.b.i	ENSGT00950000182805.a.b	ENSGT00510000048167.a	ENSGT00940000155068.a.b	ENSGT00940000161152	ENSGT00940000170261
Turquoise killifish	MODERN SPECIES	1612	macroh2a2 (ENSNFUG00015001818)	ENSNFUG00015001812	ENSNFUG00015001809	ENSNFUG00015001783	ENSNFUG00015001749	WBP1LA (ENSNFUG00015001688) #34	FBXW4 (ENSNFUG00015001665)	FGF8A (ENSNFUG00015001647)	slc2a15a (ENSNFUG00015001603)	ENSNFUG00015001570	tlx1 (ENSNFUG00015001561)	ENSNFUG00015001556	ENSNFUG00015001550	rab1ab (ENSNFUG00015001545)	HELLS (ENSNFUG00015001451)	CALHM3 (ENSNFUG00015001415) #20	NT5C2A (ENSNFUG00015001389)	ENSNFUG00015001372	cyp17a1 (ENSNFUG00015001215) #33	RIN2 (ENSNFUG00015001140)	zgc:175280 (ENSNFUG00015001044)	ENSNFUG00015001026	CDC42EP3 (ENSNFUG00015001023)	ENSNFUG00015001015	cyp1b1 (ENSNFUG00015001007)	NANP (ENSNFUG00015001004)	polr1b (ENSNFUG00015000987)	PCGF6 (ENSNFUG00015000970) #26	XPO1B (ENSNFUG00015000944)	SANBR (ENSNFUG00015000927)	PEX13 (ENSNFUG00015000916)
Mangrove rivulus	MODERN SPECIES	60	ENSKMAG00000017797	RNF166 (ENSKMAG00000017768)	cyp17a1 (ENSKMAG00000017730) #33	borcs7 (ENSKMAG00000017712) #32	nt5c2a (ENSKMAG00000017632)	wbp1la (ENSKMAG00000017540) #34	fbxw4 (ENSKMAG00000017521)	fgf8a (ENSKMAG00000017503)	slc2a15a (ENSKMAG00000017465)	ENSKMAG00000017448	tlx1 (ENSKMAG00000017438)	ENSKMAG00000017422	ENSKMAG00000017386	rab1ab (ENSKMAG00000017357)	hells (ENSKMAG00000017279)	CALHM3 (ENSKMAG00000017261) #20	calhm2.1 (ENSKMAG00000017248) #22	ncapd3 (ENSKMAG00000017218)	ENSKMAG00000017194	ENSKMAG00000017167	ENSKMAG00000017115	ENSKMAG00000016977	macroh2a2 (ENSKMAG00000016927)	GBF1 (ENSKMAG00000016781)	pitx3 (ENSKMAG00000016734)	PNLIPRP2 (ENSKMAG00000016665)	hspa12a (ENSKMAG00000016576)	eno4 (ENSKMAG00000016525)	shtn1 (ENSKMAG00000016499)	atp6v1ba (ENSKMAG00000016461)	vax1 (ENSKMAG00000016441)
Cod	MODERN SPECIES	6	SLC18A2 (ENSGMOG00000000199)	kcnk18 (ENSGMOG00000029708)	vax1 (ENSGMOG00000033199)	atp6v1ba (ENSGMOG00000000178)	shtn1 (ENSGMOG00000024092)	eno4 (ENSGMOG00000015450)	hspa12a (ENSGMOG00000005300)	PNLIPRP2 (ENSGMOG00000007955)	pitx3 (ENSGMOG00000037230)	ENSGMOG00000007931	macroh2a2 (ENSGMOG00000007928)	ENSGMOG00000025595	ENSGMOG00000033488	ENSGMOG00000031326	hells (ENSGMOG00000017884)	ENSGMOG00000017916 #20	ENSGMOG00000017930 #22	ENSGMOG00000036392	ENSGMOG00000026927	ENSGMOG00000012670 #26	ENSGMOG00000012677 #27	ENSGMOG00000016016	ENSGMOG00000016203 #13	ENSGMOG00000016222 #13	sfr1 (ENSGMOG00000016280) #14	ENSGMOG00000016289	slka (ENSGMOG00000016391) #16	SH3PXD2A (ENSGMOG00000026660) #18	ENSGMOG00000016447 ##19	ENSGMOG00000016469 ##7	ENSGMOG00000016509 ##7
Protacanthopterygii	ANCESTRAL SPECIES	88	ENSGT00700000104522	ENSGT01030000234606.a.a.a.b	ENSGT00940000161152	ENSGT00940000155068.a.b	ENSGT00510000048167.a	ENSGT00950000182805.a.b	ENSGT00940000154551.b	ENSGT00940000155139	ENSGT00940000154518.b	ENSGT00940000156925.v	ENSGT00940000158120	ENSGT01000000215701	ENSGT00940000154865	ENSGT00940000167270	ENSGT00740000115593	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.a #34	ENSGT00390000005029	ENSGT00940000159518.a	ENSGT00940000164095.a	ENSGT00940000164611.a.b	ENSGT00940000158698	ENSGT00390000009155	ENSGT00810000125473.A
Salmoninae	ANCESTRAL SPECIES	82	ENSGT00940000154877.B.a.a	ENSGT01100000263502.B.a.a.d.a.a.d	ENSGT00940000155571.A.g.b	ENSGT00950000183027.a.b.c.a.a	ENSGT00950000183054.b.d.i	ENSGT00940000155078.a.b.a.b.g.b	ENSGT00810000125473.A.d	ENSGT00390000009155.c	ENSGT00940000158698.b.b	ENSGT00940000164611.a.b.b	ENSGT00940000159518.a.c	ENSGT00390000005029.h	ENSGT00940000158034.r #26	ENSGT00940000166025.b.a	ENSGT00740000115593.d	ENSGT01030000234610.b.a.b.b #20	ENSGT00940000167270.e	ENSGT00940000154865	ENSGT01000000215701	ENSGT00940000158120.i	ENSGT00940000156925.v.k.a	ENSGT00940000156925.v.l	ENSGT00940000154518.b.d	ENSGT00940000154551.b.l.a	ENSGT00950000182805.a.b	ENSGT00940000155068.a.b.d	ENSGT00940000161152.d	ENSGT01030000234606.a.a.a.b.j	ENSGT00700000104522.d	ENSGT00940000157593.s	ENSGT00390000017746.l
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000154877.B.a.a	ENSGT01100000263502.B.a.a.d.a.a.d	ENSGT00940000155571.A.g.b	ENSGT00950000183027.a.b.c.a.a	ENSGT00950000183054.b.d.i	ENSGT00940000155078.a.b.a.b.g.b	ENSGT00810000125473.A.d	ENSGT00390000009155.c	ENSGT00940000158698.b.b	ENSGT00940000164611.a.b.b	ENSGT00940000159518.a.c	ENSGT00390000005029.h	ENSGT00940000158034.r #26	ENSGT00940000166025.b.a	ENSGT00740000115593.d	ENSGT01030000234610.b.a.b.b.c #20	ENSGT00940000167270.e	ENSGT00940000154865.vb.a	ENSGT00940000158120.i	ENSGT00940000156925.v.k.a	ENSGT00940000154518.b.d	ENSGT00940000154551.b.l.a	ENSGT00950000182805.a.b	ENSGT00940000155068.a.b.d	ENSGT00940000161152.d	ENSGT01030000234606.a.a.a.b.j	ENSGT00700000104522.d	ENSGT00940000157593.s	ENSGT00390000017746.l	ENSGT00940000165200.f	ENSGT00940000153168.B.a
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT01100000263502.B.a.a.d.a.a.d	ENSGT00940000155571.A.g.b	ENSGT00950000183027.a.b.c.a.a	ENSGT00950000183054.b.d.i	ENSGT00950000183045.C.mb.b	ENSGT00940000155078.a.b.a.b.g.b	ENSGT00810000125473.A.d	ENSGT00390000009155.c	ENSGT00940000158698.b.b	ENSGT00940000164611.a.b.b	ENSGT00940000159518.a.c	ENSGT00390000005029.h	ENSGT00940000158034.r #26	ENSGT00940000166025.b.a	ENSGT00740000115593.d	ENSGT01030000234610.b.a.b.b.c #20	ENSGT00940000167270.e	ENSGT00940000154865.vb.a	ENSGT00940000158120.i	ENSGT00940000156925.v.k.a	ENSGT00940000154518.b.d	ENSGT00940000154551.b.l.a	ENSGT00950000182805.a.b	ENSGT00940000155068.a.b.d	ENSGT00940000161152.d	ENSGT01030000234606.a.a.a.b.j	ENSGT00700000104522.d	ENSGT00940000157593.s	ENSGT00390000017746.l	ENSGT00940000165200.f	ENSGT00940000153168.B.a
Rainbow trout	MODERN SPECIES	15	usp54a (ENSOMYG00000042157)	myoz1a (ENSOMYG00000042165)	ENSOMYG00000069512	ENSOMYG00000042176	ENSOMYG00000042180	ENSOMYG00000042216	ENSOMYG00000042335	ENSOMYG00000042337	tlx1 (ENSOMYG00000042338)	ENSOMYG00000042342	fgf8a (ENSOMYG00000042351)	fbxw4 (ENSOMYG00000042367)	ENSOMYG00000042394 #26	ENSOMYG00000042401	ENSOMYG00000042443	ENSOMYG00000042758 #20	ENSOMYG00000042781	ENSOMYG00000077179	macroh2a2 (ENSOMYG00000042807)	ENSOMYG00000042851	ENSOMYG00000059612	pitx3 (ENSOMYG00000042905)	hspa12a (ENSOMYG00000026525)	eno4 (ENSOMYG00000026607)	ENSOMYG00000077730	atp6v1ba (ENSOMYG00000027282)	vax1 (ENSOMYG00000029820)	ENSOMYG00000029834	kcnk18 (ENSOMYG00000076015)	SLC18A2 (ENSOMYG00000030075)	PDZD8 (ENSOMYG00000030310)
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT01100000263502.B.a.a.d.a.a.d	ENSGT00940000155571.A.g.b	ENSGT00950000183027.a.b.c.a.a	ENSGT00950000183054.b.d.i	ENSGT00950000183045.C.mb.b	ENSGT00940000155078.a.b.a.b.g.b	ENSGT00810000125473.A.d	ENSGT00390000009155.c	ENSGT00940000158698.b.b	ENSGT00940000164611.a.b.b	ENSGT00940000159518.a.c	ENSGT00390000005029.h	ENSGT00940000158034.r #26	ENSGT00940000166025.b.a	ENSGT00740000115593.d	ENSGT01030000234610.b.a.b.b.c #20	ENSGT00940000167270.e	ENSGT00940000158120.i	ENSGT00940000156925.v.k.a	ENSGT00940000154518.b.d	ENSGT00940000154551.b.l.a	ENSGT00950000182805.a.b	ENSGT00940000155068.a.b.d	ENSGT00940000161152.d	ENSGT01030000234606.a.a.a.b.j	ENSGT00700000104522.d	ENSGT00940000157593.s	ENSGT00390000017746.l	ENSGT00940000165200.f	ENSGT00940000153168.B.a	ENSGT00940000156126.a
Coho salmon	MODERN SPECIES	2	ldb3a (ENSOKIG00005048125)	opn4a (ENSOKIG00005048102)	myoz1a (ENSOKIG00005048094)	SYNPO2L (ENSOKIG00005048087)	zgc:153169 (ENSOKIG00005048056)	ENSOKIG00005048047	ENSOKIG00005048043	tlx1 (ENSOKIG00005048040)	ENSOKIG00005048037	ENSOKIG00005048035	fgf8a (ENSOKIG00005048027)	fbxw4 (ENSOKIG00005047999)	ENSOKIG00005047981 #26	ENSOKIG00005047965	hells (ENSOKIG00005047721)	CALHM3 (ENSOKIG00005047689) #20	ENSOKIG00005047665	ENSOKIG00005047628	ENSOKIG00005047612	macroh2a2 (ENSOKIG00005047591)	GBF1 (ENSOKIG00005047404)	pitx3 (ENSOKIG00005047372)	hspa12a (ENSOKIG00005047314)	eno4 (ENSOKIG00005047294)	atp6v1ba (ENSOKIG00005047038)	vax1 (ENSOKIG00005046994)	ENSOKIG00005046965	kcnk18 (ENSOKIG00005046949)	SLC18A2 (ENSOKIG00005046818)	PDZD8 (ENSOKIG00005046777)	ENSOKIG00005046768
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000154877.B.a.a	ENSGT01100000263502.B.a.a.d.a.a.d	ENSGT00940000155571.A.g.b	ENSGT00950000183027.a.b.c.a.a	ENSGT00950000183054.b.d.i	ENSGT00940000155078.a.b.a.b.g.b	ENSGT00810000125473.A.d	ENSGT00390000009155.c	ENSGT00940000158698.b.b	ENSGT00940000164611.a.b.b	ENSGT00940000159518.a.c	ENSGT00390000005029.h	ENSGT00940000158034.r #26	ENSGT00940000166025.b.a	ENSGT00740000115593.d	ENSGT01030000234610.b.a.b.b.c #20	ENSGT00940000167270.e	ENSGT00940000154865.vb.a	ENSGT00940000158120.i	ENSGT00940000156925.v.k.a	ENSGT00940000154518.b.d	ENSGT00940000154551.b.l.a	ENSGT00950000182805.a.b	ENSGT00940000155068.a.b.d	ENSGT00940000161152.d	ENSGT00700000104522.d	ENSGT00940000157593.s	ENSGT00390000017746.l	ENSGT00940000165200.f	ENSGT00940000153168.B.a	ENSGT00940000156126.a
River trout	MODERN SPECIES	9	ldb3a (ENSSTUG00000031482)	opn4a (ENSSTUG00000031800)	myoz1a (ENSSTUG00000031839)	SYNPO2L (ENSSTUG00000031861)	zgc:153169 (ENSSTUG00000031867)	ENSSTUG00000031891	cep68 (ENSSTUG00000032111)	ENSSTUG00000032122	tlx1 (ENSSTUG00000032131)	ENSSTUG00000032153	fgf8a (ENSSTUG00000032164)	fbxw4 (ENSSTUG00000032200)	pcgf6 (ENSSTUG00000032319) #26	ENSSTUG00000032338	hells (ENSSTUG00000032377)	CALHM3 (ENSSTUG00000033080) #20	ENSSTUG00000033111	macroh2a2 (ENSSTUG00000033196)	GBF1 (ENSSTUG00000033240)	pitx3 (ENSSTUG00000033791)	hspa12a (ENSSTUG00000033806)	eno4 (ENSSTUG00000034029)	ENSSTUG00000034039	atp6v1ba (ENSSTUG00000034054)	vax1 (ENSSTUG00000034155)	kcnk18 (ENSSTUG00000034165)	slc18a2 (ENSSTUG00000034186)	PDZD8 (ENSSTUG00000034458)	ENSSTUG00000034471	yipf4 (ENSSTUG00000034479)	BIRC6 (ENSSTUG00000034521)
Salmoninae_a	ANCESTRAL SPECIES	11	ENSGT00940000165200.e	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000154865.vb.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b
Salmo	ANCESTRAL SPECIES	29	ENSGT00940000165200.e	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000154865.vb.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b
Atlantic salmon	MODERN SPECIES	9	PDZD8 (ENSSSAG00000076238)	SLC18A2 (ENSSSAG00000076093)	kcnk18 (ENSSSAG00000093804)	pla2g4f (ENSSSAG00000076076)	vax1 (ENSSSAG00000101324)	atp6v1ba (ENSSSAG00000076022)	shtn1 (ENSSSAG00000076009)	hspa12a (ENSSSAG00000001820)	ENSSSAG00000075958	H2AW (ENSSSAG00000074192)	ENSSSAG00000074264	ENSSSAG00000074170	ENSSSAG00000074124	ENSSSAG00000085939	ENSSSAG00000072792	ENSSSAG00000072757 #20	ENSSSAG00000101552 #22	pcgf6 (ENSSSAG00000072746) #26	inaa (ENSSSAG00000072742) #27	nt5c2a (ENSSSAG00000069977)	borcs7 (ENSSSAG00000119087) #32	cyp17a1 (ENSSSAG00000069890) #33	fbxw4 (ENSSSAG00000069868)	fgf8a (ENSSSAG00000098674)	slc2a15a (ENSSSAG00000069641)	ENSSSAG00000069628	ENSSSAG00000069622	ENSSSAG00000069615	ENSSSAG00000069562	ENSSSAG00000069556	ENSSSAG00000069555
River trout	MODERN SPECIES	35	ENSSTUG00000002918	PDZD8 (ENSSTUG00000002940)	slc18a2 (ENSSTUG00000002972)	ENSSTUG00000003210	ENSSTUG00000003218	vax1 (ENSSTUG00000003279)	atp6v1ba (ENSSTUG00000003351)	shtn1 (ENSSTUG00000004139)	hspa12a (ENSSTUG00000004185)	pitx3 (ENSSTUG00000004502)	GBF1 (ENSSTUG00000004539)	macroh2a2 (ENSSTUG00000004938)	ENSSTUG00000004984	ENSSTUG00000005002	hells (ENSSTUG00000005197)	CALHM3 (ENSSTUG00000006872) #20	calhm2.1 (ENSSTUG00000006901) #22	ENSSTUG00000006905	pcgf6 (ENSSTUG00000006916) #26	inaa (ENSSTUG00000006947) #27	nt5c2a (ENSSTUG00000006989)	borcs7 (ENSSTUG00000007494) #32	cyp17a1 (ENSSTUG00000007509) #33	fbxw4 (ENSSTUG00000007530)	fgf8a (ENSSTUG00000007553)	slc2a15a (ENSSTUG00000007570)	ENSSTUG00000007746	tlx1 (ENSSTUG00000007752)	ENSSTUG00000007767	cep68 (ENSSTUG00000007773)	ENSSTUG00000007786
Oncorhynchus	ANCESTRAL SPECIES	2	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT00940000165789	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000158302.d.a.j.b	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	1	ENSGT00940000154902.tb.a.a	ENSGT00940000165200.e	ENSGT00390000017746.k	ENSGT00940000157593.t	ENSGT00700000104522.c	ENSGT01030000234606.a.a.a.b.i	ENSGT00940000161152.c	ENSGT00940000155068.a.b.c	ENSGT00510000048167.a	ENSGT00940000154551.b.l.b	ENSGT00940000154518.b.c	ENSGT00940000156925.v.k.b	ENSGT00940000158120.j	ENSGT00940000167270.f	ENSGT00740000115593.c	ENSGT01030000234610.b.a.b.b.d #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b.b	ENSGT00940000158034.q #26	ENSGT00940000154418.a.a.a #27	ENSGT00940000163289.b.a.b	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00390000005029.g	ENSGT00940000159518.a.d	ENSGT00940000164095.a	ENSGT00940000164611.a.b.a	ENSGT00940000158698.b.a	ENSGT00390000009155.d	ENSGT00810000125473.A.c	ENSGT00940000155078.a.b.a.b.g.a.b
Coho salmon	MODERN SPECIES	24	PDZD8 (ENSOKIG00005011782)	slc18a2 (ENSOKIG00005011345)	ENSOKIG00005011313	ENSOKIG00005011296	vax1 (ENSOKIG00005011277)	atp6v1ba (ENSOKIG00005010025)	shtn1 (ENSOKIG00005009885)	hspa12a (ENSOKIG00005009791)	pitx3 (ENSOKIG00005009765)	GBF1 (ENSOKIG00005009693)	macroh2a2 (ENSOKIG00005009648)	ENSOKIG00005009641	ENSOKIG00005009632	ENSOKIG00005009572	hells (ENSOKIG00005009326)	ENSOKIG00005009251 #20	calhm2.1 (ENSOKIG00005009238) #22	ENSOKIG00005009221	pcgf6 (ENSOKIG00005009188) #26	inaa (ENSOKIG00005009179) #27	nt5c2a (ENSOKIG00005008775)	borcs7 (ENSOKIG00005008726) #32	cyp17a1 (ENSOKIG00005008708) #33	fbxw4 (ENSOKIG00005008688)	fgf8a (ENSOKIG00005008657)	slc2a15a (ENSOKIG00005007891)	ENSOKIG00005007829	tlx1 (ENSOKIG00005007814)	ENSOKIG00005007807	cep68 (ENSOKIG00005007798)	ENSOKIG00005007623
Huchen	MODERN SPECIES	122	ENSHHUG00000034253	myoz1a (ENSHHUG00000034248)	SYNPO2L (ENSHHUG00000034243)	zgc:153169 (ENSHHUG00000034231)	ENSHHUG00000033859	cep68 (ENSHHUG00000033851)	ENSHHUG00000033850	tlx1 (ENSHHUG00000033847)	ENSHHUG00000033846	fgf8a (ENSHHUG00000033818)	ENSHHUG00000033805	ENSHHUG00000033802	pcgf6 (ENSHHUG00000033799) #26	ENSHHUG00000033727	hells (ENSHHUG00000033611)	CALHM3 (ENSHHUG00000033600) #20	ENSHHUG00000033576	ENSHHUG00000033542	ENSHHUG00000033537	macroh2a2 (ENSHHUG00000033523)	ENSHHUG00000033244
Northern pike	MODERN SPECIES	5	PDZD8 (ENSELUG00000013841)	slc18a2 (ENSELUG00000013933)	ENSELUG00000013969	vax1 (ENSELUG00000014001)	atp6v1ba (ENSELUG00000014059)	shtn1 (ENSELUG00000001085)	eno4 (ENSELUG00000014183)	hspa12a (ENSELUG00000014254)	PNLIPRP2 (ENSELUG00000014287)	pitx3 (ENSELUG00000014303)	GBF1 (ENSELUG00000014474)	macroh2a2 (ENSELUG00000014527)	ENSELUG00000025259	ENSELUG00000014562	hells (ENSELUG00000014909)	CALHM3 (ENSELUG00000014947) #20	calhm2.1 (ENSELUG00000014966) #22	ENSELUG00000014991	pcgf6 (ENSELUG00000015010) #26	inaa (ENSELUG00000015029) #27	nt5c2a (ENSELUG00000015147)	borcs7 (ENSELUG00000015228) #32	ENSELUG00000001250 #33	ENSELUG00000015261 #33	cyp17a1 (ENSELUG00000014836) #33	fbxw4 (ENSELUG00000015291)	fgf8a (ENSELUG00000015308)	slc2a15a (ENSELUG00000000563)	ENSELUG00000015360	tlx1 (ENSELUG00000015373)	ENSELUG00000024705
Otomorpha	ANCESTRAL SPECIES	191								ENSGT00940000162682.A.a.b.b.b	ENSGT00940000156184.b #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00940000154418.a.a.b #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00950000183109.c.a.a.a.b #34	ENSGT00940000158515	ENSGT00390000014031	ENSGT00940000159518.b
Clupeiformes	ANCESTRAL SPECIES	741																ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b
Atlantic herring	MODERN SPECIES	4	ddx43 (ENSCHAG00000027750)	CGAS (ENSCHAG00000027752) ##10	CGAS (ENSCHAG00000027756) ##10	EEF1A1 (ENSCHAG00000027762)	slc17a5 (ENSCHAG00000027772)	FAM98A (ENSCHAG00000027781)	rasgrp3 (ENSCHAG00000027785)	LTBP1 (ENSCHAG00000027822)	ttc27 (ENSCHAG00000027846)	BIRC6 (ENSCHAG00000027855)	BICC1 (ENSCHAG00000027860)	phyhipla (ENSCHAG00000027861)	slc18a2 (ENSCHAG00000027862)	ENSCHAG00000027864	GCNT3 (ENSCHAG00000027866)	CALHM3 (ENSCHAG00000027867) #20	CALHM2 (ENSCHAG00000027869) #22	CALHM2 (ENSCHAG00000000402) #22	ENSCHAG00000000467	ENSCHAG00000000732	malb (ENSCHAG00000000844)	ENSCHAG00000000931	mrps5 (ENSCHAG00000001150)	slc8a1b (ENSCHAG00000001685)	trim8a (ENSCHAG00000001725) #37	sufu (ENSCHAG00000001799)	ENSCHAG00000002897	SEMA4G (ENSCHAG00000002969)	znhit1 (ENSCHAG00000003213)	TWNK (ENSCHAG00000003234)	lzts2a (ENSCHAG00000003255)
Denticle herring	MODERN SPECIES	11	dnajc12 (ENSDCDG00000032537)	cox5b2 (ENSDCDG00000032540)	HERC4 (ENSDCDG00000032560)	ENSDCDG00000032698	ENSDCDG00000032701	mlh1 (ENSDCDG00000032704)	lrrfip2 (ENSDCDG00000032716)	ENSDCDG00000032738	ATE1 (ENSDCDG00000032749)	fgfr2 (ENSDCDG00000032762)	ENSDCDG00000000173	fgfr2 (ENSDCDG00000000206)	ENSDCDG00000000216	ybx1 (ENSDCDG00000000234)	ENSDCDG00000000260	CALHM3 (ENSDCDG00000000269) #20	ENSDCDG00000000287	ENSDCDG00000000295	ENSDCDG00000000308	drgx (ENSDCDG00000000317)	ERCC6 (ENSDCDG00000000342)	cxcl12a (ENSDCDG00000000379)	CALHM1 (ENSDCDG00000000383) #21	ENSDCDG00000000389	oga (ENSDCDG00000000471)	npm3 (ENSDCDG00000000587)	trim8a (ENSDCDG00000000590) #37	sufu (ENSDCDG00000000603)	ENSDCDG00000000626	lzts2a (ENSDCDG00000000637)	pdzd7a (ENSDCDG00000000681)
Otophysi	ANCESTRAL SPECIES	25	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT00940000163896	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166377.e	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9	ENSGT00940000156696.B #19
Channel catfish	MODERN SPECIES	22	cfap43 (ENSIPUG00000020810) #13	ENSIPUG00000020873	slka (ENSIPUG00000020996) #16	si:ch211-223p8.8 (ENSIPUG00000021038)	zgc:153981 (ENSIPUG00000021042)	DUSP13 (ENSIPUG00000021047)	CALHM1 (ENSIPUG00000021054) #21	kat6b (ENSIPUG00000021062)	adk (ENSIPUG00000021067)	AP3M1 (ENSIPUG00000021086)	vcl (ENSIPUG00000021114)	plau (ENSIPUG00000021154)	chuk (ENSIPUG00000021170)	gsto1 (ENSIPUG00000021201) #12	itprip (ENSIPUG00000021212) #10	CALHM3 (ENSIPUG00000021217) #20	CALHM1 (ENSIPUG00000021223) #21	calhm2.1 (ENSIPUG00000021233) #22	ENSIPUG00000021238	atoh7 (ENSIPUG00000021250)	PKD2L1 (ENSIPUG00000021253)	tial1 (ENSIPUG00000021261)	bag3 (ENSIPUG00000021263)	inpp5f (ENSIPUG00000021274)	mcmbp (ENSIPUG00000021364)	Sec23ip (ENSIPUG00000021437)	CSGALNACT2 (ENSIPUG00000021464)	ret (ENSIPUG00000021488)	si:dkey-192p21.6 (ENSIPUG00000021544)	pcbd1 (ENSIPUG00000021570)	sgpl1 (ENSIPUG00000021596)
Characiphysae_b	ANCESTRAL SPECIES	29	ENSGT00390000018550 #14	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Characoidei	ANCESTRAL SPECIES	19	ENSGT00390000018550 #14	ENSGT00940000168136	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.C	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a	ENSGT00940000164716.C.c	ENSGT00940000164982.b	ENSGT00390000000483.a.b	ENSGT00390000017909.a	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7
Mexicana tetra	MODERN SPECIES	17	erlin1 (ENSAMXG00000042976)	sfr1 (ENSAMXG00000034781) #14	ENSAMXG00000003674	slka (ENSAMXG00000004807) #16	si:ch211-223p8.8 (ENSAMXG00000037235)	dusp13a (ENSAMXG00000031015)	ENSAMXG00000031917	KAT6B (ENSAMXG00000004803)	adka (ENSAMXG00000043014)	ap3m1 (ENSAMXG00000004796)	vcla (ENSAMXG00000004789)	plaua (ENSAMXG00000004782)	chuk (ENSAMXG00000004769)	ENSAMXG00000036436	itprip (ENSAMXG00000025968) #10	CALHM3 (ENSAMXG00000029276) #20	CALHM1 (ENSAMXG00000004757) #21	calhm2.1 (ENSAMXG00000004756) #22	ENSAMXG00000038164	atoh7 (ENSAMXG00000025967)	PKD2L1 (ENSAMXG00000004742)	tial1 (ENSAMXG00000038511)	bag3 (ENSAMXG00000004732)	inpp5f (ENSAMXG00000004725)	mcmbp (ENSAMXG00000004722)	sec23ip (ENSAMXG00000004712)	csgalnact2 (ENSAMXG00000004707)	ret (ENSAMXG00000004705)	si:dkey-192p21.6 (ENSAMXG00000004698)	pcbd1 (ENSAMXG00000030052)	sgpl1 (ENSAMXG00000004674)
Red-bellied piranha	MODERN SPECIES	45	sfr1 (ENSPNAG00000014101) #14	ENSPNAG00000014217	slka (ENSPNAG00000003068) #16	si:ch211-223p8.8 (ENSPNAG00000003074)	zgc:153981 (ENSPNAG00000003075)	dusp13a (ENSPNAG00000014306)	ENSPNAG00000014321	KAT6B (ENSPNAG00000003109)	adka (ENSPNAG00000014449)	ap3m1 (ENSPNAG00000014489)	vcla (ENSPNAG00000014585)	plaua (ENSPNAG00000014603)	chuk (ENSPNAG00000014647)	gsto2 (ENSPNAG00000014672) #12	itprip (ENSPNAG00000014679) #10	CALHM3 (ENSPNAG00000003213) #20	CALHM1 (ENSPNAG00000014696) #21	calhm2.1 (ENSPNAG00000014705) #22	ENSPNAG00000014735	ENSPNAG00000014738	atoh7 (ENSPNAG00000014747)	PKD2L1 (ENSPNAG00000014784)	tial1 (ENSPNAG00000003272)	bag3 (ENSPNAG00000003286)	inpp5f (ENSPNAG00000003318)	mcmbp (ENSPNAG00000014983)	sec23ip (ENSPNAG00000014993)	csgalnact2 (ENSPNAG00000015022)	ret (ENSPNAG00000015122)	si:dkey-192p21.6 (ENSPNAG00000015170)	ENSPNAG00000015206
Electric eel	MODERN SPECIES	287	ENSEEEG00000002295 #13	sfr1 (ENSEEEG00000002293) #14	slka (ENSEEEG00000000739) #16	si:ch211-223p8.8 (ENSEEEG00000000083)	zgc:153981 (ENSEEEG00000000077)	dusp13a (ENSEEEG00000000071)	ENSEEEG00000000064	KAT6B (ENSEEEG00000000059)	adka (ENSEEEG00000023791)	ap3m1 (ENSEEEG00000023774)	vcla (ENSEEEG00000023750)	plaua (ENSEEEG00000023745)	chuk (ENSEEEG00000023706)	gsto2 (ENSEEEG00000023696) #12	itprip (ENSEEEG00000023695) #10	CALHM3 (ENSEEEG00000023694) #20	CALHM1 (ENSEEEG00000023692) #21
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000156184.b #16	ENSGT00940000162682.A.a.b.b.b	ENSGT00940000162682.A.a.b.a	ENSGT00940000154628.A.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372	ENSGT00390000014320.c.b	ENSGT00940000158184	ENSGT01030000234543.D.m	ENSGT00940000164426.d	ENSGT00950000182937.A.a.o	ENSGT00940000155351.a #12	ENSGT00940000163896	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a.f #22	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377.f	ENSGT00940000153342.a #25	ENSGT00520000055635.c.a.a.a.e	ENSGT01020000231101	ENSGT00520000055635.c.a.a.a.f	ENSGT00940000164716.C.c.b	ENSGT00390000000483.a.b	ENSGT00940000180035	ENSGT01030000234563.b.a.b.a.a.c.a ##7	ENSGT01030000234563.b.a.b.a.b.a ##7	ENSGT00530000063534.b #9
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	255						ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000155351.a #12	ENSGT00940000155351.b #12	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.e.a #22	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274	ENSGT00940000154962.B.o.a	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e
Goldfish	MODERN SPECIES	31	slka (ENSCARG00000025373) #16	si:ch211-223p8.8 (ENSCARG00000025305)	zgc:153981 (ENSCARG00000025278)	dusp13a (ENSCARG00000025220)	KAT6B (ENSCARG00000025130)	ENSCARG00000025085	ENSCARG00000025064	adka (ENSCARG00000024900)	ap3m1 (ENSCARG00000024857)	vcla (ENSCARG00000022981)	plaua (ENSCARG00000024413)	chuk (ENSCARG00000022486)	gsto1 (ENSCARG00000022430) #12	gsto2 (ENSCARG00000022424) #12	itprip (ENSCARG00000022419) #10	CALHM3 (ENSCARG00000022411) #20	CALHM1 (ENSCARG00000022404) #21	CALHM2 (ENSCARG00000022392) #22	calhm2.1 (ENSCARG00000022389) #22	ENSCARG00000022371	ENSCARG00000022359	atoh7 (ENSCARG00000022355)	PKD2L1 (ENSCARG00000022338)	tial1 (ENSCARG00000022215)	bag3 (ENSCARG00000022204)	inpp5f (ENSCARG00000020211)	mcmbp (ENSCARG00000019437)	sec23ip (ENSCARG00000018268)	csgalnact2 (ENSCARG00000018221)	ret (ENSCARG00000016835)	ENSCARG00000016780
Cyprininae_a	ANCESTRAL SPECIES	101	ENSGT00390000018550 #14	ENSGT00940000156184.b.b #16	ENSGT00940000156184.b.a #16	ENSGT00940000162682.A.a.b.b.b.a	ENSGT00940000162682.A.a.b.a.a	ENSGT00940000154628.A.a.a.a.a	ENSGT00940000154628.A.a.b.d	ENSGT00940000157372.x	ENSGT00390000014320.c.b.f	ENSGT00940000158184.p	ENSGT01030000234543.D.m.b	ENSGT00940000164426.d.b	ENSGT00950000182937.A.a.o.d	ENSGT00940000163896.j.b	ENSGT01050000244827.D.b.b.a.c #10	ENSGT01030000234610.b.a.b.b.e #20	ENSGT01030000234610.b.a.b.a.n.b #21	ENSGT01030000234610.b.a.a.f.a #22	ENSGT01030000234610.b.a.a.e.b #22	ENSGT00940000166025.b.d	ENSGT00940000166377.e	ENSGT00940000166025.b.c	ENSGT00940000161556	ENSGT00940000157274.c	ENSGT00940000154962.B.o.a	ENSGT00940000160482	ENSGT00940000159204.h	ENSGT00940000155996.c	ENSGT00390000017265.a.b	ENSGT00940000156602.e	ENSGT01050000244968.d.p
Common carp reference	MODERN SPECIES	48	ENSCCRG00000075152	slka (ENSCCRG00000062992) #16	dusp13a (ENSCCRG00000063186)	ENSCCRG00000001665	KAT6B (ENSCCRG00000076159)	adka (ENSCCRG00000035773)	ap3m1 (ENSCCRG00000064818)	vcla (ENSCCRG00000007539)	ENSCCRG00000067872	ENSCCRG00000070787	plaua (ENSCCRG00000005596)	chuk (ENSCCRG00000005719)	ENSCCRG00000009407	ENSCCRG00000009650	itprip (ENSCCRG00000055969) #10	CALHM3 (ENSCCRG00000011575) #20	ENSCCRG00000048006 #21	CALHM2 (ENSCCRG00000079939) #22	calhm2.1 (ENSCCRG00000079601) #22	ENSCCRG00000079239	ENSCCRG00000000125	atoh7 (ENSCCRG00000074674)	ENSCCRG00000000176	tial1 (ENSCCRG00000038311)	inpp5f (ENSCCRG00000001168)	mcmbp (ENSCCRG00000007459)	sec23ip (ENSCCRG00000009707)	csgalnact2 (ENSCCRG00000011272)	ret (ENSCCRG00000011287)	si:dkey-192p21.6 (ENSCCRG00000060984)	pcbd1 (ENSCCRG00000061538)
Golden-line barbel	MODERN SPECIES	4093																CALHM3 (ENSSGRG00000005954) #20
Cyprininae	ANCESTRAL SPECIES	1120														ENSGT00940000163896.j.a	ENSGT01050000244827.D.b.b.a.d #10	ENSGT01030000234610.b.a.b.b.f #20
Goldfish	MODERN SPECIES	4	znf511 (ENSCARG00000015914)	adam8a (ENSCARG00000015848)	spef1 (ENSCARG00000015833)	erlin1 (ENSCARG00000015718)	ENSCARG00000015678	slka (ENSCARG00000014935) #16	zgc:153981 (ENSCARG00000014889)	dusp13a (ENSCARG00000014880)	ENSCARG00000014874	KAT6B (ENSCARG00000014842)	plaua (ENSCARG00000014833)	chuk (ENSCARG00000012537)	ENSCARG00000012472	ENSCARG00000012462	itprip (ENSCARG00000012458) #10	CALHM3 (ENSCARG00000012451) #20	CALHM1 (ENSCARG00000012444) #21	ENSCARG00000012424	bag3 (ENSCARG00000012416)	tial1 (ENSCARG00000012293)	inpp5f (ENSCARG00000012088)	mcmbp (ENSCARG00000011957)	sec23ip (ENSCARG00000011942)	csgalnact2 (ENSCARG00000011932)	rab4a (ENSCARG00000011907)	ccsapb (ENSCARG00000011901)	acta1b (ENSCARG00000011887)	ABCB10 (ENSCARG00000011367)	galnt2 (ENSCARG00000010699)	pgbd5 (ENSCARG00000010662)	cog2 (ENSCARG00000010383)
Cyprininae_a	ANCESTRAL SPECIES	574									ENSGT00940000158184.o	ENSGT01030000234543.D.m.a	ENSGT00940000164426.d.a	ENSGT00950000182937.A.a.o.c	ENSGT00940000155351.a #12	ENSGT00940000163896.j.a	ENSGT01050000244827.D.b.b.a.d #10	ENSGT01030000234610.b.a.b.b.f #20	ENSGT01030000234610.b.a.b.a.n.a #21	ENSGT01030000234610.b.a.a.f.b #22	ENSGT01030000234610.b.a.a.e.a #22
Common carp reference	MODERN SPECIES	18	erlin1 (ENSCCRG00000046675)	ENSCCRG00000013218	ENSCCRG00000072378	ENSCCRG00000010032 #16	ENSCCRG00000010300	ENSCCRG00000010306	KAT6B (ENSCCRG00000073616)	adka (ENSCCRG00000042385)	ap3m1 (ENSCCRG00000020600)	vcla (ENSCCRG00000005235)	plaua (ENSCCRG00000016933)	chuk (ENSCCRG00000008205)	ENSCCRG00000009627	ENSCCRG00000072289	itprip (ENSCCRG00000058077) #10	CALHM3 (ENSCCRG00000009658) #20	ENSCCRG00000011579 #21	CALHM2 (ENSCCRG00000011582) #22	calhm2.1 (ENSCCRG00000009665) #22	ENSCCRG00000056336	atoh7 (ENSCCRG00000065383)	ENSCCRG00000009672	ENSCCRG00000009677	tial1 (ENSCCRG00000000329)	bag3 (ENSCCRG00000001081)	inpp5f (ENSCCRG00000059458)	mcmbp (ENSCCRG00000070447)	sec23ip (ENSCCRG00000047654)	csgalnact2 (ENSCCRG00000047900)	ret (ENSCCRG00000047916)	pcbd1 (ENSCCRG00000054537)
Golden-line barbel	MODERN SPECIES	679									ap3m1 (ENSSGRG00000024984)	vcla (ENSSGRG00000025185)	plaua (ENSSGRG00000026457)	chuk (ENSSGRG00000026460)	gsto1 (ENSSGRG00000027626) #12	ENSSGRG00000027627	itprip (ENSSGRG00000027628) #10	CALHM3 (ENSSGRG00000027629) #20	CALHM2 (ENSSGRG00000027630) #22	CALHM1 (ENSSGRG00000027631) #21	calhm2.1 (ENSSGRG00000027632) #22	ENSSGRG00000027633	ENSSGRG00000027635	ENSSGRG00000027636	PKD2L1 (ENSSGRG00000027637)	TIAL1 (ENSSGRG00000027638)	bag3 (ENSSGRG00000027959)	inpp5f (ENSSGRG00000027963)	mcmbp (ENSSGRG00000027994)	sec23ip (ENSSGRG00000028472)	csgalnact2 (ENSSGRG00000028876)	ret (ENSSGRG00000028886)	ENSSGRG00000029140
Zebrafish	MODERN SPECIES	4	slka (ENSDARG00000061525) #16	si:ch211-223p8.8 (ENSDARG00000092650)	ENSDARG00000111496	zgc:153981 (ENSDARG00000069529)	dusp13a (ENSDARG00000061498)	ENSDARG00000094665	KAT6B (ENSDARG00000055429)	adka (ENSDARG00000039429)	ap3m1 (ENSDARG00000029928)	vcla (ENSDARG00000044968)	chuk (ENSDARG00000011662)	plaua (ENSDARG00000075265)	gsto1 (ENSDARG00000022183) #12	gsto2 (ENSDARG00000033285) #12	itprip (ENSDARG00000015576) #10	CALHM3 (ENSDARG00000079602) #20	CALHM1 (ENSDARG00000077021) #21	CALHM2 (ENSDARG00000074179) #22	calhm2.1 (ENSDARG00000039482) #22	ENSDARG00000039483	atoh7 (ENSDARG00000069552)	PKD2L1 (ENSDARG00000022503)	tial1 (ENSDARG00000009525)	bag3 (ENSDARG00000039486)	inpp5f (ENSDARG00000061437)	mcmbp (ENSDARG00000055314)	sec23ip (ENSDARG00000061413)	csgalnact2 (ENSDARG00000061400)	ret (ENSDARG00000055305)	si:dkey-192p21.6 (ENSDARG00000091212)	pcbd1 (ENSDARG00000031981)
Osteoglossiformes	ANCESTRAL SPECIES	94									ENSGT00940000156184.a.l #16	ENSGT00940000168136	ENSGT00390000018550 #14	ENSGT00530000064714 #13	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT01050000244827.D.b.b.a #10	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00940000166025.b	ENSGT00940000166025.a	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.c #27	ENSGT00940000163289.b.a.a	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.a.b #34
Asian bonytongue	MODERN SPECIES	19									ENSSFOG00015013008 ##7	ENSSFOG00015012935 ##19	SLK (ENSSFOG00015012846) #16	SFR1 (ENSSFOG00015028199) #14	CFAP43 (ENSSFOG00015012763) #13	ENSSFOG00015012731	itprip (ENSSFOG00015029908) #10	CALHM3 (ENSSFOG00015012698) #20	CALHM1 (ENSSFOG00015012690) #21	calhm2.1 (ENSSFOG00015025842) #22	nt5c2a (ENSSFOG00015012548)	fbxw4 (ENSSFOG00015012488)	fgf8a (ENSSFOG00015012408)	slc2a15a (ENSSFOG00015012364)	TLX1 (ENSSFOG00015026057)	SDHAF4 (ENSSFOG00015030247)	b3gat2 (ENSSFOG00015028654)	OGFRL1 (ENSSFOG00015024337)	asrgl1 (ENSSFOG00015012313)	ENSSFOG00015012291	ENSSFOG00015003071	ddx43 (ENSSFOG00015012193)	CGAS (ENSSFOG00015012161) ##10
P. kingsleyae	MODERN SPECIES	11	ABRAXAS2 (ENSPKIG00000001088)	ZRANB1 (ENSPKIG00000001121)	CTBP2 (ENSPKIG00000001178)	EDRF1 (ENSPKIG00000001321)	tex36 (ENSPKIG00000001448)	ADAM12 (ENSPKIG00000001470)	ENSPKIG00000001535	INSYN2A (ENSPKIG00000001600)	SLK (ENSPKIG00000001638) #16	ENSPKIG00000001737	sfr1 (ENSPKIG00000001887) #14	ENSPKIG00000001908 #13	ENSPKIG00000001925	gsto2 (ENSPKIG00000001946) #12	itprip (ENSPKIG00000001965) #10	CALHM3 (ENSPKIG00000001981) #20	CALHM1 (ENSPKIG00000002001) #21	calhm2.1 (ENSPKIG00000002024) #22	ENSPKIG00000002038	taf5 (ENSPKIG00000002076) #25	INA (ENSPKIG00000002123) #27	nt5c2a (ENSPKIG00000002181)	cnnm2a (ENSPKIG00000002307) #30	WBP1L (ENSPKIG00000002346) #34	fbxw4 (ENSPKIG00000002375)	fgf8a (ENSPKIG00000002430)	slc2a15a (ENSPKIG00000002478)	ENSPKIG00000002553	tlx1 (ENSPKIG00000002563)	smap1 (ENSPKIG00000002589)	b3gat2 (ENSPKIG00000002632)
Spotted gar	MODERN SPECIES	671	ENSLOCG00000012011	ENSLOCG00000018252	ENSLOCG00000011997 ##7	ENSLOCG00000011988 ##7	cfap58 (ENSLOCG00000011978) #9	neurl1aa (ENSLOCG00000011969) #19	SH3PXD2A (ENSLOCG00000011958) #18	stn1 (ENSLOCG00000011951) #17	slka (ENSLOCG00000011943) #16	ENSLOCG00000011911	ENSLOCG00000011901	sfr1 (ENSLOCG00000011891) #14	CFAP43 (ENSLOCG00000011880) #13	gsto2 (ENSLOCG00000011872) #12	itprip (ENSLOCG00000011865) #10	CALHM3 (ENSLOCG00000011856) #20	CALHM1 (ENSLOCG00000011849) #21	calhm2.1 (ENSLOCG00000011840) #22	zgc:175214 (ENSLOCG00000011833)	pdcd11 (ENSLOCG00000011818) #23	atp5md (ENSLOCG00000011809)	taf5 (ENSLOCG00000011799) #25	pcgf6 (ENSLOCG00000011792) #26	inab (ENSLOCG00000011782) #27	nt5c2b (ENSLOCG00000011770)	cnnm2a (ENSLOCG00000011756) #30	as3mt (ENSLOCG00000011748) #31	borcs7 (ENSLOCG00000011739) #32	cyp17a1 (ENSLOCG00000011729) #33	wbp1la (ENSLOCG00000011721) #34	poll (ENSLOCG00000011706)
Reedfish	MODERN SPECIES	10	ENSECRG00000006939	ENSECRG00000006946	ENSECRG00000006958	ENSECRG00000007017 ##7	ENSECRG00000007079	cfap58 (ENSECRG00000007087) #9	neurl1aa (ENSECRG00000007103) #19	SH3PXD2A (ENSECRG00000007116) #18	stn1 (ENSECRG00000007127) #17	slka (ENSECRG00000007144) #16	ENSECRG00000007182	sfr1 (ENSECRG00000007226) #14	ENSECRG00000007238 #13	gsto2 (ENSECRG00000007253) #12	itprip (ENSECRG00000007263) #10	CALHM3 (ENSECRG00000007274) #20	CALHM1 (ENSECRG00000007283) #21	calhm2.1 (ENSECRG00000007287) #22	ENSECRG00000007296	ENSECRG00000007304	ENSECRG00000007314	ENSECRG00000007317	pxmp2 (ENSECRG00000007325)	zgc:175214 (ENSECRG00000007332)	inab (ENSECRG00000007342) #27	nt5c2b (ENSECRG00000007361)	ENSECRG00000007387 #30	cnnm2a (ENSECRG00000007397) #30	as3mt (ENSECRG00000007410) #31	borcs7 (ENSECRG00000007423) #32	cyp17a1 (ENSECRG00000007434) #33
Sarcopterygii	ANCESTRAL SPECIES	124																ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Tetrapoda	ANCESTRAL SPECIES	39							ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Amniota	ANCESTRAL SPECIES	10	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Sauria	ANCESTRAL SPECIES	8	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Laterata	ANCESTRAL SPECIES		ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Argentine black and white tegu	MODERN SPECIES	48	ADD3 (ENSSMRG00000009071)	XPNPEP1 (ENSSMRG00000009070)	ENSSMRG00000009049	ENSSMRG00000008972	SORCS1 (ENSSMRG00000007831) #7	ENSSMRG00000007793 #8	CFAP58 (ENSSMRG00000007769) #9	GSTO1 (ENSSMRG00000007742) #12	CFAP43 (ENSSMRG00000007729) #13	SFR1 (ENSSMRG00000007728) #14	COL17A1 (ENSSMRG00000007725) #15	SLK (ENSSMRG00000007721) #16	STN1 (ENSSMRG00000007719) #17	SH3PXD2A (ENSSMRG00000007713) #18	NEURL1 (ENSSMRG00000007702) #19	CALHM3 (ENSSMRG00000007700) #20	CALHM1 (ENSSMRG00000007696) #21	CALHM2 (ENSSMRG00000007689) #22	PDCD11 (ENSSMRG00000007373) #23	ENSSMRG00000007366	TAF5 (ENSSMRG00000007365) #25	PCGF6 (ENSSMRG00000007357) #26	INA (ENSSMRG00000007346) #27	ENSSMRG00000007327	CNNM2 (ENSSMRG00000007300) #30	AS3MT (ENSSMRG00000007298) #31	CYP17A1 (ENSSMRG00000007206) #33	BORCS7 (ENSSMRG00000007198) #32	WBP1L (ENSSMRG00000007196) #34	SFXN2 (ENSSMRG00000007184) #35	ARL3 (ENSSMRG00000007182) #36
Common wall lizard	MODERN SPECIES	13	SORCS3 (ENSPMRG00000003596) #8	ENSPMRG00000003609	CFAP58 (ENSPMRG00000003628) #9	ITPRIP (ENSPMRG00000003681) #10	GSTO1 (ENSPMRG00000003685) #12	CFAP43 (ENSPMRG00000003694) #13	SFR1 (ENSPMRG00000003720) #14	ENSPMRG00000003723	ENSPMRG00000003725	ENSPMRG00000003729	SLK (ENSPMRG00000003737) #16	STN1 (ENSPMRG00000003752) #17	SH3PXD2A (ENSPMRG00000003762) #18	ENSPMRG00000003770 #19	NEURL1 (ENSPMRG00000003774) #19	CALHM3 (ENSPMRG00000003782) #20	CALHM1 (ENSPMRG00000003784) #21	CALHM2 (ENSPMRG00000003787) #22	PDCD11 (ENSPMRG00000003794) #23	ENSPMRG00000003807	TAF5 (ENSPMRG00000003816) #25	PCGF6 (ENSPMRG00000003838) #26	INA (ENSPMRG00000003841) #27	ENSPMRG00000003857	CNNM2 (ENSPMRG00000003889) #30	AS3MT (ENSPMRG00000003894) #31	CYP17A1 (ENSPMRG00000003910) #33	WBP1L (ENSPMRG00000003937) #34	SFXN2 (ENSPMRG00000003945) #35	ARL3 (ENSPMRG00000003951) #36	TRIM8 (ENSPMRG00000003954) #37
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00940000155588.b.u #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.p #12	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00940000155588.b.u #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Elapidae_a	ANCESTRAL SPECIES		ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.p #12	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Acanthophiinae	ANCESTRAL SPECIES	1	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.o #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT01030000236482	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b.v #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Eastern brown snake	MODERN SPECIES	25	XPNPEP1 (ENSPTXG00000002996)	SORCS1 (ENSPTXG00000002991) #7	SORCS3 (ENSPTXG00000001273) #8	ENSPTXG00000001203	ENSPTXG00000001198 #9	ITPRIP (ENSPTXG00000001196) #10	GSTO1 (ENSPTXG00000001192) #12	ENSPTXG00000001183 #13	ENSPTXG00000001172 #13	SFR1 (ENSPTXG00000001166) #14	ENSPTXG00000001161	SLK (ENSPTXG00000001147) #16	STN1 (ENSPTXG00000001053) #17	SH3PXD2A (ENSPTXG00000001038) #18	NEURL1 (ENSPTXG00000001034) #19	CALHM3 (ENSPTXG00000001030) #20	CALHM1 (ENSPTXG00000001028) #21	CALHM2 (ENSPTXG00000001025) #22	PDCD11 (ENSPTXG00000000924) #23	ENSPTXG00000000883	TAF5 (ENSPTXG00000000881) #25	PCGF6 (ENSPTXG00000000878) #26	INA (ENSPTXG00000000859) #27	ENSPTXG00000000856	CNNM2 (ENSPTXG00000000855) #30	BORCS7 (ENSPTXG00000000854) #32	CYP17A1 (ENSPTXG00000000602) #33	WBP1L (ENSPTXG00000000567) #34	SFXN2 (ENSPTXG00000000558) #35	ARL3 (ENSPTXG00000000545) #36	TRIM8 (ENSPTXG00000000536) #37
Mainland tiger snake	MODERN SPECIES		MXI1 (ENSNSUG00000003880)	ADD3 (ENSNSUG00000003902)	XPNPEP1 (ENSNSUG00000004851)	SORCS1 (ENSNSUG00000005013) #7	SORCS3 (ENSNSUG00000005046) #8	ENSNSUG00000005077	ITPRIP (ENSNSUG00000005078) #10	GSTO1 (ENSNSUG00000005079) #12	ENSNSUG00000005146 #13	SFR1 (ENSNSUG00000005147) #14	ENSNSUG00000005149	SLK (ENSNSUG00000005155) #16	STN1 (ENSNSUG00000005927) #17	SH3PXD2A (ENSNSUG00000006039) #18	NEURL1 (ENSNSUG00000006040) #19	CALHM3 (ENSNSUG00000006054) #20	CALHM1 (ENSNSUG00000006055) #21	CALHM2 (ENSNSUG00000006056) #22	PDCD11 (ENSNSUG00000006057) #23	ENSNSUG00000006296	TAF5 (ENSNSUG00000006297) #25	ENSNSUG00000006298 #26	ENSNSUG00000006299 #26	INA (ENSNSUG00000006300) #27	ENSNSUG00000006332	CNNM2 (ENSNSUG00000006339) #30	BORCS7 (ENSNSUG00000006370) #32	CYP17A1 (ENSNSUG00000006374) #33	WBP1L (ENSNSUG00000006455) #34	SFXN2 (ENSNSUG00000006456) #35	ARL3 (ENSNSUG00000006546) #36
Blue-lipped sea krait	MODERN SPECIES	5892																CALHM3 (ENSLLTG00000006528) #20	CALHM1 (ENSLLTG00000006541) #21
Indian cobra	MODERN SPECIES	3	ADD3 (ENSNNAG00000010045)	XPNPEP1 (ENSNNAG00000010320)	SORCS1 (ENSNNAG00000011948) #7	SORCS3 (ENSNNAG00000013056) #8	CFAP58 (ENSNNAG00000013309) #9	ITPRIP (ENSNNAG00000013441) #10	ENSNNAG00000013459 #12	ENSNNAG00000013626 #12	CFAP43 (ENSNNAG00000013647) #13	SFR1 (ENSNNAG00000013731) #14	ENSNNAG00000013739	SLK (ENSNNAG00000013794) #16	STN1 (ENSNNAG00000013991) #17	SH3PXD2A (ENSNNAG00000014011) #18	NEURL1 (ENSNNAG00000014090) #19	CALHM3 (ENSNNAG00000014121) #20	CALHM1 (ENSNNAG00000014135) #21	CALHM2 (ENSNNAG00000014158) #22	PDCD11 (ENSNNAG00000014210) #23	ENSNNAG00000014447	TAF5 (ENSNNAG00000014456) #25	PCGF6 (ENSNNAG00000014483) #26	INA (ENSNNAG00000014506) #27	ENSNNAG00000014527	CNNM2 (ENSNNAG00000014688) #30	BORCS7 (ENSNNAG00000014735) #32	ENSNNAG00000014755 #33	ENSNNAG00000014782 #33	WBP1L (ENSNNAG00000014802) #34	SFXN2 (ENSNNAG00000014833) #35	ARL3 (ENSNNAG00000014865) #36
Lizard	MODERN SPECIES	2	ENSACAG00000039231	ENSACAG00000045516	SORCS1 (ENSACAG00000006446) #7	ENSACAG00000037409	SORCS3 (ENSACAG00000005234) #8	CFAP58 (ENSACAG00000005225) #9	ITPRIP (ENSACAG00000005224) #10	ENSACAG00000005210 #12	CFAP43 (ENSACAG00000005165) #13	SFR1 (ENSACAG00000037852) #14	ENSACAG00000005136	SLK (ENSACAG00000004988) #16	STN1 (ENSACAG00000004954) #17	SH3PXD2A (ENSACAG00000004932) #18	NEURL1 (ENSACAG00000004920) #19	CALHM3 (ENSACAG00000004919) #20	CALHM1 (ENSACAG00000008401) #21	CALHM2 (ENSACAG00000004916) #22	PDCD11 (ENSACAG00000004796) #23	ENSACAG00000044621	TAF5 (ENSACAG00000004756) #25	PCGF6 (ENSACAG00000029126) #26	ENSACAG00000004712 #27	ENSACAG00000004601	ENSACAG00000042108	CNNM2 (ENSACAG00000004555) #30	AS3MT (ENSACAG00000029427) #31	BORCS7 (ENSACAG00000042978) #32	ENSACAG00000043026 #33	ENSACAG00000004350 #33	WBP1L (ENSACAG00000040095) #34
tuatara	MODERN SPECIES	1056														SH3PXD2A (ENSSPUG00000010795) #18	NEURL1 (ENSSPUG00000010823) #19	CALHM3 (ENSSPUG00000010832) #20	CALHM1 (ENSSPUG00000010841) #21	CALHM2 (ENSSPUG00000010854) #22	ENSSPUG00000010908	PCGF6 (ENSSPUG00000010948) #26	INA (ENSSPUG00000010955) #27	ENSSPUG00000010969	CNNM2 (ENSSPUG00000011002) #30	AS3MT (ENSSPUG00000011056) #31	BORCS7 (ENSSPUG00000011069) #32	CYP17A1 (ENSSPUG00000011092) #33	WBP1L (ENSSPUG00000011131) #34	SFXN2 (ENSSPUG00000011143) #35	ARL3 (ENSSPUG00000011154) #36	TRIM8 (ENSSPUG00000011167) #37	SUFU (ENSSPUG00000011181)
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Aves	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Neognathae	ANCESTRAL SPECIES	7	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Passeriformes	ANCESTRAL SPECIES	10	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Great tit	MODERN SPECIES	26	MXI1 (ENSPMJG00000005159)	ADD3 (ENSPMJG00000005151)	XPNPEP1 (ENSPMJG00000005139)	ENSPMJG00000005133 #7	SORCS3 (ENSPMJG00000004998) #8	CFAP58 (ENSPMJG00000004959) #9	ITPRIP (ENSPMJG00000004954) #10	GSTO1 (ENSPMJG00000004953) #12	CFAP43 (ENSPMJG00000004936) #13	SFR1 (ENSPMJG00000004933) #14	COL17A1 (ENSPMJG00000004922) #15	SLK (ENSPMJG00000004918) #16	STN1 (ENSPMJG00000004908) #17	SH3PXD2A (ENSPMJG00000004903) #18	NEURL1 (ENSPMJG00000004900) #19	CALHM3 (ENSPMJG00000004896) #20	CALHM1 (ENSPMJG00000004895) #21	CALHM2 (ENSPMJG00000004894) #22	PDCD11 (ENSPMJG00000004885) #23	ENSPMJG00000004884	TAF5 (ENSPMJG00000004873) #25	PCGF6 (ENSPMJG00000004871) #26	ENSPMJG00000004870 #27	ENSPMJG00000004864	CNNM2 (ENSPMJG00000004847) #30	AS3MT (ENSPMJG00000004824) #31	BORCS7 (ENSPMJG00000004813) #32	CYP17A1 (ENSPMJG00000004801) #33	WBP1L (ENSPMJG00000004795) #34	SFXN2 (ENSPMJG00000004788) #35	ARL3 (ENSPMJG00000004786) #36
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Flycatcher	MODERN SPECIES	25	XPNPEP1 (ENSFALG00000002322)	ENSFALG00000002325 #7	ENSFALG00000028861 #7	ENSFALG00000024289	ENSFALG00000027115 #8	CFAP58 (ENSFALG00000008836) #9	ITPRIP (ENSFALG00000015177) #10	GSTO1 (ENSFALG00000023298) #12	CFAP43 (ENSFALG00000008825) #13	SFR1 (ENSFALG00000008822) #14	COL17A1 (ENSFALG00000008808) #15	SLK (ENSFALG00000008795) #16	STN1 (ENSFALG00000008791) #17	SH3PXD2A (ENSFALG00000008788) #18	NEURL1 (ENSFALG00000008785) #19	CALHM3 (ENSFALG00000008782) #20	CALHM1 (ENSFALG00000008781) #21	CALHM2 (ENSFALG00000008779) #22	PDCD11 (ENSFALG00000008775) #23	ENSFALG00000008772	TAF5 (ENSFALG00000008762) #25	PCGF6 (ENSFALG00000008758) #26	ENSFALG00000008745	CNNM2 (ENSFALG00000027005) #30	AS3MT (ENSFALG00000008732) #31	BORCS7 (ENSFALG00000027772) #32	CYP17A1 (ENSFALG00000008728) #33	WBP1L (ENSFALG00000023398) #34	SFXN2 (ENSFALG00000008726) #35	ARL3 (ENSFALG00000023787) #36	TRIM8 (ENSFALG00000008714) #37
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a.b #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Zebra finch	MODERN SPECIES	28	ADD3 (ENSTGUG00000010566)	XPNPEP1 (ENSTGUG00000010544)	ENSTGUG00000019641	SORCS1 (ENSTGUG00000010498) #7	SORCS3 (ENSTGUG00000010448) #8	CFAP58 (ENSTGUG00000010439) #9	ITPRIP (ENSTGUG00000010438) #10	GSTO1 (ENSTGUG00000010435) #12	CFAP43 (ENSTGUG00000010429) #13	SFR1 (ENSTGUG00000028915) #14	COL17A1 (ENSTGUG00000010406) #15	SLK (ENSTGUG00000010378) #16	STN1 (ENSTGUG00000010354) #17	SH3PXD2A (ENSTGUG00000010339) #18	NEURL1 (ENSTGUG00000010332) #19	CALHM3 (ENSTGUG00000010326) #20	CALHM1 (ENSTGUG00000010322) #21	CALHM2 (ENSTGUG00000010317) #22	ENSTGUG00000020703	TAF5 (ENSTGUG00000010278) #25	PDCD11 (ENSTGUG00000010303) #23	INA (ENSTGUG00000010268) #27	PCGF6 (ENSTGUG00000021064) #26	ENSTGUG00000010251	CNNM2 (ENSTGUG00000010244) #30	AS3MT (ENSTGUG00000010233) #31	BORCS7 (ENSTGUG00000010228) #32	CYP17A1 (ENSTGUG00000010219) #33	WBP1L (ENSTGUG00000019651) #34	SFXN2 (ENSTGUG00000010190) #35	ARL3 (ENSTGUG00000019757) #36
Common canary	MODERN SPECIES	7	MXI1 (ENSSCAG00000015793)	ADD3 (ENSSCAG00000015803)	XPNPEP1 (ENSSCAG00000015812)	SORCS1 (ENSSCAG00000015963) #7	SORCS3 (ENSSCAG00000016194) #8	ENSSCAG00000016213	ITPRIP (ENSSCAG00000016214) #10	GSTO1 (ENSSCAG00000016216) #12	ENSSCAG00000016218 #13	SFR1 (ENSSCAG00000016224) #14	ENSSCAG00000016228	SLK (ENSSCAG00000016280) #16	STN1 (ENSSCAG00000016371) #17	SH3PXD2A (ENSSCAG00000016378) #18	NEURL1 (ENSSCAG00000016390) #19	CALHM3 (ENSSCAG00000016394) #20	CALHM1 (ENSSCAG00000016401) #21	CALHM2 (ENSSCAG00000016403) #22	PDCD11 (ENSSCAG00000016425) #23	ENSSCAG00000016437	TAF5 (ENSSCAG00000016438) #25	PCGF6 (ENSSCAG00000016440) #26	ENSSCAG00000016444	CNNM2 (ENSSCAG00000016453) #30	AS3MT (ENSSCAG00000016464) #31	BORCS7 (ENSSCAG00000016467) #32	CYP17A1 (ENSSCAG00000016469) #33	WBP1L (ENSSCAG00000016475) #34	SFXN2 (ENSSCAG00000016485) #35	ARL3 (ENSSCAG00000016489) #36	TRIM8 (ENSSCAG00000016492) #37
Medium ground finch	MODERN SPECIES	3	MXI1 (ENSGFOG00000000018)	ADD3 (ENSGFOG00000000019)	XPNPEP1 (ENSGFOG00000000025)	SORCS1 (ENSGFOG00000000098) #7	SORCS3 (ENSGFOG00000000897) #8	CFAP58 (ENSGFOG00000002012) #9	ITPRIP (ENSGFOG00000002026) #10	GSTO1 (ENSGFOG00000002031) #12	CFAP43 (ENSGFOG00000002038) #13	SFR1 (ENSGFOG00000002070) #14	COL17A1 (ENSGFOG00000002087) #15	SLK (ENSGFOG00000002125) #16	STN1 (ENSGFOG00000002147) #17	SH3PXD2A (ENSGFOG00000002444) #18	NEURL1 (ENSGFOG00000002459) #19	CALHM3 (ENSGFOG00000002487) #20	CALHM1 (ENSGFOG00000002507) #21	CALHM2 (ENSGFOG00000002524) #22	PDCD11 (ENSGFOG00000002545) #23	ENSGFOG00000002587	TAF5 (ENSGFOG00000002614) #25	PCGF6 (ENSGFOG00000002773) #26	ENSGFOG00000002787 #27	ENSGFOG00000002800	CNNM2 (ENSGFOG00000002873) #30	AS3MT (ENSGFOG00000003051) #31	BORCS7 (ENSGFOG00000003091) #32	CYP17A1 (ENSGFOG00000003105) #33	WBP1L (ENSGFOG00000003125) #34	SFXN2 (ENSGFOG00000003144) #35	ARL3 (ENSGFOG00000003169) #36
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00940000177515	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Golden eagle	MODERN SPECIES	2	XPNPEP1 (ENSACCG00020006768)	SORCS1 (ENSACCG00020007028) #7	SORCS3 (ENSACCG00020007845) #8	ENSACCG00020008431	ENSACCG00020008439 #9	ITPRIP (ENSACCG00020008449) #10	GSTO1 (ENSACCG00020008459) #12	ENSACCG00020008473 #13	ENSACCG00020008494 #13	SFR1 (ENSACCG00020008505) #14	COL17A1 (ENSACCG00020008541) #15	SLK (ENSACCG00020008584) #16	STN1 (ENSACCG00020008611) #17	SH3PXD2A (ENSACCG00020008630) #18	NEURL1 (ENSACCG00020008657) #19	CALHM3 (ENSACCG00020008676) #20	CALHM1 (ENSACCG00020008691) #21	PDCD11 (ENSACCG00020008722) #23	CALHM2 (ENSACCG00020008777) #22	TAF5 (ENSACCG00020008799) #25	PCGF6 (ENSACCG00020008830) #26	INA (ENSACCG00020008852) #27	ENSACCG00020008884	CNNM2 (ENSACCG00020008928) #30	AS3MT (ENSACCG00020008961) #31	BORCS7 (ENSACCG00020008980) #32	CYP17A1 (ENSACCG00020009021) #33	WBP1L (ENSACCG00020009066) #34	SFXN2 (ENSACCG00020009091) #35	ARL3 (ENSACCG00020009119) #36	TRIM8 (ENSACCG00020009134) #37
Kakapo	MODERN SPECIES	22	MXI1 (ENSSHBG00005007340)	ADD3 (ENSSHBG00005007229)	XPNPEP1 (ENSSHBG00005007133)	SORCS1 (ENSSHBG00005004648) #7	SORCS3 (ENSSHBG00005004232) #8	CFAP58 (ENSSHBG00005004147) #9	ITPRIP (ENSSHBG00005004137) #10	GSTO1 (ENSSHBG00005004123) #12	ENSSHBG00005004116 #13	ENSSHBG00005004081 #13	SFR1 (ENSSHBG00005004060) #14	SLK (ENSSHBG00005004050) #16	STN1 (ENSSHBG00005004031) #17	SH3PXD2A (ENSSHBG00005004014) #18	NEURL1 (ENSSHBG00005003998) #19	CALHM3 (ENSSHBG00005003981) #20	CALHM1 (ENSSHBG00005003959) #21	CALHM2 (ENSSHBG00005003944) #22	PDCD11 (ENSSHBG00005003710) #23	ENSSHBG00005003514	TAF5 (ENSSHBG00005003500) #25	PCGF6 (ENSSHBG00005003486) #26	INA (ENSSHBG00005003473) #27	ENSSHBG00005003426	CNNM2 (ENSSHBG00005003379) #30	AS3MT (ENSSHBG00005003341) #31	BORCS7 (ENSSHBG00005003312) #32	CYP17A1 (ENSSHBG00005003271) #33	WBP1L (ENSSHBG00005003246) #34	SFXN2 (ENSSHBG00005003217) #35	ARL3 (ENSSHBG00005003201) #36
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Anatidae	ANCESTRAL SPECIES	4	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00880000138014.b.i	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Duck	MODERN SPECIES	24	ENSAPLG00000025811	ADD3 (ENSAPLG00000004481)	XPNPEP1 (ENSAPLG00000013402)	SORCS1 (ENSAPLG00000004914) #7	ENSAPLG00000005363	ENSAPLG00000017158 #8	CFAP58 (ENSAPLG00000005743) #9	ITPRIP (ENSAPLG00000005949) #10	CFAP43 (ENSAPLG00000006084) #13	SFR1 (ENSAPLG00000016782) #14	COL17A1 (ENSAPLG00000006175) #15	SLK (ENSAPLG00000006212) #16	STN1 (ENSAPLG00000006661) #17	SH3PXD2A (ENSAPLG00000006691) #18	NEURL1 (ENSAPLG00000006704) #19	CALHM3 (ENSAPLG00000015563) #20	CALHM1 (ENSAPLG00000010081) #21	CALHM2 (ENSAPLG00000019475) #22	PDCD11 (ENSAPLG00000010301) #23	ENSAPLG00000019499	TAF5 (ENSAPLG00000011406) #25	PCGF6 (ENSAPLG00000026176) #26	ENSAPLG00000027671 #27	ENSAPLG00000018565 #27	ENSAPLG00000023786 #29	CNNM2 (ENSAPLG00000013829) #30	BORCS7 (ENSAPLG00000004416) #32	CYP17A1 (ENSAPLG00000012297) #33	WBP1L (ENSAPLG00000012879) #34	SFXN2 (ENSAPLG00000030360) #35	ARL3 (ENSAPLG00000016017) #36
Pink-footed goose	MODERN SPECIES	11	ADD3 (ENSABRG00000006446)	XPNPEP1 (ENSABRG00000006458)	SORCS1 (ENSABRG00000006509) #7	ENSABRG00000006569	SORCS3 (ENSABRG00000006638) #8	CFAP58 (ENSABRG00000007070) #9	ITPRIP (ENSABRG00000007102) #10	GSTO1 (ENSABRG00000007104) #12	CFAP43 (ENSABRG00000007106) #13	SFR1 (ENSABRG00000007118) #14	COL17A1 (ENSABRG00000007126) #15	SLK (ENSABRG00000007148) #16	STN1 (ENSABRG00000007161) #17	SH3PXD2A (ENSABRG00000007174) #18	NEURL1 (ENSABRG00000007194) #19	CALHM3 (ENSABRG00000007209) #20	CALHM1 (ENSABRG00000007212) #21	CALHM2 (ENSABRG00000007215) #22	PDCD11 (ENSABRG00000007218) #23	ENSABRG00000007233	TAF5 (ENSABRG00000007239) #25	PCGF6 (ENSABRG00000007251) #26	INA (ENSABRG00000007311) #27	ENSABRG00000007316	CNNM2 (ENSABRG00000007326) #30	AS3MT (ENSABRG00000007335) #31	BORCS7 (ENSABRG00000007354) #32	CYP17A1 (ENSABRG00000007357) #33	WBP1L (ENSABRG00000007376) #34	SFXN2 (ENSABRG00000007382) #35	ARL3 (ENSABRG00000007391) #36
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Japanese quail	MODERN SPECIES	24	SMNDC1 (ENSCJPG00005020028)	MXI1 (ENSCJPG00005020027)	ADD3 (ENSCJPG00005020026)	XPNPEP1 (ENSCJPG00005020024)	SORCS1 (ENSCJPG00005020021) #7	SORCS3 (ENSCJPG00005020015) #8	CFAP58 (ENSCJPG00005020013) #9	ITPRIP (ENSCJPG00005020012) #10	GSTO1 (ENSCJPG00005020011) #12	CFAP43 (ENSCJPG00005020010) #13	SFR1 (ENSCJPG00005020009) #14	SLK (ENSCJPG00005020006) #16	STN1 (ENSCJPG00005020005) #17	SH3PXD2A (ENSCJPG00005020004) #18	NEURL1 (ENSCJPG00005020003) #19	CALHM3 (ENSCJPG00005020002) #20	CALHM1 (ENSCJPG00005020001) #21	CALHM2 (ENSCJPG00005020000) #22	PDCD11 (ENSCJPG00005019999) #23	ENSCJPG00005019998	TAF5 (ENSCJPG00005019997) #25	PCGF6 (ENSCJPG00005019996) #26	INA (ENSCJPG00005019995) #27	ENSCJPG00005019994	CNNM2 (ENSCJPG00005019993) #30	AS3MT (ENSCJPG00005019992) #31	BORCS7 (ENSCJPG00005019991) #32	CYP17A1 (ENSCJPG00005019990) #33	WBP1L (ENSCJPG00005019989) #34	SFXN2 (ENSCJPG00005019988) #35	ARL3 (ENSCJPG00005019987) #36
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Chicken	MODERN SPECIES	35	MXI1 (ENSGALG00010017796)	ADD3 (ENSGALG00010020211)	XPNPEP1 (ENSGALG00010020183)	SORCS1 (ENSGALG00010020170) #7	SORCS3 (ENSGALG00010019237) #8	CFAP58 (ENSGALG00010021455) #9	ITPRIP (ENSGALG00010021439) #10	GSTO2 (ENSGALG00010021390) #12	CFAP43 (ENSGALG00010021352) #13	SFR1 (ENSGALG00010021342) #14	COL17A1 (ENSGALG00010021287) #15	SLK (ENSGALG00010021240) #16	STN1 (ENSGALG00010021231) #17	SH3PXD2A (ENSGALG00010021215) #18	NEURL1 (ENSGALG00010021166) #19	CALHM3 (ENSGALG00010021132) #20	CALHM1 (ENSGALG00010021128) #21	CALHM2 (ENSGALG00010021124) #22	PDCD11 (ENSGALG00010021120) #23	USMG5 (ENSGALG00010021118)	TAF5 (ENSGALG00010021112) #25	PCGF6 (ENSGALG00010021108) #26	INA (ENSGALG00010021104) #27	NT5C2 (ENSGALG00010021095)	CNNM2 (ENSGALG00010021065) #30	AS3MT (ENSGALG00010018229) #31	BORCS7 (ENSGALG00010018199) #32	CYP17A1 (ENSGALG00010018183) #33	WBP1L (ENSGALG00010018831) #34	SFXN2 (ENSGALG00010018701) #35	ARL3 (ENSGALG00010018685) #36
Turkey	MODERN SPECIES	28	MXI1 (ENSMGAG00000010768)	ADD3 (ENSMGAG00000010717)	XPNPEP1 (ENSMGAG00000010742)	SORCS1 (ENSMGAG00000010697) #7	SORCS3 (ENSMGAG00000010686) #8	CFAP58 (ENSMGAG00000010672) #9	ITPRIP (ENSMGAG00000015336) #10	GSTO1 (ENSMGAG00000010660) #12	CFAP43 (ENSMGAG00000010597) #13	SFR1 (ENSMGAG00000010591) #14	COL17A1 (ENSMGAG00000010621) #15	SLK (ENSMGAG00000010557) #16	STN1 (ENSMGAG00000010550) #17	SH3PXD2A (ENSMGAG00000010540) #18	NEURL1 (ENSMGAG00000010527) #19	CALHM3 (ENSMGAG00000010524) #20	CALHM1 (ENSMGAG00000010522) #21	CALHM2 (ENSMGAG00000010516) #22	PDCD11 (ENSMGAG00000010482) #23	ENSMGAG00000022024	TAF5 (ENSMGAG00000010475) #25	PCGF6 (ENSMGAG00000019850) #26	ENSMGAG00000020111 #27	ENSMGAG00000010436	CNNM2 (ENSMGAG00000016951) #30	AS3MT (ENSMGAG00000010402) #31	CYP17A1 (ENSMGAG00000010364) #33	WBP1L (ENSMGAG00000010362) #34	SFXN2 (ENSMGAG00000010330) #35	ARL3 (ENSMGAG00000010320) #36	TRIM8 (ENSMGAG00000010315) #37
African ostrich	MODERN SPECIES	290														SH3PXD2A (ENSSCUG00000002067) #18	NEURL1 (ENSSCUG00000002062) #19	CALHM3 (ENSSCUG00000002056) #20	CALHM1 (ENSSCUG00000002050) #21	CALHM2 (ENSSCUG00000002045) #22	PDCD11 (ENSSCUG00000002038) #23	ENSSCUG00000002034	TAF5 (ENSSCUG00000002033) #25	PCGF6 (ENSSCUG00000002030) #26	ENSSCUG00000002023	CNNM2 (ENSSCUG00000002018) #30	AS3MT (ENSSCUG00000002015) #31	CYP17A1 (ENSSCUG00000001998) #33	WBP1L (ENSSCUG00000001977) #34	ARL3 (ENSSCUG00000001973) #36	TRIM8 (ENSSCUG00000001970) #37	SUFU (ENSSCUG00000001964)	ACTR1A (ENSSCUG00000001959)
Australian saltwater crocodile	MODERN SPECIES	68	ADD3 (ENSCPRG00005011399)	XPNPEP1 (ENSCPRG00005011419)	SORCS1 (ENSCPRG00005011482) #7	ENSCPRG00005011540	SORCS3 (ENSCPRG00005011631) #8	CFAP58 (ENSCPRG00005012375) #9	ITPRIP (ENSCPRG00005012384) #10	GSTO1 (ENSCPRG00005012391) #12	CFAP43 (ENSCPRG00005012405) #13	SFR1 (ENSCPRG00005012481) #14	ENSCPRG00005012489	SLK (ENSCPRG00005012498) #16	STN1 (ENSCPRG00005012508) #17	SH3PXD2A (ENSCPRG00005012523) #18	NEURL1 (ENSCPRG00005012544) #19	CALHM3 (ENSCPRG00005012558) #20	CALHM1 (ENSCPRG00005012562) #21	CALHM2 (ENSCPRG00005012571) #22	PDCD11 (ENSCPRG00005012589) #23	ENSCPRG00005012672	TAF5 (ENSCPRG00005012674) #25	PCGF6 (ENSCPRG00005012695) #26	ENSCPRG00005012714	CNNM2 (ENSCPRG00005012858) #30	ENSCPRG00005012869	AS3MT (ENSCPRG00005012880) #31	ENSCPRG00005012904	CYP17A1 (ENSCPRG00005012913) #33	WBP1L (ENSCPRG00005012923) #34	SFXN2 (ENSCPRG00005012928) #35	ARL3 (ENSCPRG00005012930) #36
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Goode s thornscrub tortoise	MODERN SPECIES	21	ADD3 (ENSGEVG00005013314)	XPNPEP1 (ENSGEVG00005013193)	SORCS1 (ENSGEVG00005011892) #7	SORCS3 (ENSGEVG00005011304) #8	ENSGEVG00005011234	CFAP58 (ENSGEVG00005011051) #9	ITPRIP (ENSGEVG00005011019) #10	GSTO1 (ENSGEVG00005010997) #12	CFAP43 (ENSGEVG00005010554) #13	SFR1 (ENSGEVG00005010464) #14	ENSGEVG00005010362	SLK (ENSGEVG00005010221) #16	STN1 (ENSGEVG00005010129) #17	SH3PXD2A (ENSGEVG00005009971) #18	NEURL1 (ENSGEVG00005009893) #19	CALHM3 (ENSGEVG00005009849) #20	CALHM1 (ENSGEVG00005009808) #21	CALHM2 (ENSGEVG00005009777) #22	PDCD11 (ENSGEVG00005009591) #23	ENSGEVG00005009520	TAF5 (ENSGEVG00005009475) #25	PCGF6 (ENSGEVG00005009433) #26	INA (ENSGEVG00005009390) #27	ENSGEVG00005009185	CNNM2 (ENSGEVG00005005911) #30	AS3MT (ENSGEVG00005005861) #31	BORCS7 (ENSGEVG00005005827) #32	CYP17A1 (ENSGEVG00005005795) #33	WBP1L (ENSGEVG00005005761) #34	SFXN2 (ENSGEVG00005005736) #35	ARL3 (ENSGEVG00005005712) #36
Abingdon island giant tortoise	MODERN SPECIES	1141									ENSCABG00000012803	SFR1 (ENSCABG00000012800) #14	ENSCABG00000012797	SLK (ENSCABG00000012791) #16	STN1 (ENSCABG00000012694) #17	SH3PXD2A (ENSCABG00000012673) #18	NEURL1 (ENSCABG00000012663) #19	CALHM3 (ENSCABG00000012660) #20	CALHM1 (ENSCABG00000012656) #21	CALHM2 (ENSCABG00000012652) #22	PDCD11 (ENSCABG00000012639) #23	ENSCABG00000012631	TAF5 (ENSCABG00000012628) #25	PCGF6 (ENSCABG00000012625) #26	INA (ENSCABG00000012623) #27	ENSCABG00000012619	CNNM2 (ENSCABG00000012617) #30
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Three-toed box turtle	MODERN SPECIES	39	ADD3 (ENSTMTG00000005001)	XPNPEP1 (ENSTMTG00000004946)	SORCS1 (ENSTMTG00000004623) #7	SORCS3 (ENSTMTG00000004223) #8	CFAP58 (ENSTMTG00000004140) #9	ITPRIP (ENSTMTG00000004126) #10	GSTO1 (ENSTMTG00000004095) #12	SFR1 (ENSTMTG00000004085) #14	ENSTMTG00000004055 #13	ENSTMTG00000003970 #13	ENSTMTG00000003930	SLK (ENSTMTG00000003888) #16	STN1 (ENSTMTG00000003849) #17	SH3PXD2A (ENSTMTG00000003816) #18	NEURL1 (ENSTMTG00000003710) #19	CALHM3 (ENSTMTG00000003689) #20	CALHM1 (ENSTMTG00000003677) #21	CALHM2 (ENSTMTG00000003669) #22	PDCD11 (ENSTMTG00000003588) #23	ENSTMTG00000003574	TAF5 (ENSTMTG00000003542) #25	ENSTMTG00000003510	PCGF6 (ENSTMTG00000003473) #26	INA (ENSTMTG00000003452) #27	ENSTMTG00000003377	CNNM2 (ENSTMTG00000003262) #30	AS3MT (ENSTMTG00000003237) #31	BORCS7 (ENSTMTG00000003229) #32	CYP17A1 (ENSTMTG00000003197) #33	WBP1L (ENSTMTG00000003185) #34	SFXN2 (ENSTMTG00000003157) #35
painted turtle	MODERN SPECIES	2388	EMC3 (ENSCPBG00000024351)	C3orf62 (ENSCPBG00000024358)	ENSCPBG00000024360	ENSCPBG00000024362	SORCS3 (ENSCPBG00000024367) #8	CFAP58 (ENSCPBG00000024380) #9	ITPRIP (ENSCPBG00000024382) #10	GSTO1 (ENSCPBG00000024383) #12	CFAP43 (ENSCPBG00000024387) #13	SFR1 (ENSCPBG00000024393) #14	ENSCPBG00000024394	SLK (ENSCPBG00000024408) #16	STN1 (ENSCPBG00000024481) #17	SH3PXD2A (ENSCPBG00000024482) #18	NEURL1 (ENSCPBG00000024483) #19	CALHM3 (ENSCPBG00000024484) #20	CALHM1 (ENSCPBG00000024485) #21	CALHM2 (ENSCPBG00000024486) #22	PDCD11 (ENSCPBG00000024487) #23	ENSCPBG00000024490	TAF5 (ENSCPBG00000024491) #25	PCGF6 (ENSCPBG00000024492) #26	INA (ENSCPBG00000024493) #27	ENSCPBG00000024494	CNNM2 (ENSCPBG00000024495) #30	AS3MT (ENSCPBG00000024496) #31	BORCS7 (ENSCPBG00000024497) #32	CYP17A1 (ENSCPBG00000024499) #33	WBP1L (ENSCPBG00000024501) #34	SFXN2 (ENSCPBG00000002343) #35	ARL3 (ENSCPBG00000002364) #36
Chinese turtle	MODERN SPECIES	893														SH3PXD2A (ENSPSIG00000005648) #18	NEURL1 (ENSPSIG00000005417) #19	CALHM3 (ENSPSIG00000005389) #20	CALHM1 (ENSPSIG00000005362) #21	CALHM2 (ENSPSIG00000005351) #22	PDCD11 (ENSPSIG00000005102) #23	ENSPSIG00000005062	TAF5 (ENSPSIG00000004990) #25	ENSPSIG00000000552	PCGF6 (ENSPSIG00000004981) #26	ENSPSIG00000004644	ENSPSIG00000004641	CNNM2 (ENSPSIG00000004321) #30	AS3MT (ENSPSIG00000004098) #31	CYP17A1 (ENSPSIG00000003991) #33	WBP1L (ENSPSIG00000003977) #34	ARL3 (ENSPSIG00000003938) #36	SFXN2 (ENSPSIG00000003923) #35
Mammalia	ANCESTRAL SPECIES	14	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Theria	ANCESTRAL SPECIES	26	ENSGT00940000155809	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Marsupialia	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Opossum	MODERN SPECIES		XPNPEP1 (ENSMODG00000010676)	SORCS1 (ENSMODG00000010737) #7	ENSMODG00000038934	SORCS3 (ENSMODG00000010798) #8	CFAP58 (ENSMODG00000010828) #9	ITPRIP (ENSMODG00000024804) #10	ENSMODG00000010839 #12	ENSMODG00000010896 #13	ENSMODG00000010902 #14	ENSMODG00000045729 #12	ENSMODG00000010881 #13	ENSMODG00000010961	SLK (ENSMODG00000010985) #16	SH3PXD2A (ENSMODG00000011016) #18	NEURL1 (ENSMODG00000011020) #19	CALHM3 (ENSMODG00000011027) #20	CALHM1 (ENSMODG00000011033) #21	ENSMODG00000038510	CALHM2 (ENSMODG00000011040) #22	PDCD11 (ENSMODG00000011077) #23	ATP5MK (ENSMODG00000025729) #24	TAF5 (ENSMODG00000011095) #25	PCGF6 (ENSMODG00000011120) #26	INA (ENSMODG00000011125) #27	ENSMODG00000011153	CNNM2 (ENSMODG00000011165) #30	BORCS7 (ENSMODG00000039361) #32	ENSMODG00000011205 #33	WBP1L (ENSMODG00000044404) #34	SFXN2 (ENSMODG00000011216) #35	ENSMODG00000011224 #36
Marsupialia_b	ANCESTRAL SPECIES		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000155351.r.a #12	ENSGT00530000064714.bb #13	ENSGT00390000018550 #14	ENSGT00940000155351.q #12	ENSGT00530000064714.cb #13	ENSGT00940000156478.k.b	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.cc #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a.k #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Common wonbat	MODERN SPECIES	581	ENSVURG00010025052	SORCS3 (ENSVURG00010025053) #8	CFAP58 (ENSVURG00010025055) #9	ITPRIP (ENSVURG00010025056) #10	ENSVURG00010025057 #12	ENSVURG00010025058 #13	ENSVURG00010025059 #14	ENSVURG00010025060 #12	ENSVURG00010000168 #13	ENSVURG00010000325	ENSVURG00010000337	SLK (ENSVURG00010000384) #16	STN1 (ENSVURG00010000526) #17	SH3PXD2A (ENSVURG00010000566) #18	NEURL1 (ENSVURG00010000653) #19	CALHM3 (ENSVURG00010000669) #20	CALHM1 (ENSVURG00010000699) #21	CALHM2 (ENSVURG00010000704) #22	PDCD11 (ENSVURG00010000713) #23	ENSVURG00010000772 #24	TAF5 (ENSVURG00010000796) #25	PCGF6 (ENSVURG00010000868) #26	INA (ENSVURG00010000939) #27	ENSVURG00010000957	CNNM2 (ENSVURG00010001013) #30	BORCS7 (ENSVURG00010001049) #32	CYP17A1 (ENSVURG00010001081) #33	WBP1L (ENSVURG00010001384) #34	SFXN2 (ENSVURG00010001410) #35	ARL3 (ENSVURG00010001426) #36	TRIM8 (ENSVURG00010001450) #37
koala	MODERN SPECIES	6																CALHM3 (ENSPCIG00000024475) #20	CALHM1 (ENSPCIG00000001165) #21	CALHM2 (ENSPCIG00000036143) #22	PDCD11 (ENSPCIG00000001118) #23	ENSPCIG00000001100 #24	TAF5 (ENSPCIG00000001090) #25	PCGF6 (ENSPCIG00000028313) #26	INA (ENSPCIG00000028312) #27	ENSPCIG00000028855	CNNM2 (ENSPCIG00000028980) #30	BORCS7 (ENSPCIG00000018033) #32	ENSPCIG00000018032 #33	WBP1L (ENSPCIG00000018031) #34	ARL3 (ENSPCIG00000028982) #36	TRIM8 (ENSPCIG00000028984) #37	SUFU (ENSPCIG00000028985)
Wallaby	MODERN SPECIES	9238																CALHM3 (ENSMEUG00000016476) #20	CALHM1 (ENSMEUG00000016467) #21
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000026020	SORCS1 (ENSSHAG00000018571) #7	SORCS3 (ENSSHAG00000012191) #8	CFAP58 (ENSSHAG00000016014) #9	ITPRIP (ENSSHAG00000022665) #10	ENSSHAG00000016340 #12	ENSSHAG00000016427 #13	ENSSHAG00000027679 #14	ENSSHAG00000016910 #13	ENSSHAG00000022398 #12	ENSSHAG00000017266	ENSSHAG00000017376 #16	STN1 (ENSSHAG00000017550) #17	SH3PXD2A (ENSSHAG00000017659) #18	NEURL1 (ENSSHAG00000018064) #19	CALHM3 (ENSSHAG00000018221) #20	CALHM1 (ENSSHAG00000025980) #21	CALHM2 (ENSSHAG00000022456) #22	PDCD11 (ENSSHAG00000018258) #23	ENSSHAG00000018296 #25	PCGF6 (ENSSHAG00000023796) #26	INA (ENSSHAG00000018358) #27	ENSSHAG00000018477	CNNM2 (ENSSHAG00000018509) #30	CYP17A1 (ENSSHAG00000018660) #33	BORCS7 (ENSSHAG00000018650) #32	WBP1L (ENSSHAG00000018684) #34	ENSSHAG00000018726 #35	ARL3 (ENSSHAG00000018738) #36	TRIM8 (ENSSHAG00000031236) #37	SUFU (ENSSHAG00000018777)
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Primates	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Catarrhini	ANCESTRAL SPECIES	18	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Hominoidea	ANCESTRAL SPECIES	11	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00910000146943	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Hominidae	ANCESTRAL SPECIES	13	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00910000146943	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Pan	ANCESTRAL SPECIES	16	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034.l #26	ENSGT00940000154418.a.a #27	ENSGT00390000001447.p.a ##28	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Bonobo	MODERN SPECIES	1	ENSPPAG00000029159	SORCS3 (ENSPPAG00000040207) #8	CFAP58 (ENSPPAG00000029617) #9	ITPRIP (ENSPPAG00000001710) #10	ENSPPAG00000011308	GSTO2 (ENSPPAG00000030499) #11	GSTO1 (ENSPPAG00000029433) #12	CFAP43 (ENSPPAG00000040294) #13	SFR1 (ENSPPAG00000037316) #14	ENSPPAG00000031577 #15	SLK (ENSPPAG00000043689) #16	STN1 (ENSPPAG00000030947) #17	SH3PXD2A (ENSPPAG00000040068) #18	ENSPPAG00000007628	ENSPPAG00000035559 #19	CALHM3 (ENSPPAG00000008882) #20	CALHM1 (ENSPPAG00000037598) #21	CALHM2 (ENSPPAG00000031003) #22	PDCD11 (ENSPPAG00000024593) #23	ATP5MK (ENSPPAG00000031402) #24	TAF5 (ENSPPAG00000038777) #25	ENSPPAG00000041879 #26	INA (ENSPPAG00000038377) #27	ENSPPAG00000032885 ##28	NT5C2 (ENSPPAG00000044029) #29	CNNM2 (ENSPPAG00000031457) #30	AS3MT (ENSPPAG00000040457) #31	ENSPPAG00000038677 #32	CYP17A1 (ENSPPAG00000033616) #33	WBP1L (ENSPPAG00000025524) #34	SFXN2 (ENSPPAG00000032477) #35
Chimpanzee	MODERN SPECIES	1	ENSPTRG00000044170	SORCS3 (ENSPTRG00000052782) #8	CFAP58 (ENSPTRG00000002928) #9	ITPRIP (ENSPTRG00000049544) #10	ENSPTRG00000045459	GSTO2 (ENSPTRG00000002926) #11	GSTO1 (ENSPTRG00000002925) #12	CFAP43 (ENSPTRG00000002924) #13	SFR1 (ENSPTRG00000002922) #14	COL17A1 (ENSPTRG00000002921) #15	SLK (ENSPTRG00000002920) #16	STN1 (ENSPTRG00000002919) #17	SH3PXD2A (ENSPTRG00000047766) #18	ENSPTRG00000046888	NEURL1 (ENSPTRG00000049609) #19	CALHM3 (ENSPTRG00000002915) #20	CALHM1 (ENSPTRG00000002914) #21	CALHM2 (ENSPTRG00000002913) #22	PDCD11 (ENSPTRG00000002911) #23	ATP5MK (ENSPTRG00000002910) #24	TAF5 (ENSPTRG00000002909) #25	PCGF6 (ENSPTRG00000002908) #26	INA (ENSPTRG00000002907) #27	ENSPTRG00000043239 ##28	NT5C2 (ENSPTRG00000002905) #29	CNNM2 (ENSPTRG00000002904) #30	AS3MT (ENSPTRG00000033989) #31	ENSPTRG00000002902 #32	CYP17A1 (ENSPTRG00000002900) #33	WBP1L (ENSPTRG00000049387) #34	SFXN2 (ENSPTRG00000002898) #35
Human	MODERN SPECIES	1	ADD3 (ENSG00000148700)	XPNPEP1 (ENSG00000108039)	SORCS1 (ENSG00000108018) #7	SORCS3 (ENSG00000156395) #8	CFAP58 (ENSG00000120051) #9	ITPRIP (ENSG00000148841) #10	GSTO2 (ENSG00000065621) #11	GSTO1 (ENSG00000148834) #12	CFAP43 (ENSG00000197748) #13	SFR1 (ENSG00000156384) #14	COL17A1 (ENSG00000065618) #15	SLK (ENSG00000065613) #16	STN1 (ENSG00000107960) #17	SH3PXD2A (ENSG00000107957) #18	NEURL1 (ENSG00000107954) #19	CALHM3 (ENSG00000183128) #20	CALHM1 (ENSG00000185933) #21	CALHM2 (ENSG00000138172) #22	PDCD11 (ENSG00000148843) #23	ATP5MK (ENSG00000173915) #24	TAF5 (ENSG00000148835) #25	PCGF6 (ENSG00000156374) #26	INA (ENSG00000148798) #27	RPEL1 (ENSG00000235376) #28	NT5C2 (ENSG00000076685) #29	CNNM2 (ENSG00000148842) #30	AS3MT (ENSG00000214435) #31	BORCS7 (ENSG00000166275) #32	CYP17A1 (ENSG00000148795) #33	WBP1L (ENSG00000166272) #34	SFXN2 (ENSG00000156398) #35
Gorilla	MODERN SPECIES	1	ENSGGOG00000024594	ENSGGOG00000027830	SORCS3 (ENSGGOG00000034886) #8	CFAP58 (ENSGGOG00000010254) #9	ITPRIP (ENSGGOG00000036641) #10	ENSGGOG00000042801	GSTO2 (ENSGGOG00000000637) #11	GSTO1 (ENSGGOG00000005064) #12	CFAP43 (ENSGGOG00000000899) #13	SFR1 (ENSGGOG00000025713) #14	COL17A1 (ENSGGOG00000000510) #15	SLK (ENSGGOG00000026079) #16	STN1 (ENSGGOG00000008979) #17	SH3PXD2A (ENSGGOG00000037810) #18	NEURL1 (ENSGGOG00000011670) #19	CALHM3 (ENSGGOG00000011662) #20	CALHM1 (ENSGGOG00000011656) #21	CALHM2 (ENSGGOG00000011652) #22	PDCD11 (ENSGGOG00000011621) #23	ENSGGOG00000037876 #24	ENSGGOG00000011616 #24	ENSGGOG00000005443 #25	ENSGGOG00000014657 #26	INA (ENSGGOG00000002914) #27	ENSGGOG00000023942 ##28	ENSGGOG00000037824 ##28	NT5C2 (ENSGGOG00000013257) #29	CNNM2 (ENSGGOG00000013254) #30	ENSGGOG00000016551 #31	BORCS7 (ENSGGOG00000027277) #32	CYP17A1 (ENSGGOG00000012438) #33
Orangutan	MODERN SPECIES	1	XPNPEP1 (ENSPPYG00000002639)	ENSPPYG00000035893	SORCS1 (ENSPPYG00000002638) #7	SORCS3 (ENSPPYG00000002637) #8	CFAP58 (ENSPPYG00000002636) #9	ITPRIP (ENSPPYG00000002635) #10	ENSPPYG00000033066 #11	GSTO1 (ENSPPYG00000002634) #12	CFAP43 (ENSPPYG00000002632) #13	SFR1 (ENSPPYG00000002631) #14	COL17A1 (ENSPPYG00000002630) #15	SLK (ENSPPYG00000002629) #16	STN1 (ENSPPYG00000002628) #17	SH3PXD2A (ENSPPYG00000002627) #18	NEURL1 (ENSPPYG00000002626) #19	ENSPPYG00000002625 #20	CALHM1 (ENSPPYG00000002624) #21	CALHM2 (ENSPPYG00000002623) #22	PDCD11 (ENSPPYG00000002621) #23	ENSPPYG00000002620 #24	TAF5 (ENSPPYG00000002619) #25	PCGF6 (ENSPPYG00000002618) #26	ENSPPYG00000040925	INA (ENSPPYG00000002617) #27	ENSPPYG00000031986 ##28	ENSPPYG00000007794	NT5C2 (ENSPPYG00000002616) #29	CNNM2 (ENSPPYG00000002615) #30	AS3MT (ENSPPYG00000002614) #31	BORCS7 (ENSPPYG00000002613) #32	CYP17A1 (ENSPPYG00000002611) #33
Gibbon	MODERN SPECIES	18	ENSNLEG00000012896	SORCS3 (ENSNLEG00000015381) #8	ENSNLEG00000018193	CFAP58 (ENSNLEG00000015366) #9	ITPRIP (ENSNLEG00000026941) #10	ENSNLEG00000015364	GSTO2 (ENSNLEG00000031495) #11	GSTO1 (ENSNLEG00000015358) #12	CFAP43 (ENSNLEG00000015332) #13	SFR1 (ENSNLEG00000028704) #14	COL17A1 (ENSNLEG00000015299) #15	SLK (ENSNLEG00000015288) #16	STN1 (ENSNLEG00000015282) #17	SH3PXD2A (ENSNLEG00000015269) #18	NEURL1 (ENSNLEG00000015266) #19	ENSNLEG00000028327 #20	CALHM1 (ENSNLEG00000015263) #21	CALHM2 (ENSNLEG00000015261) #22	PDCD11 (ENSNLEG00000026700) #23	ATP5MK (ENSNLEG00000032755) #24	TAF5 (ENSNLEG00000015245) #25	ENSNLEG00000033689 #26	INA (ENSNLEG00000015236) #27	ENSNLEG00000032264	NT5C2 (ENSNLEG00000015225) #29	CNNM2 (ENSNLEG00000015219) #30	AS3MT (ENSNLEG00000015217) #31	BORCS7 (ENSNLEG00000028788) #32	CYP17A1 (ENSNLEG00000015210) #33	WBP1L (ENSNLEG00000033256) #34	SFXN2 (ENSNLEG00000033903) #35
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943	ENSGT00940000154418.a.a.i.b #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Vervet Monkey	MODERN SPECIES	28	XPNPEP1 (ENSCSAG00000018453)	ENSCSAG00000018452	SORCS1 (ENSCSAG00000005204) #7	SORCS3 (ENSCSAG00000005234) #8	CFAP58 (ENSCSAG00000005244) #9	ITPRIP (ENSCSAG00000018451) #10	GSTO2 (ENSCSAG00000005247) #11	ENSCSAG00000005249 #12	CFAP43 (ENSCSAG00000005256) #13	SFR1 (ENSCSAG00000005258) #14	COL17A1 (ENSCSAG00000005300) #15	SLK (ENSCSAG00000005313) #16	STN1 (ENSCSAG00000005318) #17	SH3PXD2A (ENSCSAG00000005326) #18	NEURL1 (ENSCSAG00000005330) #19	CALHM3 (ENSCSAG00000005334) #20	CALHM1 (ENSCSAG00000005337) #21	CALHM2 (ENSCSAG00000005340) #22	PDCD11 (ENSCSAG00000005346) #23	ATP5MK (ENSCSAG00000005353) #24	TAF5 (ENSCSAG00000005356) #25	PCGF6 (ENSCSAG00000005362) #26	INA (ENSCSAG00000005368) #27	ENSCSAG00000005374	NT5C2 (ENSCSAG00000005380) #29	CNNM2 (ENSCSAG00000005384) #30	AS3MT (ENSCSAG00000005391) #31	BORCS7 (ENSCSAG00000005395) #32	CYP17A1 (ENSCSAG00000005397) #33	ENSCSAG00000005399 #34	SFXN2 (ENSCSAG00000005403) #35
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943.a	ENSGT00940000154418.a.a.i.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Macaca	ANCESTRAL SPECIES	11	ENSGT00900000143156.a.d	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00910000146943.a	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Pig-tailed macaque	MODERN SPECIES	550	ENSMNEG00000034959	ENSMNEG00000035014	SORCS3 (ENSMNEG00000037703) #8	CFAP58 (ENSMNEG00000034236) #9	ENSMNEG00000026574	GSTO2 (ENSMNEG00000032666) #11	ENSMNEG00000031275 #12	CFAP43 (ENSMNEG00000041229) #13	SFR1 (ENSMNEG00000041579) #14	COL17A1 (ENSMNEG00000030047) #15	SLK (ENSMNEG00000032689) #16	STN1 (ENSMNEG00000031906) #17	SH3PXD2A (ENSMNEG00000031119) #18	ENSMNEG00000007571	NEURL1 (ENSMNEG00000037296) #19	CALHM3 (ENSMNEG00000028186) #20	CALHM1 (ENSMNEG00000030938) #21	CALHM2 (ENSMNEG00000011289) #22	PDCD11 (ENSMNEG00000040726) #23	ATP5MK (ENSMNEG00000035593) #24	TAF5 (ENSMNEG00000035603) #25	PCGF6 (ENSMNEG00000030820) #26	INA (ENSMNEG00000043059) #27	ENSMNEG00000027383	NT5C2 (ENSMNEG00000036765) #29	CNNM2 (ENSMNEG00000032018) #30	AS3MT (ENSMNEG00000036598) #31	BORCS7 (ENSMNEG00000037640) #32	CYP17A1 (ENSMNEG00000041088) #33	WBP1L (ENSMNEG00000017708) #34	SFXN2 (ENSMNEG00000032769) #35
Macaca_a	ANCESTRAL SPECIES	13	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT01100000263539.b.a.a.a.a.b.b.a.a.a	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00910000147323
