Tetrapoda	ANCESTRAL SPECIES	6	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Amniota	ANCESTRAL SPECIES	6	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01000000220430	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862
Mammalia	ANCESTRAL SPECIES	6	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01000000220430	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862
Theria	ANCESTRAL SPECIES	5	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Eutheria	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Boreoeutheria	ANCESTRAL SPECIES	14	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Euarchontoglires	ANCESTRAL SPECIES	14	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Euarchontoglires_A	ANCESTRAL SPECIES	13	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Glires	ANCESTRAL SPECIES	14	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Rodentia	ANCESTRAL SPECIES	14	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Rodentia_A	ANCESTRAL SPECIES	13	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Sciuridae	ANCESTRAL SPECIES	10	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.fb.a ##10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00490000043329.a.a.a.k.a #17	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526.c.b #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Marmotini	ANCESTRAL SPECIES	2	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.fb.a ##10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00490000043329.a.a.a.k.a #17	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526.c.b #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Alpin marmot	MODERN SPECIES	5	ENSMMMG00000022120 #7	STAM2 (ENSMMMG00000022104) #8	CACNB4 (ENSMMMG00000022074) #9	ENSMMMG00000022061 #10	NEB (ENSMMMG00000021921) #11	RIF1 (ENSMMMG00000021851) #12	TNFAIP6 (ENSMMMG00000021834) #13	ENSMMMG00000021827 #14	NMI (ENSMMMG00000021825) #15	RBM43 (ENSMMMG00000021824) #16	ENSMMMG00000021801 #17	ENSMMMG00000021776 #18	ENSMMMG00000021771 #19	ENSMMMG00000021752 #20	RND3 (ENSMMMG00000021746) #21	MMADHC (ENSMMMG00000021733) #22	LYPD6 (ENSMMMG00000021723) #23	LYPD6B (ENSMMMG00000021702) #24	KIF5C (ENSMMMG00000021654) #25	ENSMMMG00000021646 #26	EPC2 (ENSMMMG00000021637) #27	ENSMMMG00000021627 #28	ENSMMMG00000021626 #29	ENSMMMG00000021615 #30	ENSMMMG00000021598 #31	ACVR2A (ENSMMMG00000021587) #32	ZEB2 (ENSMMMG00000021492) #33	GTDC1 (ENSMMMG00000021476) #34	ENSMMMG00000021461 #35	ARHGAP15 (ENSMMMG00000021442) #36	KYNU (ENSMMMG00000021410) #37
Marmotini_b	ANCESTRAL SPECIES	10	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.fb.a ##10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00490000043329.a.a.a.k.a #17	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526.c.b #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Squirrel	MODERN SPECIES	69	GALNT13 (ENSSTOG00000011628)	RPRM (ENSSTOG00000026311)	ARL6IP6 (ENSSTOG00000001658)	PRPF40A (ENSSTOG00000001642)	FMNL2 (ENSSTOG00000001614)	STAM2 (ENSSTOG00000025023) #8	CACNB4 (ENSSTOG00000016328) #9	ARL5A (ENSSTOG00000016326) ##10	NEB (ENSSTOG00000016315) #11	RIF1 (ENSSTOG00000020712) #12	TNFAIP6 (ENSSTOG00000016314) #13	NMI (ENSSTOG00000028659) #15	RBM43 (ENSSTOG00000016311) #16	ENSSTOG00000021862 #17	RND3 (ENSSTOG00000009798) #21	MMADHC (ENSSTOG00000021576) #22	LYPD6 (ENSSTOG00000029572) #23	LYPD6B (ENSSTOG00000021300) #24	KIF5C (ENSSTOG00000008408) #25	EPC2 (ENSSTOG00000010468) #27	MBD5 (ENSSTOG00000024028) #29	ORC4 (ENSSTOG00000026092) #30	ACVR2A (ENSSTOG00000025105) #32	ENSSTOG00000032731	ZEB2 (ENSSTOG00000003811) #33	GTDC1 (ENSSTOG00000016373) #34	ARHGAP15 (ENSSTOG00000009312) #36	KYNU (ENSSTOG00000009286) #37	LRP1B (ENSSTOG00000002686)	ENSSTOG00000031059	NXPH2 (ENSSTOG00000001587)
Arctic ground squirrel	MODERN SPECIES	3	ARL6IP6 (ENSUPAG00010000239)	PRPF40A (ENSUPAG00010000254)	FMNL2 (ENSUPAG00010000658)	STAM2 (ENSUPAG00010001468) #8	ENSUPAG00010001568 #7	CACNB4 (ENSUPAG00010001584) #9	ENSUPAG00010001737 ##10	NEB (ENSUPAG00010001764) #11	RIF1 (ENSUPAG00010002377) #12	TNFAIP6 (ENSUPAG00010004346) #13	NMI (ENSUPAG00010004358) #15	RBM43 (ENSUPAG00010004382) #16	ENSUPAG00010004388	ENSUPAG00010004396 #17	RND3 (ENSUPAG00010004413) #21	MMADHC (ENSUPAG00010004432) #22	LYPD6 (ENSUPAG00010004464) #23	LYPD6B (ENSUPAG00010004479) #24	KIF5C (ENSUPAG00010004496) #25	EPC2 (ENSUPAG00010004529) #27	ENSUPAG00010004532 #26	ENSUPAG00010004533	MBD5 (ENSUPAG00010004537) #29	ORC4 (ENSUPAG00010004557) #30	ACVR2A (ENSUPAG00010004582) #32	ENSUPAG00010004608 #31	ZEB2 (ENSUPAG00010004644) #33	GTDC1 (ENSUPAG00010004826) #34	ARHGAP15 (ENSUPAG00010004846) #36	KYNU (ENSUPAG00010004892) #37	LRP1B (ENSUPAG00010004938)
Eurasian red squirrel	MODERN SPECIES	12	FMNL2 (ENSSVLG00005007277)	STAM2 (ENSSVLG00005007197) #8	ENSSVLG00005007179	CACNB4 (ENSSVLG00005005336) #9	ENSSVLG00005004741 ##10	ENSSVLG00005004729	NEB (ENSSVLG00005004118) #11	RIF1 (ENSSVLG00005003716) #12	TNFAIP6 (ENSSVLG00005003640) #13	ENSSVLG00005003622	ENSSVLG00005003611 #15	RBM43 (ENSSVLG00005003593) #16	ENSSVLG00005003570 #17	RND3 (ENSSVLG00005003560) #21	ENSSVLG00005003548	MMADHC (ENSSVLG00005003507) #22	LYPD6 (ENSSVLG00005003472) #23	LYPD6B (ENSSVLG00005003456) #24	KIF5C (ENSSVLG00005003411) #25	EPC2 (ENSSVLG00005003372) #27	MBD5 (ENSSVLG00005003333) #29	ORC4 (ENSSVLG00005003298) #30	ACVR2A (ENSSVLG00005003270) #32	ENSSVLG00005003233	ENSSVLG00005003222	ENSSVLG00005003208	ENSSVLG00005003174 #33	GTDC1 (ENSSVLG00005003107) #34	ARHGAP15 (ENSSVLG00005003035) #36	KYNU (ENSSVLG00005002948) #37	ENSSVLG00005002904
Hystricomorpha	ANCESTRAL SPECIES	20	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Hystricomorpha_a	ANCESTRAL SPECIES	17	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Hystricomorpha_b	ANCESTRAL SPECIES	67	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Degu	DUPLICATION
Degu	MODERN SPECIES	123	ENSODEG00000004433	STAM2 (ENSODEG00000004336) #8	ENSODEG00000019186	ENSODEG00000004294	CACNB4 (ENSODEG00000003835) #9	ENSODEG00000003628 #10	ENSODEG00000003755	NEB (ENSODEG00000004729) #11	RIF1 (ENSODEG00000003950) #12	TNFAIP6 (ENSODEG00000003733) #13	NMI (ENSODEG00000003668) #15	RBM43 (ENSODEG00000003642) #16	ENSODEG00000018963	RND3 (ENSODEG00000003549) #21	ENSODEG00000003457	ENSODEG00000003416 #22	LYPD6 (ENSODEG00000003357) #23	LYPD6B (ENSODEG00000003306) #24	ENSODEG00000018967	KIF5C (ENSODEG00000003161) #25	EPC2 (ENSODEG00000003123) #27	ENSODEG00000003098	ENSODEG00000003076 #29	ENSODEG00000018860	ENSODEG00000002909	ENSODEG00000002882	ORC4 (ENSODEG00000007273) #30	ACVR2A (ENSODEG00000007139) #32	ZEB2 (ENSODEG00000006916) #33	ENSODEG00000006826	ENSODEG00000006741 #34
Degu	MODERN SPECIES	58																ENSODEG00000014810 #22	ENSODEG00000016922	EPHX1 (ENSODEG00000014812)	ENSODEG00000015075	ENAH (ENSODEG00000014853)	ENSODEG00000015198	CNIH3 (ENSODEG00000015526)	WDR26 (ENSODEG00000014639)	CNIH4 (ENSODEG00000014547)	NVL (ENSODEG00000015119)	DEGS1 (ENSODEG00000014645)	ENSODEG00000015588	ENSODEG00000015647	TP53BP2 (ENSODEG00000014627)	CAPN2 (ENSODEG00000014888)	ENSODEG00000015314
Long-tailed chinchilla	MODERN SPECIES	147		KCNJ3 (ENSCLAG00000004537)	GALNT13 (ENSCLAG00000004217)	PRPF40A (ENSCLAG00000001774)	FMNL2 (ENSCLAG00000001515)	STAM2 (ENSCLAG00000001380) #8	CACNB4 (ENSCLAG00000005759) #9	ENSCLAG00000005398 #10	NEB (ENSCLAG00000002157) #11	RIF1 (ENSCLAG00000001517) #12	TNFAIP6 (ENSCLAG00000002857) #13	NMI (ENSCLAG00000002759) #15	RBM43 (ENSCLAG00000002635) #16	ENSCLAG00000002555 #21	ENSCLAG00000002537	MMADHC (ENSCLAG00000002129) #22	LYPD6 (ENSCLAG00000001952) #23	LYPD6B (ENSCLAG00000002017) #24	KIF5C (ENSCLAG00000001868) #25	EPC2 (ENSCLAG00000001768) #27	MBD5 (ENSCLAG00000001690) #29	ORC4 (ENSCLAG00000002811) #30	ACVR2A (ENSCLAG00000002708) #32	ZEB2 (ENSCLAG00000002230) #33	GTDC1 (ENSCLAG00000007819) #34	ARHGAP15 (ENSCLAG00000006756) #36	KYNU (ENSCLAG00000005935) #37	LRP1B (ENSCLAG00000002036)	NXPH2 (ENSCLAG00000017455)	SPOPL (ENSCLAG00000001710)	HNMT (ENSCLAG00000001523)
Guinea pig	MODERN SPECIES	3	GALNT13 (ENSCPOG00000013115)	RPRM (ENSCPOG00000005597)	PRPF40A (ENSCPOG00000013494)	FMNL2 (ENSCPOG00000013482)	STAM2 (ENSCPOG00000002847) #8	CACNB4 (ENSCPOG00000026052) #9	ARL5A (ENSCPOG00000005209) #10	NEB (ENSCPOG00000005161) #11	RIF1 (ENSCPOG00000037898) #12	ENSCPOG00000038795	TNFAIP6 (ENSCPOG00000007974) #13	NMI (ENSCPOG00000013053) #15	RBM43 (ENSCPOG00000037758) #16	ENSCPOG00000033292	RND3 (ENSCPOG00000035751) #21	MMADHC (ENSCPOG00000007690) #22	LYPD6 (ENSCPOG00000007686) #23	LYPD6B (ENSCPOG00000034526) #24	KIF5C (ENSCPOG00000026278) #25	EPC2 (ENSCPOG00000008502) #27	MBD5 (ENSCPOG00000006236) #29	ORC4 (ENSCPOG00000008580) #30	ACVR2A (ENSCPOG00000008575) #32	ZEB2 (ENSCPOG00000004182) #33	ENSCPOG00000035797	GTDC1 (ENSCPOG00000007030) #34	ARHGAP15 (ENSCPOG00000007467) #36	KYNU (ENSCPOG00000011220) #37	ENSCPOG00000021859	ENSCPOG00000038865	LRP1B (ENSCPOG00000014122)
Naked mole-rat female	MODERN SPECIES	22	ENSHGLG00000037482	ENSHGLG00000050584	ENSHGLG00000013230	ENSHGLG00000012563	NCKAP1 (ENSHGLG00000012280)	FRZB (ENSHGLG00000011729)	ENSHGLG00000009430	ENSHGLG00000001353	NMI (ENSHGLG00000034716) #15	ENSHGLG00000001571 #16	ENSHGLG00000037472	ENSHGLG00000049018	ENSHGLG00000044159 #21	ENSHGLG00000014111	ENSHGLG00000044811	ENSHGLG00000011653 #22	ENSHGLG00000010446 #23	ENSHGLG00000008540	LYPD6B (ENSHGLG00000037498) #24	ENSHGLG00000020241	ENSHGLG00000003241	KIF5C (ENSHGLG00000002894) #25	EPC2 (ENSHGLG00000001526) #27	ENSHGLG00000042407	ENSHGLG00000045749 #20	MBD5 (ENSHGLG00000000588) #29	ENSHGLG00000012065	ENSHGLG00000042968	ORC4 (ENSHGLG00000035874) #30	ACVR2A (ENSHGLG00000046847) #32	ENSHGLG00000036243 #20
Rodentia_B	ANCESTRAL SPECIES	12	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Myomorpha	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Muroidea	ANCESTRAL SPECIES	34	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Muroidea_A	ANCESTRAL SPECIES	2	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Murinae	ANCESTRAL SPECIES	1	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00550000074961	ENSGT00390000009566	ENSGT00940000153772.B
Mus	ANCESTRAL SPECIES	1	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00550000074961	ENSGT00390000009566	ENSGT00940000153772.B
Mus_A	ANCESTRAL SPECIES		ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00550000074961	ENSGT00390000009566	ENSGT00940000153772.B
Mus_B	ANCESTRAL SPECIES	1	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00550000074961	ENSGT00390000009566	ENSGT00940000153772.B
Mus_C	ANCESTRAL SPECIES		ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00390000012037.x	ENSGT00550000074961	ENSGT00390000009566
spretus	MODERN SPECIES	11	Galnt13 (MGP_SPRETEiJ_G0024485)	Rprm (MGP_SPRETEiJ_G0024484)	Arl6ip6 (MGP_SPRETEiJ_G0024483)	Prpf40a (MGP_SPRETEiJ_G0024482)	Fmnl2 (MGP_SPRETEiJ_G0024481)	Stam2 (MGP_SPRETEiJ_G0024480) #8	Cacnb4 (MGP_SPRETEiJ_G0024479) #9	Arl5a (MGP_SPRETEiJ_G0024478) #10	Neb (MGP_SPRETEiJ_G0024477) #11	Rif1 (MGP_SPRETEiJ_G0024476) #12	Tnfaip6 (MGP_SPRETEiJ_G0024475) #13	Nmi (MGP_SPRETEiJ_G0024474) #15	Rbm43 (MGP_SPRETEiJ_G0024473) #16	Tas2r134 (MGP_SPRETEiJ_G0024472)	Rnd3 (MGP_SPRETEiJ_G0024471) #21	Mmadhc (MGP_SPRETEiJ_G0024470) #22	Lypd6 (MGP_SPRETEiJ_G0024469) #23	Lypd6b (MGP_SPRETEiJ_G0024468) #24	Kif5c (MGP_SPRETEiJ_G0024467) #25	Epc2 (MGP_SPRETEiJ_G0024466) #27	MGP_SPRETEiJ_G0024465	Mbd5 (MGP_SPRETEiJ_G0024464) #29	Orc4 (MGP_SPRETEiJ_G0024463) #30	Acvr2a (MGP_SPRETEiJ_G0024462) #32	Zeb2 (MGP_SPRETEiJ_G0024461) #33	Gtdc1 (MGP_SPRETEiJ_G0024460) #34	Arhgap15 (MGP_SPRETEiJ_G0024459) #36	Kynu (MGP_SPRETEiJ_G0024458) #37	Lrp1b (MGP_SPRETEiJ_G0024457)	MGP_SPRETEiJ_G0024456	Ppp6c (MGP_SPRETEiJ_G0024455)
Steppe mouse	MODERN SPECIES	2583															ENSMSIG00000020673	Mmadhc (ENSMSIG00000020649) #22	Lypd6 (ENSMSIG00000020546) #23	Lypd6b (ENSMSIG00000020508) #24
Mouse	MODERN SPECIES	11	Galnt13 (ENSMUSG00000060988)	Rprm (ENSMUSG00000075334)	Arl6ip6 (ENSMUSG00000026960)	Prpf40a (ENSMUSG00000061136)	Fmnl2 (ENSMUSG00000036053)	Stam2 (ENSMUSG00000055371) #8	Cacnb4 (ENSMUSG00000017412) #9	Arl5a (ENSMUSG00000036093) #10	Neb (ENSMUSG00000026950) #11	Rif1 (ENSMUSG00000036202) #12	Tnfaip6 (ENSMUSG00000053475) #13	Nmi (ENSMUSG00000026946) #15	Rbm43 (ENSMUSG00000036249) #16	Tas2r134 (ENSMUSG00000056115)	Rnd3 (ENSMUSG00000017144) #21	Mmadhc (ENSMUSG00000026766) #22	Lypd6 (ENSMUSG00000050447) #23	Lypd6b (ENSMUSG00000026765) #24	Kif5c (ENSMUSG00000026764) #25	Epc2 (ENSMUSG00000069495) #27	Mbd5 (ENSMUSG00000036792) #29	Orc4 (ENSMUSG00000026761) #30	Acvr2a (ENSMUSG00000052155) #32	Zeb2 (ENSMUSG00000026872) #33	Gtdc1 (ENSMUSG00000036890) #34	Arhgap15 (ENSMUSG00000049744) #36	Kynu (ENSMUSG00000026866) #37	Lrp1b (ENSMUSG00000049252)	Ppp6c (ENSMUSG00000026753)	Scai (ENSMUSG00000035236)	Golga1 (ENSMUSG00000026754)
Ryukyu mouse	MODERN SPECIES	11	Galnt13 (MGP_CAROLIEiJ_G0023564)	Rprm (MGP_CAROLIEiJ_G0023563)	Arl6ip6 (MGP_CAROLIEiJ_G0023562)	Prpf40a (MGP_CAROLIEiJ_G0023561)	Fmnl2 (MGP_CAROLIEiJ_G0023560)	Stam2 (MGP_CAROLIEiJ_G0023559) #8	Cacnb4 (MGP_CAROLIEiJ_G0023558) #9	Arl5a (MGP_CAROLIEiJ_G0023557) #10	MGP_CAROLIEiJ_G0023556 #11	Rif1 (MGP_CAROLIEiJ_G0023555) #12	Tnfaip6 (MGP_CAROLIEiJ_G0023554) #13	Nmi (MGP_CAROLIEiJ_G0023553) #15	Rbm43 (MGP_CAROLIEiJ_G0023552) #16	Tas2r134 (MGP_CAROLIEiJ_G0023551)	Rnd3 (MGP_CAROLIEiJ_G0023550) #21	Mmadhc (MGP_CAROLIEiJ_G0023549) #22	Lypd6 (MGP_CAROLIEiJ_G0023548) #23	Lypd6b (MGP_CAROLIEiJ_G0023547) #24	Kif5c (MGP_CAROLIEiJ_G0023546) #25	Epc2 (MGP_CAROLIEiJ_G0023545) #27	Mbd5 (MGP_CAROLIEiJ_G0023544) #29	Orc4 (MGP_CAROLIEiJ_G0023543) #30	Acvr2a (MGP_CAROLIEiJ_G0023542) #32	Zeb2 (MGP_CAROLIEiJ_G0023541) #33	Gtdc1 (MGP_CAROLIEiJ_G0023540) #34	Arhgap15 (MGP_CAROLIEiJ_G0023539) #36	MGP_CAROLIEiJ_G0023538 #37	Lrp1b (MGP_CAROLIEiJ_G0023537)	MGP_CAROLIEiJ_G0023536	Ppp6c (MGP_CAROLIEiJ_G0023535)	Scai (MGP_CAROLIEiJ_G0023534)
Shrew mouse	MODERN SPECIES	16	Galnt13 (MGP_PahariEiJ_G0025015)	Rprm (MGP_PahariEiJ_G0025014)	Arl6ip6 (MGP_PahariEiJ_G0025013)	Prpf40a (MGP_PahariEiJ_G0025012)	Fmnl2 (MGP_PahariEiJ_G0025011)	Stam2 (MGP_PahariEiJ_G0025010) #8	Cacnb4 (MGP_PahariEiJ_G0025009) #9	Arl5a (MGP_PahariEiJ_G0025008) #10	MGP_PahariEiJ_G0025007 #11	Rif1 (MGP_PahariEiJ_G0025006) #12	Tnfaip6 (MGP_PahariEiJ_G0025005) #13	Nmi (MGP_PahariEiJ_G0025004) #15	Rbm43 (MGP_PahariEiJ_G0025003) #16	Tas2r134 (MGP_PahariEiJ_G0025002)	Rnd3 (MGP_PahariEiJ_G0025001) #21	Mmadhc (MGP_PahariEiJ_G0025000) #22	Lypd6 (MGP_PahariEiJ_G0024999) #23	Lypd6b (MGP_PahariEiJ_G0024998) #24	Kif5c (MGP_PahariEiJ_G0024997) #25	Epc2 (MGP_PahariEiJ_G0024996) #27	Mbd5 (MGP_PahariEiJ_G0024995) #29	Orc4 (MGP_PahariEiJ_G0024994) #30	Acvr2a (MGP_PahariEiJ_G0024993) #32	Zeb2 (MGP_PahariEiJ_G0024992) #33	Gtdc1 (MGP_PahariEiJ_G0024991) #34	Arhgap15 (MGP_PahariEiJ_G0024990) #36	Kynu (MGP_PahariEiJ_G0024989) #37	Lrp1b (MGP_PahariEiJ_G0024988)	Ppp6c (MGP_PahariEiJ_G0024987)	Scai (MGP_PahariEiJ_G0024986)	Golga1 (MGP_PahariEiJ_G0024985)
