Boreoeutheria	ANCESTRAL SPECIES	2	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163845	ENSGT00940000158579	ENSGT00940000155183 #35	ENSGT00940000158193
Laurasiatheria	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Laurasiatheria_a	ANCESTRAL SPECIES	3	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Laurasiatheria_b	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Carnivora	ANCESTRAL SPECIES	10	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.a.b #34	ENSGT00940000163441.f.b.a.a ##37	ENSGT00940000155183 #35	ENSGT00940000158193
Caniformia	ANCESTRAL SPECIES		ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.a.b #34	ENSGT00940000163441.f.b.a.a.b ##37	ENSGT00940000163441.f.b.a.a.a ##37	ENSGT00940000155183.a #35
Canidae	ANCESTRAL SPECIES	39	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a.i
Canis_lupus	ANCESTRAL SPECIES	38	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00940000163122 #17	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000161526.a.d	ENSGT00940000161526.a.c	ENSGT00940000163441.f.a.a.b.a #34	ENSGT00940000158193
Dingo	MODERN SPECIES	63	PDE9A (ENSCAFG00020018526) #7	WDR4 (ENSCAFG00020018728) #8	NDUFV3 (ENSCAFG00020018747) #9	PKNOX1 (ENSCAFG00020018749) #10	ENSCAFG00020018761 #11	ENSCAFG00020018802 #12	U2AF1 (ENSCAFG00020018861) #13	CRYAA (ENSCAFG00020018863) #14	SIK1 (ENSCAFG00020018879) #15	HSF2BP (ENSCAFG00020018893) #16	ENSCAFG00020018896 #17	RRP1B (ENSCAFG00020018901) #18	PDXK (ENSCAFG00020018948) #19	CSTB (ENSCAFG00020018974) #20	RRP1 (ENSCAFG00020018979) #21	AGPAT3 (ENSCAFG00020018995) #22	TRAPPC10 (ENSCAFG00020019017) #23	PWP2 (ENSCAFG00020019199) #24	GATD3 (ENSCAFG00020019216) #25	ICOSLG (ENSCAFG00020019220) #26	ENSCAFG00020019221 #27	AIRE (ENSCAFG00020019230) #28	PFKL (ENSCAFG00020019252) #29	CFAP410 (ENSCAFG00020019259) #30	TRPM2 (ENSCAFG00020019262) #31	LRRC3 (ENSCAFG00020019276) #32	TSPEAR (ENSCAFG00020019277) #33	ENSCAFG00020019289 #34	ENSCAFG00020019303 #35	ENSCAFG00020019310 #36	ENSCAFG00020019341 #37
Dog	MODERN SPECIES	24	RSPH1 (ENSCAFG00845016424)	SLC37A1 (ENSCAFG00845016674)	ENSCAFG00845016845 #7	WDR4 (ENSCAFG00845016943) #8	ENSCAFG00845017044 #10	CBS (ENSCAFG00845017169) #12	U2AF1 (ENSCAFG00845017455) #13	CRYAA (ENSCAFG00845017570) #14	SIK1 (ENSCAFG00845017641) #15	HSF2BP (ENSCAFG00845017775) #16	ENSCAFG00845017980 #17	RRP1B (ENSCAFG00845018066) #18	PDXK (ENSCAFG00845018299) #19	CSTB (ENSCAFG00845018589) #20	RRP1 (ENSCAFG00845018662) #21	AGPAT3 (ENSCAFG00845018820) #22	ENSCAFG00845018890	TRAPPC10 (ENSCAFG00845018939) #23	PWP2 (ENSCAFG00845019135) #24	GATD3 (ENSCAFG00845019382) #25	ICOSLG (ENSCAFG00845019541) #26	DNMT3L (ENSCAFG00845019683) #27	AIRE (ENSCAFG00845019838) #28	PFKL (ENSCAFG00845020069) #29	ICOSLG (ENSCAFG00845020326) #30	TRPM2 (ENSCAFG00845020419) #31	TSPEAR (ENSCAFG00845020761) #33	ENSCAFG00845020843 ##37	ENSCAFG00845021000 #36	ENSCAFG00845021169	ENSCAFG00845021222 #34
Red fox	MODERN SPECIES	209										ENSVVUG00000024523 #17	HSF2BP (ENSVVUG00000024511) #16	RRP1B (ENSVVUG00000024509) #18	PDXK (ENSVVUG00000024507) #19	CSTB (ENSVVUG00000024503) #20	ENSVVUG00000024498 #21	AGPAT3 (ENSVVUG00000024491) #22	TRAPPC10 (ENSVVUG00000024489) #23	PWP2 (ENSVVUG00000024125) #24	GATD3 (ENSVVUG00000024083) #25	ICOSLG (ENSVVUG00000024076) #26	ENSVVUG00000024071 #27	AIRE (ENSVVUG00000024053) #28	PFKL (ENSVVUG00000024044) #29	CFAP410 (ENSVVUG00000024040) #30	ENSVVUG00000024038 #31	ENSVVUG00000024028 #31	LRRC3 (ENSVVUG00000024026) #32	ENSVVUG00000024023 ##37	ENSVVUG00000023984 ##37	ENSVVUG00000023974 ##37	ENSVVUG00000023958 ##37
Caniformia_b	ANCESTRAL SPECIES		ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Ursidae	ANCESTRAL SPECIES	1	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a.cb #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.a.a.b ##37	ENSGT00940000163441.f.b.a.a.a.c ##37	ENSGT00940000161526.a.a	ENSGT00940000158193
Ursus	ANCESTRAL SPECIES	94	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a.cb #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000159292.a #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.a.b #34	ENSGT00940000161526.a.a	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
American black bear	MODERN SPECIES	4384																AGPAT3 (ENSUAMG00000016789) #22
Polar bear	MODERN SPECIES	394	UBASH3A (ENSUMAG00000025543)	RSPH1 (ENSUMAG00000025542)	SLC37A1 (ENSUMAG00000025541)	PDE9A (ENSUMAG00000025540) #7	WDR4 (ENSUMAG00000025539) #8	NDUFV3 (ENSUMAG00000025538) #9	PKNOX1 (ENSUMAG00000025537) #10	CBS (ENSUMAG00000025527) #12	U2AF1 (ENSUMAG00000025525) #13	CRYAA (ENSUMAG00000025524) #14	SIK1 (ENSUMAG00000025514) #15	HSF2BP (ENSUMAG00000025511) #16	RRP1B (ENSUMAG00000025510) #18	PDXK (ENSUMAG00000025509) #19	RRP1 (ENSUMAG00000025507) #21	AGPAT3 (ENSUMAG00000025506) #22	TRAPPC10 (ENSUMAG00000025503) #23	PWP2 (ENSUMAG00000025481) #24	GATD3 (ENSUMAG00000025476) #25	ICOSLG (ENSUMAG00000025473) #26	ENSUMAG00000025471 #27	PFKL (ENSUMAG00000025470) #29	ENSUMAG00000025469 #30	TRPM2 (ENSUMAG00000025428) #31	LRRC3 (ENSUMAG00000025427) #32	TSPEAR (ENSUMAG00000025426) #33	ENSUMAG00000025425 ##37	ENSUMAG00000025423 #36	ENSUMAG00000025422	ENSUMAG00000025421	UBE2G2 (ENSUMAG00000025420)
Giant Panda	MODERN SPECIES		UBASH3A (ENSAMEG00000001955)	ENSAMEG00000001940	SLC37A1 (ENSAMEG00000001892)	PDE9A (ENSAMEG00000001848) #7	WDR4 (ENSAMEG00000001823) #8	NDUFV3 (ENSAMEG00000001819) #9	PKNOX1 (ENSAMEG00000001778) #10	ENSAMEG00000001765 #12	ENSAMEG00000000149 #15	HSF2BP (ENSAMEG00000011388) #16	RRP1B (ENSAMEG00000011401) #18	PDXK (ENSAMEG00000011430) #19	CSTB (ENSAMEG00000011447) #20	RRP1 (ENSAMEG00000011448) #21	ENSAMEG00000023579	AGPAT3 (ENSAMEG00000010987) #22	TRAPPC10 (ENSAMEG00000010970) #23	PWP2 (ENSAMEG00000010907) #24	GATD3 (ENSAMEG00000010894) #25	ENSAMEG00000010883 #26	ENSAMEG00000010872 #27	AIRE (ENSAMEG00000010859) #28	PFKL (ENSAMEG00000010751) #29	CFAP410 (ENSAMEG00000010739) #30	TRPM2 (ENSAMEG00000010610) #31	ENSAMEG00000025346 #33	ENSAMEG00000031142 ##37	ENSAMEG00000029366 ##37	ENSAMEG00000028544	ENSAMEG00000031221 ##35	ENSAMEG00000028758 #35
Mustelinae	ANCESTRAL SPECIES	67	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
American mink	MODERN SPECIES	122	RSPH1 (ENSNVIG00000005890)	SLC37A1 (ENSNVIG00000005945)	PDE9A (ENSNVIG00000006007) #7	WDR4 (ENSNVIG00000006026) #8	ENSNVIG00000006056 #9	PKNX1 (ENSNVIG00000006069) #10	CBS (ENSNVIG00000006101) #12	U2AF1 (ENSNVIG00000006310) #13	CRYAA (ENSNVIG00000006345) #14	SIK1 (ENSNVIG00000006387) #15	HSF2BP (ENSNVIG00000006866) #16	RRP1B (ENSNVIG00000006928) #18	PDXK (ENSNVIG00000006971) #19	CSTB (ENSNVIG00000007044) #20	RRP1 (ENSNVIG00000007054) #21	AGPAT3 (ENSNVIG00000007070) #22	TRAPPC10 (ENSNVIG00000007089) #23	PWP2 (ENSNVIG00000007096) #24	GATD3 (ENSNVIG00000007184) #25	ICOSLG (ENSNVIG00000007190) #26	ENSNVIG00000007199 #27	AIRE (ENSNVIG00000007211) #28	PFKL (ENSNVIG00000007397) #29	ENSNVIG00000007455 #30	TRPM2 (ENSNVIG00000007475) #31	LRRC3 (ENSNVIG00000007665) #32	TSPEAR (ENSNVIG00000007674) #33	ENSNVIG00000007725	ENSNVIG00000007773 ##37	ENSNVIG00000007785	UBE2G2 (ENSNVIG00000007799)