Rhesus	MODERN SPECIES	19	ENSMMUG00000049568	SORCS3 (ENSMMUG00000003610) #8	CFAP58 (ENSMMUG00000015339) #9	ITPRIP (ENSMMUG00000051949) #10	GSTO2 (ENSMMUG00000062166) #11	ENSMMUG00000057536	GSTO1 (ENSMMUG00000015334) #12	CFAP43 (ENSMMUG00000059603) #13	SFR1 (ENSMMUG00000044990) #14	COL17A1 (ENSMMUG00000015325) #15	SLK (ENSMMUG00000015324) #16	STN1 (ENSMMUG00000015323) #17	SH3PXD2A (ENSMMUG00000007067) #18	ENSMMUG00000058427	NEURL1 (ENSMMUG00000007064) #19	CALHM3 (ENSMMUG00000061162) #20	CALHM1 (ENSMMUG00000058129) #21	CALHM2 (ENSMMUG00000007061) #22	PDCD11 (ENSMMUG00000007058) #23	TAF5 (ENSMMUG00000011523) #25	PCGF6 (ENSMMUG00000008873) #26	INA (ENSMMUG00000008872) #27	NT5C2 (ENSMMUG00000003749) #29	CNNM2 (ENSMMUG00000003747) #30	AS3MT (ENSMMUG00000007662) #31	BORCS7 (ENSMMUG00000007660) #32	CYP17A1 (ENSMMUG00000017601) #33	SFXN2 (ENSMMUG00000052989) #34	ARL3 (ENSMMUG00000060039) #36	ENSMMUG00000047000	TRIM8 (ENSMMUG00000004394) #37
Crab-eating macaque	MODERN SPECIES	19	ENSMFAG00000050436	SORCS3 (ENSMFAG00000044111) #8	CFAP58 (ENSMFAG00000035977) #9	ITPRIP (ENSMFAG00000057374) #10	GSTO2 (ENSMFAG00000050681) #11	ENSMFAG00000061086	GSTO1 (ENSMFAG00000033599) #12	CFAP43 (ENSMFAG00000043638) #13	SFR1 (ENSMFAG00000033346) #14	COL17A1 (ENSMFAG00000038498) #15	SLK (ENSMFAG00000007328) #16	STN1 (ENSMFAG00000041817) #17	SH3PXD2A (ENSMFAG00000044985) #18	ENSMFAG00000030673	NEURL1 (ENSMFAG00000001140) #19	CALHM3 (ENSMFAG00000009610) #20	CALHM1 (ENSMFAG00000032380) #21	CALHM2 (ENSMFAG00000002974) #22	PDCD11 (ENSMFAG00000044058) #23	TAF5 (ENSMFAG00000031468) #25	PCGF6 (ENSMFAG00000001835) #26	INA (ENSMFAG00000040504) #27	NT5C2 (ENSMFAG00000035950) #29	AS3MT (ENSMFAG00000039839) #31	BORCS7 (ENSMFAG00000044610) #32	CYP17A1 (ENSMFAG00000002033) #33	WBP1L (ENSMFAG00000042677) #34	SFXN2 (ENSMFAG00000045149) #35	ARL3 (ENSMFAG00000057536) #36	TRIM8 (ENSMFAG00000046181) #37	SUFU (ENSMFAG00000038634)
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Olive baboon	MODERN SPECIES	2	ENSPANG00000039183	SORCS3 (ENSPANG00000020877) #8	CFAP58 (ENSPANG00000020883) #9	ITPRIP (ENSPANG00000020881) #10	GSTO2 (ENSPANG00000020880) #11	ENSPANG00000020878 #12	CFAP43 (ENSPANG00000020924) #13	SFR1 (ENSPANG00000020932) #14	ENSPANG00000043305	COL17A1 (ENSPANG00000020929) #15	SLK (ENSPANG00000020927) #16	STN1 (ENSPANG00000020926) #17	SH3PXD2A (ENSPANG00000020925) #18	ENSPANG00000043974	NEURL1 (ENSPANG00000020952) #19	CALHM3 (ENSPANG00000051037) #20	CALHM1 (ENSPANG00000020961) #21	CALHM2 (ENSPANG00000048513) #22	PDCD11 (ENSPANG00000020959) #23	ENSPANG00000034679 #24	TAF5 (ENSPANG00000020958) #25	PCGF6 (ENSPANG00000020957) #26	INA (ENSPANG00000020956) #27	NT5C2 (ENSPANG00000020954) #29	CNNM2 (ENSPANG00000020976) #30	AS3MT (ENSPANG00000020981) #31	BORCS7 (ENSPANG00000020979) #32	CYP17A1 (ENSPANG00000020982) #33	WBP1L (ENSPANG00000051243) #34	SFXN2 (ENSPANG00000020991) #35	ARL3 (ENSPANG00000033639) #36
Cercopithecinae_d	ANCESTRAL SPECIES	57		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00910000147296	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Drill	MODERN SPECIES	660		SORCS1 (ENSMLEG00000037576) #7	SORCS3 (ENSMLEG00000038863) #8	CFAP58 (ENSMLEG00000039227) #9	ENSMLEG00000039989	ENSMLEG00000019788	GSTO2 (ENSMLEG00000039283) #11	GSTO1 (ENSMLEG00000042764) #12	CFAP43 (ENSMLEG00000028785) #13	SFR1 (ENSMLEG00000043379) #14	COL17A1 (ENSMLEG00000020402) #15	SLK (ENSMLEG00000023706) #16	STN1 (ENSMLEG00000040619) #17	SH3PXD2A (ENSMLEG00000030170) #18	NEURL1 (ENSMLEG00000037258) #19	CALHM3 (ENSMLEG00000035391) #20	CALHM1 (ENSMLEG00000028793) #21	CALHM2 (ENSMLEG00000029707) #22	PDCD11 (ENSMLEG00000040978) #23	ATP5MK (ENSMLEG00000027736) #24	TAF5 (ENSMLEG00000029550) #25	PCGF6 (ENSMLEG00000038894) #26	ENSMLEG00000036796	NT5C2 (ENSMLEG00000040980) #29	ENSMLEG00000004885 #30	AS3MT (ENSMLEG00000029524) #31	BORCS7 (ENSMLEG00000031380) #32	CYP17A1 (ENSMLEG00000043505) #33	WBP1L (ENSMLEG00000039529) #34	SFXN2 (ENSMLEG00000028110) #35	ARL3 (ENSMLEG00000037047) #36
Sooty mangabey	MODERN SPECIES	598	ENSCATG00000043991	SORCS3 (ENSCATG00000030472) #8	CFAP58 (ENSCATG00000038482) #9	ENSCATG00000044126	ENSCATG00000038057	GSTO2 (ENSCATG00000033970) #11	GSTO1 (ENSCATG00000020176) #12	CFAP43 (ENSCATG00000030702) #13	SFR1 (ENSCATG00000029645) #14	COL17A1 (ENSCATG00000043526) #15	SLK (ENSCATG00000031756) #16	STN1 (ENSCATG00000043103) #17	SH3PXD2A (ENSCATG00000028223) #18	ENSCATG00000009792	NEURL1 (ENSCATG00000041066) #19	CALHM3 (ENSCATG00000034360) #20	CALHM1 (ENSCATG00000044820) #21	CALHM2 (ENSCATG00000041923) #22	PDCD11 (ENSCATG00000044331) #23	ATP5MK (ENSCATG00000039772) #24	TAF5 (ENSCATG00000038549) #25	PCGF6 (ENSCATG00000041896) #26	INA (ENSCATG00000038727) #27	NT5C2 (ENSCATG00000030773) #29	CNNM2 (ENSCATG00000041464) #30	AS3MT (ENSCATG00000037118) #31	BORCS7 (ENSCATG00000035080) #32	CYP17A1 (ENSCATG00000041371) #33	WBP1L (ENSCATG00000041061) #34	SFXN2 (ENSCATG00000035934) #35	ARL3 (ENSCATG00000019333) #36
Rhinopithecus	ANCESTRAL SPECIES	11		ENSGT01030000234563.b.a.b.b.a #7	ENSGT01090000260040.a.a.a.q.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00940000162030 #11	ENSGT00940000155351.bb.c.a #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00910000147434	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.i.b #27	ENSGT00910000146943	ENSGT00940000154418.a.a.j #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Golden snub-nosed monkey	MODERN SPECIES	3053						CFAP58 (ENSRROG00000044074) #9	GSTO2 (ENSRROG00000036386) #11	ENSRROG00000031846 #12	CFAP43 (ENSRROG00000032126) #13	SFR1 (ENSRROG00000024116) #14	COL17A1 (ENSRROG00000031066) #15	SLK (ENSRROG00000039991) #16	STN1 (ENSRROG00000013903) #17	SH3PXD2A (ENSRROG00000044760) #18	NEURL1 (ENSRROG00000042825) #19	CALHM3 (ENSRROG00000010205) #20	CALHM1 (ENSRROG00000011380) #21	CALHM2 (ENSRROG00000039430) #22	PDCD11 (ENSRROG00000030483) #23	ENSRROG00000043783 #24	TAF5 (ENSRROG00000040494) #25	PCGF6 (ENSRROG00000030643) #26	ENSRROG00000027343	INA (ENSRROG00000044855) #27	NT5C2 (ENSRROG00000040128) #29	CNNM2 (ENSRROG00000041690) #30	AS3MT (ENSRROG00000030773) #31	BORCS7 (ENSRROG00000030916) #32	CYP17A1 (ENSRROG00000039877) #33	WBP1L (ENSRROG00000035869) #34	SFXN2 (ENSRROG00000028643) #35
Black snub-nosed monkey	MODERN SPECIES	1538		SORCS1 (ENSRBIG00000041454) #7	ENSRBIG00000033505	SORCS3 (ENSRBIG00000033222) #8	CFAP58 (ENSRBIG00000041485) #9	GSTO2 (ENSRBIG00000040325) #11	ENSRBIG00000034994 #12	CFAP43 (ENSRBIG00000033041) #13	SFR1 (ENSRBIG00000043888) #14	COL17A1 (ENSRBIG00000018038) #15	SLK (ENSRBIG00000037221) #16	STN1 (ENSRBIG00000039819) #17	SH3PXD2A (ENSRBIG00000033834) #18	ENSRBIG00000044735	NEURL1 (ENSRBIG00000032145) #19	CALHM3 (ENSRBIG00000030795) #20	CALHM1 (ENSRBIG00000029567) #21	CALHM2 (ENSRBIG00000032217) #22	PDCD11 (ENSRBIG00000011889) #23	ENSRBIG00000030165 #24	TAF5 (ENSRBIG00000043209) #25	PCGF6 (ENSRBIG00000034630) #26	ENSRBIG00000042921 #27	NT5C2 (ENSRBIG00000044011) #29	CNNM2 (ENSRBIG00000037414) #30	AS3MT (ENSRBIG00000038013) #31	BORCS7 (ENSRBIG00000043045) #32	CYP17A1 (ENSRBIG00000041280) #33	WBP1L (ENSRBIG00000028283) #34	SFXN2 (ENSRBIG00000041623) #35	ARL3 (ENSRBIG00000031934) #36
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00910000146943.c	ENSGT00940000154418.a.a.h.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33
Cebidae	ANCESTRAL SPECIES	17	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00940000154418.a.a.h.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Cebidae_a	ANCESTRAL SPECIES	13	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.bb #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a.h.b #27	ENSGT00910000146943.d	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Capuchin	MODERN SPECIES	71												SLK (ENSCCAG00000000586) #16	STN1 (ENSCCAG00000020507) #17	SH3PXD2A (ENSCCAG00000028177) #18	NEURL1 (ENSCCAG00000029247) #19	CALHM3 (ENSCCAG00000034201) #20	CALHM1 (ENSCCAG00000011595) #21	CALHM2 (ENSCCAG00000023950) #22	PDCD11 (ENSCCAG00000018950) #23	ENSCCAG00000019694 #24	TAF5 (ENSCCAG00000025917) #25	PCGF6 (ENSCCAG00000037838) #26	ENSCCAG00000026135	INA (ENSCCAG00000022073) #27	ENSCCAG00000032845	NT5C2 (ENSCCAG00000026539) #29	CNNM2 (ENSCCAG00000023803) #30	AS3MT (ENSCCAG00000020106) #31	BORCS7 (ENSCCAG00000033857) #32	ENSCCAG00000035022	CYP17A1 (ENSCCAG00000022170) #33
Bolivian squirrel monkey	MODERN SPECIES	47	ADD3 (ENSSBOG00000030582)	XPNPEP1 (ENSSBOG00000025876)	ENSSBOG00000029669	SORCS1 (ENSSBOG00000030010) #7	SORCS3 (ENSSBOG00000014957) #8	CFAP58 (ENSSBOG00000020254) #9	ITPRIP (ENSSBOG00000012140) #10	GSTO2 (ENSSBOG00000034665) #11	GSTO1 (ENSSBOG00000020871) #12	CFAP43 (ENSSBOG00000027311) #13	COL17A1 (ENSSBOG00000032158) #15	SLK (ENSSBOG00000027292) #16	STN1 (ENSSBOG00000031516) #17	SH3PXD2A (ENSSBOG00000028219) #18	NEURL1 (ENSSBOG00000028649) #19	CALHM3 (ENSSBOG00000024427) #20	CALHM1 (ENSSBOG00000027301) #21	CALHM2 (ENSSBOG00000030532) #22	PDCD11 (ENSSBOG00000030308) #23	ATP5MK (ENSSBOG00000030019) #24	TAF5 (ENSSBOG00000020350) #25	PCGF6 (ENSSBOG00000021501) #26	INA (ENSSBOG00000020360) #27	NT5C2 (ENSSBOG00000020827) #29	CNNM2 (ENSSBOG00000030131) #30	ENSSBOG00000031782	AS3MT (ENSSBOG00000033111) #31	BORCS7 (ENSSBOG00000031523) #32	CYP17A1 (ENSSBOG00000020558) #33	WBP1L (ENSSBOG00000009511) #34	SFXN2 (ENSSBOG00000026232) #35
Marmoset	MODERN SPECIES	3	SORCS1 (ENSCJAG00000018526) #7	SORCS3 (ENSCJAG00000018513) #8	CFAP58 (ENSCJAG00000018501) #9	ITPRIP (ENSCJAG00000018498) #10	GSTO2 (ENSCJAG00000018486) #11	ENSCJAG00000018474 #12	CFAP43 (ENSCJAG00000018443) #13	SFR1 (ENSCJAG00000018436) #14	ENSCJAG00000079409	COL17A1 (ENSCJAG00000018404) #15	SLK (ENSCJAG00000018363) #16	ENSCJAG00000076134	STN1 (ENSCJAG00000040388) #17	SH3PXD2A (ENSCJAG00000018307) #18	NEURL1 (ENSCJAG00000047912) #19	CALHM3 (ENSCJAG00000018295) #20	CALHM1 (ENSCJAG00000018294) #21	CALHM2 (ENSCJAG00000018290) #22	PDCD11 (ENSCJAG00000018257) #23	ENSCJAG00000018253 #24	TAF5 (ENSCJAG00000018213) #25	INA (ENSCJAG00000018178) #27	PCGF6 (ENSCJAG00000018192) #26	NT5C2 (ENSCJAG00000018148) #29	CNNM2 (ENSCJAG00000018118) #30	BORCS7 (ENSCJAG00000039007) #32	CYP17A1 (ENSCJAG00000018089) #33	WBP1L (ENSCJAG00000046138) #34	SFXN2 (ENSCJAG00000018068) #35	ARL3 (ENSCJAG00000040244) #36	TRIM8 (ENSCJAG00000018057) #37
Mas night monkey	MODERN SPECIES	658	CFAP58 (ENSANAG00000028104) #9	ENSANAG00000035279	ITPRIP (ENSANAG00000034870) #10	GSTO2 (ENSANAG00000034517) #11	GSTO1 (ENSANAG00000033006) #12	CFAP43 (ENSANAG00000032094) #13	SFR1 (ENSANAG00000031275) #14	ENSANAG00000030939	COL17A1 (ENSANAG00000027237) #15	ENSANAG00000026163	SLK (ENSANAG00000020590) #16	ENSANAG00000038444	STN1 (ENSANAG00000038147) #17	SH3PXD2A (ENSANAG00000037670) #18	NEURL1 (ENSANAG00000037067) #19	CALHM3 (ENSANAG00000032187) #20	CALHM1 (ENSANAG00000032120) #21	CALHM2 (ENSANAG00000027035) #22	PDCD11 (ENSANAG00000034576) #23	ATP5MK (ENSANAG00000033958) #24	TAF5 (ENSANAG00000033631) #25	PCGF6 (ENSANAG00000028199) #26	ENSANAG00000027437	ENSANAG00000027873 #27	NT5C2 (ENSANAG00000024718) #29	CNNM2 (ENSANAG00000020034) #30	AS3MT (ENSANAG00000038067) #31	ENSANAG00000037880 #32	CYP17A1 (ENSANAG00000022241) #33	WBP1L (ENSANAG00000034043) #34	SFXN2 (ENSANAG00000031917) #35
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Bushbaby	MODERN SPECIES	136	XPNPEP1 (ENSOGAG00000016262)	ENSOGAG00000030478	SORCS1 (ENSOGAG00000007257) #7	SORCS3 (ENSOGAG00000016699) #8	CFAP58 (ENSOGAG00000016440) #9	ITPRIP (ENSOGAG00000028677) #10	GSTO2 (ENSOGAG00000016437) #11	GSTO1 (ENSOGAG00000016045) #12	CFAP43 (ENSOGAG00000017132) #13	COL17A1 (ENSOGAG00000017124) #15	SLK (ENSOGAG00000017119) #16	STN1 (ENSOGAG00000008722) #17	SH3PXD2A (ENSOGAG00000008718) #18	NEURL1 (ENSOGAG00000008711) #19	ENSOGAG00000025475	CALHM3 (ENSOGAG00000008708) #20	CALHM1 (ENSOGAG00000032146) #21	CALHM2 (ENSOGAG00000008704) #22	PDCD11 (ENSOGAG00000008683) #23	TAF5 (ENSOGAG00000008680) #25	PCGF6 (ENSOGAG00000017097) #26	INA (ENSOGAG00000029454) #27	ENSOGAG00000004346	CNNM2 (ENSOGAG00000004343) #30	AS3MT (ENSOGAG00000004341) #31	BORCS7 (ENSOGAG00000032692) #32	CYP17A1 (ENSOGAG00000013530) #33	WBP1L (ENSOGAG00000003309) #34	SFXN2 (ENSOGAG00000003633) #35	ARL3 (ENSOGAG00000003631) #36	TRIM8 (ENSOGAG00000003628) #37
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849.c #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Mouse lemur	MODERN SPECIES	6	MXI1 (ENSMICG00000006873)	ADD3 (ENSMICG00000006859)	XPNPEP1 (ENSMICG00000006830)	SORCS1 (ENSMICG00000007006) #7	SORCS3 (ENSMICG00000016273) #8	CFAP58 (ENSMICG00000016245) #9	GSTO2 (ENSMICG00000016220) #11	GSTO1 (ENSMICG00000026906) #12	CFAP43 (ENSMICG00000004417) #13	SFR1 (ENSMICG00000037306) #14	COL17A1 (ENSMICG00000004394) #15	SLK (ENSMICG00000004384) #16	STN1 (ENSMICG00000012547) #17	SH3PXD2A (ENSMICG00000012520) #18	NEURL1 (ENSMICG00000012507) #19	CALHM3 (ENSMICG00000041906) #20	CALHM1 (ENSMICG00000027967) #21	CALHM2 (ENSMICG00000012493) #22	PDCD11 (ENSMICG00000012421) #23	ATP5MK (ENSMICG00000012417) #24	TAF5 (ENSMICG00000012393) #25	PCGF6 (ENSMICG00000034497) #26	INA (ENSMICG00000000504) #27	ENSMICG00000012316 #29	CNNM2 (ENSMICG00000012298) #30	AS3MT (ENSMICG00000012292) #31	ENSMICG00000047930 #32	CYP17A1 (ENSMICG00000012275) #33	WBP1L (ENSMICG00000012267) #34	SFXN2 (ENSMICG00000012256) #35	ARL3 (ENSMICG00000012249) #36
Lemuriformes_a	ANCESTRAL SPECIES	21			ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184.c #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849.c #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Greater bamboo lemur	MODERN SPECIES	194	ENSPSMG00000013077	SORCS1 (ENSPSMG00000013052) #7	ENSPSMG00000013000	SORCS3 (ENSPSMG00000012981) #8	CFAP58 (ENSPSMG00000012943) #9	ITPRIP (ENSPSMG00000012904) #10	GSTO2 (ENSPSMG00000012899) #11	GSTO1 (ENSPSMG00000012842) #12	CFAP43 (ENSPSMG00000012803) #13	SFR1 (ENSPSMG00000012770) #14	COL17A1 (ENSPSMG00000012758) #15	SLK (ENSPSMG00000012717) #16	STN1 (ENSPSMG00000012647) #17	SH3PXD2A (ENSPSMG00000012614) #18	NEURL1 (ENSPSMG00000012575) #19	CALHM3 (ENSPSMG00000012562) #20	CALHM1 (ENSPSMG00000012549) #21	CALHM2 (ENSPSMG00000012544) #22	PDCD11 (ENSPSMG00000012508) #23	ATP5MK (ENSPSMG00000012393) #24	TAF5 (ENSPSMG00000012382) #25	PCGF6 (ENSPSMG00000012356) #26	INA (ENSPSMG00000012332) #27	ENSPSMG00000012304	ENSPSMG00000012219	CNNM2 (ENSPSMG00000012210) #30	AS3MT (ENSPSMG00000012188) #31	BORCS7 (ENSPSMG00000012149) #32	CYP17A1 (ENSPSMG00000012142) #33	WBP1L (ENSPSMG00000012116) #34	SFXN2 (ENSPSMG00000012074) #35
Coquerels sifaka	MODERN SPECIES	870					SORCS1 (ENSPCOG00000024071) #7	SORCS3 (ENSPCOG00000019728) #8	CFAP58 (ENSPCOG00000014925) #9	GSTO2 (ENSPCOG00000014365) #11	CFAP43 (ENSPCOG00000023452) #13	SFR1 (ENSPCOG00000024305) #14	COL17A1 (ENSPCOG00000016202) #15	SLK (ENSPCOG00000016155) #16	STN1 (ENSPCOG00000017648) #17	SH3PXD2A (ENSPCOG00000015981) #18	NEURL1 (ENSPCOG00000015128) #19	CALHM3 (ENSPCOG00000025456) #20	CALHM1 (ENSPCOG00000015513) #21	CALHM2 (ENSPCOG00000017708) #22	PDCD11 (ENSPCOG00000023327) #23	ATP5MK (ENSPCOG00000023807) #24	TAF5 (ENSPCOG00000002819) #25	PCGF6 (ENSPCOG00000027010) #26	INA (ENSPCOG00000028040) #27	NT5C2 (ENSPCOG00000015418) #29	CNNM2 (ENSPCOG00000017458) #30	AS3MT (ENSPCOG00000019900) #31	ENSPCOG00000014724 #32	CYP17A1 (ENSPCOG00000003691) #33	WBP1L (ENSPCOG00000020010) #34	SFXN2 (ENSPCOG00000024349) #35	ARL3 (ENSPCOG00000024271) #36
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Tree shrew	MODERN SPECIES	2418														SH3PXD2A (ENSTBEG00000006182) #18	NEURL1 (ENSTBEG00000005609) #19	CALHM3 (ENSTBEG00000004807) #20	ENSTBEG00000004679 #21	CALHM2 (ENSTBEG00000004568) #22	ENSTBEG00000004295	PDCD11 (ENSTBEG00000001893) #23	ATP5MK (ENSTBEG00000001645) #24	TAF5 (ENSTBEG00000000500) #25
Glires	ANCESTRAL SPECIES	16	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Lagomorpha	ANCESTRAL SPECIES	17	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Rabbit	MODERN SPECIES	9	SORCS3 (ENSOCUG00000013880) #8	ENSOCUG00000031917	CFAP58 (ENSOCUG00000008719) #9	ITPRIP (ENSOCUG00000008713) #10	GSTO2 (ENSOCUG00000008708) #11	GSTO1 (ENSOCUG00000008702) #12	CFAP43 (ENSOCUG00000008688) #13	SFR1 (ENSOCUG00000012794) #14	COL17A1 (ENSOCUG00000003049) #15	SLK (ENSOCUG00000003035) #16	ENSOCUG00000038741	STN1 (ENSOCUG00000003028) #17	ENSOCUG00000037086	SH3PXD2A (ENSOCUG00000013769) #18	NEURL1 (ENSOCUG00000013760) #19	CALHM3 (ENSOCUG00000025668) #20	CALHM1 (ENSOCUG00000027986) #21	CALHM2 (ENSOCUG00000006336) #22	PDCD11 (ENSOCUG00000006312) #23	ENSOCUG00000033131 #24	TAF5 (ENSOCUG00000006303) #25	PCGF6 (ENSOCUG00000012441) #26	INA (ENSOCUG00000004969) #27	ENSOCUG00000009107	CNNM2 (ENSOCUG00000009098) #30	AS3MT (ENSOCUG00000000626) #31	ENSOCUG00000037788 #32	ENSOCUG00000023839	CYP17A1 (ENSOCUG00000017790) #33	WBP1L (ENSOCUG00000021890) #34	SFXN2 (ENSOCUG00000025541) #35
Pika	MODERN SPECIES	2102							GSTO2 (ENSOPRG00000010910) #11	GSTO1 (ENSOPRG00000010894) #12	CFAP43 (ENSOPRG00000010835) #13	SFR1 (ENSOPRG00000010818) #14	COL17A1 (ENSOPRG00000010749) #15	SLK (ENSOPRG00000010724) #16	STN1 (ENSOPRG00000010707) #17	SH3PXD2A (ENSOPRG00000010687) #18	NEURL1 (ENSOPRG00000010668) #19	CALHM3 (ENSOPRG00000010659) #20	CALHM1 (ENSOPRG00000010656) #21	CALHM2 (ENSOPRG00000010654) #22	PDCD11 (ENSOPRG00000010593) #23	ATP5MK (ENSOPRG00000010588) #24	ENSOPRG00000010551 #25
Rodentia	ANCESTRAL SPECIES	16	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Kangaroo rat	MODERN SPECIES	355	ENSDORG00000007663	Sorcs1 (ENSDORG00000002322) #7	Sorcs3 (ENSDORG00000001731) #8	Cfap58 (ENSDORG00000004546) #9	Itprip (ENSDORG00000008954) #10	Gsto2 (ENSDORG00000008953) #11	Gsto1 (ENSDORG00000008950) #12	Cfap43 (ENSDORG00000008947) #13	ENSDORG00000008943 #14	ENSDORG00000028434	Col17a1 (ENSDORG00000009335) #15	Slk (ENSDORG00000008154) #16	Stn1 (ENSDORG00000005994) #17	Sh3pxd2a (ENSDORG00000010430) #18	Neurl1a (ENSDORG00000010429) #19	Calhm3 (ENSDORG00000010428) #20	Calhm1 (ENSDORG00000010427) #21	Calhm2 (ENSDORG00000010426) #22	Pdcd11 (ENSDORG00000010420) #23	Atp5md (ENSDORG00000010419) #24	Taf5 (ENSDORG00000010418) #25	Pcgf6 (ENSDORG00000027870) #26	Ina (ENSDORG00000027651) #27	Nt5c2 (ENSDORG00000005467) #29	As3mt (ENSDORG00000010407) #31	Borcs7 (ENSDORG00000004480) #32	Cyp17a1 (ENSDORG00000006774) #33	Wbp1l (ENSDORG00000002274) #34	Sfxn2 (ENSDORG00000002258) #35	Arl3 (ENSDORG00000012086) #36	Trim8 (ENSDORG00000027571) #37
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Lesser Egyptian jerboa	MODERN SPECIES	70	Sorcs1 (ENSJJAG00000020651) #7	ENSJJAG00000023532	Sorcs3 (ENSJJAG00000012838) #8	Cfap58 (ENSJJAG00000022379) #9	ENSJJAG00000016144	ENSJJAG00000021535	Itprip (ENSJJAG00000000469) #10	Gsto2 (ENSJJAG00000014900) #11	Gsto1 (ENSJJAG00000018251) #12	Cfap43 (ENSJJAG00000024398) #13	Col17a1 (ENSJJAG00000020946) #15	Slk (ENSJJAG00000017467) #16	Stn1 (ENSJJAG00000020389) #17	Sh3pxd2a (ENSJJAG00000010532) #18	Neurl1a (ENSJJAG00000015435) #19	Calhm3 (ENSJJAG00000022667) #20	Calhm1 (ENSJJAG00000009035) #21	Calhm2 (ENSJJAG00000017511) #22	Pdcd11 (ENSJJAG00000015523) #23	Atp5md (ENSJJAG00000018060) #24	Taf5 (ENSJJAG00000002025) #25	Ina (ENSJJAG00000024219) #27	Nt5c2 (ENSJJAG00000023674) #29	Cnnm2 (ENSJJAG00000024042) #30	As3mt (ENSJJAG00000017269) #31	Borcs7 (ENSJJAG00000019848) #32	ENSJJAG00000007546	Cyp17a1 (ENSJJAG00000020313) #33	Wbp1l (ENSJJAG00000005618) #34	Sfxn2 (ENSJJAG00000020334) #35	Arl3 (ENSJJAG00000001249) #36
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Upper Galilee mountains blind mole rat	MODERN SPECIES	1300					Sorcs1 (ENSNGAG00000022400) #7	Sorcs3 (ENSNGAG00000009911) #8	Cfap58 (ENSNGAG00000023340) #9	Gsto2 (ENSNGAG00000023312) #11	Gsto1 (ENSNGAG00000016801) #12	Col17a1 (ENSNGAG00000014613) #15	Slk (ENSNGAG00000013115) #16	Stn1 (ENSNGAG00000023986) #17	ENSNGAG00000022667	Sh3pxd2a (ENSNGAG00000005200) #18	Neurl1a (ENSNGAG00000008250) #19	Calhm3 (ENSNGAG00000003356) #20	Calhm1 (ENSNGAG00000022846) #21	Calhm2 (ENSNGAG00000021638) #22	Pdcd11 (ENSNGAG00000018143) #23	Atp5md (ENSNGAG00000019237) #24	Taf5 (ENSNGAG00000019082) #25	Pcgf6 (ENSNGAG00000004236) #26	Ina (ENSNGAG00000023775) #27	ENSNGAG00000020356	Nt5c2 (ENSNGAG00000014147) #29	Cnnm2 (ENSNGAG00000021894) #30	As3mt (ENSNGAG00000021235) #31	Borcs7 (ENSNGAG00000020067) #32	Cyp17a1 (ENSNGAG00000023337) #33	Wbp1l (ENSNGAG00000006319) #34	Sfxn2 (ENSNGAG00000013387) #35
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000155257.e	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00940000155257.e	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Northern American deer mouse	MODERN SPECIES		Sorcs1 (ENSPEMG00000003793) #7	ENSPEMG00000025798	ENSPEMG00000026304	Sorcs3 (ENSPEMG00000016181) #8	Cfap58 (ENSPEMG00000023665) #9	Itprip (ENSPEMG00000025439) #10	Gsto2 (ENSPEMG00000013574) #11	ENSPEMG00000000407 #12	Cfap43 (ENSPEMG00000007262) #13	ENSPEMG00000010098 #14	Col17a1 (ENSPEMG00000010272) #15	Slk (ENSPEMG00000003363) #16	Stn1 (ENSPEMG00000013944) #17	Sh3pxd2a (ENSPEMG00000028132) #18	Neurl1a (ENSPEMG00000000552) #19	Calhm3 (ENSPEMG00000018627) #20	Calhm1 (ENSPEMG00000010575) #21	Calhm2 (ENSPEMG00000016278) #22	Pdcd11 (ENSPEMG00000010315) #23	ENSPEMG00000000483 #24	Taf5 (ENSPEMG00000002770) #25	Pcgf6 (ENSPEMG00000003171) #26	Ina (ENSPEMG00000007890) #27	Nt5c2 (ENSPEMG00000003970) #29	Cnnm2 (ENSPEMG00000017920) #30	As3mt (ENSPEMG00000011699) #31	Borcs7 (ENSPEMG00000030674) #32	Cyp17a1 (ENSPEMG00000016883) #33	Wbp1l (ENSPEMG00000002955) #34	Sfxn2 (ENSPEMG00000012438) #35	Arl3 (ENSPEMG00000012608) #36
Prairie vole	MODERN SPECIES	16	Add3 (ENSMOCG00000012421)	Xpnpep1 (ENSMOCG00000018997)	Sorcs1 (ENSMOCG00000013093) #7	Sorcs3 (ENSMOCG00000022537) #8	Cfap58 (ENSMOCG00000019696) #9	Itprip (ENSMOCG00000018021) #10	Gsto2 (ENSMOCG00000016225) #11	Gsto1 (ENSMOCG00000009660) #12	Cfap43 (ENSMOCG00000020363) #13	Sfr1 (ENSMOCG00000008461) #14	Col17a1 (ENSMOCG00000011193) #15	Slk (ENSMOCG00000017350) #16	Stn1 (ENSMOCG00000009637) #17	Sh3pxd2a (ENSMOCG00000019474) #18	Neurl1a (ENSMOCG00000022886) #19	Calhm3 (ENSMOCG00000021541) #20	Calhm1 (ENSMOCG00000000659) #21	Calhm2 (ENSMOCG00000018955) #22	Pdcd11 (ENSMOCG00000021792) #23	ENSMOCG00000013733 #24	Taf5 (ENSMOCG00000014640) #25	Pcgf6 (ENSMOCG00000014072) #26	ENSMOCG00000015820 #27	Nt5c2 (ENSMOCG00000017482) #29	ENSMOCG00000002709	Cnnm2 (ENSMOCG00000015680) #30	As3mt (ENSMOCG00000008340) #31	Borcs7 (ENSMOCG00000013474) #32	Cyp17a1 (ENSMOCG00000003696) #33	Wbp1l (ENSMOCG00000022618) #34	Sfxn2 (ENSMOCG00000018233) #35
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000155257.e	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Golden Hamster	MODERN SPECIES	617	Xpnpep1 (ENSMAUG00000012685)	Sorcs1 (ENSMAUG00000018951) #7	ENSMAUG00000013138	Sorcs3 (ENSMAUG00000015825) #8	Cfap58 (ENSMAUG00000013160) #9	Itprip (ENSMAUG00000013125) #10	Gsto2 (ENSMAUG00000014690) #11	Gsto1 (ENSMAUG00000013312) #12	Cfap43 (ENSMAUG00000013498) #13	ENSMAUG00000014420 #14	Col17a1 (ENSMAUG00000013570) #15	Slk (ENSMAUG00000015490) #16	Stn1 (ENSMAUG00000015671) #17	Sh3pxd2a (ENSMAUG00000015375) #18	Neurl1a (ENSMAUG00000017257) #19	Calhm3 (ENSMAUG00000015186) #20	Calhm2 (ENSMAUG00000015326) #22	Pdcd11 (ENSMAUG00000014924) #23	ENSMAUG00000013644 #24	Taf5 (ENSMAUG00000013709) #25	Pcgf6 (ENSMAUG00000017896) #26	ENSMAUG00000018081 #29	Cnnm2 (ENSMAUG00000016097) #30	Borcs7 (ENSMAUG00000016537) #32	Cyp17a1 (ENSMAUG00000015290) #33	Sfxn2 (ENSMAUG00000015554) #35	ENSMAUG00000014603 #36	Trim8 (ENSMAUG00000015163) #37	Sufu (ENSMAUG00000017018)	ENSMAUG00000017290	Mfsd13a (ENSMAUG00000014106)
Chinese hamster chok1gshd	MODERN SPECIES	215	Add3 (ENSCGRG00001016019)	Xpnpep1 (ENSCGRG00001023199)	Sorcs1 (ENSCGRG00001015262) #7	Sorcs3 (ENSCGRG00001013586) #8	Cfap58 (ENSCGRG00001018536) #9	Itprip (ENSCGRG00001015730) #10	Gsto2 (ENSCGRG00001019874) #11	Gsto1 (ENSCGRG00001001908) #12	Cfap43 (ENSCGRG00001011254) #13	ENSCGRG00001015549 #14	Col17a1 (ENSCGRG00001022203) #15	Slk (ENSCGRG00001015388) #16	Stn1 (ENSCGRG00001023175) #17	Sh3pxd2a (ENSCGRG00001019958) #18	Neurl1a (ENSCGRG00001021464) #19	Calhm3 (ENSCGRG00001022306) #20	Calhm1 (ENSCGRG00001023224) #21	Calhm2 (ENSCGRG00001023936) #22	Pdcd11 (ENSCGRG00001006458) #23	Taf5 (ENSCGRG00001008015) #25	ENSCGRG00001009088 #24	Pcgf6 (ENSCGRG00001007808) #26	Ina (ENSCGRG00001017461) #27	Nt5c2 (ENSCGRG00001021778) #29	Cnnm2 (ENSCGRG00001022341) #30	As3mt (ENSCGRG00001009254) #31	Borcs7 (ENSCGRG00001018546) #32	Cyp17a1 (ENSCGRG00001019418) #33	ENSCGRG00001012898 #34	Sfxn2 (ENSCGRG00001018053) #35	Arl3 (ENSCGRG00001020323) #36
Murinae	ANCESTRAL SPECIES		ENSGT00940000157716	ENSGT00390000015440.a	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Rat	MODERN SPECIES		ENSRNOG00000068067	Ins1 (ENSRNOG00000012052)	Sorcs1 (ENSRNOG00000011313) #7	Sorcs3 (ENSRNOG00000028832) #8	Cfap58 (ENSRNOG00000049596) #9	Itprip (ENSRNOG00000046036) #10	Gsto2 (ENSRNOG00000069697) #11	Gsto1 (ENSRNOG00000028746) #12	Cfap43 (ENSRNOG00000036585) #13	Sfr1 (ENSRNOG00000012641) #14	Col17a1 (ENSRNOG00000012110) #15	Slk (ENSRNOG00000011339) #16	Stn1 (ENSRNOG00000020376) #17	Sh3pxd2a (ENSRNOG00000020353) #18	Neurl1 (ENSRNOG00000020339) #19	Calhm3 (ENSRNOG00000026086) #20	Calhm1 (ENSRNOG00000030682) #21	Calhm2 (ENSRNOG00000020325) #22	Pdcd11 (ENSRNOG00000020304) #23	Atp5mk (ENSRNOG00000020296) #24	Taf5 (ENSRNOG00000020274) #25	Pcgf6 (ENSRNOG00000020250) #26	Ina (ENSRNOG00000020248) #27	Nt5c2 (ENSRNOG00000020179) #29	Cnnm2 (ENSRNOG00000020113) #30	As3mt (ENSRNOG00000020081) #31	Borcs7 (ENSRNOG00000020076) #32	Cyp17a1 (ENSRNOG00000020035) #33	Wbp1l (ENSRNOG00000020020) #34	Sfxn2 (ENSRNOG00000066618) #35	Arl3 (ENSRNOG00000019973) #36
Mus	ANCESTRAL SPECIES		ENSGT00390000015440.a	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Shrew mouse	MODERN SPECIES		Xpnpep1 (MGP_PahariEiJ_G0014558)	Ins1 (MGP_PahariEiJ_G0014557)	Sorcs1 (MGP_PahariEiJ_G0014556) #7	Sorcs3 (MGP_PahariEiJ_G0014555) #8	Cfap58 (MGP_PahariEiJ_G0014554) #9	MGP_PahariEiJ_G0014553 #11	Gsto1 (MGP_PahariEiJ_G0014552) #12	Cfap43 (MGP_PahariEiJ_G0014551) #13	Sfr1 (MGP_PahariEiJ_G0014550) #14	Col17a1 (MGP_PahariEiJ_G0014549) #15	Slk (MGP_PahariEiJ_G0014548) #16	Stn1 (MGP_PahariEiJ_G0014547) #17	Sh3pxd2a (MGP_PahariEiJ_G0014546) #18	Neurl1a (MGP_PahariEiJ_G0014545) #19	MGP_PahariEiJ_G0014544	Calhm3 (MGP_PahariEiJ_G0014543) #20	Calhm1 (MGP_PahariEiJ_G0014542) #21	Calhm2 (MGP_PahariEiJ_G0014541) #22	Pdcd11 (MGP_PahariEiJ_G0014540) #23	Taf5 (MGP_PahariEiJ_G0014539) #25	Pcgf6 (MGP_PahariEiJ_G0014538) #26	Ina (MGP_PahariEiJ_G0014537) #27	Cnnm2 (MGP_PahariEiJ_G0014535) #30	As3mt (MGP_PahariEiJ_G0014534) #31	Borcs7 (MGP_PahariEiJ_G0014533) #32	Cyp17a1 (MGP_PahariEiJ_G0014532) #33	Wbp1l (MGP_PahariEiJ_G0014531) #34	Sfxn2 (MGP_PahariEiJ_G0014530) #35	Arl3 (MGP_PahariEiJ_G0014529) #36	Trim8 (MGP_PahariEiJ_G0014528) #37	Sufu (MGP_PahariEiJ_G0014527)
Mus_A	ANCESTRAL SPECIES	16	ENSGT00390000015440.a	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Ryukyu mouse	MODERN SPECIES	10	Xpnpep1 (MGP_CAROLIEiJ_G0023068)	Ins1 (MGP_CAROLIEiJ_G0023067)	Sorcs1 (MGP_CAROLIEiJ_G0023066) #7	Sorcs3 (MGP_CAROLIEiJ_G0023065) #8	Cfap58 (MGP_CAROLIEiJ_G0023064) #9	Gsto2 (MGP_CAROLIEiJ_G0023063) #11	Gsto1 (MGP_CAROLIEiJ_G0023062) #12	Itprip (MGP_CAROLIEiJ_G0023061) #10	Sfr1 (MGP_CAROLIEiJ_G0023060) #14	Col17a1 (MGP_CAROLIEiJ_G0023059) #15	Slk (MGP_CAROLIEiJ_G0023058) #16	Stn1 (MGP_CAROLIEiJ_G0023057) #17	Sh3pxd2a (MGP_CAROLIEiJ_G0023056) #18	Neurl1a (MGP_CAROLIEiJ_G0023055) #19	MGP_CAROLIEiJ_G0023054	Calhm3 (MGP_CAROLIEiJ_G0023053) #20	Calhm1 (MGP_CAROLIEiJ_G0023052) #21	Calhm2 (MGP_CAROLIEiJ_G0023051) #22	Pdcd11 (MGP_CAROLIEiJ_G0023050) #23	Taf5 (MGP_CAROLIEiJ_G0023049) #25	Pcgf6 (MGP_CAROLIEiJ_G0023048) #26	Ina (MGP_CAROLIEiJ_G0023047) #27	Nt5c2 (MGP_CAROLIEiJ_G0023046) #29	Cnnm2 (MGP_CAROLIEiJ_G0023045) #30	As3mt (MGP_CAROLIEiJ_G0023044) #31	Borcs7 (MGP_CAROLIEiJ_G0023043) #32	MGP_CAROLIEiJ_G0023042 #33	Wbp1l (MGP_CAROLIEiJ_G0023041) #34	Sfxn2 (MGP_CAROLIEiJ_G0023040) #35	Arl3 (MGP_CAROLIEiJ_G0023039) #36	Trim8 (MGP_CAROLIEiJ_G0023038) #37
Mus_B	ANCESTRAL SPECIES	16	ENSGT00390000015440.a	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Mouse	MODERN SPECIES	10	Xpnpep1 (ENSMUSG00000025027)	Ins1 (ENSMUSG00000035804)	Sorcs1 (ENSMUSG00000043531) #7	Sorcs3 (ENSMUSG00000063434) #8	Cfap58 (ENSMUSG00000046585) #9	Itprip (ENSMUSG00000117975) #10	Gsto2 (ENSMUSG00000025069) #11	Gsto1 (ENSMUSG00000025068) #12	Cfap43 (ENSMUSG00000044948) #13	Sfr1 (ENSMUSG00000025066) #14	Col17a1 (ENSMUSG00000025064) #15	Slk (ENSMUSG00000025060) #16	Stn1 (ENSMUSG00000042694) #17	Sh3pxd2a (ENSMUSG00000053617) #18	Neurl1a (ENSMUSG00000006435) #19	Calhm3 (ENSMUSG00000094219) #20	Calhm1 (ENSMUSG00000079258) #21	Calhm2 (ENSMUSG00000033033) #22	Pdcd11 (ENSMUSG00000025047) #23	Atp5md (ENSMUSG00000071528) #24	Taf5 (ENSMUSG00000025049) #25	Pcgf6 (ENSMUSG00000025050) #26	Ina (ENSMUSG00000034336) #27	Nt5c2 (ENSMUSG00000025041) #29	Cnnm2 (ENSMUSG00000064105) #30	As3mt (ENSMUSG00000003559) #31	Borcs7 (ENSMUSG00000062376) #32	Cyp17a1 (ENSMUSG00000003555) #33	Wbp1l (ENSMUSG00000047731) #34	Sfxn2 (ENSMUSG00000025036) #35	Arl3 (ENSMUSG00000025035) #36
Mus_C	ANCESTRAL SPECIES	24	ENSGT00390000015440.a	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT00940000162950.c	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Steppe mouse	MODERN SPECIES	3428	Sorcs1 (ENSMSIG00000031372) #7	ENSMSIG00000031421	Sorcs3 (ENSMSIG00000031425) #8	Cfap58 (ENSMSIG00000031428) #9	Itprip (ENSMSIG00000031430) #10	Gsto2 (ENSMSIG00000031431) #11	Gsto1 (ENSMSIG00000031433) #12	Cfap43 (ENSMSIG00000031434) #13	Sfr1 (ENSMSIG00000031436) #14	Col17a1 (ENSMSIG00000031440) #15	Slk (ENSMSIG00000031453) #16	Stn1 (ENSMSIG00000031463) #17	Sh3pxd2a (ENSMSIG00000031465) #18	Neurl1a (ENSMSIG00000031466) #19	ENSMSIG00000031470	Calhm3 (ENSMSIG00000031471) #20	Calhm1 (ENSMSIG00000031472) #21	Calhm2 (ENSMSIG00000031473) #22	Pdcd11 (ENSMSIG00000031474) #23	ENSMSIG00000031479 #24	Taf5 (ENSMSIG00000031481) #25	Pcgf6 (ENSMSIG00000031488) #26	Ina (ENSMSIG00000031490) #27	Nt5c2 (ENSMSIG00000031492) #29	Cnnm2 (ENSMSIG00000031498) #30	As3mt (ENSMSIG00000031511) #31	ENSMSIG00000031515
spretus	MODERN SPECIES	10	Xpnpep1 (MGP_SPRETEiJ_G0023989)	Ins1 (MGP_SPRETEiJ_G0023988)	Sorcs1 (MGP_SPRETEiJ_G0023987) #7	Sorcs3 (MGP_SPRETEiJ_G0023986) #8	Cfap58 (MGP_SPRETEiJ_G0023985) #9	Gsto2 (MGP_SPRETEiJ_G0023984) #11	Gsto1 (MGP_SPRETEiJ_G0023983) #12	Cfap43 (MGP_SPRETEiJ_G0023982) #13	Sfr1 (MGP_SPRETEiJ_G0023981) #14	Col17a1 (MGP_SPRETEiJ_G0023980) #15	Slk (MGP_SPRETEiJ_G0023979) #16	Stn1 (MGP_SPRETEiJ_G0023978) #17	Sh3pxd2a (MGP_SPRETEiJ_G0023977) #18	Neurl1a (MGP_SPRETEiJ_G0023976) #19	MGP_SPRETEiJ_G0023975	MGP_SPRETEiJ_G0023974 #20	Calhm1 (MGP_SPRETEiJ_G0023973) #21	Calhm2 (MGP_SPRETEiJ_G0023972) #22	Pdcd11 (MGP_SPRETEiJ_G0023971) #23	Taf5 (MGP_SPRETEiJ_G0023970) #25	Pcgf6 (MGP_SPRETEiJ_G0023969) #26	Ina (MGP_SPRETEiJ_G0023968) #27	Nt5c2 (MGP_SPRETEiJ_G0023967) #29	Cnnm2 (MGP_SPRETEiJ_G0023966) #30	As3mt (MGP_SPRETEiJ_G0023965) #31	Borcs7 (MGP_SPRETEiJ_G0023964) #32	Cyp17a1 (MGP_SPRETEiJ_G0023963) #33	Wbp1l (MGP_SPRETEiJ_G0023962) #34	Sfxn2 (MGP_SPRETEiJ_G0023961) #35	Arl3 (MGP_SPRETEiJ_G0023960) #36	Trim8 (MGP_SPRETEiJ_G0023959) #37
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Sciuridae	ANCESTRAL SPECIES	21	ENSGT00940000157716	ENSGT00950000182960.a.a.a.b.eb	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Marmotini	ANCESTRAL SPECIES	16	ENSGT00940000157716	ENSGT00950000182960.a.a.a.b.eb	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Marmotini_b	ANCESTRAL SPECIES	76				ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Arctic ground squirrel	MODERN SPECIES	239				SORCS3 (ENSUPAG00010020130) #8	CFAP58 (ENSUPAG00010020153) #9	ITPRIP (ENSUPAG00010020162) #10	GSTO2 (ENSUPAG00010020166) #11	GSTO1 (ENSUPAG00010020173) #12	ENSUPAG00010020178 #13	SFR1 (ENSUPAG00010020181) #14	COL17A1 (ENSUPAG00010020186) #15	SLK (ENSUPAG00010020310) #16	STN1 (ENSUPAG00010020348) #17	SH3PXD2A (ENSUPAG00010020358) #18	NEURL1 (ENSUPAG00010020402) #19	CALHM3 (ENSUPAG00010020411) #20	CALHM1 (ENSUPAG00010020414) #21	CALHM2 (ENSUPAG00010020415) #22	PDCD11 (ENSUPAG00010020419) #23	ATP5MK (ENSUPAG00010020448) #24	TAF5 (ENSUPAG00010020451) #25	PCGF6 (ENSUPAG00010020458) #26	INA (ENSUPAG00010020463) #27	NT5C2 (ENSUPAG00010020468) #29	CNNM2 (ENSUPAG00010020490) #30	AS3MT (ENSUPAG00010020500) #31	BORCS7 (ENSUPAG00010020508) #32	CYP17A1 (ENSUPAG00010020514) #33	WBP1L (ENSUPAG00010020520) #34	SFXN2 (ENSUPAG00010020522) #35	ARL3 (ENSUPAG00010020532) #36
Squirrel	MODERN SPECIES	200				SORCS3 (ENSSTOG00000015559) #8	CFAP58 (ENSSTOG00000004618) #9	ITPRIP (ENSSTOG00000020489) #10	GSTO2 (ENSSTOG00000013405) #11	GSTO1 (ENSSTOG00000013401) #12	ENSSTOG00000013381 #13	SFR1 (ENSSTOG00000013376) #14	COL17A1 (ENSSTOG00000013352) #15	SLK (ENSSTOG00000013329) #16	STN1 (ENSSTOG00000011905) #17	SH3PXD2A (ENSSTOG00000007057) #18	NEURL1 (ENSSTOG00000023895) #19	CALHM3 (ENSSTOG00000025172) #20	CALHM1 (ENSSTOG00000014605) #21	CALHM2 (ENSSTOG00000014597) #22	PDCD11 (ENSSTOG00000014553) #23	ATP5MK (ENSSTOG00000029901) #24	TAF5 (ENSSTOG00000014536) #25	PCGF6 (ENSSTOG00000014511) #26	INA (ENSSTOG00000026141) #27	ENSSTOG00000012380	CNNM2 (ENSSTOG00000014497) #30	AS3MT (ENSSTOG00000014490) #31	BORCS7 (ENSSTOG00000019613) #32	CYP17A1 (ENSSTOG00000014469) #33	ENSSTOG00000026185 #34	SFXN2 (ENSSTOG00000014456) #35	ARL3 (ENSSTOG00000014453) #36
Alpin marmot	MODERN SPECIES	39	ENSMMMG00000001588	SORCS1 (ENSMMMG00000001325) #7	SORCS3 (ENSMMMG00000001241) #8	CFAP58 (ENSMMMG00000001204) #9	ITPRIP (ENSMMMG00000001191) #10	GSTO2 (ENSMMMG00000001167) #11	GSTO1 (ENSMMMG00000001145) #12	ENSMMMG00000001103	CFAP43 (ENSMMMG00000000749) #13	SFR1 (ENSMMMG00000000727) #14	COL17A1 (ENSMMMG00000000492) #15	SLK (ENSMMMG00000000361) #16	STN1 (ENSMMMG00000000299) #17	SH3PXD2A (ENSMMMG00000000203) #18	NEURL1 (ENSMMMG00000000158) #19	CALHM3 (ENSMMMG00000000131) #20	CALHM1 (ENSMMMG00000000112) #21	CALHM2 (ENSMMMG00000000103) #22	PDCD11 (ENSMMMG00000000038) #23	ENSMMMG00000023417 #24	TAF5 (ENSMMMG00000023414) #25	ENSMMMG00000023410 #26	INA (ENSMMMG00000023409) #27	NT5C2 (ENSMMMG00000023399) #29	CNNM2 (ENSMMMG00000023389) #30	AS3MT (ENSMMMG00000023383) #31	BORCS7 (ENSMMMG00000023381) #32	CYP17A1 (ENSMMMG00000023378) #33	ENSMMMG00000023372 #34	SFXN2 (ENSMMMG00000023370) #35	ENSMMMG00000023361 #36
Eurasian red squirrel	MODERN SPECIES	13	ENSSVLG00005001815	XPNPEP1 (ENSSVLG00005001845)	ENSSVLG00005001899	ENSSVLG00005001943	SORCS1 (ENSSVLG00005002050) #7	SORCS3 (ENSSVLG00005002348) #8	CFAP58 (ENSSVLG00005002434) #9	ITPRIP (ENSSVLG00005002474) #10	CFAP43 (ENSSVLG00005002510) #13	ENSSVLG00005002622 #14	COL17A1 (ENSSVLG00005002694) #15	SLK (ENSSVLG00005002929) #16	STN1 (ENSSVLG00005002979) #17	ENSSVLG00005003038 #18	NEURL1 (ENSSVLG00005003109) #19	CALHM3 (ENSSVLG00005003127) #20	CALHM1 (ENSSVLG00005003146) #21	CALHM2 (ENSSVLG00005003154) #22	PDCD11 (ENSSVLG00005003201) #23	ENSSVLG00005003328	ENSSVLG00005003341 #24	TAF5 (ENSSVLG00005003365) #25	PCGF6 (ENSSVLG00005003419) #26	INA (ENSSVLG00005003457) #27	NT5C2 (ENSSVLG00005003493) #29	CNNM2 (ENSSVLG00005003556) #30	AS3MT (ENSSVLG00005003598) #31	BORCS7 (ENSSVLG00005003641) #32	CYP17A1 (ENSSVLG00005003699) #33	ENSSVLG00005003793 #34	SFXN2 (ENSSVLG00005003816) #35
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Hystricomorpha_b	ANCESTRAL SPECIES	14	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Long-tailed chinchilla	MODERN SPECIES	192	XPNPEP1 (ENSCLAG00000003091)	SORCS1 (ENSCLAG00000003479) #7	SORCS3 (ENSCLAG00000001473) #8	CFAP58 (ENSCLAG00000001586) #9	ITPRIP (ENSCLAG00000001636) #10	GSTO2 (ENSCLAG00000001887) #11	GSTO1 (ENSCLAG00000001308) #12	ENSCLAG00000017434	CFAP43 (ENSCLAG00000001343) #13	SFR1 (ENSCLAG00000001521) #14	ENSCLAG00000001543	SLK (ENSCLAG00000001596) #16	STN1 (ENSCLAG00000001617) #17	SH3PXD2A (ENSCLAG00000001679) #18	ENSCLAG00000001821 #19	CALHM3 (ENSCLAG00000001834) #20	CALHM1 (ENSCLAG00000001842) #21	CALHM2 (ENSCLAG00000001846) #22	PDCD11 (ENSCLAG00000001029) #23	ATP5MK (ENSCLAG00000001049) #24	TAF5 (ENSCLAG00000001063) #25	PCGF6 (ENSCLAG00000001188) #26	ENSCLAG00000001199 #27	NT5C2 (ENSCLAG00000001259) #29	ENSCLAG00000017436	CNNM2 (ENSCLAG00000001443) #30	AS3MT (ENSCLAG00000001482) #31	BORCS7 (ENSCLAG00000001557) #32	CYP17A1 (ENSCLAG00000000920) #33	WBP1L (ENSCLAG00000000978) #34	SFXN2 (ENSCLAG00000001037) #35
Degu	MODERN SPECIES	83	ENSODEG00000008470	ENSODEG00000007723	SORCS1 (ENSODEG00000008187) #7	SORCS3 (ENSODEG00000009208) #8	CFAP58 (ENSODEG00000011571) #9	GSTO2 (ENSODEG00000007911) #11	GSTO1 (ENSODEG00000011067) #12	ENSODEG00000019763	CFAP43 (ENSODEG00000009391) #13	COL17A1 (ENSODEG00000007918) #15	ENSODEG00000008493	SLK (ENSODEG00000008144) #16	STN1 (ENSODEG00000007270) #17	SH3PXD2A (ENSODEG00000009308) #18	NEURL1 (ENSODEG00000007869) #19	CALHM3 (ENSODEG00000007501) #20	CALHM1 (ENSODEG00000008264) #21	CALHM2 (ENSODEG00000008107) #22	PDCD11 (ENSODEG00000008079) #23	ENSODEG00000009533 #24	TAF5 (ENSODEG00000009100) #25	ENSODEG00000007978	PCGF6 (ENSODEG00000007645) #26	INA (ENSODEG00000008267) #27	NT5C2 (ENSODEG00000012028) #29	ENSODEG00000009282	CNNM2 (ENSODEG00000008114) #30	AS3MT (ENSODEG00000008429) #31	BORCS7 (ENSODEG00000009160) #32	CYP17A1 (ENSODEG00000008480) #33	ENSODEG00000008163
Guinea pig	MODERN SPECIES	11	XPNPEP1 (ENSCPOG00000006463)	ENSCPOG00000040652	SORCS1 (ENSCPOG00000012755) #7	SORCS3 (ENSCPOG00000014152) #8	CFAP58 (ENSCPOG00000000492) #9	ITPRIP (ENSCPOG00000037693) #10	GSTO2 (ENSCPOG00000012825) #11	GSTO1 (ENSCPOG00000001014) #12	CFAP43 (ENSCPOG00000001007) #13	SFR1 (ENSCPOG00000001002) #14	COL17A1 (ENSCPOG00000000997) #15	SLK (ENSCPOG00000000992) #16	STN1 (ENSCPOG00000006273) #17	SH3PXD2A (ENSCPOG00000006269) #18	NEURL1 (ENSCPOG00000006578) #19	CALHM3 (ENSCPOG00000013132) #20	CALHM1 (ENSCPOG00000010968) #21	CALHM2 (ENSCPOG00000040598) #22	PDCD11 (ENSCPOG00000010957) #23	ATP5MK (ENSCPOG00000005303) #24	TAF5 (ENSCPOG00000005294) #25	PCGF6 (ENSCPOG00000004021) #26	INA (ENSCPOG00000004030) #27	NT5C2 (ENSCPOG00000015748) #29	CNNM2 (ENSCPOG00000015746) #30	BORCS7 (ENSCPOG00000032430) #32	CYP17A1 (ENSCPOG00000014546) #33	WBP1L (ENSCPOG00000033991) #34	SFXN2 (ENSCPOG00000014474) #35	ARL3 (ENSCPOG00000014473) #36	TRIM8 (ENSCPOG00000012305) #37
Naked mole-rat female	MODERN SPECIES	4	ENSHGLG00000039801	SORCS1 (ENSHGLG00000002729) #7	ENSHGLG00000039825	SORCS3 (ENSHGLG00000001754) #8	CFAP58 (ENSHGLG00000002793) #9	ITPRIP (ENSHGLG00000046163) #10	GSTO2 (ENSHGLG00000049945) #11	GSTO1 (ENSHGLG00000002485) #12	CFAP43 (ENSHGLG00000035856) #13	ENSHGLG00000033849 #14	COL17A1 (ENSHGLG00000003598) #15	SLK (ENSHGLG00000003084) #16	STN1 (ENSHGLG00000002775) #17	SH3PXD2A (ENSHGLG00000002064) #18	NEURL1 (ENSHGLG00000001530) #19	CALHM3 (ENSHGLG00000002195) #20	CALHM1 (ENSHGLG00000002126) #21	CALHM2 (ENSHGLG00000002007) #22	PDCD11 (ENSHGLG00000001462) #23	ENSHGLG00000045467	ENSHGLG00000003034	TAF5 (ENSHGLG00000002753) #25	ENSHGLG00000002539 #26	INA (ENSHGLG00000002478) #27	NT5C2 (ENSHGLG00000003370) #29	CNNM2 (ENSHGLG00000002477) #30	ENSHGLG00000037786	ENSHGLG00000037019	ENSHGLG00000036337 #32	CYP17A1 (ENSHGLG00000002087) #33	WBP1L (ENSHGLG00000036528) #34
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a.b.b #20
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	7049															ENSSARG00000000611 #22	ENSSARG00000000599 #20
Common shrew	MODERN SPECIES	7030																ENSSARG00000013675 #20	ENSSARG00000013674 #22
Hedgehog	MODERN SPECIES	4502																ENSEEUG00000010857 #20
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33
Suina	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Chacoan peccary	MODERN SPECIES	955	ADD3 (ENSCWAG00000021594)	XPNPEP1 (ENSCWAG00000021611)	SORCS1 (ENSCWAG00000021655) #7	SORCS3 (ENSCWAG00000021774) #8	CFAP58 (ENSCWAG00000021795) #9	ITPRIP (ENSCWAG00000021802) #10	GSTO2 (ENSCWAG00000021807) #11	GSTO1 (ENSCWAG00000021817) #12	CFAP43 (ENSCWAG00000021831) #13	SFR1 (ENSCWAG00000010419) #14	COL17A1 (ENSCWAG00000010502) #15	SLK (ENSCWAG00000011479) #16	STN1 (ENSCWAG00000011621) #17	SH3PXD2A (ENSCWAG00000011699) #18	NEURL1 (ENSCWAG00000011779) #19	CALHM3 (ENSCWAG00000011859) #20	CALHM1 (ENSCWAG00000011899) #21	CALHM2 (ENSCWAG00000011925) #22	PDCD11 (ENSCWAG00000011961) #23	ATP5MK (ENSCWAG00000012035) #24	TAF5 (ENSCWAG00000012095) #25	PCGF6 (ENSCWAG00000012211) #26	INA (ENSCWAG00000012252) #27	NT5C2 (ENSCWAG00000012289) #29	CNNM2 (ENSCWAG00000012366) #30	AS3MT (ENSCWAG00000012429) #31	BORCS7 (ENSCWAG00000012528) #32	ENSCWAG00000012570	CYP17A1 (ENSCWAG00000012610) #33	WBP1L (ENSCWAG00000013043) #34	ENSCWAG00000013109 #35
Pig	MODERN SPECIES	5	ENSSSCG00000046631	SORCS1 (ENSSSCG00000030026) #7	SORCS3 (ENSSSCG00000010617) #8	CFAP58 (ENSSSCG00000010614) #9	ITPRIP (ENSSSCG00000010613) #10	GSTO2 (ENSSSCG00000030271) #11	GSTO1 (ENSSSCG00000022351) #12	ENSSSCG00000010610 #12	CFAP43 (ENSSSCG00000010609) #13	SFR1 (ENSSSCG00000010608) #14	COL17A1 (ENSSSCG00000010607) #15	SLK (ENSSSCG00000010606) #16	STN1 (ENSSSCG00000010605) #17	SH3PXD2A (ENSSSCG00000010604) #18	NEURL1 (ENSSSCG00000010603) #19	CALHM3 (ENSSSCG00000034671) #20	CALHM1 (ENSSSCG00000010601) #21	CALHM2 (ENSSSCG00000010600) #22	PDCD11 (ENSSSCG00000010599) #23	ATP5MK (ENSSSCG00000032165) #24	TAF5 (ENSSSCG00000010597) #25	PCGF6 (ENSSSCG00000020954) #26	INA (ENSSSCG00000010595) #27	NT5C2 (ENSSSCG00000010594) #29	CNNM2 (ENSSSCG00000010593) #30	AS3MT (ENSSSCG00000010592) #31	BORCS7 (ENSSSCG00000038633) #32	CYP17A1 (ENSSSCG00000010591) #33	WBP1L (ENSSSCG00000029594) #34	SFXN2 (ENSSSCG00000010589) #35	ARL3 (ENSSSCG00000031782) #36
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000163289.b	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Cetacea	ANCESTRAL SPECIES	15	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m #34
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Monodontidae	ANCESTRAL SPECIES	14	ENSGT01030000234563.b.a.b.b.a #7	ENSGT00390000014084.ab.b.a	ENSGT00390000004029.k.b	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.m.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Narwhal	MODERN SPECIES	311	SORCS1 (ENSMMNG00015014476) #7	ENSMMNG00015014354	ENSMMNG00015014339	SORCS3 (ENSMMNG00015014281) #8	CFAP58 (ENSMMNG00015014243) #9	ITPRIP (ENSMMNG00015014222) #10	GSTO2 (ENSMMNG00015014209) #11	GSTO1 (ENSMMNG00015014192) #12	CFAP43 (ENSMMNG00015014169) #13	SFR1 (ENSMMNG00015014153) #14	COL17A1 (ENSMMNG00015013979) #15	SLK (ENSMMNG00015013837) #16	STN1 (ENSMMNG00015013736) #17	SH3PXD2A (ENSMMNG00015013681) #18	NEURL1 (ENSMMNG00015013659) #19	CALHM3 (ENSMMNG00015013638) #20	CALHM1 (ENSMMNG00015013618) #21	CALHM2 (ENSMMNG00015013608) #22	PDCD11 (ENSMMNG00015013562) #23	ATP5MK (ENSMMNG00015013543) #24	TAF5 (ENSMMNG00015013528) #25	PCGF6 (ENSMMNG00015013501) #26	INA (ENSMMNG00015013479) #27	ENSMMNG00015013465	CNNM2 (ENSMMNG00015013452) #30	AS3MT (ENSMMNG00015013420) #31	BORCS7 (ENSMMNG00015013396) #32	ENSMMNG00015013382	CYP17A1 (ENSMMNG00015013335) #33	ENSMMNG00015013292 #34	SFXN2 (ENSMMNG00015013273) #35
Beluga whale	MODERN SPECIES	65	SORCS1 (ENSDLEG00000012351) #7	ENSDLEG00000012486	ENSDLEG00000012496	SORCS3 (ENSDLEG00000012501) #8	CFAP58 (ENSDLEG00000012529) #9	ITPRIP (ENSDLEG00000012555) #10	GSTO2 (ENSDLEG00000012561) #11	GSTO1 (ENSDLEG00000012569) #12	CFAP43 (ENSDLEG00000012588) #13	SFR1 (ENSDLEG00000012724) #14	COL17A1 (ENSDLEG00000012764) #15	SLK (ENSDLEG00000013132) #16	STN1 (ENSDLEG00000013196) #17	SH3PXD2A (ENSDLEG00000008838) #18	NEURL1 (ENSDLEG00000008927) #19	CALHM3 (ENSDLEG00000008972) #20	CALHM1 (ENSDLEG00000009015) #21	CALHM2 (ENSDLEG00000009041) #22	PDCD11 (ENSDLEG00000009147) #23	USMG5 (ENSDLEG00000009255) #24	TAF5 (ENSDLEG00000009272) #25	PCGF6 (ENSDLEG00000009308) #26	INA (ENSDLEG00000009353) #27	NT5C2 (ENSDLEG00000009371)	CNNM2 (ENSDLEG00000009405) #30	AS3MT (ENSDLEG00000009479) #31	BORCS7 (ENSDLEG00000009520) #32	CYP17A1 (ENSDLEG00000009531) #33	SFXN2 (ENSDLEG00000009564) #35	ARL3 (ENSDLEG00000009629) #36	TRIM8 (ENSDLEG00000009697) #37
Vaquita	MODERN SPECIES	7	XPNPEP1 (ENSPSNG00000012309)	SORCS1 (ENSPSNG00000010862) #7	ENSPSNG00000020840	SORCS3 (ENSPSNG00000020579) #8	CFAP58 (ENSPSNG00000020428) #9	ITPRIP (ENSPSNG00000020395) #10	GSTO2 (ENSPSNG00000020348) #11	GSTO1 (ENSPSNG00000020286) #12	CFAP43 (ENSPSNG00000019933) #13	SFR1 (ENSPSNG00000019848) #14	COL17A1 (ENSPSNG00000019777) #15	SLK (ENSPSNG00000019646) #16	STN1 (ENSPSNG00000019572) #17	SH3PXD2A (ENSPSNG00000019335) #18	NEURL1 (ENSPSNG00000019212) #19	CALHM3 (ENSPSNG00000019156) #20	CALHM1 (ENSPSNG00000019125) #21	CALHM2 (ENSPSNG00000019092) #22	PDCD11 (ENSPSNG00000019025) #23	ENSPSNG00000018977 #24	TAF5 (ENSPSNG00000018939) #25	PCGF6 (ENSPSNG00000018827) #26	INA (ENSPSNG00000018790) #27	NT5C2 (ENSPSNG00000018760) #29	CNNM2 (ENSPSNG00000018654) #30	AS3MT (ENSPSNG00000018610) #31	BORCS7 (ENSPSNG00000018573) #32	ENSPSNG00000018533	CYP17A1 (ENSPSNG00000018242) #33	ENSPSNG00000018106 #34	SFXN2 (ENSPSNG00000018035) #35
Dolphin	MODERN SPECIES	985													STN1 (ENSTTRG00000003375) #17	SH3PXD2A (ENSTTRG00000003374) #18	NEURL1 (ENSTTRG00000003372) #19	CALHM3 (ENSTTRG00000003370) #20	CALHM1 (ENSTTRG00000003368) #21	CALHM2 (ENSTTRG00000003364) #22	PDCD11 (ENSTTRG00000003356) #23	USMG5 (ENSTTRG00000003352) #24	TAF5 (ENSTTRG00000003344) #25	PCGF6 (ENSTTRG00000003333) #26	INA (ENSTTRG00000003328) #27
Sperm whale	MODERN SPECIES	12	XPNPEP1 (ENSPCTG00005013535)	SORCS1 (ENSPCTG00005012260) #7	ENSPCTG00005012185	SORCS3 (ENSPCTG00005011635) #8	CFAP58 (ENSPCTG00005011394) #9	ITPRIP (ENSPCTG00005021291) #10	GSTO2 (ENSPCTG00005021236) #11	GSTO1 (ENSPCTG00005021211) #12	CFAP43 (ENSPCTG00005021187) #13	ENSPCTG00005021155 #14	ENSPCTG00005021112	SLK (ENSPCTG00005021059) #16	STN1 (ENSPCTG00005021023) #17	SH3PXD2A (ENSPCTG00005020967) #18	NEURL1 (ENSPCTG00005020933) #19	CALHM3 (ENSPCTG00005020902) #20	CALHM2 (ENSPCTG00005020892) #22	PDCD11 (ENSPCTG00005020873) #23	ATP5MD (ENSPCTG00005020847) #24	TAF5 (ENSPCTG00005020833) #25	PCGF6 (ENSPCTG00005020785) #26	ENSPCTG00005020775	INA (ENSPCTG00005020759) #27	NT5C2 (ENSPCTG00005020690) #29	CNNM2 (ENSPCTG00005020562) #30	AS3MT (ENSPCTG00005020508) #31	BORCS7 (ENSPCTG00005020478) #32	CYP17A1 (ENSPCTG00005020262) #33	WBP1L (ENSPCTG00005020108) #34	ARL3 (ENSPCTG00005020073) #36	GBF1 (ENSPCTG00005019758)
Pecora	ANCESTRAL SPECIES	12	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Percora_a	ANCESTRAL SPECIES	14	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT00950000183109.c.a.a.p #34	ENSGT01030000234641.b.a.a #35
Bovidae	ANCESTRAL SPECIES	24	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Caprinae	ANCESTRAL SPECIES	19	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s.a #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.g.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.p #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Goat	MODERN SPECIES	18	SORCS1 (ENSCHIG00000024779) #7	ENSCHIG00000020054	SORCS3 (ENSCHIG00000004540) #8	CFAP58 (ENSCHIG00000016727) #9	ITPRIP (ENSCHIG00000020814) #10	GSTO2 (ENSCHIG00000003139) #11	ENSCHIG00000010963 #12	CFAP43 (ENSCHIG00000019392) #13	ENSCHIG00000019373 #12	SFR1 (ENSCHIG00000020297) #14	COL17A1 (ENSCHIG00000013715) #15	SLK (ENSCHIG00000017273) #16	ENSCHIG00000019425 #17	SH3PXD2A (ENSCHIG00000012501) #18	NEURL1 (ENSCHIG00000021908) #19	CALHM3 (ENSCHIG00000019527) #20	CALHM1 (ENSCHIG00000000587) #21	CALHM2 (ENSCHIG00000014672) #22	PDCD11 (ENSCHIG00000025218) #23	ENSCHIG00000003414 #24	TAF5 (ENSCHIG00000011203) #25	PCGF6 (ENSCHIG00000011396) #26	INA (ENSCHIG00000021339) #27	NT5C2 (ENSCHIG00000016169) #29	CNNM2 (ENSCHIG00000016492) #30	AS3MT (ENSCHIG00000013994) #31	BORCS7 (ENSCHIG00000000549) #32	CYP17A1A (ENSCHIG00000015158) #33	CYP17A1B (ENSCHIG00000005308) #33	WBP1L (ENSCHIG00000016756) #34	SFXN2 (ENSCHIG00000005366) #35
Rambouillet Sheep	MODERN SPECIES	14	SORCS1 (ENSOARG00020011610) #7	SORCS3 (ENSOARG00020011044) #8	CFAP58 (ENSOARG00020010711) #9	ITPRIP (ENSOARG00020010665) #10	GSTO2 (ENSOARG00020010406) #11	ENSOARG00020010357 #12	ENSOARG00020010304 #12	CFAP43 (ENSOARG00020009695) #13	SFR1 (ENSOARG00020009619) #14	COL17A1 (ENSOARG00020009409) #15	SLK (ENSOARG00020009006) #16	STN1 (ENSOARG00020008923) #17	ENSOARG00020008903	SH3PXD2A (ENSOARG00020008650) #18	NEURL1 (ENSOARG00020008586) #19	CALHM3 (ENSOARG00020008557) #20	CALHM1 (ENSOARG00020008535) #21	CALHM2 (ENSOARG00020008493) #22	PDCD11 (ENSOARG00020008240) #23	ATP5MD (ENSOARG00020008172) #24	TAF5 (ENSOARG00020008039) #25	PCGF6 (ENSOARG00020007889) #26	INA (ENSOARG00020007851) #27	NT5C2 (ENSOARG00020007751) #29	CNNM2 (ENSOARG00020007642) #30	AS3MT (ENSOARG00020007602) #31	BORCS7 (ENSOARG00020007581) #32	CYP17A1 (ENSOARG00020007273) #33	ENSOARG00020007149 #33	ENSOARG00020007122	WBP1L (ENSOARG00020007033) #34
Bovinae	ANCESTRAL SPECIES	22	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a.o #34	ENSGT01030000234641.b.a.a #35
Bos	ANCESTRAL SPECIES	23	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33
Bos_b	ANCESTRAL SPECIES	23	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00940000155351.t #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.a.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33	ENSGT00950000183109.c.a.a.o #34
Hybrid Bos Indicus	MODERN SPECIES	18	ADD3 (ENSBIXG00005015459)	XPNPEP1 (ENSBIXG00005015192)	SORCS1 (ENSBIXG00005005587) #7	SORCS3 (ENSBIXG00005014866) #8	CFAP58 (ENSBIXG00005014662) #9	ITPRIP (ENSBIXG00005002045) #10	GSTO2 (ENSBIXG00005014610) #11	GSTO1 (ENSBIXG00005002028) #12	CFAP43 (ENSBIXG00005006740) #13	SFR1 (ENSBIXG00005014485) #14	COL17A1 (ENSBIXG00005014449) #15	SLK (ENSBIXG00005014357) #16	STN1 (ENSBIXG00005014161) #17	SH3PXD2A (ENSBIXG00005007453) #18	NEURL1 (ENSBIXG00005007451) #19	CALHM3 (ENSBIXG00005013942) #20	CALHM1 (ENSBIXG00005013926) #21	CALHM2 (ENSBIXG00005013905) #22	PDCD11 (ENSBIXG00005013880) #23	ENSBIXG00005005925 #24	TAF5 (ENSBIXG00005013813) #25	PCGF6 (ENSBIXG00005013781) #26	INA (ENSBIXG00005013717) #27	NT5C2 (ENSBIXG00005013678) #29	ENSBIXG00005013582	CNNM2 (ENSBIXG00005013565) #30	ENSBIXG00005013480	AS3MT (ENSBIXG00005013473) #31	BORCS7 (ENSBIXG00005013454) #32	ENSBIXG00005013433	ENSBIXG00005013421 #33
Cow	MODERN SPECIES	18	ENSBTAG00000050119	SORCS3 (ENSBTAG00000004612) #8	CFAP58 (ENSBTAG00000007243) #9	ITPRIP (ENSBTAG00000003990) #10	GSTO2 (ENSBTAG00000040290) #11	GSTO1 (ENSBTAG00000003989) #12	ENSBTAG00000038540 #12	CFAP43 (ENSBTAG00000014574) #13	SFR1 (ENSBTAG00000047450) #14	COL17A1 (ENSBTAG00000002430) #15	SLK (ENSBTAG00000001017) #16	STN1 (ENSBTAG00000015019) #17	ENSBTAG00000048488 #18	SH3PXD2A (ENSBTAG00000044153) #18	NEURL1 (ENSBTAG00000003741) #19	CALHM3 (ENSBTAG00000032761) #20	CALHM1 (ENSBTAG00000007044) #21	CALHM2 (ENSBTAG00000009719) #22	PDCD11 (ENSBTAG00000009715) #23	ATP5MK (ENSBTAG00000009713) #24	TAF5 (ENSBTAG00000009709) #25	PCGF6 (ENSBTAG00000009879) #26	INA (ENSBTAG00000002717) #27	NT5C2 (ENSBTAG00000012858) #29	CNNM2 (ENSBTAG00000012857) #30	ENSBTAG00000054629	ENSBTAG00000053360	AS3MT (ENSBTAG00000036127) #31	ENSBTAG00000053826 #32	CYP17A1 (ENSBTAG00000014335) #33	ENSBTAG00000054516 #33
Bos_a	ANCESTRAL SPECIES	17	ENSGT00940000153412.A.a.c.b.a	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351.s #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732.b #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.h.b.b #24	ENSGT00390000015489.h.b.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000163315	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b.p #33	ENSGT00940000155588.b.o #33
Wild yak	MODERN SPECIES	124													STN1 (ENSBMUG00000000696) #17	SH3PXD2A (ENSBMUG00000000732) #18	NEURL1 (ENSBMUG00000000765) #19	CALHM3 (ENSBMUG00000000783) #20	CALHM1 (ENSBMUG00000000792) #21	CALHM2 (ENSBMUG00000000810) #22	PDCD11 (ENSBMUG00000000897) #23	ENSBMUG00000000948 #24	TAF5 (ENSBMUG00000000970) #25	PCGF6 (ENSBMUG00000000995) #26	INA (ENSBMUG00000001016) #27	NT5C2 (ENSBMUG00000001069) #29	ENSBMUG00000001099	CNNM2 (ENSBMUG00000001127) #30	AS3MT (ENSBMUG00000001150) #31	BORCS7 (ENSBMUG00000001161) #32	ENSBMUG00000001210 #33	ENSBMUG00000001320 #33	WBP1L (ENSBMUG00000001345) #34
Domestic yak	MODERN SPECIES	17	ENSBGRG00000013977	SORCS3 (ENSBGRG00000013420) #8	CFAP58 (ENSBGRG00000013270) #9	ITPRIP (ENSBGRG00000013250) #10	GSTO2 (ENSBGRG00000013033) #11	ENSBGRG00000012997	GSTO1 (ENSBGRG00000012710) #12	ENSBGRG00000012602 #13	ENSBGRG00000012536 #13	SFR1 (ENSBGRG00000012483) #14	COL17A1 (ENSBGRG00000010903) #15	SLK (ENSBGRG00000010186) #16	STN1 (ENSBGRG00000010099) #17	SH3PXD2A (ENSBGRG00000009950) #18	NEURL1 (ENSBGRG00000009848) #19	CALHM3 (ENSBGRG00000009815) #20	CALHM1 (ENSBGRG00000009787) #21	CALHM2 (ENSBGRG00000009752) #22	PDCD11 (ENSBGRG00000009626) #23	ENSBGRG00000009559 #24	ENSBGRG00000009527 #24	TAF5 (ENSBGRG00000009421) #25	PCGF6 (ENSBGRG00000009240) #26	INA (ENSBGRG00000009201) #27	ENSBGRG00000009166	NT5C2 (ENSBGRG00000008985) #29	CNNM2 (ENSBGRG00000008807) #30	AS3MT (ENSBGRG00000008703) #31	BORCS7 (ENSBGRG00000008664) #32	ENSBGRG00000008565 #33	ENSBGRG00000008360 #33
American bison	MODERN SPECIES	3316	XPNPEP1 (ENSBBBG00000024051)	SORCS1 (ENSBBBG00000023913) #7	SORCS3 (ENSBBBG00000023649) #8	CFAP58 (ENSBBBG00000006154) #9	ITPRIP (ENSBBBG00000023524) #10	GSTO2 (ENSBBBG00000023515) #11	ENSBBBG00000008631 #12	ENSBBBG00000023450 #12	CFAP43 (ENSBBBG00000023436) #13	SFR1 (ENSBBBG00000023370) #14	COL17A1 (ENSBBBG00000006107) #15	SLK (ENSBBBG00000006071) #16	STN1 (ENSBBBG00000023099) #17	SH3PXD2A (ENSBBBG00000022954) #18	NEURL1 (ENSBBBG00000022879) #19	CALHM3 (ENSBBBG00000022873) #20	CALHM1 (ENSBBBG00000022866) #21	CALHM2 (ENSBBBG00000022855) #22	PDCD11 (ENSBBBG00000022849) #23	ENSBBBG00000022765 #24	TAF5 (ENSBBBG00000005985) #25	PCGF6 (ENSBBBG00000022739) #26	INA (ENSBBBG00000022709) #27	NT5C2 (ENSBBBG00000022699) #29	ENSBBBG00000022663	CNNM2 (ENSBBBG00000005962) #30	AS3MT (ENSBBBG00000022602) #31	BORCS7 (ENSBBBG00000022589) #32	CYP17A1 (ENSBBBG00000022580) #33	WBP1L (ENSBBBG00000022572) #34	SFXN2 (ENSBBBG00000022549) #35
Siberian musk deer	MODERN SPECIES	1162	ADD3 (ENSMMSG00000021722)	XPNPEP1 (ENSMMSG00000021829)	SORCS1 (ENSMMSG00000021947) #7	SORCS3 (ENSMMSG00000022440) #8	CFAP58 (ENSMMSG00000022547) #9	ITPRIP (ENSMMSG00000022580) #10	GSTO2 (ENSMMSG00000022589) #11	GSTO1 (ENSMMSG00000022646) #12	CFAP43 (ENSMMSG00000022726) #13	SFR1 (ENSMMSG00000022773) #14	COL17A1 (ENSMMSG00000022824) #15	SLK (ENSMMSG00000023006) #16	STN1 (ENSMMSG00000023042) #17	SH3PXD2A (ENSMMSG00000023055) #18	NEURL1 (ENSMMSG00000023079) #19	CALHM3 (ENSMMSG00000023099) #20	CALHM1 (ENSMMSG00000023103) #21	CALHM2 (ENSMMSG00000023108) #22	PDCD11 (ENSMMSG00000023119) #23	ENSMMSG00000023134 #24	TAF5 (ENSMMSG00000023138) #25	ENSMMSG00000023151 #26	INA (ENSMMSG00000023173) #27	ENSMMSG00000023189	ENSMMSG00000023210	CNNM2 (ENSMMSG00000023218) #30	ENSMMSG00000023266 #31	BORCS7 (ENSMMSG00000023301) #32	CYP17A1 (ENSMMSG00000023330) #33	WBP1L (ENSMMSG00000023437) #34	SFXN2 (ENSMMSG00000023456) #35
Yarkand deer	MODERN SPECIES	6	SORCS1 (ENSCHYG00000007158) #7	ENSCHYG00000007117	SORCS3 (ENSCHYG00000006900) #8	CFAP58 (ENSCHYG00000006776) #9	ITPRIP (ENSCHYG00000006759) #10	ENSCHYG00000006740	GSTO2 (ENSCHYG00000006622) #11	GSTO1 (ENSCHYG00000006501) #12	CFAP43 (ENSCHYG00000006430) #13	SFR1 (ENSCHYG00000006389) #14	COL17A1 (ENSCHYG00000005902) #15	SLK (ENSCHYG00000005694) #16	STN1 (ENSCHYG00000005613) #17	SH3PXD2A (ENSCHYG00000005529) #18	NEURL1 (ENSCHYG00000005486) #19	CALHM3 (ENSCHYG00000005447) #20	CALHM1 (ENSCHYG00000005428) #21	CALHM2 (ENSCHYG00000005405) #22	PDCD11 (ENSCHYG00000005348) #23	ENSCHYG00000005295 #24	TAF5 (ENSCHYG00000005235) #25	PCGF6 (ENSCHYG00000005140) #26	ENSCHYG00000016674	INA (ENSCHYG00000016625) #27	NT5C2 (ENSCHYG00000016134) #29	CNNM2 (ENSCHYG00000015538) #30	AS3MT (ENSCHYG00000015224) #31	BORCS7 (ENSCHYG00000015118) #32	ENSCHYG00000015093	WBP1L (ENSCHYG00000014950) #34	SFXN2 (ENSCHYG00000014532) #35
Camelidae	ANCESTRAL SPECIES	4	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Arabian camel	MODERN SPECIES	2	ADD3 (ENSCDRG00005006153)	XPNPEP1 (ENSCDRG00005006270)	SORCS1 (ENSCDRG00005006479) #7	SORCS3 (ENSCDRG00005007469) #8	CFAP58 (ENSCDRG00005008105) #9	ITPRIP (ENSCDRG00005008196) #10	GSTO2 (ENSCDRG00005008226) #11	GSTO1 (ENSCDRG00005008349) #12	CFAP43 (ENSCDRG00005008504) #13	SFR1 (ENSCDRG00005008585) #14	COL17A1 (ENSCDRG00005008684) #15	SLK (ENSCDRG00005010331) #16	STN1 (ENSCDRG00005010608) #17	SH3PXD2A (ENSCDRG00005010700) #18	NEURL1 (ENSCDRG00005010923) #19	CALHM3 (ENSCDRG00005011030) #20	CALHM1 (ENSCDRG00005011070) #21	CALHM2 (ENSCDRG00005011123) #22	PDCD11 (ENSCDRG00005011201) #23	ENSCDRG00005011960 #24	TAF5 (ENSCDRG00005011985) #25	PCGF6 (ENSCDRG00005012063) #26	INA (ENSCDRG00005012311) #27	NT5C2 (ENSCDRG00005012355) #29	CNNM2 (ENSCDRG00005012708) #30	AS3MT (ENSCDRG00005012899) #31	BORCS7 (ENSCDRG00005013001) #32	CYP17A1 (ENSCDRG00005013042) #33	WBP1L (ENSCDRG00005013170) #34	SFXN2 (ENSCDRG00005013237) #35	ARL3 (ENSCDRG00005013316) #36
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Carnivora	ANCESTRAL SPECIES	16	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Caniformia	ANCESTRAL SPECIES	13	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34
Ursus	ANCESTRAL SPECIES	7	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.r #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
American black bear	MODERN SPECIES	2564														SH3PXD2A (ENSUAMG00000018116) #18	NEURL1 (ENSUAMG00000018115) #19	CALHM3 (ENSUAMG00000018114) #20	CALHM1 (ENSUAMG00000018113) #21	CALHM2 (ENSUAMG00000018112) #22	PDCD11 (ENSUAMG00000018015) #23	ATP5MK (ENSUAMG00000018005) #24
Polar bear	MODERN SPECIES	92	ADD3 (ENSUMAG00000023714)	XPNPEP1 (ENSUMAG00000023709)	SORCS1 (ENSUMAG00000023682) #7	SORCS3 (ENSUMAG00000023676) #8	ENSUMAG00000023674	CFAP58 (ENSUMAG00000023672) #9	ITPRIP (ENSUMAG00000023671) #10	GSTO2 (ENSUMAG00000023665) #11	GSTO1 (ENSUMAG00000023662) #12	CFAP43 (ENSUMAG00000023657) #13	SFR1 (ENSUMAG00000023655) #14	ENSUMAG00000023654	SLK (ENSUMAG00000023651) #16	STN1 (ENSUMAG00000023647) #17	SH3PXD2A (ENSUMAG00000023643) #18	CALHM3 (ENSUMAG00000023638) #20	CALHM1 (ENSUMAG00000023637) #21	CALHM2 (ENSUMAG00000023635) #22	PDCD11 (ENSUMAG00000023567) #23	ATP5MK (ENSUMAG00000023547) #24	TAF5 (ENSUMAG00000023531) #25	ENSUMAG00000023524 #26	ENSUMAG00000023523	ENSUMAG00000023521 #27	ENSUMAG00000023519	CNNM2 (ENSUMAG00000023515) #30	AS3MT (ENSUMAG00000023512) #31	BORCS7 (ENSUMAG00000023510) #32	CYP17A1 (ENSUMAG00000023508) #33	WBP1L (ENSUMAG00000023506) #34	SFXN2 (ENSUMAG00000023501) #35
Giant Panda	MODERN SPECIES	16	ENSAMEG00000025030	SORCS1 (ENSAMEG00000008455) #7	ENSAMEG00000028476	ENSAMEG00000018052 #8	CFAP58 (ENSAMEG00000018045) #9	ITPRIP (ENSAMEG00000020225) #10	ENSAMEG00000018041 #11	GSTO1 (ENSAMEG00000018030) #12	CFAP43 (ENSAMEG00000018011) #13	SFR1 (ENSAMEG00000018007) #14	ENSAMEG00000017991	SLK (ENSAMEG00000017981) #16	STN1 (ENSAMEG00000017971) #17	SH3PXD2A (ENSAMEG00000017966) #18	NEURL1 (ENSAMEG00000017960) #19	CALHM3 (ENSAMEG00000017958) #20	CALHM1 (ENSAMEG00000017956) #21	CALHM2 (ENSAMEG00000030260) #22	PDCD11 (ENSAMEG00000017935) #23	ATP5MK (ENSAMEG00000017934) #24	TAF5 (ENSAMEG00000017926) #25	PCGF6 (ENSAMEG00000017916) #26	INA (ENSAMEG00000023491) #27	NT5C2 (ENSAMEG00000017886) #29	CNNM2 (ENSAMEG00000017864) #30	BORCS7 (ENSAMEG00000017863) #32	CYP17A1 (ENSAMEG00000017838) #33	WBP1L (ENSAMEG00000030900) #34	SFXN2 (ENSAMEG00000017821) #35	ENSAMEG00000017816 #36	TRIM8 (ENSAMEG00000017812) #37
Mustelinae	ANCESTRAL SPECIES	29				ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
American mink	MODERN SPECIES	25			ENSNVIG00000015792	SORCS3 (ENSNVIG00000015831) #8	CFAP58 (ENSNVIG00000015885) #9	ITPRIP (ENSNVIG00000015925) #10	GSTO2 (ENSNVIG00000015938) #11	ENSNVIG00000015962 #12	CFAP43 (ENSNVIG00000016002) #13	SFR1 (ENSNVIG00000016083) #14	F5H0Q7 (ENSNVIG00000016116) #15	SLK (ENSNVIG00000016502) #16	STN1 (ENSNVIG00000016545) #17	SH3PXD2A (ENSNVIG00000016596) #18	NEURL1 (ENSNVIG00000016689) #19	CALHM3 (ENSNVIG00000016714) #20	CALHM1 (ENSNVIG00000016736) #21	CALHM2 (ENSNVIG00000016743) #22	PDCD11 (ENSNVIG00000016762) #23	ENSNVIG00000016873 #24	TAF5 (ENSNVIG00000016891) #25	PCGF6 (ENSNVIG00000016935) #26	INA (ENSNVIG00000016984) #27	NT5C2 (ENSNVIG00000016994) #29	CNNM2 (ENSNVIG00000017046) #30	ENSNVIG00000017111	BORCS7 (ENSNVIG00000017120) #32	CYP17A1 (ENSNVIG00000017144) #33	WBP1L (ENSNVIG00000017241) #34	SFXN2 (ENSNVIG00000017262) #35	ARL3 (ENSNVIG00000017289) #36
Ferret	MODERN SPECIES	187	SORCS3 (ENSMPUG00000016790) #8	CFAP58 (ENSMPUG00000016791) #9	ITPRIP (ENSMPUG00000020132) #10	GSTO2 (ENSMPUG00000016792) #11	GSTO1 (ENSMPUG00000016794) #12	CFAP43 (ENSMPUG00000016795) #13	SFR1 (ENSMPUG00000016796) #14	ENSMPUG00000016797	COL17A1 (ENSMPUG00000016798) #15	SLK (ENSMPUG00000016799) #16	STN1 (ENSMPUG00000016800) #17	ENSMPUG00000016805	SH3PXD2A (ENSMPUG00000016820) #18	NEURL1 (ENSMPUG00000016821) #19	ENSMPUG00000016822	CALHM3 (ENSMPUG00000016824) #20	CALHM2 (ENSMPUG00000016826) #22	PDCD11 (ENSMPUG00000016829) #23	TAF5 (ENSMPUG00000016831) #25	PCGF6 (ENSMPUG00000016842) #26	INA (ENSMPUG00000016844) #27	NT5C2 (ENSMPUG00000016845) #29	CNNM2 (ENSMPUG00000016848) #30	AS3MT (ENSMPUG00000016851) #31	BORCS7 (ENSMPUG00000016858) #32	CYP17A1 (ENSMPUG00000016860) #33	WBP1L (ENSMPUG00000016861) #34	SFXN2 (ENSMPUG00000016862) #35	ARL3 (ENSMPUG00000016864) #36	TRIM8 (ENSMPUG00000016866) #37	SUFU (ENSMPUG00000016867)
Canidae	ANCESTRAL SPECIES	16	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.e #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369.a #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Canis_lupus	ANCESTRAL SPECIES	20	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00550000074855.u.a.a.b	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.e #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000160286.m	ENSGT00940000162369.a #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Dingo	MODERN SPECIES	165	XPNPEP1 (ENSCAFG00020011901)	SORCS1 (ENSCAFG00020011662) #7	ENSCAFG00020011608	SORCS3 (ENSCAFG00020011503) #8	CFAP58 (ENSCAFG00020011436) #9	GSTO2 (ENSCAFG00020011420) #11	GSTO1 (ENSCAFG00020011416) #12	ENSCAFG00020011414 #13	SFR1 (ENSCAFG00020011405) #14	COL17A1 (ENSCAFG00020011291) #15	SLK (ENSCAFG00020010676) #16	ENSCAFG00020010654	STN1 (ENSCAFG00020010650) #17	SH3PXD2A (ENSCAFG00020010641) #18	NEURL1 (ENSCAFG00020010626) #19	CALHM3 (ENSCAFG00020010618) #20	CALHM1 (ENSCAFG00020010614) #21	CALHM2 (ENSCAFG00020010612) #22	PDCD11 (ENSCAFG00020010369) #23	ENSCAFG00020010350 #24	TAF5 (ENSCAFG00020010331) #25	ENSCAFG00020010327	ENSCAFG00020010324 #26	INA (ENSCAFG00020010321) #27	ENSCAFG00020010320	NT5C2 (ENSCAFG00020010290) #29	CNNM2 (ENSCAFG00020010267) #30	AS3MT (ENSCAFG00020010265) #31	BORCS7 (ENSCAFG00020010264) #32	CYP17A1 (ENSCAFG00020010261) #33	WBP1L (ENSCAFG00020010258) #34
Dog	MODERN SPECIES	20	XPNPEP1 (ENSCAFG00845027752)	SORCS1 (ENSCAFG00845026791) #7	ENSCAFG00845026526	SORCS3 (ENSCAFG00845024509) #8	ENSCAFG00845023921 #9	GSTO2 (ENSCAFG00845023661) #11	GSTO1 (ENSCAFG00845029348) #12	CFAP43 (ENSCAFG00845029264) #13	SFR1 (ENSCAFG00845029223) #14	COL17A1 (ENSCAFG00845028642) #15	SLK (ENSCAFG00845028335) #16	ENSCAFG00845028290	STN1 (ENSCAFG00845028219) #17	STN1 (ENSCAFG00845027985) #18	NEURL1 (ENSCAFG00845027843) #19	CALHM3 (ENSCAFG00845027790) #20	CALHM1 (ENSCAFG00845027760) #21	PDCD11 (ENSCAFG00845027415) #23	ATP5MD (ENSCAFG00845027273) #24	TAF5 (ENSCAFG00845027221) #25	ENSCAFG00845027176	PCGF6 (ENSCAFG00845026968) #26	INA (ENSCAFG00845026857) #27	ENSCAFG00845026826	NT5C2 (ENSCAFG00845026627) #29	CNNM2 (ENSCAFG00845025992) #30	CYP17A1 (ENSCAFG00845025701) #33	WBP1L (ENSCAFG00845025533) #34	SFXN2 (ENSCAFG00845025402) #35	ARL3 (ENSCAFG00845025280) #36	TRIM8 (ENSCAFG00845025148) #37
Red fox	MODERN SPECIES		ENSVVUG00000007668	SORCS1 (ENSVVUG00000005689) #7	SORCS3 (ENSVVUG00000004978) #8	CFAP58 (ENSVVUG00000004840) #9	ITPRIP (ENSVVUG00000004832) #10	GSTO2 (ENSVVUG00000004830) #11	GSTO1 (ENSVVUG00000004800) #12	ENSVVUG00000004792	CFAP43 (ENSVVUG00000004764) #13	SFR1 (ENSVVUG00000004758) #14	COL17A1 (ENSVVUG00000004707) #15	SLK (ENSVVUG00000004650) #16	ENSVVUG00000004636 #17	SH3PXD2A (ENSVVUG00000004587) #18	NEURL1 (ENSVVUG00000004550) #19	CALHM3 (ENSVVUG00000004548) #20	CALHM1 (ENSVVUG00000004508) #21	CALHM2 (ENSVVUG00000004502) #22	PDCD11 (ENSVVUG00000004457) #23	ATP5MD (ENSVVUG00000004442) #24	TAF5 (ENSVVUG00000004406) #25	PCGF6 (ENSVVUG00000004391) #26	INA (ENSVVUG00000004387) #27	ENSVVUG00000004383	NT5C2 (ENSVVUG00000004366) #29	CNNM2 (ENSVVUG00000004323) #30	AS3MT (ENSVVUG00000004307) #31	BORCS7 (ENSVVUG00000004302) #32	CYP17A1 (ENSVVUG00000004262) #33	WBP1L (ENSVVUG00000004241) #34	SFXN2 (ENSVVUG00000004226) #35
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00980000200805	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT01000000222030	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489.q.a.a.a #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
lion	MODERN SPECIES	11	ENSPLOG00000011024	SORCS1 (ENSPLOG00000011185) #7	SORCS3 (ENSPLOG00000011869) #8	CFAP58 (ENSPLOG00000012343) #9	ITPRIP (ENSPLOG00000012530) #10	GSTO2 (ENSPLOG00000012574) #11	GSTO1 (ENSPLOG00000012757) #12	ENSPLOG00000012892	CFAP43 (ENSPLOG00000012959) #13	ENSPLOG00000013422 #14	COL17A1 (ENSPLOG00000013594) #15	SLK (ENSPLOG00000014691) #16	STN1 (ENSPLOG00000014905) #17	SH3PXD2A (ENSPLOG00000014989) #18	NEURL1 (ENSPLOG00000015278) #19	CALHM3 (ENSPLOG00000015347) #20	CALHM1 (ENSPLOG00000015393) #21	CALHM2 (ENSPLOG00000015425) #22	PDCD11 (ENSPLOG00000015561) #23	ENSPLOG00000016095 #24	TAF5 (ENSPLOG00000016129) #25	PCGF6 (ENSPLOG00000016170) #26	INA (ENSPLOG00000016317) #27	NT5C2 (ENSPLOG00000016374) #29	CNNM2 (ENSPLOG00000016463) #30	AS3MT (ENSPLOG00000016616) #31	BORCS7 (ENSPLOG00000016773) #32	CYP17A1 (ENSPLOG00000016900) #33	WBP1L (ENSPLOG00000017200) #34	SFXN2 (ENSPLOG00000017272) #35	ARL3 (ENSPLOG00000017326) #36
leopard	MODERN SPECIES	33	ADD3 (ENSPPRG00000000364)	XPNPEP1 (ENSPPRG00000003242)	SORCS1 (ENSPPRG00000009700) #7	SORCS3 (ENSPPRG00000013772) #8	CFAP58 (ENSPPRG00000014331) #9	GSTO2 (ENSPPRG00000018048) #11	GSTO1 (ENSPPRG00000022553) #12	ENSPPRG00000024492	CFAP43 (ENSPPRG00000023238) #13	SFR1 (ENSPPRG00000000336) #14	COL17A1 (ENSPPRG00000009059) #15	SLK (ENSPPRG00000009662) #16	STN1 (ENSPPRG00000010476) #17	SH3PXD2A (ENSPPRG00000011103) #18	NEURL1 (ENSPPRG00000011450) #19	CALHM3 (ENSPPRG00000011663) #20	CALHM1 (ENSPPRG00000011899) #21	CALHM2 (ENSPPRG00000012922) #22	PDCD11 (ENSPPRG00000015133) #23	ENSPPRG00000017518 #24	TAF5 (ENSPPRG00000019671) #25	PCGF6 (ENSPPRG00000021382) #26	INA (ENSPPRG00000000231) #27	ENSPPRG00000000418	ENSPPRG00000002375	NT5C2 (ENSPPRG00000002954) #29	CNNM2 (ENSPPRG00000003743) #30	AS3MT (ENSPPRG00000004722) #31	BORCS7 (ENSPPRG00000005710) #32	CYP17A1 (ENSPPRG00000006800) #33	WBP1L (ENSPPRG00000007200) #34
Tiger	MODERN SPECIES	136																CALHM3 (ENSPTIG00000012273) #20	CALHM1 (ENSPTIG00000012221) #21	CALHM2 (ENSPTIG00000011982) #22	PDCD11 (ENSPTIG00000011433) #23	ENSPTIG00000010699 #24	TAF5 (ENSPTIG00000010430) #25	ENSPTIG00000010232 #26	INA (ENSPTIG00000009953) #27	ENSPTIG00000009780	NT5C2 (ENSPTIG00000008167) #29	CNNM2 (ENSPTIG00000007177) #30	AS3MT (ENSPTIG00000005929) #31	BORCS7 (ENSPTIG00000005646) #32	CYP17A1 (ENSPTIG00000004247) #33	WBP1L (ENSPTIG00000002920) #34	SFXN2 (ENSPTIG00000000655) #35
Cat	MODERN SPECIES	242	XPNPEP1 (ENSFCAG00000003518)	SORCS1 (ENSFCAG00000004160) #7	SORCS3 (ENSFCAG00000007482) #8	CFAP58 (ENSFCAG00000006024) #9	ITPRIP (ENSFCAG00000006023) #10	GSTO2 (ENSFCAG00000006022) #11	GSTO1 (ENSFCAG00000025597) #12	ENSFCAG00000041951	CFAP43 (ENSFCAG00000011533) #13	SFR1 (ENSFCAG00000028988) #14	COL17A1 (ENSFCAG00000004299) #15	SLK (ENSFCAG00000004298) #16	STN1 (ENSFCAG00000030378) #17	SH3PXD2A (ENSFCAG00000002390) #18	NEURL1 (ENSFCAG00000026091) #19	CALHM3 (ENSFCAG00000002388) #20	CALHM1 (ENSFCAG00000002387) #21	CALHM2 (ENSFCAG00000002386) #22	PDCD11 (ENSFCAG00000002384) #23	ENSFCAG00000002383 #24	TAF5 (ENSFCAG00000002382) #25	PCGF6 (ENSFCAG00000026427) #26	INA (ENSFCAG00000025885) #27	ENSFCAG00000037878	NT5C2 (ENSFCAG00000013705) #29	CNNM2 (ENSFCAG00000022183) #30	AS3MT (ENSFCAG00000030999) #31	ENSFCAG00000041677	CYP17A1 (ENSFCAG00000001254) #33	WBP1L (ENSFCAG00000042551) #34	ARL3 (ENSFCAG00000001251) #36
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00410000028833	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00950000186454	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Greater horseshoe bat	MODERN SPECIES	7	XPNPEP1 (ENSRFEG00010012679)	ENSRFEG00010012848	SORCS1 (ENSRFEG00010012933) #7	SORCS3 (ENSRFEG00010014389) #8	CFAP58 (ENSRFEG00010014856) #9	ITPRIP (ENSRFEG00010015219) #10	GSTO2 (ENSRFEG00010015255) #11	GSTO1 (ENSRFEG00010015386) #12	CFAP43 (ENSRFEG00010015507) #13	SFR1 (ENSRFEG00010015584) #14	COL17A1 (ENSRFEG00010015674) #15	SLK (ENSRFEG00010015762) #16	STN1 (ENSRFEG00010015891) #17	SH3PXD2A (ENSRFEG00010015976) #18	NEURL1 (ENSRFEG00010016052) #19	CALHM3 (ENSRFEG00010016094) #20	CALHM1 (ENSRFEG00010016159) #21	CALHM2 (ENSRFEG00010016197) #22	PDCD11 (ENSRFEG00010016231) #23	ENSRFEG00010016305 #24	TAF5 (ENSRFEG00010016357) #25	PCGF6 (ENSRFEG00010016536) #26	ENSRFEG00010016624	INA (ENSRFEG00010016674) #27	ENSRFEG00010016714	NT5C2 (ENSRFEG00010016737) #29	CNNM2 (ENSRFEG00010016866) #30	BORCS7 (ENSRFEG00010016916) #32	CYP17A1 (ENSRFEG00010016955) #33	ENSRFEG00010017152	WBP1L (ENSRFEG00010017206) #34
Microbat	MODERN SPECIES	1099			SORCS3 (ENSMLUG00000006688) #8	CFAP58 (ENSMLUG00000012414) #9	ITPRIP (ENSMLUG00000013395) #10	GSTO2 (ENSMLUG00000025624) #11	GSTO1 (ENSMLUG00000013385) #12	ENSMLUG00000013359 #13	ENSMLUG00000023358 #13	SFR1 (ENSMLUG00000013352) #14	COL17A1 (ENSMLUG00000013328) #15	SLK (ENSMLUG00000013319) #16	STN1 (ENSMLUG00000002037) #17	SH3PXD2A (ENSMLUG00000013186) #18	NEURL1 (ENSMLUG00000013182) #19	CALHM3 (ENSMLUG00000013177) #20	CALHM1 (ENSMLUG00000005022) #21	PDCD11 (ENSMLUG00000004997) #23	TAF5 (ENSMLUG00000022791) #25	PCGF6 (ENSMLUG00000004985) #26	INA (ENSMLUG00000004978) #27	ENSMLUG00000004962	ENSMLUG00000030173	CNNM2 (ENSMLUG00000023959) #30	BORCS7 (ENSMLUG00000024332) #32	CYP17A1 (ENSMLUG00000004363) #33	ENSMLUG00000012620 #34	SFXN2 (ENSMLUG00000012611) #35	ARL3 (ENSMLUG00000012603) #36	TRIM8 (ENSMLUG00000012594) #37	SUFU (ENSMLUG00000012590)
Megabat	MODERN SPECIES	1281					CFAP58 (ENSPVAG00000004213) #9	ITPRIP (ENSPVAG00000004212) #10	GSTO2 (ENSPVAG00000004210) #11	GSTO1 (ENSPVAG00000004209) #12	CFAP43 (ENSPVAG00000004205) #13	SFR1 (ENSPVAG00000004202) #14	COL17A1 (ENSPVAG00000004189) #15	SLK (ENSPVAG00000004188) #16	STN1 (ENSPVAG00000004187) #17	SH3PXD2A (ENSPVAG00000004186) #18	NEURL1 (ENSPVAG00000004185) #19	CALHM3 (ENSPVAG00000004183) #20	CALHM1 (ENSPVAG00000004182) #21	CALHM2 (ENSPVAG00000004181) #22	PDCD11 (ENSPVAG00000004176) #23	ATP5MK (ENSPVAG00000004175) #24	TAF5 (ENSPVAG00000004172) #25	PCGF6 (ENSPVAG00000004169) #26	INA (ENSPVAG00000004168) #27