Rat	MODERN SPECIES	13	Fmnl2 (ENSRNOG00000055567)	Dppa5 (ENSRNOG00000029793)	Ndufa2-ps1 (ENSRNOG00000064291)	Stam2 (ENSRNOG00000027447) #8	Cacnb4 (ENSRNOG00000007666) #9	Arl5a (ENSRNOG00000006839) #10	AABR07052125.1 (ENSRNOG00000006829)	Neb (ENSRNOG00000006783) #11	Rif1 (ENSRNOG00000054901) #12	ENSRNOG00000071171	Tnfaip6 (ENSRNOG00000050792) #13	Nmi (ENSRNOG00000027502) #15	Tas2r134 (ENSRNOG00000027510)	Rnd3 (ENSRNOG00000004624) #21	LOC499796 (ENSRNOG00000028112)	Mmadhc (ENSRNOG00000004740) #22	Hnrnpa1-ps20 (ENSRNOG00000005951)	LOC120101547 (ENSRNOG00000048601)	Lypd6 (ENSRNOG00000068044) #23	Ns5atp4-ps3 (ENSRNOG00000027533) #7	Lypd6b (ENSRNOG00000004614) #24	Kif5c (ENSRNOG00000004680) #25	Epc2 (ENSRNOG00000029447) #27	Mbd5 (ENSRNOG00000027596) #29	Orc4 (ENSRNOG00000005021) #30	Acvr2a (ENSRNOG00000005334) #32	ENSRNOG00000062624	ENSRNOG00000067798	Zeb2 (ENSRNOG00000004677) #33	Gtdc1 (ENSRNOG00000031038) #34	Arhgap15 (ENSRNOG00000031168) #36
Cricetidae	ANCESTRAL SPECIES	12	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Cricetidae_B	ANCESTRAL SPECIES	7	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT01100000263477.B.d.a.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Northern American deer mouse	MODERN SPECIES	17	Rprm (ENSPEMG00000014265)	Arl6ip6 (ENSPEMG00000001460)	Prpf40a (ENSPEMG00000020838)	Fmnl2 (ENSPEMG00000021308)	Stam2 (ENSPEMG00000012476) #8	Cacnb4 (ENSPEMG00000000044) #9	ENSPEMG00000010335 #10	Neb (ENSPEMG00000011241) #11	Rif1 (ENSPEMG00000000446) #12	Tnfaip6 (ENSPEMG00000009635) #13	Nmi (ENSPEMG00000013860) #15	Rbm43 (ENSPEMG00000009267) #16	Tas2r134 (ENSPEMG00000026859)	Rnd3 (ENSPEMG00000030018) #21	ENSPEMG00000028309	Mmadhc (ENSPEMG00000015462) #22	Lypd6 (ENSPEMG00000030454) #23	Lypd6b (ENSPEMG00000030753) #24	Kif5c (ENSPEMG00000013456) #25	Epc2 (ENSPEMG00000008844) #27	Mbd5 (ENSPEMG00000012335) #29	Orc4 (ENSPEMG00000013503) #30	Acvr2a (ENSPEMG00000025982) #32	ENSPEMG00000030197	ENSPEMG00000008317	ENSPEMG00000029306	ENSPEMG00000009353	Zeb2 (ENSPEMG00000004029) #33	Gtdc1 (ENSPEMG00000006747) #34	Arhgap15 (ENSPEMG00000008557) #36	Kynu (ENSPEMG00000011128) #37
Prairie vole	MODERN SPECIES	12	Kcnj3 (ENSMOCG00000020988)	Galnt13 (ENSMOCG00000014596)	Rprm (ENSMOCG00000002172)	Arl6ip6 (ENSMOCG00000016947)	Prpf40a (ENSMOCG00000009517)	Fmnl2 (ENSMOCG00000022812)	Stam2 (ENSMOCG00000003177) #8	Cacnb4 (ENSMOCG00000022468) #9	Arl5a (ENSMOCG00000019795) #10	Neb (ENSMOCG00000022729) #11	Rif1 (ENSMOCG00000009381) #12	Tnfaip6 (ENSMOCG00000003915) #13	ENSMOCG00000011562	Rbm43 (ENSMOCG00000007686) #16	Rnd3 (ENSMOCG00000019178) #21	Mmadhc (ENSMOCG00000012955) #22	Lypd6 (ENSMOCG00000006453) #23	Lypd6b (ENSMOCG00000020650) #24	Kif5c (ENSMOCG00000001353) #25	Epc2 (ENSMOCG00000003346) #27	Mbd5 (ENSMOCG00000019347) #29	Orc4 (ENSMOCG00000008587) #30	Acvr2a (ENSMOCG00000001323) #32	ENSMOCG00000007379	Zeb2 (ENSMOCG00000016943) #33	Gtdc1 (ENSMOCG00000022059) #34	Arhgap15 (ENSMOCG00000022212) #36	Kynu (ENSMOCG00000018120) #37	ENSMOCG00000021528	ENSMOCG00000020186	ENSMOCG00000001529
Cricetinae	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Chinese hamster chok1gshd	MODERN SPECIES	188	Rprm (ENSCGRG00001009462)	Arl6ip6 (ENSCGRG00001021408)	Prpf40a (ENSCGRG00001022526)	Fmnl2 (ENSCGRG00001024179)	Stam2 (ENSCGRG00001023878) #8	Cacnb4 (ENSCGRG00001023366) #9	Arl5a (ENSCGRG00001024645) #10	Neb (ENSCGRG00001022624) #11	Rif1 (ENSCGRG00001024589) #12	Tnfaip6 (ENSCGRG00001024845) #13	Nmi (ENSCGRG00001000480) #15	Rbm43 (ENSCGRG00001011129) #16	ENSCGRG00001014515	Tas2r134 (ENSCGRG00001008402)	Rnd3 (ENSCGRG00001018416) #21	Mmadhc (ENSCGRG00001008423) #22	Lypd6 (ENSCGRG00001009801) #23	Lypd6b (ENSCGRG00001008503) #24	Kif5c (ENSCGRG00001021373) #25	Epc2 (ENSCGRG00001024568) #27	Mbd5 (ENSCGRG00001001266) #29	Orc4 (ENSCGRG00001001352) #30	Acvr2a (ENSCGRG00001024754) #32	ENSCGRG00001000890	Zeb2 (ENSCGRG00001003812) #33	ENSCGRG00001006690	Gtdc1 (ENSCGRG00001014426) #34	ENSCGRG00001008381	Arhgap15 (ENSCGRG00001011371) #36	Kynu (ENSCGRG00001005556) #37	ENSCGRG00001012428
Golden Hamster	MODERN SPECIES	633	Nr4a2 (ENSMAUG00000009371)	ENSMAUG00000018084	Galnt13 (ENSMAUG00000007643)	Rprm (ENSMAUG00000018060)	Arl6ip6 (ENSMAUG00000001987)	Prpf40a (ENSMAUG00000020074)	Fmnl2 (ENSMAUG00000013048)	Stam2 (ENSMAUG00000000322) #8	Cacnb4 (ENSMAUG00000014567) #9	Arl5a (ENSMAUG00000011769) #10	Neb (ENSMAUG00000004953) #11	Rif1 (ENSMAUG00000013158) #12	Nmi (ENSMAUG00000011421) #15	Rbm43 (ENSMAUG00000012908) #16	Rnd3 (ENSMAUG00000011617) #21	Mmadhc (ENSMAUG00000011028) #22	Lypd6 (ENSMAUG00000009256) #23	Lypd6b (ENSMAUG00000013712) #24	Kif5c (ENSMAUG00000009793) #25	ENSMAUG00000001219 #27	ENSMAUG00000000214 #29	Orc4 (ENSMAUG00000013801) #30	Acvr2a (ENSMAUG00000018729) #32	ENSMAUG00000017030	ENSMAUG00000016231	Zeb2 (ENSMAUG00000015393) #33	Gtdc1 (ENSMAUG00000001170) #34	Arhgap15 (ENSMAUG00000012165) #36	Kynu (ENSMAUG00000013067) #37	ENSMAUG00000009235	Lrp1b (ENSMAUG00000019371)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1881							ENSNGAG00000011525 #11	Rif1 (ENSNGAG00000009268) #12	Tnfaip6 (ENSNGAG00000007671) #13	ENSNGAG00000013509	Rbm43 (ENSNGAG00000016028) #16	Tas2r134 (ENSNGAG00000015380)	Rnd3 (ENSNGAG00000001477) #21	ENSNGAG00000000384	ENSNGAG00000014803	Mmadhc (ENSNGAG00000008470) #22	Lypd6 (ENSNGAG00000010779) #23	Lypd6b (ENSNGAG00000012606) #24	Kif5c (ENSNGAG00000020904) #25	Epc2 (ENSNGAG00000015488) #27	Mbd5 (ENSNGAG00000018784) #29	Orc4 (ENSNGAG00000012001) #30	Acvr2a (ENSNGAG00000020006) #32	Zeb2 (ENSNGAG00000016618) #33	ENSNGAG00000000981	Gtdc1 (ENSNGAG00000011627) #34	Arhgap15 (ENSNGAG00000003717) #36	Kynu (ENSNGAG00000015519) #37	ENSNGAG00000005556	Lrp1b (ENSNGAG00000000689)	ENSNGAG00000009773
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	46	ENSJJAG00000023428	Arl6ip6 (ENSJJAG00000019266)	Prpf40a (ENSJJAG00000004636)	Fmnl2 (ENSJJAG00000021375)	Stam2 (ENSJJAG00000009817) #8	Cacnb4 (ENSJJAG00000016900) #9	ENSJJAG00000015512 #10	Neb (ENSJJAG00000012568) #11	Rif1 (ENSJJAG00000023000) #12	Tnfaip6 (ENSJJAG00000020536) #13	Nmi (ENSJJAG00000011126) #15	Rbm43 (ENSJJAG00000000368) #16	ENSJJAG00000011149	Rnd3 (ENSJJAG00000015179) #21	ENSJJAG00000011930	ENSJJAG00000012494 #22	Lypd6 (ENSJJAG00000020503) #23	Lypd6b (ENSJJAG00000011004) #24	ENSJJAG00000021666 #25	Epc2 (ENSJJAG00000023818) #27	Mbd5 (ENSJJAG00000023609) #29	Orc4 (ENSJJAG00000011085) #30	Acvr2a (ENSJJAG00000014798) #32	ENSJJAG00000017205	ENSJJAG00000000614	ENSJJAG00000011334	Zeb2 (ENSJJAG00000015138) #33	ENSJJAG00000012093	Gtdc1 (ENSJJAG00000022232) #34	Arhgap15 (ENSJJAG00000002439) #36	Kynu (ENSJJAG00000011644) #37
Lesser Egyptian jerboa	MODERN SPECIES	42	Washc4 (ENSJJAG00000019116)	Aldh1l2 (ENSJJAG00000014933)	Nopchap1 (ENSJJAG00000021635)	Slc41a2 (ENSJJAG00000020225)	Chst11 (ENSJJAG00000021100)	Txnrd1 (ENSJJAG00000011665)	Eid3 (ENSJJAG00000004838)	ENSJJAG00000021684	Hcfc2 (ENSJJAG00000019901)	Glt8d2 (ENSJJAG00000017860)	ENSJJAG00000022782	Hsp90b1 (ENSJJAG00000020393)	Ttc41 (ENSJJAG00000009462)	Nt5dc3 (ENSJJAG00000017888)	Stab2 (ENSJJAG00000015484)	ENSJJAG00000018477 #22	Ascl1 (ENSJJAG00000016132)	Pah (ENSJJAG00000017337)	ENSJJAG00000019988	Pmch (ENSJJAG00000021592)	ENSJJAG00000021125	Nup37 (ENSJJAG00000018864)	Washc3 (ENSJJAG00000019930)	Dram1 (ENSJJAG00000023953)	ENSJJAG00000022706	Sycp3 (ENSJJAG00000017653)	ENSJJAG00000001967	Mybpc1 (ENSJJAG00000020768)	ENSJJAG00000020719	Utp20 (ENSJJAG00000019321)	Slc5a8 (ENSJJAG00000018761)
Kangaroo rat	MODERN SPECIES	324	Rprm (ENSDORG00000003407)	ENSDORG00000028417	Arl6ip6 (ENSDORG00000006761)	Prpf40a (ENSDORG00000006757)	Fmnl2 (ENSDORG00000029929)	Stam2 (ENSDORG00000007927) #8	Cacnb4 (ENSDORG00000007926) #9	ENSDORG00000003082 #10	Neb (ENSDORG00000004258) #11	Tnfaip6 (ENSDORG00000016446) #13	ENSDORG00000028394	Nmi (ENSDORG00000024973) #15	ENSDORG00000009537 #16	ENSDORG00000023373	Rnd3 (ENSDORG00000024571) #21	Mmadhc (ENSDORG00000000305) #22	Lypd6 (ENSDORG00000023908) #23	Lypd6b (ENSDORG00000013117) #24	Kif5c (ENSDORG00000006160) #25	Epc2 (ENSDORG00000001353) #27	ENSDORG00000014257 #29	ENSDORG00000026847	Orc4 (ENSDORG00000014453) #30	Acvr2a (ENSDORG00000014448) #32	ENSDORG00000028052
Lagomorpha	ANCESTRAL SPECIES	12	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Rabbit	MODERN SPECIES	18	ENSOCUG00000037766	ENSOCUG00000013216	STAM2 (ENSOCUG00000000344) #8	ENSOCUG00000000144 #9	ARL5A (ENSOCUG00000035346) #10	NEB (ENSOCUG00000017458) #11	ENSOCUG00000035924	RIF1 (ENSOCUG00000017435) #12	TNFAIP6 (ENSOCUG00000013688) #13	ENSOCUG00000038635	NMI (ENSOCUG00000001001) #15	RBM43 (ENSOCUG00000026185) #16	ENSOCUG00000025786	ENSOCUG00000036417	RND3 (ENSOCUG00000001751) #21	MMADHC (ENSOCUG00000008124) #22	LYPD6 (ENSOCUG00000008118) #23	ENSOCUG00000030777	LYPD6B (ENSOCUG00000008346) #24	KIF5C (ENSOCUG00000009699) #25	EPC2 (ENSOCUG00000012712) #27	ENSOCUG00000034178	ENSOCUG00000033587 #20	MBD5 (ENSOCUG00000010432) #29	ORC4 (ENSOCUG00000016412) #30	ACVR2A (ENSOCUG00000016398) #32	ENSOCUG00000030462	ZEB2 (ENSOCUG00000027880) #33	ENSOCUG00000038697	GTDC1 (ENSOCUG00000002102) #34	ARHGAP15 (ENSOCUG00000000471) #36
Pika	MODERN SPECIES	6565																MMADHC (ENSOPRG00000000804) #22
Tree shrew	MODERN SPECIES	3558																ENSTBEG00000010789 #22
Primates	ANCESTRAL SPECIES	13	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Strepsirrhini	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Lemuriformes	ANCESTRAL SPECIES	5	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Mouse lemur	MODERN SPECIES	30	GALNT13 (ENSMICG00000013917)	RPRM (ENSMICG00000038767)	ARL6IP6 (ENSMICG00000042407)	PRPF40A (ENSMICG00000017146)	FMNL2 (ENSMICG00000017132)	STAM2 (ENSMICG00000009382) #8	CACNB4 (ENSMICG00000005867) #9	ENSMICG00000015788 #10	NEB (ENSMICG00000007063) #11	RIF1 (ENSMICG00000046127) #12	TNFAIP6 (ENSMICG00000045439) #13	NMI (ENSMICG00000046560) #15	RBM43 (ENSMICG00000002078) #16	ENSMICG00000033304	RND3 (ENSMICG00000035694) #21	MMADHC (ENSMICG00000005952) #22	LYPD6 (ENSMICG00000041550) #23	LYPD6B (ENSMICG00000016688) #24	KIF5C (ENSMICG00000016670) #25	EPC2 (ENSMICG00000016659) #27	MBD5 (ENSMICG00000017046) #29	ORC4 (ENSMICG00000004578) #30	ACVR2A (ENSMICG00000004565) #32	ZEB2 (ENSMICG00000017462) #33	GTDC1 (ENSMICG00000007473) #34	ARHGAP15 (ENSMICG00000043939) #36	SCN3A (ENSMICG00000001132)	ENSMICG00000002843	CSRNP3 (ENSMICG00000015267)	GALNT3 (ENSMICG00000015295)	TTC21B (ENSMICG00000015487)
Lemuriformes_a	ANCESTRAL SPECIES	81	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00390000008673.c.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32
Coquerels sifaka	DUPLICATION
Coquerels sifaka	DUPLICATION
Coquerels sifaka	MODERN SPECIES	116	RPRM (ENSPCOG00000011465)	ARL6IP6 (ENSPCOG00000026472)	PRPF40A (ENSPCOG00000021456)	FMNL2 (ENSPCOG00000028832)	ENSPCOG00000017905	STAM2 (ENSPCOG00000015690) #8	CACNB4 (ENSPCOG00000024069) #9	ARL5A (ENSPCOG00000016563) #10	NEB (ENSPCOG00000014125) #11	RIF1 (ENSPCOG00000027888) #12	TNFAIP6 (ENSPCOG00000017912) #13	NMI (ENSPCOG00000028467) #15	RBM43 (ENSPCOG00000024727) #16	RND3 (ENSPCOG00000025763) #21	ENSPCOG00000028209	ENSPCOG00000015253 #22	LYPD6 (ENSPCOG00000024054) #23	LYPD6B (ENSPCOG00000024216) #24	KIF5C (ENSPCOG00000024550) #25	EPC2 (ENSPCOG00000016814) #27	MBD5 (ENSPCOG00000007503) #29	ORC4 (ENSPCOG00000005005) #30	ACVR2A (ENSPCOG00000016732) #32
Coquerels sifaka	MODERN SPECIES	83	PON3 (ENSPCOG00000026838)	PON2 (ENSPCOG00000023699)	ASB4 (ENSPCOG00000024006)	PDK4 (ENSPCOG00000015783)	DYNC1I1 (ENSPCOG00000018842)	SLC25A13 (ENSPCOG00000021703)	ENSPCOG00000025433	ENSPCOG00000018050	ENSPCOG00000022335	DLX6 (ENSPCOG00000018676)	DLX5 (ENSPCOG00000024882)	ENSPCOG00000016090	TAC1 (ENSPCOG00000021374)	ENSPCOG00000025256	C1GALT1 (ENSPCOG00000015839)	ENSPCOG00000018949 #22	COL28A1 (ENSPCOG00000022435)	MIOS (ENSPCOG00000011418)	RPA3 (ENSPCOG00000022659)	UMAD1 (ENSPCOG00000016044)	GLCCI1 (ENSPCOG00000008498)	ICA1 (ENSPCOG00000003590)	NXPH1 (ENSPCOG00000018464)	ENSPCOG00000018675
Coquerels sifaka	MODERN SPECIES	760	C11orf71 (ENSPCOG00000015231)	NNMT (ENSPCOG00000027693)	ZBTB16 (ENSPCOG00000004404)	HTR3A (ENSPCOG00000025438)	HTR3B (ENSPCOG00000013139)	ENSPCOG00000019270	USP28 (ENSPCOG00000018279)	ZW10 (ENSPCOG00000020599)	TMPRSS5 (ENSPCOG00000006628)	DRD2 (ENSPCOG00000007514)	TTC12 (ENSPCOG00000024368)	NCAM1 (ENSPCOG00000022925)	PTS (ENSPCOG00000024186)	BCO2 (ENSPCOG00000020109)	TEX12 (ENSPCOG00000023524)	ENSPCOG00000028355 #22	ENSPCOG00000024440	SDHD (ENSPCOG00000019028)	TIMM8B (ENSPCOG00000026969)	NKAPD1 (ENSPCOG00000003388)	PIH1D2 (ENSPCOG00000024160)	DLAT (ENSPCOG00000014290)	DIXDC1 (ENSPCOG00000014302)	C11orf52 (ENSPCOG00000016017)	HSPB2 (ENSPCOG00000023616)	CRYAB (ENSPCOG00000015670)	CFAP68 (ENSPCOG00000021613)	FDXACB1 (ENSPCOG00000027443)	ALG9 (ENSPCOG00000013221)	PPP2R1B (ENSPCOG00000022343)	SIK2 (ENSPCOG00000010314)
Greater bamboo lemur	MODERN SPECIES	1172														ENSPSMG00000005495	ENSPSMG00000005498	MMADHC (ENSPSMG00000005529) #22	LYPD6 (ENSPSMG00000005551) #23	LYPD6B (ENSPSMG00000005573) #24	KIF5C (ENSPSMG00000005639) #25	EPC2 (ENSPSMG00000005654) #27	MBD5 (ENSPSMG00000005699) #29	ENSPSMG00000005764	ORC4 (ENSPSMG00000005784) #30	ACVR2A (ENSPSMG00000005815) #32
Bushbaby	MODERN SPECIES	179							STAM2 (ENSOGAG00000016811) #8	CACNB4 (ENSOGAG00000011426) #9	ARL5A (ENSOGAG00000011424) #10	NEB (ENSOGAG00000006154) #11	RIF1 (ENSOGAG00000006141) #12	TNFAIP6 (ENSOGAG00000011099) #13	NMI (ENSOGAG00000002762) #15	RBM43 (ENSOGAG00000002761) #16	RND3 (ENSOGAG00000006980) #21	MMADHC (ENSOGAG00000034385) #22	LYPD6 (ENSOGAG00000009025) #23	LYPD6B (ENSOGAG00000009022) #24	KIF5C (ENSOGAG00000009021) #25	ENSOGAG00000027538	EPC2 (ENSOGAG00000009018) #27	MBD5 (ENSOGAG00000005182) #29	ENSOGAG00000007606	ORC4 (ENSOGAG00000004022) #30	ACVR2A (ENSOGAG00000004021) #32	ENSOGAG00000025795	ZEB2 (ENSOGAG00000010020) #33	GTDC1 (ENSOGAG00000001984) #34	ARHGAP15 (ENSOGAG00000001981) #36	KYNU (ENSOGAG00000001979) #37	ENSOGAG00000033357
Haplorrhini	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Tarsier	DUPLICATION
Tarsier	MODERN SPECIES	5244																MMADHC (ENSTSYG00000009075) #22	LYPD6 (ENSTSYG00000033724) #23
Tarsier	MODERN SPECIES	6574		MMGT1 (ENSTSYG00000000021)	SLC9A6 (ENSTSYG00000010724)	ENSTSYG00000030938	FHL1 (ENSTSYG00000000860)	MAP7D3 (ENSTSYG00000011953)	ADGRG4 (ENSTSYG00000036196)	ENSTSYG00000033716	BRS3 (ENSTSYG00000003032)	HTATSF1 (ENSTSYG00000028876)	VGLL1 (ENSTSYG00000005070)	TNLG8B (ENSTSYG00000010623)	ARHGEF6 (ENSTSYG00000013105)	RBMX (ENSTSYG00000009555)	ENSTSYG00000034869	ENSTSYG00000026206 #22
Simiiformes	ANCESTRAL SPECIES	15	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000154530.r.b.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Platyrrhini	ANCESTRAL SPECIES	9	ENSGT00950000183077.a.a.a.a.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000154530.r.b.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00390000002748.j	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Mas night monkey	MODERN SPECIES	1325	ARL6IP6 (ENSANAG00000034126)	PRPF40A (ENSANAG00000023828)	FMNL2 (ENSANAG00000029876)	ENSANAG00000024796	ENSANAG00000026006	STAM2 (ENSANAG00000000022) #8	CACNB4 (ENSANAG00000035973) #9	ARL5A (ENSANAG00000027698) #10	NEB (ENSANAG00000025115) #11	RIF1 (ENSANAG00000024840) #12	TNFAIP6 (ENSANAG00000024087) #13	NMI (ENSANAG00000034417) #15	RBM43 (ENSANAG00000032206) #16	ENSANAG00000022645	RND3 (ENSANAG00000033420) #21	MMADHC (ENSANAG00000038372) #22	LYPD6 (ENSANAG00000032366) #23	LYPD6B (ENSANAG00000034708) #24	KIF5C (ENSANAG00000034068) #25	ENSANAG00000027793	EPC2 (ENSANAG00000037383) #27	MBD5 (ENSANAG00000033779) #29	ORC4 (ENSANAG00000023030) #30	ACVR2A (ENSANAG00000030181) #32