Ferret	MODERN SPECIES	248	PDE9A (ENSMPUG00000009433) #7	WDR4 (ENSMPUG00000009605) #8	ENSMPUG00000009667 #9	PKNOX1 (ENSMPUG00000009673) #10	CBS (ENSMPUG00000009689) #12	U2AF1 (ENSMPUG00000009706) #13	CRYAA (ENSMPUG00000009713) #14	SIK1 (ENSMPUG00000009719) #15	ENSMPUG00000009768	HSF2BP (ENSMPUG00000009772) #16	RRP1B (ENSMPUG00000009810) #18	ENSMPUG00000019064	CSTB (ENSMPUG00000009819) #20	RRP1 (ENSMPUG00000009826) #21	ENSMPUG00000019065	AGPAT3 (ENSMPUG00000009918) #22	TRAPPC10 (ENSMPUG00000009927) #23	PWP2 (ENSMPUG00000009936) #24	GATD3 (ENSMPUG00000009943) #25	ICOSLG (ENSMPUG00000009996) #26	DNMT3L (ENSMPUG00000010003) #27	ENSMPUG00000010029	AIRE (ENSMPUG00000010031) #28	PFKL (ENSMPUG00000010091) #29	CFAP410 (ENSMPUG00000010108) #30	TRPM2 (ENSMPUG00000010155) #31	LRRC3 (ENSMPUG00000019066) #32	TSPEAR (ENSMPUG00000010176) #33	ENSMPUG00000019067	UBE2G2 (ENSMPUG00000010187)	ENSMPUG00000010234
Felidae	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.a.a.c ##37	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Panthera	ANCESTRAL SPECIES	17	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.a.a.c ##37	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Panthera_a	ANCESTRAL SPECIES	63	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33
lion	MODERN SPECIES	148															RRP1 (ENSPLOG00000017909) #21	AGPAT3 (ENSPLOG00000018245) #22	TRAPPC10 (ENSPLOG00000018286) #23	PWP2 (ENSPLOG00000018391) #24	ENSPLOG00000018453 #25	ENSPLOG00000018616 #26	DNMT3L (ENSPLOG00000018643) #27	AIRE (ENSPLOG00000018848) #28	PFKL (ENSPLOG00000018958) #29	CFAP410 (ENSPLOG00000019187) #30	TRPM2 (ENSPLOG00000019220) #31	LRRC3 (ENSPLOG00000019285) #32
leopard	MODERN SPECIES	148	RSPH1 (ENSPPRG00000008318)	SLC37A1 (ENSPPRG00000008368)	PDE9A (ENSPPRG00000008728) #7	WDR4 (ENSPPRG00000008824) #8	ENSPPRG00000008831 #9	PKNOX1 (ENSPPRG00000008876) #10	CBS (ENSPPRG00000009520) #12	U2AF1 (ENSPPRG00000009721) #13	CRYAA (ENSPPRG00000009838) #14	SIK1 (ENSPPRG00000010102) #15	HSF2BP (ENSPPRG00000010297) #16	RRP1B (ENSPPRG00000010356) #18	PDXK (ENSPPRG00000010569) #19	CSTB (ENSPPRG00000010619) #20	RRP1 (ENSPPRG00000010656) #21	AGPAT3 (ENSPPRG00000010943) #22	TRAPPC10 (ENSPPRG00000010959) #23	PWP2 (ENSPPRG00000011088) #24	GATD3 (ENSPPRG00000011216) #25	ICOSLG (ENSPPRG00000011258) #26	DNMT3L (ENSPPRG00000011340) #27	AIRE (ENSPPRG00000011376) #28	PFKL (ENSPPRG00000011485) #29	CFAP410 (ENSPPRG00000011592) #30	TRPM2 (ENSPPRG00000011778) #31	LRRC3 (ENSPPRG00000012330) #32	TSPEAR (ENSPPRG00000011892) #33
Cat	MODERN SPECIES	240	RSPH1 (ENSFCAG00000012707)	SLC37A1 (ENSFCAG00000012708)	PDE9A (ENSFCAG00000003965) #7	WDR4 (ENSFCAG00000003966) #8	NDUFV3 (ENSFCAG00000046775) #9	PKNOX1 (ENSFCAG00000042914) #10	CBS (ENSFCAG00000003969) #12	U2AF1 (ENSFCAG00000003970) #13	CRYAA (ENSFCAG00000000224) #14	SIK1 (ENSFCAG00000000225) #15	HSF2BP (ENSFCAG00000043141) #16	RRP1B (ENSFCAG00000010272) #18	PDXK (ENSFCAG00000008432) #19	ENSFCAG00000040822 #20	RRP1 (ENSFCAG00000008434) #21	AGPAT3 (ENSFCAG00000008438) #22	TRAPPC10 (ENSFCAG00000008440) #23	PWP2 (ENSFCAG00000004487) #24	ENSFCAG00000011959 #25	ENSFCAG00000048289	ICOSLG (ENSFCAG00000006687) #26	ENSFCAG00000000739 #27	AIRE (ENSFCAG00000007933) #28	PFKL (ENSFCAG00000003311) #29	CFAP410 (ENSFCAG00000040115) #30	TRPM2 (ENSFCAG00000009173) #31	LRRC3 (ENSFCAG00000009174) #32	ENSFCAG00000037433 ##37	ENSFCAG00000034182 #34	ENSFCAG00000046465 #36	ENSFCAG00000037983 ##37
Laurasiatheria_c	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Chiroptera	ANCESTRAL SPECIES	35	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.b ##37	ENSGT00940000163441.f.a.a.b #34	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Megabat	MODERN SPECIES	1683																AGPAT3 (ENSPVAG00000002310) #22	TRAPPC10 (ENSPVAG00000002311) #23	PWP2 (ENSPVAG00000002312) #24	GATD3 (ENSPVAG00000002313) #25
Microchiroptera	ANCESTRAL SPECIES	37	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.b ##37	ENSGT00940000163441.f.a.a.b #34	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Microbat	MODERN SPECIES	1228													ENSMLUG00000030154	ENSMLUG00000022457 #20	RRP1 (ENSMLUG00000017788) #21	AGPAT3 (ENSMLUG00000004785) #22	TRAPPC10 (ENSMLUG00000004810) #23	PWP2 (ENSMLUG00000004823) #24	GATD3 (ENSMLUG00000004837) #25	DNMT3L (ENSMLUG00000013954) #27	ENSMLUG00000010968 #28	PFKL (ENSMLUG00000010992) #29	CFAP410 (ENSMLUG00000011059) #30	TRPM2 (ENSMLUG00000011096) #31	LRRC3 (ENSMLUG00000011171) #32	TSPEAR (ENSMLUG00000011225) #33	ENSMLUG00000017019 ##37	ENSMLUG00000010897 ##37	ENSMLUG00000011524 #34	UBE2G2 (ENSMLUG00000011264)	ENSMLUG00000028601
Greater horseshoe bat	MODERN SPECIES	11	RSPH1 (ENSRFEG00010004627)	SLC37A1 (ENSRFEG00010004677)	PDE9A (ENSRFEG00010004823) #7	WDR4 (ENSRFEG00010004938) #8	NDUFV3 (ENSRFEG00010004952) #9	PKNOX1 (ENSRFEG00010000147) #10	CBS (ENSRFEG00010000170) #12	U2AF1 (ENSRFEG00010000191) #13	CRYAA (ENSRFEG00010000206) #14	SIK1 (ENSRFEG00010000222) #15	HSF2BP (ENSRFEG00010000255) #16	RRP1B (ENSRFEG00010000288) #18	PDXK (ENSRFEG00010000337) #19	CSTB (ENSRFEG00010000380) #20	RRP1 (ENSRFEG00010000411) #21	AGPAT3 (ENSRFEG00010000500) #22	TRAPPC10 (ENSRFEG00010000559) #23	PWP2 (ENSRFEG00010000602) #24	GATD3 (ENSRFEG00010000628) #25	ICOSLG (ENSRFEG00010000645) #26	DNMT3L (ENSRFEG00010000669) #27	AIRE (ENSRFEG00010000735) #28	PFKL (ENSRFEG00010000776) #29	CFAP410 (ENSRFEG00010000827) #30	TRPM2 (ENSRFEG00010000872) #31	LRRC3 (ENSRFEG00010000940) #32	TSPEAR (ENSRFEG00010000980) #33	ENSRFEG00010001026	ENSRFEG00010001114 #34	ENSRFEG00010001158	UBE2G2 (ENSRFEG00010001187)
Equus	ANCESTRAL SPECIES	42	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027.h #12	ENSGT00950000183152.B.c.a #13	ENSGT00510000047027.g #12	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.xb #20	ENSGT00940000154826.yb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Horse	MODERN SPECIES	18	PDE9A (ENSECAG00000017519) #7	WDR4 (ENSECAG00000019212) #8	NDUFV3 (ENSECAG00000003055) #9	PKNOX1 (ENSECAG00000010284) #10	ENSECAG00000046444	ENSECAG00000022794 #12	U2AF1 (ENSECAG00000015558) #13	ENSECAG00000021749 #12	SIK1 (ENSECAG00000006288) #15	HSF2BP (ENSECAG00000017282) #16	RRP1B (ENSECAG00000018018) #18	PDXK (ENSECAG00000022301) #19	ENSECAG00000034000 #20	ENSECAG00000032188 #20	RRP1 (ENSECAG00000015703) #21	AGPAT3 (ENSECAG00000022861) #22	TRAPPC10 (ENSECAG00000015123) #23	PWP2 (ENSECAG00000006090) #24	ENSECAG00000051827 #26	DNMT3L (ENSECAG00000009690) #27	AIRE (ENSECAG00000012924) #28	PFKL (ENSECAG00000017863) #29	TRPM2 (ENSECAG00000023430) #31	TSPEAR (ENSECAG00000008057) #30	LRRC3 (ENSECAG00000005082) #32	TSPEAR (ENSECAG00000051756) #33	ENSECAG00000029396	ENSECAG00000051909	ENSECAG00000051879	ENSECAG00000015117	ENSECAG00000047135
Donkey	MODERN SPECIES	9	WDR4 (ENSEASG00005003766) #8	NDUFV3 (ENSEASG00005003763) #9	ENSEASG00005038023 #12	ENSEASG00005038681	PKNOX1 (ENSEASG00005003760) #10	ENSEASG00005001773 #13	ENSEASG00005034585 #12	ENSEASG00005037746 #14	SIK1 (ENSEASG00005001719) #15	HSF2BP (ENSEASG00005001700) #16	RRP1B (ENSEASG00005001687) #18	PDXK (ENSEASG00005001679) #19	ENSEASG00005030216 #20	ENSEASG00005032279 #20	RRP1 (ENSEASG00005001673) #21	AGPAT3 (ENSEASG00005001667) #22	ENSEASG00005001663	TRAPPC10 (ENSEASG00005001657) #23	PWP2 (ENSEASG00005001651) #24	GATD3 (ENSEASG00005001648) #25	ENSEASG00005001644 #26	DNMT3L (ENSEASG00005001632) #27	AIRE (ENSEASG00005001620) #28	PFKL (ENSEASG00005001615) #29	CFAP410 (ENSEASG00005001598) #30	TRPM2 (ENSEASG00005000375) #31	ENSEASG00005035707 #32	ENSEASG00005033364	ENSEASG00005026527	ENSEASG00005037300	ENSEASG00005014722