Equus	ANCESTRAL SPECIES	9	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000168158	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Horse	MODERN SPECIES		SORCS1 (ENSECAG00000023046) #7	SORCS3 (ENSECAG00000008241) #8	ENSECAG00000054595	CFAP58 (ENSECAG00000019301) #9	ITPRIP (ENSECAG00000010108) #10	GSTO2 (ENSECAG00000058010) #11	ENSECAG00000038610	CFAP43 (ENSECAG00000021278) #13	GSTO1 (ENSECAG00000011560) #12	SFR1 (ENSECAG00000005386) #14	COL17A1 (ENSECAG00000007909) #15	SLK (ENSECAG00000010212) #16	STN1 (ENSECAG00000023477) #17	SH3PXD2A (ENSECAG00000009545) #18	NEURL1 (ENSECAG00000012870) #19	CALHM3 (ENSECAG00000019882) #20	CALHM1 (ENSECAG00000020482) #21	CALHM2 (ENSECAG00000020495) #22	PDCD11 (ENSECAG00000020507) #23	ENSECAG00000028196 #24	TAF5 (ENSECAG00000005853) #25	PCGF6 (ENSECAG00000017183) #26	NT5C2 (ENSECAG00000022574) #29	INA (ENSECAG00000032667) #27	CNNM2 (ENSECAG00000018159) #30	AS3MT (ENSECAG00000018722) #31	ENSECAG00000047543 #32	CYP17A1 (ENSECAG00000010022) #33	WBP1L (ENSECAG00000024142) #34	SFXN2 (ENSECAG00000024231) #35	ARL3 (ENSECAG00000000300) #36
Donkey	MODERN SPECIES	11	SORCS1 (ENSEASG00005015008) #7	SORCS3 (ENSEASG00005015034) #8	ENSEASG00005015044	CFAP58 (ENSEASG00005015046) #9	ITPRIP (ENSEASG00005035607) #10	GSTO2 (ENSEASG00005015054) #11	CFAP43 (ENSEASG00005023632) #13	GSTO1 (ENSEASG00005015056) #12	SFR1 (ENSEASG00005015065) #14	ENSEASG00005038642	COL17A1 (ENSEASG00005015077) #15	SLK (ENSEASG00005015130) #16	STN1 (ENSEASG00005015134) #17	SH3PXD2A (ENSEASG00005015136) #18	NEURL1 (ENSEASG00005015146) #19	CALHM3 (ENSEASG00005031203) #20	ENSEASG00005028407 #21	ENSEASG00005034926 #22	ENSEASG00005015151 #21	ENSEASG00005027410 #22	PDCD11 (ENSEASG00005015159) #23	ENSEASG00005015170 #24	TAF5 (ENSEASG00005034630) #25	PCGF6 (ENSEASG00005015173) #26	INA (ENSEASG00005015178) #27	NT5C2 (ENSEASG00005015183) #29	CNNM2 (ENSEASG00005015189) #30	AS3MT (ENSEASG00005015193) #31	BORCS7 (ENSEASG00005032646) #32	ENSEASG00005035755	CYP17A1 (ENSEASG00005015197) #33
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Xenarthra	ANCESTRAL SPECIES	61														ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36	ENSGT00940000157919 #37
Armadillo	MODERN SPECIES	3168														SH3PXD2A (ENSDNOG00000049739) #18	NEURL1 (ENSDNOG00000040304) #19	CALHM3 (ENSDNOG00000009406) #20	CALHM1 (ENSDNOG00000013901) #21	CALHM2 (ENSDNOG00000013897) #22	PDCD11 (ENSDNOG00000013838) #23	ATP5MK (ENSDNOG00000013833) #24	TAF5 (ENSDNOG00000035792) #25	PCGF6 (ENSDNOG00000034623) #26	INA (ENSDNOG00000002852) #27	NT5C2 (ENSDNOG00000000151) #29	ENSDNOG00000000149 #30
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000014952	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35
Tenrec	MODERN SPECIES	7375																CALHM3 (ENSETEG00000006386) #20
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00940000155257	ENSGT00940000157716	ENSGT01030000234563.b.a.b.b.a #7	ENSGT01030000234563.b.a.b.b.b #8	ENSGT00530000063534.b #9	ENSGT01050000244827.D.b.b #10	ENSGT00940000162030 #11	ENSGT00940000155351 #12	ENSGT00530000064714 #13	ENSGT00390000018550 #14	ENSGT00940000161242 #15	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00390000015489 #24	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000162369 #29	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Elephant	MODERN SPECIES	3	XPNPEP1 (ENSLAFG00000001450)	SORCS1 (ENSLAFG00000014509) #7	SORCS3 (ENSLAFG00000009226) #8	CFAP58 (ENSLAFG00000010295) #9	ITPRIP (ENSLAFG00000001113) #10	GSTO2 (ENSLAFG00000000236) #11	GSTO1 (ENSLAFG00000022681) #12	ENSLAFG00000027860 #13	ENSLAFG00000000231 #13	SFR1 (ENSLAFG00000000228) #14	COL17A1 (ENSLAFG00000011870) #15	SLK (ENSLAFG00000011452) #16	STN1 (ENSLAFG00000004232) #17	SH3PXD2A (ENSLAFG00000022244) #18	NEURL1 (ENSLAFG00000015401) #19	CALHM3 (ENSLAFG00000026450) #20	CALHM1 (ENSLAFG00000008404) #21	CALHM2 (ENSLAFG00000008403) #22	PDCD11 (ENSLAFG00000008398) #23	ATP5MK (ENSLAFG00000008395) #24	TAF5 (ENSLAFG00000008391) #25	PCGF6 (ENSLAFG00000008386) #26	INA (ENSLAFG00000008383) #27	NT5C2 (ENSLAFG00000012056) #29	CNNM2 (ENSLAFG00000012051) #30	AS3MT (ENSLAFG00000012045) #31	ENSLAFG00000020646 #32	CYP17A1 (ENSLAFG00000002044) #33	WBP1L (ENSLAFG00000002043) #34	SFXN2 (ENSLAFG00000005072) #35	ARL3 (ENSLAFG00000005070) #36
Hyrax	MODERN SPECIES	9823																CALHM3 (ENSPCAG00000005619) #20
Platypus	MODERN SPECIES	7	MXI1 (ENSOANG00000001600)	ADD3 (ENSOANG00000001601)	XPNPEP1 (ENSOANG00000001602)	SORCS1 (ENSOANG00000001604) #7	SORCS3 (ENSOANG00000001606) #8	CFAP58 (ENSOANG00000001608) #9	ITPRIP (ENSOANG00000001611) #10	GSTO1 (ENSOANG00000049378) #12	CFAP43 (ENSOANG00000001619) #13	ENSOANG00000048592 #14	ENSOANG00000001623	SLK (ENSOANG00000010956) #16	STN1 (ENSOANG00000041497) #17	SH3PXD2A (ENSOANG00000001630) #18	NEURL1 (ENSOANG00000001631) #19	CALHM3 (ENSOANG00000001633) #20	CALHM1 (ENSOANG00000001634) #21	CALHM2 (ENSOANG00000043354) #22	PDCD11 (ENSOANG00000001636) #23	ATP5MK (ENSOANG00000020153) #24	TAF5 (ENSOANG00000001637) #25	PCGF6 (ENSOANG00000001639) #26	ENSOANG00000001640	CNNM2 (ENSOANG00000001643) #30	ENSOANG00000001644 #31	ENSOANG00000051063	BORCS7 (ENSOANG00000001647) #32	CYP17A1 (ENSOANG00000040450) #33	WBP1L (ENSOANG00000001648) #34	SFXN2 (ENSOANG00000001649) #35	ARL3 (ENSOANG00000001653) #36
Anura	ANCESTRAL SPECIES	25	ENSGT00940000165097.a.a	ENSGT00390000011408	ENSGT00940000160175.b	ENSGT00940000164278	ENSGT00570000079216	ENSGT01030000234549.a.b	ENSGT00940000163896	ENSGT00940000155351 #12	ENSGT00390000018550 #14	ENSGT00940000163514.C	ENSGT00940000168158	ENSGT00940000156184 #16	ENSGT00390000000909 #17	ENSGT00940000157732 #18	ENSGT00940000156696.B #19	ENSGT01030000234610.b.a.b.b #20	ENSGT01030000234610.b.a.b.a #21	ENSGT01030000234610.b.a.a #22	ENSGT00390000012228 #23	ENSGT00940000166377	ENSGT00940000153342.a #25	ENSGT00940000158034 #26	ENSGT00940000154418.a.a #27	ENSGT00940000163289.b	ENSGT00940000159034 #30	ENSGT00390000001742.a #31	ENSGT00390000015849 #32	ENSGT00940000155588.b #33	ENSGT00950000183109.c.a.a #34	ENSGT01030000234641.b.a.a #35	ENSGT00940000155737.b #36
Frog	MODERN SPECIES	7	ENSXETG00000046321	ENSXETG00000037556	XB5799637 (ENSXETG00000026599)	cfap46 (ENSXETG00000014784)	ENSXETG00000042597	ENSXETG00000014777	gsto1 (ENSXETG00000026601)	gsto2 (ENSXETG00000026602) #12	sfr1 (ENSXETG00000011407) #14	col17a1 (ENSXETG00000033563)	slk (ENSXETG00000030054) #16	stn1 (ENSXETG00000011402) #17	ENSXETG00000047506	sh3pxd2a (ENSXETG00000011399) #18	neurl1 (ENSXETG00000011397) #19	calhm3 (ENSXETG00000033589) #20	calhm1 (ENSXETG00000031601) #21	calhm2 (ENSXETG00000011395) #22	pdcd11 (ENSXETG00000009482) #23	atp5mk (ENSXETG00000034854)	taf5 (ENSXETG00000011394) #25	pcgf6 (ENSXETG00000038066) #26	ina (ENSXETG00000009478) #27	nt5c2 (ENSXETG00000009475)	cnnm2 (ENSXETG00000009464) #30	as3mt.2 (ENSXETG00000031996) #31	borcs7 (ENSXETG00000037489) #32	cyp17a1 (ENSXETG00000015229) #33	wbp1l (ENSXETG00000031465) #34	sfxn2 (ENSXETG00000015227) #35	arl3 (ENSXETG00000015225) #36
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000023962	TRUB1 (ENSLLEG00000024003)	ATRNL1 (ENSLLEG00000024130)	ENSLLEG00000024434	ENSLLEG00000024454	GFRA1 (ENSLLEG00000024500)	ENSLLEG00000024775	ENSLLEG00000024963	ENSLLEG00000025335	ENSLLEG00000025427	SLK (ENSLLEG00000025533) #16	STN1 (ENSLLEG00000026144) #17	SH3PXD2A (ENSLLEG00000026291) #18	NEURL1 (ENSLLEG00000026595) #19	ENSLLEG00000026720 #20	CALHM3 (ENSLLEG00000026757) #20	CALHM1 (ENSLLEG00000026794) #21	CALHM2 (ENSLLEG00000026828) #22	ENSLLEG00000026851	PDCD11 (ENSLLEG00000026943) #23	ENSLLEG00000027203	TAF5 (ENSLLEG00000027307) #25	PCGF6 (ENSLLEG00000027942) #26	INA (ENSLLEG00000028090) #27	ENSLLEG00000028130	CNNM2 (ENSLLEG00000028384) #30	ENSLLEG00000028460 #31	ENSLLEG00000028609	ENSLLEG00000028642 #31	BORCS7 (ENSLLEG00000028736) #32	CYP17A1 (ENSLLEG00000028763) #33
Leishan spiny toad	MODERN SPECIES	9	FHIP2A (ENSLLEG00000022881)	ENSLLEG00000023962	TRUB1 (ENSLLEG00000024003)	ATRNL1 (ENSLLEG00000024130)	ENSLLEG00000024434	ENSLLEG00000024454	GFRA1 (ENSLLEG00000024500)	ENSLLEG00000024775	ENSLLEG00000024963	ENSLLEG00000025335	ENSLLEG00000025427	SLK (ENSLLEG00000025533) #16	STN1 (ENSLLEG00000026144) #17	SH3PXD2A (ENSLLEG00000026291) #18	NEURL1 (ENSLLEG00000026595) #19	ENSLLEG00000026720 #20	CALHM3 (ENSLLEG00000026757) #20	CALHM1 (ENSLLEG00000026794) #21	CALHM2 (ENSLLEG00000026828) #22	ENSLLEG00000026851	PDCD11 (ENSLLEG00000026943) #23	ENSLLEG00000027203	TAF5 (ENSLLEG00000027307) #25	PCGF6 (ENSLLEG00000027942) #26	INA (ENSLLEG00000028090) #27	ENSLLEG00000028130	CNNM2 (ENSLLEG00000028384) #30	ENSLLEG00000028460 #31	ENSLLEG00000028609	ENSLLEG00000028642 #31	BORCS7 (ENSLLEG00000028736) #32
Coelacanth	DUPLICATION
Coelacanth	MODERN SPECIES	3090															ENSLACG00000022571 #20	CALHM3 (ENSLACG00000002416) #20	CALHM1 (ENSLACG00000003181) #21
Coelacanth	MODERN SPECIES	3090																ENSLACG00000022571 #20	CALHM3 (ENSLACG00000002416) #20	CALHM1 (ENSLACG00000003181) #21
Elephant shark	MODERN SPECIES	3206																CALHM3 (ENSCMIG00000005224) #20
Cyclostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.a #20
Lamprey	DUPLICATION
Lamprey	MODERN SPECIES	4898																ENSPMAG00000002610 #20
Lamprey	MODERN SPECIES	4832																ENSPMAG00000002242 #20
Hagfish	MODERN SPECIES	1502	sparc (ENSEBUG00000001124)	ENSEBUG00000006575	ENSEBUG00000015914	lypla1 (ENSEBUG00000004598)	gale (ENSEBUG00000016771)	ENSEBUG00000013567	tube1 (ENSEBUG00000012346)	ENSEBUG00000001939	ENSEBUG00000017027	ENSEBUG00000002510	ENSEBUG00000006597	ENSEBUG00000015169	ENSEBUG00000001417	ENSEBUG00000015379	CUTC (ENSEBUG00000001690)	ENSEBUG00000013131 #20	ENSEBUG00000001584	ENSEBUG00000002842	ENSEBUG00000002225	ENSEBUG00000000976	ENSEBUG00000006956	ENSEBUG00000012754	ENSEBUG00000016441	ENSEBUG00000006988	ENSEBUG00000004409
Vertebrata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.b ##20
Gnathostomata	ANCESTRAL SPECIES	364										ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772
Euteleostomi	ANCESTRAL SPECIES	11	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Sarcopterygii	ANCESTRAL SPECIES	16	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000089228
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Aves	ANCESTRAL SPECIES	10	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Neognathae_c	ANCESTRAL SPECIES	5		ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Golden eagle	MODERN SPECIES	11	CCN6 (ENSACCG00020006390)	ENSACCG00020006395	ENSACCG00020006403	ENSACCG00020006409	LAMA4 (ENSACCG00020006424)	MARCKS (ENSACCG00020006456)	HDAC2 (ENSACCG00020006464)	HS3ST5 (ENSACCG00020006476)	FRK (ENSACCG00020006485)	NT5DC1 (ENSACCG00020006495)	ENSACCG00020006507	DSE (ENSACCG00020006515)	ENSACCG00020006525 ##20	TRAPPC3L (ENSACCG00020006542)	CALHM5 (ENSACCG00020006553) ##20	CALHM4 (ENSACCG00020006561) ##20	RWDD1 (ENSACCG00020006571)	ENSACCG00020006579	ZUP1 (ENSACCG00020006610)	KPNA5 (ENSACCG00020006648)	FAM162B (ENSACCG00020006669)	GPRC6A (ENSACCG00020006680)	RFX6 (ENSACCG00020006700)	VGLL2 (ENSACCG00020006724)	ENSACCG00020006739	CEP57L1 (ENSACCG00020006757)	SESN1 (ENSACCG00020006789)	ARMC2 (ENSACCG00020006846)	ENSACCG00020006878	AFG1L (ENSACCG00020006893)	SNX3 (ENSACCG00020006910)
Kakapo	MODERN SPECIES	23	FYN (ENSSHBG00005017280)	CCN6 (ENSSHBG00005017277)	ENSSHBG00005017274	TUBE1 (ENSSHBG00005017269)	LAMA4 (ENSSHBG00005004609)	MARCKS (ENSSHBG00005003980)	HDAC2 (ENSSHBG00005003956)	HS3ST5 (ENSSHBG00005003938)	FRK (ENSSHBG00005003903)	ENSSHBG00005003874	NT5DC1 (ENSSHBG00005003851)	DSE (ENSSHBG00005003820)	CALHM6 (ENSSHBG00005003805) ##20	CALHM5 (ENSSHBG00005003799) ##20	TRAPPC3L (ENSSHBG00005003784)	CALHM4 (ENSSHBG00005003749) ##20	RWDD1 (ENSSHBG00005003718)	ZUP1 (ENSSHBG00005003702)	KPNA5 (ENSSHBG00005003578)	FAM162B (ENSSHBG00005003515)	GPRC6A (ENSSHBG00005003502)	RFX6 (ENSSHBG00005003482)	VGLL2 (ENSSHBG00005003458)	ROS1 (ENSSHBG00005003030)	DCBLD1 (ENSSHBG00005002782)	GOPC (ENSSHBG00005002757)	ENSSHBG00005002743	NUS1 (ENSSHBG00005002724)	ENSSHBG00005002709	SLC35F1 (ENSSHBG00005002697)	PLN (ENSSHBG00005002660)
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403	ENSGT00620000087993.a.a
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403	ENSGT00620000087993.a.a
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Common canary	MODERN SPECIES	1	REV3L (ENSSCAG00000000019)	ENSSCAG00000000009	FYN (ENSSCAG00000000004)	CCN6 (ENSSCAG00000014994)	TUBE1 (ENSSCAG00000014989)	LAMA4 (ENSSCAG00000014967)	HDAC2 (ENSSCAG00000014953)	HS3ST5 (ENSSCAG00000014948)	FRK (ENSSCAG00000014876)	ENSSCAG00000014847	NT5DC1 (ENSSCAG00000014841)	DSE (ENSSCAG00000014836)	CALHM6 (ENSSCAG00000014832) ##20	CALHM5 (ENSSCAG00000014827) ##20	TRAPPC3L (ENSSCAG00000014820)	CALHM4 (ENSSCAG00000014792) ##20	RWDD1 (ENSSCAG00000014762)	ZUP1 (ENSSCAG00000014748)	KPNA5 (ENSSCAG00000014738)	FAM162B (ENSSCAG00000014732)	GPRC6A (ENSSCAG00000014730)	RFX6 (ENSSCAG00000014718)	VGLL2 (ENSSCAG00000014711)	ROS1 (ENSSCAG00000014691)	DCBLD1 (ENSSCAG00000014671)	GOPC (ENSSCAG00000014666)	ENSSCAG00000014659	NUS1 (ENSSCAG00000014650)	SLC35F1 (ENSSCAG00000014641)	CEP85L (ENSSCAG00000014635)	ASF1A (ENSSCAG00000014626)
Medium ground finch	MODERN SPECIES	9	FYN (ENSGFOG00000002985)	CCN6 (ENSGFOG00000003008)	TUBE1 (ENSGFOG00000003060)	LAMA4 (ENSGFOG00000003411)	ENSGFOG00000007518	HDAC2 (ENSGFOG00000007522)	HS3ST5 (ENSGFOG00000007531)	FRK (ENSGFOG00000007538)	NT5DC1 (ENSGFOG00000007552)	ENSGFOG00000007579	ENSGFOG00000007583	DSE (ENSGFOG00000007589)	CALHM6 (ENSGFOG00000007593) ##20	TRAPPC3L (ENSGFOG00000007597)	CALHM5 (ENSGFOG00000007606) ##20	CALHM4 (ENSGFOG00000007609) ##20	RWDD1 (ENSGFOG00000007640)	ZUP1 (ENSGFOG00000007669)	KPNA5 (ENSGFOG00000007745)	FAM162B (ENSGFOG00000007757)	GPRC6A (ENSGFOG00000007765)	RFX6 (ENSGFOG00000007776)	VGLL2 (ENSGFOG00000007798)	ROS1 (ENSGFOG00000007810)	DCBLD1 (ENSGFOG00000007857)	GOPC (ENSGFOG00000007881)	ENSGFOG00000007920	NUS1 (ENSGFOG00000007937)	SLC35F1 (ENSGFOG00000007946)	CEP85L (ENSGFOG00000007957)	PLN (ENSGFOG00000007974)
Flycatcher	MODERN SPECIES	21	FYN (ENSFALG00000010875)	CCN6 (ENSFALG00000028771)	TUBE1 (ENSFALG00000010959)	LAMA4 (ENSFALG00000010965)	HDAC2 (ENSFALG00000010975)	HS3ST5 (ENSFALG00000010977)	FRK (ENSFALG00000010983)	ENSFALG00000028957	ENSFALG00000010995	ENSFALG00000023706	DSE (ENSFALG00000011001)	ENSFALG00000010999 ##20	ENSFALG00000011005 ##20	TRAPPC3L (ENSFALG00000011010)	CALHM5 (ENSFALG00000023025) ##20	CALHM4 (ENSFALG00000011017) ##20	ENSFALG00000028887	RWDD1 (ENSFALG00000024864)	ZUP1 (ENSFALG00000011032)	KPNA5 (ENSFALG00000011039)	FAM162B (ENSFALG00000011046)	GPRC6A (ENSFALG00000011050)	RFX6 (ENSFALG00000011057)	VGLL2 (ENSFALG00000011071)	ROS1 (ENSFALG00000011085)	DCBLD1 (ENSFALG00000011109)	GOPC (ENSFALG00000011117)	ENSFALG00000011131	NUS1 (ENSFALG00000022865)	SLC35F1 (ENSFALG00000011158)	PLN (ENSFALG00000015284)
Great tit	MODERN SPECIES	22	ENSPMJG00000015285	FYN (ENSPMJG00000015284)	CCN6 (ENSPMJG00000015281)	TUBE1 (ENSPMJG00000015280)	LAMA4 (ENSPMJG00000014201)	MARCKS (ENSPMJG00000014178)	HDAC2 (ENSPMJG00000014173)	HS3ST5 (ENSPMJG00000014171)	FRK (ENSPMJG00000014147)	ENSPMJG00000014145	NT5DC1 (ENSPMJG00000014143)	DSE (ENSPMJG00000014142)	CALHM6 (ENSPMJG00000014108) ##20	TRAPPC3L (ENSPMJG00000014105)	CALHM5 (ENSPMJG00000014102) ##20	CALHM4 (ENSPMJG00000014100) ##20	RWDD1 (ENSPMJG00000014098)	ZUP1 (ENSPMJG00000014097)	KPNA5 (ENSPMJG00000014094)	FAM162B (ENSPMJG00000014092)	GPRC6A (ENSPMJG00000014090)	RFX6 (ENSPMJG00000014077)	VGLL2 (ENSPMJG00000014058)	ROS1 (ENSPMJG00000014055)	DCBLD1 (ENSPMJG00000014053)	GOPC (ENSPMJG00000014050)	ENSPMJG00000014049	NUS1 (ENSPMJG00000014047)	ENSPMJG00000014037	SLC35F1 (ENSPMJG00000014036)	PLN (ENSPMJG00000014007)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Anatidae	ANCESTRAL SPECIES		ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Pink-footed goose	MODERN SPECIES	43	ENSABRG00000000776	FYN (ENSABRG00000000747)	CCN6 (ENSABRG00000000698)	TUBE1 (ENSABRG00000000661)	LAMA4 (ENSABRG00000000629)	MARCKS (ENSABRG00000000577)	HDAC2 (ENSABRG00000000551)	HS3ST5 (ENSABRG00000000532)	FRK (ENSABRG00000000463)	ENSABRG00000000444	NT5DC1 (ENSABRG00000000333)	DSE (ENSABRG00000000313)	CALHM6 (ENSABRG00000000306) ##20	CALHM5 (ENSABRG00000000291) ##20	TRAPPC3L (ENSABRG00000000277)	CALHM4 (ENSABRG00000000249) ##20	RWDD1 (ENSABRG00000000238)
Duck	MODERN SPECIES	21	FYN (ENSAPLG00000014917)	CCN6 (ENSAPLG00000014838)	TUBE1 (ENSAPLG00000014557)	LAMA4 (ENSAPLG00000013937)	ENSAPLG00000021734	MARCKS (ENSAPLG00000030242)	HDAC2 (ENSAPLG00000006926)	HS3ST5 (ENSAPLG00000006908)	FRK (ENSAPLG00000009906)	ENSAPLG00000010244	NT5DC1 (ENSAPLG00000010010)	ENSAPLG00000010250	CALHM6 (ENSAPLG00000010323) ##20	ENSAPLG00000030127	TRAPPC3L (ENSAPLG00000010373)	CALHM4 (ENSAPLG00000010403) ##20	RWDD1 (ENSAPLG00000010404)	ENSAPLG00000004407	ZUP1 (ENSAPLG00000004367)	KPNA5 (ENSAPLG00000003395)	FAM162B (ENSAPLG00000025053)	ENSAPLG00000003079	ENSAPLG00000024644	RFX6 (ENSAPLG00000002929)	VGLL2 (ENSAPLG00000027398)	ROS1 (ENSAPLG00000002159)	DCBLD1 (ENSAPLG00000001269)	GOPC (ENSAPLG00000000612)	ENSAPLG00000000593	NUS1 (ENSAPLG00000015621)	SLC35F1 (ENSAPLG00000015578)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723.g	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Japanese quail	MODERN SPECIES	21	FYN (ENSCJPG00005009237)	CCN6 (ENSCJPG00005009235)	TUBE1 (ENSCJPG00005009234)	LAMA4 (ENSCJPG00005009233)	MARCKS (ENSCJPG00005009226)	ENSCJPG00005009224	HDAC2 (ENSCJPG00005009223)	HS3ST5 (ENSCJPG00005009222)	FRK (ENSCJPG00005009218)	ENSCJPG00005009217	NT5DC1 (ENSCJPG00005009216)	DSE (ENSCJPG00005009215)	CALHM6 (ENSCJPG00005009214) ##20	CALHM5 (ENSCJPG00005009213) ##20	TRAPPC3L (ENSCJPG00005009212)	CALHM4 (ENSCJPG00005009211) ##20	RWDD1 (ENSCJPG00005009210)	ENSCJPG00005009209	ENSCJPG00005009208	ZUP1 (ENSCJPG00005009207)	FAM162B (ENSCJPG00005009206)	KPNA5 (ENSCJPG00005009205)	GPRC6A (ENSCJPG00005009204)	RFX6 (ENSCJPG00005009203)	VGLL2 (ENSCJPG00005009201)	ENSCJPG00005009200	ROS1 (ENSCJPG00005009199)	DCBLD1 (ENSCJPG00005009197)	GOPC (ENSCJPG00005009195)	ENSCJPG00005009194	NUS1 (ENSCJPG00005009193)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723.g	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Chicken	MODERN SPECIES	22	CCN6 (ENSGALG00010013521)	ENSGALG00010015164	TUBE1 (ENSGALG00010013508)	LAMA4 (ENSGALG00010013458)	ENSGALG00010013411	MARCKS (ENSGALG00010013402)	HDAC2 (ENSGALG00010013392)	HS3ST5 (ENSGALG00010013363)	ENSGALG00010013350	FRK (ENSGALG00010014602)	COL10A1 (ENSGALG00010012719)	NT5DC1 (ENSGALG00010012690)	DSE (ENSGALG00010012650)	FAM26F (ENSGALG00010014873) ##20	FAM26E (ENSGALG00010014866) ##20	FAM26D (ENSGALG00010014851) ##20	TRAPPC3L (ENSGALG00010014830)	RWDD1 (ENSGALG00010014812)	ENSGALG00010014764	ZUP1 (ENSGALG00010014734)	KPNA5 (ENSGALG00010014707)	FAM162B (ENSGALG00010014653)	GPRC6A (ENSGALG00010014624)	RFX6 (ENSGALG00010012330)	VGLL2 (ENSGALG00010012376)	ROS1 (ENSGALG00010012360)	DCBLD1 (ENSGALG00010012354)	GOPC (ENSGALG00010012341)	ENSGALG00010014560	NUS1 (ENSGALG00010012629)	SLC35F1 (ENSGALG00010015035)
Turkey	MODERN SPECIES	11	ENSMGAG00000022679	ENSMGAG00000018204	ENSMGAG00000013519	ENSMGAG00000013520	ENSMGAG00000013523	ENSMGAG00000013524	OSTM1 (ENSMGAG00000013498)	NR2E1 (ENSMGAG00000013495)	SNX3 (ENSMGAG00000013494)	AFG1L (ENSMGAG00000013490)	ENSMGAG00000013379	ENSMGAG00000018692	ENSMGAG00000013384 ##20	CALHM5 (ENSMGAG00000019395) ##20	ENSMGAG00000013381	ENSMGAG00000013380 ##20	ENSMGAG00000013385	ENSMGAG00000013382	ENSMGAG00000013387	ENSMGAG00000022386	ENSMGAG00000013388	ENSMGAG00000021850	ENSMGAG00000013395	ENSMGAG00000013396	ENSMGAG00000021302	ENSMGAG00000022379	LAMA4 (ENSMGAG00000013404)	ENSMGAG00000017970	ENSMGAG00000013411	ENSMGAG00000013414	ENSMGAG00000022768
African ostrich	MODERN SPECIES	837							HDAC2 (ENSSCUG00000017413)	HS3ST5 (ENSSCUG00000017412)	FRK (ENSSCUG00000017408)	ENSSCUG00000017407	NT5DC1 (ENSSCUG00000017405)	DSE (ENSSCUG00000017404)	CALHM6 (ENSSCUG00000017403) ##20	CALHM5 (ENSSCUG00000017402) ##20	TRAPPC3L (ENSSCUG00000017401)	CALHM4 (ENSSCUG00000017400) ##20	RWDD1 (ENSSCUG00000017398)	ENSSCUG00000017396	ZUP1 (ENSSCUG00000017391)	KPNA5 (ENSSCUG00000017388)	ENSSCUG00000017386	GPRC6A (ENSSCUG00000017385)	RFX6 (ENSSCUG00000017383)	ROS1 (ENSSCUG00000017377)	DCBLD1 (ENSSCUG00000017375)	GOPC (ENSSCUG00000017372)	ENSSCUG00000017369	NUS1 (ENSSCUG00000017368)	SLC35F1 (ENSSCUG00000017363)	PLN (ENSSCUG00000017359)	CEP85L (ENSSCUG00000017358)
Australian saltwater crocodile	MODERN SPECIES	38	FYN (ENSCPRG00005002011)	CCN6 (ENSCPRG00005002029)	ENSCPRG00005002036	TUBE1 (ENSCPRG00005002040)	LAMA4 (ENSCPRG00005002233)	HDAC2 (ENSCPRG00005003350)	HS3ST5 (ENSCPRG00005003370)	FRK (ENSCPRG00005003403)	NT5DC1 (ENSCPRG00005003414)	ENSCPRG00005003419	DSE (ENSCPRG00005003429)	CALHM6 (ENSCPRG00005003433) ##20	TRAPPC3L (ENSCPRG00005003437)	CALHM5 (ENSCPRG00005003444) ##20	ENSCPRG00005003445	CALHM4 (ENSCPRG00005003448) ##20	RWDD1 (ENSCPRG00005003459)	ENSCPRG00005003489	DHRS1 (ENSCPRG00005003677)	ZUP1 (ENSCPRG00005003679)	KPNA5 (ENSCPRG00005003739)	FAM162B (ENSCPRG00005004198)	GPRC6A (ENSCPRG00005004201)	RFX6 (ENSCPRG00005004215)	VGLL2 (ENSCPRG00005004268)	ROS1 (ENSCPRG00005004284)	DCBLD1 (ENSCPRG00005004302)	GOPC (ENSCPRG00005004309)	ENSCPRG00005004319	NUS1 (ENSCPRG00005004326)	SLC35F1 (ENSCPRG00005004339)
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000003880.b.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Theria	ANCESTRAL SPECIES	4	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000004692.d.b
Xenarthra	ANCESTRAL SPECIES	168											ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Sloth	MODERN SPECIES	6117															TRAPPC3L (ENSCHOG00000006361)	CALHM4 (ENSCHOG00000006372) ##20
Armadillo	MODERN SPECIES	2810				ENSDNOG00000047872	VWC2 (ENSDNOG00000024647)	ENSDNOG00000049577	FRK (ENSDNOG00000010080)	ENSDNOG00000007860	ENSDNOG00000030677	TSPYL4 (ENSDNOG00000042279)	ENSDNOG00000039632	ENSDNOG00000046391	DSE (ENSDNOG00000045714)	ENSDNOG00000045345 ##20	CALHM5 (ENSDNOG00000036788) ##20	CALHM4 (ENSDNOG00000007514) ##20	ENSDNOG00000007516	ENSDNOG00000044348	ENSDNOG00000039401	ENSDNOG00000038517	ENSDNOG00000025447	RSPH4A (ENSDNOG00000001347)	ZUP1 (ENSDNOG00000044598)	KPNA5 (ENSDNOG00000005326)	FAM162B (ENSDNOG00000038676)	GPRC6A (ENSDNOG00000019148)	RFX6 (ENSDNOG00000019162)	VGLL2 (ENSDNOG00000044127)	ROS1 (ENSDNOG00000010519)	DCBLD1 (ENSDNOG00000012574)	GOPC (ENSDNOG00000039802)
Afrotheria	ANCESTRAL SPECIES	13	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Tenrec	MODERN SPECIES	5654																CALHM4 (ENSETEG00000000014) ##20
Afrotheria_a	ANCESTRAL SPECIES	13	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Hyrax	MODERN SPECIES	6666													ENSPCAG00000004858 ##20	TRAPPC3L (ENSPCAG00000004945)	CALHM5 (ENSPCAG00000004982) ##20	CALHM4 (ENSPCAG00000005003) ##20	RWDD1 (ENSPCAG00000005016)
Elephant	MODERN SPECIES	1	FAM229B (ENSLAFG00000030627)	LAMA4 (ENSLAFG00000004076)	ENSLAFG00000029012	RFPL4B (ENSLAFG00000021578)	HDAC2 (ENSLAFG00000005566)	HS3ST5 (ENSLAFG00000010686)	FRK (ENSLAFG00000005589)	COL10A1 (ENSLAFG00000022123)	TSPYL4 (ENSLAFG00000010254)	ENSLAFG00000027418	DSE (ENSLAFG00000009134)	ENSLAFG00000012702 ##20	ENSLAFG00000017416 ##20	CALHM5 (ENSLAFG00000008490) ##20	TRAPPC3L (ENSLAFG00000008487)	CALHM4 (ENSLAFG00000027569) ##20	ENSLAFG00000008170	ENSLAFG00000026707	ENSLAFG00000028750	RSPH4A (ENSLAFG00000003514)	ZUP1 (ENSLAFG00000017345)	KPNA5 (ENSLAFG00000003824)	FAM162B (ENSLAFG00000003827)	GPRC6A (ENSLAFG00000003462)	RFX6 (ENSLAFG00000003465)	VGLL2 (ENSLAFG00000009803)	ROS1 (ENSLAFG00000009804)	DCBLD1 (ENSLAFG00000009399)	GOPC (ENSLAFG00000007801)	ENSLAFG00000025930	NUS1 (ENSLAFG00000016764)
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00990000213455	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234610.b.b ##20
Hedgehog	MODERN SPECIES	5813																CALHM4 (ENSEEUG00000003210) ##20
Common shrew	MODERN SPECIES	12004																CALHM4 (ENSSARG00000011531) ##20
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Suina	ANCESTRAL SPECIES	18	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000013639	ENSGT00940000161538	ENSGT00950000183068.b	ENSGT00390000000155.b	ENSGT00950000183134.c.a.b	ENSGT00390000007224.a	ENSGT00390000000509	ENSGT00390000016421.b.b	ENSGT00390000003986	ENSGT00940000154868.a.a	ENSGT00940000156277	ENSGT00940000157191	ENSGT00940000156533.b	ENSGT00950000182984.a	ENSGT01050000244838.D
Pig	MODERN SPECIES		ENSSSCG00000043946	ENSSSCG00000047473	MARCKS (ENSSSCG00000037803)	HDAC2 (ENSSSCG00000004432)	HS3ST5 (ENSSSCG00000004433)	ENSSSCG00000042456	FRK (ENSSSCG00000004434)	NT5DC1 (ENSSSCG00000004435)	COL10A1 (ENSSSCG00000004436)	TSPYL4 (ENSSSCG00000047800)	TSPYL1 (ENSSSCG00000004438)	DSE (ENSSSCG00000004441)	CALHM6 (ENSSSCG00000036064) ##20	TRAPPC3L (ENSSSCG00000040660)	CALHM5 (ENSSSCG00000031898) ##20	CALHM4 (ENSSSCG00000004445) ##20	ENSSSCG00000004446	ENSSSCG00000025656	ENSSSCG00000023415	ENSSSCG00000043963	ENSSSCG00000040797	LGSN (ENSSSCG00000004450)	RIPPLY2 (ENSSSCG00000062898)	SNAP91 (ENSSSCG00000004453)	PRSS35 (ENSSSCG00000004452)	ME1 (ENSSSCG00000004454)	RWDD2A (ENSSSCG00000029129)	PGM3 (ENSSSCG00000004456)	DOP1A (ENSSSCG00000004457)	UBE3D (ENSSSCG00000026346)	ENSSSCG00000053568
Chacoan peccary	MODERN SPECIES	61	MARCKS (ENSCWAG00000008550)	ENSCWAG00000008580	HDAC2 (ENSCWAG00000008651)	HS3ST5 (ENSCWAG00000008713)	FRK (ENSCWAG00000008748)	NT5DC1 (ENSCWAG00000008856)	COL10A1 (ENSCWAG00000008896)	ENSCWAG00000008941	ENSCWAG00000008967	TSPYL4 (ENSCWAG00000009011)	TSPYL1 (ENSCWAG00000009025)	DSE (ENSCWAG00000009050)	CALHM6 (ENSCWAG00000009128) ##20	TRAPPC3L (ENSCWAG00000009152)	CALHM5 (ENSCWAG00000009224) ##20	CALHM4 (ENSCWAG00000009259) ##20	RWDD1 (ENSCWAG00000009319)	LGSN (ENSCWAG00000009373)	ENSCWAG00000009512	SNAP91 (ENSCWAG00000009617)	PRSS35 (ENSCWAG00000010881)	ME1 (ENSCWAG00000010897)	RWDD2A (ENSCWAG00000010932)	PGM3 (ENSCWAG00000010966)	DOP1A (ENSCWAG00000011136)	UBE3D (ENSCWAG00000011379)	TPBG (ENSCWAG00000012210)	IBTK (ENSCWAG00000012235)	TENT5A (ENSCWAG00000012430)	BCKDHB (ENSCWAG00000012495)	ENSCWAG00000012547
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Camelidae	ANCESTRAL SPECIES	26	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223	ENSGT00940000162914	ENSGT00390000015655.b
Arabian camel	MODERN SPECIES	34	ENSCDRG00005003222	MARCKS (ENSCDRG00005003193)	ENSCDRG00005003186	HDAC2 (ENSCDRG00005003171)	HS3ST5 (ENSCDRG00005003162)	FRK (ENSCDRG00005003143)	ENSCDRG00005003130	COL10A1 (ENSCDRG00005003121)	NT5DC1 (ENSCDRG00005003104)	TSPYL4 (ENSCDRG00005003098)	TSPYL1 (ENSCDRG00005003092)	DSE (ENSCDRG00005003068)	CALHM6 (ENSCDRG00005003016) ##20	CALHM5 (ENSCDRG00005003006) ##20	TRAPPC3L (ENSCDRG00005002989)	CALHM4 (ENSCDRG00005002979) ##20	RWDD1 (ENSCDRG00005002965)	ENSCDRG00005002955	RSPH4A (ENSCDRG00005002922)	ZUP1 (ENSCDRG00005002876)	KPNA5 (ENSCDRG00005002825)	FAM162B (ENSCDRG00005002796)	GPRC6A (ENSCDRG00005002744)	RFX6 (ENSCDRG00005002698)	ENSCDRG00005002682	ROS1 (ENSCDRG00005002608)	DCBLD1 (ENSCDRG00005002557)	GOPC (ENSCDRG00005002474)	ENSCDRG00005002449	ENSCDRG00005002434	NUS1 (ENSCDRG00005002419)
Alpaca	MODERN SPECIES	2547													ENSVPAG00000002185 ##20	TRAPPC3L (ENSVPAG00000002186)	CALHM5 (ENSVPAG00000002187) ##20	CALHM4 (ENSVPAG00000002188) ##20	RWDD1 (ENSVPAG00000002189)	RSPH4A (ENSVPAG00000002191)	ZUP1 (ENSVPAG00000002192)	KPNA5 (ENSVPAG00000002193)	FAM162B (ENSVPAG00000002195)	GPRC6A (ENSVPAG00000002197)	RFX6 (ENSVPAG00000002198)	DCBLD1 (ENSVPAG00000002199)	GOPC (ENSVPAG00000002203)	NUS1 (ENSVPAG00000002205)
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00940000155203.c.a.a.b
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00940000155725	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.fb.a	ENSGT00940000155203.c.a.a.b
Sperm whale	MODERN SPECIES	1	RFPL4B (ENSPCTG00005014764)	MARCKS (ENSPCTG00005014735)	HDAC2 (ENSPCTG00005014660)	ENSPCTG00005014592	HS3ST5 (ENSPCTG00005014555)	ENSPCTG00005014516	FRK (ENSPCTG00005014412)	COL10A1 (ENSPCTG00005014373)	NT5DC1 (ENSPCTG00005014318)	TSPYL4 (ENSPCTG00005014296)	TSPYL1 (ENSPCTG00005014244)	DSE (ENSPCTG00005014130)	CALHM6 (ENSPCTG00005014068) ##20	ENSPCTG00005014023	CALHM5 (ENSPCTG00005013991) ##20	CALHM4 (ENSPCTG00005013957) ##20	RWDD1 (ENSPCTG00005013868)	ENSPCTG00005013836	RSPH4A (ENSPCTG00005013636)	ZUP1 (ENSPCTG00005013556)	KPNA5 (ENSPCTG00005013498)	ENSPCTG00005013476	ENSPCTG00005013422	GPRC6A (ENSPCTG00005013287)	RFX6 (ENSPCTG00005013021)	VGLL2 (ENSPCTG00005012958)	ROS1 (ENSPCTG00005012163)	DCBLD1 (ENSPCTG00005011969)	GOPC (ENSPCTG00005011840)	ENSPCTG00005011801	NUS1 (ENSPCTG00005011761)
Pecora	ANCESTRAL SPECIES	19	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT01030000235179	ENSGT00390000015655.b
Yarkand deer	MODERN SPECIES	20	FAM229B (ENSCHYG00000024251)	LAMA4 (ENSCHYG00000023891)	MARCKS (ENSCHYG00000023854)	ENSCHYG00000023836	ENSCHYG00000023650	HS3ST5 (ENSCHYG00000023609)	FRK (ENSCHYG00000023541)	COL10A1 (ENSCHYG00000023514)	NT5DC1 (ENSCHYG00000023450)	TSPYL4 (ENSCHYG00000023428)	ENSCHYG00000023415	ENSCHYG00000023336	CALHM6 (ENSCHYG00000023311) ##20	CALHM5 (ENSCHYG00000023274) ##20	TRAPPC3L (ENSCHYG00000023206)	CALHM4 (ENSCHYG00000023149) ##20	ENSCHYG00000023080	ENSCHYG00000023038	RSPH4A (ENSCHYG00000022831)	ZUP1 (ENSCHYG00000022708)	KPNA5 (ENSCHYG00000022607)	FAM162B (ENSCHYG00000022579)	RFX6 (ENSCHYG00000022453)	ENSCHYG00000022426	ROS1 (ENSCHYG00000021945)	DCBLD1 (ENSCHYG00000021744)	GOPC (ENSCHYG00000021189)	ENSCHYG00000021123	ENSCHYG00000021027	ENSCHYG00000020966	SLC35F1 (ENSCHYG00000020751)
Percora_a	ANCESTRAL SPECIES	21	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00390000009168.v.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT01030000235179
Bovinae	ANCESTRAL SPECIES	31	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Bos	ANCESTRAL SPECIES	19	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Bos_b	ANCESTRAL SPECIES	24	ENSGT00940000155723.c	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.r	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Cow	MODERN SPECIES	28	FAM229B (ENSBTAG00000033429)	LAMA4 (ENSBTAG00000008817)	MARCKS (ENSBTAG00000002082)	HDAC2 (ENSBTAG00000011849)	ENSBTAG00000049305	HS3ST5 (ENSBTAG00000000188)	FRK (ENSBTAG00000020018)	COL10A1 (ENSBTAG00000003078)	NT5DC1 (ENSBTAG00000003076)	TSPYL4 (ENSBTAG00000009127)	TSPYL1 (ENSBTAG00000010885)	DSE (ENSBTAG00000005205)	CALHM6 (ENSBTAG00000006549) ##20	CALHM5 (ENSBTAG00000045879) ##20	TRAPPC3L (ENSBTAG00000033554)	CALHM4 (ENSBTAG00000033535) ##20	RWDD1 (ENSBTAG00000009689)	SULT1C4 (ENSBTAG00000026672)	ENSBTAG00000050815	RSPH4A (ENSBTAG00000011890)	ZUP1 (ENSBTAG00000003878)	KPNA5 (ENSBTAG00000026673)	FAM162B (ENSBTAG00000033460)	RFX6 (ENSBTAG00000000264)	VGLL2 (ENSBTAG00000046282)	ROS1 (ENSBTAG00000047600)	DCBLD1 (ENSBTAG00000047338)	GOPC (ENSBTAG00000016046)	NEPN (ENSBTAG00000039574)	NUS1 (ENSBTAG00000053374)	SLC35F1 (ENSBTAG00000033657)
Hybrid Bos Indicus	MODERN SPECIES	28	LAMA4 (ENSBIXG00005009675)	ENSBIXG00005009782	MARCKS (ENSBIXG00005005803)	ENSBIXG00005009805	HDAC2 (ENSBIXG00005005946)	HS3ST5 (ENSBIXG00005000647)	FRK (ENSBIXG00005009902)	COL10A1 (ENSBIXG00005009915)	NT5DC1 (ENSBIXG00005009924)	TSPYL4 (ENSBIXG00005009942)	ENSBIXG00005009950	DSE (ENSBIXG00005009989)	CALHM6 (ENSBIXG00005010017) ##20	CALHM5 (ENSBIXG00005000765) ##20	TRAPPC3L (ENSBIXG00005010050)	CALHM4 (ENSBIXG00005010065) ##20	ENSBIXG00005006416	ENSBIXG00005010118	ENSBIXG00005010142	RSPH4A (ENSBIXG00005010221)	ZUP1 (ENSBIXG00005010258)	KPNA5 (ENSBIXG00005000829)	FAM162B (ENSBIXG00005010298)	RFX6 (ENSBIXG00005010323)	VGLL2 (ENSBIXG00005010356)	ROS1 (ENSBIXG00005010381)	DCBLD1 (ENSBIXG00005000746)	GOPC (ENSBIXG00005010544)	ENSBIXG00005000708	NUS1 (ENSBIXG00005000685)	ENSBIXG00005010607
Bos_a	ANCESTRAL SPECIES	18	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Wild yak	MODERN SPECIES	855														CALHM5 (ENSBMUG00000021569) ##20	TRAPPC3L (ENSBMUG00000021553)	CALHM4 (ENSBMUG00000021540) ##20	RWDD1 (ENSBMUG00000021530)	ENSBMUG00000021521	ENSBMUG00000021516	RSPH4A (ENSBMUG00000021494)	ZUP1 (ENSBMUG00000021452)	KPNA5 (ENSBMUG00000021424)	FAM162B (ENSBMUG00000021406)	RFX6 (ENSBMUG00000021385)
Domestic yak	MODERN SPECIES	1	ENSBGRG00000013479	ENSBGRG00000013503	ENSBGRG00000013525	MARCKS (ENSBGRG00000013546)	HDAC2 (ENSBGRG00000013629)	HS3ST5 (ENSBGRG00000013854)	FRK (ENSBGRG00000005311)	NT5DC1 (ENSBGRG00000005373)	COL10A1 (ENSBGRG00000005476)	TSPYL4 (ENSBGRG00000005502)	ENSBGRG00000005510	DSE (ENSBGRG00000005532)	CALHM6 (ENSBGRG00000005600) ##20	TRAPPC3L (ENSBGRG00000005625)	CALHM5 (ENSBGRG00000005669) ##20	CALHM4 (ENSBGRG00000005714) ##20	RWDD1 (ENSBGRG00000005754)	ENSBGRG00000005844	RSPH4A (ENSBGRG00000005878)	ZUP1 (ENSBGRG00000005961)	KPNA5 (ENSBGRG00000006026)	FAM162B (ENSBGRG00000006132)	RFX6 (ENSBGRG00000006177)	VGLL2 (ENSBGRG00000006319)	ROS1 (ENSBGRG00000006479)	ENSBGRG00000006843	ENSBGRG00000006862	DCBLD1 (ENSBGRG00000006916)	GOPC (ENSBGRG00000007399)	ENSBGRG00000007720	NUS1 (ENSBGRG00000007754)
American bison	MODERN SPECIES	3332	ENSBBBG00000009506	GINS3 (ENSBBBG00000009512)	NDRG4 (ENSBBBG00000009621)	SETD6 (ENSBBBG00000009667)	CNOT1 (ENSBBBG00000009711)	SLC38A7 (ENSBBBG00000009730)	GOT2 (ENSBBBG00000009736)	COL10A1 (ENSBBBG00000009745)	NT5DC1 (ENSBBBG00000009754)	TSPYL4 (ENSBBBG00000009756)	ENSBBBG00000009757	DSE (ENSBBBG00000009038)	ENSBBBG00000009766 ##20	CALHM5 (ENSBBBG00000001616) ##20	TRAPPC3L (ENSBBBG00000009772)	CALHM4 (ENSBBBG00000009776) ##20	ENSBBBG00000009781	RSPH4A (ENSBBBG00000009798)	ZUP1 (ENSBBBG00000009809)	KPNA5 (ENSBBBG00000009821)	FAM162B (ENSBBBG00000009824)	RFX6 (ENSBBBG00000009832)	VGLL2 (ENSBBBG00000009836)	ROS1 (ENSBBBG00000009903)	DCBLD1 (ENSBBBG00000001665)	GOPC (ENSBBBG00000009979)	ENSBBBG00000009991	NUS1 (ENSBBBG00000009996)	SLC35F1 (ENSBBBG00000010003)	PLN (ENSBBBG00000010007)	CEP85L (ENSBBBG00000010017)
Caprinae	ANCESTRAL SPECIES	33	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.a.b	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT01030000235179	ENSGT00390000015655.b
Goat	MODERN SPECIES	28	TUBE1 (ENSCHIG00000020635)	FAM229B (ENSCHIG00000018398)	LAMA4 (ENSCHIG00000019560)	MARCKS (ENSCHIG00000009392)	HDAC2 (ENSCHIG00000024213)	HS3ST5 (ENSCHIG00000019513)	FRK (ENSCHIG00000006701)	COL10A1 (ENSCHIG00000008425)	NT5DC1 (ENSCHIG00000025209)	TSPYL1 (ENSCHIG00000013019)	DSE (ENSCHIG00000010064)	ENSCHIG00000025860 ##20	ENSCHIG00000022717 ##20	CALHM5 (ENSCHIG00000018702) ##20	TRAPPC3L (ENSCHIG00000021481)	CALHM4 (ENSCHIG00000006125) ##20	ENSCHIG00000020636	ENSCHIG00000014681	RSPH4A (ENSCHIG00000022737)	ZUP1 (ENSCHIG00000022998)	FAM162B (ENSCHIG00000013451)	KPNA5 (ENSCHIG00000025297)	RFX6 (ENSCHIG00000021570)	VGLL2 (ENSCHIG00000014445)	ROS1 (ENSCHIG00000016323)	ENSCHIG00000010524	GOPC (ENSCHIG00000017940)	ENSCHIG00000018408	ENSCHIG00000025425	ENSCHIG00000010902	SLC35F1 (ENSCHIG00000020935)
Rambouillet Sheep	MODERN SPECIES	24	FAM229B (ENSOARG00020005460)	LAMA4 (ENSOARG00020005126)	MARCKS (ENSOARG00020005081)	HDAC2 (ENSOARG00020004977)	HS3ST5 (ENSOARG00020004941)	ENSOARG00020004910	FRK (ENSOARG00020004867)	COL10A1 (ENSOARG00020004849)	NT5DC1 (ENSOARG00020004710)	ENSOARG00020004693	ENSOARG00020004681	TSPYL1 (ENSOARG00020004668)	DSE (ENSOARG00020004597)	CALHM5 (ENSOARG00020004537) ##20	TRAPPC3L (ENSOARG00020004501)	CALHM4 (ENSOARG00020004478) ##20	ENSOARG00020004445	ENSOARG00020004418	ZUP1 (ENSOARG00020004156)	KPNA5 (ENSOARG00020004060)	FAM162B (ENSOARG00020004032)	RFX6 (ENSOARG00020003959)	VGLL2 (ENSOARG00020003907)	ROS1 (ENSOARG00020003121)	DCBLD1 (ENSOARG00020023381)	GOPC (ENSOARG00020023190)	ENSOARG00020023154	NUS1 (ENSOARG00020023137)	ENSOARG00020023109	SLC35F1 (ENSOARG00020023042)	PLN (ENSOARG00020023014)
Siberian musk deer	MODERN SPECIES	55	ENSMMSG00000004892	HS3ST5 (ENSMMSG00000004861)	ENSMMSG00000004852	ENSMMSG00000004842	ENSMMSG00000004817	ENSMMSG00000004714	FRK (ENSMMSG00000004640)	COL10A1 (ENSMMSG00000004611)	NT5DC1 (ENSMMSG00000004536)	TSPYL4 (ENSMMSG00000004521)	TSPYL1 (ENSMMSG00000004513)	DSE (ENSMMSG00000004477)	CALHM6 (ENSMMSG00000004443) ##20	CALHM5 (ENSMMSG00000004430) ##20	TRAPPC3L (ENSMMSG00000004425)	CALHM4 (ENSMMSG00000004408) ##20	ENSMMSG00000004377	ENSMMSG00000004355	ENSMMSG00000004337	RSPH4A (ENSMMSG00000004275)	ZUP1 (ENSMMSG00000004239)	KPNA5 (ENSMMSG00000004217)	FAM162B (ENSMMSG00000004205)	RFX6 (ENSMMSG00000004143)	VGLL2 (ENSMMSG00000004130)	ROS1 (ENSMMSG00000003965)	DCBLD1 (ENSMMSG00000003913)	GOPC (ENSMMSG00000003874)	ENSMMSG00000003850	NUS1 (ENSMMSG00000003834)	ENSMMSG00000003828
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Equus	ANCESTRAL SPECIES	29	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.o	ENSGT00940000156772.p.a	ENSGT00940000156772.p.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Horse	MODERN SPECIES	1	MARCKS (ENSECAG00000003398)	ENSECAG00000055511	HDAC2 (ENSECAG00000013577)	HS3ST5 (ENSECAG00000018033)	FRK (ENSECAG00000018039)	NT5DC1 (ENSECAG00000019833)	COL10A1 (ENSECAG00000020826)	TSPYL1 (ENSECAG00000003736)	TSPYL4 (ENSECAG00000030611)	ENSECAG00000031694	DSE (ENSECAG00000020975)	ENSECAG00000021708 ##20	ENSECAG00000051818	TRAPPC3L (ENSECAG00000021978)	CALHM5 (ENSECAG00000023268) ##20	CALHM4 (ENSECAG00000000714) ##20	RWDD1 (ENSECAG00000006587)	ENSECAG00000051393	ENSECAG00000010770	ENSECAG00000044333	RSPH4A (ENSECAG00000012533)	ZUP1 (ENSECAG00000013523)	KPNA5 (ENSECAG00000014734)	FAM162B (ENSECAG00000019150)	GPRC6A (ENSECAG00000019182)	RFX6 (ENSECAG00000019804)	ROS1 (ENSECAG00000023669)	VGLL2 (ENSECAG00000022074)	DCBLD1 (ENSECAG00000007808)	GOPC (ENSECAG00000009566)	NEPN (ENSECAG00000010804)
Donkey	MODERN SPECIES	16	LAMA4 (ENSEASG00005008172)	RFPL4B (ENSEASG00005038508)	MARCKS (ENSEASG00005008354)	HDAC2 (ENSEASG00005008358)	ENSEASG00005029672	HS3ST5 (ENSEASG00005033931)	FRK (ENSEASG00005008367)	NT5DC1 (ENSEASG00005008369)	COL10A1 (ENSEASG00005008370)	TSPYL4 (ENSEASG00005008371)	TSPYL1 (ENSEASG00005032253)	DSE (ENSEASG00005008373)	ENSEASG00005008375 ##20	TRAPPC3L (ENSEASG00005029591)	CALHM5 (ENSEASG00005008378) ##20	CALHM4 (ENSEASG00005008379) ##20	RWDD1 (ENSEASG00005008380)	ENSEASG00005008382	ENSEASG00005031003	ENSEASG00005028545	ENSEASG00005009048	RSPH4A (ENSEASG00005009050)	ZUP1 (ENSEASG00005009054)	KPNA5 (ENSEASG00005009059)	FAM162B (ENSEASG00005034252)	GPRC6A (ENSEASG00005009064)	RFX6 (ENSEASG00005009070)	ENSEASG00005037022	VGLL2 (ENSEASG00005009087)	ROS1 (ENSEASG00005009099)	DCBLD1 (ENSEASG00005009128)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Greater horseshoe bat	MODERN SPECIES	21	TUBE1 (ENSRFEG00010016655)	FAM229B (ENSRFEG00010016724)	LAMA4 (ENSRFEG00010016795)	RFPL4B (ENSRFEG00010016880)	MARCKS (ENSRFEG00010016931)	HDAC2 (ENSRFEG00010016988)	HS3ST5 (ENSRFEG00010017069)	ENSRFEG00010017121	FRK (ENSRFEG00010017139)	NT5DC1 (ENSRFEG00010017166)	COL10A1 (ENSRFEG00010017207)	DSE (ENSRFEG00010017346)	CALHM6 (ENSRFEG00010017443) ##20	TRAPPC3L (ENSRFEG00010017466)	CALHM5 (ENSRFEG00010017554) ##20	CALHM4 (ENSRFEG00010017600) ##20	ENSRFEG00010017650	ENSRFEG00010017720	ENSRFEG00010017788	ENSRFEG00010017801	RSPH4A (ENSRFEG00010017838)	ZUP1 (ENSRFEG00010018008)	KPNA5 (ENSRFEG00010018178)	FAM162B (ENSRFEG00010018217)	RFX6 (ENSRFEG00010018276)	VGLL2 (ENSRFEG00010018446)	ROS1 (ENSRFEG00010018524)	ENSRFEG00010018893	DCBLD1 (ENSRFEG00010018940)	GOPC (ENSRFEG00010019030)	ENSRFEG00010019124
Microbat	MODERN SPECIES	994	KATNA1 (ENSMLUG00000002062)	GINM1 (ENSMLUG00000002059)	PPIL4 (ENSMLUG00000002766)	ZC3H12D (ENSMLUG00000029238)	TAB2 (ENSMLUG00000005344)	ENSMLUG00000023007	UST (ENSMLUG00000005127)	ENSMLUG00000008313	COL10A1 (ENSMLUG00000008338)	TSPYL4 (ENSMLUG00000015727)	TSPYL1 (ENSMLUG00000008370)	DSE (ENSMLUG00000002926)	CALHM6 (ENSMLUG00000002931) ##20	TRAPPC3L (ENSMLUG00000002941)	CALHM5 (ENSMLUG00000029405) ##20	CALHM4 (ENSMLUG00000011357) ##20	RWDD1 (ENSMLUG00000030427)	ENSMLUG00000024652	ENSMLUG00000028869	ENSMLUG00000030160	ENSMLUG00000029713	RSPH4A (ENSMLUG00000015892)	ZUP1 (ENSMLUG00000015906)	KPNA5 (ENSMLUG00000010070)	FAM162B (ENSMLUG00000010100)	GPRC6A (ENSMLUG00000010115)	RFX6 (ENSMLUG00000006665)	VGLL2 (ENSMLUG00000022632)	ROS1 (ENSMLUG00000007568)	DCBLD1 (ENSMLUG00000007533)	GOPC (ENSMLUG00000007543)
Megabat	MODERN SPECIES	2373														TRAPPC3L (ENSPVAG00000015120)	CALHM5 (ENSPVAG00000015121) ##20	CALHM4 (ENSPVAG00000015122) ##20	RWDD1 (ENSPVAG00000015124)
Carnivora	ANCESTRAL SPECIES	4	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Felidae	ANCESTRAL SPECIES	5	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Panthera	ANCESTRAL SPECIES	7	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Tiger	MODERN SPECIES	120	TUBE1 (ENSPTIG00000019262)	FAM229B (ENSPTIG00000019248)	LAMA4 (ENSPTIG00000017802)	RFPL4B (ENSPTIG00000006386)	ENSPTIG00000006376	HDAC2 (ENSPTIG00000017437)	HS3ST5 (ENSPTIG00000017379)	FRK (ENSPTIG00000017241)	COL10A1 (ENSPTIG00000016999)	NT5DC1 (ENSPTIG00000016386)	TSPYL4 (ENSPTIG00000006365)	DSE (ENSPTIG00000015410)	ENSPTIG00000015377 ##20	CALHM5 (ENSPTIG00000015346) ##20	TRAPPC3L (ENSPTIG00000015246)	CALHM4 (ENSPTIG00000015112) ##20	RWDD1 (ENSPTIG00000014973)	ENSPTIG00000014688	ENSPTIG00000014529	RSPH4A (ENSPTIG00000014297)	ZUP1 (ENSPTIG00000013533)	KPNA5 (ENSPTIG00000013503)	FAM162B (ENSPTIG00000013420)	GPRC6A (ENSPTIG00000013115)	RFX6 (ENSPTIG00000012468)	ENSPTIG00000012308	ROS1 (ENSPTIG00000011449)	DCBLD1 (ENSPTIG00000011183)	GOPC (ENSPTIG00000010692)	ENSPTIG00000010605	ENSPTIG00000010304
Panthera_a	ANCESTRAL SPECIES	4	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
leopard	MODERN SPECIES	246									NT5DC1 (ENSPPRG00000022632)	COL10A1 (ENSPPRG00000022643)	TSPYL4 (ENSPPRG00000011586)	DSE (ENSPPRG00000022657)	ENSPPRG00000022667 ##20	TRAPPC3L (ENSPPRG00000022673)	CALHM5 (ENSPPRG00000022680) ##20	CALHM4 (ENSPPRG00000022718) ##20	RWDD1 (ENSPPRG00000022725)	ENSPPRG00000022751
lion	MODERN SPECIES	5	ENSPLOG00000003271	MARCKS (ENSPLOG00000003280)	ENSPLOG00000003352	HDAC2 (ENSPLOG00000003360)	HS3ST5 (ENSPLOG00000003442)	FRK (ENSPLOG00000003455)	NT5DC1 (ENSPLOG00000003475)	ENSPLOG00000003489	COL10A1 (ENSPLOG00000003502)	TSPYL4 (ENSPLOG00000003518)	ENSPLOG00000003526	DSE (ENSPLOG00000003558)	CALHM6 (ENSPLOG00000003580) ##20	TRAPPC3L (ENSPLOG00000003593)	CALHM5 (ENSPLOG00000003609) ##20	CALHM4 (ENSPLOG00000003619) ##20	RWDD1 (ENSPLOG00000003637)	ENSPLOG00000003653	RSPH4A (ENSPLOG00000003687)	ZUP1 (ENSPLOG00000003730)	KPNA5 (ENSPLOG00000003759)	FAM162B (ENSPLOG00000003773)	GPRC6A (ENSPLOG00000003804)	RFX6 (ENSPLOG00000003852)	VGLL2 (ENSPLOG00000010770)	ROS1 (ENSPLOG00000011040)	DCBLD1 (ENSPLOG00000011135)	GOPC (ENSPLOG00000011210)	ENSPLOG00000011382	NUS1 (ENSPLOG00000011433)	SLC35F1 (ENSPLOG00000011485)
Cat	MODERN SPECIES	236	TUBE1 (ENSFCAG00000026151)	FAM229B (ENSFCAG00000030116)	LAMA4 (ENSFCAG00000006308)	MARCKS (ENSFCAG00000042952)	ENSFCAG00000051478	HDAC2 (ENSFCAG00000018836)	HS3ST5 (ENSFCAG00000000523)	FRK (ENSFCAG00000004043)	NT5DC1 (ENSFCAG00000013415)	COL10A1 (ENSFCAG00000040804)	TSPYL4 (ENSFCAG00000013418)	DSE (ENSFCAG00000023622)	ENSFCAG00000029592 ##20	TRAPPC3L (ENSFCAG00000021987)	CALHM5 (ENSFCAG00000033745) ##20	CALHM4 (ENSFCAG00000040211) ##20	RWDD1 (ENSFCAG00000025905)	ENSFCAG00000034736	ENSFCAG00000047240	ENSFCAG00000052457	RSPH4A (ENSFCAG00000027641)	ZUP1 (ENSFCAG00000031494)	KPNA5 (ENSFCAG00000023588)	FAM162B (ENSFCAG00000037427)	GPRC6A (ENSFCAG00000044183)	RFX6 (ENSFCAG00000018903)	VGLL2 (ENSFCAG00000043286)	ROS1 (ENSFCAG00000006448)	DCBLD1 (ENSFCAG00000013925)	GOPC (ENSFCAG00000025564)	NEPN (ENSFCAG00000025529)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Mustelinae	ANCESTRAL SPECIES	8	ENSGT00940000157472	ENSGT00730000111479.b	ENSGT00730000111479.a	ENSGT00940000153394.c.a.h	ENSGT00940000161251	ENSGT00390000000020.a	ENSGT00940000162458	ENSGT00390000014270	ENSGT00940000153189.C	ENSGT00940000156194	ENSGT00940000160379	ENSGT00940000159918.a.b	ENSGT00910000144115.a	ENSGT00940000153544.a.h	ENSGT00390000007975.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.d	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Ferret	MODERN SPECIES	166	PIM1 (ENSMPUG00000014123)	FGD2 (ENSMPUG00000014132)	MTCH1 (ENSMPUG00000014140)	ENSMPUG00000014147	C6orf89 (ENSMPUG00000014159)	ENSMPUG00000014162	ENSMPUG00000014166	CPNE5 (ENSMPUG00000014182)	ENSMPUG00000014185	ENSMPUG00000014188	CDKN1A (ENSMPUG00000014214)	SRSF3 (ENSMPUG00000014215)	STK38 (ENSMPUG00000014223)	KCTD20 (ENSMPUG00000014225)	ENSMPUG00000014227	CALHM4 (ENSMPUG00000014228) ##20	RWDD1 (ENSMPUG00000014229)	ENSMPUG00000014231	ENSMPUG00000014234	RSPH4A (ENSMPUG00000014235)	ZUP1 (ENSMPUG00000014237)	KPNA5 (ENSMPUG00000014242)	FAM162B (ENSMPUG00000014247)	GPRC6A (ENSMPUG00000014250)	RFX6 (ENSMPUG00000014252)	VGLL2 (ENSMPUG00000014293)	ROS1 (ENSMPUG00000014298)	DCBLD1 (ENSMPUG00000014308)	GOPC (ENSMPUG00000014330)	ENSMPUG00000014336	NUS1 (ENSMPUG00000014339)
American mink	MODERN SPECIES	87	TMEM217 (ENSNVIG00000013761)	ENSNVIG00000013767	PIM1 (ENSNVIG00000013770)	ENSNVIG00000013779	FGD2 (ENSNVIG00000013792)	MTCH1 (ENSNVIG00000013811)	PI16 (ENSNVIG00000013829)	C6orf89 (ENSNVIG00000013850)	PPIL1 (ENSNVIG00000013927)	ENSNVIG00000013937	RAB44 (ENSNVIG00000013952)	CDKN1A (ENSNVIG00000013965)	SRSF3 (ENSNVIG00000013970)	STK38 (ENSNVIG00000013983)	KCTD20 (ENSNVIG00000014004)	CALHM4 (ENSNVIG00000014037) ##20	RWDD1 (ENSNVIG00000014057)	ENSNVIG00000014068	ENSNVIG00000014096	ENSNVIG00000014118
Ursidae	ANCESTRAL SPECIES	22	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Ursus	ANCESTRAL SPECIES	45										ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000015655.b	ENSGT00390000002403
American black bear	MODERN SPECIES	6613														CALHM5 (ENSUAMG00000014967) ##20	TRAPPC3L (ENSUAMG00000014966)	CALHM4 (ENSUAMG00000014965) ##20
Polar bear	MODERN SPECIES	172						FRK (ENSUMAG00000004055)	ENSUMAG00000004050	COL10A1 (ENSUMAG00000004046)	NT5DC1 (ENSUMAG00000003847)	TSPYL4 (ENSUMAG00000003828)	TSPYL1 (ENSUMAG00000003820)	DSE (ENSUMAG00000003818)	ENSUMAG00000003807 ##20	CALHM5 (ENSUMAG00000003806) ##20	TRAPPC3L (ENSUMAG00000003801)	CALHM4 (ENSUMAG00000003797) ##20	RWDD1 (ENSUMAG00000003790)	ENSUMAG00000003779	ENSUMAG00000003759	ZUP1 (ENSUMAG00000003755)	KPNA5 (ENSUMAG00000003152)	FAM162B (ENSUMAG00000003081)	GPRC6A (ENSUMAG00000003068)	RFX6 (ENSUMAG00000003019)	ENSUMAG00000003008	ROS1 (ENSUMAG00000002961)	ENSUMAG00000002944	DCBLD1 (ENSUMAG00000002929)	GOPC (ENSUMAG00000002923)	ENSUMAG00000002918	SLC35F1 (ENSUMAG00000002903)
Giant Panda	MODERN SPECIES	1	LAMA4 (ENSAMEG00000016747)	RFPL4B (ENSAMEG00000019194)	ENSAMEG00000031393	ENSAMEG00000025271	HDAC2 (ENSAMEG00000013147)	HS3ST5 (ENSAMEG00000013224)	FRK (ENSAMEG00000013338)	NT5DC1 (ENSAMEG00000005670)	COL10A1 (ENSAMEG00000013356)	TSPYL4 (ENSAMEG00000019723)	TSPYL1 (ENSAMEG00000005672)	DSE (ENSAMEG00000005674)	CALHM6 (ENSAMEG00000005679) ##20	TRAPPC3L (ENSAMEG00000005682)	CALHM5 (ENSAMEG00000005685) ##20	CALHM4 (ENSAMEG00000005689) ##20	RWDD1 (ENSAMEG00000005692)	ENSAMEG00000005716	ENSAMEG00000005725	ENSAMEG00000023971	RSPH4A (ENSAMEG00000005736)	ZUP1 (ENSAMEG00000005752)	KPNA5 (ENSAMEG00000005775)	FAM162B (ENSAMEG00000005819)	GPRC6A (ENSAMEG00000005823)	RFX6 (ENSAMEG00000005843)	ENSAMEG00000005850	ROS1 (ENSAMEG00000005851)	DCBLD1 (ENSAMEG00000005509)	GOPC (ENSAMEG00000005518)	ENSAMEG00000005537
Canidae	ANCESTRAL SPECIES	34	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00940000162787	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017.ib	ENSGT00390000012017.hb	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Canis_lupus	ANCESTRAL SPECIES		ENSGT00950000185354	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00940000162787	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017.ib	ENSGT00390000012017.hb	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Dog	MODERN SPECIES		ENSCAFG00845004865	ENSCAFG00845004871	UNC93A (ENSCAFG00845004882)	ENSCAFG00845004891	ENSCAFG00845004971	ENSCAFG00845005088	FRMD1 (ENSCAFG00845005116)	DACT2 (ENSCAFG00845005143)	SMOC2 (ENSCAFG00845005168)	THBS2 (ENSCAFG00845005227)	ENSCAFG00845005366	DSE (ENSCAFG00845005500)	CALHM6 (ENSCAFG00845005516) ##20	TRAPPC3L (ENSCAFG00845005532)	CALHM5 (ENSCAFG00845005557) ##20	CALHM4 (ENSCAFG00845005573) ##20	RWDD1 (ENSCAFG00845005610)	ENSCAFG00845005641	RSPH4A (ENSCAFG00845005676)	ZUP1 (ENSCAFG00845005699)	KPNA5 (ENSCAFG00845005742)	FAM162B (ENSCAFG00845005779)	GPRC6A (ENSCAFG00845005820)	RFX6 (ENSCAFG00845005871)	VGLL2 (ENSCAFG00845005929)	ROS1 (ENSCAFG00845006019)	DCBLD1 (ENSCAFG00845006335)	GOPC (ENSCAFG00845006479)	NEPN (ENSCAFG00845006606)	NUS1 (ENSCAFG00845006635)	SLC35F1 (ENSCAFG00845006677)
Red fox	MODERN SPECIES	40									ENSVVUG00000016767	ENSVVUG00000016751	ENSVVUG00000016732	DSE (ENSVVUG00000016723)	CALHM6 (ENSVVUG00000016722) ##20	ENSVVUG00000016721	CALHM5 (ENSVVUG00000016720) ##20	CALHM4 (ENSVVUG00000016718) ##20	TRAPPC3L (ENSVVUG00000016711)	ENSVVUG00000016707	ENSVVUG00000016705	RSPH4A (ENSVVUG00000016700)	ZUP1 (ENSVVUG00000016696)	KPNA5 (ENSVVUG00000016678)	FAM162B (ENSVVUG00000016671)	GPRC6A (ENSVVUG00000016663)	RFX6 (ENSVVUG00000016613)	ENSVVUG00000016599	VGLL2 (ENSVVUG00000016593)	ROS1 (ENSVVUG00000015982)	DCBLD1 (ENSVVUG00000015933)	GOPC (ENSVVUG00000015918)	ENSVVUG00000015913
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Primates	ANCESTRAL SPECIES	5	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000159970	ENSGT00390000000970.b.n.a.b	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Marmoset	MODERN SPECIES	16	ENSCJAG00000071609	ENSCJAG00000050876	MARCKS (ENSCJAG00000063272)	HDAC2 (ENSCJAG00000004635)	HS3ST5 (ENSCJAG00000086455)	ENSCJAG00000067023	FRK (ENSCJAG00000004595)	TSPYL4 (ENSCJAG00000034803)	ENSCJAG00000047367	COL10A1 (ENSCJAG00000004589)	TSPYL1 (ENSCJAG00000040079)	DSE (ENSCJAG00000004530)	CALHM6 (ENSCJAG00000004524) ##20	TRAPPC3L (ENSCJAG00000004513)	CALHM5 (ENSCJAG00000059277) ##20	CALHM4 (ENSCJAG00000004499) ##20	ENSCJAG00000004474	RSPH4A (ENSCJAG00000004455)	ZUP1 (ENSCJAG00000004437)	KPNA5 (ENSCJAG00000004394)	ENSCJAG00000072141	FAM162B (ENSCJAG00000055731)	GPRC6A (ENSCJAG00000004373)	RFX6 (ENSCJAG00000004349)	VGLL2 (ENSCJAG00000004345)	ROS1 (ENSCJAG00000004286)	ENSCJAG00000070188	ENSCJAG00000004257	GOPC (ENSCJAG00000004242)	ENSCJAG00000033961	SLC35F1 (ENSCJAG00000004231)
Cebidae_a	ANCESTRAL SPECIES	26					ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000170327	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Bolivian squirrel monkey	MODERN SPECIES	145	ENSSBOG00000027906	ENSSBOG00000027531	ENSSBOG00000036394	ENSSBOG00000026123	HS3ST5 (ENSSBOG00000025511)	ENSSBOG00000025026	FRK (ENSSBOG00000024353)	COL10A1 (ENSSBOG00000022558)	ENSSBOG00000022050	ENSSBOG00000020743	ENSSBOG00000020332	DSE (ENSSBOG00000019590)	CALHM6 (ENSSBOG00000018753) ##20	CALHM5 (ENSSBOG00000014712) ##20	TRAPPC3L (ENSSBOG00000010873)	CALHM4 (ENSSBOG00000006032) ##20	RWDD1 (ENSSBOG00000029590)	RSPH4A (ENSSBOG00000027685)	ZUP1 (ENSSBOG00000023075)	KPNA5 (ENSSBOG00000020656)	FAM162B (ENSSBOG00000013087)	GPRC6A (ENSSBOG00000034356)	ENSSBOG00000031250	RFX6 (ENSSBOG00000029327)	ENSSBOG00000027243	ROS1 (ENSSBOG00000026173)	DCBLD1 (ENSSBOG00000023384)	GOPC (ENSSBOG00000021757)	ENSSBOG00000028014	NUS1 (ENSSBOG00000024151)	ENSSBOG00000022939
Capuchin	MODERN SPECIES	11							ENSCCAG00000001468	FRK (ENSCCAG00000025087)	COL10A1 (ENSCCAG00000032758)	NT5DC1 (ENSCCAG00000024638)	EIF3H (ENSCCAG00000033678)	DSE (ENSCCAG00000030876)	CALHM6 (ENSCCAG00000029008) ##20	CALHM5 (ENSCCAG00000021913) ##20	TRAPPC3L (ENSCCAG00000035786)	CALHM4 (ENSCCAG00000029702) ##20	RWDD1 (ENSCCAG00000027935)	RSPH4A (ENSCCAG00000007275)	ZUP1 (ENSCCAG00000025061)	KPNA5 (ENSCCAG00000022746)	FAM162B (ENSCCAG00000031118)	GPRC6A (ENSCCAG00000030003)	RFX6 (ENSCCAG00000019715)	VGLL2 (ENSCCAG00000028036)	ROS1 (ENSCCAG00000033956)	ENSCCAG00000027081	DCBLD1 (ENSCCAG00000025349)	ENSCCAG00000028924	ENSCCAG00000024292	NUS1 (ENSCCAG00000020694)	DYDC2 (ENSCCAG00000028493)
Mas night monkey	MODERN SPECIES	1107	MARCKS (ENSANAG00000023603)	ENSANAG00000004036	HDAC2 (ENSANAG00000034693)	ENSANAG00000018971	HS3ST5 (ENSANAG00000026473)	FRK (ENSANAG00000035872)	COL10A1 (ENSANAG00000028479)	ENSANAG00000031391	TSPYL1 (ENSANAG00000022346)	ENSANAG00000036796	DSE (ENSANAG00000038310)	CALHM6 (ENSANAG00000032722) ##20	CALHM5 (ENSANAG00000001421) ##20	ENSANAG00000030183	TRAPPC3L (ENSANAG00000026394)	CALHM4 (ENSANAG00000022923) ##20	RWDD1 (ENSANAG00000030086)	RSPH4A (ENSANAG00000020519)	ZUP1 (ENSANAG00000021756)	KPNA5 (ENSANAG00000009920)	FAM162B (ENSANAG00000023673)	GPRC6A (ENSANAG00000028734)	ENSANAG00000020549	RFX6 (ENSANAG00000035610)	VGLL2 (ENSANAG00000033765)	ROS1 (ENSANAG00000029743)	DCBLD1 (ENSANAG00000036214)	GOPC (ENSANAG00000032043)	ENSANAG00000031313	NUS1 (ENSANAG00000029458)
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00910000147104
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT01030000237275	ENSGT00910000147104
Rhinopithecus	ANCESTRAL SPECIES	472													ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b
Golden snub-nosed monkey	MODERN SPECIES	1726											DSE (ENSRROG00000033698)	ENSRROG00000022531	CALHM6 (ENSRROG00000024470) ##20	TRAPPC3L (ENSRROG00000036813)	CALHM5 (ENSRROG00000028944) ##20	CALHM4 (ENSRROG00000030193) ##20	RWDD1 (ENSRROG00000034466)	RSPH4A (ENSRROG00000034483)	ZUP1 (ENSRROG00000001608)	KPNA5 (ENSRROG00000007638)	FAM162B (ENSRROG00000002813)	GPRC6A (ENSRROG00000029975)	RFX6 (ENSRROG00000042517)
Black snub-nosed monkey	MODERN SPECIES	1771											DSE (ENSRBIG00000035087)	ENSRBIG00000001662	CALHM6 (ENSRBIG00000007538) ##20	CALHM5 (ENSRBIG00000027627) ##20	TRAPPC3L (ENSRBIG00000028722)	CALHM4 (ENSRBIG00000032541) ##20	ENSRBIG00000023199	RSPH4A (ENSRBIG00000033414)	ZUP1 (ENSRBIG00000042607)	KPNA5 (ENSRBIG00000029401)	FAM162B (ENSRBIG00000032712)	GPRC6A (ENSRBIG00000029856)	RFX6 (ENSRBIG00000044389)
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT01030000237275	ENSGT00910000147104
Vervet Monkey	MODERN SPECIES	4	ENSCSAG00000015668	RFPL4B (ENSCSAG00000018974)	MARCKS (ENSCSAG00000015680)	HDAC2 (ENSCSAG00000015692)	HS3ST5 (ENSCSAG00000015695)	FRK (ENSCSAG00000015700)	COL10A1 (ENSCSAG00000015703)	ENSCSAG00000015707	NT5DC1 (ENSCSAG00000015718)	TSPYL4 (ENSCSAG00000018973)	TSPYL1 (ENSCSAG00000018972)	DSE (ENSCSAG00000015723)	CALHM6 (ENSCSAG00000015726) ##20	CALHM5 (ENSCSAG00000015732) ##20	TRAPPC3L (ENSCSAG00000015735)	CALHM4 (ENSCSAG00000015763) ##20	RWDD1 (ENSCSAG00000015772)	RSPH4A (ENSCSAG00000015777)	ZUP1 (ENSCSAG00000015785)	KPNA5 (ENSCSAG00000015794)	FAM162B (ENSCSAG00000015801)	GPRC6A (ENSCSAG00000015844)	RFX6 (ENSCSAG00000015856)	VGLL2 (ENSCSAG00000015869)	ROS1 (ENSCSAG00000015976)	DCBLD1 (ENSCSAG00000016039)	GOPC (ENSCSAG00000016048)	NUS1 (ENSCSAG00000016053)	SLC35F1 (ENSCSAG00000016059)	PLN (ENSCSAG00000018971)	CEP85L (ENSCSAG00000016067)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT01030000237275	ENSGT00910000147104
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.r	ENSGT00940000162991	ENSGT00940000162821	ENSGT00860000136122	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Olive baboon	MODERN SPECIES	16	HDAC2 (ENSPANG00000004969)	HS3ST5 (ENSPANG00000020863)	ENSPANG00000039146	ENSPANG00000045691	FRK (ENSPANG00000015735)	COL10A1 (ENSPANG00000022055)	NT5DC1 (ENSPANG00000024103)	TSPYL4 (ENSPANG00000035333)	TSPYL1 (ENSPANG00000007994)	ENSPANG00000044294	DSE (ENSPANG00000000826)	ENSPANG00000044624	CALHM6 (ENSPANG00000038049) ##20	CALHM5 (ENSPANG00000006250) ##20	TRAPPC3L (ENSPANG00000024071)	CALHM4 (ENSPANG00000013290) ##20	RWDD1 (ENSPANG00000008148)	RSPH4A (ENSPANG00000006886)	ZUP1 (ENSPANG00000021725)	KPNA5 (ENSPANG00000008670)	FAM162B (ENSPANG00000022513)	GPRC6A (ENSPANG00000024072)	RFX6 (ENSPANG00000008240)	VGLL2 (ENSPANG00000016788)	ROS1 (ENSPANG00000022514)	ENSPANG00000049743	DCBLD1 (ENSPANG00000017288)	GOPC (ENSPANG00000020085)	ENSPANG00000042149	NUS1 (ENSPANG00000006888)	SLC35F1 (ENSPANG00000018515)
Cercopithecinae_d	ANCESTRAL SPECIES	70	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00860000136122	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Sooty mangabey	MODERN SPECIES	590	ENSCATG00000002853	ENSCATG00000033527	ENSCATG00000023134	MARCKS (ENSCATG00000009912)	HDAC2 (ENSCATG00000042591)	HS3ST5 (ENSCATG00000028503)	FRK (ENSCATG00000039585)	NT5DC1 (ENSCATG00000021794)	COL10A1 (ENSCATG00000019945)	TSPYL4 (ENSCATG00000041203)	ENSCATG00000043899	DSE (ENSCATG00000039900)	CALHM6 (ENSCATG00000041474) ##20	TRAPPC3L (ENSCATG00000039208)	CALHM5 (ENSCATG00000013734) ##20	CALHM4 (ENSCATG00000022187) ##20	RWDD1 (ENSCATG00000030010)	RSPH4A (ENSCATG00000031193)	ZUP1 (ENSCATG00000042362)	KPNA5 (ENSCATG00000034707)	FAM162B (ENSCATG00000031733)	GPRC6A (ENSCATG00000038791)	RFX6 (ENSCATG00000034545)	VGLL2 (ENSCATG00000038510)	ROS1 (ENSCATG00000021312)	ENSCATG00000022159	DCBLD1 (ENSCATG00000033783)	GOPC (ENSCATG00000037476)	NUS1 (ENSCATG00000039106)	SLC35F1 (ENSCATG00000039775)	CEP85L (ENSCATG00000040491)
Drill	MODERN SPECIES	1413									NT5DC1 (ENSMLEG00000035573)	TSPYL4 (ENSMLEG00000036698)	ENSMLEG00000032841	DSE (ENSMLEG00000028071)	CALHM6 (ENSMLEG00000041324) ##20	TRAPPC3L (ENSMLEG00000028506)	CALHM5 (ENSMLEG00000035316) ##20	CALHM4 (ENSMLEG00000032140) ##20	RWDD1 (ENSMLEG00000011284)	RSPH4A (ENSMLEG00000000631)	ZUP1 (ENSMLEG00000033401)	KPNA5 (ENSMLEG00000041216)	FAM162B (ENSMLEG00000039589)	GPRC6A (ENSMLEG00000033168)	RFX6 (ENSMLEG00000033029)	ENSMLEG00000030294	ROS1 (ENSMLEG00000029082)	DCBLD1 (ENSMLEG00000040426)	GOPC (ENSMLEG00000026392)	NUS1 (ENSMLEG00000035527)	SLC35F1 (ENSMLEG00000012171)	ENSMLEG00000003959	ENSMLEG00000027628
Macaca	ANCESTRAL SPECIES	9	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00910000147104	ENSGT00620000087993.a.a
Pig-tailed macaque	MODERN SPECIES	342							FRK (ENSMNEG00000042618)	NT5DC1 (ENSMNEG00000029093)	COL10A1 (ENSMNEG00000021680)	TSPYL4 (ENSMNEG00000028445)	ENSMNEG00000031556	DSE (ENSMNEG00000028181)	CALHM6 (ENSMNEG00000044903) ##20	TRAPPC3L (ENSMNEG00000045331)	CALHM5 (ENSMNEG00000044741) ##20	CALHM4 (ENSMNEG00000029150) ##20	RWDD1 (ENSMNEG00000045094)	RSPH4A (ENSMNEG00000038377)	ZUP1 (ENSMNEG00000031978)	KPNA5 (ENSMNEG00000033544)	FAM162B (ENSMNEG00000032267)	GPRC6A (ENSMNEG00000035336)	RFX6 (ENSMNEG00000037412)	VGLL2 (ENSMNEG00000034485)	ROS1 (ENSMNEG00000044781)	DCBLD1 (ENSMNEG00000045089)	GOPC (ENSMNEG00000041231)	NUS1 (ENSMNEG00000013910)	SLC35F1 (ENSMNEG00000032478)	ENSMNEG00000024765	CEP85L (ENSMNEG00000038639)
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00960000190362.E.b	ENSGT00950000183105.A.m.a.r.j.a	ENSGT00390000012138.a.a.j.b	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000004692.d.b
Crab-eating macaque	MODERN SPECIES	14	ENSMFAG00000064818	ENSMFAG00000031632	ENSMFAG00000018794	ENSMFAG00000052224	HDAC2 (ENSMFAG00000040542)	HS3ST5 (ENSMFAG00000061930)	ENSMFAG00000063529	ENSMFAG00000047737	FRK (ENSMFAG00000000665)	NT5DC1 (ENSMFAG00000038038)	COL10A1 (ENSMFAG00000038014)	DSE (ENSMFAG00000033289)	CALHM6 (ENSMFAG00000041853) ##20	TRAPPC3L (ENSMFAG00000055248)	CALHM5 (ENSMFAG00000052041) ##20	ENSMFAG00000033309 ##20	RWDD1 (ENSMFAG00000042598)	RSPH4A (ENSMFAG00000038872)	ZUP1 (ENSMFAG00000001086)	KPNA5 (ENSMFAG00000038991)	FAM162B (ENSMFAG00000050195)	GPRC6A (ENSMFAG00000037810)	RFX6 (ENSMFAG00000000913)	ENSMFAG00000039023	ROS1 (ENSMFAG00000001072)	DCBLD1 (ENSMFAG00000033065)	GOPC (ENSMFAG00000032714)	ENSMFAG00000063596	NUS1 (ENSMFAG00000051605)	SLC35F1 (ENSMFAG00000043289)	CEP85L (ENSMFAG00000000904)
Rhesus	MODERN SPECIES	14	ENSMMUG00000061031	ENSMMUG00000001200	MARCKS (ENSMMUG00000008934)	HDAC2 (ENSMMUG00000008937)	HS3ST5 (ENSMMUG00000050295)	ENSMMUG00000057271	FRK (ENSMMUG00000014635)	NT5DC1 (ENSMMUG00000014638)	COL10A1 (ENSMMUG00000063074)	TSPYL4 (ENSMMUG00000014643)	ENSMMUG00000054037	TSPYL1 (ENSMMUG00000061148)	DSE (ENSMMUG00000007409)	TRAPPC3L (ENSMMUG00000007413)	CALHM5 (ENSMMUG00000007412) ##20	CALHM4 (ENSMMUG00000007414) ##20	RWDD1 (ENSMMUG00000007415)	RSPH4A (ENSMMUG00000001805)	ZUP1 (ENSMMUG00000001806)	KPNA5 (ENSMMUG00000048955)	FAM162B (ENSMMUG00000050688)	GPRC6A (ENSMMUG00000003072)	RFX6 (ENSMMUG00000017189)	VGLL2 (ENSMMUG00000023737)	ROS1 (ENSMMUG00000023738)	DCBLD1 (ENSMMUG00000017558)	NUS1 (ENSMMUG00000059327)	ENSMMUG00000053187	SLC35F1 (ENSMMUG00000022354)	CEP85L (ENSMMUG00000022184)	ENSMMUG00000055852
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00910000147104
Gibbon	MODERN SPECIES	18	LAMA4 (ENSNLEG00000013000)	MARCKS (ENSNLEG00000034431)	HDAC2 (ENSNLEG00000013058)	HS3ST5 (ENSNLEG00000013070)	FRK (ENSNLEG00000013075)	NT5DC1 (ENSNLEG00000013080)	COL10A1 (ENSNLEG00000013102)	TSPYL4 (ENSNLEG00000013105)	ENSNLEG00000018478	TSPYL1 (ENSNLEG00000019148)	DSE (ENSNLEG00000013106)	ENSNLEG00000032216	CALHM6 (ENSNLEG00000013120) ##20	TRAPPC3L (ENSNLEG00000013121)	CALHM5 (ENSNLEG00000013129) ##20	CALHM4 (ENSNLEG00000028191) ##20	RWDD1 (ENSNLEG00000013133)	RSPH4A (ENSNLEG00000013151)	ZUP1 (ENSNLEG00000013173)	KPNA5 (ENSNLEG00000013209)	ENSNLEG00000013253	ENSNLEG00000013257	RFX6 (ENSNLEG00000013258)	VGLL2 (ENSNLEG00000013293)	ROS1 (ENSNLEG00000013311)	DCBLD1 (ENSNLEG00000013410)	GOPC (ENSNLEG00000013426)	NUS1 (ENSNLEG00000029327)	SLC35F1 (ENSNLEG00000013471)	ENSNLEG00000028147	CEP85L (ENSNLEG00000013486)
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Orangutan	MODERN SPECIES	19	MARCKS (ENSPPYG00000035269)	ENSPPYG00000016939	HDAC2 (ENSPPYG00000016940)	HS3ST5 (ENSPPYG00000039787)	FRK (ENSPPYG00000016942)	NT5DC1 (ENSPPYG00000016943)	COL10A1 (ENSPPYG00000016944)	ENSPPYG00000035177	TSPYL4 (ENSPPYG00000040233)	ENSPPYG00000035461	TSPYL1 (ENSPPYG00000035346)	DSE (ENSPPYG00000016948)	CALHM6 (ENSPPYG00000016949) ##20	TRAPPC3L (ENSPPYG00000016950)	CALHM5 (ENSPPYG00000016951) ##20	CALHM4 (ENSPPYG00000016952) ##20	RWDD1 (ENSPPYG00000016953)	RSPH4A (ENSPPYG00000016954)	ZUP1 (ENSPPYG00000016956)	KPNA5 (ENSPPYG00000016957)	FAM162B (ENSPPYG00000016958)	GPRC6A (ENSPPYG00000016959)	RFX6 (ENSPPYG00000016960)	VGLL2 (ENSPPYG00000016961)	ROS1 (ENSPPYG00000016962)	DCBLD1 (ENSPPYG00000016963)	GOPC (ENSPPYG00000016964)	NUS1 (ENSPPYG00000025886)	SLC35F1 (ENSPPYG00000016966)	CEP85L (ENSPPYG00000016967)	PLN (ENSPPYG00000018685)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Gorilla	MODERN SPECIES	19	ENSGGOG00000006107	HDAC2 (ENSGGOG00000005428)	HS3ST5 (ENSGGOG00000001108)	FRK (ENSGGOG00000034876)	ENSGGOG00000039649	NT5DC1 (ENSGGOG00000007465)	COL10A1 (ENSGGOG00000023907)	ENSGGOG00000037308	TSPYL4 (ENSGGOG00000025875)	ENSGGOG00000024360	TSPYL1 (ENSGGOG00000016740)	DSE (ENSGGOG00000026746)	CALHM6 (ENSGGOG00000001375) ##20	TRAPPC3L (ENSGGOG00000036719)	CALHM5 (ENSGGOG00000039336) ##20	CALHM4 (ENSGGOG00000017144) ##20	RWDD1 (ENSGGOG00000026889)	ENSGGOG00000016793	ZUP1 (ENSGGOG00000016798)	KPNA5 (ENSGGOG00000011906)	FAM162B (ENSGGOG00000002045)	GPRC6A (ENSGGOG00000001199)	RFX6 (ENSGGOG00000006982)	VGLL2 (ENSGGOG00000014045)	ROS1 (ENSGGOG00000014048)	DCBLD1 (ENSGGOG00000001188)	GOPC (ENSGGOG00000013555)	NUS1 (ENSGGOG00000022321)	SLC35F1 (ENSGGOG00000014788)	CEP85L (ENSGGOG00000003828)	PLN (ENSGGOG00000037676)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Human	MODERN SPECIES	18	ENSG00000281613	RFPL4B (ENSG00000251258)	MARCKS (ENSG00000277443)	HDAC2 (ENSG00000196591)	HS3ST5 (ENSG00000249853)	FRK (ENSG00000111816)	NT5DC1 (ENSG00000178425)	COL10A1 (ENSG00000123500)	TSPYL4 (ENSG00000187189)	DSE (ENSG00000111817)	TSPYL1 (ENSG00000189241)	ENSG00000285446	CALHM6 (ENSG00000188820) ##20	TRAPPC3L (ENSG00000173626)	CALHM5 (ENSG00000178033) ##20	CALHM4 (ENSG00000164451) ##20	RWDD1 (ENSG00000111832)	RSPH4A (ENSG00000111834)	ZUP1 (ENSG00000153975)	KPNA5 (ENSG00000196911)	FAM162B (ENSG00000183807)	GPRC6A (ENSG00000173612)	RFX6 (ENSG00000185002)	VGLL2 (ENSG00000170162)	ROS1 (ENSG00000047936)	ENSG00000282218	DCBLD1 (ENSG00000164465)	GOPC (ENSG00000047932)	NUS1 (ENSG00000153989)	SLC35F1 (ENSG00000196376)	CEP85L (ENSG00000111860)
Pan	ANCESTRAL SPECIES	5	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u.a	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Bonobo	MODERN SPECIES	19	HDAC2 (ENSPPAG00000033144)	HS3ST5 (ENSPPAG00000026905)	ENSPPAG00000037500	FRK (ENSPPAG00000037662)	ENSPPAG00000009764	ENSPPAG00000008350	COL10A1 (ENSPPAG00000029466)	ENSPPAG00000034902	TSPYL4 (ENSPPAG00000025665)	ENSPPAG00000037203	TSPYL1 (ENSPPAG00000010073)	DSE (ENSPPAG00000039304)	CALHM6 (ENSPPAG00000040382) ##20	TRAPPC3L (ENSPPAG00000043671)	CALHM5 (ENSPPAG00000039792) ##20	ENSPPAG00000019471 ##20	RWDD1 (ENSPPAG00000035047)	RSPH4A (ENSPPAG00000039243)	ZUP1 (ENSPPAG00000026765)	KPNA5 (ENSPPAG00000033134)	FAM162B (ENSPPAG00000042060)	GPRC6A (ENSPPAG00000032903)	RFX6 (ENSPPAG00000010113)	VGLL2 (ENSPPAG00000043248)	ROS1 (ENSPPAG00000040274)	DCBLD1 (ENSPPAG00000030913)	GOPC (ENSPPAG00000042271)	ENSPPAG00000017927	SLC35F1 (ENSPPAG00000027433)	CEP85L (ENSPPAG00000031277)	PLN (ENSPPAG00000019702)
Chimpanzee	MODERN SPECIES	19	HDAC2 (ENSPTRG00000018519)	HS3ST5 (ENSPTRG00000018520)	ENSPTRG00000051719	FRK (ENSPTRG00000018521)	ENSPTRG00000045932	NT5DC1 (ENSPTRG00000018523)	COL10A1 (ENSPTRG00000018524)	ENSPTRG00000048668	TSPYL4 (ENSPTRG00000023905)	ENSPTRG00000051033	TSPYL1 (ENSPTRG00000018528)	DSE (ENSPTRG00000018529)	TRAPPC3L (ENSPTRG00000050736)	CALHM6 (ENSPTRG00000018530) ##20	CALHM5 (ENSPTRG00000048761) ##20	CALHM4 (ENSPTRG00000018532) ##20	RWDD1 (ENSPTRG00000018534)	RSPH4A (ENSPTRG00000018535)	ZUP1 (ENSPTRG00000018536)	KPNA5 (ENSPTRG00000018537)	FAM162B (ENSPTRG00000018538)	GPRC6A (ENSPTRG00000018539)	RFX6 (ENSPTRG00000018540)	VGLL2 (ENSPTRG00000018542)	ROS1 (ENSPTRG00000018544)	DCBLD1 (ENSPTRG00000018545)	GOPC (ENSPTRG00000018546)	ENSPTRG00000044107	ENSPTRG00000018547	SLC35F1 (ENSPTRG00000018548)	CEP85L (ENSPTRG00000018549)
Tarsier	MODERN SPECIES	3809									FRK (ENSTSYG00000006421)	ENSTSYG00000012714	COL10A1 (ENSTSYG00000035031)	DSE (ENSTSYG00000009566)	FAM26F (ENSTSYG00000036009) ##20	TRAPPC3L (ENSTSYG00000006716)	FAM26E (ENSTSYG00000006740) ##20	FAM26D (ENSTSYG00000006743) ##20	RWDD1 (ENSTSYG00000008636)
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Lemuriformes_a	ANCESTRAL SPECIES	63	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Coquerels sifaka	MODERN SPECIES	445								FRK (ENSPCOG00000016754)	ENSPCOG00000017572	NT5DC1 (ENSPCOG00000019513)	TSPYL1 (ENSPCOG00000020616)	DSE (ENSPCOG00000017942)	CALHM6 (ENSPCOG00000015099) ##20	CALHM5 (ENSPCOG00000020027) ##20	TRAPPC3L (ENSPCOG00000018449)	CALHM4 (ENSPCOG00000027369) ##20	RSPH4A (ENSPCOG00000006824)	ZUP1 (ENSPCOG00000021558)	KPNA5 (ENSPCOG00000016943)	GPRC6A (ENSPCOG00000013226)	ENSPCOG00000024330	RFX6 (ENSPCOG00000024904)	VGLL2 (ENSPCOG00000017437)	ROS1 (ENSPCOG00000018293)	DCBLD1 (ENSPCOG00000023692)	GOPC (ENSPCOG00000028025)	ENSPCOG00000019234	NUS1 (ENSPCOG00000020589)
Greater bamboo lemur	MODERN SPECIES	117	ENSPSMG00000025088	MARCKS (ENSPSMG00000025094)	ENSPSMG00000025097	HDAC2 (ENSPSMG00000025136)	HS3ST5 (ENSPSMG00000025147)	FRK (ENSPSMG00000025161)	NT5DC1 (ENSPSMG00000025168)	ENSPSMG00000025170	TSPYL4 (ENSPSMG00000025171)	ENSPSMG00000025176	ENSPSMG00000025178	DSE (ENSPSMG00000025197)	CALHM6 (ENSPSMG00000025201) ##20	TRAPPC3L (ENSPSMG00000025203)	CALHM5 (ENSPSMG00000025204) ##20	CALHM4 (ENSPSMG00000025205) ##20	RWDD1 (ENSPSMG00000025211)	ENSPSMG00000025216	ENSPSMG00000025223	RSPH4A (ENSPSMG00000025239)	ZUP1 (ENSPSMG00000025258)	KPNA5 (ENSPSMG00000025274)	FAM162B (ENSPSMG00000025283)	GPRC6A (ENSPSMG00000025285)	RFX6 (ENSPSMG00000025293)
Mouse lemur	MODERN SPECIES	28	CCN6 (ENSMICG00000008735)	TUBE1 (ENSMICG00000047219)	FAM229B (ENSMICG00000043291)	LAMA4 (ENSMICG00000008751)	MARCKS (ENSMICG00000026883)	HDAC2 (ENSMICG00000000261)	HS3ST5 (ENSMICG00000027940)	FRK (ENSMICG00000003603)	ENSMICG00000046212	NT5DC1 (ENSMICG00000003606)	TSPYL1 (ENSMICG00000044487)	DSE (ENSMICG00000008111)	CALHM6 (ENSMICG00000032074) ##20	CALHM5 (ENSMICG00000008119) ##20	TRAPPC3L (ENSMICG00000008115)	CALHM4 (ENSMICG00000008123) ##20	ENSMICG00000036368	ENSMICG00000032805	MMUT (ENSMICG00000008076)	CENPQ (ENSMICG00000042405)	GLYATL3 (ENSMICG00000002636)	ENSMICG00000046680	RHAG (ENSMICG00000008366)	CRISP2 (ENSMICG00000014964)	CRISP3 (ENSMICG00000002617)	CRISP1 (ENSMICG00000002786)	DEFB114 (ENSMICG00000044264)	DEFB113 (ENSMICG00000032756)	DEFB110 (ENSMICG00000047331)	ENSMICG00000047064	TFAP2D (ENSMICG00000005507)
Bushbaby	MODERN SPECIES	117	ENSOGAG00000031703	ENSOGAG00000025253	ENSOGAG00000028073	HDAC2 (ENSOGAG00000011016)	HS3ST5 (ENSOGAG00000011023)	FRK (ENSOGAG00000009140)	NT5DC1 (ENSOGAG00000009142)	COL10A1 (ENSOGAG00000024717)	TSPYL4 (ENSOGAG00000031495)	TSPYL1 (ENSOGAG00000001189)	ENSOGAG00000025070	DSE (ENSOGAG00000001191)	CALHM6 (ENSOGAG00000032372) ##20	TRAPPC3L (ENSOGAG00000014677)	CALHM5 (ENSOGAG00000014679) ##20	CALHM4 (ENSOGAG00000014682) ##20	RWDD1 (ENSOGAG00000014683)	ENSOGAG00000025916	ENSOGAG00000030595	RSPH4A (ENSOGAG00000011917)	ZUP1 (ENSOGAG00000011921)	KPNA5 (ENSOGAG00000011924)	FAM162B (ENSOGAG00000011931)	GPRC6A (ENSOGAG00000011933)	RFX6 (ENSOGAG00000011937)	VGLL2 (ENSOGAG00000031570)	ROS1 (ENSOGAG00000005027)	GOPC (ENSOGAG00000014241)	ENSOGAG00000025632	ENSOGAG00000001894	SLC35F1 (ENSOGAG00000001897)
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Tree shrew	MODERN SPECIES	4335												DSE (ENSTBEG00000009310)	CALHM6 (ENSTBEG00000009471) ##20	TRAPPC3L (ENSTBEG00000001430)	CALHM5 (ENSTBEG00000001977) ##20	CALHM4 (ENSTBEG00000002287) ##20	RWDD1 (ENSTBEG00000002543)
Glires	ANCESTRAL SPECIES	5	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00900000143015	ENSGT01050000247848	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Hystricomorpha	ANCESTRAL SPECIES	41	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Hystricomorpha_a	ANCESTRAL SPECIES	46	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Hystricomorpha_b	ANCESTRAL SPECIES	121			ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Long-tailed chinchilla	MODERN SPECIES	233	FAM229B (ENSCLAG00000000365)	LAMA4 (ENSCLAG00000000130)	ENSCLAG00000000080	ENSCLAG00000000058	ENSCLAG00000017382	ENSCLAG00000000824	HDAC2 (ENSCLAG00000000749)	ENSCLAG00000000682	HS3ST5 (ENSCLAG00000000666)	FRK (ENSCLAG00000000628)	ENSCLAG00000000565	NT5DC1 (ENSCLAG00000000283)	DSE (ENSCLAG00000000219)	CALHM5 (ENSCLAG00000000210) ##20	TRAPPC3L (ENSCLAG00000000221)	CALHM4 (ENSCLAG00000000213) ##20	ENSCLAG00000000206
Degu	MODERN SPECIES	427															ENSODEG00000000058	CALHM4 (ENSODEG00000000047) ##20	ENSODEG00000000043	ENSODEG00000000039	ENSODEG00000000032
Guinea pig	MODERN SPECIES	58	FYN (ENSCPOG00000012822)	CCN6 (ENSCPOG00000004828)	TUBE1 (ENSCPOG00000004829)	FAM229B (ENSCPOG00000031930)	LAMA4 (ENSCPOG00000006325)	HDAC2 (ENSCPOG00000014344)	HS3ST5 (ENSCPOG00000031109)	FRK (ENSCPOG00000006954)	ENSCPOG00000009416	NT5DC1 (ENSCPOG00000009411)	TSPYL1 (ENSCPOG00000022929)	ENSCPOG00000035087	DSE (ENSCPOG00000003402)	CALHM5 (ENSCPOG00000036158) ##20	TRAPPC3L (ENSCPOG00000012848)	CALHM4 (ENSCPOG00000012855) ##20	RWDD1 (ENSCPOG00000038110)	ENSCPOG00000004731	SMOC2 (ENSCPOG00000008023)	THBS2 (ENSCPOG00000027034)	WDR27 (ENSCPOG00000011113)	C6orf120 (ENSCPOG00000027368)	PHF10 (ENSCPOG00000022409)	DYNLT2 (ENSCPOG00000037938)	ERMARD (ENSCPOG00000011581)	DLL1 (ENSCPOG00000024133)	FAM120B (ENSCPOG00000032998)	PSMB1 (ENSCPOG00000001187)	TBP (ENSCPOG00000039966)	ENSCPOG00000003842	GSTA4 (ENSCPOG00000022871)