Cebidae	ANCESTRAL SPECIES	11	ENSGT00390000010523.c.b	ENSGT00950000183077.a.a.a.a.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00390000002748.j	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	78	ENSCJAG00000048365	RAB40AL (ENSCJAG00000059712)	NXF3 (ENSCJAG00000003435)	ENSCJAG00000039760	ENSCJAG00000062271	TCEAL8 (ENSCJAG00000036572)	TCEAL5 (ENSCJAG00000046955)	ENSCJAG00000003425	RAB40A (ENSCJAG00000057721)	TCEAL4 (ENSCJAG00000075471)	ENSCJAG00000003405	ENSCJAG00000003374	TMEM31 (ENSCJAG00000003393)	PLP1 (ENSCJAG00000003349)	RAB9B (ENSCJAG00000003347)	ENSCJAG00000038643 #22	ENSCJAG00000042281	ENSCJAG00000082114	ENSCJAG00000070962	ENSCJAG00000085484	H2BW1 (ENSCJAG00000033818)	ENSCJAG00000071684	SLC25A53 (ENSCJAG00000085438)	ZCCHC18 (ENSCJAG00000008252)	FAM199X (ENSCJAG00000008241)	ENSCJAG00000008237	IL1RAPL2 (ENSCJAG00000008213)	TEX13A (ENSCJAG00000081533)	NRK (ENSCJAG00000008160)	RADX (ENSCJAG00000008118)	RNF128 (ENSCJAG00000008099)
Marmoset	MODERN SPECIES	18	STAM2 (ENSCJAG00000044417) #8	CACNB4 (ENSCJAG00000003326) #9	ENSCJAG00000040846 #10	ENSCJAG00000086283	ENSCJAG00000075900	NEB (ENSCJAG00000003175) #11	RIF1 (ENSCJAG00000003138) #12	TNFAIP6 (ENSCJAG00000003134) #13	NMI (ENSCJAG00000003127) #15	RBM43 (ENSCJAG00000003125) #16	ENSCJAG00000083510	RND3 (ENSCJAG00000045984) #21	ENSCJAG00000071388	ENSCJAG00000075779	ENSCJAG00000070079	ENSCJAG00000003086 #22	LYPD6 (ENSCJAG00000055489) #23	LYPD6B (ENSCJAG00000003077) #24	KIF5C (ENSCJAG00000003053) #25	ENSCJAG00000076357	EPC2 (ENSCJAG00000012637) #27	MBD5 (ENSCJAG00000012594) #29	ORC4 (ENSCJAG00000012561) #30	ACVR2A (ENSCJAG00000012496) #32	ENSCJAG00000065177	ZEB2 (ENSCJAG00000012457) #33	ENSCJAG00000070871	GTDC1 (ENSCJAG00000012421) #34	ENSCJAG00000079909	ARHGAP15 (ENSCJAG00000012381) #36	KYNU (ENSCJAG00000012322) #37
Cebidae_a	ANCESTRAL SPECIES	27	ENSGT00390000010523.c.b	ENSGT00950000183077.a.a.a.a.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00390000002748.j	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Capuchin	DUPLICATION
Capuchin	MODERN SPECIES	27	ENSCCAG00000019893	ARL6IP6 (ENSCCAG00000024457)	PRPF40A (ENSCCAG00000034856)	FMNL2 (ENSCCAG00000028051)	ENSCCAG00000020790	ENSCCAG00000007786	STAM2 (ENSCCAG00000030900) #8	CACNB4 (ENSCCAG00000036673) #9	ARL5A (ENSCCAG00000023321) #10	NEB (ENSCCAG00000026566) #11	RIF1 (ENSCCAG00000024760) #12	TNFAIP6 (ENSCCAG00000022288) #13	NMI (ENSCCAG00000022500) #15	RBM43 (ENSCCAG00000020911) #16	RND3 (ENSCCAG00000030386) #21	MMADHC (ENSCCAG00000036477) #22	LYPD6 (ENSCCAG00000028399) #23	LYPD6B (ENSCCAG00000030062) #24	KIF5C (ENSCCAG00000031241) #25	EPC2 (ENSCCAG00000037425) #27	MBD5 (ENSCCAG00000030324) #29	ORC4 (ENSCCAG00000008932) #30	ACVR2A (ENSCCAG00000034862) #32	ENSCCAG00000019840	ZEB2 (ENSCCAG00000036823) #33	GTDC1 (ENSCCAG00000001331) #34	ARHGAP15 (ENSCCAG00000034364) #36	KYNU (ENSCCAG00000028624) #37	LRP1B (ENSCCAG00000026411)	ENSCCAG00000028899	ENSCCAG00000030027
Capuchin	MODERN SPECIES	324				SALL3 (ENSCCAG00000034863)	ATP9B (ENSCCAG00000019163)	NFATC1 (ENSCCAG00000027097)	CTDP1 (ENSCCAG00000022629)	ENSCCAG00000018820	KCNG2 (ENSCCAG00000023074)	SLC66A2 (ENSCCAG00000034335)	HSBP1L1 (ENSCCAG00000023553)	ENSCCAG00000021200	RBFA (ENSCCAG00000025293)	ADNP2 (ENSCCAG00000037993)	PARD6G (ENSCCAG00000028220)	ENSCCAG00000030742 #22
Bolivian squirrel monkey	DUPLICATION
Bolivian squirrel monkey	MODERN SPECIES	44	PHF14 (ENSSBOG00000033689)	ENSSBOG00000027959	THSD7A (ENSSBOG00000022829)	ARID1A (ENSSBOG00000021791)	PIGV (ENSSBOG00000031404)	ZDHHC18 (ENSSBOG00000027289)	SFN (ENSSBOG00000010021)	ENSSBOG00000021731	GPN2 (ENSSBOG00000031587)	GPATCH3 (ENSSBOG00000019680)	NR0B2 (ENSSBOG00000026068)	NUDC (ENSSBOG00000035376)	KDF1 (ENSSBOG00000022048)	TENT5B (ENSSBOG00000023376)	SLC9A1 (ENSSBOG00000034296)	ENSSBOG00000026222 #22	WDTC1 (ENSSBOG00000024363)	TMEM222 (ENSSBOG00000031879)	SYTL1 (ENSSBOG00000022361)	MAP3K6 (ENSSBOG00000022232)	FCN3 (ENSSBOG00000035705)	CD164L2 (ENSSBOG00000016074)	GPR3 (ENSSBOG00000015463)	WASF2 (ENSSBOG00000022556)	ENSSBOG00000002550	AHDC1 (ENSSBOG00000026685)	FGR (ENSSBOG00000033596)	IFI6 (ENSSBOG00000034960)	FAM76A (ENSSBOG00000026158)	STX12 (ENSSBOG00000014436)	PPP1R8 (ENSSBOG00000032910)
Bolivian squirrel monkey	MODERN SPECIES	46	RPRM (ENSSBOG00000009917)	ARL6IP6 (ENSSBOG00000029584)	PRPF40A (ENSSBOG00000015435)	FMNL2 (ENSSBOG00000027176)	ENSSBOG00000023807	ENSSBOG00000027242 #8	ENSSBOG00000023639	CACNB4 (ENSSBOG00000025206) #9	ARL5A (ENSSBOG00000034323) #10	NEB (ENSSBOG00000031622) #11	RIF1 (ENSSBOG00000029530) #12	TNFAIP6 (ENSSBOG00000034644) #13	NMI (ENSSBOG00000035067) #15	RBM43 (ENSSBOG00000022371) #16	RND3 (ENSSBOG00000025108) #21	ENSSBOG00000035889 #22	LYPD6 (ENSSBOG00000019011) #23	LYPD6B (ENSSBOG00000017701) #24	KIF5C (ENSSBOG00000013675) #25	EPC2 (ENSSBOG00000035940) #27	MBD5 (ENSSBOG00000024663) #29	ORC4 (ENSSBOG00000028104) #30	ACVR2A (ENSSBOG00000025103) #32	ENSSBOG00000018747	ZEB2 (ENSSBOG00000026124) #33	ENSSBOG00000025406	GTDC1 (ENSSBOG00000030737) #34	ENSSBOG00000023369	ARHGAP15 (ENSSBOG00000027845) #36	KYNU (ENSSBOG00000029002) #37	ENSSBOG00000021516
Catarrhini	ANCESTRAL SPECIES	16	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000154530.r.b.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Hominoidea	ANCESTRAL SPECIES	15	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000154530.r.b.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Hominidae	ANCESTRAL SPECIES	17	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000154530.r.b.b	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	14	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v.f #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Gorilla	MODERN SPECIES	15	GALNT13 (ENSGGOG00000034959)	RPRM (ENSGGOG00000002162)	ARL6IP6 (ENSGGOG00000015604)	PRPF40A (ENSGGOG00000015592)	ENSGGOG00000028462	FMNL2 (ENSGGOG00000008600)	STAM2 (ENSGGOG00000011441) #8	CACNB4 (ENSGGOG00000038672) #9	ENSGGOG00000002066 #10	NEB (ENSGGOG00000016489) #11	RIF1 (ENSGGOG00000040178) #12	TNFAIP6 (ENSGGOG00000022498) #13	NMI (ENSGGOG00000013518) #15	RBM43 (ENSGGOG00000041294) #16	RND3 (ENSGGOG00000036127) #21	MMADHC (ENSGGOG00000027348) #22	LYPD6 (ENSGGOG00000007400) #23	LYPD6B (ENSGGOG00000000801) #24	KIF5C (ENSGGOG00000016596) #25	EPC2 (ENSGGOG00000011299) #27	MBD5 (ENSGGOG00000003833) #29	ORC4 (ENSGGOG00000022258) #30	ACVR2A (ENSGGOG00000015713) #32	ZEB2 (ENSGGOG00000003186) #33	ENSGGOG00000039783	GTDC1 (ENSGGOG00000015776) #34	ARHGAP15 (ENSGGOG00000034982) #36	KYNU (ENSGGOG00000007406) #37	LRP1B (ENSGGOG00000040868)	ENSGGOG00000026916	NXPH2 (ENSGGOG00000008363)
Homo/Pan group	ANCESTRAL SPECIES	13	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v.f #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Pan	ANCESTRAL SPECIES	12	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v.f #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00960000190927	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00390000007384.c.b	ENSGT00940000157521.b	ENSGT00910000147617
Chimpanzee	MODERN SPECIES	15	RPRM (ENSPTRG00000012545)	ARL6IP6 (ENSPTRG00000012544)	PRPF40A (ENSPTRG00000012543)	ENSPTRG00000048776	FMNL2 (ENSPTRG00000012541)	STAM2 (ENSPTRG00000012540) #8	CACNB4 (ENSPTRG00000047916) #9	ARL5A (ENSPTRG00000012538) #10	ENSPTRG00000039444	NEB (ENSPTRG00000012536) #11	RIF1 (ENSPTRG00000012534) #12	TNFAIP6 (ENSPTRG00000012533) #13	NMI (ENSPTRG00000012531) #15	RBM43 (ENSPTRG00000046668) #16	RND3 (ENSPTRG00000012527) #21	MMADHC (ENSPTRG00000012525) #22	LYPD6 (ENSPTRG00000012524) #23	LYPD6B (ENSPTRG00000012523) #24	KIF5C (ENSPTRG00000012521) #25	ENSPTRG00000051205	EPC2 (ENSPTRG00000012518) #27	MBD5 (ENSPTRG00000029184) #29	ORC4 (ENSPTRG00000012515) #30	ACVR2A (ENSPTRG00000012514) #32	ZEB2 (ENSPTRG00000012513) #33	GTDC1 (ENSPTRG00000012511) #34	ARHGAP15 (ENSPTRG00000012510) #36	KYNU (ENSPTRG00000012509) #37	ENSPTRG00000048004	LRP1B (ENSPTRG00000012508)	ENSPTRG00000042896
Bonobo	MODERN SPECIES	15	RPRM (ENSPPAG00000002667)	ARL6IP6 (ENSPPAG00000026309)	PRPF40A (ENSPPAG00000040033)	ENSPPAG00000009946	FMNL2 (ENSPPAG00000038903)	STAM2 (ENSPPAG00000037568) #8	CACNB4 (ENSPPAG00000028311) #9	ARL5A (ENSPPAG00000033494) #10	ENSPPAG00000043206 #11	RIF1 (ENSPPAG00000023754) #12	TNFAIP6 (ENSPPAG00000029874) #13	NMI (ENSPPAG00000034174) #15	ENSPPAG00000028605	RBM43 (ENSPPAG00000035042) #16	RND3 (ENSPPAG00000042575) #21	MMADHC (ENSPPAG00000029746) #22	LYPD6 (ENSPPAG00000043249) #23	LYPD6B (ENSPPAG00000039900) #24	KIF5C (ENSPPAG00000031052) #25	ENSPPAG00000001157	EPC2 (ENSPPAG00000040114) #27	MBD5 (ENSPPAG00000037170) #29	ORC4 (ENSPPAG00000043794) #30	ACVR2A (ENSPPAG00000043981) #32	ZEB2 (ENSPPAG00000025839) #33	GTDC1 (ENSPPAG00000033824) #34	ARHGAP15 (ENSPPAG00000031056) #36	KYNU (ENSPPAG00000008434) #37	ENSPPAG00000039032	LRP1B (ENSPPAG00000003706)	ENSPPAG00000041987
Human	MODERN SPECIES	11	KCNJ3 (ENSG00000162989)	GALNT13 (ENSG00000144278)	RPRM (ENSG00000177519)	ARL6IP6 (ENSG00000177917)	PRPF40A (ENSG00000196504)	FMNL2 (ENSG00000157827)	STAM2 (ENSG00000115145) #8	CACNB4 (ENSG00000182389) #9	ARL5A (ENSG00000162980) #10	NEB (ENSG00000183091) #11	RIF1 (ENSG00000080345) #12	TNFAIP6 (ENSG00000123610) #13	NMI (ENSG00000123609) #15	RBM43 (ENSG00000184898) #16	RND3 (ENSG00000115963) #21	MMADHC (ENSG00000168288) #22	LYPD6 (ENSG00000187123) #23	LYPD6B (ENSG00000150556) #24	KIF5C (ENSG00000168280) #25	EPC2 (ENSG00000135999) #27	MBD5 (ENSG00000204406) #29	ORC4 (ENSG00000115947) #30	ACVR2A (ENSG00000121989) #32	ZEB2 (ENSG00000169554) #33	GTDC1 (ENSG00000121964) #34	ARHGAP15 (ENSG00000075884) #36	KYNU (ENSG00000115919) #37	LRP1B (ENSG00000168702)	NXPH2 (ENSG00000144227)	SPOPL (ENSG00000144228)	HNMT (ENSG00000150540)
Orangutan	MODERN SPECIES	15	ARL6IP6 (ENSPPYG00000012855)	PRPF40A (ENSPPYG00000012854)	ENSPPYG00000012852	FMNL2 (ENSPPYG00000012851)	STAM2 (ENSPPYG00000012850) #8	CACNB4 (ENSPPYG00000012849) #9	ARL5A (ENSPPYG00000012848) #10	ENSPPYG00000032033	NEB (ENSPPYG00000012847) #11	RIF1 (ENSPPYG00000012846) #12	TNFAIP6 (ENSPPYG00000012845) #13	ENSPPYG00000012844 #15	RBM43 (ENSPPYG00000037248) #16	ENSPPYG00000036365	RND3 (ENSPPYG00000012842) #21	MMADHC (ENSPPYG00000012840) #22	LYPD6 (ENSPPYG00000012839) #23	ENSPPYG00000029593 #24	KIF5C (ENSPPYG00000012838) #25	ENSPPYG00000032644	EPC2 (ENSPPYG00000012837) #27	ENSPPYG00000036116	MBD5 (ENSPPYG00000012836) #29	ORC4 (ENSPPYG00000012835) #30	ACVR2A (ENSPPYG00000012834) #32	ZEB2 (ENSPPYG00000012831) #33	ENSPPYG00000031095 #34	GTDC1 (ENSPPYG00000034543) #34	ARHGAP15 (ENSPPYG00000012828) #36	KYNU (ENSPPYG00000012827) #37	LRP1B (ENSPPYG00000012826)
Gibbon	DUPLICATION
Gibbon	MODERN SPECIES	7	PRPF40A (ENSNLEG00000011324)	FMNL2 (ENSNLEG00000026694)	ENSNLEG00000019196	ENSNLEG00000029701	STAM2 (ENSNLEG00000011293) #8	CACNB4 (ENSNLEG00000029444) #9	ENSNLEG00000030371	ARL5A (ENSNLEG00000011191) #10	NEB (ENSNLEG00000011170) #11	RIF1 (ENSNLEG00000010955) #12	TNFAIP6 (ENSNLEG00000010934) #13	NMI (ENSNLEG00000010893) #15	RBM43 (ENSNLEG00000010889) #16	RND3 (ENSNLEG00000010846) #21	ENSNLEG00000035632	MMADHC (ENSNLEG00000010795) #22	IQCE (ENSNLEG00000010709)	BRAT1 (ENSNLEG00000010655)	AMZ1 (ENSNLEG00000010620)	GNA12 (ENSNLEG00000033618)	CARD11 (ENSNLEG00000010543)	ENSNLEG00000015435	ENSNLEG00000015459	AP5Z1 (ENSNLEG00000015462)	RADIL (ENSNLEG00000015475)	MMD2 (ENSNLEG00000015480)	ENSNLEG00000036049	RBAK (ENSNLEG00000030817)	WIPI2 (ENSNLEG00000015492)	ENSNLEG00000027537	ENSNLEG00000031210
Gibbon	MODERN SPECIES	5	COMMD9 (ENSNLEG00000017943)	LDLRAD3 (ENSNLEG00000017940)	ENSNLEG00000033071	ENSNLEG00000034033	TRIM44 (ENSNLEG00000017939)	FJX1 (ENSNLEG00000018184)	PAMR1 (ENSNLEG00000017937)	SLC1A2 (ENSNLEG00000032279)	ENSNLEG00000031295	CD44 (ENSNLEG00000017932)	PDHX (ENSNLEG00000017930)	APIP (ENSNLEG00000028265)	EHF (ENSNLEG00000017927)	ELF5 (ENSNLEG00000017925)	CAT (ENSNLEG00000017922)	ENSNLEG00000027640 #22	ENSNLEG00000017921	NAT10 (ENSNLEG00000017916)	CAPRIN1 (ENSNLEG00000017913)	LMO2 (ENSNLEG00000028429)	ENSNLEG00000018183	FBXO3 (ENSNLEG00000017908)	ENSNLEG00000027673	KIAA1549L (ENSNLEG00000026545)	HIPK3 (ENSNLEG00000017906)	CSTF3 (ENSNLEG00000017901)	ENSNLEG00000030363	TCP11L1 (ENSNLEG00000017899)	ENSNLEG00000017897	QSER1 (ENSNLEG00000017896)	PRRG4 (ENSNLEG00000028029)
Cercopithecidae	ANCESTRAL SPECIES	13	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00620000089259	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00940000153201.j.k.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Cercopithecinae	ANCESTRAL SPECIES	11	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00940000153201.j.k.a.a.b.a.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Vervet Monkey	MODERN SPECIES	1	GALNT13 (ENSCSAG00000015977)	RPRM (ENSCSAG00000018646)	ENSCSAG00000015984 ##28	ARL6IP6 (ENSCSAG00000015990)	PRPF40A (ENSCSAG00000016002)	ENSCSAG00000016011	STAM2 (ENSCSAG00000016021) #8	CACNB4 (ENSCSAG00000016028) #9	NEB (ENSCSAG00000016065) #11	RIF1 (ENSCSAG00000016089) #12	TNFAIP6 (ENSCSAG00000016095) #13	NMI (ENSCSAG00000016102) #15	RBM43 (ENSCSAG00000016105) #16	RND3 (ENSCSAG00000016117) #21	ENSCSAG00000016123	MMADHC (ENSCSAG00000016144) #22	LYPD6 (ENSCSAG00000016149) #23	LYPD6B (ENSCSAG00000016151) #24	KIF5C (ENSCSAG00000016159) #25	ENSCSAG00000018645	EPC2 (ENSCSAG00000016167) #27	MBD5 (ENSCSAG00000016175) #29	ORC4 (ENSCSAG00000016183) #30	ACVR2A (ENSCSAG00000016192) #32	ZEB2 (ENSCSAG00000016197) #33	GTDC1 (ENSCSAG00000016202) #34	ARHGAP15 (ENSCSAG00000016210) #36	KYNU (ENSCSAG00000016218) #37	LRP1B (ENSCSAG00000016246)	NXPH2 (ENSCSAG00000016269)	SPOPL (ENSCSAG00000016280)
Cercopithecinae_a	ANCESTRAL SPECIES	16	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00940000153201.j.k.a.a.b.a.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37
Cercopithecinae_b	ANCESTRAL SPECIES	10	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00940000153201.j.k.a.a.b.a.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00910000146654	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01040000240515.h	ENSGT01020000230615	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36
Olive baboon	MODERN SPECIES	1	RPRM (ENSPANG00000016888)	ARL6IP6 (ENSPANG00000018067)	PRPF40A (ENSPANG00000022095)	FMNL2 (ENSPANG00000008524)	STAM2 (ENSPANG00000025044) #8	CACNB4 (ENSPANG00000008398) #9	ENSPANG00000009772 #10	NEB (ENSPANG00000005536) #11	RIF1 (ENSPANG00000008525) #12	TNFAIP6 (ENSPANG00000021874) #13	NMI (ENSPANG00000006057) #15	RBM43 (ENSPANG00000009533) #16	ENSPANG00000047432	RND3 (ENSPANG00000015939) #21	ENSPANG00000009096	MMADHC (ENSPANG00000019761) #22	ENSPANG00000038761	ENSPANG00000048846	LYPD6 (ENSPANG00000019895) #23	LYPD6B (ENSPANG00000022096) #24	KIF5C (ENSPANG00000018689) #25	ENSPANG00000042526	EPC2 (ENSPANG00000009534) #27	MBD5 (ENSPANG00000015848) #29	ORC4 (ENSPANG00000009846) #30	ACVR2A (ENSPANG00000012445) #32	ENSPANG00000035057	CLIC1 (ENSPANG00000019928)	ENSPANG00000015679	ENSPANG00000003757	ENSPANG00000043648
Cercopithecinae_d	ANCESTRAL SPECIES		ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00940000153201.j.k.a.a.b.a.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01040000240515.h	ENSGT01020000230615	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37