Artiodactyla	ANCESTRAL SPECIES	2	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Artiodactyla_a	ANCESTRAL SPECIES	8	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Artiodactyla_b	ANCESTRAL SPECIES	6	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Cetacea	ANCESTRAL SPECIES	10	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196.a #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874.k #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Odontoceti	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196.a #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874.k #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Odontoceti_a	ANCESTRAL SPECIES	8	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196.a #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874.k #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Odontoceti_b	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196.a #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874.k #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196.a #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00940000163089.a.b	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874.k #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Beluga whale	MODERN SPECIES	111	SLC37A1 (ENSDLEG00000021092)	PDE9A (ENSDLEG00000021086) #7	WDR4 (ENSDLEG00000021081) #8	NDUFV3 (ENSDLEG00000021078) #9	PKNOX1 (ENSDLEG00000021076) #10	CBS (ENSDLEG00000021070) #12	U2AF1 (ENSDLEG00000021062) #13	CRYAA (ENSDLEG00000021056) #14	SIK1 (ENSDLEG00000021047) #15	ENSDLEG00000021045	HSF2BP (ENSDLEG00000021043) #16	RRP1B (ENSDLEG00000021037) #18	PDXK (ENSDLEG00000021031) #19	CSTB (ENSDLEG00000021029) #20	RRP1 (ENSDLEG00000021024) #21	AGPAT3 (ENSDLEG00000021021) #22	TRAPPC10 (ENSDLEG00000021015) #23	PWP2 (ENSDLEG00000021005) #24	GATD3 (ENSDLEG00000021000) #25	ICOSLG (ENSDLEG00000020998) #26	ENSDLEG00000020995 #27	AIRE (ENSDLEG00000020961) #28	PFKL (ENSDLEG00000020945) #29	CUNH21orf2 (ENSDLEG00000020939) #30	TRPM2 (ENSDLEG00000020923) #31	LRRC3 (ENSDLEG00000020917) #32	TSPEAR (ENSDLEG00000020913) #33	UBE2G2 (ENSDLEG00000020904)	ENSDLEG00000020900	PTTG1IP (ENSDLEG00000020895)	ITGB2 (ENSDLEG00000020885)
Narwhal	MODERN SPECIES	297	SLC37A1 (ENSMMNG00015002910)	PDE9A (ENSMMNG00015002827) #7	WDR4 (ENSMMNG00015002775) #8	NDUFV3 (ENSMMNG00015002750) #9	PKNOX1 (ENSMMNG00015002718) #10	CBS (ENSMMNG00015002675) #12	U2AF1 (ENSMMNG00015002628) #13	CRYAA (ENSMMNG00015002603) #14	SIK1 (ENSMMNG00015002567) #15	ENSMMNG00015002545	HSF2BP (ENSMMNG00015002511) #16	RRP1B (ENSMMNG00015002462) #18	PDXK (ENSMMNG00015002424) #19	CSTB (ENSMMNG00015002400) #20	RRP1 (ENSMMNG00015002366) #21	AGPAT3 (ENSMMNG00015002330) #22	TRAPPC10 (ENSMMNG00015002229) #23	PWP2 (ENSMMNG00015002118) #24	ENSMMNG00015002030 #25	ICOSLG (ENSMMNG00015001974) #26	DNMT3L (ENSMMNG00015001913) #27	AIRE (ENSMMNG00015001730) #28	PFKL (ENSMMNG00015001526) #29	CFAP410 (ENSMMNG00015001497) #30	TRPM2 (ENSMMNG00015001381) #31	TSPEAR (ENSMMNG00015001273) #33	UBE2G2 (ENSMMNG00015001235)	SUMO3 (ENSMMNG00015001196)	PTTG1IP (ENSMMNG00015001159)	ITGB2 (ENSMMNG00015001076)	SLX9 (ENSMMNG00015001036)
Vaquita	MODERN SPECIES	15	RSPH1 (ENSPSNG00000004899)	SLC37A1 (ENSPSNG00000004936)	PDE9A (ENSPSNG00000005243) #7	WDR4 (ENSPSNG00000005893) #8	NDUFV3 (ENSPSNG00000005932) #9	PKNOX1 (ENSPSNG00000006002) #10	CBS (ENSPSNG00000009906) #12	U2AF1 (ENSPSNG00000010054) #13	CRYAA (ENSPSNG00000010191) #14	SIK1 (ENSPSNG00000010236) #15	HSF2BP (ENSPSNG00000010294) #16	RRP1B (ENSPSNG00000010341) #18	ENSPSNG00000010404 #19	ENSPSNG00000010486 #20	RRP1 (ENSPSNG00000010522) #21	AGPAT3 (ENSPSNG00000010576) #22	TRAPPC10 (ENSPSNG00000010640) #23	PWP2 (ENSPSNG00000010734) #24	GATD3 (ENSPSNG00000010801) #25	ICOSLG (ENSPSNG00000010983) #26	DNMT3L (ENSPSNG00000011244) #27	AIRE (ENSPSNG00000011555) #28	PFKL (ENSPSNG00000012080) #29	CFAP410 (ENSPSNG00000012160) #30	TRPM2 (ENSPSNG00000012233) #31	LRRC3 (ENSPSNG00000012828) #32	TSPEAR (ENSPSNG00000012864) #33	UBE2G2 (ENSPSNG00000013185)	SUMO3 (ENSPSNG00000013255)	PTTG1IP (ENSPSNG00000013293)	ENSPSNG00000013374
Dolphin	MODERN SPECIES	1327													PDXK (ENSTTRG00000011152) #19	CSTB (ENSTTRG00000011158) #20	RRP1 (ENSTTRG00000011162) #21	AGPAT3 (ENSTTRG00000011171) #22
Sperm whale	MODERN SPECIES	19	TMPRSS3 (ENSPCTG00005008050)	UBASH3A (ENSPCTG00005008150)	RSPH1 (ENSPCTG00005008271)	SLC37A1 (ENSPCTG00005008374)	CBS (ENSPCTG00005008728) #12	PKNOX1 (ENSPCTG00005012441) #10	NDUFV3 (ENSPCTG00005012543) #9	WDR4 (ENSPCTG00005012622) #8	PDE9A (ENSPCTG00005012834) #7	HSF2BP (ENSPCTG00005014642) #16	RRP1B (ENSPCTG00005014769) #18	PDXK (ENSPCTG00005014904) #19	CSTB (ENSPCTG00005015015) #20	U2AF1 (ENSPCTG00005015178) #13	CRYAA (ENSPCTG00005015249) #14	AGPAT3 (ENSPCTG00005015313) #22	TRAPPC10 (ENSPCTG00005015440) #23	PWP2 (ENSPCTG00005015641) #24	GATD3A (ENSPCTG00005015921) #25	ICOSLG (ENSPCTG00005016088) #26	DNMT3L (ENSPCTG00005016240) #27	AIRE (ENSPCTG00005016581) #28	PFKL (ENSPCTG00005017230) #29	SUMO3 (ENSPCTG00005017367)	UBE2G2 (ENSPCTG00005017422)	TSPEAR (ENSPCTG00005017485) #33	ENSPCTG00005017543	ENSPCTG00005017608 #36	LRRC3 (ENSPCTG00005017660) #32	ENSPCTG00005017676 #31	ENSPCTG00005017771 #31
Blue whale	MODERN SPECIES	15	PDE9A (ENSBMSG00010006135) #7	WDR4 (ENSBMSG00010006556) #8	ENSBMSG00010006574 #9	PKNOX1 (ENSBMSG00010006599) #10	ENSBMSG00010006616	CBS (ENSBMSG00010006633) #12	U2AF1 (ENSBMSG00010006667) #13	CRYAA (ENSBMSG00010006694) #14	SIK1 (ENSBMSG00010006706) #15	HSF2BP (ENSBMSG00010006728) #16	ENSBMSG00010006743	RRP1B (ENSBMSG00010006765) #18	ENSBMSG00010006807 #19	ENSBMSG00010006834 #20	RRP1 (ENSBMSG00010006842) #21	AGPAT3 (ENSBMSG00010006864) #22	TRAPPC10 (ENSBMSG00010006876) #23	PWP2 (ENSBMSG00010006911) #24	GATD3 (ENSBMSG00010006949) #25	ICOSLG (ENSBMSG00010006991) #26	DNMT3L (ENSBMSG00010007028) #27	AIRE (ENSBMSG00010007103) #28	PFKL (ENSBMSG00010007189) #29	CFAP410 (ENSBMSG00010007203) #30	TRPM2 (ENSBMSG00010007233) #31	LRRC3 (ENSBMSG00010007273) #32	TSPEAR (ENSBMSG00010007281) #33	ENSBMSG00010007295	ENSBMSG00010007310 ##37	ENSBMSG00010007332	UBE2G2 (ENSBMSG00010007343)
Pecora	ANCESTRAL SPECIES	8	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Percora_a	ANCESTRAL SPECIES	7	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Bovidae	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Caprinae	ANCESTRAL SPECIES	8	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00940000154826.rb.a.a #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00510000047493.n	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.b.c.a.b.a.a.a.a ##37	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b ##37	ENSGT00940000163441.f.b.b.c.b ##37
Goat	MODERN SPECIES		WDR4 (ENSCHIG00000022834) #8	ENSCHIG00000025996 #9	PKNOX1 (ENSCHIG00000019819) #10	CBS (ENSCHIG00000010679) #12	U2AF1 (ENSCHIG00000012917) #13	CRYAA (ENSCHIG00000025002) #14	SIK1 (ENSCHIG00000013044) #15	ENSCHIG00000019627	HSF2BP (ENSCHIG00000005444) #16	RRP1B (ENSCHIG00000021519) #18	PDXK (ENSCHIG00000008616) #19	ENSCHIG00000023504 #20	ENSCHIG00000018248 #20	RRP1 (ENSCHIG00000020948) #21	ENSCHIG00000024677	AGPAT3 (ENSCHIG00000018991) #22	TRAPPC10 (ENSCHIG00000027168) #23	PWP2 (ENSCHIG00000026362) #24	GATD3 (ENSCHIG00000012627) #25	ICOSLG (ENSCHIG00000013703) #26	DNMT3L (ENSCHIG00000026242) #27	AIRE (ENSCHIG00000017506) #28	ENSCHIG00000023257	CFAP410 (ENSCHIG00000026049) #30	ENSCHIG00000009692	TRPM2 (ENSCHIG00000017585) #31	LRRC3 (ENSCHIG00000009418) #32	TSPEAR (ENSCHIG00000017708) #33	ENSCHIG00000011548 ##37	ENSCHIG00000014533 ##37	ENSCHIG00000017373 ##37