Naked mole-rat female	MODERN SPECIES	30	DTYMK (ENSHGLG00000018717)	ING5 (ENSHGLG00000037490)	D2HGDH (ENSHGLG00000003119)	GAL3ST2 (ENSHGLG00000003311)	NEU4 (ENSHGLG00000003691)	PDCD1 (ENSHGLG00000032677)	ENSHGLG00000004109	ENSHGLG00000038816	ENSHGLG00000000610	ENSHGLG00000041212	TSPYL4 (ENSHGLG00000036673)	DSE (ENSHGLG00000041966)	CALHM6 (ENSHGLG00000033792) ##20	TRAPPC3L (ENSHGLG00000002142)	CALHM5 (ENSHGLG00000035655) ##20	CALHM4 (ENSHGLG00000002679) ##20	ENSHGLG00000002331	ENSHGLG00000019728	ENSHGLG00000019671	ENSHGLG00000019674	ENSHGLG00000000164	ENSHGLG00000050432	ENSHGLG00000002101	ENSHGLG00000017890	ENSHGLG00000047673	ENSHGLG00000050169	ENSHGLG00000034017	CHAMP1 (ENSHGLG00000019874)	ENSHGLG00000040146	ENSHGLG00000034132	CDC16 (ENSHGLG00000001834)
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00900000143015	ENSGT01050000247848	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w	ENSGT00940000156772.x	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000159970	ENSGT00900000143015.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w	ENSGT00940000156772.x	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT01100000266009	ENSGT00940000162914
Alpin marmot	MODERN SPECIES	2	FYN (ENSMMMG00000014912)	CCN6 (ENSMMMG00000015161)	TUBE1 (ENSMMMG00000015165)	FAM229B (ENSMMMG00000015179)	LAMA4 (ENSMMMG00000015194)	ENSMMMG00000015261	HDAC2 (ENSMMMG00000015264)	HS3ST5 (ENSMMMG00000015290)	FRK (ENSMMMG00000015306)	ENSMMMG00000015316	ENSMMMG00000015321	TSPYL4 (ENSMMMG00000015326)	DSE (ENSMMMG00000015341)	CALHM6 (ENSMMMG00000015349) ##20	CALHM5 (ENSMMMG00000015357) ##20	CALHM4 (ENSMMMG00000015364) ##20	RWDD1 (ENSMMMG00000015368)	ENSMMMG00000015375	ENSMMMG00000015383	ENSMMMG00000015402	RSPH4A (ENSMMMG00000015424)	ZUP1 (ENSMMMG00000015434)	KPNA5 (ENSMMMG00000015469)	FAM162B (ENSMMMG00000015589)	GPRC6A (ENSMMMG00000015597)	RFX6 (ENSMMMG00000015641)	VGLL2 (ENSMMMG00000015787)	ROS1 (ENSMMMG00000015799)	DCBLD1 (ENSMMMG00000015903)	GOPC (ENSMMMG00000015918)	ENSMMMG00000015939
Marmotini_b	ANCESTRAL SPECIES	230						ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w
Arctic ground squirrel	MODERN SPECIES	641								FRK (ENSUPAG00010000456)	ENSUPAG00010000440	NT5DC1 (ENSUPAG00010000422)	TSPYL4 (ENSUPAG00010000416)	DSE (ENSUPAG00010000398)	CALHM6 (ENSUPAG00010000391) ##20	CALHM5 (ENSUPAG00010000386) ##20	TRAPPC3L (ENSUPAG00010000373)	CALHM4 (ENSUPAG00010000356) ##20	RWDD1 (ENSUPAG00010000317)	ENSUPAG00010000296
Squirrel	MODERN SPECIES	424							FRK (ENSSTOG00000010404)	NT5DC1 (ENSSTOG00000008916)	COL10A1 (ENSSTOG00000008935)	TSPYL4 (ENSSTOG00000008940)	TSPYL1 (ENSSTOG00000028666)	DSE (ENSSTOG00000013912)	CALHM6 (ENSSTOG00000006731) ##20	TRAPPC3L (ENSSTOG00000032320)	CALHM5 (ENSSTOG00000006744) ##20	CALHM4 (ENSSTOG00000001157) ##20	RWDD1 (ENSSTOG00000020231)
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005010204	HDAC2 (ENSSVLG00005010140)	ENSSVLG00005010101	HS3ST5 (ENSSVLG00005010072)	ENSSVLG00005010037	ENSSVLG00005010009	FRK (ENSSVLG00005009937)	COL10A1 (ENSSVLG00005009901)	NT5DC1 (ENSSVLG00005009872)	TSPYL4 (ENSSVLG00005009852)	TSPYL1 (ENSSVLG00005009835)	DSE (ENSSVLG00005009768)	CALHM6 (ENSSVLG00005009719) ##20	CALHM5 (ENSSVLG00005009693) ##20	TRAPPC3L (ENSSVLG00005009643)	CALHM4 (ENSSVLG00005009602) ##20	ENSSVLG00005009556	ENSSVLG00005009507	RSPH4A (ENSSVLG00005009389)	ZUP1 (ENSSVLG00005009321)	KPNA5 (ENSSVLG00005009288)	FAM162B (ENSSVLG00005009241)	GPRC6A (ENSSVLG00005009132)	RFX6 (ENSSVLG00005008988)	VGLL2 (ENSSVLG00005008910)	ROS1 (ENSSVLG00005008411)	GOPC (ENSSVLG00005008267)	ENSSVLG00005008200	ENSSVLG00005008163	SLC35F1 (ENSSVLG00005008070)	ENSSVLG00005008035
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Chinese hamster chok1gshd	MODERN SPECIES	160	Fam229b (ENSCGRG00001012149)	Lama4 (ENSCGRG00001023009)	Marcks (ENSCGRG00001020371)	Hdac2 (ENSCGRG00001016612)	Hs3st5 (ENSCGRG00001015101)	ENSCGRG00001014662	Frk (ENSCGRG00001012098)	Col10a1 (ENSCGRG00001011438)	Nt5dc1 (ENSCGRG00001019057)	Tspyl4 (ENSCGRG00001015452)	Tspyl1 (ENSCGRG00001016055)	Dse (ENSCGRG00001016755)	Calhm6 (ENSCGRG00001016166) ##20	Calhm5 (ENSCGRG00001015860) ##20	Trappc3l (ENSCGRG00001001357)	Calhm4 (ENSCGRG00001000585) ##20	Rwdd1 (ENSCGRG00001000262)	ENSCGRG00001022958	ENSCGRG00001022688	Rsph4a (ENSCGRG00001022255)	Zup1 (ENSCGRG00001019649)	ENSCGRG00001017023	Fam162b (ENSCGRG00001013690)	Gprc6a (ENSCGRG00001019351)	Rfx6 (ENSCGRG00001013519)	ENSCGRG00001016423	Vgll2 (ENSCGRG00001012605)	ENSCGRG00001008034	Ros1 (ENSCGRG00001019975)	Dcbld1 (ENSCGRG00001014316)	ENSCGRG00001016329
Golden Hamster	MODERN SPECIES	655	Fam229b (ENSMAUG00000019053)	Lama4 (ENSMAUG00000008791)	Marcks (ENSMAUG00000014455)	ENSMAUG00000006781	Hdac2 (ENSMAUG00000020410)	Hs3st5 (ENSMAUG00000011520)	Frk (ENSMAUG00000011561)	Nt5dc1 (ENSMAUG00000018298)	Col10a1 (ENSMAUG00000021181)	Tspyl4 (ENSMAUG00000007306)	Tspyl1 (ENSMAUG00000018330)	Dse (ENSMAUG00000020240)	Calhm6 (ENSMAUG00000002308) ##20	Trappc3l (ENSMAUG00000004214)	Calhm5 (ENSMAUG00000014804) ##20	Calhm4 (ENSMAUG00000020546) ##20	Rwdd1 (ENSMAUG00000001504)	ENSMAUG00000009333	Rsph4a (ENSMAUG00000009247)	Zup1 (ENSMAUG00000012807)	ENSMAUG00000009856	Fam162b (ENSMAUG00000012733)	Rfx6 (ENSMAUG00000002997)	ENSMAUG00000007444	Vgll2 (ENSMAUG00000019922)	Ros1 (ENSMAUG00000016942)	Dcbld1 (ENSMAUG00000010738)	Gopc (ENSMAUG00000007546)	Nepn (ENSMAUG00000018286)	Nus1 (ENSMAUG00000019803)	Slc35f1 (ENSMAUG00000011113)
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Prairie vole	MODERN SPECIES	358	Lama4 (ENSMOCG00000007325)	ENSMOCG00000014007	Marcks (ENSMOCG00000011957)	ENSMOCG00000007938	Hs3st5 (ENSMOCG00000006907)	ENSMOCG00000021869	Frk (ENSMOCG00000011544)	ENSMOCG00000018965	Nt5dc1 (ENSMOCG00000011487)	Tspyl4 (ENSMOCG00000006852)	Tspyl1 (ENSMOCG00000007884)	Dse (ENSMOCG00000021598)	Calhm6 (ENSMOCG00000017769) ##20	Calhm5 (ENSMOCG00000011633) ##20	Trappc3l (ENSMOCG00000011302)	Calhm4 (ENSMOCG00000004418) ##20	ENSMOCG00000002869	ENSMOCG00000021945	Grik2 (ENSMOCG00000022205)	Ascc3 (ENSMOCG00000004549)	Sim1 (ENSMOCG00000017754)	ENSMOCG00000008070	Ppp1r14c (ENSMOCG00000002551)	Iyd (ENSMOCG00000012475)	Plekhg1 (ENSMOCG00000006027)	Mthfd1l (ENSMOCG00000011918)	ENSMOCG00000019373	Zbtb2 (ENSMOCG00000018175)	Rmnd1 (ENSMOCG00000012373)	Armt1 (ENSMOCG00000008335)	Ccdc170 (ENSMOCG00000015340)
Northern American deer mouse	MODERN SPECIES	7	Fam229b (ENSPEMG00000029065)	Lama4 (ENSPEMG00000019628)	ENSPEMG00000014821	Hdac2 (ENSPEMG00000019358)	Hs3st5 (ENSPEMG00000027903)	ENSPEMG00000027759	Frk (ENSPEMG00000027385)	Nt5dc1 (ENSPEMG00000020069)	Col10a1 (ENSPEMG00000019392)	Tspyl4 (ENSPEMG00000031222)	Tspyl1 (ENSPEMG00000019621)	Dse (ENSPEMG00000019781)	Calhm6 (ENSPEMG00000019812) ##20	Trappc3l (ENSPEMG00000019941)	Calhm5 (ENSPEMG00000019478) ##20	Calhm4 (ENSPEMG00000017719) ##20	Rwdd1 (ENSPEMG00000000119)	ENSPEMG00000010482	Rsph4a (ENSPEMG00000015392)	Zup1 (ENSPEMG00000019963)	ENSPEMG00000021071	Fam162b (ENSPEMG00000022270)	Gprc6a (ENSPEMG00000021921)	Rfx6 (ENSPEMG00000013570)	ENSPEMG00000028021	Vgll2 (ENSPEMG00000011624)	Ros1 (ENSPEMG00000018962)	Dcbld1 (ENSPEMG00000023463)	Gopc (ENSPEMG00000017950)	ENSPEMG00000028213	ENSPEMG00000027015
Murinae	ANCESTRAL SPECIES	36	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000003880.b.b
Mus	ANCESTRAL SPECIES	15	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000156772.`b	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b	ENSGT00390000018131
Mouse	MODERN SPECIES	1	Fam229b (ENSMUSG00000051736)	Lama4 (ENSMUSG00000019846)	Rfpl4b (ENSMUSG00000094311)	Marcks (ENSMUSG00000069662)	Hdac2 (ENSMUSG00000019777)	Hs3st5 (ENSMUSG00000044499)	Amd2 (ENSMUSG00000063953)	Frk (ENSMUSG00000019779)	Col10a1 (ENSMUSG00000039462)	Tspyl4 (ENSMUSG00000039485)	Nt5dc1 (ENSMUSG00000039480)	Tspyl1 (ENSMUSG00000047514)	Dse (ENSMUSG00000039497)	Calhm6 (ENSMUSG00000046031) ##20	Calhm5 (ENSMUSG00000049872) ##20	Calhm4 (ENSMUSG00000039508) ##20	Trappc3l (ENSMUSG00000071340)	Rwdd1 (ENSMUSG00000019782)	Zup1 (ENSMUSG00000039531)	Rsph4a (ENSMUSG00000039552)	Sult3a1 (ENSMUSG00000069668)	Sult3a2 (ENSMUSG00000090298)	Clvs2 (ENSMUSG00000019785)	Trdn (ENSMUSG00000019787)	Nkain2 (ENSMUSG00000069670)	Rnf217 (ENSMUSG00000063760)	Tpd52l1 (ENSMUSG00000000296)	Hddc2 (ENSMUSG00000000295)	Hey2 (ENSMUSG00000019789)	Ncoa7 (ENSMUSG00000039697)	Hint3 (ENSMUSG00000019791)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000003880.b.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000156772.`b	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b
spretus	MODERN SPECIES	1	Tube1 (MGP_SPRETEiJ_G0016053)	Fam229b (MGP_SPRETEiJ_G0016052)	Lama4 (MGP_SPRETEiJ_G0016051)	Rfpl4b (MGP_SPRETEiJ_G0016050)	Marcks (MGP_SPRETEiJ_G0016049)	Hdac2 (MGP_SPRETEiJ_G0016048)	Hs3st5 (MGP_SPRETEiJ_G0016047)	Frk (MGP_SPRETEiJ_G0016046)	Col10a1 (MGP_SPRETEiJ_G0016045)	Nt5dc1 (MGP_SPRETEiJ_G0016044)	Tspyl4 (MGP_SPRETEiJ_G0016043)	Tspyl1 (MGP_SPRETEiJ_G0016042)	Dse (MGP_SPRETEiJ_G0016041)	Calhm6 (MGP_SPRETEiJ_G0016040) ##20	Calhm5 (MGP_SPRETEiJ_G0016039) ##20	Calhm4 (MGP_SPRETEiJ_G0016038) ##20	Trappc3l (MGP_SPRETEiJ_G0016037)	Rwdd1 (MGP_SPRETEiJ_G0016036)	MGP_SPRETEiJ_G0016035	Zup1 (MGP_SPRETEiJ_G0016034)	Rsph4a (MGP_SPRETEiJ_G0016033)	Sult3a1 (MGP_SPRETEiJ_G0016032)	MGP_SPRETEiJ_G0016031	Clvs2 (MGP_SPRETEiJ_G0016030)	Trdn (MGP_SPRETEiJ_G0016029)	Nkain2 (MGP_SPRETEiJ_G0016028)	Rnf217 (MGP_SPRETEiJ_G0016027)	Tpd52l1 (MGP_SPRETEiJ_G0016026)	Hddc2 (MGP_SPRETEiJ_G0016025)	Hey2 (MGP_SPRETEiJ_G0016024)	Ncoa7 (MGP_SPRETEiJ_G0016023)
Steppe mouse	MODERN SPECIES	2637							Frk (ENSMSIG00000029824)	Col10a1 (ENSMSIG00000029818)	Nt5dc1 (ENSMSIG00000029807)	Tspyl4 (ENSMSIG00000029805)	Tspyl1 (ENSMSIG00000029804)	Dse (ENSMSIG00000029795)	Calhm6 (ENSMSIG00000029790) ##20	Calhm5 (ENSMSIG00000029788) ##20	Trappc3l (ENSMSIG00000029785)	Calhm4 (ENSMSIG00000029784) ##20	ENSMSIG00000029781
Ryukyu mouse	MODERN SPECIES	1	Tube1 (MGP_CAROLIEiJ_G0015244)	Fam229b (MGP_CAROLIEiJ_G0015243)	Lama4 (MGP_CAROLIEiJ_G0015242)	Rfpl4b (MGP_CAROLIEiJ_G0015241)	Marcks (MGP_CAROLIEiJ_G0015240)	Hdac2 (MGP_CAROLIEiJ_G0015239)	Hs3st5 (MGP_CAROLIEiJ_G0015238)	Frk (MGP_CAROLIEiJ_G0015237)	Col10a1 (MGP_CAROLIEiJ_G0015236)	Tspyl4 (MGP_CAROLIEiJ_G0015235)	Nt5dc1 (MGP_CAROLIEiJ_G0015234)	Tspyl1 (MGP_CAROLIEiJ_G0015233)	Dse (MGP_CAROLIEiJ_G0015232)	Calhm6 (MGP_CAROLIEiJ_G0015231) ##20	Calhm5 (MGP_CAROLIEiJ_G0015230) ##20	Calhm4 (MGP_CAROLIEiJ_G0015229) ##20	Trappc3l (MGP_CAROLIEiJ_G0015228)	Rwdd1 (MGP_CAROLIEiJ_G0015227)	MGP_CAROLIEiJ_G0015226	Zup1 (MGP_CAROLIEiJ_G0015225)	Rsph4a (MGP_CAROLIEiJ_G0015224)	MGP_CAROLIEiJ_G0015223	Sult3a1 (MGP_CAROLIEiJ_G0015222)	Clvs2 (MGP_CAROLIEiJ_G0015221)	Trdn (MGP_CAROLIEiJ_G0015220)	Nkain2 (MGP_CAROLIEiJ_G0015219)	Rnf217 (MGP_CAROLIEiJ_G0015218)	Tpd52l1 (MGP_CAROLIEiJ_G0015217)	Hddc2 (MGP_CAROLIEiJ_G0015216)	Hey2 (MGP_CAROLIEiJ_G0015215)	Ncoa7 (MGP_CAROLIEiJ_G0015214)
Shrew mouse	MODERN SPECIES	22	Tube1 (MGP_PahariEiJ_G0030661)	Fam229b (MGP_PahariEiJ_G0030660)	Lama4 (MGP_PahariEiJ_G0030659)	Rfpl4b (MGP_PahariEiJ_G0030658)	Marcks (MGP_PahariEiJ_G0030657)	Hdac2 (MGP_PahariEiJ_G0030656)	Hs3st5 (MGP_PahariEiJ_G0030655)	Frk (MGP_PahariEiJ_G0030654)	Col10a1 (MGP_PahariEiJ_G0030653)	Tspyl4 (MGP_PahariEiJ_G0030652)	Nt5dc1 (MGP_PahariEiJ_G0030651)	Tspyl1 (MGP_PahariEiJ_G0030650)	Dse (MGP_PahariEiJ_G0030649)	MGP_PahariEiJ_G0030648 ##20	Calhm5 (MGP_PahariEiJ_G0030647) ##20	Calhm4 (MGP_PahariEiJ_G0030646) ##20	Trappc3l (MGP_PahariEiJ_G0030645)	Rwdd1 (MGP_PahariEiJ_G0030644)	MGP_PahariEiJ_G0030643	Zup1 (MGP_PahariEiJ_G0030642)	Rsph4a (MGP_PahariEiJ_G0030641)	MGP_PahariEiJ_G0030640
Rat	MODERN SPECIES	12	Snrpd2l (ENSRNOG00000048758)	Sowahc (ENSRNOG00000064749)	Septin10 (ENSRNOG00000049507)	ENSRNOG00000068135	Sh3rf3 (ENSRNOG00000046791)	Edar (ENSRNOG00000028598)	Ccdc138 (ENSRNOG00000028581)	ENSRNOG00000064170	Ranbp2 (ENSRNOG00000000796)	Lims1 (ENSRNOG00000037765)	Gcc2 (ENSRNOG00000000823)	ENSRNOG00000069923	Dse (ENSRNOG00000000824)	Calhm6 (ENSRNOG00000037757) ##20	Calhm5 (ENSRNOG00000000825) ##20	Calhm4 (ENSRNOG00000000580) ##20	Trappc3l (ENSRNOG00000031290)	Rwdd1 (ENSRNOG00000042916)	Tet1 (ENSRNOG00000000277)	LOC103694416 (ENSRNOG00000051063)	Dna2 (ENSRNOG00000000387)	Rufy2 (ENSRNOG00000065563)	Hnrnph3 (ENSRNOG00000048193)	Ak6 (ENSRNOG00000026813)	Pbld2 (ENSRNOG00000069854)	Pbld1 (ENSRNOG00000000386)	Atoh7 (ENSRNOG00000000384)	Mypn (ENSRNOG00000000383)	Herc4 (ENSRNOG00000061040)	Sirt1 (ENSRNOG00000051592)	Dnajc12 (ENSRNOG00000051960)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1622							Frk (ENSNGAG00000023884)	ENSNGAG00000019635	Nt5dc1 (ENSNGAG00000017414)	Tspyl4 (ENSNGAG00000013340)	Tspyl1 (ENSNGAG00000002957)	Dse (ENSNGAG00000023284)	Calhm6 (ENSNGAG00000022608) ##20	Calhm5 (ENSNGAG00000021647) ##20	Trappc3l (ENSNGAG00000020430)	Calhm4 (ENSNGAG00000011668) ##20	ENSNGAG00000022138	ENSNGAG00000021507	ENSNGAG00000023845	ENSNGAG00000023286	Rsph4a (ENSNGAG00000022773)	Zup1 (ENSNGAG00000020874)
Lesser Egyptian jerboa	MODERN SPECIES	78	ENSJJAG00000024023	Rev3l (ENSJJAG00000000424)	ENSJJAG00000003050	Fyn (ENSJJAG00000019918)	Lama4 (ENSJJAG00000015844)	ENSJJAG00000024370	Hdac2 (ENSJJAG00000006043)	Hs3st5 (ENSJJAG00000016015)	ENSJJAG00000018330	Frk (ENSJJAG00000012534)	ENSJJAG00000021831	Tspyl4 (ENSJJAG00000003740)	Tspyl1 (ENSJJAG00000004543)	Dse (ENSJJAG00000009728)	Calhm5 (ENSJJAG00000000846) ##20	Calhm4 (ENSJJAG00000015260) ##20	ENSJJAG00000020421
Kangaroo rat	MODERN SPECIES	476	Fyn (ENSDORG00000016706)	Ccn6 (ENSDORG00000012026)	ENSDORG00000012029	Fam229b (ENSDORG00000012031)	Lama4 (ENSDORG00000012032)	Hdac2 (ENSDORG00000013317)	Hs3st5 (ENSDORG00000028438)	Frk (ENSDORG00000000702)	ENSDORG00000010312	Nt5dc1 (ENSDORG00000010307)	Tspyl4 (ENSDORG00000027297)	Dse (ENSDORG00000012764)	Calhm6 (ENSDORG00000012765) ##20	Calhm5 (ENSDORG00000012771) ##20	Trappc3l (ENSDORG00000012769)	Calhm4 (ENSDORG00000012772) ##20	Rwdd1 (ENSDORG00000012373)	ENSDORG00000025806	Rsph4a (ENSDORG00000003944)	Zup1 (ENSDORG00000003947)	ENSDORG00000015949	Fam162b (ENSDORG00000024159)	Gprc6a (ENSDORG00000013585)	Rfx6 (ENSDORG00000013591)	Vgll2 (ENSDORG00000016343)	Ros1 (ENSDORG00000007167)	Dcbld1 (ENSDORG00000015776)	Gopc (ENSDORG00000015778)	Nepn (ENSDORG00000026879)	ENSDORG00000023742	Slc35f1 (ENSDORG00000011293)
Lagomorpha	ANCESTRAL SPECIES	108		ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT01050000244950.a.a.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Rabbit	MODERN SPECIES	3	ENSOCUG00000037887	FRK (ENSOCUG00000001181)	NT5DC1 (ENSOCUG00000001184)	ENSOCUG00000001188	ENSOCUG00000022880	TSPYL4 (ENSOCUG00000016118)	ENSOCUG00000015797	ENSOCUG00000032572	DSE (ENSOCUG00000007344)	CALHM6 (ENSOCUG00000029266) ##20	ENSOCUG00000030465	ENSOCUG00000035395	ENSOCUG00000032983	TRAPPC3L (ENSOCUG00000002656)	CALHM5 (ENSOCUG00000002660) ##20	CALHM4 (ENSOCUG00000025315) ##20	ENSOCUG00000013592	SULT3A1 (ENSOCUG00000021060)	ENSOCUG00000022763	ENSOCUG00000021703	KPNA5 (ENSOCUG00000007812)	RSPH4A (ENSOCUG00000009852)	ZUP1 (ENSOCUG00000007805)	ENSOCUG00000037695	FAM162B (ENSOCUG00000022415)	GPRC6A (ENSOCUG00000010194)	ENSOCUG00000037461	ENSOCUG00000013444	RFX6 (ENSOCUG00000013227)	ENSOCUG00000034186	VGLL2 (ENSOCUG00000003200)
Pika	MODERN SPECIES	9224																CALHM4 (ENSOPRG00000010933) ##20
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Diprotodontia_a	ANCESTRAL SPECIES	23	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Common wonbat	MODERN SPECIES	426	ENSVURG00010022817	CCN6 (ENSVURG00010022820)	TUBE1 (ENSVURG00010022830)	FAM229B (ENSVURG00010022837)	LAMA4 (ENSVURG00010022847)	ENSVURG00010022899	MARCKS (ENSVURG00010022906)	HDAC2 (ENSVURG00010022910)	HS3ST5 (ENSVURG00010022928)	FRK (ENSVURG00010022934)	NT5DC1 (ENSVURG00010022944)	ENSVURG00010022951	DSE (ENSVURG00010022960)	ENSVURG00010022974	CALHM5 (ENSVURG00010022978) ##20	CALHM4 (ENSVURG00010022981) ##20	ENSVURG00010022985	RWDD1 (ENSVURG00010022993)	RSPH4A (ENSVURG00010023005)	ENSVURG00010023011	ENSVURG00010023013	KPNA5 (ENSVURG00010023019)	GPRC6A (ENSVURG00010023032)	RFX6 (ENSVURG00010023038)	ENSVURG00010023044	ENSVURG00010023048	ENSVURG00010023052	DCBLD1 (ENSVURG00010023057)	GOPC (ENSVURG00010023061)	ENSVURG00010023067	SLC35F1 (ENSVURG00010023072)
koala	MODERN SPECIES	216							FRK (ENSPCIG00000008683)	NT5DC1 (ENSPCIG00000008684)	ENSPCIG00000034146	DSE (ENSPCIG00000008687)	ENSPCIG00000008688	ENSPCIG00000008689 ##20	ENSPCIG00000008693 ##20	TRAPPC3L (ENSPCIG00000008694)	CALHM5 (ENSPCIG00000031293) ##20	CALHM4 (ENSPCIG00000008698) ##20	ENSPCIG00000023060	ENSPCIG00000023063	RSPH4A (ENSPCIG00000023064)	ZUP1 (ENSPCIG00000023066)	KPNA5 (ENSPCIG00000023067)	ENSPCIG00000009100	RFX6 (ENSPCIG00000023071)	ENSPCIG00000031623	DCBLD1 (ENSPCIG00000023078)	GOPC (ENSPCIG00000023081)	ENSPCIG00000023085	NUS1 (ENSPCIG00000022299)	SLC35F1 (ENSPCIG00000033480)	CEP85L (ENSPCIG00000021049)	PLN (ENSPCIG00000021050)
Wallaby	MODERN SPECIES	8238															TRAPPC3L (ENSMEUG00000007739)	CALHM4 (ENSMEUG00000007741) ##20
Tasmanian devil	MODERN SPECIES	3	FAM229B (ENSSHAG00000014011)	LAMA4 (ENSSHAG00000014100)	ENSSHAG00000030163	MARCKS (ENSSHAG00000032396)	HDAC2 (ENSSHAG00000029979)	HS3ST5 (ENSSHAG00000026218)	ENSSHAG00000021743	FRK (ENSSHAG00000018366)	ENSSHAG00000018580	NT5DC1 (ENSSHAG00000018559)	DSE (ENSSHAG00000000534)	ENSSHAG00000025331 ##20	ENSSHAG00000004138 ##20	CALHM5 (ENSSHAG00000023597) ##20	TRAPPC3L (ENSSHAG00000005649)	CALHM4 (ENSSHAG00000006568) ##20	ENSSHAG00000025679	RWDD1 (ENSSHAG00000030217)	RSPH4A (ENSSHAG00000007508)	ZUP1 (ENSSHAG00000017118)	KPNA5 (ENSSHAG00000008042)	GPRC6A (ENSSHAG00000008754)	RFX6 (ENSSHAG00000009393)	ENSSHAG00000011540	DCBLD1 (ENSSHAG00000023740)	GOPC (ENSSHAG00000013357)	ENSSHAG00000013766	NUS1 (ENSSHAG00000031483)	SLC35F1 (ENSSHAG00000022683)	CEP85L (ENSSHAG00000022550)	ASF1A (ENSSHAG00000008878)
Opossum	MODERN SPECIES	1	ENSMODG00000037190	HS3ST5 (ENSMODG00000036869)	ENSMODG00000016446	ENSMODG00000042919	ENSMODG00000028476	ENSMODG00000038439	FRK (ENSMODG00000017852)	NT5DC1 (ENSMODG00000017849)	ENSMODG00000050348	ENSMODG00000017850	DSE (ENSMODG00000017846)	ENSMODG00000017842 ##20	ENSMODG00000017841 ##20	TRAPPC3L (ENSMODG00000023338)	CALHM5 (ENSMODG00000017840) ##20	CALHM4 (ENSMODG00000017838) ##20	ENSMODG00000005764	RWDD1 (ENSMODG00000036601)	RSPH4A (ENSMODG00000017836)	ZUP1 (ENSMODG00000017831)	KPNA5 (ENSMODG00000017826)	ENSMODG00000036617	GPRC6A (ENSMODG00000017819)	RFX6 (ENSMODG00000017815)	VGLL2 (ENSMODG00000017809)	DCBLD1 (ENSMODG00000017807)	GOPC (ENSMODG00000017803)	ENSMODG00000017800	NUS1 (ENSMODG00000017799)	SLC35F1 (ENSMODG00000046831)	CEP85L (ENSMODG00000017792)
Anura	ANCESTRAL SPECIES	8	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000089228
Frog	MODERN SPECIES	5	marcks (ENSXETG00000027751)	hdac2 (ENSXETG00000007339)	hs3st5 (ENSXETG00000020230)	ENSXETG00000048366	ENSXETG00000042926	ENSXETG00000043493	ENSXETG00000044597	cfap206 (ENSXETG00000006172)	frk (ENSXETG00000006166)	col10a1 (ENSXETG00000033031)	nt5dc1 (ENSXETG00000034706)	dse (ENSXETG00000032776)	calhm6 (ENSXETG00000033644) ##20	calhm5 (ENSXETG00000044076) ##20	trappc3l (ENSXETG00000031870)	calhm4 (ENSXETG00000030384) ##20	birc7 (ENSXETG00000015707)	rwdd1 (ENSXETG00000014077)	XB5843062 [provisional:sult3a1] (ENSXETG00000030056)	zup1 (ENSXETG00000014074)	ENSXETG00000046674	fam162b (ENSXETG00000036478)	XB991396 [provisional:gprc6a] (ENSXETG00000032107)	gprc6a (ENSXETG00000032935)	ENSXETG00000049478	rfx6 (ENSXETG00000033810)	vgll2 (ENSXETG00000014041)	ros1 (ENSXETG00000037537)	ENSXETG00000041661	dcbld1 (ENSXETG00000008572)	ENSXETG00000012885
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000017300	ENSLLEG00000017275	HDAC2 (ENSLLEG00000016537)	ENSLLEG00000016423	HS3ST5 (ENSLLEG00000016380)	ENSLLEG00000016355	ENSLLEG00000016334	ENSLLEG00000016271	FRK (ENSLLEG00000016095)	ENSLLEG00000016041	NT5DC1 (ENSLLEG00000015951)	DSE (ENSLLEG00000015907)	CALHM6 (ENSLLEG00000015877) ##20	CALHM5 (ENSLLEG00000015832) ##20	TRAPPC3L (ENSLLEG00000015749)	CALHM4 (ENSLLEG00000015712) ##20	RWDD1 (ENSLLEG00000015539)	ENSLLEG00000015309	ENSLLEG00000015174	ZUP1 (ENSLLEG00000014981)	ENSLLEG00000014949	FAM162B (ENSLLEG00000014905)	GPRC6A (ENSLLEG00000014835)	ENSLLEG00000014772	ENSLLEG00000014686	ENSLLEG00000014658	ENSLLEG00000014601	ENSLLEG00000014531	ENSLLEG00000026189	ENSLLEG00000026098	RFX6 (ENSLLEG00000025989)
Actinopterygii	ANCESTRAL SPECIES	39	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536	ENSGT00940000155625	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A	ENSGT00940000155184	ENSGT00940000162208	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000156772.b	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Reedfish	MODERN SPECIES	11	ngs (ENSECRG00000004123)	ccnc (ENSECRG00000004082)	ENSECRG00000004062	usp45 (ENSECRG00000003823)	ENSECRG00000003775	coq3 (ENSECRG00000003756)	FAXC (ENSECRG00000003750)	fbxl4 (ENSECRG00000003742)	pou3f2b (ENSECRG00000003737)	ENSECRG00000003733	ENSECRG00000003729	mms22l (ENSECRG00000003698)	klhl32 (ENSECRG00000003614)	calhm6 (ENSECRG00000003558) ##20	calhm5.1 (ENSECRG00000003548) ##20	CALHM4 (ENSECRG00000003540) ##20	rwdd1 (ENSECRG00000003523)	ENSECRG00000003509	ENSECRG00000003501	ENSECRG00000003481	ENSECRG00000003462	ZUP1 (ENSECRG00000003431)	kpna5 (ENSECRG00000003395)	gprc6a (ENSECRG00000003356)	ENSECRG00000003254	ENSECRG00000003214	ENSECRG00000003202	ENSECRG00000003119	rfx6 (ENSECRG00000003016)	vgll2a (ENSECRG00000002955)	dcbld1 (ENSECRG00000002944)
Elephant shark	MODERN SPECIES	1556	rfx6 (ENSCMIG00000006276)	CCN6 (ENSCMIG00000006259)	tube1 (ENSCMIG00000006239)	ENSCMIG00000006232	LAMA4 (ENSCMIG00000005945)	marcksa (ENSCMIG00000005799)	ENSCMIG00000004990	HS3ST5 (ENSCMIG00000004787)	ENSCMIG00000004784	ENSCMIG00000004781	ENSCMIG00000004696	nt5dc1 (ENSCMIG00000004627)	dse (ENSCMIG00000004605)	calhm6 (ENSCMIG00000004602) ##20	ENSCMIG00000004589	CALHM4 (ENSCMIG00000004572) ##20	rwdd1 (ENSCMIG00000004566)	ENSCMIG00000004561	ENSCMIG00000004556	ENSCMIG00000004541
Cyclostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.b.b ##20
Hagfish	MODERN SPECIES	1525	ENSEBUG00000011818	ENSEBUG00000016729	ENSEBUG00000015934	ENSEBUG00000015762	ENSEBUG00000017004	ENSEBUG00000014091	ENSEBUG00000015624	TMEM47 (ENSEBUG00000011164)	ENSEBUG00000005107	ENSEBUG00000016389	ENSEBUG00000003499	ENSEBUG00000002436	ENSEBUG00000011862	ENSEBUG00000005718	dse (ENSEBUG00000004698)	ENSEBUG00000012150 ##20	ENSEBUG00000003171
Vertebrata	ANCESTRAL SPECIES																	ENSGT01030000234610.a ##20
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES	364												ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772
Euteleostomi	ANCESTRAL SPECIES	11	ENSGT00940000159402	ENSGT00940000160000	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Sarcopterygii	ANCESTRAL SPECIES	16	ENSGT00940000164855	ENSGT00940000166133	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00940000164855	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Aves	ANCESTRAL SPECIES	10	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Neognathae_c	ANCESTRAL SPECIES	5					ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Kakapo	MODERN SPECIES	23	ENSSHBG00005017294	ENSSHBG00005017288	ENSSHBG00005017283	FYN (ENSSHBG00005017280)	CCN6 (ENSSHBG00005017277)	ENSSHBG00005017274	TUBE1 (ENSSHBG00005017269)	LAMA4 (ENSSHBG00005004609)	MARCKS (ENSSHBG00005003980)	HDAC2 (ENSSHBG00005003956)	HS3ST5 (ENSSHBG00005003938)	FRK (ENSSHBG00005003903)	ENSSHBG00005003874	NT5DC1 (ENSSHBG00005003851)	DSE (ENSSHBG00005003820)	CALHM6 (ENSSHBG00005003805) ##20	CALHM5 (ENSSHBG00005003799) ##20	TRAPPC3L (ENSSHBG00005003784)	CALHM4 (ENSSHBG00005003749) ##20	RWDD1 (ENSSHBG00005003718)	ZUP1 (ENSSHBG00005003702)	KPNA5 (ENSSHBG00005003578)	FAM162B (ENSSHBG00005003515)	GPRC6A (ENSSHBG00005003502)	RFX6 (ENSSHBG00005003482)	VGLL2 (ENSSHBG00005003458)	ROS1 (ENSSHBG00005003030)	DCBLD1 (ENSSHBG00005002782)	GOPC (ENSSHBG00005002757)	ENSSHBG00005002743	NUS1 (ENSSHBG00005002724)
Golden eagle	MODERN SPECIES	11	REV3L (ENSACCG00020006335)	ENSACCG00020006358	FYN (ENSACCG00020006370)	CCN6 (ENSACCG00020006390)	ENSACCG00020006395	ENSACCG00020006403	ENSACCG00020006409	LAMA4 (ENSACCG00020006424)	MARCKS (ENSACCG00020006456)	HDAC2 (ENSACCG00020006464)	HS3ST5 (ENSACCG00020006476)	FRK (ENSACCG00020006485)	NT5DC1 (ENSACCG00020006495)	ENSACCG00020006507	DSE (ENSACCG00020006515)	ENSACCG00020006525 ##20	TRAPPC3L (ENSACCG00020006542)	CALHM5 (ENSACCG00020006553) ##20	CALHM4 (ENSACCG00020006561) ##20	RWDD1 (ENSACCG00020006571)	ENSACCG00020006579	ZUP1 (ENSACCG00020006610)	KPNA5 (ENSACCG00020006648)	FAM162B (ENSACCG00020006669)	GPRC6A (ENSACCG00020006680)	RFX6 (ENSACCG00020006700)	VGLL2 (ENSACCG00020006724)	ENSACCG00020006739	CEP57L1 (ENSACCG00020006757)	SESN1 (ENSACCG00020006789)	ARMC2 (ENSACCG00020006846)
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Great tit	MODERN SPECIES	22	SLC16A10 (ENSPMJG00000015288)	MFSD4B (ENSPMJG00000015287)	REV3L (ENSPMJG00000015286)	ENSPMJG00000015285	FYN (ENSPMJG00000015284)	CCN6 (ENSPMJG00000015281)	TUBE1 (ENSPMJG00000015280)	LAMA4 (ENSPMJG00000014201)	MARCKS (ENSPMJG00000014178)	HDAC2 (ENSPMJG00000014173)	HS3ST5 (ENSPMJG00000014171)	FRK (ENSPMJG00000014147)	ENSPMJG00000014145	NT5DC1 (ENSPMJG00000014143)	DSE (ENSPMJG00000014142)	CALHM6 (ENSPMJG00000014108) ##20	TRAPPC3L (ENSPMJG00000014105)	CALHM5 (ENSPMJG00000014102) ##20	CALHM4 (ENSPMJG00000014100) ##20	RWDD1 (ENSPMJG00000014098)	ZUP1 (ENSPMJG00000014097)	KPNA5 (ENSPMJG00000014094)	FAM162B (ENSPMJG00000014092)	GPRC6A (ENSPMJG00000014090)	RFX6 (ENSPMJG00000014077)	VGLL2 (ENSPMJG00000014058)	ROS1 (ENSPMJG00000014055)	DCBLD1 (ENSPMJG00000014053)	GOPC (ENSPMJG00000014050)	ENSPMJG00000014049	NUS1 (ENSPMJG00000014047)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Passeroidea	ANCESTRAL SPECIES		ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Zebra finch	MODERN SPECIES	23	ENSTGUG00000019391	ENSTGUG00000012013	FYN (ENSTGUG00000011998)	CCN6 (ENSTGUG00000024640)	ENSTGUG00000011997	TUBE1 (ENSTGUG00000011993)	LAMA4 (ENSTGUG00000011973)	MARCKS (ENSTGUG00000026006)	HDAC2 (ENSTGUG00000011964)	HS3ST5 (ENSTGUG00000011963)	ENSTGUG00000028765	FRK (ENSTGUG00000011957)	NT5DC1 (ENSTGUG00000011946)	ENSTGUG00000011952	DSE (ENSTGUG00000011943)	CALHM6 (ENSTGUG00000011941) ##20	TRAPPC3L (ENSTGUG00000011937)	CALHM5 (ENSTGUG00000011940) ##20	RWDD1 (ENSTGUG00000011932)	ZUP1 (ENSTGUG00000011930)	KPNA5 (ENSTGUG00000011928)	FAM162B (ENSTGUG00000024738)	GPRC6A (ENSTGUG00000011925)	RFX6 (ENSTGUG00000011924)	VGLL2 (ENSTGUG00000011922)	ROS1 (ENSTGUG00000011909)	DCBLD1 (ENSTGUG00000011905)	GOPC (ENSTGUG00000011901)	ENSTGUG00000011898	NUS1 (ENSTGUG00000011892)	SLC35F1 (ENSTGUG00000028242)
Common canary	MODERN SPECIES	1	RPF2 (ENSSCAG00000000033)	SLC16A10 (ENSSCAG00000000026)	MFSD4B (ENSSCAG00000000025)	REV3L (ENSSCAG00000000019)	ENSSCAG00000000009	FYN (ENSSCAG00000000004)	CCN6 (ENSSCAG00000014994)	TUBE1 (ENSSCAG00000014989)	LAMA4 (ENSSCAG00000014967)	HDAC2 (ENSSCAG00000014953)	HS3ST5 (ENSSCAG00000014948)	FRK (ENSSCAG00000014876)	ENSSCAG00000014847	NT5DC1 (ENSSCAG00000014841)	DSE (ENSSCAG00000014836)	CALHM6 (ENSSCAG00000014832) ##20	CALHM5 (ENSSCAG00000014827) ##20	TRAPPC3L (ENSSCAG00000014820)	CALHM4 (ENSSCAG00000014792) ##20	RWDD1 (ENSSCAG00000014762)	ZUP1 (ENSSCAG00000014748)	KPNA5 (ENSSCAG00000014738)	FAM162B (ENSSCAG00000014732)	GPRC6A (ENSSCAG00000014730)	RFX6 (ENSSCAG00000014718)	VGLL2 (ENSSCAG00000014711)	ROS1 (ENSSCAG00000014691)	DCBLD1 (ENSSCAG00000014671)	GOPC (ENSSCAG00000014666)	ENSSCAG00000014659	NUS1 (ENSSCAG00000014650)
Medium ground finch	MODERN SPECIES	9	REV3L (ENSGFOG00000002896)	ENSGFOG00000002949	ENSGFOG00000002969	FYN (ENSGFOG00000002985)	CCN6 (ENSGFOG00000003008)	TUBE1 (ENSGFOG00000003060)	LAMA4 (ENSGFOG00000003411)	ENSGFOG00000007518	HDAC2 (ENSGFOG00000007522)	HS3ST5 (ENSGFOG00000007531)	FRK (ENSGFOG00000007538)	NT5DC1 (ENSGFOG00000007552)	ENSGFOG00000007579	ENSGFOG00000007583	DSE (ENSGFOG00000007589)	CALHM6 (ENSGFOG00000007593) ##20	TRAPPC3L (ENSGFOG00000007597)	CALHM5 (ENSGFOG00000007606) ##20	CALHM4 (ENSGFOG00000007609) ##20	RWDD1 (ENSGFOG00000007640)	ZUP1 (ENSGFOG00000007669)	KPNA5 (ENSGFOG00000007745)	FAM162B (ENSGFOG00000007757)	GPRC6A (ENSGFOG00000007765)	RFX6 (ENSGFOG00000007776)	VGLL2 (ENSGFOG00000007798)	ROS1 (ENSGFOG00000007810)	DCBLD1 (ENSGFOG00000007857)	GOPC (ENSGFOG00000007881)	ENSGFOG00000007920	NUS1 (ENSGFOG00000007937)
Flycatcher	DUPLICATION
Flycatcher	MODERN SPECIES	21	MFSD4B (ENSFALG00000010844)	REV3L (ENSFALG00000010846)	ENSFALG00000010853	FYN (ENSFALG00000010875)	CCN6 (ENSFALG00000028771)	TUBE1 (ENSFALG00000010959)	LAMA4 (ENSFALG00000010965)	HDAC2 (ENSFALG00000010975)	HS3ST5 (ENSFALG00000010977)	FRK (ENSFALG00000010983)	ENSFALG00000028957	ENSFALG00000010995	ENSFALG00000023706	DSE (ENSFALG00000011001)	ENSFALG00000010999 ##20	ENSFALG00000011005 ##20	TRAPPC3L (ENSFALG00000011010)	CALHM5 (ENSFALG00000023025) ##20	CALHM4 (ENSFALG00000011017) ##20	ENSFALG00000028887	RWDD1 (ENSFALG00000024864)	ZUP1 (ENSFALG00000011032)	KPNA5 (ENSFALG00000011039)	FAM162B (ENSFALG00000011046)	GPRC6A (ENSFALG00000011050)	RFX6 (ENSFALG00000011057)	VGLL2 (ENSFALG00000011071)	ROS1 (ENSFALG00000011085)	DCBLD1 (ENSFALG00000011109)	GOPC (ENSFALG00000011117)	ENSFALG00000011131
Flycatcher	MODERN SPECIES	21	SLC16A10 (ENSFALG00000010838)	MFSD4B (ENSFALG00000010844)	REV3L (ENSFALG00000010846)	ENSFALG00000010853	FYN (ENSFALG00000010875)	CCN6 (ENSFALG00000028771)	TUBE1 (ENSFALG00000010959)	LAMA4 (ENSFALG00000010965)	HDAC2 (ENSFALG00000010975)	HS3ST5 (ENSFALG00000010977)	FRK (ENSFALG00000010983)	ENSFALG00000028957	ENSFALG00000010995	ENSFALG00000023706	DSE (ENSFALG00000011001)	ENSFALG00000010999 ##20	ENSFALG00000011005 ##20	TRAPPC3L (ENSFALG00000011010)	CALHM5 (ENSFALG00000023025) ##20	CALHM4 (ENSFALG00000011017) ##20	ENSFALG00000028887	RWDD1 (ENSFALG00000024864)	ZUP1 (ENSFALG00000011032)	KPNA5 (ENSFALG00000011039)	FAM162B (ENSFALG00000011046)	GPRC6A (ENSFALG00000011050)	RFX6 (ENSFALG00000011057)	VGLL2 (ENSFALG00000011071)	ROS1 (ENSFALG00000011085)	DCBLD1 (ENSFALG00000011109)	GOPC (ENSFALG00000011117)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Anatidae	ANCESTRAL SPECIES		ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Pink-footed goose	MODERN SPECIES	43	SLC16A10 (ENSABRG00000000975)	MFSD4B (ENSABRG00000000920)	REV3L (ENSABRG00000000848)	ENSABRG00000000776	FYN (ENSABRG00000000747)	CCN6 (ENSABRG00000000698)	TUBE1 (ENSABRG00000000661)	LAMA4 (ENSABRG00000000629)	MARCKS (ENSABRG00000000577)	HDAC2 (ENSABRG00000000551)	HS3ST5 (ENSABRG00000000532)	FRK (ENSABRG00000000463)	ENSABRG00000000444	NT5DC1 (ENSABRG00000000333)	DSE (ENSABRG00000000313)	CALHM6 (ENSABRG00000000306) ##20	CALHM5 (ENSABRG00000000291) ##20	TRAPPC3L (ENSABRG00000000277)	CALHM4 (ENSABRG00000000249) ##20	RWDD1 (ENSABRG00000000238)
Duck	MODERN SPECIES	21	ENSAPLG00000018317	ENSAPLG00000025315	ENSAPLG00000015277	FYN (ENSAPLG00000014917)	CCN6 (ENSAPLG00000014838)	TUBE1 (ENSAPLG00000014557)	LAMA4 (ENSAPLG00000013937)	ENSAPLG00000021734	MARCKS (ENSAPLG00000030242)	HDAC2 (ENSAPLG00000006926)	HS3ST5 (ENSAPLG00000006908)	FRK (ENSAPLG00000009906)	ENSAPLG00000010244	NT5DC1 (ENSAPLG00000010010)	ENSAPLG00000010250	CALHM6 (ENSAPLG00000010323) ##20	ENSAPLG00000030127	TRAPPC3L (ENSAPLG00000010373)	CALHM4 (ENSAPLG00000010403) ##20	RWDD1 (ENSAPLG00000010404)	ENSAPLG00000004407	ZUP1 (ENSAPLG00000004367)	KPNA5 (ENSAPLG00000003395)	FAM162B (ENSAPLG00000025053)	ENSAPLG00000003079	ENSAPLG00000024644	RFX6 (ENSAPLG00000002929)	VGLL2 (ENSAPLG00000027398)	ROS1 (ENSAPLG00000002159)	DCBLD1 (ENSAPLG00000001269)	GOPC (ENSAPLG00000000612)
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723.g	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723.g	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Chicken	MODERN SPECIES	22	TRAF3IP2 (ENSGALG00010013651)	FYN (ENSGALG00010013604)	CCN6 (ENSGALG00010013521)	ENSGALG00010015164	TUBE1 (ENSGALG00010013508)	LAMA4 (ENSGALG00010013458)	ENSGALG00010013411	MARCKS (ENSGALG00010013402)	HDAC2 (ENSGALG00010013392)	HS3ST5 (ENSGALG00010013363)	ENSGALG00010013350	FRK (ENSGALG00010014602)	COL10A1 (ENSGALG00010012719)	NT5DC1 (ENSGALG00010012690)	DSE (ENSGALG00010012650)	FAM26F (ENSGALG00010014873) ##20	FAM26E (ENSGALG00010014866) ##20	FAM26D (ENSGALG00010014851) ##20	TRAPPC3L (ENSGALG00010014830)	RWDD1 (ENSGALG00010014812)	ENSGALG00010014764	ZUP1 (ENSGALG00010014734)	KPNA5 (ENSGALG00010014707)	FAM162B (ENSGALG00010014653)	GPRC6A (ENSGALG00010014624)	RFX6 (ENSGALG00010012330)	VGLL2 (ENSGALG00010012376)	ROS1 (ENSGALG00010012360)	DCBLD1 (ENSGALG00010012354)	GOPC (ENSGALG00010012341)	ENSGALG00010014560
Turkey	MODERN SPECIES	11	ENSMGAG00000013517	ENSMGAG00000013515	QRSL1 (ENSMGAG00000013518)	ENSMGAG00000022679	ENSMGAG00000018204	ENSMGAG00000013519	ENSMGAG00000013520	ENSMGAG00000013523	ENSMGAG00000013524	OSTM1 (ENSMGAG00000013498)	NR2E1 (ENSMGAG00000013495)	SNX3 (ENSMGAG00000013494)	AFG1L (ENSMGAG00000013490)	ENSMGAG00000013379	ENSMGAG00000018692	ENSMGAG00000013384 ##20	CALHM5 (ENSMGAG00000019395) ##20	ENSMGAG00000013381	ENSMGAG00000013380 ##20	ENSMGAG00000013385	ENSMGAG00000013382	ENSMGAG00000013387	ENSMGAG00000022386	ENSMGAG00000013388	ENSMGAG00000021850	ENSMGAG00000013395	ENSMGAG00000013396	ENSMGAG00000021302	ENSMGAG00000022379	LAMA4 (ENSMGAG00000013404)	ENSMGAG00000017970
Japanese quail	MODERN SPECIES	21	MFSD4B (ENSCJPG00005009240)	REV3L (ENSCJPG00005009239)	ENSCJPG00005009238	FYN (ENSCJPG00005009237)	CCN6 (ENSCJPG00005009235)	TUBE1 (ENSCJPG00005009234)	LAMA4 (ENSCJPG00005009233)	MARCKS (ENSCJPG00005009226)	ENSCJPG00005009224	HDAC2 (ENSCJPG00005009223)	HS3ST5 (ENSCJPG00005009222)	FRK (ENSCJPG00005009218)	ENSCJPG00005009217	NT5DC1 (ENSCJPG00005009216)	DSE (ENSCJPG00005009215)	CALHM6 (ENSCJPG00005009214) ##20	CALHM5 (ENSCJPG00005009213) ##20	TRAPPC3L (ENSCJPG00005009212)	CALHM4 (ENSCJPG00005009211) ##20	RWDD1 (ENSCJPG00005009210)	ENSCJPG00005009209	ENSCJPG00005009208	ZUP1 (ENSCJPG00005009207)	FAM162B (ENSCJPG00005009206)	KPNA5 (ENSCJPG00005009205)	GPRC6A (ENSCJPG00005009204)	RFX6 (ENSCJPG00005009203)	VGLL2 (ENSCJPG00005009201)	ENSCJPG00005009200	ROS1 (ENSCJPG00005009199)	DCBLD1 (ENSCJPG00005009197)
African ostrich	MODERN SPECIES	837										HDAC2 (ENSSCUG00000017413)	HS3ST5 (ENSSCUG00000017412)	FRK (ENSSCUG00000017408)	ENSSCUG00000017407	NT5DC1 (ENSSCUG00000017405)	DSE (ENSSCUG00000017404)	CALHM6 (ENSSCUG00000017403) ##20	CALHM5 (ENSSCUG00000017402) ##20	TRAPPC3L (ENSSCUG00000017401)	CALHM4 (ENSSCUG00000017400) ##20	RWDD1 (ENSSCUG00000017398)	ENSSCUG00000017396	ZUP1 (ENSSCUG00000017391)	KPNA5 (ENSSCUG00000017388)	ENSSCUG00000017386	GPRC6A (ENSSCUG00000017385)	RFX6 (ENSSCUG00000017383)	ROS1 (ENSSCUG00000017377)	DCBLD1 (ENSSCUG00000017375)	GOPC (ENSSCUG00000017372)	ENSSCUG00000017369	NUS1 (ENSSCUG00000017368)
Australian saltwater crocodile	MODERN SPECIES	38	SLC16A10 (ENSCPRG00005001963)	MFSD4B (ENSCPRG00005001968)	REV3L (ENSCPRG00005001980)	ENSCPRG00005001997	FYN (ENSCPRG00005002011)	CCN6 (ENSCPRG00005002029)	ENSCPRG00005002036	TUBE1 (ENSCPRG00005002040)	LAMA4 (ENSCPRG00005002233)	HDAC2 (ENSCPRG00005003350)	HS3ST5 (ENSCPRG00005003370)	FRK (ENSCPRG00005003403)	NT5DC1 (ENSCPRG00005003414)	ENSCPRG00005003419	DSE (ENSCPRG00005003429)	CALHM6 (ENSCPRG00005003433) ##20	TRAPPC3L (ENSCPRG00005003437)	CALHM5 (ENSCPRG00005003444) ##20	ENSCPRG00005003445	CALHM4 (ENSCPRG00005003448) ##20	RWDD1 (ENSCPRG00005003459)	ENSCPRG00005003489	DHRS1 (ENSCPRG00005003677)	ZUP1 (ENSCPRG00005003679)	KPNA5 (ENSCPRG00005003739)	FAM162B (ENSCPRG00005004198)	GPRC6A (ENSCPRG00005004201)	RFX6 (ENSCPRG00005004215)	VGLL2 (ENSCPRG00005004268)	ROS1 (ENSCPRG00005004284)	DCBLD1 (ENSCPRG00005004302)
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT01030000234610.a.b.m ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Testudinoidea	ANCESTRAL SPECIES	32					ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Goode s thornscrub tortoise	DUPLICATION
Goode s thornscrub tortoise	MODERN SPECIES	17	MFSD4B (ENSGEVG00005012609)	REV3L (ENSGEVG00005012666)	ENSGEVG00005012800	FYN (ENSGEVG00005012917)	CCN6 (ENSGEVG00005012988)	ENSGEVG00005013062	TUBE1 (ENSGEVG00005013110)	LAMA4 (ENSGEVG00005013254)	MARCKS (ENSGEVG00005014084)	HDAC2 (ENSGEVG00005014147)	HS3ST5 (ENSGEVG00005014212)	FRK (ENSGEVG00005014318)	NT5DC1 (ENSGEVG00005014775)	ENSGEVG00005015741	DSE (ENSGEVG00005015769)	ENSGEVG00005015788 ##20	ENSGEVG00005015807 ##20	ENSGEVG00005015824 ##20	TRAPPC3L (ENSGEVG00005015848)	ENSGEVG00005015884 ##20	ENSGEVG00005015917	RWDD1 (ENSGEVG00005015958)	ENSGEVG00005015987	ENSGEVG00005016048	DHRS1 (ENSGEVG00005016217)	ZUP1 (ENSGEVG00005016262)	KPNA5 (ENSGEVG00005016291)	FAM162B (ENSGEVG00005016336)	GPRC6A (ENSGEVG00005016365)	RFX6 (ENSGEVG00005016425)	VGLL2 (ENSGEVG00005016536)
Goode s thornscrub tortoise	MODERN SPECIES	17	REV3L (ENSGEVG00005012666)	ENSGEVG00005012800	FYN (ENSGEVG00005012917)	CCN6 (ENSGEVG00005012988)	ENSGEVG00005013062	TUBE1 (ENSGEVG00005013110)	LAMA4 (ENSGEVG00005013254)	MARCKS (ENSGEVG00005014084)	HDAC2 (ENSGEVG00005014147)	HS3ST5 (ENSGEVG00005014212)	FRK (ENSGEVG00005014318)	NT5DC1 (ENSGEVG00005014775)	ENSGEVG00005015741	DSE (ENSGEVG00005015769)	ENSGEVG00005015788 ##20	ENSGEVG00005015807 ##20	ENSGEVG00005015824 ##20	TRAPPC3L (ENSGEVG00005015848)	ENSGEVG00005015884 ##20	ENSGEVG00005015917	RWDD1 (ENSGEVG00005015958)	ENSGEVG00005015987	ENSGEVG00005016048	DHRS1 (ENSGEVG00005016217)	ZUP1 (ENSGEVG00005016262)	KPNA5 (ENSGEVG00005016291)	FAM162B (ENSGEVG00005016336)	GPRC6A (ENSGEVG00005016365)	RFX6 (ENSGEVG00005016425)	VGLL2 (ENSGEVG00005016536)	ROS1 (ENSGEVG00005016750)
Abingdon island giant tortoise	MODERN SPECIES	650															DSE (ENSCABG00000015800)	CALHM6 (ENSCABG00000015797) ##20
Emydidae	ANCESTRAL SPECIES																	ENSGT01030000234610.a.a ##20
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	1937															ENSCPBG00000011472 ##20	ENSCPBG00000011473 ##20
painted turtle	MODERN SPECIES	1937																ENSCPBG00000011472 ##20	ENSCPBG00000011473 ##20
Three-toed box turtle	DUPLICATION
Three-toed box turtle	DUPLICATION
Three-toed box turtle	MODERN SPECIES	2686															ENSTMTG00000012727 ##20	ENSTMTG00000012735 ##20
Three-toed box turtle	MODERN SPECIES	2686																ENSTMTG00000012727 ##20	ENSTMTG00000012735 ##20
Three-toed box turtle	MODERN SPECIES	2678																ENSTMTG00000012650 ##20
Chinese turtle	DUPLICATION
Chinese turtle	MODERN SPECIES	1101	MFSD4B (ENSPSIG00000003739)	REV3L (ENSPSIG00000003779)	ENSPSIG00000003815	FYN (ENSPSIG00000003826)	CCN6 (ENSPSIG00000004042)	TUBE1 (ENSPSIG00000004054)	LAMA4 (ENSPSIG00000004066)	ENSPSIG00000001214	MARCKS (ENSPSIG00000004404)	HDAC2 (ENSPSIG00000004413)	HS3ST5 (ENSPSIG00000004541)	FRK (ENSPSIG00000004668)	NT5DC1 (ENSPSIG00000004784)	ENSPSIG00000004859	DSE (ENSPSIG00000004879)	ENSPSIG00000004992 ##20	ENSPSIG00000005155 ##20	TRAPPC3L (ENSPSIG00000005260)	CALHM5 (ENSPSIG00000005270) ##20	RWDD1 (ENSPSIG00000005283)	ENSPSIG00000005405	ENSPSIG00000005520	ENSPSIG00000005761
Chinese turtle	MODERN SPECIES	1101	REV3L (ENSPSIG00000003779)	ENSPSIG00000003815	FYN (ENSPSIG00000003826)	CCN6 (ENSPSIG00000004042)	TUBE1 (ENSPSIG00000004054)	LAMA4 (ENSPSIG00000004066)	ENSPSIG00000001214	MARCKS (ENSPSIG00000004404)	HDAC2 (ENSPSIG00000004413)	HS3ST5 (ENSPSIG00000004541)	FRK (ENSPSIG00000004668)	NT5DC1 (ENSPSIG00000004784)	ENSPSIG00000004859	DSE (ENSPSIG00000004879)	ENSPSIG00000004992 ##20	ENSPSIG00000005155 ##20	TRAPPC3L (ENSPSIG00000005260)	CALHM5 (ENSPSIG00000005270) ##20	RWDD1 (ENSPSIG00000005283)	ENSPSIG00000005405	ENSPSIG00000005520	ENSPSIG00000005761
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Episquamata	ANCESTRAL SPECIES		ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Toxicofera	ANCESTRAL SPECIES		ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Elapidae	ANCESTRAL SPECIES		ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT00390000009168.cc.a	ENSGT00940000156772.pb.b	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535.l	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a	ENSGT00390000002403
Elapidae_a	ANCESTRAL SPECIES	6	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b.d	ENSGT00940000160119.b.c	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT00390000009168.cc.a
Acanthophiinae	ANCESTRAL SPECIES	8	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b.d	ENSGT00940000160119.b.c	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT00390000009168.cc.a
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	876															ENSNSUG00000006319	ENSNSUG00000006318 ##20	ENSNSUG00000006317
Mainland tiger snake	MODERN SPECIES	877															ENSNSUG00000006322	ENSNSUG00000006321 ##20	ENSNSUG00000006320
Eastern brown snake	MODERN SPECIES	4	REV3L (ENSPTXG00000014034)	ENSPTXG00000014027	FYN (ENSPTXG00000014022)	ENSPTXG00000014021	ENSPTXG00000014019	TUBE1 (ENSPTXG00000014018)	LAMA4 (ENSPTXG00000014017)	ENSPTXG00000014015	MARCKS (ENSPTXG00000014014)	HDAC2 (ENSPTXG00000014011)	HS3ST5 (ENSPTXG00000014009)	FRK (ENSPTXG00000014008)	ENSPTXG00000014007	NT5DC1 (ENSPTXG00000014006)	DSE (ENSPTXG00000014005)	CALHM6 (ENSPTXG00000014004) ##20	TRAPPC3L (ENSPTXG00000014003)	ENSPTXG00000014002	RWDD1 (ENSPTXG00000014001)
Blue-lipped sea krait	MODERN SPECIES	10367																CALHM6 (ENSLLTG00000009962) ##20
Indian cobra	MODERN SPECIES		SLC16A10 (ENSNNAG00000000497)	MFSD4B (ENSNNAG00000000483)	REV3L (ENSNNAG00000000449)	ENSNNAG00000000428	FYN (ENSNNAG00000000407)	CCN6 (ENSNNAG00000000390)	TUBE1 (ENSNNAG00000000365)	LAMA4 (ENSNNAG00000000292)	MARCKS (ENSNNAG00000000279)	HDAC2 (ENSNNAG00000000273)	HS3ST5 (ENSNNAG00000000269)	FRK (ENSNNAG00000000261)	ENSNNAG00000000244	NT5DC1 (ENSNNAG00000006145)	DSE (ENSNNAG00000006130)	CALHM6 (ENSNNAG00000006117) ##20	TRAPPC3L (ENSNNAG00000006090)	ENSNNAG00000006065	RWDD1 (ENSNNAG00000006016)	ENSNNAG00000005994	ENSNNAG00000005971	ENSNNAG00000005915	ENSNNAG00000005895	ENSNNAG00000005723	ENSNNAG00000005682	ZUP1 (ENSNNAG00000005640)	KPNA5 (ENSNNAG00000005601)	GPRC6A (ENSNNAG00000005575)	RFX6 (ENSNNAG00000005505)	VGLL2 (ENSNNAG00000005489)	DCBLD1 (ENSNNAG00000005461)
Lizard	MODERN SPECIES		ENSACAG00000041330	ENSACAG00000037386	MARCKS (ENSACAG00000012165)	HDAC2 (ENSACAG00000012174)	ENSACAG00000037660	ENSACAG00000045149	HS3ST5 (ENSACAG00000012310)	ENSACAG00000028800	ENSACAG00000025786	ENSACAG00000025602	ENSACAG00000044190	FRK (ENSACAG00000012316)	COL10A1 (ENSACAG00000012503)	ENSACAG00000012457	DSE (ENSACAG00000013791)	CALHM6 (ENSACAG00000035788) ##20	TRAPPC3L (ENSACAG00000040856)	RWDD1 (ENSACAG00000013868)	ENSACAG00000029503	ENSACAG00000041992	ENSACAG00000013979	ENSACAG00000042843	ENSACAG00000013906	ENSACAG00000028542	ENSACAG00000039059	ZUP1 (ENSACAG00000013995)	KPNA5 (ENSACAG00000014041)	FAM162B (ENSACAG00000036825)	GPRC6A (ENSACAG00000014169)	RFX6 (ENSACAG00000014185)	VGLL2 (ENSACAG00000014238)
Laterata	ANCESTRAL SPECIES	4	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Common wall lizard	MODERN SPECIES	11	FYN (ENSPMRG00000003480)	ENSPMRG00000003488	ENSPMRG00000003491	TUBE1 (ENSPMRG00000003497)	LAMA4 (ENSPMRG00000003793)	ENSPMRG00000005961	MARCKS (ENSPMRG00000005971)	ENSPMRG00000005981	HDAC2 (ENSPMRG00000005993)	HS3ST5 (ENSPMRG00000006020)	ENSPMRG00000006026	FRK (ENSPMRG00000006034)	NT5DC1 (ENSPMRG00000006051)	ENSPMRG00000006068	DSE (ENSPMRG00000006073)	CALHM6 (ENSPMRG00000006078) ##20	TRAPPC3L (ENSPMRG00000006082)	RWDD1 (ENSPMRG00000006088)	ENSPMRG00000006121	ENSPMRG00000006159	ENSPMRG00000006165	ENSPMRG00000006182	ENSPMRG00000006208	GPRC6A (ENSPMRG00000006219)	RFX6 (ENSPMRG00000006227)	DCBLD1 (ENSPMRG00000006247)	ENSPMRG00000006271	GOPC (ENSPMRG00000006277)	ENSPMRG00000006290	SLC35F1 (ENSPMRG00000006298)	CEP85L (ENSPMRG00000006312)
Argentine black and white tegu	MODERN SPECIES	2	REV3L (ENSSMRG00000012740)	ENSSMRG00000012733	FYN (ENSSMRG00000012730)	CCN6 (ENSSMRG00000012721)	TUBE1 (ENSSMRG00000012720)	LAMA4 (ENSSMRG00000012719)	ENSSMRG00000012697	MARCKS (ENSSMRG00000012654)	HDAC2 (ENSSMRG00000012652)	HS3ST5 (ENSSMRG00000012651)	FRK (ENSSMRG00000012619)	ENSSMRG00000012599	COL10A1 (ENSSMRG00000012598)	NT5DC1 (ENSSMRG00000012597)	DSE (ENSSMRG00000012596)	CALHM6 (ENSSMRG00000012565) ##20	TRAPPC3L (ENSSMRG00000012562)	RWDD1 (ENSSMRG00000012560)	ENSSMRG00000012552	ENSSMRG00000012525	ENSSMRG00000012524	ENSSMRG00000012522	ENSSMRG00000012521	ZUP1 (ENSSMRG00000012520)	KPNA5 (ENSSMRG00000012499)	FAM162B (ENSSMRG00000012498)	GPRC6A (ENSSMRG00000012497)	RFX6 (ENSSMRG00000012496)	ENSSMRG00000012485	VGLL2 (ENSSMRG00000012484)	DCBLD1 (ENSSMRG00000012481)
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000156226	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000003880.b.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Platypus	MODERN SPECIES	11	ECRG4 (ENSOANG00000044766)	UXS1 (ENSOANG00000029305)	ENSOANG00000051170	ST6GAL2 (ENSOANG00000011147)	SLC5A7 (ENSOANG00000050883)	MALL (ENSOANG00000013121)	HDAC2 (ENSOANG00000003631)	HS3ST5 (ENSOANG00000010980)	FRK (ENSOANG00000029704)	COL10A1 (ENSOANG00000044747)	NT5DC1 (ENSOANG00000040723)	DSE (ENSOANG00000050170)	ENSOANG00000045905 ##20	CALHM5 (ENSOANG00000006298) ##20	TRAPPC3L (ENSOANG00000006297)	ENSOANG00000038481 ##20	RWDD1 (ENSOANG00000045892)	ENSOANG00000020699	ENSOANG00000012469	RSPH4A (ENSOANG00000012472)	ZUP1 (ENSOANG00000013491)	KPNA5 (ENSOANG00000038435)	RFX6 (ENSOANG00000004002)	VGLL2 (ENSOANG00000044125)	ROS1 (ENSOANG00000012474)	DCBLD1 (ENSOANG00000043449)	GOPC (ENSOANG00000003691)	ENSOANG00000003967	NUS1 (ENSOANG00000048113)	ENSOANG00000002055	SLC35F1 (ENSOANG00000030027)
Theria	ANCESTRAL SPECIES	4	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Diprotodontia_a	ANCESTRAL SPECIES	23	ENSGT00530000063320.B.db	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
koala	MODERN SPECIES	216											FRK (ENSPCIG00000008683)	NT5DC1 (ENSPCIG00000008684)	ENSPCIG00000034146	DSE (ENSPCIG00000008687)	ENSPCIG00000008688	ENSPCIG00000008689 ##20	ENSPCIG00000008693 ##20	TRAPPC3L (ENSPCIG00000008694)	CALHM5 (ENSPCIG00000031293) ##20	CALHM4 (ENSPCIG00000008698) ##20	ENSPCIG00000023060	ENSPCIG00000023063	RSPH4A (ENSPCIG00000023064)	ZUP1 (ENSPCIG00000023066)	KPNA5 (ENSPCIG00000023067)	ENSPCIG00000009100	RFX6 (ENSPCIG00000023071)	ENSPCIG00000031623	DCBLD1 (ENSPCIG00000023078)	GOPC (ENSPCIG00000023081)	ENSPCIG00000023085
Wallaby	MODERN SPECIES	11074																ENSMEUG00000012429 ##20
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	3	FYN (ENSSHAG00000010594)	CCN6 (ENSSHAG00000013692)	TUBE1 (ENSSHAG00000013871)	FAM229B (ENSSHAG00000014011)	LAMA4 (ENSSHAG00000014100)	ENSSHAG00000030163	MARCKS (ENSSHAG00000032396)	HDAC2 (ENSSHAG00000029979)	HS3ST5 (ENSSHAG00000026218)	ENSSHAG00000021743	FRK (ENSSHAG00000018366)	ENSSHAG00000018580	NT5DC1 (ENSSHAG00000018559)	DSE (ENSSHAG00000000534)	ENSSHAG00000025331 ##20	ENSSHAG00000004138 ##20	CALHM5 (ENSSHAG00000023597) ##20	TRAPPC3L (ENSSHAG00000005649)	CALHM4 (ENSSHAG00000006568) ##20	ENSSHAG00000025679	RWDD1 (ENSSHAG00000030217)	RSPH4A (ENSSHAG00000007508)	ZUP1 (ENSSHAG00000017118)	KPNA5 (ENSSHAG00000008042)	GPRC6A (ENSSHAG00000008754)	RFX6 (ENSSHAG00000009393)	ENSSHAG00000011540	DCBLD1 (ENSSHAG00000023740)	GOPC (ENSSHAG00000013357)	ENSSHAG00000013766	NUS1 (ENSSHAG00000031483)
Tasmanian devil	MODERN SPECIES	3	TRAF3IP2 (ENSSHAG00000009775)	FYN (ENSSHAG00000010594)	CCN6 (ENSSHAG00000013692)	TUBE1 (ENSSHAG00000013871)	FAM229B (ENSSHAG00000014011)	LAMA4 (ENSSHAG00000014100)	ENSSHAG00000030163	MARCKS (ENSSHAG00000032396)	HDAC2 (ENSSHAG00000029979)	HS3ST5 (ENSSHAG00000026218)	ENSSHAG00000021743	FRK (ENSSHAG00000018366)	ENSSHAG00000018580	NT5DC1 (ENSSHAG00000018559)	DSE (ENSSHAG00000000534)	ENSSHAG00000025331 ##20	ENSSHAG00000004138 ##20	CALHM5 (ENSSHAG00000023597) ##20	TRAPPC3L (ENSSHAG00000005649)	CALHM4 (ENSSHAG00000006568) ##20	ENSSHAG00000025679	RWDD1 (ENSSHAG00000030217)	RSPH4A (ENSSHAG00000007508)	ZUP1 (ENSSHAG00000017118)	KPNA5 (ENSSHAG00000008042)	GPRC6A (ENSSHAG00000008754)	RFX6 (ENSSHAG00000009393)	ENSSHAG00000011540	DCBLD1 (ENSSHAG00000023740)	GOPC (ENSSHAG00000013357)	ENSSHAG00000013766
Opossum	MODERN SPECIES	1	FAM229B (ENSMODG00000017886)	LAMA4 (ENSMODG00000017881)	MARCKS (ENSMODG00000045740)	HDAC2 (ENSMODG00000017860)	ENSMODG00000037190	HS3ST5 (ENSMODG00000036869)	ENSMODG00000016446	ENSMODG00000042919	ENSMODG00000028476	ENSMODG00000038439	FRK (ENSMODG00000017852)	NT5DC1 (ENSMODG00000017849)	ENSMODG00000050348	ENSMODG00000017850	DSE (ENSMODG00000017846)	ENSMODG00000017842 ##20	ENSMODG00000017841 ##20	TRAPPC3L (ENSMODG00000023338)	CALHM5 (ENSMODG00000017840) ##20	CALHM4 (ENSMODG00000017838) ##20	ENSMODG00000005764	RWDD1 (ENSMODG00000036601)	RSPH4A (ENSMODG00000017836)	ZUP1 (ENSMODG00000017831)	KPNA5 (ENSMODG00000017826)	ENSMODG00000036617	GPRC6A (ENSMODG00000017819)	RFX6 (ENSMODG00000017815)	VGLL2 (ENSMODG00000017809)	DCBLD1 (ENSMODG00000017807)	GOPC (ENSMODG00000017803)
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00390000003223	ENSGT00940000162914	ENSGT00940000156535	ENSGT00940000157334	ENSGT00530000063353.a.b.a	ENSGT01050000244879.b.a.b.b	ENSGT00940000158416	ENSGT01050000244950.a.a.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00390000009168	ENSGT00940000160861.a	ENSGT01030000234610.b.b ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.a.n ##20	ENSGT01030000234610.a.a.m ##20	ENSGT00390000006522.b	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000156987	ENSGT00940000158991	ENSGT00940000155725	ENSGT00730000111419	ENSGT00940000159970	ENSGT00390000017996.b	ENSGT00940000155723	ENSGT00940000160119	ENSGT00940000155462	ENSGT00940000161944	ENSGT00940000156226
Opossum	MODERN SPECIES	1	ENSMODG00000017800	GOPC (ENSMODG00000017803)	DCBLD1 (ENSMODG00000017807)	VGLL2 (ENSMODG00000017809)	RFX6 (ENSMODG00000017815)	GPRC6A (ENSMODG00000017819)	ENSMODG00000036617	KPNA5 (ENSMODG00000017826)	ZUP1 (ENSMODG00000017831)	RSPH4A (ENSMODG00000017836)	RWDD1 (ENSMODG00000036601)	ENSMODG00000005764	CALHM4 (ENSMODG00000017838) ##20	CALHM5 (ENSMODG00000017840) ##20	TRAPPC3L (ENSMODG00000023338)	ENSMODG00000017841 ##20	ENSMODG00000017842 ##20	DSE (ENSMODG00000017846)	ENSMODG00000017850	ENSMODG00000050348	NT5DC1 (ENSMODG00000017849)	FRK (ENSMODG00000017852)	ENSMODG00000038439	ENSMODG00000028476	ENSMODG00000042919	ENSMODG00000016446	HS3ST5 (ENSMODG00000036869)	ENSMODG00000037190	HDAC2 (ENSMODG00000017860)	MARCKS (ENSMODG00000045740)	LAMA4 (ENSMODG00000017881)
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00390000003223	ENSGT00940000162914	ENSGT00940000156535	ENSGT00940000157334	ENSGT00530000063353.a.b.a	ENSGT01050000244879.b.a.b.b	ENSGT00940000158416	ENSGT01050000244950.a.a.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00390000009168	ENSGT00940000160861.a	ENSGT01030000234610.b.b ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.a.n ##20	ENSGT01030000234610.a.a.m ##20	ENSGT00390000006522.b	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000156987	ENSGT00940000158991	ENSGT00940000155725	ENSGT00730000111419	ENSGT00940000159970	ENSGT00390000017996.b	ENSGT00940000155723	ENSGT00940000160119	ENSGT00940000155462	ENSGT00940000161944	ENSGT00940000156226
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00390000003223	ENSGT00940000162914	ENSGT00940000156535	ENSGT00940000157334	ENSGT00530000063353.a.b.a	ENSGT01050000244879.b.a.b.b	ENSGT00940000158416	ENSGT01050000244950.a.a.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00390000009168	ENSGT00940000160861.a	ENSGT01030000234610.b.b ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.a.n ##20	ENSGT01030000234610.a.a.m ##20	ENSGT00390000006522.b	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000156987	ENSGT00940000158991	ENSGT00940000155725	ENSGT00730000111419	ENSGT00940000159970	ENSGT00390000017996.b	ENSGT00940000155723	ENSGT00940000160119	ENSGT00940000155462	ENSGT00940000161944	ENSGT00940000156226
Diprotodontia_a	ANCESTRAL SPECIES	23	ENSGT00390000003223	ENSGT00940000162914	ENSGT00940000156535	ENSGT00940000157334	ENSGT00530000063353.a.b.a	ENSGT01050000244879.b.a.b.b	ENSGT00940000158416	ENSGT01050000244950.a.a.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00390000009168	ENSGT00940000160861.a	ENSGT01030000234610.b.b ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.a.n ##20	ENSGT01030000234610.a.a.m ##20	ENSGT00390000006522.b	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000156987	ENSGT00940000158991	ENSGT00940000155725	ENSGT00730000111419	ENSGT00940000159970	ENSGT00390000017996.b	ENSGT00940000155723	ENSGT00940000160119	ENSGT00940000155462	ENSGT00940000161944	ENSGT00940000156226
koala	MODERN SPECIES	216	NUS1 (ENSPCIG00000022299)	ENSPCIG00000023085	GOPC (ENSPCIG00000023081)	DCBLD1 (ENSPCIG00000023078)	ENSPCIG00000031623	RFX6 (ENSPCIG00000023071)	ENSPCIG00000009100	KPNA5 (ENSPCIG00000023067)	ZUP1 (ENSPCIG00000023066)	RSPH4A (ENSPCIG00000023064)	ENSPCIG00000023063	ENSPCIG00000023060	CALHM4 (ENSPCIG00000008698) ##20	CALHM5 (ENSPCIG00000031293) ##20	TRAPPC3L (ENSPCIG00000008694)	ENSPCIG00000008693 ##20	ENSPCIG00000008689 ##20	ENSPCIG00000008688	DSE (ENSPCIG00000008687)	ENSPCIG00000034146	NT5DC1 (ENSPCIG00000008684)	FRK (ENSPCIG00000008683)
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Xenarthra	ANCESTRAL SPECIES	168													ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Sloth	MODERN SPECIES	8776																CALHM6 (ENSCHOG00000007099) ##20
Armadillo	DUPLICATION
Armadillo	MODERN SPECIES	2810						ENSDNOG00000047872	VWC2 (ENSDNOG00000024647)	ENSDNOG00000049577	FRK (ENSDNOG00000010080)	ENSDNOG00000007860	ENSDNOG00000030677	TSPYL4 (ENSDNOG00000042279)	ENSDNOG00000039632	ENSDNOG00000046391	DSE (ENSDNOG00000045714)	ENSDNOG00000045345 ##20	CALHM5 (ENSDNOG00000036788) ##20	CALHM4 (ENSDNOG00000007514) ##20	ENSDNOG00000007516	ENSDNOG00000044348	ENSDNOG00000039401	ENSDNOG00000038517	ENSDNOG00000025447	RSPH4A (ENSDNOG00000001347)	ZUP1 (ENSDNOG00000044598)	KPNA5 (ENSDNOG00000005326)	FAM162B (ENSDNOG00000038676)	GPRC6A (ENSDNOG00000019148)	RFX6 (ENSDNOG00000019162)	VGLL2 (ENSDNOG00000044127)	ROS1 (ENSDNOG00000010519)
Armadillo	MODERN SPECIES	3224																ENSDNOG00000037198 ##20
Afrotheria	ANCESTRAL SPECIES	13	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Tenrec	MODERN SPECIES	1360															DSE (ENSETEG00000019078)	CALHM6 (ENSETEG00000019081) ##20	TRAPPC3L (ENSETEG00000019083)	CALHM5 (ENSETEG00000019084) ##20	RWDD1 (ENSETEG00000019085)
Afrotheria_a	ANCESTRAL SPECIES	13	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Elephant	DUPLICATION
Elephant	MODERN SPECIES	1	FYN (ENSLAFG00000002604)	CCN6 (ENSLAFG00000004071)	TUBE1 (ENSLAFG00000004073)	FAM229B (ENSLAFG00000030627)	LAMA4 (ENSLAFG00000004076)	ENSLAFG00000029012	RFPL4B (ENSLAFG00000021578)	HDAC2 (ENSLAFG00000005566)	HS3ST5 (ENSLAFG00000010686)	FRK (ENSLAFG00000005589)	COL10A1 (ENSLAFG00000022123)	TSPYL4 (ENSLAFG00000010254)	ENSLAFG00000027418	DSE (ENSLAFG00000009134)	ENSLAFG00000012702 ##20	ENSLAFG00000017416 ##20	CALHM5 (ENSLAFG00000008490) ##20	TRAPPC3L (ENSLAFG00000008487)	CALHM4 (ENSLAFG00000027569) ##20	ENSLAFG00000008170	ENSLAFG00000026707	ENSLAFG00000028750	RSPH4A (ENSLAFG00000003514)	ZUP1 (ENSLAFG00000017345)	KPNA5 (ENSLAFG00000003824)	FAM162B (ENSLAFG00000003827)	GPRC6A (ENSLAFG00000003462)	RFX6 (ENSLAFG00000003465)	VGLL2 (ENSLAFG00000009803)	ROS1 (ENSLAFG00000009804)	DCBLD1 (ENSLAFG00000009399)
Elephant	MODERN SPECIES	1	TRAF3IP2 (ENSLAFG00000004974)	FYN (ENSLAFG00000002604)	CCN6 (ENSLAFG00000004071)	TUBE1 (ENSLAFG00000004073)	FAM229B (ENSLAFG00000030627)	LAMA4 (ENSLAFG00000004076)	ENSLAFG00000029012	RFPL4B (ENSLAFG00000021578)	HDAC2 (ENSLAFG00000005566)	HS3ST5 (ENSLAFG00000010686)	FRK (ENSLAFG00000005589)	COL10A1 (ENSLAFG00000022123)	TSPYL4 (ENSLAFG00000010254)	ENSLAFG00000027418	DSE (ENSLAFG00000009134)	ENSLAFG00000012702 ##20	ENSLAFG00000017416 ##20	CALHM5 (ENSLAFG00000008490) ##20	TRAPPC3L (ENSLAFG00000008487)	CALHM4 (ENSLAFG00000027569) ##20	ENSLAFG00000008170	ENSLAFG00000026707	ENSLAFG00000028750	RSPH4A (ENSLAFG00000003514)	ZUP1 (ENSLAFG00000017345)	KPNA5 (ENSLAFG00000003824)	FAM162B (ENSLAFG00000003827)	GPRC6A (ENSLAFG00000003462)	RFX6 (ENSLAFG00000003465)	VGLL2 (ENSLAFG00000009803)	ROS1 (ENSLAFG00000009804)
Hyrax	DUPLICATION
Hyrax	MODERN SPECIES	6666																ENSPCAG00000004858 ##20	TRAPPC3L (ENSPCAG00000004945)	CALHM5 (ENSPCAG00000004982) ##20	CALHM4 (ENSPCAG00000005003) ##20	RWDD1 (ENSPCAG00000005016)
Hyrax	MODERN SPECIES	8124																ENSPCAG00000000276 ##20
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Primates	ANCESTRAL SPECIES	5	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Hominidae	ANCESTRAL SPECIES	5	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00940000159970	ENSGT00940000163194	ENSGT00910000148685	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00940000159970	ENSGT00940000163194	ENSGT00910000148685	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Pan	ANCESTRAL SPECIES	5	ENSGT00910000147633	ENSGT00940000159970	ENSGT00910000148685	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Chimpanzee	MODERN SPECIES	19	ENSPTRG00000049984	MARCKS (ENSPTRG00000018517)	HDAC2 (ENSPTRG00000018519)	HS3ST5 (ENSPTRG00000018520)	ENSPTRG00000051719	FRK (ENSPTRG00000018521)	ENSPTRG00000045932	NT5DC1 (ENSPTRG00000018523)	COL10A1 (ENSPTRG00000018524)	ENSPTRG00000048668	TSPYL4 (ENSPTRG00000023905)	ENSPTRG00000051033	TSPYL1 (ENSPTRG00000018528)	DSE (ENSPTRG00000018529)	TRAPPC3L (ENSPTRG00000050736)	CALHM6 (ENSPTRG00000018530) ##20	CALHM5 (ENSPTRG00000048761) ##20	CALHM4 (ENSPTRG00000018532) ##20	RWDD1 (ENSPTRG00000018534)	RSPH4A (ENSPTRG00000018535)	ZUP1 (ENSPTRG00000018536)	KPNA5 (ENSPTRG00000018537)	FAM162B (ENSPTRG00000018538)	GPRC6A (ENSPTRG00000018539)	RFX6 (ENSPTRG00000018540)	VGLL2 (ENSPTRG00000018542)	ROS1 (ENSPTRG00000018544)	DCBLD1 (ENSPTRG00000018545)	GOPC (ENSPTRG00000018546)	ENSPTRG00000044107	ENSPTRG00000018547
Bonobo	MODERN SPECIES	19	ENSPPAG00000030107	ENSPPAG00000007868	ENSPPAG00000043260	HDAC2 (ENSPPAG00000033144)	HS3ST5 (ENSPPAG00000026905)	ENSPPAG00000037500	FRK (ENSPPAG00000037662)	ENSPPAG00000009764	ENSPPAG00000008350	COL10A1 (ENSPPAG00000029466)	ENSPPAG00000034902	TSPYL4 (ENSPPAG00000025665)	ENSPPAG00000037203	TSPYL1 (ENSPPAG00000010073)	DSE (ENSPPAG00000039304)	CALHM6 (ENSPPAG00000040382) ##20	TRAPPC3L (ENSPPAG00000043671)	CALHM5 (ENSPPAG00000039792) ##20	ENSPPAG00000019471 ##20	RWDD1 (ENSPPAG00000035047)	RSPH4A (ENSPPAG00000039243)	ZUP1 (ENSPPAG00000026765)	KPNA5 (ENSPPAG00000033134)	FAM162B (ENSPPAG00000042060)	GPRC6A (ENSPPAG00000032903)	RFX6 (ENSPPAG00000010113)	VGLL2 (ENSPPAG00000043248)	ROS1 (ENSPPAG00000040274)	DCBLD1 (ENSPPAG00000030913)	GOPC (ENSPPAG00000042271)	ENSPPAG00000017927
Human	MODERN SPECIES	18	TUBE1 (ENSG00000074935)	FAM229B (ENSG00000203778)	LAMA4 (ENSG00000112769)	ENSG00000281613	RFPL4B (ENSG00000251258)	MARCKS (ENSG00000277443)	HDAC2 (ENSG00000196591)	HS3ST5 (ENSG00000249853)	FRK (ENSG00000111816)	NT5DC1 (ENSG00000178425)	COL10A1 (ENSG00000123500)	TSPYL4 (ENSG00000187189)	DSE (ENSG00000111817)	TSPYL1 (ENSG00000189241)	ENSG00000285446	CALHM6 (ENSG00000188820) ##20	TRAPPC3L (ENSG00000173626)	CALHM5 (ENSG00000178033) ##20	CALHM4 (ENSG00000164451) ##20	RWDD1 (ENSG00000111832)	RSPH4A (ENSG00000111834)	ZUP1 (ENSG00000153975)	KPNA5 (ENSG00000196911)	FAM162B (ENSG00000183807)	GPRC6A (ENSG00000173612)	RFX6 (ENSG00000185002)	VGLL2 (ENSG00000170162)	ROS1 (ENSG00000047936)	ENSG00000282218	DCBLD1 (ENSG00000164465)	GOPC (ENSG00000047932)
Gorilla	MODERN SPECIES	19	LAMA4 (ENSGGOG00000015003)	ENSGGOG00000037491	ENSGGOG00000037075	ENSGGOG00000006107	HDAC2 (ENSGGOG00000005428)	HS3ST5 (ENSGGOG00000001108)	FRK (ENSGGOG00000034876)	ENSGGOG00000039649	NT5DC1 (ENSGGOG00000007465)	COL10A1 (ENSGGOG00000023907)	ENSGGOG00000037308	TSPYL4 (ENSGGOG00000025875)	ENSGGOG00000024360	TSPYL1 (ENSGGOG00000016740)	DSE (ENSGGOG00000026746)	CALHM6 (ENSGGOG00000001375) ##20	TRAPPC3L (ENSGGOG00000036719)	CALHM5 (ENSGGOG00000039336) ##20	CALHM4 (ENSGGOG00000017144) ##20	RWDD1 (ENSGGOG00000026889)	ENSGGOG00000016793	ZUP1 (ENSGGOG00000016798)	KPNA5 (ENSGGOG00000011906)	FAM162B (ENSGGOG00000002045)	GPRC6A (ENSGGOG00000001199)	RFX6 (ENSGGOG00000006982)	VGLL2 (ENSGGOG00000014045)	ROS1 (ENSGGOG00000014048)	DCBLD1 (ENSGGOG00000001188)	GOPC (ENSGGOG00000013555)	NUS1 (ENSGGOG00000022321)
Orangutan	MODERN SPECIES	19	ENSPPYG00000040581	RFPL4B (ENSPPYG00000016936)	ENSPPYG00000016937	MARCKS (ENSPPYG00000035269)	ENSPPYG00000016939	HDAC2 (ENSPPYG00000016940)	HS3ST5 (ENSPPYG00000039787)	FRK (ENSPPYG00000016942)	NT5DC1 (ENSPPYG00000016943)	COL10A1 (ENSPPYG00000016944)	ENSPPYG00000035177	TSPYL4 (ENSPPYG00000040233)	ENSPPYG00000035461	TSPYL1 (ENSPPYG00000035346)	DSE (ENSPPYG00000016948)	CALHM6 (ENSPPYG00000016949) ##20	TRAPPC3L (ENSPPYG00000016950)	CALHM5 (ENSPPYG00000016951) ##20	CALHM4 (ENSPPYG00000016952) ##20	RWDD1 (ENSPPYG00000016953)	RSPH4A (ENSPPYG00000016954)	ZUP1 (ENSPPYG00000016956)	KPNA5 (ENSPPYG00000016957)	FAM162B (ENSPPYG00000016958)	GPRC6A (ENSPPYG00000016959)	RFX6 (ENSPPYG00000016960)	VGLL2 (ENSPPYG00000016961)	ROS1 (ENSPPYG00000016962)	DCBLD1 (ENSPPYG00000016963)	GOPC (ENSPPYG00000016964)	NUS1 (ENSPPYG00000025886)
Gibbon	MODERN SPECIES	18	CCN6 (ENSNLEG00000012965)	TUBE1 (ENSNLEG00000012976)	FAM229B (ENSNLEG00000012997)	LAMA4 (ENSNLEG00000013000)	MARCKS (ENSNLEG00000034431)	HDAC2 (ENSNLEG00000013058)	HS3ST5 (ENSNLEG00000013070)	FRK (ENSNLEG00000013075)	NT5DC1 (ENSNLEG00000013080)	COL10A1 (ENSNLEG00000013102)	TSPYL4 (ENSNLEG00000013105)	ENSNLEG00000018478	TSPYL1 (ENSNLEG00000019148)	DSE (ENSNLEG00000013106)	ENSNLEG00000032216	CALHM6 (ENSNLEG00000013120) ##20	TRAPPC3L (ENSNLEG00000013121)	CALHM5 (ENSNLEG00000013129) ##20	CALHM4 (ENSNLEG00000028191) ##20	RWDD1 (ENSNLEG00000013133)	RSPH4A (ENSNLEG00000013151)	ZUP1 (ENSNLEG00000013173)	KPNA5 (ENSNLEG00000013209)	ENSNLEG00000013253	ENSNLEG00000013257	RFX6 (ENSNLEG00000013258)	VGLL2 (ENSNLEG00000013293)	ROS1 (ENSNLEG00000013311)	DCBLD1 (ENSNLEG00000013410)	GOPC (ENSNLEG00000013426)	NUS1 (ENSNLEG00000029327)
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00960000190362.E.b	ENSGT00950000183105.A.m.a.r.j.a	ENSGT00390000012138.a.a.j.b	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Crab-eating macaque	MODERN SPECIES	14	FAM229B (ENSMFAG00000045226)	ENSMFAG00000056511	LAMA4 (ENSMFAG00000037073)	ENSMFAG00000064818	ENSMFAG00000031632	ENSMFAG00000018794	ENSMFAG00000052224	HDAC2 (ENSMFAG00000040542)	HS3ST5 (ENSMFAG00000061930)	ENSMFAG00000063529	ENSMFAG00000047737	FRK (ENSMFAG00000000665)	NT5DC1 (ENSMFAG00000038038)	COL10A1 (ENSMFAG00000038014)	DSE (ENSMFAG00000033289)	CALHM6 (ENSMFAG00000041853) ##20	TRAPPC3L (ENSMFAG00000055248)	CALHM5 (ENSMFAG00000052041) ##20	ENSMFAG00000033309 ##20	RWDD1 (ENSMFAG00000042598)	RSPH4A (ENSMFAG00000038872)	ZUP1 (ENSMFAG00000001086)	KPNA5 (ENSMFAG00000038991)	FAM162B (ENSMFAG00000050195)	GPRC6A (ENSMFAG00000037810)	RFX6 (ENSMFAG00000000913)	ENSMFAG00000039023	ROS1 (ENSMFAG00000001072)	DCBLD1 (ENSMFAG00000033065)	GOPC (ENSMFAG00000032714)	ENSMFAG00000063596
Pig-tailed macaque	MODERN SPECIES	342										FRK (ENSMNEG00000042618)	NT5DC1 (ENSMNEG00000029093)	COL10A1 (ENSMNEG00000021680)	TSPYL4 (ENSMNEG00000028445)	ENSMNEG00000031556	DSE (ENSMNEG00000028181)	CALHM6 (ENSMNEG00000044903) ##20	TRAPPC3L (ENSMNEG00000045331)	CALHM5 (ENSMNEG00000044741) ##20	CALHM4 (ENSMNEG00000029150) ##20	RWDD1 (ENSMNEG00000045094)	RSPH4A (ENSMNEG00000038377)	ZUP1 (ENSMNEG00000031978)	KPNA5 (ENSMNEG00000033544)	FAM162B (ENSMNEG00000032267)	GPRC6A (ENSMNEG00000035336)	RFX6 (ENSMNEG00000037412)	VGLL2 (ENSMNEG00000034485)	ROS1 (ENSMNEG00000044781)	DCBLD1 (ENSMNEG00000045089)	GOPC (ENSMNEG00000041231)	NUS1 (ENSMNEG00000013910)
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.r	ENSGT00940000162991	ENSGT00940000162821	ENSGT00860000136122	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Olive baboon	MODERN SPECIES	16	ENSPANG00000040680	ENSPANG00000049180	MARCKS (ENSPANG00000023060)	HDAC2 (ENSPANG00000004969)	HS3ST5 (ENSPANG00000020863)	ENSPANG00000039146	ENSPANG00000045691	FRK (ENSPANG00000015735)	COL10A1 (ENSPANG00000022055)	NT5DC1 (ENSPANG00000024103)	TSPYL4 (ENSPANG00000035333)	TSPYL1 (ENSPANG00000007994)	ENSPANG00000044294	DSE (ENSPANG00000000826)	ENSPANG00000044624	CALHM6 (ENSPANG00000038049) ##20	CALHM5 (ENSPANG00000006250) ##20	TRAPPC3L (ENSPANG00000024071)	CALHM4 (ENSPANG00000013290) ##20	RWDD1 (ENSPANG00000008148)	RSPH4A (ENSPANG00000006886)	ZUP1 (ENSPANG00000021725)	KPNA5 (ENSPANG00000008670)	FAM162B (ENSPANG00000022513)	GPRC6A (ENSPANG00000024072)	RFX6 (ENSPANG00000008240)	VGLL2 (ENSPANG00000016788)	ROS1 (ENSPANG00000022514)	ENSPANG00000049743	DCBLD1 (ENSPANG00000017288)	GOPC (ENSPANG00000020085)
Cercopithecinae_d	ANCESTRAL SPECIES	70	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00860000136122	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u
Sooty mangabey	MODERN SPECIES	590	TUBE1 (ENSCATG00000036781)	FAM229B (ENSCATG00000033467)	LAMA4 (ENSCATG00000035013)	ENSCATG00000002853	ENSCATG00000033527	ENSCATG00000023134	MARCKS (ENSCATG00000009912)	HDAC2 (ENSCATG00000042591)	HS3ST5 (ENSCATG00000028503)	FRK (ENSCATG00000039585)	NT5DC1 (ENSCATG00000021794)	COL10A1 (ENSCATG00000019945)	TSPYL4 (ENSCATG00000041203)	ENSCATG00000043899	DSE (ENSCATG00000039900)	CALHM6 (ENSCATG00000041474) ##20	TRAPPC3L (ENSCATG00000039208)	CALHM5 (ENSCATG00000013734) ##20	CALHM4 (ENSCATG00000022187) ##20	RWDD1 (ENSCATG00000030010)	RSPH4A (ENSCATG00000031193)	ZUP1 (ENSCATG00000042362)	KPNA5 (ENSCATG00000034707)	FAM162B (ENSCATG00000031733)	GPRC6A (ENSCATG00000038791)	RFX6 (ENSCATG00000034545)	VGLL2 (ENSCATG00000038510)	ROS1 (ENSCATG00000021312)	ENSCATG00000022159	DCBLD1 (ENSCATG00000033783)	GOPC (ENSCATG00000037476)
Drill	MODERN SPECIES	1413												NT5DC1 (ENSMLEG00000035573)	TSPYL4 (ENSMLEG00000036698)	ENSMLEG00000032841	DSE (ENSMLEG00000028071)	CALHM6 (ENSMLEG00000041324) ##20	TRAPPC3L (ENSMLEG00000028506)	CALHM5 (ENSMLEG00000035316) ##20	CALHM4 (ENSMLEG00000032140) ##20	RWDD1 (ENSMLEG00000011284)	RSPH4A (ENSMLEG00000000631)	ZUP1 (ENSMLEG00000033401)	KPNA5 (ENSMLEG00000041216)	FAM162B (ENSMLEG00000039589)	GPRC6A (ENSMLEG00000033168)	RFX6 (ENSMLEG00000033029)	ENSMLEG00000030294	ROS1 (ENSMLEG00000029082)	DCBLD1 (ENSMLEG00000040426)	GOPC (ENSMLEG00000026392)	NUS1 (ENSMLEG00000035527)
Vervet Monkey	MODERN SPECIES	4	TUBE1 (ENSCSAG00000015606)	FAM229B (ENSCSAG00000015632)	LAMA4 (ENSCSAG00000015643)	ENSCSAG00000015668	RFPL4B (ENSCSAG00000018974)	MARCKS (ENSCSAG00000015680)	HDAC2 (ENSCSAG00000015692)	HS3ST5 (ENSCSAG00000015695)	FRK (ENSCSAG00000015700)	COL10A1 (ENSCSAG00000015703)	ENSCSAG00000015707	NT5DC1 (ENSCSAG00000015718)	TSPYL4 (ENSCSAG00000018973)	TSPYL1 (ENSCSAG00000018972)	DSE (ENSCSAG00000015723)	CALHM6 (ENSCSAG00000015726) ##20	CALHM5 (ENSCSAG00000015732) ##20	TRAPPC3L (ENSCSAG00000015735)	CALHM4 (ENSCSAG00000015763) ##20	RWDD1 (ENSCSAG00000015772)	RSPH4A (ENSCSAG00000015777)	ZUP1 (ENSCSAG00000015785)	KPNA5 (ENSCSAG00000015794)	FAM162B (ENSCSAG00000015801)	GPRC6A (ENSCSAG00000015844)	RFX6 (ENSCSAG00000015856)	VGLL2 (ENSCSAG00000015869)	ROS1 (ENSCSAG00000015976)	DCBLD1 (ENSCSAG00000016039)	GOPC (ENSCSAG00000016048)	NUS1 (ENSCSAG00000016053)
Rhinopithecus	ANCESTRAL SPECIES	472																ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b
Golden snub-nosed monkey	MODERN SPECIES	1726														DSE (ENSRROG00000033698)	ENSRROG00000022531	CALHM6 (ENSRROG00000024470) ##20	TRAPPC3L (ENSRROG00000036813)	CALHM5 (ENSRROG00000028944) ##20	CALHM4 (ENSRROG00000030193) ##20	RWDD1 (ENSRROG00000034466)	RSPH4A (ENSRROG00000034483)	ZUP1 (ENSRROG00000001608)	KPNA5 (ENSRROG00000007638)	FAM162B (ENSRROG00000002813)	GPRC6A (ENSRROG00000029975)	RFX6 (ENSRROG00000042517)
Black snub-nosed monkey	MODERN SPECIES	1771														DSE (ENSRBIG00000035087)	ENSRBIG00000001662	CALHM6 (ENSRBIG00000007538) ##20	CALHM5 (ENSRBIG00000027627) ##20	TRAPPC3L (ENSRBIG00000028722)	CALHM4 (ENSRBIG00000032541) ##20	ENSRBIG00000023199	RSPH4A (ENSRBIG00000033414)	ZUP1 (ENSRBIG00000042607)	KPNA5 (ENSRBIG00000029401)	FAM162B (ENSRBIG00000032712)	GPRC6A (ENSRBIG00000029856)	RFX6 (ENSRBIG00000044389)
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00390000000970.b.n.a.b	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Marmoset	MODERN SPECIES	16	TUBE1 (ENSCJAG00000004829)	FAM229B (ENSCJAG00000086953)	LAMA4 (ENSCJAG00000004703)	ENSCJAG00000071609	ENSCJAG00000050876	MARCKS (ENSCJAG00000063272)	HDAC2 (ENSCJAG00000004635)	HS3ST5 (ENSCJAG00000086455)	ENSCJAG00000067023	FRK (ENSCJAG00000004595)	TSPYL4 (ENSCJAG00000034803)	ENSCJAG00000047367	COL10A1 (ENSCJAG00000004589)	TSPYL1 (ENSCJAG00000040079)	DSE (ENSCJAG00000004530)	CALHM6 (ENSCJAG00000004524) ##20	TRAPPC3L (ENSCJAG00000004513)	CALHM5 (ENSCJAG00000059277) ##20	CALHM4 (ENSCJAG00000004499) ##20	ENSCJAG00000004474	RSPH4A (ENSCJAG00000004455)	ZUP1 (ENSCJAG00000004437)	KPNA5 (ENSCJAG00000004394)	ENSCJAG00000072141	FAM162B (ENSCJAG00000055731)	GPRC6A (ENSCJAG00000004373)	RFX6 (ENSCJAG00000004349)	VGLL2 (ENSCJAG00000004345)	ROS1 (ENSCJAG00000004286)	ENSCJAG00000070188	ENSCJAG00000004257
Cebidae_a	ANCESTRAL SPECIES	26								ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000170327	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Capuchin	MODERN SPECIES	11										ENSCCAG00000001468	FRK (ENSCCAG00000025087)	COL10A1 (ENSCCAG00000032758)	NT5DC1 (ENSCCAG00000024638)	EIF3H (ENSCCAG00000033678)	DSE (ENSCCAG00000030876)	CALHM6 (ENSCCAG00000029008) ##20	CALHM5 (ENSCCAG00000021913) ##20	TRAPPC3L (ENSCCAG00000035786)	CALHM4 (ENSCCAG00000029702) ##20	RWDD1 (ENSCCAG00000027935)	RSPH4A (ENSCCAG00000007275)	ZUP1 (ENSCCAG00000025061)	KPNA5 (ENSCCAG00000022746)	FAM162B (ENSCCAG00000031118)	GPRC6A (ENSCCAG00000030003)	RFX6 (ENSCCAG00000019715)	VGLL2 (ENSCCAG00000028036)	ROS1 (ENSCCAG00000033956)	ENSCCAG00000027081	DCBLD1 (ENSCCAG00000025349)	ENSCCAG00000028924
Bolivian squirrel monkey	MODERN SPECIES	145				ENSSBOG00000027906	ENSSBOG00000027531	ENSSBOG00000036394	ENSSBOG00000026123	HS3ST5 (ENSSBOG00000025511)	ENSSBOG00000025026	FRK (ENSSBOG00000024353)	COL10A1 (ENSSBOG00000022558)	ENSSBOG00000022050	ENSSBOG00000020743	ENSSBOG00000020332	DSE (ENSSBOG00000019590)	CALHM6 (ENSSBOG00000018753) ##20	CALHM5 (ENSSBOG00000014712) ##20	TRAPPC3L (ENSSBOG00000010873)	CALHM4 (ENSSBOG00000006032) ##20	RWDD1 (ENSSBOG00000029590)	RSPH4A (ENSSBOG00000027685)	ZUP1 (ENSSBOG00000023075)	KPNA5 (ENSSBOG00000020656)	FAM162B (ENSSBOG00000013087)	GPRC6A (ENSSBOG00000034356)	ENSSBOG00000031250	RFX6 (ENSSBOG00000029327)	ENSSBOG00000027243	ROS1 (ENSSBOG00000026173)	DCBLD1 (ENSSBOG00000023384)	GOPC (ENSSBOG00000021757)