Sooty mangabey	MODERN SPECIES	480	ARL6IP6 (ENSCATG00000037038)	PRPF40A (ENSCATG00000043798)	ENSCATG00000039643	FMNL2 (ENSCATG00000030795)	STAM2 (ENSCATG00000045298) #8	CACNB4 (ENSCATG00000035449) #9	ARL5A (ENSCATG00000029667) #10	NEB (ENSCATG00000031600) #11	RIF1 (ENSCATG00000033353) #12	TNFAIP6 (ENSCATG00000043098) #13	NMI (ENSCATG00000045259) #15	ENSCATG00000038471	RBM43 (ENSCATG00000029617) #16	RND3 (ENSCATG00000042453) #21	ENSCATG00000036472	MMADHC (ENSCATG00000043511) #22	LYPD6 (ENSCATG00000030657) #23	LYPD6B (ENSCATG00000033638) #24	KIF5C (ENSCATG00000045100) #25	EPC2 (ENSCATG00000045291) #27	MBD5 (ENSCATG00000040834) #29	ORC4 (ENSCATG00000045066) #30	ACVR2A (ENSCATG00000033685) #32	ENSCATG00000039190	ENSCATG00000012613	ENSCATG00000012956	ZEB2 (ENSCATG00000038567) #33	ENSCATG00000017157	GTDC1 (ENSCATG00000040626) #34	ENSCATG00000042700	ARHGAP15 (ENSCATG00000036437) #36
Drill	MODERN SPECIES	965			ARL6IP6 (ENSMLEG00000019180)	PRPF40A (ENSMLEG00000012078)	FMNL2 (ENSMLEG00000039912)	STAM2 (ENSMLEG00000038778) #8	CACNB4 (ENSMLEG00000032404) #9	ENSMLEG00000039596 #10	NEB (ENSMLEG00000025619) #11	RIF1 (ENSMLEG00000042945) #12	TNFAIP6 (ENSMLEG00000039791) #13	NMI (ENSMLEG00000033257) #15	ENSMLEG00000033169	RBM43 (ENSMLEG00000032155) #16	RND3 (ENSMLEG00000035844) #21	MMADHC (ENSMLEG00000033230) #22
Macaca	ANCESTRAL SPECIES	15	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00910000147393	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00940000153201.j.k.a.a.b.a.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00390000010822.p	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a.e #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Macaca_a	ANCESTRAL SPECIES	17	ENSGT01100000263539.b.a.a.a.b.b.a.b.b.a.a.a.a.a.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714.v #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00390000010822.p	ENSGT00940000158526 #27	ENSGT00940000167556.b.b.a.b.a.a.a.b.b.b.b.b.a.a.a.a.b.a.a.b.a.a.a	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00390000015224.c.a.a.a.k.e.a	ENSGT00950000183208.A.c.a.e #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Rhesus	MODERN SPECIES	3	ENSMMUG00000056430	ARL6IP6 (ENSMMUG00000062827)	PRPF40A (ENSMMUG00000010812)	FMNL2 (ENSMMUG00000031452)	STAM2 (ENSMMUG00000010527) #8	CACNB4 (ENSMMUG00000010526) #9	ARL5A (ENSMMUG00000010521) #10	RIF1 (ENSMMUG00000008611) #12	TNFAIP6 (ENSMMUG00000010927) #13	NMI (ENSMMUG00000017781) #15	RBM43 (ENSMMUG00000044949) #16	RND3 (ENSMMUG00000016040) #21	ENSMMUG00000056410	ENSMMUG00000058846	ENSMMUG00000051118	MMADHC (ENSMMUG00000005633) #22	LYPD6 (ENSMMUG00000038492) #23	ENSMMUG00000056996	LYPD6B (ENSMMUG00000009475) #24	KIF5C (ENSMMUG00000009268) #25	ENSMMUG00000031468	EPC2 (ENSMMUG00000023176) #27	ENSMMUG00000054591	ENSMMUG00000049941	MBD5 (ENSMMUG00000014921) #29	ORC4 (ENSMMUG00000000043) #30	ACVR2A (ENSMMUG00000000042) #32	ENSMMUG00000006925	ENSMMUG00000055627	ENSMMUG00000052142	ENSMMUG00000065347
Crab-eating macaque	MODERN SPECIES	3	RPRM (ENSMFAG00000023756)	ARL6IP6 (ENSMFAG00000046021)	PRPF40A (ENSMFAG00000038480)	FMNL2 (ENSMFAG00000000995)	STAM2 (ENSMFAG00000039480) #8	CACNB4 (ENSMFAG00000044631) #9	ENSMFAG00000056377 #10	NEB (ENSMFAG00000000188) #11	RIF1 (ENSMFAG00000032233) #12	TNFAIP6 (ENSMFAG00000000925) #13	NMI (ENSMFAG00000045501) #15	RBM43 (ENSMFAG00000031648) #16	RND3 (ENSMFAG00000045221) #21	ENSMFAG00000037633	ENSMFAG00000060272	MMADHC (ENSMFAG00000001801) #22	LYPD6 (ENSMFAG00000002977) #23	LYPD6B (ENSMFAG00000046204) #24	KIF5C (ENSMFAG00000038774) #25	ENSMFAG00000052887	EPC2 (ENSMFAG00000002751) #27	ENSMFAG00000058250	MBD5 (ENSMFAG00000035493) #29	ORC4 (ENSMFAG00000031595) #30	ACVR2A (ENSMFAG00000003464) #32	ENSMFAG00000019961	ENSMFAG00000052786	ZEB2 (ENSMFAG00000030381) #33	GTDC1 (ENSMFAG00000032520) #34	ARHGAP15 (ENSMFAG00000016740) #36	KYNU (ENSMFAG00000041160) #37
Pig-tailed macaque	DUPLICATION
Pig-tailed macaque	MODERN SPECIES	193	ARL6IP6 (ENSMNEG00000041131)	PRPF40A (ENSMNEG00000042025)	FMNL2 (ENSMNEG00000042052)	ENSMNEG00000031306	STAM2 (ENSMNEG00000026377) #8	CACNB4 (ENSMNEG00000032652) #9	ARL5A (ENSMNEG00000035230) #10	NEB (ENSMNEG00000037586) #11	RIF1 (ENSMNEG00000031616) #12	TNFAIP6 (ENSMNEG00000005810) #13	NMI (ENSMNEG00000036210) #15	ENSMNEG00000043989	RBM43 (ENSMNEG00000030900) #16	RND3 (ENSMNEG00000034976) #21	ENSMNEG00000033300	MMADHC (ENSMNEG00000036865) #22	LYPD6 (ENSMNEG00000014126) #23	LYPD6B (ENSMNEG00000036224) #24	KIF5C (ENSMNEG00000022981) #25	EPC2 (ENSMNEG00000039186) #27	MBD5 (ENSMNEG00000029374) #29	ORC4 (ENSMNEG00000031287) #30	ACVR2A (ENSMNEG00000043553) #32	ENSMNEG00000036514	ENSMNEG00000033956	ENSMNEG00000007339
Pig-tailed macaque	MODERN SPECIES	485	PRR5L (ENSMNEG00000043138)	COMMD9 (ENSMNEG00000030213)	LDLRAD3 (ENSMNEG00000037863)	ENSMNEG00000045218	TRIM44 (ENSMNEG00000039165)	FJX1 (ENSMNEG00000021210)	PAMR1 (ENSMNEG00000038968)	SLC1A2 (ENSMNEG00000033227)	ENSMNEG00000027059	CD44 (ENSMNEG00000024975)	PDHX (ENSMNEG00000041540)	APIP (ENSMNEG00000037577)	EHF (ENSMNEG00000035998)	ELF5 (ENSMNEG00000036605)	CAT (ENSMNEG00000043629)	ENSMNEG00000043168 #22	ABTB2 (ENSMNEG00000011772)	NAT10 (ENSMNEG00000041284)	CAPRIN1 (ENSMNEG00000030485)	LMO2 (ENSMNEG00000031732)	FBXO3 (ENSMNEG00000045464)	C11orf91 (ENSMNEG00000033587)	KIAA1549L (ENSMNEG00000040724)	HIPK3 (ENSMNEG00000030400)	CSTF3 (ENSMNEG00000021807)	TCP11L1 (ENSMNEG00000034850)	DEPDC7 (ENSMNEG00000010538)	QSER1 (ENSMNEG00000038918)	PRRG4 (ENSMNEG00000035106)	CCDC73 (ENSMNEG00000037225)	EIF3M (ENSMNEG00000002856)
Rhinopithecus	DUPLICATION
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00390000015050.o.a #22
Golden snub-nosed monkey	MODERN SPECIES	3091																ENSRROG00000039512 #22	ENSRROG00000042793	PPM1B (ENSRROG00000045182)	SLC3A1 (ENSRROG00000028579)	PREPL (ENSRROG00000041940)	CAMKMT (ENSRROG00000030830)	SIX3 (ENSRROG00000042657)	SIX2 (ENSRROG00000043241)
Black snub-nosed monkey	MODERN SPECIES	2342						ZFP36L2 (ENSRBIG00000026428)	ENSRBIG00000035265	THADA (ENSRBIG00000028134)	PLEKHH2 (ENSRBIG00000035745)	C1GALT1C1L (ENSRBIG00000006561)	ENSRBIG00000041164	DYNC2LI1 (ENSRBIG00000031972)	ABCG5 (ENSRBIG00000039579)	ABCG8 (ENSRBIG00000024223)	LRPPRC (ENSRBIG00000031552)	ENSRBIG00000036556 #22	PPM1B (ENSRBIG00000037090)	SLC3A1 (ENSRBIG00000032035)	PREPL (ENSRBIG00000030291)	CAMKMT (ENSRBIG00000031044)	SIX3 (ENSRBIG00000031093)	SIX2 (ENSRBIG00000041429)	SRBD1 (ENSRBIG00000033486)	PRKCE (ENSRBIG00000043807)	EPAS1 (ENSRBIG00000032880)	TMEM247 (ENSRBIG00000044940)	ATP6V1E2 (ENSRBIG00000004827)	RHOQ (ENSRBIG00000026914)	PIGF (ENSRBIG00000037873)	ENSRBIG00000012594	ENSRBIG00000032105
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00390000015050.o.b #22
Golden snub-nosed monkey	MODERN SPECIES	3307																ENSRROG00000024842 #22	LYPD6 (ENSRROG00000032608) #23
Rhinopithecus	ANCESTRAL SPECIES	577														ENSGT00940000157541 #21	ENSGT00940000153201.j.k.b	ENSGT00390000015050.p #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29
Black snub-nosed monkey	MODERN SPECIES	619														RND3 (ENSRBIG00000029144) #21	ENSRBIG00000034465	ENSRBIG00000014354 #22	LYPD6 (ENSRBIG00000034039) #23	LYPD6B (ENSRBIG00000039136) #24	KIF5C (ENSRBIG00000037636) #25	EPC2 (ENSRBIG00000030738) #27
Laurasiatheria	ANCESTRAL SPECIES	12	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Laurasiatheria_a	ANCESTRAL SPECIES	16	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT01090000260806	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Laurasiatheria_b	ANCESTRAL SPECIES	16	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT01090000260806	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00910000147617
Carnivora	ANCESTRAL SPECIES	17	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT01090000260806	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00910000147617
Felidae	ANCESTRAL SPECIES	15	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.e #11	ENSGT00390000012204 #12	ENSGT01050000246169	ENSGT00910000144227.s.b	ENSGT00940000157201 #13	ENSGT01090000260806	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Panthera	ANCESTRAL SPECIES	9	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.e #11	ENSGT00390000012204 #12	ENSGT01050000246169	ENSGT00910000144227.s.b	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00910000147617
Panthera_a	ANCESTRAL SPECIES	6	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.e #11	ENSGT00390000012204 #12	ENSGT01050000246169	ENSGT00910000144227.s.b	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00940000159225.f	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
lion	DUPLICATION
lion	MODERN SPECIES	8	RPRM (ENSPLOG00000020616)	ARL6IP6 (ENSPLOG00000020626)	PRPF40A (ENSPLOG00000020664)	FMNL2 (ENSPLOG00000020750)	STAM2 (ENSPLOG00000020809) #8	CACNB4 (ENSPLOG00000020979) #9	ARL5A (ENSPLOG00000021319) #10	NEB (ENSPLOG00000021581) #11	RIF1 (ENSPLOG00000022230) #12	ENSPLOG00000022451	ENSPLOG00000022454	TNFAIP6 (ENSPLOG00000022459) #13	NMI (ENSPLOG00000022481) #15	RBM43 (ENSPLOG00000022483) #16	RND3 (ENSPLOG00000022487) #21	ENSPLOG00000022492 #22	LYPD6 (ENSPLOG00000022514) #23	LYPD6B (ENSPLOG00000022518) #24	KIF5C (ENSPLOG00000022528) #25	EPC2 (ENSPLOG00000022534) #27	MBD5 (ENSPLOG00000022542) #29	ENSPLOG00000022549	ORC4 (ENSPLOG00000022553) #30	ACVR2A (ENSPLOG00000004697) #32	ENSPLOG00000004702	ENSPLOG00000004716	ENSPLOG00000004721	ZEB2 (ENSPLOG00000004758) #33	GTDC1 (ENSPLOG00000004848) #34	ARHGAP15 (ENSPLOG00000004919) #36	KYNU (ENSPLOG00000004977) #37
lion	MODERN SPECIES	12	GALNT1 (ENSPLOG00000006888)	INO80C (ENSPLOG00000006836)	ENSPLOG00000006792	ZNF24 (ENSPLOG00000006764)	ENSPLOG00000006740	ZSCAN30 (ENSPLOG00000006718)	ZNF397 (ENSPLOG00000006695)	MAPRE2 (ENSPLOG00000006621) ##17	DTNA (ENSPLOG00000005942)	NOL4 (ENSPLOG00000005515)	ASXL3 (ENSPLOG00000005440)	CCDC178 (ENSPLOG00000005286)	KLHL14 (ENSPLOG00000005211)	GAREM1 (ENSPLOG00000005192)	MEP1B (ENSPLOG00000005140)	ENSPLOG00000005112 #22	ENSPLOG00000005088	RNF125 (ENSPLOG00000022389)	TRAPPC8 (ENSPLOG00000022330)	B4GALT6 (ENSPLOG00000022300)	TTR (ENSPLOG00000022283)	DSG2 (ENSPLOG00000022264)	DSG3 (ENSPLOG00000022243)	DSG4 (ENSPLOG00000022216)	DSG1 (ENSPLOG00000022177)	DSC1 (ENSPLOG00000022127)	DSC2 (ENSPLOG00000022065)	DSC3 (ENSPLOG00000022023)	ENSPLOG00000021994	CDH2 (ENSPLOG00000021952)	CHST9 (ENSPLOG00000021925)
leopard	DUPLICATION
leopard	MODERN SPECIES	1	ENSPPRG00000015709	FMNL2 (ENSPPRG00000002927)	ENSPPRG00000003451	STAM2 (ENSPPRG00000003557) #8	CACNB4 (ENSPPRG00000006549) #9	ARL5A (ENSPPRG00000008024) #10	NEB (ENSPPRG00000002959) #11	RIF1 (ENSPPRG00000003618) #12	ENSPPRG00000003817	ENSPPRG00000016498	TNFAIP6 (ENSPPRG00000004318) #13	NMI (ENSPPRG00000004590) #15	RBM43 (ENSPPRG00000005153) #16	RND3 (ENSPPRG00000007409) #21	ENSPPRG00000007620	ENSPPRG00000008539 #22	LYPD6 (ENSPPRG00000008921) #23	LYPD6B (ENSPPRG00000009609) #24	ENSPPRG00000009816	KIF5C (ENSPPRG00000009950) #25	EPC2 (ENSPPRG00000010357) #27	ENSPPRG00000016642 #27	MBD5 (ENSPPRG00000011397) #29	ORC4 (ENSPPRG00000012919) #30	ACVR2A (ENSPPRG00000013771) #32	ENSPPRG00000016836	ENSPPRG00000016855	ENSPPRG00000016894	ZEB2 (ENSPPRG00000023971) #33	GTDC1 (ENSPPRG00000002408) #34	ARHGAP15 (ENSPPRG00000003769) #36
leopard	MODERN SPECIES	56	COMMD10 (ENSPPRG00000009874)	ARL14EPL (ENSPPRG00000009493)	LVRN (ENSPPRG00000009237)	ENSPPRG00000008578	ATG12 (ENSPPRG00000008425)	CDO1 (ENSPPRG00000008000)	TMED7 (ENSPPRG00000007911)	TICAM2 (ENSPPRG00000016760)	ENSPPRG00000007561	FEM1C (ENSPPRG00000007481)	ENSPPRG00000007175	CCDC112 (ENSPPRG00000006736)	PGGT1B (ENSPPRG00000005679)	TRIM36 (ENSPPRG00000004286)	KCNN2 (ENSPPRG00000003196)	ENSPPRG00000001935 #22	ENSPPRG00000001834	YTHDC2 (ENSPPRG00000001595)	ENSPPRG00000000984	TMED9 (ENSPPRG00000000568)	B4GALT7 (ENSPPRG00000000505)	N4BP3 (ENSPPRG00000000242)	RMND5B (ENSPPRG00000000179)	NHP2 (ENSPPRG00000022505)	HNRNPAB (ENSPPRG00000020542)	PHYKPL (ENSPPRG00000015475)	COL23A1 (ENSPPRG00000014776)	CLK4 (ENSPPRG00000013000)	ZNF354A (ENSPPRG00000011698)	PROP1 (ENSPPRG00000011246)	ENSPPRG00000011161
Tiger	MODERN SPECIES	117	ARL6IP6 (ENSPTIG00000012359)	PRPF40A (ENSPTIG00000012673)	FMNL2 (ENSPTIG00000013843)	STAM2 (ENSPTIG00000014432) #8	CACNB4 (ENSPTIG00000014914) #9	ARL5A (ENSPTIG00000016763) #10	NEB (ENSPTIG00000017078) #11	RIF1 (ENSPTIG00000020652) #12	ENSPTIG00000005642	ENSPTIG00000005894	TNFAIP6 (ENSPTIG00000006051) #13	NMI (ENSPTIG00000006462) #15	RBM43 (ENSPTIG00000006727) #16	RND3 (ENSPTIG00000007120) #21	ENSPTIG00000007407	MMADHC (ENSPTIG00000007512) #22	LYPD6 (ENSPTIG00000007775) #23	LYPD6B (ENSPTIG00000008087) #24	KIF5C (ENSPTIG00000009064) #25	ENSPTIG00000010112	EPC2 (ENSPTIG00000010286) #27	MBD5 (ENSPTIG00000010964) #29	ORC4 (ENSPTIG00000011249) #30	ACVR2A (ENSPTIG00000011911) #32
Cat	MODERN SPECIES	239	PRPF40A (ENSFCAG00000005241)	FMNL2 (ENSFCAG00000005239)	ENSFCAG00000038415	STAM2 (ENSFCAG00000025382) #8	CACNB4 (ENSFCAG00000024935) #9	ARL5A (ENSFCAG00000014742) #10	ENSFCAG00000006778 #11	RIF1 (ENSFCAG00000029742) #12	ENSFCAG00000052372	ENSFCAG00000040752	TNFAIP6 (ENSFCAG00000027956) #13	ENSFCAG00000053166	NMI (ENSFCAG00000008426) #15	RBM43 (ENSFCAG00000046232) #16	RND3 (ENSFCAG00000023508) #21	MMADHC (ENSFCAG00000005210) #22	LYPD6 (ENSFCAG00000038369) #23	LYPD6B (ENSFCAG00000013261) #24	KIF5C (ENSFCAG00000025089) #25	EPC2 (ENSFCAG00000023979) #27	MBD5 (ENSFCAG00000028925) #29	ORC4 (ENSFCAG00000029890) #30	ACVR2A (ENSFCAG00000023845) #32	ENSFCAG00000037177	ENSFCAG00000022964	ZEB2 (ENSFCAG00000015532) #33	GTDC1 (ENSFCAG00000012314) #34	ARHGAP15 (ENSFCAG00000011613) #36	KYNU (ENSFCAG00000018501) #37	LRP1B (ENSFCAG00000026584)	NXPH2 (ENSFCAG00000039021)
Caniformia	ANCESTRAL SPECIES	14	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Canidae	ANCESTRAL SPECIES	56		ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00390000007539.i.b.a.db.b.b	ENSGT00940000157541 #21	ENSGT00390000009819.a.b.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Canis_lupus	ANCESTRAL SPECIES	46		ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00390000007539.i.b.a.db.b.b	ENSGT00940000157541 #21	ENSGT00390000009819.a.b.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00940000153430.a.b.m.b	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555
Dingo	MODERN SPECIES	101								ENSCAFG00020016414 #11	RIF1 (ENSCAFG00020016401) #12	TNFAIP6 (ENSCAFG00020016399) #13	NMI (ENSCAFG00020016395) #15	ENSCAFG00020016392	ENSCAFG00020016388	RND3 (ENSCAFG00020016386) #21	ENSCAFG00020016382	MMADHC (ENSCAFG00020016380) #22	LYPD6 (ENSCAFG00020016377) #23	ENSCAFG00020016375	ENSCAFG00020016369 #24	KIF5C (ENSCAFG00020016358) #25	ENSCAFG00020016356	EPC2 (ENSCAFG00020016353) #27	MBD5 (ENSCAFG00020016351) #29	ENSCAFG00020016350	ENSCAFG00020016348	ORC4 (ENSCAFG00020016340) #30	ACVR2A (ENSCAFG00020016337) #32	ZEB2 (ENSCAFG00020016311) #33	ENSCAFG00020016307	GTDC1 (ENSCAFG00020016302) #34	ARHGAP15 (ENSCAFG00020016269) #36
Dog	MODERN SPECIES	10			ENSCAFG00845011052	PRPF40A (ENSCAFG00845010834)	FMNL2 (ENSCAFG00845010696)	STAM2 (ENSCAFG00845010553) #8	CACNB4 (ENSCAFG00845010078) #9	ARL5A (ENSCAFG00845009827) #10	NEB (ENSCAFG00845009157) #11	RIF1 (ENSCAFG00845008561) #12	TNFAIP6 (ENSCAFG00845008460) #13	NMI (ENSCAFG00845008371) #15	ENSCAFG00845008302	RND3 (ENSCAFG00845008171) #21	ENSCAFG00845008096	MMADHC (ENSCAFG00845007815) #22	LYPD6 (ENSCAFG00845007742) #23	LYPD6B (ENSCAFG00845007654) #24	KIF5C (ENSCAFG00845007529) #25	ENSCAFG00845007463	EPC2 (ENSCAFG00845007263) #27	ENSCAFG00845007155	MBD5 (ENSCAFG00845006841) #29	ENSCAFG00845006609	ORC4 (ENSCAFG00845006436) #30	ACVR2A (ENSCAFG00845006266) #32	ZEB2 (ENSCAFG00845006084) #33	GTDC1 (ENSCAFG00845013883) #34	ARHGAP15 (ENSCAFG00845013638) #36	KYNU (ENSCAFG00845013520) #37	ENSCAFG00845013470
