Bilateria	ANCESTRAL SPECIES																	ENSGT00940000155650 #22
Chordata	ANCESTRAL SPECIES																	ENSGT00940000155650 #22
Vertebrata	ANCESTRAL SPECIES	996															ENSGT00950000182859.A.a.a ##21	ENSGT00940000155650 #22
Gnathostomata	ANCESTRAL SPECIES	285										ENSGT00940000153713.B.d	ENSGT01030000234527.A.a.b.b.a	ENSGT00940000158185	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26
Euteleostomi	ANCESTRAL SPECIES	247					ENSGT00390000012630.A #18	ENSGT00940000159140.c.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT01030000234518.A.a.a	ENSGT00940000165044	ENSGT00950000182859.A.a.a.a ##21	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.a.a	ENSGT00950000182859.A.a.b.a.b ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26
Sarcopterygii	ANCESTRAL SPECIES	41											ENSGT00390000012630.A #18	ENSGT00940000159140.c.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C	ENSGT00940000159577
Tetrapoda	ANCESTRAL SPECIES	27	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00950000185681	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00940000159140.c.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Amniota	ANCESTRAL SPECIES	17	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00950000185681	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Mammalia	ANCESTRAL SPECIES	30	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000159345	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Theria	ANCESTRAL SPECIES	18	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Eutheria	ANCESTRAL SPECIES	6	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Boreoeutheria	ANCESTRAL SPECIES	9	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT01090000260046	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT01090000260046	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Glires	ANCESTRAL SPECIES	7	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Rodentia	ANCESTRAL SPECIES	7	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Hystricomorpha	ANCESTRAL SPECIES	30	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Hystricomorpha_a	ANCESTRAL SPECIES	28	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Hystricomorpha_b	ANCESTRAL SPECIES	19	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Long-tailed chinchilla	MODERN SPECIES	115	GABRB2 (ENSCLAG00000012890) #7	ATP10B (ENSCLAG00000014630) #8	ENSCLAG00000014055 #9	SLU7 (ENSCLAG00000011915) #10	FAM200C (ENSCLAG00000017741) #11	C1QTNF2 (ENSCLAG00000015504) #12	CCNJL (ENSCLAG00000013768) #13	FABP6 (ENSCLAG00000012776) #14	PWWP2A (ENSCLAG00000012281) #15	TTC1 (ENSCLAG00000011604) #16	ADRA1B (ENSCLAG00000013326) #17	IL12B (ENSCLAG00000012311) #18	UBLCP1 (ENSCLAG00000015579) #19	RNF145 (ENSCLAG00000014266) #20	EBF1 (ENSCLAG00000015983) #21	CLINT1 (ENSCLAG00000013537) #22	LSM11 (ENSCLAG00000017067) #23	THG1L (ENSCLAG00000013903) #24	SOX30 (ENSCLAG00000011694) #25	ADAM19 (ENSCLAG00000012647) #26	NIPAL4 (ENSCLAG00000014701) #27	FNDC9 (ENSCLAG00000014381) #28	CYFIP2 (ENSCLAG00000011702) #29	ITK (ENSCLAG00000012785) #30	GARIN3 (ENSCLAG00000014348) #31	MED7 (ENSCLAG00000016147) #32	HAVCR2 (ENSCLAG00000016115) #33	SGCD (ENSCLAG00000014749) #34	MRPL22 (ENSCLAG00000011777) #35	GEMIN5 (ENSCLAG00000011942) #36	CNOT8 (ENSCLAG00000012116) #37
Degu	DUPLICATION
Degu	DUPLICATION
Degu	DUPLICATION
Degu	MODERN SPECIES	132	PRDM14 (ENSODEG00000003245)	NCOA2 (ENSODEG00000003435)	ENSODEG00000018956	TRAM1 (ENSODEG00000003735)	LACTB2 (ENSODEG00000003774)	XKR9 (ENSODEG00000003655)	ENSODEG00000019011	ENSODEG00000003759	ENSODEG00000003933	EYA1 (ENSODEG00000003994)	MSC (ENSODEG00000004396)	TRPA1 (ENSODEG00000004465)	KCNB2 (ENSODEG00000004106)	ENSODEG00000004130	ENSODEG00000004166	ENSODEG00000004364 #22	SBSPON (ENSODEG00000004392)	C8orf89 (ENSODEG00000004421)	ENSODEG00000004457	RDH10 (ENSODEG00000003490)	STAU2 (ENSODEG00000003610)	UBE2W (ENSODEG00000003806)	ENSODEG00000003911	TMEM70 (ENSODEG00000003940)	LY96 (ENSODEG00000004007)	JPH1 (ENSODEG00000002990)	GDAP1 (ENSODEG00000003006)	ENSODEG00000003062	PI15 (ENSODEG00000003073)	CRISPLD1 (ENSODEG00000003148)
Degu	MODERN SPECIES	118	PMEPA1 (ENSODEG00000007664)	PCK1 (ENSODEG00000007233)	RBM38 (ENSODEG00000007980)	ENSODEG00000005687	SPO11 (ENSODEG00000006573)	BMP7 (ENSODEG00000005399)	ENSODEG00000005762	ENSODEG00000006029	RTF2 (ENSODEG00000005634)	GCNT7 (ENSODEG00000006051)	CASS4 (ENSODEG00000006198)	ENSODEG00000019482	ENSODEG00000007572	FAM210B (ENSODEG00000005961)	MC3R (ENSODEG00000019495)	ENSODEG00000007202 #22	CBLN4 (ENSODEG00000008098)	DOK5 (ENSODEG00000009072)	ENSODEG00000005992	CYP24A1 (ENSODEG00000005827)	ENSODEG00000006282	ZNF217 (ENSODEG00000006753)	ENSODEG00000019595	ENSODEG00000019550	ZFP64 (ENSODEG00000005735)	ENSODEG00000006564	ENSODEG00000006762	ATP9A (ENSODEG00000006908)	NFATC2 (ENSODEG00000006560)	ENSODEG00000007977	KCNG1 (ENSODEG00000005905)
Degu	MODERN SPECIES	70	ATP10B (ENSODEG00000010055) #8	ENSODEG00000010237 #9	ENSODEG00000010998 #10	FAM200C (ENSODEG00000019938) #11	C1QTNF2 (ENSODEG00000010469) #12	CCNJL (ENSODEG00000011156) #13	ENSODEG00000012262 #14	TTC1 (ENSODEG00000010814) #16	ADRA1B (ENSODEG00000010364) #17	IL12B (ENSODEG00000011137) #18	ENSODEG00000011564 #19	ENSODEG00000010153 #20	ENSODEG00000009967	ENSODEG00000010777 #21	ENSODEG00000009382 #21	ENSODEG00000010558 #22	LSM11 (ENSODEG00000009738) #23	THG1L (ENSODEG00000009719) #24	SOX30 (ENSODEG00000009453) #25	ADAM19 (ENSODEG00000009808) #26	NIPAL4 (ENSODEG00000009499) #27	ENSODEG00000009352	FNDC9 (ENSODEG00000019664) #28	CYFIP2 (ENSODEG00000009223) #29	ITK (ENSODEG00000012007) #30	GARIN3 (ENSODEG00000014426) #31	ENSODEG00000020034 #32	HAVCR2 (ENSODEG00000011256) #33	ENSODEG00000013454	SGCD (ENSODEG00000011784) #34	ENSODEG00000010239
Degu	DUPLICATION
Degu	MODERN SPECIES	304															BMP15 (ENSODEG00000000854)	ENSODEG00000000886 #22	ENSODEG00000001005	DGKK (ENSODEG00000001078)	AKAP4 (ENSODEG00000001223)	ENSODEG00000018669	ENSODEG00000001449	CLCN5 (ENSODEG00000001495)	ENSODEG00000001517	USP27X (ENSODEG00000001537)	ENSODEG00000018712	ENSODEG00000018701	ENSODEG00000018700	PPP1R3F (ENSODEG00000001563)	FOXP3 (ENSODEG00000001628)	CCDC22 (ENSODEG00000001642)	ENSODEG00000001692
Degu	MODERN SPECIES	374																ENSODEG00000010333 #22	ENSODEG00000019799	ENSODEG00000019806	ENSODEG00000011020	GPR173 (ENSODEG00000019865)	TSPYL2 (ENSODEG00000010081)	KDM5C (ENSODEG00000009463)	IQSEC2 (ENSODEG00000010779)	ENSODEG00000019864	SMC1A (ENSODEG00000010101)	RIBC1 (ENSODEG00000010330)	ENSODEG00000010698	ENSODEG00000010612	ENSODEG00000019693	HUWE1 (ENSODEG00000010114)
Guinea pig	MODERN SPECIES	17	GABRB2 (ENSCPOG00000015215) #7	ATP10B (ENSCPOG00000015077) #8	ENSCPOG00000011971 #9	SLU7 (ENSCPOG00000004484) #10	FAM200C (ENSCPOG00000040506) #11	C1QTNF2 (ENSCPOG00000002753) #12	CCNJL (ENSCPOG00000034225) #13	FABP6 (ENSCPOG00000025902) #14	PWWP2A (ENSCPOG00000004130) #15	TTC1 (ENSCPOG00000004128) #16	ADRA1B (ENSCPOG00000019316) #17	IL12B (ENSCPOG00000001622) #18	UBLCP1 (ENSCPOG00000001621) #19	RNF145 (ENSCPOG00000008166) #20	EBF1 (ENSCPOG00000026184) #21	CLINT1 (ENSCPOG00000000908) #22	LSM11 (ENSCPOG00000000906) #23	THG1L (ENSCPOG00000037046) #24	SOX30 (ENSCPOG00000000397) #25	ADAM19 (ENSCPOG00000007717) #26	NIPAL4 (ENSCPOG00000007712) #27	FNDC9 (ENSCPOG00000023471) #28	CYFIP2 (ENSCPOG00000008377) #29	ITK (ENSCPOG00000010299) #30	GARIN3 (ENSCPOG00000030262) #31	MED7 (ENSCPOG00000031038) #32	ENSCPOG00000040495 #33	ENSCPOG00000036932 #33	ENSCPOG00000005891	SGCD (ENSCPOG00000003738) #34	MRPL22 (ENSCPOG00000006767) #35
Naked mole-rat female	MODERN SPECIES	23	ENSHGLG00000008073 #9	SLU7 (ENSHGLG00000009442) #10	FAM200C (ENSHGLG00000036354) #11	C1QTNF2 (ENSHGLG00000046801) #12	CCNJL (ENSHGLG00000041358) #13	ENSHGLG00000009227 #14	PWWP2A (ENSHGLG00000010411) #15	ENSHGLG00000015069 #16	ADRA1B (ENSHGLG00000015871) #17	IL12B (ENSHGLG00000013907) #18	UBLCP1 (ENSHGLG00000042837) #19	RNF145 (ENSHGLG00000018986) #20	EBF1 (ENSHGLG00000015515) #21	ENSHGLG00000044777	ENSHGLG00000039765	CLINT1 (ENSHGLG00000048062) #22	LSM11 (ENSHGLG00000042054) #23	THG1L (ENSHGLG00000032403) #24	SOX30 (ENSHGLG00000009847) #25	ADAM19 (ENSHGLG00000015559) #26	NIPAL4 (ENSHGLG00000015680) #27	FNDC9 (ENSHGLG00000035156) #28	CYFIP2 (ENSHGLG00000013823) #29	ITK (ENSHGLG00000018493) #30	GARIN3 (ENSHGLG00000016204) #31	ENSHGLG00000021195	ENSHGLG00000014147 #32	ENSHGLG00000046979	ENSHGLG00000017927	ENSHGLG00000042356	ENSHGLG00000041626
Sciuridae	DUPLICATION
Sciuridae	ANCESTRAL SPECIES																	ENSGT00940000155650.i #22
Eurasian red squirrel	MODERN SPECIES	1	ENSSVLG00005012096	ZNF654 (ENSSVLG00005012126)	ENSSVLG00005012217	ENSSVLG00005012271	EPHA3 (ENSSVLG00005012314)	ENSSVLG00005012746	PROS1 (ENSSVLG00005012814)	ARL13B (ENSSVLG00005012937)	ENSSVLG00005013029	NSUN3 (ENSSVLG00005013136)	ENSSVLG00005013214	ENSSVLG00005013290	ENSSVLG00005013345	ENSSVLG00005013423	ENSSVLG00005013472	ENSSVLG00005013503 #22	EPHA6 (ENSSVLG00005013877)	ARL6 (ENSSVLG00005014235)	CRYBG3 (ENSSVLG00005014314)	ENSSVLG00005014532	GABRR3 (ENSSVLG00005014712)	ENSSVLG00005014824	ENSSVLG00005014876	ENSSVLG00005014918	ENSSVLG00005014970	ENSSVLG00005014987	ENSSVLG00005015048	ENSSVLG00005015069	ENSSVLG00005015086	ENSSVLG00005015105	ENSSVLG00005015141
Sciuridae	ANCESTRAL SPECIES	33	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.x #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650.j #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Marmotini	ANCESTRAL SPECIES	38	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.x.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650.j #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000163365.a	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Alpin marmot	MODERN SPECIES	31	GABRA6 (ENSMMMG00000012710)	GABRB2 (ENSMMMG00000012737) #7	ATP10B (ENSMMMG00000012800) #8	ENSMMMG00000012834 #9	ENSMMMG00000012841 #10	C1QTNF2 (ENSMMMG00000012860) #12	CCNJL (ENSMMMG00000012864) #13	FABP6 (ENSMMMG00000012902) #14	PWWP2A (ENSMMMG00000012906) #15	TTC1 (ENSMMMG00000012911) #16	ADRA1B (ENSMMMG00000012931) #17	IL12B (ENSMMMG00000012950) #18	ENSMMMG00000012967 #19	RNF145 (ENSMMMG00000012987) #20	EBF1 (ENSMMMG00000013034) #21	CLINT1 (ENSMMMG00000013122) #22	THG1L (ENSMMMG00000013157) #24	ENSMMMG00000013174	NIPAL4 (ENSMMMG00000013210) #27	CYFIP2 (ENSMMMG00000013228) #29	FNDC9 (ENSMMMG00000013327) #28	ITK (ENSMMMG00000013337) #30	GARIN3 (ENSMMMG00000013418) #31	MED7 (ENSMMMG00000013429) #32	HAVCR2 (ENSMMMG00000013436) #33	ENSMMMG00000013465	ENSMMMG00000013477	ENSMMMG00000013485	ENSMMMG00000013491	SGCD (ENSMMMG00000013502) #34	MRPL22 (ENSMMMG00000013526) #35
Marmotini_b	ANCESTRAL SPECIES	96	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.x.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650.j #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000163365.a	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Arctic ground squirrel	MODERN SPECIES	57															EBF1 (ENSUPAG00010016626) #21	CLINT1 (ENSUPAG00010016690) #22	LSM11 (ENSUPAG00010016757) #23	THG1L (ENSUPAG00010016766) #24	SOX30 (ENSUPAG00010016772) #25	ENSUPAG00010016784	NIPAL4 (ENSUPAG00010016803) #27	CYFIP2 (ENSUPAG00010016820) #29	FNDC9 (ENSUPAG00010016907) #28	ITK (ENSUPAG00010016912) #30	GARIN3 (ENSUPAG00010016991) #31	MED7 (ENSUPAG00010017002) #32	HAVCR2 (ENSUPAG00010017006) #33	ENSUPAG00010017019	TIMD4 (ENSUPAG00010017040)	ENSUPAG00010017045	ENSUPAG00010017048
Squirrel	MODERN SPECIES	115	ATP10B (ENSSTOG00000015071) #8	SLU7 (ENSSTOG00000015057) #10	FAM200C (ENSSTOG00000015054) #11	C1QTNF2 (ENSSTOG00000005319) #12	CCNJL (ENSSTOG00000020277) #13	FABP6 (ENSSTOG00000002847) #14	ENSSTOG00000021953 #15	TTC1 (ENSSTOG00000024913) #16	ADRA1B (ENSSTOG00000026778) #17	IL12B (ENSSTOG00000005006) #18	UBLCP1 (ENSSTOG00000000854) #19	RNF145 (ENSSTOG00000009671) #20	ENSSTOG00000034104 #21	ENSSTOG00000011505 #21	ENSSTOG00000028447	CLINT1 (ENSSTOG00000014253) #22	SOX30 (ENSSTOG00000014216) #25	THG1L (ENSSTOG00000014243) #24	ENSSTOG00000020480	NIPAL4 (ENSSTOG00000001828) #27	CYFIP2 (ENSSTOG00000009237) #29	FNDC9 (ENSSTOG00000029017) #28	ITK (ENSSTOG00000009223) #30	MED7 (ENSSTOG00000009218) #32	ENSSTOG00000026317	SGCD (ENSSTOG00000004356) #34	MRPL22 (ENSSTOG00000005822) #35	GEMIN5 (ENSSTOG00000005759) #36	ENSSTOG00000005745 #37	FAXDC2 (ENSSTOG00000005732)	LARP1 (ENSSTOG00000005678)
Eurasian red squirrel	MODERN SPECIES	15	GABRB2 (ENSSVLG00005019857) #7	ATP10B (ENSSVLG00005020304) #8	ENSSVLG00005020660 #9	SLU7 (ENSSVLG00005020756) #10	FAM200C (ENSSVLG00005020786) #11	C1QTNF2 (ENSSVLG00005020795) #12	CCNJL (ENSSVLG00005020821) #13	FABP6 (ENSSVLG00005020859) #14	PWWP2A (ENSSVLG00005020908) #15	TTC1 (ENSSVLG00005020964) #16	ADRA1B (ENSSVLG00005021005) #17	IL12B (ENSSVLG00005021038) #18	UBLCP1 (ENSSVLG00005021106) #19	RNF145 (ENSSVLG00005021231) #20	EBF1 (ENSSVLG00005021429) #21	CLINT1 (ENSSVLG00005021801) #22	ENSSVLG00005022019	LSM11 (ENSSVLG00005022056) #23	THG1L (ENSSVLG00005022105) #24	SOX30 (ENSSVLG00005022157) #25	ENSSVLG00005022280	NIPAL4 (ENSSVLG00005022324) #27	CYFIP2 (ENSSVLG00005011247) #29	FNDC9 (ENSSVLG00005013019) #28	ITK (ENSSVLG00005013116) #30	GARIN3 (ENSSVLG00005013187) #31	ENSSVLG00005013296 #32	HAVCR2 (ENSSVLG00005013460) #33	ENSSVLG00005013680	ENSSVLG00005013743	ENSSVLG00005013808
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Myomorpha	ANCESTRAL SPECIES	28	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00940000154461.`c
Muroidea	ANCESTRAL SPECIES	10	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00940000154461.`c
Muroidea_A	ANCESTRAL SPECIES	1	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l	ENSGT00520000062120	ENSGT00940000159345.k.a	ENSGT00940000161609
Cricetidae	ANCESTRAL SPECIES		ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l	ENSGT00520000062120	ENSGT00940000159345.k.a	ENSGT00940000161609
Cricetinae	ANCESTRAL SPECIES		ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l	ENSGT00520000062120	ENSGT00940000159345.k.a	ENSGT00940000161609
Chinese hamster chok1gshd	MODERN SPECIES	229	Gabra6 (ENSCGRG00001015664)	Gabrb2 (ENSCGRG00001006669) #7	Atp10b (ENSCGRG00001021960) #8	Pttg1 (ENSCGRG00001001415) #9	Slu7 (ENSCGRG00001016416) #10	C1qtnf2 (ENSCGRG00001023451) #12	Ccnjl (ENSCGRG00001024069) #13	Fabp6 (ENSCGRG00001016322) #14	Pwwp2a (ENSCGRG00001008184) #15	ENSCGRG00001021540 #16	Adra1b (ENSCGRG00001011857) #17	Il12b (ENSCGRG00001001156) #18	Ublcp1 (ENSCGRG00001019223) #19	Rnf145 (ENSCGRG00001023959) #20	Ebf1 (ENSCGRG00001003735) #21	Clint1 (ENSCGRG00001014730) #22	Lsm11 (ENSCGRG00001014281) #23	Thg1l (ENSCGRG00001019597) #24	Sox30 (ENSCGRG00001021269) #25	ENSCGRG00001021524 #26	Nipal4 (ENSCGRG00001000876) #27	Cyfip2 (ENSCGRG00001014640) #29	Fndc9 (ENSCGRG00001007038) #28	Itk (ENSCGRG00001015051) #30	Garin3 (ENSCGRG00001015508) #31	Med7 (ENSCGRG00001003660) #32	Havcr2 (ENSCGRG00001019621) #33	ENSCGRG00001019450	Havcr1 (ENSCGRG00001022176)	Timd4 (ENSCGRG00001009908)	Sgcd (ENSCGRG00001013442) #34
Golden Hamster	MODERN SPECIES	647	Gabra6 (ENSMAUG00000020508)	Gabrb2 (ENSMAUG00000012444) #7	Atp10b (ENSMAUG00000020206) #8	Pttg1 (ENSMAUG00000020009) #9	Slu7 (ENSMAUG00000016739) #10	C1qtnf2 (ENSMAUG00000008815) #12	Ccnjl (ENSMAUG00000007894) #13	Fabp6 (ENSMAUG00000000683) #14	ENSMAUG00000011066 #15	Ttc1 (ENSMAUG00000016834) #16	Adra1b (ENSMAUG00000013092) #17	Il12b (ENSMAUG00000011200) #18	Ublcp1 (ENSMAUG00000016310) #19	Rnf145 (ENSMAUG00000019764) #20	Ebf1 (ENSMAUG00000014249) #21	Clint1 (ENSMAUG00000018312) #22	Lsm11 (ENSMAUG00000016249) #23	Thg1l (ENSMAUG00000012121) #24	Sox30 (ENSMAUG00000016375) #25	ENSMAUG00000001628 #26	Nipal4 (ENSMAUG00000007354) #27	Fndc9 (ENSMAUG00000002327) #28	Cyfip2 (ENSMAUG00000011538) #29	Itk (ENSMAUG00000018699) #30	Garin3 (ENSMAUG00000007741) #31	Med7 (ENSMAUG00000014731) #32	Havcr2 (ENSMAUG00000000929) #33	ENSMAUG00000007758	Dppa1 (ENSMAUG00000014594)	Timd4 (ENSMAUG00000003000)	ENSMAUG00000011659
Cricetidae_B	ANCESTRAL SPECIES		ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT01030000234669.A
Northern American deer mouse	MODERN SPECIES	21	ENSPEMG00000007013 #9	Slu7 (ENSPEMG00000016646) #10	C1qtnf2 (ENSPEMG00000008301) #12	Ccnjl (ENSPEMG00000007234) #13	Fabp6 (ENSPEMG00000004485) #14	Pwwp2a (ENSPEMG00000000774) #15	Ttc1 (ENSPEMG00000018843) #16	Adra1b (ENSPEMG00000018698) #17	ENSPEMG00000012981	ENSPEMG00000018217	Il12b (ENSPEMG00000015420) #18	Ublcp1 (ENSPEMG00000014160) #19	ENSPEMG00000028711	Rnf145 (ENSPEMG00000016589) #20	Ebf1 (ENSPEMG00000022652) #21	Clint1 (ENSPEMG00000022779) #22	Lsm11 (ENSPEMG00000028614) #23	Thg1l (ENSPEMG00000022707) #24	Sox30 (ENSPEMG00000000554) #25	Adam19 (ENSPEMG00000011893)	Nipal4 (ENSPEMG00000030993) #27	Cyfip2 (ENSPEMG00000013244) #29	Fndc9 (ENSPEMG00000030039) #28	Itk (ENSPEMG00000014168) #30	Garin3 (ENSPEMG00000007819) #31	Med7 (ENSPEMG00000019778) #32	Havcr2 (ENSPEMG00000019286) #33	ENSPEMG00000029530	ENSPEMG00000019712	ENSPEMG00000028909	ENSPEMG00000025066
Prairie vole	MODERN SPECIES	113	Gabrb2 (ENSMOCG00000000191) #7	Atp10b (ENSMOCG00000012356) #8	Pttg1 (ENSMOCG00000020845) #9	Slu7 (ENSMOCG00000012963) #10	C1qtnf2 (ENSMOCG00000000115) #12	Ccnjl (ENSMOCG00000014118) #13	Fabp6 (ENSMOCG00000019592) #14	Pwwp2a (ENSMOCG00000021497) #15	Ttc1 (ENSMOCG00000012530) #16	Adra1b (ENSMOCG00000008511) #17	Il12b (ENSMOCG00000012269) #18	Ublcp1 (ENSMOCG00000009575) #19	Rnf145 (ENSMOCG00000000765) #20	Ebf1 (ENSMOCG00000003946) #21	ENSMOCG00000022703	Clint1 (ENSMOCG00000011170) #22	Lsm11 (ENSMOCG00000008854) #23	Thg1l (ENSMOCG00000005041) #24	ENSMOCG00000022574	Sox30 (ENSMOCG00000014608) #25	ENSMOCG00000013055 #26	Nipal4 (ENSMOCG00000009893) #27
Murinae	ANCESTRAL SPECIES	7	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l.c	ENSGT00940000159345.l.d	ENSGT00520000062120	ENSGT00940000159345.k.b
Mus	ANCESTRAL SPECIES	2	ENSGT00860000136074	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00860000135873	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l.c	ENSGT00940000159345.l.d	ENSGT00520000062120	ENSGT00940000159345.k.b	ENSGT00940000159345.k.a
Mus_A	ANCESTRAL SPECIES	2	ENSGT00860000136074	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00860000135873	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l.c	ENSGT00940000159345.l.d	ENSGT00520000062120	ENSGT00940000159345.k.b	ENSGT00940000159345.k.a
Mus_B	ANCESTRAL SPECIES	2	ENSGT00860000136074	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00860000135873	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l.c	ENSGT00940000159345.l.d	ENSGT00520000062120	ENSGT00940000159345.k.b	ENSGT00940000159345.k.a
Mouse	MODERN SPECIES	2	Gabra6 (ENSMUSG00000020428)	Gabrb2 (ENSMUSG00000007653) #7	Atp10b (ENSMUSG00000055415) #8	Pttg1 (ENSMUSG00000020415) #9	Slu7 (ENSMUSG00000020409) #10	C1qtnf2 (ENSMUSG00000046491) #12	Ccnjl (ENSMUSG00000044707) #13	Fabp6 (ENSMUSG00000020405) #14	Pwwp2a (ENSMUSG00000044950) #15	Ttc1 (ENSMUSG00000041278) #16	Adra1b (ENSMUSG00000050541) #17	Il12b (ENSMUSG00000004296) #18	Ublcp1 (ENSMUSG00000041231) #19	Rnf145 (ENSMUSG00000019189) #20	Ebf1 (ENSMUSG00000057098) #21	Clint1 (ENSMUSG00000006169) #22	Lsm11 (ENSMUSG00000044847) #23	Thg1l (ENSMUSG00000011254) #24	Sox30 (ENSMUSG00000040489) #25	Gm12166 (ENSMUSG00000069899)	Adam19 (ENSMUSG00000011256)	Nipal4 (ENSMUSG00000020411) #27	Cyfip2 (ENSMUSG00000020340) #29	Fndc9 (ENSMUSG00000048721) #28	Itk (ENSMUSG00000020395) #30	Garin3 (ENSMUSG00000020401) #31	Med7 (ENSMUSG00000020397) #32	Havcr2 (ENSMUSG00000020399) #33	Gm12169 (ENSMUSG00000078924)	BC053393 (ENSMUSG00000046974)	Dppa1 (ENSMUSG00000064010)
Mus_C	ANCESTRAL SPECIES	3	ENSGT00860000136074	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00860000135873	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.l.c	ENSGT00940000159345.l.d	ENSGT00520000062120	ENSGT00940000159345.k.b	ENSGT00940000159345.k.a
spretus	MODERN SPECIES	2	MGP_SPRETEiJ_G0017060	Atp10b (MGP_SPRETEiJ_G0017061) #8	Pttg1 (MGP_SPRETEiJ_G0017062) #9	Slu7 (MGP_SPRETEiJ_G0017063) #10	C1qtnf2 (MGP_SPRETEiJ_G0017064) #12	Ccnjl (MGP_SPRETEiJ_G0017065) #13	MGP_SPRETEiJ_G0017066	Fabp6 (MGP_SPRETEiJ_G0017067) #14	Pwwp2a (MGP_SPRETEiJ_G0017068) #15	Ttc1 (MGP_SPRETEiJ_G0017069) #16	Adra1b (MGP_SPRETEiJ_G0017070) #17	Il12b (MGP_SPRETEiJ_G0017071) #18	Ublcp1 (MGP_SPRETEiJ_G0017072) #19	Rnf145 (MGP_SPRETEiJ_G0017073) #20	Ebf1 (MGP_SPRETEiJ_G0017074) #21	Clint1 (MGP_SPRETEiJ_G0017075) #22	Lsm11 (MGP_SPRETEiJ_G0017076) #23	Thg1l (MGP_SPRETEiJ_G0017077) #24	Sox30 (MGP_SPRETEiJ_G0017078) #25	Adam19 (MGP_SPRETEiJ_G0017079)	Nipal4 (MGP_SPRETEiJ_G0017080) #27	Cyfip2 (MGP_SPRETEiJ_G0017081) #29	Fndc9 (MGP_SPRETEiJ_G0017082) #28	Itk (MGP_SPRETEiJ_G0017083) #30	Garin3 (MGP_SPRETEiJ_G0017084) #31	Med7 (MGP_SPRETEiJ_G0017085) #32	Havcr2 (MGP_SPRETEiJ_G0017086) #33	Gm12169 (MGP_SPRETEiJ_G0017087)	BC053393 (MGP_SPRETEiJ_G0017088)	Dppa1 (MGP_SPRETEiJ_G0017089)	Timd2 (MGP_SPRETEiJ_G0017090)
Steppe mouse	MODERN SPECIES	2745																Clint1 (ENSMSIG00000032206) #22	Lsm11 (ENSMSIG00000032205) #23	Thg1l (ENSMSIG00000032204) #24	ENSMSIG00000032203 #25	Adam19 (ENSMSIG00000032202)	Nipal4 (ENSMSIG00000032201) #27	Fndc9 (ENSMSIG00000032198) #28	Cyfip2 (ENSMSIG00000032197) #29	Itk (ENSMSIG00000032196) #30	Garin3 (ENSMSIG00000032195) #31	Med7 (ENSMSIG00000032194) #32	ENSMSIG00000032193	Havcr2 (ENSMSIG00000032192) #33
Ryukyu mouse	MODERN SPECIES	2	MGP_CAROLIEiJ_G0016219	Atp10b (MGP_CAROLIEiJ_G0016220) #8	Pttg1 (MGP_CAROLIEiJ_G0016221) #9	Slu7 (MGP_CAROLIEiJ_G0016222) #10	C1qtnf2 (MGP_CAROLIEiJ_G0016223) #12	Ccnjl (MGP_CAROLIEiJ_G0016224) #13	MGP_CAROLIEiJ_G0016225	Fabp6 (MGP_CAROLIEiJ_G0016226) #14	Pwwp2a (MGP_CAROLIEiJ_G0016227) #15	Ttc1 (MGP_CAROLIEiJ_G0016228) #16	Adra1b (MGP_CAROLIEiJ_G0016229) #17	Il12b (MGP_CAROLIEiJ_G0016230) #18	Ublcp1 (MGP_CAROLIEiJ_G0016231) #19	Rnf145 (MGP_CAROLIEiJ_G0016232) #20	Ebf1 (MGP_CAROLIEiJ_G0016233) #21	Clint1 (MGP_CAROLIEiJ_G0016234) #22	Lsm11 (MGP_CAROLIEiJ_G0016235) #23	Thg1l (MGP_CAROLIEiJ_G0016236) #24	Sox30 (MGP_CAROLIEiJ_G0016237) #25	Adam19 (MGP_CAROLIEiJ_G0016238)	Nipal4 (MGP_CAROLIEiJ_G0016239) #27	Cyfip2 (MGP_CAROLIEiJ_G0016240) #29	Fndc9 (MGP_CAROLIEiJ_G0016241) #28	Itk (MGP_CAROLIEiJ_G0016242) #30	Garin3 (MGP_CAROLIEiJ_G0016243) #31	Med7 (MGP_CAROLIEiJ_G0016244) #32	Havcr2 (MGP_CAROLIEiJ_G0016245) #33	Gm12169 (MGP_CAROLIEiJ_G0016246)	BC053393 (MGP_CAROLIEiJ_G0016247)	Dppa1 (MGP_CAROLIEiJ_G0016248)	MGP_CAROLIEiJ_G0016249
Shrew mouse	MODERN SPECIES	5	MGP_PahariEiJ_G0017355	Atp10b (MGP_PahariEiJ_G0017356) #8	Pttg1 (MGP_PahariEiJ_G0017357) #9	Slu7 (MGP_PahariEiJ_G0017358) #10	C1qtnf2 (MGP_PahariEiJ_G0017359) #12	Ccnjl (MGP_PahariEiJ_G0017360) #13	MGP_PahariEiJ_G0017361	Fabp6 (MGP_PahariEiJ_G0017362) #14	Pwwp2a (MGP_PahariEiJ_G0017363) #15	Ttc1 (MGP_PahariEiJ_G0017364) #16	Adra1b (MGP_PahariEiJ_G0017365) #17	Il12b (MGP_PahariEiJ_G0017366) #18	Ublcp1 (MGP_PahariEiJ_G0017367) #19	MGP_PahariEiJ_G0017368 #20	Ebf1 (MGP_PahariEiJ_G0017369) #21	Clint1 (MGP_PahariEiJ_G0017370) #22	Lsm11 (MGP_PahariEiJ_G0017371) #23	Thg1l (MGP_PahariEiJ_G0017372) #24	Sox30 (MGP_PahariEiJ_G0017373) #25	Adam19 (MGP_PahariEiJ_G0017374)	Nipal4 (MGP_PahariEiJ_G0017375) #27	Cyfip2 (MGP_PahariEiJ_G0017376) #29	Fndc9 (MGP_PahariEiJ_G0017377) #28	Itk (MGP_PahariEiJ_G0017378) #30	Garin3 (MGP_PahariEiJ_G0017379) #31	Med7 (MGP_PahariEiJ_G0017380) #32	Havcr2 (MGP_PahariEiJ_G0017381) #33	Gm12169 (MGP_PahariEiJ_G0017382)	BC053393 (MGP_PahariEiJ_G0017383)	MGP_PahariEiJ_G0017384	MGP_PahariEiJ_G0017385
Rat	MODERN SPECIES	1	Atp10b (ENSRNOG00000003781) #8	Pttg1 (ENSRNOG00000003802) #9	Slu7 (ENSRNOG00000003822) #10	C1qtnf2 (ENSRNOG00000003870) #12	Ccnjl (ENSRNOG00000003893) #13	Fabp6 (ENSRNOG00000003902) #14	Pwwp2a (ENSRNOG00000003936) #15	ENSRNOG00000064611	Ttc1 (ENSRNOG00000003980) #16	Adra1b (ENSRNOG00000060087) #17	AABR07029470.2 (ENSRNOG00000058024)	Il12b (ENSRNOG00000004380) #18	Ublcp1 (ENSRNOG00000004477) #19	Rnf145 (ENSRNOG00000004602) #20	Ebf1 (ENSRNOG00000028845) #21	Clint1 (ENSRNOG00000005406) #22	Lsm11 (ENSRNOG00000005450) #23	Thg1l (ENSRNOG00000005539) #24	Sox30 (ENSRNOG00000006098) #25	Adam19 (ENSRNOG00000042980) #26	Nipal4 (ENSRNOG00000006255) #27	Cyfip2 (ENSRNOG00000006557) #29	Fndc9 (ENSRNOG00000006549) #28	Itk (ENSRNOG00000006860) #30	Garin3 (ENSRNOG00000021425) #31	Med7 (ENSRNOG00000007053) #32	Havcr2 (ENSRNOG00000031443) #33	LOC100359777 (ENSRNOG00000043422)	LOC689968 (ENSRNOG00000042265)	Dppa1 (ENSRNOG00000043293)	Timd2 (ENSRNOG00000021345)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1382																Clint1 (ENSNGAG00000018688) #22	Lsm11 (ENSNGAG00000015202) #23	Thg1l (ENSNGAG00000012087) #24	Sox30 (ENSNGAG00000011807) #25	ENSNGAG00000010516	ENSNGAG00000019068 #26	Nipal4 (ENSNGAG00000016599) #27	Fndc9 (ENSNGAG00000015896) #28	Cyfip2 (ENSNGAG00000017596) #29	Itk (ENSNGAG00000014445) #30	Garin3 (ENSNGAG00000013566) #31	Med7 (ENSNGAG00000012943) #32	Havcr2 (ENSNGAG00000006466) #33	ENSNGAG00000000622
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	174	Utf1 (ENSJJAG00000020923)	Kndc1 (ENSJJAG00000022611)	Adgra1 (ENSJJAG00000021133)	ENSJJAG00000019509	Nkx6-2 (ENSJJAG00000018842)	Inpp5a (ENSJJAG00000017708)	Pwwp2b (ENSJJAG00000016859)	Lrrc27 (ENSJJAG00000016653)	ENSJJAG00000019198	Stk32c (ENSJJAG00000017030)	Dpysl4 (ENSJJAG00000013066)	Jakmip3 (ENSJJAG00000012161)	Bnip3 (ENSJJAG00000002888)	Ppp2r2d (ENSJJAG00000001485)	Tcerg1l (ENSJJAG00000000675)	ENSJJAG00000000334 #22	ENSJJAG00000023423	Ebf3 (ENSJJAG00000023260) ##21	Mgmt (ENSJJAG00000023187)	Ptpre (ENSJJAG00000022747)	Clrn3 (ENSJJAG00000018824)
Lesser Egyptian jerboa	MODERN SPECIES	63	Slc30a2 (ENSJJAG00000012135)	Trim63 (ENSJJAG00000002973)	Pdik1l (ENSJJAG00000008196)	Zfp593 (ENSJJAG00000006095)	Cep85 (ENSJJAG00000000739)	Sh3bgrl3 (ENSJJAG00000023653)	Fabp6 (ENSJJAG00000012423) #14	Pwwp2a (ENSJJAG00000003162) #15	Ttc1 (ENSJJAG00000002255) #16	Adra1b (ENSJJAG00000001311) #17	ENSJJAG00000000479 #19	ENSJJAG00000004203	ENSJJAG00000010024 #20	ENSJJAG00000000881 #21	ENSJJAG00000003456 #21	ENSJJAG00000012991 #22	Lsm11 (ENSJJAG00000000505) #23	Thg1l (ENSJJAG00000022909) #24	ENSJJAG00000012218 #26	Nipal4 (ENSJJAG00000005123) #27	Fndc9 (ENSJJAG00000015621) #28	Cyfip2 (ENSJJAG00000010781) #29	Itk (ENSJJAG00000021816) #30	Med7 (ENSJJAG00000004613) #32	Sgcd (ENSJJAG00000001165) #34	ENSJJAG00000023400 #34	ENSJJAG00000004371	ENSJJAG00000023424	ENSJJAG00000021436	ENSJJAG00000002404	Trim7 (ENSJJAG00000021609)
Kangaroo rat	MODERN SPECIES	582											Il12b (ENSDORG00000007934) #18	Ublcp1 (ENSDORG00000003901) #19	ENSDORG00000008056 #20	Ebf1 (ENSDORG00000011797) #21	ENSDORG00000026499	Clint1 (ENSDORG00000007567) #22
Lagomorpha	ANCESTRAL SPECIES	3	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Rabbit	MODERN SPECIES	14	SLU7 (ENSOCUG00000011743) #10	FAM200C (ENSOCUG00000033946) #11	C1QTNF2 (ENSOCUG00000011735) #12	CCNJL (ENSOCUG00000005439) #13	FABP6 (ENSOCUG00000005435) #14	PWWP2A (ENSOCUG00000005731) #15	ENSOCUG00000036551	TTC1 (ENSOCUG00000005724) #16	ADRA1B (ENSOCUG00000005721) #17	ENSOCUG00000036332	IL12B (ENSOCUG00000016322) #18	UBLCP1 (ENSOCUG00000002224) #19	RNF145 (ENSOCUG00000009000) #20	EBF1 (ENSOCUG00000008985) #21	ENSOCUG00000016848	CLINT1 (ENSOCUG00000014232) #22	LSM11 (ENSOCUG00000011672) #23	THG1L (ENSOCUG00000001053) #24	ADAM19 (ENSOCUG00000001235) #26	NIPAL4 (ENSOCUG00000001234) #27	FNDC9 (ENSOCUG00000025063) #28	CYFIP2 (ENSOCUG00000011780) #29	ITK (ENSOCUG00000002369) #30	FAM71B (ENSOCUG00000002365) #31	ENSOCUG00000000575	ENSOCUG00000024483	TIMD4 (ENSOCUG00000011915)	SGCD (ENSOCUG00000002000) #34	ENSOCUG00000024368	ENSOCUG00000024002	MRPL22 (ENSOCUG00000011189) #35
Pika	MODERN SPECIES	579																CLINT1 (ENSOPRG00000013817) #22	LSM11 (ENSOPRG00000013785) #23	THG1L (ENSOPRG00000013774) #24	SOX30 (ENSOPRG00000013760) #25
Primates	ANCESTRAL SPECIES	8	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00390000009693.n #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000009693.n #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281.g #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.p	ENSGT00940000161609	ENSGT00940000158509 #34
Hominidae	ANCESTRAL SPECIES	7	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281.g #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.p	ENSGT00940000161609	ENSGT00390000004757.`b.b.b.d
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139.i #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281.g #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.p	ENSGT00940000161609	ENSGT00390000004757.`b.b.b.d
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139.i #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281.h #20	ENSGT00390000017762	ENSGT00940000157281.g #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.p	ENSGT00940000161609	ENSGT00390000004757.`b.b.b.d
Pan	ANCESTRAL SPECIES	10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139.i #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281.h #20	ENSGT00390000017762	ENSGT00940000157281.g #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.p	ENSGT00940000161609	ENSGT00390000004757.`b.b.b.d
Chimpanzee	MODERN SPECIES	18	SLU7 (ENSPTRG00000017491) #10	FAM200C (ENSPTRG00000042098) #11	C1QTNF2 (ENSPTRG00000017489) #12	ENSPTRG00000046075	CCNJL (ENSPTRG00000017488) #13	FABP6 (ENSPTRG00000017487) #14	PWWP2A (ENSPTRG00000017486) #15	TTC1 (ENSPTRG00000017484) #16	ADRA1B (ENSPTRG00000017482) #17	IL12B (ENSPTRG00000017481) #18	UBLCP1 (ENSPTRG00000017480) #19	RNF145 (ENSPTRG00000017479) #20	EBF1 (ENSPTRG00000017477) #21	ENSPTRG00000042059	ENSPTRG00000028515	CLINT1 (ENSPTRG00000052146) #22	LSM11 (ENSPTRG00000017474) #23	THG1L (ENSPTRG00000017473) #24	C5H5orf52 (ENSPTRG00000017472)	SOX30 (ENSPTRG00000017471) #25	ADAM19 (ENSPTRG00000017470) #26	NIPAL4 (ENSPTRG00000017469) #27	FNDC9 (ENSPTRG00000041848) #28	CYFIP2 (ENSPTRG00000017465) #29	ITK (ENSPTRG00000017464) #30	GARIN3 (ENSPTRG00000017463) #31	MED7 (ENSPTRG00000017462) #32	HAVCR2 (ENSPTRG00000017461) #33	HAVCR1 (ENSPTRG00000017459)	TIMD4 (ENSPTRG00000017458)	PPP1R2B (ENSPTRG00000043249)
Bonobo	MODERN SPECIES	18	SLU7 (ENSPPAG00000032717) #10	FAM200C (ENSPPAG00000009361) #11	C1QTNF2 (ENSPPAG00000038286) #12	ENSPPAG00000030618	CCNJL (ENSPPAG00000039661) #13	ENSPPAG00000042064 #14	PWWP2A (ENSPPAG00000029086) #15	TTC1 (ENSPPAG00000043697) #16	ADRA1B (ENSPPAG00000041419) #17	IL12B (ENSPPAG00000037071) #18	UBLCP1 (ENSPPAG00000031061) #19	ENSPPAG00000009096 #20	ENSPPAG00000010576	EBF1 (ENSPPAG00000015552) #21	ENSPPAG00000038620	CLINT1 (ENSPPAG00000033967) #22	ENSPPAG00000019327 #23	THG1L (ENSPPAG00000042438) #24	C5orf52 (ENSPPAG00000039111)	SOX30 (ENSPPAG00000042889) #25	ADAM19 (ENSPPAG00000032090) #26	NIPAL4 (ENSPPAG00000029722) #27	CYFIP2 (ENSPPAG00000042023) #29	ITK (ENSPPAG00000031516) #30	GARIN3 (ENSPPAG00000032420) #31	MED7 (ENSPPAG00000025746) #32	HAVCR2 (ENSPPAG00000026219) #33	ENSPPAG00000033621	TIMD4 (ENSPPAG00000025225)	SGCD (ENSPPAG00000027674) #34	MRPL22 (ENSPPAG00000027082) #35
Human	MODERN SPECIES	17	GABRB2 (ENSG00000145864) #7	ATP10B (ENSG00000118322) #8	PTTG1 (ENSG00000164611) #9	SLU7 (ENSG00000164609) #10	FAM200C (ENSG00000221886) #11	C1QTNF2 (ENSG00000145861) #12	CCNJL (ENSG00000135083) #13	FABP6 (ENSG00000170231) #14	PWWP2A (ENSG00000170234) #15	TTC1 (ENSG00000113312) #16	ADRA1B (ENSG00000170214) #17	IL12B (ENSG00000113302) #18	UBLCP1 (ENSG00000164332) #19	RNF145 (ENSG00000145860) #20	EBF1 (ENSG00000164330) #21	CLINT1 (ENSG00000113282) #22	LSM11 (ENSG00000155858) #23	THG1L (ENSG00000113272) #24	C5orf52 (ENSG00000187658)	SOX30 (ENSG00000039600) #25	NIPAL4 (ENSG00000172548) #27	ADAM19 (ENSG00000135074) #26	FNDC9 (ENSG00000172568) #28	ENSG00000285868	CYFIP2 (ENSG00000055163) #29	GARIN3 (ENSG00000170613) #31	ITK (ENSG00000113263) #30	MED7 (ENSG00000155868) #32	HAVCR2 (ENSG00000135077) #33	HAVCR1 (ENSG00000113249)	TIMD4 (ENSG00000145850)
Gorilla	MODERN SPECIES	18	SLU7 (ENSGGOG00000005591) #10	FAM200C (ENSGGOG00000015371) #11	C1QTNF2 (ENSGGOG00000005719) #12	ENSGGOG00000043342	ENSGGOG00000004645 #13	ENSGGOG00000004642 #14	PWWP2A (ENSGGOG00000001181) #15	TTC1 (ENSGGOG00000001179) #16	ADRA1B (ENSGGOG00000001969) #17	IL12B (ENSGGOG00000004419) #18	UBLCP1 (ENSGGOG00000014527) #19	RNF145 (ENSGGOG00000023385) #20	ENSGGOG00000004151	EBF1 (ENSGGOG00000000033) #21	ENSGGOG00000023556	CLINT1 (ENSGGOG00000008481) #22	LSM11 (ENSGGOG00000008672) #23	THG1L (ENSGGOG00000008668) #24	C5orf52 (ENSGGOG00000010030)	SOX30 (ENSGGOG00000025241) #25	ADAM19 (ENSGGOG00000014156) #26	NIPAL4 (ENSGGOG00000014146) #27	FNDC9 (ENSGGOG00000012060) #28	CYFIP2 (ENSGGOG00000012019) #29	ITK (ENSGGOG00000003614) #30	GARIN3 (ENSGGOG00000008998) #31	MED7 (ENSGGOG00000002565) #32	HAVCR2 (ENSGGOG00000023106) #33	ENSGGOG00000008871	ENSGGOG00000015766	SGCD (ENSGGOG00000008121) #34
Orangutan	MODERN SPECIES	18	SLU7 (ENSPPYG00000016008) #10	FAM200C (ENSPPYG00000016007) #11	C1QTNF2 (ENSPPYG00000036992) #12	ENSPPYG00000032746	ENSPPYG00000016005 #13	FABP6 (ENSPPYG00000016004) #14	ENSPPYG00000016003 #15	ENSPPYG00000038606	TTC1 (ENSPPYG00000016002) #16	ADRA1B (ENSPPYG00000016001) #17	IL12B (ENSPPYG00000016000) #18	UBLCP1 (ENSPPYG00000015999) #19	RNF145 (ENSPPYG00000015998) #20	ENSPPYG00000015996	EBF1 (ENSPPYG00000015995) #21	CLINT1 (ENSPPYG00000015994) #22	LSM11 (ENSPPYG00000029792) #23	THG1L (ENSPPYG00000015993) #24	ENSPPYG00000015992	SOX30 (ENSPPYG00000031159) #25	ENSPPYG00000015991	NIPAL4 (ENSPPYG00000037418) #27	ENSPPYG00000034139	FNDC9 (ENSPPYG00000015988) #28	CYFIP2 (ENSPPYG00000015987) #29	ITK (ENSPPYG00000015986) #30	GARIN3 (ENSPPYG00000015985) #31	ENSPPYG00000015984 #32	ENSPPYG00000015983	TIMD4 (ENSPPYG00000015982)	PPP1R2B (ENSPPYG00000025928)
Gibbon	MODERN SPECIES	11	PTTG1 (ENSNLEG00000004396) #9	SLU7 (ENSNLEG00000004355) #10	FAM200C (ENSNLEG00000018765) #11	C1QTNF2 (ENSNLEG00000031564) #12	ENSNLEG00000032973	CCNJL (ENSNLEG00000004343) #13	ENSNLEG00000004336 #14	PWWP2A (ENSNLEG00000018764) #15	TTC1 (ENSNLEG00000004317) #16	ENSNLEG00000004316 #17	IL12B (ENSNLEG00000004287) #18	UBLCP1 (ENSNLEG00000004270) #19	RNF145 (ENSNLEG00000004241) #20	EBF1 (ENSNLEG00000004218) #21	ENSNLEG00000004216	CLINT1 (ENSNLEG00000004186) #22	LSM11 (ENSNLEG00000004178) #23	THG1L (ENSNLEG00000004166) #24	ENSNLEG00000027951	SOX30 (ENSNLEG00000004158) #25	ADAM19 (ENSNLEG00000004135) #26	NIPAL4 (ENSNLEG00000004132) #27	CYFIP2 (ENSNLEG00000003979) #29	FNDC9 (ENSNLEG00000004128) #28	ITK (ENSNLEG00000003943) #30	GARIN3 (ENSNLEG00000003940) #31	MED7 (ENSNLEG00000003939) #32	HAVCR2 (ENSNLEG00000003917) #33	ENSNLEG00000028009	TIMD4 (ENSNLEG00000003890)	ENSNLEG00000003889
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00390000009693.n #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00390000009693.n #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Vervet Monkey	MODERN SPECIES	15	GABRB2 (ENSCSAG00000010344) #7	ATP10B (ENSCSAG00000010352) #8	ENSCSAG00000010369 #9	SLU7 (ENSCSAG00000010383) #10	FAM200C (ENSCSAG00000019723) #11	C1QTNF2 (ENSCSAG00000010387) #12	CCNJL (ENSCSAG00000010391) #13	FABP6 (ENSCSAG00000010396) #14	PWWP2A (ENSCSAG00000010404) #15	TTC1 (ENSCSAG00000010420) #16	ADRA1B (ENSCSAG00000010426) #17	IL12B (ENSCSAG00000010459) #18	UBLCP1 (ENSCSAG00000010476) #19	RNF145 (ENSCSAG00000010489) #20	EBF1 (ENSCSAG00000010520) #21	CLINT1 (ENSCSAG00000010545) #22	LSM11 (ENSCSAG00000010556) #23	ENSCSAG00000010563	THG1L (ENSCSAG00000010572) #24	SOX30 (ENSCSAG00000010596) #25	ADAM19 (ENSCSAG00000010615) #26	NIPAL4 (ENSCSAG00000010642) #27	FNDC9 (ENSCSAG00000019722) #28	CYFIP2 (ENSCSAG00000010668) #29	ITK (ENSCSAG00000010692) #30	GARIN3 (ENSCSAG00000010701) #31	MED7 (ENSCSAG00000019721) #32	HAVCR2 (ENSCSAG00000010708) #33	HAVCR1 (ENSCSAG00000010724)	TIMD4 (ENSCSAG00000010730)	SGCD (ENSCSAG00000010741) #34