Mas night monkey	MODERN SPECIES	1107				ENSANAG00000018810	MARCKS (ENSANAG00000023603)	ENSANAG00000004036	HDAC2 (ENSANAG00000034693)	ENSANAG00000018971	HS3ST5 (ENSANAG00000026473)	FRK (ENSANAG00000035872)	COL10A1 (ENSANAG00000028479)	ENSANAG00000031391	TSPYL1 (ENSANAG00000022346)	ENSANAG00000036796	DSE (ENSANAG00000038310)	CALHM6 (ENSANAG00000032722) ##20	CALHM5 (ENSANAG00000001421) ##20	ENSANAG00000030183	TRAPPC3L (ENSANAG00000026394)	CALHM4 (ENSANAG00000022923) ##20	RWDD1 (ENSANAG00000030086)	RSPH4A (ENSANAG00000020519)	ZUP1 (ENSANAG00000021756)	KPNA5 (ENSANAG00000009920)	FAM162B (ENSANAG00000023673)	GPRC6A (ENSANAG00000028734)	ENSANAG00000020549	RFX6 (ENSANAG00000035610)	VGLL2 (ENSANAG00000033765)	ROS1 (ENSANAG00000029743)	DCBLD1 (ENSANAG00000036214)
Tarsier	MODERN SPECIES	3809												FRK (ENSTSYG00000006421)	ENSTSYG00000012714	COL10A1 (ENSTSYG00000035031)	DSE (ENSTSYG00000009566)	FAM26F (ENSTSYG00000036009) ##20	TRAPPC3L (ENSTSYG00000006716)	FAM26E (ENSTSYG00000006740) ##20	FAM26D (ENSTSYG00000006743) ##20	RWDD1 (ENSTSYG00000008636)
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Mouse lemur	MODERN SPECIES	28	ENSMICG00000008708	ENSMICG00000042685	FYN (ENSMICG00000008716)	CCN6 (ENSMICG00000008735)	TUBE1 (ENSMICG00000047219)	FAM229B (ENSMICG00000043291)	LAMA4 (ENSMICG00000008751)	MARCKS (ENSMICG00000026883)	HDAC2 (ENSMICG00000000261)	HS3ST5 (ENSMICG00000027940)	FRK (ENSMICG00000003603)	ENSMICG00000046212	NT5DC1 (ENSMICG00000003606)	TSPYL1 (ENSMICG00000044487)	DSE (ENSMICG00000008111)	CALHM6 (ENSMICG00000032074) ##20	CALHM5 (ENSMICG00000008119) ##20	TRAPPC3L (ENSMICG00000008115)	CALHM4 (ENSMICG00000008123) ##20	ENSMICG00000036368	ENSMICG00000032805	MMUT (ENSMICG00000008076)	CENPQ (ENSMICG00000042405)	GLYATL3 (ENSMICG00000002636)	ENSMICG00000046680	RHAG (ENSMICG00000008366)	CRISP2 (ENSMICG00000014964)	CRISP3 (ENSMICG00000002617)	CRISP1 (ENSMICG00000002786)	DEFB114 (ENSMICG00000044264)	DEFB113 (ENSMICG00000032756)
Lemuriformes_a	ANCESTRAL SPECIES	63	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Coquerels sifaka	MODERN SPECIES	445											FRK (ENSPCOG00000016754)	ENSPCOG00000017572	NT5DC1 (ENSPCOG00000019513)	TSPYL1 (ENSPCOG00000020616)	DSE (ENSPCOG00000017942)	CALHM6 (ENSPCOG00000015099) ##20	CALHM5 (ENSPCOG00000020027) ##20	TRAPPC3L (ENSPCOG00000018449)	CALHM4 (ENSPCOG00000027369) ##20	RSPH4A (ENSPCOG00000006824)	ZUP1 (ENSPCOG00000021558)	KPNA5 (ENSPCOG00000016943)	GPRC6A (ENSPCOG00000013226)	ENSPCOG00000024330	RFX6 (ENSPCOG00000024904)	VGLL2 (ENSPCOG00000017437)	ROS1 (ENSPCOG00000018293)	DCBLD1 (ENSPCOG00000023692)	GOPC (ENSPCOG00000028025)	ENSPCOG00000019234	NUS1 (ENSPCOG00000020589)
Greater bamboo lemur	MODERN SPECIES	117	TUBE1 (ENSPSMG00000025000)	FAM229B (ENSPSMG00000025004)	LAMA4 (ENSPSMG00000025055)	ENSPSMG00000025088	MARCKS (ENSPSMG00000025094)	ENSPSMG00000025097	HDAC2 (ENSPSMG00000025136)	HS3ST5 (ENSPSMG00000025147)	FRK (ENSPSMG00000025161)	NT5DC1 (ENSPSMG00000025168)	ENSPSMG00000025170	TSPYL4 (ENSPSMG00000025171)	ENSPSMG00000025176	ENSPSMG00000025178	DSE (ENSPSMG00000025197)	CALHM6 (ENSPSMG00000025201) ##20	TRAPPC3L (ENSPSMG00000025203)	CALHM5 (ENSPSMG00000025204) ##20	CALHM4 (ENSPSMG00000025205) ##20	RWDD1 (ENSPSMG00000025211)	ENSPSMG00000025216	ENSPSMG00000025223	RSPH4A (ENSPSMG00000025239)	ZUP1 (ENSPSMG00000025258)	KPNA5 (ENSPSMG00000025274)	FAM162B (ENSPSMG00000025283)	GPRC6A (ENSPSMG00000025285)	RFX6 (ENSPSMG00000025293)
Bushbaby	MODERN SPECIES	117	ENSOGAG00000033832	ENSOGAG00000011203	LAMA4 (ENSOGAG00000011205)	ENSOGAG00000031703	ENSOGAG00000025253	ENSOGAG00000028073	HDAC2 (ENSOGAG00000011016)	HS3ST5 (ENSOGAG00000011023)	FRK (ENSOGAG00000009140)	NT5DC1 (ENSOGAG00000009142)	COL10A1 (ENSOGAG00000024717)	TSPYL4 (ENSOGAG00000031495)	TSPYL1 (ENSOGAG00000001189)	ENSOGAG00000025070	DSE (ENSOGAG00000001191)	CALHM6 (ENSOGAG00000032372) ##20	TRAPPC3L (ENSOGAG00000014677)	CALHM5 (ENSOGAG00000014679) ##20	CALHM4 (ENSOGAG00000014682) ##20	RWDD1 (ENSOGAG00000014683)	ENSOGAG00000025916	ENSOGAG00000030595	RSPH4A (ENSOGAG00000011917)	ZUP1 (ENSOGAG00000011921)	KPNA5 (ENSOGAG00000011924)	FAM162B (ENSOGAG00000011931)	GPRC6A (ENSOGAG00000011933)	RFX6 (ENSOGAG00000011937)	VGLL2 (ENSOGAG00000031570)	ROS1 (ENSOGAG00000005027)	GOPC (ENSOGAG00000014241)
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Tree shrew	MODERN SPECIES	4335															DSE (ENSTBEG00000009310)	CALHM6 (ENSTBEG00000009471) ##20	TRAPPC3L (ENSTBEG00000001430)	CALHM5 (ENSTBEG00000001977) ##20	CALHM4 (ENSTBEG00000002287) ##20	RWDD1 (ENSTBEG00000002543)
Glires	ANCESTRAL SPECIES	5	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Rodentia	ANCESTRAL SPECIES	6	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT01050000247848	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Hystricomorpha	ANCESTRAL SPECIES	41	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Naked mole-rat female	MODERN SPECIES	30	BOK (ENSHGLG00000015101)	THAP4 (ENSHGLG00000015125)	ATG4B (ENSHGLG00000018630)	DTYMK (ENSHGLG00000018717)	ING5 (ENSHGLG00000037490)	D2HGDH (ENSHGLG00000003119)	GAL3ST2 (ENSHGLG00000003311)	NEU4 (ENSHGLG00000003691)	PDCD1 (ENSHGLG00000032677)	ENSHGLG00000004109	ENSHGLG00000038816	ENSHGLG00000000610	ENSHGLG00000041212	TSPYL4 (ENSHGLG00000036673)	DSE (ENSHGLG00000041966)	CALHM6 (ENSHGLG00000033792) ##20	TRAPPC3L (ENSHGLG00000002142)	CALHM5 (ENSHGLG00000035655) ##20	CALHM4 (ENSHGLG00000002679) ##20	ENSHGLG00000002331	ENSHGLG00000019728	ENSHGLG00000019671	ENSHGLG00000019674	ENSHGLG00000000164	ENSHGLG00000050432	ENSHGLG00000002101	ENSHGLG00000017890	ENSHGLG00000047673	ENSHGLG00000050169	ENSHGLG00000034017	CHAMP1 (ENSHGLG00000019874)
Hystricomorpha_a	ANCESTRAL SPECIES	46	ENSGT00940000156226	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Hystricomorpha_b	ANCESTRAL SPECIES	121						ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Degu	MODERN SPECIES	424													ENSODEG00000000400	COL10A1 (ENSODEG00000000467)	DSE (ENSODEG00000000261)	CALHM6 (ENSODEG00000000335) ##20
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT01050000247848	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w	ENSGT00940000156772.x	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Marmotini	ANCESTRAL SPECIES	11	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w	ENSGT00940000156772.x	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Alpin marmot	MODERN SPECIES	2	ENSMMMG00000014893	TRAF3IP2 (ENSMMMG00000014896)	FYN (ENSMMMG00000014912)	CCN6 (ENSMMMG00000015161)	TUBE1 (ENSMMMG00000015165)	FAM229B (ENSMMMG00000015179)	LAMA4 (ENSMMMG00000015194)	ENSMMMG00000015261	HDAC2 (ENSMMMG00000015264)	HS3ST5 (ENSMMMG00000015290)	FRK (ENSMMMG00000015306)	ENSMMMG00000015316	ENSMMMG00000015321	TSPYL4 (ENSMMMG00000015326)	DSE (ENSMMMG00000015341)	CALHM6 (ENSMMMG00000015349) ##20	CALHM5 (ENSMMMG00000015357) ##20	CALHM4 (ENSMMMG00000015364) ##20	RWDD1 (ENSMMMG00000015368)	ENSMMMG00000015375	ENSMMMG00000015383	ENSMMMG00000015402	RSPH4A (ENSMMMG00000015424)	ZUP1 (ENSMMMG00000015434)	KPNA5 (ENSMMMG00000015469)	FAM162B (ENSMMMG00000015589)	GPRC6A (ENSMMMG00000015597)	RFX6 (ENSMMMG00000015641)	VGLL2 (ENSMMMG00000015787)	ROS1 (ENSMMMG00000015799)	DCBLD1 (ENSMMMG00000015903)
Marmotini_b	ANCESTRAL SPECIES	230									ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w
Arctic ground squirrel	MODERN SPECIES	641											FRK (ENSUPAG00010000456)	ENSUPAG00010000440	NT5DC1 (ENSUPAG00010000422)	TSPYL4 (ENSUPAG00010000416)	DSE (ENSUPAG00010000398)	CALHM6 (ENSUPAG00010000391) ##20	CALHM5 (ENSUPAG00010000386) ##20	TRAPPC3L (ENSUPAG00010000373)	CALHM4 (ENSUPAG00010000356) ##20	RWDD1 (ENSUPAG00010000317)	ENSUPAG00010000296
Squirrel	MODERN SPECIES	424										FRK (ENSSTOG00000010404)	NT5DC1 (ENSSTOG00000008916)	COL10A1 (ENSSTOG00000008935)	TSPYL4 (ENSSTOG00000008940)	TSPYL1 (ENSSTOG00000028666)	DSE (ENSSTOG00000013912)	CALHM6 (ENSSTOG00000006731) ##20	TRAPPC3L (ENSSTOG00000032320)	CALHM5 (ENSSTOG00000006744) ##20	CALHM4 (ENSSTOG00000001157) ##20	RWDD1 (ENSSTOG00000020231)
Eurasian red squirrel	MODERN SPECIES	16	LAMA4 (ENSSVLG00005010349)	ENSSVLG00005010294	MARCKS (ENSSVLG00005010232)	ENSSVLG00005010204	HDAC2 (ENSSVLG00005010140)	ENSSVLG00005010101	HS3ST5 (ENSSVLG00005010072)	ENSSVLG00005010037	ENSSVLG00005010009	FRK (ENSSVLG00005009937)	COL10A1 (ENSSVLG00005009901)	NT5DC1 (ENSSVLG00005009872)	TSPYL4 (ENSSVLG00005009852)	TSPYL1 (ENSSVLG00005009835)	DSE (ENSSVLG00005009768)	CALHM6 (ENSSVLG00005009719) ##20	CALHM5 (ENSSVLG00005009693) ##20	TRAPPC3L (ENSSVLG00005009643)	CALHM4 (ENSSVLG00005009602) ##20	ENSSVLG00005009556	ENSSVLG00005009507	RSPH4A (ENSSVLG00005009389)	ZUP1 (ENSSVLG00005009321)	KPNA5 (ENSSVLG00005009288)	FAM162B (ENSSVLG00005009241)	GPRC6A (ENSSVLG00005009132)	RFX6 (ENSSVLG00005008988)	VGLL2 (ENSSVLG00005008910)	ROS1 (ENSSVLG00005008411)	GOPC (ENSSVLG00005008267)	ENSSVLG00005008200
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Kangaroo rat	MODERN SPECIES	476	ENSDORG00000006922	Rev3l (ENSDORG00000000703)	ENSDORG00000010688	Fyn (ENSDORG00000016706)	Ccn6 (ENSDORG00000012026)	ENSDORG00000012029	Fam229b (ENSDORG00000012031)	Lama4 (ENSDORG00000012032)	Hdac2 (ENSDORG00000013317)	Hs3st5 (ENSDORG00000028438)	Frk (ENSDORG00000000702)	ENSDORG00000010312	Nt5dc1 (ENSDORG00000010307)	Tspyl4 (ENSDORG00000027297)	Dse (ENSDORG00000012764)	Calhm6 (ENSDORG00000012765) ##20	Calhm5 (ENSDORG00000012771) ##20	Trappc3l (ENSDORG00000012769)	Calhm4 (ENSDORG00000012772) ##20	Rwdd1 (ENSDORG00000012373)	ENSDORG00000025806	Rsph4a (ENSDORG00000003944)	Zup1 (ENSDORG00000003947)	ENSDORG00000015949	Fam162b (ENSDORG00000024159)	Gprc6a (ENSDORG00000013585)	Rfx6 (ENSDORG00000013591)	Vgll2 (ENSDORG00000016343)	Ros1 (ENSDORG00000007167)	Dcbld1 (ENSDORG00000015776)	Gopc (ENSDORG00000015778)
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Muroidea	ANCESTRAL SPECIES	22	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Northern American deer mouse	MODERN SPECIES	7	Fyn (ENSPEMG00000019599)	Ccn6 (ENSPEMG00000019642)	Tube1 (ENSPEMG00000019866)	Fam229b (ENSPEMG00000029065)	Lama4 (ENSPEMG00000019628)	ENSPEMG00000014821	Hdac2 (ENSPEMG00000019358)	Hs3st5 (ENSPEMG00000027903)	ENSPEMG00000027759	Frk (ENSPEMG00000027385)	Nt5dc1 (ENSPEMG00000020069)	Col10a1 (ENSPEMG00000019392)	Tspyl4 (ENSPEMG00000031222)	Tspyl1 (ENSPEMG00000019621)	Dse (ENSPEMG00000019781)	Calhm6 (ENSPEMG00000019812) ##20	Trappc3l (ENSPEMG00000019941)	Calhm5 (ENSPEMG00000019478) ##20	Calhm4 (ENSPEMG00000017719) ##20	Rwdd1 (ENSPEMG00000000119)	ENSPEMG00000010482	Rsph4a (ENSPEMG00000015392)	Zup1 (ENSPEMG00000019963)	ENSPEMG00000021071	Fam162b (ENSPEMG00000022270)	Gprc6a (ENSPEMG00000021921)	Rfx6 (ENSPEMG00000013570)	ENSPEMG00000028021	Vgll2 (ENSPEMG00000011624)	Ros1 (ENSPEMG00000018962)	Dcbld1 (ENSPEMG00000023463)
Prairie vole	MODERN SPECIES	358	Ccn6 (ENSMOCG00000014379)	Tube1 (ENSMOCG00000012627)	Fam229b (ENSMOCG00000011348)	Lama4 (ENSMOCG00000007325)	ENSMOCG00000014007	Marcks (ENSMOCG00000011957)	ENSMOCG00000007938	Hs3st5 (ENSMOCG00000006907)	ENSMOCG00000021869	Frk (ENSMOCG00000011544)	ENSMOCG00000018965	Nt5dc1 (ENSMOCG00000011487)	Tspyl4 (ENSMOCG00000006852)	Tspyl1 (ENSMOCG00000007884)	Dse (ENSMOCG00000021598)	Calhm6 (ENSMOCG00000017769) ##20	Calhm5 (ENSMOCG00000011633) ##20	Trappc3l (ENSMOCG00000011302)	Calhm4 (ENSMOCG00000004418) ##20	ENSMOCG00000002869	ENSMOCG00000021945	Grik2 (ENSMOCG00000022205)	Ascc3 (ENSMOCG00000004549)	Sim1 (ENSMOCG00000017754)	ENSMOCG00000008070	Ppp1r14c (ENSMOCG00000002551)	Iyd (ENSMOCG00000012475)	Plekhg1 (ENSMOCG00000006027)	Mthfd1l (ENSMOCG00000011918)	ENSMOCG00000019373	Zbtb2 (ENSMOCG00000018175)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Golden Hamster	MODERN SPECIES	655	Fyn (ENSMAUG00000008178)	Ccn6 (ENSMAUG00000021485)	Tube1 (ENSMAUG00000008915)	Fam229b (ENSMAUG00000019053)	Lama4 (ENSMAUG00000008791)	Marcks (ENSMAUG00000014455)	ENSMAUG00000006781	Hdac2 (ENSMAUG00000020410)	Hs3st5 (ENSMAUG00000011520)	Frk (ENSMAUG00000011561)	Nt5dc1 (ENSMAUG00000018298)	Col10a1 (ENSMAUG00000021181)	Tspyl4 (ENSMAUG00000007306)	Tspyl1 (ENSMAUG00000018330)	Dse (ENSMAUG00000020240)	Calhm6 (ENSMAUG00000002308) ##20	Trappc3l (ENSMAUG00000004214)	Calhm5 (ENSMAUG00000014804) ##20	Calhm4 (ENSMAUG00000020546) ##20	Rwdd1 (ENSMAUG00000001504)	ENSMAUG00000009333	Rsph4a (ENSMAUG00000009247)	Zup1 (ENSMAUG00000012807)	ENSMAUG00000009856	Fam162b (ENSMAUG00000012733)	Rfx6 (ENSMAUG00000002997)	ENSMAUG00000007444	Vgll2 (ENSMAUG00000019922)	Ros1 (ENSMAUG00000016942)	Dcbld1 (ENSMAUG00000010738)	Gopc (ENSMAUG00000007546)
Chinese hamster chok1gshd	MODERN SPECIES	160	ENSCGRG00001014335	Ccn6 (ENSCGRG00001011722)	Tube1 (ENSCGRG00001012631)	Fam229b (ENSCGRG00001012149)	Lama4 (ENSCGRG00001023009)	Marcks (ENSCGRG00001020371)	Hdac2 (ENSCGRG00001016612)	Hs3st5 (ENSCGRG00001015101)	ENSCGRG00001014662	Frk (ENSCGRG00001012098)	Col10a1 (ENSCGRG00001011438)	Nt5dc1 (ENSCGRG00001019057)	Tspyl4 (ENSCGRG00001015452)	Tspyl1 (ENSCGRG00001016055)	Dse (ENSCGRG00001016755)	Calhm6 (ENSCGRG00001016166) ##20	Calhm5 (ENSCGRG00001015860) ##20	Trappc3l (ENSCGRG00001001357)	Calhm4 (ENSCGRG00001000585) ##20	Rwdd1 (ENSCGRG00001000262)	ENSCGRG00001022958	ENSCGRG00001022688	Rsph4a (ENSCGRG00001022255)	Zup1 (ENSCGRG00001019649)	ENSCGRG00001017023	Fam162b (ENSCGRG00001013690)	Gprc6a (ENSCGRG00001019351)	Rfx6 (ENSCGRG00001013519)	ENSCGRG00001016423	Vgll2 (ENSCGRG00001012605)	ENSCGRG00001008034
Murinae	ANCESTRAL SPECIES	36	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000003880.b.b
Mus	ANCESTRAL SPECIES	15	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000156772.`b	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636
Mouse	MODERN SPECIES	1	Ccn6 (ENSMUSG00000062074)	Tube1 (ENSMUSG00000019845)	Fam229b (ENSMUSG00000051736)	Lama4 (ENSMUSG00000019846)	Rfpl4b (ENSMUSG00000094311)	Marcks (ENSMUSG00000069662)	Hdac2 (ENSMUSG00000019777)	Hs3st5 (ENSMUSG00000044499)	Amd2 (ENSMUSG00000063953)	Frk (ENSMUSG00000019779)	Col10a1 (ENSMUSG00000039462)	Tspyl4 (ENSMUSG00000039485)	Nt5dc1 (ENSMUSG00000039480)	Tspyl1 (ENSMUSG00000047514)	Dse (ENSMUSG00000039497)	Calhm6 (ENSMUSG00000046031) ##20	Calhm5 (ENSMUSG00000049872) ##20	Calhm4 (ENSMUSG00000039508) ##20	Trappc3l (ENSMUSG00000071340)	Rwdd1 (ENSMUSG00000019782)	Zup1 (ENSMUSG00000039531)	Rsph4a (ENSMUSG00000039552)	Sult3a1 (ENSMUSG00000069668)	Sult3a2 (ENSMUSG00000090298)	Clvs2 (ENSMUSG00000019785)	Trdn (ENSMUSG00000019787)	Nkain2 (ENSMUSG00000069670)	Rnf217 (ENSMUSG00000063760)	Tpd52l1 (ENSMUSG00000000296)	Hddc2 (ENSMUSG00000000295)	Hey2 (ENSMUSG00000019789)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000003880.b.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000156772.`b	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636
spretus	MODERN SPECIES	1	Fyn (MGP_SPRETEiJ_G0016055)	Ccn6 (MGP_SPRETEiJ_G0016054)	Tube1 (MGP_SPRETEiJ_G0016053)	Fam229b (MGP_SPRETEiJ_G0016052)	Lama4 (MGP_SPRETEiJ_G0016051)	Rfpl4b (MGP_SPRETEiJ_G0016050)	Marcks (MGP_SPRETEiJ_G0016049)	Hdac2 (MGP_SPRETEiJ_G0016048)	Hs3st5 (MGP_SPRETEiJ_G0016047)	Frk (MGP_SPRETEiJ_G0016046)	Col10a1 (MGP_SPRETEiJ_G0016045)	Nt5dc1 (MGP_SPRETEiJ_G0016044)	Tspyl4 (MGP_SPRETEiJ_G0016043)	Tspyl1 (MGP_SPRETEiJ_G0016042)	Dse (MGP_SPRETEiJ_G0016041)	Calhm6 (MGP_SPRETEiJ_G0016040) ##20	Calhm5 (MGP_SPRETEiJ_G0016039) ##20	Calhm4 (MGP_SPRETEiJ_G0016038) ##20	Trappc3l (MGP_SPRETEiJ_G0016037)	Rwdd1 (MGP_SPRETEiJ_G0016036)	MGP_SPRETEiJ_G0016035	Zup1 (MGP_SPRETEiJ_G0016034)	Rsph4a (MGP_SPRETEiJ_G0016033)	Sult3a1 (MGP_SPRETEiJ_G0016032)	MGP_SPRETEiJ_G0016031	Clvs2 (MGP_SPRETEiJ_G0016030)	Trdn (MGP_SPRETEiJ_G0016029)	Nkain2 (MGP_SPRETEiJ_G0016028)	Rnf217 (MGP_SPRETEiJ_G0016027)	Tpd52l1 (MGP_SPRETEiJ_G0016026)	Hddc2 (MGP_SPRETEiJ_G0016025)
Steppe mouse	MODERN SPECIES	2637										Frk (ENSMSIG00000029824)	Col10a1 (ENSMSIG00000029818)	Nt5dc1 (ENSMSIG00000029807)	Tspyl4 (ENSMSIG00000029805)	Tspyl1 (ENSMSIG00000029804)	Dse (ENSMSIG00000029795)	Calhm6 (ENSMSIG00000029790) ##20	Calhm5 (ENSMSIG00000029788) ##20	Trappc3l (ENSMSIG00000029785)	Calhm4 (ENSMSIG00000029784) ##20	ENSMSIG00000029781
Ryukyu mouse	MODERN SPECIES	1	Fyn (MGP_CAROLIEiJ_G0015246)	Ccn6 (MGP_CAROLIEiJ_G0015245)	Tube1 (MGP_CAROLIEiJ_G0015244)	Fam229b (MGP_CAROLIEiJ_G0015243)	Lama4 (MGP_CAROLIEiJ_G0015242)	Rfpl4b (MGP_CAROLIEiJ_G0015241)	Marcks (MGP_CAROLIEiJ_G0015240)	Hdac2 (MGP_CAROLIEiJ_G0015239)	Hs3st5 (MGP_CAROLIEiJ_G0015238)	Frk (MGP_CAROLIEiJ_G0015237)	Col10a1 (MGP_CAROLIEiJ_G0015236)	Tspyl4 (MGP_CAROLIEiJ_G0015235)	Nt5dc1 (MGP_CAROLIEiJ_G0015234)	Tspyl1 (MGP_CAROLIEiJ_G0015233)	Dse (MGP_CAROLIEiJ_G0015232)	Calhm6 (MGP_CAROLIEiJ_G0015231) ##20	Calhm5 (MGP_CAROLIEiJ_G0015230) ##20	Calhm4 (MGP_CAROLIEiJ_G0015229) ##20	Trappc3l (MGP_CAROLIEiJ_G0015228)	Rwdd1 (MGP_CAROLIEiJ_G0015227)	MGP_CAROLIEiJ_G0015226	Zup1 (MGP_CAROLIEiJ_G0015225)	Rsph4a (MGP_CAROLIEiJ_G0015224)	MGP_CAROLIEiJ_G0015223	Sult3a1 (MGP_CAROLIEiJ_G0015222)	Clvs2 (MGP_CAROLIEiJ_G0015221)	Trdn (MGP_CAROLIEiJ_G0015220)	Nkain2 (MGP_CAROLIEiJ_G0015219)	Rnf217 (MGP_CAROLIEiJ_G0015218)	Tpd52l1 (MGP_CAROLIEiJ_G0015217)	Hddc2 (MGP_CAROLIEiJ_G0015216)
Shrew mouse	MODERN SPECIES	22	Fyn (MGP_PahariEiJ_G0030663)	Ccn6 (MGP_PahariEiJ_G0030662)	Tube1 (MGP_PahariEiJ_G0030661)	Fam229b (MGP_PahariEiJ_G0030660)	Lama4 (MGP_PahariEiJ_G0030659)	Rfpl4b (MGP_PahariEiJ_G0030658)	Marcks (MGP_PahariEiJ_G0030657)	Hdac2 (MGP_PahariEiJ_G0030656)	Hs3st5 (MGP_PahariEiJ_G0030655)	Frk (MGP_PahariEiJ_G0030654)	Col10a1 (MGP_PahariEiJ_G0030653)	Tspyl4 (MGP_PahariEiJ_G0030652)	Nt5dc1 (MGP_PahariEiJ_G0030651)	Tspyl1 (MGP_PahariEiJ_G0030650)	Dse (MGP_PahariEiJ_G0030649)	MGP_PahariEiJ_G0030648 ##20	Calhm5 (MGP_PahariEiJ_G0030647) ##20	Calhm4 (MGP_PahariEiJ_G0030646) ##20	Trappc3l (MGP_PahariEiJ_G0030645)	Rwdd1 (MGP_PahariEiJ_G0030644)	MGP_PahariEiJ_G0030643	Zup1 (MGP_PahariEiJ_G0030642)	Rsph4a (MGP_PahariEiJ_G0030641)	MGP_PahariEiJ_G0030640
Rat	MODERN SPECIES	12	Pla2g12b (ENSRNOG00000046619)	P4ha1 (ENSRNOG00000050655)	Snrpd2l (ENSRNOG00000048758)	Sowahc (ENSRNOG00000064749)	Septin10 (ENSRNOG00000049507)	ENSRNOG00000068135	Sh3rf3 (ENSRNOG00000046791)	Edar (ENSRNOG00000028598)	Ccdc138 (ENSRNOG00000028581)	ENSRNOG00000064170	Ranbp2 (ENSRNOG00000000796)	Lims1 (ENSRNOG00000037765)	Gcc2 (ENSRNOG00000000823)	ENSRNOG00000069923	Dse (ENSRNOG00000000824)	Calhm6 (ENSRNOG00000037757) ##20	Calhm5 (ENSRNOG00000000825) ##20	Calhm4 (ENSRNOG00000000580) ##20	Trappc3l (ENSRNOG00000031290)	Rwdd1 (ENSRNOG00000042916)	Tet1 (ENSRNOG00000000277)	LOC103694416 (ENSRNOG00000051063)	Dna2 (ENSRNOG00000000387)	Rufy2 (ENSRNOG00000065563)	Hnrnph3 (ENSRNOG00000048193)	Ak6 (ENSRNOG00000026813)	Pbld2 (ENSRNOG00000069854)	Pbld1 (ENSRNOG00000000386)	Atoh7 (ENSRNOG00000000384)	Mypn (ENSRNOG00000000383)	Herc4 (ENSRNOG00000061040)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1622										Frk (ENSNGAG00000023884)	ENSNGAG00000019635	Nt5dc1 (ENSNGAG00000017414)	Tspyl4 (ENSNGAG00000013340)	Tspyl1 (ENSNGAG00000002957)	Dse (ENSNGAG00000023284)	Calhm6 (ENSNGAG00000022608) ##20	Calhm5 (ENSNGAG00000021647) ##20	Trappc3l (ENSNGAG00000020430)	Calhm4 (ENSNGAG00000011668) ##20	ENSNGAG00000022138	ENSNGAG00000021507	ENSNGAG00000023845	ENSNGAG00000023286	Rsph4a (ENSNGAG00000022773)	Zup1 (ENSNGAG00000020874)
Lagomorpha	ANCESTRAL SPECIES	108					ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT01050000244950.a.a.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Rabbit	MODERN SPECIES	3	HDAC2 (ENSOCUG00000000598)	ENSOCUG00000036084	HS3ST5 (ENSOCUG00000002744)	ENSOCUG00000024678	ENSOCUG00000031905	ENSOCUG00000032491	ENSOCUG00000037887	FRK (ENSOCUG00000001181)	NT5DC1 (ENSOCUG00000001184)	ENSOCUG00000001188	ENSOCUG00000022880	TSPYL4 (ENSOCUG00000016118)	ENSOCUG00000015797	ENSOCUG00000032572	DSE (ENSOCUG00000007344)	CALHM6 (ENSOCUG00000029266) ##20	ENSOCUG00000030465	ENSOCUG00000035395	ENSOCUG00000032983	TRAPPC3L (ENSOCUG00000002656)	CALHM5 (ENSOCUG00000002660) ##20	CALHM4 (ENSOCUG00000025315) ##20	ENSOCUG00000013592	SULT3A1 (ENSOCUG00000021060)	ENSOCUG00000022763	ENSOCUG00000021703	KPNA5 (ENSOCUG00000007812)	RSPH4A (ENSOCUG00000009852)	ZUP1 (ENSOCUG00000007805)	ENSOCUG00000037695	FAM162B (ENSOCUG00000022415)
Pika	MODERN SPECIES	3259															DSE (ENSOPRG00000005682)	CALHM6 (ENSOPRG00000005695) ##20	TRAPPC3L (ENSOPRG00000005702)	CALHM5 (ENSOPRG00000005717) ##20	RWDD1 (ENSOPRG00000005722)
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00990000213455	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Eulipotyphla	DUPLICATION
Eulipotyphla	ANCESTRAL SPECIES	774																ENSGT01030000234610.a.a.u ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20
Common shrew	MODERN SPECIES	6274																ENSSARG00000004410 ##20	TRAPPC3L (ENSSARG00000004434)	CALHM5 (ENSSARG00000004449) ##20
Hedgehog	MODERN SPECIES	10329																CALHM6 (ENSEEUG00000006796) ##20
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234610.a.a.v ##20
Common shrew	DUPLICATION
Common shrew	MODERN SPECIES	8702																ENSSARG00000003802 ##20
Common shrew	MODERN SPECIES	8674																ENSSARG00000001673 ##20
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Suina	ANCESTRAL SPECIES	18	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000013639	ENSGT00940000161538	ENSGT00950000183068.b	ENSGT00390000000155.b	ENSGT00950000183134.c.a.b	ENSGT00390000007224.a	ENSGT00390000000509	ENSGT00390000016421.b.b	ENSGT00390000003986	ENSGT00940000154868.a.a	ENSGT00940000156277	ENSGT00940000157191
Chacoan peccary	MODERN SPECIES	61	TUBE1 (ENSCWAG00000008369)	FAM229B (ENSCWAG00000008405)	LAMA4 (ENSCWAG00000008444)	MARCKS (ENSCWAG00000008550)	ENSCWAG00000008580	HDAC2 (ENSCWAG00000008651)	HS3ST5 (ENSCWAG00000008713)	FRK (ENSCWAG00000008748)	NT5DC1 (ENSCWAG00000008856)	COL10A1 (ENSCWAG00000008896)	ENSCWAG00000008941	ENSCWAG00000008967	TSPYL4 (ENSCWAG00000009011)	TSPYL1 (ENSCWAG00000009025)	DSE (ENSCWAG00000009050)	CALHM6 (ENSCWAG00000009128) ##20	TRAPPC3L (ENSCWAG00000009152)	CALHM5 (ENSCWAG00000009224) ##20	CALHM4 (ENSCWAG00000009259) ##20	RWDD1 (ENSCWAG00000009319)	LGSN (ENSCWAG00000009373)	ENSCWAG00000009512	SNAP91 (ENSCWAG00000009617)	PRSS35 (ENSCWAG00000010881)	ME1 (ENSCWAG00000010897)	RWDD2A (ENSCWAG00000010932)	PGM3 (ENSCWAG00000010966)	DOP1A (ENSCWAG00000011136)	UBE3D (ENSCWAG00000011379)	TPBG (ENSCWAG00000012210)	IBTK (ENSCWAG00000012235)
Pig	MODERN SPECIES		LAMA4 (ENSSSCG00000004425)	ENSSSCG00000062211	RFPL4B (ENSSSCG00000050324)	ENSSSCG00000043946	ENSSSCG00000047473	MARCKS (ENSSSCG00000037803)	HDAC2 (ENSSSCG00000004432)	HS3ST5 (ENSSSCG00000004433)	ENSSSCG00000042456	FRK (ENSSSCG00000004434)	NT5DC1 (ENSSSCG00000004435)	COL10A1 (ENSSSCG00000004436)	TSPYL4 (ENSSSCG00000047800)	TSPYL1 (ENSSSCG00000004438)	DSE (ENSSSCG00000004441)	CALHM6 (ENSSSCG00000036064) ##20	TRAPPC3L (ENSSSCG00000040660)	CALHM5 (ENSSSCG00000031898) ##20	CALHM4 (ENSSSCG00000004445) ##20	ENSSSCG00000004446	ENSSSCG00000025656	ENSSSCG00000023415	ENSSSCG00000043963	ENSSSCG00000040797	LGSN (ENSSSCG00000004450)	RIPPLY2 (ENSSSCG00000062898)	SNAP91 (ENSSSCG00000004453)	PRSS35 (ENSSSCG00000004452)	ME1 (ENSSSCG00000004454)	RWDD2A (ENSSSCG00000029129)	PGM3 (ENSSSCG00000004456)
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000155723	ENSGT00390000017996.b.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT00940000163194	ENSGT00730000111419	ENSGT00390000010526	ENSGT00940000155725.c.a	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725.c.a	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Monodontidae	ANCESTRAL SPECIES	18	ENSGT00390000017996.b.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725.c.a	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.fb.a
Beluga whale	MODERN SPECIES	80	ENSDLEG00000008624	LAMA4 (ENSDLEG00000008657)	ENSDLEG00000008750	MARCKS (ENSDLEG00000008765)	ENSDLEG00000008805	ENSDLEG00000008835	HS3ST5 (ENSDLEG00000008858)	FRK (ENSDLEG00000008878)	NT5DC1 (ENSDLEG00000008913)	COL10A1 (ENSDLEG00000008950)	ENSDLEG00000008963	ENSDLEG00000008984	TSPYL4 (ENSDLEG00000009007)	TSPYL1 (ENSDLEG00000009017)	DSE (ENSDLEG00000009031)	CALHM6 (ENSDLEG00000009051) ##20	TRAPPC3L (ENSDLEG00000009065)	CALHM5 (ENSDLEG00000009096) ##20	RWDD1 (ENSDLEG00000009107)	ENSDLEG00000009142	RSPH4A (ENSDLEG00000009231)	ZUFSP (ENSDLEG00000009259)	KPNA5 (ENSDLEG00000009304)	ENSDLEG00000009360	RFX6 (ENSDLEG00000009399)	VGLL2 (ENSDLEG00000009573)	ROS1 (ENSDLEG00000009633)	DCBLD1 (ENSDLEG00000010188)	GOPC (ENSDLEG00000010264)	ENSDLEG00000010330	ENSDLEG00000010342
Narwhal	MODERN SPECIES	301	ENSMMNG00015005185	LAMA4 (ENSMMNG00015005201)	RFPL4B (ENSMMNG00015005237)	MARCKS (ENSMMNG00015005242)	ENSMMNG00015005256	ENSMMNG00015005291	HS3ST5 (ENSMMNG00015005299)	FRK (ENSMMNG00015005316)	NT5DC1 (ENSMMNG00015005330)	ENSMMNG00015005344	COL10A1 (ENSMMNG00015005355)	ENSMMNG00015005366	TSPYL4 (ENSMMNG00015005368)	TSPYL1 (ENSMMNG00015005374)	DSE (ENSMMNG00015005398)	CALHM6 (ENSMMNG00015005416) ##20	ENSMMNG00015005423	CALHM5 (ENSMMNG00015005431) ##20	RWDD1 (ENSMMNG00015005444)	ENSMMNG00015005470	RSPH4A (ENSMMNG00015005528)	ZUP1 (ENSMMNG00015005586)	KPNA5 (ENSMMNG00015005622)	ENSMMNG00015005645	RFX6 (ENSMMNG00015005664)	VGLL2 (ENSMMNG00015005717)	ROS1 (ENSMMNG00015005760)	DCBLD1 (ENSMMNG00015005797)	GOPC (ENSMMNG00015005841)	ENSMMNG00015005868	NUS1 (ENSMMNG00015005877)
Vaquita	MODERN SPECIES	3	CCN6 (ENSPSNG00000008779)	TUBE1 (ENSPSNG00000008724)	ENSPSNG00000008695	LAMA4 (ENSPSNG00000008592)	RFPL4B (ENSPSNG00000008570)	MARCKS (ENSPSNG00000008534)	ENSPSNG00000008494	HS3ST5 (ENSPSNG00000008454)	ENSPSNG00000008427	FRK (ENSPSNG00000008357)	COL10A1 (ENSPSNG00000008333)	NT5DC1 (ENSPSNG00000008301)	TSPYL4 (ENSPSNG00000008269)	TSPYL1 (ENSPSNG00000008248)	DSE (ENSPSNG00000015522)	CALHM6 (ENSPSNG00000015458) ##20	ENSPSNG00000015417	CALHM5 (ENSPSNG00000015370) ##20	RWDD1 (ENSPSNG00000015291)	ENSPSNG00000015188	ENSPSNG00000015114	RSPH4A (ENSPSNG00000014807)	ZUP1 (ENSPSNG00000014675)	KPNA5 (ENSPSNG00000014587)	ENSPSNG00000014478	RFX6 (ENSPSNG00000014229)	VGLL2 (ENSPSNG00000014117)	ROS1 (ENSPSNG00000012984)	ENSPSNG00000012888	DCBLD1 (ENSPSNG00000012812)	GOPC (ENSPSNG00000012679)
Dolphin	MODERN SPECIES	3432															DSE (ENSTTRG00000016545)	ENSTTRG00000016546 ##20	ENSTTRG00000016547	CALHM5 (ENSTTRG00000016548) ##20	RWDD1 (ENSTTRG00000016549)
Sperm whale	MODERN SPECIES	1	TUBE1 (ENSPCTG00005015173)	FAM229B (ENSPCTG00005015125)	LAMA4 (ENSPCTG00005014812)	RFPL4B (ENSPCTG00005014764)	MARCKS (ENSPCTG00005014735)	HDAC2 (ENSPCTG00005014660)	ENSPCTG00005014592	HS3ST5 (ENSPCTG00005014555)	ENSPCTG00005014516	FRK (ENSPCTG00005014412)	COL10A1 (ENSPCTG00005014373)	NT5DC1 (ENSPCTG00005014318)	TSPYL4 (ENSPCTG00005014296)	TSPYL1 (ENSPCTG00005014244)	DSE (ENSPCTG00005014130)	CALHM6 (ENSPCTG00005014068) ##20	ENSPCTG00005014023	CALHM5 (ENSPCTG00005013991) ##20	CALHM4 (ENSPCTG00005013957) ##20	RWDD1 (ENSPCTG00005013868)	ENSPCTG00005013836	RSPH4A (ENSPCTG00005013636)	ZUP1 (ENSPCTG00005013556)	KPNA5 (ENSPCTG00005013498)	ENSPCTG00005013476	ENSPCTG00005013422	GPRC6A (ENSPCTG00005013287)	RFX6 (ENSPCTG00005013021)	VGLL2 (ENSPCTG00005012958)	ROS1 (ENSPCTG00005012163)	DCBLD1 (ENSPCTG00005011969)
Blue whale	MODERN SPECIES	3	FYN (ENSBMSG00010013133)	CCN6 (ENSBMSG00010013102)	TUBE1 (ENSBMSG00010013084)	ENSBMSG00010013077	LAMA4 (ENSBMSG00010013059)	RFPL4B (ENSBMSG00010013050)	MARCKS (ENSBMSG00010013045)	ENSBMSG00010013029	HS3ST5 (ENSBMSG00010013020)	FRK (ENSBMSG00010013005)	COL10A1 (ENSBMSG00010012998)	NT5DC1 (ENSBMSG00010012985)	TSPYL4 (ENSBMSG00010012977)	TSPYL1 (ENSBMSG00010012974)	DSE (ENSBMSG00010012963)	CALHM6 (ENSBMSG00010012947) ##20	ENSBMSG00010012945	CALHM5 (ENSBMSG00010012937) ##20	RWDD1 (ENSBMSG00010012927)	ENSBMSG00010012918	RSPH4A (ENSBMSG00010012884)	ZUP1 (ENSBMSG00010012859)	KPNA5 (ENSBMSG00010012836)	ENSBMSG00010012825	FAM162B (ENSBMSG00010012817)	RFX6 (ENSBMSG00010012789)	VGLL2 (ENSBMSG00010012771)	ROS1 (ENSBMSG00010012625)	DCBLD1 (ENSBMSG00010012558)	GOPC (ENSBMSG00010012533)	ENSBMSG00010012507
Pecora	ANCESTRAL SPECIES	19	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Percora_a	ANCESTRAL SPECIES	21	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00390000009168.v.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Siberian musk deer	MODERN SPECIES	55			MARCKS (ENSMMSG00000004987)	ENSMMSG00000004892	HS3ST5 (ENSMMSG00000004861)	ENSMMSG00000004852	ENSMMSG00000004842	ENSMMSG00000004817	ENSMMSG00000004714	FRK (ENSMMSG00000004640)	COL10A1 (ENSMMSG00000004611)	NT5DC1 (ENSMMSG00000004536)	TSPYL4 (ENSMMSG00000004521)	TSPYL1 (ENSMMSG00000004513)	DSE (ENSMMSG00000004477)	CALHM6 (ENSMMSG00000004443) ##20	CALHM5 (ENSMMSG00000004430) ##20	TRAPPC3L (ENSMMSG00000004425)	CALHM4 (ENSMMSG00000004408) ##20	ENSMMSG00000004377	ENSMMSG00000004355	ENSMMSG00000004337	RSPH4A (ENSMMSG00000004275)	ZUP1 (ENSMMSG00000004239)	KPNA5 (ENSMMSG00000004217)	FAM162B (ENSMMSG00000004205)	RFX6 (ENSMMSG00000004143)	VGLL2 (ENSMMSG00000004130)	ROS1 (ENSMMSG00000003965)	DCBLD1 (ENSMMSG00000003913)	GOPC (ENSMMSG00000003874)
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Caprinae	ANCESTRAL SPECIES	33	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.a.b	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Goat	DUPLICATION
Goat	MODERN SPECIES	28	REV3L (ENSCHIG00000023002)	TRAF3IP2 (ENSCHIG00000019593)	FYN (ENSCHIG00000009044)	CCN6 (ENSCHIG00000025400)	TUBE1 (ENSCHIG00000020635)	FAM229B (ENSCHIG00000018398)	LAMA4 (ENSCHIG00000019560)	MARCKS (ENSCHIG00000009392)	HDAC2 (ENSCHIG00000024213)	HS3ST5 (ENSCHIG00000019513)	FRK (ENSCHIG00000006701)	COL10A1 (ENSCHIG00000008425)	NT5DC1 (ENSCHIG00000025209)	TSPYL1 (ENSCHIG00000013019)	DSE (ENSCHIG00000010064)	ENSCHIG00000025860 ##20	ENSCHIG00000022717 ##20	CALHM5 (ENSCHIG00000018702) ##20	TRAPPC3L (ENSCHIG00000021481)	CALHM4 (ENSCHIG00000006125) ##20	ENSCHIG00000020636	ENSCHIG00000014681	RSPH4A (ENSCHIG00000022737)	ZUP1 (ENSCHIG00000022998)	FAM162B (ENSCHIG00000013451)	KPNA5 (ENSCHIG00000025297)	RFX6 (ENSCHIG00000021570)	VGLL2 (ENSCHIG00000014445)	ROS1 (ENSCHIG00000016323)	ENSCHIG00000010524	GOPC (ENSCHIG00000017940)
Goat	MODERN SPECIES	28	TRAF3IP2 (ENSCHIG00000019593)	FYN (ENSCHIG00000009044)	CCN6 (ENSCHIG00000025400)	TUBE1 (ENSCHIG00000020635)	FAM229B (ENSCHIG00000018398)	LAMA4 (ENSCHIG00000019560)	MARCKS (ENSCHIG00000009392)	HDAC2 (ENSCHIG00000024213)	HS3ST5 (ENSCHIG00000019513)	FRK (ENSCHIG00000006701)	COL10A1 (ENSCHIG00000008425)	NT5DC1 (ENSCHIG00000025209)	TSPYL1 (ENSCHIG00000013019)	DSE (ENSCHIG00000010064)	ENSCHIG00000025860 ##20	ENSCHIG00000022717 ##20	CALHM5 (ENSCHIG00000018702) ##20	TRAPPC3L (ENSCHIG00000021481)	CALHM4 (ENSCHIG00000006125) ##20	ENSCHIG00000020636	ENSCHIG00000014681	RSPH4A (ENSCHIG00000022737)	ZUP1 (ENSCHIG00000022998)	FAM162B (ENSCHIG00000013451)	KPNA5 (ENSCHIG00000025297)	RFX6 (ENSCHIG00000021570)	VGLL2 (ENSCHIG00000014445)	ROS1 (ENSCHIG00000016323)	ENSCHIG00000010524	GOPC (ENSCHIG00000017940)	ENSCHIG00000018408
Bovinae	ANCESTRAL SPECIES	31	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
American bison	MODERN SPECIES	3332	CFAP20 (ENSBBBG00000009492)	CSNK2A2 (ENSBBBG00000009499)	CCDC113 (ENSBBBG00000001521)	ENSBBBG00000009506	GINS3 (ENSBBBG00000009512)	NDRG4 (ENSBBBG00000009621)	SETD6 (ENSBBBG00000009667)	CNOT1 (ENSBBBG00000009711)	SLC38A7 (ENSBBBG00000009730)	GOT2 (ENSBBBG00000009736)	COL10A1 (ENSBBBG00000009745)	NT5DC1 (ENSBBBG00000009754)	TSPYL4 (ENSBBBG00000009756)	ENSBBBG00000009757	DSE (ENSBBBG00000009038)	ENSBBBG00000009766 ##20	CALHM5 (ENSBBBG00000001616) ##20	TRAPPC3L (ENSBBBG00000009772)	CALHM4 (ENSBBBG00000009776) ##20	ENSBBBG00000009781	RSPH4A (ENSBBBG00000009798)	ZUP1 (ENSBBBG00000009809)	KPNA5 (ENSBBBG00000009821)	FAM162B (ENSBBBG00000009824)	RFX6 (ENSBBBG00000009832)	VGLL2 (ENSBBBG00000009836)	ROS1 (ENSBBBG00000009903)	DCBLD1 (ENSBBBG00000001665)	GOPC (ENSBBBG00000009979)	ENSBBBG00000009991	NUS1 (ENSBBBG00000009996)
Bos	ANCESTRAL SPECIES	19	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Bos_b	ANCESTRAL SPECIES	24	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723.c	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.r	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Hybrid Bos Indicus	MODERN SPECIES	28	ENSBIXG00005009470	ENSBIXG00005009508	FAM229B (ENSBIXG00005009541)	LAMA4 (ENSBIXG00005009675)	ENSBIXG00005009782	MARCKS (ENSBIXG00005005803)	ENSBIXG00005009805	HDAC2 (ENSBIXG00005005946)	HS3ST5 (ENSBIXG00005000647)	FRK (ENSBIXG00005009902)	COL10A1 (ENSBIXG00005009915)	NT5DC1 (ENSBIXG00005009924)	TSPYL4 (ENSBIXG00005009942)	ENSBIXG00005009950	DSE (ENSBIXG00005009989)	CALHM6 (ENSBIXG00005010017) ##20	CALHM5 (ENSBIXG00005000765) ##20	TRAPPC3L (ENSBIXG00005010050)	CALHM4 (ENSBIXG00005010065) ##20	ENSBIXG00005006416	ENSBIXG00005010118	ENSBIXG00005010142	RSPH4A (ENSBIXG00005010221)	ZUP1 (ENSBIXG00005010258)	KPNA5 (ENSBIXG00005000829)	FAM162B (ENSBIXG00005010298)	RFX6 (ENSBIXG00005010323)	VGLL2 (ENSBIXG00005010356)	ROS1 (ENSBIXG00005010381)	DCBLD1 (ENSBIXG00005000746)	GOPC (ENSBIXG00005010544)
Cow	MODERN SPECIES	28	FYN (ENSBTAG00000011851)	CCN6 (ENSBTAG00000017205)	TUBE1 (ENSBTAG00000013837)	FAM229B (ENSBTAG00000033429)	LAMA4 (ENSBTAG00000008817)	MARCKS (ENSBTAG00000002082)	HDAC2 (ENSBTAG00000011849)	ENSBTAG00000049305	HS3ST5 (ENSBTAG00000000188)	FRK (ENSBTAG00000020018)	COL10A1 (ENSBTAG00000003078)	NT5DC1 (ENSBTAG00000003076)	TSPYL4 (ENSBTAG00000009127)	TSPYL1 (ENSBTAG00000010885)	DSE (ENSBTAG00000005205)	CALHM6 (ENSBTAG00000006549) ##20	CALHM5 (ENSBTAG00000045879) ##20	TRAPPC3L (ENSBTAG00000033554)	CALHM4 (ENSBTAG00000033535) ##20	RWDD1 (ENSBTAG00000009689)	SULT1C4 (ENSBTAG00000026672)	ENSBTAG00000050815	RSPH4A (ENSBTAG00000011890)	ZUP1 (ENSBTAG00000003878)	KPNA5 (ENSBTAG00000026673)	FAM162B (ENSBTAG00000033460)	RFX6 (ENSBTAG00000000264)	VGLL2 (ENSBTAG00000046282)	ROS1 (ENSBTAG00000047600)	DCBLD1 (ENSBTAG00000047338)	GOPC (ENSBTAG00000016046)
Bos_a	ANCESTRAL SPECIES	18	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Wild yak	MODERN SPECIES	2090										FRK (ENSBMUG00000004546)	COL10A1 (ENSBMUG00000004529)	NT5DC1 (ENSBMUG00000004517)	TSPYL4 (ENSBMUG00000004509)	ENSBMUG00000004500	DSE (ENSBMUG00000004486)	ENSBMUG00000004450 ##20
Domestic yak	MODERN SPECIES	1	TUBE1 (ENSBGRG00000012582)	FAM229B (ENSBGRG00000012646)	LAMA4 (ENSBGRG00000012696)	ENSBGRG00000013479	ENSBGRG00000013503	ENSBGRG00000013525	MARCKS (ENSBGRG00000013546)	HDAC2 (ENSBGRG00000013629)	HS3ST5 (ENSBGRG00000013854)	FRK (ENSBGRG00000005311)	NT5DC1 (ENSBGRG00000005373)	COL10A1 (ENSBGRG00000005476)	TSPYL4 (ENSBGRG00000005502)	ENSBGRG00000005510	DSE (ENSBGRG00000005532)	CALHM6 (ENSBGRG00000005600) ##20	TRAPPC3L (ENSBGRG00000005625)	CALHM5 (ENSBGRG00000005669) ##20	CALHM4 (ENSBGRG00000005714) ##20	RWDD1 (ENSBGRG00000005754)	ENSBGRG00000005844	RSPH4A (ENSBGRG00000005878)	ZUP1 (ENSBGRG00000005961)	KPNA5 (ENSBGRG00000006026)	FAM162B (ENSBGRG00000006132)	RFX6 (ENSBGRG00000006177)	VGLL2 (ENSBGRG00000006319)	ROS1 (ENSBGRG00000006479)	ENSBGRG00000006843	ENSBGRG00000006862	DCBLD1 (ENSBGRG00000006916)
Yarkand deer	MODERN SPECIES	20	FYN (ENSCHYG00000024400)	CCN6 (ENSCHYG00000024312)	TUBE1 (ENSCHYG00000024271)	FAM229B (ENSCHYG00000024251)	LAMA4 (ENSCHYG00000023891)	MARCKS (ENSCHYG00000023854)	ENSCHYG00000023836	ENSCHYG00000023650	HS3ST5 (ENSCHYG00000023609)	FRK (ENSCHYG00000023541)	COL10A1 (ENSCHYG00000023514)	NT5DC1 (ENSCHYG00000023450)	TSPYL4 (ENSCHYG00000023428)	ENSCHYG00000023415	ENSCHYG00000023336	CALHM6 (ENSCHYG00000023311) ##20	CALHM5 (ENSCHYG00000023274) ##20	TRAPPC3L (ENSCHYG00000023206)	CALHM4 (ENSCHYG00000023149) ##20	ENSCHYG00000023080	ENSCHYG00000023038	RSPH4A (ENSCHYG00000022831)	ZUP1 (ENSCHYG00000022708)	KPNA5 (ENSCHYG00000022607)	FAM162B (ENSCHYG00000022579)	RFX6 (ENSCHYG00000022453)	ENSCHYG00000022426	ROS1 (ENSCHYG00000021945)	DCBLD1 (ENSCHYG00000021744)	GOPC (ENSCHYG00000021189)	ENSCHYG00000021123
Camelidae	ANCESTRAL SPECIES	26	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Alpaca	MODERN SPECIES	2547																ENSVPAG00000002185 ##20	TRAPPC3L (ENSVPAG00000002186)	CALHM5 (ENSVPAG00000002187) ##20	CALHM4 (ENSVPAG00000002188) ##20	RWDD1 (ENSVPAG00000002189)	RSPH4A (ENSVPAG00000002191)	ZUP1 (ENSVPAG00000002192)	KPNA5 (ENSVPAG00000002193)	FAM162B (ENSVPAG00000002195)	GPRC6A (ENSVPAG00000002197)	RFX6 (ENSVPAG00000002198)	DCBLD1 (ENSVPAG00000002199)	GOPC (ENSVPAG00000002203)	NUS1 (ENSVPAG00000002205)
Arabian camel	MODERN SPECIES	34	TUBE1 (ENSCDRG00005003362)	FAM229B (ENSCDRG00005003348)	LAMA4 (ENSCDRG00005003254)	ENSCDRG00005003222	MARCKS (ENSCDRG00005003193)	ENSCDRG00005003186	HDAC2 (ENSCDRG00005003171)	HS3ST5 (ENSCDRG00005003162)	FRK (ENSCDRG00005003143)	ENSCDRG00005003130	COL10A1 (ENSCDRG00005003121)	NT5DC1 (ENSCDRG00005003104)	TSPYL4 (ENSCDRG00005003098)	TSPYL1 (ENSCDRG00005003092)	DSE (ENSCDRG00005003068)	CALHM6 (ENSCDRG00005003016) ##20	CALHM5 (ENSCDRG00005003006) ##20	TRAPPC3L (ENSCDRG00005002989)	CALHM4 (ENSCDRG00005002979) ##20	RWDD1 (ENSCDRG00005002965)	ENSCDRG00005002955	RSPH4A (ENSCDRG00005002922)	ZUP1 (ENSCDRG00005002876)	KPNA5 (ENSCDRG00005002825)	FAM162B (ENSCDRG00005002796)	GPRC6A (ENSCDRG00005002744)	RFX6 (ENSCDRG00005002698)	ENSCDRG00005002682	ROS1 (ENSCDRG00005002608)	DCBLD1 (ENSCDRG00005002557)	GOPC (ENSCDRG00005002474)
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Equus	ANCESTRAL SPECIES	29	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.o	ENSGT00940000156772.p.a	ENSGT00940000156772.p.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831
Horse	MODERN SPECIES	1	CCN6 (ENSECAG00000013347)	TUBE1 (ENSECAG00000013843)	LAMA4 (ENSECAG00000018584)	RFPL4B (ENSECAG00000041082)	MARCKS (ENSECAG00000003398)	ENSECAG00000055511	HDAC2 (ENSECAG00000013577)	HS3ST5 (ENSECAG00000018033)	FRK (ENSECAG00000018039)	NT5DC1 (ENSECAG00000019833)	COL10A1 (ENSECAG00000020826)	TSPYL1 (ENSECAG00000003736)	TSPYL4 (ENSECAG00000030611)	ENSECAG00000031694	DSE (ENSECAG00000020975)	ENSECAG00000021708 ##20	ENSECAG00000051818	TRAPPC3L (ENSECAG00000021978)	CALHM5 (ENSECAG00000023268) ##20	CALHM4 (ENSECAG00000000714) ##20	RWDD1 (ENSECAG00000006587)	ENSECAG00000051393	ENSECAG00000010770	ENSECAG00000044333	RSPH4A (ENSECAG00000012533)	ZUP1 (ENSECAG00000013523)	KPNA5 (ENSECAG00000014734)	FAM162B (ENSECAG00000019150)	GPRC6A (ENSECAG00000019182)	RFX6 (ENSECAG00000019804)	ROS1 (ENSECAG00000023669)
Donkey	MODERN SPECIES	16	CCN6 (ENSEASG00005008053)	TUBE1 (ENSEASG00005008069)	FAM229B (ENSEASG00005028359)	LAMA4 (ENSEASG00005008172)	RFPL4B (ENSEASG00005038508)	MARCKS (ENSEASG00005008354)	HDAC2 (ENSEASG00005008358)	ENSEASG00005029672	HS3ST5 (ENSEASG00005033931)	FRK (ENSEASG00005008367)	NT5DC1 (ENSEASG00005008369)	COL10A1 (ENSEASG00005008370)	TSPYL4 (ENSEASG00005008371)	TSPYL1 (ENSEASG00005032253)	DSE (ENSEASG00005008373)	ENSEASG00005008375 ##20	TRAPPC3L (ENSEASG00005029591)	CALHM5 (ENSEASG00005008378) ##20	CALHM4 (ENSEASG00005008379) ##20	RWDD1 (ENSEASG00005008380)	ENSEASG00005008382	ENSEASG00005031003	ENSEASG00005028545	ENSEASG00005009048	RSPH4A (ENSEASG00005009050)	ZUP1 (ENSEASG00005009054)	KPNA5 (ENSEASG00005009059)	FAM162B (ENSEASG00005034252)	GPRC6A (ENSEASG00005009064)	RFX6 (ENSEASG00005009070)	ENSEASG00005037022
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Megabat	MODERN SPECIES	6986															DSE (ENSPVAG00000001002)	CALHM6 (ENSPVAG00000001004) ##20
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Microbat	MODERN SPECIES	994	PCMT1 (ENSMLUG00000002385)	NUP43 (ENSMLUG00000002078)	LATS1 (ENSMLUG00000002070)	KATNA1 (ENSMLUG00000002062)	GINM1 (ENSMLUG00000002059)	PPIL4 (ENSMLUG00000002766)	ZC3H12D (ENSMLUG00000029238)	TAB2 (ENSMLUG00000005344)	ENSMLUG00000023007	UST (ENSMLUG00000005127)	ENSMLUG00000008313	COL10A1 (ENSMLUG00000008338)	TSPYL4 (ENSMLUG00000015727)	TSPYL1 (ENSMLUG00000008370)	DSE (ENSMLUG00000002926)	CALHM6 (ENSMLUG00000002931) ##20	TRAPPC3L (ENSMLUG00000002941)	CALHM5 (ENSMLUG00000029405) ##20	CALHM4 (ENSMLUG00000011357) ##20	RWDD1 (ENSMLUG00000030427)	ENSMLUG00000024652	ENSMLUG00000028869	ENSMLUG00000030160	ENSMLUG00000029713	RSPH4A (ENSMLUG00000015892)	ZUP1 (ENSMLUG00000015906)	KPNA5 (ENSMLUG00000010070)	FAM162B (ENSMLUG00000010100)	GPRC6A (ENSMLUG00000010115)	RFX6 (ENSMLUG00000006665)	VGLL2 (ENSMLUG00000022632)
Greater horseshoe bat	MODERN SPECIES	21	ENSRFEG00010016261	FYN (ENSRFEG00010016290)	CCN6 (ENSRFEG00010016469)	TUBE1 (ENSRFEG00010016655)	FAM229B (ENSRFEG00010016724)	LAMA4 (ENSRFEG00010016795)	RFPL4B (ENSRFEG00010016880)	MARCKS (ENSRFEG00010016931)	HDAC2 (ENSRFEG00010016988)	HS3ST5 (ENSRFEG00010017069)	ENSRFEG00010017121	FRK (ENSRFEG00010017139)	NT5DC1 (ENSRFEG00010017166)	COL10A1 (ENSRFEG00010017207)	DSE (ENSRFEG00010017346)	CALHM6 (ENSRFEG00010017443) ##20	TRAPPC3L (ENSRFEG00010017466)	CALHM5 (ENSRFEG00010017554) ##20	CALHM4 (ENSRFEG00010017600) ##20	ENSRFEG00010017650	ENSRFEG00010017720	ENSRFEG00010017788	ENSRFEG00010017801	RSPH4A (ENSRFEG00010017838)	ZUP1 (ENSRFEG00010018008)	KPNA5 (ENSRFEG00010018178)	FAM162B (ENSRFEG00010018217)	RFX6 (ENSRFEG00010018276)	VGLL2 (ENSRFEG00010018446)	ROS1 (ENSRFEG00010018524)	ENSRFEG00010018893
Carnivora	ANCESTRAL SPECIES	4	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Felidae	ANCESTRAL SPECIES	5	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Panthera	ANCESTRAL SPECIES	7	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Tiger	MODERN SPECIES	120	FYN (ENSPTIG00000019895)	ENSPTIG00000006415	CCN6 (ENSPTIG00000019399)	TUBE1 (ENSPTIG00000019262)	FAM229B (ENSPTIG00000019248)	LAMA4 (ENSPTIG00000017802)	RFPL4B (ENSPTIG00000006386)	ENSPTIG00000006376	HDAC2 (ENSPTIG00000017437)	HS3ST5 (ENSPTIG00000017379)	FRK (ENSPTIG00000017241)	COL10A1 (ENSPTIG00000016999)	NT5DC1 (ENSPTIG00000016386)	TSPYL4 (ENSPTIG00000006365)	DSE (ENSPTIG00000015410)	ENSPTIG00000015377 ##20	CALHM5 (ENSPTIG00000015346) ##20	TRAPPC3L (ENSPTIG00000015246)	CALHM4 (ENSPTIG00000015112) ##20	RWDD1 (ENSPTIG00000014973)	ENSPTIG00000014688	ENSPTIG00000014529	RSPH4A (ENSPTIG00000014297)	ZUP1 (ENSPTIG00000013533)	KPNA5 (ENSPTIG00000013503)	FAM162B (ENSPTIG00000013420)	GPRC6A (ENSPTIG00000013115)	RFX6 (ENSPTIG00000012468)	ENSPTIG00000012308	ROS1 (ENSPTIG00000011449)	DCBLD1 (ENSPTIG00000011183)
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
leopard	MODERN SPECIES	246												NT5DC1 (ENSPPRG00000022632)	COL10A1 (ENSPPRG00000022643)	TSPYL4 (ENSPPRG00000011586)	DSE (ENSPPRG00000022657)	ENSPPRG00000022667 ##20	TRAPPC3L (ENSPPRG00000022673)	CALHM5 (ENSPPRG00000022680) ##20	CALHM4 (ENSPPRG00000022718) ##20	RWDD1 (ENSPPRG00000022725)	ENSPPRG00000022751
lion	MODERN SPECIES	5	TUBE1 (ENSPLOG00000003122)	FAM229B (ENSPLOG00000003138)	LAMA4 (ENSPLOG00000003185)	ENSPLOG00000003271	MARCKS (ENSPLOG00000003280)	ENSPLOG00000003352	HDAC2 (ENSPLOG00000003360)	HS3ST5 (ENSPLOG00000003442)	FRK (ENSPLOG00000003455)	NT5DC1 (ENSPLOG00000003475)	ENSPLOG00000003489	COL10A1 (ENSPLOG00000003502)	TSPYL4 (ENSPLOG00000003518)	ENSPLOG00000003526	DSE (ENSPLOG00000003558)	CALHM6 (ENSPLOG00000003580) ##20	TRAPPC3L (ENSPLOG00000003593)	CALHM5 (ENSPLOG00000003609) ##20	CALHM4 (ENSPLOG00000003619) ##20	RWDD1 (ENSPLOG00000003637)	ENSPLOG00000003653	RSPH4A (ENSPLOG00000003687)	ZUP1 (ENSPLOG00000003730)	KPNA5 (ENSPLOG00000003759)	FAM162B (ENSPLOG00000003773)	GPRC6A (ENSPLOG00000003804)	RFX6 (ENSPLOG00000003852)	VGLL2 (ENSPLOG00000010770)	ROS1 (ENSPLOG00000011040)	DCBLD1 (ENSPLOG00000011135)	GOPC (ENSPLOG00000011210)
Cat	MODERN SPECIES	236	TRAF3IP2 (ENSFCAG00000000667)	FYN (ENSFCAG00000023350)	CCN6 (ENSFCAG00000006305)	TUBE1 (ENSFCAG00000026151)	FAM229B (ENSFCAG00000030116)	LAMA4 (ENSFCAG00000006308)	MARCKS (ENSFCAG00000042952)	ENSFCAG00000051478	HDAC2 (ENSFCAG00000018836)	HS3ST5 (ENSFCAG00000000523)	FRK (ENSFCAG00000004043)	NT5DC1 (ENSFCAG00000013415)	COL10A1 (ENSFCAG00000040804)	TSPYL4 (ENSFCAG00000013418)	DSE (ENSFCAG00000023622)	ENSFCAG00000029592 ##20	TRAPPC3L (ENSFCAG00000021987)	CALHM5 (ENSFCAG00000033745) ##20	CALHM4 (ENSFCAG00000040211) ##20	RWDD1 (ENSFCAG00000025905)	ENSFCAG00000034736	ENSFCAG00000047240	ENSFCAG00000052457	RSPH4A (ENSFCAG00000027641)	ZUP1 (ENSFCAG00000031494)	KPNA5 (ENSFCAG00000023588)	FAM162B (ENSFCAG00000037427)	GPRC6A (ENSFCAG00000044183)	RFX6 (ENSFCAG00000018903)	VGLL2 (ENSFCAG00000043286)	ROS1 (ENSFCAG00000006448)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Canidae	ANCESTRAL SPECIES	34	ENSGT00390000007441	ENSGT01030000234667.b	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00940000162787	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017.ib	ENSGT00390000012017.hb	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Canis_lupus	ANCESTRAL SPECIES		ENSGT01030000234667.b	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00950000185354	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00940000162787	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017.ib	ENSGT00390000012017.hb	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Dog	MODERN SPECIES		GPR31 (ENSCAFG00845004842)	ENSCAFG00845004845	ENSCAFG00845004856	ENSCAFG00845004865	ENSCAFG00845004871	UNC93A (ENSCAFG00845004882)	ENSCAFG00845004891	ENSCAFG00845004971	ENSCAFG00845005088	FRMD1 (ENSCAFG00845005116)	DACT2 (ENSCAFG00845005143)	SMOC2 (ENSCAFG00845005168)	THBS2 (ENSCAFG00845005227)	ENSCAFG00845005366	DSE (ENSCAFG00845005500)	CALHM6 (ENSCAFG00845005516) ##20	TRAPPC3L (ENSCAFG00845005532)	CALHM5 (ENSCAFG00845005557) ##20	CALHM4 (ENSCAFG00845005573) ##20	RWDD1 (ENSCAFG00845005610)	ENSCAFG00845005641	RSPH4A (ENSCAFG00845005676)	ZUP1 (ENSCAFG00845005699)	KPNA5 (ENSCAFG00845005742)	FAM162B (ENSCAFG00845005779)	GPRC6A (ENSCAFG00845005820)	RFX6 (ENSCAFG00845005871)	VGLL2 (ENSCAFG00845005929)	ROS1 (ENSCAFG00845006019)	DCBLD1 (ENSCAFG00845006335)	GOPC (ENSCAFG00845006479)
Dingo	MODERN SPECIES	125	ENSCAFG00020019344	CEP43 (ENSCAFG00020019346)	ENSCAFG00020019351	CCR6 (ENSCAFG00020019355)	GPR31 (ENSCAFG00020019357)	ENSCAFG00020019364	TTLL2 (ENSCAFG00020019369)	UNC93A (ENSCAFG00020019373)	AFDN (ENSCAFG00020019469)	KIF25 (ENSCAFG00020021134)	DACT2 (ENSCAFG00020021138)	SMOC2 (ENSCAFG00020021152)	THBS2 (ENSCAFG00020021212)	WDR27 (ENSCAFG00020021252)	DSE (ENSCAFG00020021286)	CALHM6 (ENSCAFG00020021288) ##20	TRAPPC3L (ENSCAFG00020021289)	CALHM5 (ENSCAFG00020021296) ##20	ENSCAFG00020021302	RWDD1 (ENSCAFG00020021303)	ENSCAFG00020021310	ENSCAFG00020021315	RSPH4A (ENSCAFG00020021320)	ZUP1 (ENSCAFG00020021322)	KPNA5 (ENSCAFG00020021324)	FAM162B (ENSCAFG00020021355)	GPRC6A (ENSCAFG00020021358)	RFX6 (ENSCAFG00020021362)	VGLL2 (ENSCAFG00020021376)	ROS1 (ENSCAFG00020021389)	DCBLD1 (ENSCAFG00020021412)
Red fox	MODERN SPECIES	40												ENSVVUG00000016767	ENSVVUG00000016751	ENSVVUG00000016732	DSE (ENSVVUG00000016723)	CALHM6 (ENSVVUG00000016722) ##20	ENSVVUG00000016721	CALHM5 (ENSVVUG00000016720) ##20	CALHM4 (ENSVVUG00000016718) ##20	TRAPPC3L (ENSVVUG00000016711)	ENSVVUG00000016707	ENSVVUG00000016705	RSPH4A (ENSVVUG00000016700)	ZUP1 (ENSVVUG00000016696)	KPNA5 (ENSVVUG00000016678)	FAM162B (ENSVVUG00000016671)	GPRC6A (ENSVVUG00000016663)	RFX6 (ENSVVUG00000016613)	ENSVVUG00000016599	VGLL2 (ENSVVUG00000016593)	ROS1 (ENSVVUG00000015982)
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Ursidae	ANCESTRAL SPECIES	22	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Giant Panda	MODERN SPECIES	1	CCN6 (ENSAMEG00000016733)	TUBE1 (ENSAMEG00000016737)	FAM229B (ENSAMEG00000027978)	LAMA4 (ENSAMEG00000016747)	RFPL4B (ENSAMEG00000019194)	ENSAMEG00000031393	ENSAMEG00000025271	HDAC2 (ENSAMEG00000013147)	HS3ST5 (ENSAMEG00000013224)	FRK (ENSAMEG00000013338)	NT5DC1 (ENSAMEG00000005670)	COL10A1 (ENSAMEG00000013356)	TSPYL4 (ENSAMEG00000019723)	TSPYL1 (ENSAMEG00000005672)	DSE (ENSAMEG00000005674)	CALHM6 (ENSAMEG00000005679) ##20	TRAPPC3L (ENSAMEG00000005682)	CALHM5 (ENSAMEG00000005685) ##20	CALHM4 (ENSAMEG00000005689) ##20	RWDD1 (ENSAMEG00000005692)	ENSAMEG00000005716	ENSAMEG00000005725	ENSAMEG00000023971	RSPH4A (ENSAMEG00000005736)	ZUP1 (ENSAMEG00000005752)	KPNA5 (ENSAMEG00000005775)	FAM162B (ENSAMEG00000005819)	GPRC6A (ENSAMEG00000005823)	RFX6 (ENSAMEG00000005843)	ENSAMEG00000005850	ROS1 (ENSAMEG00000005851)
Ursus	ANCESTRAL SPECIES	45													ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Polar bear	MODERN SPECIES	172									FRK (ENSUMAG00000004055)	ENSUMAG00000004050	COL10A1 (ENSUMAG00000004046)	NT5DC1 (ENSUMAG00000003847)	TSPYL4 (ENSUMAG00000003828)	TSPYL1 (ENSUMAG00000003820)	DSE (ENSUMAG00000003818)	ENSUMAG00000003807 ##20	CALHM5 (ENSUMAG00000003806) ##20	TRAPPC3L (ENSUMAG00000003801)	CALHM4 (ENSUMAG00000003797) ##20	RWDD1 (ENSUMAG00000003790)	ENSUMAG00000003779	ENSUMAG00000003759	ZUP1 (ENSUMAG00000003755)	KPNA5 (ENSUMAG00000003152)	FAM162B (ENSUMAG00000003081)	GPRC6A (ENSUMAG00000003068)	RFX6 (ENSUMAG00000003019)	ENSUMAG00000003008	ROS1 (ENSUMAG00000002961)	ENSUMAG00000002944	DCBLD1 (ENSUMAG00000002929)
Anura	ANCESTRAL SPECIES	8	ENSGT00940000157966	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Frog	MODERN SPECIES	5	tube1 (ENSXETG00000011177)	ENSXETG00000049076	lama4 (ENSXETG00000007336)	marcks (ENSXETG00000027751)	hdac2 (ENSXETG00000007339)	hs3st5 (ENSXETG00000020230)	ENSXETG00000048366	ENSXETG00000042926	ENSXETG00000043493	ENSXETG00000044597	cfap206 (ENSXETG00000006172)	frk (ENSXETG00000006166)	col10a1 (ENSXETG00000033031)	nt5dc1 (ENSXETG00000034706)	dse (ENSXETG00000032776)	calhm6 (ENSXETG00000033644) ##20	calhm5 (ENSXETG00000044076) ##20	trappc3l (ENSXETG00000031870)	calhm4 (ENSXETG00000030384) ##20	birc7 (ENSXETG00000015707)	rwdd1 (ENSXETG00000014077)	XB5843062 [provisional:sult3a1] (ENSXETG00000030056)	zup1 (ENSXETG00000014074)	ENSXETG00000046674	fam162b (ENSXETG00000036478)	XB991396 [provisional:gprc6a] (ENSXETG00000032107)	gprc6a (ENSXETG00000032935)	ENSXETG00000049478	rfx6 (ENSXETG00000033810)	vgll2 (ENSXETG00000014041)	ros1 (ENSXETG00000037537)
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000017409	ENSLLEG00000017379	MARCKS (ENSLLEG00000017344)	ENSLLEG00000017300	ENSLLEG00000017275	HDAC2 (ENSLLEG00000016537)	ENSLLEG00000016423	HS3ST5 (ENSLLEG00000016380)	ENSLLEG00000016355	ENSLLEG00000016334	ENSLLEG00000016271	FRK (ENSLLEG00000016095)	ENSLLEG00000016041	NT5DC1 (ENSLLEG00000015951)	DSE (ENSLLEG00000015907)	CALHM6 (ENSLLEG00000015877) ##20	CALHM5 (ENSLLEG00000015832) ##20	TRAPPC3L (ENSLLEG00000015749)	CALHM4 (ENSLLEG00000015712) ##20	RWDD1 (ENSLLEG00000015539)	ENSLLEG00000015309	ENSLLEG00000015174	ZUP1 (ENSLLEG00000014981)	ENSLLEG00000014949	FAM162B (ENSLLEG00000014905)	GPRC6A (ENSLLEG00000014835)	ENSLLEG00000014772	ENSLLEG00000014686	ENSLLEG00000014658	ENSLLEG00000014601	ENSLLEG00000014531
Coelacanth	MODERN SPECIES	3363																CALHM6 (ENSLACG00000000689) ##20	TRAPPC3L (ENSLACG00000001479)	CALHM5 (ENSLACG00000002146) ##20	RWDD1 (ENSLACG00000003956)
Actinopterygii	ANCESTRAL SPECIES	39	ENSGT00950000183134.c.a.b	ENSGT00390000007224.a	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536	ENSGT00940000155625	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A	ENSGT00940000155184	ENSGT00940000162208	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000156772.b	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Neopterygii	ANCESTRAL SPECIES	5	ENSGT00390000007224.a	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536	ENSGT00940000155625	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A	ENSGT00940000155184	ENSGT00940000162208	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000156772.b.d	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Osteoglossocephalai	ANCESTRAL SPECIES	61	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a
Clupeocephala	ANCESTRAL SPECIES	48	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Euteleosteomorpha	ANCESTRAL SPECIES	58	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155.g	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Acanthomorphata	ANCESTRAL SPECIES	145																ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Euacanthomorphacea	ANCESTRAL SPECIES	28	ENSGT00940000161549.a.b	ENSGT00940000177120	ENSGT00940000166468	ENSGT00390000003774.a.a.d	ENSGT00940000157616.j.b	ENSGT00940000159356.a.a	ENSGT01030000234871	ENSGT00940000160839	ENSGT00950000183051.a.a.b	ENSGT00940000182276	ENSGT00920000149172	ENSGT00940000156446	ENSGT00940000160484	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Percomorphaceae	ANCESTRAL SPECIES		ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Carangaria	ANCESTRAL SPECIES	1	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Carangaria_A	ANCESTRAL SPECIES	9		ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Seriola	ANCESTRAL SPECIES	16				ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Greater amberjack	MODERN SPECIES	75	ENSSDUG00000003699	ENSSDUG00000003805	ENSSDUG00000004008	rbm42 (ENSSDUG00000004033)	ppox (ENSSDUG00000004056)	dyrk1b (ENSSDUG00000004069)	fbl (ENSSDUG00000004103)	sacm1lb (ENSSDUG00000004126)	SLC6A20 (ENSSDUG00000004173)	ggctb (ENSSDUG00000004209)	ENSSDUG00000004218	ENSSDUG00000004245	gpd1l (ENSSDUG00000004259)	TCAIM (ENSSDUG00000004290)	cnot10 (ENSSDUG00000004317)	calhm6 (ENSSDUG00000004440) ##20	calhm5.1 (ENSSDUG00000004451) ##20	rwdd1 (ENSSDUG00000004476)	ENSSDUG00000004503	zufsp (ENSSDUG00000004517)	kpna5 (ENSSDUG00000004538)	gprc6a (ENSSDUG00000004586)	CNIH4 (ENSSDUG00000004700)	WDR26 (ENSSDUG00000004745)	ADCY3 (ENSSDUG00000004785)	preb (ENSSDUG00000004853)	tgfb2 (ENSSDUG00000004888)	rrp15 (ENSSDUG00000004910)	NAGA (ENSSDUG00000004921)	vegfaa (ENSSDUG00000004942)	ENSSDUG00000004957
Yellowtail amberjack	MODERN SPECIES	2975	ENSSLDG00000006824	ENSSLDG00000009741	ENSSLDG00000009762	aldh2.2 (ENSSLDG00000009818)	rbm42 (ENSSLDG00000009918)	ppox (ENSSLDG00000009988)	dyrk1b (ENSSLDG00000010032)	fbl (ENSSLDG00000010053)	sacm1lb (ENSSLDG00000010095)	SLC6A20 (ENSSLDG00000010198)	ggctb (ENSSLDG00000010234)	OSBPL10 (ENSSLDG00000010256)	gpd1l (ENSSLDG00000010319)	TCAIM (ENSSLDG00000010350)	cnot10 (ENSSLDG00000010377)	calhm6 (ENSSLDG00000010452) ##20	calhm5.1 (ENSSLDG00000010468) ##20	rwdd1 (ENSSLDG00000010483)	ENSSLDG00000010508	zufsp (ENSSLDG00000010539)	kpna5 (ENSSLDG00000010571)	ENSSLDG00000010613	gprc6a (ENSSLDG00000010682)	CNIH4 (ENSSLDG00000010752)	WDR26 (ENSSLDG00000010784)	ADCY3 (ENSSLDG00000010852)	preb (ENSSLDG00000010905)	tgfb2 (ENSSLDG00000010932)	rrp15 (ENSSLDG00000010964)	NAGA (ENSSLDG00000010993)	vegfaa (ENSSLDG00000011029)
Barramundi perch	MODERN SPECIES	103																calhm6 (ENSLCAG00010017477) ##20	calhm5.1 (ENSLCAG00010017479) ##20	rwdd1 (ENSLCAG00010017483)	ENSLCAG00010017502	zufsp (ENSLCAG00010017506)	kpna5 (ENSLCAG00010017519)	popdc3 (ENSLCAG00010017540)	bves (ENSLCAG00010017545)	HACE1 (ENSLCAG00010017559)	GRIK2 (ENSLCAG00010017653)	ASCC3 (ENSLCAG00010018250)	sim1a (ENSLCAG00010018664)	cyb5r4 (ENSLCAG00010018673)	cep162 (ENSLCAG00010018688)	ENSLCAG00010018723	ADGRB1 (ENSLCAG00010018819)
Pleuronectoidei	ANCESTRAL SPECIES	36	ENSGT00950000183155.a.b.a.b	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Turbot	MODERN SPECIES	7	tnfaip8l2b (ENSSMAG00000016906)	ENSSMAG00000016914	sema6e (ENSSMAG00000016948)	ENSSMAG00000021944	PTPN23 (ENSSMAG00000017174)	SCAP (ENSSMAG00000017240)	ELP6 (ENSSMAG00000031965)	CSPG5 (ENSSMAG00000017336)	ENSSMAG00000017348	ENSSMAG00000017386	ENSSMAG00000017443	ENSSMAG00000017496	ENSSMAG00000017503	ENSSMAG00000017579	ENSSMAG00000017585	calhm6 (ENSSMAG00000017638) ##20	calhm5.1 (ENSSMAG00000017645) ##20	rwdd1 (ENSSMAG00000017649)	ENSSMAG00000017681	zufsp (ENSSMAG00000017689)	kpna5 (ENSSMAG00000017718)	ENSSMAG00000024541	ENSSMAG00000035983	ENSSMAG00000024704	ENSSMAG00000017770	CD83 (ENSSMAG00000017800)	ENSSMAG00000023524	ENSSMAG00000023851	ENSSMAG00000017838	ENSSMAG00000017850	ENSSMAG00000017869
Tongue sole	MODERN SPECIES	4	dtnbp1a (ENSCSEG00000010224)	ENSCSEG00000010234	aldh2.2 (ENSCSEG00000010239)	rbm42 (ENSCSEG00000010248)	ppox (ENSCSEG00000010271)	dyrk1b (ENSCSEG00000010296)	fbl (ENSCSEG00000010310)	ENSCSEG00000010317	sacm1lb (ENSCSEG00000010329)	SLC6A20 (ENSCSEG00000010363)	ggctb (ENSCSEG00000010421)	OSBPL10 (ENSCSEG00000010428)	gpd1l (ENSCSEG00000010444)	TCAIM (ENSCSEG00000010455)	cnot10 (ENSCSEG00000010464)	calhm6 (ENSCSEG00000010501) ##20	calhm5.1 (ENSCSEG00000010502) ##20	rwdd1 (ENSCSEG00000010516)	ENSCSEG00000010526	zufsp (ENSCSEG00000010533)	kpna5 (ENSCSEG00000010542)	gprc6a (ENSCSEG00000010562)	CNIH4 (ENSCSEG00000010566)	WDR26 (ENSCSEG00000010580)	ADCY3 (ENSCSEG00000010609)	preb (ENSCSEG00000010634)	ENSCSEG00000010647	lyplal1 (ENSCSEG00000010651)	tgfb2 (ENSCSEG00000010667)	rrp15 (ENSCSEG00000010675)	NAGA (ENSCSEG00000010678)
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000157390	ENSGT00390000001960	ENSGT00940000157284.cb.a
Climbing perch	MODERN SPECIES	7	ENSATEG00000000426	ENSATEG00000025304	ENSATEG00000000451	ENSATEG00000000485	ENSATEG00000000536	ENSATEG00000000542	ENSATEG00000030195	ENSATEG00000000569	ENSATEG00000000580	ENSATEG00000000670	ENSATEG00000000725	ENSATEG00000000730	ENSATEG00000000777	ENSATEG00000000824	ENSATEG00000000839	calhm6 (ENSATEG00000000854) ##20	calhm5.1 (ENSATEG00000000863) ##20	rwdd1 (ENSATEG00000000887)	ENSATEG00000000876	zufsp (ENSATEG00000000923)	kpna5 (ENSATEG00000000929)	gprc6a (ENSATEG00000000980)	ENSATEG00000001139	ENSATEG00000001152	ENSATEG00000001160	preb (ENSATEG00000001229)	ENSATEG00000001238	ENSATEG00000001249	ENSATEG00000001337
Siamese fighting fish	MODERN SPECIES	7	snrka (ENSBSLG00000022703)	pomgnt2 (ENSBSLG00000022709)	ENSBSLG00000022711	GASK1A (ENSBSLG00000022713)	ENSBSLG00000022801	vegfaa (ENSBSLG00000022835)	rrp15 (ENSBSLG00000022863)	tgfb2 (ENSBSLG00000022875)	ENSBSLG00000022909	preb (ENSBSLG00000022913)	ADCY3 (ENSBSLG00000022966)	ENSBSLG00000023135	ENSBSLG00000023139	TCAIM (ENSBSLG00000023150)	cnot10 (ENSBSLG00000023196)	calhm6 (ENSBSLG00000023333) ##20	CALHM5 (ENSBSLG00000023335) ##20	rwdd1 (ENSBSLG00000023336)	ENSBSLG00000023343	zufsp (ENSBSLG00000023374)	kpna5 (ENSBSLG00000023388)	gprc6a (ENSBSLG00000023802)	CNIH4 (ENSBSLG00000023844)	WDR26 (ENSBSLG00000023890)	ENSBSLG00000024021	fbl (ENSBSLG00000024023)	dyrk1b (ENSBSLG00000024050)	ppox (ENSBSLG00000024116)	rbm42 (ENSBSLG00000024162)	aldh2.2 (ENSBSLG00000024255)	bves (ENSBSLG00000025401)
Zig-zag eel	MODERN SPECIES	86	dipk1c (ENSMAMG00000008067)	ENSMAMG00000008015	ENSMAMG00000007997	ENSMAMG00000027629	ENSMAMG00000007988	ENSMAMG00000027055	ENSMAMG00000026241	ENSMAMG00000007928	ENSMAMG00000007874	ENSMAMG00000007853	ENSMAMG00000004666	ENSMAMG00000027646	ENSMAMG00000026397	ENSMAMG00000004495	ENSMAMG00000004485	ENSMAMG00000004482 ##20	ENSMAMG00000004445 ##20	ENSMAMG00000028533	ENSMAMG00000004296	ENSMAMG00000000002	ENSMAMG00000004243	ENSMAMG00000004234	ENSMAMG00000027757	ENSMAMG00000026212	ENSMAMG00000013526	ENSMAMG00000027715	ENSMAMG00000017571	ENSMAMG00000004152	ENSMAMG00000021178	ENSMAMG00000025734	ENSMAMG00000025458
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Ballan wrasse	MODERN SPECIES	711												gpd1l (ENSLBEG00000023925)	ENSLBEG00000023944	TCAIM (ENSLBEG00000023968)	cnot10 (ENSLBEG00000024011)	calhm6 (ENSLBEG00000024047) ##20	CALHM5 (ENSLBEG00000024079) ##20	rrp15 (ENSLBEG00000024092)	NAGA (ENSLBEG00000024099)	vegfaa (ENSLBEG00000024128)
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Perciformes	ANCESTRAL SPECIES	3	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT00940000165015	ENSGT00390000016277.a.k	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000160695	ENSGT00420000029769.a	ENSGT00940000157527.a	ENSGT00940000156938.e.f	ENSGT00940000155488.m.b	ENSGT00390000001296	ENSGT00390000012690.a
Cottioidei	ANCESTRAL SPECIES	29	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT00940000165015	ENSGT00390000016277.a.k	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000160695	ENSGT00420000029769.a	ENSGT00940000157527.a	ENSGT00940000156938.e.f	ENSGT00940000155488.m.b	ENSGT00390000001296	ENSGT00390000012690.a
Stickleback	MODERN SPECIES	19	ENSGACG00000003971	dtnbp1a (ENSGACG00000003983)	ENSGACG00000004007	ENSGACG00000004012	aldh2.2 (ENSGACG00000004015)	rbm42 (ENSGACG00000004170)	ppox (ENSGACG00000004180)	dyrk1b (ENSGACG00000004191)	fbl (ENSGACG00000004194)	sacm1lb (ENSGACG00000004294)	SLC6A20 (ENSGACG00000004349)	OSBPL10 (ENSGACG00000004382)	gpd1l (ENSGACG00000004385)	TCAIM (ENSGACG00000004392)	cnot10 (ENSGACG00000004406)	calhm6 (ENSGACG00000004419) ##20	calhm5.1 (ENSGACG00000004425) ##20	riox2 (ENSGACG00000004429)	rwdd1 (ENSGACG00000004457)	ENSGACG00000004471	zufsp (ENSGACG00000004473)	ENSGACG00000004478	taf2 (ENSGACG00000004480)	enpp2 (ENSGACG00000004492)	NOD1 (ENSGACG00000004511)	ENSGACG00000004518	rnf144b (ENSGACG00000004550)	ENSGACG00000004577	atp6v1c1a (ENSGACG00000004615)	azin1a (ENSGACG00000004621)	KLF10 (ENSGACG00000004632)
Perciformes_a	ANCESTRAL SPECIES	38	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT00940000165015	ENSGT00390000016277.a.k	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000160695	ENSGT00420000029769.a	ENSGT00940000157527.a
Pike perch	MODERN SPECIES	40	ENSSLUG00000010675	ENSSLUG00000010679	aldh2.2 (ENSSLUG00000010879)	rbm42 (ENSSLUG00000017901)	ppox (ENSSLUG00000017916)	dyrk1b (ENSSLUG00000018006)	fbl (ENSSLUG00000018126)	sacm1lb (ENSSLUG00000018210)	ENSSLUG00000018313	SLC6A20 (ENSSLUG00000018316)	ggctb (ENSSLUG00000018325)	OSBPL10 (ENSSLUG00000018368)	gpd1l (ENSSLUG00000018408)	TCAIM (ENSSLUG00000018417)	cnot10 (ENSSLUG00000018488)	calhm6 (ENSSLUG00000020126) ##20	calhm5.1 (ENSSLUG00000020133) ##20	rwdd1 (ENSSLUG00000020137)	ENSSLUG00000020154	zufsp (ENSSLUG00000020155)	ENSSLUG00000020160	cndp1 (ENSSLUG00000020173)	ABHD5 (ENSSLUG00000020196)	ano10a (ENSSLUG00000020255)	snrka (ENSSLUG00000021199)	pomgnt2 (ENSSLUG00000021205)	GASK1A (ENSSLUG00000021207)	tgfbr2b (ENSSLUG00000021250)	zgc:77056 (ENSSLUG00000021838)	preb (ENSSLUG00000021845)	ADCY3 (ENSSLUG00000021885)
Channel bull blenny	MODERN SPECIES	7	ENSCGOG00000009986	cdk14 (ENSCGOG00000009990)	fzd1 (ENSCGOG00000010153)	ENSCGOG00000010154	NOD1 (ENSCGOG00000010163)	enpp2 (ENSCGOG00000010472)	taf2 (ENSCGOG00000012329)	ENSCGOG00000012902	dtnbp1a (ENSCGOG00000012933)	sacm1lb (ENSCGOG00000012946)	SLC6A20 (ENSCGOG00000013092)	OSBPL10 (ENSCGOG00000013125)	ENSCGOG00000013138	TCAIM (ENSCGOG00000013141)	cnot10 (ENSCGOG00000013180)	calhm6 (ENSCGOG00000014569) ##20	calhm5.1 (ENSCGOG00000014570) ##20
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00950000183155.a.b.a.b	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00950000183155.a.b.a.b	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Large yellow croaker	MODERN SPECIES	484	cryaa (ENSLCRG00005013212)	ankrd10a (ENSLCRG00005013213)	ddx4 (ENSLCRG00005013232)	UBE3A (ENSLCRG00005014475)	CNGA3 (ENSLCRG00005014496)	ENSLCRG00005014509	atp1b1b (ENSLCRG00005014513)	ENSLCRG00005014515	ENSLCRG00005014522	atg3 (ENSLCRG00005014531)	SLC19A2 (ENSLCRG00005014695)	ENSLCRG00005014696	ENSLCRG00005014698	TCAIM (ENSLCRG00005014700)	cnot10 (ENSLCRG00005014708)	calhm6 (ENSLCRG00005014713) ##20	calhm5.1 (ENSLCRG00005014714) ##20	rwdd1 (ENSLCRG00005014715)	ENSLCRG00005014716	zufsp (ENSLCRG00005014717)	kpna5 (ENSLCRG00005014722)	gprc6a (ENSLCRG00005014830)	CNIH4 (ENSLCRG00005014831)	ENSLCRG00005014832	WDR26 (ENSLCRG00005002978)	ADCY3 (ENSLCRG00005003702)	ENSLCRG00005003760	preb (ENSLCRG00005003784)	SMCO4 (ENSLCRG00005003809)	ENSLCRG00005003815	lyplal1 (ENSLCRG00005003818)
European seabass	MODERN SPECIES	6	ENSDLAG00005021923	ENSDLAG00005021917	ppox (ENSDLAG00005034752)	ENSDLAG00005021808	ENSDLAG00005021795	ENSDLAG00005033526	ENSDLAG00005032164	ENSDLAG00005021701	ENSDLAG00005027416	ENSDLAG00005028349	ENSDLAG00005031796	ENSDLAG00005003394	ENSDLAG00005002611	ENSDLAG00005021545	ENSDLAG00005021298	calhm6 (ENSDLAG00005021278) ##20	calhm5.1 (ENSDLAG00005030426) ##20	rwdd1 (ENSDLAG00005004061)	zufsp (ENSDLAG00005028879)	kpna5 (ENSDLAG00005021221)	gprc6a (ENSDLAG00005021197)	ENSDLAG00005021190	ENSDLAG00005020985	ENSDLAG00005020622	preb (ENSDLAG00005020592)	lyplal1 (ENSDLAG00005020575)	tgfb2 (ENSDLAG00005020553)	RRP15 (ENSDLAG00005020551)	ENSDLAG00005020542	ENSDLAG00005031481	ENSDLAG00005028713
Ovalentaria	ANCESTRAL SPECIES	36	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000155839	ENSGT00940000155610.o.b	ENSGT00940000155377	ENSGT00940000156143.a.a
Cichlidae	ANCESTRAL SPECIES	70			ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000177559	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009631	ENSGT00940000155536	ENSGT00940000156143.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000155536	ENSGT00940000156143.a.a	ENSGT00940000155377	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00940000177559	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	57	ENSGT00940000155536	ENSGT00940000156143.a.a	ENSGT00940000155377	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00940000177559	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a
Haplochromini	ANCESTRAL SPECIES	65	ENSGT00940000155377	ENSGT00940000177907	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00940000179850	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721
Burton s mouthbrooder	MODERN SPECIES	1204														bves (ENSHBUG00000013776)	cnot10 (ENSHBUG00000000407)	calhm6 (ENSHBUG00000013648) ##20	calhm5.1 (ENSHBUG00000013639) ##20	TCAIM (ENSHBUG00000013636)	ENSHBUG00000013609
Haplochromini_A	ANCESTRAL SPECIES	69	ENSGT00940000155377	ENSGT00940000177907	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00940000179850	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721
Haplochromini_B	ANCESTRAL SPECIES	88		ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00940000179850	ENSGT00390000018031	ENSGT00940000155839	ENSGT01100000263556.a.b.a.b.d	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721
Eastern happy	MODERN SPECIES	2	ENSACLG00000005921	rrp15 (ENSACLG00000005886)	rwdd1 (ENSACLG00000005871)	kpna5 (ENSACLG00000005843)	CNIH4 (ENSACLG00000005821)	ENSACLG00000005814	WDR26 (ENSACLG00000005793)	ADCY3 (ENSACLG00000005651)	ENSACLG00000005631	preb (ENSACLG00000005622)	HACE1 (ENSACLG00000005525)	ENSACLG00000005514	popdc3 (ENSACLG00000005508)	bves (ENSACLG00000005470)	cnot10 (ENSACLG00000005427)	calhm6 (ENSACLG00000005415) ##20	calhm5.1 (ENSACLG00000005412) ##20	TCAIM (ENSACLG00000005372)	gpd1l (ENSACLG00000005357)	ENSACLG00000005353	ggctb (ENSACLG00000005344)	ENSACLG00000005338	SLC6A20 (ENSACLG00000005299)	sacm1lb (ENSACLG00000005262)	ENSACLG00000005242	fbl (ENSACLG00000005227)	dyrk1b (ENSACLG00000005208)	ppox (ENSACLG00000005012)	rbm42 (ENSACLG00000004988)	ENSACLG00000004956	taf2 (ENSACLG00000004877)
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005025331	ENSMZEG00005025330	ENSMZEG00005025308	TGFBR2 (ENSMZEG00005025305)	GASK1A (ENSMZEG00005025302)	pomgnt2 (ENSMZEG00005025300)	snrka (ENSMZEG00005025293)	ano10a (ENSMZEG00005025286)	ABHD5 (ENSMZEG00005025282)	cndp1 (ENSMZEG00005025273)	tgfb2 (ENSMZEG00005025271)	ENSMZEG00005025270	popdc3 (ENSMZEG00005025268)	bves (ENSMZEG00005025266)	cnot10 (ENSMZEG00005025264)	calhm6 (ENSMZEG00005025263) ##20	calhm5.1 (ENSMZEG00005025261) ##20	TCAIM (ENSMZEG00005025260)	gpd1l (ENSMZEG00005025259)	ggctb (ENSMZEG00005025256)	SLC6A20 (ENSMZEG00005025253)	sacm1lb (ENSMZEG00005025248)	fbl (ENSMZEG00005025246)	dyrk1b (ENSMZEG00005025241)	ppox (ENSMZEG00005025237)	rbm42 (ENSMZEG00005025234)	aldh2.2 (ENSMZEG00005025227)	taf2 (ENSMZEG00005025215)	ENSMZEG00005025205	enpp2 (ENSMZEG00005025192)	ENSMZEG00005025186
P. nyererei	MODERN SPECIES	836														bves (ENSPNYG00000015032)	cnot10 (ENSPNYG00000015067)	calhm6 (ENSPNYG00000015123) ##20	calhm5.1 (ENSPNYG00000015155) ##20	TCAIM (ENSPNYG00000015175)	gpd1l (ENSPNYG00000015190)
Lyretail cichlid	MODERN SPECIES	440	ENSNBRG00000022147	ASCC3 (ENSNBRG00000022083)	GRIK2 (ENSNBRG00000022048)	rrp15 (ENSNBRG00000022031)	rwdd1 (ENSNBRG00000022011)	kpna5 (ENSNBRG00000021284)	CNIH4 (ENSNBRG00000021125)	WDR26 (ENSNBRG00000021077)	ADCY3 (ENSNBRG00000021044)	preb (ENSNBRG00000020923)	HACE1 (ENSNBRG00000020887)	ENSNBRG00000020870	popdc3 (ENSNBRG00000020859)	bves (ENSNBRG00000020841)	cnot10 (ENSNBRG00000020802)	calhm6 (ENSNBRG00000020788) ##20
Nile tilapia	MODERN SPECIES	2	GRIK2 (ENSONIG00000016534)	ENSONIG00000033942	rrp15 (ENSONIG00000028653)	ENSONIG00000043179	rwdd1 (ENSONIG00000016531)	kpna5 (ENSONIG00000016528)	cnih4 (ENSONIG00000043072)	WDR26 (ENSONIG00000016524)	ADCY3 (ENSONIG00000016520)	ENSONIG00000029075	preb (ENSONIG00000016516)	HACE1 (ENSONIG00000016512)	popdc3 (ENSONIG00000016510)	bves (ENSONIG00000016509)	cnot10 (ENSONIG00000016505)	calhm6 (ENSONIG00000034445) ##20	calhm5.1 (ENSONIG00000028258) ##20	TCAIM (ENSONIG00000016502)	ENSONIG00000016501	ggctb (ENSONIG00000035530)	ENSONIG00000031132	SLC6A20 (ENSONIG00000008058)	sacm1lb (ENSONIG00000008051)	fbl (ENSONIG00000008042)	dyrk1b (ENSONIG00000008036)	ppox (ENSONIG00000008031)	rbm42 (ENSONIG00000008029)	aldh2.2 (ENSONIG00000008021)	taf2 (ENSONIG00000008014)	enpp2 (ENSONIG00000007998)	ENSONIG00000007996
Midas cichlid	MODERN SPECIES	696							cyb5r4 (ENSACIG00000004720)	cep162 (ENSACIG00000004812)	popdc3 (ENSACIG00000004900)	bves (ENSACIG00000004915)	HACE1 (ENSACIG00000004930)	preb (ENSACIG00000004986)	ADCY3 (ENSACIG00000005122)	WDR26 (ENSACIG00000005170)	CNIH4 (ENSACIG00000005207)	calhm6 (ENSACIG00000005227) ##20
Atherinomorphae	ANCESTRAL SPECIES	72				ENSGT00940000156479.a	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00390000018031	ENSGT00390000001960
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00940000156479.a	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00390000018031	ENSGT00390000001960
Aplocheiloidei	ANCESTRAL SPECIES	209														ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00390000018031	ENSGT00390000001960
Mangrove rivulus	MODERN SPECIES	148														TCAIM (ENSKMAG00000011117)	cnot10 (ENSKMAG00000011141)	calhm6 (ENSKMAG00000011195) ##20	calhm5.1 (ENSKMAG00000011200) ##20	ENSKMAG00000011222	sox9a (ENSKMAG00000011239)	ENSKMAG00000011245	ENSKMAG00000011266	ENSKMAG00000011279	TRAPPC9 (ENSKMAG00000011325)	sh3bgrl3 (ENSKMAG00000011419)	paqr7a (ENSKMAG00000011432)	TMEM222 (ENSKMAG00000011442)	tpbga (ENSKMAG00000011469)
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015000345	ENSNFUG00015000349	GRIK2 (ENSNFUG00015000764)	ASCC3 (ENSNFUG00015002007)	ENSNFUG00015002948	ENSNFUG00015002949	sim1a (ENSNFUG00015002959)	cyb5r4 (ENSNFUG00015002981)	KIAA1009 (ENSNFUG00015002985)	ENSNFUG00015002999	ALDH2 (ENSNFUG00015003353)	FBL (ENSNFUG00015004300)	dyrk1b (ENSNFUG00015004322)	TCAIM (ENSNFUG00015004360)	cnot10 (ENSNFUG00015004532)	FAM26F (ENSNFUG00015005359) ##20	FAM26E (ENSNFUG00015005362) ##20	RWDD1 (ENSNFUG00015005364)	zufsp (ENSNFUG00015005370)	kpna5 (ENSNFUG00015005512)	CNIH4 (ENSNFUG00015006712)	ENSNFUG00015006730	ENSNFUG00015006735	PREB (ENSNFUG00015006741)	rrp15 (ENSNFUG00015006755)	rbm42 (ENSNFUG00015006761)	PPOX (ENSNFUG00015006786)	ggctb (ENSNFUG00015006879)	ENSNFUG00015006884	sacm1lb (ENSNFUG00015006910)	myo1eb (ENSNFUG00015007047)
Cyprinodontoidei	ANCESTRAL SPECIES	120																ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT00950000182834.B	ENSGT00390000018031