Red fox	MODERN SPECIES	68			PRPF40A (ENSVVUG00000020983)	FMNL2 (ENSVVUG00000014597)	STAM2 (ENSVVUG00000014345) #8	CACNB4 (ENSVVUG00000014341) #9	ARL5A (ENSVVUG00000014338) #10	ENSVVUG00000012589 #11	RIF1 (ENSVVUG00000011293) #12	TNFAIP6 (ENSVVUG00000011234) #13	NMI (ENSVVUG00000011210) #15	ENSVVUG00000011201	ENSVVUG00000011159	RND3 (ENSVVUG00000011125) #21	ENSVVUG00000011106	MMADHC (ENSVVUG00000011072) #22	LYPD6 (ENSVVUG00000011061) #23	LYPD6B (ENSVVUG00000011026) #24	KIF5C (ENSVVUG00000010993) #25	EPC2 (ENSVVUG00000010983) #27	MBD5 (ENSVVUG00000010972) #29	ORC4 (ENSVVUG00000010947) #30	ACVR2A (ENSVVUG00000010940) #32	ZEB2 (ENSVVUG00000010869) #33	ENSVVUG00000010866	GTDC1 (ENSVVUG00000010792) #34	ARHGAP15 (ENSVVUG00000010769) #36	KYNU (ENSVVUG00000010732) #37	ENSVVUG00000010703
Caniformia_b	ANCESTRAL SPECIES	13	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Ursidae	ANCESTRAL SPECIES	7	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000008783.ab.b	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Ursus	ANCESTRAL SPECIES	4	ENSGT00940000158904	ENSGT01030000235022	ENSGT00390000009987	ENSGT00950000185140	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29
Polar bear	MODERN SPECIES	142	ENSUMAG00000005367	ARL6IP6 (ENSUMAG00000005362)	ENSUMAG00000005352	PRPF40A (ENSUMAG00000004414)	FMNL2 (ENSUMAG00000003036)	STAM2 (ENSUMAG00000002864) #8	CACNB4 (ENSUMAG00000002493) #9	ARL5A (ENSUMAG00000002404) #10	NEB (ENSUMAG00000001360) #11	RIF1 (ENSUMAG00000000337) #12	ENSUMAG00000000262	TNFAIP6 (ENSUMAG00000000232) #13	NMI (ENSUMAG00000000174) #15	RBM43 (ENSUMAG00000000092) #16	RND3 (ENSUMAG00000020869) #21	MMADHC (ENSUMAG00000020859) #22	LYPD6 (ENSUMAG00000020846) #23	LYPD6B (ENSUMAG00000020839) #24	KIF5C (ENSUMAG00000020651) #25	EPC2 (ENSUMAG00000020641) #27	MBD5 (ENSUMAG00000020636) #29
American black bear	MODERN SPECIES	3990																MMADHC (ENSUAMG00000017107) #22
Giant Panda	MODERN SPECIES	11	LRP1B (ENSAMEG00000012450)	ENSAMEG00000012519	KYNU (ENSAMEG00000013126) #37	ARHGAP15 (ENSAMEG00000013114) #36	GTDC1 (ENSAMEG00000013100) #34	ENSAMEG00000028035	ZEB2 (ENSAMEG00000009337) #33	ACVR2A (ENSAMEG00000013434) #32	ORC4 (ENSAMEG00000013398) #30	MBD5 (ENSAMEG00000004750) #29	ENSAMEG00000019708	EPC2 (ENSAMEG00000004689) #27	KIF5C (ENSAMEG00000004598) #25	LYPD6B (ENSAMEG00000004593) #24	LYPD6 (ENSAMEG00000027368) #23	ENSAMEG00000006500 #22	RND3 (ENSAMEG00000025053) #21	ENSAMEG00000028408 #16	NMI (ENSAMEG00000013032) #15	TNFAIP6 (ENSAMEG00000013023) #13	RIF1 (ENSAMEG00000008461) #12	NEB (ENSAMEG00000008502) #11	ARL5A (ENSAMEG00000008735) #10	CACNB4 (ENSAMEG00000008758) #9	STAM2 (ENSAMEG00000008825) #8	FMNL2 (ENSAMEG00000017147)	PRPF40A (ENSAMEG00000017179)	RPRM (ENSAMEG00000019532)	GALNT13 (ENSAMEG00000005613)	ENSAMEG00000027036	KCNJ3 (ENSAMEG00000029906)
Mustelinae	ANCESTRAL SPECIES	21	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00510000055442	ENSGT00940000163732	ENSGT00390000013662	ENSGT00950000182944.B.a	ENSGT00950000182923.B.a	ENSGT00550000075086	ENSGT00940000158159	ENSGT00940000154030.a.a	ENSGT00530000063000.a.b.b	ENSGT00940000158447	ENSGT01090000260100.B	ENSGT00940000153476.a	ENSGT00940000158642	ENSGT00940000155098	ENSGT00900000141059
Ferret	MODERN SPECIES	173	GALNT13 (ENSMPUG00000000427)	RPRM (ENSMPUG00000019433)	ENSMPUG00000000415	PRPF40A (ENSMPUG00000000412)	FMNL2 (ENSMPUG00000000409)	STAM2 (ENSMPUG00000000404) #8	CACNB4 (ENSMPUG00000000400) #9	ARL5A (ENSMPUG00000000396) #10	NEB (ENSMPUG00000000376) #11	RIF1 (ENSMPUG00000000371) #12	TNFAIP6 (ENSMPUG00000000370) #13	NMI (ENSMPUG00000000344) #15	RBM43 (ENSMPUG00000000342) #16	RND3 (ENSMPUG00000000331) #21	ENSMPUG00000000330	MMADHC (ENSMPUG00000000323) #22	ENSMPUG00000000203	ENSMPUG00000000200	PDCD1 (ENSMPUG00000000197)	NEU4 (ENSMPUG00000000195)	GAL3ST2 (ENSMPUG00000000193)	D2HGDH (ENSMPUG00000000191)	ING5 (ENSMPUG00000000190)	DTYMK (ENSMPUG00000000189)	ATG4B (ENSMPUG00000000187)	THAP4 (ENSMPUG00000000182)	BOK (ENSMPUG00000000179)	ENSMPUG00000000178	STK25 (ENSMPUG00000000176)	FARP2 (ENSMPUG00000000175)	SEPTIN2 (ENSMPUG00000000166)
American mink	MODERN SPECIES	275																MMADHC (ENSNVIG00000020125) #22	ENSNVIG00000020114	ENSNVIG00000018582	FAM240C (ENSNVIG00000018529)	CB085 (ENSNVIG00000018518)	PDCD1 (ENSNVIG00000018495)	NEU4 (ENSNVIG00000018459)	GAL3ST2 (ENSNVIG00000018436)	D2HGDH (ENSNVIG00000018435)	ING5 (ENSNVIG00000018407)	DTYMK (ENSNVIG00000018398)	ATG4B (ENSNVIG00000018383)	ENSNVIG00000018363	ENSNVIG00000018353	BOK (ENSNVIG00000018340)	STK25 (ENSNVIG00000018289)
Laurasiatheria_c	ANCESTRAL SPECIES	18	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862
Equus	ANCESTRAL SPECIES	18	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01030000234916	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Horse	MODERN SPECIES	9	GALNT13 (ENSECAG00000007821)	RPRM (ENSECAG00000001246)	ARL6IP6 (ENSECAG00000007580)	PRPF40A (ENSECAG00000009113)	ENSECAG00000001048	FMNL2 (ENSECAG00000011111)	STAM2 (ENSECAG00000021355) #8	CACNB4 (ENSECAG00000056636) #9	ARL5A (ENSECAG00000023672) #10	NEB (ENSECAG00000020638) #11	RIF1 (ENSECAG00000012679) #12	TNFAIP6 (ENSECAG00000012104) #13	NMI (ENSECAG00000006801) #15	RBM43 (ENSECAG00000000566) #16	RND3 (ENSECAG00000021310) #21	MMADHC (ENSECAG00000014503) #22	LYPD6 (ENSECAG00000014321) #23	LYPD6B (ENSECAG00000013932) #24	KIF5C (ENSECAG00000013822) #25	EPC2 (ENSECAG00000010930) #27	ENSECAG00000008805	ENSECAG00000056446 ##18	ENSECAG00000055420	MBD5 (ENSECAG00000024839) #29	ORC4 (ENSECAG00000013910) #30	ACVR2A (ENSECAG00000000138) #32	ENSECAG00000039452	ZEB2 (ENSECAG00000019355) #33	GTDC1 (ENSECAG00000014136) #34	ARHGAP15 (ENSECAG00000012312) #36	KYNU (ENSECAG00000018188) #37
Donkey	MODERN SPECIES	24	GALNT13 (ENSEASG00005023315)	RPRM (ENSEASG00005023316)	ARL6IP6 (ENSEASG00005023320)	PRPF40A (ENSEASG00005023328)	FMNL2 (ENSEASG00005023341)	STAM2 (ENSEASG00005023344) #8	CACNB4 (ENSEASG00005023346) #9	ARL5A (ENSEASG00005023347) #10	ENSEASG00005023364 #11	ENSEASG00005038507 #11	RIF1 (ENSEASG00005023434) #12	TNFAIP6 (ENSEASG00005023439) #13	NMI (ENSEASG00005023440) #15	RBM43 (ENSEASG00005033269) #16	RND3 (ENSEASG00005038021) #21	MMADHC (ENSEASG00005023444) #22	LYPD6 (ENSEASG00005023445) #23	LYPD6B (ENSEASG00005032417) #24	KIF5C (ENSEASG00005023448) #25	EPC2 (ENSEASG00005023449) #27	MBD5 (ENSEASG00005023450) #29	ORC4 (ENSEASG00005023452) #30	ACVR2A (ENSEASG00005023453) #32	ENSEASG00005033216	ENSEASG00005023460	ENSEASG00005023463	ENSEASG00005024596	ZEB2 (ENSEASG00005030252) #33	GTDC1 (ENSEASG00005023470) #34	ARHGAP15 (ENSEASG00005023473) #36	KYNU (ENSEASG00005023479) #37
Chiroptera	ANCESTRAL SPECIES	11	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Megabat	MODERN SPECIES	1321																MMADHC (ENSPVAG00000008814) #22	LYPD6 (ENSPVAG00000008813) #23	LYPD6B (ENSPVAG00000008811) #24
Microchiroptera	ANCESTRAL SPECIES	15	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00910000147897	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Greater horseshoe bat	MODERN SPECIES	26	GALNT13 (ENSRFEG00010001100)	RPRM (ENSRFEG00010001141)	ARL6IP6 (ENSRFEG00010001173)	PRPF40A (ENSRFEG00010001279)	FMNL2 (ENSRFEG00010001562)	STAM2 (ENSRFEG00010001637) #8	CACNB4 (ENSRFEG00010001762) #9	ARL5A (ENSRFEG00010001991) #10	NEB (ENSRFEG00010003197) #11	RIF1 (ENSRFEG00010004943) #12	TNFAIP6 (ENSRFEG00010004979) #13	NMI (ENSRFEG00010004983) #15	RBM43 (ENSRFEG00010004990) #16	RND3 (ENSRFEG00010005000) #21	ENSRFEG00010005006	MMADHC (ENSRFEG00010005008) #22	LYPD6 (ENSRFEG00010005018) #23	ENSRFEG00010005025	LYPD6B (ENSRFEG00010005029) #24	KIF5C (ENSRFEG00010005056) #25	EPC2 (ENSRFEG00010005117) #27	MBD5 (ENSRFEG00010005157) #29	ORC4 (ENSRFEG00010005186) #30	ACVR2A (ENSRFEG00010005214) #32	ENSRFEG00010005235	ENSRFEG00010005242	ZEB2 (ENSRFEG00010005264) #33	ENSRFEG00010005283	GTDC1 (ENSRFEG00010005310) #34	ARHGAP15 (ENSRFEG00010005362) #36	KYNU (ENSRFEG00010005399) #37
Microbat	MODERN SPECIES	1175									NEB (ENSMLUG00000003393) #11	RIF1 (ENSMLUG00000003376) #12	TNFAIP6 (ENSMLUG00000028087) #13	NMI (ENSMLUG00000002734) #15	RBM43 (ENSMLUG00000002729) #16	RND3 (ENSMLUG00000014656) #21	ENSMLUG00000015279	MMADHC (ENSMLUG00000011495) #22	LYPD6 (ENSMLUG00000011480) #23
Artiodactyla	ANCESTRAL SPECIES	13	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT01090000260806	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862
Suina	ANCESTRAL SPECIES	48							ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT01090000260806	ENSGT00530000063686.a.a #15	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Chacoan peccary	MODERN SPECIES	130							STAM2 (ENSCWAG00000004723) #8	CACNB4 (ENSCWAG00000005063) #9	ARL5A (ENSCWAG00000015627) #10	NEB (ENSCWAG00000015808) #11	RIF1 (ENSCWAG00000017662) #12	TNFAIP6 (ENSCWAG00000017746) #13	ENSCWAG00000017775	NMI (ENSCWAG00000017794) #15	RND3 (ENSCWAG00000017833) #21	MMADHC (ENSCWAG00000017904) #22	LYPD6 (ENSCWAG00000017934) #23	LYPD6B (ENSCWAG00000017971) #24	KIF5C (ENSCWAG00000018100) #25	EPC2 (ENSCWAG00000018158) #27	MBD5 (ENSCWAG00000018269) #29	ORC4 (ENSCWAG00000018425) #30	ACVR2A (ENSCWAG00000018473) #32	ENSCWAG00000018510	ZEB2 (ENSCWAG00000018538) #33	ENSCWAG00000018682	GTDC1 (ENSCWAG00000018711) #34	ARHGAP15 (ENSCWAG00000018864) #36	KYNU (ENSCWAG00000018949) #37	LRP1B (ENSCWAG00000019047)	NXPH2 (ENSCWAG00000019401)
Pig	MODERN SPECIES	6			ENSSSCG00000043514	ENSSSCG00000032174	STAM2 (ENSSSCG00000016399) #8	CACNB4 (ENSSSCG00000029073) #9	ARL5A (ENSSSCG00000031541) #10	NEB (ENSSSCG00000016397) #11	RIF1 (ENSSSCG00000016395) #12	TNFAIP6 (ENSSSCG00000023716) #13	NMI (ENSSSCG00000022011) #15	ENSSSCG00000060497	ENSSSCG00000047930 #20	RND3 (ENSSSCG00000040445) #21	ENSSSCG00000050050	MMADHC (ENSSSCG00000028646) #22	LYPD6 (ENSSSCG00000023627) #23	LYPD6B (ENSSSCG00000015677) #24	KIF5C (ENSSSCG00000022919) #25	EPC2 (ENSSSCG00000027211) #27	MBD5 (ENSSSCG00000015667) #29	ORC4 (ENSSSCG00000015668) #30	ACVR2A (ENSSSCG00000015669) #32	ENSSSCG00000053606	ENSSSCG00000021343 #33	GTDC1 (ENSSSCG00000015670) #34	ARHGAP15 (ENSSSCG00000015671) #36	ENSSSCG00000043635	ENSSSCG00000052768	ENSSSCG00000045622	KYNU (ENSSSCG00000015673) #37
Artiodactyla_a	ANCESTRAL SPECIES	13	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Camelidae	ANCESTRAL SPECIES	16	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.k.a	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Arabian camel	MODERN SPECIES	31	ARL6IP6 (ENSCDRG00005001080)	PRPF40A (ENSCDRG00005000977)	ENSCDRG00005000923	ENSCDRG00005000883	STAM2 (ENSCDRG00005000826) #8	CACNB4 (ENSCDRG00005000236) #9	ENSCDRG00005000095 #10	NEB (ENSCDRG00005021457) #11	RIF1 (ENSCDRG00005021396) #12	TNFAIP6 (ENSCDRG00005021390) #13	ENSCDRG00005021387	NMI (ENSCDRG00005021380) #15	RBM43 (ENSCDRG00005021377) #16	RND3 (ENSCDRG00005021370) #21	ENSCDRG00005021367	MMADHC (ENSCDRG00005021361) #22	LYPD6 (ENSCDRG00005021357) #23	LYPD6B (ENSCDRG00005021351) #24	KIF5C (ENSCDRG00005021347) #25	EPC2 (ENSCDRG00005021337) #27	MBD5 (ENSCDRG00005021329) #29	ORC4 (ENSCDRG00005021323) #30	ACVR2A (ENSCDRG00005021318) #32	ENSCDRG00005021315	ENSCDRG00005021311	ZEB2 (ENSCDRG00005021107) #33	GTDC1 (ENSCDRG00005021037) #34	ARHGAP15 (ENSCDRG00005021017) #36	KYNU (ENSCDRG00005021006) #37	LRP1B (ENSCDRG00005019331)	NXPH2 (ENSCDRG00005019171)
Alpaca	MODERN SPECIES	4894															RND3 (ENSVPAG00000009769) #21	MMADHC (ENSVPAG00000009765) #22
Artiodactyla_b	ANCESTRAL SPECIES	12	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a
Cetacea	ANCESTRAL SPECIES	14	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.a #30	ENSGT00940000157233 #32	ENSGT00390000011401.ib	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Blue whale	MODERN SPECIES	18	GALNT13 (ENSBMSG00010005342)	RPRM (ENSBMSG00010005320)	ARL6IP6 (ENSBMSG00010005306)	PRPF40A (ENSBMSG00010005288)	FMNL2 (ENSBMSG00010005238)	STAM2 (ENSBMSG00010005180) #8	CACNB4 (ENSBMSG00010003258) #9	ARL5A (ENSBMSG00010002880) #10	NEB (ENSBMSG00010002643) #11	RIF1 (ENSBMSG00010002436) #12	ENSBMSG00010002399	TNFAIP6 (ENSBMSG00010002386) #13	NMI (ENSBMSG00010002366) #15	RBM43 (ENSBMSG00010002353) #16	RND3 (ENSBMSG00010002335) #21	MMADHC (ENSBMSG00010002313) #22	LYPD6 (ENSBMSG00010002294) #23	ENSBMSG00010002277 #25	EPC2 (ENSBMSG00010002250) #27	MBD5 (ENSBMSG00010002215) #29	ENSBMSG00010002178 #30	ACVR2A (ENSBMSG00010002163) #32	ENSBMSG00010002138	ENSBMSG00010002128	ENSBMSG00010002117 #33	ENSBMSG00010002099 #33	ENSBMSG00010002077	GTDC1 (ENSBMSG00010001738) #34	ARHGAP15 (ENSBMSG00010001671) #36	KYNU (ENSBMSG00010001637) #37	LRP1B (ENSBMSG00010001555)
Odontoceti	ANCESTRAL SPECIES	13	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.a #30	ENSGT00940000157233 #32	ENSGT00390000011401.ib	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Sperm whale	MODERN SPECIES	11	GALNT13 (ENSPCTG00005007385)	RPRM (ENSPCTG00005007360)	ARL6IP6 (ENSPCTG00005007339)	PRPF40A (ENSPCTG00005007224)	FMNL2 (ENSPCTG00005007168)	STAM2 (ENSPCTG00005007069) #8	CACNB4 (ENSPCTG00005003013) #9	ARL5A (ENSPCTG00005002661) #10	NEB (ENSPCTG00005002027) #11	RIF1 (ENSPCTG00005001703) #12	TNFAIP6 (ENSPCTG00005001643) #13	NMI (ENSPCTG00005001633) #15	RBM43 (ENSPCTG00005001620) #16	ENSPCTG00005001612	RND3 (ENSPCTG00005001596) #21	MMADHC (ENSPCTG00005001565) #22	LYPD6 (ENSPCTG00005001545) #23	LYPD6B (ENSPCTG00005001526) #24	KIF5C (ENSPCTG00005001462) #25	EPC2 (ENSPCTG00005001424) #27	MBD5 (ENSPCTG00005001400) #29	ORC4 (ENSPCTG00005001367) #30	ACVR2A (ENSPCTG00005001345) #32	ENSPCTG00005001332	ENSPCTG00005001317	ENSPCTG00005001311	ZEB2 (ENSPCTG00005001256) #33	ENSPCTG00005001214	GTDC1 (ENSPCTG00005001099) #34	ARHGAP15 (ENSPCTG00005001030) #36	KYNU (ENSPCTG00005000984) #37
Odontoceti_a	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987.m	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.a #30	ENSGT00940000157233 #32	ENSGT00390000011401.ib	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b
Odontoceti_b	ANCESTRAL SPECIES	12	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987.m	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00390000008496.j.b.a	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.a #30	ENSGT00940000157233 #32	ENSGT00900000143820	ENSGT00390000011401.ib	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37
Monodontidae	ANCESTRAL SPECIES	10	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987.m	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00390000008496.j.b.a	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.a #30	ENSGT00940000157233 #32	ENSGT00900000143820	ENSGT00390000011401.ib	ENSGT01020000230615	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37
Beluga whale	MODERN SPECIES	84	GALNT13 (ENSDLEG00000021650)	RPRM (ENSDLEG00000021644)	ENSDLEG00000021642	ARL6IP6 (ENSDLEG00000021640)	PRPF40A (ENSDLEG00000021630)	FMNL2 (ENSDLEG00000021565)	STAM2 (ENSDLEG00000021549) #8	CACNB4 (ENSDLEG00000021384) #9	ARL5A (ENSDLEG00000021351) #10	NEB (ENSDLEG00000018861) #11	RIF1 (ENSDLEG00000018312) #12	TNFAIP6 (ENSDLEG00000018296) #13	NMI (ENSDLEG00000018288) #15	RBM43 (ENSDLEG00000018283) #16	RND3 (ENSDLEG00000018265) #21	MMADHC (ENSDLEG00000018246) #22	LYPD6 (ENSDLEG00000018237) #23	ENSDLEG00000018220	LYPD6B (ENSDLEG00000018208) #24	KIF5C (ENSDLEG00000018081) #25	EPC2 (ENSDLEG00000018060) #27	MBD5 (ENSDLEG00000018041) #29	ORC4 (ENSDLEG00000017980) #30	ACVR2A (ENSDLEG00000017968) #32	ENSDLEG00000017961	ENSDLEG00000017945	ENSDLEG00000017936	ENSDLEG00000017923	ZEB2 (ENSDLEG00000017853) #33	ENSDLEG00000017836	GTDC1 (ENSDLEG00000017703) #34