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00960000186777	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000009693.n #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00960000186777	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Pig-tailed macaque	MODERN SPECIES	581	C1QTNF2 (ENSMNEG00000030599) #12	ENSMNEG00000036332	CCNJL (ENSMNEG00000028285) #13	ENSMNEG00000032357	FABP6 (ENSMNEG00000042984) #14	PWWP2A (ENSMNEG00000040509) #15	TTC1 (ENSMNEG00000043439) #16	ADRA1B (ENSMNEG00000034660) #17	IL12B (ENSMNEG00000033711) #18	UBLCP1 (ENSMNEG00000029679) #19	RNF145 (ENSMNEG00000036090) #20	ENSMNEG00000006972	EBF1 (ENSMNEG00000031614) #21	ENSMNEG00000041280	ENSMNEG00000031691	CLINT1 (ENSMNEG00000034378) #22	ENSMNEG00000039267	LSM11 (ENSMNEG00000045265) #23	THG1L (ENSMNEG00000038597) #24	C5orf52 (ENSMNEG00000037458)	SOX30 (ENSMNEG00000034013) #25	ADAM19 (ENSMNEG00000043474) #26	NIPAL4 (ENSMNEG00000034144) #27	CYFIP2 (ENSMNEG00000039378) #29	FNDC9 (ENSMNEG00000038568) #28	ITK (ENSMNEG00000014666) #30	GARIN3 (ENSMNEG00000041469) #31	MED7 (ENSMNEG00000014130) #32	HAVCR2 (ENSMNEG00000041311) #33	HAVCR1 (ENSMNEG00000033421)	ENSMNEG00000038633
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00940000159531 #8	ENSGT00390000009693.n #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT01030000240088	ENSGT01100000263539.b.a.a.a.a.a.a.b.a.c.a	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609
Rhesus	MODERN SPECIES	16	PTTG1 (ENSMMUG00000023077) #9	SLU7 (ENSMMUG00000023075) #10	FAM200C (ENSMMUG00000023074) #11	ENSMMUG00000056678	C1QTNF2 (ENSMMUG00000015219) #12	CCNJL (ENSMMUG00000023073) #13	FABP6 (ENSMMUG00000023072) #14	PWWP2A (ENSMMUG00000011472) #15	TTC1 (ENSMMUG00000011471) #16	ADRA1B (ENSMMUG00000050043) #17	IL12B (ENSMMUG00000021701) #18	UBLCP1 (ENSMMUG00000021700) #19	RNF145 (ENSMMUG00000021699) #20	EBF1 (ENSMMUG00000021696) #21	ENSMMUG00000062861	CLINT1 (ENSMMUG00000002272) #22	LSM11 (ENSMMUG00000052188) #23	THG1L (ENSMMUG00000050641) #24	ENSMMUG00000060179	ENSMMUG00000049641	SOX30 (ENSMMUG00000021550) #25	ADAM19 (ENSMMUG00000021549) #26	NIPAL4 (ENSMMUG00000021548) #27	FNDC9 (ENSMMUG00000011007) #28	CYFIP2 (ENSMMUG00000010997) #29	ITK (ENSMMUG00000010995) #30	GARIN3 (ENSMMUG00000010994) #31	MED7 (ENSMMUG00000010993) #32	ENSMMUG00000060123	HAVCR2 (ENSMMUG00000048691) #33	TIMD4 (ENSMMUG00000060867)
Crab-eating macaque	MODERN SPECIES	16	ENSMFAG00000062368	ATP10B (ENSMFAG00000045373) #8	PTTG1 (ENSMFAG00000036180) #9	SLU7 (ENSMFAG00000002001) #10	FAM200C (ENSMFAG00000017692) #11	CCNJL (ENSMFAG00000002131) #13	FABP6 (ENSMFAG00000002028) #14	PWWP2A (ENSMFAG00000027720) #15	TTC1 (ENSMFAG00000040270) #16	ADRA1B (ENSMFAG00000045077) #17	IL12B (ENSMFAG00000036061) #18	UBLCP1 (ENSMFAG00000045929) #19	RNF145 (ENSMFAG00000002232) #20	EBF1 (ENSMFAG00000034539) #21	ENSMFAG00000063064	CLINT1 (ENSMFAG00000039041) #22	LSM11 (ENSMFAG00000034084) #23	THG1L (ENSMFAG00000041928) #24	ENSMFAG00000061135	ENSMFAG00000051588	SOX30 (ENSMFAG00000029536) #25	ADAM19 (ENSMFAG00000034190) #26	NIPAL4 (ENSMFAG00000029978) #27	FNDC9 (ENSMFAG00000009168) #28	CYFIP2 (ENSMFAG00000036175) #29	ITK (ENSMFAG00000000719) #30	ENSMFAG00000049581	GARIN3 (ENSMFAG00000034384) #31	MED7 (ENSMFAG00000029781) #32	HAVCR2 (ENSMFAG00000036143) #33	HAVCR1 (ENSMFAG00000039778)
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00960000186777	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Olive baboon	MODERN SPECIES	15	ENSPANG00000043144	ENSPANG00000041430 #14	PWWP2A (ENSPANG00000013257) #15	TTC1 (ENSPANG00000005268) #16	ENSPANG00000047078	ADRA1B (ENSPANG00000045795) #17	ENSPANG00000038121	ENSPANG00000047994	ENSPANG00000042644	IL12B (ENSPANG00000000116) #18	UBLCP1 (ENSPANG00000045762) #19	RNF145 (ENSPANG00000003367) #20	ENSPANG00000044981	EBF1 (ENSPANG00000010656) #21	ENSPANG00000045969	CLINT1 (ENSPANG00000013184) #22	ENSPANG00000031558 #23	THG1L (ENSPANG00000039425) #24	ENSPANG00000038991	C5orf52 (ENSPANG00000048757)	SOX30 (ENSPANG00000026421) #25	ADAM19 (ENSPANG00000011296) #26	NIPAL4 (ENSPANG00000013719) #27	FNDC9 (ENSPANG00000017073) #28	CYFIP2 (ENSPANG00000006207) #29	ITK (ENSPANG00000007090) #30	GARIN3 (ENSPANG00000003197) #31	MED7 (ENSPANG00000009343) #32	HAVCR2 (ENSPANG00000008124) #33	HAVCR1 (ENSPANG00000013258)	TIMD4 (ENSPANG00000008704)
Cercopithecinae_d	ANCESTRAL SPECIES	53	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00960000186777	ENSGT00390000012916.h.a.b	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000010721.a.a.b	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000013443.c.e.a.b	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Sooty mangabey	MODERN SPECIES	597	FAM200C (ENSCATG00000022751) #11	C1QTNF2 (ENSCATG00000032219) #12	ENSCATG00000008381	ENSCATG00000043862	CCNJL (ENSCATG00000039008) #13	FABP6 (ENSCATG00000042327) #14	PWWP2A (ENSCATG00000032682) #15	TTC1 (ENSCATG00000043553) #16	ADRA1B (ENSCATG00000043853) #17	ENSCATG00000005901	IL12B (ENSCATG00000035975) #18	UBLCP1 (ENSCATG00000032405) #19	RNF145 (ENSCATG00000042232) #20	EBF1 (ENSCATG00000041829) #21	ENSCATG00000044006	CLINT1 (ENSCATG00000031499) #22	LSM11 (ENSCATG00000042524) #23	THG1L (ENSCATG00000040510) #24	C5orf52 (ENSCATG00000040595)	SOX30 (ENSCATG00000043607) #25	ADAM19 (ENSCATG00000032288) #26	NIPAL4 (ENSCATG00000038298) #27	FNDC9 (ENSCATG00000022553) #28	CYFIP2 (ENSCATG00000037141) #29	ITK (ENSCATG00000031267) #30	GARIN3 (ENSCATG00000033615) #31	MED7 (ENSCATG00000023094) #32	HAVCR2 (ENSCATG00000035422) #33	HAVCR1 (ENSCATG00000018304)	TIMD4 (ENSCATG00000028879)	SGCD (ENSCATG00000045363) #34
Drill	MODERN SPECIES	1506	SLU7 (ENSMLEG00000037647) #10	FAM200C (ENSMLEG00000000481) #11	C1QTNF2 (ENSMLEG00000039438) #12	ENSMLEG00000032350	CCNJL (ENSMLEG00000043216) #13	FABP6 (ENSMLEG00000039832) #14	PWWP2A (ENSMLEG00000043117) #15	TTC1 (ENSMLEG00000043939) #16	ADRA1B (ENSMLEG00000037875) #17	ENSMLEG00000027859	IL12B (ENSMLEG00000033746) #18	UBLCP1 (ENSMLEG00000033543) #19	RNF145 (ENSMLEG00000031957) #20	EBF1 (ENSMLEG00000036042) #21	ENSMLEG00000041026	CLINT1 (ENSMLEG00000028093) #22	LSM11 (ENSMLEG00000027420) #23	THG1L (ENSMLEG00000025109) #24	C5orf52 (ENSMLEG00000019571)	SOX30 (ENSMLEG00000037153) #25	ENSMLEG00000031612	ADAM19 (ENSMLEG00000034880) #26	NIPAL4 (ENSMLEG00000041361) #27	CYFIP2 (ENSMLEG00000031854) #29	FNDC9 (ENSMLEG00000023465) #28	ITK (ENSMLEG00000041825) #30	GARIN3 (ENSMLEG00000021576) #31	MED7 (ENSMLEG00000020476) #32	HAVCR2 (ENSMLEG00000035212) #33	HAVCR1 (ENSMLEG00000005114)	TIMD4 (ENSMLEG00000034086)
Rhinopithecus	ANCESTRAL SPECIES	303													ENSGT00390000013443.c.e.a.b	ENSGT00550000074828.a.g.a.g.b	ENSGT00870000137463	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Golden snub-nosed monkey	MODERN SPECIES	1079														ENSRROG00000032980	ENSRROG00000032075	CLINT1 (ENSRROG00000031281) #22	ENSRROG00000043493	LSM11 (ENSRROG00000013405) #23	THG1L (ENSRROG00000045380) #24	C5orf52 (ENSRROG00000027583)	SOX30 (ENSRROG00000028754) #25	ADAM19 (ENSRROG00000008888) #26	NIPAL4 (ENSRROG00000024060) #27	CYFIP2 (ENSRROG00000039047) #29	FNDC9 (ENSRROG00000024905) #28	ITK (ENSRROG00000036802) #30	GARIN3 (ENSRROG00000042231) #31	MED7 (ENSRROG00000025348) #32	HAVCR2 (ENSRROG00000028819) #33
Black snub-nosed monkey	MODERN SPECIES	158														ENSRBIG00000029975	ENSRBIG00000042824	CLINT1 (ENSRBIG00000028713) #22	ENSRBIG00000035668	LSM11 (ENSRBIG00000040079) #23	THG1L (ENSRBIG00000037537) #24	C5orf52 (ENSRBIG00000042451)	SOX30 (ENSRBIG00000029511) #25	ADAM19 (ENSRBIG00000032143) #26	NIPAL4 (ENSRBIG00000025037) #27
Platyrrhini	ANCESTRAL SPECIES	19	ENSGT00940000159531 #8	ENSGT00390000009693.o.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT01050000248309	ENSGT00940000154863.db.a.b	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B.c #32	ENSGT00940000154444.A #33	ENSGT00940000156018.B
Cebidae	ANCESTRAL SPECIES	24	ENSGT00940000159531 #8	ENSGT00390000009693.o.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00390000017762	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT01050000248309	ENSGT00940000154863.db.a.b	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B.c #32	ENSGT00940000154444.A #33	ENSGT00940000156018.B
Marmoset	MODERN SPECIES	11	FAM200C (ENSCJAG00000022257) #11	C1QTNF2 (ENSCJAG00000019125) #12	CCNJL (ENSCJAG00000019119) #13	ENSCJAG00000019114 #14	ENSCJAG00000059463	TTC1 (ENSCJAG00000019084) #16	PWWP2A (ENSCJAG00000019106) #15	ENSCJAG00000087312	ADRA1B (ENSCJAG00000019081) #17	IL12B (ENSCJAG00000019062) #18	UBLCP1 (ENSCJAG00000019057) #19	RNF145 (ENSCJAG00000019025) #20	ENSCJAG00000064283	EBF1 (ENSCJAG00000019016) #21	ENSCJAG00000085744	CLINT1 (ENSCJAG00000018990) #22	LSM11 (ENSCJAG00000018985) #23	THG1L (ENSCJAG00000018973) #24	ENSCJAG00000070781	ENSCJAG00000085532	C5orf52 (ENSCJAG00000018969)	SOX30 (ENSCJAG00000018960) #25	NIPAL4 (ENSCJAG00000018926) #27	ADAM19 (ENSCJAG00000018932) #26	FNDC9 (ENSCJAG00000068975) #28	ENSCJAG00000056918	CYFIP2 (ENSCJAG00000018862) #29	ITK (ENSCJAG00000018825) #30	GARIN3 (ENSCJAG00000018822) #31	MED7 (ENSCJAG00000018815) #32	HAVCR2 (ENSCJAG00000018791) #33
Cebidae_a	ANCESTRAL SPECIES	19	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693.o.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00390000011578	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT01050000248309	ENSGT00940000154863.db.a.b	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B.c #32	ENSGT00940000154444.A #33	ENSGT00940000156018.B	ENSGT00390000017551
Bolivian squirrel monkey	MODERN SPECIES	109	ENSSBOG00000012956 #9	SLU7 (ENSSBOG00000003225) #10	FAM200C (ENSSBOG00000018847) #11	C1QTNF2 (ENSSBOG00000032053) #12	CCNJL (ENSSBOG00000022971) #13	FABP6 (ENSSBOG00000024801) #14	ENSSBOG00000008426	PWWP2A (ENSSBOG00000025619) #15	TTC1 (ENSSBOG00000030335) #16	ADRA1B (ENSSBOG00000023488) #17	IL12B (ENSSBOG00000025424) #18	UBLCP1 (ENSSBOG00000022274) #19	RNF145 (ENSSBOG00000034936) #20	EBF1 (ENSSBOG00000027616) #21	ENSSBOG00000022000	CLINT1 (ENSSBOG00000025062) #22	LSM11 (ENSSBOG00000020709) #23	THG1L (ENSSBOG00000024790) #24	C5orf52 (ENSSBOG00000027715)	SOX30 (ENSSBOG00000020019) #25	ADAM19 (ENSSBOG00000006447) #26	NIPAL4 (ENSSBOG00000030733) #27	CYFIP2 (ENSSBOG00000026343) #29	ENSSBOG00000025819	ENSSBOG00000029539	ITK (ENSSBOG00000029041) #30	GARIN3 (ENSSBOG00000024328) #31	ENSSBOG00000017937 #32	HAVCR2 (ENSSBOG00000029757) #33	IQCE (ENSSBOG00000034465)	BRAT1 (ENSSBOG00000036111)
Mas night monkey	MODERN SPECIES	875																CLINT1 (ENSANAG00000032232) #22	LSM11 (ENSANAG00000028926) #23	ENSANAG00000025715 #24	SOX30 (ENSANAG00000028610) #25	ADAM19 (ENSANAG00000028302) #26	NIPAL4 (ENSANAG00000023969) #27	ENSANAG00000034676	ENSANAG00000024317	CYFIP2 (ENSANAG00000036706) #29	ITK (ENSANAG00000027341) #30	GARIN3 (ENSANAG00000022079) #31	MED7 (ENSANAG00000019281) #32	HAVCR2 (ENSANAG00000030030) #33	IQCE (ENSANAG00000026044)	BRAT1 (ENSANAG00000019212)	AMZ1 (ENSANAG00000029952)
Tarsier	MODERN SPECIES	3844																CLINT1 (ENSTSYG00000008022) #22	LSM11 (ENSTSYG00000001535) #23	THG1L (ENSTSYG00000001547) #24	SOX30 (ENSTSYG00000005381) #25	ADAM19 (ENSTSYG00000006366) #26	NIPAL4 (ENSTSYG00000035349) #27	CYFIP2 (ENSTSYG00000013042) #29	ITK (ENSTSYG00000002118) #30
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Lemuriformes	ANCESTRAL SPECIES	21	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Mouse lemur	MODERN SPECIES	15	ATP10B (ENSMICG00000006366) #8	ENSMICG00000006363 #9	SLU7 (ENSMICG00000031781) #10	FAM200C (ENSMICG00000006362) #11	C1QTNF2 (ENSMICG00000036878) #12	CCNJL (ENSMICG00000044518) #13	FABP6 (ENSMICG00000003251) #14	PWWP2A (ENSMICG00000003248) #15	TTC1 (ENSMICG00000003241) #16	ADRA1B (ENSMICG00000043682) #17	IL12B (ENSMICG00000010066) #18	UBLCP1 (ENSMICG00000047506) #19	ENSMICG00000047569	RNF145 (ENSMICG00000010048) #20	EBF1 (ENSMICG00000010036) #21	CLINT1 (ENSMICG00000001037) #22	LSM11 (ENSMICG00000048032) #23	THG1L (ENSMICG00000038734) #24	SOX30 (ENSMICG00000001020) #25	ADAM19 (ENSMICG00000001011) #26	NIPAL4 (ENSMICG00000001010) #27	CYFIP2 (ENSMICG00000004742) #29	ITK (ENSMICG00000027422) #30	GARIN3 (ENSMICG00000044215) #31	MED7 (ENSMICG00000002539) #32	HAVCR2 (ENSMICG00000001001) #33	ENSMICG00000044152	TIMD4 (ENSMICG00000000994)	SGCD (ENSMICG00000003017) #34	ENSMICG00000034516	MRPL22 (ENSMICG00000029267) #35
Lemuriformes_a	ANCESTRAL SPECIES	102	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Coquerels sifaka	MODERN SPECIES	455																CLINT1 (ENSPCOG00000017294) #22	LSM11 (ENSPCOG00000017959) #23	THG1L (ENSPCOG00000028595) #24	SOX30 (ENSPCOG00000014531) #25	ADAM19 (ENSPCOG00000014653) #26	NIPAL4 (ENSPCOG00000013738) #27	CYFIP2 (ENSPCOG00000028696) #29	ITK (ENSPCOG00000028726) #30	GARIN3 (ENSPCOG00000017662) #31	MED7 (ENSPCOG00000026403) #32	HAVCR2 (ENSPCOG00000013600) #33	ENSPCOG00000019920	ENSPCOG00000022028	SGCD (ENSPCOG00000017069) #34
Greater bamboo lemur	MODERN SPECIES	132	ATP10B (ENSPSMG00000005850) #8	ENSPSMG00000005873 #9	SLU7 (ENSPSMG00000005902) #10	FAM200C (ENSPSMG00000005938) #11	C1QTNF2 (ENSPSMG00000005948) #12	CCNJL (ENSPSMG00000005972) #13	PWWP2A (ENSPSMG00000006002) #15	TTC1 (ENSPSMG00000006011) #16	ADRA1B (ENSPSMG00000006018) #17	IL12B (ENSPSMG00000006026) #18	UBLCP1 (ENSPSMG00000006043) #19	RNF145 (ENSPSMG00000006074) #20	EBF1 (ENSPSMG00000006123) #21	ENSPSMG00000006144	ENSPSMG00000006147	CLINT1 (ENSPSMG00000006177) #22	LSM11 (ENSPSMG00000006204) #23	THG1L (ENSPSMG00000006213) #24	SOX30 (ENSPSMG00000006219) #25	ADAM19 (ENSPSMG00000006256) #26	NIPAL4 (ENSPSMG00000006264) #27	CYFIP2 (ENSPSMG00000006690) #29	FNDC9 (ENSPSMG00000007141) #28	ITK (ENSPSMG00000007151) #30	GARIN3 (ENSPSMG00000007162) #31	MED7 (ENSPSMG00000007175) #32	HAVCR2 (ENSPSMG00000007187) #33	ENSPSMG00000007195	TIMD4 (ENSPSMG00000007225)	SGCD (ENSPSMG00000007233) #34	ENSPSMG00000007246
Bushbaby	MODERN SPECIES	118	ATP10B (ENSOGAG00000012969) #8	ENSOGAG00000012307 #9	SLU7 (ENSOGAG00000012301) #10	FAM200C (ENSOGAG00000012300) #11	C1QTNF2 (ENSOGAG00000012298) #12	CCNJL (ENSOGAG00000012297) #13	FABP6 (ENSOGAG00000032635) #14	ENSOGAG00000009944	PWWP2A (ENSOGAG00000024953) #15	TTC1 (ENSOGAG00000016342) #16	ADRA1B (ENSOGAG00000032072) #17	IL12B (ENSOGAG00000014011) #18	UBLCP1 (ENSOGAG00000014005) #19	RNF145 (ENSOGAG00000014001) #20	EBF1 (ENSOGAG00000013992) #21	CLINT1 (ENSOGAG00000028460) #22	LSM11 (ENSOGAG00000009059) #23	THG1L (ENSOGAG00000009057) #24	ENSOGAG00000025029	SOX30 (ENSOGAG00000009055) #25	ENSOGAG00000032792	ADAM19 (ENSOGAG00000006295) #26	NIPAL4 (ENSOGAG00000016545) #27	CYFIP2 (ENSOGAG00000016540) #29	FNDC9 (ENSOGAG00000011221) #28	ITK (ENSOGAG00000016539) #30	ENSOGAG00000030984	GARIN3 (ENSOGAG00000005476) #31	MED7 (ENSOGAG00000005475) #32	HAVCR2 (ENSOGAG00000005472) #33	ENSOGAG00000005467
Laurasiatheria	ANCESTRAL SPECIES	8	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT00940000155650 #22
Common shrew	MODERN SPECIES	1027																CLINT1 (ENSSARG00000006099) #22
Laurasiatheria_a	ANCESTRAL SPECIES	9	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Artiodactyla	ANCESTRAL SPECIES	8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Suina	ANCESTRAL SPECIES	25	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Chacoan peccary	MODERN SPECIES	97	ATP10B (ENSCWAG00000003280) #8	ENSCWAG00000003355 #9	SLU7 (ENSCWAG00000003364) #10	FAM200C (ENSCWAG00000003381) #11	C1QTNF2 (ENSCWAG00000003388) #12	CCNJL (ENSCWAG00000003396) #13	FABP6 (ENSCWAG00000003401) #14	PWWP2A (ENSCWAG00000003411) #15	TTC1 (ENSCWAG00000003419) #16	ADRA1B (ENSCWAG00000003423) #17	IL12B (ENSCWAG00000003428) #18	UBLCP1 (ENSCWAG00000003434) #19	RNF145 (ENSCWAG00000003440) #20	EBF1 (ENSCWAG00000003463) #21	ENSCWAG00000003489	CLINT1 (ENSCWAG00000003496) #22	LSM11 (ENSCWAG00000003513) #23	THG1L (ENSCWAG00000003519) #24	SOX30 (ENSCWAG00000003538) #25	ENSCWAG00000003570	ADAM19 (ENSCWAG00000003580) #26	NIPAL4 (ENSCWAG00000003616) #27	CYFIP2 (ENSCWAG00000003746) #29	FNDC9 (ENSCWAG00000006309) #28	ITK (ENSCWAG00000006326) #30	ENSCWAG00000006406	GARIN3 (ENSCWAG00000006421) #31	MED7 (ENSCWAG00000006465) #32	ENSCWAG00000006481 #33	ENSCWAG00000006531	ENSCWAG00000006550
Pig	MODERN SPECIES	7	ATP10B (ENSSSCG00000021527) #8	ENSSSCG00000017032 #9	SLU7 (ENSSSCG00000017033) #10	FAM200C (ENSSSCG00000038662) #11	C1QTNF2 (ENSSSCG00000035993) #12	CCNJL (ENSSSCG00000017036) #13	FABP6 (ENSSSCG00000017037) #14	ENSSSCG00000017038 #15	TTC1 (ENSSSCG00000040528) #16	ADRA1B (ENSSSCG00000017041) #17	IL12B (ENSSSCG00000017044) #18	UBLCP1 (ENSSSCG00000017042) #19	RNF145 (ENSSSCG00000017043) #20	EBF1 (ENSSSCG00000017046) #21	ENSSSCG00000048797	CLINT1 (ENSSSCG00000017047) #22	LSM11 (ENSSSCG00000038248) #23	THG1L (ENSSSCG00000036047) #24	SOX30 (ENSSSCG00000017051) #25	ADAM19 (ENSSSCG00000017052) #26	NIPAL4 (ENSSSCG00000017053) #27	CYFIP2 (ENSSSCG00000017054) #29	FNDC9 (ENSSSCG00000017055) #28	ITK (ENSSSCG00000038003) #30	GARIN3 (ENSSSCG00000017057) #31	MED7 (ENSSSCG00000017058) #32	HAVCR2 (ENSSSCG00000028875) #33	ENSSSCG00000017061	TIMD4 (ENSSSCG00000017062)	SGCD (ENSSSCG00000058577) #34	ENSSSCG00000041811
Artiodactyla_a	ANCESTRAL SPECIES	7	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Artiodactyla_b	ANCESTRAL SPECIES	8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Cetacea	ANCESTRAL SPECIES	1	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00940000169007	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00390000010799.u.b.a.a.b	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000016769.k	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00390000010799.u.b.a.a.b	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000016769.k	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000016769.k	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Monodontidae	ANCESTRAL SPECIES	7	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000016769.k	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00890000139472.f.a	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Narwhal	MODERN SPECIES	298	ENSMMNG00015005161 #9	SLU7 (ENSMMNG00015005150) #10	FAM200C (ENSMMNG00015005143) #11	C1QTNF2 (ENSMMNG00015005134) #12	CCNJL (ENSMMNG00015005129) #13	FABP6 (ENSMMNG00015005121) #14	PWWP2A (ENSMMNG00015005111) #15	TTC1 (ENSMMNG00015005088) #16	ADRA1B (ENSMMNG00015005081) #17	ENSMMNG00015005070	IL12B (ENSMMNG00015005052) #18	UBLCP1 (ENSMMNG00015005043) #19	RNF145 (ENSMMNG00015005025) #20	EBF1 (ENSMMNG00015004987) #21	ENSMMNG00015004954	CLINT1 (ENSMMNG00015004936) #22	LSM11 (ENSMMNG00015004581) #23	THG1L (ENSMMNG00015004572) #24	SOX30 (ENSMMNG00015004559) #25	ADAM19 (ENSMMNG00015004529) #26	NIPAL4 (ENSMMNG00015004502) #27	FNDC9 (ENSMMNG00015004485) #28	CYFIP2 (ENSMMNG00015004412) #29	ITK (ENSMMNG00015004353) #30	GARIN3 (ENSMMNG00015004338) #31	MED7 (ENSMMNG00015004331) #32	HAVCR2 (ENSMMNG00015004322) #33	ENSMMNG00015004299	TIMD4 (ENSMMNG00015004278)	SGCD (ENSMMNG00015004248) #34	ENSMMNG00015004222
Beluga whale	MODERN SPECIES	34													ENSDLEG00000005947 #21	ENSDLEG00000005918 #21	ENSDLEG00000005905	CLINT1 (ENSDLEG00000005888) #22	LSM11 (ENSDLEG00000005881) #23	THG1L (ENSDLEG00000005861) #24	SOX30 (ENSDLEG00000005832) #25	ADAM19 (ENSDLEG00000005804) #26	FNDC9 (ENSDLEG00000005794) #28	NIPAL4 (ENSDLEG00000005749) #29	ITK (ENSDLEG00000005711) #30	GARIN3 (ENSDLEG00000005696) #31	MED7 (ENSDLEG00000005691) #32	HAVCR2 (ENSDLEG00000005675) #33	ENSDLEG00000005654	TIMD4 (ENSDLEG00000005638)	SGCD (ENSDLEG00000005608) #34	ENSDLEG00000005596	MRPL22 (ENSDLEG00000005582) #35
Vaquita	MODERN SPECIES	14	ENSPSNG00000013589 #9	SLU7 (ENSPSNG00000013646) #10	FAM200C (ENSPSNG00000013690) #11	C1QTNF2 (ENSPSNG00000013732) #12	CCNJL (ENSPSNG00000013861) #13	FABP6 (ENSPSNG00000013965) #14	PWWP2A (ENSPSNG00000014054) #15	TTC1 (ENSPSNG00000014163) #16	ADRA1B (ENSPSNG00000014285) #17	ENSPSNG00000014336	IL12B (ENSPSNG00000014420) #18	ENSPSNG00000014512 #19	RNF145 (ENSPSNG00000014588) #20	EBF1 (ENSPSNG00000014744) #21	ENSPSNG00000014992	CLINT1 (ENSPSNG00000009706) #22	LSM11 (ENSPSNG00000009807) #23	THG1L (ENSPSNG00000009859) #24	SOX30 (ENSPSNG00000009931) #25	ADAM19 (ENSPSNG00000010169) #26	NIPAL4 (ENSPSNG00000010278) #27	CYFIP2 (ENSPSNG00000010541) #29	FNDC9 (ENSPSNG00000010777) #28	ITK (ENSPSNG00000010805) #30	GARIN3 (ENSPSNG00000010987) #31	MED7 (ENSPSNG00000011034) #32	HAVCR2 (ENSPSNG00000011059) #33	ENSPSNG00000011086	TIMD4 (ENSPSNG00000011135)	SGCD (ENSPSNG00000011359) #34	ENSPSNG00000011398
Dolphin	MODERN SPECIES	5263																CLINT1 (ENSTTRG00000010444) #22
Sperm whale	MODERN SPECIES	19	PTTG1 (ENSPCTG00005003059) #9	SLU7 (ENSPCTG00005003036) #10	ZBED8 (ENSPCTG00005003023) #11	C1QTNF2 (ENSPCTG00005003007) #12	CCNJL (ENSPCTG00005002987) #13	FABP6 (ENSPCTG00005002976) #14	PWWP2A (ENSPCTG00005002957) #15	ENSPCTG00005002937	TTC1 (ENSPCTG00005002930) #16	ADRA1B (ENSPCTG00005002916) #17	ENSPCTG00005002907	IL12B (ENSPCTG00005002891) #18	UBLCP1 (ENSPCTG00005002871) #19	RNF145 (ENSPCTG00005002853) #20	EBF1 (ENSPCTG00005002705) #21	CLINT1 (ENSPCTG00005002580) #22	LSM11 (ENSPCTG00005002548) #23	THG1L (ENSPCTG00005002538) #24	SOX30 (ENSPCTG00005002511) #25	ADAM19 (ENSPCTG00005002484) #26	NIPAL4 (ENSPCTG00005002440) #27	FNDC9 (ENSPCTG00005002414) #28	CYFIP2 (ENSPCTG00005002337) #29	ITK (ENSPCTG00005002239) #30	FAM71B (ENSPCTG00005002221) #31	MED7 (ENSPCTG00005002212) #32	HAVCR2 (ENSPCTG00005002189) #33	ENSPCTG00005002169	TIMD4 (ENSPCTG00005002146)	SGCD (ENSPCTG00005002114) #34	ENSPCTG00005002098
Blue whale	MODERN SPECIES	14	ENSBMSG00010009631	TENM2 (ENSBMSG00010009463)	WWC1 (ENSBMSG00010009399)	RARS1 (ENSBMSG00010009380)	FBLL1 (ENSBMSG00010009376)	ENSBMSG00010009367	SLIT3 (ENSBMSG00010009303)	SPDL1 (ENSBMSG00010009288)	INSYN2B (ENSBMSG00010009282)	DOCK2 (ENSBMSG00010009215)	FOXI1 (ENSBMSG00010009190)	C5orf58 (ENSBMSG00010009183)	LCP2 (ENSBMSG00010009115)	ENSBMSG00010009094	EBF1 (ENSBMSG00010009081) #21	CLINT1 (ENSBMSG00010009050) #22	LSM11 (ENSBMSG00010009026) #23	THG1L (ENSBMSG00010009018) #24	SOX30 (ENSBMSG00010004167) #25	ADAM19 (ENSBMSG00010004153) #26	NIPAL4 (ENSBMSG00010004139) #27	FNDC9 (ENSBMSG00010004129) #28	CYFIP2 (ENSBMSG00010003470) #29	ITK (ENSBMSG00010003392) #30	MED7 (ENSBMSG00010003374) #32	HAVCR2 (ENSBMSG00010003356) #33	ENSBMSG00010003337	TIMD4 (ENSBMSG00010003320)	SGCD (ENSBMSG00010003298) #34	MRPL22 (ENSBMSG00010003280) #35	GEMIN5 (ENSBMSG00010003267) #36
Pecora	ANCESTRAL SPECIES		ENSGT00940000159531 #8	ENSGT00390000009693.c.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.d	ENSGT00940000159345.c.a	ENSGT00940000159345.c.b.a	ENSGT00940000161609
Yarkand deer	MODERN SPECIES	32	ENSCHYG00000018717 #9	ENSCHYG00000018499 #10	FAM200C (ENSCHYG00000018480) #11	C1QTNF2 (ENSCHYG00000018379) #12	CCNJL (ENSCHYG00000018329) #13	FABP6 (ENSCHYG00000018257) #14	PWWP2A (ENSCHYG00000018129) #15	TTC1 (ENSCHYG00000018034) #16	ADRA1B (ENSCHYG00000017986) #17	ENSCHYG00000017898	IL12B (ENSCHYG00000017821) #18	UBLCP1 (ENSCHYG00000017659) #19	RNF145 (ENSCHYG00000017338) #20	ENSCHYG00000017306	EBF1 (ENSCHYG00000016399) #21	CLINT1 (ENSCHYG00000016060) #22	LSM11 (ENSCHYG00000015958) #23	THG1L (ENSCHYG00000015881) #24	SOX30 (ENSCHYG00000015834) #25	ENSCHYG00000015753	ADAM19 (ENSCHYG00000015589) #26	NIPAL4 (ENSCHYG00000015526) #27	FNDC9 (ENSCHYG00000015510) #28	CYFIP2 (ENSCHYG00000014487) #29	ITK (ENSCHYG00000014169) #30	GARIN3 (ENSCHYG00000014111) #31	MED7 (ENSCHYG00000014070) #32	HAVCR2 (ENSCHYG00000013938) #33	ENSCHYG00000013888	ENSCHYG00000013740	ENSCHYG00000013715
Percora_a	ANCESTRAL SPECIES		ENSGT00390000009693.c.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155405.ib	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.d.b	ENSGT00940000159345.c.a	ENSGT00940000159345.c.b.a	ENSGT00940000161609
Bovidae	ANCESTRAL SPECIES		ENSGT00940000159531 #8	ENSGT00390000009693.c.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155405.ib	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850.j #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.d.b	ENSGT00940000159345.c.a	ENSGT00940000159345.c.b.a	ENSGT00940000161609
Bovinae	ANCESTRAL SPECIES	2	ENSGT00940000159531 #8	ENSGT00390000009693.c.a.a.b #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155405.ib	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850.j #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.d.a.b	ENSGT00940000159345.d.b	ENSGT00940000159345.c.a	ENSGT00940000159345.c.b.a
Bos	ANCESTRAL SPECIES	3	ENSGT00940000159531 #8	ENSGT00390000009693.c.a.a.b #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155405.ib	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850.j #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A.g.b #33	ENSGT00940000159345.d.a.b	ENSGT00940000159345.d.b	ENSGT00940000159345.c.a	ENSGT00940000159345.c.b.a
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000159531 #8	ENSGT00390000009693.c.a.a.b #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155405.ib	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850.j #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A.g.b #33	ENSGT00940000159345.d.a.b.a	ENSGT00940000159345.d.a.b.b	ENSGT00940000159345.d.b	ENSGT00940000159345.c.a
Cow	MODERN SPECIES	26	SLU7 (ENSBTAG00000008457) #10	FAM200C (ENSBTAG00000030282) #11	C1QTNF2 (ENSBTAG00000054287) #12	CCNJL (ENSBTAG00000046343) #13	FABP6 (ENSBTAG00000010632) #14	ENSBTAG00000053260	PWWP2A (ENSBTAG00000010341) #15	TTC1 (ENSBTAG00000010321) #16	ADRA1B (ENSBTAG00000040253) #17	ENSBTAG00000050222	IL12B (ENSBTAG00000004741) #18	UBLCP1 (ENSBTAG00000009103) #19	RNF145 (ENSBTAG00000025099) #20	EBF1 (ENSBTAG00000037508) #21	ENSBTAG00000050321	CLINT1 (ENSBTAG00000016199) #22	LSM11 (ENSBTAG00000010363) #23	THG1L (ENSBTAG00000010359) #24	SOX30 (ENSBTAG00000020491) #25	ADAM19 (ENSBTAG00000003836) #26	NIPAL4 (ENSBTAG00000020213) #27	CYFIP2 (ENSBTAG00000008916) #29	ITK (ENSBTAG00000000306) #30	GARIN3 (ENSBTAG00000013450) #31	MED7 (ENSBTAG00000050263) #32	HAVCR2 (ENSBTAG00000000495) #33	ENSBTAG00000036102	ENSBTAG00000052849 #33	TIMD4 (ENSBTAG00000013185)	ENSBTAG00000030297	ENSBTAG00000050594
Hybrid Bos Indicus	MODERN SPECIES	26	ATP10B (ENSBIXG00005025407) #8	ENSBIXG00005025242 #9	SLU7 (ENSBIXG00005025207) #10	FAM200C (ENSBIXG00005025174) #11	C1QTNF2 (ENSBIXG00005025150) #12	PWWP2A (ENSBIXG00005025120) #15	FABP6 (ENSBIXG00005025033) #14	ENSBIXG00005024988	TTC1 (ENSBIXG00005024975) #16	ADRA1B (ENSBIXG00005007707) #17	IL12B (ENSBIXG00005024914) #18	UBLCP1 (ENSBIXG00005024893) #19	RNF145 (ENSBIXG00005024872) #20	EBF1 (ENSBIXG00005024791) #21	ENSBIXG00005004219	CLINT1 (ENSBIXG00005024646) #22	LSM11 (ENSBIXG00005024573) #23	THG1L (ENSBIXG00005024532) #24	SOX30 (ENSBIXG00005024495) #25	ADAM19 (ENSBIXG00005004170) #26	NIPAL4 (ENSBIXG00005024348) #27	CYFIP2 (ENSBIXG00005024265) #29	FNDC9 (ENSBIXG00005024046) #28	ITK (ENSBIXG00005006285) #30	GARIN3 (ENSBIXG00005023992) #31	MED7 (ENSBIXG00005023975) #32	HAVCR2 (ENSBIXG00005005560) #33	ENSBIXG00005023705	ENSBIXG00005023584	ENSBIXG00005004035	ENSBIXG00005023558
Bos_a	ANCESTRAL SPECIES	2	ENSGT00940000159531 #8	ENSGT00390000009693.c.a.a.b #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155405.ib	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850.j #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000159345.c.a	ENSGT00940000159345.c.b.a	ENSGT00940000161609	ENSGT00940000159345.c.b.b	ENSGT00940000158509 #34
Domestic yak	MODERN SPECIES	27	ATP10B (ENSBGRG00000000552) #8	ENSBGRG00000000492 #9	SLU7 (ENSBGRG00000000435) #10	FAM200C (ENSBGRG00000017873) #11	C1QTNF2 (ENSBGRG00000017808) #12	FABP6 (ENSBGRG00000017725) #14	PWWP2A (ENSBGRG00000017485) #15	TTC1 (ENSBGRG00000017355) #16	ADRA1B (ENSBGRG00000017305) #17	ENSBGRG00000017048	IL12B (ENSBGRG00000016956) #18	UBLCP1 (ENSBGRG00000016766) #19	RNF145 (ENSBGRG00000016333) #20	EBF1 (ENSBGRG00000015942) #21	ENSBGRG00000015864	CLINT1 (ENSBGRG00000015659) #22	LSM11 (ENSBGRG00000015580) #23	THG1L (ENSBGRG00000015516) #24	SOX30 (ENSBGRG00000015400) #25	ADAM19 (ENSBGRG00000015117) #26	NIPAL4 (ENSBGRG00000015077) #27	FNDC9 (ENSBGRG00000015053) #28	CYFIP2 (ENSBGRG00000014210) #29	ITK (ENSBGRG00000013958) #30	GARIN3 (ENSBGRG00000013910) #31	MED7 (ENSBGRG00000013891) #32	ENSBGRG00000013868	ENSBGRG00000013840	ENSBGRG00000013748	ENSBGRG00000013704	TIMD4 (ENSBGRG00000013640)
Wild yak	MODERN SPECIES	2230																CLINT1 (ENSBMUG00000014946) #22	LSM11 (ENSBMUG00000014961) #23	THG1L (ENSBMUG00000014976) #24	SOX30 (ENSBMUG00000015018) #25	ADAM19 (ENSBMUG00000015040) #26	NIPAL4 (ENSBMUG00000015049) #27	CYFIP2 (ENSBMUG00000015224) #29	FNDC9 (ENSBMUG00000015431) #28	ENSBMUG00000015489 #30
American bison	MODERN SPECIES	3277	ATP10B (ENSBBBG00000022138) #8	ENSBBBG00000022168 #9	SLU7 (ENSBBBG00000022185) #10	FAM200C (ENSBBBG00000022197) #11	C1QTNF2 (ENSBBBG00000022210) #12	CCNJL (ENSBBBG00000022223) #13	FABP6 (ENSBBBG00000022234) #14	PWWP2A (ENSBBBG00000022277) #15	TTC1 (ENSBBBG00000008670) #16	ADRA1B (ENSBBBG00000005874) #17	ENSBBBG00000022359	IL12B (ENSBBBG00000022374) #18	UBLCP1 (ENSBBBG00000022388) #19	RNF145 (ENSBBBG00000022458) #20	EBF1 (ENSBBBG00000022600) #21	CLINT1 (ENSBBBG00000022678) #22	LSM11 (ENSBBBG00000022686) #23	THG1L (ENSBBBG00000022697) #24	SOX30 (ENSBBBG00000008131) #25	ADAM19 (ENSBBBG00000022757) #26	NIPAL4 (ENSBBBG00000022791) #27	FNDC9 (ENSBBBG00000005998) #28	CYFIP2 (ENSBBBG00000023290) #29	ITK (ENSBBBG00000023355) #30	GARIN3 (ENSBBBG00000023361) #31	MED7 (ENSBBBG00000023363) #32	ENSBBBG00000006109	ENSBBBG00000023368	ENSBBBG00000008685	TIMD4 (ENSBBBG00000023378)	ENSBBBG00000023383
Caprinae	ANCESTRAL SPECIES	3	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.c.a #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850.j #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.d.b	ENSGT00940000159345.c.a	ENSGT00940000161609	ENSGT00940000159345.c.b.b
Rambouillet Sheep	MODERN SPECIES	21	ENSOARG00020011112	ATP10B (ENSOARG00020010158) #8	ENSOARG00020010052 #9	SLU7 (ENSOARG00020009922) #10	FAM200C (ENSOARG00020009899) #11	C1QTNF2 (ENSOARG00020009842) #12	CCNJL (ENSOARG00020009830) #13	FABP6 (ENSOARG00020023698) #14	PWWP2A (ENSOARG00020023655) #15	TTC1 (ENSOARG00020023624) #16	ADRA1B (ENSOARG00020023614) #17	IL12B (ENSOARG00020023587) #18	UBLCP1 (ENSOARG00020023552) #19	RNF145 (ENSOARG00020023486) #20	EBF1 (ENSOARG00020023107) #21	CLINT1 (ENSOARG00020022979) #22	LSM11 (ENSOARG00020022936) #23	THG1L (ENSOARG00020022916) #24	SOX30 (ENSOARG00020022825) #25	ADAM19 (ENSOARG00020022502) #26	NIPAL4 (ENSOARG00020022329) #27	FNDC9 (ENSOARG00020022298) #28	CYFIP2 (ENSOARG00020021671) #29	ITK (ENSOARG00020021491) #30	GARIN3 (ENSOARG00020021452) #31	MED7 (ENSOARG00020021430) #32	ENSOARG00020021384	ENSOARG00020021239	HAVCR2 (ENSOARG00020021141) #33	ENSOARG00020021113	ENSOARG00020021010
Goat	MODERN SPECIES	26	GABRB2 (ENSCHIG00000024858) #7	ATP10B (ENSCHIG00000024331) #8	ENSCHIG00000027118 #9	SLU7 (ENSCHIG00000013793) #10	C1QTNF2 (ENSCHIG00000009887) #12	CCNJL (ENSCHIG00000019393) #13	FABP6 (ENSCHIG00000013198) #14	PWWP2A (ENSCHIG00000012956) #15	TTC1 (ENSCHIG00000012242) #16	ADRA1B (ENSCHIG00000018230) #17	IL12B (ENSCHIG00000016932) #18	UBLCP1 (ENSCHIG00000027116) #19	RNF145 (ENSCHIG00000020585) #20	ENSCHIG00000024488 #21	ENSCHIG00000023531 #21	CLINT1 (ENSCHIG00000022934) #22	LSM11 (ENSCHIG00000019251) #23	THG1L (ENSCHIG00000011287) #24	SOX30 (ENSCHIG00000008308) #25	ADAM19 (ENSCHIG00000005265) #26	NIPAL4 (ENSCHIG00000011672) #27	CYFIP2 (ENSCHIG00000007566) #29	FNDC9 (ENSCHIG00000027181) #28	ITK (ENSCHIG00000027054) #30	GARIN3 (ENSCHIG00000026639) #31	HAVCR2 (ENSCHIG00000017229) #33	ENSCHIG00000012551	ENSCHIG00000026349	ENSCHIG00000024814	TIMD4 (ENSCHIG00000021237)	ENSCHIG00000023594
Siberian musk deer	MODERN SPECIES	64	ENSMMSG00000005454	C1QTNF2 (ENSMMSG00000005413) #12	CCNJL (ENSMMSG00000005397) #13	FABP6 (ENSMMSG00000005362) #14	PWWP2A (ENSMMSG00000005304) #15	TTC1 (ENSMMSG00000005250) #16	ADRA1B (ENSMMSG00000005230) #17	ENSMMSG00000005198	ENSMMSG00000005162	IL12B (ENSMMSG00000005127) #18	UBLCP1 (ENSMMSG00000005080) #19	RNF145 (ENSMMSG00000004942) #20	ENSMMSG00000004886	EBF1 (ENSMMSG00000004757) #21	ENSMMSG00000004165	CLINT1 (ENSMMSG00000004140) #22	LSM11 (ENSMMSG00000004127) #23	THG1L (ENSMMSG00000004121) #24	SOX30 (ENSMMSG00000004081) #25	ADAM19 (ENSMMSG00000004015) #26	NIPAL4 (ENSMMSG00000003992) #27	FNDC9 (ENSMMSG00000003985) #28	CYFIP2 (ENSMMSG00000003916) #29	ITK (ENSMMSG00000003869) #30	GARIN3 (ENSMMSG00000003849) #31	MED7 (ENSMMSG00000003843) #32	HAVCR2 (ENSMMSG00000003829) #33	ENSMMSG00000003817	ENSMMSG00000003800	ENSMMSG00000003791	TIMD4 (ENSMMSG00000003764)
Camelidae	ANCESTRAL SPECIES	1			ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Alpaca	MODERN SPECIES	1919																CLINT1 (ENSVPAG00000007841) #22	LSM11 (ENSVPAG00000007840) #23	THG1L (ENSVPAG00000007839) #24	SOX30 (ENSVPAG00000007838) #25	ADAM19 (ENSVPAG00000007837) #26	ENSVPAG00000007836	CYFIP2 (ENSVPAG00000007834) #29	ITK (ENSVPAG00000007833) #30	ENSVPAG00000007832 #31	MED7 (ENSVPAG00000007831) #32	ENSVPAG00000007830	ENSVPAG00000007829	SGCD (ENSVPAG00000007828) #34
Arabian camel	MODERN SPECIES	22	MGAT1 (ENSCDRG00005009968)	ENSCDRG00005010049 #9	SLU7 (ENSCDRG00005010097) #10	FAM200C (ENSCDRG00005010177) #11	C1QTNF2 (ENSCDRG00005010201) #12	CCNJL (ENSCDRG00005010257) #13	FABP6 (ENSCDRG00005010314) #14	PWWP2A (ENSCDRG00005010394) #15	TTC1 (ENSCDRG00005010479) #16	ADRA1B (ENSCDRG00005010528) #17	IL12B (ENSCDRG00005010575) #18	UBLCP1 (ENSCDRG00005010616) #19	RNF145 (ENSCDRG00005000036) #20	ENSCDRG00005000046 #21	ENSCDRG00005000065 #21	CLINT1 (ENSCDRG00005000098) #22	LSM11 (ENSCDRG00005000153) #23	THG1L (ENSCDRG00005000166) #24	ENSCDRG00005000206 #25	ADAM19 (ENSCDRG00005000255) #26	CYFIP2 (ENSCDRG00005000418) #29	FNDC9 (ENSCDRG00005000691) #28	ITK (ENSCDRG00005000713) #30	ENSCDRG00005000731 #31	MED7 (ENSCDRG00005000741) #32	ENSCDRG00005000754 #33	ENSCDRG00005000763	ENSCDRG00005000772	TIMD4 (ENSCDRG00005000785)	SGCD (ENSCDRG00005000807) #34	ENSCDRG00005000835
Laurasiatheria_b	ANCESTRAL SPECIES	9	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.l #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Carnivora	ANCESTRAL SPECIES	8	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.l #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Caniformia	ANCESTRAL SPECIES	5	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.l #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Caniformia_b	ANCESTRAL SPECIES	4	ENSGT00910000147555	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.l #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Ursidae	ANCESTRAL SPECIES	24	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00950000186262	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.l #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
Ursus	ANCESTRAL SPECIES	10	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139.n #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00950000186262	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.l #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34
