Murinae	ANCESTRAL SPECIES	4	ENSGT00940000156185 #7	ENSGT00940000156575 #8	ENSGT00940000155968 #9	ENSGT00390000011296 #10	ENSGT00940000158488 #11	ENSGT00940000156522 #12	ENSGT00930000150969.A.c.b.a #13	ENSGT00930000150969.A.c.a #14	ENSGT00930000150969.A.c.b.b #15	ENSGT00940000156279 #16	ENSGT00950000183015.A #17	ENSGT00940000164891 #18	ENSGT00390000010591 #19	ENSGT00390000008330 #20	ENSGT00950000183014.f.b.a.b #21	ENSGT00530000064244.a #22	ENSGT00940000161980 #23	ENSGT00390000014109 #25	ENSGT00950000183041.A.e #26	ENSGT00390000016313.a.b #27	ENSGT00390000018439 #28	ENSGT00730000111536 #29	ENSGT00940000155864.a.b.s #30	ENSGT00390000009630 #31	ENSGT00940000156315 #32	ENSGT00900000143259	ENSGT00940000162567 #33	ENSGT00940000158170 #34	ENSGT00940000153556.A #35	ENSGT00390000003721.d.a #36	ENSGT00940000156836 #37
Mus	ANCESTRAL SPECIES	12	ENSGT00940000156575 #8	ENSGT00940000155968 #9	ENSGT00390000011296 #10	ENSGT00940000158488 #11	ENSGT00860000135644	ENSGT00940000156522 #12	ENSGT00930000150969.A.c.b.a #13	ENSGT00930000150969.A.c.a #14	ENSGT00930000150969.A.c.b.b #15	ENSGT00940000156279 #16	ENSGT00950000183015.A #17	ENSGT00940000164891 #18	ENSGT00390000010591 #19	ENSGT00390000008330 #20	ENSGT00950000183014.f.b.a.b #21	ENSGT00530000064244.a #22	ENSGT00860000135618	ENSGT00940000161980 #23	ENSGT00390000014109 #25	ENSGT00950000183041.A.e #26	ENSGT00390000016313.a.b #27	ENSGT00390000018439 #28	ENSGT00730000111536 #29	ENSGT00940000155864.a.b.s #30	ENSGT00390000009630 #31	ENSGT00940000156315 #32	ENSGT00900000143259	ENSGT00940000162567 #33	ENSGT00940000158170 #34	ENSGT00940000153556.A #35	ENSGT00390000003721.d.a #36
Mus_A	ANCESTRAL SPECIES	7	ENSGT00940000156575 #8	ENSGT00940000155968 #9	ENSGT00390000011296 #10	ENSGT00940000158488 #11	ENSGT00860000135644	ENSGT00940000156522 #12	ENSGT00930000150969.A.c.b.a #13	ENSGT00930000150969.A.c.a #14	ENSGT00930000150969.A.c.b.b #15	ENSGT00940000156279 #16	ENSGT00950000183015.A #17	ENSGT00940000164891 #18	ENSGT00390000010591 #19	ENSGT00390000008330 #20	ENSGT00950000183014.f.b.a.b #21	ENSGT00530000064244.a #22	ENSGT00860000135618	ENSGT00940000161980 #23	ENSGT00390000014109 #25	ENSGT00950000183041.A.e #26	ENSGT00390000016313.a.b #27	ENSGT00390000018439 #28	ENSGT00730000111536 #29	ENSGT00940000155864.a.b.s #30	ENSGT00390000009630 #31	ENSGT00940000156315 #32	ENSGT00900000143259	ENSGT00940000162567 #33	ENSGT00940000158170 #34	ENSGT00940000153556.A.g.a #35	ENSGT00390000003721.d.a #36