Rambouillet Sheep	MODERN SPECIES		UBASH3A (ENSOARG00020003453)	RSPH1 (ENSOARG00020003566)	SLC37A1 (ENSOARG00020003631)	PDE9A (ENSOARG00020003783) #7	WDR4 (ENSOARG00020005224) #8	NDUFV3 (ENSOARG00020005254) #9	PKNOX1 (ENSOARG00020005292) #10	CBS (ENSOARG00020005385) #12	U2AF1 (ENSOARG00020005608) #13	CRYAA (ENSOARG00020005666) #14	SIK1 (ENSOARG00020005689) #15	HSF2BP (ENSOARG00020005745) #16	PDXK (ENSOARG00020005802) #19	CSTB (ENSOARG00020005932) #20	RRP1 (ENSOARG00020005964) #21	AGPAT3 (ENSOARG00020005985) #22	ENSOARG00020006019	TRAPPC10 (ENSOARG00020006030) #23	PWP2 (ENSOARG00020006076) #24	GATD3A (ENSOARG00020006120) #25	ICOSLG (ENSOARG00020006191) #26	DNMT3L (ENSOARG00020006260) #27	AIRE (ENSOARG00020006405) #28	PFKL (ENSOARG00020006870) #29	CFAP410 (ENSOARG00020014376) #30	ENSOARG00020014423	TRPM2 (ENSOARG00020014481) #31	LRRC3 (ENSOARG00020014996) #32	TSPEAR (ENSOARG00020015029) #33	ENSOARG00020015156 ##37	ENSOARG00020006471 ##37
Bovinae	ANCESTRAL SPECIES	6	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Bos	ANCESTRAL SPECIES	7	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b ##37	ENSGT00940000163441.f.a.b.d ##37	ENSGT00940000158193
Bos_a	ANCESTRAL SPECIES	5	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.a.b ##37	ENSGT00940000163441.f.a.b.c.b ##37	ENSGT00960000187239.a
Domestic yak	MODERN SPECIES		RSPH1 (ENSBGRG00000018504)	SLC37A1 (ENSBGRG00000018757)	PDE9A (ENSBGRG00000019109) #7	WDR4 (ENSBGRG00000019836) #8	ENSBGRG00000019941 #9	PKNOX1 (ENSBGRG00000020052) #10	CBS (ENSBGRG00000020259) #12	U2AF1 (ENSBGRG00000020541) #13	CRYAA (ENSBGRG00000020662) #14	SIK1 (ENSBGRG00000020700) #15	HSF2BP (ENSBGRG00000020817) #16	RRP1B (ENSBGRG00000021030) #18	PDXK (ENSBGRG00000021296) #19	ENSBGRG00000021603 #20	RRP1 (ENSBGRG00000021680) #21	AGPAT3 (ENSBGRG00000021804) #22	TRAPPC10 (ENSBGRG00000021882) #23	PWP2 (ENSBGRG00000022101) #24	ENSBGRG00000022271 #25	ICOSLG (ENSBGRG00000022358) #26	DNMT3L (ENSBGRG00000022411) #27	AIRE (ENSBGRG00000022599) #28	ENSBGRG00000022818	PFKL (ENSBGRG00000022853) #29	CFAP410 (ENSBGRG00000023037) #30	TRPM2 (ENSBGRG00000023076) #31	LRRC3 (ENSBGRG00000023411) #32	TSPEAR (ENSBGRG00000023436) #33	ENSBGRG00000023540 ##37	ENSBGRG00000023556 ##37	ENSBGRG00000023571 ##37
Wild yak	MODERN SPECIES	2112	RSPH1 (ENSBMUG00000012341)	SLC37A1 (ENSBMUG00000012379)	PDE9A (ENSBMUG00000012397) #7	WDR4 (ENSBMUG00000012436) #8	ENSBMUG00000012491 #9	PKNOX1 (ENSBMUG00000012508) #10	CBS (ENSBMUG00000012649) #12	U2AF1 (ENSBMUG00000012755) #13	CRYAA (ENSBMUG00000012764) #14	SIK1 (ENSBMUG00000012772) #15	HSF2BP (ENSBMUG00000012808) #16	RRP1B (ENSBMUG00000012932) #18	PDXK (ENSBMUG00000013006) #19	ENSBMUG00000013071 #20	RRP1 (ENSBMUG00000013086) #21	AGPAT3 (ENSBMUG00000013195) #22	TRAPPC10 (ENSBMUG00000013261) #23	PWP2 (ENSBMUG00000013296) #24	GATD3 (ENSBMUG00000013327) #25	ENSBMUG00000013354 #26	DNMT3L (ENSBMUG00000013391) #27	ENSBMUG00000013414	AIRE (ENSBMUG00000013435) #28	PFKL (ENSBMUG00000013472) #29	CFAP410 (ENSBMUG00000013489) #30	TRPM2 (ENSBMUG00000013655) #31	LRRC3 (ENSBMUG00000013743) #32
Bos_b	ANCESTRAL SPECIES	5	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.rb.b #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT01100000265026	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.b.c.a ##37	ENSGT00940000163441.f.a.b.c.a.b.a.b.a.b.b ##37	ENSGT00940000163441.f.b.b.c.b ##37
Hybrid Bos Indicus	MODERN SPECIES		ENSBIXG00005021172	WDR4 (ENSBIXG00005007357) #8	ENSBIXG00005003567 #9	ENSBIXG00005021053	PKNOX1 (ENSBIXG00005021038) #10	CBS (ENSBIXG00005020947) #12	U2AF1 (ENSBIXG00005020822) #13	CRYAA (ENSBIXG00005020745) #14	ENSBIXG00005020712	SIK1 (ENSBIXG00005003495) #15	HSF2BP (ENSBIXG00005020613) #16	RRP1B (ENSBIXG00005020578) #18	PDXK (ENSBIXG00005020496) #19	ENSBIXG00005020433 #20	RRP1 (ENSBIXG00005020372) #21	AGPAT3 (ENSBIXG00005020333) #22	TRAPPC10 (ENSBIXG00005003407) #23	PWP2 (ENSBIXG00005003368) #24	ENSBIXG00005020156 #25	ICOSLG (ENSBIXG00005003278) #26	DNMT3L (ENSBIXG00005003270) #27	AIRE (ENSBIXG00005019950) #28	ENSBIXG00005019827	PFKL (ENSBIXG00005000029) #29	CFAP410 (ENSBIXG00005019772) #30	TRPM2 (ENSBIXG00005003229) #31	LRRC3 (ENSBIXG00005019626) #32	TSPEAR (ENSBIXG00005006878) #33	ENSBIXG00005019546 ##37	ENSBIXG00005019524 ##37	ENSBIXG00005019504 ##37
Cow	MODERN SPECIES		SLC37A1 (ENSBTAG00000021286)	PDE9A (ENSBTAG00000021899) #7	WDR4 (ENSBTAG00000021490) #8	NDUFV3 (ENSBTAG00000021491) #9	PKNOX1 (ENSBTAG00000014153) #10	CBS (ENSBTAG00000000160) #12	U2AF1 (ENSBTAG00000011645) #13	CRYAA (ENSBTAG00000003134) #14	SIK1 (ENSBTAG00000011437) #15	HSF2BP (ENSBTAG00000017407) #16	RRP1B (ENSBTAG00000017418) #18	PDXK (ENSBTAG00000018186) #19	CSTB (ENSBTAG00000018189) #20	CSTB (ENSBTAG00000000524) #20	RRP1 (ENSBTAG00000003981) #21	AGPAT3 (ENSBTAG00000020456) #22	TRAPPC10 (ENSBTAG00000007100) #23	PWP2 (ENSBTAG00000007105) #24	GATD3 (ENSBTAG00000007106) #25	ICOSLG (ENSBTAG00000014880) #26	DNMT3L (ENSBTAG00000014882) #27	AIRE (ENSBTAG00000023393) #28	ENSBTAG00000051579	PFKL (ENSBTAG00000010658) #29	CFAP410 (ENSBTAG00000019589) #30	TRPM2 (ENSBTAG00000021901) #31	LRRC3 (ENSBTAG00000017882) #32	TSPEAR (ENSBTAG00000018607) #33	ENSBTAG00000051900 ##37	ENSBTAG00000037662 ##37	ENSBTAG00000052773 ##37
American bison	MODERN SPECIES	2975	RSPH1 (ENSBBBG00000007983)	SLC37A1 (ENSBBBG00000014169)	PDE9A (ENSBBBG00000014410) #7	WDR4 (ENSBBBG00000014454) #8	NDUFV3 (ENSBBBG00000014463) #9	PKNOX1 (ENSBBBG00000003350) #10	CBS (ENSBBBG00000014597) #12	U2AF1 (ENSBBBG00000014640) #13	CRYAA (ENSBBBG00000014669) #14	SIK1 (ENSBBBG00000002847) #15	HSF2BP (ENSBBBG00000014691) #16	RRP1B (ENSBBBG00000003568) #18	PDXK (ENSBBBG00000003579) #19	CSTB (ENSBBBG00000007657) #20	RRP1 (ENSBBBG00000014788) #21	AGPAT3 (ENSBBBG00000003650) #22	TRAPPC10 (ENSBBBG00000007658) #23	PWP2 (ENSBBBG00000002805) #24	GATD3 (ENSBBBG00000014917) #25	ICOSLG (ENSBBBG00000001169) #26	DNMT3L (ENSBBBG00000001124) #27	AIRE (ENSBBBG00000000900) #28	PFKL (ENSBBBG00000000844) #29	CFAP410 (ENSBBBG00000000830) #30	TRPM2 (ENSBBBG00000015032) #31	LRRC3 (ENSBBBG00000003736) #32	ENSBBBG00000015050 ##37	ENSBBBG00000015056 ##37	ENSBBBG00000015061 ##37	ENSBBBG00000015080 ##37	ENSBBBG00000015083 ##37
Siberian musk deer	MODERN SPECIES	1185	SLC37A1 (ENSMMSG00000010340)	PDE9A (ENSMMSG00000010433) #7	ENSMMSG00000010748	WDR4 (ENSMMSG00000010788) #8	NDUFV3 (ENSMMSG00000010825) #9	PKNOX1 (ENSMMSG00000010868) #10	CBS (ENSMMSG00000010935) #12	U2AF1 (ENSMMSG00000011040) #13	CRYAA (ENSMMSG00000011127) #14	SIK1 (ENSMMSG00000011154) #15	HSF2BP (ENSMMSG00000011223) #16	RRP1B (ENSMMSG00000011269) #18	PDXK (ENSMMSG00000011339) #19	CSTB (ENSMMSG00000011422) #20	RRP1 (ENSMMSG00000011447) #21	AGPAT3 (ENSMMSG00000011502) #22	TRAPPC10 (ENSMMSG00000011550) #23	PWP2 (ENSMMSG00000011700) #24	GATD3 (ENSMMSG00000011811) #25	DNMT3L (ENSMMSG00000011908) #27	ENSMMSG00000012064	AIRE (ENSMMSG00000012088) #28	PFKL (ENSMMSG00000012144) #29	CFAP410 (ENSMMSG00000012203) #30	TRPM2 (ENSMMSG00000012263) #31	LRRC3 (ENSMMSG00000012592) #32	TSPEAR (ENSMMSG00000012606) #33	ENSMMSG00000012645 ##37	ENSMMSG00000012659 ##37	ENSMMSG00000012695	ENSMMSG00000012713