American black bear	MODERN SPECIES	1652																CLINT1 (ENSUAMG00000013359) #22	LSM11 (ENSUAMG00000013358) #23	THG1L (ENSUAMG00000013357) #24	SOX30 (ENSUAMG00000013351) #25	ADAM19 (ENSUAMG00000013348) #26	NIPAL4 (ENSUAMG00000013347) #27	ENSUAMG00000013346 #29
Polar bear	MODERN SPECIES	179	ENSUMAG00000024829 #9	SLU7 (ENSUMAG00000000110) #10	FAM200C (ENSUMAG00000000170) #11	C1QTNF2 (ENSUMAG00000000214) #12	CCNJL (ENSUMAG00000000308) #13	ENSUMAG00000000423 #14	ENSUMAG00000000451 #15	TTC1 (ENSUMAG00000000467) #16	ADRA1B (ENSUMAG00000000471) #17	ENSUMAG00000000518	IL12B (ENSUMAG00000000612) #18	UBLCP1 (ENSUMAG00000000619) #19	ENSUMAG00000000637 #20	ENSUMAG00000000646 #20	EBF1 (ENSUMAG00000000673) #21	CLINT1 (ENSUMAG00000000757) #22	THG1L (ENSUMAG00000000769) #24	ADAM19 (ENSUMAG00000000795) #26	NIPAL4 (ENSUMAG00000001130) #27	ENSUMAG00000001175 #29	FNDC9 (ENSUMAG00000002591) #28	ENSUMAG00000002604 #29	ITK (ENSUMAG00000002680) #30	GARIN3 (ENSUMAG00000002684) #31	MED7 (ENSUMAG00000002690) #32	HAVCR2 (ENSUMAG00000002692) #33	ENSUMAG00000002699	TIMD4 (ENSUMAG00000002705)	SGCD (ENSUMAG00000002712) #34	ENSUMAG00000002713	MRPL22 (ENSUMAG00000002718) #35
Giant Panda	MODERN SPECIES	13	ATP10B (ENSAMEG00000006672) #8	ENSAMEG00000006653 #9	SLU7 (ENSAMEG00000006613) #10	FAM200C (ENSAMEG00000029793) #11	C1QTNF2 (ENSAMEG00000006609) #12	CCNJL (ENSAMEG00000006599) #13	FABP6 (ENSAMEG00000006588) #14	PWWP2A (ENSAMEG00000006582) #15	TTC1 (ENSAMEG00000006568) #16	ADRA1B (ENSAMEG00000006563) #17	ENSAMEG00000030971	IL12B (ENSAMEG00000006528) #18	UBLCP1 (ENSAMEG00000006496) #19	RNF145 (ENSAMEG00000006459) #20	EBF1 (ENSAMEG00000006442) #21	CLINT1 (ENSAMEG00000006402) #22	LSM11 (ENSAMEG00000006379) #23	THG1L (ENSAMEG00000026033) #24	SOX30 (ENSAMEG00000006342) #25	ENSAMEG00000006282 #26	NIPAL4 (ENSAMEG00000030915) #27	ENSAMEG00000006085 #29	FNDC9 (ENSAMEG00000006265) #28	ITK (ENSAMEG00000005998) #30	GARIN3 (ENSAMEG00000005995) #31	MED7 (ENSAMEG00000027260) #32	HAVCR2 (ENSAMEG00000005987) #33	ENSAMEG00000005979	ENSAMEG00000005968	ENSAMEG00000024339	SGCD (ENSAMEG00000005961) #34
Mustelinae	ANCESTRAL SPECIES	13	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.h #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
American mink	MODERN SPECIES	19	GABRB2 (ENSNVIG00000005552) #7	ATP10B (ENSNVIG00000005440) #8	ENSNVIG00000005399 #9	SLU7 (ENSNVIG00000005356) #10	FAM200C (ENSNVIG00000005345) #11	C1QTNF2 (ENSNVIG00000005333) #12	CCNJL (ENSNVIG00000005319) #13	FABP6 (ENSNVIG00000005311) #14	PWWP2A (ENSNVIG00000005303) #15	TTC1 (ENSNVIG00000005267) #16	ADRA1B (ENSNVIG00000005259) #17	IL12B (ENSNVIG00000005238) #18	UBLCP1 (ENSNVIG00000005218) #19	RNF145 (ENSNVIG00000005160) #20	COE1 (ENSNVIG00000005007) #21	CLINT1 (ENSNVIG00000004898) #22	LSM11 (ENSNVIG00000004881) #23	THG1 (ENSNVIG00000004874) #24	SOX30 (ENSNVIG00000004842) #25	ADAM19 (ENSNVIG00000004808) #26	NIPAL4 (ENSNVIG00000004790) #27	FNDC9 (ENSNVIG00000004785) #28	CYFIP2 (ENSNVIG00000004210) #29	ITK (ENSNVIG00000004168) #30	GARIN3 (ENSNVIG00000004165) #31	MED7 (ENSNVIG00000004164) #32	HAVCR2 (ENSNVIG00000004137) #33	ENSNVIG00000004126	TIMD4 (ENSNVIG00000004115)	SGCD (ENSNVIG00000004051) #34	ENSNVIG00000004041
Ferret	MODERN SPECIES	162	FAM200C (ENSMPUG00000019315) #11	ENSMPUG00000013274	C1QTNF2 (ENSMPUG00000013282) #12	CCNJL (ENSMPUG00000013291) #13	FABP6 (ENSMPUG00000013299) #14	PWWP2A (ENSMPUG00000013319) #15	TTC1 (ENSMPUG00000013323) #16	ADRA1B (ENSMPUG00000013327) #17	ENSMPUG00000013331	IL12B (ENSMPUG00000013333) #18	UBLCP1 (ENSMPUG00000013396) #19	RNF145 (ENSMPUG00000013403) #20	ENSMPUG00000013409 #21	ENSMPUG00000013414 #21	ENSMPUG00000013444	CLINT1 (ENSMPUG00000013448) #22	ENSMPUG00000013460 #23	THG1L (ENSMPUG00000013462) #24	SOX30 (ENSMPUG00000013465) #25	ADAM19 (ENSMPUG00000013467) #26	NIPAL4 (ENSMPUG00000013472) #27	CYFIP2 (ENSMPUG00000013478) #29	ENSMPUG00000019316	ITK (ENSMPUG00000013488) #30	GARIN3 (ENSMPUG00000013494) #31	HAVCR2 (ENSMPUG00000013496) #33	ENSMPUG00000013499	ENSMPUG00000013513	ENSMPUG00000013518	SGCD (ENSMPUG00000013520) #34	ENSMPUG00000019317
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT01090000260046.e.a.a.a	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110.m #35
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00940000176159
Dog	MODERN SPECIES	32	GABRB2 (ENSCAFG00845000854) #7	ATP10B (ENSCAFG00845000916) #8	PTTG1 (ENSCAFG00845001057) #9	SLU7 (ENSCAFG00845001078) #10	ZBED8 (ENSCAFG00845001117) #11	C1QTNF2 (ENSCAFG00845001139) #12	ENSCAFG00845001155 #13	FABP6 (ENSCAFG00845001171) #14	PWWP2A (ENSCAFG00845001220) #15	TTC1 (ENSCAFG00845001251) #16	ADRA1B (ENSCAFG00845001264) #17	IL12B (ENSCAFG00845001277) #18	UBLCP1 (ENSCAFG00845001304) #19	RNF145 (ENSCAFG00845001329) #20	EBF1 (ENSCAFG00845001379) #21	CLINT1 (ENSCAFG00845001528) #22	LSM11 (ENSCAFG00845001569) #23	THG1L (ENSCAFG00845001599) #24	SOX30 (ENSCAFG00845001631) #25	ENSCAFG00845001798 #26	NIPAL4 (ENSCAFG00845002106) #27	ENSCAFG00845002164 #29	FNDC9 (ENSCAFG00845002274) #28	ITK (ENSCAFG00845002293) #30	GARIN3 (ENSCAFG00845002317) #31	MED7 (ENSCAFG00845002415) #32	HAVCR2 (ENSCAFG00845002443) #33	HAVCR1 (ENSCAFG00845002501)	SGCD (ENSCAFG00845002587) #34	ENSCAFG00845002653	ENSCAFG00845002676
Dingo	MODERN SPECIES	324	ATP10B (ENSCAFG00020001491) #8	ENSCAFG00020001472 #9	SLU7 (ENSCAFG00020001456) #10	FAM200C (ENSCAFG00020001453) #11	C1QTNF2 (ENSCAFG00020001444) #12	CCNJL (ENSCAFG00020001434) #13	FABP6 (ENSCAFG00020001419) #14	ENSCAFG00020025615 #15	TTC1 (ENSCAFG00020025613) #16	ADRA1B (ENSCAFG00020025610) #17	IL12B (ENSCAFG00020025606) #18	UBLCP1 (ENSCAFG00020025603) #19	RNF145 (ENSCAFG00020025600) #20	ENSCAFG00020025597 #21	ENSCAFG00020025593 #21	CLINT1 (ENSCAFG00020025584) #22	LSM11 (ENSCAFG00020025581) #23	THG1L (ENSCAFG00020025580) #24	SOX30 (ENSCAFG00020025579) #25	ADAM19 (ENSCAFG00020025536) #26	NIPAL4 (ENSCAFG00020025519) #27	FNDC9 (ENSCAFG00020025517) #28	ENSCAFG00020024168 #29	ITK (ENSCAFG00020023983) #30	GARIN3 (ENSCAFG00020023977) #31	MED7 (ENSCAFG00020023973) #32	HAVCR2 (ENSCAFG00020023969) #33	ENSCAFG00020023950	ENSCAFG00020023947	SGCD (ENSCAFG00020023945) #34	ENSCAFG00020023941
Red fox	MODERN SPECIES	2	ATP10B (ENSVVUG00000003923) #8	ENSVVUG00000003974 #9	SLU7 (ENSVVUG00000003989) #10	C1QTNF2 (ENSVVUG00000004013) #12	CCNJL (ENSVVUG00000004019) #13	FABP6 (ENSVVUG00000004029) #14	ENSVVUG00000004072 #15	TTC1 (ENSVVUG00000004077) #16	ADRA1B (ENSVVUG00000004081) #17	ENSVVUG00000004097	IL12B (ENSVVUG00000004129) #18	UBLCP1 (ENSVVUG00000004137) #19	RNF145 (ENSVVUG00000004153) #20	ENSVVUG00000004159 #21	ENSVVUG00000004170 #21	CLINT1 (ENSVVUG00000004216) #22	THG1L (ENSVVUG00000004234) #24	ADAM19 (ENSVVUG00000004275) #26	NIPAL4 (ENSVVUG00000004308) #27	CYFIP2 (ENSVVUG00000004333) #29	FNDC9 (ENSVVUG00000004396) #28	ITK (ENSVVUG00000004409) #30	GARIN3 (ENSVVUG00000004485) #31	MED7 (ENSVVUG00000004493) #32	HAVCR2 (ENSVVUG00000004500) #33	HAVCR1 (ENSVVUG00000004509)	TIMD4 (ENSVVUG00000004520)	SGCD (ENSVVUG00000004564) #34	ENSVVUG00000004602	ENSVVUG00000004608	MRPL22 (ENSVVUG00000004611) #35
Felidae	ANCESTRAL SPECIES	6	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.i #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Cat	MODERN SPECIES		ENSFCAG00000024074 #9	SLU7 (ENSFCAG00000011152) #10	FAM200C (ENSFCAG00000037292) #11	C1QTNF2 (ENSFCAG00000039423) #12	ENSFCAG00000053200	CCNJL (ENSFCAG00000029610) #13	FABP6 (ENSFCAG00000036330) #14	PWWP2A (ENSFCAG00000041159) #15	TTC1 (ENSFCAG00000029425) #16	ADRA1B (ENSFCAG00000011146) #17	ENSFCAG00000052138	IL12B (ENSFCAG00000015571) #18	UBLCP1 (ENSFCAG00000026371) #19	RNF145 (ENSFCAG00000012160) #20	EBF1 (ENSFCAG00000008547) #21	CLINT1 (ENSFCAG00000001267) #22	LSM11 (ENSFCAG00000001266) #23	THG1L (ENSFCAG00000022752) #24	SOX30 (ENSFCAG00000003853) #25	ADAM19 (ENSFCAG00000009956) #26	NIPAL4 (ENSFCAG00000041380) #27	CYFIP2 (ENSFCAG00000009953) #29	ITK (ENSFCAG00000009952) #30	GARIN3 (ENSFCAG00000041496) #31	MED7 (ENSFCAG00000015029) #32	HAVCR2 (ENSFCAG00000035171) #33	HAVCR1 (ENSFCAG00000043459)	TIMD4 (ENSFCAG00000033198)	SGCD (ENSFCAG00000023950) #34	ENSFCAG00000053803	MRPL22 (ENSFCAG00000036527) #35
Panthera	ANCESTRAL SPECIES	6	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693.i #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Tiger	MODERN SPECIES	103	SLU7 (ENSPTIG00000005434) #10	FAM200C (ENSPTIG00000000872) #11	C1QTNF2 (ENSPTIG00000021838) #12	CCNJL (ENSPTIG00000021421) #13	FABP6 (ENSPTIG00000019586) #14	ENSPTIG00000018722 #15	TTC1 (ENSPTIG00000017706) #16	ADRA1B (ENSPTIG00000017492) #17	ENSPTIG00000000721	IL12B (ENSPTIG00000016911) #18	UBLCP1 (ENSPTIG00000016150) #19	RNF145 (ENSPTIG00000005419) #20	ENSPTIG00000000083 #21	ENSPTIG00000019712 #21	ENSPTIG00000019293	CLINT1 (ENSPTIG00000015240) #22	LSM11 (ENSPTIG00000014465) #23	THG1L (ENSPTIG00000013921) #24	SOX30 (ENSPTIG00000013560) #25	ADAM19 (ENSPTIG00000006421) #26	NIPAL4 (ENSPTIG00000000723) #27	CYFIP2 (ENSPTIG00000011198) #29	ITK (ENSPTIG00000009243) #30	GARIN3 (ENSPTIG00000008875) #31	MED7 (ENSPTIG00000007305) #32	HAVCR2 (ENSPTIG00000002332) #33	ENSPTIG00000019717	TIMD4 (ENSPTIG00000018290)	SGCD (ENSPTIG00000017200) #34	MRPL22 (ENSPTIG00000014937) #35	GEMIN5 (ENSPTIG00000013421) #36
Panthera_a	ANCESTRAL SPECIES	3	ENSGT00940000159531 #8	ENSGT00390000009693.i #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00950000182891.a.a.b.a.a.a.a	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
lion	MODERN SPECIES		SLU7 (ENSPLOG00000002543) #10	FAM200C (ENSPLOG00000002529) #11	ENSPLOG00000002514	C1QTNF2 (ENSPLOG00000002500) #12	CCNJL (ENSPLOG00000002482) #13	FABP6 (ENSPLOG00000002470) #14	PWWP2A (ENSPLOG00000002448) #15	TTC1 (ENSPLOG00000002425) #16	ADRA1B (ENSPLOG00000002412) #17	ENSPLOG00000002403	IL12B (ENSPLOG00000002378) #18	UBLCP1 (ENSPLOG00000002343) #19	RNF145 (ENSPLOG00000002290) #20	EBF1 (ENSPLOG00000002168) #21	ENSPLOG00000002104	CLINT1 (ENSPLOG00000002054) #22	LSM11 (ENSPLOG00000002031) #23	THG1L (ENSPLOG00000002004) #24	SOX30 (ENSPLOG00000001959) #25	ADAM19 (ENSPLOG00000001872) #26	NIPAL4 (ENSPLOG00000001845) #27	FNDC9 (ENSPLOG00000001835) #28	CYFIP2 (ENSPLOG00000001761) #29	ITK (ENSPLOG00000001668) #30	GARIN3 (ENSPLOG00000001649) #31	MED7 (ENSPLOG00000001630) #32	ENSPLOG00000001453	SGCD (ENSPLOG00000001358) #34	ENSPLOG00000001338	MRPL22 (ENSPLOG00000001317) #35	ENSPLOG00000001309
leopard	DUPLICATION
leopard	MODERN SPECIES	157	ENSPPRG00000013682 #9	SLU7 (ENSPPRG00000013856) #10	FAM200C (ENSPPRG00000018806) #11	C1QTNF2 (ENSPPRG00000014166) #12	CCNJL (ENSPPRG00000014415) #13	FABP6 (ENSPPRG00000014547) #14	PWWP2A (ENSPPRG00000014739) #15	TTC1 (ENSPPRG00000014921) #16	ADRA1B (ENSPPRG00000014950) #17	ENSPPRG00000018892	IL12B (ENSPPRG00000015059) #18	UBLCP1 (ENSPPRG00000015145) #19	RNF145 (ENSPPRG00000015439) #20	EBF1 (ENSPPRG00000016201) #21	ENSPPRG00000016274	ENSPPRG00000016332 #22
leopard	MODERN SPECIES	44																ENSPPRG00000007179 #22	LSM11 (ENSPPRG00000007395) #23	THG1L (ENSPPRG00000007563) #24	SOX30 (ENSPPRG00000008501) #25	ADAM19 (ENSPPRG00000010823) #26	NIPAL4 (ENSPPRG00000012413) #27	ENSPPRG00000023958 #29	ITK (ENSPPRG00000023522) #30	GARIN3 (ENSPPRG00000023014) #31	MED7 (ENSPPRG00000020406) #32	HAVCR2 (ENSPPRG00000000289) #33	ENSPPRG00000001383	TIMD4 (ENSPPRG00000002189)	SGCD (ENSPPRG00000003201) #34	MRPL22 (ENSPPRG00000004926) #35	ENSPPRG00000005081
Laurasiatheria_c	ANCESTRAL SPECIES	7	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Equus	ANCESTRAL SPECIES	6	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00390000017762	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b.k #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000010391.z.a
Donkey	MODERN SPECIES	29	ATP10B (ENSEASG00005000597) #8	ENSEASG00005000612 #9	SLU7 (ENSEASG00005000613) #10	FAM200C (ENSEASG00005000619) #11	C1QTNF2 (ENSEASG00005000623) #12	CCNJL (ENSEASG00005000630) #13	ENSEASG00005000639 #14	ENSEASG00005034384 #15	TTC1 (ENSEASG00005000653) #16	ADRA1B (ENSEASG00005000662) #17	IL12B (ENSEASG00005000682) #18	UBLCP1 (ENSEASG00005000694) #19	RNF145 (ENSEASG00005000697) #20	EBF1 (ENSEASG00005000716) #21	ENSEASG00005000709	CLINT1 (ENSEASG00005000743) #22	LSM11 (ENSEASG00005000751) #23	THG1L (ENSEASG00005000757) #24	SOX30 (ENSEASG00005000761) #25	ENSEASG00005000769 #26	NIPAL4 (ENSEASG00005024733) #27	ENSEASG00005000782 #29	FNDC9 (ENSEASG00005031824) #28	ITK (ENSEASG00005000833) #30	GARIN3 (ENSEASG00005000928) #31	MED7 (ENSEASG00005000944) #32	HAVCR2 (ENSEASG00005000959) #33	ENSEASG00005034411	TIMD4 (ENSEASG00005000989)	SGCD (ENSEASG00005000999) #34	ENSEASG00005001006
Horse	MODERN SPECIES	5	ENSECAG00000009520 #9	SLU7 (ENSECAG00000013696) #10	FAM200C (ENSECAG00000004167) #11	CCNJL (ENSECAG00000021303) #13	PWWP2A (ENSECAG00000058444) #15	TTC1 (ENSECAG00000006769) #16	ENSECAG00000031871	ADRA1B (ENSECAG00000011653) #17	ENSECAG00000057534	ENSECAG00000036026	IL12B (ENSECAG00000012803) #18	UBLCP1 (ENSECAG00000019228) #19	RNF145 (ENSECAG00000024020) #20	EBF1 (ENSECAG00000007964) #21	ENSECAG00000036063	CLINT1 (ENSECAG00000009181) #22	LSM11 (ENSECAG00000039005) #23	SOX30 (ENSECAG00000016620) #25	ADAM19 (ENSECAG00000017922) #26	NIPAL4 (ENSECAG00000000574) #27	CYFIP2 (ENSECAG00000011994) #29	FNDC9 (ENSECAG00000011980) #28	ITK (ENSECAG00000009530) #30	GARIN3 (ENSECAG00000014747) #31	MED7 (ENSECAG00000004270) #32	HAVCR2 (ENSECAG00000015318) #33	ENSECAG00000016251	SGCD (ENSECAG00000016277) #34	ENSECAG00000052847	ENSECAG00000044149	MRPL22 (ENSECAG00000018172) #35
Chiroptera	ANCESTRAL SPECIES	1	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Microchiroptera	ANCESTRAL SPECIES	3	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000163112 #11	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01030000240140	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.k #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Greater horseshoe bat	MODERN SPECIES	16	SLU7 (ENSRFEG00010018823) #10	FAM200C (ENSRFEG00010018805) #11	C1QTNF2 (ENSRFEG00010018713) #12	CCNJL (ENSRFEG00010018682) #13	FABP6 (ENSRFEG00010018657) #14	PWWP2A (ENSRFEG00010018597) #15	TTC1 (ENSRFEG00010018551) #16	ADRA1B (ENSRFEG00010018512) #17	ENSRFEG00010018474	IL12B (ENSRFEG00010018416) #18	UBLCP1 (ENSRFEG00010018381) #19	ENSRFEG00010018346	RNF145 (ENSRFEG00010018289) #20	ENSRFEG00010018210	EBF1 (ENSRFEG00010018103) #21	CLINT1 (ENSRFEG00010018014) #22	LSM11 (ENSRFEG00010017961) #23	THG1L (ENSRFEG00010017934) #24	SOX30 (ENSRFEG00010017758) #25	ADAM19 (ENSRFEG00010017696) #26	NIPAL4 (ENSRFEG00010017454) #27	FNDC9 (ENSRFEG00010017433) #28	CYFIP2 (ENSRFEG00010017183) #29	ITK (ENSRFEG00010017117) #30	GARIN3 (ENSRFEG00010017035) #31	MED7 (ENSRFEG00010017016) #32	HAVCR2 (ENSRFEG00010016910) #33	ENSRFEG00010016830	ENSRFEG00010016791	TIMD4 (ENSRFEG00010016766)	SGCD (ENSRFEG00010016625) #34
Microbat	MODERN SPECIES	993	ENSMLUG00000002317 #9	SLU7 (ENSMLUG00000003091) #10	FAM200C (ENSMLUG00000003086) #11	C1QTNF2 (ENSMLUG00000003082) #12	CCNJL (ENSMLUG00000003076) #13	FABP6 (ENSMLUG00000003069) #14	PWWP2A (ENSMLUG00000003065) #15	TTC1 (ENSMLUG00000003057) #16	ADRA1B (ENSMLUG00000010123) #17	ENSMLUG00000029937	IL12B (ENSMLUG00000006352) #18	UBLCP1 (ENSMLUG00000006359) #19	RNF145 (ENSMLUG00000004383) #20	ENSMLUG00000025817 #21	ENSMLUG00000004376 #21	CLINT1 (ENSMLUG00000015942) #22	LSM11 (ENSMLUG00000015930) #23	THG1L (ENSMLUG00000015926) #24	SOX30 (ENSMLUG00000015904) #25	ADAM19 (ENSMLUG00000015885) #26	NIPAL4 (ENSMLUG00000015875) #27	ENSMLUG00000015832 #29	FNDC9 (ENSMLUG00000015859) #28	ITK (ENSMLUG00000015811) #30	GARIN3 (ENSMLUG00000015805) #31	ENSMLUG00000013259 #32	ENSMLUG00000024956	ENSMLUG00000025738	ENSMLUG00000026567	ENSMLUG00000007378	ENSMLUG00000005736
Megabat	MODERN SPECIES	4085																CLINT1 (ENSPVAG00000006281) #22	LSM11 (ENSPVAG00000006280) #23	THG1L (ENSPVAG00000006279) #24
Atlantogenata	ANCESTRAL SPECIES		ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063 #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Xenarthra	ANCESTRAL SPECIES																	ENSGT00940000155650 #22
Armadillo	MODERN SPECIES	4646											IGFBP7 (ENSDNOG00000030830)	POLR2B (ENSDNOG00000007705)	NOA1 (ENSDNOG00000031811)	REST (ENSDNOG00000049113)	ENSDNOG00000040748	ENSDNOG00000047355 #22
Afrotheria	ANCESTRAL SPECIES	7	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213.b #16	ENSGT00940000157213.a #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063.c #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.q.b	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Afrotheria_a	ANCESTRAL SPECIES	7	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213.b #16	ENSGT00940000157213.a #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000162063.c #31	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000159345.q.b	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35
Elephant	MODERN SPECIES	2	GABRB2 (ENSLAFG00000018272) #7	ATP10B (ENSLAFG00000010994) #8	ENSLAFG00000011135 #9	SLU7 (ENSLAFG00000003725) #10	C1QTNF2 (ENSLAFG00000002281) #12	CCNJL (ENSLAFG00000020892) #13	FABP6 (ENSLAFG00000025554) #14	PWWP2A (ENSLAFG00000016182) #15	ENSLAFG00000028861 #16	ENSLAFG00000016176 #16	ADRA1B (ENSLAFG00000016171) #17	IL12B (ENSLAFG00000015755) #18	UBLCP1 (ENSLAFG00000011908) #19	RNF145 (ENSLAFG00000018609) #20	EBF1 (ENSLAFG00000017522) #21	CLINT1 (ENSLAFG00000004930) #22	LSM11 (ENSLAFG00000004928) #23	THG1L (ENSLAFG00000004926) #24	SOX30 (ENSLAFG00000004922) #25	ENSLAFG00000028268 #26	NIPAL4 (ENSLAFG00000023012) #27	FNDC9 (ENSLAFG00000002846) #28	CYFIP2 (ENSLAFG00000002840) #29	ITK (ENSLAFG00000003582) #30	ENSLAFG00000014173 #31	MED7 (ENSLAFG00000029023) #32	HAVCR2 (ENSLAFG00000016886) #33	ENSLAFG00000028629	ENSLAFG00000028843	ENSLAFG00000028205	SGCD (ENSLAFG00000015083) #34
Hyrax	MODERN SPECIES	10868																CLINT1 (ENSPCAG00000006839) #22
Tenrec	MODERN SPECIES	1484																CLINT1 (ENSETEG00000007213) #22
Marsupialia	ANCESTRAL SPECIES	9	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Marsupialia_b	ANCESTRAL SPECIES	5	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Diprotodontia	ANCESTRAL SPECIES	6	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Diprotodontia_a	ANCESTRAL SPECIES	7	ENSGT00940000156722	ENSGT00940000154245.A #7	ENSGT00940000159531 #8	ENSGT00390000009693 #9	ENSGT00390000002292.b #10	ENSGT00940000159591 #12	ENSGT00940000159349 #13	ENSGT00940000157139 #14	ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000154444.A #33	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Common wonbat	MODERN SPECIES	1087	GABRB2 (ENSVURG00010003864) #7	ATP10B (ENSVURG00010003941) #8	ENSVURG00010004009 #9	SLU7 (ENSVURG00010004014) #10	C1QTNF2 (ENSVURG00010004032) #12	CCNJL (ENSVURG00010004040) #13	FABP6 (ENSVURG00010004096) #14	PWWP2A (ENSVURG00010004109) #15	TTC1 (ENSVURG00010004135) #16	ADRA1B (ENSVURG00010004186) #17	IL12B (ENSVURG00010004208) #18	UBLCP1 (ENSVURG00010004222) #19	RNF145 (ENSVURG00010004262) #20	EBF1 (ENSVURG00010004341) #21	ENSVURG00010004541	CLINT1 (ENSVURG00010004606) #22	ENSVURG00010004622	LSM11 (ENSVURG00010004625) #23	THG1L (ENSVURG00010004636) #24	ENSVURG00010004652 #25	ADAM19 (ENSVURG00010004686) #26	NIPAL4 (ENSVURG00010004707) #27	CYFIP2 (ENSVURG00010004746) #29	FNDC9 (ENSVURG00010004778) #28	ITK (ENSVURG00010004784) #30	MED7 (ENSVURG00010004800) #32	ENSVURG00010004805 #33	SGCD (ENSVURG00010004872) #34	MRPL22 (ENSVURG00010004914) #35	GEMIN5 (ENSVURG00010004936) #36	ENSVURG00010004975 #37
koala	MODERN SPECIES	44	GABRB2 (ENSPCIG00000012027) #7	ATP10B (ENSPCIG00000018103) #8	ENSPCIG00000018106 #9	ENSPCIG00000018111 #10	C1QTNF2 (ENSPCIG00000018218) #12	CCNJL (ENSPCIG00000018219) #13	FABP6 (ENSPCIG00000018220) #14	PWWP2A (ENSPCIG00000018222) #15	TTC1 (ENSPCIG00000018224) #16	ADRA1B (ENSPCIG00000025630) #17	IL12B (ENSPCIG00000013888) #18	UBLCP1 (ENSPCIG00000013892) #19	RNF145 (ENSPCIG00000013902) #20	EBF1 (ENSPCIG00000013916) #21	ENSPCIG00000009163	CLINT1 (ENSPCIG00000018474) #22	LSM11 (ENSPCIG00000018473) #23	THG1L (ENSPCIG00000018471) #24	SOX30 (ENSPCIG00000018469) #25
Wallaby	MODERN SPECIES	2213																ENSMEUG00000009710 #22
Tasmanian devil	MODERN SPECIES	1	GABRB2 (ENSSHAG00000003958) #7	ATP10B (ENSSHAG00000011397) #8	ENSSHAG00000023953	ENSSHAG00000022623 #9	SLU7 (ENSSHAG00000009841) #10	C1QTNF2 (ENSSHAG00000031569) #12	CCNJL (ENSSHAG00000009091) #13	FABP6 (ENSSHAG00000008218) #14	PWWP2A (ENSSHAG00000007717) #15	TTC1 (ENSSHAG00000002270) #16	ADRA1B (ENSSHAG00000006676) #17	IL12B (ENSSHAG00000018821) #18	UBLCP1 (ENSSHAG00000018812) #19	RNF145 (ENSSHAG00000018754) #20	EBF1 (ENSSHAG00000024375) #21	CLINT1 (ENSSHAG00000017023) #22	LSM11 (ENSSHAG00000016958) #23	THG1L (ENSSHAG00000016908) #24	SOX30 (ENSSHAG00000016758) #25	ADAM19 (ENSSHAG00000016446) #26	NIPAL4 (ENSSHAG00000031689) #27	FNDC9 (ENSSHAG00000022510) #28	CYFIP2 (ENSSHAG00000016029) #29	ITK (ENSSHAG00000015627) #30	MED7 (ENSSHAG00000026026) #32	ENSSHAG00000022854 #33	ENSSHAG00000031037	ENSSHAG00000014830	SGCD (ENSSHAG00000012936) #34	ENSSHAG00000029557	ENSSHAG00000026969
Opossum	MODERN SPECIES		GABRB2 (ENSMODG00000007860) #7	ATP10B (ENSMODG00000007907) #8	ENSMODG00000007930 #9	ENSMODG00000048898	SLU7 (ENSMODG00000007968) #10	C1QTNF2 (ENSMODG00000007978) #12	FABP6 (ENSMODG00000008000) #14	PWWP2A (ENSMODG00000008004) #15	TTC1 (ENSMODG00000008015) #16	ADRA1B (ENSMODG00000008023) #17	IL12B (ENSMODG00000008039) #18	UBLCP1 (ENSMODG00000008063) #19	RNF145 (ENSMODG00000008093) #20	EBF1 (ENSMODG00000008198) #21	ENSMODG00000008219	CLINT1 (ENSMODG00000008305) #22	LSM11 (ENSMODG00000008314) #23	THG1L (ENSMODG00000008328) #24	SOX30 (ENSMODG00000008341) #25	ENSMODG00000044152	ADAM19 (ENSMODG00000008386) #26	NIPAL4 (ENSMODG00000008399) #27	ENSMODG00000008409	FNDC9 (ENSMODG00000023717) #28	CYFIP2 (ENSMODG00000008425) #29	ITK (ENSMODG00000008495) #30	MED7 (ENSMODG00000008431) #32	ENSMODG00000027773 #33	ENSMODG00000042386	ENSMODG00000008537	SGCD (ENSMODG00000008547) #34
Platypus	MODERN SPECIES	84	GABRA1 (ENSOANG00000040890)	GABRA6 (ENSOANG00000003609)	GABRB2 (ENSOANG00000003608) #7	ATP10B (ENSOANG00000003611) #8	ENSOANG00000008417 #9	SLU7 (ENSOANG00000012329) #10	C1QTNF2 (ENSOANG00000012330) #12	CCNJL (ENSOANG00000047350) #13	PWWP2A (ENSOANG00000043388) #15	TTC1 (ENSOANG00000012333) #16	ADRA1B (ENSOANG00000012334) #17	IL12B (ENSOANG00000012335) #18	UBLCP1 (ENSOANG00000012336) #19	RNF145 (ENSOANG00000012337) #20	EBF1 (ENSOANG00000012338) #21	CLINT1 (ENSOANG00000005072) #22	LSM11 (ENSOANG00000005073) #23	THG1L (ENSOANG00000005074) #24	SOX30 (ENSOANG00000048847) #25	ADAM19 (ENSOANG00000005077) #26	CYFIP2 (ENSOANG00000005078) #29	FNDC9 (ENSOANG00000038112) #28	ITK (ENSOANG00000005082) #30	MED7 (ENSOANG00000005192) #32	ENSOANG00000021408 #33	ENSOANG00000005086 #33	ENSOANG00000005088	SGCD (ENSOANG00000005090) #34	ENSOANG00000005091 #35	GEMIN5 (ENSOANG00000005092) #36	CNOT8 (ENSOANG00000005094) #37
Sauria	ANCESTRAL SPECIES	17	ENSGT00940000157197	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT01090000260260	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000161609	ENSGT00940000159345	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Lepidosauria	ANCESTRAL SPECIES	15	ENSGT00940000157197	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT01090000260260.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
tuatara	DUPLICATION
tuatara	MODERN SPECIES	880	NOP16 (ENSSPUG00000006508)	ARL10 (ENSSPUG00000006518)	ENSSPUG00000006523	KIAA1191 (ENSSPUG00000006555)	SIMC1 (ENSSPUG00000006580)	THOC3 (ENSSPUG00000006652)	ENSSPUG00000006665	ENSSPUG00000006684	ENSSPUG00000006693	ENSSPUG00000006699	ENSSPUG00000006714	ENSSPUG00000006722	UBLCP1 (ENSSPUG00000006734) #19	RNF145 (ENSSPUG00000006754) #20	EBF1 (ENSSPUG00000006804) #21	ENSSPUG00000006951 #22	LSM11 (ENSSPUG00000007030) #23	THG1L (ENSSPUG00000007060) #24	SOX30 (ENSSPUG00000007072) #25	ADAM19 (ENSSPUG00000007079) #26	NIPAL4 (ENSSPUG00000007102) #27	CYFIP2 (ENSSPUG00000007142) #29	FNDC9 (ENSSPUG00000007390) #28	ITK (ENSSPUG00000007395) #30	ENSSPUG00000007417
tuatara	MODERN SPECIES	316																ENSSPUG00000002019 #22	ENSSPUG00000002097	ENSSPUG00000002107	ENSSPUG00000002115	NRG3 (ENSSPUG00000002126)
Episquamata	ANCESTRAL SPECIES	4	ENSGT00940000157197	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT01090000260260.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C
Laterata	ANCESTRAL SPECIES	1	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT01020000230731.A.b	ENSGT01020000230731.B	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C
Common wall lizard	MODERN SPECIES	10	ENSPMRG00000007824	ENSPMRG00000007820	ENSPMRG00000007815	ENSPMRG00000007811	ENSPMRG00000007804	ENSPMRG00000007803	ENSPMRG00000007800	ENSPMRG00000007796	ENSPMRG00000007793	UBLCP1 (ENSPMRG00000007786) #19	RNF145 (ENSPMRG00000007773) #20	ENSPMRG00000007766 #21	EBF1 (ENSPMRG00000007754) ##21	ENSPMRG00000007750	ENSPMRG00000007745	CLINT1 (ENSPMRG00000007738) #22	LSM11 (ENSPMRG00000007729) #23	THG1L (ENSPMRG00000007708) #24	SOX30 (ENSPMRG00000007702) #25	ADAM19 (ENSPMRG00000007693) #26	NIPAL4 (ENSPMRG00000007688) #27	ENSPMRG00000007684 #27	CYFIP2 (ENSPMRG00000007665) #29	ITK (ENSPMRG00000007649) #30	MED7 (ENSPMRG00000007642) #32	ENSPMRG00000007641	ENSPMRG00000007636	ENSPMRG00000007631 #34	ENSPMRG00000007624 #34	MRPL22 (ENSPMRG00000007619) #35	GEMIN5 (ENSPMRG00000007609) #36
Argentine black and white tegu	MODERN SPECIES	97			ENSSMRG00000017642	ENSSMRG00000017643	ENSSMRG00000017644	ENSSMRG00000017650	ENSSMRG00000017651	ENSSMRG00000017654	ENSSMRG00000017655	ENSSMRG00000017656	ENSSMRG00000017657	UBLCP1 (ENSSMRG00000017658) #19	RNF145 (ENSSMRG00000017660) #20	ENSSMRG00000017661 ##21	ENSSMRG00000017663 #21	CLINT1 (ENSSMRG00000017676) #22	LSM11 (ENSSMRG00000017677) #23	THG1L (ENSSMRG00000017679) #24	SOX30 (ENSSMRG00000017680) #25	ADAM19 (ENSSMRG00000017682) #26	NIPAL4 (ENSSMRG00000017684) #27	CYFIP2 (ENSSMRG00000017686) #29	ITK (ENSSMRG00000017690) #30	MED7 (ENSSMRG00000017725) #32	ENSSMRG00000017726	ENSSMRG00000017732	ENSSMRG00000017733
Toxicofera	ANCESTRAL SPECIES	3	ENSGT00940000157197	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01090000260260.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00950000182859.A.a.b.a.b ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C
Elapidae	ANCESTRAL SPECIES	2	ENSGT00940000157197	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01020000230731.A	ENSGT01020000230731.B.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.a.b.a ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000159577	ENSGT00940000161111
Elapidae_a	ANCESTRAL SPECIES	11	ENSGT00940000157197	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01020000230731.A	ENSGT01020000230731.B.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.a.b.a ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000159577	ENSGT00940000161111
Acanthophiinae	ANCESTRAL SPECIES	12	ENSGT00940000160186	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01000000217042	ENSGT01020000230731.A	ENSGT01020000230731.B.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.a.b.a ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000159577	ENSGT00940000161111
Mainland tiger snake	MODERN SPECIES	169											ENSNSUG00000019039 #20	ENSNSUG00000019040 #20	ENSNSUG00000019041 ##21	ENSNSUG00000019042 ##21	ENSNSUG00000019043	CLINT1 (ENSNSUG00000019044) #22	LSM11 (ENSNSUG00000019045) #23	THG1L (ENSNSUG00000019046) #24	SOX30 (ENSNSUG00000019047) #25	ADAM19 (ENSNSUG00000019048) #26	NIPAL4 (ENSNSUG00000019049) #27	ENSNSUG00000019050 #27	CYFIP2 (ENSNSUG00000019051) #29	ENSNSUG00000019053 #30	ENSNSUG00000019054 #30	MED7 (ENSNSUG00000019055) #32	ENSNSUG00000019056	SGCD (ENSNSUG00000019058) #34
Eastern brown snake	MODERN SPECIES	6	NOP16 (ENSPTXG00000000421)	ARL10 (ENSPTXG00000000409)	KIAA1191 (ENSPTXG00000000385)	ENSPTXG00000000373	THOC3 (ENSPTXG00000000353)	ENSPTXG00000000345	HRH2 (ENSPTXG00000000338)	ENSPTXG00000000323	ENSPTXG00000000310	ENSPTXG00000000297	ENSPTXG00000000289	UBLCP1 (ENSPTXG00000000273) #19	RNF145 (ENSPTXG00000000254) #20	ENSPTXG00000000247	EBF1 (ENSPTXG00000000092) ##21	CLINT1 (ENSPTXG00000000060) #22	LSM11 (ENSPTXG00000000047) #23	THG1L (ENSPTXG00000016242) #24	SOX30 (ENSPTXG00000016217) #25	ADAM19 (ENSPTXG00000016200) #26	ENSPTXG00000016190 #27	ENSPTXG00000016187 #27	CYFIP2 (ENSPTXG00000014047) #29	ENSPTXG00000014028 #30	ENSPTXG00000014026 #30	MED7 (ENSPTXG00000014024) #32	ENSPTXG00000014023	SGCD (ENSPTXG00000014000) #34	MRPL22 (ENSPTXG00000013999) #35	GEMIN5 (ENSPTXG00000013953) #36	CNOT8 (ENSPTXG00000013952) #37
Blue-lipped sea krait	MODERN SPECIES	7238																ENSLLTG00000003303 #22	LSM11 (ENSLLTG00000003292) #23	THG1L (ENSLLTG00000003273) #24	SOX30 (ENSLLTG00000016109) #25
Indian cobra	MODERN SPECIES	1	ARL10 (ENSNNAG00000017202)	KIAA1191 (ENSNNAG00000006813)	ENSNNAG00000006838	THOC3 (ENSNNAG00000006904)	ENSNNAG00000006915	HRH2 (ENSNNAG00000006925)	ENSNNAG00000006954	ENSNNAG00000006971	ENSNNAG00000006991	ENSNNAG00000007010	ENSNNAG00000007052	ENSNNAG00000007069	UBLCP1 (ENSNNAG00000007083) #19	RNF145 (ENSNNAG00000007136) #20	EBF1 (ENSNNAG00000007189) ##21	CLINT1 (ENSNNAG00000007510) #22	LSM11 (ENSNNAG00000007714) #23	THG1L (ENSNNAG00000007747) #24	SOX30 (ENSNNAG00000007783) #25	ADAM19 (ENSNNAG00000007865) #26	ENSNNAG00000008071 #27	CYFIP2 (ENSNNAG00000008140) #29	ENSNNAG00000008802 #30	MED7 (ENSNNAG00000008830) #32	ENSNNAG00000008848	SGCD (ENSNNAG00000008891) #34	ENSNNAG00000009098	ENSNNAG00000009113	MRPL22 (ENSNNAG00000009139) #35	GEMIN5 (ENSNNAG00000009290) #36	CNOT8 (ENSNNAG00000011094) #37
Lizard	MODERN SPECIES	819								ENSACAG00000043932	ENSACAG00000037290	UBLCP1 (ENSACAG00000002895) #19	RNF145 (ENSACAG00000002966) #20	ENSACAG00000036357 #21	EBF1 (ENSACAG00000003097) #21	ENSACAG00000043139	ENSACAG00000041128	CLINT1 (ENSACAG00000003205) #22	ENSACAG00000040027	LSM11 (ENSACAG00000003306) #23	THG1L (ENSACAG00000003330) #24	SOX30 (ENSACAG00000003369) #25	ADAM19 (ENSACAG00000003397) #26	NIPAL4 (ENSACAG00000038188) #27	ENSACAG00000035371	CYFIP2 (ENSACAG00000003535) #29	ITK (ENSACAG00000003690) #30	MED7 (ENSACAG00000003858) #32	ENSACAG00000028140	ENSACAG00000037855	TIMD4 (ENSACAG00000028639)	ENSACAG00000037403	ENSACAG00000039791
Archelosauria	ANCESTRAL SPECIES	15	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT00960000189302	ENSGT00940000165772.a	ENSGT00520000060726	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Cryptodira	ANCESTRAL SPECIES	15	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT00960000189302	ENSGT00940000165772.a	ENSGT00520000060726	ENSGT01090000260260	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C
Testudinoidea	ANCESTRAL SPECIES	5	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT00940000165772.a	ENSGT00960000191752	ENSGT01090000260442.B	ENSGT01030000235731.b.a	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C
Emydidae	ANCESTRAL SPECIES	11	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.b.a	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT00940000165772.a	ENSGT00960000191752	ENSGT01090000260442.B	ENSGT01030000235731.b.a	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609.o.a	ENSGT00940000163509.b	ENSGT00940000161609.p	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Three-toed box turtle	MODERN SPECIES	306	ARL10 (ENSTMTG00000007219)	SIMC1 (ENSTMTG00000007201)	THOC3 (ENSTMTG00000007185)	ENSTMTG00000007166	HRH2 (ENSTMTG00000007152)	ENSTMTG00000007145	ENSTMTG00000007127	ENSTMTG00000007093	ENSTMTG00000007073	ENSTMTG00000007051	ENSTMTG00000007022	ENSTMTG00000007002	UBLCP1 (ENSTMTG00000006972) #19	RNF145 (ENSTMTG00000006949) #20	EBF1 (ENSTMTG00000006849) #21	CLINT1 (ENSTMTG00000006816) #22	THG1L (ENSTMTG00000006790) #24	SOX30 (ENSTMTG00000006773) #25	ADAM19 (ENSTMTG00000006761) #26	NIPAL4 (ENSTMTG00000006746) #27	ENSTMTG00000006730	FNDC9 (ENSTMTG00000006707) #28	CYFIP2 (ENSTMTG00000005876) #29	ITK (ENSTMTG00000005477) #30	MED7 (ENSTMTG00000005445) #32	ENSTMTG00000005433	ENSTMTG00000005425	TIMD4 (ENSTMTG00000005410)	SGCD (ENSTMTG00000005371) #34	MRPL22 (ENSTMTG00000005356) #35	GEMIN5 (ENSTMTG00000005308) #36
painted turtle	MODERN SPECIES	733					ENSCPBG00000001194	ENSCPBG00000001208	ENSCPBG00000001220	ENSCPBG00000001246	ENSCPBG00000001278	ENSCPBG00000001334	ENSCPBG00000001344	ENSCPBG00000001362	UBLCP1 (ENSCPBG00000001379) #19	RNF145 (ENSCPBG00000001410) #20	EBF1 (ENSCPBG00000001442) #21	CLINT1 (ENSCPBG00000001495) #22	THG1L (ENSCPBG00000001551) #24	SOX30 (ENSCPBG00000001569) #25	ENSCPBG00000001580 #26	ENSCPBG00000001605 #26	NIPAL4 (ENSCPBG00000001617) #27	CYFIP2 (ENSCPBG00000001647) #29	FNDC9 (ENSCPBG00000001733) #28	ITK (ENSCPBG00000001769) #30	MED7 (ENSCPBG00000001955) #32	ENSCPBG00000001960	ENSCPBG00000001971	ENSCPBG00000001982	SGCD (ENSCPBG00000002013) #34	MRPL22 (ENSCPBG00000002068) #35	GEMIN5 (ENSCPBG00000002089) #36
Testudinidae	ANCESTRAL SPECIES	16	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT01060000249541	ENSGT00940000165772.a	ENSGT01090000263192	ENSGT01090000260442.A.a	ENSGT01090000260260	ENSGT00960000191752	ENSGT01090000260442.B	ENSGT01030000235731.b.a	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37	ENSGT00940000157328.C
Goode s thornscrub tortoise	MODERN SPECIES	22	ENSGEVG00005007820	THOC3 (ENSGEVG00005007918)	ENSGEVG00005007955	HRH2 (ENSGEVG00005007988)	ENSGEVG00005008001	ENSGEVG00005008028	ENSGEVG00005008094	ENSGEVG00005008196	ENSGEVG00005008224	ENSGEVG00005008253	ENSGEVG00005008281	ENSGEVG00005008321	UBLCP1 (ENSGEVG00005008342) #19	RNF145 (ENSGEVG00005008361) #20	EBF1 (ENSGEVG00005008405) #21	CLINT1 (ENSGEVG00005008507) #22	LSM11 (ENSGEVG00005008552) #23	THG1L (ENSGEVG00005008604) #24	SOX30 (ENSGEVG00005008624) #25	ADAM19 (ENSGEVG00005008807) #26	ENSGEVG00005010156 #27	ENSGEVG00005010198 #27	CYFIP2 (ENSGEVG00005010418) #29	FNDC9 (ENSGEVG00005011224) #28	ITK (ENSGEVG00005011244) #30	MED7 (ENSGEVG00005011286) #32	ENSGEVG00005011355	ENSGEVG00005011454	ENSGEVG00005011497	SGCD (ENSGEVG00005011549) #34	MRPL22 (ENSGEVG00005011686) #35
Abingdon island giant tortoise	MODERN SPECIES	2150		ENSCABG00000007312	ENSCABG00000007316	ENSCABG00000007318	ENSCABG00000007320	ENSCABG00000007323	ENSCABG00000007326	ENSCABG00000007328	ENSCABG00000007330	ENSCABG00000007331	ENSCABG00000007332	ENSCABG00000007334	UBLCP1 (ENSCABG00000007336) #19	RNF145 (ENSCABG00000007339) #20	EBF1 (ENSCABG00000007344) #21	CLINT1 (ENSCABG00000007465) #22	THG1L (ENSCABG00000007468) #24	SOX30 (ENSCABG00000007469) #25	ADAM19 (ENSCABG00000007470) #26	ENSCABG00000007471 #27	ENSCABG00000007472 #27	CYFIP2 (ENSCABG00000007475) #29	FNDC9 (ENSCABG00000007508) #28	ENSCABG00000007510 #30	ENSCABG00000007525 #30	ENSCABG00000007527 #30	MED7 (ENSCABG00000007528) #32	ENSCABG00000007529	ENSCABG00000007530	ENSCABG00000007531
Chinese turtle	MODERN SPECIES	2223													UBLCP1 (ENSPSIG00000006151) #19	RNF145 (ENSPSIG00000005875) #20	EBF1 (ENSPSIG00000005604) #21	CLINT1 (ENSPSIG00000005297) #22	LSM11 (ENSPSIG00000005234) #23	THG1L (ENSPSIG00000005072) #24	SOX30 (ENSPSIG00000004756) #25	ADAM19 (ENSPSIG00000004119) #26	NIPAL4 (ENSPSIG00000004111) #27	FNDC9 (ENSPSIG00000000198) #28	CYFIP2 (ENSPSIG00000004082) #29	ITK (ENSPSIG00000004038) #30	MED7 (ENSPSIG00000000188) #32	ENSPSIG00000000178	ENSPSIG00000004015	ENSPSIG00000003985	SGCD (ENSPSIG00000003964) #34	MRPL22 (ENSPSIG00000003917) #35	GEMIN5 (ENSPSIG00000003898) #36