Narwhal	MODERN SPECIES	302	RPRM (ENSMMNG00015008967)	ARL6IP6 (ENSMMNG00015008975)	PRPF40A (ENSMMNG00015008999)	FMNL2 (ENSMMNG00015009039)	STAM2 (ENSMMNG00015009058) #8	CACNB4 (ENSMMNG00015009337) #9	ARL5A (ENSMMNG00015009864) #10	NEB (ENSMMNG00015010017) #11	RIF1 (ENSMMNG00015010377) #12	ENSMMNG00015010504	TNFAIP6 (ENSMMNG00015010527) #13	NMI (ENSMMNG00015010557) #15	ENSMMNG00015010578 #16	ENSMMNG00015010594	RND3 (ENSMMNG00015010616) #21	MMADHC (ENSMMNG00015010638) #22	LYPD6 (ENSMMNG00015010654) #23	LYPD6B (ENSMMNG00015010676) #24	KIF5C (ENSMMNG00015010710) #25	EPC2 (ENSMMNG00015010756) #27	MBD5 (ENSMMNG00015010806) #29	ENSMMNG00015010860	ENSMMNG00015010890 #30	ACVR2A (ENSMMNG00015005198) #32	ENSMMNG00015005211	ENSMMNG00015005217	ENSMMNG00015005234	ENSMMNG00015005241	ZEB2 (ENSMMNG00015005275) #33	ENSMMNG00015005304	GTDC1 (ENSMMNG00015005348) #34
Vaquita	MODERN SPECIES	18	ENSPSNG00000006041	PRPF40A (ENSPSNG00000006077)	FMNL2 (ENSPSNG00000006149)	STAM2 (ENSPSNG00000006220) #8	CACNB4 (ENSPSNG00000007389) #9	ARL5A (ENSPSNG00000009575) #10	NEB (ENSPSNG00000012803) #11	RIF1 (ENSPSNG00000022170) #12	ENSPSNG00000022185	TNFAIP6 (ENSPSNG00000022198) #13	ENSPSNG00000022206	NMI (ENSPSNG00000022216) #15	RBM43 (ENSPSNG00000022227) #16	RND3 (ENSPSNG00000022239) #21	ENSPSNG00000022249	MMADHC (ENSPSNG00000022255) #22	LYPD6 (ENSPSNG00000022268) #23	ENSPSNG00000022273	LYPD6B (ENSPSNG00000022285) #24	KIF5C (ENSPSNG00000022304) #25	EPC2 (ENSPSNG00000022315) #27	MBD5 (ENSPSNG00000022326) #29	ENSPSNG00000022333	ENSPSNG00000009867 #30	ACVR2A (ENSPSNG00000010003) #32	ENSPSNG00000010077	ENSPSNG00000010130	ENSPSNG00000010148	ZEB2 (ENSPSNG00000010233) #33	GTDC1 (ENSPSNG00000010572) #34	ARHGAP15 (ENSPSNG00000010851) #36
Dolphin	MODERN SPECIES	3858																MMADHC (ENSTTRG00000013657) #22
Pecora	ANCESTRAL SPECIES	24	ENSGT00940000158904	ENSGT00940000160209.e	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Yarkand deer	MODERN SPECIES	26	ENSCHYG00000022588	ARL6IP6 (ENSCHYG00000022617)	PRPF40A (ENSCHYG00000022725)	FMNL2 (ENSCHYG00000023162)	ENSCHYG00000023717	STAM2 (ENSCHYG00000023731) #8	CACNB4 (ENSCHYG00000023861) #9	ARL5A (ENSCHYG00000024878) #10	NEB (ENSCHYG00000024952) #11	RIF1 (ENSCHYG00000025435) #12	TNFAIP6 (ENSCHYG00000025495) #13	NMI (ENSCHYG00000025513) #15	RBM43 (ENSCHYG00000025543) #16	ENSCHYG00000025571	RND3 (ENSCHYG00000025578) #21	MMADHC (ENSCHYG00000025604) #22	ENSCHYG00000025627 #23	LYPD6B (ENSCHYG00000025655) #24	KIF5C (ENSCHYG00000008710) #25	EPC2 (ENSCHYG00000008812) #27	MBD5 (ENSCHYG00000009045) #29	ORC4 (ENSCHYG00000009235) #30	ACVR2A (ENSCHYG00000009478) #32	ENSCHYG00000009591	ZEB2 (ENSCHYG00000009791) #33	GTDC1 (ENSCHYG00000010152) #34	ARHGAP15 (ENSCHYG00000010616) #36	KYNU (ENSCHYG00000010703) #37	LRP1B (ENSCHYG00000010870)	ENSCHYG00000011576	NXPH2 (ENSCHYG00000011648)
Percora_a	ANCESTRAL SPECIES	5	ENSGT00940000158904	ENSGT00940000160209.e	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555
Siberian musk deer	MODERN SPECIES	346	GALNT13 (ENSMMSG00000004530)	RPRM (ENSMMSG00000004641)	ARL6IP6 (ENSMMSG00000004675)	PRPF40A (ENSMMSG00000004797)	FMNL2 (ENSMMSG00000005210)	STAM2 (ENSMMSG00000005295) #8	CACNB4 (ENSMMSG00000005906) #9	ARL5A (ENSMMSG00000016042) #10	NEB (ENSMMSG00000016236) #11	RIF1 (ENSMMSG00000017985) #12	TNFAIP6 (ENSMMSG00000018393) #13	NMI (ENSMMSG00000018423) #15	RBM43 (ENSMMSG00000018455) #16	ENSMMSG00000018486	RND3 (ENSMMSG00000018506) #21	MMADHC (ENSMMSG00000018547) #22	LYPD6 (ENSMMSG00000018611) #23	LYPD6B (ENSMMSG00000018636) #24	KIF5C (ENSMMSG00000018662) #25	EPC2 (ENSMMSG00000018790) #27	ENSMMSG00000018886	MBD5 (ENSMMSG00000019026) #29	ENSMMSG00000019093	ORC4 (ENSMMSG00000019167) #30	ACVR2A (ENSMMSG00000019227) #32	ENSMMSG00000019266	ENSMMSG00000019276	ENSMMSG00000019314	ZEB2 (ENSMMSG00000019357) #33	ENSMMSG00000019525	GTDC1 (ENSMMSG00000019550) #34
Bovidae	ANCESTRAL SPECIES	8	ENSGT00940000158904	ENSGT00940000160209.e	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555	ENSGT00940000153272.a.b.z.a.a.a.b
Caprinae	ANCESTRAL SPECIES	5	ENSGT00940000171318	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541.c #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00900000141555	ENSGT00940000153272.a.b.z.a.a.a.b
Goat	MODERN SPECIES	11	PRPF40A (ENSCHIG00000011660)	FMNL2 (ENSCHIG00000026934)	ENSCHIG00000010047	STAM2 (ENSCHIG00000020598) #8	ENSCHIG00000022060	CACNB4 (ENSCHIG00000013367) #9	ARL5A (ENSCHIG00000025329) #10	NEB (ENSCHIG00000014281) #11	RIF1 (ENSCHIG00000020327) #12	TNFAIP6 (ENSCHIG00000013151) #13	NMI (ENSCHIG00000025341) #15	RBM43 (ENSCHIG00000019526) #16	RND3 (ENSCHIG00000022258) #21	ENSCHIG00000010348	ENSCHIG00000020042	MMADHC (ENSCHIG00000026029) #22	LYPD6 (ENSCHIG00000018947) #23	ENSCHIG00000026876	LYPD6B (ENSCHIG00000014675) #24	KIF5C (ENSCHIG00000012226) #25	EPC2 (ENSCHIG00000024313) #27	MBD5 (ENSCHIG00000008638) #29	ORC4 (ENSCHIG00000023781) #30	ACVR2A (ENSCHIG00000013353) #32	ENSCHIG00000026414	ENSCHIG00000012606	ZEB2 (ENSCHIG00000020961) #33	GTDC1 (ENSCHIG00000022649) #34	ARHGAP15 (ENSCHIG00000014079) #36	ENSCHIG00000024301 #36	KYNU (ENSCHIG00000025717) #37
Rambouillet Sheep	MODERN SPECIES	11	ARL6IP6 (ENSOARG00020022563)	PRPF40A (ENSOARG00020022598)	FMNL2 (ENSOARG00020023016)	ENSOARG00020023393	STAM2 (ENSOARG00020023418) #8	CACNB4 (ENSOARG00020023560) #9	ARL5A (ENSOARG00020024180) #10	NEB (ENSOARG00020024247) #11	RIF1 (ENSOARG00020024396) #12	TNFAIP6 (ENSOARG00020024645) #13	NMI (ENSOARG00020024663) #15	RBM43 (ENSOARG00020024693) #16	ENSOARG00020024716 #21	ENSOARG00020024723	RND3 (ENSOARG00020024731) #21	MMADHC (ENSOARG00020024756) #22	LYPD6 (ENSOARG00020024772) #23	LYPD6B (ENSOARG00020024784) #24	KIF5C (ENSOARG00020024809) #25	EPC2 (ENSOARG00020024888) #27	MBD5 (ENSOARG00020024911) #29	ORC4 (ENSOARG00020024976) #30	ACVR2A (ENSOARG00020025027) #32	ZEB2 (ENSOARG00020025087) #33	ARHGAP15 (ENSOARG00020025262) #36	KYNU (ENSOARG00020005939) #37	LRP1B (ENSOARG00020006148)	ENSOARG00020011176	NXPH2 (ENSOARG00020011226)	SPOPL (ENSOARG00020011256)	ENSOARG00020011354
Bovinae	ANCESTRAL SPECIES	5	ENSGT00940000160209.e	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00390000018085.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01100000264677	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00510000047245.w.a.b	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
American bison	MODERN SPECIES	3062	ENSBBBG00000013139	ARL6IP6 (ENSBBBG00000013147)	PRPF40A (ENSBBBG00000013168)	ENSBBBG00000002660	ENSBBBG00000007404	STAM2 (ENSBBBG00000013190) #8	CACNB4 (ENSBBBG00000014165) #9	ARL5A (ENSBBBG00000014197) #10	ENSBBBG00000014203	NEB (ENSBBBG00000003376) #11	RIF1 (ENSBBBG00000014704) #12	TNFAIP6 (ENSBBBG00000014725) #13	NMI (ENSBBBG00000014748) #15	RBM43 (ENSBBBG00000014755) #16	RND3 (ENSBBBG00000014767) #21	MMADHC (ENSBBBG00000007940) #22	LYPD6 (ENSBBBG00000003640) #23	LYPD6B (ENSBBBG00000014801) #24	KIF5C (ENSBBBG00000014835) #25	EPC2 (ENSBBBG00000003658) #27	MBD5 (ENSBBBG00000002808) #29	ENSBBBG00000014898	ORC4 (ENSBBBG00000001184) #30	ACVR2A (ENSBBBG00000001138) #32	ENSBBBG00000001115	ENSBBBG00000001101
Bos	ANCESTRAL SPECIES	6	ENSGT00390000010523.c.b	ENSGT00390000007818.e.b.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00390000018085.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01100000264677	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00510000047245.w.a.b	ENSGT00940000154940.fb.b	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862
Bos_b	ANCESTRAL SPECIES	3	ENSGT00940000160209.e	ENSGT00390000010523.c.b	ENSGT00390000007818.e.b.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01100000264677	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00510000047245.w.a.b	ENSGT00940000154940.fb.b	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000154276.jb.a.a.a.a.a.a.b.a.a.b.b
Cow	MODERN SPECIES	11	RPRM (ENSBTAG00000021526)	ENSBTAG00000033143	ARL6IP6 (ENSBTAG00000001435)	ENSBTAG00000047365	PRPF40A (ENSBTAG00000048151)	FMNL2 (ENSBTAG00000026851)	STAM2 (ENSBTAG00000001887) #8	CACNB4 (ENSBTAG00000002297) #9	ARL5A (ENSBTAG00000002293) #10	NEB (ENSBTAG00000006907) #11	RIF1 (ENSBTAG00000021020) #12	TNFAIP6 (ENSBTAG00000007239) #13	NMI (ENSBTAG00000032369) #15	RBM43 (ENSBTAG00000016217) #16	RND3 (ENSBTAG00000039731) #21	MMADHC (ENSBTAG00000015962) #22	LYPD6 (ENSBTAG00000047426) #23	LYPD6B (ENSBTAG00000019683) #24	KIF5C (ENSBTAG00000018125) #25	EPC2 (ENSBTAG00000018581) #27	MBD5 (ENSBTAG00000019592) #29	PTMA (ENSBTAG00000051947)	ORC4 (ENSBTAG00000015291) #30	ACVR2A (ENSBTAG00000018114) #32	ENSBTAG00000012376	ENSBTAG00000054108	ZEB2 (ENSBTAG00000048810) #33	ZEB2 (ENSBTAG00000012615) #33	GTDC1 (ENSBTAG00000001132) #34	ENSBTAG00000050589 #34	ARHGAP15 (ENSBTAG00000032289) #36
Hybrid Bos Indicus	MODERN SPECIES	11	GALNT13 (ENSBIXG00005019576)	RPRM (ENSBIXG00005019467)	ENSBIXG00005019449	ARL6IP6 (ENSBIXG00005003165)	PRPF40A (ENSBIXG00005005862)	FMNL2 (ENSBIXG00005019262)	STAM2 (ENSBIXG00005019037) #8	CACNB4 (ENSBIXG00005003080) #9	ARL5A (ENSBIXG00005002986) #10	NEB (ENSBIXG00005018305) #11	RIF1 (ENSBIXG00005018091) #12	TNFAIP6 (ENSBIXG00005017934) #13	NMI (ENSBIXG00005017903) #15	RBM43 (ENSBIXG00005017876) #16	RND3 (ENSBIXG00005017847) #21	MMADHC (ENSBIXG00005017782) #22	LYPD6 (ENSBIXG00005017744) #23	LYPD6B (ENSBIXG00005017688) #24	KIF5C (ENSBIXG00005017619) #25	EPC2 (ENSBIXG00005017562) #27	MBD5 (ENSBIXG00005017469) #29	ENSBIXG00005017400	ENSBIXG00005017396	ENSBIXG00005005733	ORC4 (ENSBIXG00005017338) #30	ACVR2A (ENSBIXG00005002803) #32	ENSBIXG00005017172	ENSBIXG00005002793	ZEB2 (ENSBIXG00005017016) #33	GTDC1 (ENSBIXG00005016592) #34	ARHGAP15 (ENSBIXG00005016328) #36
Bos_a	ANCESTRAL SPECIES	4	ENSGT00390000010523.c.b	ENSGT00390000007818.e.b.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b.l	ENSGT00390000018085.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00940000154940.fb.b	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00940000153272.a.b.z.a.a.a.b
Domestic yak	MODERN SPECIES	11	PRPF40A (ENSBGRG00000015929)	FMNL2 (ENSBGRG00000015350)	STAM2 (ENSBGRG00000015223) #8	CACNB4 (ENSBGRG00000008687) #9	ARL5A (ENSBGRG00000008374) #10	ENSBGRG00000008336	NEB (ENSBGRG00000006143) #11	RIF1 (ENSBGRG00000005974) #12	TNFAIP6 (ENSBGRG00000005909) #13	ENSBGRG00000005896	NMI (ENSBGRG00000005853) #15	ENSBGRG00000005845	RBM43 (ENSBGRG00000005796) #16	FAM98B (ENSBGRG00000005761)	RND3 (ENSBGRG00000005710) #21	MMADHC (ENSBGRG00000005641) #22	LYPD6 (ENSBGRG00000005614) #23	LYPD6B (ENSBGRG00000005574) #24	ENSBGRG00000005565	KIF5C (ENSBGRG00000005336) #25	EPC2 (ENSBGRG00000005242) #27	MBD5 (ENSBGRG00000005195) #29	ENSBGRG00000005171	ORC4 (ENSBGRG00000005070) #30	ACVR2A (ENSBGRG00000004989) #32	ENSBGRG00000004949	ZEB2 (ENSBGRG00000004703) #33	GTDC1 (ENSBGRG00000004374) #34	ENSBGRG00000004340	ARHGAP15 (ENSBGRG00000004300) #36	KYNU (ENSBGRG00000004206) #37
Wild yak	MODERN SPECIES	696													ENSBMUG00000003839	RND3 (ENSBMUG00000003872) #21	ENSBMUG00000003887	MMADHC (ENSBMUG00000003907) #22	LYPD6 (ENSBMUG00000003931) #23	LYPD6B (ENSBMUG00000003956) #24	ENSBMUG00000003968	KIF5C (ENSBMUG00000004035) #25	EPC2 (ENSBMUG00000004075) #27	MBD5 (ENSBMUG00000004107) #29
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00390000015050 #22
Common shrew	MODERN SPECIES	4923																MMADHC (ENSSARG00000009986) #22
Hedgehog	MODERN SPECIES	14846																MMADHC (ENSEEUG00000003792) #22
Atlantogenata	ANCESTRAL SPECIES	9	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Xenarthra	ANCESTRAL SPECIES	1007																ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27
Sloth	MODERN SPECIES	5619																MMADHC (ENSCHOG00000008067) #22
Armadillo	MODERN SPECIES	1909																MMADHC (ENSDNOG00000035365) #22	LYPD6 (ENSDNOG00000049622) #23	ENSDNOG00000038256	ENSDNOG00000046995	LYPD6B (ENSDNOG00000043417) #24	KIF5C (ENSDNOG00000003867) #25	EPC2 (ENSDNOG00000011439) #27
Afrotheria	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Afrotheria_a	ANCESTRAL SPECIES	1	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953
Elephant	MODERN SPECIES	301	KCNJ3 (ENSLAFG00000022282)	GALNT13 (ENSLAFG00000005947)	RPRM (ENSLAFG00000001386)	ARL6IP6 (ENSLAFG00000001616)	PRPF40A (ENSLAFG00000001613)	FMNL2 (ENSLAFG00000001605)	STAM2 (ENSLAFG00000009848) #8	CACNB4 (ENSLAFG00000009844) #9	ARL5A (ENSLAFG00000032104) #10	NEB (ENSLAFG00000009810) #11	RIF1 (ENSLAFG00000009796) #12	TNFAIP6 (ENSLAFG00000009790) #13	NMI (ENSLAFG00000012842) #15	RBM43 (ENSLAFG00000010512) #16	RND3 (ENSLAFG00000010712) #21	MMADHC (ENSLAFG00000016977) #22	LYPD6 (ENSLAFG00000014710) #23	LYPD6B (ENSLAFG00000007340) #24	KIF5C (ENSLAFG00000005632) #25	EPC2 (ENSLAFG00000014312) #27	ENSLAFG00000001900 #29	ENSLAFG00000030020 #29	ORC4 (ENSLAFG00000002631) #30	ACVR2A (ENSLAFG00000002628) #32	ENSLAFG00000032780	ZEB2 (ENSLAFG00000008960) #33	GTDC1 (ENSLAFG00000010261) #34	ARHGAP15 (ENSLAFG00000006748) #36	KYNU (ENSLAFG00000002172) #37	ENSLAFG00000029177	LRP1B (ENSLAFG00000014282)
Hyrax	MODERN SPECIES	10385																MMADHC (ENSPCAG00000014195) #22
Tenrec	MODERN SPECIES	13686																MMADHC (ENSETEG00000013338) #22
Marsupialia	ANCESTRAL SPECIES	5	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00390000017405.j	ENSGT00940000166136
Marsupialia_b	ANCESTRAL SPECIES	3	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000012235	ENSGT00390000011174	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00670000099436	ENSGT00950000183061.a.a.b	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b
Diprotodontia	ANCESTRAL SPECIES	11	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000012235	ENSGT00390000011174	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00670000099436	ENSGT00950000183061.a.a.b	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b
Diprotodontia_a	ANCESTRAL SPECIES	9	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000012235	ENSGT00390000011174	ENSGT00390000016050	ENSGT00940000154956	ENSGT00940000154934.B	ENSGT01050000244827.C.c.a.b	ENSGT00550000075006	ENSGT00670000099436	ENSGT00950000183061.a.a.b	ENSGT00940000157614	ENSGT00940000157257	ENSGT00940000161440	ENSGT00940000161564	ENSGT00390000003602	ENSGT00390000012305.b
Common wonbat	MODERN SPECIES	1049								CACNB4 (ENSVURG00010017478) #9	ARL5A (ENSVURG00010019249) #10	NEB (ENSVURG00010019306) #11	RIF1 (ENSVURG00010019510) #12	TNFAIP6 (ENSVURG00010019533) #13	NMI (ENSVURG00010019539) #15	ENSVURG00010019544 #16	RND3 (ENSVURG00010019553) #21	MMADHC (ENSVURG00010019562) #22	SPART (ENSVURG00010019598)	ENSVURG00010019614	ENSVURG00010019621	DCLK1 (ENSVURG00010019643)	ENSVURG00010019677	NBEA (ENSVURG00010019712)	MAB21L1 (ENSVURG00010019759)	ENSVURG00010019764	RFC3 (ENSVURG00010019770)	ENSVURG00010019790	STARD13 (ENSVURG00010019796)	KL (ENSVURG00010019815)	PDS5B (ENSVURG00010019844)	ENSVURG00010019875	ENSVURG00010019878
koala	MODERN SPECIES	203	ENSPCIG00000035350	ARL6IP6 (ENSPCIG00000004934)	PRPF40A (ENSPCIG00000004943)	FMNL2 (ENSPCIG00000004973)	ENSPCIG00000028317	STAM2 (ENSPCIG00000001302) #8	CACNB4 (ENSPCIG00000011289) #9	ARL5A (ENSPCIG00000005040) #10	NEB (ENSPCIG00000005793) #11	RIF1 (ENSPCIG00000009185) #12	TNFAIP6 (ENSPCIG00000009192) #13	ENSPCIG00000020144 #15	ENSPCIG00000020142 #16	RND3 (ENSPCIG00000016721) #21	ENSPCIG00000033780	MMADHC (ENSPCIG00000031048) #22