Yarkand deer	MODERN SPECIES	10	RSPH1 (ENSCHYG00000008397)	SLC37A1 (ENSCHYG00000008438)	PDE9A (ENSCHYG00000008513) #7	WDR4 (ENSCHYG00000008871) #8	NDUFV3 (ENSCHYG00000008999) #9	PKNOX1 (ENSCHYG00000009096) #10	CBS (ENSCHYG00000009317) #12	ENSCHYG00000009600 #13	CRYAA (ENSCHYG00000009789) #14	SIK1 (ENSCHYG00000009832) #15	HSF2BP (ENSCHYG00000009993) #16	RRP1B (ENSCHYG00000010070) #18	PDXK (ENSCHYG00000010189) #19	ENSCHYG00000010380 #20	RRP1 (ENSCHYG00000010447) #21	AGPAT3 (ENSCHYG00000010566) #22	TRAPPC10 (ENSCHYG00000010651) #23	PWP2 (ENSCHYG00000010992) #24	GATD3 (ENSCHYG00000011221) #25	ENSCHYG00000011375 #26	DNMT3L (ENSCHYG00000011454) #27	AIRE (ENSCHYG00000011590) #28	ENSCHYG00000011682	PFKL (ENSCHYG00000011737) #29	ENSCHYG00000012006 #30	TRPM2 (ENSCHYG00000012131) #31	LRRC3 (ENSCHYG00000012591) #32	TSPEAR (ENSCHYG00000012613) #33	ENSCHYG00000012689	ENSCHYG00000012727 ##37	ENSCHYG00000012743 ##37
Camelidae	ANCESTRAL SPECIES		ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.a.a.b #34	ENSGT00940000163441.f.a.b.c.a.a ##37	ENSGT00940000158193	ENSGT00950000182895.a.a.a.b.f
Arabian camel	MODERN SPECIES		SLC37A1 (ENSCDRG00005011351)	PDE9A (ENSCDRG00005011646) #7	WDR4 (ENSCDRG00005012149) #8	ENSCDRG00005012280 #9	PKNOX1 (ENSCDRG00005012370) #10	CBS (ENSCDRG00005012447) #12	U2AF1 (ENSCDRG00005012625) #13	CRYAA (ENSCDRG00005012871) #14	SIK1 (ENSCDRG00005012900) #15	HSF2BP (ENSCDRG00005013018) #16	RRP1B (ENSCDRG00005013083) #18	PDXK (ENSCDRG00005013153) #19	ENSCDRG00005013250 #20	RRP1 (ENSCDRG00005013286) #21	ENSCDRG00005013354	AGPAT3 (ENSCDRG00005013408) #22	TRAPPC10 (ENSCDRG00005013577) #23	PWP2 (ENSCDRG00005013718) #24	GATD3 (ENSCDRG00005013830) #25	ENSCDRG00005014322 #26	DNMT3L (ENSCDRG00005014446) #27	AIRE (ENSCDRG00005014671) #28	PFKL (ENSCDRG00005015587) #29	CFAP410 (ENSCDRG00005021870) #30	TRPM2 (ENSCDRG00005021872) #31	LRRC3 (ENSCDRG00005021874) #32	TSPEAR (ENSCDRG00005021875) #33	ENSCDRG00005021877 #34	ENSCDRG00005021878 ##37	UBE2G2 (ENSCDRG00005021880)	ENSCDRG00005021881
Suina	ANCESTRAL SPECIES	35	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505 #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490.m #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163441.f.b.b ##37	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Chacoan peccary	MODERN SPECIES	918										SIK1 (ENSCWAG00000021429) #15	HSF2BP (ENSCWAG00000021433) #16	RRP1B (ENSCWAG00000021439) #18	PDXK (ENSCWAG00000021452) #19	CSTB (ENSCWAG00000021465) #20	RRP1 (ENSCWAG00000021470) #21	AGPAT3 (ENSCWAG00000021478) #22	TRAPPC10 (ENSCWAG00000021486) #23	PWP2 (ENSCWAG00000021496) #24	GATD3 (ENSCWAG00000021510) #25	ICOSLG (ENSCWAG00000021521) #26	ENSCWAG00000021525 #27	AIRE (ENSCWAG00000021532) #28
Pig	MODERN SPECIES	4	PDE9A (ENSSSCG00000030016) #7	WDR4 (ENSSSCG00000023078) #8	ENSSSCG00000021991 #9	PKNOX1 (ENSSSCG00000037663) #10	CBS (ENSSSCG00000040779) #12	U2AF1 (ENSSSCG00000033653) #13	CRYAA (ENSSSCG00000038816) #14	SIK1 (ENSSSCG00000035037) #15	ENSSSCG00000045186	ENSSSCG00000022164 #16	RRP1B (ENSSSCG00000021698) #18	PDXK (ENSSSCG00000034758) #19	CSTB (ENSSSCG00000027357) #20	RRP1 (ENSSSCG00000037061) #21	ENSSSCG00000057666	AGPAT3 (ENSSSCG00000038081) #22	TRAPPC10 (ENSSSCG00000039085) #23	PWP2 (ENSSSCG00000029627) #24	GATD3 (ENSSSCG00000025525) #25	ENSSSCG00000022246 #26	DNMT3L (ENSSSCG00000028741) #27	AIRE (ENSSSCG00000025294) #28	PFKL (ENSSSCG00000028197) #29	CFAP410 (ENSSSCG00000024500) #30	TRPM2 (ENSSSCG00000023762) #31	LRRC3 (ENSSSCG00000053846) #32	TSPEAR (ENSSSCG00000022988) #33	ENSSSCG00000028768 ##37	ENSSSCG00000048449 ##37	ENSSSCG00000047309 ##37	ENSSSCG00000046681 ##37
Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258	ENSGT00940000158193
Primates	ANCESTRAL SPECIES	1	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258	ENSGT00940000158193
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163258.j	ENSGT00940000164049	ENSGT00940000163527	ENSGT00940000158579
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.b.a	ENSGT00940000163258.j	ENSGT00940000158579.l.b.b.b	ENSGT00940000163258.i.b
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.qb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT01020000234487	ENSGT00390000003873.v #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000158579.k	ENSGT00940000158579.l.a	ENSGT00940000163258.i.b
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	417																ENSANAG00000031608 #22	ENSANAG00000019650	NPAS2 (ENSANAG00000029045)	ENSANAG00000023888	TBC1D8 (ENSANAG00000003815)	ENSANAG00000031938	CNOT11 (ENSANAG00000028092)	RNF149 (ENSANAG00000031925)	CREG2 (ENSANAG00000036025)
Mas night monkey	MODERN SPECIES	1376	SLC37A1 (ENSANAG00000028307)	PDE9A (ENSANAG00000037833) #7	WDR4 (ENSANAG00000026274) #8	NDUFV3 (ENSANAG00000026013) #9	PKNOX1 (ENSANAG00000022045) #10	CBS (ENSANAG00000032848) #12	ENSANAG00000026034 #13	CRYAA (ENSANAG00000021687) #14	SIK1 (ENSANAG00000038083) #15	HSF2BP (ENSANAG00000037216) #16	RRP1B (ENSANAG00000034889) #18	ENSANAG00000033810	PDXK (ENSANAG00000019464) #19	ENSANAG00000038089 #20	RRP1 (ENSANAG00000037815) #21	ENSANAG00000036034 #22	ENSANAG00000035921	TRAPPC10 (ENSANAG00000032975) #23	PWP2 (ENSANAG00000034845) #24	GATD3 (ENSANAG00000032510) #25	ENSANAG00000031721 #26	DNMT3L (ENSANAG00000027897) #27	AIRE (ENSANAG00000031045) #28	PFKL (ENSANAG00000022126) #29	CFAP410 (ENSANAG00000021390) #30	TRPM2 (ENSANAG00000034661) #31	TSPEAR (ENSANAG00000032724) #33	ENSANAG00000032475	ENSANAG00000028487	ENSANAG00000027667	ENSANAG00000027010
Cebidae	ANCESTRAL SPECIES	32	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.qb #20	ENSGT00860000135708	ENSGT00940000154826.pb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT01020000234487	ENSGT00390000003873.v #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000158579.k	ENSGT00940000158579.l.a	ENSGT00940000163258.i.b	ENSGT00940000163845.c
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196.m #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.qb #20	ENSGT00860000135708	ENSGT00940000154826.pb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000016927.z	ENSGT00390000003873.v #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000158579.k	ENSGT00940000158579.l.a	ENSGT00940000163258.i.b	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.b
Bolivian squirrel monkey	MODERN SPECIES	66	PDE9A (ENSSBOG00000027099) #7	WDR4 (ENSSBOG00000026351) #8	NDUFV3 (ENSSBOG00000019466) #9	ENSSBOG00000004329	PKNOX1 (ENSSBOG00000018950) #10	CBS (ENSSBOG00000022215) #12	U2AF1 (ENSSBOG00000027084) #13	CRYAA (ENSSBOG00000026135) #14	SIK1 (ENSSBOG00000033825) #15	HSF2BP (ENSSBOG00000031228) #16	RRP1B (ENSSBOG00000034727) #18	ENSSBOG00000033475	PDXK (ENSSBOG00000023925) #19	ENSSBOG00000021578 #20	RRP1 (ENSSBOG00000034689) #21	AGPAT3 (ENSSBOG00000026342) #22	TRAPPC10 (ENSSBOG00000018376) #23	PWP2 (ENSSBOG00000034554) #24	GATD3 (ENSSBOG00000033759) #25	ICOSLG (ENSSBOG00000031169) #26	DNMT3L (ENSSBOG00000030998) #27	AIRE (ENSSBOG00000027491) #28	PFKL (ENSSBOG00000024155) #29	CFAP410 (ENSSBOG00000022331) #30	TRPM2 (ENSSBOG00000023964) #31	ENSSBOG00000030908	ENSSBOG00000029917	ENSSBOG00000025216	ENSSBOG00000027330	ENSSBOG00000034072	ENSSBOG00000033182
Capuchin	MODERN SPECIES	112	ENSCCAG00000033172	PDE9A (ENSCCAG00000001044) #7	WDR4 (ENSCCAG00000022755) #8	ENSCCAG00000022392 #9	PKNOX1 (ENSCCAG00000022902) #10	CBS (ENSCCAG00000032722) #12	U2AF1 (ENSCCAG00000036938) #13	CRYAA (ENSCCAG00000030217) #14	SIK1 (ENSCCAG00000028295) #15	HSF2BP (ENSCCAG00000031814) #16	RRP1B (ENSCCAG00000029384) #18	ENSCCAG00000001912	PDXK (ENSCCAG00000035149) #19	ENSCCAG00000030098 #20	RRP1 (ENSCCAG00000029828) #21	AGPAT3 (ENSCCAG00000035106) #22	ENSCCAG00000022399	TRAPPC10 (ENSCCAG00000028731) #23	PWP2 (ENSCCAG00000034616) #24	GATD3 (ENSCCAG00000023616) #25	ICOSLG (ENSCCAG00000034711) #26	DNMT3L (ENSCCAG00000028251) #27	AIRE (ENSCCAG00000033062) #28	PFKL (ENSCCAG00000023028) #29	CFAP410 (ENSCCAG00000019718) #30	TRPM2 (ENSCCAG00000035480) #31	ENSCCAG00000022693	ENSCCAG00000031995	ENSCCAG00000012157	ENSCCAG00000027045	ENSCCAG00000032996