Archosauria	ANCESTRAL SPECIES	17	ENSGT00910000144291	ENSGT00390000003426	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00960000189302	ENSGT00940000165772.a	ENSGT00520000060726	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000159345	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36
Aves	ANCESTRAL SPECIES	15	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00940000165772.a.a	ENSGT00520000060726	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Neognathae	ANCESTRAL SPECIES	14	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00940000165772.a.a	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Neognathae_b	ANCESTRAL SPECIES	16	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00520000060726	ENSGT01080000257888	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Passeriformes	ANCESTRAL SPECIES	14	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00530000064228	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00520000060726	ENSGT01080000257888	ENSGT00940000165772.b	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Passeriformes_d	ANCESTRAL SPECIES	15	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00530000064228	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00940000165772.a.a	ENSGT00520000060726	ENSGT01080000257888	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Passeriformes_g	ANCESTRAL SPECIES	15	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00530000064228	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00520000060726	ENSGT01080000257888	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01000000220229	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Medium ground finch	MODERN SPECIES	11	KIAA1191 (ENSGFOG00000001677)	ENSGFOG00000001661	THOC3 (ENSGFOG00000001632)	ENSGFOG00000001620	HRH2 (ENSGFOG00000001614)	ENSGFOG00000001607	ENSGFOG00000001600	ENSGFOG00000001585	ENSGFOG00000001561	ENSGFOG00000001554	ENSGFOG00000001544	UBLCP1 (ENSGFOG00000001526) #19	RNF145 (ENSGFOG00000001512) #20	ENSGFOG00000001510	EBF1 (ENSGFOG00000001340) #21	CLINT1 (ENSGFOG00000001320) #22	THG1L (ENSGFOG00000001316) #24	SOX30 (ENSGFOG00000001283) #25	ADAM19 (ENSGFOG00000001150) #26	NIPAL4 (ENSGFOG00000001072) #27	FNDC9 (ENSGFOG00000001068) #28	CYFIP2 (ENSGFOG00000001043) #29	ITK (ENSGFOG00000000984) #30	MED7 (ENSGFOG00000000972) #32	ENSGFOG00000000963	ENSGFOG00000000953	SGCD (ENSGFOG00000000945) #34	MRPL22 (ENSGFOG00000000923) #35	GEMIN5 (ENSGFOG00000000722) #36	CNOT8 (ENSGFOG00000000685) #37	FAXDC2 (ENSGFOG00000000676)
Passeroidea	ANCESTRAL SPECIES	15	ENSGT00950000182938.b.b.a	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00530000064228	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00520000060726	ENSGT01080000257888	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT01000000220229	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Zebra finch	MODERN SPECIES	4	KIAA1191 (ENSTGUG00000023710)	ENSTGUG00000000550	THOC3 (ENSTGUG00000000557)	ENSTGUG00000023893	HRH2 (ENSTGUG00000000559)	ENSTGUG00000000560	ENSTGUG00000025776	ENSTGUG00000027195	ENSTGUG00000000562	ENSTGUG00000000567	ENSTGUG00000000570	ENSTGUG00000000572	UBLCP1 (ENSTGUG00000000578) #19	RNF145 (ENSTGUG00000000584) #20	EBF1 (ENSTGUG00000000593) #21	CLINT1 (ENSTGUG00000000611) #22	LSM11 (ENSTGUG00000020439) #23	THG1L (ENSTGUG00000000618) #24	SOX30 (ENSTGUG00000000620) #25	ADAM19 (ENSTGUG00000000622) #26	NIPAL4 (ENSTGUG00000000631) #27	FNDC9 (ENSTGUG00000000654) #28	CYFIP2 (ENSTGUG00000000637) #29	ITK (ENSTGUG00000000655) #30	MED7 (ENSTGUG00000000675) #32	ENSTGUG00000028125	ENSTGUG00000000678	SGCD (ENSTGUG00000023803) #34	MRPL22 (ENSTGUG00000023797) #35	GEMIN5 (ENSTGUG00000000688) #36	CNOT8 (ENSTGUG00000000699) #37
Common canary	MODERN SPECIES	16	ENSSCAG00000013232	THOC3 (ENSSCAG00000013226)	ENSSCAG00000013221	HRH2 (ENSSCAG00000013218)	ENSSCAG00000013215	ENSSCAG00000013211	ENSSCAG00000013190	ENSSCAG00000013180	ENSSCAG00000013176	ENSSCAG00000013168	ENSSCAG00000013163	UBLCP1 (ENSSCAG00000013158) #19	RNF145 (ENSSCAG00000013151) #20	ENSSCAG00000013150	EBF1 (ENSSCAG00000013142) #21	CLINT1 (ENSSCAG00000013135) #22	THG1L (ENSSCAG00000013129) #24	SOX30 (ENSSCAG00000013120) #25	ADAM19 (ENSSCAG00000013049) #26	ENSSCAG00000013029	NIPAL4 (ENSSCAG00000013026) #27	ENSSCAG00000013025 #27	FNDC9 (ENSSCAG00000013020) #28	CYFIP2 (ENSSCAG00000013001) #29	ITK (ENSSCAG00000012994) #30	MED7 (ENSSCAG00000012989) #32	ENSSCAG00000012984	ENSSCAG00000012980	SGCD (ENSSCAG00000012971) #34	MRPL22 (ENSSCAG00000012965) #35	GEMIN5 (ENSSCAG00000012857) #36
Flycatcher	MODERN SPECIES	4	NOP16 (ENSFALG00000008553)	KIAA1191 (ENSFALG00000008550)	ENSFALG00000023171	THOC3 (ENSFALG00000008536)	CPLX2 (ENSFALG00000024604)	ENSFALG00000008525	ENSFALG00000027143	ENSFALG00000029028	ENSFALG00000008522	ENSFALG00000008519	ENSFALG00000008511	ENSFALG00000008509	UBLCP1 (ENSFALG00000008508) #19	RNF145 (ENSFALG00000008505) #20	EBF1 (ENSFALG00000008502) #21	CLINT1 (ENSFALG00000008488) #22	THG1L (ENSFALG00000028664) #24	SOX30 (ENSFALG00000008470) #25	ADAM19 (ENSFALG00000008445) #26	NIPAL4 (ENSFALG00000008417) #27	CYFIP2 (ENSFALG00000008410) #29	FNDC9 (ENSFALG00000014386) #28	ITK (ENSFALG00000008400) #30	MED7 (ENSFALG00000014379) #32	ENSFALG00000008393	ENSFALG00000008390	SGCD (ENSFALG00000008378) #34	MRPL22 (ENSFALG00000008367) #35	GEMIN5 (ENSFALG00000008360) #36	CNOT8 (ENSFALG00000008343) #37	FAXDC2 (ENSFALG00000008340)
Great tit	MODERN SPECIES	4	SIMC1 (ENSPMJG00000007597)	THOC3 (ENSPMJG00000007599)	ENSPMJG00000007601	HRH2 (ENSPMJG00000007605)	ENSPMJG00000007610	ENSPMJG00000007612	ENSPMJG00000007614	ENSPMJG00000007632	ENSPMJG00000007638	ENSPMJG00000007646	ENSPMJG00000007648	SPINK6 (ENSPMJG00000007649)	UBLCP1 (ENSPMJG00000007651) #19	RNF145 (ENSPMJG00000007652) #20	EBF1 (ENSPMJG00000007662) #21	CLINT1 (ENSPMJG00000007709) #22	LSM11 (ENSPMJG00000007710) #23	THG1L (ENSPMJG00000007711) #24	SOX30 (ENSPMJG00000007713) #25	ADAM19 (ENSPMJG00000007716) #26	NIPAL4 (ENSPMJG00000007737) #27	CYFIP2 (ENSPMJG00000007739) #29	FNDC9 (ENSPMJG00000007753) #28	ITK (ENSPMJG00000007756) #30	MED7 (ENSPMJG00000007759) #32	ENSPMJG00000007761	ENSPMJG00000007763	SGCD (ENSPMJG00000007788) #34	MRPL22 (ENSPMJG00000007789) #35	GEMIN5 (ENSPMJG00000007790) #36	CNOT8 (ENSPMJG00000007792) #37
Neognathae_c	ANCESTRAL SPECIES	19	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00940000165772.a.a	ENSGT00520000060726	ENSGT01080000257888	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Kakapo	MODERN SPECIES	6	THOC3 (ENSSHBG00005009477)	ENSSHBG00005009462	HRH2 (ENSSHBG00005009452)	ENSSHBG00005009440	ENSSHBG00005009431	ENSSHBG00005009419	ENSSHBG00005009403	ENSSHBG00005009392	ENSSHBG00005009383	ENSSHBG00005009377	ENSSHBG00005009369	SPINK6 (ENSSHBG00005009351)	UBLCP1 (ENSSHBG00005009334) #19	RNF145 (ENSSHBG00005009313) #20	EBF1 (ENSSHBG00005009234) #21	CLINT1 (ENSSHBG00005009197) #22	LSM11 (ENSSHBG00005009189) #23	THG1L (ENSSHBG00005009179) #24	SOX30 (ENSSHBG00005009165) #25	ADAM19 (ENSSHBG00005009123) #26	NIPAL4 (ENSSHBG00005009107) #27	FNDC9 (ENSSHBG00005009102) #28	CYFIP2 (ENSSHBG00005009091) #29	ITK (ENSSHBG00005009050) #30	MED7 (ENSSHBG00005009037) #32	ENSSHBG00005009033	SGCD (ENSSHBG00005008987) #34	ENSSHBG00005008958	MRPL22 (ENSSHBG00005008944) #35	GEMIN5 (ENSSHBG00005008928) #36	CNOT8 (ENSSHBG00005008914) #37
Golden eagle	MODERN SPECIES	14	ENSACCG00020016210	ENSACCG00020016216	HRH2 (ENSACCG00020016225)	ENSACCG00020016229	ENSACCG00020016238	ENSACCG00020016244	ENSACCG00020016254	ENSACCG00020016268	ENSACCG00020016274	ENSACCG00020016279	ENSACCG00020016286	UBLCP1 (ENSACCG00020016294) #19	ENSACCG00020016303	RNF145 (ENSACCG00020016312) #20	EBF1 (ENSACCG00020016347) #21	CLINT1 (ENSACCG00020016366) #22	LSM11 (ENSACCG00020016376) #23	THG1L (ENSACCG00020016383) #24	SOX30 (ENSACCG00020016391) #25	ADAM19 (ENSACCG00020016427) #26	NIPAL4 (ENSACCG00020011532) #27	FNDC9 (ENSACCG00020011550) #28	CYFIP2 (ENSACCG00020011575) #29	ITK (ENSACCG00020011652) #30	MED7 (ENSACCG00020011703) #32	ENSACCG00020011732	ENSACCG00020011783	SGCD (ENSACCG00020011873) #34	MRPL22 (ENSACCG00020011922) #35	GEMIN5 (ENSACCG00020012365) #36	CNOT8 (ENSACCG00020012722) #37
Galloanserae	ANCESTRAL SPECIES	14	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00940000165772.a.a	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Anatidae	ANCESTRAL SPECIES	15	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT01030000235706	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00940000165772.a.a	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00530000064225	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00390000013517 #28	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Pink-footed goose	MODERN SPECIES	9	KIAA1191 (ENSABRG00000016743)	ENSABRG00000016748	THOC3 (ENSABRG00000016754)	ENSABRG00000016760	HRH2 (ENSABRG00000016762)	ENSABRG00000016764	ENSABRG00000016765	ENSABRG00000016767	ENSABRG00000016769	ENSABRG00000016776	ENSABRG00000016782	ENSABRG00000016784	UBLCP1 (ENSABRG00000016791) #19	RNF145 (ENSABRG00000016793) #20	EBF1 (ENSABRG00000016815) #21	CLINT1 (ENSABRG00000016842) #22	LSM11 (ENSABRG00000016849) #23	THG1L (ENSABRG00000016860) #24	SOX30 (ENSABRG00000016864) #25	ADAM19 (ENSABRG00000016868) #26	NIPAL4 (ENSABRG00000016877) #27	CYFIP2 (ENSABRG00000016878) #29	FNDC9 (ENSABRG00000016886) #28	ITK (ENSABRG00000016889) #30	MED7 (ENSABRG00000016895) #32	ENSABRG00000016897	ENSABRG00000016902	SGCD (ENSABRG00000016926) #34	MRPL22 (ENSABRG00000016966) #35	GEMIN5 (ENSABRG00000016984) #36	CNOT8 (ENSABRG00000017071) #37
Duck	MODERN SPECIES	5	FAF2 (ENSAPLG00000009406)	ENSAPLG00000001082	ENSAPLG00000024606	KIAA1191 (ENSAPLG00000009342)	SIMC1 (ENSAPLG00000009331)	THOC3 (ENSAPLG00000017550)	ENSAPLG00000001223	ENSAPLG00000028713	ENSAPLG00000022398	ENSAPLG00000016124	ENSAPLG00000016711	ENSAPLG00000023164	UBLCP1 (ENSAPLG00000015997) #19	RNF145 (ENSAPLG00000015567) #20	EBF1 (ENSAPLG00000015476) #21	CLINT1 (ENSAPLG00000013481) #22	LSM11 (ENSAPLG00000026202) #23	ENSAPLG00000013772 #24	SOX30 (ENSAPLG00000013850) #25	ADAM19 (ENSAPLG00000013888) #26	NIPAL4 (ENSAPLG00000014781) #27	CYFIP2 (ENSAPLG00000002692) #29	ITK (ENSAPLG00000003452) #30	MED7 (ENSAPLG00000000724) #32	ENSAPLG00000004482	SGCD (ENSAPLG00000004614) #34	ENSAPLG00000004546	MRPL22 (ENSAPLG00000021380) #35	GEMIN5 (ENSAPLG00000006816) #36	CNOT8 (ENSAPLG00000007128) #37	FAXDC2 (ENSAPLG00000007416)
Phasianidae	ANCESTRAL SPECIES	14	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00930000151769	ENSGT00960000189302	ENSGT00940000165772.a.b	ENSGT00520000060726	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.h #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Phasianidae_b	ANCESTRAL SPECIES	18	ENSGT00390000003426.a	ENSGT00940000160017	ENSGT00390000000537	ENSGT00940000153451.a.a.b	ENSGT00940000158129	ENSGT00950000182938.b.a	ENSGT00940000158761	ENSGT00530000064228	ENSGT00940000165772.a.b	ENSGT00520000060726	ENSGT00940000165772.b	ENSGT00960000189440	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000161042 #25	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00390000013517 #28	ENSGT00500000044831.a.a.b.h #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32	ENSGT00940000161609	ENSGT00940000163509.b	ENSGT00940000158509 #34	ENSGT00390000002110 #35	ENSGT00620000088064 #36	ENSGT00390000000080.a.b #37
Turkey	MODERN SPECIES	6	CLTB (ENSMGAG00000004424)	ENSMGAG00000004718	ENSMGAG00000004726	ARL10 (ENSMGAG00000004741)	KIAA1191 (ENSMGAG00000004753)	THOC3 (ENSMGAG00000004766)	ENSMGAG00000004776	HRH2 (ENSMGAG00000015448)	ENSMGAG00000004783	ENSMGAG00000004801	ENSMGAG00000004813	ENSMGAG00000018234	ENSMGAG00000018303	UBLCP1 (ENSMGAG00000004832) #19	RNF145 (ENSMGAG00000004866) #20	CLINT1 (ENSMGAG00000004916) #22	THG1L (ENSMGAG00000004968) #24	SOX30 (ENSMGAG00000004987) #25	ADAM19 (ENSMGAG00000004996) #26	NIPAL4 (ENSMGAG00000005106) #27	FNDC9 (ENSMGAG00000015451) #28	CYFIP2 (ENSMGAG00000005110) #29	ITK (ENSMGAG00000005218) #30	MED7 (ENSMGAG00000015452) #32	ENSMGAG00000005269	ENSMGAG00000005270	SGCD (ENSMGAG00000018592) #34	ENSMGAG00000008161	ENSMGAG00000008140	ENSMGAG00000008131	ENSMGAG00000008102
Chicken	MODERN SPECIES	4	KIAA1191 (ENSGALG00010014312)	SIMC1 (ENSGALG00010014465)	THOC3 (ENSGALG00010014482)	CPLX2 (ENSGALG00010014492)	HRH2 (ENSGALG00010014576)	ENSGALG00010014619	ENSGALG00010014664	SPINK5 (ENSGALG00010014696)	SPINK7 (ENSGALG00010014724)	ENSGALG00010014842	ENSGALG00010014850	ENSGALG00010014885	UBLCP1 (ENSGALG00010014900) #19	RNF145 (ENSGALG00010014931) #20	EBF1 (ENSGALG00010012921) #21	CLINT1 (ENSGALG00010012945) #22	LSM11 (ENSGALG00010012968) #23	THG1L (ENSGALG00010016510) #24	SOX30 (ENSGALG00010016513) #25	ADAM19 (ENSGALG00010015002) #26	NIPAL4 (ENSGALG00010015020) #27	CYFIP2 (ENSGALG00010015037) #29	FNDC9 (ENSGALG00010015074) #28	ITK (ENSGALG00010015076) #30	MED7 (ENSGALG00010015333) #32	HAVCR1 (ENSGALG00010015098)	TIMD4 (ENSGALG00010017367)	SGCD (ENSGALG00010015483) #34	MRPL22 (ENSGALG00010015523) #35	GEMIN5 (ENSGALG00010015580) #36	CNOT8 (ENSGALG00010015686) #37
Japanese quail	MODERN SPECIES	4	ARL10 (ENSCJPG00005011216)	KIAA1191 (ENSCJPG00005011217)	ENSCJPG00005011219	THOC3 (ENSCJPG00005011222)	ENSCJPG00005011226	HRH2 (ENSCJPG00005011228)	ENSCJPG00005011229	ENSCJPG00005011230	ENSCJPG00005011232	ENSCJPG00005011234	ENSCJPG00005011235	ENSCJPG00005011237	UBLCP1 (ENSCJPG00005011252) #19	RNF145 (ENSCJPG00005011256) #20	EBF1 (ENSCJPG00005011260) #21	CLINT1 (ENSCJPG00005011334) #22	LSM11 (ENSCJPG00005011335) #23	SOX30 (ENSCJPG00005011336) #25	THG1L (ENSCJPG00005011337) #24	ADAM19 (ENSCJPG00005011338) #26	NIPAL4 (ENSCJPG00005011339) #27	ENSCJPG00005011340 #29	FNDC9 (ENSCJPG00005011341) #28	ENSCJPG00005011342 #29	ITK (ENSCJPG00005011343) #30	LCP2 (ENSCJPG00005011344)	KCNMB1 (ENSCJPG00005011346)	KCNIP1 (ENSCJPG00005011347)	GABRP (ENSCJPG00005011349)	ENSCJPG00005011350	TLX3 (ENSCJPG00005011354)
African ostrich	MODERN SPECIES	997	ARL10 (ENSSCUG00000013049)	KIAA1191 (ENSSCUG00000013048)	SIMC1 (ENSSCUG00000013046)	ENSSCUG00000013044	HRH2 (ENSSCUG00000013041)	ENSSCUG00000013039	ENSSCUG00000013034	ENSSCUG00000013033	ENSSCUG00000013032	ENSSCUG00000013031	SPINK6 (ENSSCUG00000013030)	UBLCP1 (ENSSCUG00000013029) #19	RNF145 (ENSSCUG00000013028) #20	ENSSCUG00000013026 #21	ENSSCUG00000013024 #21	CLINT1 (ENSSCUG00000013019) #22	LSM11 (ENSSCUG00000013018) #23	THG1L (ENSSCUG00000013016) #24	SOX30 (ENSSCUG00000013013) #25	ADAM19 (ENSSCUG00000013008) #26	NIPAL4 (ENSSCUG00000013004) #27	FNDC9 (ENSSCUG00000013001) #28	CYFIP2 (ENSSCUG00000012983) #29	ITK (ENSSCUG00000012978) #30	MED7 (ENSSCUG00000012973) #32	ENSSCUG00000012968	ENSSCUG00000012967	SGCD (ENSSCUG00000012961) #34	MRPL22 (ENSSCUG00000012957) #35	GEMIN5 (ENSSCUG00000012925) #36	CNOT8 (ENSSCUG00000012907) #37
Australian saltwater crocodile	MODERN SPECIES	34	ENSCPRG00005013541	THOC3 (ENSCPRG00005013537)	ENSCPRG00005013536	HRH2 (ENSCPRG00005013533)	ENSCPRG00005013529	ENSCPRG00005013516	ENSCPRG00005013512	ENSCPRG00005013510	ENSCPRG00005013507	SPINK6 (ENSCPRG00005013506)	ENSCPRG00005013504	ENSCPRG00005013502	UBLCP1 (ENSCPRG00005013500) #19	RNF145 (ENSCPRG00005013497) #20	EBF1 (ENSCPRG00005013387) #21	CLINT1 (ENSCPRG00005013355) #22	LSM11 (ENSCPRG00005013347) #23	THG1L (ENSCPRG00005013345) #24	SOX30 (ENSCPRG00005013341) #25	ADAM19 (ENSCPRG00005013333) #26	NIPAL4 (ENSCPRG00005013331) #27	ENSCPRG00005013330 #27	FNDC9 (ENSCPRG00005013326) #28	CYFIP2 (ENSCPRG00005013254) #29	ENSCPRG00005013241 #30	ENSCPRG00005013239	ENSCPRG00005013237 #30	MED7 (ENSCPRG00005013236) #32	ENSCPRG00005013229	ENSCPRG00005013225	ENSCPRG00005013221
Anura	ANCESTRAL SPECIES	220								ENSGT00940000157692 #15	ENSGT00940000157213 #16	ENSGT00940000156944 #17	ENSGT00390000012630.A #18	ENSGT00940000159140.c.b	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00940000159624 #26	ENSGT00940000159087 #27	ENSGT00500000044831.a.a.b #29	ENSGT00940000158850 #30	ENSGT00940000154444.B #32
Frog	MODERN SPECIES	3	nmur2 (ENSXETG00000001947)	ENSXETG00000043513	glra1 (ENSXETG00000001966)	ENSXETG00000049460	ENSXETG00000031824	ENSXETG00000038193	ENSXETG00000046538	ENSXETG00000032320	adra1b (ENSXETG00000043868) #17	IL12B (ENSXETG00000046319) #18	ENSXETG00000041467	ENSXETG00000032841	ublcp1 (ENSXETG00000016360) #19	rnf145 (ENSXETG00000016361) #20	ebf4 (ENSXETG00000034650) #21	clint1 (ENSXETG00000001496) #22	lsm11 (ENSXETG00000037324) #23	adam19 (ENSXETG00000034170) #26	nipal4 (ENSXETG00000001501) #27	cyfip2 (ENSXETG00000001502) #29	itk (ENSXETG00000033235) #30	med7 (ENSXETG00000001505) #32	ENSXETG00000046554	timd4 (ENSXETG00000046998)	ENSXETG00000045603	ENSXETG00000048544	ENSXETG00000033749	ENSXETG00000041800	prmt8 (ENSXETG00000016651)	ENSXETG00000042864	ENSXETG00000041672
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000007213	ENSLLEG00000007188	ENSLLEG00000007158 #15	ENSLLEG00000007134	TTC1 (ENSLLEG00000007081) #16	ADRA1B (ENSLLEG00000007056) #17	ENSLLEG00000007034	IL12B (ENSLLEG00000006990) #18	ENSLLEG00000006946	UBLCP1 (ENSLLEG00000006838) #19	ENSLLEG00000006810	RNF145 (ENSLLEG00000006621) #20	ENSLLEG00000006554	ENSLLEG00000006529 #21	ENSLLEG00000006373 #21	CLINT1 (ENSLLEG00000006185) #22	LSM11 (ENSLLEG00000006120) #23	ENSLLEG00000006108	ADAM19 (ENSLLEG00000006005) #26	ENSLLEG00000005859	C12orf4 (ENSLLEG00000005608)	ENSLLEG00000005553	ENSLLEG00000005544	ENSLLEG00000005520	FGF6 (ENSLLEG00000005498)	ENSLLEG00000005476	FGF23 (ENSLLEG00000005455)	ENSLLEG00000005429	CCND2 (ENSLLEG00000005348)	ENSLLEG00000005322	PARP11 (ENSLLEG00000005263)
Coelacanth	MODERN SPECIES	371													RNF145 (ENSLACG00000017538) #20	ENSLACG00000017503 #21	ENSLACG00000016818 #21	CLINT1 (ENSLACG00000015657) #22	LSM11 (ENSLACG00000015576) #23	THG1L (ENSLACG00000015528) #24	SOX30 (ENSLACG00000015447) #25	ADAM19 (ENSLACG00000015210) #26	NIPAL4 (ENSLACG00000015118) #27	FNDC9 (ENSLACG00000014861) #28	CYFIP2 (ENSLACG00000014673) #29	ITK (ENSLACG00000014337) #30	MED7 (ENSLACG00000014286) #32	ENSLACG00000014127	ENSLACG00000013453	ENSLACG00000011430 #34	MRPL22 (ENSLACG00000003356) #35	GEMIN5 (ENSLACG00000001950) #36	CNOT8 (ENSLACG00000000277) #37
Actinopterygii	ANCESTRAL SPECIES	103	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538	ENSGT00940000156641	ENSGT00390000007501	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00950000182859.A.a.a.a ##21	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.a.a	ENSGT00950000182859.A.a.b.a.b ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26
Neopterygii	ANCESTRAL SPECIES	24	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538.g	ENSGT00940000156641	ENSGT00390000007501	ENSGT00390000012630.A #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00950000182859.A.a.a.a ##21	ENSGT00940000156141.C	ENSGT00950000182932.A.b.a.b	ENSGT00950000182859.A.a.b.a.b ##21	ENSGT00940000155650 #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412	ENSGT00940000158996	ENSGT00390000005989.a	ENSGT00940000156198.c.b
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	DUPLICATION
Osteoglossocephalai	ANCESTRAL SPECIES	77	ENSGT00950000183067.a.b.a.d	ENSGT00940000156835	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000159538.g.b	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT00950000182859.A.a.b.a.b ##21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.a.b	ENSGT00390000014412.l
Osteoglossiformes	ANCESTRAL SPECIES	23	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000164576.b.a.a	ENSGT00550000074939	ENSGT00390000005589.a.b.n	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.k	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641	ENSGT00390000012630.A.b #18	ENSGT00940000157281.x #20	ENSGT00950000182859.A.a.b.b.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624.b #26	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT01030000238653	ENSGT00390000007125.b.h	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.a.a	ENSGT00940000154998.a.a.t
Asian bonytongue	MODERN SPECIES	4	WNT8A (ENSSFOG00015016952)	ENSSFOG00015016865	ENSSFOG00015027779	foxi3b (ENSSFOG00015017028)	nhp2 (ENSSFOG00015032223)	ENSSFOG00015017077	pttg1 (ENSSFOG00015017097) #9	grpel2 (ENSSFOG00015017109)	afap1l1a (ENSSFOG00015017127)	ablim3 (ENSSFOG00015017193)	SH3TC2 (ENSSFOG00015017275)	adrb2a (ENSSFOG00015017309)	ENSSFOG00015017328	RNF145 (ENSSFOG00015017406) #20	EBF1 (ENSSFOG00015017450) #21	clint1a (ENSSFOG00015017553) #22	LSM11 (ENSSFOG00015025495) #23	thg1l (ENSSFOG00015017619) #24	ADAM19 (ENSSFOG00015017640) #26	tcerg1a (ENSSFOG00015017666)	GPR151 (ENSSFOG00015017703)	PPP2R2B (ENSSFOG00015031806)	IL17B (ENSSFOG00015017749)	rpl26 (ENSSFOG00015026723)	ENSSFOG00015017779	CREBRF (ENSSFOG00015017854)	BNIP1 (ENSSFOG00015026362)	nkx2.5 (ENSSFOG00015017890)	STC2 (ENSSFOG00015017907)	CPEB4 (ENSSFOG00015017925)	NSG2 (ENSSFOG00015017958)
P. kingsleyae	MODERN SPECIES	407												ubtd2 (ENSPKIG00000002109)	il12ba (ENSPKIG00000002145) #18	RNF145 (ENSPKIG00000002192) #20	EBF1 (ENSPKIG00000002259) #21	clint1a (ENSPKIG00000002366) #22	LSM11 (ENSPKIG00000002386) #23	thg1l (ENSPKIG00000002407) #24	ENSPKIG00000002429 #26	ENSPKIG00000002484 #26	tcerg1a (ENSPKIG00000002573)	GPR151 (ENSPKIG00000002624)	PPP2R2B (ENSPKIG00000002647)	IL17B (ENSPKIG00000002711)	rpl26 (ENSPKIG00000002725)	atp6v0e1 (ENSPKIG00000002748)	CREBRF (ENSPKIG00000002819)	BNIP1 (ENSPKIG00000002855)	nkx2.5 (ENSPKIG00000002891)
Clupeocephala	ANCESTRAL SPECIES	11	ENSGT00940000156944.a.b #17	ENSGT00940000161609	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.k	ENSGT00940000161176	ENSGT00940000156835.l.b	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00940000159538.g.b	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT00950000182859.A.a.b.b.c.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k
Euteleosteomorpha	ANCESTRAL SPECIES	69	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Acanthomorphata	ANCESTRAL SPECIES	1	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Euacanthomorphacea	ANCESTRAL SPECIES	10	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Percomorphaceae	ANCESTRAL SPECIES	11	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Tiger tail seahorse	MODERN SPECIES	332	ENSHCOG00000000601	ENSHCOG00000002891	gria1a (ENSHCOG00000002856)	ENSHCOG00000002837	WNT8A (ENSHCOG00000002830)	ENSHCOG00000002816	ENSHCOG00000002802	foxi3b (ENSHCOG00000002793)	ENSHCOG00000002788	afap1l1a (ENSHCOG00000002775)	ablim3 (ENSHCOG00000002753)	SH3TC2 (ENSHCOG00000002730)	adrb2a (ENSHCOG00000000575)	il12ba (ENSHCOG00000002702) #18	ebf3a (ENSHCOG00000002667) #21	clint1a (ENSHCOG00000002647) #22	LSM11 (ENSHCOG00000002629) #23	thg1l (ENSHCOG00000002622) #24
Percomorphaceae_B	ANCESTRAL SPECIES	14	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Ovalentaria	ANCESTRAL SPECIES	15	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Ovalentaria_B	ANCESTRAL SPECIES	13	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Pomacentridae	ANCESTRAL SPECIES	4	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b.a	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Pomacentridae_A	ANCESTRAL SPECIES	17	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b.a	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Spiny chromis	DUPLICATION
Spiny chromis	MODERN SPECIES	1348												adrb2a (ENSAPOG00000012648)	ENSAPOG00000012641	il12ba (ENSAPOG00000012615) #18	EBF1 (ENSAPOG00000012596) #21	clint1a (ENSAPOG00000012458) #22	LSM11 (ENSAPOG00000012439) #23	thg1l (ENSAPOG00000012429) #24
Spiny chromis	MODERN SPECIES	2899																clint1a (ENSAPOG00000002243) #22	ENSAPOG00000002202 #23	thg1l (ENSAPOG00000002190) #24	ENSAPOG00000002174 #26
Amphiprion	ANCESTRAL SPECIES	26	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.b	ENSGT00940000157840.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b.a	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Clown anemonefish	MODERN SPECIES	3322	ENSAOCG00000001026	ENSAOCG00000014930	gria1a (ENSAOCG00000014969)	ENSAOCG00000001848	WNT8A (ENSAOCG00000015098)	WNT8A (ENSAOCG00000015126)	ENSAOCG00000015137	foxi3b (ENSAOCG00000015146)	ENSAOCG00000002171	afap1l1a (ENSAOCG00000015204)	ablim3 (ENSAOCG00000015274)	SH3TC2 (ENSAOCG00000015347)	adrb2a (ENSAOCG00000015368)	il12ba (ENSAOCG00000015400) #18	EBF1 (ENSAOCG00000015500) #21	clint1a (ENSAOCG00000015555) #22	LSM11 (ENSAOCG00000015560) #23	thg1l (ENSAOCG00000015583) #24	ENSAOCG00000015615 #26	GPR151 (ENSAOCG00000015625)	ENSAOCG00000015657	rpl26 (ENSAOCG00000015670)	atp6v0e1 (ENSAOCG00000015692)	nkx2.5 (ENSAOCG00000001088)	BNIP1 (ENSAOCG00000001092)	STC2 (ENSAOCG00000015774)	cpeb4a (ENSAOCG00000015830)	MSX2 (ENSAOCG00000015848)	DRD1 (ENSAOCG00000015856)	nek12 (ENSAOCG00000015866)	pin4 (ENSAOCG00000015898)
Orange clownfish	MODERN SPECIES	4	ENSAPEG00000010943	ENSAPEG00000010961	gria1a (ENSAPEG00000011016)	ENSAPEG00000011095	WNT8A (ENSAPEG00000011102)	WNT8A (ENSAPEG00000011151)	ENSAPEG00000011258	foxi3b (ENSAPEG00000011273)	ENSAPEG00000011292	afap1l1a (ENSAPEG00000011329)	ablim3 (ENSAPEG00000011381)	SH3TC2 (ENSAPEG00000011464)	adrb2a (ENSAPEG00000011560)	il12ba (ENSAPEG00000011572) #18	EBF1 (ENSAPEG00000011584) #21	clint1a (ENSAPEG00000011645) #22	LSM11 (ENSAPEG00000011659) #23	thg1l (ENSAPEG00000011671) #24	ENSAPEG00000011683 #26	GPR151 (ENSAPEG00000011707)	ENSAPEG00000011721	rpl26 (ENSAPEG00000011777)	atp6v0e1 (ENSAPEG00000011795)	BNIP1 (ENSAPEG00000011824)	nkx2.5 (ENSAPEG00000011853)	STC2 (ENSAPEG00000011880)	cpeb4a (ENSAPEG00000011894)	ENSAPEG00000011927	DRD1 (ENSAPEG00000011939)	nek12 (ENSAPEG00000011950)	pin4 (ENSAPEG00000011970)
Bicolor damselfish	MODERN SPECIES	400		ENSSPAG00000009173	WNT8A (ENSSPAG00000009138)	WNT8A (ENSSPAG00000009125)	ENSSPAG00000009101	ENSSPAG00000009088	foxi3b (ENSSPAG00000009081)	ENSSPAG00000009064	afap1l1a (ENSSPAG00000009032)	ENSSPAG00000009018	ablim3 (ENSSPAG00000008984)	SH3TC2 (ENSSPAG00000008941)	adrb2a (ENSSPAG00000008929)	il12ba (ENSSPAG00000008911) #18	EBF1 (ENSSPAG00000008807) #21	clint1a (ENSSPAG00000008774) #22	LSM11 (ENSSPAG00000008768) #23	thg1l (ENSSPAG00000008744) #24	ENSSPAG00000008702 #26	GPR151 (ENSSPAG00000008694)	ENSSPAG00000008661	rpl26 (ENSSPAG00000008645)	atp6v0e1 (ENSSPAG00000008628)	BNIP1 (ENSSPAG00000008611)	nkx2.5 (ENSSPAG00000008586)	STC2 (ENSSPAG00000008573)	cpeb4a (ENSSPAG00000008532)	msx2a (ENSSPAG00000008502)	DRD1 (ENSSPAG00000008498)	nek12 (ENSSPAG00000008491)	pin4 (ENSSPAG00000008483)
Cichlidae	ANCESTRAL SPECIES	8	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Pseudocrenilabrinae	ANCESTRAL SPECIES	17	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	20	ENSGT00440000033329.a.a.a	ENSGT01100000263971.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Haplochromini	ANCESTRAL SPECIES	14	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000179352	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Burton s mouthbrooder	MODERN SPECIES	284	gria1a (ENSHBUG00000000832)	ENSHBUG00000003561	ENSHBUG00000003592	WNT8A (ENSHBUG00000003609)	ENSHBUG00000003647	ENSHBUG00000003661	ENSHBUG00000003671	foxi3b (ENSHBUG00000003678)	ENSHBUG00000003689	afap1l1a (ENSHBUG00000003720)	ablim3 (ENSHBUG00000003776)	SH3TC2 (ENSHBUG00000003801)	adrb2a (ENSHBUG00000003812)	il12ba (ENSHBUG00000003827) #18	EBF1 (ENSHBUG00000003918) #21	clint1a (ENSHBUG00000003990) #22	LSM11 (ENSHBUG00000004016) #23	thg1l (ENSHBUG00000004025) #24	ENSHBUG00000004038 #26	GPR151 (ENSHBUG00000004045)	ENSHBUG00000004086	rpl26 (ENSHBUG00000004103)	atp6v0e1 (ENSHBUG00000004116)	BNIP1 (ENSHBUG00000004144)	nkx2.5 (ENSHBUG00000004161)	STC2 (ENSHBUG00000004169)	cpeb4a (ENSHBUG00000004215)	msx2a (ENSHBUG00000004219)	DRD1 (ENSHBUG00000004226)	nek12 (ENSHBUG00000004233)	pin4 (ENSHBUG00000004242)
Haplochromini_A	ANCESTRAL SPECIES	13	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000179352	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
P. nyererei	MODERN SPECIES	296	gria1a (ENSPNYG00000000152)	ENSPNYG00000000153	ENSPNYG00000000154	WNT8A (ENSPNYG00000000155)	WNT8A (ENSPNYG00000000156)	ENSPNYG00000000157	ENSPNYG00000000158	foxi3b (ENSPNYG00000000159)	ENSPNYG00000000160	afap1l1a (ENSPNYG00000000161)	ablim3 (ENSPNYG00000000162)	SH3TC2 (ENSPNYG00000000163)	adrb2a (ENSPNYG00000000164)	il12ba (ENSPNYG00000000165) #18	EBF1 (ENSPNYG00000000166) #21	clint1a (ENSPNYG00000000167) #22	LSM11 (ENSPNYG00000000168) #23	thg1l (ENSPNYG00000000169) #24	ADAM19 (ENSPNYG00000000170) #26	GPR151 (ENSPNYG00000000171)	ENSPNYG00000000172	rpl26 (ENSPNYG00000000173)	atp6v0e1 (ENSPNYG00000000174)	BNIP1 (ENSPNYG00000000175)	nkx2.5 (ENSPNYG00000000176)	STC2 (ENSPNYG00000000177)	cpeb4a (ENSPNYG00000000178)	msx2a (ENSPNYG00000000179)	DRD1 (ENSPNYG00000000180)	nek12 (ENSPNYG00000000181)	pin4 (ENSPNYG00000000182)
Haplochromini_B	ANCESTRAL SPECIES	7	ENSGT00440000033329.a.a.a	ENSGT01100000263971.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Eastern happy	MODERN SPECIES	11	ENSACLG00000000756	gria1a (ENSACLG00000000782)	ENSACLG00000000862	WNT8A (ENSACLG00000000875)	ENSACLG00000000927	ENSACLG00000000952	foxi3b (ENSACLG00000000960)	ENSACLG00000000973	ENSACLG00000000979	afap1l1a (ENSACLG00000000985)	ablim3 (ENSACLG00000001009)	SH3TC2 (ENSACLG00000001215)	adrb2a (ENSACLG00000001339)	il12ba (ENSACLG00000001346) #18	EBF1 (ENSACLG00000001374) #21	clint1a (ENSACLG00000001440) #22	LSM11 (ENSACLG00000001470) #23	thg1l (ENSACLG00000001490) #24	ENSACLG00000001513 #26	GPR151 (ENSACLG00000001567)	ENSACLG00000001580	rpl26 (ENSACLG00000001623)	atp6v0e1 (ENSACLG00000001656)	BNIP1 (ENSACLG00000001742)	nkx2.5 (ENSACLG00000001803)	STC2 (ENSACLG00000001808)	cpeb4a (ENSACLG00000001821)	pin4 (ENSACLG00000002103)	msx2a (ENSACLG00000002114)	DRD1 (ENSACLG00000002123)	nek12 (ENSACLG00000002128)
Zebra mbuna	MODERN SPECIES	1102	gria1a (ENSMZEG00005008118)	ENSMZEG00005008139	ENSMZEG00005008157	WNT8A (ENSMZEG00005008172)	ENSMZEG00005008185	ENSMZEG00005008197	foxi3b (ENSMZEG00005008209)	ENSMZEG00005008218	afap1l1a (ENSMZEG00005008238)	ablim3 (ENSMZEG00005008291)	SH3TC2 (ENSMZEG00005008353)	adrb2a (ENSMZEG00005008409)	ENSMZEG00005008456	il12ba (ENSMZEG00005008489) #18	EBF1 (ENSMZEG00005008525) #21	clint1a (ENSMZEG00005008620) #22	LSM11 (ENSMZEG00005008755) #23	thg1l (ENSMZEG00005008770) #24	ENSMZEG00005008796 #26	GPR151 (ENSMZEG00005008821)	ENSMZEG00005008829	rpl26 (ENSMZEG00005008869)	atp6v0e1 (ENSMZEG00005008895)	BNIP1 (ENSMZEG00005008908)	nkx2.5 (ENSMZEG00005008933)	STC2 (ENSMZEG00005008946)	cpeb4a (ENSMZEG00005008957)	msx2a (ENSMZEG00005009006)	DRD1 (ENSMZEG00005009012)	nek12 (ENSMZEG00005009027)	pin4 (ENSMZEG00005009035)
Lyretail cichlid	MODERN SPECIES	292	ENSNBRG00000018645	ENSNBRG00000018627	gria1a (ENSNBRG00000018592)	ENSNBRG00000018577	WNT8A (ENSNBRG00000018339)	ENSNBRG00000018267	ENSNBRG00000018261	foxi3b (ENSNBRG00000018251)	ENSNBRG00000018226	afap1l1a (ENSNBRG00000018184)	ablim3 (ENSNBRG00000018020)	SH3TC2 (ENSNBRG00000017949)	adrb2a (ENSNBRG00000017928)	il12ba (ENSNBRG00000017908) #18	EBF1 (ENSNBRG00000017864) #21	clint1a (ENSNBRG00000017805) #22	LSM11 (ENSNBRG00000017775) #23	thg1l (ENSNBRG00000017747) #24	ADAM19 (ENSNBRG00000016976) #26	GPR151 (ENSNBRG00000016675)	ENSNBRG00000016625	rpl26 (ENSNBRG00000016596)	atp6v0e1 (ENSNBRG00000016585)	BNIP1 (ENSNBRG00000016563)	nkx2.5 (ENSNBRG00000016525)	STC2 (ENSNBRG00000016511)	cpeb4a (ENSNBRG00000016474)	msx2a (ENSNBRG00000016440)	DRD1 (ENSNBRG00000016428)	nek12 (ENSNBRG00000016228)	pin4 (ENSNBRG00000016184)
Nile tilapia	MODERN SPECIES	11	ENSONIG00000017600	gria1a (ENSONIG00000017606)	ENSONIG00000037471	ENSONIG00000017615	ENSONIG00000027224	ENSONIG00000017617	ENSONIG00000029990	foxi3b (ENSONIG00000017618)	ENSONIG00000029286	afap1l1a (ENSONIG00000017624)	ablim3 (ENSONIG00000017632)	SH3TC2 (ENSONIG00000017645)	adrb2a (ENSONIG00000020577)	il12ba (ENSONIG00000017652) #18	EBF1 (ENSONIG00000017655) #21	clint1a (ENSONIG00000017658) #22	LSM11 (ENSONIG00000017657) #23	thg1l (ENSONIG00000017663) #24	ENSONIG00000017665 #26	GPR151 (ENSONIG00000029838)	ENSONIG00000017671	rpl26 (ENSONIG00000017676)	atp6v0e1 (ENSONIG00000028024)	BNIP1 (ENSONIG00000017678)	nkx2.5 (ENSONIG00000017679)	stc2 (ENSONIG00000029953)	cpeb4a (ENSONIG00000017682)	msx2a (ENSONIG00000017685)	nek12 (ENSONIG00000017689)	faf2 (ENSONIG00000017695)	rnf44 (ENSONIG00000028427)
Midas cichlid	MODERN SPECIES	189	med7 (ENSACIG00000015483) #32	ENSACIG00000015494	gria1a (ENSACIG00000015526)	ENSACIG00000015570	WNT8A (ENSACIG00000015581)	ENSACIG00000015599	ENSACIG00000015615	foxi3b (ENSACIG00000015632)	ENSACIG00000015669	afap1l1a (ENSACIG00000015699)	ablim3 (ENSACIG00000015752)	SH3TC2 (ENSACIG00000015791)	adrb2a (ENSACIG00000015862)	il12ba (ENSACIG00000015872) #18	EBF1 (ENSACIG00000015886) #21	clint1a (ENSACIG00000015914) #22	LSM11 (ENSACIG00000015937) #23	thg1l (ENSACIG00000015946) #24	ADAM19 (ENSACIG00000016009) #26	GPR151 (ENSACIG00000016712)	ENSACIG00000016718	rpl26 (ENSACIG00000016752)	atp6v0e1 (ENSACIG00000016760)	BNIP1 (ENSACIG00000016771)	nkx2.5 (ENSACIG00000016790)	STC2 (ENSACIG00000016800)	cpeb4a (ENSACIG00000016815)	ENSACIG00000016833	DRD1 (ENSACIG00000016838)	ENSACIG00000016844	pin4 (ENSACIG00000016863)
Atherinomorphae	ANCESTRAL SPECIES	9	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157197
Cyprinodontiformes	ANCESTRAL SPECIES	8	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157197
Aplocheiloidei	ANCESTRAL SPECIES	98				ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B.f	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157197
Mangrove rivulus	MODERN SPECIES	188		ENSKMAG00000009857	WNT8A (ENSKMAG00000009796)	WNT8A (ENSKMAG00000009767)	ENSKMAG00000009743	ENSKMAG00000009718	foxi3b (ENSKMAG00000009703)	ENSKMAG00000009662	ENSKMAG00000009626	afap1l1a (ENSKMAG00000009542)	ablim3 (ENSKMAG00000009437)	SH3TC2 (ENSKMAG00000009379)	adrb2a (ENSKMAG00000009371)	il12ba (ENSKMAG00000009319) #18	EBF1 (ENSKMAG00000009270) #21	clint1a (ENSKMAG00000009195) #22	LSM11 (ENSKMAG00000009181) #23	thg1l (ENSKMAG00000009156) #24	ADAM19 (ENSKMAG00000009132) #26	GPR151 (ENSKMAG00000009118)	ENSKMAG00000009079	rpl26 (ENSKMAG00000009061)	atp6v0e1 (ENSKMAG00000009053)	BNIP1 (ENSKMAG00000009017)	nkx2.5 (ENSKMAG00000009000)	STC2 (ENSKMAG00000008973)	ENSKMAG00000008902	DRD1 (ENSKMAG00000008861)	nek12 (ENSKMAG00000008848)	pin4 (ENSKMAG00000008835)	faf2 (ENSKMAG00000008803)
Turquoise killifish	MODERN SPECIES	28															Nfu_g_1_003593 (ENSNFUG00015021941) #21	CLINT1A (ENSNFUG00015021908) #22	LSM11 (ENSNFUG00015021905) #23	thg1l (ENSNFUG00015021898) #24	ADAM19B (ENSNFUG00015021621) #26	ENSNFUG00015021588	GPR151 (ENSNFUG00015021582)	ENSNFUG00015021579
Cyprinodontoidei	ANCESTRAL SPECIES	19	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
Poeciliinae	ANCESTRAL SPECIES	11	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
Poecilia	ANCESTRAL SPECIES	21	ENSGT00940000154444.B #32	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
NAME_6	ANCESTRAL SPECIES	17											ENSGT00950000182850.a.b.a.b.a.b.f	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b.f	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
Amazon molly	MODERN SPECIES	622								gria1a (ENSPFOG00000000190)	ENSPFOG00000023621	ENSPFOG00000000198	ENSPFOG00000022035	SH3TC2 (ENSPFOG00000000208)	adrb2a (ENSPFOG00000020975)	il12ba (ENSPFOG00000000264) #18	EBF1 (ENSPFOG00000000294) #21	clint1a (ENSPFOG00000000551) #22	LSM11 (ENSPFOG00000000512) #23	thg1l (ENSPFOG00000000528) #24	thg1l (ENSPFOG00000000643) #24	ENSPFOG00000000776 #26	GPR151 (ENSPFOG00000020976)	GPR151 (ENSPFOG00000000955)