Poeciliinae	ANCESTRAL SPECIES	22											ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00950000182834.B	ENSGT00940000166924	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000001827	ENSGT00390000012832	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000156479.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a
Poecilia	ANCESTRAL SPECIES	87												ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00950000182834.B	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000001827	ENSGT00390000012832	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240.w	ENSGT00940000156479.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a
NAME_6	ANCESTRAL SPECIES	478															ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000001827	ENSGT00390000012832
Amazon molly	MODERN SPECIES	1188															rwdd1 (ENSPFOG00000018542)	calhm6 (ENSPFOG00000021889) ##20	calhm5.1 (ENSPFOG00000018548) ##20	cnot10 (ENSPFOG00000018554)
Sailfin molly	MODERN SPECIES	1533															rwdd1 (ENSPLAG00000014798)	calhm6 (ENSPLAG00000014805) ##20	calhm5.1 (ENSPLAG00000014831) ##20	cnot10 (ENSPLAG00000014935)	TCAIM (ENSPLAG00000014949)	ENSPLAG00000014958
Guppy	MODERN SPECIES	446	pus7 (ENSPREG00000019080)	zgc:172339 (ENSPREG00000019059)	aplnr2 (ENSPREG00000019056)	hdac10 (ENSPREG00000019031)	parvb (ENSPREG00000018836)	parvg (ENSPREG00000018764)	SHISAL1 (ENSPREG00000018737)	plxnb2b (ENSPREG00000018664)	TUBGCP6 (ENSPREG00000018614)	appl2 (ENSPREG00000018534)	ENSPREG00000018504	ADCY3 (ENSPREG00000018460)	preb (ENSPREG00000018439)	CNIH4 (ENSPREG00000018420)	rwdd1 (ENSPREG00000018397)	calhm6 (ENSPREG00000018386) ##20	calhm5.1 (ENSPREG00000018380) ##20	cnot10 (ENSPREG00000018348)	TCAIM (ENSPREG00000018323)	ggctb (ENSPREG00000018288)	SLC6A20 (ENSPREG00000018263)	ENSPREG00000018252	sacm1lb (ENSPREG00000018187)	fbl (ENSPREG00000018169)	dyrk1b (ENSPREG00000018152)	ppox (ENSPREG00000018136)	rbm42 (ENSPREG00000018102)	ENSPREG00000018083	aldh2.2 (ENSPREG00000018040)	ENSPREG00000018010	dtnbp1a (ENSPREG00000017991)
Platyfish	MODERN SPECIES	17											ADCY3 (ENSXMAG00000004364)	preb (ENSXMAG00000022783)	CNIH4 (ENSXMAG00000027221)	zufsp (ENSXMAG00000004312)	rwdd1 (ENSXMAG00000004313)	calhm6 (ENSXMAG00000004325) ##20	calhm5.1 (ENSXMAG00000004326) ##20	ENSXMAG00000024570	cnot10 (ENSXMAG00000004332)	TCAIM (ENSXMAG00000015223)	ggctb (ENSXMAG00000025798)	SLC6A20 (ENSXMAG00000025671)	ENSXMAG00000023746	sacm1lb (ENSXMAG00000008541)	fbl (ENSXMAG00000008522)	dyrk1b (ENSXMAG00000003585)	ppox (ENSXMAG00000026912)	rbm42 (ENSXMAG00000012827)	ENSXMAG00000025594	aldh2.2 (ENSXMAG00000024027)	ENSXMAG00000025592
NAME_4	ANCESTRAL SPECIES	471																ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924
Mummichog	MODERN SPECIES	1635																calhm6 (ENSFHEG00000019810) ##20	ENSFHEG00000019739
Sheepshead minnow	MODERN SPECIES	190															pola1 (ENSCVAG00000014504)	calhm6 (ENSCVAG00000014514) ##20	calhm5.1 (ENSCVAG00000014518) ##20	rwdd1 (ENSCVAG00000014549)	zufsp (ENSCVAG00000014574)	CNIH4 (ENSCVAG00000014599)	preb (ENSCVAG00000000371)	ENSCVAG00000014616	epha7 (ENSCVAG00000014629)	ENSCVAG00000014675	ADRA1D (ENSCVAG00000014682)	LRRTM1 (ENSCVAG00000014688)	ctnna2 (ENSCVAG00000014742)
Oryzias	ANCESTRAL SPECIES	90											ENSGT00940000155610.o.b	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009631	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000160695
Oryzias_b	ANCESTRAL SPECIES	119											ENSGT00940000155610.o.b	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00940000170371	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000160695
Javanese ricefish	DUPLICATION
Javanese ricefish	MODERN SPECIES	7	EIF3E (ENSOJAG00000008399)	emc2 (ENSOJAG00000008476)	TMEM74 (ENSOJAG00000008575)	ENSOJAG00000008602	TRHR (ENSOJAG00000008635)	ENSOJAG00000008654	ENY2 (ENSOJAG00000008700)	gdf6a (ENSOJAG00000008753)	ENSOJAG00000008844	sybu (ENSOJAG00000008884)	ebag9 (ENSOJAG00000008896)	ENSOJAG00000008922	ASCC3 (ENSOJAG00000009078)	cyb5r4 (ENSOJAG00000009780)	CNIH4 (ENSOJAG00000009862)	calhm6 (ENSOJAG00000009878) ##20	calhm5.1 (ENSOJAG00000009884) ##20	ENSOJAG00000009901	ENSOJAG00000009955	ENSOJAG00000009970	mc2r (ENSOJAG00000010001)	ENSOJAG00000010023	RSPO2 (ENSOJAG00000010054)	ENSOJAG00000010115	hamp2 (ENSOJAG00000010151)	ENSOJAG00000010255	ENSOJAG00000010510	ENSOJAG00000010541	zgc:91890 (ENSOJAG00000010827)	NFATC1 (ENSOJAG00000010838)	SALL3 (ENSOJAG00000010844)
Javanese ricefish	MODERN SPECIES	134																calhm6 (ENSOJAG00000004921) ##20
Indian medaka	MODERN SPECIES	648																calhm6 (ENSOMEG00000021501) ##20
Oryzias_a	DUPLICATION
Oryzias_a	ANCESTRAL SPECIES																	ENSGT01030000234610.a.a.`b ##20
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	MODERN SPECIES	7	ENSORLG00000003852	ENSORLG00000003860	taf2 (ENSORLG00000003911)	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)	zgc:77056 (ENSORLG00000004295)	ENSORLG00000022263	zdhhc3a (ENSORLG00000004309)
Japanese Medaka HdrR	MODERN SPECIES	7	ENSORLG00000003860	taf2 (ENSORLG00000003911)	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)	zgc:77056 (ENSORLG00000004295)	ENSORLG00000022263	zdhhc3a (ENSORLG00000004309)	mc2r (ENSORLG00000029881)
Chinese medaka	MODERN SPECIES	3879																ENSOSIG00000005832 ##20
Oryzias_a	DUPLICATION
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT00940000157432.B	ENSGT01000000214440.A.a.a	ENSGT00940000157640	ENSGT00940000162584.j.b	ENSGT00940000179051	ENSGT00940000162584.j.a.a	ENSGT00940000159017.a.a	ENSGT00940000157845	ENSGT00940000155778.B	ENSGT00390000000420	ENSGT00940000155610.o.b	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009168	ENSGT01030000234610.a.a.ab.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009631	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000160695	ENSGT00950000182834.B	ENSGT00940000155536	ENSGT00940000155377	ENSGT00940000158391.g.b.a	ENSGT00940000155488.m.b	ENSGT00390000001296	ENSGT00390000012690.a	ENSGT00940000155721.b.b	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	DUPLICATION
Japanese Medaka HdrR	MODERN SPECIES	7	znrf2b (ENSORLG00000026834)	NOD1 (ENSORLG00000003812)	ENSORLG00000003852	ENSORLG00000003860	taf2 (ENSORLG00000003911)	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)	zgc:77056 (ENSORLG00000004295)
Japanese Medaka HdrR	MODERN SPECIES	7	NOD1 (ENSORLG00000003812)	ENSORLG00000003852	ENSORLG00000003860	taf2 (ENSORLG00000003911)	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)	zgc:77056 (ENSORLG00000004295)	ENSORLG00000022263
Japanese Medaka HdrR	MODERN SPECIES	7	fzd1 (ENSORLG00000025314)	znrf2b (ENSORLG00000026834)	NOD1 (ENSORLG00000003812)	ENSORLG00000003852	ENSORLG00000003860	taf2 (ENSORLG00000003911)	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)
Chinese medaka	MODERN SPECIES	36															rwdd1 (ENSOSIG00000011937)	calhm6 (ENSOSIG00000011935) ##20	calhm5.1 (ENSOSIG00000011934) ##20	cep162 (ENSOSIG00000011932)	ENSOSIG00000011930	aldh2.2 (ENSOSIG00000006893)	pomgnt2 (ENSOSIG00000006845)	CNIH4 (ENSOSIG00000006842)	cyb5r4 (ENSOSIG00000006839)	ASCC3 (ENSOSIG00000005567)	GADL1 (ENSOSIG00000000522)	stt3b (ENSOSIG00000000465)	zgc:77056 (ENSOSIG00000000455)	tmem42a (ENSOSIG00000000453)	zdhhc3a (ENSOSIG00000000449)	mc2r (ENSOSIG00000000445)	mc5rb (ENSOSIG00000000423)
Oryzias_a	ANCESTRAL SPECIES																	ENSGT01030000234610.a.a.ab.b ##20
Chinese medaka	DUPLICATION
Chinese medaka	MODERN SPECIES	3013																calhm6 (ENSOSIG00000009160) ##20
Chinese medaka	MODERN SPECIES	3587																ENSOSIG00000002498 ##20
Japanese Medaka HdrR	MODERN SPECIES	7	taf2 (ENSORLG00000003911)	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)	zgc:77056 (ENSORLG00000004295)	ENSORLG00000022263	zdhhc3a (ENSORLG00000004309)	mc2r (ENSORLG00000029881)	mc5rb (ENSORLG00000004348)
Tiger tail seahorse	MODERN SPECIES	288	ENSHCOG00000021218	ENSHCOG00000021217	aldh2.2 (ENSHCOG00000021215)	rbm42 (ENSHCOG00000021214)	ppox (ENSHCOG00000021213)	dyrk1b (ENSHCOG00000021212)	fbl (ENSHCOG00000021211)	sacm1lb (ENSHCOG00000021209)	SLC6A20 (ENSHCOG00000021208)	SLC6A20 (ENSHCOG00000021207)	ggctb (ENSHCOG00000021206)	OSBPL10 (ENSHCOG00000021204)	gpd1l (ENSHCOG00000021202)	TCAIM (ENSHCOG00000021200)	cnot10 (ENSHCOG00000021197)	calhm6 (ENSHCOG00000021194) ##20	calhm5.1 (ENSHCOG00000021192) ##20	rwdd1 (ENSHCOG00000021189)	zufsp (ENSHCOG00000021187)	kpna5 (ENSHCOG00000021185)	gprc6a (ENSHCOG00000021184)	CNIH4 (ENSHCOG00000021182)	WDR26 (ENSHCOG00000021180)	ADCY3 (ENSHCOG00000021175)	preb (ENSHCOG00000021172)	lyplal1 (ENSHCOG00000021169)	tgfb2 (ENSHCOG00000021165)	rrp15 (ENSHCOG00000021163)	vegfaa (ENSHCOG00000021159)	popdc3 (ENSHCOG00000021156)	bves (ENSHCOG00000021154)
Pinecone sodierfish	MODERN SPECIES	7	ENSMMDG00005022797	zgc:91890 (ENSMMDG00005022798)	NFATC1 (ENSMMDG00005022799)	SALL3 (ENSMMDG00005022800)	ENSMMDG00005022802	mbpb (ENSMMDG00005022804)	ENSMMDG00005022805	ZNF236 (ENSMMDG00005022806)	ZNF516 (ENSMMDG00005022812)	TSHZ1 (ENSMMDG00005022813)	PTGR3 (ENSMMDG00005022815)	ZNF407 (ENSMMDG00005022816)	CNDP1 (ENSMMDG00005022820)	TCAIM (ENSMMDG00005022916)	cnot10 (ENSMMDG00005023045)	calhm6 (ENSMMDG00005023416) ##20	calhm5.1 (ENSMMDG00005023417) ##20	rwdd1 (ENSMMDG00005008279)	ENSMMDG00005008321	ENSMMDG00005009113	sult2st3 (ENSMMDG00005009114)	tmem147 (ENSMMDG00005009117)	ENSMMDG00005009120	gapdhs (ENSMMDG00005009131)	SCX (ENSMMDG00005009170)	ENSMMDG00005009173	hpn (ENSMMDG00005009181)	ENSMMDG00005009191	ENSMMDG00005009194	fxyd3 (ENSMMDG00005009197)	sdha (ENSMMDG00005009277)
Cod	MODERN SPECIES	2	RSPO2 (ENSGMOG00000026535)	ENSGMOG00000006545	ENSGMOG00000034847	ENSGMOG00000032792	ENSGMOG00000022230	zgc:91890 (ENSGMOG00000006625)	NFATC1 (ENSGMOG00000006631)	SALL3 (ENSGMOG00000035951)	GALR1 (ENSGMOG00000018051)	ENSGMOG00000027182	ZNF236 (ENSGMOG00000006668)	ZNF516 (ENSGMOG00000025897)	TSHZ1 (ENSGMOG00000032771)	PTGR3 (ENSGMOG00000006772)	ENSGMOG00000006780	calhm6 (ENSGMOG00000007041) ##20	calhm5.1 (ENSGMOG00000007051) ##20	rwdd1 (ENSGMOG00000009852)	ENSGMOG00000007067	zufsp (ENSGMOG00000007079)	kpna5 (ENSGMOG00000007147)	gprc6a (ENSGMOG00000007217)	ENSGMOG00000023864	ENSGMOG00000017396	RRP15 (ENSGMOG00000017385)	tgfb2 (ENSGMOG00000017371)	ENSGMOG00000024728	lyplal1 (ENSGMOG00000014091)	preb (ENSGMOG00000014062)	ENSGMOG00000014013	ENSGMOG00000013975
Protacanthopterygii	ANCESTRAL SPECIES	50	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b.e	ENSGT00940000163155.g	ENSGT00940000157719	ENSGT01060000248664	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	32	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.h	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.f
Huchen	MODERN SPECIES	716			prdm13 (ENSHHUG00000001290)	zgc:172323 (ENSHHUG00000001276)	tstd3 (ENSHHUG00000001251)	usp45 (ENSHHUG00000001208)	ENSHHUG00000001200	coq3 (ENSHHUG00000001197)	FAXC (ENSHHUG00000001193)	fbxl4 (ENSHHUG00000001181)	ENSHHUG00000001127	pou3f2b (ENSHHUG00000001124)	ENSHHUG00000001101	ENSHHUG00000001072	ENSHHUG00000001067	calhm6 (ENSHHUG00000001064) ##20	CALHM5 (ENSHHUG00000001034) ##20	CLEC3B (ENSHHUG00000001026)	ENSHHUG00000001007	CNIH4 (ENSHHUG00000000958)	WDR26 (ENSHHUG00000000821)	ADCY3 (ENSHHUG00000000792)	preb (ENSHHUG00000000762)	lyplal1 (ENSHHUG00000000755)	tgfb2 (ENSHHUG00000000687)	rrp15 (ENSHHUG00000000658)	ENSHHUG00000000446	NAGA (ENSHHUG00000000279)	vegfaa (ENSHHUG00000000260)	gpatch3 (ENSHHUG00000000200)
Salmoninae_a	ANCESTRAL SPECIES	39	ENSGT00950000183068.b.c.a.f.a.b	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000164536.a.b.e.b	ENSGT00940000154272.A.c	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000164932	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.h	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155194.v.b.c	ENSGT00390000013174.d	ENSGT00940000157034.k
Salmo	ANCESTRAL SPECIES	1	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000164536.a.b.e.b	ENSGT00940000154272.A.c	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000164932	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.g.a	ENSGT00990000212421	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c.a	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155194.v.b.c	ENSGT00390000013174.d	ENSGT00940000157034.k
River trout	MODERN SPECIES	22	ENSSTUG00000000216	MCHR2 (ENSSTUG00000000170)	prdm13 (ENSSTUG00000000169)	zgc:172323 (ENSSTUG00000000167)	ENSSTUG00000000165	usp45 (ENSSTUG00000000145)	ENSSTUG00000000111	coq3 (ENSSTUG00000000108)	FAXC (ENSSTUG00000000105)	fbxl4 (ENSSTUG00000000104)	ENSSTUG00000000060	pou3f2b (ENSSTUG00000000053)	ENSSTUG00000047321	mms22l (ENSSTUG00000047312)	klhl32 (ENSSTUG00000047293)	calhm6 (ENSSTUG00000047289) ##20	CALHM5 (ENSSTUG00000047286) ##20	CLEC3B (ENSSTUG00000047279)	ENSSTUG00000047266	CNIH4 (ENSSTUG00000047263)	WDR26 (ENSSTUG00000047200)	ADCY3 (ENSSTUG00000047107)	preb (ENSSTUG00000047056)	lyplal1 (ENSSTUG00000047035)	tgfb2 (ENSSTUG00000047009)	rrp15 (ENSSTUG00000046995)	ENSSTUG00000046992	NAGA (ENSSTUG00000046944)	vegfaa (ENSSTUG00000046922)	gpn2 (ENSSTUG00000046892)	ENSSTUG00000046200
Atlantic salmon	MODERN SPECIES	24	SNAP91 (ENSSSAG00000003416)	prss35 (ENSSSAG00000088322)	ME1 (ENSSSAG00000003083)	ENSSSAG00000066203	zgc:172323 (ENSSSAG00000002999)	ENSSSAG00000002985	usp45 (ENSSSAG00000002007)	pnisr (ENSSSAG00000001940)	coq3 (ENSSSAG00000001931)	FAXC (ENSSSAG00000112824)	fbxl4 (ENSSSAG00000066863)	ENSSSAG00000066861	ENSSSAG00000092491	klhl32 (ENSSSAG00000066604)	ENSSSAG00000090299 ##20	calhm6 (ENSSSAG00000067297) ##20	clec3ba (ENSSSAG00000066581)	ENSSSAG00000066565	ENSSSAG00000099197	ENSSSAG00000097236	ENSSSAG00000065817	ENSSSAG00000065100	PREB (ENSSSAG00000065064)	lyplal1 (ENSSSAG00000114678)	tgfb2 (ENSSSAG00000112951)	ENSSSAG00000064843	ENSSSAG00000096615	ENSSSAG00000088922	ENSSSAG00000064269	ENSSSAG00000090864	ENSSSAG00000081883
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00390000016421.b.b.ab	ENSGT00950000183068.b.c.a.f.a.b	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.g.a	ENSGT00940000162208.`c.a.a	ENSGT00950000182966.A.a.a.q.b	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v.a	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155634.r	ENSGT00390000013174.d	ENSGT00940000157034.k
Rainbow trout	MODERN SPECIES	11	ME1 (ENSOMYG00000040173)	prdm13 (ENSOMYG00000042461)	zgc:172323 (ENSOMYG00000042468)	usp45 (ENSOMYG00000042501)	ENSOMYG00000061478	ENSOMYG00000042575	coq3 (ENSOMYG00000056709)	FAXC (ENSOMYG00000042605)	fbxl4 (ENSOMYG00000000094)	ENSOMYG00000000099	pou3f2b (ENSOMYG00000042617)	ENSOMYG00000049595	ENSOMYG00000000116	ENSOMYG00000076687	klhl32 (ENSOMYG00000000141)	calhm6 (ENSOMYG00000000154) ##20	ENSOMYG00000000157 ##20	ENSOMYG00000000168	ENSOMYG00000000221	ENSOMYG00000000242	ENSOMYG00000000389	ENSOMYG00000000480	preb (ENSOMYG00000000508)	lyplal1 (ENSOMYG00000000518)	tgfb2 (ENSOMYG00000000524)	ENSOMYG00000052309	RRP15 (ENSOMYG00000000540)	ENSOMYG00000000625	ENSOMYG00000075765	ENSOMYG00000000680	ENSOMYG00000061903
Oncorhynchus_a	ANCESTRAL SPECIES	39	ENSGT00950000183068.b.c.a.f.a.b	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.g.a	ENSGT01060000251668	ENSGT00940000162208.`c.a.a	ENSGT00950000182966.A.a.a.q.b	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v.a	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155634.r	ENSGT00390000013174.d	ENSGT00940000157034.k
Coho salmon	MODERN SPECIES	4	prss35 (ENSOKIG00005010557)	ME1 (ENSOKIG00005009034)	prdm13 (ENSOKIG00005008929)	zgc:172323 (ENSOKIG00005008902)	usp45 (ENSOKIG00005008628)	ENSOKIG00005008542	coq3 (ENSOKIG00005008521)	ENSOKIG00005008516	FAXC (ENSOKIG00005008495)	fbxl4 (ENSOKIG00005008388)	ENSOKIG00005008350	pou3f2b (ENSOKIG00005008346)	ENSOKIG00005008338	ENSOKIG00005008317	klhl32 (ENSOKIG00005007985)	calhm6 (ENSOKIG00005007934) ##20	CALHM5 (ENSOKIG00005007923) ##20	CLEC3B (ENSOKIG00005007908)	ENSOKIG00005007873	CNIH4 (ENSOKIG00005007854)	WDR26 (ENSOKIG00005007431)	ADCY3 (ENSOKIG00005007287)	preb (ENSOKIG00005007247)	lyplal1 (ENSOKIG00005007205)	tgfb2 (ENSOKIG00005007159)	rrp15 (ENSOKIG00005007123)	NAGA (ENSOKIG00005007071)	ENSOKIG00005007011	ARID1A (ENSOKIG00005006522)	PIGV (ENSOKIG00005006460)	tcea3 (ENSOKIG00005006353)
Chinook salmon	MODERN SPECIES	15	ME1 (ENSOTSG00005012994)	prdm13 (ENSOTSG00005017063)	zgc:172323 (ENSOTSG00005017065)	usp45 (ENSOTSG00005002712)	ENSOTSG00005002838	coq3 (ENSOTSG00005002853)	FAXC (ENSOTSG00005002867)	fbxl4 (ENSOTSG00005002873)	ENSOTSG00005002899	pou3f2b (ENSOTSG00005002902)	slc39a9 (ENSOTSG00005002906)	PLEKHD1 (ENSOTSG00005002915)	ENSOTSG00005002920	ENSOTSG00005002925	klhl32 (ENSOTSG00005002930)	calhm6 (ENSOTSG00005002936) ##20	CALHM5 (ENSOTSG00005002941) ##20	CLEC3B (ENSOTSG00005002944)	FEZ2 (ENSOTSG00005002951)	CNIH4 (ENSOTSG00005002967)	WDR26 (ENSOTSG00005002988)	ADCY3 (ENSOTSG00005003666)	preb (ENSOTSG00005004135)	lyplal1 (ENSOTSG00005004139)	tgfb2 (ENSOTSG00005004144)	rrp15 (ENSOTSG00005004148)	ENSOTSG00005004151	NAGA (ENSOTSG00005004153)	vegfaa (ENSOTSG00005004156)	ENSOTSG00005004179	ENSOTSG00005004195
Salmoninae	ANCESTRAL SPECIES	868																ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g
Huchen	MODERN SPECIES	2282														mms22l (ENSHHUG00000051787)	klhl32 (ENSHHUG00000032645)	calhm6 (ENSHHUG00000032658) ##20	ENSHHUG00000032670	CALHM5 (ENSHHUG00000032671) ##20	CNIH4 (ENSHHUG00000032673)	WDR26 (ENSHHUG00000032677)
Salmoninae_a	ANCESTRAL SPECIES	90	ENSGT00950000183068.b.c.a.f.a.a	ENSGT00390000000155.b.b.d	ENSGT00950000183134.c.a.b.a	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00390000001960.u	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a	ENSGT00940000164873
Salmo	ANCESTRAL SPECIES	32	ENSGT00390000016421.b.b.`b	ENSGT00950000183068.b.c.a.e	ENSGT00390000000155.b.b.d	ENSGT00950000183134.c.a.b.a	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT00730000111138	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00390000011769.c	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00950000183186.B.b.c.b	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00390000001960.u	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a.a
River trout	MODERN SPECIES	30	SNAP91 (ENSSTUG00000045787)	prss35 (ENSSTUG00000045899)	ME1 (ENSSTUG00000045918)	MCHR2 (ENSSTUG00000046174)	prdm13 (ENSSTUG00000046180)	zgc:172323 (ENSSTUG00000046189)	tstd3 (ENSSTUG00000046201)	usp45 (ENSSTUG00000046215)	pnisr (ENSSTUG00000046329)	coq3 (ENSSTUG00000046344)	FAXC (ENSSTUG00000046360)	fbxl4 (ENSSTUG00000046367)	pou3f2b (ENSSTUG00000046400)	mms22l (ENSSTUG00000046412)	klhl32 (ENSSTUG00000046454)	calhm6 (ENSSTUG00000046638) ##20	CALHM5 (ENSSTUG00000046640) ##20	CLEC3B (ENSSTUG00000046645)	ENSSTUG00000046653	CNIH4 (ENSSTUG00000046666)	WDR26 (ENSSTUG00000046681)	ADCY3 (ENSSTUG00000046777)	preb (ENSSTUG00000046977)	lyplal1 (ENSSTUG00000046983)	ENSSTUG00000046989	tgfb2 (ENSSTUG00000046994)	rrp15 (ENSSTUG00000047014)	NAGA (ENSSTUG00000047038)	vegfaa (ENSSTUG00000047255)	SCMH1 (ENSSTUG00000047262)	cited4b (ENSSTUG00000047280)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00950000183134.c.a.b.a	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000164536.a.b.e.b	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a.a.a	ENSGT00950000182919.A.o.g.a.b	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00980000202590	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a	ENSGT00940000164873
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00950000183134.c.a.b.a	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000164536.a.b.e.b	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a.a.a	ENSGT00950000182919.A.o.g.a.b	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00980000202590	ENSGT00970000196976.B	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a
Coho salmon	MODERN SPECIES	11	prss35 (ENSOKIG00005000947)	ENSOKIG00005000999	MCHR2 (ENSOKIG00005001085)	prdm13 (ENSOKIG00005001091)	zgc:172323 (ENSOKIG00005001095)	tstd3 (ENSOKIG00005001101)	usp45 (ENSOKIG00005001130)	ENSOKIG00005001170	coq3 (ENSOKIG00005001185)	FAXC (ENSOKIG00005001189)	fbxl4 (ENSOKIG00005001202)	pou3f2b (ENSOKIG00005001217)	ENSOKIG00005001221	mms22l (ENSOKIG00005001245)	klhl32 (ENSOKIG00005001284)	calhm6 (ENSOKIG00005001320) ##20	CALHM5 (ENSOKIG00005001324) ##20	FEZ2 (ENSOKIG00005001335)	CNIH4 (ENSOKIG00005001346)	WDR26 (ENSOKIG00005001382)	ADCY3 (ENSOKIG00005001555)	preb (ENSOKIG00005001603)	lyplal1 (ENSOKIG00005001619)	tgfb2 (ENSOKIG00005001627)	ENSOKIG00005001636	ENSOKIG00005001640	ENSOKIG00005001641	vegfaa (ENSOKIG00005001653)	SCMH1 (ENSOKIG00005001662)	cited4b (ENSOKIG00005001670)	ctps1b (ENSOKIG00005001681)
Chinook salmon	MODERN SPECIES	22	eva1ba (ENSOTSG00005011369)	sh3d21 (ENSOTSG00005011372)	THRAP3 (ENSOTSG00005011377)	ENSOTSG00005011382	MAP7D1 (ENSOTSG00005011384)	ENSOTSG00005000717	SNIP1 (ENSOTSG00005002012)	dnali1 (ENSOTSG00005002016)	gnl2 (ENSOTSG00005002018)	rspo1 (ENSOTSG00005002019)	FHL3 (ENSOTSG00005002021)	utp11 (ENSOTSG00005002023)	pou3f1 (ENSOTSG00005002026)	mms22l (ENSOTSG00005002033)	klhl32 (ENSOTSG00005002042)	calhm6 (ENSOTSG00005002060) ##20	CALHM5 (ENSOTSG00005002062) ##20	ENSOTSG00005002063	CNIH4 (ENSOTSG00005002066)	WDR26 (ENSOTSG00005002078)	ADCY3 (ENSOTSG00005004233)	preb (ENSOTSG00005005222)	lyplal1 (ENSOTSG00005005225)	tgfb2 (ENSOTSG00005005228)	rrp15 (ENSOTSG00005005231)	ENSOTSG00005005232	NAGA (ENSOTSG00005005238)	vegfaa (ENSOTSG00005005278)	SCMH1 (ENSOTSG00005005279)	cited4b (ENSOTSG00005005280)	ctps1b (ENSOTSG00005005284)
Rainbow trout	MODERN SPECIES	21	MCHR2 (ENSOMYG00000006997)	prdm13 (ENSOMYG00000007035)	zgc:172323 (ENSOMYG00000007100)	tstd3 (ENSOMYG00000007121)	usp45 (ENSOMYG00000007543)	ENSOMYG00000007717	coq3 (ENSOMYG00000007731)	FAXC (ENSOMYG00000007743)	ENSOMYG00000072280	ENSOMYG00000007763	fbxl4 (ENSOMYG00000007888)	ENSOMYG00000066894	pou3f2b (ENSOMYG00000007931)	mms22l (ENSOMYG00000008087)	klhl32 (ENSOMYG00000008179)	calhm6 (ENSOMYG00000008200) ##20	ENSOMYG00000008222 ##20	ENSOMYG00000008293	ENSOMYG00000008325	ENSOMYG00000055303	ENSOMYG00000008508	ENSOMYG00000009090	preb (ENSOMYG00000010110)	lyplal1 (ENSOMYG00000010154)	tgfb2 (ENSOMYG00000010167)	RRP15 (ENSOMYG00000010205)	ENSOMYG00000060367	ENSOMYG00000010253	ENSOMYG00000073357	vegf (ENSOMYG00000010298)	ENSOMYG00000010321
Northern pike	MODERN SPECIES	19	SNAP91 (ENSELUG00000021382)	prss35 (ENSELUG00000021420)	me1 (ENSELUG00000001462)	prdm13 (ENSELUG00000021488)	zgc:172323 (ENSELUG00000021548)	tstd3 (ENSELUG00000021558)	usp45 (ENSELUG00000021576)	ENSELUG00000021610	FAXC (ENSELUG00000021686)	fbxl4 (ENSELUG00000021753)	ENSELUG00000031675	pou3f2b (ENSELUG00000021783)	ENSELUG00000021822	mms22l (ENSELUG00000021852)	klhl32 (ENSELUG00000021919)	calhm6 (ENSELUG00000021932) ##20	CALHM5 (ENSELUG00000026396) ##20	ENSELUG00000033369	CALHM5 (ENSELUG00000021954) ##20	CALHM5 (ENSELUG00000021974) ##20	CLEC3B (ENSELUG00000021991)	ENSELUG00000022022	CNIH4 (ENSELUG00000022088)	WDR26 (ENSELUG00000022137)	ADCY3 (ENSELUG00000022209)	preb (ENSELUG00000022220)	lyplal1 (ENSELUG00000021027)	tgfb2 (ENSELUG00000024911)	rrp15 (ENSELUG00000011708)	ENSELUG00000030588	ENSELUG00000029571
Otomorpha	ANCESTRAL SPECIES	62	ENSGT00950000183068.b.c.a	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Otophysi	ANCESTRAL SPECIES	56	ENSGT00950000183068.b.c.a	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Cyprinoidei	ANCESTRAL SPECIES	60	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A.a	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000164601	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000161197	ENSGT00390000014743.j	ENSGT00550000075069	ENSGT00940000154244.B	ENSGT00510000048131	ENSGT01050000244894.a.a.a.a	ENSGT01030000234564.a.b	ENSGT00440000033697.bb.a	ENSGT00440000033697.bb.b.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	28	ENSGT00950000183068.b.c.a.b.a	ENSGT00390000000155.b.b.b	ENSGT00950000183134.c.a.b.e	ENSGT00940000154272.A.b	ENSGT00940000160200.e	ENSGT00940000164536.a.b.c	ENSGT00940000163155.f	ENSGT00940000157719.c	ENSGT00730000111138.b	ENSGT00390000007284.c	ENSGT00950000182919.A.p.g.a.b	ENSGT00940000155184.i	ENSGT00940000162208.`c.a.d	ENSGT00390000011769.b	ENSGT00940000157179.a	ENSGT01030000234610.a.a.db ##20	ENSGT01030000234610.a.b.j ##20	ENSGT00390000009168.d	ENSGT00940000156772.a.a	ENSGT00940000166924.c	ENSGT01050000244950.a.a.b.g	ENSGT00940000158416.q.a.b	ENSGT00940000161197.g	ENSGT00390000014743.j.a	ENSGT00550000075069.m	ENSGT00940000177689	ENSGT01050000244894.a.a.a.a.d	ENSGT01030000234564.a.b.m	ENSGT00440000033697.bb.a.b	ENSGT00440000033697.bb.b.a	ENSGT00440000033697.bb.b.b
Goldfish	MODERN SPECIES	7	DOP1A (ENSCARG00000013004)	SNAP91 (ENSCARG00000013226)	ENSCARG00000013240	prss35 (ENSCARG00000013246)	ME1 (ENSCARG00000013332)	prdm13 (ENSCARG00000015922)	zgc:172323 (ENSCARG00000015927)	usp45 (ENSCARG00000015957)	pnisr (ENSCARG00000016342)	coq3 (ENSCARG00000016363)	FAXC (ENSCARG00000016372)	fbxl4 (ENSCARG00000016376)	pou3f2b (ENSCARG00000016383)	mms22l (ENSCARG00000016401)	klhl32 (ENSCARG00000016441)	calhm6 (ENSCARG00000014063) ##20	CALHM5 (ENSCARG00000014068) ##20	rwdd1 (ENSCARG00000014073)	zufsp (ENSCARG00000014098)	kpna5 (ENSCARG00000014123)	gprc6a (ENSCARG00000014230)	ENSCARG00000014237	cnot3a (ENSCARG00000014261)	ENSCARG00000014333	TMC4 (ENSCARG00000014344)	mboat7 (ENSCARG00000014367)	gstk4 (ENSCARG00000014381)	ENSCARG00000014422	styk1b (ENSCARG00000014432)	phc1 (ENSCARG00000014447)	ENSCARG00000014469
Cyprininae_a	ANCESTRAL SPECIES	7	ENSGT00950000183068.b.c.a.b.a	ENSGT00390000000155.b.b.b	ENSGT00950000183134.c.a.b.e	ENSGT00940000154272.A.b	ENSGT00940000160200.e	ENSGT00940000164536.a.b.c	ENSGT00940000163155.f	ENSGT00940000157719.c	ENSGT00730000111138.b	ENSGT00390000007284.c	ENSGT00950000182919.A.p.g.a.b	ENSGT00940000155184.i	ENSGT00940000162208.`c.a.d	ENSGT00390000011769.b	ENSGT00940000157179.a	ENSGT01030000234610.a.a.db ##20	ENSGT01030000234610.a.b.j ##20	ENSGT00390000009168.d	ENSGT00940000156772.a.a	ENSGT00940000166924.c	ENSGT01050000244950.a.a.b.g	ENSGT00940000158416.q.a.b	ENSGT00940000161197.g	ENSGT00390000014743.j.a	ENSGT00550000075069.m	ENSGT00940000154244.B.f	ENSGT00510000048131.t	ENSGT00940000154244.B.e	ENSGT01050000244894.a.a.a.a.d	ENSGT01030000234564.a.b.m	ENSGT00440000033697.bb.a.b
Common carp reference	MODERN SPECIES	47	cnr2 (ENSCCRG00000055283)	ENSCCRG00000006887	SNAP91 (ENSCCRG00000071478)	prss35 (ENSCCRG00000003447)	ME1 (ENSCCRG00000003468)	usp45 (ENSCCRG00000064928)	ENSCCRG00000047397	ENSCCRG00000080709	pnisr (ENSCCRG00000011870)	coq3 (ENSCCRG00000011832)	FAXC (ENSCCRG00000011835)	fbxl4 (ENSCCRG00000023871)	pou3f2b (ENSCCRG00000063906)	mms22l (ENSCCRG00000054586)	klhl32 (ENSCCRG00000009098)	calhm6 (ENSCCRG00000058883) ##20	CALHM5 (ENSCCRG00000064134) ##20	rwdd1 (ENSCCRG00000057387)	ENSCCRG00000080219	zufsp (ENSCCRG00000011741)	kpna5 (ENSCCRG00000009259)	gprc6a (ENSCCRG00000011717)	ENSCCRG00000054359	cnot3a (ENSCCRG00000042028)	prpf31 (ENSCCRG00000009069)	ENSCCRG00000073669	TMC4 (ENSCCRG00000055866)	mboat7 (ENSCCRG00000041961)	ENSCCRG00000067077	ENSCCRG00000041955	ENSCCRG00000041943
Cyprininae	ANCESTRAL SPECIES	317							ENSGT00940000164601	ENSGT00940000157719.d	ENSGT00730000111138.a	ENSGT00390000007284.d	ENSGT00950000182919.A.p.g.a.a	ENSGT00940000155184.j	ENSGT00940000162208.`c.a.c	ENSGT00390000011769.a	ENSGT00940000157179.b	ENSGT01030000234610.a.a.eb ##20	ENSGT01030000234610.a.b.i ##20	ENSGT00390000009168.c	ENSGT00940000156772.a.b	ENSGT00940000166924.d	ENSGT01050000244950.a.a.b.h	ENSGT00940000158416.q.a.a	ENSGT00940000161197.h	ENSGT00390000014743.j.b	ENSGT00550000075069.n	ENSGT00940000154244.B	ENSGT00510000048131	ENSGT01050000244894.a.a.a.a.c	ENSGT01030000234564.a.b.n	ENSGT00440000033697.bb.a.a	ENSGT00940000157871.h.a.b
Cyprininae_a	ANCESTRAL SPECIES	165	ENSGT00950000183068.b.c.a.b.b	ENSGT00390000000155.b.b.a	ENSGT00950000183134.c.a.b.f.a	ENSGT00940000154272.A.a	ENSGT00940000160200.f	ENSGT00940000164536.a.b.d	ENSGT00940000163155.e	ENSGT00940000157719.d	ENSGT00730000111138.a	ENSGT00390000007284.d	ENSGT00950000182919.A.p.g.a.a	ENSGT00940000155184.j	ENSGT00940000162208.`c.a.c	ENSGT00390000011769.a	ENSGT00940000157179.b	ENSGT01030000234610.a.a.eb ##20	ENSGT01030000234610.a.b.i ##20	ENSGT00390000009168.c	ENSGT00940000156772.a.b	ENSGT00940000166924.d	ENSGT01050000244950.a.a.b.h	ENSGT00940000158416.q.a.a	ENSGT00940000161197.h	ENSGT00390000014743.j.b	ENSGT00550000075069.n	ENSGT00510000048131.s	ENSGT01050000244894.a.a.a.a.c	ENSGT01030000234564.a.b.n	ENSGT00440000033697.bb.a.a	ENSGT00940000157871.h.a.b	ENSGT00940000165997.b.b
Golden-line barbel	MODERN SPECIES	458							prdm13 (ENSSGRG00000012496)	tstd3 (ENSSGRG00000012497)	usp45 (ENSSGRG00000012504)	pnisr (ENSSGRG00000012745)	FAXC (ENSSGRG00000012874)	fbxl4 (ENSSGRG00000012875)	pou3f2b (ENSSGRG00000012899)	mms22l (ENSSGRG00000012902)	klhl32 (ENSSGRG00000012946)	calhm6 (ENSSGRG00000012948) ##20	CALHM5 (ENSSGRG00000012949) ##20	rwdd1 (ENSSGRG00000012954)	ENSSGRG00000012991	zufsp (ENSSGRG00000013106)	kpna5 (ENSSGRG00000013114)	gprc6a (ENSSGRG00000013192)	ENSSGRG00000013193	cnot3a (ENSSGRG00000013205)	prpf31 (ENSSGRG00000013852)	ENSSGRG00000014113	leng1 (ENSSGRG00000014114)	ENSSGRG00000014116	mboat7 (ENSSGRG00000014119)	ENSSGRG00000014120	ENSSGRG00000014161
Common carp reference	MODERN SPECIES	2	SNAP91 (ENSCCRG00000006895)	prss35 (ENSCCRG00000055832)	ME1 (ENSCCRG00000077509)	ENSCCRG00000003478	ENSCCRG00000011754	prdm13 (ENSCCRG00000013788)	zgc:172323 (ENSCCRG00000011751)	usp45 (ENSCCRG00000011767)	pnisr (ENSCCRG00000011822)	coq3 (ENSCCRG00000071542)	fbxl4 (ENSCCRG00000017447)	pou3f2b (ENSCCRG00000055463)	ENSCCRG00000005004	mms22l (ENSCCRG00000065849)	klhl32 (ENSCCRG00000054058)	calhm6 (ENSCCRG00000009209) ##20	CALHM5 (ENSCCRG00000078067) ##20	rwdd1 (ENSCCRG00000009199)	zufsp (ENSCCRG00000009225)	kpna5 (ENSCCRG00000008058)	gprc6a (ENSCCRG00000076189)	ENSCCRG00000055659	cnot3a (ENSCCRG00000009050)	prpf31 (ENSCCRG00000051591)	ENSCCRG00000074216	leng1 (ENSCCRG00000066909)	ENSCCRG00000033289	mboat7 (ENSCCRG00000033279)	ENSCCRG00000033267	styk1b (ENSCCRG00000041931)	phc1 (ENSCCRG00000041922)
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	612												fbxl4 (ENSCARG00000059039)	pou3f2b (ENSCARG00000059031)	ENSCARG00000059023	klhl32 (ENSCARG00000058939)	calhm6 (ENSCARG00000058920) ##20	CALHM5 (ENSCARG00000058893) ##20	rwdd1 (ENSCARG00000058873)	ENSCARG00000058864	zufsp (ENSCARG00000058820)	kpna5 (ENSCARG00000058527)	gprc6a (ENSCARG00000058497)	ENSCARG00000058491	ENSCARG00000058442
Goldfish	MODERN SPECIES	2052														ENSCARG00000062811	klhl32 (ENSCARG00000062722)	calhm6 (ENSCARG00000062710) ##20	CALHM5 (ENSCARG00000062697) ##20
Zebrafish	MODERN SPECIES	7	SNAP91 (ENSDARG00000098809)	prss35 (ENSDARG00000100691)	me1 (ENSDARG00000053215)	MCHR2 (ENSDARG00000007842)	prdm13 (ENSDARG00000078701)	zgc:172323 (ENSDARG00000053201)	tstd3 (ENSDARG00000087048)	usp45 (ENSDARG00000075013)	pnisr (ENSDARG00000069855)	coq3 (ENSDARG00000069857)	FAXC (ENSDARG00000078981)	fbxl4 (ENSDARG00000026941)	pou3f2b (ENSDARG00000076262)	mms22l (ENSDARG00000074691)	klhl32 (ENSDARG00000003576)	calhm6 (ENSDARG00000041980) ##20	calhm5.1 (ENSDARG00000074947) ##20	CALHM5 (ENSDARG00000012726) ##20	rwdd1 (ENSDARG00000015930)	zufsp (ENSDARG00000059983)	kpna5 (ENSDARG00000042030)	gprc6a (ENSDARG00000005371)	ENSDARG00000069893	cnot3a (ENSDARG00000007135)	ENSDARG00000092180	prpf31 (ENSDARG00000095904)	ENSDARG00000029114	leng1 (ENSDARG00000037633)	ENSDARG00000031757	mboat7 (ENSDARG00000033436)	gstk1 (ENSDARG00000056510)
Clupeiformes	ANCESTRAL SPECIES		ENSGT00950000183068.b.c.a	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.b	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	2	ube3d (ENSCHAG00000019056)	me1 (ENSCHAG00000002474)	MCHR2 (ENSCHAG00000004493)	prdm13 (ENSCHAG00000004551)	zgc:172323 (ENSCHAG00000004564)	tstd3 (ENSCHAG00000004658)	usp45 (ENSCHAG00000004725)	pnisr (ENSCHAG00000006215)	coq3 (ENSCHAG00000006234)	FAXC (ENSCHAG00000006246)	fbxl4 (ENSCHAG00000006254)	ENSCHAG00000006269	ENSCHAG00000006309	mms22l (ENSCHAG00000006360)	klhl32 (ENSCHAG00000006812)	calhm6 (ENSCHAG00000006923) ##20	calhm6 (ENSCHAG00000007009) ##20	calhm6 (ENSCHAG00000007024) ##20	calhm6 (ENSCHAG00000007053) ##20	calhm5.1 (ENSCHAG00000007071) ##20	rwdd1 (ENSCHAG00000007081)	ENSCHAG00000007111	zufsp (ENSCHAG00000007261)	kpna5 (ENSCHAG00000007315)	gprc6a (ENSCHAG00000008145)	vegfaa (ENSCHAG00000008285)	NAGA (ENSCHAG00000008324)	ENSCHAG00000008588	ENSCHAG00000008602	ENSCHAG00000008624	ENSCHAG00000008662
Atlantic herring	MODERN SPECIES	2	MCHR2 (ENSCHAG00000004493)	prdm13 (ENSCHAG00000004551)	zgc:172323 (ENSCHAG00000004564)	tstd3 (ENSCHAG00000004658)	usp45 (ENSCHAG00000004725)	pnisr (ENSCHAG00000006215)	coq3 (ENSCHAG00000006234)	FAXC (ENSCHAG00000006246)	fbxl4 (ENSCHAG00000006254)	ENSCHAG00000006269	ENSCHAG00000006309	mms22l (ENSCHAG00000006360)	klhl32 (ENSCHAG00000006812)	calhm6 (ENSCHAG00000006923) ##20	calhm6 (ENSCHAG00000007009) ##20	calhm6 (ENSCHAG00000007024) ##20	calhm6 (ENSCHAG00000007053) ##20	calhm5.1 (ENSCHAG00000007071) ##20	rwdd1 (ENSCHAG00000007081)	ENSCHAG00000007111	zufsp (ENSCHAG00000007261)	kpna5 (ENSCHAG00000007315)	gprc6a (ENSCHAG00000008145)	vegfaa (ENSCHAG00000008285)	NAGA (ENSCHAG00000008324)	ENSCHAG00000008588	ENSCHAG00000008602	ENSCHAG00000008624	ENSCHAG00000008662	ENSCHAG00000008686	ENSCHAG00000008732
Atlantic herring	MODERN SPECIES	2	me1 (ENSCHAG00000002474)	MCHR2 (ENSCHAG00000004493)	prdm13 (ENSCHAG00000004551)	zgc:172323 (ENSCHAG00000004564)	tstd3 (ENSCHAG00000004658)	usp45 (ENSCHAG00000004725)	pnisr (ENSCHAG00000006215)	coq3 (ENSCHAG00000006234)	FAXC (ENSCHAG00000006246)	fbxl4 (ENSCHAG00000006254)	ENSCHAG00000006269	ENSCHAG00000006309	mms22l (ENSCHAG00000006360)	klhl32 (ENSCHAG00000006812)	calhm6 (ENSCHAG00000006923) ##20	calhm6 (ENSCHAG00000007009) ##20	calhm6 (ENSCHAG00000007024) ##20	calhm6 (ENSCHAG00000007053) ##20	calhm5.1 (ENSCHAG00000007071) ##20	rwdd1 (ENSCHAG00000007081)	ENSCHAG00000007111	zufsp (ENSCHAG00000007261)	kpna5 (ENSCHAG00000007315)	gprc6a (ENSCHAG00000008145)	vegfaa (ENSCHAG00000008285)	NAGA (ENSCHAG00000008324)	ENSCHAG00000008588	ENSCHAG00000008602	ENSCHAG00000008624	ENSCHAG00000008662	ENSCHAG00000008686
Atlantic herring	MODERN SPECIES	2	prdm13 (ENSCHAG00000004551)	zgc:172323 (ENSCHAG00000004564)	tstd3 (ENSCHAG00000004658)	usp45 (ENSCHAG00000004725)	pnisr (ENSCHAG00000006215)	coq3 (ENSCHAG00000006234)	FAXC (ENSCHAG00000006246)	fbxl4 (ENSCHAG00000006254)	ENSCHAG00000006269	ENSCHAG00000006309	mms22l (ENSCHAG00000006360)	klhl32 (ENSCHAG00000006812)	calhm6 (ENSCHAG00000006923) ##20	calhm6 (ENSCHAG00000007009) ##20	calhm6 (ENSCHAG00000007024) ##20	calhm6 (ENSCHAG00000007053) ##20	calhm5.1 (ENSCHAG00000007071) ##20	rwdd1 (ENSCHAG00000007081)	ENSCHAG00000007111	zufsp (ENSCHAG00000007261)	kpna5 (ENSCHAG00000007315)	gprc6a (ENSCHAG00000008145)	vegfaa (ENSCHAG00000008285)	NAGA (ENSCHAG00000008324)	ENSCHAG00000008588	ENSCHAG00000008602	ENSCHAG00000008624	ENSCHAG00000008662	ENSCHAG00000008686	ENSCHAG00000008732	lyplal1 (ENSCHAG00000008841)
Osteoglossiformes	ANCESTRAL SPECIES	130	ENSGT00390000000155.b.a.b	ENSGT00950000183134.c.a.b	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000164385.a.b	ENSGT00940000164385.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00950000182834.B	ENSGT00940000153634.b.b.b	ENSGT00390000018031	ENSGT00940000159171
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	135	ENSPKIG00000022778	PRSS35 (ENSPKIG00000022787)	me1 (ENSPKIG00000022798)	prdm13 (ENSPKIG00000022824)	zgc:172323 (ENSPKIG00000022840)	tstd3 (ENSPKIG00000022851)	usp45 (ENSPKIG00000022877)	ENSPKIG00000022936	coq3 (ENSPKIG00000022973)	FAXC (ENSPKIG00000022985)	fbxl4 (ENSPKIG00000022995)	ENSPKIG00000023016	mms22l (ENSPKIG00000025598)	klhl32 (ENSPKIG00000025636)	calhm6 (ENSPKIG00000025629) ##20	calhm6 (ENSPKIG00000025663) ##20	calhm5.1 (ENSPKIG00000025628) ##20	rwdd1 (ENSPKIG00000025660)	ENSPKIG00000025625	zufsp (ENSPKIG00000025593)	kpna5 (ENSPKIG00000025689)	vegfaa (ENSPKIG00000025613)	CNIH4 (ENSPKIG00000025684)	wdr26b (ENSPKIG00000000004)	rrp15 (ENSPKIG00000000018)	ENSPKIG00000000025	ENSPKIG00000000033	etfb (ENSPKIG00000000040)	USF2 (ENSPKIG00000000057)	ENSPKIG00000000073	iglon5 (ENSPKIG00000000081)
P. kingsleyae	MODERN SPECIES	135	ENSPKIG00000022758	ENSPKIG00000022778	PRSS35 (ENSPKIG00000022787)	me1 (ENSPKIG00000022798)	prdm13 (ENSPKIG00000022824)	zgc:172323 (ENSPKIG00000022840)	tstd3 (ENSPKIG00000022851)	usp45 (ENSPKIG00000022877)	ENSPKIG00000022936	coq3 (ENSPKIG00000022973)	FAXC (ENSPKIG00000022985)	fbxl4 (ENSPKIG00000022995)	ENSPKIG00000023016	mms22l (ENSPKIG00000025598)	klhl32 (ENSPKIG00000025636)	calhm6 (ENSPKIG00000025629) ##20	calhm6 (ENSPKIG00000025663) ##20	calhm5.1 (ENSPKIG00000025628) ##20	rwdd1 (ENSPKIG00000025660)	ENSPKIG00000025625	zufsp (ENSPKIG00000025593)	kpna5 (ENSPKIG00000025689)	vegfaa (ENSPKIG00000025613)	CNIH4 (ENSPKIG00000025684)	wdr26b (ENSPKIG00000000004)	rrp15 (ENSPKIG00000000018)	ENSPKIG00000000025	ENSPKIG00000000033	etfb (ENSPKIG00000000040)	USF2 (ENSPKIG00000000057)	ENSPKIG00000000073
Asian bonytongue	MODERN SPECIES	23	SNAP91 (ENSSFOG00015030740)	PRSS35 (ENSSFOG00015011467)	me1 (ENSSFOG00015011400)	prdm13 (ENSSFOG00015011389)	zgc:172323 (ENSSFOG00015011336)	tstd3 (ENSSFOG00015011325)	usp45 (ENSSFOG00015011314)	pnisr (ENSSFOG00015011276)	coq3 (ENSSFOG00015011267)	FAXC (ENSSFOG00015024969)	fbxl4 (ENSSFOG00015011222)	ENSSFOG00015027357	ENSSFOG00015011201	mms22l (ENSSFOG00015011179)	klhl32 (ENSSFOG00015011149)	calhm6 (ENSSFOG00015031263) ##20	calhm5.1 (ENSSFOG00015011119) ##20	rwdd1 (ENSSFOG00015011093)	zufsp (ENSSFOG00015028204)	ENSSFOG00015029312	rwdd1 (ENSSFOG00015026615)	ENSSFOG00015027676	zufsp (ENSSFOG00015025959)	kpna5 (ENSSFOG00015011018)	gprc6a (ENSSFOG00015010941)	vegfaa (ENSSFOG00015010876)	CNIH4 (ENSSFOG00015029508)	wdr26b (ENSSFOG00015010778)	preb (ENSSFOG00015010702)	lyplal1 (ENSSFOG00015010749)	ENSSFOG00015031838
Spotted gar	MODERN SPECIES	647	RWDD2A (ENSLOCG00000017081)	MCHR2 (ENSLOCG00000017082)	prdm13 (ENSLOCG00000017084)	ngs (ENSLOCG00000017085)	ccnc (ENSLOCG00000017086)	tstd3 (ENSLOCG00000017087)	usp45 (ENSLOCG00000017089)	ENSLOCG00000017090	coq3 (ENSLOCG00000017096)	FAXC (ENSLOCG00000017097)	fbxl4 (ENSLOCG00000017099)	pou3f2b (ENSLOCG00000017875)	ENSLOCG00000017102	mms22l (ENSLOCG00000017105)	klhl32 (ENSLOCG00000017108)	calhm6 (ENSLOCG00000017112) ##20	calhm5.1 (ENSLOCG00000017113) ##20	rwdd1 (ENSLOCG00000017114)	ENSLOCG00000017120	ENSLOCG00000017122	ENSLOCG00000017124	ZUP1 (ENSLOCG00000017125)	kpna5 (ENSLOCG00000017126)	FAM162B (ENSLOCG00000017127)	ENSLOCG00000017128	gprc6a (ENSLOCG00000017129)	ENSLOCG00000017131	rfx6 (ENSLOCG00000017133)	vgll2a (ENSLOCG00000017136)	ROS1 (ENSLOCG00000017138)	dcbld1 (ENSLOCG00000017143)
Reedfish	MODERN SPECIES	11	MCHR2 (ENSECRG00000004146)	prdm13 (ENSECRG00000004135)	ngs (ENSECRG00000004123)	ccnc (ENSECRG00000004082)	ENSECRG00000004062	usp45 (ENSECRG00000003823)	ENSECRG00000003775	coq3 (ENSECRG00000003756)	FAXC (ENSECRG00000003750)	fbxl4 (ENSECRG00000003742)	pou3f2b (ENSECRG00000003737)	ENSECRG00000003733	ENSECRG00000003729	mms22l (ENSECRG00000003698)	klhl32 (ENSECRG00000003614)	calhm6 (ENSECRG00000003558) ##20	calhm5.1 (ENSECRG00000003548) ##20	CALHM4 (ENSECRG00000003540) ##20	rwdd1 (ENSECRG00000003523)	ENSECRG00000003509	ENSECRG00000003501	ENSECRG00000003481	ENSECRG00000003462	ZUP1 (ENSECRG00000003431)	kpna5 (ENSECRG00000003395)	gprc6a (ENSECRG00000003356)	ENSECRG00000003254	ENSECRG00000003214	ENSECRG00000003202	ENSECRG00000003119	rfx6 (ENSECRG00000003016)
Elephant shark	MODERN SPECIES	1556	ENSCMIG00000006280	vgll2a (ENSCMIG00000006277)	rfx6 (ENSCMIG00000006276)	CCN6 (ENSCMIG00000006259)	tube1 (ENSCMIG00000006239)	ENSCMIG00000006232	LAMA4 (ENSCMIG00000005945)	marcksa (ENSCMIG00000005799)	ENSCMIG00000004990	HS3ST5 (ENSCMIG00000004787)	ENSCMIG00000004784	ENSCMIG00000004781	ENSCMIG00000004696	nt5dc1 (ENSCMIG00000004627)	dse (ENSCMIG00000004605)	calhm6 (ENSCMIG00000004602) ##20	ENSCMIG00000004589	CALHM4 (ENSCMIG00000004572) ##20	rwdd1 (ENSCMIG00000004566)	ENSCMIG00000004561	ENSCMIG00000004556	ENSCMIG00000004541
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.a.b ##20
Euteleostomi	ANCESTRAL SPECIES	11	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Actinopterygii	ANCESTRAL SPECIES	39	ENSGT00390000007224.a	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536	ENSGT00940000155625	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A	ENSGT00940000155184	ENSGT00940000162208	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000156772.b	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Neopterygii	ANCESTRAL SPECIES	5	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536	ENSGT00940000155625	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A	ENSGT00940000155184	ENSGT00940000162208	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000156772.b.d	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000089228
Osteoglossocephalai	ANCESTRAL SPECIES	61	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a
Clupeocephala	ANCESTRAL SPECIES	48	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT00390000017627.a.a.b
Euteleosteomorpha	ANCESTRAL SPECIES	58	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155.g	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT00390000017627.a.a.b
Acanthomorphata	ANCESTRAL SPECIES	145															ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT01000000214440.A.a.b.a.g.b.b
Euacanthomorphacea	ANCESTRAL SPECIES	28	ENSGT00940000177120	ENSGT00940000166468	ENSGT00390000003774.a.a.d	ENSGT00940000157616.j.b	ENSGT00940000159356.a.a	ENSGT01030000234871	ENSGT00940000160839	ENSGT00950000183051.a.a.b	ENSGT00940000182276	ENSGT00920000149172	ENSGT00940000156446	ENSGT00940000160484	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT01000000214440.A.a.b.a.g.b.b
Percomorphaceae	ANCESTRAL SPECIES		ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Percomorphaceae_B	ANCESTRAL SPECIES	1	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Percomorphaceae_C	ANCESTRAL SPECIES	2	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Percomorphaceae_D	ANCESTRAL SPECIES	2	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Carangaria	ANCESTRAL SPECIES	1	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT00940000155488.m.b
Carangaria_A	ANCESTRAL SPECIES	9	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b	ENSGT00940000155488.m.b
Seriola	ANCESTRAL SPECIES	16			ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00940000179751	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b	ENSGT00940000155488.m.b
Greater amberjack	MODERN SPECIES	75	ENSSDUG00000003805	ENSSDUG00000004008	rbm42 (ENSSDUG00000004033)	ppox (ENSSDUG00000004056)	dyrk1b (ENSSDUG00000004069)	fbl (ENSSDUG00000004103)	sacm1lb (ENSSDUG00000004126)	SLC6A20 (ENSSDUG00000004173)	ggctb (ENSSDUG00000004209)	ENSSDUG00000004218	ENSSDUG00000004245	gpd1l (ENSSDUG00000004259)	TCAIM (ENSSDUG00000004290)	cnot10 (ENSSDUG00000004317)	calhm6 (ENSSDUG00000004440) ##20	calhm5.1 (ENSSDUG00000004451) ##20	rwdd1 (ENSSDUG00000004476)	ENSSDUG00000004503	zufsp (ENSSDUG00000004517)	kpna5 (ENSSDUG00000004538)	gprc6a (ENSSDUG00000004586)	CNIH4 (ENSSDUG00000004700)	WDR26 (ENSSDUG00000004745)	ADCY3 (ENSSDUG00000004785)	preb (ENSSDUG00000004853)	tgfb2 (ENSSDUG00000004888)	rrp15 (ENSSDUG00000004910)	NAGA (ENSSDUG00000004921)	vegfaa (ENSSDUG00000004942)	ENSSDUG00000004957	stt3b (ENSSDUG00000004985)
Yellowtail amberjack	MODERN SPECIES	2975	ENSSLDG00000009741	ENSSLDG00000009762	aldh2.2 (ENSSLDG00000009818)	rbm42 (ENSSLDG00000009918)	ppox (ENSSLDG00000009988)	dyrk1b (ENSSLDG00000010032)	fbl (ENSSLDG00000010053)	sacm1lb (ENSSLDG00000010095)	SLC6A20 (ENSSLDG00000010198)	ggctb (ENSSLDG00000010234)	OSBPL10 (ENSSLDG00000010256)	gpd1l (ENSSLDG00000010319)	TCAIM (ENSSLDG00000010350)	cnot10 (ENSSLDG00000010377)	calhm6 (ENSSLDG00000010452) ##20	calhm5.1 (ENSSLDG00000010468) ##20	rwdd1 (ENSSLDG00000010483)	ENSSLDG00000010508	zufsp (ENSSLDG00000010539)	kpna5 (ENSSLDG00000010571)	ENSSLDG00000010613	gprc6a (ENSSLDG00000010682)	CNIH4 (ENSSLDG00000010752)	WDR26 (ENSSLDG00000010784)	ADCY3 (ENSSLDG00000010852)	preb (ENSSLDG00000010905)	tgfb2 (ENSSLDG00000010932)	rrp15 (ENSSLDG00000010964)	NAGA (ENSSLDG00000010993)	vegfaa (ENSSLDG00000011029)	ENSSLDG00000011053
Barramundi perch	MODERN SPECIES	103															calhm6 (ENSLCAG00010017477) ##20	calhm5.1 (ENSLCAG00010017479) ##20	rwdd1 (ENSLCAG00010017483)	ENSLCAG00010017502	zufsp (ENSLCAG00010017506)	kpna5 (ENSLCAG00010017519)	popdc3 (ENSLCAG00010017540)	bves (ENSLCAG00010017545)	HACE1 (ENSLCAG00010017559)	GRIK2 (ENSLCAG00010017653)	ASCC3 (ENSLCAG00010018250)	sim1a (ENSLCAG00010018664)	cyb5r4 (ENSLCAG00010018673)	cep162 (ENSLCAG00010018688)	ENSLCAG00010018723	ADGRB1 (ENSLCAG00010018819)	ENSLCAG00010019070
Pleuronectoidei	ANCESTRAL SPECIES	36	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Turbot	MODERN SPECIES	7	ENSSMAG00000016914	sema6e (ENSSMAG00000016948)	ENSSMAG00000021944	PTPN23 (ENSSMAG00000017174)	SCAP (ENSSMAG00000017240)	ELP6 (ENSSMAG00000031965)	CSPG5 (ENSSMAG00000017336)	ENSSMAG00000017348	ENSSMAG00000017386	ENSSMAG00000017443	ENSSMAG00000017496	ENSSMAG00000017503	ENSSMAG00000017579	ENSSMAG00000017585	calhm6 (ENSSMAG00000017638) ##20	calhm5.1 (ENSSMAG00000017645) ##20	rwdd1 (ENSSMAG00000017649)	ENSSMAG00000017681	zufsp (ENSSMAG00000017689)	kpna5 (ENSSMAG00000017718)	ENSSMAG00000024541	ENSSMAG00000035983	ENSSMAG00000024704	ENSSMAG00000017770	CD83 (ENSSMAG00000017800)	ENSSMAG00000023524	ENSSMAG00000023851	ENSSMAG00000017838	ENSSMAG00000017850	ENSSMAG00000017869	nagpa (ENSSMAG00000017877)
Tongue sole	MODERN SPECIES	4	ENSCSEG00000010234	aldh2.2 (ENSCSEG00000010239)	rbm42 (ENSCSEG00000010248)	ppox (ENSCSEG00000010271)	dyrk1b (ENSCSEG00000010296)	fbl (ENSCSEG00000010310)	ENSCSEG00000010317	sacm1lb (ENSCSEG00000010329)	SLC6A20 (ENSCSEG00000010363)	ggctb (ENSCSEG00000010421)	OSBPL10 (ENSCSEG00000010428)	gpd1l (ENSCSEG00000010444)	TCAIM (ENSCSEG00000010455)	cnot10 (ENSCSEG00000010464)	calhm6 (ENSCSEG00000010501) ##20	calhm5.1 (ENSCSEG00000010502) ##20	rwdd1 (ENSCSEG00000010516)	ENSCSEG00000010526	zufsp (ENSCSEG00000010533)	kpna5 (ENSCSEG00000010542)	gprc6a (ENSCSEG00000010562)	CNIH4 (ENSCSEG00000010566)	WDR26 (ENSCSEG00000010580)	ADCY3 (ENSCSEG00000010609)	preb (ENSCSEG00000010634)	ENSCSEG00000010647	lyplal1 (ENSCSEG00000010651)	tgfb2 (ENSCSEG00000010667)	rrp15 (ENSCSEG00000010675)	NAGA (ENSCSEG00000010678)	vegfaa (ENSCSEG00000010702)
Anabantaria	ANCESTRAL SPECIES	2	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT00390000002563.b.a.a
Anabantoidei	ANCESTRAL SPECIES	3	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000157390	ENSGT00390000001960	ENSGT00940000157284.cb.a
Siamese fighting fish	DUPLICATION
Siamese fighting fish	MODERN SPECIES	7	pomgnt2 (ENSBSLG00000022709)	ENSBSLG00000022711	GASK1A (ENSBSLG00000022713)	ENSBSLG00000022801	vegfaa (ENSBSLG00000022835)	rrp15 (ENSBSLG00000022863)	tgfb2 (ENSBSLG00000022875)	ENSBSLG00000022909	preb (ENSBSLG00000022913)	ADCY3 (ENSBSLG00000022966)	ENSBSLG00000023135	ENSBSLG00000023139	TCAIM (ENSBSLG00000023150)	cnot10 (ENSBSLG00000023196)	calhm6 (ENSBSLG00000023333) ##20	CALHM5 (ENSBSLG00000023335) ##20	rwdd1 (ENSBSLG00000023336)	ENSBSLG00000023343	zufsp (ENSBSLG00000023374)	kpna5 (ENSBSLG00000023388)	gprc6a (ENSBSLG00000023802)	CNIH4 (ENSBSLG00000023844)	WDR26 (ENSBSLG00000023890)	ENSBSLG00000024021	fbl (ENSBSLG00000024023)	dyrk1b (ENSBSLG00000024050)	ppox (ENSBSLG00000024116)	rbm42 (ENSBSLG00000024162)	aldh2.2 (ENSBSLG00000024255)	bves (ENSBSLG00000025401)	popdc3 (ENSBSLG00000025419)
Siamese fighting fish	MODERN SPECIES	3	RASGRF2 (ENSBSLG00000009270)	ckmt2a (ENSBSLG00000008866)	ENSBSLG00000008859	ENSBSLG00000008843	ENSBSLG00000007941	ENSBSLG00000007162	CNNM4 (ENSBSLG00000006739)	CNNM3 (ENSBSLG00000006460)	il1b (ENSBSLG00000006363)	PURB (ENSBSLG00000006318)	ved (ENSBSLG00000006280)	polm (ENSBSLG00000006157)	mrps24 (ENSBSLG00000006130)	nudcd3 (ENSBSLG00000006128)	CAMK2B (ENSBSLG00000005551)	CALHM5 (ENSBSLG00000005345) ##20	ppp6c (ENSBSLG00000005267)	smarcb1b (ENSBSLG00000004862)	derl2 (ENSBSLG00000004344)	lmnb1 (ENSBSLG00000004213)	prrc1 (ENSBSLG00000004190)	SLC27A3 (ENSBSLG00000004125)	sptlc1 (ENSBSLG00000003798)	ROR2 (ENSBSLG00000003188)	nfil3 (ENSBSLG00000003187)	auh (ENSBSLG00000003173)	syk (ENSBSLG00000003159)	chd1 (ENSBSLG00000002913)	dcp2 (ENSBSLG00000002848)	ENSBSLG00000002836	ENSBSLG00000002815
Climbing perch	MODERN SPECIES	7	ENSATEG00000025304	ENSATEG00000000451	ENSATEG00000000485	ENSATEG00000000536	ENSATEG00000000542	ENSATEG00000030195	ENSATEG00000000569	ENSATEG00000000580	ENSATEG00000000670	ENSATEG00000000725	ENSATEG00000000730	ENSATEG00000000777	ENSATEG00000000824	ENSATEG00000000839	calhm6 (ENSATEG00000000854) ##20	calhm5.1 (ENSATEG00000000863) ##20	rwdd1 (ENSATEG00000000887)	ENSATEG00000000876	zufsp (ENSATEG00000000923)	kpna5 (ENSATEG00000000929)	gprc6a (ENSATEG00000000980)	ENSATEG00000001139	ENSATEG00000001152	ENSATEG00000001160	preb (ENSATEG00000001229)	ENSATEG00000001238	ENSATEG00000001249	ENSATEG00000001337
Zig-zag eel	MODERN SPECIES	86	ENSMAMG00000008015	ENSMAMG00000007997	ENSMAMG00000027629	ENSMAMG00000007988	ENSMAMG00000027055	ENSMAMG00000026241	ENSMAMG00000007928	ENSMAMG00000007874	ENSMAMG00000007853	ENSMAMG00000004666	ENSMAMG00000027646	ENSMAMG00000026397	ENSMAMG00000004495	ENSMAMG00000004485	ENSMAMG00000004482 ##20	ENSMAMG00000004445 ##20	ENSMAMG00000028533	ENSMAMG00000004296	ENSMAMG00000000002	ENSMAMG00000004243	ENSMAMG00000004234	ENSMAMG00000027757	ENSMAMG00000026212	ENSMAMG00000013526	ENSMAMG00000027715	ENSMAMG00000017571	ENSMAMG00000004152	ENSMAMG00000021178	ENSMAMG00000025734	ENSMAMG00000025458
Eupercaria	ANCESTRAL SPECIES	1	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Tetraodontidae	ANCESTRAL SPECIES	99												ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00940000157284.cb.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a
Fugu	MODERN SPECIES	19	rab5ab (ENSTRUG00000025111)	ENSTRUG00000009870	ENSTRUG00000009881	PLCL2 (ENSTRUG00000001554)	ENSTRUG00000021304	ENSTRUG00000003431	ENSTRUG00000003662	dtnbp1a (ENSTRUG00000003753)	fbl (ENSTRUG00000004408)	ENSTRUG00000024586	ppox (ENSTRUG00000005004)	SLC6A20 (ENSTRUG00000005349)	ggctb (ENSTRUG00000006044)	TCAIM (ENSTRUG00000006056)	cnot10 (ENSTRUG00000006110)	calhm5.1 (ENSTRUG00000006659) ##20	rwdd1 (ENSTRUG00000030520)	zufsp (ENSTRUG00000006918)	gprc6a (ENSTRUG00000007097)	CNIH4 (ENSTRUG00000007573)	WDR26 (ENSTRUG00000007586)	ADCY3 (ENSTRUG00000007837)	preb (ENSTRUG00000008113)	lyplal1 (ENSTRUG00000028287)	tgfb2 (ENSTRUG00000022457)	rrp15 (ENSTRUG00000008510)	vegfaa (ENSTRUG00000028504)	popdc3 (ENSTRUG00000022112)	bves (ENSTRUG00000008719)	GRIK2 (ENSTRUG00000009259)	GRIK2 (ENSTRUG00000033229)
Eupecaria_A	ANCESTRAL SPECIES	2	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Ballan wrasse	DUPLICATION
Ballan wrasse	MODERN SPECIES	4235																CALHM5 (ENSLBEG00000013693) ##20	rrp15 (ENSLBEG00000013707)
Ballan wrasse	MODERN SPECIES	711											gpd1l (ENSLBEG00000023925)	ENSLBEG00000023944	TCAIM (ENSLBEG00000023968)	cnot10 (ENSLBEG00000024011)	calhm6 (ENSLBEG00000024047) ##20	CALHM5 (ENSLBEG00000024079) ##20	rrp15 (ENSLBEG00000024092)	NAGA (ENSLBEG00000024099)	vegfaa (ENSLBEG00000024128)
Eupecaria_B	ANCESTRAL SPECIES	4	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Perciformes	ANCESTRAL SPECIES	3	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT00940000165015	ENSGT00390000016277.a.k	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000160695	ENSGT00420000029769.a	ENSGT00940000157527.a	ENSGT00940000156938.e.f	ENSGT00940000155488.m.b	ENSGT00390000001296	ENSGT00390000012690.a	ENSGT00940000155721.b.b
Cottioidei	ANCESTRAL SPECIES	29	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT00940000165015	ENSGT00390000016277.a.k	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000160695	ENSGT00420000029769.a	ENSGT00940000157527.a	ENSGT00940000156938.e.f	ENSGT00940000155488.m.b	ENSGT00390000001296	ENSGT00390000012690.a	ENSGT00940000155721.b.b
Lumpfish	MODERN SPECIES	17	ENSCLMG00005013469	ENSCLMG00005013468	ENSCLMG00005013093	ggctb (ENSCLMG00005013062)	SLC6A20 (ENSCLMG00005013060)	sacm1lb (ENSCLMG00005013058)	fbl (ENSCLMG00005013056)	dyrk1b (ENSCLMG00005012892)	ppox (ENSCLMG00005012772)	rbm42 (ENSCLMG00005012765)	ALDH2 (ENSCLMG00005010723)	OSBPL10 (ENSCLMG00005010697)	gpd1l (ENSCLMG00005010695)	TCAIM (ENSCLMG00005010692)	cnot10 (ENSCLMG00005009351)	calhm5.1 (ENSCLMG00005009340) ##20	rwdd1 (ENSCLMG00005009338)	zufsp (ENSCLMG00005009336)	cndp1 (ENSCLMG00005009334)	ABHD5 (ENSCLMG00005009332)	ano10a (ENSCLMG00005008348)	snrka (ENSCLMG00005008336)	pomgnt2 (ENSCLMG00005008333)	GASK1A (ENSCLMG00005008331)	TGFBR2 (ENSCLMG00005008090)	stt3b (ENSCLMG00005006716)	zgc:77056 (ENSCLMG00005006706)	tmem42a (ENSCLMG00005006705)	zdhhc3a (ENSCLMG00005006704)	mc2r (ENSCLMG00005006701)	mc5rb (ENSCLMG00005006650)
Stickleback	MODERN SPECIES	19	dtnbp1a (ENSGACG00000003983)	ENSGACG00000004007	ENSGACG00000004012	aldh2.2 (ENSGACG00000004015)	rbm42 (ENSGACG00000004170)	ppox (ENSGACG00000004180)	dyrk1b (ENSGACG00000004191)	fbl (ENSGACG00000004194)	sacm1lb (ENSGACG00000004294)	SLC6A20 (ENSGACG00000004349)	OSBPL10 (ENSGACG00000004382)	gpd1l (ENSGACG00000004385)	TCAIM (ENSGACG00000004392)	cnot10 (ENSGACG00000004406)	calhm6 (ENSGACG00000004419) ##20	calhm5.1 (ENSGACG00000004425) ##20	riox2 (ENSGACG00000004429)	rwdd1 (ENSGACG00000004457)	ENSGACG00000004471	zufsp (ENSGACG00000004473)	ENSGACG00000004478	taf2 (ENSGACG00000004480)	enpp2 (ENSGACG00000004492)	NOD1 (ENSGACG00000004511)	ENSGACG00000004518	rnf144b (ENSGACG00000004550)	ENSGACG00000004577	atp6v1c1a (ENSGACG00000004615)	azin1a (ENSGACG00000004621)	KLF10 (ENSGACG00000004632)	ubr5 (ENSGACG00000004642)
Perciformes_a	ANCESTRAL SPECIES	38	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT00940000165015	ENSGT00390000016277.a.k	ENSGT00940000157537	ENSGT00940000155365.a.a	ENSGT00940000160695	ENSGT00420000029769.a	ENSGT00940000157527.a
Pike perch	MODERN SPECIES	40	ENSSLUG00000010679	aldh2.2 (ENSSLUG00000010879)	rbm42 (ENSSLUG00000017901)	ppox (ENSSLUG00000017916)	dyrk1b (ENSSLUG00000018006)	fbl (ENSSLUG00000018126)	sacm1lb (ENSSLUG00000018210)	ENSSLUG00000018313	SLC6A20 (ENSSLUG00000018316)	ggctb (ENSSLUG00000018325)	OSBPL10 (ENSSLUG00000018368)	gpd1l (ENSSLUG00000018408)	TCAIM (ENSSLUG00000018417)	cnot10 (ENSSLUG00000018488)	calhm6 (ENSSLUG00000020126) ##20	calhm5.1 (ENSSLUG00000020133) ##20	rwdd1 (ENSSLUG00000020137)	ENSSLUG00000020154	zufsp (ENSSLUG00000020155)	ENSSLUG00000020160	cndp1 (ENSSLUG00000020173)	ABHD5 (ENSSLUG00000020196)	ano10a (ENSSLUG00000020255)	snrka (ENSSLUG00000021199)	pomgnt2 (ENSSLUG00000021205)	GASK1A (ENSSLUG00000021207)	tgfbr2b (ENSSLUG00000021250)	zgc:77056 (ENSSLUG00000021838)	preb (ENSSLUG00000021845)	ADCY3 (ENSSLUG00000021885)	eny2 (ENSSLUG00000022061)
Channel bull blenny	MODERN SPECIES	7	cdk14 (ENSCGOG00000009990)	fzd1 (ENSCGOG00000010153)	ENSCGOG00000010154	NOD1 (ENSCGOG00000010163)	enpp2 (ENSCGOG00000010472)	taf2 (ENSCGOG00000012329)	ENSCGOG00000012902	dtnbp1a (ENSCGOG00000012933)	sacm1lb (ENSCGOG00000012946)	SLC6A20 (ENSCGOG00000013092)	OSBPL10 (ENSCGOG00000013125)	ENSCGOG00000013138	TCAIM (ENSCGOG00000013141)	cnot10 (ENSCGOG00000013180)	calhm6 (ENSCGOG00000014569) ##20	calhm5.1 (ENSCGOG00000014570) ##20
Eupecaria_C	ANCESTRAL SPECIES	2	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
Gilthead seabream	MODERN SPECIES	59																calhm5.1 (ENSSAUG00010015795) ##20	ENSSAUG00010015794
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	2	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a	ENSGT01000000214440.A.a.b.a.g.b.b
European seabass	MODERN SPECIES	6	ENSDLAG00005021917	ppox (ENSDLAG00005034752)	ENSDLAG00005021808	ENSDLAG00005021795	ENSDLAG00005033526	ENSDLAG00005032164	ENSDLAG00005021701	ENSDLAG00005027416	ENSDLAG00005028349	ENSDLAG00005031796	ENSDLAG00005003394	ENSDLAG00005002611	ENSDLAG00005021545	ENSDLAG00005021298	calhm6 (ENSDLAG00005021278) ##20	calhm5.1 (ENSDLAG00005030426) ##20	rwdd1 (ENSDLAG00005004061)	zufsp (ENSDLAG00005028879)	kpna5 (ENSDLAG00005021221)	gprc6a (ENSDLAG00005021197)	ENSDLAG00005021190	ENSDLAG00005020985	ENSDLAG00005020622	preb (ENSDLAG00005020592)	lyplal1 (ENSDLAG00005020575)	tgfb2 (ENSDLAG00005020553)	RRP15 (ENSDLAG00005020551)	ENSDLAG00005020542	ENSDLAG00005031481	ENSDLAG00005028713	ENSDLAG00005016634
Large yellow croaker	MODERN SPECIES	484	ankrd10a (ENSLCRG00005013213)	ddx4 (ENSLCRG00005013232)	UBE3A (ENSLCRG00005014475)	CNGA3 (ENSLCRG00005014496)	ENSLCRG00005014509	atp1b1b (ENSLCRG00005014513)	ENSLCRG00005014515	ENSLCRG00005014522	atg3 (ENSLCRG00005014531)	SLC19A2 (ENSLCRG00005014695)	ENSLCRG00005014696	ENSLCRG00005014698	TCAIM (ENSLCRG00005014700)	cnot10 (ENSLCRG00005014708)	calhm6 (ENSLCRG00005014713) ##20	calhm5.1 (ENSLCRG00005014714) ##20	rwdd1 (ENSLCRG00005014715)	ENSLCRG00005014716	zufsp (ENSLCRG00005014717)	kpna5 (ENSLCRG00005014722)	gprc6a (ENSLCRG00005014830)	CNIH4 (ENSLCRG00005014831)	ENSLCRG00005014832	WDR26 (ENSLCRG00005002978)	ADCY3 (ENSLCRG00005003702)	ENSLCRG00005003760	preb (ENSLCRG00005003784)	SMCO4 (ENSLCRG00005003809)	ENSLCRG00005003815	lyplal1 (ENSLCRG00005003818)	tgfb2 (ENSLCRG00005003829)
Ovalentaria	ANCESTRAL SPECIES	36	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031
Ovalentaria_B	ANCESTRAL SPECIES	1	ENSGT00980000198721	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000155839	ENSGT00940000155610.o.b	ENSGT00940000155377	ENSGT00940000156143.a.a	ENSGT00940000155536
Cichlidae	ANCESTRAL SPECIES	70		ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000177559	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00940000157880.g.a	ENSGT00390000003114.e.b.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009631	ENSGT00940000155536	ENSGT00940000156143.a.a	ENSGT00940000155377
Pseudocrenilabrinae	ANCESTRAL SPECIES	2	ENSGT00940000156143.a.a	ENSGT00940000155377	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00940000177559	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	57	ENSGT00940000156143.a.a	ENSGT00940000155377	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00940000177559	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721
Haplochromini	ANCESTRAL SPECIES	65	ENSGT00940000177907	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00940000179850	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT00940000157845
Burton s mouthbrooder	MODERN SPECIES	1204													bves (ENSHBUG00000013776)	cnot10 (ENSHBUG00000000407)	calhm6 (ENSHBUG00000013648) ##20	calhm5.1 (ENSHBUG00000013639) ##20	TCAIM (ENSHBUG00000013636)	ENSHBUG00000013609
Haplochromini_A	ANCESTRAL SPECIES	69	ENSGT00940000177907	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00940000179850	ENSGT00390000018031	ENSGT00940000155839	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT00940000157845
P. nyererei	MODERN SPECIES	836													bves (ENSPNYG00000015032)	cnot10 (ENSPNYG00000015067)	calhm6 (ENSPNYG00000015123) ##20	calhm5.1 (ENSPNYG00000015155) ##20	TCAIM (ENSPNYG00000015175)	gpd1l (ENSPNYG00000015190)
Haplochromini_B	ANCESTRAL SPECIES	88	ENSGT00940000155610.o.b	ENSGT00390000001960	ENSGT00390000009168	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00940000179850	ENSGT00390000018031	ENSGT00940000155839	ENSGT01100000263556.a.b.a.b.d	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000012832	ENSGT00390000003114.e.b.b	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT00940000156240	ENSGT00390000000420	ENSGT00940000155778.B	ENSGT00940000156479.a	ENSGT00980000198721	ENSGT00940000157845
Zebra mbuna	MODERN SPECIES	1093	ENSMZEG00005025330	ENSMZEG00005025308	TGFBR2 (ENSMZEG00005025305)	GASK1A (ENSMZEG00005025302)	pomgnt2 (ENSMZEG00005025300)	snrka (ENSMZEG00005025293)	ano10a (ENSMZEG00005025286)	ABHD5 (ENSMZEG00005025282)	cndp1 (ENSMZEG00005025273)	tgfb2 (ENSMZEG00005025271)	ENSMZEG00005025270	popdc3 (ENSMZEG00005025268)	bves (ENSMZEG00005025266)	cnot10 (ENSMZEG00005025264)	calhm6 (ENSMZEG00005025263) ##20	calhm5.1 (ENSMZEG00005025261) ##20	TCAIM (ENSMZEG00005025260)	gpd1l (ENSMZEG00005025259)	ggctb (ENSMZEG00005025256)	SLC6A20 (ENSMZEG00005025253)	sacm1lb (ENSMZEG00005025248)	fbl (ENSMZEG00005025246)	dyrk1b (ENSMZEG00005025241)	ppox (ENSMZEG00005025237)	rbm42 (ENSMZEG00005025234)	aldh2.2 (ENSMZEG00005025227)	taf2 (ENSMZEG00005025215)	ENSMZEG00005025205	enpp2 (ENSMZEG00005025192)	ENSMZEG00005025186	ENSMZEG00005025183
Eastern happy	MODERN SPECIES	2	rrp15 (ENSACLG00000005886)	rwdd1 (ENSACLG00000005871)	kpna5 (ENSACLG00000005843)	CNIH4 (ENSACLG00000005821)	ENSACLG00000005814	WDR26 (ENSACLG00000005793)	ADCY3 (ENSACLG00000005651)	ENSACLG00000005631	preb (ENSACLG00000005622)	HACE1 (ENSACLG00000005525)	ENSACLG00000005514	popdc3 (ENSACLG00000005508)	bves (ENSACLG00000005470)	cnot10 (ENSACLG00000005427)	calhm6 (ENSACLG00000005415) ##20	calhm5.1 (ENSACLG00000005412) ##20	TCAIM (ENSACLG00000005372)	gpd1l (ENSACLG00000005357)	ENSACLG00000005353	ggctb (ENSACLG00000005344)	ENSACLG00000005338	SLC6A20 (ENSACLG00000005299)	sacm1lb (ENSACLG00000005262)	ENSACLG00000005242	fbl (ENSACLG00000005227)	dyrk1b (ENSACLG00000005208)	ppox (ENSACLG00000005012)	rbm42 (ENSACLG00000004988)	ENSACLG00000004956	taf2 (ENSACLG00000004877)	enpp2 (ENSACLG00000004760)
Lyretail cichlid	MODERN SPECIES	549																calhm5.1 (ENSNBRG00000000653) ##20	TCAIM (ENSNBRG00000000600)	gpd1l (ENSNBRG00000000562)	ggctb (ENSNBRG00000000466)	SLC6A20 (ENSNBRG00000000425)	sacm1lb (ENSNBRG00000024412)	ENSNBRG00000024411	ENSNBRG00000024410	fbl (ENSNBRG00000024409)	dyrk1b (ENSNBRG00000024408)	ppox (ENSNBRG00000024407)	ENSNBRG00000024406	aldh2.2 (ENSNBRG00000024405)	ENSNBRG00000024404	ENSNBRG00000024403
Nile tilapia	MODERN SPECIES	2	ENSONIG00000033942	rrp15 (ENSONIG00000028653)	ENSONIG00000043179	rwdd1 (ENSONIG00000016531)	kpna5 (ENSONIG00000016528)	cnih4 (ENSONIG00000043072)	WDR26 (ENSONIG00000016524)	ADCY3 (ENSONIG00000016520)	ENSONIG00000029075	preb (ENSONIG00000016516)	HACE1 (ENSONIG00000016512)	popdc3 (ENSONIG00000016510)	bves (ENSONIG00000016509)	cnot10 (ENSONIG00000016505)	calhm6 (ENSONIG00000034445) ##20	calhm5.1 (ENSONIG00000028258) ##20	TCAIM (ENSONIG00000016502)	ENSONIG00000016501	ggctb (ENSONIG00000035530)	ENSONIG00000031132	SLC6A20 (ENSONIG00000008058)	sacm1lb (ENSONIG00000008051)	fbl (ENSONIG00000008042)	dyrk1b (ENSONIG00000008036)	ppox (ENSONIG00000008031)	rbm42 (ENSONIG00000008029)	aldh2.2 (ENSONIG00000008021)	taf2 (ENSONIG00000008014)	enpp2 (ENSONIG00000007998)	ENSONIG00000007996	ENSONIG00000029622
Midas cichlid	MODERN SPECIES	1295																calhm5.1 (ENSACIG00000009821) ##20	rwdd1 (ENSACIG00000009832)	ENSACIG00000009857	zufsp (ENSACIG00000009874)	kpna5 (ENSACIG00000009898)	cnot10 (ENSACIG00000009933)	TCAIM (ENSACIG00000009977)
Atherinomorphae	ANCESTRAL SPECIES	72			ENSGT00940000156479.a	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00390000018031	ENSGT00390000001960
Oryzias	ANCESTRAL SPECIES	90										ENSGT00940000155610.o.b	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009631	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000160695
Oryzias_b	ANCESTRAL SPECIES	119										ENSGT00940000155610.o.b	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00940000170371	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000160695
Indian medaka	MODERN SPECIES	1	exoc3 (ENSOMEG00000020408)	ENSOMEG00000020426	ENSOMEG00000020694	ENSOMEG00000020757	APCDD1 (ENSOMEG00000020792)	ENSOMEG00000020818	vapal (ENSOMEG00000020844)	RAB31 (ENSOMEG00000020892)	ralbp1 (ENSOMEG00000020927)	twsg1a (ENSOMEG00000020956)	ankrd12 (ENSOMEG00000020989)	ndufv2 (ENSOMEG00000021019)	acss2l (ENSOMEG00000021123)	popdc3 (ENSOMEG00000021146)	rwdd1 (ENSOMEG00000021190)	calhm5.1 (ENSOMEG00000021203) ##20	ENSOMEG00000000807	ENSOMEG00000021221	ENSOMEG00000021244	aldh2.2 (ENSOMEG00000000560)	pomgnt2 (ENSOMEG00000021302)	PIEZO2 (ENSOMEG00000021323)	ENSOMEG00000021370	mppe1 (ENSOMEG00000021401)	ENSOMEG00000021470	tmem14cb (ENSOMEG00000021488)	pak1ip1 (ENSOMEG00000021526)	si:dkey-222f8.3 (ENSOMEG00000021550)	ENSOMEG00000021560	CC2D1B (ENSOMEG00000021593)	ZFYVE9 (ENSOMEG00000021638)
Javanese ricefish	MODERN SPECIES	7	emc2 (ENSOJAG00000008476)	TMEM74 (ENSOJAG00000008575)	ENSOJAG00000008602	TRHR (ENSOJAG00000008635)	ENSOJAG00000008654	ENY2 (ENSOJAG00000008700)	gdf6a (ENSOJAG00000008753)	ENSOJAG00000008844	sybu (ENSOJAG00000008884)	ebag9 (ENSOJAG00000008896)	ENSOJAG00000008922	ASCC3 (ENSOJAG00000009078)	cyb5r4 (ENSOJAG00000009780)	CNIH4 (ENSOJAG00000009862)	calhm6 (ENSOJAG00000009878) ##20	calhm5.1 (ENSOJAG00000009884) ##20	ENSOJAG00000009901	ENSOJAG00000009955	ENSOJAG00000009970	mc2r (ENSOJAG00000010001)	ENSOJAG00000010023	RSPO2 (ENSOJAG00000010054)	ENSOJAG00000010115	hamp2 (ENSOJAG00000010151)	ENSOJAG00000010255	ENSOJAG00000010510	ENSOJAG00000010541	zgc:91890 (ENSOJAG00000010827)	NFATC1 (ENSOJAG00000010838)	SALL3 (ENSOJAG00000010844)	ENSOJAG00000010858
Oryzias_a	ANCESTRAL SPECIES	9	ENSGT01000000214440.A.a.a	ENSGT00940000157640	ENSGT00940000162584.j.b	ENSGT00940000179051	ENSGT00940000162584.j.a.a	ENSGT00940000159017.a.a	ENSGT00940000157845	ENSGT00940000155778.B	ENSGT00390000000420	ENSGT00940000155610.o.b	ENSGT00940000155839	ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00390000009168	ENSGT01030000234610.a.a.ab.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009631	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000160695	ENSGT00950000182834.B	ENSGT00940000155536	ENSGT00940000155377	ENSGT00940000158391.g.b.a	ENSGT00940000155488.m.b	ENSGT00390000001296	ENSGT00390000012690.a	ENSGT00940000155721.b.b	ENSGT01030000234510.a.a.b	ENSGT01030000234510.a.a.a.a.a.a	ENSGT00940000157034
Japanese Medaka HdrR	MODERN SPECIES	7	ENSORLG00000028765	ENSORLG00000023376	GRIK2 (ENSORLG00000004024)	ENSORLG00000030346	ENSORLG00000029236	HACE1 (ENSORLG00000004108)	bves (ENSORLG00000026132)	popdc3 (ENSORLG00000019669)	rwdd1 (ENSORLG00000020455)	calhm6 (ENSORLG00000022358) ##20	ENSORLG00000027934 ##20	ENSORLG00000023928 ##20	ENSORLG00000029639 ##20	ENSORLG00000026639 ##20	ENSORLG00000029065 ##20	calhm5.1 (ENSORLG00000024597) ##20	cep162 (ENSORLG00000004117)	ENSORLG00000025975	aldh2.2 (ENSORLG00000004139)	pomgnt2 (ENSORLG00000022061)	CNIH4 (ENSORLG00000004148)	cyb5r4 (ENSORLG00000004179)	ASCC3 (ENSORLG00000004221)	GADL1 (ENSORLG00000004244)	stt3b (ENSORLG00000004284)	zgc:77056 (ENSORLG00000004295)	ENSORLG00000022263	zdhhc3a (ENSORLG00000004309)	mc2r (ENSORLG00000029881)	mc5rb (ENSORLG00000004348)	tcea3 (ENSORLG00000004368)
Chinese medaka	MODERN SPECIES	36														rwdd1 (ENSOSIG00000011937)	calhm6 (ENSOSIG00000011935) ##20	calhm5.1 (ENSOSIG00000011934) ##20	cep162 (ENSOSIG00000011932)	ENSOSIG00000011930	aldh2.2 (ENSOSIG00000006893)	pomgnt2 (ENSOSIG00000006845)	CNIH4 (ENSOSIG00000006842)	cyb5r4 (ENSOSIG00000006839)	ASCC3 (ENSOSIG00000005567)	GADL1 (ENSOSIG00000000522)	stt3b (ENSOSIG00000000465)	zgc:77056 (ENSOSIG00000000455)	tmem42a (ENSOSIG00000000453)	zdhhc3a (ENSOSIG00000000449)	mc2r (ENSOSIG00000000445)	mc5rb (ENSOSIG00000000423)	ENSOSIG00000000415
Cyprinodontiformes	ANCESTRAL SPECIES		ENSGT00390000002563.a	ENSGT00390000002563.b.a.a	ENSGT00940000156479.a	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000164813	ENSGT00390000008744	ENSGT00940000160345	ENSGT00550000074792.b	ENSGT00940000155579.a	ENSGT00940000155873	ENSGT00500000044921.b	ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00390000018031	ENSGT00390000001960
Cyprinodontoidei	ANCESTRAL SPECIES	120															ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924	ENSGT00950000182834.B	ENSGT00390000018031
Poeciliinae	ANCESTRAL SPECIES	22										ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00950000182834.B	ENSGT00940000166924	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000001827	ENSGT00390000012832	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240	ENSGT00940000156479.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000155839
Poecilia	ANCESTRAL SPECIES	87											ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00950000182834.B	ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000001827	ENSGT00390000012832	ENSGT00500000044921.b	ENSGT00940000155873	ENSGT00940000155579.a	ENSGT00550000074792.b	ENSGT00940000160345	ENSGT00390000008744	ENSGT00940000164813	ENSGT01030000234567.A.a.a.a.a.b.e.a	ENSGT00940000156240.w	ENSGT00940000156479.a	ENSGT00390000002563.b.a.a	ENSGT00390000002563.a	ENSGT00940000155839
NAME_6	ANCESTRAL SPECIES	478														ENSGT00390000009168	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000001827	ENSGT00390000012832
Sailfin molly	MODERN SPECIES	1533														rwdd1 (ENSPLAG00000014798)	calhm6 (ENSPLAG00000014805) ##20	calhm5.1 (ENSPLAG00000014831) ##20	cnot10 (ENSPLAG00000014935)	TCAIM (ENSPLAG00000014949)	ENSPLAG00000014958
Amazon molly	MODERN SPECIES	1188														rwdd1 (ENSPFOG00000018542)	calhm6 (ENSPFOG00000021889) ##20	calhm5.1 (ENSPFOG00000018548) ##20	cnot10 (ENSPFOG00000018554)
Guppy	MODERN SPECIES	446	zgc:172339 (ENSPREG00000019059)	aplnr2 (ENSPREG00000019056)	hdac10 (ENSPREG00000019031)	parvb (ENSPREG00000018836)	parvg (ENSPREG00000018764)	SHISAL1 (ENSPREG00000018737)	plxnb2b (ENSPREG00000018664)	TUBGCP6 (ENSPREG00000018614)	appl2 (ENSPREG00000018534)	ENSPREG00000018504	ADCY3 (ENSPREG00000018460)	preb (ENSPREG00000018439)	CNIH4 (ENSPREG00000018420)	rwdd1 (ENSPREG00000018397)	calhm6 (ENSPREG00000018386) ##20	calhm5.1 (ENSPREG00000018380) ##20	cnot10 (ENSPREG00000018348)	TCAIM (ENSPREG00000018323)	ggctb (ENSPREG00000018288)	SLC6A20 (ENSPREG00000018263)	ENSPREG00000018252	sacm1lb (ENSPREG00000018187)	fbl (ENSPREG00000018169)	dyrk1b (ENSPREG00000018152)	ppox (ENSPREG00000018136)	rbm42 (ENSPREG00000018102)	ENSPREG00000018083	aldh2.2 (ENSPREG00000018040)	ENSPREG00000018010	dtnbp1a (ENSPREG00000017991)	popdc3 (ENSPREG00000017962)
Platyfish	MODERN SPECIES	17										ADCY3 (ENSXMAG00000004364)	preb (ENSXMAG00000022783)	CNIH4 (ENSXMAG00000027221)	zufsp (ENSXMAG00000004312)	rwdd1 (ENSXMAG00000004313)	calhm6 (ENSXMAG00000004325) ##20	calhm5.1 (ENSXMAG00000004326) ##20	ENSXMAG00000024570	cnot10 (ENSXMAG00000004332)	TCAIM (ENSXMAG00000015223)	ggctb (ENSXMAG00000025798)	SLC6A20 (ENSXMAG00000025671)	ENSXMAG00000023746	sacm1lb (ENSXMAG00000008541)	fbl (ENSXMAG00000008522)	dyrk1b (ENSXMAG00000003585)	ppox (ENSXMAG00000026912)	rbm42 (ENSXMAG00000012827)	ENSXMAG00000025594	aldh2.2 (ENSXMAG00000024027)	ENSXMAG00000025592	DTNBP1 (ENSXMAG00000015449)
NAME_4	ANCESTRAL SPECIES	471															ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000166924
Mummichog	MODERN SPECIES	140																calhm5.1 (ENSFHEG00000016223) ##20