Marmoset	MODERN SPECIES	13	RSPH1 (ENSCJAG00000005333)	SLC37A1 (ENSCJAG00000005291)	PDE9A (ENSCJAG00000085834) #7	WDR4 (ENSCJAG00000015778) #8	NDUFV3 (ENSCJAG00000015786) #9	PKNOX1 (ENSCJAG00000040086) #10	CBS (ENSCJAG00000015824) #12	U2AF1 (ENSCJAG00000015843) #13	CRYAA (ENSCJAG00000070733) #14	SIK1 (ENSCJAG00000015879) #15	HSF2BP (ENSCJAG00000059885) #16	RRP1B (ENSCJAG00000017077) #18	ENSCJAG00000043205 #19	ENSCJAG00000071745 #20	ENSCJAG00000052744	AGPAT3 (ENSCJAG00000086643) #22	ENSCJAG00000080531	TRAPPC10 (ENSCJAG00000005608) #23	PWP2 (ENSCJAG00000005570) #24	GATD3 (ENSCJAG00000005560) #25	ICOSLG (ENSCJAG00000003576) #26	DNMT3L (ENSCJAG00000087076) #27	AIRE (ENSCJAG00000013748) #28	PFKL (ENSCJAG00000017630) #29	CFAP410 (ENSCJAG00000017611) #30	TRPM2 (ENSCJAG00000073600) #31	LRRC3 (ENSCJAG00000081918) #32	TSPEAR (ENSCJAG00000015329) #33	ENSCJAG00000046358	KRTAP10-3 (ENSCJAG00000077838)	ENSCJAG00000041374
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.b.a	ENSGT00940000163258.j
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.nb #20	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.f
Rhinopithecus	ANCESTRAL SPECIES	270									ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00910000147958	ENSGT00860000135708	ENSGT00390000003874 #19	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.f
Black snub-nosed monkey	MODERN SPECIES	924									HSF2BP (ENSRBIG00000038854) #16	RRP1B (ENSRBIG00000041689) #18	ENSRBIG00000028564	ENSRBIG00000024778	PDXK (ENSRBIG00000022396) #19	ENSRBIG00000032395 #20	RRP1 (ENSRBIG00000032082) #21	AGPAT3 (ENSRBIG00000029812) #22	TRAPPC10 (ENSRBIG00000029157) #23	PWP2 (ENSRBIG00000034365) #24	GATD3 (ENSRBIG00000040907) #25	ICOSLG (ENSRBIG00000042775) #26	DNMT3L (ENSRBIG00000029101) #27	AIRE (ENSRBIG00000034675) #28	PFKL (ENSRBIG00000024591) #29	CFAP410 (ENSRBIG00000036434) #30	TRPM2 (ENSRBIG00000042457) #31	LRRC3 (ENSRBIG00000013619) #32	ENSRBIG00000013411	KRTAP10-2 (ENSRBIG00000029279)	ENSRBIG00000039496	ENSRBIG00000029901	ENSRBIG00000040008
Golden snub-nosed monkey	MODERN SPECIES	1362									HSF2BP (ENSRROG00000032823) #16	RRP1B (ENSRROG00000031499) #18	PDXK (ENSRROG00000044416) #19	ENSRROG00000030459	ENSRROG00000042411	CSTB (ENSRROG00000038574) #20	RRP1 (ENSRROG00000039799) #21	AGPAT3 (ENSRROG00000031040) #22	ENSRROG00000032758	TRAPPC10 (ENSRROG00000043895) #23	PWP2 (ENSRROG00000031946) #24	GATD3 (ENSRROG00000034542) #25
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.nb.a.b #20	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j.b
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00390000012196 #9	ENSGT01000000215029.c	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00910000147350	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.a	ENSGT00940000163845.c
Macaca	ANCESTRAL SPECIES	3	ENSGT01000000215029.c	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00910000147350	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.ob #20	ENSGT00860000135708	ENSGT00940000154826.nb.b #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000158579.l.a	ENSGT00940000158579.l.b.b.a.e	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.a	ENSGT00940000163845.c
Pig-tailed macaque	MODERN SPECIES	503	WDR4 (ENSMNEG00000033682) #8	NDUFV3 (ENSMNEG00000031842) #9	ERVH48-1 (ENSMNEG00000016913)	PKNOX1 (ENSMNEG00000035609) #10	CBS (ENSMNEG00000039488) #12	U2AF1 (ENSMNEG00000030283) #13	CRYAA (ENSMNEG00000005656) #14	SIK1 (ENSMNEG00000033778) #15	ENSMNEG00000025872	HSF2BP (ENSMNEG00000038532) #16	RRP1B (ENSMNEG00000034269) #18	ENSMNEG00000041372	PDXK (ENSMNEG00000045284) #19	CSTB (ENSMNEG00000029992) #20	RRP1 (ENSMNEG00000031210) #21	AGPAT3 (ENSMNEG00000033756) #22	TRAPPC10 (ENSMNEG00000033526) #23	PWP2 (ENSMNEG00000030782) #24	GATD3 (ENSMNEG00000038785) #25	ICOSLG (ENSMNEG00000029638) #26	DNMT3L (ENSMNEG00000042190) #27	AIRE (ENSMNEG00000011508) #28	PFKL (ENSMNEG00000032421) #29	CFAP410 (ENSMNEG00000034463) #30	TRPM2 (ENSMNEG00000027827) #31	LRRC3 (ENSMNEG00000021603) #32	ENSMNEG00000040527	ENSMNEG00000033060	ENSMNEG00000030729	ENSMNEG00000036953	ENSMNEG00000037098
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029.c	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00910000147350	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845.d	ENSGT00940000158579.l.b.b.a.e	ENSGT00940000158579.l.b.a	ENSGT00940000163258.i.b	ENSGT00940000164049.b.a
Rhesus	MODERN SPECIES	13	SLC37A1 (ENSMMUG00000018085)	PDE9A (ENSMMUG00000022107) #7	WDR4 (ENSMMUG00000062729) #8	NDUFV3 (ENSMMUG00000001553) #9	ENSMMUG00000044879	PKNOX1 (ENSMMUG00000009288) #10	CBS (ENSMMUG00000009289) #12	U2AF1 (ENSMMUG00000022769) #13	CRYAA (ENSMMUG00000020271) #14	SIK1 (ENSMMUG00000020050) #15	HSF2BP (ENSMMUG00000022791) #16	RRP1B (ENSMMUG00000000104) #18	PDXK (ENSMMUG00000062457) #19	CSTB (ENSMMUG00000012303) #20	RRP1 (ENSMMUG00000012304) #21	AGPAT3 (ENSMMUG00000045179) #22	TRAPPC10 (ENSMMUG00000005269) #23	PWP2 (ENSMMUG00000005271) #24	GATD3 (ENSMMUG00000005272) #25	ICOSLG (ENSMMUG00000010647) #26	DNMT3L (ENSMMUG00000010648) #27	AIRE (ENSMMUG00000004168) #28	PFKL (ENSMMUG00000004173) #29	CFAP410 (ENSMMUG00000049578) #30	TRPM2 (ENSMMUG00000004175) #31	LRRC3 (ENSMMUG00000049755) #32	KRTAP10-10 (ENSMMUG00000022559)	ENSMMUG00000022558	ENSMMUG00000030497	KRTAP10-8 (ENSMMUG00000048049)	KRTAP10-9 (ENSMMUG00000043221)
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000051957	PKNOX1 (ENSMFAG00000039213) #10	ENSMFAG00000063594	CBS (ENSMFAG00000038794) #12	ENSMFAG00000032317 #13	CRYAA (ENSMFAG00000036551) #14	SIK1 (ENSMFAG00000032324) #15	ENSMFAG00000063691	HSF2BP (ENSMFAG00000041607) #16	RRP1B (ENSMFAG00000039152) #18	ENSMFAG00000056006	PDXK (ENSMFAG00000042485) #19	CSTB (ENSMFAG00000061351) #20	RRP1 (ENSMFAG00000003202) #21	ENSMFAG00000057571	ENSMFAG00000053688 #22	TRAPPC10 (ENSMFAG00000041704) #23	PWP2 (ENSMFAG00000044448) #24	GATD3 (ENSMFAG00000046334) #25	ICOSLG (ENSMFAG00000040533) #26	DNMT3L (ENSMFAG00000046145) #27	AIRE (ENSMFAG00000001488) #28	PFKL (ENSMFAG00000037062) #29	CFAP410 (ENSMFAG00000049270) #30	TRPM2 (ENSMFAG00000001773) #31	LRRC3 (ENSMFAG00000028969) #32	KRTAP10-4 (ENSMFAG00000031679)	KRTAP10-9 (ENSMFAG00000053657)	KRTAP10-7 (ENSMFAG00000051280)	TSPEAR (ENSMFAG00000001348) #33	UBE2G2 (ENSMFAG00000057431)
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029.c	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00910000147350	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.a	ENSGT00940000158579.l.b.a
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029.c	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a.ge #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00910000147350	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.f