Sailfin molly	MODERN SPECIES	728										ENSPLAG00000019591	SH3TC2 (ENSPLAG00000019580)	adrb2a (ENSPLAG00000019528)	ENSPLAG00000019522	il12ba (ENSPLAG00000019510) #18	EBF1 (ENSPLAG00000019486) #21	clint1a (ENSPLAG00000019440) #22	LSM11 (ENSPLAG00000019434) #23	thg1l (ENSPLAG00000019419) #24
Guppy	MODERN SPECIES	440	itk (ENSPREG00000020456) #30	ENSPREG00000020443	ENSPREG00000020435	gria1a (ENSPREG00000020418)	WNT8A (ENSPREG00000020385)	ENSPREG00000020370	ENSPREG00000020363	foxi3b (ENSPREG00000020357)	ENSPREG00000020347	afap1l1a (ENSPREG00000020266)	ablim3 (ENSPREG00000020058)	SH3TC2 (ENSPREG00000019866)	adrb2a (ENSPREG00000019818)	il12ba (ENSPREG00000019792) #18	EBF1 (ENSPREG00000019762) #21	clint1a (ENSPREG00000019704) #22	LSM11 (ENSPREG00000019696) #23	thg1l (ENSPREG00000019678) #24	ENSPREG00000019651 #26	ENSPREG00000019638	ENSPREG00000019594	rpl26 (ENSPREG00000019574)	atp6v0e1 (ENSPREG00000019563)	BNIP1 (ENSPREG00000019539)	nkx2.5 (ENSPREG00000019530)	STC2 (ENSPREG00000019524)	ENSPREG00000019512	cpeb4a (ENSPREG00000019466)	ENSPREG00000019444	pin4 (ENSPREG00000019423)	faf2 (ENSPREG00000019408)
Platyfish	MODERN SPECIES	15	ENSXMAG00000026788	ENSXMAG00000029503	ENSXMAG00000010476	WNT8A (ENSXMAG00000010466)	WNT8A (ENSXMAG00000010465)	ENSXMAG00000023574	foxi3b (ENSXMAG00000010462)	ENSXMAG00000027368	ENSXMAG00000010450	afap1l1a (ENSXMAG00000010435)	ablim3 (ENSXMAG00000010396)	SH3TC2 (ENSXMAG00000010375)	adrb2a (ENSXMAG00000019510)	il12ba (ENSXMAG00000010355) #18	EBF1 (ENSXMAG00000010351) #21	clint1a (ENSXMAG00000008223) #22	LSM11 (ENSXMAG00000008238) #23	thg1l (ENSXMAG00000008240) #24	ENSXMAG00000010315 #26	ENSXMAG00000029074	rpl26 (ENSXMAG00000010281)	atp6v0e1 (ENSXMAG00000021044)	BNIP1 (ENSXMAG00000023412)	nkx2.5 (ENSXMAG00000010266)	STC2 (ENSXMAG00000010263)	cpeb4a (ENSXMAG00000010247)	DRD1 (ENSXMAG00000019506)	pin4 (ENSXMAG00000010241)	faf2 (ENSXMAG00000010225)	rnf44 (ENSXMAG00000025911)	ENSXMAG00000019505
NAME_4	ANCESTRAL SPECIES	20	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
Mummichog	MODERN SPECIES	235															EBF1 (ENSFHEG00000007292) #21	clint1a (ENSFHEG00000007304) #22	ENSFHEG00000007324 #23	thg1l (ENSFHEG00000007339) #24	ENSFHEG00000007352 #26	GPR151 (ENSFHEG00000007363)	ENSFHEG00000007377	rpl26 (ENSFHEG00000007399)	BNIP1 (ENSFHEG00000007429)	nkx2.5 (ENSFHEG00000007444)	STC2 (ENSFHEG00000007460)	cpeb4a (ENSFHEG00000007532)	DRD1 (ENSFHEG00000007554)	ENSFHEG00000007608	pin4 (ENSFHEG00000007619)	faf2 (ENSFHEG00000007655)	rnf44 (ENSFHEG00000007679)
Sheepshead minnow	MODERN SPECIES	120															EBF1 (ENSCVAG00000011669) #21	clint1a (ENSCVAG00000011682) #22	LSM11 (ENSCVAG00000011703) #23	thg1l (ENSCVAG00000011708) #24	ENSCVAG00000013235 #26	GPR151 (ENSCVAG00000013260)	ENSCVAG00000013279	rpl26 (ENSCVAG00000013291)	atp6v0e1 (ENSCVAG00000013296)	BNIP1 (ENSCVAG00000013320)	nkx2.5 (ENSCVAG00000013333)	ENSCVAG00000013345	DRD1 (ENSCVAG00000013353)	pin4 (ENSCVAG00000013371)	faf2 (ENSCVAG00000013408)	ENSCVAG00000013418	rnf44 (ENSCVAG00000013430)
Oryzias	ANCESTRAL SPECIES	17	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
Oryzias_b	ANCESTRAL SPECIES	20	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00990000205642	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197	ENSGT00940000158553.b.b
Indian medaka	MODERN SPECIES	16	ENSOMEG00000012395	gria1a (ENSOMEG00000012345)	ENSOMEG00000012270	WNT8A (ENSOMEG00000012256)	WNT8A (ENSOMEG00000012222)	ENSOMEG00000012202	foxi3b (ENSOMEG00000012195)	ENSOMEG00000012177	afap1l1a (ENSOMEG00000012122)	ablim3 (ENSOMEG00000011979)	SH3TC2 (ENSOMEG00000011756)	adrb2a (ENSOMEG00000011673)	il12ba (ENSOMEG00000011666) #18	EBF1 (ENSOMEG00000011625) #21	ENSOMEG00000011527	clint1a (ENSOMEG00000011516) #22	LSM11 (ENSOMEG00000011492) #23	thg1l (ENSOMEG00000011477) #24	ENSOMEG00000011448 #26	GPR151 (ENSOMEG00000011385)	ENSOMEG00000011370	rpl26 (ENSOMEG00000011284)	atp6v0e1 (ENSOMEG00000011268)	BNIP1 (ENSOMEG00000011257)	nkx2.5 (ENSOMEG00000011234)	STC2 (ENSOMEG00000011223)	cpeb4a (ENSOMEG00000011206)	DRD1 (ENSOMEG00000011170)	pin4 (ENSOMEG00000011141)	faf2 (ENSOMEG00000011110)	rnf44 (ENSOMEG00000011064)
Javanese ricefish	MODERN SPECIES	1	med7 (ENSOJAG00000022709) #32	ENSOJAG00000022715	gria1a (ENSOJAG00000005934)	ENSOJAG00000006364	WNT8A (ENSOJAG00000006416)	ENSOJAG00000006678	foxi3b (ENSOJAG00000006691)	ENSOJAG00000006709	afap1l1a (ENSOJAG00000006732)	ablim3 (ENSOJAG00000006796)	SH3TC2 (ENSOJAG00000006962)	adrb2a (ENSOJAG00000007009)	il12ba (ENSOJAG00000007054) #18	EBF1 (ENSOJAG00000007315) #21	ENSOJAG00000008070	clint1a (ENSOJAG00000008106) #22	LSM11 (ENSOJAG00000008134) #23	thg1l (ENSOJAG00000008145) #24	ENSOJAG00000008293 #26	GPR151 (ENSOJAG00000009747)	ENSOJAG00000009776	rpl26 (ENSOJAG00000010114)	atp6v0e1 (ENSOJAG00000010132)	BNIP1 (ENSOJAG00000010159)	nkx2.5 (ENSOJAG00000010200)	STC2 (ENSOJAG00000010214)	cpeb4a (ENSOJAG00000010241)	DRD1 (ENSOJAG00000010314)	pin4 (ENSOJAG00000010324)	faf2 (ENSOJAG00000010332)	rnf44 (ENSOJAG00000010371)
Oryzias_a	ANCESTRAL SPECIES	22	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00940000182228	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197
Japanese Medaka HdrR	MODERN SPECIES	1	ENSORLG00000007735	ENSORLG00000024316	gria1a (ENSORLG00000007719)	ENSORLG00000007678	WNT8A (ENSORLG00000007667)	WNT8A (ENSORLG00000007648)	ENSORLG00000025412	foxi3b (ENSORLG00000028275)	ENSORLG00000007644	afap1l1a (ENSORLG00000007636)	ablim3 (ENSORLG00000007590)	SH3TC2 (ENSORLG00000007524)	adrb2a (ENSORLG00000007484)	il12ba (ENSORLG00000007477) #18	EBF1 (ENSORLG00000007471) #21	clint1a (ENSORLG00000007455) #22	LSM11 (ENSORLG00000007434) #23	thg1l (ENSORLG00000007424) #24	ENSORLG00000007413 #26	GPR151 (ENSORLG00000007403)	ENSORLG00000007398	rpl26 (ENSORLG00000007374)	atp6v0e1 (ENSORLG00000007362)	BNIP1 (ENSORLG00000007358)	nkx2.5 (ENSORLG00000007346)	ENSORLG00000022613	STC2 (ENSORLG00000023476)	cpeb4a (ENSORLG00000007328)	ENSORLG00000007303	pin4 (ENSORLG00000007301)	faf2 (ENSORLG00000007289)
Chinese medaka	MODERN SPECIES	25	ENSOSIG00000000362	ENSOSIG00000000358	gria1a (ENSOSIG00000000157)	ENSOSIG00000000038	ENSOSIG00000000034	WNT8A (ENSOSIG00000000031)	ENSOSIG00000000028	foxi3b (ENSOSIG00000000022)	ENSOSIG00000022301	afap1l1a (ENSOSIG00000022298)	ablim3 (ENSOSIG00000022277)	SH3TC2 (ENSOSIG00000022265)	adrb2a (ENSOSIG00000022258)	il12ba (ENSOSIG00000022253) #18	EBF1 (ENSOSIG00000022001) #21	clint1a (ENSOSIG00000021908) #22	LSM11 (ENSOSIG00000021896) #23	thg1l (ENSOSIG00000021893) #24	ADAM19 (ENSOSIG00000021886) #26	ENSOSIG00000021855	GPR151 (ENSOSIG00000021853)	ENSOSIG00000021439	rpl26 (ENSOSIG00000021426)	atp6v0e1 (ENSOSIG00000021424)	BNIP1 (ENSOSIG00000021421)	nkx2.5 (ENSOSIG00000021419)	ENSOSIG00000021417	STC2 (ENSOSIG00000021416)	cpeb4a (ENSOSIG00000021387)	DRD1 (ENSOSIG00000021374)	pin4 (ENSOSIG00000021373)
Percomorphaceae_C	ANCESTRAL SPECIES	16	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Eupercaria	ANCESTRAL SPECIES	12	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Eupecaria_A	ANCESTRAL SPECIES	13	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Ballan wrasse	MODERN SPECIES	289															EBF1 (ENSLBEG00000022239) #21	clint1a (ENSLBEG00000022284) #22	LSM11 (ENSLBEG00000022318) #23	thg1l (ENSLBEG00000022336) #24	ADAM19 (ENSLBEG00000022368) #26	GPR151 (ENSLBEG00000022408)	ENSLBEG00000022450	rpl26 (ENSLBEG00000022531)	atp6v0e1 (ENSLBEG00000022577)	BNIP1 (ENSLBEG00000022716)	nkx2.5 (ENSLBEG00000022772)	STC2 (ENSLBEG00000022787)	ENSLBEG00000022823	msx2a (ENSLBEG00000022889)	DRD1 (ENSLBEG00000022904)	ENSLBEG00000022922	ENSLBEG00000022942
Eupecaria_B	ANCESTRAL SPECIES	13	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Perciformes	ANCESTRAL SPECIES	13	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Cottioidei	ANCESTRAL SPECIES	9	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT01100000264027	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Lumpfish	MODERN SPECIES	1	ENSCLMG00005021568	ENSCLMG00005021569	gria1a (ENSCLMG00005021575)	ENSCLMG00005021629	WNT8A (ENSCLMG00005021630)	ENSCLMG00005021632	ENSCLMG00005021634	foxi3b (ENSCLMG00005021635)	ENSCLMG00005021636	afap1l1a (ENSCLMG00005021637)	ablim3 (ENSCLMG00005021641)	SH3TC2 (ENSCLMG00005021648)	adrb2a (ENSCLMG00005021649)	il12ba (ENSCLMG00005021650) #18	EBF1 (ENSCLMG00005021682) #21	clint1a (ENSCLMG00005021705) #22	LSM11 (ENSCLMG00005021706) #23	thg1l (ENSCLMG00005021707) #24	ENSCLMG00005021709 #26	GPR151 (ENSCLMG00005021710)	ENSCLMG00005021711	rpl26 (ENSCLMG00005021712)	atp6v0e1 (ENSCLMG00005021713)	BNIP1 (ENSCLMG00005021715)	nkx2.5 (ENSCLMG00005021716)	STC2 (ENSCLMG00005021717)	cpeb4a (ENSCLMG00005021721)	MSX2 (ENSCLMG00005021753)	DRD1 (ENSCLMG00005021754)	nek12 (ENSCLMG00005021755)	pin4 (ENSCLMG00005004266)
Stickleback	MODERN SPECIES	3	ENSGACG00000018483	gria1a (ENSGACG00000018480)	WNT8A (ENSGACG00000018477)	ENSGACG00000018475	foxi3b (ENSGACG00000018474)	ENSGACG00000018471	afap1l1a (ENSGACG00000018467)	ENSGACG00000018466	ENSGACG00000018464	ablim3 (ENSGACG00000018461)	SH3TC2 (ENSGACG00000018457)	ENSGACG00000018456	adrb2a (ENSGACG00000018455)	il12ba (ENSGACG00000018453) #18	EBF1 (ENSGACG00000018450) #21	clint1a (ENSGACG00000018449) #22	LSM11 (ENSGACG00000018447) #23	thg1l (ENSGACG00000018445) #24	ADAM19 (ENSGACG00000018444) #26	ENSGACG00000018443	GPR151 (ENSGACG00000018442)	ENSGACG00000018440	rpl26 (ENSGACG00000018439)	atp6v0e1 (ENSGACG00000018438)	BNIP1 (ENSGACG00000018435)	nkx2.5 (ENSGACG00000018433)	STC2 (ENSGACG00000018432)	cpeb4a (ENSGACG00000018422)	msx2a (ENSGACG00000018421)	DRD1 (ENSGACG00000018420)	nek12 (ENSGACG00000018419)
Perciformes_a	ANCESTRAL SPECIES	11	ENSGT00940000154444.B #32	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Channel bull blenny	MODERN SPECIES	1	ENSCGOG00000019787	gria1a (ENSCGOG00000016429)	ENSCGOG00000016347	ENSCGOG00000016341	WNT8A (ENSCGOG00000016336)	foxi3b (ENSCGOG00000016314)	ENSCGOG00000016304	foxi3b (ENSCGOG00000016302)	ENSCGOG00000016283	afap1l1a (ENSCGOG00000016278)	ablim3 (ENSCGOG00000015561)	SH3TC2 (ENSCGOG00000015522)	adrb2a (ENSCGOG00000015521)	il12ba (ENSCGOG00000015518) #18	EBF1 (ENSCGOG00000014632) #21	clint1a (ENSCGOG00000014613) #22	LSM11 (ENSCGOG00000014611) #23	thg1l (ENSCGOG00000014601) #24	ADAM19 (ENSCGOG00000014207) #26	GPR151 (ENSCGOG00000014195)	ENSCGOG00000014103	rpl26 (ENSCGOG00000014091)	atp6v0e1 (ENSCGOG00000014083)	nkx2.5 (ENSCGOG00000014081)	BNIP1 (ENSCGOG00000014077)	STC2 (ENSCGOG00000014075)	cpeb4a (ENSCGOG00000013719)	msx2a (ENSCGOG00000013709)	DRD1 (ENSCGOG00000013708)	nek12 (ENSCGOG00000013526)	pin4 (ENSCGOG00000013511)
Pike perch	DUPLICATION
Pike perch	MODERN SPECIES	662																clint1a (ENSSLUG00000008837) #22	LSM11 (ENSSLUG00000008841) #23	thg1l (ENSSLUG00000008842) #24
Pike perch	MODERN SPECIES	176	gria1a (ENSSLUG00000002964)	ENSSLUG00000003387	WNT8A (ENSSLUG00000003407)	WNT8A (ENSSLUG00000003440)	ENSSLUG00000003452	foxi3b (ENSSLUG00000003468)	ENSSLUG00000003489	afap1l1a (ENSSLUG00000003524)	ablim3 (ENSSLUG00000003636)	ENSSLUG00000004444	ENSSLUG00000004448	SH3TC2 (ENSSLUG00000004490)	adrb2a (ENSSLUG00000004567)	il12ba (ENSSLUG00000004572) #18	EBF1 (ENSSLUG00000004604) #21	clint1a (ENSSLUG00000004683) #22	thg1l (ENSSLUG00000004723) #24
Eupecaria_C	ANCESTRAL SPECIES	12	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Gilthead seabream	MODERN SPECIES	9	gria1a (ENSSAUG00010027364)	ENSSAUG00010027406	WNT8A (ENSSAUG00010027407)	ENSSAUG00010027409	ENSSAUG00010027410	ENSSAUG00010027412	foxi3b (ENSSAUG00010027413)	ENSSAUG00010027414	afap1l1a (ENSSAUG00010027415)	ablim3 (ENSSAUG00010027425)	SH3TC2 (ENSSAUG00010027450)	adrb2a (ENSSAUG00010027453)	ENSSAUG00010027454	il12ba (ENSSAUG00010027455) #18	EBF1 (ENSSAUG00010027457) #21	clint1a (ENSSAUG00010027473) #22	LSM11 (ENSSAUG00010027474) #23	thg1l (ENSSAUG00010027475) #24	ENSSAUG00010027476 #26	GPR151 (ENSSAUG00010027479)	ENSSAUG00010027485	rpl26 (ENSSAUG00010027493)	atp6v0e1 (ENSSAUG00010027496)	BNIP1 (ENSSAUG00010027497)	nkx2.5 (ENSSAUG00010027499)	STC2 (ENSSAUG00010027500)	cpeb4a (ENSSAUG00010027501)	msx2a (ENSSAUG00010027502)	DRD1 (ENSSAUG00010027503)	nek12 (ENSSAUG00010027504)	pin4 (ENSSAUG00010027507)
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	14	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
European seabass	MODERN SPECIES	12	ENSDLAG00005008309	gria1a (ENSDLAG00005007100)	ENSDLAG00005007043	ENSDLAG00005007017	ENSDLAG00005006995	ENSDLAG00005034197	ENSDLAG00005027845	foxi3b (ENSDLAG00005006986)	ENSDLAG00005006968	afap1l1a (ENSDLAG00005006940)	ablim3 (ENSDLAG00005004497)	SH3TC2 (ENSDLAG00005004142)	adrb2a (ENSDLAG00005028975)	il12ba (ENSDLAG00005004098) #18	EBF1 (ENSDLAG00005003583) #21	clint1a (ENSDLAG00005003411) #22	LSM11 (ENSDLAG00005003399) #23	ENSDLAG00005029288 #24	ENSDLAG00005002241 #26	ENSDLAG00005031126	ENSDLAG00005001619	ENSDLAG00005033905	nkx2.5 (ENSDLAG00005031252)	ENSDLAG00005001491	cpeb4a (ENSDLAG00005001293)	msx2a (ENSDLAG00005001228)	ENSDLAG00005030567	ENSDLAG00005028564	ENSDLAG00005020802	ENSDLAG00005020799	faf2 (ENSDLAG00005020783)
Large yellow croaker	MODERN SPECIES		itk (ENSLCRG00005001339) #30	ENSLCRG00005001303	ENSLCRG00005001302	gria1a (ENSLCRG00005001255)	ENSLCRG00005001244	WNT8A (ENSLCRG00005001238)	ENSLCRG00005001234	foxi3b (ENSLCRG00005001232)	ENSLCRG00005001229	afap1l1a (ENSLCRG00005001224)	ablim3 (ENSLCRG00005001204)	SH3TC2 (ENSLCRG00005001178)	adrb2a (ENSLCRG00005001170)	il12ba (ENSLCRG00005001169) #18	EBF1 (ENSLCRG00005000365) #21	clint1a (ENSLCRG00005000238) #22	LSM11 (ENSLCRG00005000218) #23	thg1l (ENSLCRG00005000206) #24	ADAM19 (ENSLCRG00005000157) #26	GPR151 (ENSLCRG00005000120)	ENSLCRG00005000089	rpl26 (ENSLCRG00005000065)	atp6v0e1 (ENSLCRG00005000057)	BNIP1 (ENSLCRG00005000061)	nkx2.5 (ENSLCRG00005021437)	STC2 (ENSLCRG00005021436)	cpeb4a (ENSLCRG00005021432)	msx2a (ENSLCRG00005021428)	DRD1 (ENSLCRG00005021427)	nek12 (ENSLCRG00005021425)	pin4 (ENSLCRG00005021423)
Tetraodontidae	ANCESTRAL SPECIES	9	ENSGT00940000154444.B #32	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT01030000235081.a	ENSGT00940000157840.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157197
Fugu	MODERN SPECIES	5	itk (ENSTRUG00000004405) #30	ENSTRUG00000005389	ENSTRUG00000005452	gria1a (ENSTRUG00000005608)	ENSTRUG00000025786	wnt8 (ENSTRUG00000006709)	ENSTRUG00000021681	foxi3b (ENSTRUG00000026942)	ENSTRUG00000007147	afap1l1a (ENSTRUG00000007424)	ablim3 (ENSTRUG00000008090)	SH3TC2 (ENSTRUG00000008708)	adrb2a (ENSTRUG00000009069)	IL-12 p40 (ENSTRUG00000009097) #18	EBF1 (ENSTRUG00000009320) #21	clint1a (ENSTRUG00000009500) #22	LSM11 (ENSTRUG00000009729) #23	thg1l (ENSTRUG00000009758) #24	ADAM19 (ENSTRUG00000009860) #26	GPR151 (ENSTRUG00000010343)	PPP2R2B (ENSTRUG00000010364)	rpl26l1 (ENSTRUG00000032099)	atp6v0e1 (ENSTRUG00000010738)	BNIP1 (ENSTRUG00000020057)	nkx2.5 (ENSTRUG00000010802)	stc2 (ENSTRUG00000032377)	cpeb4a (ENSTRUG00000010947)	DRD1 (ENSTRUG00000021188)	nek12 (ENSTRUG00000011168)	pin4 (ENSTRUG00000011179)	faf2 (ENSTRUG00000011219)
Tetraodon	MODERN SPECIES		ENSTNIG00000004978	ENSTNIG00000004977	cyfip2 (ENSTNIG00000003229) #29	itk (ENSTNIG00000003228) #30	med7 (ENSTNIG00000019596) #32	ENSTNIG00000017055	gria1a (ENSTNIG00000017056)	WNT8A (ENSTNIG00000017057)	foxi3b (ENSTNIG00000017058)	afap1l1a (ENSTNIG00000017059)	ablim3 (ENSTNIG00000017060)	SH3TC2 (ENSTNIG00000017061)	adrb2a (ENSTNIG00000017062)	il12ba (ENSTNIG00000001796) #18	EBF1 (ENSTNIG00000017063) #21	clint1a (ENSTNIG00000017065) #22	LSM11 (ENSTNIG00000017066) #23	thg1l (ENSTNIG00000017067) #24	ADAM19 (ENSTNIG00000017068) #26	GPR151 (ENSTNIG00000017069)	PPP2R2B (ENSTNIG00000017070)	rpl26 (ENSTNIG00000017071)	atp6v0e1 (ENSTNIG00000017072)	BNIP1 (ENSTNIG00000017073)	nkx2.5 (ENSTNIG00000017075)	STC2 (ENSTNIG00000017076)	ENSTNIG00000017077	pin4 (ENSTNIG00000005615)	faf2 (ENSTNIG00000005614)	rnf44 (ENSTNIG00000005613)	ENSTNIG00000005612
Percomorphaceae_D	ANCESTRAL SPECIES	17	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Anabantaria	ANCESTRAL SPECIES	15	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Anabantoidei	ANCESTRAL SPECIES	11	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000159824	ENSGT00940000155857.f.a	ENSGT00940000165959
Climbing perch	MODERN SPECIES	1	ENSATEG00000000803	gria1a (ENSATEG00000000871)	ENSATEG00000000936	ENSATEG00000000969	ENSATEG00000000946	ENSATEG00000025662	ENSATEG00000001060	foxi3b (ENSATEG00000026556)	ENSATEG00000001099	afap1l1a (ENSATEG00000001108)	ablim3 (ENSATEG00000001150)	SH3TC2 (ENSATEG00000001211)	adrb2a (ENSATEG00000001246)	il12ba (ENSATEG00000001253) #18	EBF1 (ENSATEG00000001287) #21	clint1a (ENSATEG00000001365) #22	LSM11 (ENSATEG00000001413) #23	ENSATEG00000001426 #24	ENSATEG00000001474 #26	ENSATEG00000001487	ENSATEG00000001492	rpl26 (ENSATEG00000001516)	atp6v0e1 (ENSATEG00000026190)	BNIP1 (ENSATEG00000001656)	NKX2-5 (ENSATEG00000001752)	ENSATEG00000001757	cpeb4a (ENSATEG00000001785)	ENSATEG00000026251	ENSATEG00000001870	ENSATEG00000001882	ENSATEG00000001902
Siamese fighting fish	MODERN SPECIES	1	ENSBSLG00000022144	ENSBSLG00000022149	gria1a (ENSBSLG00000022444)	ENSBSLG00000023157	WNT8A (ENSBSLG00000023159)	ENSBSLG00000023175	ENSBSLG00000023224	foxi3b (ENSBSLG00000023228)	ENSBSLG00000023233	afap1l1a (ENSBSLG00000023244)	ablim3 (ENSBSLG00000023320)	SH3TC2 (ENSBSLG00000024125)	adrb2a (ENSBSLG00000024137)	il12ba (ENSBSLG00000024142) #18	EBF1 (ENSBSLG00000024182) #21	clint1a (ENSBSLG00000024298) #22	LSM11 (ENSBSLG00000024301) #23	thg1l (ENSBSLG00000024304) #24	ENSBSLG00000024320 #26	GPR151 (ENSBSLG00000024352)	PPP2R2B (ENSBSLG00000024353)	rpl26 (ENSBSLG00000024385)	atp6v0e1 (ENSBSLG00000024387)	BNIP1 (ENSBSLG00000024390)	nkx2.5 (ENSBSLG00000024391)	STC2 (ENSBSLG00000024394)	cpeb4a (ENSBSLG00000024396)	msx2a (ENSBSLG00000024502)	ENSBSLG00000024507	nek12 (ENSBSLG00000024521)	pin4 (ENSBSLG00000024596)
Zig-zag eel	MODERN SPECIES	1	itk (ENSMAMG00000012832) #30	ENSMAMG00000012827	ENSMAMG00000012811	gria1a (ENSMAMG00000012778)	ENSMAMG00000012767	ENSMAMG00000012707	ENSMAMG00000012699	foxi3b (ENSMAMG00000012681)	ENSMAMG00000012661	afap1l1a (ENSMAMG00000012645)	ablim3 (ENSMAMG00000012572)	SH3TC2 (ENSMAMG00000012479)	adrb2a (ENSMAMG00000012468)	il12ba (ENSMAMG00000012459) #18	EBF1 (ENSMAMG00000012394) #21	clint1a (ENSMAMG00000012330) #22	LSM11 (ENSMAMG00000012318) #23	ENSMAMG00000012302 #24	ENSMAMG00000012283 #26	ENSMAMG00000012275	ENSMAMG00000012253	rpl26 (ENSMAMG00000012244)	atp6v0e1 (ENSMAMG00000012234)	BNIP1 (ENSMAMG00000012221)	NKX2-5 (ENSMAMG00000012211)	ENSMAMG00000012202	cpeb4a (ENSMAMG00000012163)	ENSMAMG00000012142	ENSMAMG00000012136	ENSMAMG00000026007	ENSMAMG00000012108
Carangaria	ANCESTRAL SPECIES	15	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Pleuronectoidei	ANCESTRAL SPECIES	18	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00510000047029	ENSGT00940000157197
Tongue sole	MODERN SPECIES	6	ENSCSEG00000020111	gria1a (ENSCSEG00000020093)	ENSCSEG00000020084	WNT8A (ENSCSEG00000020067)	ENSCSEG00000020054	ENSCSEG00000020052	foxi3b (ENSCSEG00000020048)	ENSCSEG00000020044	afap1l1a (ENSCSEG00000020028)	ablim3 (ENSCSEG00000020013)	SH3TC2 (ENSCSEG00000020000)	adrb2a (ENSCSEG00000019998)	ENSCSEG00000019988	il12ba (ENSCSEG00000019971) #18	EBF1 (ENSCSEG00000019968) #21	clint1a (ENSCSEG00000019955) #22	LSM11 (ENSCSEG00000019951) #23	thg1l (ENSCSEG00000019947) #24	ENSCSEG00000019944	ENSCSEG00000019942	ADAM19 (ENSCSEG00000019932) #26	ENSCSEG00000019928	rpl26 (ENSCSEG00000019926)	atp6v0e1 (ENSCSEG00000019925)	BNIP1 (ENSCSEG00000019916)	ENSCSEG00000019911	STAG2 (ENSCSEG00000019895)	xiap (ENSCSEG00000019890)	ENSCSEG00000018878	psmd10 (ENSCSEG00000018758)	nxt2 (ENSCSEG00000018710)
Turbot	MODERN SPECIES	4	ENSSMAG00000009664	ENSSMAG00000009636	gria1a (ENSSMAG00000009591)	ENSSMAG00000009574	ENSSMAG00000009563	ENSSMAG00000009532	ENSSMAG00000009518	foxi3b (ENSSMAG00000009513)	ENSSMAG00000009475	afap1l1a (ENSSMAG00000009343)	ablim3 (ENSSMAG00000009267)	SH3TC2 (ENSSMAG00000009150)	adrb2a (ENSSMAG00000009143)	il12ba (ENSSMAG00000009129) #18	EBF1 (ENSSMAG00000009083) #21	clint1a (ENSSMAG00000009019) #22	LSM11 (ENSSMAG00000008998) #23	ENSSMAG00000008988 #24	ENSSMAG00000008967 #26	ENSSMAG00000008960	ENSSMAG00000008920	rpl26 (ENSSMAG00000008898)	atp6v0e1 (ENSSMAG00000023882)	BNIP1 (ENSSMAG00000008871)	nkx2.5 (ENSSMAG00000034948)	ENSSMAG00000008853	cpeb4a (ENSSMAG00000008812)	msx2a (ENSSMAG00000008799)	ENSSMAG00000008788	ENSSMAG00000008767	faf2 (ENSSMAG00000008747)
Carangaria_A	ANCESTRAL SPECIES	22	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Seriola	ANCESTRAL SPECIES	22	ENSGT00940000165241	ENSGT00440000033329.a.a.a	ENSGT00940000157342.c.a	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000176934	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00510000047029
Yellowtail amberjack	MODERN SPECIES	2988	ENSSLDG00000002310	ENSSLDG00000002325	gria1a (ENSSLDG00000002377)	ENSSLDG00000002443	WNT8A (ENSSLDG00000002476)	WNT8A (ENSSLDG00000002575)	ENSSLDG00000002612	foxi3b (ENSSLDG00000002640)	ENSSLDG00000002654	afap1l1a (ENSSLDG00000002678)	ablim3 (ENSSLDG00000002750)	SH3TC2 (ENSSLDG00000002927)	adrb2a (ENSSLDG00000003082)	il12ba (ENSSLDG00000003125) #18	EBF1 (ENSSLDG00000003179) #21	clint1a (ENSSLDG00000003286) #22	LSM11 (ENSSLDG00000003399) #23	thg1l (ENSSLDG00000003416) #24	ENSSLDG00000003450 #26	GPR151 (ENSSLDG00000003464)	ENSSLDG00000003475	rpl26 (ENSSLDG00000003512)	atp6v0e1 (ENSSLDG00000003531)	BNIP1 (ENSSLDG00000003548)	nkx2.5 (ENSSLDG00000003605)	STC2 (ENSSLDG00000003626)	cpeb4a (ENSSLDG00000003652)	msx2a (ENSSLDG00000003697)	DRD1 (ENSSLDG00000003712)	nek12 (ENSSLDG00000003738)	pin4 (ENSSLDG00000003765)
Greater amberjack	MODERN SPECIES	67	ENSSDUG00000010588	ENSSDUG00000010533	gria1a (ENSSDUG00000010457)	ENSSDUG00000010445	WNT8A (ENSSDUG00000010424)	WNT8A (ENSSDUG00000010385)	ENSSDUG00000010376	foxi3b (ENSSDUG00000010362)	ENSSDUG00000010352	afap1l1a (ENSSDUG00000010313)	ablim3 (ENSSDUG00000010236)	SH3TC2 (ENSSDUG00000010200)	adrb2a (ENSSDUG00000010174)	il12ba (ENSSDUG00000010051) #18	EBF1 (ENSSDUG00000009954) #21	clint1a (ENSSDUG00000009895) #22	LSM11 (ENSSDUG00000009878) #23	thg1l (ENSSDUG00000009841) #24	ADAM19 (ENSSDUG00000009819) #26	GPR151 (ENSSDUG00000009811)	ENSSDUG00000009786	rpl26 (ENSSDUG00000009759)	atp6v0e1 (ENSSDUG00000009742)	BNIP1 (ENSSDUG00000009715)	nkx2.5 (ENSSDUG00000009686)	STC2 (ENSSDUG00000009667)	cpeb4a (ENSSDUG00000009599)	msx2a (ENSSDUG00000009581)	DRD1 (ENSSDUG00000009570)	pin4 (ENSSDUG00000009558)	nek12 (ENSSDUG00000009544)
Barramundi perch	MODERN SPECIES	63	itk (ENSLCAG00010005734) #30	ENSLCAG00010005751	gria1a (ENSLCAG00010005799)	ENSLCAG00010005991	WNT8A (ENSLCAG00010005995)	ENSLCAG00010006004	ENSLCAG00010006007	foxi3b (ENSLCAG00010006012)	ENSLCAG00010006021	afap1l1a (ENSLCAG00010006031)	ablim3 (ENSLCAG00010006048)	SH3TC2 (ENSLCAG00010006084)	adrb2a (ENSLCAG00010006103)	EBF1 (ENSLCAG00010006361) #21	il12ba (ENSLCAG00010007108) #18	clint1a (ENSLCAG00010007115) #22	LSM11 (ENSLCAG00010007119) #23	thg1l (ENSLCAG00010007125) #24	ADAM19 (ENSLCAG00010007141) #26	GPR151 (ENSLCAG00010007185)	ENSLCAG00010007273	rpl26 (ENSLCAG00010007402)	atp6v0e1 (ENSLCAG00010007410)	BNIP1 (ENSLCAG00010007416)	nkx2.5 (ENSLCAG00010007425)	STC2 (ENSLCAG00010007434)	cpeb4a (ENSLCAG00010007459)	msx2a (ENSLCAG00010007508)	DRD1 (ENSLCAG00010007511)	nek12 (ENSLCAG00010007515)	pin4 (ENSLCAG00010007520)
Pinecone sodierfish	MODERN SPECIES	1	ENSMMDG00005022550	ENSMMDG00005022552	gria1a (ENSMMDG00005022559)	ENSMMDG00005022606	WNT8A (ENSMMDG00005022609)	ENSMMDG00005022610	zgc:194246 (ENSMMDG00005022613)	foxi3b (ENSMMDG00005022614)	ENSMMDG00005022617	afap1l1a (ENSMMDG00005022619)	ablim3 (ENSMMDG00005022624)	SH3TC2 (ENSMMDG00005022645)	adrb2a (ENSMMDG00005022646)	il12ba (ENSMMDG00005022654) #18	EBF1 (ENSMMDG00005022694) #21	clint1a (ENSMMDG00005022699) #22	LSM11 (ENSMMDG00005022701) #23	thg1l (ENSMMDG00005022703) #24	thg1l (ENSMMDG00005022704) #24	ADAM19 (ENSMMDG00005022706) #26	GPR151 (ENSMMDG00005022716)	ENSMMDG00005022719	rpl26 (ENSMMDG00005022729)	atp6v0e1 (ENSMMDG00005022732)	BNIP1 (ENSMMDG00005022734)	nkx2.5 (ENSMMDG00005022739)	STC2 (ENSMMDG00005022744)	cpeb4a (ENSMMDG00005022749)	msx2a (ENSMMDG00005022766)	DRD1 (ENSMMDG00005022768)	nek12 (ENSMMDG00005022771)
Cod	MODERN SPECIES	1	ENSGMOG00000023039	gria1a (ENSGMOG00000014490)	ENSGMOG00000001977	ENSGMOG00000001956	ENSGMOG00000001947	zgc:194246 (ENSGMOG00000024122)	foxi3b (ENSGMOG00000023911)	ENSGMOG00000001922	afap1l1a (ENSGMOG00000001890)	ablim3 (ENSGMOG00000001852)	SH3TC2 (ENSGMOG00000001820)	adrb2a (ENSGMOG00000001811)	ENSGMOG00000032788	ENSGMOG00000015572 #18	ebf3a (ENSGMOG00000015541) #21	clint1a (ENSGMOG00000036912) #22	LSM11 (ENSGMOG00000015497) #23	ENSGMOG00000015482 #24	ENSGMOG00000015440 #26	ENSGMOG00000015432	ENSGMOG00000018383	rpl26 (ENSGMOG00000015401)	atp6v0e1 (ENSGMOG00000029150)	BNIP1 (ENSGMOG00000036420)	NKX2-5 (ENSGMOG00000015370)	ENSGMOG00000015364	cpeb4a (ENSGMOG00000023337)	ENSGMOG00000027663	ENSGMOG00000015277	ENSGMOG00000031231	ENSGMOG00000036954
Protacanthopterygii	ANCESTRAL SPECIES	19	ENSGT00940000158334	ENSGT00940000156901.A.d	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000007501	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.b.d #22	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959	ENSGT00940000163842
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	143					ENSGT00940000159538.g.a.e	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.a.f #22	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b	ENSGT00950000182859.A.a.b.b.d.c.a.a.a #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000012944.j #23	ENSGT00390000011705.v.b #24	ENSGT00390000011705.u #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a	ENSGT00940000154998.a.b.a.a	ENSGT00940000164716.A.c	ENSGT00940000155857.f.a.a	ENSGT00510000047029
Salmoninae_a	ANCESTRAL SPECIES	41	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.a.f #22	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b	ENSGT00950000182859.A.a.b.b.d.c.a.a.a #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000012944.j #23	ENSGT00390000011705.v.b #24	ENSGT00390000011705.u #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165.j	ENSGT00940000156866.a.b	ENSGT00390000014412.l.d	ENSGT00940000158996.m.b	ENSGT00390000005989.a.b.a.a.b	ENSGT00940000154998.a.b.a.b	ENSGT00940000164716.A.d	ENSGT00940000155857.f.a.b	ENSGT00940000165959
Salmo	ANCESTRAL SPECIES	47	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d	ENSGT00940000168499.a	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00390000007501.f	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b	ENSGT00950000182859.A.a.b.b.d.c.a.a.a #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000012944.j #23	ENSGT00390000011705.u #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165.j	ENSGT00940000156866.a.b	ENSGT00390000014412.l.d	ENSGT00940000158996.m.b	ENSGT00390000005989.a.b.a.a.b	ENSGT00940000154998.a.b.a.b	ENSGT00940000164716.A.d	ENSGT00940000155857.f.a.b	ENSGT00940000165959.c	ENSGT00940000163842
Atlantic salmon	MODERN SPECIES	28	ENSSSAG00000106022	ENSSSAG00000085319	ENSSSAG00000040143	foxi3b (ENSSSAG00000040153)	ENSSSAG00000068610	ENSSSAG00000040168	ENSSSAG00000087064	afap1l1a (ENSSSAG00000040443)	ENSSSAG00000040583	SH3TC2 (ENSSSAG00000041691)	ENSSSAG00000041803	ENSSSAG00000098102	il12ba (ENSSSAG00000041830) #18	ENSSSAG00000041836	EBF1 (ENSSSAG00000041858) #21	ENSSSAG00000044622 #22	LSM11 (ENSSSAG00000044648) #23	ENSSSAG00000044706 #24	ENSSSAG00000087715 #26	ENSSSAG00000044973	ENSSSAG00000104483	rpl26 (ENSSSAG00000045463)	atp6v0e1 (ENSSSAG00000045502)	ENSSSAG00000100909	BNIP1 (ENSSSAG00000084179)	nkx2.5 (ENSSSAG00000045527)	ENSSSAG00000093108	cpeb4a (ENSSSAG00000045556)	msx2 (ENSSSAG00000045720)	ENSSSAG00000045727	ENSSSAG00000045734
River trout	MODERN SPECIES	525																clint1a (ENSSTUG00000046422) #22	thg1l (ENSSTUG00000046405) #24
Oncorhynchus	ANCESTRAL SPECIES	34	ENSGT00940000153768.b.t.a.b.a.a.b	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h.b	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b.i	ENSGT00950000182859.A.a.b.b.d.c.a.b.b #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000011705.v.a #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165.j	ENSGT00940000156866.a.b	ENSGT00390000014412.l.d	ENSGT00940000158996.m.b	ENSGT00390000005989.a.b.a.a.b	ENSGT00940000154998.a.b.a.b	ENSGT00940000164716.A.d	ENSGT00940000155857.f.a.b	ENSGT00940000165959	ENSGT00940000156381.ab	ENSGT00390000010669
Oncorhynchus_a	ANCESTRAL SPECIES	34	ENSGT00940000153768.b.t.a.b.a.a.b	ENSGT00940000165206.d.b	ENSGT00940000158334.g.a	ENSGT00940000156901.A.d.d	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h.b	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b.i	ENSGT00950000182859.A.a.b.b.d.c.a.b.b #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000011705.v.a #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00390000014165.j	ENSGT00940000156866.a.b	ENSGT00390000014412.l.d	ENSGT00940000158996.m.b	ENSGT00390000005989.a.b.a.a.b	ENSGT00940000154998.a.b.a.b	ENSGT00940000164716.A.d	ENSGT00940000155857.f.a.b	ENSGT00940000165959	ENSGT00940000156381.ab	ENSGT00390000010669	ENSGT00940000166874.k
Coho salmon	MODERN SPECIES	6	ENSOKIG00005027147	RMND5B (ENSOKIG00005026915)	ENSOKIG00005026900	foxi3b (ENSOKIG00005026891)	ENSOKIG00005026883	ENSOKIG00005026877	ABLIM3 (ENSOKIG00005026342)	SH3TC2 (ENSOKIG00005026136)	adrb2a (ENSOKIG00005026111)	il12ba (ENSOKIG00005026108) #18	ENSOKIG00005026091	ENSOKIG00005026069	ENSOKIG00005026058 #21	ENSOKIG00005026048	ENSOKIG00005026042 #21	ENSOKIG00005026030 #22	thg1l (ENSOKIG00005026021) #24	ENSOKIG00005025343 #26	GPR151 (ENSOKIG00005025245)	rpl26 (ENSOKIG00005025221)	atp6v0e1 (ENSOKIG00005025201)	BNIP1 (ENSOKIG00005025175)	nkx2.5 (ENSOKIG00005025165)	STC2 (ENSOKIG00005041766)	ENSOKIG00005041750	cpeb4a (ENSOKIG00005041606)	msx2a (ENSOKIG00005041567)	DRD1 (ENSOKIG00005041522)	nek12 (ENSOKIG00005041508)	nxt2 (ENSOKIG00005041480)	ENSOKIG00005041469
Rainbow trout	MODERN SPECIES	23	ENSOMYG00000075117	afap1l1a (ENSOMYG00000019614)	ENSOMYG00000072163	SH3TC2 (ENSOMYG00000071494)	ENSOMYG00000052680	ENSOMYG00000058892	ENSOMYG00000072099	ENSOMYG00000071779	ENSOMYG00000072216	il12ba (ENSOMYG00000019564) #18	ENSOMYG00000019558	ENSOMYG00000072987	EBF1 (ENSOMYG00000060398) #21	ENSOMYG00000063906	ENSOMYG00000056049	ENSOMYG00000064299 #22	LSM11 (ENSOMYG00000019530) #23	ENSOMYG00000019519 #24	ENSOMYG00000066045	ENSOMYG00000019494 #26	ENSOMYG00000019485	ENSOMYG00000074061	ENSOMYG00000025217	rpl26 (ENSOMYG00000043506)	atp6v0e1 (ENSOMYG00000061869)	BNIP1 (ENSOMYG00000043498)	nkx2.5 (ENSOMYG00000043495)	STC2 (ENSOMYG00000067176)	ENSOMYG00000060076	cpeb4a (ENSOMYG00000075511)	msx2a (ENSOMYG00000077193)
Huchen	MODERN SPECIES	2145												adrb2a (ENSHHUG00000004926)	ENSHHUG00000004931 #18	ENSHHUG00000004989	ENSHHUG00000005004 #21	clint1a (ENSHHUG00000005053) #22	thg1l (ENSHHUG00000005111) #24	ENSHHUG00000005141
Salmoninae	ANCESTRAL SPECIES	143									ENSGT00940000159538.g.a.e	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.a.f #22	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b	ENSGT00950000182859.A.a.b.b.d.c.a.a.a #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000012944.j #23	ENSGT00390000011705.v.b #24	ENSGT00390000011705.u #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a
Salmoninae_a	ANCESTRAL SPECIES	41	ENSGT00940000168499.a	ENSGT00940000153203.A.a.c.a.a	ENSGT00940000158603.c	ENSGT00940000164576.b.a.a.e	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d.d	ENSGT00950000182850.a.b.a.b.a.b.h	ENSGT00530000063812.B.c.a	ENSGT00940000159538.g.a.e	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.a.f #22	ENSGT00390000012630.A.b.c #18	ENSGT00940000154967.a.a.b	ENSGT00950000182859.A.a.b.b.d.c.a.a.a #21	ENSGT00940000155650.a.a.e #22	ENSGT00390000012944.j #23	ENSGT00390000011705.v.b #24	ENSGT00390000011705.u #24	ENSGT00940000159624.g #26	ENSGT01030000234518.A.a.b.h	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165.j	ENSGT00940000156866.a.b	ENSGT00390000014412.l.d	ENSGT00940000158996.m.b	ENSGT00390000005989.a.b.a.a.b
Oncorhynchus	ANCESTRAL SPECIES	45	ENSGT00940000165340.k.b	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c	ENSGT00940000168499.b	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00950000182850.a.b.a.b.a.b.h.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.a.f #22	ENSGT00390000012944.i #23	ENSGT00940000159624.h.b #26	ENSGT01030000234518.A.a.b.g	ENSGT00950000182864.a.b.b.a.b.a.b.b.b	ENSGT00390000014165.i	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a	ENSGT00940000154998.a.b.a.a	ENSGT00940000164716.A.c	ENSGT00940000155857.f.a.a	ENSGT00510000047029	ENSGT00940000157427.j	ENSGT00940000156381.`b
Rainbow trout	MODERN SPECIES	5	ENSOMYG00000011955	ENSOMYG00000012093	ENSOMYG00000060465	ENSOMYG00000012121	ENSOMYG00000048509	ENSOMYG00000069189	ENSOMYG00000012242	afap1l1a (ENSOMYG00000012254)	ENSOMYG00000053543	SH3TC2 (ENSOMYG00000019579)	ENSOMYG00000071793	ENSOMYG00000050866	ENSOMYG00000076178	ENSOMYG00000015114 #18	EBF1 (ENSOMYG00000015081) #21	ENSOMYG00000066391 #22	LSM11 (ENSOMYG00000015096) #23	ENSOMYG00000067774 #24	ENSOMYG00000061851	ENSOMYG00000047910 #26	ENSOMYG00000064582	ENSOMYG00000019500	ENSOMYG00000053239	rpl26 (ENSOMYG00000012270)	VA0H (ENSOMYG00000054088)	BNIP1 (ENSOMYG00000012295)	nkx2.5 (ENSOMYG00000012307)	STC2 (ENSOMYG00000043490)	cpeb4a (ENSOMYG00000014504)	ENSOMYG00000049259	msx2a (ENSOMYG00000015061)
Oncorhynchus_a	ANCESTRAL SPECIES	46	ENSGT00940000157840.a	ENSGT00940000167593	ENSGT00940000157342.c.a.c.b.b	ENSGT00440000033329.a.a.a.i	ENSGT00940000165241.c	ENSGT00940000154444.B #32	ENSGT00940000158850.p #30	ENSGT00500000044831.a.a.a.a.b.b ##29	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00940000155650.a.a.f #22	ENSGT00390000012944.i #23	ENSGT00940000159624.h.b #26	ENSGT01030000234518.A.a.b.g	ENSGT00950000182864.a.b.b.a.b.a.b.b.a.b	ENSGT00390000014165.i	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a	ENSGT00940000154998.a.b.a.a	ENSGT00940000164716.A.c	ENSGT00940000155857.f.a.a	ENSGT00510000047029	ENSGT00940000157427.j	ENSGT00940000156381.`b
Coho salmon	MODERN SPECIES	10	ENSOKIG00005038796	hnrnph1 (ENSOKIG00005039171)	RUFY1 (ENSOKIG00005039317)	hbegfa (ENSOKIG00005040047)	rmnd5b (ENSOKIG00005040087)	ENSOKIG00005040327	ENSOKIG00005040357	afap1l1a (ENSOKIG00005040370)	ENSOKIG00005040391	SH3TC2 (ENSOKIG00005040449)	ENSOKIG00005040534	ADRB2 (ENSOKIG00005040557)	ENSOKIG00005040566	ENSOKIG00005040602 #18	EBF1 (ENSOKIG00005040636) #21	CLINT1 (ENSOKIG00005040748) #22	LSM11 (ENSOKIG00005041226) #23	ENSOKIG00005041247	ENSOKIG00005041385 #26	GPR151 (ENSOKIG00005041698)	ENSOKIG00005041714	ENSOKIG00005041725	rpl26 (ENSOKIG00005041732)	atp6v0e1 (ENSOKIG00005041743)	BNIP1 (ENSOKIG00005041757)	nkx2.5 (ENSOKIG00005041764)	STC2 (ENSOKIG00005041772)	cpeb4a (ENSOKIG00005041790)	msx2a (ENSOKIG00005041806)	DRD1 (ENSOKIG00005041812)	pin4 (ENSOKIG00005041819)
Salmo	ANCESTRAL SPECIES	24	ENSGT00940000165206.d.a	ENSGT00940000158334.g.b	ENSGT00940000156901.A.d.c	ENSGT00940000168499.b	ENSGT00940000153203.A.a.c.a.b	ENSGT00940000158603.d	ENSGT01030000235237.d	ENSGT00940000164576.b.a.a.f	ENSGT00950000183067.a.b.a.d.c	ENSGT00950000182850.a.b.a.b.a.b.g.a	ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501.e	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.a.f #22	ENSGT00390000012944.i #23	ENSGT00390000011705.v.a #24	ENSGT00940000159624.h #26	ENSGT01030000234518.A.a.b.g	ENSGT00950000182864.a.b.b.a.b.a.b.b.b	ENSGT00390000014165.i	ENSGT00940000156866.a.a	ENSGT00390000014412.l.c	ENSGT00940000158996.m.a	ENSGT00390000005989.a.b.a.a.a	ENSGT00940000154998.a.b.a.a	ENSGT00940000164716.A.c	ENSGT00940000155857.f.a.a	ENSGT00940000165959.d	ENSGT00510000047029