Mus_B	ANCESTRAL SPECIES	15	ENSGT00940000156575 #8	ENSGT00940000155968 #9	ENSGT00390000011296.s #10	ENSGT00940000158488 #11	ENSGT00860000135644	ENSGT00940000156522 #12	ENSGT00930000150969.A.c.b.a #13	ENSGT00930000150969.A.c.a #14	ENSGT00930000150969.A.c.b.b #15	ENSGT00940000156279 #16	ENSGT00950000183015.A #17	ENSGT00940000164891 #18	ENSGT00390000010591 #19	ENSGT00390000008330 #20	ENSGT00950000183014.f.b.a.b #21	ENSGT00530000064244.a #22	ENSGT00860000135618	ENSGT00940000161980 #23	ENSGT00390000014109 #25	ENSGT00950000183041.A.e #26	ENSGT00390000016313.a.b #27	ENSGT00390000018439 #28	ENSGT00730000111536 #29	ENSGT00940000155864.a.b.s #30	ENSGT00390000009630 #31	ENSGT00940000156315 #32	ENSGT00900000143259	ENSGT00940000162567 #33	ENSGT00940000158170 #34	ENSGT00940000153556.A.g.a #35	ENSGT00390000003721.d.a #36
Mouse	MODERN SPECIES	15	Gmcl1 (ENSMUSG00000001157) #7	Anxa4 (ENSMUSG00000029994) #8	Aak1 (ENSMUSG00000057230) #9	Nfu1 (ENSMUSG00000029993) #10	Gfpt1 (ENSMUSG00000029992) #11	Antxr1 (ENSMUSG00000033420) #12	Gkn1 (ENSMUSG00000030050) #13	Gkn2 (ENSMUSG00000030049) #14	Gkn3 (ENSMUSG00000030048) #15	Bmp10 (ENSMUSG00000030046) #16	Arhgap25 (ENSMUSG00000030047) #17	Prokr1 (ENSMUSG00000049409) #18	Aplf (ENSMUSG00000030051) #19	Cfap92 (ENSMUSG00000089997) #20	Efcc1 (ENSMUSG00000068263) #21	Gp9 (ENSMUSG00000030054) #22	Rab43 (ENSMUSG00000030055) #23	Gm45140 (ENSMUSG00000107928) #24	Isy1 (ENSMUSG00000030056) #25	Cnbp (ENSMUSG00000030057) #26	Copg1 (ENSMUSG00000030058) #27	Hmces (ENSMUSG00000030060) #28	H1f10 (ENSMUSG00000044927) #29	Rab7 (ENSMUSG00000079477) #30	Rpn1 (ENSMUSG00000030062) #31	Gata2 (ENSMUSG00000015053) #32	Dnajb8 (ENSMUSG00000048206) #33	Eefsec (ENSMUSG00000033216) #34	Ruvbl1 (ENSMUSG00000030079) #35	Sec61a1 (ENSMUSG00000030082) #36	Kbtbd12 (ENSMUSG00000033182) #37