Drill	MODERN SPECIES	1420	WDR4 (ENSMLEG00000042177) #8	NDUFV3 (ENSMLEG00000042871) #9	ERVH48-1 (ENSMLEG00000001600)	PKNOX1 (ENSMLEG00000037117) #10	CBS (ENSMLEG00000041980) #12	ENSMLEG00000029446 #13	CRYAA (ENSMLEG00000039416) #14	SIK1 (ENSMLEG00000030826) #15	ENSMLEG00000034490	HSF2BP (ENSMLEG00000042323) #16	RRP1B (ENSMLEG00000040044) #18	ENSMLEG00000002822	PDXK (ENSMLEG00000015398) #19	ENSMLEG00000031224 #20	RRP1 (ENSMLEG00000037797) #21	AGPAT3 (ENSMLEG00000033816) #22	ENSMLEG00000026219	TRAPPC10 (ENSMLEG00000027219) #23	PWP2 (ENSMLEG00000039860) #24	GATD3 (ENSMLEG00000027477) #25	ICOSLG (ENSMLEG00000043829) #26	DNMT3L (ENSMLEG00000041399) #27	AIRE (ENSMLEG00000026732) #28	PFKL (ENSMLEG00000030281) #29	CFAP410 (ENSMLEG00000038505) #30	TRPM2 (ENSMLEG00000009280) #31	LRRC3 (ENSMLEG00000001984) #32	ENSMLEG00000040298	ENSMLEG00000031061	TSPEAR (ENSMLEG00000035979) #33	ENSMLEG00000034784
Sooty mangabey	MODERN SPECIES	465	PDE9A (ENSCATG00000039788) #7	WDR4 (ENSCATG00000042955) #8	NDUFV3 (ENSCATG00000043099) #9	ERVH48-1 (ENSCATG00000032142)	PKNOX1 (ENSCATG00000033829) #10	CBS (ENSCATG00000037956) #12	ENSCATG00000044934 #13	CRYAA (ENSCATG00000044220) #14	SIK1 (ENSCATG00000037666) #15	ENSCATG00000015361	HSF2BP (ENSCATG00000041814) #16	RRP1B (ENSCATG00000017423) #18	PDXK (ENSCATG00000037302) #19	ENSCATG00000042137 #20	RRP1 (ENSCATG00000015632) #21	AGPAT3 (ENSCATG00000027955) #22	ENSCATG00000034946	TRAPPC10 (ENSCATG00000014984) #23	ENSCATG00000037979	PWP2 (ENSCATG00000032550) #24	GATD3 (ENSCATG00000021742) #25	ICOSLG (ENSCATG00000023031) #26	DNMT3L (ENSCATG00000034363) #27	AIRE (ENSCATG00000034405) #28	PFKL (ENSCATG00000038502) #29	CFAP410 (ENSCATG00000040484) #30	TRPM2 (ENSCATG00000034197) #31	LRRC3 (ENSCATG00000017064) #32	TSPEAR (ENSCATG00000034984) #33	ENSCATG00000041458	ENSCATG00000041080
Vervet Monkey	MODERN SPECIES	11	SLC37A1 (ENSCSAG00000008088)	ENSCSAG00000008076	PDE9A (ENSCSAG00000008068) #7	WDR4 (ENSCSAG00000008058) #8	NDUFV3 (ENSCSAG00000008049) #9	PKNOX1 (ENSCSAG00000008042) #10	CBS (ENSCSAG00000008036) #12	U2AF1 (ENSCSAG00000008019) #13	CRYAA (ENSCSAG00000007988) #14	SIK1 (ENSCSAG00000007979) #15	HSF2BP (ENSCSAG00000007970) #16	RRP1B (ENSCSAG00000007961) #18	PDXK (ENSCSAG00000007949) #19	ENSCSAG00000007941 #20	RRP1 (ENSCSAG00000007936) #21	AGPAT3 (ENSCSAG00000007926) #22	TRAPPC10 (ENSCSAG00000007920) #23	PWP2 (ENSCSAG00000007903) #24	GATD3 (ENSCSAG00000007892) #25	ENSCSAG00000007887	ICOSLG (ENSCSAG00000007876) #26	DNMT3L (ENSCSAG00000007863) #27	AIRE (ENSCSAG00000007836) #28	PFKL (ENSCSAG00000007817) #29	CFAP410 (ENSCSAG00000007805) #30	TRPM2 (ENSCSAG00000007727) #31	LRRC3 (ENSCSAG00000000277) #32	TSPEAR (ENSCSAG00000007591) #33	ENSCSAG00000007568	KRTAP10-3 (ENSCSAG00000007561)	KRTAP10-4 (ENSCSAG00000007551)
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163258.j	ENSGT00940000158579.l.b.b.b
Hominidae	ANCESTRAL SPECIES	25	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000167184	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.b.a.d	ENSGT00940000163258.j
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000167184	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.b.b.a.d	ENSGT00940000163258.j
Gorilla	MODERN SPECIES	12	SLC37A1 (ENSGGOG00000012067)	PDE9A (ENSGGOG00000014263) #7	WDR4 (ENSGGOG00000016652) #8	NDUFV3 (ENSGGOG00000014547) #9	ERVH48-1 (ENSGGOG00000037204)	PKNOX1 (ENSGGOG00000013783) #10	CBS (ENSGGOG00000010251) #12	ENSGGOG00000038883	CRYAA (ENSGGOG00000010345) #14	SIK1 (ENSGGOG00000007792) #15	HSF2BP (ENSGGOG00000012059) #16	RRP1B (ENSGGOG00000012069) #18	PDXK (ENSGGOG00000003904) #19	CSTB (ENSGGOG00000024406) #20	RRP1 (ENSGGOG00000000173) #21	AGPAT3 (ENSGGOG00000043336) #22	ENSGGOG00000044032	TRAPPC10 (ENSGGOG00000010716) #23	PWP2 (ENSGGOG00000041875) #24	GATD3 (ENSGGOG00000041897) #25	ENSGGOG00000012425 #26	DNMT3L (ENSGGOG00000012431) #27	AIRE (ENSGGOG00000005672) #28	PFKL (ENSGGOG00000005687) #29	ENSGGOG00000005702 #30	TRPM2 (ENSGGOG00000008410) #31	LRRC3 (ENSGGOG00000008435) #32	TSPEAR (ENSGGOG00000002047) #33	ENSGGOG00000039833	ENSGGOG00000040198	KRTAP10-7 (ENSGGOG00000044027)
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000167184	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.a	ENSGT00940000158579.l.b.b.a.c	ENSGT00940000164049.b.b
Pan	ANCESTRAL SPECIES	27	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT01000000215029	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000167184	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579.l.a	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.c
Chimpanzee	MODERN SPECIES	12	PDE9A (ENSPTRG00000013946) #7	WDR4 (ENSPTRG00000013948) #8	NDUFV3 (ENSPTRG00000047245) #9	ERVH48-1 (ENSPTRG00000051369)	PKNOX1 (ENSPTRG00000013950) #10	CBS (ENSPTRG00000013951) #12	ENSPTRG00000013952 #13	ENSPTRG00000044914	CRYAA (ENSPTRG00000013953) #14	SIK1 (ENSPTRG00000013954) #15	HSF2BP (ENSPTRG00000013957) #16	RRP1B (ENSPTRG00000013958) #18	PDXK (ENSPTRG00000040962) #19	CSTB (ENSPTRG00000048077) #20	RRP1 (ENSPTRG00000013962) #21	AGPAT3 (ENSPTRG00000042805) #22	TRAPPC10 (ENSPTRG00000013968) #23	ENSPTRG00000048335	PWP2 (ENSPTRG00000013969) #24	GATD3 (ENSPTRG00000047816) #25	ENSPTRG00000013972 #26	DNMT3L (ENSPTRG00000013973) #27	AIRE (ENSPTRG00000013974) #28	PFKL (ENSPTRG00000022972) #29	CFAP410 (ENSPTRG00000013976) #30	TRPM2 (ENSPTRG00000013977) #31	LRRC3 (ENSPTRG00000013978) #32	TSPEAR (ENSPTRG00000013980) #33	KRTAP10-2 (ENSPTRG00000013982)	ENSPTRG00000046656	KRTAP10-5 (ENSPTRG00000031415)
Bonobo	MODERN SPECIES	12	PDE9A (ENSPPAG00000027576) #7	WDR4 (ENSPPAG00000038150) #8	NDUFV3 (ENSPPAG00000016184) #9	ERVH48-1 (ENSPPAG00000006329)	PKNOX1 (ENSPPAG00000027586) #10	CBS (ENSPPAG00000042865) #12	U2AF1 (ENSPPAG00000000845) #13	ENSPPAG00000026875	CRYAA (ENSPPAG00000034607) #14	SIK1 (ENSPPAG00000034814) #15	HSF2BP (ENSPPAG00000034999) #16	RRP1B (ENSPPAG00000035319) #18	PDXK (ENSPPAG00000020347) #19	ENSPPAG00000028631 #20	RRP1 (ENSPPAG00000029050) #21	AGPAT3 (ENSPPAG00000029344) #22	TRAPPC10 (ENSPPAG00000030751) #23	ENSPPAG00000035184	PWP2 (ENSPPAG00000037874) #24	GATD3 (ENSPPAG00000030535) #25	ENSPPAG00000036658 #26	DNMT3L (ENSPPAG00000041935) #27	AIRE (ENSPPAG00000018145) #28	PFKL (ENSPPAG00000028154) #29	ENSPPAG00000033399 #30	TRPM2 (ENSPPAG00000036474) #31	LRRC3 (ENSPPAG00000006087) #32	TSPEAR (ENSPPAG00000027981) #33	ENSPPAG00000029414	ENSPPAG00000029990	ENSPPAG00000030230
Human	MODERN SPECIES	13	PDE9A (ENSG00000160191) #7	WDR4 (ENSG00000160193) #8	NDUFV3 (ENSG00000160194) #9	ERVH48-1 (ENSG00000233056)	PKNOX1 (ENSG00000160199) #10	CBS (ENSG00000160200) #12	U2AF1 (ENSG00000160201) #13	CRYAA (ENSG00000160202) #14	SIK1 (ENSG00000142178) #15	HSF2BP (ENSG00000160207) #16	H2BC12L (ENSG00000234289)	RRP1B (ENSG00000160208) #18	PDXK (ENSG00000160209) #19	CSTB (ENSG00000160213) #20	RRP1 (ENSG00000160214) #21	AGPAT3 (ENSG00000160216) #22	ENSG00000288593	TRAPPC10 (ENSG00000160218) #23	PWP2 (ENSG00000241945) #24	GATD3 (ENSG00000160221) #25	ICOSLG (ENSG00000160223) #26	DNMT3L (ENSG00000142182) #27	AIRE (ENSG00000160224) #28	PFKL (ENSG00000141959) #29	CFAP410 (ENSG00000160226) #30	TRPM2 (ENSG00000142185) #31	LRRC3 (ENSG00000160233) #32	TSPEAR (ENSG00000175894) #33	KRTAP10-1 (ENSG00000215455)	KRTAP10-2 (ENSG00000205445)	KRTAP10-3 (ENSG00000212935)
Orangutan	MODERN SPECIES	12	NDUFV3 (ENSPPYG00000011459) #9	ERVH48-1 (ENSPPYG00000032563)	PKNOX1 (ENSPPYG00000011461) #10	ENSPPYG00000041500	CBS (ENSPPYG00000011462) #12	U2AF1 (ENSPPYG00000011463) #13	ENSPPYG00000040498	ENSPPYG00000011465 #14	SIK1 (ENSPPYG00000011466) #15	ENSPPYG00000011469 #16	RRP1B (ENSPPYG00000011470) #18	PDXK (ENSPPYG00000019998) #19	CSTB (ENSPPYG00000036267) #20	RRP1 (ENSPPYG00000011474) #21	ENSPPYG00000034644	AGPAT3 (ENSPPYG00000011476) #22	ENSPPYG00000036566	TRAPPC10 (ENSPPYG00000011477) #23	PWP2 (ENSPPYG00000011478) #24	ENSPPYG00000011479 #25	ICOSLG (ENSPPYG00000011481) #26	DNMT3L (ENSPPYG00000035139) #27	AIRE (ENSPPYG00000011482) #28	PFKL (ENSPPYG00000011483) #29	ENSPPYG00000041331 #30	TRPM2 (ENSPPYG00000011485) #31	LRRC3 (ENSPPYG00000011486) #32	TSPEAR (ENSPPYG00000011488) #33	KRTAP10-3 (ENSPPYG00000037806)	ENSPPYG00000039780	KRTAP10-5 (ENSPPYG00000011492)