River trout	MODERN SPECIES	22	hbegfa (ENSSTUG00000001485)	ENSSTUG00000001479	rmnd5b (ENSSTUG00000001443)	ENSSTUG00000001432	foxi3b (ENSSTUG00000001426)	afap1l1a (ENSSTUG00000001384)	ABLIM3 (ENSSTUG00000001359)	SH3TC2 (ENSSTUG00000001286)	ENSSTUG00000001266	adrb2a (ENSSTUG00000001260)	EFCAB9 (ENSSTUG00000001251)	il12ba (ENSSTUG00000001143) #18	ENSSTUG00000001134	EBF1 (ENSSTUG00000001083) #21	ENSSTUG00000001066	clint1a (ENSSTUG00000001024) #22	LSM11 (ENSSTUG00000001012) #23	thg1l (ENSSTUG00000000985) #24	ENSSTUG00000000666 #26	GPR151 (ENSSTUG00000000621)	ENSSTUG00000000598	rpl26 (ENSSTUG00000000591)	atp6v0e1 (ENSSTUG00000000589)	BNIP1 (ENSSTUG00000000585)	nkx2.5 (ENSSTUG00000000583)	STC2 (ENSSTUG00000000580)	cpeb4a (ENSSTUG00000000569)	msx2a (ENSSTUG00000000563)	pin4 (ENSSTUG00000000539)	acsl4a (ENSSTUG00000000500)	nxt2 (ENSSTUG00000000470)
Atlantic salmon	MODERN SPECIES	24	hbegfa (ENSSSAG00000041283)	ENSSSAG00000091861	ENSSSAG00000081971	ENSSSAG00000039848	ENSSSAG00000121770	ENSSSAG00000095964	zgc:194246 (ENSSSAG00000002338)	ENSSSAG00000106889	afap1l1a (ENSSSAG00000068597)	ENSSSAG00000068581	SH3TC2 (ENSSSAG00000044258)	ENSSSAG00000119290	efcab9 (ENSSSAG00000068958)	ENSSSAG00000068948 #18	EBF1 (ENSSSAG00000115078) #21	ENSSSAG00000068917 #22	lsm11 (ENSSSAG00000068908) #23	ENSSSAG00000068905 #24	ENSSSAG00000044766 #26	ENSSSAG00000112575	ENSSSAG00000070677	ENSSSAG00000099093	ENSSSAG00000119445	rl26 (ENSSSAG00000076707)	ENSSSAG00000076705	nkx2.5 (ENSSSAG00000088975)	ENSSSAG00000114367	cpeb4a (ENSSSAG00000076649)	msx2a (ENSSSAG00000118332)	ENSSSAG00000076628	ENSSSAG00000088550
Huchen	MODERN SPECIES	6208																clint1a (ENSHHUG00000018960) #22	ENSHHUG00000019021 #23	thg1l (ENSHHUG00000019025) #24
Northern pike	MODERN SPECIES	3	hbegfa (ENSELUG00000006753)	rmnd5b (ENSELUG00000006778)	ENSELUG00000006800	zgc:194246 (ENSELUG00000000219)	foxi3b (ENSELUG00000006819)	ENSELUG00000006843	afap1l1a (ENSELUG00000006908)	ABLIM3 (ENSELUG00000006966)	SH3TC2 (ENSELUG00000007026)	adrb2a (ENSELUG00000007046)	ENSELUG00000033617	ENSELUG00000007054	il12ba (ENSELUG00000007092) #18	ENSELUG00000026279	EBF1 (ENSELUG00000007199) #21	clint1a (ENSELUG00000001078) #22	LSM11 (ENSELUG00000007280) #23	zdhhc24 (ENSELUG00000007297)	rnaseh2c (ENSELUG00000007345)	ZBTB3 (ENSELUG00000007359)	trpt1 (ENSELUG00000007385)	fermt3b (ENSELUG00000007439)	FLRT1 (ENSELUG00000007458)	macrod1 (ENSELUG00000007504)	ccdc88b (ENSELUG00000007573)	rom1b (ENSELUG00000007608)	SCYL1 (ENSELUG00000007658)	ENSELUG00000007734	INTS5 (ENSELUG00000007756)	GANAB (ENSELUG00000007856)	ENSELUG00000007921
Otomorpha	ANCESTRAL SPECIES	221	ENSGT00940000167593	ENSGT01060000248750	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26
Otophysi	ANCESTRAL SPECIES	75	ENSGT00940000164655	ENSGT00870000136493.c	ENSGT00940000156285	ENSGT00940000176119	ENSGT00940000156931	ENSGT00950000182950.A	ENSGT00940000153727.a	ENSGT00950000182994.A	ENSGT00390000001134.b.ab	ENSGT00940000159922.a.a	ENSGT00940000153669.b.p	ENSGT00390000012182	ENSGT00940000166658.a	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00500000044890.b	ENSGT00940000153737.a	ENSGT00940000158987	ENSGT00940000165729	ENSGT00390000003231.a	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693 #9	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641.k.b	ENSGT00390000007501	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00940000153737.a	ENSGT00940000158987	ENSGT00940000165729	ENSGT00390000003231.a	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b
Channel catfish	MODERN SPECIES	27	itk (ENSIPUG00000018605) #30	med7 (ENSIPUG00000018597)	LONRF1 (ENSIPUG00000018548)	GRIA1 (ENSIPUG00000018516)	ENSIPUG00000018489	WNT8A (ENSIPUG00000018480)	ENSIPUG00000018474	zgc:194246 (ENSIPUG00000018466)	foxi1e (ENSIPUG00000018458)	ENSIPUG00000018444	afap1l1 (ENSIPUG00000018335)	ablim3 (ENSIPUG00000018280)	SH3TC2 (ENSIPUG00000018204)	ENSIPUG00000018187 #20	ebf1 (ENSIPUG00000018125) #21	CLINT1 (ENSIPUG00000018092) #22	lsm11 (ENSIPUG00000018086) #23	ZBTB3 (ENSIPUG00000018082)	rnaseh2c (ENSIPUG00000018044)	trmt12 (ENSIPUG00000018011)	SYTL4 (ENSIPUG00000017973)	srpx2 (ENSIPUG00000017961)	tspan7 (ENSIPUG00000017920)	ENSIPUG00000017870	cstf2 (ENSIPUG00000017839)	nox1 (ENSIPUG00000017799)	Xk (ENSIPUG00000017780)	arl13a (ENSIPUG00000017720)	tmem35a (ENSIPUG00000017714)	CENPI (ENSIPUG00000017661)	drp2 (ENSIPUG00000017593)
Characiphysae_b	ANCESTRAL SPECIES	146												ENSGT00390000012182	ENSGT00940000166658.a	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00940000153737.a	ENSGT00940000158987	ENSGT00940000165729	ENSGT00390000003231.a	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b
Electric eel	MODERN SPECIES	425														RNF145 (ENSEEEG00000016952) #20	ebf3a (ENSEEEG00000016949) #21	clint1a (ENSEEEG00000016938) #22	LSM11 (ENSEEEG00000016936) #23	ZBTB3 (ENSEEEG00000016935)	rnaseh2c (ENSEEEG00000016934)	trmt12 (ENSEEEG00000016933)	sytl4 (ENSEEEG00000016932)	SRPX2 (ENSEEEG00000016931)	tspan7 (ENSEEEG00000016929)	ENSEEEG00000016923	cstf2 (ENSEEEG00000016914)	nox1 (ENSEEEG00000016911)	xkrx (ENSEEEG00000016906)	arl13a (ENSEEEG00000016905)	tmem35 (ENSEEEG00000016904)	CENPI (ENSEEEG00000016902)	drp2 (ENSEEEG00000016586)
Characoidei	ANCESTRAL SPECIES	2	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693 #9	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000156641.k.b	ENSGT00390000012630.A.b #18	ENSGT00940000166658.a	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000159092	ENSGT00940000153737.a	ENSGT00940000158987	ENSGT00940000165729	ENSGT00390000003231.a	ENSGT00940000161284	ENSGT00940000154325.a	ENSGT00390000013235	ENSGT00940000153467.a.b
Red-bellied piranha	MODERN SPECIES	56	WNT8A (ENSPNAG00000020116)	ENSPNAG00000020109	ENSPNAG00000020065	zgc:194246 (ENSPNAG00000020055)	foxi3b (ENSPNAG00000020052)	ENSPNAG00000020045	pttg1 (ENSPNAG00000020030) #9	afap1l1a (ENSPNAG00000020021)	ablim3 (ENSPNAG00000019976)	SH3TC2 (ENSPNAG00000006468)	adrb2a (ENSPNAG00000019838)	UBTD2 (ENSPNAG00000019833)	il12ba (ENSPNAG00000005879) #18	RNF145 (ENSPNAG00000019400) #20	ebf3a (ENSPNAG00000019350) #21	clint1a (ENSPNAG00000019182) #22	LSM11 (ENSPNAG00000019128) #23	ZBTB3 (ENSPNAG00000019119)	rnaseh2c (ENSPNAG00000019111)	trmt12 (ENSPNAG00000019028)	sytl4 (ENSPNAG00000005144)	SRPX2 (ENSPNAG00000019001)	tspan7 (ENSPNAG00000018991)	ENSPNAG00000018925	cstf2 (ENSPNAG00000018887)	nox1 (ENSPNAG00000018857)	xkrx (ENSPNAG00000018809)	arl13a (ENSPNAG00000018795)	tmem35 (ENSPNAG00000018748)	CENPI (ENSPNAG00000018731)	drp2 (ENSPNAG00000006595)
Mexicana tetra	MODERN SPECIES	16	trim105 (ENSAMXG00000032694)	npy7r (ENSAMXG00000026043)	prelid1a (ENSAMXG00000038989)	ENSAMXG00000035984	pttg1 (ENSAMXG00000007324) #9	afap1l1a (ENSAMXG00000007308)	ablim3 (ENSAMXG00000007158)	SH3TC2 (ENSAMXG00000001194)	ENSAMXG00000026033	adrb2a (ENSAMXG00000026034)	ENSAMXG00000034568	il12ba (ENSAMXG00000001197) #18	ENSAMXG00000040860	RNF145 (ENSAMXG00000038735) #20	ebf3a (ENSAMXG00000001200) #21	clint1a (ENSAMXG00000001202) #22	LSM11 (ENSAMXG00000033820) #23	ENSAMXG00000044033	rnaseh2c (ENSAMXG00000001210)	trmt12 (ENSAMXG00000040366)	sytl4 (ENSAMXG00000001212)	SRPX2 (ENSAMXG00000040946)	tspan7 (ENSAMXG00000043884)	ENSAMXG00000039235	cstf2 (ENSAMXG00000021477)	nox1 (ENSAMXG00000021484)	xkrx (ENSAMXG00000031510)	arl13a (ENSAMXG00000021495)	tmem35 (ENSAMXG00000030227)	CENPI (ENSAMXG00000021502)	ENSAMXG00000036456
Cyprinoidei	ANCESTRAL SPECIES	9	ENSGT00940000167593	ENSGT00940000157840.a	ENSGT00940000157840.b	ENSGT00940000156835.l.a.a	ENSGT00940000179769	ENSGT01030000235237	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00390000009693 #9	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.b.n	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00940000161486	ENSGT00940000166023	ENSGT00940000153304.A	ENSGT00940000159060	ENSGT00940000159149	ENSGT00940000160322	ENSGT00390000006394	ENSGT00940000158645	ENSGT00940000156344.b	ENSGT00940000156950.a	ENSGT00420000029769.b	ENSGT00390000012574	ENSGT00940000156950.b	ENSGT00940000156344.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	43	ENSGT00940000157840.a.b	ENSGT00940000157840.b.b	ENSGT00940000156835.l.a.a.b	ENSGT01030000235237.b	ENSGT00940000164576.b.a.a.h	ENSGT00940000166663.b	ENSGT00390000009693.fb #9	ENSGT00950000183067.a.b.a.d.b	ENSGT00950000182850.a.b.a.b.b.n.a	ENSGT00530000063812.B.h	ENSGT00940000159538.g.a.a	ENSGT00390000007501	ENSGT00390000012630.A.b.b #18	ENSGT00940000157281.r.b.a #20	ENSGT00950000182859.A.a.b.b.d.b.a #21	ENSGT00940000155650.a.a.g #22	ENSGT00390000012944 #23	ENSGT00940000161486.g	ENSGT00940000166023.a	ENSGT00940000153304.A.c	ENSGT00940000159060.b	ENSGT00940000159149.d	ENSGT00940000160322.b	ENSGT00390000006394.b	ENSGT00940000158645.g.b	ENSGT00940000158645.h	ENSGT00940000156344.b.e	ENSGT00940000156950.a.d	ENSGT00420000029769.b.j	ENSGT00390000012574.j.a	ENSGT00940000167634.c
Cyprininae_a	ANCESTRAL SPECIES	97	ENSGT00940000157342.c.a.a	ENSGT00940000167593.e.a	ENSGT00940000157840.a.b	ENSGT00940000157840.b.b	ENSGT00940000156835.l.a.a.b	ENSGT01030000235237.b	ENSGT00940000164576.b.a.a.h	ENSGT00950000183067.a.b.a.d.b	ENSGT00950000182850.a.b.a.b.b.n.a	ENSGT00530000063812.B.h	ENSGT00940000159538.g.a.a	ENSGT00390000007501	ENSGT00390000012630.A.b.b #18	ENSGT00940000157281.r.b.a #20	ENSGT00950000182859.A.a.b.b.d.b.a #21	ENSGT00940000155650.a.a.g #22	ENSGT00390000012944 #23	ENSGT00940000161486.g	ENSGT00940000153304.A.c	ENSGT00940000159060.b	ENSGT00940000159149.d	ENSGT00940000160322.b	ENSGT00940000158645.h	ENSGT00940000156344.b.e	ENSGT00940000156950.a.d	ENSGT00420000029769.b.j	ENSGT00390000012574.j.a	ENSGT00940000167634.c	ENSGT00940000167634.d.b	ENSGT00940000154518.a.e	ENSGT01050000244965.b.a.a
Golden-line barbel	MODERN SPECIES	329	gria1a (ENSSGRG00000021261)	ENSSGRG00000021262	ENSSGRG00000021263	ENSSGRG00000021264	zgc:194246 (ENSSGRG00000021265)	foxi3b (ENSSGRG00000021266)	pttg1 (ENSSGRG00000021268) #9	afap1l1a (ENSSGRG00000021269)	ablim3 (ENSSGRG00000021270)	SH3TC2 (ENSSGRG00000021298)	adrb2a (ENSSGRG00000021299)	EFCAB9 (ENSSGRG00000021300)	ENSSGRG00000021302	il12ba (ENSSGRG00000021303) #18	ebf3a (ENSSGRG00000021317) #21	clint1a (ENSSGRG00000021767) #22	LSM11 (ENSSGRG00000021775) #23	rnaseh2c (ENSSGRG00000021778)	ZBTB3 (ENSSGRG00000021781)	trmt12 (ENSSGRG00000021782)	sytl4 (ENSSGRG00000021785)	SRPX2 (ENSSGRG00000021790)	ENSSGRG00000021872	mrpl18 (ENSSGRG00000021873)	PDGFC (ENSSGRG00000021887)	glrbb (ENSSGRG00000022094)	gria2b (ENSSGRG00000022206)	GASK1B (ENSSGRG00000027064)	tmem144b (ENSSGRG00000027066)	adh5l (ENSSGRG00000027074)	ENSSGRG00000027639
Common carp reference	MODERN SPECIES	35	ENSCCRG00000082902	ENSCCRG00000073085	ENSCCRG00000054631	ENSCCRG00000054166	zgc:194246 (ENSCCRG00000035761)	foxi3b (ENSCCRG00000073939)	afap1l1a (ENSCCRG00000035746)	ENSCCRG00000028249	ablim3 (ENSCCRG00000058203)	SH3TC2 (ENSCCRG00000035858)	adrb2a (ENSCCRG00000035856)	ENSCCRG00000035854	il12ba (ENSCCRG00000032928) #18	RNF145 (ENSCCRG00000032860) #20	ebf3a (ENSCCRG00000060568) #21	clint1a (ENSCCRG00000053927) #22	LSM11 (ENSCCRG00000073242) #23	ENSCCRG00000071752	trmt12 (ENSCCRG00000060895)	sytl4 (ENSCCRG00000050668)	ENSCCRG00000081130	ENSCCRG00000012911	PDGFC (ENSCCRG00000018720)	glrbb (ENSCCRG00000016043)	gria2b (ENSCCRG00000067734)	GASK1B (ENSCCRG00000074349)	tmem144b (ENSCCRG00000029120)	adh5l (ENSCCRG00000077152)	zgc:77938 (ENSCCRG00000062627)	pitx2 (ENSCCRG00000043209)	elovl6 (ENSCCRG00000075942)
Goldfish	MODERN SPECIES	5	WNT8A (ENSCARG00000058750)	ENSCARG00000058705	ENSCARG00000058688	zgc:194246 (ENSCARG00000058675)	foxi3b (ENSCARG00000058659)	ENSCARG00000058596	pttg1 (ENSCARG00000058576) #9	afap1l1a (ENSCARG00000058547)	ablim3 (ENSCARG00000057890)	SH3TC2 (ENSCARG00000057731)	adrb2a (ENSCARG00000057714)	EFCAB9 (ENSCARG00000057711)	il12ba (ENSCARG00000057679) #18	RNF145 (ENSCARG00000057629) #20	ebf3a (ENSCARG00000055166) #21	clint1a (ENSCARG00000054975) #22	LSM11 (ENSCARG00000054958) #23	ZBTB3 (ENSCARG00000054952)	rnaseh2c (ENSCARG00000054918)	trmt12 (ENSCARG00000054889)	SRPX2 (ENSCARG00000054859)	sytl4 (ENSCARG00000054828)	SSH3 (ENSCARG00000054753)	mrpl18 (ENSCARG00000054745)	elovl6 (ENSCARG00000054719)	SYNPO (ENSCARG00000054702)	tspan17 (ENSCARG00000054628)	ENSCARG00000054606	LRRTM2 (ENSCARG00000054595)	ctnna1 (ENSCARG00000053916)	ENSCARG00000053833
Cyprininae	ANCESTRAL SPECIES	394	ENSGT00940000167593.e.b	ENSGT00940000157840.a.a	ENSGT00940000157840.b.a	ENSGT00940000156835.l.a.a.a	ENSGT01030000235237.a	ENSGT00940000164576.b.a.a.g	ENSGT00940000166663.a	ENSGT00390000009693.gb #9	ENSGT00950000183067.a.b.a.d.a	ENSGT00950000182850.a.b.a.b.b.n.b	ENSGT00530000063812.B.g	ENSGT00940000159538.g.a.b	ENSGT00390000012630.A.b.a #18	ENSGT00940000157281.r.b.b #20	ENSGT00950000182859.A.a.b.b.d.b.b #21	ENSGT00940000155650.a.a.h #22	ENSGT00940000161486.h	ENSGT00940000166023.b	ENSGT00940000153304.A.d	ENSGT00940000159060.a	ENSGT00940000159149.c	ENSGT00940000160322.a	ENSGT00390000006394.a	ENSGT00940000158645.g.a	ENSGT00940000156344.b.f	ENSGT00940000156950.a.c	ENSGT00420000029769.b.i	ENSGT00390000012574.j.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	32	ints6l (ENSCARG00000014377)	mmgt1 (ENSCARG00000014623)	slc9a6a (ENSCARG00000014722)	fhl1a (ENSCARG00000017045)	MAP7D3 (ENSCARG00000017087)	tmtops3a (ENSCARG00000017157)	cd40lg (ENSCARG00000017172)	ARHGEF6 (ENSCARG00000017195)	rbmx (ENSCARG00000017271)	ENSCARG00000036855	zic3 (ENSCARG00000037095)	zic6 (ENSCARG00000037156)	il12ba (ENSCARG00000037182) #18	RNF145 (ENSCARG00000037248) #20	ebf3a (ENSCARG00000037416) #21	clint1a (ENSCARG00000037521) #22	rnaseh2c (ENSCARG00000037611)	ZBTB3 (ENSCARG00000037646)	sytl4 (ENSCARG00000037669)	SRPX2 (ENSCARG00000037755)	ENSCARG00000037919	mrpl18 (ENSCARG00000037951)	PDGFC (ENSCARG00000037967)	glrbb (ENSCARG00000037991)	gria2b (ENSCARG00000038057)	SASH3 (ENSCARG00000039120)	zdhhc9 (ENSCARG00000039137)	itk (ENSCARG00000039149) #30	ENSCARG00000039211	ENSCARG00000039223	gria1a (ENSCARG00000039328)
Goldfish	MODERN SPECIES	32	gria1a (ENSCARG00000020365)	ENSCARG00000020419	ENSCARG00000020426	ENSCARG00000020431	zgc:194246 (ENSCARG00000020438)	foxi3b (ENSCARG00000020446)	ENSCARG00000020457	pttg1 (ENSCARG00000020532) #9	afap1l1a (ENSCARG00000020537)	ablim3 (ENSCARG00000020588)	SH3TC2 (ENSCARG00000021607)	adrb2a (ENSCARG00000021626)	il12ba (ENSCARG00000021635) #18	RNF145 (ENSCARG00000021649) #20	ebf3a (ENSCARG00000021736) #21	clint1a (ENSCARG00000021906) #22	rnaseh2c (ENSCARG00000021971)	ZBTB3 (ENSCARG00000021988)	sytl4 (ENSCARG00000021992)	SRPX2 (ENSCARG00000022029)	ENSCARG00000022070	mrpl18 (ENSCARG00000022092)	PDGFC (ENSCARG00000022101)	glrbb (ENSCARG00000022109)	gria2b (ENSCARG00000022122)	GASK1B (ENSCARG00000022320)	pitx2 (ENSCARG00000022396)	elovl6 (ENSCARG00000022412)	ENSCARG00000022447	lrit3a (ENSCARG00000022449)	gpm6aa (ENSCARG00000022458)
Cyprininae_a	ANCESTRAL SPECIES	50	ENSGT00940000167593.e.b	ENSGT00940000157840.a.a	ENSGT00940000157840.b.a	ENSGT00940000156835.l.a.a.a	ENSGT01030000235237.a	ENSGT00940000164576.b.a.a.g	ENSGT00940000166663.a	ENSGT00390000009693.gb #9	ENSGT00950000183067.a.b.a.d.a	ENSGT00950000182850.a.b.a.b.b.n.b	ENSGT00530000063812.B.g	ENSGT00940000159538.g.a.b	ENSGT00390000012630.A.b.a #18	ENSGT00940000157281.r.b.b #20	ENSGT00950000182859.A.a.b.b.d.b.b #21	ENSGT00940000155650.a.a.h #22	ENSGT00940000161486.h	ENSGT00940000166023.b	ENSGT00940000153304.A.d	ENSGT00940000159060.a	ENSGT00940000159149.c	ENSGT00940000160322.a	ENSGT00390000006394.a	ENSGT00940000158645.g.a	ENSGT00940000156344.b.f	ENSGT00940000156950.a.c	ENSGT00420000029769.b.i	ENSGT00390000012574.j.b
Common carp reference	MODERN SPECIES	20	ENSCCRG00000014538	gria1a (ENSCCRG00000064017)	ENSCCRG00000074841	ENSCCRG00000052561	ENSCCRG00000082587	ENSCCRG00000052568	foxi3b (ENSCCRG00000052574)	ENSCCRG00000052576	afap1l1a (ENSCCRG00000052582)	ablim3 (ENSCCRG00000046571)	SH3TC2 (ENSCCRG00000053204)	adrb2a (ENSCCRG00000055158)	il12ba (ENSCCRG00000061591) #18	RNF145 (ENSCCRG00000037085) #20	ebf3a (ENSCCRG00000051070) #21	clint1a (ENSCCRG00000051054) #22	ENSCCRG00000082456	rnaseh2c (ENSCCRG00000075716)	trmt12 (ENSCCRG00000050670)	ENSCCRG00000050968	ENSCCRG00000050953	mrpl18 (ENSCCRG00000036088)	PDGFC (ENSCCRG00000050934)	glrbb (ENSCCRG00000010375)	gria2b (ENSCCRG00000062450)	GASK1B (ENSCCRG00000023534)	tmem144b (ENSCCRG00000023536)	ENSCCRG00000056470	pitx2 (ENSCCRG00000078107)	ELOVL6 (ENSCCRG00000043218)	egf (ENSCCRG00000020133)
Golden-line barbel	MODERN SPECIES	501										adrb2a (ENSSGRG00000022718)	EFCAB9 (ENSSGRG00000022717)	il12ba (ENSSGRG00000022716) #18	RNF145 (ENSSGRG00000022715) #20	ENSSGRG00000022714 #20	ebf3a (ENSSGRG00000022658) #21	clint1a (ENSSGRG00000022646) #22	LSM11 (ENSSGRG00000022643) #23	ZBTB3 (ENSSGRG00000022642)	ZBTB3 (ENSSGRG00000022641)	rnaseh2c (ENSSGRG00000022640)	trmt12 (ENSSGRG00000022639)	sytl4 (ENSSGRG00000022636)	SRPX2 (ENSSGRG00000022632)	ENSSGRG00000022630	mrpl18 (ENSSGRG00000022629)	glrbb (ENSSGRG00000022614)	gria2b (ENSSGRG00000022299)	ENSSGRG00000022289	zgc:77938 (ENSSGRG00000022288)
Zebrafish	MODERN SPECIES	5	wnt8a (ENSDARG00000052910)	wnt8-2 (ENSDARG00000078507)	ENSDARG00000036215	ENSDARG00000095092	zgc:194246 (ENSDARG00000092889)	foxi3b (ENSDARG00000009550)	ENSDARG00000020901	pttg1 (ENSDARG00000075421) #9	afap1l1a (ENSDARG00000089162)	ablim3 (ENSDARG00000088168)	SH3TC2 (ENSDARG00000089917)	adrb2a (ENSDARG00000088124)	il12ba (ENSDARG00000033727) #18	RNF145 (ENSDARG00000002609) #20	ebf3a (ENSDARG00000099849) #21	clint1a (ENSDARG00000025535) #22	LSM11 (ENSDARG00000090854) #23	ZBTB3 (ENSDARG00000036235)	rnaseh2c (ENSDARG00000089637)	trmt12 (ENSDARG00000060338)	sytl4 (ENSDARG00000102433)	SRPX2 (ENSDARG00000034559)	ENSDARG00000079591	mrpl18 (ENSDARG00000060199)	PDGFC (ENSDARG00000077588)	glrbb (ENSDARG00000052769)	gria2b (ENSDARG00000052765)	GASK1B (ENSDARG00000077054)	tmem144b (ENSDARG00000036247)	adh5l (ENSDARG00000087262)	zgc:77938 (ENSDARG00000088366)
Clupeiformes	ANCESTRAL SPECIES	137																ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a
Denticle herring	DUPLICATION
Denticle herring	MODERN SPECIES	285	CPLX1 (ENSDCDG00000014795)	ENSDCDG00000014800	SLC49A3 (ENSDCDG00000014804)	TSTD2 (ENSDCDG00000014826)	atp6v0e1 (ENSDCDG00000014846)	rpl26 (ENSDCDG00000014848)	IL17B (ENSDCDG00000014850)	GPR151 (ENSDCDG00000014852)	tcerg1a (ENSDCDG00000014865)	ADAM19 (ENSDCDG00000014896) #26	thg1l (ENSDCDG00000014929) #24	LSM11 (ENSDCDG00000014930) #23	clint1a (ENSDCDG00000014935) #22	ENSDCDG00000014943	ENSDCDG00000012876	clint1a (ENSDCDG00000012880) #22	ENSDCDG00000012885 #23	thg1l (ENSDCDG00000012888) #24	ADAM19 (ENSDCDG00000012894) #26	tcerg1a (ENSDCDG00000013224)	GPR151 (ENSDCDG00000013274)	IL17B (ENSDCDG00000013276)	rpl26 (ENSDCDG00000013279)	atp6v0e1 (ENSDCDG00000013284)	TSTD2 (ENSDCDG00000013287)	ENSDCDG00000013300	SLC49A3 (ENSDCDG00000013304)	PCGF3 (ENSDCDG00000013310)	CPLX1 (ENSDCDG00000013311)	ENSDCDG00000013315	ATG2A (ENSDCDG00000013353)
Denticle herring	MODERN SPECIES	285	PCGF3 (ENSDCDG00000013310)	SLC49A3 (ENSDCDG00000013304)	ENSDCDG00000013300	TSTD2 (ENSDCDG00000013287)	atp6v0e1 (ENSDCDG00000013284)	rpl26 (ENSDCDG00000013279)	IL17B (ENSDCDG00000013276)	GPR151 (ENSDCDG00000013274)	tcerg1a (ENSDCDG00000013224)	ADAM19 (ENSDCDG00000012894) #26	thg1l (ENSDCDG00000012888) #24	ENSDCDG00000012885 #23	clint1a (ENSDCDG00000012880) #22	ENSDCDG00000012876	ENSDCDG00000014943	clint1a (ENSDCDG00000014935) #22	LSM11 (ENSDCDG00000014930) #23	thg1l (ENSDCDG00000014929) #24	ADAM19 (ENSDCDG00000014896) #26	tcerg1a (ENSDCDG00000014865)	GPR151 (ENSDCDG00000014852)	IL17B (ENSDCDG00000014850)	rpl26 (ENSDCDG00000014848)	atp6v0e1 (ENSDCDG00000014846)	TSTD2 (ENSDCDG00000014826)	SLC49A3 (ENSDCDG00000014804)	ENSDCDG00000014800	CPLX1 (ENSDCDG00000014795)	ENSDCDG00000014790	SMU1 (ENSDCDG00000014730)	ATG2A (ENSDCDG00000014613)
Atlantic herring	MODERN SPECIES	22						ENSCHAG00000016963	ENSCHAG00000016982	ENSCHAG00000017042	gria1a (ENSCHAG00000017335)	WNT8A (ENSCHAG00000017544)	ENSCHAG00000017717	zgc:194246 (ENSCHAG00000017959)	ENSCHAG00000017997	ENSCHAG00000018020	ADRB2 (ENSCHAG00000018103)	clint1a (ENSCHAG00000018163) #22	LSM11 (ENSCHAG00000018297) #23	thg1l (ENSCHAG00000018305) #24	ENSCHAG00000018310	ENSCHAG00000018331	ENSCHAG00000018347 #26	tcerg1a (ENSCHAG00000018415)	rpl26 (ENSCHAG00000018807)	atp6v0e1 (ENSCHAG00000018820)	ENSCHAG00000018838	ENSCHAG00000018879	ENSCHAG00000018935	NETO2 (ENSCHAG00000018955)	ENSCHAG00000019112	ENSCHAG00000021684	cyba (ENSCHAG00000021713)
Osteoglossocephalai	ANCESTRAL SPECIES	77	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00940000159538.g.b	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT00950000182859.A.a.b.a.b ##21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.a.b	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a
Clupeocephala	ANCESTRAL SPECIES	11	ENSGT00940000161176	ENSGT00940000156835.l.b	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00940000159538.g.b	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d #21	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT00950000182859.A.a.b.b.c.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B
Otomorpha	ANCESTRAL SPECIES	16														ENSGT00390000011206.b	ENSGT00950000182859.A.a.b.b.d.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781
Clupeiformes	ANCESTRAL SPECIES	611													ENSGT00940000166658.a.b	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25
Atlantic herring	MODERN SPECIES	24	trarg1b (ENSCHAG00000017961)	ENSCHAG00000017879	CLUH (ENSCHAG00000017011)	ENSCHAG00000016974	ENSCHAG00000016966	mtmr1b (ENSCHAG00000016948)	ENSCHAG00000016876	TRPC5 (ENSCHAG00000016821)	ENSCHAG00000016803	dacha (ENSCHAG00000016790)	ENSCHAG00000016761	stk26 (ENSCHAG00000016568)	map4k6 (ENSCHAG00000015895)	rnf145b (ENSCHAG00000015740) #20	EBF1 (ENSCHAG00000014410) #21	CLINT1 (ENSCHAG00000014354) #22	ENSCHAG00000014257 #25	ENSCHAG00000014245	TCERG1 (ENSCHAG00000013892)	ppp2r2bb (ENSCHAG00000013282)	LIMK1 (ENSCHAG00000012978)	tmem185 (ENSCHAG00000012879)	ANKRD46 (ENSCHAG00000012855)	atg4a (ENSCHAG00000012475)	ENSCHAG00000012444	ENSCHAG00000011240	ENSCHAG00000011183	ENSCHAG00000011162	zgc:103508 (ENSCHAG00000011099)	rnasekb (ENSCHAG00000011094)	arrb2a (ENSCHAG00000005285)
Denticle herring	MODERN SPECIES	16	septin4a (ENSDCDG00000002862)	EOLA1 (ENSDCDG00000002849)	mtmr1b (ENSDCDG00000002678)	hmgb3b (ENSDCDG00000002660)	ENSDCDG00000002655	TRPC5 (ENSDCDG00000002650)	alg13 (ENSDCDG00000002634)	ENSDCDG00000002630	dacha (ENSDCDG00000002625)	chm (ENSDCDG00000002621)	ENSDCDG00000002617	stk26 (ENSDCDG00000002601)	map4k6 (ENSDCDG00000002175)	rnf145b (ENSDCDG00000001986) #20	EBF1 (ENSDCDG00000001962) #21	CLINT1 (ENSDCDG00000001938) #22	ENSDCDG00000001931	HRH2 (ENSDCDG00000001925)	ENSDCDG00000001920	npm1a (ENSDCDG00000001918)	npm1a (ENSDCDG00000001915)	kcnip1b (ENSDCDG00000001912)	kcnip1b (ENSDCDG00000001900)	npm1a (ENSDCDG00000001887)	kcnip1b (ENSDCDG00000001875)	npm1a (ENSDCDG00000001867)	tlx3b (ENSDCDG00000001860)	ugt5g2 (ENSDCDG00000001854)	ponzr2 (ENSDCDG00000001848)	cldn7b (ENSDCDG00000001842)	FGF11 (ENSDCDG00000001836)
Otophysi	ANCESTRAL SPECIES	137														ENSGT01030000234518.A.a.b	ENSGT00950000182859.A.a.b.b.d.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b
Characiphysae	ANCESTRAL SPECIES	7	ENSGT00940000165073.a.a	ENSGT00940000154902	ENSGT00940000159818	ENSGT00940000158335	ENSGT00940000156656	ENSGT00940000159460	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157427.j	ENSGT00940000156381	ENSGT00940000153404.a	ENSGT00940000166874	ENSGT00950000182972.a.a.a.a.a.e	ENSGT01030000234518.A.a.b	ENSGT00950000182859.A.a.b.b.d.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000008104	ENSGT00510000048574	ENSGT00940000166453.b	ENSGT01000000214440.C	ENSGT00390000002089.a.a.b	ENSGT00730000111187.a.a	ENSGT00940000160310.a	ENSGT00940000166208	ENSGT00940000164608	ENSGT00620000087966.b	ENSGT00390000007539.a	ENSGT00940000156764.b
Channel catfish	MODERN SPECIES	9	cpeb4 (ENSIPUG00000005518)	Bod1 (ENSIPUG00000005588)	STC2 (ENSIPUG00000005604)	BNIP1 (ENSIPUG00000005648)	crebrf (ENSIPUG00000005676)	ATP6V0E1 (ENSIPUG00000005718)	pcyox1l (ENSIPUG00000005730)	ENSIPUG00000005766	TCERG1 (ENSIPUG00000005815)	mrm3b (ENSIPUG00000005839)	ENSIPUG00000005856	EOLA1 (ENSIPUG00000005862)	Map4k2 (ENSIPUG00000005883)	rnf145 (ENSIPUG00000006067) #20	EBF1 (ENSIPUG00000006093) #21	CLINT1 (ENSIPUG00000006181) #22	rars (ENSIPUG00000006210)	ENSIPUG00000006259	sgcd (ENSIPUG00000006316) #34	mrpl22 (ENSIPUG00000006432) #35	Gemin5 (ENSIPUG00000006460) #36	cnot8 (ENSIPUG00000006574) #37	wwc1 (ENSIPUG00000006631)	ARL10 (ENSIPUG00000006668)	nop16 (ENSIPUG00000006682)	grk6 (ENSIPUG00000006711)	PRR7 (ENSIPUG00000006782)	ENSIPUG00000006795	zgc:77151 (ENSIPUG00000006824)	uimc1 (ENSIPUG00000006845)	znf346 (ENSIPUG00000006892)
Characiphysae_b	ANCESTRAL SPECIES	7	ENSGT00390000007552	ENSGT00940000165073.a.a	ENSGT00940000154902.ob	ENSGT00940000159818	ENSGT00940000158335	ENSGT00940000156656	ENSGT00940000159460	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157427.j	ENSGT00940000156381	ENSGT00940000153404.a	ENSGT00940000166874	ENSGT00950000182972.a.a.a.a.a.e	ENSGT00950000182859.A.a.b.b.d.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000008104	ENSGT00510000048574	ENSGT00940000166453.b	ENSGT01000000214440.C	ENSGT00390000002089.a.a.b	ENSGT00730000111187.a.a	ENSGT00940000160310.a	ENSGT00940000166208	ENSGT00940000164608	ENSGT00620000087966.b	ENSGT00390000007539.a
Characoidei	ANCESTRAL SPECIES	2	ENSGT00390000008975	ENSGT00390000007552	ENSGT00940000165073.a.a	ENSGT00940000154902.ob	ENSGT00940000159818	ENSGT00940000158335	ENSGT00940000156656	ENSGT00940000159460	ENSGT00940000165959	ENSGT00510000047029	ENSGT00940000157427.j	ENSGT00940000156381	ENSGT00940000153404.a	ENSGT00940000166874	ENSGT00950000182972.a.a.a.a.a.e	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000008104	ENSGT00510000048574	ENSGT00940000166453.b	ENSGT01000000214440.C	ENSGT00390000002089.a.a.b	ENSGT00730000111187.a.a	ENSGT00940000160310.a	ENSGT00940000166208	ENSGT00940000164608	ENSGT00620000087966.b	ENSGT00390000007539.a
Red-bellied piranha	MODERN SPECIES	416																CLINT1 (ENSPNAG00000027458) #22	ENSPNAG00000027492 #25	TCERG1 (ENSPNAG00000027515)	ENSPNAG00000027537	ENSPNAG00000004241	PCYOX1L (ENSPNAG00000027632)	ATP6V0E1 (ENSPNAG00000027653)	CREBRF (ENSPNAG00000027734)	BNIP1 (ENSPNAG00000004841)	STC2 (ENSPNAG00000027812)	bod1 (ENSPNAG00000027835)	CPEB4 (ENSPNAG00000027950)	nsg2 (ENSPNAG00000006487)	msx2b (ENSPNAG00000027987)
Electric eel	MODERN SPECIES	459												EOLA1 (ENSEEEG00000014637)	map4k6 (ENSEEEG00000014385)	rnf145b (ENSEEEG00000014357) #20	EBF1 (ENSEEEG00000014328) #21	CLINT1 (ENSEEEG00000014320) #22	ENSEEEG00000014318 #25	TCERG1 (ENSEEEG00000014311)	ENSEEEG00000014217	ENSEEEG00000014200	PCYOX1L (ENSEEEG00000014195)	CREBRF (ENSEEEG00000014166)	BNIP1 (ENSEEEG00000014162)	STC2 (ENSEEEG00000014160)
Cyprinoidei	ANCESTRAL SPECIES	31	ENSGT00390000000973.a.a	ENSGT00390000014635	ENSGT00940000159492	ENSGT00940000158625	ENSGT00940000153169.A.b.b.f	ENSGT00950000182859.A.a.a.a ##21	ENSGT00940000156141.B	ENSGT00530000063506.A	ENSGT00530000063555.A.a.a	ENSGT00950000183132.C	ENSGT00390000001695	ENSGT00940000155341	ENSGT00940000155244.d	ENSGT00940000153596.A	ENSGT00950000182859.A.a.b.b.d.a #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b.b	ENSGT00940000160854	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000016307	ENSGT00390000001733	ENSGT01030000234625.C	ENSGT00940000158395	ENSGT00950000182938.b.b.b.a.b.b	ENSGT00940000155007.m	ENSGT00390000013344
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	309							ENSGT00390000001134.b.ab.b	ENSGT00940000159922.a.a.i	ENSGT01060000248594.e.a.d.b	ENSGT00940000153299.a.b.a.a	ENSGT00940000153669.b.p.b	ENSGT00390000012182.pb	ENSGT00940000166658.a.c	ENSGT00940000157281.r.a.a #20	ENSGT00950000182859.A.a.b.b.d.a.a #21	ENSGT00940000155650.a.b.a #22	ENSGT00940000157770.j.a	ENSGT00950000182864.a.b.b.a.b.a.b.f	ENSGT00390000011206.b.b.a	ENSGT00390000007125.b.f	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b.h	ENSGT00940000156198.c.b.b.b.a	ENSGT00390000005989.a.b.a.b.g	ENSGT00940000156198.c.b.b.b.b	ENSGT00940000160357.f	ENSGT00390000000483.a.a.a	ENSGT00940000164716.B.d	ENSGT00940000155857.f.b.f	ENSGT00390000018781.z.a.a	ENSGT00990000209912.a
Goldfish	MODERN SPECIES	40	stk26 (ENSCARG00000040857)	frmd7 (ENSCARG00000040753)	CCNI2 (ENSCARG00000040736)	septin8a (ENSCARG00000038729)	SOWAHA (ENSCARG00000038612)	ENSCARG00000038609	mep1ba (ENSCARG00000038602)	TRPC5 (ENSCARG00000038549)	hmgb3b (ENSCARG00000038532)	mtmr1b (ENSCARG00000037892)	ENSCARG00000037723	map4k6 (ENSCARG00000037620)	ENSCARG00000037589	rnf145b (ENSCARG00000037460) #20	EBF1 (ENSCARG00000036745) #21	CLINT1 (ENSCARG00000036681) #22	TCERG1 (ENSCARG00000036488)	ppp2r2bb (ENSCARG00000036318)	CREBRF (ENSCARG00000036267)	STC2 (ENSCARG00000036259)	bod1 (ENSCARG00000036253)	cpeb4b (ENSCARG00000036035)	msx2b (ENSCARG00000035982)	ENSCARG00000035971	drd1b (ENSCARG00000035964)	RAD50 (ENSCARG00000035313)	il13 (ENSCARG00000035284)	pou4f3 (ENSCARG00000035276)	RBM27 (ENSCARG00000035200)	LARS1 (ENSCARG00000034948)	PLAC8L1 (ENSCARG00000034885)
Cyprininae_a	ANCESTRAL SPECIES	83	ENSGT00390000000378.d.a.o.a.f	ENSGT00940000155585.b	ENSGT00390000017203.d	ENSGT00950000182987.c.a.b.a.e.a	ENSGT00950000182994.A.b	ENSGT00390000001134.b.ab.a.a	ENSGT00940000159922.a.a.i	ENSGT01060000248594.e.a.d.b	ENSGT00940000153299.a.b.a.a	ENSGT00940000153669.b.p.b	ENSGT00390000012182.pb	ENSGT00390000012182.qb	ENSGT00940000166658.a.c	ENSGT00940000157281.r.a.a #20	ENSGT00950000182859.A.a.b.b.d.a.a #21	ENSGT00940000155650.a.b.a #22	ENSGT00940000157770.j.a	ENSGT00950000182864.a.b.b.a.b.a.b.f.a	ENSGT00390000011206.b.b.a	ENSGT00390000007125.b.f	ENSGT00390000014412.k.d	ENSGT00390000005989.a.b.a.b.g	ENSGT00940000156198.c.b.b.b.b	ENSGT00940000154998.a.a.u	ENSGT00390000000483.a.a.a	ENSGT00940000164716.B.d	ENSGT00940000155857.f.b.f	ENSGT00390000018781.z.a.a	ENSGT00990000209912.a	ENSGT00940000160880.e	ENSGT00510000046929.b.f
Common carp reference	MODERN SPECIES	38	hnf1bb (ENSCCRG00000018096)	heatr6 (ENSCCRG00000018151)	dynll2b (ENSCCRG00000056005)	srsf1b (ENSCCRG00000079952)	pigs (ENSCCRG00000029318)	aldocb (ENSCCRG00000028962)	chm (ENSCCRG00000029326)	dacha (ENSCCRG00000074794)	alg13 (ENSCCRG00000039010)	ENSCCRG00000039080	hmgb3b (ENSCCRG00000039124)	mtmr1b (ENSCCRG00000004352)	map4k6 (ENSCCRG00000059691)	rnf145b (ENSCCRG00000006311) #20	ENSCCRG00000018557 #21	CLINT1 (ENSCCRG00000031700) #22	ENSCCRG00000031618	ppp2r2bb (ENSCCRG00000031606)	ENSCCRG00000005935	CREBRF (ENSCCRG00000071548)	BNIP1 (ENSCCRG00000005978)	STC2 (ENSCCRG00000006015)	bod1 (ENSCCRG00000058933)	CPEB4 (ENSCCRG00000027289)	nsg2 (ENSCCRG00000055410)	ENSCCRG00000074707	msx2b (ENSCCRG00000061968)	ENSCCRG00000024470	drd1b (ENSCCRG00000075305)	ENSCCRG00000046555	pou4f3 (ENSCCRG00000033292)
Golden-line barbel	MODERN SPECIES	90	aldocb (ENSSGRG00000053779)	ENSSGRG00000054232	chm (ENSSGRG00000054233)	dacha (ENSSGRG00000054235)	alg13 (ENSSGRG00000054236)	TRPC5 (ENSSGRG00000054238)	hmgb3b (ENSSGRG00000054240)	mtmr1b (ENSSGRG00000054242)	ENSSGRG00000054244	ENSSGRG00000054246	map4k6 (ENSSGRG00000054251)	ENSSGRG00000054341	rnf145b (ENSSGRG00000054345) #20	EBF1 (ENSSGRG00000054348) #21	ENSSGRG00000054351 #22	CLINT1 (ENSSGRG00000054352) #22	TCERG1 (ENSSGRG00000054353)	ppp2r2bb (ENSSGRG00000054355)	PCYOX1L (ENSSGRG00000054370)	CREBRF (ENSSGRG00000054373)	BNIP1 (ENSSGRG00000054374)	STC2 (ENSSGRG00000054376)	bod1 (ENSSGRG00000054377)	CPEB4 (ENSSGRG00000054379)	nsg2 (ENSSGRG00000054408)	msx2b (ENSSGRG00000054409)	drd1b (ENSSGRG00000054410)	RAD50 (ENSSGRG00000054417)	ENSSGRG00000054462	il13 (ENSSGRG00000054463)	pou4f3 (ENSSGRG00000054464)
Cyprininae	ANCESTRAL SPECIES	110	ENSGT00390000017203.c	ENSGT00950000182987.c.a.b.a.e.b	ENSGT00940000160082.a.b	ENSGT00940000166642.f	ENSGT00390000014139	ENSGT00950000182994.A.a	ENSGT00390000001134.b.ab.a.b	ENSGT00940000159922.a.a.j	ENSGT01060000248594.e.a.d.a	ENSGT00940000153299.a.b.a.b	ENSGT00940000153669.b.p.a	ENSGT00390000012182.qb	ENSGT00940000166658.a.d	ENSGT00940000157281.r.a.b #20	ENSGT00950000182859.A.a.b.b.d.a.b #21	ENSGT00940000155650.a.b.b #22	ENSGT00940000161042 #25	ENSGT00940000157770.j.b	ENSGT00390000011206.b.a	ENSGT00390000007125.b.e
Goldfish	MODERN SPECIES	13	pigs (ENSCARG00000010251)	aldocb (ENSCARG00000010346)	ENSCARG00000010435	mrm3b (ENSCARG00000010445)	ENSCARG00000010449	chm (ENSCARG00000010473)	dacha (ENSCARG00000010526)	alg13 (ENSCARG00000010575)	TRPC5 (ENSCARG00000010615)	hmgb3b (ENSCARG00000010657)	mtmr1b (ENSCARG00000010701)	ENSCARG00000011056	map4k6 (ENSCARG00000011148)	rnf145b (ENSCARG00000013065) #20	EBF1 (ENSCARG00000013117) #21	CLINT1 (ENSCARG00000013940) #22	ENSCARG00000013950 #25	TCERG1 (ENSCARG00000013998)	ENSCARG00000014632	ENSCARG00000014636	PCYOX1L (ENSCARG00000014644)	CREBRF (ENSCARG00000014657)	ENSCARG00000014678	ENSCARG00000014778	irf1b (ENSCARG00000016132)	ENSCARG00000016141	sar1b (ENSCARG00000016149)	camlg (ENSCARG00000016166)	ENSCARG00000016169	vdac1 (ENSCARG00000016185)	ENSCARG00000016301
Cyprininae_a	ANCESTRAL SPECIES	62	ENSGT00390000000378.d.a.o.a.e	ENSGT00940000164330.l	ENSGT00390000017203.c	ENSGT00950000182987.c.a.b.a.e.b	ENSGT00940000160082.a.b	ENSGT00940000166642.f	ENSGT00390000014139	ENSGT00950000182994.A.a	ENSGT00390000001134.b.ab.a.b	ENSGT00940000159922.a.a.j	ENSGT01060000248594.e.a.d.a	ENSGT00940000153669.b.p.a	ENSGT00940000166658.a.d	ENSGT00940000157281.r.a.b #20	ENSGT00950000182859.A.a.b.b.d.a.b #21	ENSGT00940000155650.a.b.b #22	ENSGT00940000161042 #25	ENSGT00940000157770.j.b	ENSGT00950000182864.a.b.b.a.b.a.b.f.b	ENSGT00390000011206.b.b.b	ENSGT00390000007125.b.e	ENSGT00390000014412.k.c	ENSGT00390000005989.a.b.a.b.h	ENSGT00940000156198.c.b.b.b.a	ENSGT00940000154998.a.a.v	ENSGT00390000000483.a.a.b	ENSGT00940000164716.B.c	ENSGT00940000155857.f.b.e	ENSGT00390000018781.z.a.b	ENSGT00990000209912.b	ENSGT00940000160880.f
Common carp reference	MODERN SPECIES	45	ENSCCRG00000022508	pigs (ENSCCRG00000022521)	aldocb (ENSCCRG00000067286)	ENSCCRG00000029273	mrm3b (ENSCCRG00000029278)	ENSCCRG00000014148	chm (ENSCCRG00000014136)	dacha (ENSCCRG00000062944)	alg13 (ENSCCRG00000032980)	ENSCCRG00000037088	mtmr1b (ENSCCRG00000017308)	ENSCCRG00000020923	map4k6 (ENSCCRG00000020928)	rnf145b (ENSCCRG00000020566) #20	ENSCCRG00000072604 #21	CLINT1 (ENSCCRG00000030822) #22	ENSCCRG00000030818 #25	ENSCCRG00000030282	ppp2r2bb (ENSCCRG00000030261)	ENSCCRG00000057975	CREBRF (ENSCCRG00000078346)	BNIP1 (ENSCCRG00000076550)	STC2 (ENSCCRG00000070068)	bod1 (ENSCCRG00000076101)	CPEB4 (ENSCCRG00000029587)	nsg2 (ENSCCRG00000054392)	ENSCCRG00000055585	msx2b (ENSCCRG00000060099)	ENSCCRG00000062661	drd1b (ENSCCRG00000057876)	ENSCCRG00000022182