Mus_C	ANCESTRAL SPECIES	18	ENSGT00940000156575 #8	ENSGT00940000155968 #9	ENSGT00390000011296.s #10	ENSGT00940000158488 #11	ENSGT00860000135644	ENSGT00940000156522 #12	ENSGT00930000150969.A.c.b.a #13	ENSGT00930000150969.A.c.a #14	ENSGT00930000150969.A.c.b.b #15	ENSGT00940000156279 #16	ENSGT00950000183015.A #17	ENSGT00940000164891 #18	ENSGT00390000010591 #19	ENSGT00390000008330 #20	ENSGT00950000183014.f.b.a.b #21	ENSGT00530000064244.a #22	ENSGT00860000135618	ENSGT00940000161980 #23	ENSGT00390000014109 #25	ENSGT00950000183041.A.e #26	ENSGT00390000016313.a.b #27	ENSGT00390000018439 #28	ENSGT00730000111536 #29	ENSGT00940000155864.a.b.s #30	ENSGT00390000009630 #31	ENSGT00940000156315 #32	ENSGT00900000143259	ENSGT00940000162567 #33	ENSGT00940000158170 #34	ENSGT00940000153556.A.g.a #35	ENSGT00390000003721.d.a #36
spretus	MODERN SPECIES	15	Gmcl1 (MGP_SPRETEiJ_G0029613) #7	Anxa4 (MGP_SPRETEiJ_G0029614) #8	Aak1 (MGP_SPRETEiJ_G0029615) #9	Nfu1 (MGP_SPRETEiJ_G0029616) #10	Gfpt1 (MGP_SPRETEiJ_G0029617) #11	MGP_SPRETEiJ_G0029618	Antxr1 (MGP_SPRETEiJ_G0029619) #12	Gkn1 (MGP_SPRETEiJ_G0029620) #13	Gkn2 (MGP_SPRETEiJ_G0029621) #14	Gkn3 (MGP_SPRETEiJ_G0029622) #15	Bmp10 (MGP_SPRETEiJ_G0029623) #16	Arhgap25 (MGP_SPRETEiJ_G0029624) #17	Prokr1 (MGP_SPRETEiJ_G0029625) #18	Aplf (MGP_SPRETEiJ_G0029626) #19	Efcc1 (MGP_SPRETEiJ_G0029627) #21	Gp9 (MGP_SPRETEiJ_G0029628) #22	Rab43 (MGP_SPRETEiJ_G0029629) #23	MGP_SPRETEiJ_G0029630	Isy1 (MGP_SPRETEiJ_G0029631) #25	Cnbp (MGP_SPRETEiJ_G0029632) #26	Copg1 (MGP_SPRETEiJ_G0029633) #27	Hmces (MGP_SPRETEiJ_G0029634) #28	MGP_SPRETEiJ_G0029635 #29	Rab7 (MGP_SPRETEiJ_G0029636) #30	Rpn1 (MGP_SPRETEiJ_G0029637) #31	Gata2 (MGP_SPRETEiJ_G0029638) #32	Dnajb8 (MGP_SPRETEiJ_G0029639) #33	Eefsec (MGP_SPRETEiJ_G0029640) #34	Ruvbl1 (MGP_SPRETEiJ_G0029641) #35	Sec61a1 (MGP_SPRETEiJ_G0029642) #36	Kbtbd12 (MGP_SPRETEiJ_G0029643) #37
Steppe mouse	MODERN SPECIES	3245	Anxa4 (ENSMSIG00000014770) #8	Aak1 (ENSMSIG00000014567) #9	Nfu1 (ENSMSIG00000014498) #10	Gfpt1 (ENSMSIG00000014430) #11	Antxr1 (ENSMSIG00000014330) #12	Gkn1 (ENSMSIG00000014321) #13	Gkn2 (ENSMSIG00000014305) #14	Gkn3 (ENSMSIG00000014288) #15	Bmp10 (ENSMSIG00000014277) #16	Arhgap25 (ENSMSIG00000014180) #17	Prokr1 (ENSMSIG00000014170) #18	Aplf (ENSMSIG00000014118) #19	ENSMSIG00000014100	Cfap92 (ENSMSIG00000014040) #20	Efcc1 (ENSMSIG00000013979) #21	Gp9 (ENSMSIG00000013971) #22	Rab43 (ENSMSIG00000013941) #23	Isy1 (ENSMSIG00000013902) #25	Cnbp (ENSMSIG00000013887) #26	Copg1 (ENSMSIG00000013836) #27	Hmces (ENSMSIG00000013812) #28	Rab7 (ENSMSIG00000013617) #30	Rpn1 (ENSMSIG00000013555) #31	Gata2 (ENSMSIG00000013519) #32	ENSMSIG00000013506	Dnajb8 (ENSMSIG00000013500) #33	Eefsec (ENSMSIG00000013446) #34	Ruvbl1 (ENSMSIG00000013395) #35	Sec61a1 (ENSMSIG00000013368) #36	Kbtbd12 (ENSMSIG00000013327) #37	Mgll (ENSMSIG00000013258)