Sheepshead minnow	MODERN SPECIES	190														pola1 (ENSCVAG00000014504)	calhm6 (ENSCVAG00000014514) ##20	calhm5.1 (ENSCVAG00000014518) ##20	rwdd1 (ENSCVAG00000014549)	zufsp (ENSCVAG00000014574)	CNIH4 (ENSCVAG00000014599)	preb (ENSCVAG00000000371)	ENSCVAG00000014616	epha7 (ENSCVAG00000014629)	ENSCVAG00000014675	ADRA1D (ENSCVAG00000014682)	LRRTM1 (ENSCVAG00000014688)	ctnna2 (ENSCVAG00000014742)
Aplocheiloidei	ANCESTRAL SPECIES	209													ENSGT00390000012832	ENSGT00390000001827	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00950000182834.B	ENSGT00390000018031	ENSGT00390000001960
Turquoise killifish	MODERN SPECIES	1614	ENSNFUG00015000349	GRIK2 (ENSNFUG00015000764)	ASCC3 (ENSNFUG00015002007)	ENSNFUG00015002948	ENSNFUG00015002949	sim1a (ENSNFUG00015002959)	cyb5r4 (ENSNFUG00015002981)	KIAA1009 (ENSNFUG00015002985)	ENSNFUG00015002999	ALDH2 (ENSNFUG00015003353)	FBL (ENSNFUG00015004300)	dyrk1b (ENSNFUG00015004322)	TCAIM (ENSNFUG00015004360)	cnot10 (ENSNFUG00015004532)	FAM26F (ENSNFUG00015005359) ##20	FAM26E (ENSNFUG00015005362) ##20	RWDD1 (ENSNFUG00015005364)	zufsp (ENSNFUG00015005370)	kpna5 (ENSNFUG00015005512)	CNIH4 (ENSNFUG00015006712)	ENSNFUG00015006730	ENSNFUG00015006735	PREB (ENSNFUG00015006741)	rrp15 (ENSNFUG00015006755)	rbm42 (ENSNFUG00015006761)	PPOX (ENSNFUG00015006786)	ggctb (ENSNFUG00015006879)	ENSNFUG00015006884	sacm1lb (ENSNFUG00015006910)	myo1eb (ENSNFUG00015007047)	ENSNFUG00015007095
Mangrove rivulus	MODERN SPECIES	148													TCAIM (ENSKMAG00000011117)	cnot10 (ENSKMAG00000011141)	calhm6 (ENSKMAG00000011195) ##20	calhm5.1 (ENSKMAG00000011200) ##20	ENSKMAG00000011222	sox9a (ENSKMAG00000011239)	ENSKMAG00000011245	ENSKMAG00000011266	ENSKMAG00000011279	TRAPPC9 (ENSKMAG00000011325)	sh3bgrl3 (ENSKMAG00000011419)	paqr7a (ENSKMAG00000011432)	TMEM222 (ENSKMAG00000011442)	tpbga (ENSKMAG00000011469)
Tiger tail seahorse	MODERN SPECIES	288	ENSHCOG00000021217	aldh2.2 (ENSHCOG00000021215)	rbm42 (ENSHCOG00000021214)	ppox (ENSHCOG00000021213)	dyrk1b (ENSHCOG00000021212)	fbl (ENSHCOG00000021211)	sacm1lb (ENSHCOG00000021209)	SLC6A20 (ENSHCOG00000021208)	SLC6A20 (ENSHCOG00000021207)	ggctb (ENSHCOG00000021206)	OSBPL10 (ENSHCOG00000021204)	gpd1l (ENSHCOG00000021202)	TCAIM (ENSHCOG00000021200)	cnot10 (ENSHCOG00000021197)	calhm6 (ENSHCOG00000021194) ##20	calhm5.1 (ENSHCOG00000021192) ##20	rwdd1 (ENSHCOG00000021189)	zufsp (ENSHCOG00000021187)	kpna5 (ENSHCOG00000021185)	gprc6a (ENSHCOG00000021184)	CNIH4 (ENSHCOG00000021182)	WDR26 (ENSHCOG00000021180)	ADCY3 (ENSHCOG00000021175)	preb (ENSHCOG00000021172)	lyplal1 (ENSHCOG00000021169)	tgfb2 (ENSHCOG00000021165)	rrp15 (ENSHCOG00000021163)	vegfaa (ENSHCOG00000021159)	popdc3 (ENSHCOG00000021156)	bves (ENSHCOG00000021154)	HACE1 (ENSHCOG00000021151)
Pinecone sodierfish	MODERN SPECIES	7	zgc:91890 (ENSMMDG00005022798)	NFATC1 (ENSMMDG00005022799)	SALL3 (ENSMMDG00005022800)	ENSMMDG00005022802	mbpb (ENSMMDG00005022804)	ENSMMDG00005022805	ZNF236 (ENSMMDG00005022806)	ZNF516 (ENSMMDG00005022812)	TSHZ1 (ENSMMDG00005022813)	PTGR3 (ENSMMDG00005022815)	ZNF407 (ENSMMDG00005022816)	CNDP1 (ENSMMDG00005022820)	TCAIM (ENSMMDG00005022916)	cnot10 (ENSMMDG00005023045)	calhm6 (ENSMMDG00005023416) ##20	calhm5.1 (ENSMMDG00005023417) ##20	rwdd1 (ENSMMDG00005008279)	ENSMMDG00005008321	ENSMMDG00005009113	sult2st3 (ENSMMDG00005009114)	tmem147 (ENSMMDG00005009117)	ENSMMDG00005009120	gapdhs (ENSMMDG00005009131)	SCX (ENSMMDG00005009170)	ENSMMDG00005009173	hpn (ENSMMDG00005009181)	ENSMMDG00005009191	ENSMMDG00005009194	fxyd3 (ENSMMDG00005009197)	sdha (ENSMMDG00005009277)	ccdc127a (ENSMMDG00005012427)
Cod	MODERN SPECIES	2	ENSGMOG00000006545	ENSGMOG00000034847	ENSGMOG00000032792	ENSGMOG00000022230	zgc:91890 (ENSGMOG00000006625)	NFATC1 (ENSGMOG00000006631)	SALL3 (ENSGMOG00000035951)	GALR1 (ENSGMOG00000018051)	ENSGMOG00000027182	ZNF236 (ENSGMOG00000006668)	ZNF516 (ENSGMOG00000025897)	TSHZ1 (ENSGMOG00000032771)	PTGR3 (ENSGMOG00000006772)	ENSGMOG00000006780	calhm6 (ENSGMOG00000007041) ##20	calhm5.1 (ENSGMOG00000007051) ##20	rwdd1 (ENSGMOG00000009852)	ENSGMOG00000007067	zufsp (ENSGMOG00000007079)	kpna5 (ENSGMOG00000007147)	gprc6a (ENSGMOG00000007217)	ENSGMOG00000023864	ENSGMOG00000017396	RRP15 (ENSGMOG00000017385)	tgfb2 (ENSGMOG00000017371)	ENSGMOG00000024728	lyplal1 (ENSGMOG00000014091)	preb (ENSGMOG00000014062)	ENSGMOG00000014013	ENSGMOG00000013975	ENSGMOG00000013962
Protacanthopterygii	ANCESTRAL SPECIES	50	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b.e	ENSGT00940000163155.g	ENSGT00940000157719	ENSGT01060000248664	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b	ENSGT00950000182834.B	ENSGT00940000153634.b.a	ENSGT00940000156549.a.a	ENSGT00390000018031	ENSGT00940000159171	ENSGT00940000157390	ENSGT00390000001960	ENSGT00390000008751.a.fb	ENSGT00940000157284.cb.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	32	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.h	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.f
Salmoninae_a	ANCESTRAL SPECIES	39	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000164536.a.b.e.b	ENSGT00940000154272.A.c	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000164932	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.h	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155194.v.b.c	ENSGT00390000013174.d	ENSGT00940000157034.k	ENSGT00940000155543.r
Salmo	ANCESTRAL SPECIES	1	ENSGT00950000183134.c.a.b.b	ENSGT00940000164536.a.b.e.b	ENSGT00940000154272.A.c	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000164932	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.g.a	ENSGT00990000212421	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c.a	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155194.v.b.c	ENSGT00390000013174.d	ENSGT00940000157034.k	ENSGT00940000157582.g.k
Atlantic salmon	MODERN SPECIES	24	ENSSSAG00000111538	SNAP91 (ENSSSAG00000003416)	prss35 (ENSSSAG00000088322)	ME1 (ENSSSAG00000003083)	ENSSSAG00000066203	zgc:172323 (ENSSSAG00000002999)	ENSSSAG00000002985	usp45 (ENSSSAG00000002007)	pnisr (ENSSSAG00000001940)	coq3 (ENSSSAG00000001931)	FAXC (ENSSSAG00000112824)	fbxl4 (ENSSSAG00000066863)	ENSSSAG00000066861	ENSSSAG00000092491	klhl32 (ENSSSAG00000066604)	ENSSSAG00000090299 ##20	calhm6 (ENSSSAG00000067297) ##20	clec3ba (ENSSSAG00000066581)	ENSSSAG00000066565	ENSSSAG00000099197	ENSSSAG00000097236	ENSSSAG00000065817	ENSSSAG00000065100	PREB (ENSSSAG00000065064)	lyplal1 (ENSSSAG00000114678)	tgfb2 (ENSSSAG00000112951)	ENSSSAG00000064843	ENSSSAG00000096615	ENSSSAG00000088922	ENSSSAG00000064269	ENSSSAG00000090864
River trout	MODERN SPECIES	22	MCHR2 (ENSSTUG00000000170)	prdm13 (ENSSTUG00000000169)	zgc:172323 (ENSSTUG00000000167)	ENSSTUG00000000165	usp45 (ENSSTUG00000000145)	ENSSTUG00000000111	coq3 (ENSSTUG00000000108)	FAXC (ENSSTUG00000000105)	fbxl4 (ENSSTUG00000000104)	ENSSTUG00000000060	pou3f2b (ENSSTUG00000000053)	ENSSTUG00000047321	mms22l (ENSSTUG00000047312)	klhl32 (ENSSTUG00000047293)	calhm6 (ENSSTUG00000047289) ##20	CALHM5 (ENSSTUG00000047286) ##20	CLEC3B (ENSSTUG00000047279)	ENSSTUG00000047266	CNIH4 (ENSSTUG00000047263)	WDR26 (ENSSTUG00000047200)	ADCY3 (ENSSTUG00000047107)	preb (ENSSTUG00000047056)	lyplal1 (ENSSTUG00000047035)	tgfb2 (ENSSTUG00000047009)	rrp15 (ENSSTUG00000046995)	ENSSTUG00000046992	NAGA (ENSSTUG00000046944)	vegfaa (ENSSTUG00000046922)	gpn2 (ENSSTUG00000046892)	ENSSTUG00000046200	pigv (ENSSTUG00000046143)
Oncorhynchus	ANCESTRAL SPECIES	38	ENSGT00950000183068.b.c.a.f.a.b	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.g.a	ENSGT00940000162208.`c.a.a	ENSGT00950000182966.A.a.a.q.b	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v.a	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155634.r	ENSGT00390000013174.d	ENSGT00940000157034.k	ENSGT00940000155543.r.a
Oncorhynchus_a	ANCESTRAL SPECIES	39	ENSGT00390000000155.b.b.c	ENSGT00950000183134.c.a.b.b	ENSGT00940000160200.d	ENSGT00940000164536.a.b.e.a	ENSGT00940000157719.g	ENSGT01060000248664.a	ENSGT00390000007284.f	ENSGT00950000182919.A.o.g.b	ENSGT00940000155184.g.a	ENSGT01060000251668	ENSGT00940000162208.`c.a.a	ENSGT00950000182966.A.a.a.q.b	ENSGT00940000170209	ENSGT00940000157179.h	ENSGT01030000234610.a.a.bb ##20	ENSGT01030000234610.a.b.e ##20	ENSGT00950000183186.B.b.c	ENSGT00390000017627.a.a.b.a	ENSGT00950000182834.B.b	ENSGT00940000153634.b.a.d	ENSGT00940000156549.a.a.f	ENSGT00390000018031.h	ENSGT00940000159171.h	ENSGT00940000157390.s	ENSGT00390000001960.v.a	ENSGT00390000008751.a.fb.c	ENSGT00940000157284.cb.a.e.b	ENSGT00940000155634.r	ENSGT00390000013174.d	ENSGT00940000157034.k	ENSGT00940000155543.r.a
Chinook salmon	MODERN SPECIES	15	prdm13 (ENSOTSG00005017063)	zgc:172323 (ENSOTSG00005017065)	usp45 (ENSOTSG00005002712)	ENSOTSG00005002838	coq3 (ENSOTSG00005002853)	FAXC (ENSOTSG00005002867)	fbxl4 (ENSOTSG00005002873)	ENSOTSG00005002899	pou3f2b (ENSOTSG00005002902)	slc39a9 (ENSOTSG00005002906)	PLEKHD1 (ENSOTSG00005002915)	ENSOTSG00005002920	ENSOTSG00005002925	klhl32 (ENSOTSG00005002930)	calhm6 (ENSOTSG00005002936) ##20	CALHM5 (ENSOTSG00005002941) ##20	CLEC3B (ENSOTSG00005002944)	FEZ2 (ENSOTSG00005002951)	CNIH4 (ENSOTSG00005002967)	WDR26 (ENSOTSG00005002988)	ADCY3 (ENSOTSG00005003666)	preb (ENSOTSG00005004135)	lyplal1 (ENSOTSG00005004139)	tgfb2 (ENSOTSG00005004144)	rrp15 (ENSOTSG00005004148)	ENSOTSG00005004151	NAGA (ENSOTSG00005004153)	vegfaa (ENSOTSG00005004156)	ENSOTSG00005004179	ENSOTSG00005004195	pigv (ENSOTSG00005004600)
Coho salmon	MODERN SPECIES	4	ME1 (ENSOKIG00005009034)	prdm13 (ENSOKIG00005008929)	zgc:172323 (ENSOKIG00005008902)	usp45 (ENSOKIG00005008628)	ENSOKIG00005008542	coq3 (ENSOKIG00005008521)	ENSOKIG00005008516	FAXC (ENSOKIG00005008495)	fbxl4 (ENSOKIG00005008388)	ENSOKIG00005008350	pou3f2b (ENSOKIG00005008346)	ENSOKIG00005008338	ENSOKIG00005008317	klhl32 (ENSOKIG00005007985)	calhm6 (ENSOKIG00005007934) ##20	CALHM5 (ENSOKIG00005007923) ##20	CLEC3B (ENSOKIG00005007908)	ENSOKIG00005007873	CNIH4 (ENSOKIG00005007854)	WDR26 (ENSOKIG00005007431)	ADCY3 (ENSOKIG00005007287)	preb (ENSOKIG00005007247)	lyplal1 (ENSOKIG00005007205)	tgfb2 (ENSOKIG00005007159)	rrp15 (ENSOKIG00005007123)	NAGA (ENSOKIG00005007071)	ENSOKIG00005007011	ARID1A (ENSOKIG00005006522)	PIGV (ENSOKIG00005006460)	tcea3 (ENSOKIG00005006353)	ENSOKIG00005006319
Rainbow trout	MODERN SPECIES	11	prdm13 (ENSOMYG00000042461)	zgc:172323 (ENSOMYG00000042468)	usp45 (ENSOMYG00000042501)	ENSOMYG00000061478	ENSOMYG00000042575	coq3 (ENSOMYG00000056709)	FAXC (ENSOMYG00000042605)	fbxl4 (ENSOMYG00000000094)	ENSOMYG00000000099	pou3f2b (ENSOMYG00000042617)	ENSOMYG00000049595	ENSOMYG00000000116	ENSOMYG00000076687	klhl32 (ENSOMYG00000000141)	calhm6 (ENSOMYG00000000154) ##20	ENSOMYG00000000157 ##20	ENSOMYG00000000168	ENSOMYG00000000221	ENSOMYG00000000242	ENSOMYG00000000389	ENSOMYG00000000480	preb (ENSOMYG00000000508)	lyplal1 (ENSOMYG00000000518)	tgfb2 (ENSOMYG00000000524)	ENSOMYG00000052309	RRP15 (ENSOMYG00000000540)	ENSOMYG00000000625	ENSOMYG00000075765	ENSOMYG00000000680	ENSOMYG00000061903	ENSOMYG00000000708
Huchen	MODERN SPECIES	716		prdm13 (ENSHHUG00000001290)	zgc:172323 (ENSHHUG00000001276)	tstd3 (ENSHHUG00000001251)	usp45 (ENSHHUG00000001208)	ENSHHUG00000001200	coq3 (ENSHHUG00000001197)	FAXC (ENSHHUG00000001193)	fbxl4 (ENSHHUG00000001181)	ENSHHUG00000001127	pou3f2b (ENSHHUG00000001124)	ENSHHUG00000001101	ENSHHUG00000001072	ENSHHUG00000001067	calhm6 (ENSHHUG00000001064) ##20	CALHM5 (ENSHHUG00000001034) ##20	CLEC3B (ENSHHUG00000001026)	ENSHHUG00000001007	CNIH4 (ENSHHUG00000000958)	WDR26 (ENSHHUG00000000821)	ADCY3 (ENSHHUG00000000792)	preb (ENSHHUG00000000762)	lyplal1 (ENSHHUG00000000755)	tgfb2 (ENSHHUG00000000687)	rrp15 (ENSHHUG00000000658)	ENSHHUG00000000446	NAGA (ENSHHUG00000000279)	vegfaa (ENSHHUG00000000260)	gpatch3 (ENSHHUG00000000200)
Salmoninae	ANCESTRAL SPECIES	868															ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g
Salmoninae_a	ANCESTRAL SPECIES	90	ENSGT00390000000155.b.b.d	ENSGT00950000183134.c.a.b.a	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00390000001960.u	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a	ENSGT00940000164873	ENSGT00390000002144.db.a
Salmo	ANCESTRAL SPECIES	32	ENSGT00950000183068.b.c.a.e	ENSGT00390000000155.b.b.d	ENSGT00950000183134.c.a.b.a	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT00730000111138	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00390000011769.c	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00950000183186.B.b.c.b	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00390000001960.u	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a.a	ENSGT00940000164873.c
River trout	MODERN SPECIES	30	prss35 (ENSSTUG00000045899)	ME1 (ENSSTUG00000045918)	MCHR2 (ENSSTUG00000046174)	prdm13 (ENSSTUG00000046180)	zgc:172323 (ENSSTUG00000046189)	tstd3 (ENSSTUG00000046201)	usp45 (ENSSTUG00000046215)	pnisr (ENSSTUG00000046329)	coq3 (ENSSTUG00000046344)	FAXC (ENSSTUG00000046360)	fbxl4 (ENSSTUG00000046367)	pou3f2b (ENSSTUG00000046400)	mms22l (ENSSTUG00000046412)	klhl32 (ENSSTUG00000046454)	calhm6 (ENSSTUG00000046638) ##20	CALHM5 (ENSSTUG00000046640) ##20	CLEC3B (ENSSTUG00000046645)	ENSSTUG00000046653	CNIH4 (ENSSTUG00000046666)	WDR26 (ENSSTUG00000046681)	ADCY3 (ENSSTUG00000046777)	preb (ENSSTUG00000046977)	lyplal1 (ENSSTUG00000046983)	ENSSTUG00000046989	tgfb2 (ENSSTUG00000046994)	rrp15 (ENSSTUG00000047014)	NAGA (ENSSTUG00000047038)	vegfaa (ENSSTUG00000047255)	SCMH1 (ENSSTUG00000047262)	cited4b (ENSSTUG00000047280)	ctps1b (ENSSTUG00000047288)
Atlantic salmon	MODERN SPECIES	11	SNAP91 (ENSSSAG00000121908)	prss35 (ENSSSAG00000119277)	ME1 (ENSSSAG00000121440)	MCHR2 (ENSSSAG00000109843)	prdm13 (ENSSSAG00000066208)	tstd3 (ENSSSAG00000066230)	usp45 (ENSSSAG00000066250)	ENSSSAG00000119597	coq3 (ENSSSAG00000066313)	FAXC (ENSSSAG00000066319)	fbxl4 (ENSSSAG00000066330)	ENSSSAG00000066461	mms22l (ENSSSAG00000066484)	klhl32 (ENSSSAG00000067054)	ENSSSAG00000098439	ENSSSAG00000100982 ##20	ENSSSAG00000067305	ENSSSAG00000067321	ENSSSAG00000120562	ENSSSAG00000067699	ENSSSAG00000067890	PREB (ENSSSAG00000068167)	ENSSSAG00000101706	lyplal1 (ENSSSAG00000068174)	tgfb2 (ENSSSAG00000086156)	RRP15 (ENSSSAG00000068185)	ENSSSAG00000068191	ENSSSAG00000088004	ENSSSAG00000068306	ENSSSAG00000104619	scmh1 (ENSSSAG00000068322)
Oncorhynchus	ANCESTRAL SPECIES	3	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000164536.a.b.e.b	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a.a.a	ENSGT00950000182919.A.o.g.a.b	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00980000202590	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a	ENSGT00940000164873	ENSGT00390000002144.db.a
Oncorhynchus_a	ANCESTRAL SPECIES	8	ENSGT00940000154272.A.d	ENSGT00940000160200.c	ENSGT00940000164536.a.b.e.b	ENSGT00940000163155.g	ENSGT00940000157719.h	ENSGT01060000248664.b	ENSGT00390000007284.e	ENSGT00950000182919.A.o.g.a.a.a	ENSGT00950000182919.A.o.g.a.b	ENSGT00940000155184.g.b	ENSGT00940000162208.`c.a.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179.g	ENSGT01030000234610.a.a.cb ##20	ENSGT01030000234610.a.b.f ##20	ENSGT00390000017627.a.a.b.b	ENSGT00950000182834.B.a	ENSGT00940000153634.b.a.c	ENSGT00940000156549.a.a.e	ENSGT00390000018031.g	ENSGT00940000159171.g	ENSGT00940000157390.t	ENSGT00980000202590	ENSGT00970000196976.B	ENSGT00390000008751.a.fb.d	ENSGT00940000157284.cb.a.e.a	ENSGT00940000157999.g.a	ENSGT00530000063624.C.b.e	ENSGT00910000144179.b.b.o.a	ENSGT00940000164873
Coho salmon	MODERN SPECIES	11	ENSOKIG00005000999	MCHR2 (ENSOKIG00005001085)	prdm13 (ENSOKIG00005001091)	zgc:172323 (ENSOKIG00005001095)	tstd3 (ENSOKIG00005001101)	usp45 (ENSOKIG00005001130)	ENSOKIG00005001170	coq3 (ENSOKIG00005001185)	FAXC (ENSOKIG00005001189)	fbxl4 (ENSOKIG00005001202)	pou3f2b (ENSOKIG00005001217)	ENSOKIG00005001221	mms22l (ENSOKIG00005001245)	klhl32 (ENSOKIG00005001284)	calhm6 (ENSOKIG00005001320) ##20	CALHM5 (ENSOKIG00005001324) ##20	FEZ2 (ENSOKIG00005001335)	CNIH4 (ENSOKIG00005001346)	WDR26 (ENSOKIG00005001382)	ADCY3 (ENSOKIG00005001555)	preb (ENSOKIG00005001603)	lyplal1 (ENSOKIG00005001619)	tgfb2 (ENSOKIG00005001627)	ENSOKIG00005001636	ENSOKIG00005001640	ENSOKIG00005001641	vegfaa (ENSOKIG00005001653)	SCMH1 (ENSOKIG00005001662)	cited4b (ENSOKIG00005001670)	ctps1b (ENSOKIG00005001681)	rab42b (ENSOKIG00005001723)
Chinook salmon	MODERN SPECIES	22	sh3d21 (ENSOTSG00005011372)	THRAP3 (ENSOTSG00005011377)	ENSOTSG00005011382	MAP7D1 (ENSOTSG00005011384)	ENSOTSG00005000717	SNIP1 (ENSOTSG00005002012)	dnali1 (ENSOTSG00005002016)	gnl2 (ENSOTSG00005002018)	rspo1 (ENSOTSG00005002019)	FHL3 (ENSOTSG00005002021)	utp11 (ENSOTSG00005002023)	pou3f1 (ENSOTSG00005002026)	mms22l (ENSOTSG00005002033)	klhl32 (ENSOTSG00005002042)	calhm6 (ENSOTSG00005002060) ##20	CALHM5 (ENSOTSG00005002062) ##20	ENSOTSG00005002063	CNIH4 (ENSOTSG00005002066)	WDR26 (ENSOTSG00005002078)	ADCY3 (ENSOTSG00005004233)	preb (ENSOTSG00005005222)	lyplal1 (ENSOTSG00005005225)	tgfb2 (ENSOTSG00005005228)	rrp15 (ENSOTSG00005005231)	ENSOTSG00005005232	NAGA (ENSOTSG00005005238)	vegfaa (ENSOTSG00005005278)	SCMH1 (ENSOTSG00005005279)	cited4b (ENSOTSG00005005280)	ctps1b (ENSOTSG00005005284)	rab42b (ENSOTSG00005005316)
Rainbow trout	MODERN SPECIES	21	prdm13 (ENSOMYG00000007035)	zgc:172323 (ENSOMYG00000007100)	tstd3 (ENSOMYG00000007121)	usp45 (ENSOMYG00000007543)	ENSOMYG00000007717	coq3 (ENSOMYG00000007731)	FAXC (ENSOMYG00000007743)	ENSOMYG00000072280	ENSOMYG00000007763	fbxl4 (ENSOMYG00000007888)	ENSOMYG00000066894	pou3f2b (ENSOMYG00000007931)	mms22l (ENSOMYG00000008087)	klhl32 (ENSOMYG00000008179)	calhm6 (ENSOMYG00000008200) ##20	ENSOMYG00000008222 ##20	ENSOMYG00000008293	ENSOMYG00000008325	ENSOMYG00000055303	ENSOMYG00000008508	ENSOMYG00000009090	preb (ENSOMYG00000010110)	lyplal1 (ENSOMYG00000010154)	tgfb2 (ENSOMYG00000010167)	RRP15 (ENSOMYG00000010205)	ENSOMYG00000060367	ENSOMYG00000010253	ENSOMYG00000073357	vegf (ENSOMYG00000010298)	ENSOMYG00000010321	ENSOMYG00000000046
Huchen	MODERN SPECIES	2282														WDR26 (ENSHHUG00000032677)	CNIH4 (ENSHHUG00000032673)	CALHM5 (ENSHHUG00000032671) ##20	ENSHHUG00000032670	calhm6 (ENSHHUG00000032658) ##20	klhl32 (ENSHHUG00000032645)	mms22l (ENSHHUG00000051787)
Northern pike	DUPLICATION
Northern pike	DUPLICATION
Northern pike	MODERN SPECIES	19	prdm13 (ENSELUG00000021488)	zgc:172323 (ENSELUG00000021548)	tstd3 (ENSELUG00000021558)	usp45 (ENSELUG00000021576)	ENSELUG00000021610	FAXC (ENSELUG00000021686)	fbxl4 (ENSELUG00000021753)	ENSELUG00000031675	pou3f2b (ENSELUG00000021783)	ENSELUG00000021822	mms22l (ENSELUG00000021852)	klhl32 (ENSELUG00000021919)	calhm6 (ENSELUG00000021932) ##20	CALHM5 (ENSELUG00000026396) ##20	ENSELUG00000033369	CALHM5 (ENSELUG00000021954) ##20	CALHM5 (ENSELUG00000021974) ##20	CLEC3B (ENSELUG00000021991)	ENSELUG00000022022	CNIH4 (ENSELUG00000022088)	WDR26 (ENSELUG00000022137)	ADCY3 (ENSELUG00000022209)	preb (ENSELUG00000022220)	lyplal1 (ENSELUG00000021027)	tgfb2 (ENSELUG00000024911)	rrp15 (ENSELUG00000011708)	ENSELUG00000030588	ENSELUG00000029571	vegfaa (ENSELUG00000022721)	ENSELUG00000025108	ENSELUG00000033167
Northern pike	MODERN SPECIES	19	prss35 (ENSELUG00000021420)	me1 (ENSELUG00000001462)	prdm13 (ENSELUG00000021488)	zgc:172323 (ENSELUG00000021548)	tstd3 (ENSELUG00000021558)	usp45 (ENSELUG00000021576)	ENSELUG00000021610	FAXC (ENSELUG00000021686)	fbxl4 (ENSELUG00000021753)	ENSELUG00000031675	pou3f2b (ENSELUG00000021783)	ENSELUG00000021822	mms22l (ENSELUG00000021852)	klhl32 (ENSELUG00000021919)	calhm6 (ENSELUG00000021932) ##20	CALHM5 (ENSELUG00000026396) ##20	ENSELUG00000033369	CALHM5 (ENSELUG00000021954) ##20	CALHM5 (ENSELUG00000021974) ##20	CLEC3B (ENSELUG00000021991)	ENSELUG00000022022	CNIH4 (ENSELUG00000022088)	WDR26 (ENSELUG00000022137)	ADCY3 (ENSELUG00000022209)	preb (ENSELUG00000022220)	lyplal1 (ENSELUG00000021027)	tgfb2 (ENSELUG00000024911)	rrp15 (ENSELUG00000011708)	ENSELUG00000030588	ENSELUG00000029571	vegfaa (ENSELUG00000022721)
Northern pike	MODERN SPECIES	19	zgc:172323 (ENSELUG00000021548)	tstd3 (ENSELUG00000021558)	usp45 (ENSELUG00000021576)	ENSELUG00000021610	FAXC (ENSELUG00000021686)	fbxl4 (ENSELUG00000021753)	ENSELUG00000031675	pou3f2b (ENSELUG00000021783)	ENSELUG00000021822	mms22l (ENSELUG00000021852)	klhl32 (ENSELUG00000021919)	calhm6 (ENSELUG00000021932) ##20	CALHM5 (ENSELUG00000026396) ##20	ENSELUG00000033369	CALHM5 (ENSELUG00000021954) ##20	CALHM5 (ENSELUG00000021974) ##20	CLEC3B (ENSELUG00000021991)	ENSELUG00000022022	CNIH4 (ENSELUG00000022088)	WDR26 (ENSELUG00000022137)	ADCY3 (ENSELUG00000022209)	preb (ENSELUG00000022220)	lyplal1 (ENSELUG00000021027)	tgfb2 (ENSELUG00000024911)	rrp15 (ENSELUG00000011708)	ENSELUG00000030588	ENSELUG00000029571	vegfaa (ENSELUG00000022721)	ENSELUG00000025108	ENSELUG00000033167	gpatch3 (ENSELUG00000000963)
Otomorpha	ANCESTRAL SPECIES	62	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT00390000017627.a.a.b
Clupeiformes	ANCESTRAL SPECIES		ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.b	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT00390000017627.a.a.b
Denticle herring	MODERN SPECIES	15	SNAP91 (ENSDCDG00000029476)	prss35 (ENSDCDG00000029477)	me1 (ENSDCDG00000029489)	MCHR2 (ENSDCDG00000029650)	prdm13 (ENSDCDG00000029654)	zgc:172323 (ENSDCDG00000029658)	tstd3 (ENSDCDG00000029662)	usp45 (ENSDCDG00000029667)	ENSDCDG00000029968	coq3 (ENSDCDG00000029986)	FAXC (ENSDCDG00000029989)	fbxl4 (ENSDCDG00000029992)	POU3F2 (ENSDCDG00000029997)	mms22l (ENSDCDG00000030004)	klhl32 (ENSDCDG00000030016)	calhm5.1 (ENSDCDG00000030032) ##20	rwdd1 (ENSDCDG00000030034)	ENSDCDG00000030039	ENSDCDG00000030041	ENSDCDG00000030049	zufsp (ENSDCDG00000030068)	kpna5 (ENSDCDG00000030081)	gprc6a (ENSDCDG00000030379)	vegfaa (ENSDCDG00000030391)	NAGA (ENSDCDG00000000250)	rrp15 (ENSDCDG00000000294)	tgfb2 (ENSDCDG00000000320)	lyplal1 (ENSDCDG00000000332)	preb (ENSDCDG00000000347)	ADCY3 (ENSDCDG00000000395)	WDR26 (ENSDCDG00000000443)
Atlantic herring	MODERN SPECIES	2	zgc:172323 (ENSCHAG00000004564)	tstd3 (ENSCHAG00000004658)	usp45 (ENSCHAG00000004725)	pnisr (ENSCHAG00000006215)	coq3 (ENSCHAG00000006234)	FAXC (ENSCHAG00000006246)	fbxl4 (ENSCHAG00000006254)	ENSCHAG00000006269	ENSCHAG00000006309	mms22l (ENSCHAG00000006360)	klhl32 (ENSCHAG00000006812)	calhm6 (ENSCHAG00000006923) ##20	calhm6 (ENSCHAG00000007009) ##20	calhm6 (ENSCHAG00000007024) ##20	calhm6 (ENSCHAG00000007053) ##20	calhm5.1 (ENSCHAG00000007071) ##20	rwdd1 (ENSCHAG00000007081)	ENSCHAG00000007111	zufsp (ENSCHAG00000007261)	kpna5 (ENSCHAG00000007315)	gprc6a (ENSCHAG00000008145)	vegfaa (ENSCHAG00000008285)	NAGA (ENSCHAG00000008324)	ENSCHAG00000008588	ENSCHAG00000008602	ENSCHAG00000008624	ENSCHAG00000008662	ENSCHAG00000008686	ENSCHAG00000008732	lyplal1 (ENSCHAG00000008841)	tgfb2 (ENSCHAG00000008845)
Otophysi	ANCESTRAL SPECIES	56	ENSGT00390000000155.b.b	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT00390000001960	ENSGT00940000157390	ENSGT00940000159171	ENSGT00390000018031	ENSGT00940000156549.a.a	ENSGT00940000153634.b.a	ENSGT00950000182834.B	ENSGT00390000017627.a.a.b
Characiphysae	ANCESTRAL SPECIES	123	ENSGT00940000160528.a	ENSGT00940000158313.a.a	ENSGT00940000157046.E	ENSGT00940000156787	ENSGT00940000171486.A	ENSGT01050000244841.A.b.a.b.a.a.j	ENSGT01060000248664	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.h	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000164385.b	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00390000016421.b.b	ENSGT00950000183068.b.c.a	ENSGT00390000000155.b.b
Channel catfish	MODERN SPECIES	12	ENSIPUG00000005005	rabgef1l (ENSIPUG00000004981)	znf407 (ENSIPUG00000004963)	zadh2 (ENSIPUG00000004945)	TSHZ1 (ENSIPUG00000004927)	ZNF236 (ENSIPUG00000004905)	mbp (ENSIPUG00000004886)	ENSIPUG00000004873	GALR1 (ENSIPUG00000004857)	pnisr (ENSIPUG00000004847)	coq3 (ENSIPUG00000004833)	FAXC (ENSIPUG00000004829)	fbxl4 (ENSIPUG00000004812)	ENSIPUG00000004784	mms22l (ENSIPUG00000004760)	fam26e (ENSIPUG00000004741) ##20	ENSIPUG00000004730	ENSIPUG00000004723	ENSIPUG00000004718	ENSIPUG00000004704	ENSIPUG00000004697	stx1a (ENSIPUG00000004648)	bud23 (ENSIPUG00000004542)	DNAJC30 (ENSIPUG00000004524)	Sh2b2 (ENSIPUG00000004497)	cux1b (ENSIPUG00000004368)	mlrb (ENSIPUG00000004250)	ENSIPUG00000004218	srprb (ENSIPUG00000004177)	WDR53 (ENSIPUG00000004169)	neu4 (ENSIPUG00000004156)
Characiphysae_b	ANCESTRAL SPECIES	107	ENSGT00940000160528.a	ENSGT00940000158313.a.a	ENSGT00940000157046.E	ENSGT00940000156787	ENSGT00940000171486.A	ENSGT01050000244841.A.b.a.b.a.a.j	ENSGT01060000248664	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.h	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00940000164385.b	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b	ENSGT00390000016421.b.b	ENSGT00950000183068.b.c.a	ENSGT00390000000155.b.b
Electric eel	MODERN SPECIES	186														mms22l (ENSEEEG00000009874)	klhl32 (ENSEEEG00000009885)	calhm5.1 (ENSEEEG00000009888) ##20	rwdd1 (ENSEEEG00000009890)	ENSEEEG00000009895	zufsp (ENSEEEG00000009897)	kpna5 (ENSEEEG00000009953)	gprc6a (ENSEEEG00000010466)	vegfaa (ENSEEEG00000010467)	NAGA (ENSEEEG00000010469)	rhbdl2 (ENSEEEG00000010472)	akirin1 (ENSEEEG00000010473)	cnr2 (ENSEEEG00000010474)	pnrc2 (ENSEEEG00000010475)	ENSEEEG00000010477	ENSEEEG00000010478	ENSEEEG00000010483	ENSEEEG00000010484
Characoidei	ANCESTRAL SPECIES	193		ENSGT00940000156446	ENSGT00920000149172	ENSGT00950000183051.a.a.b	ENSGT00940000156787	ENSGT00940000171486.A	ENSGT01050000244841.A.b.a.b.a.a.j	ENSGT01060000248664	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.h	ENSGT00940000155184	ENSGT00940000164385.b	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00390000008751.a.fb	ENSGT01090000260070.C.a	ENSGT00940000159442	ENSGT00940000158787	ENSGT01060000248564.a.b	ENSGT00530000063881.a.b
Mexicana tetra	MODERN SPECIES	24	ENSAMXG00000040828	PTGR3 (ENSAMXG00000001839)	TSHZ1 (ENSAMXG00000032425)	ENSAMXG00000034873	ENSAMXG00000033001	ENSAMXG00000039889	ENSAMXG00000032254	GALR1 (ENSAMXG00000001883)	ENSAMXG00000008502	coq3 (ENSAMXG00000008641)	FAXC (ENSAMXG00000008654)	fbxl4 (ENSAMXG00000008664)	ENSAMXG00000039835	mms22l (ENSAMXG00000008792)	klhl32 (ENSAMXG00000009056)	calhm5.1 (ENSAMXG00000032177) ##20	rwdd1 (ENSAMXG00000035253)	zufsp (ENSAMXG00000009217)	kpna5 (ENSAMXG00000009247)	gprc6a (ENSAMXG00000035245)	ENSAMXG00000038997	vegfaa (ENSAMXG00000009508)	NAGA (ENSAMXG00000009532)	ENSAMXG00000009538	rhbdl2 (ENSAMXG00000039701)	ENSAMXG00000039682	akirin1 (ENSAMXG00000009569)	ENSAMXG00000031738	cnr2 (ENSAMXG00000041379)	pnrc2 (ENSAMXG00000024879)	ENSAMXG00000043990
Red-bellied piranha	MODERN SPECIES	1838																calhm5.1 (ENSPNAG00000002427) ##20	rwdd1 (ENSPNAG00000002425)
Cyprinoidei	ANCESTRAL SPECIES	60	ENSGT00950000183134.c.a.b	ENSGT00940000154272.A.a	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000164601	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.p.g.a	ENSGT00940000155184	ENSGT00940000162208.`c.a	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000161197	ENSGT00390000014743.j	ENSGT00550000075069	ENSGT00940000154244.B	ENSGT00510000048131	ENSGT01050000244894.a.a.a.a	ENSGT01030000234564.a.b	ENSGT00440000033697.bb.a	ENSGT00440000033697.bb.b.a	ENSGT00440000033697.bb.b.b
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	317						ENSGT00940000164601	ENSGT00940000157719.d	ENSGT00730000111138.a	ENSGT00390000007284.d	ENSGT00950000182919.A.p.g.a.a	ENSGT00940000155184.j	ENSGT00940000162208.`c.a.c	ENSGT00390000011769.a	ENSGT00940000157179.b	ENSGT01030000234610.a.a.eb ##20	ENSGT01030000234610.a.b.i ##20	ENSGT00390000009168.c	ENSGT00940000156772.a.b	ENSGT00940000166924.d	ENSGT01050000244950.a.a.b.h	ENSGT00940000158416.q.a.a	ENSGT00940000161197.h	ENSGT00390000014743.j.b	ENSGT00550000075069.n	ENSGT00940000154244.B	ENSGT00510000048131	ENSGT01050000244894.a.a.a.a.c	ENSGT01030000234564.a.b.n	ENSGT00440000033697.bb.a.a	ENSGT00940000157871.h.a.b	ENSGT00940000165997.b.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	612											fbxl4 (ENSCARG00000059039)	pou3f2b (ENSCARG00000059031)	ENSCARG00000059023	klhl32 (ENSCARG00000058939)	calhm6 (ENSCARG00000058920) ##20	CALHM5 (ENSCARG00000058893) ##20	rwdd1 (ENSCARG00000058873)	ENSCARG00000058864	zufsp (ENSCARG00000058820)	kpna5 (ENSCARG00000058527)	gprc6a (ENSCARG00000058497)	ENSCARG00000058491	ENSCARG00000058442
Goldfish	MODERN SPECIES	2052													ENSCARG00000062811	klhl32 (ENSCARG00000062722)	calhm6 (ENSCARG00000062710) ##20	CALHM5 (ENSCARG00000062697) ##20
Cyprininae_a	ANCESTRAL SPECIES	165	ENSGT00390000000155.b.b.a	ENSGT00950000183134.c.a.b.f.a	ENSGT00940000154272.A.a	ENSGT00940000160200.f	ENSGT00940000164536.a.b.d	ENSGT00940000163155.e	ENSGT00940000157719.d	ENSGT00730000111138.a	ENSGT00390000007284.d	ENSGT00950000182919.A.p.g.a.a	ENSGT00940000155184.j	ENSGT00940000162208.`c.a.c	ENSGT00390000011769.a	ENSGT00940000157179.b	ENSGT01030000234610.a.a.eb ##20	ENSGT01030000234610.a.b.i ##20	ENSGT00390000009168.c	ENSGT00940000156772.a.b	ENSGT00940000166924.d	ENSGT01050000244950.a.a.b.h	ENSGT00940000158416.q.a.a	ENSGT00940000161197.h	ENSGT00390000014743.j.b	ENSGT00550000075069.n	ENSGT00510000048131.s	ENSGT01050000244894.a.a.a.a.c	ENSGT01030000234564.a.b.n	ENSGT00440000033697.bb.a.a	ENSGT00940000157871.h.a.b	ENSGT00940000165997.b.b	ENSGT00550000074829.hc
Common carp reference	MODERN SPECIES	2	prss35 (ENSCCRG00000055832)	ME1 (ENSCCRG00000077509)	ENSCCRG00000003478	ENSCCRG00000011754	prdm13 (ENSCCRG00000013788)	zgc:172323 (ENSCCRG00000011751)	usp45 (ENSCCRG00000011767)	pnisr (ENSCCRG00000011822)	coq3 (ENSCCRG00000071542)	fbxl4 (ENSCCRG00000017447)	pou3f2b (ENSCCRG00000055463)	ENSCCRG00000005004	mms22l (ENSCCRG00000065849)	klhl32 (ENSCCRG00000054058)	calhm6 (ENSCCRG00000009209) ##20	CALHM5 (ENSCCRG00000078067) ##20	rwdd1 (ENSCCRG00000009199)	zufsp (ENSCCRG00000009225)	kpna5 (ENSCCRG00000008058)	gprc6a (ENSCCRG00000076189)	ENSCCRG00000055659	cnot3a (ENSCCRG00000009050)	prpf31 (ENSCCRG00000051591)	ENSCCRG00000074216	leng1 (ENSCCRG00000066909)	ENSCCRG00000033289	mboat7 (ENSCCRG00000033279)	ENSCCRG00000033267	styk1b (ENSCCRG00000041931)	phc1 (ENSCCRG00000041922)	ENSCCRG00000074483
Golden-line barbel	MODERN SPECIES	458						prdm13 (ENSSGRG00000012496)	tstd3 (ENSSGRG00000012497)	usp45 (ENSSGRG00000012504)	pnisr (ENSSGRG00000012745)	FAXC (ENSSGRG00000012874)	fbxl4 (ENSSGRG00000012875)	pou3f2b (ENSSGRG00000012899)	mms22l (ENSSGRG00000012902)	klhl32 (ENSSGRG00000012946)	calhm6 (ENSSGRG00000012948) ##20	CALHM5 (ENSSGRG00000012949) ##20	rwdd1 (ENSSGRG00000012954)	ENSSGRG00000012991	zufsp (ENSSGRG00000013106)	kpna5 (ENSSGRG00000013114)	gprc6a (ENSSGRG00000013192)	ENSSGRG00000013193	cnot3a (ENSSGRG00000013205)	prpf31 (ENSSGRG00000013852)	ENSSGRG00000014113	leng1 (ENSSGRG00000014114)	ENSSGRG00000014116	mboat7 (ENSSGRG00000014119)	ENSSGRG00000014120	ENSSGRG00000014161	styk1b (ENSSGRG00000014162)
Cyprininae	ANCESTRAL SPECIES	28	ENSGT00390000000155.b.b.b	ENSGT00950000183134.c.a.b.e	ENSGT00940000154272.A.b	ENSGT00940000160200.e	ENSGT00940000164536.a.b.c	ENSGT00940000163155.f	ENSGT00940000157719.c	ENSGT00730000111138.b	ENSGT00390000007284.c	ENSGT00950000182919.A.p.g.a.b	ENSGT00940000155184.i	ENSGT00940000162208.`c.a.d	ENSGT00390000011769.b	ENSGT00940000157179.a	ENSGT01030000234610.a.a.db ##20	ENSGT01030000234610.a.b.j ##20	ENSGT00390000009168.d	ENSGT00940000156772.a.a	ENSGT00940000166924.c	ENSGT01050000244950.a.a.b.g	ENSGT00940000158416.q.a.b	ENSGT00940000161197.g	ENSGT00390000014743.j.a	ENSGT00550000075069.m	ENSGT00940000177689	ENSGT01050000244894.a.a.a.a.d	ENSGT01030000234564.a.b.m	ENSGT00440000033697.bb.a.b	ENSGT00440000033697.bb.b.a	ENSGT00440000033697.bb.b.b	ENSGT00940000157871.h.a.a
Cyprininae_a	ANCESTRAL SPECIES	7	ENSGT00390000000155.b.b.b	ENSGT00950000183134.c.a.b.e	ENSGT00940000154272.A.b	ENSGT00940000160200.e	ENSGT00940000164536.a.b.c	ENSGT00940000163155.f	ENSGT00940000157719.c	ENSGT00730000111138.b	ENSGT00390000007284.c	ENSGT00950000182919.A.p.g.a.b	ENSGT00940000155184.i	ENSGT00940000162208.`c.a.d	ENSGT00390000011769.b	ENSGT00940000157179.a	ENSGT01030000234610.a.a.db ##20	ENSGT01030000234610.a.b.j ##20	ENSGT00390000009168.d	ENSGT00940000156772.a.a	ENSGT00940000166924.c	ENSGT01050000244950.a.a.b.g	ENSGT00940000158416.q.a.b	ENSGT00940000161197.g	ENSGT00390000014743.j.a	ENSGT00550000075069.m	ENSGT00940000154244.B.f	ENSGT00510000048131.t	ENSGT00940000154244.B.e	ENSGT01050000244894.a.a.a.a.d	ENSGT01030000234564.a.b.m	ENSGT00440000033697.bb.a.b	ENSGT00440000033697.bb.b.a
Golden-line barbel	MODERN SPECIES	95	DOP1A (ENSSGRG00000040832)	prss35 (ENSSGRG00000041042)	ME1 (ENSSGRG00000041051)	MCHR2 (ENSSGRG00000041140)	prdm13 (ENSSGRG00000041141)	zgc:172323 (ENSSGRG00000041142)	tstd3 (ENSSGRG00000041145)	usp45 (ENSSGRG00000041148)	pnisr (ENSSGRG00000041161)	coq3 (ENSSGRG00000041163)	FAXC (ENSSGRG00000041166)	fbxl4 (ENSSGRG00000041167)	pou3f2b (ENSSGRG00000041194)	mms22l (ENSSGRG00000041209)	klhl32 (ENSSGRG00000041537)	CALHM5 (ENSSGRG00000041540) ##20	rwdd1 (ENSSGRG00000041542)	ENSSGRG00000041572	zufsp (ENSSGRG00000041574)	kpna5 (ENSSGRG00000041587)	gprc6a (ENSSGRG00000042409)	ENSSGRG00000042410	ENSSGRG00000042412	cnot3a (ENSSGRG00000042416)	prpf31 (ENSSGRG00000042503)	ENSSGRG00000042803	leng1 (ENSSGRG00000042804)	mboat7 (ENSSGRG00000042805)	ENSSGRG00000000101	ENSSGRG00000000175	gstk4 (ENSSGRG00000000215)
Common carp reference	MODERN SPECIES	47	ENSCCRG00000006887	SNAP91 (ENSCCRG00000071478)	prss35 (ENSCCRG00000003447)	ME1 (ENSCCRG00000003468)	usp45 (ENSCCRG00000064928)	ENSCCRG00000047397	ENSCCRG00000080709	pnisr (ENSCCRG00000011870)	coq3 (ENSCCRG00000011832)	FAXC (ENSCCRG00000011835)	fbxl4 (ENSCCRG00000023871)	pou3f2b (ENSCCRG00000063906)	mms22l (ENSCCRG00000054586)	klhl32 (ENSCCRG00000009098)	calhm6 (ENSCCRG00000058883) ##20	CALHM5 (ENSCCRG00000064134) ##20	rwdd1 (ENSCCRG00000057387)	ENSCCRG00000080219	zufsp (ENSCCRG00000011741)	kpna5 (ENSCCRG00000009259)	gprc6a (ENSCCRG00000011717)	ENSCCRG00000054359	cnot3a (ENSCCRG00000042028)	prpf31 (ENSCCRG00000009069)	ENSCCRG00000073669	TMC4 (ENSCCRG00000055866)	mboat7 (ENSCCRG00000041961)	ENSCCRG00000067077	ENSCCRG00000041955	ENSCCRG00000041943	styk1b (ENSCCRG00000005240)
Goldfish	MODERN SPECIES	7	SNAP91 (ENSCARG00000013226)	ENSCARG00000013240	prss35 (ENSCARG00000013246)	ME1 (ENSCARG00000013332)	prdm13 (ENSCARG00000015922)	zgc:172323 (ENSCARG00000015927)	usp45 (ENSCARG00000015957)	pnisr (ENSCARG00000016342)	coq3 (ENSCARG00000016363)	FAXC (ENSCARG00000016372)	fbxl4 (ENSCARG00000016376)	pou3f2b (ENSCARG00000016383)	mms22l (ENSCARG00000016401)	klhl32 (ENSCARG00000016441)	calhm6 (ENSCARG00000014063) ##20	CALHM5 (ENSCARG00000014068) ##20	rwdd1 (ENSCARG00000014073)	zufsp (ENSCARG00000014098)	kpna5 (ENSCARG00000014123)	gprc6a (ENSCARG00000014230)	ENSCARG00000014237	cnot3a (ENSCARG00000014261)	ENSCARG00000014333	TMC4 (ENSCARG00000014344)	mboat7 (ENSCARG00000014367)	gstk4 (ENSCARG00000014381)	ENSCARG00000014422	styk1b (ENSCARG00000014432)	phc1 (ENSCARG00000014447)	ENSCARG00000014469	rps9 (ENSCARG00000014474)
Zebrafish	DUPLICATION
Zebrafish	MODERN SPECIES	7	me1 (ENSDARG00000053215)	MCHR2 (ENSDARG00000007842)	prdm13 (ENSDARG00000078701)	zgc:172323 (ENSDARG00000053201)	tstd3 (ENSDARG00000087048)	usp45 (ENSDARG00000075013)	pnisr (ENSDARG00000069855)	coq3 (ENSDARG00000069857)	FAXC (ENSDARG00000078981)	fbxl4 (ENSDARG00000026941)	pou3f2b (ENSDARG00000076262)	mms22l (ENSDARG00000074691)	klhl32 (ENSDARG00000003576)	calhm6 (ENSDARG00000041980) ##20	calhm5.1 (ENSDARG00000074947) ##20	CALHM5 (ENSDARG00000012726) ##20	rwdd1 (ENSDARG00000015930)	zufsp (ENSDARG00000059983)	kpna5 (ENSDARG00000042030)	gprc6a (ENSDARG00000005371)	ENSDARG00000069893	cnot3a (ENSDARG00000007135)	ENSDARG00000092180	prpf31 (ENSDARG00000095904)	ENSDARG00000029114	leng1 (ENSDARG00000037633)	ENSDARG00000031757	mboat7 (ENSDARG00000033436)	gstk1 (ENSDARG00000056510)	gstk4 (ENSDARG00000092052)	ENSDARG00000093119
Zebrafish	MODERN SPECIES	7	prss35 (ENSDARG00000100691)	me1 (ENSDARG00000053215)	MCHR2 (ENSDARG00000007842)	prdm13 (ENSDARG00000078701)	zgc:172323 (ENSDARG00000053201)	tstd3 (ENSDARG00000087048)	usp45 (ENSDARG00000075013)	pnisr (ENSDARG00000069855)	coq3 (ENSDARG00000069857)	FAXC (ENSDARG00000078981)	fbxl4 (ENSDARG00000026941)	pou3f2b (ENSDARG00000076262)	mms22l (ENSDARG00000074691)	klhl32 (ENSDARG00000003576)	calhm6 (ENSDARG00000041980) ##20	calhm5.1 (ENSDARG00000074947) ##20	CALHM5 (ENSDARG00000012726) ##20	rwdd1 (ENSDARG00000015930)	zufsp (ENSDARG00000059983)	kpna5 (ENSDARG00000042030)	gprc6a (ENSDARG00000005371)	ENSDARG00000069893	cnot3a (ENSDARG00000007135)	ENSDARG00000092180	prpf31 (ENSDARG00000095904)	ENSDARG00000029114	leng1 (ENSDARG00000037633)	ENSDARG00000031757	mboat7 (ENSDARG00000033436)	gstk1 (ENSDARG00000056510)	gstk4 (ENSDARG00000092052)
Osteoglossiformes	ANCESTRAL SPECIES	130	ENSGT00950000183134.c.a.b	ENSGT00940000160200	ENSGT00940000164536.a.b	ENSGT00940000163155	ENSGT00940000157719	ENSGT00730000111138	ENSGT00390000007284	ENSGT00950000182919.A.o	ENSGT00940000155184	ENSGT00940000164385.a.b	ENSGT00940000164385.b	ENSGT00940000166515	ENSGT00390000011769	ENSGT00940000157179	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.a	ENSGT00940000166924	ENSGT01050000244950.a.a.b	ENSGT00940000158416.q.a	ENSGT00940000157284.cb.a	ENSGT00950000182834.B	ENSGT00940000153634.b.b.b	ENSGT00390000018031	ENSGT00940000159171
Asian bonytongue	MODERN SPECIES	23	PRSS35 (ENSSFOG00015011467)	me1 (ENSSFOG00015011400)	prdm13 (ENSSFOG00015011389)	zgc:172323 (ENSSFOG00015011336)	tstd3 (ENSSFOG00015011325)	usp45 (ENSSFOG00015011314)	pnisr (ENSSFOG00015011276)	coq3 (ENSSFOG00015011267)	FAXC (ENSSFOG00015024969)	fbxl4 (ENSSFOG00015011222)	ENSSFOG00015027357	ENSSFOG00015011201	mms22l (ENSSFOG00015011179)	klhl32 (ENSSFOG00015011149)	calhm6 (ENSSFOG00015031263) ##20	calhm5.1 (ENSSFOG00015011119) ##20	rwdd1 (ENSSFOG00015011093)	zufsp (ENSSFOG00015028204)	ENSSFOG00015029312	rwdd1 (ENSSFOG00015026615)	ENSSFOG00015027676	zufsp (ENSSFOG00015025959)	kpna5 (ENSSFOG00015011018)	gprc6a (ENSSFOG00015010941)	vegfaa (ENSSFOG00015010876)	CNIH4 (ENSSFOG00015029508)	wdr26b (ENSSFOG00015010778)	preb (ENSSFOG00015010702)	lyplal1 (ENSSFOG00015010749)	ENSSFOG00015031838	ENSSFOG00015010684
P. kingsleyae	MODERN SPECIES	135	PRSS35 (ENSPKIG00000022787)	me1 (ENSPKIG00000022798)	prdm13 (ENSPKIG00000022824)	zgc:172323 (ENSPKIG00000022840)	tstd3 (ENSPKIG00000022851)	usp45 (ENSPKIG00000022877)	ENSPKIG00000022936	coq3 (ENSPKIG00000022973)	FAXC (ENSPKIG00000022985)	fbxl4 (ENSPKIG00000022995)	ENSPKIG00000023016	mms22l (ENSPKIG00000025598)	klhl32 (ENSPKIG00000025636)	calhm6 (ENSPKIG00000025629) ##20	calhm6 (ENSPKIG00000025663) ##20	calhm5.1 (ENSPKIG00000025628) ##20	rwdd1 (ENSPKIG00000025660)	ENSPKIG00000025625	zufsp (ENSPKIG00000025593)	kpna5 (ENSPKIG00000025689)	vegfaa (ENSPKIG00000025613)	CNIH4 (ENSPKIG00000025684)	wdr26b (ENSPKIG00000000004)	rrp15 (ENSPKIG00000000018)	ENSPKIG00000000025	ENSPKIG00000000033	etfb (ENSPKIG00000000040)	USF2 (ENSPKIG00000000057)	ENSPKIG00000000073	iglon5 (ENSPKIG00000000081)	ENSPKIG00000000095
Spotted gar	MODERN SPECIES	647	MCHR2 (ENSLOCG00000017082)	prdm13 (ENSLOCG00000017084)	ngs (ENSLOCG00000017085)	ccnc (ENSLOCG00000017086)	tstd3 (ENSLOCG00000017087)	usp45 (ENSLOCG00000017089)	ENSLOCG00000017090	coq3 (ENSLOCG00000017096)	FAXC (ENSLOCG00000017097)	fbxl4 (ENSLOCG00000017099)	pou3f2b (ENSLOCG00000017875)	ENSLOCG00000017102	mms22l (ENSLOCG00000017105)	klhl32 (ENSLOCG00000017108)	calhm6 (ENSLOCG00000017112) ##20	calhm5.1 (ENSLOCG00000017113) ##20	rwdd1 (ENSLOCG00000017114)	ENSLOCG00000017120	ENSLOCG00000017122	ENSLOCG00000017124	ZUP1 (ENSLOCG00000017125)	kpna5 (ENSLOCG00000017126)	FAM162B (ENSLOCG00000017127)	ENSLOCG00000017128	gprc6a (ENSLOCG00000017129)	ENSLOCG00000017131	rfx6 (ENSLOCG00000017133)	vgll2a (ENSLOCG00000017136)	ROS1 (ENSLOCG00000017138)	dcbld1 (ENSLOCG00000017143)	gopc (ENSLOCG00000017146)
Reedfish	MODERN SPECIES	11	prdm13 (ENSECRG00000004135)	ngs (ENSECRG00000004123)	ccnc (ENSECRG00000004082)	ENSECRG00000004062	usp45 (ENSECRG00000003823)	ENSECRG00000003775	coq3 (ENSECRG00000003756)	FAXC (ENSECRG00000003750)	fbxl4 (ENSECRG00000003742)	pou3f2b (ENSECRG00000003737)	ENSECRG00000003733	ENSECRG00000003729	mms22l (ENSECRG00000003698)	klhl32 (ENSECRG00000003614)	calhm6 (ENSECRG00000003558) ##20	calhm5.1 (ENSECRG00000003548) ##20	CALHM4 (ENSECRG00000003540) ##20	rwdd1 (ENSECRG00000003523)	ENSECRG00000003509	ENSECRG00000003501	ENSECRG00000003481	ENSECRG00000003462	ZUP1 (ENSECRG00000003431)	kpna5 (ENSECRG00000003395)	gprc6a (ENSECRG00000003356)	ENSECRG00000003254	ENSECRG00000003214	ENSECRG00000003202	ENSECRG00000003119	rfx6 (ENSECRG00000003016)	vgll2a (ENSECRG00000002955)
Sarcopterygii	ANCESTRAL SPECIES	16	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Coelacanth	MODERN SPECIES	3363														CALHM6 (ENSLACG00000000689) ##20	TRAPPC3L (ENSLACG00000001479)	CALHM5 (ENSLACG00000002146) ##20	RWDD1 (ENSLACG00000003956)
Tetrapoda	ANCESTRAL SPECIES	4	ENSGT00940000170463	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Anura	ANCESTRAL SPECIES	8	ENSGT00530000063320.B	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT00940000166171.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Frog	MODERN SPECIES	5	ENSXETG00000049076	lama4 (ENSXETG00000007336)	marcks (ENSXETG00000027751)	hdac2 (ENSXETG00000007339)	hs3st5 (ENSXETG00000020230)	ENSXETG00000048366	ENSXETG00000042926	ENSXETG00000043493	ENSXETG00000044597	cfap206 (ENSXETG00000006172)	frk (ENSXETG00000006166)	col10a1 (ENSXETG00000033031)	nt5dc1 (ENSXETG00000034706)	dse (ENSXETG00000032776)	calhm6 (ENSXETG00000033644) ##20	calhm5 (ENSXETG00000044076) ##20	trappc3l (ENSXETG00000031870)	calhm4 (ENSXETG00000030384) ##20	birc7 (ENSXETG00000015707)	rwdd1 (ENSXETG00000014077)	XB5843062 [provisional:sult3a1] (ENSXETG00000030056)	zup1 (ENSXETG00000014074)	ENSXETG00000046674	fam162b (ENSXETG00000036478)	XB991396 [provisional:gprc6a] (ENSXETG00000032107)	gprc6a (ENSXETG00000032935)	ENSXETG00000049478	rfx6 (ENSXETG00000033810)	vgll2 (ENSXETG00000014041)	ros1 (ENSXETG00000037537)	ENSXETG00000041661
Leishan spiny toad	MODERN SPECIES	7	ENSLLEG00000017379	MARCKS (ENSLLEG00000017344)	ENSLLEG00000017300	ENSLLEG00000017275	HDAC2 (ENSLLEG00000016537)	ENSLLEG00000016423	HS3ST5 (ENSLLEG00000016380)	ENSLLEG00000016355	ENSLLEG00000016334	ENSLLEG00000016271	FRK (ENSLLEG00000016095)	ENSLLEG00000016041	NT5DC1 (ENSLLEG00000015951)	DSE (ENSLLEG00000015907)	CALHM6 (ENSLLEG00000015877) ##20	CALHM5 (ENSLLEG00000015832) ##20	TRAPPC3L (ENSLLEG00000015749)	CALHM4 (ENSLLEG00000015712) ##20	RWDD1 (ENSLLEG00000015539)	ENSLLEG00000015309	ENSLLEG00000015174	ZUP1 (ENSLLEG00000014981)	ENSLLEG00000014949	FAM162B (ENSLLEG00000014905)	GPRC6A (ENSLLEG00000014835)	ENSLLEG00000014772	ENSLLEG00000014686	ENSLLEG00000014658	ENSLLEG00000014601	ENSLLEG00000014531	ENSLLEG00000026189
Amniota	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Sauria	ANCESTRAL SPECIES	1	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Lepidosauria	ANCESTRAL SPECIES		ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
tuatara	MODERN SPECIES	968											FRK (ENSSPUG00000002986)	ENSSPUG00000003042	COL10A1 (ENSSPUG00000003085)	DSE (ENSSPUG00000003100)	TRAPPC3L (ENSSPUG00000003108)	CALHM5 (ENSSPUG00000003123) ##20	ENSSPUG00000003132	ENSSPUG00000003140
Archelosauria	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Archosauria	ANCESTRAL SPECIES	3	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Aves	ANCESTRAL SPECIES	10	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Neognathae	ANCESTRAL SPECIES	2	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Neognathae_b	ANCESTRAL SPECIES	1	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Passeriformes	ANCESTRAL SPECIES	2	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Great tit	MODERN SPECIES	22	REV3L (ENSPMJG00000015286)	ENSPMJG00000015285	FYN (ENSPMJG00000015284)	CCN6 (ENSPMJG00000015281)	TUBE1 (ENSPMJG00000015280)	LAMA4 (ENSPMJG00000014201)	MARCKS (ENSPMJG00000014178)	HDAC2 (ENSPMJG00000014173)	HS3ST5 (ENSPMJG00000014171)	FRK (ENSPMJG00000014147)	ENSPMJG00000014145	NT5DC1 (ENSPMJG00000014143)	DSE (ENSPMJG00000014142)	CALHM6 (ENSPMJG00000014108) ##20	TRAPPC3L (ENSPMJG00000014105)	CALHM5 (ENSPMJG00000014102) ##20	CALHM4 (ENSPMJG00000014100) ##20	RWDD1 (ENSPMJG00000014098)	ZUP1 (ENSPMJG00000014097)	KPNA5 (ENSPMJG00000014094)	FAM162B (ENSPMJG00000014092)	GPRC6A (ENSPMJG00000014090)	RFX6 (ENSPMJG00000014077)	VGLL2 (ENSPMJG00000014058)	ROS1 (ENSPMJG00000014055)	DCBLD1 (ENSPMJG00000014053)	GOPC (ENSPMJG00000014050)	ENSPMJG00000014049	NUS1 (ENSPMJG00000014047)	ENSPMJG00000014037	SLC35F1 (ENSPMJG00000014036)
Passeriformes_d	ANCESTRAL SPECIES	2	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00390000002403
Flycatcher	MODERN SPECIES	21	ENSFALG00000010853	FYN (ENSFALG00000010875)	CCN6 (ENSFALG00000028771)	TUBE1 (ENSFALG00000010959)	LAMA4 (ENSFALG00000010965)	HDAC2 (ENSFALG00000010975)	HS3ST5 (ENSFALG00000010977)	FRK (ENSFALG00000010983)	ENSFALG00000028957	ENSFALG00000010995	ENSFALG00000023706	DSE (ENSFALG00000011001)	ENSFALG00000010999 ##20	ENSFALG00000011005 ##20	TRAPPC3L (ENSFALG00000011010)	CALHM5 (ENSFALG00000023025) ##20	CALHM4 (ENSFALG00000011017) ##20	ENSFALG00000028887	RWDD1 (ENSFALG00000024864)	ZUP1 (ENSFALG00000011032)	KPNA5 (ENSFALG00000011039)	FAM162B (ENSFALG00000011046)	GPRC6A (ENSFALG00000011050)	RFX6 (ENSFALG00000011057)	VGLL2 (ENSFALG00000011071)	ROS1 (ENSFALG00000011085)	DCBLD1 (ENSFALG00000011109)	GOPC (ENSFALG00000011117)	ENSFALG00000011131	NUS1 (ENSFALG00000022865)	SLC35F1 (ENSFALG00000011158)
Passeriformes_g	ANCESTRAL SPECIES	1	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Passeroidea	ANCESTRAL SPECIES		ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Common canary	MODERN SPECIES	1	SLC16A10 (ENSSCAG00000000026)	MFSD4B (ENSSCAG00000000025)	REV3L (ENSSCAG00000000019)	ENSSCAG00000000009	FYN (ENSSCAG00000000004)	CCN6 (ENSSCAG00000014994)	TUBE1 (ENSSCAG00000014989)	LAMA4 (ENSSCAG00000014967)	HDAC2 (ENSSCAG00000014953)	HS3ST5 (ENSSCAG00000014948)	FRK (ENSSCAG00000014876)	ENSSCAG00000014847	NT5DC1 (ENSSCAG00000014841)	DSE (ENSSCAG00000014836)	CALHM6 (ENSSCAG00000014832) ##20	CALHM5 (ENSSCAG00000014827) ##20	TRAPPC3L (ENSSCAG00000014820)	CALHM4 (ENSSCAG00000014792) ##20	RWDD1 (ENSSCAG00000014762)	ZUP1 (ENSSCAG00000014748)	KPNA5 (ENSSCAG00000014738)	FAM162B (ENSSCAG00000014732)	GPRC6A (ENSSCAG00000014730)	RFX6 (ENSSCAG00000014718)	VGLL2 (ENSSCAG00000014711)	ROS1 (ENSSCAG00000014691)	DCBLD1 (ENSSCAG00000014671)	GOPC (ENSSCAG00000014666)	ENSSCAG00000014659	NUS1 (ENSSCAG00000014650)	SLC35F1 (ENSSCAG00000014641)
Zebra finch	MODERN SPECIES	23	FYN (ENSTGUG00000011998)	CCN6 (ENSTGUG00000024640)	ENSTGUG00000011997	TUBE1 (ENSTGUG00000011993)	LAMA4 (ENSTGUG00000011973)	MARCKS (ENSTGUG00000026006)	HDAC2 (ENSTGUG00000011964)	HS3ST5 (ENSTGUG00000011963)	ENSTGUG00000028765	FRK (ENSTGUG00000011957)	NT5DC1 (ENSTGUG00000011946)	ENSTGUG00000011952	DSE (ENSTGUG00000011943)	CALHM6 (ENSTGUG00000011941) ##20	TRAPPC3L (ENSTGUG00000011937)	CALHM5 (ENSTGUG00000011940) ##20	RWDD1 (ENSTGUG00000011932)	ZUP1 (ENSTGUG00000011930)	KPNA5 (ENSTGUG00000011928)	FAM162B (ENSTGUG00000024738)	GPRC6A (ENSTGUG00000011925)	RFX6 (ENSTGUG00000011924)	VGLL2 (ENSTGUG00000011922)	ROS1 (ENSTGUG00000011909)	DCBLD1 (ENSTGUG00000011905)	GOPC (ENSTGUG00000011901)	ENSTGUG00000011898	NUS1 (ENSTGUG00000011892)	SLC35F1 (ENSTGUG00000028242)	CEP85L (ENSTGUG00000011879)	PLN (ENSTGUG00000022055)
Medium ground finch	MODERN SPECIES	9	ENSGFOG00000002969	FYN (ENSGFOG00000002985)	CCN6 (ENSGFOG00000003008)	TUBE1 (ENSGFOG00000003060)	LAMA4 (ENSGFOG00000003411)	ENSGFOG00000007518	HDAC2 (ENSGFOG00000007522)	HS3ST5 (ENSGFOG00000007531)	FRK (ENSGFOG00000007538)	NT5DC1 (ENSGFOG00000007552)	ENSGFOG00000007579	ENSGFOG00000007583	DSE (ENSGFOG00000007589)	CALHM6 (ENSGFOG00000007593) ##20	TRAPPC3L (ENSGFOG00000007597)	CALHM5 (ENSGFOG00000007606) ##20	CALHM4 (ENSGFOG00000007609) ##20	RWDD1 (ENSGFOG00000007640)	ZUP1 (ENSGFOG00000007669)	KPNA5 (ENSGFOG00000007745)	FAM162B (ENSGFOG00000007757)	GPRC6A (ENSGFOG00000007765)	RFX6 (ENSGFOG00000007776)	VGLL2 (ENSGFOG00000007798)	ROS1 (ENSGFOG00000007810)	DCBLD1 (ENSGFOG00000007857)	GOPC (ENSGFOG00000007881)	ENSGFOG00000007920	NUS1 (ENSGFOG00000007937)	SLC35F1 (ENSGFOG00000007946)	CEP85L (ENSGFOG00000007957)
Neognathae_c	ANCESTRAL SPECIES	5				ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Kakapo	MODERN SPECIES	23	ENSSHBG00005017288	ENSSHBG00005017283	FYN (ENSSHBG00005017280)	CCN6 (ENSSHBG00005017277)	ENSSHBG00005017274	TUBE1 (ENSSHBG00005017269)	LAMA4 (ENSSHBG00005004609)	MARCKS (ENSSHBG00005003980)	HDAC2 (ENSSHBG00005003956)	HS3ST5 (ENSSHBG00005003938)	FRK (ENSSHBG00005003903)	ENSSHBG00005003874	NT5DC1 (ENSSHBG00005003851)	DSE (ENSSHBG00005003820)	CALHM6 (ENSSHBG00005003805) ##20	CALHM5 (ENSSHBG00005003799) ##20	TRAPPC3L (ENSSHBG00005003784)	CALHM4 (ENSSHBG00005003749) ##20	RWDD1 (ENSSHBG00005003718)	ZUP1 (ENSSHBG00005003702)	KPNA5 (ENSSHBG00005003578)	FAM162B (ENSSHBG00005003515)	GPRC6A (ENSSHBG00005003502)	RFX6 (ENSSHBG00005003482)	VGLL2 (ENSSHBG00005003458)	ROS1 (ENSSHBG00005003030)	DCBLD1 (ENSSHBG00005002782)	GOPC (ENSSHBG00005002757)	ENSSHBG00005002743	NUS1 (ENSSHBG00005002724)	ENSSHBG00005002709
Golden eagle	MODERN SPECIES	11	FYN (ENSACCG00020006370)	CCN6 (ENSACCG00020006390)	ENSACCG00020006395	ENSACCG00020006403	ENSACCG00020006409	LAMA4 (ENSACCG00020006424)	MARCKS (ENSACCG00020006456)	HDAC2 (ENSACCG00020006464)	HS3ST5 (ENSACCG00020006476)	FRK (ENSACCG00020006485)	NT5DC1 (ENSACCG00020006495)	ENSACCG00020006507	DSE (ENSACCG00020006515)	ENSACCG00020006525 ##20	TRAPPC3L (ENSACCG00020006542)	CALHM5 (ENSACCG00020006553) ##20	CALHM4 (ENSACCG00020006561) ##20	RWDD1 (ENSACCG00020006571)	ENSACCG00020006579	ZUP1 (ENSACCG00020006610)	KPNA5 (ENSACCG00020006648)	FAM162B (ENSACCG00020006669)	GPRC6A (ENSACCG00020006680)	RFX6 (ENSACCG00020006700)	VGLL2 (ENSACCG00020006724)	ENSACCG00020006739	CEP57L1 (ENSACCG00020006757)	SESN1 (ENSACCG00020006789)	ARMC2 (ENSACCG00020006846)	ENSACCG00020006878	AFG1L (ENSACCG00020006893)
Galloanserae	ANCESTRAL SPECIES	2	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Anatidae	ANCESTRAL SPECIES		ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00960000189563	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Pink-footed goose	MODERN SPECIES	43	MFSD4B (ENSABRG00000000920)	REV3L (ENSABRG00000000848)	ENSABRG00000000776	FYN (ENSABRG00000000747)	CCN6 (ENSABRG00000000698)	TUBE1 (ENSABRG00000000661)	LAMA4 (ENSABRG00000000629)	MARCKS (ENSABRG00000000577)	HDAC2 (ENSABRG00000000551)	HS3ST5 (ENSABRG00000000532)	FRK (ENSABRG00000000463)	ENSABRG00000000444	NT5DC1 (ENSABRG00000000333)	DSE (ENSABRG00000000313)	CALHM6 (ENSABRG00000000306) ##20	CALHM5 (ENSABRG00000000291) ##20	TRAPPC3L (ENSABRG00000000277)	CALHM4 (ENSABRG00000000249) ##20	RWDD1 (ENSABRG00000000238)
Duck	MODERN SPECIES	2999																CALHM5 (ENSAPLG00000010401) ##20
Phasianidae	ANCESTRAL SPECIES	3	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723.g	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Japanese quail	MODERN SPECIES	21	REV3L (ENSCJPG00005009239)	ENSCJPG00005009238	FYN (ENSCJPG00005009237)	CCN6 (ENSCJPG00005009235)	TUBE1 (ENSCJPG00005009234)	LAMA4 (ENSCJPG00005009233)	MARCKS (ENSCJPG00005009226)	ENSCJPG00005009224	HDAC2 (ENSCJPG00005009223)	HS3ST5 (ENSCJPG00005009222)	FRK (ENSCJPG00005009218)	ENSCJPG00005009217	NT5DC1 (ENSCJPG00005009216)	DSE (ENSCJPG00005009215)	CALHM6 (ENSCJPG00005009214) ##20	CALHM5 (ENSCJPG00005009213) ##20	TRAPPC3L (ENSCJPG00005009212)	CALHM4 (ENSCJPG00005009211) ##20	RWDD1 (ENSCJPG00005009210)	ENSCJPG00005009209	ENSCJPG00005009208	ZUP1 (ENSCJPG00005009207)	FAM162B (ENSCJPG00005009206)	KPNA5 (ENSCJPG00005009205)	GPRC6A (ENSCJPG00005009204)	RFX6 (ENSCJPG00005009203)	VGLL2 (ENSCJPG00005009201)	ENSCJPG00005009200	ROS1 (ENSCJPG00005009199)	DCBLD1 (ENSCJPG00005009197)	GOPC (ENSCJPG00005009195)
Phasianidae_b	ANCESTRAL SPECIES	2	ENSGT00940000156226	ENSGT00940000164855	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723.g	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Chicken	MODERN SPECIES	22	FYN (ENSGALG00010013604)	CCN6 (ENSGALG00010013521)	ENSGALG00010015164	TUBE1 (ENSGALG00010013508)	LAMA4 (ENSGALG00010013458)	ENSGALG00010013411	MARCKS (ENSGALG00010013402)	HDAC2 (ENSGALG00010013392)	HS3ST5 (ENSGALG00010013363)	ENSGALG00010013350	FRK (ENSGALG00010014602)	COL10A1 (ENSGALG00010012719)	NT5DC1 (ENSGALG00010012690)	DSE (ENSGALG00010012650)	FAM26F (ENSGALG00010014873) ##20	FAM26E (ENSGALG00010014866) ##20	FAM26D (ENSGALG00010014851) ##20	TRAPPC3L (ENSGALG00010014830)	RWDD1 (ENSGALG00010014812)	ENSGALG00010014764	ZUP1 (ENSGALG00010014734)	KPNA5 (ENSGALG00010014707)	FAM162B (ENSGALG00010014653)	GPRC6A (ENSGALG00010014624)	RFX6 (ENSGALG00010012330)	VGLL2 (ENSGALG00010012376)	ROS1 (ENSGALG00010012360)	DCBLD1 (ENSGALG00010012354)	GOPC (ENSGALG00010012341)	ENSGALG00010014560	NUS1 (ENSGALG00010012629)
Turkey	MODERN SPECIES	11	ENSMGAG00000013515	QRSL1 (ENSMGAG00000013518)	ENSMGAG00000022679	ENSMGAG00000018204	ENSMGAG00000013519	ENSMGAG00000013520	ENSMGAG00000013523	ENSMGAG00000013524	OSTM1 (ENSMGAG00000013498)	NR2E1 (ENSMGAG00000013495)	SNX3 (ENSMGAG00000013494)	AFG1L (ENSMGAG00000013490)	ENSMGAG00000013379	ENSMGAG00000018692	ENSMGAG00000013384 ##20	CALHM5 (ENSMGAG00000019395) ##20	ENSMGAG00000013381	ENSMGAG00000013380 ##20	ENSMGAG00000013385	ENSMGAG00000013382	ENSMGAG00000013387	ENSMGAG00000022386	ENSMGAG00000013388	ENSMGAG00000021850	ENSMGAG00000013395	ENSMGAG00000013396	ENSMGAG00000021302	ENSMGAG00000022379	LAMA4 (ENSMGAG00000013404)	ENSMGAG00000017970	ENSMGAG00000013411
African ostrich	MODERN SPECIES	837									HDAC2 (ENSSCUG00000017413)	HS3ST5 (ENSSCUG00000017412)	FRK (ENSSCUG00000017408)	ENSSCUG00000017407	NT5DC1 (ENSSCUG00000017405)	DSE (ENSSCUG00000017404)	CALHM6 (ENSSCUG00000017403) ##20	CALHM5 (ENSSCUG00000017402) ##20	TRAPPC3L (ENSSCUG00000017401)	CALHM4 (ENSSCUG00000017400) ##20	RWDD1 (ENSSCUG00000017398)	ENSSCUG00000017396	ZUP1 (ENSSCUG00000017391)	KPNA5 (ENSSCUG00000017388)	ENSSCUG00000017386	GPRC6A (ENSSCUG00000017385)	RFX6 (ENSSCUG00000017383)	ROS1 (ENSSCUG00000017377)	DCBLD1 (ENSSCUG00000017375)	GOPC (ENSSCUG00000017372)	ENSSCUG00000017369	NUS1 (ENSSCUG00000017368)	SLC35F1 (ENSSCUG00000017363)
Australian saltwater crocodile	MODERN SPECIES	38	REV3L (ENSCPRG00005001980)	ENSCPRG00005001997	FYN (ENSCPRG00005002011)	CCN6 (ENSCPRG00005002029)	ENSCPRG00005002036	TUBE1 (ENSCPRG00005002040)	LAMA4 (ENSCPRG00005002233)	HDAC2 (ENSCPRG00005003350)	HS3ST5 (ENSCPRG00005003370)	FRK (ENSCPRG00005003403)	NT5DC1 (ENSCPRG00005003414)	ENSCPRG00005003419	DSE (ENSCPRG00005003429)	CALHM6 (ENSCPRG00005003433) ##20	TRAPPC3L (ENSCPRG00005003437)	CALHM5 (ENSCPRG00005003444) ##20	ENSCPRG00005003445	CALHM4 (ENSCPRG00005003448) ##20	RWDD1 (ENSCPRG00005003459)	ENSCPRG00005003489	DHRS1 (ENSCPRG00005003677)	ZUP1 (ENSCPRG00005003679)	KPNA5 (ENSCPRG00005003739)	FAM162B (ENSCPRG00005004198)	GPRC6A (ENSCPRG00005004201)	RFX6 (ENSCPRG00005004215)	VGLL2 (ENSCPRG00005004268)	ROS1 (ENSCPRG00005004284)	DCBLD1 (ENSCPRG00005004302)	GOPC (ENSCPRG00005004309)	ENSCPRG00005004319
Cryptodira	DUPLICATION
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT01030000234610.a.b.m ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Testudinoidea	ANCESTRAL SPECIES	32		ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Emydidae	ANCESTRAL SPECIES	46			ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.b.a	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
painted turtle	MODERN SPECIES	1518														ENSCPBG00000002475 ##20	TRAPPC3L (ENSCPBG00000002488)	ENSCPBG00000002511 ##20
Three-toed box turtle	MODERN SPECIES	15	ENSTMTG00000022304	FYN (ENSTMTG00000022299)	CCN6 (ENSTMTG00000022295)	ENSTMTG00000022292	TUBE1 (ENSTMTG00000022289)	LAMA4 (ENSTMTG00000022279)	MARCKS (ENSTMTG00000022273)	HDAC2 (ENSTMTG00000022269)	HS3ST5 (ENSTMTG00000022267)	FRK (ENSTMTG00000022263)	ENSTMTG00000022259	NT5DC1 (ENSTMTG00000022236)	DSE (ENSTMTG00000022224)	ENSTMTG00000022220 ##20	TRAPPC3L (ENSTMTG00000022216)	ENSTMTG00000022211 ##20	ENSTMTG00000022205	RWDD1 (ENSTMTG00000022203)	ENSTMTG00000022196	ENSTMTG00000022191
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Abingdon island giant tortoise	MODERN SPECIES	54														ENSCABG00000007244 ##20	TRAPPC3L (ENSCABG00000007246)	ENSCABG00000007249 ##20	RWDD1 (ENSCABG00000007250)	ENSCABG00000007289	ENSCABG00000007321	ENSCABG00000007364	ENSCABG00000007365	ZUP1 (ENSCABG00000007367)	KPNA5 (ENSCABG00000007398)	FAM162B (ENSCABG00000008372)	GPRC6A (ENSCABG00000008377)	RFX6 (ENSCABG00000008382)
Goode s thornscrub tortoise	MODERN SPECIES	17	CCN6 (ENSGEVG00005012988)	ENSGEVG00005013062	TUBE1 (ENSGEVG00005013110)	LAMA4 (ENSGEVG00005013254)	MARCKS (ENSGEVG00005014084)	HDAC2 (ENSGEVG00005014147)	HS3ST5 (ENSGEVG00005014212)	FRK (ENSGEVG00005014318)	NT5DC1 (ENSGEVG00005014775)	ENSGEVG00005015741	DSE (ENSGEVG00005015769)	ENSGEVG00005015788 ##20	ENSGEVG00005015807 ##20	ENSGEVG00005015824 ##20	TRAPPC3L (ENSGEVG00005015848)	ENSGEVG00005015884 ##20	ENSGEVG00005015917	RWDD1 (ENSGEVG00005015958)	ENSGEVG00005015987	ENSGEVG00005016048	DHRS1 (ENSGEVG00005016217)	ZUP1 (ENSGEVG00005016262)	KPNA5 (ENSGEVG00005016291)	FAM162B (ENSGEVG00005016336)	GPRC6A (ENSGEVG00005016365)	RFX6 (ENSGEVG00005016425)	VGLL2 (ENSGEVG00005016536)	ROS1 (ENSGEVG00005016750)	DCBLD1 (ENSGEVG00005017616)	GOPC (ENSGEVG00005017652)	ENSGEVG00005017671
Chinese turtle	MODERN SPECIES	1101	FYN (ENSPSIG00000003826)	CCN6 (ENSPSIG00000004042)	TUBE1 (ENSPSIG00000004054)	LAMA4 (ENSPSIG00000004066)	ENSPSIG00000001214	MARCKS (ENSPSIG00000004404)	HDAC2 (ENSPSIG00000004413)	HS3ST5 (ENSPSIG00000004541)	FRK (ENSPSIG00000004668)	NT5DC1 (ENSPSIG00000004784)	ENSPSIG00000004859	DSE (ENSPSIG00000004879)	ENSPSIG00000004992 ##20	ENSPSIG00000005155 ##20	TRAPPC3L (ENSPSIG00000005260)	CALHM5 (ENSPSIG00000005270) ##20	RWDD1 (ENSPSIG00000005283)	ENSPSIG00000005405	ENSPSIG00000005520	ENSPSIG00000005761
Cryptodira	ANCESTRAL SPECIES	1	ENSGT00940000160119.a	ENSGT00940000163923.f	ENSGT00940000163923.e	ENSGT00940000163282.j	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT01030000234610.a.b.m ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Testudinoidea	ANCESTRAL SPECIES	32				ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Emydidae	ANCESTRAL SPECIES	46					ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00390000006522.b	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.b.a	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334
Three-toed box turtle	MODERN SPECIES	15	MFSD4B (ENSTMTG00000022442)	REV3L (ENSTMTG00000022346)	ENSTMTG00000022304	FYN (ENSTMTG00000022299)	CCN6 (ENSTMTG00000022295)	ENSTMTG00000022292	TUBE1 (ENSTMTG00000022289)	LAMA4 (ENSTMTG00000022279)	MARCKS (ENSTMTG00000022273)	HDAC2 (ENSTMTG00000022269)	HS3ST5 (ENSTMTG00000022267)	FRK (ENSTMTG00000022263)	ENSTMTG00000022259	NT5DC1 (ENSTMTG00000022236)	DSE (ENSTMTG00000022224)	ENSTMTG00000022220 ##20	TRAPPC3L (ENSTMTG00000022216)	ENSTMTG00000022211 ##20	ENSTMTG00000022205	RWDD1 (ENSTMTG00000022203)	ENSTMTG00000022196	ENSTMTG00000022191
painted turtle	MODERN SPECIES	1518																ENSCPBG00000002475 ##20	TRAPPC3L (ENSCPBG00000002488)	ENSCPBG00000002511 ##20
Testudinidae	ANCESTRAL SPECIES	10	ENSGT00940000164855	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119.a	ENSGT00940000160119.b	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b.m ##20	ENSGT00390000009168	ENSGT00940000156772.gb	ENSGT00940000156772.fb.a	ENSGT00940000157797	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Abingdon island giant tortoise	MODERN SPECIES	54																ENSCABG00000007244 ##20	TRAPPC3L (ENSCABG00000007246)	ENSCABG00000007249 ##20	RWDD1 (ENSCABG00000007250)	ENSCABG00000007289	ENSCABG00000007321	ENSCABG00000007364	ENSCABG00000007365	ZUP1 (ENSCABG00000007367)	KPNA5 (ENSCABG00000007398)	FAM162B (ENSCABG00000008372)	GPRC6A (ENSCABG00000008377)	RFX6 (ENSCABG00000008382)
Goode s thornscrub tortoise	MODERN SPECIES	17	ENSGEVG00005012800	FYN (ENSGEVG00005012917)	CCN6 (ENSGEVG00005012988)	ENSGEVG00005013062	TUBE1 (ENSGEVG00005013110)	LAMA4 (ENSGEVG00005013254)	MARCKS (ENSGEVG00005014084)	HDAC2 (ENSGEVG00005014147)	HS3ST5 (ENSGEVG00005014212)	FRK (ENSGEVG00005014318)	NT5DC1 (ENSGEVG00005014775)	ENSGEVG00005015741	DSE (ENSGEVG00005015769)	ENSGEVG00005015788 ##20	ENSGEVG00005015807 ##20	ENSGEVG00005015824 ##20	TRAPPC3L (ENSGEVG00005015848)	ENSGEVG00005015884 ##20	ENSGEVG00005015917	RWDD1 (ENSGEVG00005015958)	ENSGEVG00005015987	ENSGEVG00005016048	DHRS1 (ENSGEVG00005016217)	ZUP1 (ENSGEVG00005016262)	KPNA5 (ENSGEVG00005016291)	FAM162B (ENSGEVG00005016336)	GPRC6A (ENSGEVG00005016365)	RFX6 (ENSGEVG00005016425)	VGLL2 (ENSGEVG00005016536)	ROS1 (ENSGEVG00005016750)	DCBLD1 (ENSGEVG00005017616)
Mammalia	ANCESTRAL SPECIES	2	ENSGT00940000164609	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00390000003880.b.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Theria	ANCESTRAL SPECIES	4	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Marsupialia	ANCESTRAL SPECIES	2	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Marsupialia_b	ANCESTRAL SPECIES	1	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Diprotodontia	ANCESTRAL SPECIES	15	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Diprotodontia_a	ANCESTRAL SPECIES	23	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00390000006522.b	ENSGT01030000234610.a.a.m ##20	ENSGT01030000234610.a.a.n ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00940000160861.a	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Common wonbat	MODERN SPECIES	426	FYN (ENSVURG00010022801)	ENSVURG00010022817	CCN6 (ENSVURG00010022820)	TUBE1 (ENSVURG00010022830)	FAM229B (ENSVURG00010022837)	LAMA4 (ENSVURG00010022847)	ENSVURG00010022899	MARCKS (ENSVURG00010022906)	HDAC2 (ENSVURG00010022910)	HS3ST5 (ENSVURG00010022928)	FRK (ENSVURG00010022934)	NT5DC1 (ENSVURG00010022944)	ENSVURG00010022951	DSE (ENSVURG00010022960)	ENSVURG00010022974	CALHM5 (ENSVURG00010022978) ##20	CALHM4 (ENSVURG00010022981) ##20	ENSVURG00010022985	RWDD1 (ENSVURG00010022993)	RSPH4A (ENSVURG00010023005)	ENSVURG00010023011	ENSVURG00010023013	KPNA5 (ENSVURG00010023019)	GPRC6A (ENSVURG00010023032)	RFX6 (ENSVURG00010023038)	ENSVURG00010023044	ENSVURG00010023048	ENSVURG00010023052	DCBLD1 (ENSVURG00010023057)	GOPC (ENSVURG00010023061)	ENSVURG00010023067
koala	MODERN SPECIES	216								FRK (ENSPCIG00000008683)	NT5DC1 (ENSPCIG00000008684)	ENSPCIG00000034146	DSE (ENSPCIG00000008687)	ENSPCIG00000008688	ENSPCIG00000008689 ##20	ENSPCIG00000008693 ##20	TRAPPC3L (ENSPCIG00000008694)	CALHM5 (ENSPCIG00000031293) ##20	CALHM4 (ENSPCIG00000008698) ##20	ENSPCIG00000023060	ENSPCIG00000023063	RSPH4A (ENSPCIG00000023064)	ZUP1 (ENSPCIG00000023066)	KPNA5 (ENSPCIG00000023067)	ENSPCIG00000009100	RFX6 (ENSPCIG00000023071)	ENSPCIG00000031623	DCBLD1 (ENSPCIG00000023078)	GOPC (ENSPCIG00000023081)	ENSPCIG00000023085	NUS1 (ENSPCIG00000022299)	SLC35F1 (ENSPCIG00000033480)	CEP85L (ENSPCIG00000021049)
Tasmanian devil	MODERN SPECIES	3	CCN6 (ENSSHAG00000013692)	TUBE1 (ENSSHAG00000013871)	FAM229B (ENSSHAG00000014011)	LAMA4 (ENSSHAG00000014100)	ENSSHAG00000030163	MARCKS (ENSSHAG00000032396)	HDAC2 (ENSSHAG00000029979)	HS3ST5 (ENSSHAG00000026218)	ENSSHAG00000021743	FRK (ENSSHAG00000018366)	ENSSHAG00000018580	NT5DC1 (ENSSHAG00000018559)	DSE (ENSSHAG00000000534)	ENSSHAG00000025331 ##20	ENSSHAG00000004138 ##20	CALHM5 (ENSSHAG00000023597) ##20	TRAPPC3L (ENSSHAG00000005649)	CALHM4 (ENSSHAG00000006568) ##20	ENSSHAG00000025679	RWDD1 (ENSSHAG00000030217)	RSPH4A (ENSSHAG00000007508)	ZUP1 (ENSSHAG00000017118)	KPNA5 (ENSSHAG00000008042)	GPRC6A (ENSSHAG00000008754)	RFX6 (ENSSHAG00000009393)	ENSSHAG00000011540	DCBLD1 (ENSSHAG00000023740)	GOPC (ENSSHAG00000013357)	ENSSHAG00000013766	NUS1 (ENSSHAG00000031483)	SLC35F1 (ENSSHAG00000022683)
Opossum	MODERN SPECIES	1	HDAC2 (ENSMODG00000017860)	ENSMODG00000037190	HS3ST5 (ENSMODG00000036869)	ENSMODG00000016446	ENSMODG00000042919	ENSMODG00000028476	ENSMODG00000038439	FRK (ENSMODG00000017852)	NT5DC1 (ENSMODG00000017849)	ENSMODG00000050348	ENSMODG00000017850	DSE (ENSMODG00000017846)	ENSMODG00000017842 ##20	ENSMODG00000017841 ##20	TRAPPC3L (ENSMODG00000023338)	CALHM5 (ENSMODG00000017840) ##20	CALHM4 (ENSMODG00000017838) ##20	ENSMODG00000005764	RWDD1 (ENSMODG00000036601)	RSPH4A (ENSMODG00000017836)	ZUP1 (ENSMODG00000017831)	KPNA5 (ENSMODG00000017826)	ENSMODG00000036617	GPRC6A (ENSMODG00000017819)	RFX6 (ENSMODG00000017815)	VGLL2 (ENSMODG00000017809)	DCBLD1 (ENSMODG00000017807)	GOPC (ENSMODG00000017803)	ENSMODG00000017800	NUS1 (ENSMODG00000017799)	SLC35F1 (ENSMODG00000046831)
Eutheria	ANCESTRAL SPECIES	9	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Boreoeutheria	ANCESTRAL SPECIES	7	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Laurasiatheria	ANCESTRAL SPECIES	7	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00990000213455	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Laurasiatheria_a	ANCESTRAL SPECIES	7	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Laurasiatheria_b	ANCESTRAL SPECIES	7	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Carnivora	ANCESTRAL SPECIES	4	ENSGT00940000163194	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Felidae	ANCESTRAL SPECIES	5	ENSGT00940000163194	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Panthera	ANCESTRAL SPECIES	7	ENSGT00940000163194	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Panthera_a	ANCESTRAL SPECIES	4	ENSGT00940000159970	ENSGT01050000247848	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i.a.a	ENSGT00940000156772.i.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
lion	MODERN SPECIES	5	LAMA4 (ENSPLOG00000003185)	ENSPLOG00000003271	MARCKS (ENSPLOG00000003280)	ENSPLOG00000003352	HDAC2 (ENSPLOG00000003360)	HS3ST5 (ENSPLOG00000003442)	FRK (ENSPLOG00000003455)	NT5DC1 (ENSPLOG00000003475)	ENSPLOG00000003489	COL10A1 (ENSPLOG00000003502)	TSPYL4 (ENSPLOG00000003518)	ENSPLOG00000003526	DSE (ENSPLOG00000003558)	CALHM6 (ENSPLOG00000003580) ##20	TRAPPC3L (ENSPLOG00000003593)	CALHM5 (ENSPLOG00000003609) ##20	CALHM4 (ENSPLOG00000003619) ##20	RWDD1 (ENSPLOG00000003637)	ENSPLOG00000003653	RSPH4A (ENSPLOG00000003687)	ZUP1 (ENSPLOG00000003730)	KPNA5 (ENSPLOG00000003759)	FAM162B (ENSPLOG00000003773)	GPRC6A (ENSPLOG00000003804)	RFX6 (ENSPLOG00000003852)	VGLL2 (ENSPLOG00000010770)	ROS1 (ENSPLOG00000011040)	DCBLD1 (ENSPLOG00000011135)	GOPC (ENSPLOG00000011210)	ENSPLOG00000011382	NUS1 (ENSPLOG00000011433)
leopard	MODERN SPECIES	246										NT5DC1 (ENSPPRG00000022632)	COL10A1 (ENSPPRG00000022643)	TSPYL4 (ENSPPRG00000011586)	DSE (ENSPPRG00000022657)	ENSPPRG00000022667 ##20	TRAPPC3L (ENSPPRG00000022673)	CALHM5 (ENSPPRG00000022680) ##20	CALHM4 (ENSPPRG00000022718) ##20	RWDD1 (ENSPPRG00000022725)	ENSPPRG00000022751
Tiger	MODERN SPECIES	120	ENSPTIG00000006415	CCN6 (ENSPTIG00000019399)	TUBE1 (ENSPTIG00000019262)	FAM229B (ENSPTIG00000019248)	LAMA4 (ENSPTIG00000017802)	RFPL4B (ENSPTIG00000006386)	ENSPTIG00000006376	HDAC2 (ENSPTIG00000017437)	HS3ST5 (ENSPTIG00000017379)	FRK (ENSPTIG00000017241)	COL10A1 (ENSPTIG00000016999)	NT5DC1 (ENSPTIG00000016386)	TSPYL4 (ENSPTIG00000006365)	DSE (ENSPTIG00000015410)	ENSPTIG00000015377 ##20	CALHM5 (ENSPTIG00000015346) ##20	TRAPPC3L (ENSPTIG00000015246)	CALHM4 (ENSPTIG00000015112) ##20	RWDD1 (ENSPTIG00000014973)	ENSPTIG00000014688	ENSPTIG00000014529	RSPH4A (ENSPTIG00000014297)	ZUP1 (ENSPTIG00000013533)	KPNA5 (ENSPTIG00000013503)	FAM162B (ENSPTIG00000013420)	GPRC6A (ENSPTIG00000013115)	RFX6 (ENSPTIG00000012468)	ENSPTIG00000012308	ROS1 (ENSPTIG00000011449)	DCBLD1 (ENSPTIG00000011183)	GOPC (ENSPTIG00000010692)
Cat	MODERN SPECIES	236	CCN6 (ENSFCAG00000006305)	TUBE1 (ENSFCAG00000026151)	FAM229B (ENSFCAG00000030116)	LAMA4 (ENSFCAG00000006308)	MARCKS (ENSFCAG00000042952)	ENSFCAG00000051478	HDAC2 (ENSFCAG00000018836)	HS3ST5 (ENSFCAG00000000523)	FRK (ENSFCAG00000004043)	NT5DC1 (ENSFCAG00000013415)	COL10A1 (ENSFCAG00000040804)	TSPYL4 (ENSFCAG00000013418)	DSE (ENSFCAG00000023622)	ENSFCAG00000029592 ##20	TRAPPC3L (ENSFCAG00000021987)	CALHM5 (ENSFCAG00000033745) ##20	CALHM4 (ENSFCAG00000040211) ##20	RWDD1 (ENSFCAG00000025905)	ENSFCAG00000034736	ENSFCAG00000047240	ENSFCAG00000052457	RSPH4A (ENSFCAG00000027641)	ZUP1 (ENSFCAG00000031494)	KPNA5 (ENSFCAG00000023588)	FAM162B (ENSFCAG00000037427)	GPRC6A (ENSFCAG00000044183)	RFX6 (ENSFCAG00000018903)	VGLL2 (ENSFCAG00000043286)	ROS1 (ENSFCAG00000006448)	DCBLD1 (ENSFCAG00000013925)	GOPC (ENSFCAG00000025564)
Caniformia	ANCESTRAL SPECIES	3	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Canidae	ANCESTRAL SPECIES	34	ENSGT00990000203619.A.b.b.a	ENSGT00530000063927.a.a	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00940000162787	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017.ib	ENSGT00390000012017.hb	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Canis_lupus	ANCESTRAL SPECIES		ENSGT00530000063927.a.a	ENSGT00950000185354	ENSGT00940000162752	ENSGT00530000063359.A	ENSGT00940000155237	ENSGT00940000162166	ENSGT00940000162787	ENSGT00950000183181.A.a	ENSGT00390000018436.a.b	ENSGT00940000157846	ENSGT00390000012017.ib	ENSGT00390000012017.hb	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Dingo	MODERN SPECIES	125	ENSCAFG00020019351	CCR6 (ENSCAFG00020019355)	GPR31 (ENSCAFG00020019357)	ENSCAFG00020019364	TTLL2 (ENSCAFG00020019369)	UNC93A (ENSCAFG00020019373)	AFDN (ENSCAFG00020019469)	KIF25 (ENSCAFG00020021134)	DACT2 (ENSCAFG00020021138)	SMOC2 (ENSCAFG00020021152)	THBS2 (ENSCAFG00020021212)	WDR27 (ENSCAFG00020021252)	DSE (ENSCAFG00020021286)	CALHM6 (ENSCAFG00020021288) ##20	TRAPPC3L (ENSCAFG00020021289)	CALHM5 (ENSCAFG00020021296) ##20	ENSCAFG00020021302	RWDD1 (ENSCAFG00020021303)	ENSCAFG00020021310	ENSCAFG00020021315	RSPH4A (ENSCAFG00020021320)	ZUP1 (ENSCAFG00020021322)	KPNA5 (ENSCAFG00020021324)	FAM162B (ENSCAFG00020021355)	GPRC6A (ENSCAFG00020021358)	RFX6 (ENSCAFG00020021362)	VGLL2 (ENSCAFG00020021376)	ROS1 (ENSCAFG00020021389)	DCBLD1 (ENSCAFG00020021412)	GOPC (ENSCAFG00020021415)	ENSCAFG00020021416
Dog	MODERN SPECIES		ENSCAFG00845004856	ENSCAFG00845004865	ENSCAFG00845004871	UNC93A (ENSCAFG00845004882)	ENSCAFG00845004891	ENSCAFG00845004971	ENSCAFG00845005088	FRMD1 (ENSCAFG00845005116)	DACT2 (ENSCAFG00845005143)	SMOC2 (ENSCAFG00845005168)	THBS2 (ENSCAFG00845005227)	ENSCAFG00845005366	DSE (ENSCAFG00845005500)	CALHM6 (ENSCAFG00845005516) ##20	TRAPPC3L (ENSCAFG00845005532)	CALHM5 (ENSCAFG00845005557) ##20	CALHM4 (ENSCAFG00845005573) ##20	RWDD1 (ENSCAFG00845005610)	ENSCAFG00845005641	RSPH4A (ENSCAFG00845005676)	ZUP1 (ENSCAFG00845005699)	KPNA5 (ENSCAFG00845005742)	FAM162B (ENSCAFG00845005779)	GPRC6A (ENSCAFG00845005820)	RFX6 (ENSCAFG00845005871)	VGLL2 (ENSCAFG00845005929)	ROS1 (ENSCAFG00845006019)	DCBLD1 (ENSCAFG00845006335)	GOPC (ENSCAFG00845006479)	NEPN (ENSCAFG00845006606)	NUS1 (ENSCAFG00845006635)