Golden-line barbel	MODERN SPECIES	38	heatr6 (ENSSGRG00000045575)	ENSSGRG00000045574	dynll2b (ENSSGRG00000045555)	pigs (ENSSGRG00000045552)	ENSSGRG00000045551	mrm3b (ENSSGRG00000045545)	chm (ENSSGRG00000045542)	dacha (ENSSGRG00000045540)	alg13 (ENSSGRG00000045539)	TRPC5 (ENSSGRG00000045537)	mtmr1b (ENSSGRG00000045352)	map4k6 (ENSSGRG00000045168)	rnf145b (ENSSGRG00000045155) #20	EBF1 (ENSSGRG00000044050) #21	ENSSGRG00000044028 #22	CLINT1 (ENSSGRG00000044027) #22	TCERG1 (ENSSGRG00000043989)	ppp2r2bb (ENSSGRG00000043826)	PCYOX1L (ENSSGRG00000043824)	CREBRF (ENSSGRG00000043793)	BNIP1 (ENSSGRG00000043791)	STC2 (ENSSGRG00000043790)	bod1 (ENSSGRG00000043789)	cpeb4b (ENSSGRG00000043538)	nsg2 (ENSSGRG00000043535)	msx2b (ENSSGRG00000043534)	drd1b (ENSSGRG00000043533)	RAD50 (ENSSGRG00000043514)	il13 (ENSSGRG00000043508)	il13 (ENSSGRG00000043500)	pou4f3 (ENSSGRG00000043499)
Zebrafish	MODERN SPECIES	13	gfpt2 (ENSDARG00000044094)	zgc:123105 (ENSDARG00000003127)	ENSDARG00000073704	ENSDARG00000075930	cnot6a (ENSDARG00000008255)	adra2db (ENSDARG00000054667)	SLC34A1 (ENSDARG00000054658)	ENSDARG00000060200	arl3l1 (ENSDARG00000111106)	ENSDARG00000104924	rbm22 (ENSDARG00000010238)	ndst1b (ENSDARG00000103606)	rps14 (ENSDARG00000036629)	cd74b (ENSDARG00000036628)	ENSDARG00000110481	CLINT1 (ENSDARG00000089914) #22	EBF1 (ENSDARG00000069196) #21	ENSDARG00000092635 #21	rnf145b (ENSDARG00000032373) #20	map4k6 (ENSDARG00000033444)	ENSDARG00000111280	mtmr1b (ENSDARG00000022378)	hmgb3b (ENSDARG00000006408)	TRPC5 (ENSDARG00000060837)	alg13 (ENSDARG00000054374)	dacha (ENSDARG00000010132)	chm (ENSDARG00000003845)	wdr55 (ENSDARG00000007217)	zgc:56585 (ENSDARG00000026236)	cdc23 (ENSDARG00000044484)	kif20a (ENSDARG00000044491)
Euteleosteomorpha	ANCESTRAL SPECIES	422															ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770
Protacanthopterygii	DUPLICATION
Protacanthopterygii	ANCESTRAL SPECIES	44	ENSGT00530000063371.C.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835.l.b	ENSGT00940000164576.b.a.b	ENSGT00550000074939	ENSGT00390000005589.a.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00940000159538.g.b	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.c.a #21	ENSGT00940000155650.a.b.c #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00950000182864.a.b.b.a.b.a.b.a	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a.w	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a	ENSGT00940000164716.B	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000160880
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	210															ENSGT00950000182859.A.a.b.b.c.a #21	ENSGT00940000155650.a.b.c.a #22	ENSGT00940000161042 #25	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00390000007125.b.b	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h
Salmoninae_a	ANCESTRAL SPECIES	4	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a	ENSGT00390000012630.A.a.a #18	ENSGT00390000010107.u #19	ENSGT00940000157281.u #20	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b #21	ENSGT00950000182859.A.a.a.a.e ##21	ENSGT00950000182859.A.a.b.b.c.a.a #21	ENSGT00940000155650.a.b.c.a #22	ENSGT00940000161042 #25	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00990000214210	ENSGT00390000007125.b.b	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177
Salmo	ANCESTRAL SPECIES	44	ENSGT00940000164705.e	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a	ENSGT00390000012630.A.a.a #18	ENSGT00390000010107.u #19	ENSGT00940000157281.u #20	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.b #21	ENSGT00950000182859.A.a.a.a.e ##21	ENSGT00950000182859.A.a.b.b.c.a.a #21	ENSGT00940000155650.a.b.c.a #22	ENSGT00940000161042 #25	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00990000214210	ENSGT00390000007125.b.b	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177
Atlantic salmon	MODERN SPECIES	4	ENSSSAG00000069406	ctbp2 (ENSSSAG00000069412)	fam53c (ENSSSAG00000095597)	ENSSSAG00000069491	lcp2 (ENSSSAG00000069494)	foxi3a (ENSSSAG00000090123)	nola2 (ENSSSAG00000069506)	afap1l1b (ENSSSAG00000069515)	ABLIM3 (ENSSSAG00000069535)	adrb2b (ENSSSAG00000100403)	ubtd2 (ENSSSAG00000069624)	IL12p40b2 (ENSSSAG00000069633) #18	UBLCP1 (ENSSSAG00000069642) #19	RNF145 (ENSSSAG00000069680) #20	ebf1 (ENSSSAG00000070298) #21	CLINT1 (ENSSSAG00000072862) #22	ENSSSAG00000072867 #25	ENSSSAG00000072917	ENSSSAG00000073861	ENSSSAG00000103687	ENSSSAG00000086568	ENSSSAG00000073883	CREBRF (ENSSSAG00000073887)	BNIP1 (ENSSSAG00000108295)	STC2 (ENSSSAG00000073897)	fa44b (ENSSSAG00000073900)	CPEB4 (ENSSSAG00000073910)	nsg2 (ENSSSAG00000108039)	msx2b (ENSSSAG00000074113)	ENSSSAG00000121958	drd1b (ENSSSAG00000074115)
River trout	MODERN SPECIES	6	slbp2 (ENSSTUG00000011232)	ENSSTUG00000011244	foxi3a (ENSSTUG00000011289)	nhp2 (ENSSTUG00000011301)	grpel2 (ENSSTUG00000011320)	afap1l1b (ENSSTUG00000011335)	ablim3 (ENSSTUG00000011402)	adrb2b (ENSSTUG00000011494)	ubtd2 (ENSSTUG00000011499)	ENSSTUG00000011515	IL12B (ENSSTUG00000011518) #18	UBLCP1 (ENSSTUG00000011536) #19	RNF145 (ENSSTUG00000011631) #20	EBF1 (ENSSTUG00000011739) #21	ENSSTUG00000011744 ##21	CLINT1 (ENSSTUG00000011752) #22	ENSSTUG00000011800 #25	TCERG1 (ENSSTUG00000011818)	ENSSTUG00000012111	PCYOX1L (ENSSTUG00000012245)	ENSSTUG00000012264	CREBRF (ENSSTUG00000012271)	BNIP1 (ENSSTUG00000012299)	STC2 (ENSSTUG00000012322)	bod1 (ENSSTUG00000012340)	CPEB4 (ENSSTUG00000012363)	nsg2 (ENSSTUG00000012611)	msx2b (ENSSTUG00000012621)	drd1b (ENSSTUG00000012628)	RAD50 (ENSSTUG00000012660)	ENSSTUG00000013572
Oncorhynchus	ANCESTRAL SPECIES	4	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000156835.l.b.a	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a	ENSGT00390000012630.A.a.a #18	ENSGT00390000010107.u #19	ENSGT00940000157281.u #20	ENSGT00950000182859.A.a.b.b.c.a.a #21	ENSGT00940000155650.a.b.c.a #22	ENSGT00940000161042.d #25	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00990000214210	ENSGT00390000007125.b.b	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177
Oncorhynchus_a	ANCESTRAL SPECIES	2	ENSGT00940000163509.b.h	ENSGT00940000165075.a.b.a.b	ENSGT00940000157061.b.k.b.b	ENSGT00530000063371.C.a.d	ENSGT00940000164576.b.a.b.d	ENSGT00550000074939.b	ENSGT00390000005589.a.b.r	ENSGT00950000183067.a.b.a.c.e.a	ENSGT00950000182850.a.b.a.b.b.p	ENSGT00940000159538.g.b.a	ENSGT00940000156641.m.a	ENSGT00390000012630.A.a.a #18	ENSGT00390000010107.u #19	ENSGT00940000157281.u #20	ENSGT00950000182859.A.a.b.b.c.a.a #21	ENSGT00940000155650.a.b.c.a #22	ENSGT00940000161042.d #25	ENSGT00940000157770.a.a	ENSGT00950000182864.a.b.b.a.b.a.b.a.a	ENSGT00390000011206.b	ENSGT00390000007125.b.b	ENSGT00390000014412.k.b	ENSGT00390000005989.a.b.a.b.b	ENSGT00940000156198.c.b.c	ENSGT00940000154998.a.a.x	ENSGT00390000000483.a.a.c	ENSGT00940000164716.B.b	ENSGT00940000155857.f.b.d	ENSGT00390000018781	ENSGT00970000197177	ENSGT00940000160880.h
Chinook salmon	MODERN SPECIES	33	ENSOTSG00005007735	ENSOTSG00005007480	fam53c (ENSOTSG00005007473)	foxi3a (ENSOTSG00005007472)	nhp2 (ENSOTSG00005007470)	grpel2 (ENSOTSG00005007469)	ENSOTSG00005007466	afap1l1b (ENSOTSG00005007463)	ablim3 (ENSOTSG00005006050)	adrb2b (ENSOTSG00005006040)	ubtd2 (ENSOTSG00005006038)	IL12B (ENSOTSG00005006037) #18	UBLCP1 (ENSOTSG00005006034) #19	RNF145 (ENSOTSG00005005977) #20	EBF1 (ENSOTSG00005005972) ##21	CLINT1 (ENSOTSG00005005969) #22	ENSOTSG00005005967 #25	TCERG1 (ENSOTSG00005005804)	ENSOTSG00005005782	PCYOX1L (ENSOTSG00005005777)	ENSOTSG00005005747	CREBRF (ENSOTSG00005005738)	BNIP1 (ENSOTSG00005005730)	STC2 (ENSOTSG00005047595)	bod1 (ENSOTSG00005047594)	CPEB4 (ENSOTSG00005047591)	nsg2 (ENSOTSG00005047590)	RAD54L2 (ENSOTSG00005047589)	tmem115 (ENSOTSG00005047588)	ENSOTSG00005047587	sema3h (ENSOTSG00005047586)
Coho salmon	MODERN SPECIES	26	ENSOKIG00005002891	timd4 (ENSOKIG00005002884)	ENSOKIG00005002877	ENSOKIG00005002826	ENSOKIG00005002814	foxi3a (ENSOKIG00005002795)	ENSOKIG00005002782	afap1l1b (ENSOKIG00005002733)	ABLIM3 (ENSOKIG00005002317)	adrb2b (ENSOKIG00005002209)	ubtd2 (ENSOKIG00005002179)	IL12B (ENSOKIG00005002154) #18	UBLCP1 (ENSOKIG00005002126) #19	RNF145 (ENSOKIG00005002040) #20	EBF1 (ENSOKIG00005001939) #21	CLINT1 (ENSOKIG00005001894) #22	ENSOKIG00005001865 #25	TCERG1 (ENSOKIG00005001795)	ENSOKIG00005001711	PCYOX1L (ENSOKIG00005001695)	CREBRF (ENSOKIG00005001682)	BNIP1 (ENSOKIG00005050293)	STC2 (ENSOKIG00005050291)	bod1 (ENSOKIG00005050285)	CPEB4 (ENSOKIG00005050275)	nsg2 (ENSOKIG00005050268)	ENSOKIG00005050265	msx2b (ENSOKIG00005050264)	drd1b (ENSOKIG00005050262)	RAD50 (ENSOKIG00005050222)	ENSOKIG00005050203
Rainbow trout	MODERN SPECIES	3	foxi3a (ENSOMYG00000017410)	ENSOMYG00000017396	nhp2 (ENSOMYG00000075157)	ENSOMYG00000071550	grpel2 (ENSOMYG00000017377)	afap1l1b (ENSOMYG00000017287)	ABLIM3 (ENSOMYG00000017213)	adrb2b (ENSOMYG00000017194)	ubtd2 (ENSOMYG00000017184)	ENSOMYG00000049547	il-12B2 (ENSOMYG00000017163) #18	UBLCP1 (ENSOMYG00000017128) #19	RNF145 (ENSOMYG00000017078) #20	ENSOMYG00000053188	EBF1 (ENSOMYG00000016373) #21	CLINT1 (ENSOMYG00000016310) #22	ENSOMYG00000016303 #25	ENSOMYG00000016176	ENSOMYG00000016167	ENSOMYG00000016147	ENSOMYG00000016135	CREBRF (ENSOMYG00000016119)	sec20 (ENSOMYG00000016108)	STC2 (ENSOMYG00000016097)	bod1 (ENSOMYG00000016088)	CPEB4 (ENSOMYG00000015957)	ENSOMYG00000009557	nsg2 (ENSOMYG00000015936)	msx2b (ENSOMYG00000056772)	drd1b (ENSOMYG00000015927)	ENSOMYG00000015782
Huchen	MODERN SPECIES	2037														ENSHHUG00000028534	EBF1 (ENSHHUG00000028536) #21	CLINT1 (ENSHHUG00000028538) #22	ENSHHUG00000028542 #25	TCERG1 (ENSHHUG00000028549)	ENSHHUG00000028557
Salmoninae	ANCESTRAL SPECIES	39	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b	ENSGT00390000012630.A.a.b #18	ENSGT00390000010107.v #19	ENSGT00940000157281.v #20	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.a #21	ENSGT00940000155650.a.b.c.b #22	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g	ENSGT00510000046929.b.c	ENSGT00390000012163.d	ENSGT00940000160864.b
Huchen	MODERN SPECIES	1895																CLINT1 (ENSHHUG00000027284) #22	ENSHHUG00000027327	TCERG1 (ENSHHUG00000027337)	PPP2R2B (ENSHHUG00000027375)
Salmoninae_a	ANCESTRAL SPECIES	44	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b	ENSGT00390000012630.A.a.b #18	ENSGT00390000010107.v #19	ENSGT00940000157281.v #20	ENSGT00950000182859.A.a.b.b.c.a.b #21	ENSGT00940000155650.a.b.c.b #22	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g	ENSGT00510000046929.b.c	ENSGT00390000012163.d	ENSGT00940000160864.b
Salmo	ANCESTRAL SPECIES	17	ENSGT00530000063371.C.a.c	ENSGT00940000164705.f	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b	ENSGT00390000012630.A.a.b #18	ENSGT00390000010107.v #19	ENSGT00940000157281.v #20	ENSGT00950000182859.A.a.b.b.c.a.b #21	ENSGT00940000155650.a.b.c.b #22	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g	ENSGT00510000046929.b.c	ENSGT00390000012163.d	ENSGT00940000160864.b
Atlantic salmon	MODERN SPECIES	23	fam53c (ENSSSAG00000079951)	slbp2 (ENSSSAG00000079947)	zmat2 (ENSSSAG00000079943)	LCP2 (ENSSSAG00000079937)	foxi3a (ENSSSAG00000092072)	nhp2 (ENSSSAG00000098655)	grpel2 (ENSSSAG00000079928)	afap1l1b (ENSSSAG00000079915)	ABLIM3 (ENSSSAG00000079852)	adrb2b (ENSSSAG00000110588)	ubtd2 (ENSSSAG00000096167)	IL12B (ENSSSAG00000079839) #18	UBLCP1 (ENSSSAG00000079817) #19	RNF145 (ENSSSAG00000079811) #20	EBF1 (ENSSSAG00000079780) #21	CLINT1 (ENSSSAG00000079767) #22	ENSSSAG00000079669	ENSSSAG00000106518	ATP6V0E1 (ENSSSAG00000115307)	CREBRF (ENSSSAG00000079350)	BNIP1 (ENSSSAG00000079340)	STC2 (ENSSSAG00000079338)	FA44B (ENSSSAG00000079334)	CPEB4 (ENSSSAG00000079086)	nsg2 (ENSSSAG00000117002)	msx2b (ENSSSAG00000117200)	DRD1 (ENSSSAG00000079063)	pou4f3 (ENSSSAG00000079060)	RBM27 (ENSSSAG00000079044)	ENSSSAG00000079034	ENSSSAG00000114419
River trout	MODERN SPECIES	10	ENSSTUG00000036388	fam53c (ENSSTUG00000036624)	slbp2 (ENSSTUG00000002198)	zmat2 (ENSSTUG00000002672)	ENSSTUG00000002942	foxi3a (ENSSTUG00000003014)	nhp2 (ENSSTUG00000003023)	grpel2 (ENSSTUG00000003032)	afap1l1b (ENSSTUG00000003044)	ablim3 (ENSSTUG00000003154)	adrb2b (ENSSTUG00000004048)	ubtd2 (ENSSTUG00000004054)	IL12B (ENSSTUG00000004099) #18	UBLCP1 (ENSSTUG00000004208) #19	RNF145 (ENSSTUG00000004290) #20	CLINT1 (ENSSTUG00000004381) #22	TCERG1 (ENSSTUG00000004428)	ENSSTUG00000004656	ENSSTUG00000004825	ATP6V0E1 (ENSSTUG00000004829)	CREBRF (ENSSTUG00000004839)	BNIP1 (ENSSTUG00000004871)	STC2 (ENSSTUG00000004904)	bod1 (ENSSTUG00000004914)	CPEB4 (ENSSTUG00000004949)	nsg2 (ENSSTUG00000005361)	msx2b (ENSSTUG00000005380)	ENSSTUG00000005387	drd1b (ENSSTUG00000005395)	pou4f3 (ENSSTUG00000005405)	RBM27 (ENSSTUG00000005420)
Oncorhynchus	ANCESTRAL SPECIES	41	ENSGT00390000010712	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b	ENSGT00390000012630.A.a.b #18	ENSGT00390000010107.v #19	ENSGT00940000157281.v #20	ENSGT00950000182859.A.a.b.b.c.a.b #21	ENSGT00950000182859.A.a.b.b.c.b #21	ENSGT00950000182859.A.a.a.a.e ##21	ENSGT00940000155650.a.b.c.b #22	ENSGT00940000161042.c #25	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g	ENSGT00510000046929.b.c	ENSGT00390000012163.d
Oncorhynchus_a	ANCESTRAL SPECIES	43	ENSGT00940000156835.l.b.b	ENSGT00940000164576.b.a.b.c	ENSGT00550000074939.a	ENSGT00390000005589.a.b.q	ENSGT00950000183067.a.b.a.c.e.b	ENSGT00950000182850.a.b.a.b.a.b.g.b.b	ENSGT00950000182850.a.b.a.b.b.o	ENSGT00940000159538.g.b.b	ENSGT00940000156641.m.b	ENSGT00390000012630.A.a.b #18	ENSGT00390000010107.v #19	ENSGT00940000157281.v #20	ENSGT00950000182859.A.a.b.b.d.c.a.b.a.a #21	ENSGT00950000182859.A.a.b.b.c.b #21	ENSGT00950000182859.A.a.a.a.e ##21	ENSGT00940000155650.a.b.c.b #22	ENSGT00940000161042.c #25	ENSGT00940000157770.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.a.b	ENSGT00940000156866.b	ENSGT00390000007125.b.a	ENSGT00390000014412.k.a	ENSGT00390000005989.a.b.a.b.a	ENSGT00940000156198.c.b.d	ENSGT00940000154998.a.a.w	ENSGT00390000000483.a.a.d	ENSGT00940000164716.B.a	ENSGT00940000155857.f.b.c	ENSGT00940000160880.g	ENSGT00510000046929.b.c	ENSGT01000000221046
Chinook salmon	MODERN SPECIES	23	ENSOTSG00005039694	ADRA1B (ENSOTSG00005039695) #17	havcr1 (ENSOTSG00005039698)	timd4 (ENSOTSG00005039699)	ENSOTSG00005039704	ENSOTSG00005002717	fam53c (ENSOTSG00005002874)	slbp2 (ENSOTSG00005002884)	zmat2 (ENSOTSG00005002892)	ENSOTSG00005002896	foxi3a (ENSOTSG00005002913)	nhp2 (ENSOTSG00005002916)	grpel2 (ENSOTSG00005002918)	afap1l1b (ENSOTSG00005002926)	ENSOTSG00005002940	CLINT1 (ENSOTSG00005002962) #22	ENSOTSG00005002978 #25	TCERG1 (ENSOTSG00005002993)	ENSOTSG00005003266	CREBRF (ENSOTSG00005003593)	BNIP1 (ENSOTSG00005003594)	STC2 (ENSOTSG00005003596)	bod1 (ENSOTSG00005003597)	msx2b (ENSOTSG00005003600)	drd1b (ENSOTSG00005003602)	pou4f3 (ENSOTSG00005003603)	RBM27 (ENSOTSG00005003606)	ENSOTSG00005003611	ENSOTSG00005003614	GRXCR2 (ENSOTSG00005003615)	kctd16b (ENSOTSG00005003616)
Coho salmon	MODERN SPECIES	20	nhp2 (ENSOKIG00005037534)	grpel2 (ENSOKIG00005037510)	afap1l1b (ENSOKIG00005037475)	ENSOKIG00005037461	ABLIM3 (ENSOKIG00005037308)	adrb2b (ENSOKIG00005037279)	ubtd2 (ENSOKIG00005037269)	ENSOKIG00005037259	ENSOKIG00005037227 #18	UBLCP1 (ENSOKIG00005037194) #19	RNF145 (ENSOKIG00005037114) #20	ENSOKIG00005037103	EBF1 (ENSOKIG00005037089) #21	EBF1 (ENSOKIG00005037083) #21	ENSOKIG00005037071 ##21	CLINT1 (ENSOKIG00005037005) #22	TCERG1 (ENSOKIG00005036688)	DLX6 (ENSOKIG00005036642)	ENSOKIG00005036438	ATP6V0E1 (ENSOKIG00005036389)	CREBRF (ENSOKIG00005036368)	BNIP1 (ENSOKIG00005036339)	STC2 (ENSOKIG00005036318)	bod1 (ENSOKIG00005036294)	CPEB4 (ENSOKIG00005035997)	nsg2 (ENSOKIG00005035972)	msx2b (ENSOKIG00005035967)	drd1b (ENSOKIG00005035960)	POU4F3 (ENSOKIG00005035942)	RBM27 (ENSOKIG00005035894)	ENSOKIG00005035864
Rainbow trout	MODERN SPECIES	1	ENSOMYG00000018338	foxi3a (ENSOMYG00000018364)	nhp2 (ENSOMYG00000018371)	grpel2 (ENSOMYG00000018397)	afap1l1b (ENSOMYG00000018410)	ABLIM3 (ENSOMYG00000065012)	adrb2b (ENSOMYG00000012647)	ubtd2 (ENSOMYG00000064167)	ENSOMYG00000068494	IL12B (ENSOMYG00000017650) #18	UBLCP1 (ENSOMYG00000017671) #19	RNF145 (ENSOMYG00000017690) #20	EBF1 (ENSOMYG00000075841) #21	ENSOMYG00000075590	ENSOMYG00000068243	CLINT1 (ENSOMYG00000069962) #22	ENSOMYG00000030826	ENSOMYG00000031043	ATP6V0E1 (ENSOMYG00000052848)	CREBRF (ENSOMYG00000031280)	BNIP1 (ENSOMYG00000031293)	STC2 (ENSOMYG00000031300)	ENSOMYG00000071622	bod1 (ENSOMYG00000031304)	CPEB4 (ENSOMYG00000031322)	nsg2 (ENSOMYG00000031369)	msx2b (ENSOMYG00000066549)	ENSOMYG00000052445	ENSOMYG00000070641	drd1b (ENSOMYG00000031391)	POU4F3 (ENSOMYG00000031397)
Northern pike	MODERN SPECIES	6	fam53c (ENSELUG00000021751)	slbp2 (ENSELUG00000021799)	zmat2 (ENSELUG00000021857)	ENSELUG00000021946	foxi3a (ENSELUG00000021971)	nhp2 (ENSELUG00000021981)	grpel2 (ENSELUG00000022001)	afap1l1b (ENSELUG00000022026)	ablim3 (ENSELUG00000022091)	adrb2b (ENSELUG00000022105)	ubtd2 (ENSELUG00000022138)	IL12B (ENSELUG00000022176) #18	ublcp1 (ENSELUG00000022212) #19	rnf145b (ENSELUG00000022258) #20	EBF1 (ENSELUG00000022383) #21	CLINT1 (ENSELUG00000022458) #22	ENSELUG00000022471 #25	TCERG1 (ENSELUG00000022544)	PPP2R2B (ENSELUG00000022606)	PCYOX1L (ENSELUG00000022655)	ATP6V0E1 (ENSELUG00000025753)	CREBRF (ENSELUG00000022756)	BNIP1 (ENSELUG00000028774)	STC2 (ENSELUG00000029462)	bod1 (ENSELUG00000022818)	CPEB4 (ENSELUG00000033579)	CPEB4 (ENSELUG00000022898)	CPEB4 (ENSELUG00000030722)	nsg2 (ENSELUG00000022939)	ENSELUG00000032902	msx2b (ENSELUG00000034610)
Protacanthopterygii	ANCESTRAL SPECIES	19	ENSGT00940000165206.d	ENSGT00940000158334	ENSGT00940000156901.A.d	ENSGT00940000168499	ENSGT00940000153203.A.a	ENSGT00940000158603	ENSGT00940000164576.b.a.a	ENSGT00940000166663	ENSGT00950000183067.a.b.a.d	ENSGT00950000182850.a.b.a.b.a.b	ENSGT00530000063812.B	ENSGT00940000159538.g.a	ENSGT00390000007501	ENSGT00390000012630.A.b #18	ENSGT00950000182859.A.a.b.b.d.c.a #21	ENSGT00940000155650.a.b.d #22	ENSGT00940000155650.a.a #22	ENSGT00390000012944 #23	ENSGT00390000011705 #24	ENSGT00940000159624 #26	ENSGT01030000234518.A.a.b	ENSGT00950000182864.a.b.b.a.b.a.b.b	ENSGT00390000014165	ENSGT00940000156866	ENSGT00390000014412.l	ENSGT00940000158996	ENSGT00390000005989.a.b.a.a	ENSGT00940000154998.a.b	ENSGT00940000164716.A	ENSGT00940000155857.f.a	ENSGT00940000165959
Salmoninae	ANCESTRAL SPECIES																	ENSGT00940000155650.a.b.d #22
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155650.a.b.d.a #22
Salmo	ANCESTRAL SPECIES																	ENSGT00940000155650.a.b.d.a #22
River trout	MODERN SPECIES	4	rmnd5b (ENSSTUG00000045442)	ENSSTUG00000045520	foxi3b (ENSSTUG00000045541)	ENSSTUG00000045548	afap1l1a (ENSSTUG00000045558)	ABLIM3 (ENSSTUG00000045596)	SH3TC2 (ENSSTUG00000045662)	ENSSTUG00000045920	adrb2a (ENSSTUG00000045922)	ENSSTUG00000045926	il12ba (ENSSTUG00000045936) #18	ENSSTUG00000045947	ENSSTUG00000045961 #21	ENSSTUG00000046030	ENSSTUG00000046032	ENSSTUG00000046037 #22	ENSSTUG00000046049 #26	GPR151 (ENSSTUG00000046133)	ENSSTUG00000046137	rpl26 (ENSSTUG00000046141)	atp6v0e1 (ENSSTUG00000046147)	BNIP1 (ENSSTUG00000046155)	nkx2.5 (ENSSTUG00000046160)	STC2 (ENSSTUG00000046164)	ENSSTUG00000046170	cpeb4a (ENSSTUG00000046175)	msx2a (ENSSTUG00000046254)	DRD1 (ENSSTUG00000046258)	nek12 (ENSSTUG00000046262)	nxt2 (ENSSTUG00000001036)	psmd10 (ENSSTUG00000001508)
Oncorhynchus	ANCESTRAL SPECIES	332																ENSGT00940000155650.a.b.d.a #22	ENSGT00390000012944.j #23	ENSGT00390000011705.v.b #24
Oncorhynchus_a	ANCESTRAL SPECIES	457																ENSGT00940000155650.a.b.d.a #22	ENSGT00390000012944.j #23	ENSGT00390000011705.v.b #24
Chinook salmon	MODERN SPECIES	563																ENSOTSG00005017693 #22	ENSOTSG00005017695 #23	thg1l (ENSOTSG00005017696) #24
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT00940000155650.a.b.d.b #22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT00940000155650.a.b.d.b #22
Oncorhynchus_a	ANCESTRAL SPECIES	313											ENSGT00530000063812.B.c.b	ENSGT00940000159538.g.a.f	ENSGT00390000007501	ENSGT00390000012630.A.b.d #18	ENSGT00950000182859.A.a.b.b.d.c.a.a.b #21	ENSGT00940000155650.a.b.d.b #22
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	13	STC2 (ENSOTSG00005038121)	ENSOTSG00005038125	msx2a (ENSOTSG00005038163)	DRD1 (ENSOTSG00005038164)	TMEM131 (ENSOTSG00005038165)	UBE3A (ENSOTSG00005038170)	ENSOTSG00005038686	ENSOTSG00005038687	nudt15 (ENSOTSG00005038688)	cpo (ENSOTSG00005038691)	cpo (ENSOTSG00005038693)	ENSOTSG00005038700	ENSOTSG00005038706	il12ba (ENSOTSG00005038709) #18	ENSOTSG00005038715 #21	ENSOTSG00005038722 #22	cpo (ENSOTSG00005038725)	nudt15 (ENSOTSG00005038729)	cpo (ENSOTSG00005038732)	ENSOTSG00005038737	CNGA3 (ENSOTSG00005039429)	TMEM131 (ENSOTSG00005039430)	kctd12b (ENSOTSG00005002577)	znf711 (ENSOTSG00005002655)	zgc:66447 (ENSOTSG00005002697)	tmsb1 (ENSOTSG00005002814)	SLC25A53 (ENSOTSG00005002816)	prps1b (ENSOTSG00005002824)	FRMPD3 (ENSOTSG00005002826)	nsdhl (ENSOTSG00005002829)	CETN1 (ENSOTSG00005002837)
Chinook salmon	MODERN SPECIES	106									ENSOTSG00005039007 #18	adrb2a (ENSOTSG00005039085)	ENSOTSG00005039087	ENSOTSG00005039096	ENSOTSG00005039098	il12ba (ENSOTSG00005039100) #18	ENSOTSG00005039103 #21	ENSOTSG00005039106 #22	cpo (ENSOTSG00005039108)	ENSOTSG00005039122	TMC7 (ENSOTSG00005043557)	ENSOTSG00005043559	ENSOTSG00005043560	gsg1l (ENSOTSG00005043773)	dtd1 (ENSOTSG00005043789)	SLK (ENSOTSG00005043800)	stn1 (ENSOTSG00005044154)	SH3PXD2A (ENSOTSG00005044156)	neurl1aa (ENSOTSG00005044159)	ENSOTSG00005044161
Acanthomorphata	ANCESTRAL SPECIES	10	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00940000155690.a	ENSGT00940000165264.a	ENSGT00530000063751.b.i
Cod	MODERN SPECIES	20	ENSGMOG00000010874	ENSGMOG00000010941	znrd2 (ENSGMOG00000033688)	arr3a (ENSGMOG00000010969)	MCF2 (ENSGMOG00000010978)	f9b (ENSGMOG00000022348)	fgf13b (ENSGMOG00000011012)	ENSGMOG00000011023	ENSGMOG00000011042	ENSGMOG00000011065	ENSGMOG00000032640	ubtd2 (ENSGMOG00000023849)	ENSGMOG00000011082 #18	ublcp1 (ENSGMOG00000011094) #19	RNF145 (ENSGMOG00000011104) #20	ENSGMOG00000023755 #22	ENSGMOG00000036187 #25	ENSGMOG00000016505	ENSGMOG00000016493	CREBRF (ENSGMOG00000025090)	ENSGMOG00000016467	STC2 (ENSGMOG00000024586)	bod1 (ENSGMOG00000016460)	ENSGMOG00000016444	tpst1l (ENSGMOG00000012504)	ENSGMOG00000034946	crcp (ENSGMOG00000011351)	asl (ENSGMOG00000011337)	ENSGMOG00000025652	ca4c (ENSGMOG00000006009)	aldh3a2b (ENSGMOG00000006765)
Euacanthomorphacea	ANCESTRAL SPECIES	20	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k	ENSGT00950000183122.B	ENSGT00940000155690.a	ENSGT00940000165264.a
Pinecone sodierfish	MODERN SPECIES	5	FAM89B (ENSMMDG00005014550)	znrd2 (ENSMMDG00005014553)	ENSMMDG00005014557	arr3a (ENSMMDG00005014566)	MCF2 (ENSMMDG00005014684)	f9b (ENSMMDG00005014696)	fgf13b (ENSMMDG00005014772)	afap1l1b (ENSMMDG00005014778)	ablim3 (ENSMMDG00005014796)	ENSMMDG00005014873	ubtd2 (ENSMMDG00005014952)	ENSMMDG00005014953 #18	ublcp1 (ENSMMDG00005014958) #19	RNF145 (ENSMMDG00005014960) #20	EBF1 (ENSMMDG00005015002) #21	CLINT1 (ENSMMDG00005015146) #22	ENSMMDG00005015150 #25	TCERG1 (ENSMMDG00005015160)	PCYOX1L (ENSMMDG00005016352)	CREBRF (ENSMMDG00005016358)	BNIP1 (ENSMMDG00005016363)	STC2 (ENSMMDG00005016367)	bod1 (ENSMMDG00005016372)	htatsf1 (ENSMMDG00005016373)	tmtops3b (ENSMMDG00005016399)	tpst1l (ENSMMDG00005016405)	crcp (ENSMMDG00005016406)	ENSMMDG00005016407	asl (ENSMMDG00005016462)	ca4c (ENSMMDG00005018526)	ca4c (ENSMMDG00005018528)
Percomorphaceae	ANCESTRAL SPECIES	9	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k	ENSGT00950000183122.B	ENSGT00940000155690.a	ENSGT00940000165264.a
Tiger tail seahorse	MODERN SPECIES	469	mrps17 (ENSHCOG00000009491)	LIMK1 (ENSHCOG00000009459)	septin4a (ENSHCOG00000009438)	pafah1b1b (ENSHCOG00000009354)	ENSHCOG00000009269	cryba1b (ENSHCOG00000009262)	SLC13A2 (ENSHCOG00000009251)	vtnb (ENSHCOG00000009223)	aldh3a2b (ENSHCOG00000009215)	ca4c (ENSHCOG00000009198)	asl (ENSHCOG00000009141)	crcp (ENSHCOG00000009105)	tpst1l (ENSHCOG00000009088)	htatsf1 (ENSHCOG00000009056)	bod1 (ENSHCOG00000009017)	ENSHCOG00000008928 #22	TCERG1 (ENSHCOG00000008909)	ENSHCOG00000008841	PCYOX1L (ENSHCOG00000008828)	ENSHCOG00000008816
Percomorphaceae_B	ANCESTRAL SPECIES	10	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Percomorphaceae_C	ANCESTRAL SPECIES	10	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	16	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Anabantaria	DUPLICATION
Anabantaria	ANCESTRAL SPECIES	13	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT00940000155650.a.b.f #22	ENSGT00940000161042 #25	ENSGT00940000155650.a.b.e #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT00940000155650.a.b.f #22	ENSGT00940000161042 #25	ENSGT00940000155650.a.b.e #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Siamese fighting fish	MODERN SPECIES	5	trarg1b (ENSBSLG00000010449)	ENSBSLG00000010374	cryba1b (ENSBSLG00000010330)	unc119b (ENSBSLG00000010320)	slc13a2 (ENSBSLG00000010202)	vtnb (ENSBSLG00000010193)	ENSBSLG00000010187	aldh3a2b (ENSBSLG00000010142)	ca4c (ENSBSLG00000010135)	asl (ENSBSLG00000008894)	ENSBSLG00000008881	crcp (ENSBSLG00000008874)	TCERG1 (ENSBSLG00000008868)	CRCP (ENSBSLG00000008846)	tpst1l (ENSBSLG00000008838)	ENSBSLG00000008831 #22	CLINT1 (ENSBSLG00000008808) #22	TCERG1 (ENSBSLG00000008766)	ENSBSLG00000008764	ENSBSLG00000008751	ENSBSLG00000008743	PCYOX1L (ENSBSLG00000008733)	CREBRF (ENSBSLG00000008717)	BNIP1 (ENSBSLG00000008712)	STC2 (ENSBSLG00000008694)	STC2 (ENSBSLG00000008679)	bod1 (ENSBSLG00000008667)	ENSBSLG00000008662	htatsf1 (ENSBSLG00000008470)	EBF1 (ENSBSLG00000007687) #21	RNF145 (ENSBSLG00000007668) #20
Anabantaria	ANCESTRAL SPECIES	13	ENSGT01010000222313.B.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT00940000155650.a.b.f #22	ENSGT00940000161042 #25	ENSGT00940000155650.a.b.e #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h
Anabantoidei	ANCESTRAL SPECIES	12	ENSGT00940000166421	ENSGT00940000176146	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT00940000155650.a.b.f #22	ENSGT00940000161042 #25	ENSGT00940000155650.a.b.e #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h
Climbing perch	MODERN SPECIES	5	ENSATEG00000008174	ENSATEG00000008217	ENSATEG00000008277	ENSATEG00000008290	cryba1b (ENSATEG00000008334)	unc119b (ENSATEG00000008366)	slc13a2 (ENSATEG00000008383)	vtnb (ENSATEG00000008485)	ENSATEG00000025323	aldh3a2b (ENSATEG00000008559)	ca4c (ENSATEG00000008574)	asl (ENSATEG00000008589)	ENSATEG00000008657	crcp (ENSATEG00000008670)	tpst1l (ENSATEG00000008696)	ENSATEG00000008713 #22	ENSATEG00000026150 #25	ENSATEG00000008799	ENSATEG00000008819	CREBRF (ENSATEG00000008829)	ENSATEG00000025959	STC2 (ENSATEG00000008869)	bod1 (ENSATEG00000028746)	ENSATEG00000008903	EBF1 (ENSATEG00000008930) #21	RNF145 (ENSATEG00000009011) #20	ublcp1 (ENSATEG00000009067) #19	IL12B (ENSATEG00000009107) #18	ubtd2 (ENSATEG00000009133)	ENSATEG00000026283	ENSATEG00000009150
Siamese fighting fish	MODERN SPECIES	5	ENSBSLG00000010374	cryba1b (ENSBSLG00000010330)	unc119b (ENSBSLG00000010320)	slc13a2 (ENSBSLG00000010202)	vtnb (ENSBSLG00000010193)	ENSBSLG00000010187	aldh3a2b (ENSBSLG00000010142)	ca4c (ENSBSLG00000010135)	asl (ENSBSLG00000008894)	ENSBSLG00000008881	crcp (ENSBSLG00000008874)	TCERG1 (ENSBSLG00000008868)	CRCP (ENSBSLG00000008846)	tpst1l (ENSBSLG00000008838)	ENSBSLG00000008831 #22	CLINT1 (ENSBSLG00000008808) #22	TCERG1 (ENSBSLG00000008766)	ENSBSLG00000008764	ENSBSLG00000008751	ENSBSLG00000008743	PCYOX1L (ENSBSLG00000008733)	CREBRF (ENSBSLG00000008717)	BNIP1 (ENSBSLG00000008712)	STC2 (ENSBSLG00000008694)	STC2 (ENSBSLG00000008679)	bod1 (ENSBSLG00000008667)	ENSBSLG00000008662	htatsf1 (ENSBSLG00000008470)	EBF1 (ENSBSLG00000007687) #21	RNF145 (ENSBSLG00000007668) #20	ublcp1 (ENSBSLG00000007663) #19
Zig-zag eel	MODERN SPECIES	5	ENSMAMG00000021059	trarg1b (ENSMAMG00000021135)	ENSMAMG00000026610	cryba1b (ENSMAMG00000021138)	unc119b (ENSMAMG00000025936)	slc13a2 (ENSMAMG00000021146)	vtnb (ENSMAMG00000021150)	ENSMAMG00000021153	aldh3a2b (ENSMAMG00000021156)	ca4c (ENSMAMG00000021162)	asl (ENSMAMG00000021163)	ENSMAMG00000028256	ENSMAMG00000021167	crcp (ENSMAMG00000021168)	tpst1l (ENSMAMG00000021169)	ENSMAMG00000021172 #22	ENSMAMG00000021183	ENSMAMG00000021200	CREBRF (ENSMAMG00000021202)	ENSMAMG00000021210	STC2 (ENSMAMG00000028227)	bod1 (ENSMAMG00000021222)	ENSMAMG00000021225	EBF1 (ENSMAMG00000021229) #21	RNF145 (ENSMAMG00000021243) #20	ublcp1 (ENSMAMG00000021251) #19	ENSMAMG00000021258 #18	ubtd2 (ENSMAMG00000021262)	ENSMAMG00000028249	ENSMAMG00000021268	ENSMAMG00000021277
Carangaria	ANCESTRAL SPECIES	16	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Carangaria_A	ANCESTRAL SPECIES	8	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Seriola	ANCESTRAL SPECIES	2	ENSGT01010000222313.B.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Greater amberjack	MODERN SPECIES	15	ENSSDUG00000019369	ENSSDUG00000019374	trarg1b (ENSSDUG00000019398)	ENSSDUG00000019411	cryba1b (ENSSDUG00000019449)	unc119b (ENSSDUG00000019459)	slc13a2 (ENSSDUG00000019475)	vtnb (ENSSDUG00000019507)	ENSSDUG00000019523	aldh3a2b (ENSSDUG00000019529)	ca4c (ENSSDUG00000019547)	asl (ENSSDUG00000019562)	ENSSDUG00000019615	crcp (ENSSDUG00000019628)	tpst1l (ENSSDUG00000019645)	CLINT1 (ENSSDUG00000019673) #22	ENSSDUG00000019725 #25	TCERG1 (ENSSDUG00000019753)	PCYOX1L (ENSSDUG00000019862)	CREBRF (ENSSDUG00000019886)	BNIP1 (ENSSDUG00000019948)	STC2 (ENSSDUG00000019965)	ENSSDUG00000019984	htatsf1 (ENSSDUG00000020002)	EBF1 (ENSSDUG00000020020) #21	RNF145 (ENSSDUG00000020056) #20	ublcp1 (ENSSDUG00000020092) #19	IL12B (ENSSDUG00000020130) #18	ubtd2 (ENSSDUG00000020150)	ADRB2 (ENSSDUG00000020160)	ablim3 (ENSSDUG00000020212)
Yellowtail amberjack	MODERN SPECIES	3277	ENSSLDG00000015959	ENSSLDG00000015988	trarg1b (ENSSLDG00000016039)	ENSSLDG00000016061	cryba1b (ENSSLDG00000016096)	unc119b (ENSSLDG00000016119)	slc13a2 (ENSSLDG00000016155)	vtnb (ENSSLDG00000016199)	ENSSLDG00000016231	aldh3a2b (ENSSLDG00000016247)	ca4c (ENSSLDG00000016273)	asl (ENSSLDG00000016302)	ENSSLDG00000016334	crcp (ENSSLDG00000016367)	tpst1l (ENSSLDG00000016395)	CLINT1 (ENSSLDG00000016476) #22	ENSSLDG00000016721 #25	TCERG1 (ENSSLDG00000016740)	PCYOX1L (ENSSLDG00000016773)	CREBRF (ENSSLDG00000016793)	BNIP1 (ENSSLDG00000016835)	STC2 (ENSSLDG00000016853)	htatsf1 (ENSSLDG00000016880)
Barramundi perch	MODERN SPECIES	94	FAM89B (ENSLCAG00010020520)	znrd2 (ENSLCAG00010020521)	arr3a (ENSLCAG00010020523)	MCF2 (ENSLCAG00010020530)	f9b (ENSLCAG00010020548)	fgf13b (ENSLCAG00010020552)	afap1l1b (ENSLCAG00010020555)	ablim3 (ENSLCAG00010020559)	ENSLCAG00010020565	ADRB2 (ENSLCAG00010020568)	ubtd2 (ENSLCAG00010020575)	IL12B (ENSLCAG00010020580) #18	ublcp1 (ENSLCAG00010020583) #19	RNF145 (ENSLCAG00010020593) #20	EBF1 (ENSLCAG00010020655) #21	CLINT1 (ENSLCAG00010020851) #22	ENSLCAG00010020854 #25	TCERG1 (ENSLCAG00010020910)	PCYOX1L (ENSLCAG00010021088)	CREBRF (ENSLCAG00010021095)	BNIP1 (ENSLCAG00010021103)	STC2 (ENSLCAG00010021108)	bod1 (ENSLCAG00010021113)	htatsf1 (ENSLCAG00010021118)	tmtops3b (ENSLCAG00010021127)	tpst1l (ENSLCAG00010021131)	crcp (ENSLCAG00010021133)	ENSLCAG00010021134	asl (ENSLCAG00010021164)	ca4c (ENSLCAG00010021202)	aldh3a2b (ENSLCAG00010021204)
Pleuronectoidei	ANCESTRAL SPECIES	44	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00390000009902
Tongue sole	MODERN SPECIES	10	pdha1a (ENSCSEG00000018951)	ENSCSEG00000018928	ENSCSEG00000018912	lipia (ENSCSEG00000018900)	pcyt1bb (ENSCSEG00000018888)	trarg1b (ENSCSEG00000018884)	cryba1b (ENSCSEG00000018863)	vtnb (ENSCSEG00000018842)	ENSCSEG00000018838	aldh3a2b (ENSCSEG00000018826)	ca4c (ENSCSEG00000018817)	crcp (ENSCSEG00000018814)	asl (ENSCSEG00000018789)	tpst1l (ENSCSEG00000018769)	ENSCSEG00000018767	ENSCSEG00000018755 #22	TCERG1 (ENSCSEG00000018712)	PCYOX1L (ENSCSEG00000018708)	CREBRF (ENSCSEG00000018697)	BNIP1 (ENSCSEG00000018692)	STC2 (ENSCSEG00000018683)	htatsf1 (ENSCSEG00000018667)	gria3a (ENSCSEG00000018622)	nlgn3b (ENSCSEG00000018608)	plp1b (ENSCSEG00000018593)	cwc15 (ENSCSEG00000018582)	mtmr2 (ENSCSEG00000018496)	fam76b (ENSCSEG00000018483)	taf1 (ENSCSEG00000018452)	slc6a7 (ENSCSEG00000018439)	ENSCSEG00000018433
Turbot	MODERN SPECIES	16	ENSSMAG00000019454	trarg1b (ENSSMAG00000019449)	ENSSMAG00000019439	cryba1b (ENSSMAG00000019431)	unc119b (ENSSMAG00000018172)	slc13a2 (ENSSMAG00000019400)	ENSSMAG00000031645	vtnb (ENSSMAG00000019395)	aldh3a2b (ENSSMAG00000019299)	ca4c (ENSSMAG00000019238)	asl (ENSSMAG00000019174)	ENSSMAG00000019059	crcp (ENSSMAG00000029191)	tpst1l (ENSSMAG00000018987)	ENSSMAG00000018972	ENSSMAG00000018917 #22	ENSSMAG00000018840	ENSSMAG00000018830	ENSSMAG00000018819	SUPT20H (ENSSMAG00000018788)	ugt5d1 (ENSSMAG00000018780)	POSTN (ENSSMAG00000018677)	trpc4a (ENSSMAG00000018619)	ufm1 (ENSSMAG00000036546)	frem2a (ENSSMAG00000018565)	trim47 (ENSSMAG00000018552)	trim3b (ENSSMAG00000018503)	fhdc3 (ENSSMAG00000018494)	arfip2b (ENSSMAG00000018416)	ENSSMAG00000018355	ENSSMAG00000018345
Eupercaria	ANCESTRAL SPECIES	17	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Tetraodontidae	ANCESTRAL SPECIES	6	ENSGT00940000160421.j	ENSGT00940000163922.a.e	ENSGT00940000166536	ENSGT00510000047446	ENSGT00940000158885	ENSGT00940000159212.b	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.b.a.a	ENSGT00530000063975.j.b	ENSGT01020000230354.B.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00950000183122.B	ENSGT00940000155690.a	ENSGT00940000165264.a	ENSGT00920000149180.a	ENSGT00530000063751.b.i
Fugu	MODERN SPECIES	6	supt6h (ENSTRUG00000014399)	sdf2 (ENSTRUG00000014371)	ENSTRUG00000014343	cbln17 (ENSTRUG00000030847)	cbln17 (ENSTRUG00000030103)	cbln17 (ENSTRUG00000014339)	cbln17 (ENSTRUG00000030547)	mettl27 (ENSTRUG00000014311)	nf2b (ENSTRUG00000014195)	ADRB2 (ENSTRUG00000014131)	ubtd2 (ENSTRUG00000020332)	ENSTRUG00000014071 #18	ublcp1 (ENSTRUG00000014010) #19	RNF145 (ENSTRUG00000013909) #20	EBF1 (ENSTRUG00000013805) #21	CLINT1 (ENSTRUG00000013748) #22	TCERG1 (ENSTRUG00000013639)	PCYOX1L (ENSTRUG00000013590)	CREBRF (ENSTRUG00000013514)	BNIP1 (ENSTRUG00000027694)	STC2 (ENSTRUG00000013474)	htatsf1 (ENSTRUG00000013383)	tmtops3b (ENSTRUG00000013247)	tpst1l (ENSTRUG00000013179)	crcp (ENSTRUG00000025161)	asl (ENSTRUG00000012953)	ca4c (ENSTRUG00000012774)	aldh3a2b (ENSTRUG00000012525)	ENSTRUG00000031704	vtnb (ENSTRUG00000012463)	slc13a2 (ENSTRUG00000012291)
Tetraodon	MODERN SPECIES	22	slc47a1 (ENSTNIG00000016159)	ENSTNIG00000016158	supt6h (ENSTNIG00000016157)	sdf2 (ENSTNIG00000000130)	ENSTNIG00000016156	ENSTNIG00000000974	ENSTNIG00000016155	mettl27 (ENSTNIG00000016154)	nf2b (ENSTNIG00000016153)	ADRB2 (ENSTNIG00000016152)	ubtd2 (ENSTNIG00000016151)	IL12B (ENSTNIG00000001795) #18	ublcp1 (ENSTNIG00000016150) #19	RNF145 (ENSTNIG00000016149) #20	EBF1 (ENSTNIG00000016148) #21	CLINT1 (ENSTNIG00000016147) #22	TCERG1 (ENSTNIG00000016146)	ENSTNIG00000016145	CREBRF (ENSTNIG00000016144)	BNIP1 (ENSTNIG00000016143)	STC2 (ENSTNIG00000016142)	bod1 (ENSTNIG00000016141)	htatsf1 (ENSTNIG00000016140)	tmtops3b (ENSTNIG00000016139)	tpst1l (ENSTNIG00000016138)	crcp (ENSTNIG00000016137)	asl (ENSTNIG00000016136)	ca4c (ENSTNIG00000016135)	aldh3a2b (ENSTNIG00000016134)	vtnb (ENSTNIG00000016133)	slc13a2 (ENSTNIG00000016132)
Eupecaria_A	ANCESTRAL SPECIES	17	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Ballan wrasse	MODERN SPECIES	79	ENSLBEG00000000387	ENSLBEG00000000397	ENSLBEG00000000412	trarg1b (ENSLBEG00000000442)	cryba1b (ENSLBEG00000000453)	unc119b (ENSLBEG00000000462)	slc13a2 (ENSLBEG00000000488)	vtnb (ENSLBEG00000000550)	ENSLBEG00000000620	aldh3a2b (ENSLBEG00000000657)	ca4c (ENSLBEG00000000709)	asl (ENSLBEG00000000732)	ENSLBEG00000000790	crcp (ENSLBEG00000000804)	tpst1l (ENSLBEG00000000840)	ENSLBEG00000000880 #22	TCERG1 (ENSLBEG00000000954)	PCYOX1L (ENSLBEG00000000989)	CREBRF (ENSLBEG00000001041)	BNIP1 (ENSLBEG00000001098)	ENSLBEG00000001137	htatsf1 (ENSLBEG00000001154)	EBF1 (ENSLBEG00000001189) #21	RNF145 (ENSLBEG00000001256) #20	ublcp1 (ENSLBEG00000001310) #19	ENSLBEG00000001365 #18	ubtd2 (ENSLBEG00000001406)	ADRB2 (ENSLBEG00000001430)	ENSLBEG00000001592