Shrew mouse	MODERN SPECIES	11	Gmcl1 (MGP_PahariEiJ_G0022339) #7	Anxa4 (MGP_PahariEiJ_G0022340) #8	Aak1 (MGP_PahariEiJ_G0022341) #9	Nfu1 (MGP_PahariEiJ_G0022342) #10	Gfpt1 (MGP_PahariEiJ_G0022343) #11	MGP_PahariEiJ_G0022344	MGP_PahariEiJ_G0022345 #12	Gkn1 (MGP_PahariEiJ_G0022346) #13	Gkn2 (MGP_PahariEiJ_G0022347) #14	Gkn3 (MGP_PahariEiJ_G0022348) #15	Bmp10 (MGP_PahariEiJ_G0022349) #16	Arhgap25 (MGP_PahariEiJ_G0022350) #17	Prokr1 (MGP_PahariEiJ_G0022351) #18	Aplf (MGP_PahariEiJ_G0022352) #19	Efcc1 (MGP_PahariEiJ_G0022353) #21	Gp9 (MGP_PahariEiJ_G0022354) #22	Rab43 (MGP_PahariEiJ_G0022355) #23	MGP_PahariEiJ_G0022356	Isy1 (MGP_PahariEiJ_G0022357) #25	Cnbp (MGP_PahariEiJ_G0022358) #26	Copg1 (MGP_PahariEiJ_G0022359) #27	Hmces (MGP_PahariEiJ_G0022360) #28	MGP_PahariEiJ_G0022361 #29	Rab7 (MGP_PahariEiJ_G0022362) #30	Rpn1 (MGP_PahariEiJ_G0022363) #31	Gata2 (MGP_PahariEiJ_G0022364) #32	Dnajb8 (MGP_PahariEiJ_G0022365) #33	Eefsec (MGP_PahariEiJ_G0022366) #34	Ruvbl1 (MGP_PahariEiJ_G0022367) #35	Sec61a1 (MGP_PahariEiJ_G0022368) #36	Kbtbd12 (MGP_PahariEiJ_G0022369) #37
Rat	MODERN SPECIES	14	Anxa4 (ENSRNOG00000018159) #8	Aak1 (ENSRNOG00000018317) #9	Rpl22 (ENSRNOG00000028747)	Nfu1 (ENSRNOG00000018410) #10	Gfpt1 (ENSRNOG00000018507) #11	Antxr1 (ENSRNOG00000008678) #12	Gkn1 (ENSRNOG00000008838) #13	Gkn2 (ENSRNOG00000009256) #14	Gkn3 (ENSRNOG00000037782) #15	Bmp10 (ENSRNOG00000009316) #16	Arhgap25 (ENSRNOG00000009347) #17	Prokr1 (ENSRNOG00000009556) #18	Aplf (ENSRNOG00000043059) #19	Cfap92 (ENSRNOG00000031408) #20	Efcc1 (ENSRNOG00000009787) #21	Gp9 (ENSRNOG00000010015) #22	Rab43 (ENSRNOG00000037768) #23	Isy1 (ENSRNOG00000010021) #25	Cnbp (ENSRNOG00000010239) #26	Hmces (ENSRNOG00000010474) #27	H1f10 (ENSRNOG00000027722) #29	Rab7a (ENSRNOG00000012247) #30	Rpn1 (ENSRNOG00000046345) #31	ENSRNOG00000070501	Gata2 (ENSRNOG00000012347) #32	Dnajb8 (ENSRNOG00000034088) #33	Eefsec (ENSRNOG00000012954) #34	Ruvbl1 (ENSRNOG00000013195) #35	LOC685085 (ENSRNOG00000062325)	Sec61a1 (ENSRNOG00000013743) #36	Kbtbd12 (ENSRNOG00000061868) #37