Tasmanian devil	MODERN SPECIES	2	KCNJ3 (ENSSHAG00000032170)	GALNT13 (ENSSHAG00000031696)	RPRM (ENSSHAG00000025986)	ARL6IP6 (ENSSHAG00000028317)	PRPF40A (ENSSHAG00000009029)	FMNL2 (ENSSHAG00000005004)	STAM2 (ENSSHAG00000029280) #8	CACNB4 (ENSSHAG00000026802) #9	NEB (ENSSHAG00000018591) #11	RIF1 (ENSSHAG00000018552) #12	TNFAIP6 (ENSSHAG00000022583) #13	NMI (ENSSHAG00000018439) #15	ENSSHAG00000026547 #16	ENSSHAG00000022458	ENSSHAG00000017174 #21	ENSSHAG00000014382 #22	ENSSHAG00000013973	CCDC169 (ENSSHAG00000013972)	SOHLH2 (ENSSHAG00000013234)	DCLK1 (ENSSHAG00000010588)	NBEA (ENSSHAG00000001274)	MAB21L1 (ENSSHAG00000028852)	RFC3 (ENSSHAG00000012696)	STARD13 (ENSSHAG00000006090)	KL (ENSSHAG00000004604)	ENSSHAG00000030187	PDS5B (ENSSHAG00000012281)	ENSSHAG00000011360	ENSSHAG00000027940	ENSSHAG00000010421	ZAR1L (ENSSHAG00000008288)
Opossum	MODERN SPECIES	3	RPRM (ENSMODG00000044197)	ARL6IP6 (ENSMODG00000004186)	PRPF40A (ENSMODG00000004179)	FMNL2 (ENSMODG00000004138)	STAM2 (ENSMODG00000004047) #8	CACNB4 (ENSMODG00000004006) #9	ARL5A (ENSMODG00000003978) #10	ENSMODG00000047668 #11	ENSMODG00000003935 #11	RIF1 (ENSMODG00000003703) #12	TNFAIP6 (ENSMODG00000003606) #13	ENSMODG00000003594 #15	ENSMODG00000003581 #16	RND3 (ENSMODG00000003575) #21	ENSMODG00000043542	MMADHC (ENSMODG00000003566) #22	ENSMODG00000003546	LYPD6 (ENSMODG00000003553) #23	LYPD6B (ENSMODG00000048295) #24	ENSMODG00000039281	KIF5C (ENSMODG00000003526) #25	EPC2 (ENSMODG00000003447) #27	MBD5 (ENSMODG00000003415) #29	ORC4 (ENSMODG00000003327) #30	ACVR2A (ENSMODG00000003295) #32	ENSMODG00000038179	ZEB2 (ENSMODG00000003112) #33	ENSMODG00000039463	GTDC1 (ENSMODG00000003084) #34	ARHGAP15 (ENSMODG00000003016) #36	KYNU (ENSMODG00000002997) #37
Platypus	MODERN SPECIES	20	GPD2 (ENSOANG00000006122)	NR4A2 (ENSOANG00000006120)	KCNJ3 (ENSOANG00000038534)	GALNT13 (ENSOANG00000006116)	ARL6IP6 (ENSOANG00000044701)	PRPF40A (ENSOANG00000006113)	FMNL2 (ENSOANG00000006108)	STAM2 (ENSOANG00000012041) #8	CACNB4 (ENSOANG00000006106) #9	ARL5A (ENSOANG00000046299) #10	NEB (ENSOANG00000006081) #11	RIF1 (ENSOANG00000006078) #12	TNFAIP6 (ENSOANG00000037517) #13	ENSOANG00000006075 #15	RND3 (ENSOANG00000038274) #21	MMADHC (ENSOANG00000006072) #22	LYPD6 (ENSOANG00000043367) #23	LYPD6B (ENSOANG00000042916) #24	KIF5C (ENSOANG00000011829) #25	EPC2 (ENSOANG00000006066) #27	ENSOANG00000044970 #29	ENSOANG00000040740 #29	ENSOANG00000050510	ORC4 (ENSOANG00000008383) #30	ACVR2A (ENSOANG00000008384) #32	ZEB2 (ENSOANG00000011947) #33	GTDC1 (ENSOANG00000011982) #34	ARHGAP15 (ENSOANG00000011983) #36	KYNU (ENSOANG00000045440) #37	LRP1B (ENSOANG00000007998)	NXPH2 (ENSOANG00000007997)
Sauria	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01000000220430	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00900000142862
Archelosauria	ANCESTRAL SPECIES	8	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555
Archosauria	ANCESTRAL SPECIES	6	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555
Aves	ANCESTRAL SPECIES	8	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555
Neognathae	ANCESTRAL SPECIES	6	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555
Neognathae_b	ANCESTRAL SPECIES	7	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00960000189410
Passeriformes	ANCESTRAL SPECIES	6	ENSGT01080000257365.b.a.a.b.a.a	ENSGT01080000257365.b.a.a.b.a.b	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00960000189410
Great tit	MODERN SPECIES	27	ENSPMJG00000004541	KCNJ3 (ENSPMJG00000004535)	GALNT13 (ENSPMJG00000004522)	ENSPMJG00000004518	PRPF40A (ENSPMJG00000002878)	FMNL2 (ENSPMJG00000000755)	STAM2 (ENSPMJG00000000177) #8	CACNB4 (ENSPMJG00000000088) #9	ARL5A (ENSPMJG00000000061) #10	NEB (ENSPMJG00000020007) #11	RIF1 (ENSPMJG00000020006) #12	TNFAIP6 (ENSPMJG00000020005) #13	NMI (ENSPMJG00000020004) #15	RBM43 (ENSPMJG00000020003) #16	RND3 (ENSPMJG00000020001) #21	MMADHC (ENSPMJG00000020000) #22	LYPD6 (ENSPMJG00000019999) #23	LYPD6B (ENSPMJG00000019998) #24	KIF5C (ENSPMJG00000019997) #25	EPC2 (ENSPMJG00000019996) #27	MBD5 (ENSPMJG00000019995) #29	ORC4 (ENSPMJG00000019994) #30	ACVR2A (ENSPMJG00000019993) #32	ZEB2 (ENSPMJG00000019972) #33	GTDC1 (ENSPMJG00000019971) #34	ARHGAP15 (ENSPMJG00000019970) #36	KYNU (ENSPMJG00000019969) #37	ENSPMJG00000019968	LRP1B (ENSPMJG00000019966)	ENSPMJG00000019964	ENSPMJG00000019963
Passeriformes_d	ANCESTRAL SPECIES	8	ENSGT01080000257365.b.a.a.b.a.a	ENSGT01080000257365.b.a.a.b.a.b	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00960000189410
Flycatcher	MODERN SPECIES	26	KCNJ3 (ENSFALG00000013952)	GALNT13 (ENSFALG00000013944)	RPRM (ENSFALG00000027840)	PRPF40A (ENSFALG00000013930)	ENSFALG00000025688	FMNL2 (ENSFALG00000013923)	STAM2 (ENSFALG00000013920) #8	CACNB4 (ENSFALG00000013909) #9	ARL5A (ENSFALG00000023620) #10	NEB (ENSFALG00000013894) #11	RIF1 (ENSFALG00000013874) #12	TNFAIP6 (ENSFALG00000013873) #13	NMI (ENSFALG00000013870) #15	RBM43 (ENSFALG00000013867) #16	RND3 (ENSFALG00000013866) #21	MMADHC (ENSFALG00000023718) #22	LYPD6 (ENSFALG00000027300) #23	LYPD6B (ENSFALG00000013863) #24	KIF5C (ENSFALG00000024506) #25	ENSFALG00000028125 #29	ENSFALG00000013858 #29	ORC4 (ENSFALG00000013856) #30	ACVR2A (ENSFALG00000013851) #32	ZEB2 (ENSFALG00000013846) #33	GTDC1 (ENSFALG00000013845) #34	ARHGAP15 (ENSFALG00000013843) #36	KYNU (ENSFALG00000013835) #37	ENSFALG00000027773	LRP1B (ENSFALG00000013809)	ENSFALG00000027337	ENSFALG00000025359
Passeriformes_g	ANCESTRAL SPECIES	9	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a.b	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.h #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00960000189410
Passeroidea	ANCESTRAL SPECIES	8	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a.b	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.h #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00900000143214	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00960000189410
Common canary	MODERN SPECIES	8	ENSSCAG00000004822	ENSSCAG00000004826	PRPF40A (ENSSCAG00000004834)	FMNL2 (ENSSCAG00000004864)	STAM2 (ENSSCAG00000004872) #8	CACNB4 (ENSSCAG00000004889) #9	ARL5A (ENSSCAG00000004911) #10	NEB (ENSSCAG00000005308) #11	RIF1 (ENSSCAG00000007793) #12	TNFAIP6 (ENSSCAG00000008054) #13	NMI (ENSSCAG00000008060) #15	RBM43 (ENSSCAG00000008064) #16	ENSSCAG00000008066	RND3 (ENSSCAG00000008070) #21	ENSSCAG00000008077	MMADHC (ENSSCAG00000008081) #22	LYPD6 (ENSSCAG00000008089) #23	ENSSCAG00000008098	LYPD6B (ENSSCAG00000008103) #24	KIF5C (ENSSCAG00000008117) #25	EPC2 (ENSSCAG00000008145) #27	MBD5 (ENSSCAG00000008168) #29	ORC4 (ENSSCAG00000008247) #30	ACVR2A (ENSSCAG00000008262) #32	ZEB2 (ENSSCAG00000008306) #33	ENSSCAG00000008312	GTDC1 (ENSSCAG00000008330) #34	ARHGAP15 (ENSSCAG00000008352) #36	KYNU (ENSSCAG00000008360) #37	LRP1B (ENSSCAG00000008544)	ENSSCAG00000009974
Zebra finch	MODERN SPECIES	29	GALNT13 (ENSTGUG00000012138)	RPRM (ENSTGUG00000024849)	PRPF40A (ENSTGUG00000012118)	FMNL2 (ENSTGUG00000012102)	STAM2 (ENSTGUG00000012089) #8	ENSTGUG00000024126	CACNB4 (ENSTGUG00000025861) #9	ARL5A (ENSTGUG00000024176) #10	NEB (ENSTGUG00000012003) #11	TNFAIP6 (ENSTGUG00000012000) #13	NMI (ENSTGUG00000011996) #15	RBM43 (ENSTGUG00000011995) #16	ENSTGUG00000021053	ENSTGUG00000028378	RND3 (ENSTGUG00000011991) #21	MMADHC (ENSTGUG00000011984) #22	ENSTGUG00000028714	LYPD6 (ENSTGUG00000011981) #23	ENSTGUG00000019485	LYPD6B (ENSTGUG00000020162) #24	KIF5C (ENSTGUG00000011950) #25	EPC2 (ENSTGUG00000011944) #27	MBD5 (ENSTGUG00000011939) #29	ENSTGUG00000021808	ORC4 (ENSTGUG00000011929) #30	ACVR2A (ENSTGUG00000011916) #32	ZEB2 (ENSTGUG00000011904) #33	GTDC1 (ENSTGUG00000011902) #34	ARHGAP15 (ENSTGUG00000011883) #36	KYNU (ENSTGUG00000011872) #37	LRP1B (ENSTGUG00000011849)
Medium ground finch	MODERN SPECIES	1												NMI (ENSGFOG00000005782) #15	RBM43 (ENSGFOG00000005798) #16	RND3 (ENSGFOG00000005858) #21	ENSGFOG00000005861	MMADHC (ENSGFOG00000005864) #22	LYPD6 (ENSGFOG00000005872) #23	LYPD6B (ENSGFOG00000005878) #24	KIF5C (ENSGFOG00000005880) #25	EPC2 (ENSGFOG00000005891) #27	ENSGFOG00000005897	ENSGFOG00000005904 #30	ENSGFOG00000005920 #30	ACVR2A (ENSGFOG00000005925) #32	ZEB2 (ENSGFOG00000000020) #33	GTDC1 (ENSGFOG00000000024) #34	ARHGAP15 (ENSGFOG00000000095) #36	KYNU (ENSGFOG00000000105) #37	LRP1B (ENSGFOG00000000311)	ENSGFOG00000002046	NXPH2 (ENSGFOG00000002058)
Neognathae_c	ANCESTRAL SPECIES	9	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00960000189410	ENSGT00940000160835
Golden eagle	MODERN SPECIES	22	NR4A2 (ENSACCG00020012439)	KCNJ3 (ENSACCG00020012424)	GALNT13 (ENSACCG00020012390)	RPRM (ENSACCG00020012360)	PRPF40A (ENSACCG00020012312)	FMNL2 (ENSACCG00020012193)	STAM2 (ENSACCG00020012068) #8	CACNB4 (ENSACCG00020012004) #9	ARL5A (ENSACCG00020011953) #10	NEB (ENSACCG00020008753) #11	RIF1 (ENSACCG00020004834) #12	TNFAIP6 (ENSACCG00020004742) #13	NMI (ENSACCG00020004728) #15	RBM43 (ENSACCG00020004722) #16	RND3 (ENSACCG00020004714) #21	MMADHC (ENSACCG00020004705) #22	LYPD6 (ENSACCG00020004700) #23	LYPD6B (ENSACCG00020004692) #24	KIF5C (ENSACCG00020004682) #25	EPC2 (ENSACCG00020004673) #27	MBD5 (ENSACCG00020004667) #29	ORC4 (ENSACCG00020004654) #30	ACVR2A (ENSACCG00020004639) #32	ENSACCG00020004620	ZEB2 (ENSACCG00020004610) #33	GTDC1 (ENSACCG00020004583) #34	ARHGAP15 (ENSACCG00020004554) #36	KYNU (ENSACCG00020004543) #37	LRP1B (ENSACCG00020003781)	ENSACCG00020002322	ENSACCG00020002307
Kakapo	MODERN SPECIES	22	NR4A2 (ENSSHBG00005012900)	KCNJ3 (ENSSHBG00005012922)	GALNT13 (ENSSHBG00005012937)	RPRM (ENSSHBG00005012981)	PRPF40A (ENSSHBG00005013368)	FMNL2 (ENSSHBG00005017491)	STAM2 (ENSSHBG00005017498) #8	CACNB4 (ENSSHBG00005017507) #9	ARL5A (ENSSHBG00005017513) #10	NEB (ENSSHBG00005017527) #11	RIF1 (ENSSHBG00005017612) #12	TNFAIP6 (ENSSHBG00005017775) #13	NMI (ENSSHBG00005017783) #15	RBM43 (ENSSHBG00005017793) #16	RND3 (ENSSHBG00005017805) #21	MMADHC (ENSSHBG00005017816) #22	LYPD6 (ENSSHBG00005017825) #23	LYPD6B (ENSSHBG00005017884) #24	KIF5C (ENSSHBG00005017894) #25	EPC2 (ENSSHBG00005017902) #27	MBD5 (ENSSHBG00005017919) #29	ORC4 (ENSSHBG00005017938) #30	ACVR2A (ENSSHBG00005017945) #32	ZEB2 (ENSSHBG00005017953) #33	GTDC1 (ENSSHBG00005017963) #34	ARHGAP15 (ENSSHBG00005017968) #36	KYNU (ENSSHBG00005017982) #37	LRP1B (ENSSHBG00005018190)	ENSSHBG00005019612	ENSSHBG00005019617	ENSSHBG00005019621
Galloanserae	ANCESTRAL SPECIES	7	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555	ENSGT00940000166779
Anatidae	ANCESTRAL SPECIES	37	ENSGT00950000183038.a.b.b.b.f	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.s #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00960000193288	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136
Pink-footed goose	MODERN SPECIES	25							STAM2 (ENSABRG00000011024) #8	CACNB4 (ENSABRG00000011008) #9	ARL5A (ENSABRG00000010987) #10	ENSABRG00000010176 #11	RIF1 (ENSABRG00000010041) #12	TNFAIP6 (ENSABRG00000010014) #13	ENSABRG00000010005 #15	RBM43 (ENSABRG00000010000) #16	RND3 (ENSABRG00000009986) #21	MMADHC (ENSABRG00000009981) #22	LYPD6 (ENSABRG00000009936) #23	LYPD6B (ENSABRG00000009917) #24	KIF5C (ENSABRG00000008750) #25	EPC2 (ENSABRG00000008493) #27	MBD5 (ENSABRG00000008432) #29	ORC4 (ENSABRG00000008400) #30	ACVR2A (ENSABRG00000008383) #32	ENSABRG00000008258	ZEB2 (ENSABRG00000008234) #33	GTDC1 (ENSABRG00000008212) #34	ARHGAP15 (ENSABRG00000008179) #36	KYNU (ENSABRG00000008161) #37	LRP1B (ENSABRG00000007918)	ENSABRG00000007871	ENSABRG00000007865
Duck	MODERN SPECIES	25	CXCR4 (ENSAPLG00000001879)	KCNJ3 (ENSAPLG00000011864)	GALNT13 (ENSAPLG00000011024)	PRPF40A (ENSAPLG00000010600)	FMNL2 (ENSAPLG00000009989)	STAM2 (ENSAPLG00000009755) #8	CACNB4 (ENSAPLG00000009361) #9	ARL5A (ENSAPLG00000022181) #10	ENSAPLG00000007227 #11	ENSAPLG00000029124 #11	ENSAPLG00000021162 #11	RIF1 (ENSAPLG00000007092) #12	TNFAIP6 (ENSAPLG00000006901) #13	ENSAPLG00000006787 #16	RND3 (ENSAPLG00000006777) #21	MMADHC (ENSAPLG00000006746) #22	LYPD6 (ENSAPLG00000006742) #23	LYPD6B (ENSAPLG00000006734) #24	KIF5C (ENSAPLG00000005832) #25	EPC2 (ENSAPLG00000010318) #27	MBD5 (ENSAPLG00000010489) #29	ORC4 (ENSAPLG00000010668) #30	ACVR2A (ENSAPLG00000011198) #32	ZEB2 (ENSAPLG00000007687) #33	GTDC1 (ENSAPLG00000007900) #34	ARHGAP15 (ENSAPLG00000008021) #36	KYNU (ENSAPLG00000008142) #37	LRP1B (ENSAPLG00000023161)	ENSAPLG00000018223	ENSAPLG00000025771	ENSAPLG00000008881
Phasianidae	ANCESTRAL SPECIES	8	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.k #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00900000141555	ENSGT00940000166779	ENSGT00940000166136
Japanese quail	MODERN SPECIES	25	NR4A2 (ENSCJPG00005020500)	KCNJ3 (ENSCJPG00005020503)	GALNT13 (ENSCJPG00005020504)	RPRM (ENSCJPG00005020506)	PRPF40A (ENSCJPG00005020508)	FMNL2 (ENSCJPG00005020511)	STAM2 (ENSCJPG00005020512) #8	CACNB4 (ENSCJPG00005020513) #9	ARL5A (ENSCJPG00005020514) #10	ENSCJPG00005020515 #11	RIF1 (ENSCJPG00005020659) #12	TNFAIP6 (ENSCJPG00005020664) #13	NMI (ENSCJPG00005020666) #15	RBM43 (ENSCJPG00005020668) #16	RND3 (ENSCJPG00005020670) #21	MMADHC (ENSCJPG00005020675) #22	LYPD6 (ENSCJPG00005020681) #23	LYPD6B (ENSCJPG00005020687) #24	KIF5C (ENSCJPG00005020706) #25	EPC2 (ENSCJPG00005020765) #27	MBD5 (ENSCJPG00005020766) #29	ORC4 (ENSCJPG00005020767) #30	ACVR2A (ENSCJPG00005020768) #32	ZEB2 (ENSCJPG00005020782) #33	GTDC1 (ENSCJPG00005020785) #34	ARHGAP15 (ENSCJPG00005020786) #36	UPP2 (ENSCJPG00005020788)	CCDC148 (ENSCJPG00005020789)	PKP4 (ENSCJPG00005020790)	ENSCJPG00005020791	TANC1 (ENSCJPG00005020796)
Phasianidae_b	ANCESTRAL SPECIES	8	ENSGT00950000183038.a.b.b.b	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.k #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Chicken	MODERN SPECIES	36	GALNT13 (ENSGALG00010010448)	RPRM (ENSGALG00010011002)	PRPF40A (ENSGALG00010010386)	FMNL2 (ENSGALG00010010336)	STAM2 (ENSGALG00010010287) #8	CACNB4 (ENSGALG00010010255) #9	ARL5A (ENSGALG00010010205) #10	ENSGALG00010010195 #11	ENSGALG00010010115 #11	RIF1 (ENSGALG00010009850) #12	TNFAIP6 (ENSGALG00010009793) #13	NMI (ENSGALG00010009731) #15	RBM43 (ENSGALG00010009690) #16	ENSGALG00010009641	RND3 (ENSGALG00010009638) #21	MMADHC (ENSGALG00010009609) #22	LYPD6 (ENSGALG00010009591) #23	LYPD6B (ENSGALG00010009583) #24	KIF5C (ENSGALG00010009578) #25	EPC2 (ENSGALG00010009555) #27	MBD5 (ENSGALG00010009515) #29	ORC4 (ENSGALG00010009498) #30	ACVR2A (ENSGALG00010009474) #32	ZEB2 (ENSGALG00010009461) #33	GTDC1 (ENSGALG00010009435) #34	ARHGAP15 (ENSGALG00010009373) #36	KYNU (ENSGALG00010009338) #37	ENSGALG00010009269	ENSGALG00010011353	ENSGALG00010009257	ENSGALG00010009224
Turkey	MODERN SPECIES	27	ENSMGAG00000020828	ENSMGAG00000022989	ENSMGAG00000022357	ENSMGAG00000012615 #37	ENSMGAG00000020185	ENSMGAG00000012624 #34	ENSMGAG00000019606 #34	ENSMGAG00000012628 #33	ENSMGAG00000018373 #33	ENSMGAG00000012670 #30	ENSMGAG00000012656 #32	MBD5 (ENSMGAG00000012693) #29	ENSMGAG00000012689 #27	ENSMGAG00000012694 #25	LYPD6B (ENSMGAG00000012711) #24	ENSMGAG00000012714 #22	ENSMGAG00000012713 #23	RND3 (ENSMGAG00000019988) #21	ENSMGAG00000012721 #16	ENSMGAG00000012727 #13	ENSMGAG00000012732 #12	ENSMGAG00000017715 #11	ENSMGAG00000022891 #11	ENSMGAG00000019364 #11	ENSMGAG00000012743 #11	ENSMGAG00000012782 #11	ENSMGAG00000012795 #10	ENSMGAG00000012799 #9	STAM2 (ENSMGAG00000012813) #8	ENSMGAG00000012843	ENSMGAG00000012826