Eupecaria_B	ANCESTRAL SPECIES	17	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Eupecaria_C	ANCESTRAL SPECIES	15	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	12	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000182850.a.b.a.b.b
European seabass	MODERN SPECIES	4	ENSDLAG00005025406	trarg1b (ENSDLAG00005032845)	ENSDLAG00005025411	ENSDLAG00005031977	cryba1b (ENSDLAG00005000094)	unc119b (ENSDLAG00005027168)	slc13a2 (ENSDLAG00005000142)	vtnb (ENSDLAG00005000173)	ENSDLAG00005000189	aldh3a2b (ENSDLAG00005000229)	ca4c (ENSDLAG00005000273)	ENSDLAG00005000330	ENSDLAG00005000684	tpst1l (ENSDLAG00005000690)	ENSDLAG00005000699	ENSDLAG00005000717 #22	ENSDLAG00005000723 #25	ENSDLAG00005000752	ENSDLAG00005031176	ENSDLAG00005034378	BNIP1 (ENSDLAG00005028746)	ENSDLAG00005029702	ENSDLAG00005000984	EBF1 (ENSDLAG00005001006) #21	RNF145 (ENSDLAG00005001084) #20	ublcp1 (ENSDLAG00005001095) #19	IL12B (ENSDLAG00005001099) #18	ubtd2 (ENSDLAG00005034075)	ENSDLAG00005001112	ENSDLAG00005001118	ENSDLAG00005001131
Large yellow croaker	MODERN SPECIES	493									ubtd2 (ENSLCRG00005012927)	IL12B (ENSLCRG00005012929) #18	ublcp1 (ENSLCRG00005012930) #19	ENSLCRG00005012932	RNF145 (ENSLCRG00005012936) #20	EBF1 (ENSLCRG00005012955) #21	ENSLCRG00005013046	CLINT1 (ENSLCRG00005013049) #22	TCERG1 (ENSLCRG00005013055)	CREBRF (ENSLCRG00005013069)	BNIP1 (ENSLCRG00005013071)	STC2 (ENSLCRG00005013074)	bod1 (ENSLCRG00005013076)	htatsf1 (ENSLCRG00005013078)	tmtops3b (ENSLCRG00005013082)	tpst1l (ENSLCRG00005013083)	crcp (ENSLCRG00005013084)	asl (ENSLCRG00005013095)	ca4c (ENSLCRG00005014002)	aldh3a2b (ENSLCRG00005014004)	ENSLCRG00005014014	vtnb (ENSLCRG00005014016)	slc13a2 (ENSLCRG00005014019)
Gilthead seabream	MODERN SPECIES	4	FAM89B (ENSSAUG00010011372)	znrd2 (ENSSAUG00010011373)	arr3a (ENSSAUG00010011383)	ENSSAUG00010011795	fgf13b (ENSSAUG00010011799)	afap1l1b (ENSSAUG00010011804)	ablim3 (ENSSAUG00010011815)	ENSSAUG00010011821	ADRB2 (ENSSAUG00010011822)	ubtd2 (ENSSAUG00010011825)	IL12B (ENSSAUG00010011827) #18	ublcp1 (ENSSAUG00010011828) #19	RNF145 (ENSSAUG00010011831) #20	EBF1 (ENSSAUG00010011838) #21	crcp (ENSSAUG00010011882)	CLINT1 (ENSSAUG00010011892) #22	TCERG1 (ENSSAUG00010011896)	PCYOX1L (ENSSAUG00010011914)	CREBRF (ENSSAUG00010011917)	BNIP1 (ENSSAUG00010011920)	STC2 (ENSSAUG00010011922)	bod1 (ENSSAUG00010011927)	tmtops3b (ENSSAUG00010011929)	tpst1l (ENSSAUG00010011935)	ENSSAUG00010011937	ENSSAUG00010011938	asl (ENSSAUG00010011970)	ca4c (ENSSAUG00010014599)	aldh3a2b (ENSSAUG00010014626)	vtnb (ENSSAUG00010014735)	slc13a2 (ENSSAUG00010014740)
Perciformes	ANCESTRAL SPECIES	22	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Perciformes_a	ANCESTRAL SPECIES	20	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Channel bull blenny	MODERN SPECIES	5	trarg1b (ENSCGOG00000012320)	ENSCGOG00000012322	cryba1b (ENSCGOG00000012328)	unc119b (ENSCGOG00000012330)	slc13a2 (ENSCGOG00000012342)	vtnb (ENSCGOG00000012357)	ENSCGOG00000012363	aldh3a2b (ENSCGOG00000012368)	ca4c (ENSCGOG00000012705)	asl (ENSCGOG00000012738)	ENSCGOG00000014665	ENSCGOG00000014673	crcp (ENSCGOG00000014680)	tpst1l (ENSCGOG00000014692)	tmtops3b (ENSCGOG00000014693)	ENSCGOG00000014705 #22	ENSCGOG00000014707 #25	TCERG1 (ENSCGOG00000014714)	PCYOX1L (ENSCGOG00000014943)	CREBRF (ENSCGOG00000014949)	BNIP1 (ENSCGOG00000014957)	STC2 (ENSCGOG00000014964)	bod1 (ENSCGOG00000014976)	htatsf1 (ENSCGOG00000014980)	EBF1 (ENSCGOG00000001634) #21	RNF145 (ENSCGOG00000001840) #20	ublcp1 (ENSCGOG00000001909) #19	IL12B (ENSCGOG00000002018) #18	ubtd2 (ENSCGOG00000002024)	ADRB2 (ENSCGOG00000002027)	ablim3 (ENSCGOG00000002042)
Pike perch	MODERN SPECIES	54	ENSSLUG00000004174	trarg1b (ENSSLUG00000004164)	ENSSLUG00000004134	cryba1b (ENSSLUG00000004124)	unc119b (ENSSLUG00000004116)	vtnb (ENSSLUG00000004113)	slc13a2 (ENSSLUG00000004075)	ENSSLUG00000004059	aldh3a2b (ENSSLUG00000003757)	ca4c (ENSSLUG00000003667)	asl (ENSSLUG00000003375)	ENSSLUG00000003318	crcp (ENSSLUG00000003300)	tpst1l (ENSSLUG00000003289)	tmtops3b (ENSSLUG00000003282)	ENSSLUG00000002966 #22	ENSSLUG00000002914 #25	TCERG1 (ENSSLUG00000002376)	PCYOX1L (ENSSLUG00000002331)	CREBRF (ENSSLUG00000002328)	BNIP1 (ENSSLUG00000002323)	STC2 (ENSSLUG00000002300)	bod1 (ENSSLUG00000002291)	htatsf1 (ENSSLUG00000002251)	EBF1 (ENSSLUG00000002218) #21	RNF145 (ENSSLUG00000002193) #20	ublcp1 (ENSSLUG00000002180) #19	IL12B (ENSSLUG00000002170) #18	ubtd2 (ENSSLUG00000002159)	ADRB2 (ENSSLUG00000002154)	ablim3 (ENSSLUG00000002122)
Cottioidei	ANCESTRAL SPECIES	10	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Lumpfish	MODERN SPECIES	5	ca4c (ENSCLMG00005014281)	asl (ENSCLMG00005014284)	asl (ENSCLMG00005014755)	asl (ENSCLMG00005014758)	asl (ENSCLMG00005014760)	asl (ENSCLMG00005014763)	asl (ENSCLMG00005014764)	asl (ENSCLMG00005014766)	asl (ENSCLMG00005014768)	asl (ENSCLMG00005014769)	asl (ENSCLMG00005014770)	asl (ENSCLMG00005014878)	crcp (ENSCLMG00005014880)	tpst1l (ENSCLMG00005014883)	tmtops3b (ENSCLMG00005014888)	ENSCLMG00005014951 #22	TCERG1 (ENSCLMG00005014974)	PCYOX1L (ENSCLMG00005004338)	CREBRF (ENSCLMG00005004612)	BNIP1 (ENSCLMG00005004636)	STC2 (ENSCLMG00005004659)	bod1 (ENSCLMG00005004676)	htatsf1 (ENSCLMG00005004701)	EBF1 (ENSCLMG00005004801) #21	RNF145 (ENSCLMG00005004819) #20	ublcp1 (ENSCLMG00005004823) #19	IL12B (ENSCLMG00005004829) #18	ubtd2 (ENSCLMG00005004863)	ADRB2 (ENSCLMG00005004873)	ABLIM3 (ENSCLMG00005004981)	afap1l1b (ENSCLMG00005004996)
Stickleback	MODERN SPECIES	7	ENSGACG00000020480	ENSGACG00000020479	trarg1b (ENSGACG00000020478)	ENSGACG00000020477	cryba1b (ENSGACG00000020476)	unc119b (ENSGACG00000020475)	slc13a2 (ENSGACG00000020474)	vtnb (ENSGACG00000020473)	aldh3a2b (ENSGACG00000020472)	ca4c (ENSGACG00000020471)	asl (ENSGACG00000020470)	ENSGACG00000020469	crcp (ENSGACG00000020468)	tpst1l (ENSGACG00000020467)	tmtops3b (ENSGACG00000020466)	ENSGACG00000020465 #22	TCERG1 (ENSGACG00000020464)	PCYOX1L (ENSGACG00000020463)	CREBRF (ENSGACG00000020462)	BNIP1 (ENSGACG00000020461)	bod1 (ENSGACG00000020460)	htatsf1 (ENSGACG00000020459)	EBF1 (ENSGACG00000020458) #21	RNF145 (ENSGACG00000020457) #20	ublcp1 (ENSGACG00000020456) #19	IL12B (ENSGACG00000020455) #18	ubtd2 (ENSGACG00000020454)	ADRB2 (ENSGACG00000020453)	ablim3 (ENSGACG00000020452)	afap1l1b (ENSGACG00000020451)	fgf13b (ENSGACG00000020450)
Ovalentaria	ANCESTRAL SPECIES	11	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Atherinomorphae	ANCESTRAL SPECIES	14	ENSGT00940000175361	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Oryzias	ANCESTRAL SPECIES	14	ENSGT00940000166421	ENSGT00940000175361	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c	ENSGT00940000162313.b
Oryzias_b	ANCESTRAL SPECIES	13	ENSGT00950000183204.a.a.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c	ENSGT00940000162313.b
Javanese ricefish	MODERN SPECIES	5	FBXO40 (ENSOJAG00000004408)	ENSOJAG00000004422	trarg1b (ENSOJAG00000004502)	ENSOJAG00000004528	cryba1b (ENSOJAG00000004642)	unc119b (ENSOJAG00000004665)	slc13a2 (ENSOJAG00000004677)	vtnb (ENSOJAG00000004691)	aldh3a2b (ENSOJAG00000004769)	ca4c (ENSOJAG00000005180)	asl (ENSOJAG00000005648)	ENSOJAG00000005958	crcp (ENSOJAG00000005969)	tpst1l (ENSOJAG00000006013)	tmtops3b (ENSOJAG00000006034)	CLINT1 (ENSOJAG00000006155) #22	TCERG1 (ENSOJAG00000006210)	PCYOX1L (ENSOJAG00000006386)	CREBRF (ENSOJAG00000006413)	BNIP1 (ENSOJAG00000006433)	ENSOJAG00000006455	bod1 (ENSOJAG00000006467)	htatsf1 (ENSOJAG00000006497)	EBF1 (ENSOJAG00000006781) #21	RNF145 (ENSOJAG00000008356) #20	ublcp1 (ENSOJAG00000008495) #19	ENSOJAG00000008524 #18	ubtd2 (ENSOJAG00000008586)	ADRB2 (ENSOJAG00000008607)	ablim3 (ENSOJAG00000008739)	afap1l1b (ENSOJAG00000008773)
Indian medaka	MODERN SPECIES	4	FBXO40 (ENSOMEG00000008803)	FBXO40 (ENSOMEG00000008690)	ENSOMEG00000008508	trarg1b (ENSOMEG00000008307)	ENSOMEG00000008359	cryba1b (ENSOMEG00000008271)	unc119b (ENSOMEG00000008231)	slc13a2 (ENSOMEG00000008214)	vtnb (ENSOMEG00000008174)	aldh3a2b (ENSOMEG00000008149)	ca4c (ENSOMEG00000008122)	asl (ENSOMEG00000008092)	crcp (ENSOMEG00000008006)	tpst1l (ENSOMEG00000007967)	tmtops3b (ENSOMEG00000007938)	CLINT1 (ENSOMEG00000007904) #22	TCERG1 (ENSOMEG00000007795)	PCYOX1L (ENSOMEG00000007716)	CREBRF (ENSOMEG00000000190)	BNIP1 (ENSOMEG00000007608)	bod1 (ENSOMEG00000007588)	htatsf1 (ENSOMEG00000007564)	EBF1 (ENSOMEG00000007507) #21	RNF145 (ENSOMEG00000007416) #20	ublcp1 (ENSOMEG00000007357) #19	IL12B (ENSOMEG00000007298) #18	ubtd2 (ENSOMEG00000007255)	ADRB2 (ENSOMEG00000007249)	ablim3 (ENSOMEG00000007193)	afap1l1b (ENSOMEG00000007075)	fgf13b (ENSOMEG00000007025)
Oryzias_a	ANCESTRAL SPECIES	2	ENSGT00950000183204.a.a.b.a	ENSGT00940000166421	ENSGT00940000175361	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c	ENSGT00940000162313.b
Chinese medaka	MODERN SPECIES	423	ENSOSIG00000006759	ENSOSIG00000006760	ENSOSIG00000006762	trarg1b (ENSOSIG00000006766)	ENSOSIG00000006768	unc119b (ENSOSIG00000006786)	slc13a2 (ENSOSIG00000006787)	vtnb (ENSOSIG00000006788)	aldh3a2b (ENSOSIG00000006792)	ca4c (ENSOSIG00000007707)	asl (ENSOSIG00000007709)	ENSOSIG00000007720	crcp (ENSOSIG00000007723)	tpst1l (ENSOSIG00000007726)	tmtops3b (ENSOSIG00000007728)	CLINT1 (ENSOSIG00000007730) #22	TCERG1 (ENSOSIG00000007745)	PCYOX1L (ENSOSIG00000007768)	CREBRF (ENSOSIG00000007769)	BNIP1 (ENSOSIG00000007770)	bod1 (ENSOSIG00000007771)	htatsf1 (ENSOSIG00000007772)	EBF1 (ENSOSIG00000007782) #21	RNF145 (ENSOSIG00000008718) #20	ublcp1 (ENSOSIG00000008719) #19	IL12B (ENSOSIG00000008720) #18	ubtd2 (ENSOSIG00000008721)
Japanese Medaka HdrR	MODERN SPECIES	5	ENSORLG00000002610	ENSORLG00000002601	ENSORLG00000028658	trarg1b (ENSORLG00000024934)	ENSORLG00000002592	unc119b (ENSORLG00000002577)	slc13a2 (ENSORLG00000002566)	vtnb (ENSORLG00000002546)	aldh3a2b (ENSORLG00000002528)	ca4c (ENSORLG00000002507)	asl (ENSORLG00000002500)	ENSORLG00000002486	crcp (ENSORLG00000028784)	tpst1l (ENSORLG00000002471)	tmtops3b (ENSORLG00000023227)	CLINT1 (ENSORLG00000002460) #22	TCERG1 (ENSORLG00000002439)	PCYOX1L (ENSORLG00000002404)	CREBRF (ENSORLG00000002384)	BNIP1 (ENSORLG00000002369)	bod1 (ENSORLG00000025671)	htatsf1 (ENSORLG00000002356)	EBF1 (ENSORLG00000002342) #21	RNF145 (ENSORLG00000002282) #20	ublcp1 (ENSORLG00000002261) #19	IL12B (ENSORLG00000002238) #18	ubtd2 (ENSORLG00000025523)	ENSORLG00000002214	ENSORLG00000002194	afap1l1b (ENSORLG00000002101)	fgf13b (ENSORLG00000002061)
Cyprinodontiformes	ANCESTRAL SPECIES	11	ENSGT00940000175361	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Aplocheiloidei	ANCESTRAL SPECIES	35	ENSGT00950000183204.a.a.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Mangrove rivulus	MODERN SPECIES	58	ENSKMAG00000006883	trarg1b (ENSKMAG00000006937)	ENSKMAG00000006947	cryba1b (ENSKMAG00000006980)	unc119b (ENSKMAG00000006995)	slc13a2 (ENSKMAG00000007017)	vtnb (ENSKMAG00000007066)	ENSKMAG00000007105	aldh3a2b (ENSKMAG00000007144)	ENSKMAG00000007180	ca4c (ENSKMAG00000007194)	asl (ENSKMAG00000007224)	crcp (ENSKMAG00000007300)	tpst1l (ENSKMAG00000007322)	tmtops3b (ENSKMAG00000007352)	ENSKMAG00000007406 #22	ENSKMAG00000007423	TCERG1 (ENSKMAG00000007448)	PCYOX1L (ENSKMAG00000007492)	CREBRF (ENSKMAG00000007522)	BNIP1 (ENSKMAG00000007566)	STC2 (ENSKMAG00000007593)	bod1 (ENSKMAG00000007608)	htatsf1 (ENSKMAG00000007622)	EBF1 (ENSKMAG00000007667) #21	RNF145 (ENSKMAG00000007773) #20	ublcp1 (ENSKMAG00000007828) #19	IL12B (ENSKMAG00000007875) #18	ubtd2 (ENSKMAG00000007896)	ADRB2 (ENSKMAG00000007924)	ENSKMAG00000007935
Turquoise killifish	MODERN SPECIES	1620	ENSNFUG00015011329	GABRB2 (ENSNFUG00015011176) #7	GABRA6B (ENSNFUG00015011123)	GABRA1 (ENSNFUG00015010908)	GABRG2 (ENSNFUG00015010429)	ENSNFUG00015010399	CCNI2 (ENSNFUG00015010388)	septin8a (ENSNFUG00015009497)	ENSNFUG00015009435	SHROOM1 (ENSNFUG00015009428)	AFF4 (ENSNFUG00015009414)	ZCCHC10 (ENSNFUG00015009397)	ENSNFUG00015009391	crcp (ENSNFUG00015009376)	ENSNFUG00015009369	TPST1L (ENSNFUG00015009341) #22	TCERG1 (ENSNFUG00015008923)	PCYOX1L (ENSNFUG00015008860)	CREBRF (ENSNFUG00015008855)	BNIP1 (ENSNFUG00015008846)	CABZ01034707.1 (ENSNFUG00015008839)	BOD1 (ENSNFUG00015008836)	HTATSF1 (ENSNFUG00015008749)	EBF1 (ENSNFUG00015008709) #21	ENSNFUG00015008696	ENSNFUG00015008691	RNF145 (ENSNFUG00015008678) #20	UBLCP1 (ENSNFUG00015008670) #19	IL12BB (ENSNFUG00015008661) #18	UBTD2 (ENSNFUG00015008654)	ADRB2B (ENSNFUG00015008648)
Cyprinodontoidei	ANCESTRAL SPECIES	5	ENSGT00940000175361	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
NAME_4	ANCESTRAL SPECIES	12	ENSGT00940000175361	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Sheepshead minnow	MODERN SPECIES	206	ENSCVAG00000013144	ENSCVAG00000013155	trarg1b (ENSCVAG00000013160)	ENSCVAG00000013199	cryba1b (ENSCVAG00000013207)	unc119b (ENSCVAG00000013238)	slc13a2 (ENSCVAG00000013280)	vtnb (ENSCVAG00000013317)	ENSCVAG00000013330	aldh3a2b (ENSCVAG00000013400)	ca4c (ENSCVAG00000013509)	asl (ENSCVAG00000013595)	ENSCVAG00000013607	crcp (ENSCVAG00000013625)	tpst1l (ENSCVAG00000013647)	ENSCVAG00000013673 #22	TCERG1 (ENSCVAG00000013825)	PCYOX1L (ENSCVAG00000013866)	CREBRF (ENSCVAG00000013884)	BNIP1 (ENSCVAG00000013923)	STC2 (ENSCVAG00000013998)	bod1 (ENSCVAG00000014044)	htatsf1 (ENSCVAG00000014070)	EBF1 (ENSCVAG00000014113) #21	RNF145 (ENSCVAG00000014162) #20	ublcp1 (ENSCVAG00000014220) #19	IL12B (ENSCVAG00000014229) #18	ubtd2 (ENSCVAG00000014249)	ADRB2 (ENSCVAG00000014254)	ablim3 (ENSCVAG00000014437)	afap1l1b (ENSCVAG00000014453)
Mummichog	MODERN SPECIES	335	trarg1b (ENSFHEG00000021837)	ENSFHEG00000021810	cryba1b (ENSFHEG00000021797)	unc119b (ENSFHEG00000021780)	UNC119 (ENSFHEG00000021763)	slc13a2 (ENSFHEG00000021749)	vtnb (ENSFHEG00000021674)	ENSFHEG00000021444	aldh3a2b (ENSFHEG00000021425)	ca4c (ENSFHEG00000021417)	asl (ENSFHEG00000021389)	ENSFHEG00000021300	crcp (ENSFHEG00000021283)	tpst1l (ENSFHEG00000021253)	tmtops3b (ENSFHEG00000021206)	ENSFHEG00000020661 #22	ENSFHEG00000020619 #25	TCERG1 (ENSFHEG00000020600)	PCYOX1L (ENSFHEG00000020538)	CREBRF (ENSFHEG00000020480)	BNIP1 (ENSFHEG00000020463)	STC2 (ENSFHEG00000020427)	bod1 (ENSFHEG00000020290)	htatsf1 (ENSFHEG00000020286)
Poeciliinae	ANCESTRAL SPECIES	17	ENSGT00950000183204.a.a.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Platyfish	MODERN SPECIES	2	ENSXMAG00000007778	cryba1b (ENSXMAG00000007782)	unc119b (ENSXMAG00000028249)	slc13a2 (ENSXMAG00000022850)	slc13a2 (ENSXMAG00000007813)	ENSXMAG00000023079	vtnb (ENSXMAG00000007836)	aldh3a2b (ENSXMAG00000007838)	ca4c (ENSXMAG00000007859)	asl (ENSXMAG00000024917)	ENSXMAG00000007882	crcp (ENSXMAG00000022222)	tpst1l (ENSXMAG00000007886)	tmtops3b (ENSXMAG00000007891)	ENSXMAG00000027186	ENSXMAG00000000532 #22	TCERG1 (ENSXMAG00000000519)	PCYOX1L (ENSXMAG00000027639)	CREBRF (ENSXMAG00000000504)	BNIP1 (ENSXMAG00000000497)	STC2 (ENSXMAG00000000495)	bod1 (ENSXMAG00000022469)	htatsf1 (ENSXMAG00000000490)	EBF1 (ENSXMAG00000000489) #21	RNF145 (ENSXMAG00000000480) #20	ublcp1 (ENSXMAG00000025933) #19	IL12B (ENSXMAG00000000474) #18	ubtd2 (ENSXMAG00000026332)	ADRB2 (ENSXMAG00000000470)	ablim3 (ENSXMAG00000000456)	afap1l1b (ENSXMAG00000000445)
Poecilia	ANCESTRAL SPECIES	7	ENSGT00950000183204.a.a.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Guppy	MODERN SPECIES	444	FBXO40 (ENSPREG00000008775)	ENSPREG00000008752	trarg1b (ENSPREG00000008738)	ENSPREG00000008693	cryba1b (ENSPREG00000008678)	unc119b (ENSPREG00000008657)	ENSPREG00000008639	ENSPREG00000008629	vtnb (ENSPREG00000008618)	aldh3a2b (ENSPREG00000008582)	ca4c (ENSPREG00000008517)	crcp (ENSPREG00000008487)	ENSPREG00000008478	tpst1l (ENSPREG00000008413)	tmtops3b (ENSPREG00000008102)	ENSPREG00000008013 #22	TCERG1 (ENSPREG00000007921)	PCYOX1L (ENSPREG00000007899)	CREBRF (ENSPREG00000007884)	BNIP1 (ENSPREG00000007862)	bod1 (ENSPREG00000007838)	htatsf1 (ENSPREG00000007811)	EBF1 (ENSPREG00000007760) #21	RNF145 (ENSPREG00000007712) #20	ublcp1 (ENSPREG00000007679) #19	IL12B (ENSPREG00000007646) #18	ubtd2 (ENSPREG00000007621)	ENSPREG00000007607	ABLIM3 (ENSPREG00000007581)	ENSPREG00000007561	fgf13b (ENSPREG00000007543)
NAME_6	ANCESTRAL SPECIES	1	ENSGT00950000183204.a.a.b.a	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00950000183067.a.b.a.c
Amazon molly	MODERN SPECIES	1287																ENSPFOG00000001735 #22
Sailfin molly	DUPLICATION
Sailfin molly	MODERN SPECIES	2494											ENSPLAG00000005962	ENSPLAG00000005970	crcp (ENSPLAG00000005996)	tpst1l (ENSPLAG00000006024)	tmtops3b (ENSPLAG00000006061)	ENSPLAG00000006081 #22	ENSPLAG00000006097
Sailfin molly	MODERN SPECIES	3319															ppp4r2b (ENSPLAG00000001782)	ENSPLAG00000001749 #22
Ovalentaria_B	ANCESTRAL SPECIES	16	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Cichlidae	ANCESTRAL SPECIES	4	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Pseudocrenilabrinae	ANCESTRAL SPECIES	14	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00940000161131.a.b.a.a	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Nile tilapia	MODERN SPECIES	1	ENSONIG00000008706	cryba1b (ENSONIG00000008704)	unc119b (ENSONIG00000037571)	slc13a2 (ENSONIG00000008698)	vtnb (ENSONIG00000040576)	ENSONIG00000038779	aldh3a2b (ENSONIG00000008691)	ca4c (ENSONIG00000034358)	asl (ENSONIG00000008683)	crcp (ENSONIG00000042686)	ENSONIG00000037290	ENSONIG00000008680	ENSONIG00000039957	tpst1l (ENSONIG00000008675)	tmtops3b (ENSONIG00000008673)	ENSONIG00000008668 #22	ENSONIG00000008664 #25	TCERG1 (ENSONIG00000008655)	PCYOX1L (ENSONIG00000008650)	CREBRF (ENSONIG00000008647)	BNIP1 (ENSONIG00000008646)	STC2 (ENSONIG00000008645)	bod1 (ENSONIG00000042231)	htatsf1 (ENSONIG00000008638)	EBF1 (ENSONIG00000008631) #21	RNF145 (ENSONIG00000008627) #20	ublcp1 (ENSONIG00000008623) #19	IL12B (ENSONIG00000008618) #18	ubtd2 (ENSONIG00000008615)	ADRB2 (ENSONIG00000036346)	ablim3 (ENSONIG00000008605)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	22	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k	ENSGT00940000161131.a.b.a.a	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Haplochromini	ANCESTRAL SPECIES	8	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k.n.a	ENSGT00940000161131.a.b.a.a	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Haplochromini_A	ANCESTRAL SPECIES	6	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k.n.a	ENSGT00940000161131.a.b.a.a	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Haplochromini_B	ANCESTRAL SPECIES	16	ENSGT00940000166421	ENSGT00940000160337.f	ENSGT00390000008688.l	ENSGT00940000167003	ENSGT00390000014595.a.a.b	ENSGT01030000234550.a.a.c.a.a.m	ENSGT00530000063751.b.i	ENSGT00920000149180.a	ENSGT00940000165264.a	ENSGT00940000155690.a	ENSGT00950000183122.B	ENSGT00390000005182.k.n.a	ENSGT00390000014189	ENSGT00390000006030.d.a.a	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000157281 #20	ENSGT00390000010107 #19	ENSGT00390000012630.A.a #18	ENSGT00940000156641	ENSGT00940000159538.h	ENSGT00950000182850.a.b.a.b.a.a
Zebra mbuna	MODERN SPECIES	1092	ENSMZEG00005025202	ENSMZEG00005025211	trarg1b (ENSMZEG00005025220)	ENSMZEG00005025222	cryba1b (ENSMZEG00005025226)	unc119b (ENSMZEG00005025228)	slc13a2 (ENSMZEG00005025231)	vtnb (ENSMZEG00005025236)	aldh3a2b (ENSMZEG00005025239)	ca4c (ENSMZEG00005025244)	asl (ENSMZEG00005025249)	ENSMZEG00005025254	crcp (ENSMZEG00005025255)	tpst1l (ENSMZEG00005025257)	tmtops3b (ENSMZEG00005025258)	ENSMZEG00005025262 #22	ENSMZEG00005025265 #25	TCERG1 (ENSMZEG00005025267)	PCYOX1L (ENSMZEG00005025274)	CREBRF (ENSMZEG00005025280)	BNIP1 (ENSMZEG00005025287)	STC2 (ENSMZEG00005000115)	bod1 (ENSMZEG00005000477)	htatsf1 (ENSMZEG00005000485)	EBF1 (ENSMZEG00005000538) #21	RNF145 (ENSMZEG00005000588) #20	ublcp1 (ENSMZEG00005000662) #19	IL12B (ENSMZEG00005000714) #18	ubtd2 (ENSMZEG00005000741)	ADRB2 (ENSMZEG00005000756)	ABLIM3 (ENSMZEG00005000761)
Eastern happy	MODERN SPECIES	1	unc119b (ENSACLG00000007451)	slc13a2 (ENSACLG00000007456)	vtnb (ENSACLG00000007469)	ENSACLG00000007481	aldh3a2b (ENSACLG00000007486)	ENSACLG00000007493	asl (ENSACLG00000007500)	ENSACLG00000007552	ENSACLG00000007567	ENSACLG00000007575	ENSACLG00000007579	ENSACLG00000007582	crcp (ENSACLG00000007588)	tpst1l (ENSACLG00000007612)	tmtops3b (ENSACLG00000007618)	ENSACLG00000007659 #22	ENSACLG00000007689	TCERG1 (ENSACLG00000007702)	PCYOX1L (ENSACLG00000007754)	CREBRF (ENSACLG00000007766)	BNIP1 (ENSACLG00000007807)	ENSACLG00000008086	htatsf1 (ENSACLG00000008096)	EBF1 (ENSACLG00000008113) #21	ENSACLG00000008129	ENSACLG00000008130	RNF145 (ENSACLG00000008134) #20	ublcp1 (ENSACLG00000008166) #19	IL12B (ENSACLG00000008190) #18	ubtd2 (ENSACLG00000008197)	ADRB2 (ENSACLG00000008511)
P. nyererei	MODERN SPECIES	321	trarg1b (ENSPNYG00000017661)	ENSPNYG00000017626	cryba1b (ENSPNYG00000017449)	unc119b (ENSPNYG00000017401)	slc13a2 (ENSPNYG00000017342)	vtnb (ENSPNYG00000017333)	aldh3a2b (ENSPNYG00000017314)	ENSPNYG00000017249	asl (ENSPNYG00000017208)	ENSPNYG00000017189	ENSPNYG00000017171	ENSPNYG00000017143	crcp (ENSPNYG00000016988)	tpst1l (ENSPNYG00000016957)	tmtops3b (ENSPNYG00000016902)	ENSPNYG00000016867 #22	ENSPNYG00000016846	TCERG1 (ENSPNYG00000016818)	PCYOX1L (ENSPNYG00000016803)	CREBRF (ENSPNYG00000016767)	BNIP1 (ENSPNYG00000016750)	ENSPNYG00000016725	htatsf1 (ENSPNYG00000016693)	EBF1 (ENSPNYG00000016643) #21	ublcp1 (ENSPNYG00000016605) #19	IL12B (ENSPNYG00000016585) #18	ubtd2 (ENSPNYG00000016542)	ADRB2 (ENSPNYG00000016532)	ABLIM3 (ENSPNYG00000016482)	ENSPNYG00000016458	afap1l1b (ENSPNYG00000016417)
Burton s mouthbrooder	MODERN SPECIES	347	trarg1b (ENSHBUG00000004963)	ENSHBUG00000005028	cryba1b (ENSHBUG00000004952)	unc119b (ENSHBUG00000000123)	slc13a2 (ENSHBUG00000004941)	vtnb (ENSHBUG00000004897)	ENSHBUG00000004871	aldh3a2b (ENSHBUG00000004863)	ca4c (ENSHBUG00000004833)	asl (ENSHBUG00000004814)	ENSHBUG00000004797	ENSHBUG00000004788	crcp (ENSHBUG00000004779)	tpst1l (ENSHBUG00000004760)	tmtops3b (ENSHBUG00000004742)	ENSHBUG00000004665 #22	ENSHBUG00000004619 #25	TCERG1 (ENSHBUG00000004587)	PCYOX1L (ENSHBUG00000004569)	CREBRF (ENSHBUG00000004512)	BNIP1 (ENSHBUG00000004466)	ENSHBUG00000004421	htatsf1 (ENSHBUG00000004392)	EBF1 (ENSHBUG00000004347) #21	RNF145 (ENSHBUG00000004241) #20	ublcp1 (ENSHBUG00000000106) #19	IL12B (ENSHBUG00000004166) #18	ubtd2 (ENSHBUG00000004137)	ADRB2 (ENSHBUG00000004125)	ablim3 (ENSHBUG00000004111)	afap1l1b (ENSHBUG00000004020)
Lyretail cichlid	MODERN SPECIES	297	ENSNBRG00000002483	ENSNBRG00000002517	trarg1b (ENSNBRG00000002584)	ENSNBRG00000002596	cryba1b (ENSNBRG00000002658)	unc119b (ENSNBRG00000002828)	slc13a2 (ENSNBRG00000002923)	vtnb (ENSNBRG00000002941)	aldh3a2b (ENSNBRG00000002960)	ca4c (ENSNBRG00000002978)	ENSNBRG00000003026	asl (ENSNBRG00000003042)	crcp (ENSNBRG00000003094)	tpst1l (ENSNBRG00000003122)	tmtops3b (ENSNBRG00000003163)	ENSNBRG00000003331 #22	ENSNBRG00000003369 #25	TCERG1 (ENSNBRG00000003409)	PCYOX1L (ENSNBRG00000003661)	CREBRF (ENSNBRG00000003698)	BNIP1 (ENSNBRG00000003746)	ENSNBRG00000003779	htatsf1 (ENSNBRG00000003818)	EBF1 (ENSNBRG00000003853) #21	RNF145 (ENSNBRG00000003907) #20	ublcp1 (ENSNBRG00000003982) #19	IL12B (ENSNBRG00000004011) #18	ubtd2 (ENSNBRG00000004032)	ADRB2 (ENSNBRG00000004061)	ablim3 (ENSNBRG00000004085)	afap1l1b (ENSNBRG00000004182)
Midas cichlid	MODERN SPECIES	60													crcp (ENSACIG00000020248)	tpst1l (ENSACIG00000020259)	tmtops3b (ENSACIG00000020275)	CLINT1 (ENSACIG00000020282) #22	ENSACIG00000020307 #25	TCERG1 (ENSACIG00000020318)	PCYOX1L (ENSACIG00000020354)	CREBRF (ENSACIG00000020364)	BNIP1 (ENSACIG00000020392)	ENSACIG00000020412	ENSACIG00000020454	htatsf1 (ENSACIG00000020459)	EBF1 (ENSACIG00000020484) #21	RNF145 (ENSACIG00000020500) #20	ublcp1 (ENSACIG00000020518) #19	IL12B (ENSACIG00000020532) #18	ubtd2 (ENSACIG00000020544)	ADRB2 (ENSACIG00000020563)	ablim3 (ENSACIG00000020709)
Pomacentridae	ANCESTRAL SPECIES	10	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k	ENSGT00950000183122.B	ENSGT00940000155690.a	ENSGT00940000165264.a
Pomacentridae_A	ANCESTRAL SPECIES	3	ENSGT00940000161027.a	ENSGT00940000153370.a.a	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k	ENSGT00950000183122.B	ENSGT00940000155690.a	ENSGT00940000165264.a
Amphiprion	ANCESTRAL SPECIES	3	ENSGT00390000013169	ENSGT00950000182887.C.b.b.a	ENSGT00940000156974.e.b	ENSGT00940000159516	ENSGT00940000162313.b	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.a.a	ENSGT00940000159538.h	ENSGT00940000156641	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281 #20	ENSGT00940000181697	ENSGT00950000182859.A.a.b.b.d.c.b #21	ENSGT00940000181131	ENSGT00940000155650.a.b #22	ENSGT00940000161042 #25	ENSGT00940000157770	ENSGT00390000011206.b	ENSGT01090000259997.a.d.b.b.b.b.b.c	ENSGT00390000007125.b	ENSGT00390000014412.k	ENSGT00390000005989.a.b.a.b	ENSGT00940000156198.c.b	ENSGT00390000009902	ENSGT01100000263502.A.a.a.a.a.b	ENSGT00390000006030.d.a.a	ENSGT00390000014189	ENSGT00390000005182.k	ENSGT00950000183122.B	ENSGT00940000155690.a
Clown anemonefish	MODERN SPECIES	2533																ENSAOCG00000020612 #22	ENSAOCG00000020566 #25	TCERG1 (ENSAOCG00000020532)	PCYOX1L (ENSAOCG00000020311)	ENSAOCG00000020298	CREBRF (ENSAOCG00000020282)
Orange clownfish	MODERN SPECIES	6	cxadr (ENSAPEG00000015699)	btg3 (ENSAPEG00000015710)	ENSAPEG00000015722	fgf13b (ENSAPEG00000015730)	ENSAPEG00000015745	afap1l1b (ENSAPEG00000015760)	ablim3 (ENSAPEG00000015796)	ADRB2 (ENSAPEG00000015923)	ubtd2 (ENSAPEG00000015929)	IL12B (ENSAPEG00000015946) #18	ublcp1 (ENSAPEG00000015991) #19	RNF145 (ENSAPEG00000016047) #20	ENSAPEG00000016088	EBF1 (ENSAPEG00000016110) #21	ENSAPEG00000016158	CLINT1 (ENSAPEG00000016192) #22	TCERG1 (ENSAPEG00000016260)	PCYOX1L (ENSAPEG00000016324)	ENSAPEG00000016336	CREBRF (ENSAPEG00000016349)	BNIP1 (ENSAPEG00000016372)	STC2 (ENSAPEG00000016395)	htatsf1 (ENSAPEG00000016432)	tmtops3b (ENSAPEG00000016478)	tpst1l (ENSAPEG00000016628)	crcp (ENSAPEG00000016688)	ENSAPEG00000016704	asl (ENSAPEG00000016734)	ca4c (ENSAPEG00000016800)	aldh3a2b (ENSAPEG00000016850)	vtnb (ENSAPEG00000016885)
Spiny chromis	MODERN SPECIES	673											ubtd2 (ENSAPOG00000009308)	ENSAPOG00000009345 #18	ublcp1 (ENSAPOG00000009397) #19	RNF145 (ENSAPOG00000009468) #20	EBF1 (ENSAPOG00000009533) #21	CLINT1 (ENSAPOG00000009588) #22	TCERG1 (ENSAPOG00000009625)	ENSAPOG00000009654	PCYOX1L (ENSAPOG00000000273)	CREBRF (ENSAPOG00000009721)	BNIP1 (ENSAPOG00000009776)	htatsf1 (ENSAPOG00000009823)	ENSAPOG00000009867	tmtops3b (ENSAPOG00000001074)	tpst1l (ENSAPOG00000009884)
Bicolor damselfish	MODERN SPECIES	1570																CLINT1 (ENSSPAG00000000511) #22	TCERG1 (ENSSPAG00000000603)	PCYOX1L (ENSSPAG00000000628)	CREBRF (ENSSPAG00000000649)	BNIP1 (ENSSPAG00000000666)	STC2 (ENSSPAG00000000697)	htatsf1 (ENSSPAG00000000732)	ENSSPAG00000000777
Osteoglossiformes	ANCESTRAL SPECIES	23	ENSGT00940000157061.b	ENSGT00530000063371.C.a.a	ENSGT00940000164705	ENSGT00390000010712	ENSGT00940000156835	ENSGT00940000161176	ENSGT00940000164576.b.a.b	ENSGT00390000005589.a.b.m	ENSGT00950000183067.a.b.a.c	ENSGT00950000182850.a.b.a.b.b.l	ENSGT00940000159538.g.b	ENSGT00390000012630.A.a #18	ENSGT00390000010107 #19	ENSGT00940000157281.w #20	ENSGT00950000182859.A.a.b.b.b #21	ENSGT00940000155650.a.b #22	ENSGT00950000182864.a.b.b.a.b.a.b	ENSGT00390000011206.b	ENSGT00390000007125.b.g	ENSGT00390000014412.k	ENSGT00390000005989.a.a.b	ENSGT00390000005989.a.b	ENSGT00940000156198.c.b	ENSGT00940000154998.a.a.s	ENSGT00390000000483.a.a.e	ENSGT00940000155857.f.b	ENSGT00390000018781	ENSGT00940000156386.c	ENSGT00940000160880.d	ENSGT00510000046929.b.g	ENSGT00940000160864
Asian bonytongue	MODERN SPECIES	19	fam53c (ENSSFOG00015033270)	ENSSFOG00015022968	zmat2 (ENSSFOG00015022982)	lcp2a (ENSSFOG00015022992)	foxi3a (ENSSFOG00015028060)	grpel2 (ENSSFOG00015030367)	afap1l1b (ENSSFOG00015023026)	ablim3 (ENSSFOG00015023081)	adrb2b (ENSSFOG00015030060)	ubtd2 (ENSSFOG00015030397)	ENSSFOG00015024617 #18	ublcp1 (ENSSFOG00015023175) #19	RNF145 (ENSSFOG00015023193) #20	EBF1 (ENSSFOG00015023208) #21	ENSSFOG00015023239	CLINT1 (ENSSFOG00015023249) #22	TCERG1 (ENSSFOG00015023283)	ENSSFOG00015000086	PCYOX1L (ENSSFOG00015024935)	atp6v0e1 (ENSSFOG00015026286)	CREBRF (ENSSFOG00015000199)	stc2a (ENSSFOG00015000247)	bod1 (ENSSFOG00015000254)	CPEB4 (ENSSFOG00015000264)	nsg2 (ENSSFOG00015000318)	drd1b (ENSSFOG00015000350)	RAD50 (ENSSFOG00015000414)	kif3a (ENSSFOG00015000552)	POU4F3 (ENSSFOG00015000571)	ENSSFOG00015000620	GRXCR2 (ENSSFOG00015029720)
P. kingsleyae	MODERN SPECIES	583																CLINT1 (ENSPKIG00000024248) #22	ENSPKIG00000024285 #25	TCERG1 (ENSPKIG00000024321)	ENSPKIG00000024409	PCYOX1L (ENSPKIG00000024455)	ENSPKIG00000024473
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Otomorpha	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Otophysi	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Cyprinoidei	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Cyprininae	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Cyprininae_a	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Golden-line barbel	DUPLICATION
Golden-line barbel	MODERN SPECIES	90	pigs (ENSSGRG00000053751)	aldocb (ENSSGRG00000053779)	ENSSGRG00000054232	chm (ENSSGRG00000054233)	dacha (ENSSGRG00000054235)	alg13 (ENSSGRG00000054236)	TRPC5 (ENSSGRG00000054238)	hmgb3b (ENSSGRG00000054240)	mtmr1b (ENSSGRG00000054242)	ENSSGRG00000054244	ENSSGRG00000054246	map4k6 (ENSSGRG00000054251)	ENSSGRG00000054341	rnf145b (ENSSGRG00000054345) #20	EBF1 (ENSSGRG00000054348) #21	ENSSGRG00000054351 #22	CLINT1 (ENSSGRG00000054352) #22	TCERG1 (ENSSGRG00000054353)	ppp2r2bb (ENSSGRG00000054355)	PCYOX1L (ENSSGRG00000054370)	CREBRF (ENSSGRG00000054373)	BNIP1 (ENSSGRG00000054374)	STC2 (ENSSGRG00000054376)	bod1 (ENSSGRG00000054377)	CPEB4 (ENSSGRG00000054379)	nsg2 (ENSSGRG00000054408)	msx2b (ENSSGRG00000054409)	drd1b (ENSSGRG00000054410)	RAD50 (ENSSGRG00000054417)	ENSSGRG00000054462	il13 (ENSSGRG00000054463)
Golden-line barbel	MODERN SPECIES	38	hnf1bb (ENSSGRG00000045579)	heatr6 (ENSSGRG00000045575)	ENSSGRG00000045574	dynll2b (ENSSGRG00000045555)	pigs (ENSSGRG00000045552)	ENSSGRG00000045551	mrm3b (ENSSGRG00000045545)	chm (ENSSGRG00000045542)	dacha (ENSSGRG00000045540)	alg13 (ENSSGRG00000045539)	TRPC5 (ENSSGRG00000045537)	mtmr1b (ENSSGRG00000045352)	map4k6 (ENSSGRG00000045168)	rnf145b (ENSSGRG00000045155) #20	EBF1 (ENSSGRG00000044050) #21	ENSSGRG00000044028 #22	CLINT1 (ENSSGRG00000044027) #22	TCERG1 (ENSSGRG00000043989)	ppp2r2bb (ENSSGRG00000043826)	PCYOX1L (ENSSGRG00000043824)	CREBRF (ENSSGRG00000043793)	BNIP1 (ENSSGRG00000043791)	STC2 (ENSSGRG00000043790)	bod1 (ENSSGRG00000043789)	cpeb4b (ENSSGRG00000043538)	nsg2 (ENSSGRG00000043535)	msx2b (ENSSGRG00000043534)	drd1b (ENSSGRG00000043533)	RAD50 (ENSSGRG00000043514)	il13 (ENSSGRG00000043508)	il13 (ENSSGRG00000043500)
Characiphysae	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Characoidei	ANCESTRAL SPECIES																	ENSGT00940000155650.b #22
Mexicana tetra	MODERN SPECIES	139																ENSAMXG00000039260 #22	TCERG1 (ENSAMXG00000039466)	ENSAMXG00000033029	bod1 (ENSAMXG00000042577)	STC2 (ENSAMXG00000014991)	BNIP1 (ENSAMXG00000041993)	CREBRF (ENSAMXG00000000435)	ATP6V0E1 (ENSAMXG00000035719)	PCYOX1L (ENSAMXG00000040222)
Spotted gar	MODERN SPECIES	672	fabp6 (ENSLOCG00000009437) #14	ccnjl (ENSLOCG00000009433) #13	C1QTNF2 (ENSLOCG00000009423) #12	slu7 (ENSLOCG00000009410) #10	grpel2 (ENSLOCG00000009404)	afap1l1a (ENSLOCG00000009385)	ablim3 (ENSLOCG00000009374)	SH3TC2 (ENSLOCG00000009362)	adrb2a (ENSLOCG00000009352)	ubtd2 (ENSLOCG00000009340)	EFCAB9 (ENSLOCG00000009328)	il12ba (ENSLOCG00000009317) #18	ublcp1 (ENSLOCG00000009305) #19	rnf145b (ENSLOCG00000009293) #20	ebf3a (ENSLOCG00000009282) #21	clint1a (ENSLOCG00000009271) #22	LSM11 (ENSLOCG00000009264) #23	thg1l (ENSLOCG00000009255) #24	ADAM19 (ENSLOCG00000009244) #26	ENSLOCG00000009227	GPR151 (ENSLOCG00000018302)	ppp2r2bb (ENSLOCG00000009212)	PCYOX1L (ENSLOCG00000009203)	IL17B (ENSLOCG00000009196)	rpl26 (ENSLOCG00000009189)	atp6v0e1 (ENSLOCG00000009182)	CREBRF (ENSLOCG00000009174)	BNIP1 (ENSLOCG00000009167)	nkx2.5 (ENSLOCG00000009163)	stc2a (ENSLOCG00000009157)	bod1 (ENSLOCG00000009148)
Reedfish	MODERN SPECIES	2	ATP6V0E1 (ENSECRG00000012875)	CREBRF (ENSECRG00000012865)	BNIP1 (ENSECRG00000012851)	BNIP1 (ENSECRG00000012841)	nkx2.5 (ENSECRG00000012831)	stc2a (ENSECRG00000012818)	BOD1 (ENSECRG00000012812)	CPEB4 (ENSECRG00000012778)	nsg2 (ENSECRG00000012742)	MSX2 (ENSECRG00000012727)	drd1b (ENSECRG00000012720)	ublcp1 (ENSECRG00000012695) #19	rnf145b (ENSECRG00000012658) #20	ENSECRG00000012625	ebf3a (ENSECRG00000012609) #21	clint1a (ENSECRG00000012588) #22	LSM11 (ENSECRG00000012570) #23	thg1l (ENSECRG00000012548) #24	ENSECRG00000012360 #26	TBC1D9B (ENSECRG00000012193)	rnf130 (ENSECRG00000012143)	F2RL3 (ENSECRG00000012122)	ENSECRG00000012105	ENSECRG00000012083	ENSECRG00000012066	ENSECRG00000012052	PCDH1 (ENSECRG00000012042)	ENSECRG00000011989	ENSECRG00000011972	ENSECRG00000011959	smad5 (ENSECRG00000011934)
Elephant shark	MODERN SPECIES	1504	SIL1 (ENSCMIG00000019516)	hspa9 (ENSCMIG00000019528)	adra2da (ENSCMIG00000019559)	ENSCMIG00000019560	ENSCMIG00000019561	JAKMIP2 (ENSCMIG00000019564)	ENSCMIG00000019567	ENSCMIG00000019599	STK32A (ENSCMIG00000019640)	ENSCMIG00000019649	ENSCMIG00000019657	ENSCMIG00000019660	tcerg1a (ENSCMIG00000019669)	rnf145b (ENSCMIG00000019718) #20	ebf3a (ENSCMIG00000019735) #21	clint1a (ENSCMIG00000019744) #22	ENSCMIG00000019746 #23	thg1l (ENSCMIG00000019749) #24	SOX30 (ENSCMIG00000019752) #25	ADAM19 (ENSCMIG00000019754) #26	ublcp1 (ENSCMIG00000019756) #19	ENSCMIG00000019761	ENSCMIG00000019762	DOCK2 (ENSCMIG00000019797)	INSYN2B (ENSCMIG00000019814)	FOXI1 (ENSCMIG00000019816)	ENSCMIG00000019820	SLC34A1 (ENSCMIG00000019822)	ENSCMIG00000019823	ENSCMIG00000019826	ENSCMIG00000019827
Cyclostomata	ANCESTRAL SPECIES	1119															ENSGT00950000182859.A.a.a ##21	ENSGT00940000155650 #22
Lamprey	MODERN SPECIES	33															ENSPMAG00000004238 ##21	ENSPMAG00000004246 #22	ENSPMAG00000004292
Hagfish	MODERN SPECIES	907				tex261 (ENSEBUG00000013370)	ENSEBUG00000001987	ENSEBUG00000000699	ENSEBUG00000000685	ENSEBUG00000007672	ENSEBUG00000005010	ENSEBUG00000002841	ENSEBUG00000004629	ENSEBUG00000011353	ENSEBUG00000001612	ENSEBUG00000013035	ENSEBUG00000006201	ENSEBUG00000008247 #22	ENSEBUG00000006802	ENSEBUG00000009722	ENSEBUG00000007425	ENSEBUG00000015595	ENSEBUG00000010616	ENSEBUG00000008218	ENSEBUG00000016348	ENSEBUG00000000985	ENSEBUG00000011511	ENSEBUG00000012561	ENSEBUG00000003266	ENSEBUG00000011763	ENSEBUG00000009293	ENSEBUG00000005031	ENSEBUG00000005911
Ecdysozoa	ANCESTRAL SPECIES																	ENSGT00940000155650 #22
Fruitfly	MODERN SPECIES	19	CG7071 (FBgn0260467)	CG5382 (FBgn0038950)	Polr3F (FBgn0038951)	PyK (FBgn0267385)	CG7069 (FBgn0038952)	CG18596 (FBgn0038953)	CG34149 (FBgn0083985)	CG43342 (FBgn0263047)	Gpdh3 (FBgn0263048)	CAH8 (FBgn0038956)	CG7059 (FBgn0038957)	CG13857 (FBgn0038958)	CG13856 (FBgn0038959)	CG13855 (FBgn0038960)	CG13850 (FBgn0038961)	lqfR (FBgn0261279) #22	Nop56 (FBgn0038964)	mats (FBgn0038965)	pinta (FBgn0038966)	CG13847 (FBgn0038967)	CG12499 (FBgn0038968)	CG34288 (FBgn0085317)	CG34376 (FBgn0085405)	Rpn7 (FBgn0028688)	AP-2mu (FBgn0263351)	CG7054 (FBgn0038972)	Pebp1 (FBgn0038973)	CG5377 (FBgn0038974)	Nrx-1 (FBgn0038975)	Pfdn5 (FBgn0038976)	CG5376 (FBgn0038977)