Red fox	MODERN SPECIES	40										ENSVVUG00000016767	ENSVVUG00000016751	ENSVVUG00000016732	DSE (ENSVVUG00000016723)	CALHM6 (ENSVVUG00000016722) ##20	ENSVVUG00000016721	CALHM5 (ENSVVUG00000016720) ##20	CALHM4 (ENSVVUG00000016718) ##20	TRAPPC3L (ENSVVUG00000016711)	ENSVVUG00000016707	ENSVVUG00000016705	RSPH4A (ENSVVUG00000016700)	ZUP1 (ENSVVUG00000016696)	KPNA5 (ENSVVUG00000016678)	FAM162B (ENSVVUG00000016671)	GPRC6A (ENSVVUG00000016663)	RFX6 (ENSVVUG00000016613)	ENSVVUG00000016599	VGLL2 (ENSVVUG00000016593)	ROS1 (ENSVVUG00000015982)	DCBLD1 (ENSVVUG00000015933)	GOPC (ENSVVUG00000015918)
Caniformia_b	ANCESTRAL SPECIES	6	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Mustelinae	ANCESTRAL SPECIES	26	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.a.b	ENSGT01100000263517.b.d.m.a.a.a.a.c.k	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.a.a.a	ENSGT01030000235909	ENSGT01100000263517.b.d.m.a.a.a.a.d.b.u.b	ENSGT00950000182985.b.a	ENSGT00390000004348	ENSGT00940000157723	ENSGT00940000157477	ENSGT00730000111244	ENSGT00940000158401	ENSGT00390000013337	ENSGT00530000064023.b	ENSGT00390000012924.a	ENSGT00940000158133
American mink	MODERN SPECIES	4	ENSNVIG00000006071	CCN6 (ENSNVIG00000006099)	TUBE1 (ENSNVIG00000006184)	CF225 (ENSNVIG00000006208)	LAMA4 (ENSNVIG00000006222)	RFPL4B (ENSNVIG00000006333)	ENSNVIG00000006342	HDAC2 (ENSNVIG00000006360)	HS3S5 (ENSNVIG00000006412)	FRK (ENSNVIG00000006423)	NT5DC1 (ENSNVIG00000006445)	COL10A1 (ENSNVIG00000006451)	TSPYL4 (ENSNVIG00000006466)	DSE (ENSNVIG00000006494)	ENSNVIG00000006528	CALHM5 (ENSNVIG00000006537) ##20	ENSNVIG00000006541	ENSNVIG00000006546	ENSNVIG00000006567	ENSNVIG00000006590	ENSNVIG00000006632	ENSNVIG00000006638	ENSNVIG00000006654	PPP1R14C (ENSNVIG00000006672)	IYD1 (ENSNVIG00000006683)	ENSNVIG00000006714	PLEKHG1 (ENSNVIG00000006728)	MTHFD1L (ENSNVIG00000006768)	AKAP12 (ENSNVIG00000006843)	ZBTB2 (ENSNVIG00000006849)	RMND1 (ENSNVIG00000006864)
Ferret	MODERN SPECIES	201	FYN (ENSMPUG00000010222)	ENSMPUG00000019124	CCN6 (ENSMPUG00000010231)	TUBE1 (ENSMPUG00000010238)	LAMA4 (ENSMPUG00000010247)	RFPL4B (ENSMPUG00000019127)	HDAC2 (ENSMPUG00000010268)	ENSMPUG00000019130	HS3ST5 (ENSMPUG00000010276)	FRK (ENSMPUG00000010284)	NT5DC1 (ENSMPUG00000010294)	COL10A1 (ENSMPUG00000010327)	TSPYL4 (ENSMPUG00000019131)	TSPYL1 (ENSMPUG00000019136)	DSE (ENSMPUG00000010332)	CALHM5 (ENSMPUG00000010338) ##20	ENSMPUG00000010344	ENSMPUG00000010351	ENSMPUG00000010367	ENSMPUG00000010372	ENSMPUG00000010376	ENSMPUG00000010380	ENSMPUG00000010393	ENSMPUG00000019141	IYD (ENSMPUG00000010397)	PLEKHG1 (ENSMPUG00000010404)	ENSMPUG00000010410	MTHFD1L (ENSMPUG00000010414)	ENSMPUG00000010428	ENSMPUG00000010433	AKAP12 (ENSMPUG00000010439)
Ursidae	ANCESTRAL SPECIES	22	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Ursus	ANCESTRAL SPECIES	45												ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.i	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
American black bear	MODERN SPECIES	6613																CALHM5 (ENSUAMG00000014967) ##20	TRAPPC3L (ENSUAMG00000014966)	CALHM4 (ENSUAMG00000014965) ##20
Polar bear	MODERN SPECIES	172								FRK (ENSUMAG00000004055)	ENSUMAG00000004050	COL10A1 (ENSUMAG00000004046)	NT5DC1 (ENSUMAG00000003847)	TSPYL4 (ENSUMAG00000003828)	TSPYL1 (ENSUMAG00000003820)	DSE (ENSUMAG00000003818)	ENSUMAG00000003807 ##20	CALHM5 (ENSUMAG00000003806) ##20	TRAPPC3L (ENSUMAG00000003801)	CALHM4 (ENSUMAG00000003797) ##20	RWDD1 (ENSUMAG00000003790)	ENSUMAG00000003779	ENSUMAG00000003759	ZUP1 (ENSUMAG00000003755)	KPNA5 (ENSUMAG00000003152)	FAM162B (ENSUMAG00000003081)	GPRC6A (ENSUMAG00000003068)	RFX6 (ENSUMAG00000003019)	ENSUMAG00000003008	ROS1 (ENSUMAG00000002961)	ENSUMAG00000002944	DCBLD1 (ENSUMAG00000002929)	GOPC (ENSUMAG00000002923)
Giant Panda	MODERN SPECIES	1	FAM229B (ENSAMEG00000027978)	LAMA4 (ENSAMEG00000016747)	RFPL4B (ENSAMEG00000019194)	ENSAMEG00000031393	ENSAMEG00000025271	HDAC2 (ENSAMEG00000013147)	HS3ST5 (ENSAMEG00000013224)	FRK (ENSAMEG00000013338)	NT5DC1 (ENSAMEG00000005670)	COL10A1 (ENSAMEG00000013356)	TSPYL4 (ENSAMEG00000019723)	TSPYL1 (ENSAMEG00000005672)	DSE (ENSAMEG00000005674)	CALHM6 (ENSAMEG00000005679) ##20	TRAPPC3L (ENSAMEG00000005682)	CALHM5 (ENSAMEG00000005685) ##20	CALHM4 (ENSAMEG00000005689) ##20	RWDD1 (ENSAMEG00000005692)	ENSAMEG00000005716	ENSAMEG00000005725	ENSAMEG00000023971	RSPH4A (ENSAMEG00000005736)	ZUP1 (ENSAMEG00000005752)	KPNA5 (ENSAMEG00000005775)	FAM162B (ENSAMEG00000005819)	GPRC6A (ENSAMEG00000005823)	RFX6 (ENSAMEG00000005843)	ENSAMEG00000005850	ROS1 (ENSAMEG00000005851)	DCBLD1 (ENSAMEG00000005509)	GOPC (ENSAMEG00000005518)
Laurasiatheria_c	ANCESTRAL SPECIES	6	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Equus	ANCESTRAL SPECIES	29	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.o	ENSGT00940000156772.p.a	ENSGT00940000156772.p.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Horse	MODERN SPECIES	1	RFPL4B (ENSECAG00000041082)	MARCKS (ENSECAG00000003398)	ENSECAG00000055511	HDAC2 (ENSECAG00000013577)	HS3ST5 (ENSECAG00000018033)	FRK (ENSECAG00000018039)	NT5DC1 (ENSECAG00000019833)	COL10A1 (ENSECAG00000020826)	TSPYL1 (ENSECAG00000003736)	TSPYL4 (ENSECAG00000030611)	ENSECAG00000031694	DSE (ENSECAG00000020975)	ENSECAG00000021708 ##20	ENSECAG00000051818	TRAPPC3L (ENSECAG00000021978)	CALHM5 (ENSECAG00000023268) ##20	CALHM4 (ENSECAG00000000714) ##20	RWDD1 (ENSECAG00000006587)	ENSECAG00000051393	ENSECAG00000010770	ENSECAG00000044333	RSPH4A (ENSECAG00000012533)	ZUP1 (ENSECAG00000013523)	KPNA5 (ENSECAG00000014734)	FAM162B (ENSECAG00000019150)	GPRC6A (ENSECAG00000019182)	RFX6 (ENSECAG00000019804)	ROS1 (ENSECAG00000023669)	VGLL2 (ENSECAG00000022074)	DCBLD1 (ENSECAG00000007808)	GOPC (ENSECAG00000009566)
Donkey	MODERN SPECIES	16	FAM229B (ENSEASG00005028359)	LAMA4 (ENSEASG00005008172)	RFPL4B (ENSEASG00005038508)	MARCKS (ENSEASG00005008354)	HDAC2 (ENSEASG00005008358)	ENSEASG00005029672	HS3ST5 (ENSEASG00005033931)	FRK (ENSEASG00005008367)	NT5DC1 (ENSEASG00005008369)	COL10A1 (ENSEASG00005008370)	TSPYL4 (ENSEASG00005008371)	TSPYL1 (ENSEASG00005032253)	DSE (ENSEASG00005008373)	ENSEASG00005008375 ##20	TRAPPC3L (ENSEASG00005029591)	CALHM5 (ENSEASG00005008378) ##20	CALHM4 (ENSEASG00005008379) ##20	RWDD1 (ENSEASG00005008380)	ENSEASG00005008382	ENSEASG00005031003	ENSEASG00005028545	ENSEASG00005009048	RSPH4A (ENSEASG00005009050)	ZUP1 (ENSEASG00005009054)	KPNA5 (ENSEASG00005009059)	FAM162B (ENSEASG00005034252)	GPRC6A (ENSEASG00005009064)	RFX6 (ENSEASG00005009070)	ENSEASG00005037022	VGLL2 (ENSEASG00005009087)	ROS1 (ENSEASG00005009099)
Chiroptera	ANCESTRAL SPECIES	3	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Megabat	MODERN SPECIES	2373															TRAPPC3L (ENSPVAG00000015120)	CALHM5 (ENSPVAG00000015121) ##20	CALHM4 (ENSPVAG00000015122) ##20	RWDD1 (ENSPVAG00000015124)
Microchiroptera	ANCESTRAL SPECIES	4	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Microbat	MODERN SPECIES	994	LATS1 (ENSMLUG00000002070)	KATNA1 (ENSMLUG00000002062)	GINM1 (ENSMLUG00000002059)	PPIL4 (ENSMLUG00000002766)	ZC3H12D (ENSMLUG00000029238)	TAB2 (ENSMLUG00000005344)	ENSMLUG00000023007	UST (ENSMLUG00000005127)	ENSMLUG00000008313	COL10A1 (ENSMLUG00000008338)	TSPYL4 (ENSMLUG00000015727)	TSPYL1 (ENSMLUG00000008370)	DSE (ENSMLUG00000002926)	CALHM6 (ENSMLUG00000002931) ##20	TRAPPC3L (ENSMLUG00000002941)	CALHM5 (ENSMLUG00000029405) ##20	CALHM4 (ENSMLUG00000011357) ##20	RWDD1 (ENSMLUG00000030427)	ENSMLUG00000024652	ENSMLUG00000028869	ENSMLUG00000030160	ENSMLUG00000029713	RSPH4A (ENSMLUG00000015892)	ZUP1 (ENSMLUG00000015906)	KPNA5 (ENSMLUG00000010070)	FAM162B (ENSMLUG00000010100)	GPRC6A (ENSMLUG00000010115)	RFX6 (ENSMLUG00000006665)	VGLL2 (ENSMLUG00000022632)	ROS1 (ENSMLUG00000007568)	DCBLD1 (ENSMLUG00000007533)
Greater horseshoe bat	MODERN SPECIES	21	CCN6 (ENSRFEG00010016469)	TUBE1 (ENSRFEG00010016655)	FAM229B (ENSRFEG00010016724)	LAMA4 (ENSRFEG00010016795)	RFPL4B (ENSRFEG00010016880)	MARCKS (ENSRFEG00010016931)	HDAC2 (ENSRFEG00010016988)	HS3ST5 (ENSRFEG00010017069)	ENSRFEG00010017121	FRK (ENSRFEG00010017139)	NT5DC1 (ENSRFEG00010017166)	COL10A1 (ENSRFEG00010017207)	DSE (ENSRFEG00010017346)	CALHM6 (ENSRFEG00010017443) ##20	TRAPPC3L (ENSRFEG00010017466)	CALHM5 (ENSRFEG00010017554) ##20	CALHM4 (ENSRFEG00010017600) ##20	ENSRFEG00010017650	ENSRFEG00010017720	ENSRFEG00010017788	ENSRFEG00010017801	RSPH4A (ENSRFEG00010017838)	ZUP1 (ENSRFEG00010018008)	KPNA5 (ENSRFEG00010018178)	FAM162B (ENSRFEG00010018217)	RFX6 (ENSRFEG00010018276)	VGLL2 (ENSRFEG00010018446)	ROS1 (ENSRFEG00010018524)	ENSRFEG00010018893	DCBLD1 (ENSRFEG00010018940)	GOPC (ENSRFEG00010019030)
Artiodactyla	ANCESTRAL SPECIES	19	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Suina	ANCESTRAL SPECIES	18	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000013639	ENSGT00940000161538	ENSGT00950000183068.b	ENSGT00390000000155.b	ENSGT00950000183134.c.a.b	ENSGT00390000007224.a	ENSGT00390000000509	ENSGT00390000016421.b.b	ENSGT00390000003986	ENSGT00940000154868.a.a	ENSGT00940000156277	ENSGT00940000157191	ENSGT00940000156533.b	ENSGT00950000182984.a
Pig	MODERN SPECIES		RFPL4B (ENSSSCG00000050324)	ENSSSCG00000043946	ENSSSCG00000047473	MARCKS (ENSSSCG00000037803)	HDAC2 (ENSSSCG00000004432)	HS3ST5 (ENSSSCG00000004433)	ENSSSCG00000042456	FRK (ENSSSCG00000004434)	NT5DC1 (ENSSSCG00000004435)	COL10A1 (ENSSSCG00000004436)	TSPYL4 (ENSSSCG00000047800)	TSPYL1 (ENSSSCG00000004438)	DSE (ENSSSCG00000004441)	CALHM6 (ENSSSCG00000036064) ##20	TRAPPC3L (ENSSSCG00000040660)	CALHM5 (ENSSSCG00000031898) ##20	CALHM4 (ENSSSCG00000004445) ##20	ENSSSCG00000004446	ENSSSCG00000025656	ENSSSCG00000023415	ENSSSCG00000043963	ENSSSCG00000040797	LGSN (ENSSSCG00000004450)	RIPPLY2 (ENSSSCG00000062898)	SNAP91 (ENSSSCG00000004453)	PRSS35 (ENSSSCG00000004452)	ME1 (ENSSSCG00000004454)	RWDD2A (ENSSSCG00000029129)	PGM3 (ENSSSCG00000004456)	DOP1A (ENSSSCG00000004457)	UBE3D (ENSSSCG00000026346)
Chacoan peccary	MODERN SPECIES	61	LAMA4 (ENSCWAG00000008444)	MARCKS (ENSCWAG00000008550)	ENSCWAG00000008580	HDAC2 (ENSCWAG00000008651)	HS3ST5 (ENSCWAG00000008713)	FRK (ENSCWAG00000008748)	NT5DC1 (ENSCWAG00000008856)	COL10A1 (ENSCWAG00000008896)	ENSCWAG00000008941	ENSCWAG00000008967	TSPYL4 (ENSCWAG00000009011)	TSPYL1 (ENSCWAG00000009025)	DSE (ENSCWAG00000009050)	CALHM6 (ENSCWAG00000009128) ##20	TRAPPC3L (ENSCWAG00000009152)	CALHM5 (ENSCWAG00000009224) ##20	CALHM4 (ENSCWAG00000009259) ##20	RWDD1 (ENSCWAG00000009319)	LGSN (ENSCWAG00000009373)	ENSCWAG00000009512	SNAP91 (ENSCWAG00000009617)	PRSS35 (ENSCWAG00000010881)	ME1 (ENSCWAG00000010897)	RWDD2A (ENSCWAG00000010932)	PGM3 (ENSCWAG00000010966)	DOP1A (ENSCWAG00000011136)	UBE3D (ENSCWAG00000011379)	TPBG (ENSCWAG00000012210)	IBTK (ENSCWAG00000012235)	TENT5A (ENSCWAG00000012430)	BCKDHB (ENSCWAG00000012495)
Artiodactyla_a	ANCESTRAL SPECIES	21	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Camelidae	ANCESTRAL SPECIES	26	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223	ENSGT00940000162914
Arabian camel	MODERN SPECIES	34	FAM229B (ENSCDRG00005003348)	LAMA4 (ENSCDRG00005003254)	ENSCDRG00005003222	MARCKS (ENSCDRG00005003193)	ENSCDRG00005003186	HDAC2 (ENSCDRG00005003171)	HS3ST5 (ENSCDRG00005003162)	FRK (ENSCDRG00005003143)	ENSCDRG00005003130	COL10A1 (ENSCDRG00005003121)	NT5DC1 (ENSCDRG00005003104)	TSPYL4 (ENSCDRG00005003098)	TSPYL1 (ENSCDRG00005003092)	DSE (ENSCDRG00005003068)	CALHM6 (ENSCDRG00005003016) ##20	CALHM5 (ENSCDRG00005003006) ##20	TRAPPC3L (ENSCDRG00005002989)	CALHM4 (ENSCDRG00005002979) ##20	RWDD1 (ENSCDRG00005002965)	ENSCDRG00005002955	RSPH4A (ENSCDRG00005002922)	ZUP1 (ENSCDRG00005002876)	KPNA5 (ENSCDRG00005002825)	FAM162B (ENSCDRG00005002796)	GPRC6A (ENSCDRG00005002744)	RFX6 (ENSCDRG00005002698)	ENSCDRG00005002682	ROS1 (ENSCDRG00005002608)	DCBLD1 (ENSCDRG00005002557)	GOPC (ENSCDRG00005002474)	ENSCDRG00005002449
Alpaca	MODERN SPECIES	2547														ENSVPAG00000002185 ##20	TRAPPC3L (ENSVPAG00000002186)	CALHM5 (ENSVPAG00000002187) ##20	CALHM4 (ENSVPAG00000002188) ##20	RWDD1 (ENSVPAG00000002189)	RSPH4A (ENSVPAG00000002191)	ZUP1 (ENSVPAG00000002192)	KPNA5 (ENSVPAG00000002193)	FAM162B (ENSVPAG00000002195)	GPRC6A (ENSVPAG00000002197)	RFX6 (ENSVPAG00000002198)	DCBLD1 (ENSVPAG00000002199)	GOPC (ENSVPAG00000002203)	NUS1 (ENSVPAG00000002205)
Artiodactyla_b	ANCESTRAL SPECIES	18	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Cetacea	ANCESTRAL SPECIES	18	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Odontoceti	ANCESTRAL SPECIES	18	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.fb.a
Odontoceti_a	ANCESTRAL SPECIES	16	ENSGT00390000010526	ENSGT00940000155725.c.a	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.fb.a	ENSGT00940000155203.c.a.a.b
Odontoceti_b	ANCESTRAL SPECIES	18	ENSGT00730000111419	ENSGT00940000155725.c.a	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00390000010210.g	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.fb.a	ENSGT00940000155203.c.a.a.b
Monodontidae	ANCESTRAL SPECIES	18	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725.c.a	ENSGT00940000154951.j.b	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00960000188119	ENSGT00940000154317.a.b	ENSGT01010000228913	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT00390000009168	ENSGT00940000156772.r	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.fb.a	ENSGT00940000155203.c.a.a.b	ENSGT00390000015655.b
Narwhal	MODERN SPECIES	301	RFPL4B (ENSMMNG00015005237)	MARCKS (ENSMMNG00015005242)	ENSMMNG00015005256	ENSMMNG00015005291	HS3ST5 (ENSMMNG00015005299)	FRK (ENSMMNG00015005316)	NT5DC1 (ENSMMNG00015005330)	ENSMMNG00015005344	COL10A1 (ENSMMNG00015005355)	ENSMMNG00015005366	TSPYL4 (ENSMMNG00015005368)	TSPYL1 (ENSMMNG00015005374)	DSE (ENSMMNG00015005398)	CALHM6 (ENSMMNG00015005416) ##20	ENSMMNG00015005423	CALHM5 (ENSMMNG00015005431) ##20	RWDD1 (ENSMMNG00015005444)	ENSMMNG00015005470	RSPH4A (ENSMMNG00015005528)	ZUP1 (ENSMMNG00015005586)	KPNA5 (ENSMMNG00015005622)	ENSMMNG00015005645	RFX6 (ENSMMNG00015005664)	VGLL2 (ENSMMNG00015005717)	ROS1 (ENSMMNG00015005760)	DCBLD1 (ENSMMNG00015005797)	GOPC (ENSMMNG00015005841)	ENSMMNG00015005868	NUS1 (ENSMMNG00015005877)	ENSMMNG00015005892	SLC35F1 (ENSMMNG00015005905)
Beluga whale	MODERN SPECIES	80	ENSDLEG00000008750	MARCKS (ENSDLEG00000008765)	ENSDLEG00000008805	ENSDLEG00000008835	HS3ST5 (ENSDLEG00000008858)	FRK (ENSDLEG00000008878)	NT5DC1 (ENSDLEG00000008913)	COL10A1 (ENSDLEG00000008950)	ENSDLEG00000008963	ENSDLEG00000008984	TSPYL4 (ENSDLEG00000009007)	TSPYL1 (ENSDLEG00000009017)	DSE (ENSDLEG00000009031)	CALHM6 (ENSDLEG00000009051) ##20	TRAPPC3L (ENSDLEG00000009065)	CALHM5 (ENSDLEG00000009096) ##20	RWDD1 (ENSDLEG00000009107)	ENSDLEG00000009142	RSPH4A (ENSDLEG00000009231)	ZUFSP (ENSDLEG00000009259)	KPNA5 (ENSDLEG00000009304)	ENSDLEG00000009360	RFX6 (ENSDLEG00000009399)	VGLL2 (ENSDLEG00000009573)	ROS1 (ENSDLEG00000009633)	DCBLD1 (ENSDLEG00000010188)	GOPC (ENSDLEG00000010264)	ENSDLEG00000010330	ENSDLEG00000010342	ENSDLEG00000010354	SLC35F1 (ENSDLEG00000010371)
Vaquita	MODERN SPECIES	3	ENSPSNG00000008695	LAMA4 (ENSPSNG00000008592)	RFPL4B (ENSPSNG00000008570)	MARCKS (ENSPSNG00000008534)	ENSPSNG00000008494	HS3ST5 (ENSPSNG00000008454)	ENSPSNG00000008427	FRK (ENSPSNG00000008357)	COL10A1 (ENSPSNG00000008333)	NT5DC1 (ENSPSNG00000008301)	TSPYL4 (ENSPSNG00000008269)	TSPYL1 (ENSPSNG00000008248)	DSE (ENSPSNG00000015522)	CALHM6 (ENSPSNG00000015458) ##20	ENSPSNG00000015417	CALHM5 (ENSPSNG00000015370) ##20	RWDD1 (ENSPSNG00000015291)	ENSPSNG00000015188	ENSPSNG00000015114	RSPH4A (ENSPSNG00000014807)	ZUP1 (ENSPSNG00000014675)	KPNA5 (ENSPSNG00000014587)	ENSPSNG00000014478	RFX6 (ENSPSNG00000014229)	VGLL2 (ENSPSNG00000014117)	ROS1 (ENSPSNG00000012984)	ENSPSNG00000012888	DCBLD1 (ENSPSNG00000012812)	GOPC (ENSPSNG00000012679)	ENSPSNG00000012618	ENSPSNG00000012573
Dolphin	MODERN SPECIES	3432													DSE (ENSTTRG00000016545)	ENSTTRG00000016546 ##20	ENSTTRG00000016547	CALHM5 (ENSTTRG00000016548) ##20	RWDD1 (ENSTTRG00000016549)
Sperm whale	MODERN SPECIES	1	LAMA4 (ENSPCTG00005014812)	RFPL4B (ENSPCTG00005014764)	MARCKS (ENSPCTG00005014735)	HDAC2 (ENSPCTG00005014660)	ENSPCTG00005014592	HS3ST5 (ENSPCTG00005014555)	ENSPCTG00005014516	FRK (ENSPCTG00005014412)	COL10A1 (ENSPCTG00005014373)	NT5DC1 (ENSPCTG00005014318)	TSPYL4 (ENSPCTG00005014296)	TSPYL1 (ENSPCTG00005014244)	DSE (ENSPCTG00005014130)	CALHM6 (ENSPCTG00005014068) ##20	ENSPCTG00005014023	CALHM5 (ENSPCTG00005013991) ##20	CALHM4 (ENSPCTG00005013957) ##20	RWDD1 (ENSPCTG00005013868)	ENSPCTG00005013836	RSPH4A (ENSPCTG00005013636)	ZUP1 (ENSPCTG00005013556)	KPNA5 (ENSPCTG00005013498)	ENSPCTG00005013476	ENSPCTG00005013422	GPRC6A (ENSPCTG00005013287)	RFX6 (ENSPCTG00005013021)	VGLL2 (ENSPCTG00005012958)	ROS1 (ENSPCTG00005012163)	DCBLD1 (ENSPCTG00005011969)	GOPC (ENSPCTG00005011840)	ENSPCTG00005011801
Blue whale	MODERN SPECIES	3	TUBE1 (ENSBMSG00010013084)	ENSBMSG00010013077	LAMA4 (ENSBMSG00010013059)	RFPL4B (ENSBMSG00010013050)	MARCKS (ENSBMSG00010013045)	ENSBMSG00010013029	HS3ST5 (ENSBMSG00010013020)	FRK (ENSBMSG00010013005)	COL10A1 (ENSBMSG00010012998)	NT5DC1 (ENSBMSG00010012985)	TSPYL4 (ENSBMSG00010012977)	TSPYL1 (ENSBMSG00010012974)	DSE (ENSBMSG00010012963)	CALHM6 (ENSBMSG00010012947) ##20	ENSBMSG00010012945	CALHM5 (ENSBMSG00010012937) ##20	RWDD1 (ENSBMSG00010012927)	ENSBMSG00010012918	RSPH4A (ENSBMSG00010012884)	ZUP1 (ENSBMSG00010012859)	KPNA5 (ENSBMSG00010012836)	ENSBMSG00010012825	FAM162B (ENSBMSG00010012817)	RFX6 (ENSBMSG00010012789)	VGLL2 (ENSBMSG00010012771)	ROS1 (ENSBMSG00010012625)	DCBLD1 (ENSBMSG00010012558)	GOPC (ENSBMSG00010012533)	ENSBMSG00010012507	NUS1 (ENSBMSG00010012495)	ENSBMSG00010012487
Pecora	ANCESTRAL SPECIES	19	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Percora_a	ANCESTRAL SPECIES	21	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00390000009168.v.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Bovidae	ANCESTRAL SPECIES	21	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Bovinae	ANCESTRAL SPECIES	31	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Bos	ANCESTRAL SPECIES	19	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Bos_a	ANCESTRAL SPECIES	18	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Wild yak	MODERN SPECIES	855																CALHM5 (ENSBMUG00000021569) ##20	TRAPPC3L (ENSBMUG00000021553)	CALHM4 (ENSBMUG00000021540) ##20	RWDD1 (ENSBMUG00000021530)	ENSBMUG00000021521	ENSBMUG00000021516	RSPH4A (ENSBMUG00000021494)	ZUP1 (ENSBMUG00000021452)	KPNA5 (ENSBMUG00000021424)	FAM162B (ENSBMUG00000021406)	RFX6 (ENSBMUG00000021385)
Domestic yak	MODERN SPECIES	1	LAMA4 (ENSBGRG00000012696)	ENSBGRG00000013479	ENSBGRG00000013503	ENSBGRG00000013525	MARCKS (ENSBGRG00000013546)	HDAC2 (ENSBGRG00000013629)	HS3ST5 (ENSBGRG00000013854)	FRK (ENSBGRG00000005311)	NT5DC1 (ENSBGRG00000005373)	COL10A1 (ENSBGRG00000005476)	TSPYL4 (ENSBGRG00000005502)	ENSBGRG00000005510	DSE (ENSBGRG00000005532)	CALHM6 (ENSBGRG00000005600) ##20	TRAPPC3L (ENSBGRG00000005625)	CALHM5 (ENSBGRG00000005669) ##20	CALHM4 (ENSBGRG00000005714) ##20	RWDD1 (ENSBGRG00000005754)	ENSBGRG00000005844	RSPH4A (ENSBGRG00000005878)	ZUP1 (ENSBGRG00000005961)	KPNA5 (ENSBGRG00000006026)	FAM162B (ENSBGRG00000006132)	RFX6 (ENSBGRG00000006177)	VGLL2 (ENSBGRG00000006319)	ROS1 (ENSBGRG00000006479)	ENSBGRG00000006843	ENSBGRG00000006862	DCBLD1 (ENSBGRG00000006916)	GOPC (ENSBGRG00000007399)	ENSBGRG00000007720
Bos_b	ANCESTRAL SPECIES	24	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723.c	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821.g.a	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.b	ENSGT00940000156772.r	ENSGT00940000156772.q.a	ENSGT00940000156772.q.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Cow	MODERN SPECIES	28	CCN6 (ENSBTAG00000017205)	TUBE1 (ENSBTAG00000013837)	FAM229B (ENSBTAG00000033429)	LAMA4 (ENSBTAG00000008817)	MARCKS (ENSBTAG00000002082)	HDAC2 (ENSBTAG00000011849)	ENSBTAG00000049305	HS3ST5 (ENSBTAG00000000188)	FRK (ENSBTAG00000020018)	COL10A1 (ENSBTAG00000003078)	NT5DC1 (ENSBTAG00000003076)	TSPYL4 (ENSBTAG00000009127)	TSPYL1 (ENSBTAG00000010885)	DSE (ENSBTAG00000005205)	CALHM6 (ENSBTAG00000006549) ##20	CALHM5 (ENSBTAG00000045879) ##20	TRAPPC3L (ENSBTAG00000033554)	CALHM4 (ENSBTAG00000033535) ##20	RWDD1 (ENSBTAG00000009689)	SULT1C4 (ENSBTAG00000026672)	ENSBTAG00000050815	RSPH4A (ENSBTAG00000011890)	ZUP1 (ENSBTAG00000003878)	KPNA5 (ENSBTAG00000026673)	FAM162B (ENSBTAG00000033460)	RFX6 (ENSBTAG00000000264)	VGLL2 (ENSBTAG00000046282)	ROS1 (ENSBTAG00000047600)	DCBLD1 (ENSBTAG00000047338)	GOPC (ENSBTAG00000016046)	NEPN (ENSBTAG00000039574)
Hybrid Bos Indicus	MODERN SPECIES	28	ENSBIXG00005009508	FAM229B (ENSBIXG00005009541)	LAMA4 (ENSBIXG00005009675)	ENSBIXG00005009782	MARCKS (ENSBIXG00005005803)	ENSBIXG00005009805	HDAC2 (ENSBIXG00005005946)	HS3ST5 (ENSBIXG00005000647)	FRK (ENSBIXG00005009902)	COL10A1 (ENSBIXG00005009915)	NT5DC1 (ENSBIXG00005009924)	TSPYL4 (ENSBIXG00005009942)	ENSBIXG00005009950	DSE (ENSBIXG00005009989)	CALHM6 (ENSBIXG00005010017) ##20	CALHM5 (ENSBIXG00005000765) ##20	TRAPPC3L (ENSBIXG00005010050)	CALHM4 (ENSBIXG00005010065) ##20	ENSBIXG00005006416	ENSBIXG00005010118	ENSBIXG00005010142	RSPH4A (ENSBIXG00005010221)	ZUP1 (ENSBIXG00005010258)	KPNA5 (ENSBIXG00005000829)	FAM162B (ENSBIXG00005010298)	RFX6 (ENSBIXG00005010323)	VGLL2 (ENSBIXG00005010356)	ROS1 (ENSBIXG00005010381)	DCBLD1 (ENSBIXG00005000746)	GOPC (ENSBIXG00005010544)	ENSBIXG00005000708
American bison	MODERN SPECIES	3332	CSNK2A2 (ENSBBBG00000009499)	CCDC113 (ENSBBBG00000001521)	ENSBBBG00000009506	GINS3 (ENSBBBG00000009512)	NDRG4 (ENSBBBG00000009621)	SETD6 (ENSBBBG00000009667)	CNOT1 (ENSBBBG00000009711)	SLC38A7 (ENSBBBG00000009730)	GOT2 (ENSBBBG00000009736)	COL10A1 (ENSBBBG00000009745)	NT5DC1 (ENSBBBG00000009754)	TSPYL4 (ENSBBBG00000009756)	ENSBBBG00000009757	DSE (ENSBBBG00000009038)	ENSBBBG00000009766 ##20	CALHM5 (ENSBBBG00000001616) ##20	TRAPPC3L (ENSBBBG00000009772)	CALHM4 (ENSBBBG00000009776) ##20	ENSBBBG00000009781	RSPH4A (ENSBBBG00000009798)	ZUP1 (ENSBBBG00000009809)	KPNA5 (ENSBBBG00000009821)	FAM162B (ENSBBBG00000009824)	RFX6 (ENSBBBG00000009832)	VGLL2 (ENSBBBG00000009836)	ROS1 (ENSBBBG00000009903)	DCBLD1 (ENSBBBG00000001665)	GOPC (ENSBBBG00000009979)	ENSBBBG00000009991	NUS1 (ENSBBBG00000009996)	SLC35F1 (ENSBBBG00000010003)
Caprinae	ANCESTRAL SPECIES	33	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.v.a.b	ENSGT00940000156772.q.a	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Goat	MODERN SPECIES	28	FYN (ENSCHIG00000009044)	CCN6 (ENSCHIG00000025400)	TUBE1 (ENSCHIG00000020635)	FAM229B (ENSCHIG00000018398)	LAMA4 (ENSCHIG00000019560)	MARCKS (ENSCHIG00000009392)	HDAC2 (ENSCHIG00000024213)	HS3ST5 (ENSCHIG00000019513)	FRK (ENSCHIG00000006701)	COL10A1 (ENSCHIG00000008425)	NT5DC1 (ENSCHIG00000025209)	TSPYL1 (ENSCHIG00000013019)	DSE (ENSCHIG00000010064)	ENSCHIG00000025860 ##20	ENSCHIG00000022717 ##20	CALHM5 (ENSCHIG00000018702) ##20	TRAPPC3L (ENSCHIG00000021481)	CALHM4 (ENSCHIG00000006125) ##20	ENSCHIG00000020636	ENSCHIG00000014681	RSPH4A (ENSCHIG00000022737)	ZUP1 (ENSCHIG00000022998)	FAM162B (ENSCHIG00000013451)	KPNA5 (ENSCHIG00000025297)	RFX6 (ENSCHIG00000021570)	VGLL2 (ENSCHIG00000014445)	ROS1 (ENSCHIG00000016323)	ENSCHIG00000010524	GOPC (ENSCHIG00000017940)	ENSCHIG00000018408	ENSCHIG00000025425
Rambouillet Sheep	MODERN SPECIES	24	CCN6 (ENSOARG00020005518)	TUBE1 (ENSOARG00020005476)	FAM229B (ENSOARG00020005460)	LAMA4 (ENSOARG00020005126)	MARCKS (ENSOARG00020005081)	HDAC2 (ENSOARG00020004977)	HS3ST5 (ENSOARG00020004941)	ENSOARG00020004910	FRK (ENSOARG00020004867)	COL10A1 (ENSOARG00020004849)	NT5DC1 (ENSOARG00020004710)	ENSOARG00020004693	ENSOARG00020004681	TSPYL1 (ENSOARG00020004668)	DSE (ENSOARG00020004597)	CALHM5 (ENSOARG00020004537) ##20	TRAPPC3L (ENSOARG00020004501)	CALHM4 (ENSOARG00020004478) ##20	ENSOARG00020004445	ENSOARG00020004418	ZUP1 (ENSOARG00020004156)	KPNA5 (ENSOARG00020004060)	FAM162B (ENSOARG00020004032)	RFX6 (ENSOARG00020003959)	VGLL2 (ENSOARG00020003907)	ROS1 (ENSOARG00020003121)	DCBLD1 (ENSOARG00020023381)	GOPC (ENSOARG00020023190)	ENSOARG00020023154	NUS1 (ENSOARG00020023137)	ENSOARG00020023109
Siberian musk deer	MODERN SPECIES	55		MARCKS (ENSMMSG00000004987)	ENSMMSG00000004892	HS3ST5 (ENSMMSG00000004861)	ENSMMSG00000004852	ENSMMSG00000004842	ENSMMSG00000004817	ENSMMSG00000004714	FRK (ENSMMSG00000004640)	COL10A1 (ENSMMSG00000004611)	NT5DC1 (ENSMMSG00000004536)	TSPYL4 (ENSMMSG00000004521)	TSPYL1 (ENSMMSG00000004513)	DSE (ENSMMSG00000004477)	CALHM6 (ENSMMSG00000004443) ##20	CALHM5 (ENSMMSG00000004430) ##20	TRAPPC3L (ENSMMSG00000004425)	CALHM4 (ENSMMSG00000004408) ##20	ENSMMSG00000004377	ENSMMSG00000004355	ENSMMSG00000004337	RSPH4A (ENSMMSG00000004275)	ZUP1 (ENSMMSG00000004239)	KPNA5 (ENSMMSG00000004217)	FAM162B (ENSMMSG00000004205)	RFX6 (ENSMMSG00000004143)	VGLL2 (ENSMMSG00000004130)	ROS1 (ENSMMSG00000003965)	DCBLD1 (ENSMMSG00000003913)	GOPC (ENSMMSG00000003874)	ENSMMSG00000003850
Yarkand deer	MODERN SPECIES	20	CCN6 (ENSCHYG00000024312)	TUBE1 (ENSCHYG00000024271)	FAM229B (ENSCHYG00000024251)	LAMA4 (ENSCHYG00000023891)	MARCKS (ENSCHYG00000023854)	ENSCHYG00000023836	ENSCHYG00000023650	HS3ST5 (ENSCHYG00000023609)	FRK (ENSCHYG00000023541)	COL10A1 (ENSCHYG00000023514)	NT5DC1 (ENSCHYG00000023450)	TSPYL4 (ENSCHYG00000023428)	ENSCHYG00000023415	ENSCHYG00000023336	CALHM6 (ENSCHYG00000023311) ##20	CALHM5 (ENSCHYG00000023274) ##20	TRAPPC3L (ENSCHYG00000023206)	CALHM4 (ENSCHYG00000023149) ##20	ENSCHYG00000023080	ENSCHYG00000023038	RSPH4A (ENSCHYG00000022831)	ZUP1 (ENSCHYG00000022708)	KPNA5 (ENSCHYG00000022607)	FAM162B (ENSCHYG00000022579)	RFX6 (ENSCHYG00000022453)	ENSCHYG00000022426	ROS1 (ENSCHYG00000021945)	DCBLD1 (ENSCHYG00000021744)	GOPC (ENSCHYG00000021189)	ENSCHYG00000021123	ENSCHYG00000021027
Eulipotyphla	ANCESTRAL SPECIES	774														ENSGT01030000234610.a.a.u ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20
Hedgehog	MODERN SPECIES	7175																CALHM5 (ENSEEUG00000003825) ##20
Common shrew	MODERN SPECIES	6274														ENSSARG00000004410 ##20	TRAPPC3L (ENSSARG00000004434)	CALHM5 (ENSSARG00000004449) ##20
Euarchontoglires	ANCESTRAL SPECIES	7	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Euarchontoglires_A	ANCESTRAL SPECIES	6	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Tree shrew	MODERN SPECIES	4335													DSE (ENSTBEG00000009310)	CALHM6 (ENSTBEG00000009471) ##20	TRAPPC3L (ENSTBEG00000001430)	CALHM5 (ENSTBEG00000001977) ##20	CALHM4 (ENSTBEG00000002287) ##20	RWDD1 (ENSTBEG00000002543)
Glires	ANCESTRAL SPECIES	5	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Lagomorpha	ANCESTRAL SPECIES	108			ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000163953	ENSGT00960000188119	ENSGT00940000162991	ENSGT00940000166162	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT01050000244950.a.a.b	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Rabbit	MODERN SPECIES	3	ENSOCUG00000032491	ENSOCUG00000037887	FRK (ENSOCUG00000001181)	NT5DC1 (ENSOCUG00000001184)	ENSOCUG00000001188	ENSOCUG00000022880	TSPYL4 (ENSOCUG00000016118)	ENSOCUG00000015797	ENSOCUG00000032572	DSE (ENSOCUG00000007344)	CALHM6 (ENSOCUG00000029266) ##20	ENSOCUG00000030465	ENSOCUG00000035395	ENSOCUG00000032983	TRAPPC3L (ENSOCUG00000002656)	CALHM5 (ENSOCUG00000002660) ##20	CALHM4 (ENSOCUG00000025315) ##20	ENSOCUG00000013592	SULT3A1 (ENSOCUG00000021060)	ENSOCUG00000022763	ENSOCUG00000021703	KPNA5 (ENSOCUG00000007812)	RSPH4A (ENSOCUG00000009852)	ZUP1 (ENSOCUG00000007805)	ENSOCUG00000037695	FAM162B (ENSOCUG00000022415)	GPRC6A (ENSOCUG00000010194)	ENSOCUG00000037461	ENSOCUG00000013444	RFX6 (ENSOCUG00000013227)	ENSOCUG00000034186
Pika	MODERN SPECIES	3259													DSE (ENSOPRG00000005682)	CALHM6 (ENSOPRG00000005695) ##20	TRAPPC3L (ENSOPRG00000005702)	CALHM5 (ENSOPRG00000005717) ##20	RWDD1 (ENSOPRG00000005722)
Rodentia	ANCESTRAL SPECIES	6	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Rodentia_A	ANCESTRAL SPECIES	8	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT01050000247848	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Sciuridae	ANCESTRAL SPECIES	1	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT01050000247848	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w	ENSGT00940000156772.x	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Marmotini	ANCESTRAL SPECIES	11	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w	ENSGT00940000156772.x	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT01100000266009
Marmotini_b	ANCESTRAL SPECIES	230							ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772.w
Arctic ground squirrel	MODERN SPECIES	641										FRK (ENSUPAG00010000456)	ENSUPAG00010000440	NT5DC1 (ENSUPAG00010000422)	TSPYL4 (ENSUPAG00010000416)	DSE (ENSUPAG00010000398)	CALHM6 (ENSUPAG00010000391) ##20	CALHM5 (ENSUPAG00010000386) ##20	TRAPPC3L (ENSUPAG00010000373)	CALHM4 (ENSUPAG00010000356) ##20	RWDD1 (ENSUPAG00010000317)	ENSUPAG00010000296
Squirrel	MODERN SPECIES	424								FRK (ENSSTOG00000010404)	NT5DC1 (ENSSTOG00000008916)	COL10A1 (ENSSTOG00000008935)	TSPYL4 (ENSSTOG00000008940)	TSPYL1 (ENSSTOG00000028666)	DSE (ENSSTOG00000013912)	CALHM6 (ENSSTOG00000006731) ##20	TRAPPC3L (ENSSTOG00000032320)	CALHM5 (ENSSTOG00000006744) ##20	CALHM4 (ENSSTOG00000001157) ##20	RWDD1 (ENSSTOG00000020231)
Alpin marmot	MODERN SPECIES	2	TRAF3IP2 (ENSMMMG00000014896)	FYN (ENSMMMG00000014912)	CCN6 (ENSMMMG00000015161)	TUBE1 (ENSMMMG00000015165)	FAM229B (ENSMMMG00000015179)	LAMA4 (ENSMMMG00000015194)	ENSMMMG00000015261	HDAC2 (ENSMMMG00000015264)	HS3ST5 (ENSMMMG00000015290)	FRK (ENSMMMG00000015306)	ENSMMMG00000015316	ENSMMMG00000015321	TSPYL4 (ENSMMMG00000015326)	DSE (ENSMMMG00000015341)	CALHM6 (ENSMMMG00000015349) ##20	CALHM5 (ENSMMMG00000015357) ##20	CALHM4 (ENSMMMG00000015364) ##20	RWDD1 (ENSMMMG00000015368)	ENSMMMG00000015375	ENSMMMG00000015383	ENSMMMG00000015402	RSPH4A (ENSMMMG00000015424)	ZUP1 (ENSMMMG00000015434)	KPNA5 (ENSMMMG00000015469)	FAM162B (ENSMMMG00000015589)	GPRC6A (ENSMMMG00000015597)	RFX6 (ENSMMMG00000015641)	VGLL2 (ENSMMMG00000015787)	ROS1 (ENSMMMG00000015799)	DCBLD1 (ENSMMMG00000015903)	GOPC (ENSMMMG00000015918)
Eurasian red squirrel	MODERN SPECIES	16	ENSSVLG00005010294	MARCKS (ENSSVLG00005010232)	ENSSVLG00005010204	HDAC2 (ENSSVLG00005010140)	ENSSVLG00005010101	HS3ST5 (ENSSVLG00005010072)	ENSSVLG00005010037	ENSSVLG00005010009	FRK (ENSSVLG00005009937)	COL10A1 (ENSSVLG00005009901)	NT5DC1 (ENSSVLG00005009872)	TSPYL4 (ENSSVLG00005009852)	TSPYL1 (ENSSVLG00005009835)	DSE (ENSSVLG00005009768)	CALHM6 (ENSSVLG00005009719) ##20	CALHM5 (ENSSVLG00005009693) ##20	TRAPPC3L (ENSSVLG00005009643)	CALHM4 (ENSSVLG00005009602) ##20	ENSSVLG00005009556	ENSSVLG00005009507	RSPH4A (ENSSVLG00005009389)	ZUP1 (ENSSVLG00005009321)	KPNA5 (ENSSVLG00005009288)	FAM162B (ENSSVLG00005009241)	GPRC6A (ENSSVLG00005009132)	RFX6 (ENSSVLG00005008988)	VGLL2 (ENSSVLG00005008910)	ROS1 (ENSSVLG00005008411)	GOPC (ENSSVLG00005008267)	ENSSVLG00005008200	ENSSVLG00005008163
Hystricomorpha	ANCESTRAL SPECIES	41	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Naked mole-rat female	MODERN SPECIES	30	ATG4B (ENSHGLG00000018630)	DTYMK (ENSHGLG00000018717)	ING5 (ENSHGLG00000037490)	D2HGDH (ENSHGLG00000003119)	GAL3ST2 (ENSHGLG00000003311)	NEU4 (ENSHGLG00000003691)	PDCD1 (ENSHGLG00000032677)	ENSHGLG00000004109	ENSHGLG00000038816	ENSHGLG00000000610	ENSHGLG00000041212	TSPYL4 (ENSHGLG00000036673)	DSE (ENSHGLG00000041966)	CALHM6 (ENSHGLG00000033792) ##20	TRAPPC3L (ENSHGLG00000002142)	CALHM5 (ENSHGLG00000035655) ##20	CALHM4 (ENSHGLG00000002679) ##20	ENSHGLG00000002331	ENSHGLG00000019728	ENSHGLG00000019671	ENSHGLG00000019674	ENSHGLG00000000164	ENSHGLG00000050432	ENSHGLG00000002101	ENSHGLG00000017890	ENSHGLG00000047673	ENSHGLG00000050169	ENSHGLG00000034017	CHAMP1 (ENSHGLG00000019874)	ENSHGLG00000040146	ENSHGLG00000034132
Hystricomorpha_a	ANCESTRAL SPECIES	46	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Hystricomorpha_b	ANCESTRAL SPECIES	121					ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168
Long-tailed chinchilla	MODERN SPECIES	233	CCN6 (ENSCLAG00000000109)	TUBE1 (ENSCLAG00000000067)	FAM229B (ENSCLAG00000000365)	LAMA4 (ENSCLAG00000000130)	ENSCLAG00000000080	ENSCLAG00000000058	ENSCLAG00000017382	ENSCLAG00000000824	HDAC2 (ENSCLAG00000000749)	ENSCLAG00000000682	HS3ST5 (ENSCLAG00000000666)	FRK (ENSCLAG00000000628)	ENSCLAG00000000565	NT5DC1 (ENSCLAG00000000283)	DSE (ENSCLAG00000000219)	CALHM5 (ENSCLAG00000000210) ##20	TRAPPC3L (ENSCLAG00000000221)	CALHM4 (ENSCLAG00000000213) ##20	ENSCLAG00000000206
Guinea pig	MODERN SPECIES	58	REV3L (ENSCPOG00000024631)	TRAF3IP2 (ENSCPOG00000012814)	FYN (ENSCPOG00000012822)	CCN6 (ENSCPOG00000004828)	TUBE1 (ENSCPOG00000004829)	FAM229B (ENSCPOG00000031930)	LAMA4 (ENSCPOG00000006325)	HDAC2 (ENSCPOG00000014344)	HS3ST5 (ENSCPOG00000031109)	FRK (ENSCPOG00000006954)	ENSCPOG00000009416	NT5DC1 (ENSCPOG00000009411)	TSPYL1 (ENSCPOG00000022929)	ENSCPOG00000035087	DSE (ENSCPOG00000003402)	CALHM5 (ENSCPOG00000036158) ##20	TRAPPC3L (ENSCPOG00000012848)	CALHM4 (ENSCPOG00000012855) ##20	RWDD1 (ENSCPOG00000038110)	ENSCPOG00000004731	SMOC2 (ENSCPOG00000008023)	THBS2 (ENSCPOG00000027034)	WDR27 (ENSCPOG00000011113)	C6orf120 (ENSCPOG00000027368)	PHF10 (ENSCPOG00000022409)	DYNLT2 (ENSCPOG00000037938)	ERMARD (ENSCPOG00000011581)	DLL1 (ENSCPOG00000024133)	FAM120B (ENSCPOG00000032998)	PSMB1 (ENSCPOG00000001187)	TBP (ENSCPOG00000039966)
Rodentia_B	ANCESTRAL SPECIES	18	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Kangaroo rat	MODERN SPECIES	476	Rev3l (ENSDORG00000000703)	ENSDORG00000010688	Fyn (ENSDORG00000016706)	Ccn6 (ENSDORG00000012026)	ENSDORG00000012029	Fam229b (ENSDORG00000012031)	Lama4 (ENSDORG00000012032)	Hdac2 (ENSDORG00000013317)	Hs3st5 (ENSDORG00000028438)	Frk (ENSDORG00000000702)	ENSDORG00000010312	Nt5dc1 (ENSDORG00000010307)	Tspyl4 (ENSDORG00000027297)	Dse (ENSDORG00000012764)	Calhm6 (ENSDORG00000012765) ##20	Calhm5 (ENSDORG00000012771) ##20	Trappc3l (ENSDORG00000012769)	Calhm4 (ENSDORG00000012772) ##20	Rwdd1 (ENSDORG00000012373)	ENSDORG00000025806	Rsph4a (ENSDORG00000003944)	Zup1 (ENSDORG00000003947)	ENSDORG00000015949	Fam162b (ENSDORG00000024159)	Gprc6a (ENSDORG00000013585)	Rfx6 (ENSDORG00000013591)	Vgll2 (ENSDORG00000016343)	Ros1 (ENSDORG00000007167)	Dcbld1 (ENSDORG00000015776)	Gopc (ENSDORG00000015778)	Nepn (ENSDORG00000026879)
Myomorpha	ANCESTRAL SPECIES	21	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Lesser Egyptian jerboa	MODERN SPECIES	78	ENSJJAG00000020576	ENSJJAG00000024023	Rev3l (ENSJJAG00000000424)	ENSJJAG00000003050	Fyn (ENSJJAG00000019918)	Lama4 (ENSJJAG00000015844)	ENSJJAG00000024370	Hdac2 (ENSJJAG00000006043)	Hs3st5 (ENSJJAG00000016015)	ENSJJAG00000018330	Frk (ENSJJAG00000012534)	ENSJJAG00000021831	Tspyl4 (ENSJJAG00000003740)	Tspyl1 (ENSJJAG00000004543)	Dse (ENSJJAG00000009728)	Calhm5 (ENSJJAG00000000846) ##20	Calhm4 (ENSJJAG00000015260) ##20	ENSJJAG00000020421
Muroidea	ANCESTRAL SPECIES	22	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00940000154319.u.a	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Chinese hamster chok1gshd	MODERN SPECIES	160	Ccn6 (ENSCGRG00001011722)	Tube1 (ENSCGRG00001012631)	Fam229b (ENSCGRG00001012149)	Lama4 (ENSCGRG00001023009)	Marcks (ENSCGRG00001020371)	Hdac2 (ENSCGRG00001016612)	Hs3st5 (ENSCGRG00001015101)	ENSCGRG00001014662	Frk (ENSCGRG00001012098)	Col10a1 (ENSCGRG00001011438)	Nt5dc1 (ENSCGRG00001019057)	Tspyl4 (ENSCGRG00001015452)	Tspyl1 (ENSCGRG00001016055)	Dse (ENSCGRG00001016755)	Calhm6 (ENSCGRG00001016166) ##20	Calhm5 (ENSCGRG00001015860) ##20	Trappc3l (ENSCGRG00001001357)	Calhm4 (ENSCGRG00001000585) ##20	Rwdd1 (ENSCGRG00001000262)	ENSCGRG00001022958	ENSCGRG00001022688	Rsph4a (ENSCGRG00001022255)	Zup1 (ENSCGRG00001019649)	ENSCGRG00001017023	Fam162b (ENSCGRG00001013690)	Gprc6a (ENSCGRG00001019351)	Rfx6 (ENSCGRG00001013519)	ENSCGRG00001016423	Vgll2 (ENSCGRG00001012605)	ENSCGRG00001008034	Ros1 (ENSCGRG00001019975)
Golden Hamster	MODERN SPECIES	655	Tube1 (ENSMAUG00000008915)	Fam229b (ENSMAUG00000019053)	Lama4 (ENSMAUG00000008791)	Marcks (ENSMAUG00000014455)	ENSMAUG00000006781	Hdac2 (ENSMAUG00000020410)	Hs3st5 (ENSMAUG00000011520)	Frk (ENSMAUG00000011561)	Nt5dc1 (ENSMAUG00000018298)	Col10a1 (ENSMAUG00000021181)	Tspyl4 (ENSMAUG00000007306)	Tspyl1 (ENSMAUG00000018330)	Dse (ENSMAUG00000020240)	Calhm6 (ENSMAUG00000002308) ##20	Trappc3l (ENSMAUG00000004214)	Calhm5 (ENSMAUG00000014804) ##20	Calhm4 (ENSMAUG00000020546) ##20	Rwdd1 (ENSMAUG00000001504)	ENSMAUG00000009333	Rsph4a (ENSMAUG00000009247)	Zup1 (ENSMAUG00000012807)	ENSMAUG00000009856	Fam162b (ENSMAUG00000012733)	Rfx6 (ENSMAUG00000002997)	ENSMAUG00000007444	Vgll2 (ENSMAUG00000019922)	Ros1 (ENSMAUG00000016942)	Dcbld1 (ENSMAUG00000010738)	Gopc (ENSMAUG00000007546)	Nepn (ENSMAUG00000018286)	Nus1 (ENSMAUG00000019803)
Cricetidae_B	ANCESTRAL SPECIES	21	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Prairie vole	MODERN SPECIES	358	Tube1 (ENSMOCG00000012627)	Fam229b (ENSMOCG00000011348)	Lama4 (ENSMOCG00000007325)	ENSMOCG00000014007	Marcks (ENSMOCG00000011957)	ENSMOCG00000007938	Hs3st5 (ENSMOCG00000006907)	ENSMOCG00000021869	Frk (ENSMOCG00000011544)	ENSMOCG00000018965	Nt5dc1 (ENSMOCG00000011487)	Tspyl4 (ENSMOCG00000006852)	Tspyl1 (ENSMOCG00000007884)	Dse (ENSMOCG00000021598)	Calhm6 (ENSMOCG00000017769) ##20	Calhm5 (ENSMOCG00000011633) ##20	Trappc3l (ENSMOCG00000011302)	Calhm4 (ENSMOCG00000004418) ##20	ENSMOCG00000002869	ENSMOCG00000021945	Grik2 (ENSMOCG00000022205)	Ascc3 (ENSMOCG00000004549)	Sim1 (ENSMOCG00000017754)	ENSMOCG00000008070	Ppp1r14c (ENSMOCG00000002551)	Iyd (ENSMOCG00000012475)	Plekhg1 (ENSMOCG00000006027)	Mthfd1l (ENSMOCG00000011918)	ENSMOCG00000019373	Zbtb2 (ENSMOCG00000018175)	Rmnd1 (ENSMOCG00000012373)
Northern American deer mouse	MODERN SPECIES	7	Tube1 (ENSPEMG00000019866)	Fam229b (ENSPEMG00000029065)	Lama4 (ENSPEMG00000019628)	ENSPEMG00000014821	Hdac2 (ENSPEMG00000019358)	Hs3st5 (ENSPEMG00000027903)	ENSPEMG00000027759	Frk (ENSPEMG00000027385)	Nt5dc1 (ENSPEMG00000020069)	Col10a1 (ENSPEMG00000019392)	Tspyl4 (ENSPEMG00000031222)	Tspyl1 (ENSPEMG00000019621)	Dse (ENSPEMG00000019781)	Calhm6 (ENSPEMG00000019812) ##20	Trappc3l (ENSPEMG00000019941)	Calhm5 (ENSPEMG00000019478) ##20	Calhm4 (ENSPEMG00000017719) ##20	Rwdd1 (ENSPEMG00000000119)	ENSPEMG00000010482	Rsph4a (ENSPEMG00000015392)	Zup1 (ENSPEMG00000019963)	ENSPEMG00000021071	Fam162b (ENSPEMG00000022270)	Gprc6a (ENSPEMG00000021921)	Rfx6 (ENSPEMG00000013570)	ENSPEMG00000028021	Vgll2 (ENSPEMG00000011624)	Ros1 (ENSPEMG00000018962)	Dcbld1 (ENSPEMG00000023463)	Gopc (ENSPEMG00000017950)	ENSPEMG00000028213
Murinae	ANCESTRAL SPECIES	36	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000003880.b.b
Mus	ANCESTRAL SPECIES	15	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000003880.b.b	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141	ENSGT00510000047616.b
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000156772.`b	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000163953	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00390000003880.b.b	ENSGT00390000008232	ENSGT00500000044869.a.a	ENSGT00940000156772.ab	ENSGT00940000156772.`b	ENSGT00940000157632	ENSGT00510000049207	ENSGT00940000160565	ENSGT00730000111285	ENSGT00940000159202	ENSGT00390000009937	ENSGT00940000160636	ENSGT00940000155141
Steppe mouse	MODERN SPECIES	2637									Frk (ENSMSIG00000029824)	Col10a1 (ENSMSIG00000029818)	Nt5dc1 (ENSMSIG00000029807)	Tspyl4 (ENSMSIG00000029805)	Tspyl1 (ENSMSIG00000029804)	Dse (ENSMSIG00000029795)	Calhm6 (ENSMSIG00000029790) ##20	Calhm5 (ENSMSIG00000029788) ##20	Trappc3l (ENSMSIG00000029785)	Calhm4 (ENSMSIG00000029784) ##20	ENSMSIG00000029781
spretus	MODERN SPECIES	1	Ccn6 (MGP_SPRETEiJ_G0016054)	Tube1 (MGP_SPRETEiJ_G0016053)	Fam229b (MGP_SPRETEiJ_G0016052)	Lama4 (MGP_SPRETEiJ_G0016051)	Rfpl4b (MGP_SPRETEiJ_G0016050)	Marcks (MGP_SPRETEiJ_G0016049)	Hdac2 (MGP_SPRETEiJ_G0016048)	Hs3st5 (MGP_SPRETEiJ_G0016047)	Frk (MGP_SPRETEiJ_G0016046)	Col10a1 (MGP_SPRETEiJ_G0016045)	Nt5dc1 (MGP_SPRETEiJ_G0016044)	Tspyl4 (MGP_SPRETEiJ_G0016043)	Tspyl1 (MGP_SPRETEiJ_G0016042)	Dse (MGP_SPRETEiJ_G0016041)	Calhm6 (MGP_SPRETEiJ_G0016040) ##20	Calhm5 (MGP_SPRETEiJ_G0016039) ##20	Calhm4 (MGP_SPRETEiJ_G0016038) ##20	Trappc3l (MGP_SPRETEiJ_G0016037)	Rwdd1 (MGP_SPRETEiJ_G0016036)	MGP_SPRETEiJ_G0016035	Zup1 (MGP_SPRETEiJ_G0016034)	Rsph4a (MGP_SPRETEiJ_G0016033)	Sult3a1 (MGP_SPRETEiJ_G0016032)	MGP_SPRETEiJ_G0016031	Clvs2 (MGP_SPRETEiJ_G0016030)	Trdn (MGP_SPRETEiJ_G0016029)	Nkain2 (MGP_SPRETEiJ_G0016028)	Rnf217 (MGP_SPRETEiJ_G0016027)	Tpd52l1 (MGP_SPRETEiJ_G0016026)	Hddc2 (MGP_SPRETEiJ_G0016025)	Hey2 (MGP_SPRETEiJ_G0016024)
Mouse	MODERN SPECIES	1	Tube1 (ENSMUSG00000019845)	Fam229b (ENSMUSG00000051736)	Lama4 (ENSMUSG00000019846)	Rfpl4b (ENSMUSG00000094311)	Marcks (ENSMUSG00000069662)	Hdac2 (ENSMUSG00000019777)	Hs3st5 (ENSMUSG00000044499)	Amd2 (ENSMUSG00000063953)	Frk (ENSMUSG00000019779)	Col10a1 (ENSMUSG00000039462)	Tspyl4 (ENSMUSG00000039485)	Nt5dc1 (ENSMUSG00000039480)	Tspyl1 (ENSMUSG00000047514)	Dse (ENSMUSG00000039497)	Calhm6 (ENSMUSG00000046031) ##20	Calhm5 (ENSMUSG00000049872) ##20	Calhm4 (ENSMUSG00000039508) ##20	Trappc3l (ENSMUSG00000071340)	Rwdd1 (ENSMUSG00000019782)	Zup1 (ENSMUSG00000039531)	Rsph4a (ENSMUSG00000039552)	Sult3a1 (ENSMUSG00000069668)	Sult3a2 (ENSMUSG00000090298)	Clvs2 (ENSMUSG00000019785)	Trdn (ENSMUSG00000019787)	Nkain2 (ENSMUSG00000069670)	Rnf217 (ENSMUSG00000063760)	Tpd52l1 (ENSMUSG00000000296)	Hddc2 (ENSMUSG00000000295)	Hey2 (ENSMUSG00000019789)	Ncoa7 (ENSMUSG00000039697)
Ryukyu mouse	MODERN SPECIES	1	Ccn6 (MGP_CAROLIEiJ_G0015245)	Tube1 (MGP_CAROLIEiJ_G0015244)	Fam229b (MGP_CAROLIEiJ_G0015243)	Lama4 (MGP_CAROLIEiJ_G0015242)	Rfpl4b (MGP_CAROLIEiJ_G0015241)	Marcks (MGP_CAROLIEiJ_G0015240)	Hdac2 (MGP_CAROLIEiJ_G0015239)	Hs3st5 (MGP_CAROLIEiJ_G0015238)	Frk (MGP_CAROLIEiJ_G0015237)	Col10a1 (MGP_CAROLIEiJ_G0015236)	Tspyl4 (MGP_CAROLIEiJ_G0015235)	Nt5dc1 (MGP_CAROLIEiJ_G0015234)	Tspyl1 (MGP_CAROLIEiJ_G0015233)	Dse (MGP_CAROLIEiJ_G0015232)	Calhm6 (MGP_CAROLIEiJ_G0015231) ##20	Calhm5 (MGP_CAROLIEiJ_G0015230) ##20	Calhm4 (MGP_CAROLIEiJ_G0015229) ##20	Trappc3l (MGP_CAROLIEiJ_G0015228)	Rwdd1 (MGP_CAROLIEiJ_G0015227)	MGP_CAROLIEiJ_G0015226	Zup1 (MGP_CAROLIEiJ_G0015225)	Rsph4a (MGP_CAROLIEiJ_G0015224)	MGP_CAROLIEiJ_G0015223	Sult3a1 (MGP_CAROLIEiJ_G0015222)	Clvs2 (MGP_CAROLIEiJ_G0015221)	Trdn (MGP_CAROLIEiJ_G0015220)	Nkain2 (MGP_CAROLIEiJ_G0015219)	Rnf217 (MGP_CAROLIEiJ_G0015218)	Tpd52l1 (MGP_CAROLIEiJ_G0015217)	Hddc2 (MGP_CAROLIEiJ_G0015216)	Hey2 (MGP_CAROLIEiJ_G0015215)
Shrew mouse	MODERN SPECIES	22	Ccn6 (MGP_PahariEiJ_G0030662)	Tube1 (MGP_PahariEiJ_G0030661)	Fam229b (MGP_PahariEiJ_G0030660)	Lama4 (MGP_PahariEiJ_G0030659)	Rfpl4b (MGP_PahariEiJ_G0030658)	Marcks (MGP_PahariEiJ_G0030657)	Hdac2 (MGP_PahariEiJ_G0030656)	Hs3st5 (MGP_PahariEiJ_G0030655)	Frk (MGP_PahariEiJ_G0030654)	Col10a1 (MGP_PahariEiJ_G0030653)	Tspyl4 (MGP_PahariEiJ_G0030652)	Nt5dc1 (MGP_PahariEiJ_G0030651)	Tspyl1 (MGP_PahariEiJ_G0030650)	Dse (MGP_PahariEiJ_G0030649)	MGP_PahariEiJ_G0030648 ##20	Calhm5 (MGP_PahariEiJ_G0030647) ##20	Calhm4 (MGP_PahariEiJ_G0030646) ##20	Trappc3l (MGP_PahariEiJ_G0030645)	Rwdd1 (MGP_PahariEiJ_G0030644)	MGP_PahariEiJ_G0030643	Zup1 (MGP_PahariEiJ_G0030642)	Rsph4a (MGP_PahariEiJ_G0030641)	MGP_PahariEiJ_G0030640
Rat	MODERN SPECIES	12	P4ha1 (ENSRNOG00000050655)	Snrpd2l (ENSRNOG00000048758)	Sowahc (ENSRNOG00000064749)	Septin10 (ENSRNOG00000049507)	ENSRNOG00000068135	Sh3rf3 (ENSRNOG00000046791)	Edar (ENSRNOG00000028598)	Ccdc138 (ENSRNOG00000028581)	ENSRNOG00000064170	Ranbp2 (ENSRNOG00000000796)	Lims1 (ENSRNOG00000037765)	Gcc2 (ENSRNOG00000000823)	ENSRNOG00000069923	Dse (ENSRNOG00000000824)	Calhm6 (ENSRNOG00000037757) ##20	Calhm5 (ENSRNOG00000000825) ##20	Calhm4 (ENSRNOG00000000580) ##20	Trappc3l (ENSRNOG00000031290)	Rwdd1 (ENSRNOG00000042916)	Tet1 (ENSRNOG00000000277)	LOC103694416 (ENSRNOG00000051063)	Dna2 (ENSRNOG00000000387)	Rufy2 (ENSRNOG00000065563)	Hnrnph3 (ENSRNOG00000048193)	Ak6 (ENSRNOG00000026813)	Pbld2 (ENSRNOG00000069854)	Pbld1 (ENSRNOG00000000386)	Atoh7 (ENSRNOG00000000384)	Mypn (ENSRNOG00000000383)	Herc4 (ENSRNOG00000061040)	Sirt1 (ENSRNOG00000051592)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1622									Frk (ENSNGAG00000023884)	ENSNGAG00000019635	Nt5dc1 (ENSNGAG00000017414)	Tspyl4 (ENSNGAG00000013340)	Tspyl1 (ENSNGAG00000002957)	Dse (ENSNGAG00000023284)	Calhm6 (ENSNGAG00000022608) ##20	Calhm5 (ENSNGAG00000021647) ##20	Trappc3l (ENSNGAG00000020430)	Calhm4 (ENSNGAG00000011668) ##20	ENSNGAG00000022138	ENSNGAG00000021507	ENSNGAG00000023845	ENSNGAG00000023286	Rsph4a (ENSNGAG00000022773)	Zup1 (ENSNGAG00000020874)
Primates	ANCESTRAL SPECIES	5	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Strepsirrhini	ANCESTRAL SPECIES	7	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Lemuriformes	ANCESTRAL SPECIES	3	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914
Lemuriformes_a	ANCESTRAL SPECIES	63	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000163953	ENSGT00940000155676	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Coquerels sifaka	MODERN SPECIES	445										FRK (ENSPCOG00000016754)	ENSPCOG00000017572	NT5DC1 (ENSPCOG00000019513)	TSPYL1 (ENSPCOG00000020616)	DSE (ENSPCOG00000017942)	CALHM6 (ENSPCOG00000015099) ##20	CALHM5 (ENSPCOG00000020027) ##20	TRAPPC3L (ENSPCOG00000018449)	CALHM4 (ENSPCOG00000027369) ##20	RSPH4A (ENSPCOG00000006824)	ZUP1 (ENSPCOG00000021558)	KPNA5 (ENSPCOG00000016943)	GPRC6A (ENSPCOG00000013226)	ENSPCOG00000024330	RFX6 (ENSPCOG00000024904)	VGLL2 (ENSPCOG00000017437)	ROS1 (ENSPCOG00000018293)	DCBLD1 (ENSPCOG00000023692)	GOPC (ENSPCOG00000028025)	ENSPCOG00000019234	NUS1 (ENSPCOG00000020589)
Greater bamboo lemur	MODERN SPECIES	117	LAMA4 (ENSPSMG00000025055)	ENSPSMG00000025088	MARCKS (ENSPSMG00000025094)	ENSPSMG00000025097	HDAC2 (ENSPSMG00000025136)	HS3ST5 (ENSPSMG00000025147)	FRK (ENSPSMG00000025161)	NT5DC1 (ENSPSMG00000025168)	ENSPSMG00000025170	TSPYL4 (ENSPSMG00000025171)	ENSPSMG00000025176	ENSPSMG00000025178	DSE (ENSPSMG00000025197)	CALHM6 (ENSPSMG00000025201) ##20	TRAPPC3L (ENSPSMG00000025203)	CALHM5 (ENSPSMG00000025204) ##20	CALHM4 (ENSPSMG00000025205) ##20	RWDD1 (ENSPSMG00000025211)	ENSPSMG00000025216	ENSPSMG00000025223	RSPH4A (ENSPSMG00000025239)	ZUP1 (ENSPSMG00000025258)	KPNA5 (ENSPSMG00000025274)	FAM162B (ENSPSMG00000025283)	GPRC6A (ENSPSMG00000025285)	RFX6 (ENSPSMG00000025293)
Mouse lemur	MODERN SPECIES	28	ENSMICG00000042685	FYN (ENSMICG00000008716)	CCN6 (ENSMICG00000008735)	TUBE1 (ENSMICG00000047219)	FAM229B (ENSMICG00000043291)	LAMA4 (ENSMICG00000008751)	MARCKS (ENSMICG00000026883)	HDAC2 (ENSMICG00000000261)	HS3ST5 (ENSMICG00000027940)	FRK (ENSMICG00000003603)	ENSMICG00000046212	NT5DC1 (ENSMICG00000003606)	TSPYL1 (ENSMICG00000044487)	DSE (ENSMICG00000008111)	CALHM6 (ENSMICG00000032074) ##20	CALHM5 (ENSMICG00000008119) ##20	TRAPPC3L (ENSMICG00000008115)	CALHM4 (ENSMICG00000008123) ##20	ENSMICG00000036368	ENSMICG00000032805	MMUT (ENSMICG00000008076)	CENPQ (ENSMICG00000042405)	GLYATL3 (ENSMICG00000002636)	ENSMICG00000046680	RHAG (ENSMICG00000008366)	CRISP2 (ENSMICG00000014964)	CRISP3 (ENSMICG00000002617)	CRISP1 (ENSMICG00000002786)	DEFB114 (ENSMICG00000044264)	DEFB113 (ENSMICG00000032756)	DEFB110 (ENSMICG00000047331)
Bushbaby	MODERN SPECIES	117	LAMA4 (ENSOGAG00000011205)	ENSOGAG00000031703	ENSOGAG00000025253	ENSOGAG00000028073	HDAC2 (ENSOGAG00000011016)	HS3ST5 (ENSOGAG00000011023)	FRK (ENSOGAG00000009140)	NT5DC1 (ENSOGAG00000009142)	COL10A1 (ENSOGAG00000024717)	TSPYL4 (ENSOGAG00000031495)	TSPYL1 (ENSOGAG00000001189)	ENSOGAG00000025070	DSE (ENSOGAG00000001191)	CALHM6 (ENSOGAG00000032372) ##20	TRAPPC3L (ENSOGAG00000014677)	CALHM5 (ENSOGAG00000014679) ##20	CALHM4 (ENSOGAG00000014682) ##20	RWDD1 (ENSOGAG00000014683)	ENSOGAG00000025916	ENSOGAG00000030595	RSPH4A (ENSOGAG00000011917)	ZUP1 (ENSOGAG00000011921)	KPNA5 (ENSOGAG00000011924)	FAM162B (ENSOGAG00000011931)	GPRC6A (ENSOGAG00000011933)	RFX6 (ENSOGAG00000011937)	VGLL2 (ENSOGAG00000031570)	ROS1 (ENSOGAG00000005027)	GOPC (ENSOGAG00000014241)	ENSOGAG00000025632	ENSOGAG00000001894
Haplorrhini	ANCESTRAL SPECIES	2	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Simiiformes	ANCESTRAL SPECIES	5	ENSGT00940000163194	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223	ENSGT00390000015655.b
Catarrhini	ANCESTRAL SPECIES	5	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b
Hominoidea	ANCESTRAL SPECIES	4	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b
Hominidae	ANCESTRAL SPECIES	5	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	4	ENSGT00910000148685	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b
Gorilla	MODERN SPECIES	19	ENSGGOG00000037075	ENSGGOG00000006107	HDAC2 (ENSGGOG00000005428)	HS3ST5 (ENSGGOG00000001108)	FRK (ENSGGOG00000034876)	ENSGGOG00000039649	NT5DC1 (ENSGGOG00000007465)	COL10A1 (ENSGGOG00000023907)	ENSGGOG00000037308	TSPYL4 (ENSGGOG00000025875)	ENSGGOG00000024360	TSPYL1 (ENSGGOG00000016740)	DSE (ENSGGOG00000026746)	CALHM6 (ENSGGOG00000001375) ##20	TRAPPC3L (ENSGGOG00000036719)	CALHM5 (ENSGGOG00000039336) ##20	CALHM4 (ENSGGOG00000017144) ##20	RWDD1 (ENSGGOG00000026889)	ENSGGOG00000016793	ZUP1 (ENSGGOG00000016798)	KPNA5 (ENSGGOG00000011906)	FAM162B (ENSGGOG00000002045)	GPRC6A (ENSGGOG00000001199)	RFX6 (ENSGGOG00000006982)	VGLL2 (ENSGGOG00000014045)	ROS1 (ENSGGOG00000014048)	DCBLD1 (ENSGGOG00000001188)	GOPC (ENSGGOG00000013555)	NUS1 (ENSGGOG00000022321)	SLC35F1 (ENSGGOG00000014788)	CEP85L (ENSGGOG00000003828)
Homo/Pan group	ANCESTRAL SPECIES	5	ENSGT00910000148685	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u	ENSGT00390000015655.b
Pan	ANCESTRAL SPECIES	5	ENSGT00910000148685	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00390000013354.d.a.a.b	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00910000148903	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223.u.a	ENSGT00390000015655.b
Chimpanzee	MODERN SPECIES	19	MARCKS (ENSPTRG00000018517)	HDAC2 (ENSPTRG00000018519)	HS3ST5 (ENSPTRG00000018520)	ENSPTRG00000051719	FRK (ENSPTRG00000018521)	ENSPTRG00000045932	NT5DC1 (ENSPTRG00000018523)	COL10A1 (ENSPTRG00000018524)	ENSPTRG00000048668	TSPYL4 (ENSPTRG00000023905)	ENSPTRG00000051033	TSPYL1 (ENSPTRG00000018528)	DSE (ENSPTRG00000018529)	TRAPPC3L (ENSPTRG00000050736)	CALHM6 (ENSPTRG00000018530) ##20	CALHM5 (ENSPTRG00000048761) ##20	CALHM4 (ENSPTRG00000018532) ##20	RWDD1 (ENSPTRG00000018534)	RSPH4A (ENSPTRG00000018535)	ZUP1 (ENSPTRG00000018536)	KPNA5 (ENSPTRG00000018537)	FAM162B (ENSPTRG00000018538)	GPRC6A (ENSPTRG00000018539)	RFX6 (ENSPTRG00000018540)	VGLL2 (ENSPTRG00000018542)	ROS1 (ENSPTRG00000018544)	DCBLD1 (ENSPTRG00000018545)	GOPC (ENSPTRG00000018546)	ENSPTRG00000044107	ENSPTRG00000018547	SLC35F1 (ENSPTRG00000018548)
Bonobo	MODERN SPECIES	19	ENSPPAG00000043260	HDAC2 (ENSPPAG00000033144)	HS3ST5 (ENSPPAG00000026905)	ENSPPAG00000037500	FRK (ENSPPAG00000037662)	ENSPPAG00000009764	ENSPPAG00000008350	COL10A1 (ENSPPAG00000029466)	ENSPPAG00000034902	TSPYL4 (ENSPPAG00000025665)	ENSPPAG00000037203	TSPYL1 (ENSPPAG00000010073)	DSE (ENSPPAG00000039304)	CALHM6 (ENSPPAG00000040382) ##20	TRAPPC3L (ENSPPAG00000043671)	CALHM5 (ENSPPAG00000039792) ##20	ENSPPAG00000019471 ##20	RWDD1 (ENSPPAG00000035047)	RSPH4A (ENSPPAG00000039243)	ZUP1 (ENSPPAG00000026765)	KPNA5 (ENSPPAG00000033134)	FAM162B (ENSPPAG00000042060)	GPRC6A (ENSPPAG00000032903)	RFX6 (ENSPPAG00000010113)	VGLL2 (ENSPPAG00000043248)	ROS1 (ENSPPAG00000040274)	DCBLD1 (ENSPPAG00000030913)	GOPC (ENSPPAG00000042271)	ENSPPAG00000017927	SLC35F1 (ENSPPAG00000027433)	CEP85L (ENSPPAG00000031277)
Human	MODERN SPECIES	18	LAMA4 (ENSG00000112769)	ENSG00000281613	RFPL4B (ENSG00000251258)	MARCKS (ENSG00000277443)	HDAC2 (ENSG00000196591)	HS3ST5 (ENSG00000249853)	FRK (ENSG00000111816)	NT5DC1 (ENSG00000178425)	COL10A1 (ENSG00000123500)	TSPYL4 (ENSG00000187189)	DSE (ENSG00000111817)	TSPYL1 (ENSG00000189241)	ENSG00000285446	CALHM6 (ENSG00000188820) ##20	TRAPPC3L (ENSG00000173626)	CALHM5 (ENSG00000178033) ##20	CALHM4 (ENSG00000164451) ##20	RWDD1 (ENSG00000111832)	RSPH4A (ENSG00000111834)	ZUP1 (ENSG00000153975)	KPNA5 (ENSG00000196911)	FAM162B (ENSG00000183807)	GPRC6A (ENSG00000173612)	RFX6 (ENSG00000185002)	VGLL2 (ENSG00000170162)	ROS1 (ENSG00000047936)	ENSG00000282218	DCBLD1 (ENSG00000164465)	GOPC (ENSG00000047932)	NUS1 (ENSG00000153989)	SLC35F1 (ENSG00000196376)
Orangutan	MODERN SPECIES	19	ENSPPYG00000016937	MARCKS (ENSPPYG00000035269)	ENSPPYG00000016939	HDAC2 (ENSPPYG00000016940)	HS3ST5 (ENSPPYG00000039787)	FRK (ENSPPYG00000016942)	NT5DC1 (ENSPPYG00000016943)	COL10A1 (ENSPPYG00000016944)	ENSPPYG00000035177	TSPYL4 (ENSPPYG00000040233)	ENSPPYG00000035461	TSPYL1 (ENSPPYG00000035346)	DSE (ENSPPYG00000016948)	CALHM6 (ENSPPYG00000016949) ##20	TRAPPC3L (ENSPPYG00000016950)	CALHM5 (ENSPPYG00000016951) ##20	CALHM4 (ENSPPYG00000016952) ##20	RWDD1 (ENSPPYG00000016953)	RSPH4A (ENSPPYG00000016954)	ZUP1 (ENSPPYG00000016956)	KPNA5 (ENSPPYG00000016957)	FAM162B (ENSPPYG00000016958)	GPRC6A (ENSPPYG00000016959)	RFX6 (ENSPPYG00000016960)	VGLL2 (ENSPPYG00000016961)	ROS1 (ENSPPYG00000016962)	DCBLD1 (ENSPPYG00000016963)	GOPC (ENSPPYG00000016964)	NUS1 (ENSPPYG00000025886)	SLC35F1 (ENSPPYG00000016966)	CEP85L (ENSPPYG00000016967)
Gibbon	MODERN SPECIES	18	FAM229B (ENSNLEG00000012997)	LAMA4 (ENSNLEG00000013000)	MARCKS (ENSNLEG00000034431)	HDAC2 (ENSNLEG00000013058)	HS3ST5 (ENSNLEG00000013070)	FRK (ENSNLEG00000013075)	NT5DC1 (ENSNLEG00000013080)	COL10A1 (ENSNLEG00000013102)	TSPYL4 (ENSNLEG00000013105)	ENSNLEG00000018478	TSPYL1 (ENSNLEG00000019148)	DSE (ENSNLEG00000013106)	ENSNLEG00000032216	CALHM6 (ENSNLEG00000013120) ##20	TRAPPC3L (ENSNLEG00000013121)	CALHM5 (ENSNLEG00000013129) ##20	CALHM4 (ENSNLEG00000028191) ##20	RWDD1 (ENSNLEG00000013133)	RSPH4A (ENSNLEG00000013151)	ZUP1 (ENSNLEG00000013173)	KPNA5 (ENSNLEG00000013209)	ENSNLEG00000013253	ENSNLEG00000013257	RFX6 (ENSNLEG00000013258)	VGLL2 (ENSNLEG00000013293)	ROS1 (ENSNLEG00000013311)	DCBLD1 (ENSNLEG00000013410)	GOPC (ENSNLEG00000013426)	NUS1 (ENSNLEG00000029327)	SLC35F1 (ENSNLEG00000013471)	ENSNLEG00000028147
Cercopithecidae	ANCESTRAL SPECIES	4	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT01030000237275
Cercopithecinae	ANCESTRAL SPECIES	6	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT01030000237275
Vervet Monkey	MODERN SPECIES	4	FAM229B (ENSCSAG00000015632)	LAMA4 (ENSCSAG00000015643)	ENSCSAG00000015668	RFPL4B (ENSCSAG00000018974)	MARCKS (ENSCSAG00000015680)	HDAC2 (ENSCSAG00000015692)	HS3ST5 (ENSCSAG00000015695)	FRK (ENSCSAG00000015700)	COL10A1 (ENSCSAG00000015703)	ENSCSAG00000015707	NT5DC1 (ENSCSAG00000015718)	TSPYL4 (ENSCSAG00000018973)	TSPYL1 (ENSCSAG00000018972)	DSE (ENSCSAG00000015723)	CALHM6 (ENSCSAG00000015726) ##20	CALHM5 (ENSCSAG00000015732) ##20	TRAPPC3L (ENSCSAG00000015735)	CALHM4 (ENSCSAG00000015763) ##20	RWDD1 (ENSCSAG00000015772)	RSPH4A (ENSCSAG00000015777)	ZUP1 (ENSCSAG00000015785)	KPNA5 (ENSCSAG00000015794)	FAM162B (ENSCSAG00000015801)	GPRC6A (ENSCSAG00000015844)	RFX6 (ENSCSAG00000015856)	VGLL2 (ENSCSAG00000015869)	ROS1 (ENSCSAG00000015976)	DCBLD1 (ENSCSAG00000016039)	GOPC (ENSCSAG00000016048)	NUS1 (ENSCSAG00000016053)	SLC35F1 (ENSCSAG00000016059)
Cercopithecinae_a	ANCESTRAL SPECIES	6	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT01030000237275
Macaca	ANCESTRAL SPECIES	9	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00910000147633	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00910000147104
Pig-tailed macaque	MODERN SPECIES	342								FRK (ENSMNEG00000042618)	NT5DC1 (ENSMNEG00000029093)	COL10A1 (ENSMNEG00000021680)	TSPYL4 (ENSMNEG00000028445)	ENSMNEG00000031556	DSE (ENSMNEG00000028181)	CALHM6 (ENSMNEG00000044903) ##20	TRAPPC3L (ENSMNEG00000045331)	CALHM5 (ENSMNEG00000044741) ##20	CALHM4 (ENSMNEG00000029150) ##20	RWDD1 (ENSMNEG00000045094)	RSPH4A (ENSMNEG00000038377)	ZUP1 (ENSMNEG00000031978)	KPNA5 (ENSMNEG00000033544)	FAM162B (ENSMNEG00000032267)	GPRC6A (ENSMNEG00000035336)	RFX6 (ENSMNEG00000037412)	VGLL2 (ENSMNEG00000034485)	ROS1 (ENSMNEG00000044781)	DCBLD1 (ENSMNEG00000045089)	GOPC (ENSMNEG00000041231)	NUS1 (ENSMNEG00000013910)	SLC35F1 (ENSMNEG00000032478)	ENSMNEG00000024765
Macaca_a	ANCESTRAL SPECIES	9	ENSGT00940000159970	ENSGT00960000190362.E.b	ENSGT00950000183105.A.m.a.r.j.a	ENSGT00390000012138.a.a.j.b	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Crab-eating macaque	MODERN SPECIES	14	LAMA4 (ENSMFAG00000037073)	ENSMFAG00000064818	ENSMFAG00000031632	ENSMFAG00000018794	ENSMFAG00000052224	HDAC2 (ENSMFAG00000040542)	HS3ST5 (ENSMFAG00000061930)	ENSMFAG00000063529	ENSMFAG00000047737	FRK (ENSMFAG00000000665)	NT5DC1 (ENSMFAG00000038038)	COL10A1 (ENSMFAG00000038014)	DSE (ENSMFAG00000033289)	CALHM6 (ENSMFAG00000041853) ##20	TRAPPC3L (ENSMFAG00000055248)	CALHM5 (ENSMFAG00000052041) ##20	ENSMFAG00000033309 ##20	RWDD1 (ENSMFAG00000042598)	RSPH4A (ENSMFAG00000038872)	ZUP1 (ENSMFAG00000001086)	KPNA5 (ENSMFAG00000038991)	FAM162B (ENSMFAG00000050195)	GPRC6A (ENSMFAG00000037810)	RFX6 (ENSMFAG00000000913)	ENSMFAG00000039023	ROS1 (ENSMFAG00000001072)	DCBLD1 (ENSMFAG00000033065)	GOPC (ENSMFAG00000032714)	ENSMFAG00000063596	NUS1 (ENSMFAG00000051605)	SLC35F1 (ENSMFAG00000043289)
Rhesus	MODERN SPECIES	14	LAMA4 (ENSMMUG00000013782)	ENSMMUG00000061031	ENSMMUG00000001200	MARCKS (ENSMMUG00000008934)	HDAC2 (ENSMMUG00000008937)	HS3ST5 (ENSMMUG00000050295)	ENSMMUG00000057271	FRK (ENSMMUG00000014635)	NT5DC1 (ENSMMUG00000014638)	COL10A1 (ENSMMUG00000063074)	TSPYL4 (ENSMMUG00000014643)	ENSMMUG00000054037	TSPYL1 (ENSMMUG00000061148)	DSE (ENSMMUG00000007409)	TRAPPC3L (ENSMMUG00000007413)	CALHM5 (ENSMMUG00000007412) ##20	CALHM4 (ENSMMUG00000007414) ##20	RWDD1 (ENSMMUG00000007415)	RSPH4A (ENSMMUG00000001805)	ZUP1 (ENSMMUG00000001806)	KPNA5 (ENSMMUG00000048955)	FAM162B (ENSMMUG00000050688)	GPRC6A (ENSMMUG00000003072)	RFX6 (ENSMMUG00000017189)	VGLL2 (ENSMMUG00000023737)	ROS1 (ENSMMUG00000023738)	DCBLD1 (ENSMMUG00000017558)	NUS1 (ENSMMUG00000059327)	ENSMMUG00000053187	SLC35F1 (ENSMMUG00000022354)	CEP85L (ENSMMUG00000022184)
Cercopithecinae_b	ANCESTRAL SPECIES	17	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.r	ENSGT00940000162991	ENSGT00940000162821	ENSGT00860000136122	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Olive baboon	MODERN SPECIES	16	ENSPANG00000049180	MARCKS (ENSPANG00000023060)	HDAC2 (ENSPANG00000004969)	HS3ST5 (ENSPANG00000020863)	ENSPANG00000039146	ENSPANG00000045691	FRK (ENSPANG00000015735)	COL10A1 (ENSPANG00000022055)	NT5DC1 (ENSPANG00000024103)	TSPYL4 (ENSPANG00000035333)	TSPYL1 (ENSPANG00000007994)	ENSPANG00000044294	DSE (ENSPANG00000000826)	ENSPANG00000044624	CALHM6 (ENSPANG00000038049) ##20	CALHM5 (ENSPANG00000006250) ##20	TRAPPC3L (ENSPANG00000024071)	CALHM4 (ENSPANG00000013290) ##20	RWDD1 (ENSPANG00000008148)	RSPH4A (ENSPANG00000006886)	ZUP1 (ENSPANG00000021725)	KPNA5 (ENSPANG00000008670)	FAM162B (ENSPANG00000022513)	GPRC6A (ENSPANG00000024072)	RFX6 (ENSPANG00000008240)	VGLL2 (ENSPANG00000016788)	ROS1 (ENSPANG00000022514)	ENSPANG00000049743	DCBLD1 (ENSPANG00000017288)	GOPC (ENSPANG00000020085)	ENSPANG00000042149
Cercopithecinae_d	ANCESTRAL SPECIES	70	ENSGT00910000147633	ENSGT00940000159970	ENSGT00940000154281.m.b.a.a.a.a	ENSGT00730000111419	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000155676.r	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00860000136122	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00390000003223.u	ENSGT00390000015655.b	ENSGT00620000087993.a.a
Drill	MODERN SPECIES	1413										NT5DC1 (ENSMLEG00000035573)	TSPYL4 (ENSMLEG00000036698)	ENSMLEG00000032841	DSE (ENSMLEG00000028071)	CALHM6 (ENSMLEG00000041324) ##20	TRAPPC3L (ENSMLEG00000028506)	CALHM5 (ENSMLEG00000035316) ##20	CALHM4 (ENSMLEG00000032140) ##20	RWDD1 (ENSMLEG00000011284)	RSPH4A (ENSMLEG00000000631)	ZUP1 (ENSMLEG00000033401)	KPNA5 (ENSMLEG00000041216)	FAM162B (ENSMLEG00000039589)	GPRC6A (ENSMLEG00000033168)	RFX6 (ENSMLEG00000033029)	ENSMLEG00000030294	ROS1 (ENSMLEG00000029082)	DCBLD1 (ENSMLEG00000040426)	GOPC (ENSMLEG00000026392)	NUS1 (ENSMLEG00000035527)	SLC35F1 (ENSMLEG00000012171)	ENSMLEG00000003959
Sooty mangabey	MODERN SPECIES	590	LAMA4 (ENSCATG00000035013)	ENSCATG00000002853	ENSCATG00000033527	ENSCATG00000023134	MARCKS (ENSCATG00000009912)	HDAC2 (ENSCATG00000042591)	HS3ST5 (ENSCATG00000028503)	FRK (ENSCATG00000039585)	NT5DC1 (ENSCATG00000021794)	COL10A1 (ENSCATG00000019945)	TSPYL4 (ENSCATG00000041203)	ENSCATG00000043899	DSE (ENSCATG00000039900)	CALHM6 (ENSCATG00000041474) ##20	TRAPPC3L (ENSCATG00000039208)	CALHM5 (ENSCATG00000013734) ##20	CALHM4 (ENSCATG00000022187) ##20	RWDD1 (ENSCATG00000030010)	RSPH4A (ENSCATG00000031193)	ZUP1 (ENSCATG00000042362)	KPNA5 (ENSCATG00000034707)	FAM162B (ENSCATG00000031733)	GPRC6A (ENSCATG00000038791)	RFX6 (ENSCATG00000034545)	VGLL2 (ENSCATG00000038510)	ROS1 (ENSCATG00000021312)	ENSCATG00000022159	DCBLD1 (ENSCATG00000033783)	GOPC (ENSCATG00000037476)	NUS1 (ENSCATG00000039106)	SLC35F1 (ENSCATG00000039775)
Rhinopithecus	ANCESTRAL SPECIES	472														ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.gb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b
Golden snub-nosed monkey	MODERN SPECIES	1726												DSE (ENSRROG00000033698)	ENSRROG00000022531	CALHM6 (ENSRROG00000024470) ##20	TRAPPC3L (ENSRROG00000036813)	CALHM5 (ENSRROG00000028944) ##20	CALHM4 (ENSRROG00000030193) ##20	RWDD1 (ENSRROG00000034466)	RSPH4A (ENSRROG00000034483)	ZUP1 (ENSRROG00000001608)	KPNA5 (ENSRROG00000007638)	FAM162B (ENSRROG00000002813)	GPRC6A (ENSRROG00000029975)	RFX6 (ENSRROG00000042517)
Black snub-nosed monkey	MODERN SPECIES	1771													DSE (ENSRBIG00000035087)	ENSRBIG00000001662	CALHM6 (ENSRBIG00000007538) ##20	CALHM5 (ENSRBIG00000027627) ##20	TRAPPC3L (ENSRBIG00000028722)	CALHM4 (ENSRBIG00000032541) ##20	ENSRBIG00000023199	RSPH4A (ENSRBIG00000033414)	ZUP1 (ENSRBIG00000042607)	KPNA5 (ENSRBIG00000029401)	FAM162B (ENSRBIG00000032712)	GPRC6A (ENSRBIG00000029856)	RFX6 (ENSRBIG00000044389)
Platyrrhini	ANCESTRAL SPECIES	2	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00390000000970.b.n.a.b	ENSGT00730000111419	ENSGT00900000143015	ENSGT00940000155725	ENSGT00910000147939	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Cebidae	ANCESTRAL SPECIES	5	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723.a	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00900000143015	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Cebidae_a	ANCESTRAL SPECIES	26							ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000155676.q	ENSGT00940000170327	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.b.b ##20	ENSGT00390000009168.eb	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Capuchin	MODERN SPECIES	11									ENSCCAG00000001468	FRK (ENSCCAG00000025087)	COL10A1 (ENSCCAG00000032758)	NT5DC1 (ENSCCAG00000024638)	EIF3H (ENSCCAG00000033678)	DSE (ENSCCAG00000030876)	CALHM6 (ENSCCAG00000029008) ##20	CALHM5 (ENSCCAG00000021913) ##20	TRAPPC3L (ENSCCAG00000035786)	CALHM4 (ENSCCAG00000029702) ##20	RWDD1 (ENSCCAG00000027935)	RSPH4A (ENSCCAG00000007275)	ZUP1 (ENSCCAG00000025061)	KPNA5 (ENSCCAG00000022746)	FAM162B (ENSCCAG00000031118)	GPRC6A (ENSCCAG00000030003)	RFX6 (ENSCCAG00000019715)	VGLL2 (ENSCCAG00000028036)	ROS1 (ENSCCAG00000033956)	ENSCCAG00000027081	DCBLD1 (ENSCCAG00000025349)	ENSCCAG00000028924	ENSCCAG00000024292
Bolivian squirrel monkey	MODERN SPECIES	145			ENSSBOG00000027906	ENSSBOG00000027531	ENSSBOG00000036394	ENSSBOG00000026123	HS3ST5 (ENSSBOG00000025511)	ENSSBOG00000025026	FRK (ENSSBOG00000024353)	COL10A1 (ENSSBOG00000022558)	ENSSBOG00000022050	ENSSBOG00000020743	ENSSBOG00000020332	DSE (ENSSBOG00000019590)	CALHM6 (ENSSBOG00000018753) ##20	CALHM5 (ENSSBOG00000014712) ##20	TRAPPC3L (ENSSBOG00000010873)	CALHM4 (ENSSBOG00000006032) ##20	RWDD1 (ENSSBOG00000029590)	RSPH4A (ENSSBOG00000027685)	ZUP1 (ENSSBOG00000023075)	KPNA5 (ENSSBOG00000020656)	FAM162B (ENSSBOG00000013087)	GPRC6A (ENSSBOG00000034356)	ENSSBOG00000031250	RFX6 (ENSSBOG00000029327)	ENSSBOG00000027243	ROS1 (ENSSBOG00000026173)	DCBLD1 (ENSSBOG00000023384)	GOPC (ENSSBOG00000021757)	ENSSBOG00000028014
Marmoset	MODERN SPECIES	16	LAMA4 (ENSCJAG00000004703)	ENSCJAG00000071609	ENSCJAG00000050876	MARCKS (ENSCJAG00000063272)	HDAC2 (ENSCJAG00000004635)	HS3ST5 (ENSCJAG00000086455)	ENSCJAG00000067023	FRK (ENSCJAG00000004595)	TSPYL4 (ENSCJAG00000034803)	ENSCJAG00000047367	COL10A1 (ENSCJAG00000004589)	TSPYL1 (ENSCJAG00000040079)	DSE (ENSCJAG00000004530)	CALHM6 (ENSCJAG00000004524) ##20	TRAPPC3L (ENSCJAG00000004513)	CALHM5 (ENSCJAG00000059277) ##20	CALHM4 (ENSCJAG00000004499) ##20	ENSCJAG00000004474	RSPH4A (ENSCJAG00000004455)	ZUP1 (ENSCJAG00000004437)	KPNA5 (ENSCJAG00000004394)	ENSCJAG00000072141	FAM162B (ENSCJAG00000055731)	GPRC6A (ENSCJAG00000004373)	RFX6 (ENSCJAG00000004349)	VGLL2 (ENSCJAG00000004345)	ROS1 (ENSCJAG00000004286)	ENSCJAG00000070188	ENSCJAG00000004257	GOPC (ENSCJAG00000004242)	ENSCJAG00000033961
Mas night monkey	MODERN SPECIES	1107			ENSANAG00000018810	MARCKS (ENSANAG00000023603)	ENSANAG00000004036	HDAC2 (ENSANAG00000034693)	ENSANAG00000018971	HS3ST5 (ENSANAG00000026473)	FRK (ENSANAG00000035872)	COL10A1 (ENSANAG00000028479)	ENSANAG00000031391	TSPYL1 (ENSANAG00000022346)	ENSANAG00000036796	DSE (ENSANAG00000038310)	CALHM6 (ENSANAG00000032722) ##20	CALHM5 (ENSANAG00000001421) ##20	ENSANAG00000030183	TRAPPC3L (ENSANAG00000026394)	CALHM4 (ENSANAG00000022923) ##20	RWDD1 (ENSANAG00000030086)	RSPH4A (ENSANAG00000020519)	ZUP1 (ENSANAG00000021756)	KPNA5 (ENSANAG00000009920)	FAM162B (ENSANAG00000023673)	GPRC6A (ENSANAG00000028734)	ENSANAG00000020549	RFX6 (ENSANAG00000035610)	VGLL2 (ENSANAG00000033765)	ROS1 (ENSANAG00000029743)	DCBLD1 (ENSANAG00000036214)	GOPC (ENSANAG00000032043)
Tarsier	MODERN SPECIES	3809										FRK (ENSTSYG00000006421)	ENSTSYG00000012714	COL10A1 (ENSTSYG00000035031)	DSE (ENSTSYG00000009566)	FAM26F (ENSTSYG00000036009) ##20	TRAPPC3L (ENSTSYG00000006716)	FAM26E (ENSTSYG00000006740) ##20	FAM26D (ENSTSYG00000006743) ##20	RWDD1 (ENSTSYG00000008636)
Atlantogenata	ANCESTRAL SPECIES	3	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00730000111419	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Afrotheria	ANCESTRAL SPECIES	13	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Afrotheria_a	ANCESTRAL SPECIES	13	ENSGT00940000161944	ENSGT00940000155462	ENSGT00940000160119	ENSGT00940000155723	ENSGT00390000017996.b	ENSGT00940000159970	ENSGT00940000163194	ENSGT00940000155725	ENSGT00940000158991	ENSGT00940000156987	ENSGT00940000154317.a.b	ENSGT00940000162991	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT00390000003880.b.b	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00940000156772	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Elephant	MODERN SPECIES	1	CCN6 (ENSLAFG00000004071)	TUBE1 (ENSLAFG00000004073)	FAM229B (ENSLAFG00000030627)	LAMA4 (ENSLAFG00000004076)	ENSLAFG00000029012	RFPL4B (ENSLAFG00000021578)	HDAC2 (ENSLAFG00000005566)	HS3ST5 (ENSLAFG00000010686)	FRK (ENSLAFG00000005589)	COL10A1 (ENSLAFG00000022123)	TSPYL4 (ENSLAFG00000010254)	ENSLAFG00000027418	DSE (ENSLAFG00000009134)	ENSLAFG00000012702 ##20	ENSLAFG00000017416 ##20	CALHM5 (ENSLAFG00000008490) ##20	TRAPPC3L (ENSLAFG00000008487)	CALHM4 (ENSLAFG00000027569) ##20	ENSLAFG00000008170	ENSLAFG00000026707	ENSLAFG00000028750	RSPH4A (ENSLAFG00000003514)	ZUP1 (ENSLAFG00000017345)	KPNA5 (ENSLAFG00000003824)	FAM162B (ENSLAFG00000003827)	GPRC6A (ENSLAFG00000003462)	RFX6 (ENSLAFG00000003465)	VGLL2 (ENSLAFG00000009803)	ROS1 (ENSLAFG00000009804)	DCBLD1 (ENSLAFG00000009399)	GOPC (ENSLAFG00000007801)
Hyrax	MODERN SPECIES	6666														ENSPCAG00000004858 ##20	TRAPPC3L (ENSPCAG00000004945)	CALHM5 (ENSPCAG00000004982) ##20	CALHM4 (ENSPCAG00000005003) ##20	RWDD1 (ENSPCAG00000005016)
Tenrec	MODERN SPECIES	1360													DSE (ENSETEG00000019078)	CALHM6 (ENSETEG00000019081) ##20	TRAPPC3L (ENSETEG00000019083)	CALHM5 (ENSETEG00000019084) ##20	RWDD1 (ENSETEG00000019085)
Xenarthra	ANCESTRAL SPECIES	168												ENSGT00940000162991	ENSGT00940000162821	ENSGT00390000006522.b	ENSGT01030000234610.a.a ##20	ENSGT01030000234610.a.b ##20	ENSGT01030000234610.b.b ##20	ENSGT00390000009168	ENSGT00500000044869.a.a	ENSGT00390000008232	ENSGT01050000244950.a.a.b	ENSGT00640000091497.b	ENSGT00940000158416	ENSGT01050000244879.b.a.b.b	ENSGT00530000063353.a.b.a	ENSGT00940000160831	ENSGT00940000157334	ENSGT00940000156535	ENSGT00940000162914	ENSGT00390000003223
Armadillo	MODERN SPECIES	2810					ENSDNOG00000047872	VWC2 (ENSDNOG00000024647)	ENSDNOG00000049577	FRK (ENSDNOG00000010080)	ENSDNOG00000007860	ENSDNOG00000030677	TSPYL4 (ENSDNOG00000042279)	ENSDNOG00000039632	ENSDNOG00000046391	DSE (ENSDNOG00000045714)	ENSDNOG00000045345 ##20	CALHM5 (ENSDNOG00000036788) ##20	CALHM4 (ENSDNOG00000007514) ##20	ENSDNOG00000007516	ENSDNOG00000044348	ENSDNOG00000039401	ENSDNOG00000038517	ENSDNOG00000025447	RSPH4A (ENSDNOG00000001347)	ZUP1 (ENSDNOG00000044598)	KPNA5 (ENSDNOG00000005326)	FAM162B (ENSDNOG00000038676)	GPRC6A (ENSDNOG00000019148)	RFX6 (ENSDNOG00000019162)	VGLL2 (ENSDNOG00000044127)	ROS1 (ENSDNOG00000010519)	DCBLD1 (ENSDNOG00000012574)
Platypus	DUPLICATION
Platypus	MODERN SPECIES	11	FHL2 (ENSOANG00000014839)	NCK2 (ENSOANG00000014187)	ECRG4 (ENSOANG00000044766)	UXS1 (ENSOANG00000029305)	ENSOANG00000051170	ST6GAL2 (ENSOANG00000011147)	SLC5A7 (ENSOANG00000050883)	MALL (ENSOANG00000013121)	HDAC2 (ENSOANG00000003631)	HS3ST5 (ENSOANG00000010980)	FRK (ENSOANG00000029704)	COL10A1 (ENSOANG00000044747)	NT5DC1 (ENSOANG00000040723)	DSE (ENSOANG00000050170)	ENSOANG00000045905 ##20	CALHM5 (ENSOANG00000006298) ##20	TRAPPC3L (ENSOANG00000006297)	ENSOANG00000038481 ##20	RWDD1 (ENSOANG00000045892)	ENSOANG00000020699	ENSOANG00000012469	RSPH4A (ENSOANG00000012472)	ZUP1 (ENSOANG00000013491)	KPNA5 (ENSOANG00000038435)	RFX6 (ENSOANG00000004002)	VGLL2 (ENSOANG00000044125)	ROS1 (ENSOANG00000012474)	DCBLD1 (ENSOANG00000043449)	GOPC (ENSOANG00000003691)	ENSOANG00000003967	NUS1 (ENSOANG00000048113)
Platypus	MODERN SPECIES	11	C2orf49 (ENSOANG00000014840)	FHL2 (ENSOANG00000014839)	NCK2 (ENSOANG00000014187)	ECRG4 (ENSOANG00000044766)	UXS1 (ENSOANG00000029305)	ENSOANG00000051170	ST6GAL2 (ENSOANG00000011147)	SLC5A7 (ENSOANG00000050883)	MALL (ENSOANG00000013121)	HDAC2 (ENSOANG00000003631)	HS3ST5 (ENSOANG00000010980)	FRK (ENSOANG00000029704)	COL10A1 (ENSOANG00000044747)	NT5DC1 (ENSOANG00000040723)	DSE (ENSOANG00000050170)	ENSOANG00000045905 ##20	CALHM5 (ENSOANG00000006298) ##20	TRAPPC3L (ENSOANG00000006297)	ENSOANG00000038481 ##20	RWDD1 (ENSOANG00000045892)	ENSOANG00000020699	ENSOANG00000012469	RSPH4A (ENSOANG00000012472)	ZUP1 (ENSOANG00000013491)	KPNA5 (ENSOANG00000038435)	RFX6 (ENSOANG00000004002)	VGLL2 (ENSOANG00000044125)	ROS1 (ENSOANG00000012474)	DCBLD1 (ENSOANG00000043449)	GOPC (ENSOANG00000003691)	ENSOANG00000003967
Cyclostomata	ANCESTRAL SPECIES																	ENSGT01030000234610.a ##20
Hagfish	MODERN SPECIES	1144																ENSEBUG00000010943 ##20	ENSEBUG00000014817	ENSEBUG00000015882	ENSEBUG00000009788	ENSEBUG00000002937	mat2ab (ENSEBUG00000003353)	ENSEBUG00000002313	ENSEBUG00000004296	ENSEBUG00000010133	WTAP (ENSEBUG00000000698)	ENSEBUG00000006532	ENSEBUG00000003804	ENSEBUG00000003686