African ostrich	MODERN SPECIES	319	KCNJ3 (ENSSCUG00000003749)	GALNT13 (ENSSCUG00000003741)	ENSSCUG00000003735	ENSSCUG00000003733	PRPF40A (ENSSCUG00000003728)	FMNL2 (ENSSCUG00000003723)	STAM2 (ENSSCUG00000003717) #8	CACNB4 (ENSSCUG00000003713) #9	ARL5A (ENSSCUG00000003706) #10	NEB (ENSSCUG00000003691) #11	RIF1 (ENSSCUG00000003638) #12	TNFAIP6 (ENSSCUG00000003603) #13	NMI (ENSSCUG00000003597) #15	RBM43 (ENSSCUG00000003594) #16	RND3 (ENSSCUG00000003588) #21	MMADHC (ENSSCUG00000003584) #22	LYPD6 (ENSSCUG00000003581) #23	LYPD6B (ENSSCUG00000003580) #24	KIF5C (ENSSCUG00000003575) #25	EPC2 (ENSSCUG00000003574) #27	MBD5 (ENSSCUG00000003568) #29
Australian saltwater crocodile	MODERN SPECIES	66	KCNJ3 (ENSCPRG00005008883)	GALNT13 (ENSCPRG00005008830)	ARL6IP6 (ENSCPRG00005008806)	PRPF40A (ENSCPRG00005008786)	FMNL2 (ENSCPRG00005008762)	STAM2 (ENSCPRG00005008747) #8	CACNB4 (ENSCPRG00005008584) #9	ARL5A (ENSCPRG00005008551) #10	ENSCPRG00005008539 #11	ENSCPRG00005008458 #11	RIF1 (ENSCPRG00005008380) #12	TNFAIP6 (ENSCPRG00005008363) #13	NMI (ENSCPRG00005008353) #15	RBM43 (ENSCPRG00005008350) #16	RND3 (ENSCPRG00005008330) #21	MMADHC (ENSCPRG00005008285) #22	LYPD6 (ENSCPRG00005008268) #23	LYPD6B (ENSCPRG00005008266) #24	KIF5C (ENSCPRG00005007708) #25	EPC2 (ENSCPRG00005007668) #27	MBD5 (ENSCPRG00005007665) #29	ORC4 (ENSCPRG00005007654) #30	ACVR2A (ENSCPRG00005007643) #32	ENSCPRG00005007629	ZEB2 (ENSCPRG00005007598) #33	GTDC1 (ENSCPRG00005007582) #34	ENSCPRG00005007562	ARHGAP15 (ENSCPRG00005007510) #36	ENSCPRG00005007469	KYNU (ENSCPRG00005007454) #37	LRP1B (ENSCPRG00005005815)
Cryptodira	ANCESTRAL SPECIES	5	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Testudinoidea	ANCESTRAL SPECIES	11	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.j #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Emydidae	ANCESTRAL SPECIES	4	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.j #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Three-toed box turtle	MODERN SPECIES	25	NR4A2 (ENSTMTG00000022554)	KCNJ3 (ENSTMTG00000022553)	GALNT13 (ENSTMTG00000022547)	RPRM (ENSTMTG00000022542)	ARL6IP6 (ENSTMTG00000022540)	PRPF40A (ENSTMTG00000022533)	FMNL2 (ENSTMTG00000022518)	STAM2 (ENSTMTG00000022506) #8	CACNB4 (ENSTMTG00000022421) #9	ARL5A (ENSTMTG00000022372) #10	NEB (ENSTMTG00000016118) #11	RIF1 (ENSTMTG00000013981) #12	NMI (ENSTMTG00000013868) #15	RBM43 (ENSTMTG00000013865) #16	RND3 (ENSTMTG00000013856) #21	MMADHC (ENSTMTG00000013842) #22	LYPD6 (ENSTMTG00000013835) #23	LYPD6B (ENSTMTG00000013809) #24	KIF5C (ENSTMTG00000013757) #25	EPC2 (ENSTMTG00000013718) #27	MBD5 (ENSTMTG00000013709) #29	ORC4 (ENSTMTG00000013683) #30	ACVR2A (ENSTMTG00000013661) #32	ENSTMTG00000013650	ZEB2 (ENSTMTG00000013632) #33	GTDC1 (ENSTMTG00000013582) #34	ARHGAP15 (ENSTMTG00000013531) #36	KYNU (ENSTMTG00000013497) #37	LRP1B (ENSTMTG00000013281)	ENSTMTG00000013165	ENSTMTG00000013143
painted turtle	MODERN SPECIES	766			RPRM (ENSCPBG00000000230)	ARL6IP6 (ENSCPBG00000000213)	PRPF40A (ENSCPBG00000000174)	FMNL2 (ENSCPBG00000026424)	STAM2 (ENSCPBG00000026351) #8	CACNB4 (ENSCPBG00000026340) #9	ARL5A (ENSCPBG00000026331) #10	NEB (ENSCPBG00000026030) #11	RIF1 (ENSCPBG00000025885) #12	TNFAIP6 (ENSCPBG00000025850) #13	NMI (ENSCPBG00000025846) #15	RBM43 (ENSCPBG00000025841) #16	RND3 (ENSCPBG00000025828) #21	MMADHC (ENSCPBG00000025822) #22	LYPD6 (ENSCPBG00000025812) #23	LYPD6B (ENSCPBG00000025808) #24	KIF5C (ENSCPBG00000025802) #25	EPC2 (ENSCPBG00000025795) #27	MBD5 (ENSCPBG00000025788) #29	ORC4 (ENSCPBG00000025785) #30	ACVR2A (ENSCPBG00000025780) #32	ENSCPBG00000025775	ENSCPBG00000025774
Testudinidae	ANCESTRAL SPECIES	8	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.j #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631.g #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Goode s thornscrub tortoise	MODERN SPECIES	2	GALNT13 (ENSGEVG00005019923)	RPRM (ENSGEVG00005019943)	ARL6IP6 (ENSGEVG00005019950)	PRPF40A (ENSGEVG00005019971)	FMNL2 (ENSGEVG00005020309)	STAM2 (ENSGEVG00005020687) #8	CACNB4 (ENSGEVG00005020734) #9	ARL5A (ENSGEVG00005020782) #10	NEB (ENSGEVG00005020817) #11	RIF1 (ENSGEVG00005020864) #12	TNFAIP6 (ENSGEVG00005020884) #13	NMI (ENSGEVG00005020889) #15	RBM43 (ENSGEVG00005020902) #16	RND3 (ENSGEVG00005020917) #21	ENSGEVG00005020925	MMADHC (ENSGEVG00005020928) #22	LYPD6 (ENSGEVG00005020933) #23	LYPD6B (ENSGEVG00005020935) #24	KIF5C (ENSGEVG00005020950) #25	EPC2 (ENSGEVG00005020958) #27	MBD5 (ENSGEVG00005020959) #29	ORC4 (ENSGEVG00005020967) #30	ACVR2A (ENSGEVG00005020977) #32	ZEB2 (ENSGEVG00005020983) #33	GTDC1 (ENSGEVG00005020989) #34	ARHGAP15 (ENSGEVG00005020993) #36	KYNU (ENSGEVG00005021006) #37	LRP1B (ENSGEVG00005021016)	ENSGEVG00005021033	ENSGEVG00005021039	ENSGEVG00005021042
Abingdon island giant tortoise	MODERN SPECIES	2716																MMADHC (ENSCABG00000014868) #22	LYPD6 (ENSCABG00000014872) #23	LYPD6B (ENSCABG00000014887) #24	KIF5C (ENSCABG00000014889) #25
Chinese turtle	MODERN SPECIES	1244	RPRM (ENSPSIG00000001821)	ENSPSIG00000007594	PRPF40A (ENSPSIG00000007197)	FMNL2 (ENSPSIG00000006880)	STAM2 (ENSPSIG00000017391) #8	CACNB4 (ENSPSIG00000016120) #9	ENSPSIG00000016101	ARL5A (ENSPSIG00000016095) #10	NEB (ENSPSIG00000012844) #11	RIF1 (ENSPSIG00000012517) #12	TNFAIP6 (ENSPSIG00000011601) #13	NMI (ENSPSIG00000011462) #15	RBM43 (ENSPSIG00000011378) #16	ENSPSIG00000001819	RND3 (ENSPSIG00000010783) #21	MMADHC (ENSPSIG00000009795) #22	LYPD6 (ENSPSIG00000009279) #23	LYPD6B (ENSPSIG00000009271) #24	GPR20 (ENSPSIG00000001817)	ENSPSIG00000008605	PTP4A3 (ENSPSIG00000008204)	ENSPSIG00000001814
Lepidosauria	ANCESTRAL SPECIES	7	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT01000000220430	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00940000181338	ENSGT00390000008033 #37	ENSGT00900000142862	ENSGT00940000157521.b
Episquamata	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00940000181338	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136
Laterata	ANCESTRAL SPECIES	2	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000166136	ENSGT00950000182883.b.a.a
Common wall lizard	MODERN SPECIES		ARL6IP6 (ENSPMRG00000008504)	PRPF40A (ENSPMRG00000007825)	FMNL2 (ENSPMRG00000007265)	STAM2 (ENSPMRG00000007098) #8	CACNB4 (ENSPMRG00000007056) #9	ARL5A (ENSPMRG00000007032) #10	NEB (ENSPMRG00000002804) #11	RIF1 (ENSPMRG00000001812) #12	TNFAIP6 (ENSPMRG00000001751) #13	NMI (ENSPMRG00000001742) #15	RBM43 (ENSPMRG00000001735) #16	RND3 (ENSPMRG00000001723) #21	ENSPMRG00000001719	ENSPMRG00000001715	ENSPMRG00000001698	MMADHC (ENSPMRG00000001693) #22	LYPD6 (ENSPMRG00000001684) #23	LYPD6B (ENSPMRG00000001678) #24	ENSPMRG00000001673	KIF5C (ENSPMRG00000000646) #25	EPC2 (ENSPMRG00000000137) #27	MBD5 (ENSPMRG00000000124) #29	ORC4 (ENSPMRG00000000110) #30	ACVR2A (ENSPMRG00000000096) #32	ENSPMRG00000007491	ZEB2 (ENSPMRG00000007466) #33	GTDC1 (ENSPMRG00000007431) #34	ARHGAP15 (ENSPMRG00000007392) #36	ENSPMRG00000007371 #37	ENSPMRG00000007325 #37	ENSPMRG00000007298
Argentine black and white tegu	MODERN SPECIES	20	ENSSMRG00000023303	ENSSMRG00000023304	RPRM (ENSSMRG00000023307)	ARL6IP6 (ENSSMRG00000023309)	PRPF40A (ENSSMRG00000023310)	FMNL2 (ENSSMRG00000023312)	STAM2 (ENSSMRG00000023314) #8	CACNB4 (ENSSMRG00000023315) #9	ARL5A (ENSSMRG00000023317) #10	NEB (ENSSMRG00000023318) #11	RIF1 (ENSSMRG00000023454) #12	TNFAIP6 (ENSSMRG00000023455) #13	ENSSMRG00000023456 #15	RBM43 (ENSSMRG00000023457) #16	RND3 (ENSSMRG00000023459) #21	MMADHC (ENSSMRG00000023460) #22	LYPD6 (ENSSMRG00000023461) #23	LYPD6B (ENSSMRG00000023462) #24	ENSSMRG00000023463	KIF5C (ENSSMRG00000023464) #25	EPC2 (ENSSMRG00000023465) #27	MBD5 (ENSSMRG00000023466) #29	ORC4 (ENSSMRG00000023467) #30	ACVR2A (ENSSMRG00000023468) #32	ZEB2 (ENSSMRG00000023477) #33	GTDC1 (ENSSMRG00000023478) #34	ARHGAP15 (ENSSMRG00000023481) #36	KYNU (ENSSMRG00000023482) #37	LRP1B (ENSSMRG00000023483)	ENSSMRG00000023485	ENSSMRG00000023486
Toxicofera	ANCESTRAL SPECIES	10	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.q #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00530000063686.a.b #16	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00940000181338	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000160835
Elapidae	ANCESTRAL SPECIES		ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904.t	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b.g #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.q #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00940000157541 #21	ENSGT00940000164219.a.a.a.c.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.h #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00940000181338	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000160835
Elapidae_a	ANCESTRAL SPECIES	5	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904.t	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b.g #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.q #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00940000157541 #21	ENSGT00940000164219.a.a.a.c.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.f #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.h #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000160835	ENSGT00940000166136
Acanthophiinae	ANCESTRAL SPECIES	7	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904.t	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b.g #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d.q #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00530000063686.a.a #15	ENSGT00940000157541 #21	ENSGT00940000164219.a.a.a.c.b	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542.f #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a.h #33	ENSGT00390000006631.j #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00940000166779	ENSGT00940000160835	ENSGT00940000166136
Mainland tiger snake	DUPLICATION
Mainland tiger snake	MODERN SPECIES	124	ARL6IP6 (ENSNSUG00000007422)	ENSNSUG00000007421	ENSNSUG00000007412	ENSNSUG00000007393 #8	ENSNSUG00000007040 #9	ENSNSUG00000007038 #10	ENSNSUG00000007037 #11	ENSNSUG00000007030 #11	ENSNSUG00000007012 #12	ENSNSUG00000007000 #13	ENSNSUG00000006997 #15	ENSNSUG00000006996	ENSNSUG00000006995 #21	ENSNSUG00000006993	ENSNSUG00000006991	ENSNSUG00000006990 #22	ENSNSUG00000006987 #23
Mainland tiger snake	MODERN SPECIES	125	ENSNSUG00000008519	ENSNSUG00000008496	ENSNSUG00000008495	ENSNSUG00000008494	PRPF40A (ENSNSUG00000008493)	ENSNSUG00000008491	ENSNSUG00000008487 #8	ENSNSUG00000007603 #9	ENSNSUG00000007601 #10	ENSNSUG00000007578 #11	ENSNSUG00000007567 #12	ENSNSUG00000007562 #13	ENSNSUG00000007557 #15	ENSNSUG00000007556 #21	ENSNSUG00000007555	ENSNSUG00000007554 #22	ENSNSUG00000007548 #23
Eastern brown snake	MODERN SPECIES	7	ENSPTXG00000006716	GALNT13 (ENSPTXG00000006717)	RPRM (ENSPTXG00000006718)	ARL6IP6 (ENSPTXG00000006719)	PRPF40A (ENSPTXG00000006720)	FMNL2 (ENSPTXG00000006737)	STAM2 (ENSPTXG00000009936) #8	CACNB4 (ENSPTXG00000009947) #9	ARL5A (ENSPTXG00000012173) #10	NEB (ENSPTXG00000012187) #11	RIF1 (ENSPTXG00000012982) #12	TNFAIP6 (ENSPTXG00000012986) #13	NMI (ENSPTXG00000012988) #15	RND3 (ENSPTXG00000012993) #21	ENSPTXG00000012996	MMADHC (ENSPTXG00000012998) #22	LYPD6 (ENSPTXG00000013003) #23	LYPD6B (ENSPTXG00000013021) #24	KIF5C (ENSPTXG00000013024) #25	EPC2 (ENSPTXG00000013031) #27	MBD5 (ENSPTXG00000013034) #29	ORC4 (ENSPTXG00000013039) #30	ACVR2A (ENSPTXG00000013042) #32	ENSPTXG00000013045
Blue-lipped sea krait	MODERN SPECIES	3453																MMADHC (ENSLLTG00000017108) #22	LYPD6 (ENSLLTG00000017110) #23
Indian cobra	MODERN SPECIES		GALNT13 (ENSNNAG00000018312)	ENSNNAG00000018322	ENSNNAG00000018324	ENSNNAG00000018325	ENSNNAG00000018328	ARL6IP6 (ENSNNAG00000018331)	FMNL2 (ENSNNAG00000018336)	STAM2 (ENSNNAG00000018344) #8	CACNB4 (ENSNNAG00000018360) #9	ARL5A (ENSNNAG00000018385) #10	NEB (ENSNNAG00000018647) #11	TNFAIP6 (ENSNNAG00000019067) #13	NMI (ENSNNAG00000019069) #15	RND3 (ENSNNAG00000019074) #21	ENSNNAG00000019076	MMADHC (ENSNNAG00000019078) #22	LYPD6 (ENSNNAG00000006713) #23	LYPD6B (ENSNNAG00000006750) #24	ENSNNAG00000006910	KIF5C (ENSNNAG00000007202) #25	EPC2 (ENSNNAG00000012958) #27	MBD5 (ENSNNAG00000013008) #29	ORC4 (ENSNNAG00000013093) #30	ACVR2A (ENSNNAG00000013129) #32	ZEB2 (ENSNNAG00000013202) #33	ENSNNAG00000013247 #34	GTDC1 (ENSNNAG00000013283) #34	ARHGAP15 (ENSNNAG00000013349) #36	ENSNNAG00000013365	KYNU (ENSNNAG00000013382) #37	LRP1B (ENSNNAG00000013416)
Lizard	MODERN SPECIES	916								NEB (ENSACAG00000003769) #11	RIF1 (ENSACAG00000003714) #12	TNFAIP6 (ENSACAG00000003674) #13	ENSACAG00000029399	NMI (ENSACAG00000003644) #15	RBM43 (ENSACAG00000003642) #16	ENSACAG00000037908	RND3 (ENSACAG00000043937) #21	MMADHC (ENSACAG00000003571) #22	LYPD6 (ENSACAG00000003558) #23	LYPD6B (ENSACAG00000003555) #24
tuatara	MODERN SPECIES	1586																MMADHC (ENSSPUG00000002094) #22	LYPD6 (ENSSPUG00000002065) #23	LYPD6B (ENSSPUG00000002044) #24	KIF5C (ENSSPUG00000001989) #25	EPC2 (ENSSPUG00000001980) #27	MBD5 (ENSSPUG00000001943) #29	ENSSPUG00000001933	ENSSPUG00000001902 #30	ENSSPUG00000001892 #30	ACVR2A (ENSSPUG00000001883) #32
Anura	ANCESTRAL SPECIES	7	ENSGT01080000257365.b.a.a.b.a	ENSGT00940000158904	ENSGT00390000010523.c.b	ENSGT00390000009987	ENSGT00930000150980.a	ENSGT00940000155515.a.b.b	ENSGT00940000157055 #8	ENSGT00950000182837.b.b #9	ENSGT00940000154714 #10	ENSGT00940000154533.b.d #11	ENSGT00390000012204 #12	ENSGT00940000157201 #13	ENSGT00940000154311.a.b.o.a	ENSGT00530000063686.a.a #15	ENSGT00940000157541 #21	ENSGT00390000015050 #22	ENSGT00390000000220.B #23	ENSGT00390000000220.A #24	ENSGT00940000158539 #25	ENSGT00940000158526 #27	ENSGT00530000064137.a.b #29	ENSGT00390000016542 #30	ENSGT00940000157233 #32	ENSGT00950000183208.A.c.a #33	ENSGT00390000006631 #34	ENSGT00950000182860.a.b.b #36	ENSGT00390000008033 #37	ENSGT00940000157521.b	ENSGT00950000182883.b.a.a	ENSGT00940000155953	ENSGT00390000002862
Frog	MODERN SPECIES	9	arl6ip6 (ENSXETG00000029993)	prpf40a (ENSXETG00000021713)	fmnl2 (ENSXETG00000021703)	stam2 (ENSXETG00000021702) #8	cacnb4 (ENSXETG00000021694) #9	arl5a (ENSXETG00000021692) #10	kcne3 (ENSXETG00000004531) #11	nr5a1 (ENSXETG00000004530) #12	tnfaip6 (ENSXETG00000004529) #13	ENSXETG00000049120	ENSXETG00000042237	ENSXETG00000004526	ENSXETG00000031130	nmi (ENSXETG00000004525) #15	rnd3 (ENSXETG00000047421) #21	mmadhc (ENSXETG00000004524) #22	lypd6 (ENSXETG00000004522) #23	lypd6b (ENSXETG00000030529) #24	kif5c (ENSXETG00000004486) #25	epc2 (ENSXETG00000024611) #27	mbd5 (ENSXETG00000018214) #29	orc4 (ENSXETG00000021718) #30	acvr2a (ENSXETG00000021720) #32	ENSXETG00000048550	ENSXETG00000047564	zeb2 (ENSXETG00000000237) #33	gtdc1 (ENSXETG00000000254) #34	arhgap15 (ENSXETG00000037989) #36	kynu (ENSXETG00000032399) #37	ENSXETG00000039635	ENSXETG00000040881
Leishan spiny toad	MODERN SPECIES	10	PRPF40A (ENSLLEG00000016291)	FMNL2 (ENSLLEG00000015047)	STAM2 (ENSLLEG00000014859) #8	CACNB4 (ENSLLEG00000014323) #9	ARL5A (ENSLLEG00000014229) #10	NEB (ENSLLEG00000012979) #11	RIF1 (ENSLLEG00000012492) #12	TNFAIP6 (ENSLLEG00000012409) #13	ENSLLEG00000012309	ENSLLEG00000012246	ENSLLEG00000011911	ENSLLEG00000011678 #15	ENSLLEG00000011640	RND3 (ENSLLEG00000011580) #21	ENSLLEG00000011561	MMADHC (ENSLLEG00000011447) #22	LYPD6 (ENSLLEG00000011401) #23	LYPD6B (ENSLLEG00000011339) #24	KIF5C (ENSLLEG00000010575) #25	EPC2 (ENSLLEG00000010232) #27	MBD5 (ENSLLEG00000010115) #29	ORC4 (ENSLLEG00000009923) #30	ACVR2A (ENSLLEG00000009386) #32	ENSLLEG00000009324	ENSLLEG00000009305	ZEB2 (ENSLLEG00000009045) #33	GTDC1 (ENSLLEG00000008844) #34	ENSLLEG00000008819	ENSLLEG00000008799	ARHGAP15 (ENSLLEG00000008547) #36	KYNU (ENSLLEG00000008448) #37