Gibbon	MODERN SPECIES	17	NDUFV3 (ENSNLEG00000014663) #9	ERVH48-1 (ENSNLEG00000027799)	PKNOX1 (ENSNLEG00000014675) #10	CBS (ENSNLEG00000029685) #12	U2AF1 (ENSNLEG00000030710) #13	ENSNLEG00000033479	CRYAA (ENSNLEG00000014752) #14	SIK1 (ENSNLEG00000001409) #15	HSF2BP (ENSNLEG00000034577) #16	RRP1B (ENSNLEG00000001490) #18	PDXK (ENSNLEG00000001565) #19	ENSNLEG00000028797	ENSNLEG00000001583 #20	RRP1 (ENSNLEG00000034734) #21	ENSNLEG00000033631	AGPAT3 (ENSNLEG00000001755) #22	TRAPPC10 (ENSNLEG00000001820) #23	ENSNLEG00000029247	PWP2 (ENSNLEG00000001928) #24	GATD3 (ENSNLEG00000033634) #25	ENSNLEG00000033148 #26	DNMT3L (ENSNLEG00000002093) #27	ENSNLEG00000027646 #28	PFKL (ENSNLEG00000002171) #29	ENSNLEG00000002219 #30	ENSNLEG00000002224 #31	TSPEAR (ENSNLEG00000002263) #33	KRTAP10-2 (ENSNLEG00000027209)	KRTAP10-3 (ENSNLEG00000026713)	ENSNLEG00000027551	KRTAP10-5 (ENSNLEG00000026989)
Tarsier	MODERN SPECIES	4156																AGPAT3 (ENSTSYG00000013680) #22	TRAPPC10 (ENSTSYG00000009018) #23	PWP2 (ENSTSYG00000009022) #24	GATD3 (ENSTSYG00000013874) #25
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000164049	ENSGT00940000163527	ENSGT00940000158579	ENSGT00940000163258	ENSGT00940000163441.f.a.a.a #37	ENSGT00940000154360.A.b #32
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000163527.a	ENSGT00940000158579	ENSGT00940000163258	ENSGT00940000163441.f.a.a.a #37	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33
Lemuriformes_a	ANCESTRAL SPECIES	183											ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000163527.a	ENSGT00940000158579	ENSGT00940000163258	ENSGT00940000163441.f.a.a.a #37	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33
Coquerels sifaka	MODERN SPECIES	860																ENSPCOG00000017034 #22	TRAPPC10 (ENSPCOG00000023846) #23	PWP2 (ENSPCOG00000012856) #24	GATD3 (ENSPCOG00000007721) #25	ICOSLG (ENSPCOG00000022096) #26	DNMT3L (ENSPCOG00000022179) #27	AIRE (ENSPCOG00000025712) #28	PFKL (ENSPCOG00000008346) #29	CFAP410 (ENSPCOG00000015158) #30	TRPM2 (ENSPCOG00000000159) #31	ENSPCOG00000015036	ENSPCOG00000020643	TSPEAR (ENSPCOG00000019364) #33	ENSPCOG00000012194 #37	ENSPCOG00000017762	ENSPCOG00000020795
Greater bamboo lemur	MODERN SPECIES	618										HSF2BP (ENSPSMG00000000840) #16	RRP1B (ENSPSMG00000000878) #18	PDXK (ENSPSMG00000000981) #19	CSTB (ENSPSMG00000001087) #20	RRP1 (ENSPSMG00000001127) #21	ENSPSMG00000001142	AGPAT3 (ENSPSMG00000001184) #22	ENSPSMG00000001203	TRAPPC10 (ENSPSMG00000001308) #23	PWP2 (ENSPSMG00000001395) #24	ENSPSMG00000001422 #25	ICOSLG (ENSPSMG00000001460) #26	DNMT3L (ENSPSMG00000001478) #27	AIRE (ENSPSMG00000001491) #28	PFKL (ENSPSMG00000001565) #29	TRPM2 (ENSPSMG00000001756) #31	LRRC3 (ENSPSMG00000001980) #32	TSPEAR (ENSPSMG00000002016) #33	ENSPSMG00000002079	ENSPSMG00000002099	ENSPSMG00000002110
Mouse lemur	MODERN SPECIES	24	PDE9A (ENSMICG00000016258) #7	WDR4 (ENSMICG00000042106) #8	NDUFV3 (ENSMICG00000046617) #9	PKNOX1 (ENSMICG00000037878) #10	CBS (ENSMICG00000041663) #12	U2AF1 (ENSMICG00000013835) #13	CRYAA (ENSMICG00000035380) #14	ENSMICG00000035845	ENSMICG00000029407	SIK1 (ENSMICG00000000552) #15	HSF2BP (ENSMICG00000004680) #16	RRP1B (ENSMICG00000004686) #18	PDXK (ENSMICG00000004696) #19	CSTB (ENSMICG00000031601) #20	RRP1 (ENSMICG00000004700) #21	AGPAT3 (ENSMICG00000047320) #22	TRAPPC10 (ENSMICG00000000992) #23	PWP2 (ENSMICG00000001002) #24	GATD3 (ENSMICG00000001007) #25	ICOSLG (ENSMICG00000001250) #26	DNMT3L (ENSMICG00000048144) #27	AIRE (ENSMICG00000034908) #28	ENSMICG00000046893	PFKL (ENSMICG00000035233) #29	CFAP410 (ENSMICG00000026921) #30	TRPM2 (ENSMICG00000012499) #31	TSPEAR (ENSMICG00000009957) #33	BACE2 (ENSMICG00000027643)	FAM3B (ENSMICG00000012335)	MX2 (ENSMICG00000012345)	MX1 (ENSMICG00000017322)
Bushbaby	MODERN SPECIES	243	SLC37A1 (ENSOGAG00000015740)	PDE9A (ENSOGAG00000015745) #7	WDR4 (ENSOGAG00000003658) #8	ENSOGAG00000003661 #9	PKNOX1 (ENSOGAG00000003664) #10	CBS (ENSOGAG00000016500) #12	ENSOGAG00000032959	ENSOGAG00000016504 #13	CRYAA (ENSOGAG00000016506) #14	SIK1 (ENSOGAG00000000860) #15	HSF2BP (ENSOGAG00000009866) #16	RRP1B (ENSOGAG00000009872) #18	PDXK (ENSOGAG00000006093) #19	CSTB (ENSOGAG00000006101) #20	RRP1 (ENSOGAG00000006105) #21	AGPAT3 (ENSOGAG00000003775) #22	TRAPPC10 (ENSOGAG00000012463) #23	PWP2 (ENSOGAG00000012473) #24	GATD3 (ENSOGAG00000012480) #25	ICOSLG (ENSOGAG00000015366) #26	DNMT3L (ENSOGAG00000015368) #27	AIRE (ENSOGAG00000010769) #28	PFKL (ENSOGAG00000027753) #29	CFAP410 (ENSOGAG00000003170) #30	TRPM2 (ENSOGAG00000014398) #31	LRRC3 (ENSOGAG00000013776) #32	TSPEAR (ENSOGAG00000003682) #33	ENSOGAG00000034456	ENSOGAG00000033488	ENSOGAG00000012063	SUMO3 (ENSOGAG00000004715)
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258	ENSGT00940000155183 #35
Glires	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000163258	ENSGT00940000163441.f.a.a.a #37	ENSGT00940000158579	ENSGT00940000163845
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183 #35	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183 #35	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.lb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j.o	ENSGT00390000004977	ENSGT01090000259987.a.a.a
Alpin marmot	MODERN SPECIES	4	SLC37A1 (ENSMMMG00000010809)	PDE9A (ENSMMMG00000010894) #7	WDR4 (ENSMMMG00000011036) #8	ENSMMMG00000011055 #9	PKNOX1 (ENSMMMG00000011067) #10	CBS (ENSMMMG00000011087) #12	U2AF1 (ENSMMMG00000011117) #13	CRYAA (ENSMMMG00000011152) #14	SIK1 (ENSMMMG00000011169) #15	HSF2BP (ENSMMMG00000011193) #16	RRP1B (ENSMMMG00000011209) #18	PDXK (ENSMMMG00000011250) #19	ENSMMMG00000011256 #20	RRP1 (ENSMMMG00000011263) #21	ENSMMMG00000011344	AGPAT3 (ENSMMMG00000011363) #22	TRAPPC10 (ENSMMMG00000011441) #23	PWP2 (ENSMMMG00000011468) #24	GATD3 (ENSMMMG00000012356) #25	ICOSLG (ENSMMMG00000012361) #26	ENSMMMG00000012363 #27	AIRE (ENSMMMG00000012367) #28	ENSMMMG00000012488 #29	CFAP410 (ENSMMMG00000012554) #30	TRPM2 (ENSMMMG00000012573) #31	LRRC3 (ENSMMMG00000012614) #32	TSPEAR (ENSMMMG00000012623) #33	ENSMMMG00000012640	ENSMMMG00000012650 #37	ENSMMMG00000012657	UBE2G2 (ENSMMMG00000012664)
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826.lb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a.db #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32
Arctic ground squirrel	MODERN SPECIES	443	RSPH1 (ENSUPAG00010003495)	SLC37A1 (ENSUPAG00010003472)	PDE9A (ENSUPAG00010003388) #7	WDR4 (ENSUPAG00010003363) #8	ENSUPAG00010003358 #9	PKNOX1 (ENSUPAG00010003344) #10	CBS (ENSUPAG00010003327) #12	U2AF1 (ENSUPAG00010003308) #13	CRYAA (ENSUPAG00010003295) #14	SIK1 (ENSUPAG00010003268) #15	HSF2BP (ENSUPAG00010003260) #16	RRP1B (ENSUPAG00010003249) #18	PDXK (ENSUPAG00010003236) #19	ENSUPAG00010003225 #20	RRP1 (ENSUPAG00010003195) #21	AGPAT3 (ENSUPAG00010003091) #22	TRAPPC10 (ENSUPAG00010003060) #23	PWP2 (ENSUPAG00010003026) #24	GATD3 (ENSUPAG00010003022) #25	ICOSLG (ENSUPAG00010003013) #26	DNMT3L (ENSUPAG00010003002) #27	AIRE (ENSUPAG00010002765) #28	PFKL (ENSUPAG00010002724) #29	CFAP410 (ENSUPAG00010002705) #30	TRPM2 (ENSUPAG00010002652) #31	LRRC3 (ENSUPAG00010002648) #32
Squirrel	MODERN SPECIES	100	RSPH1 (ENSSTOG00000002331)	SLC37A1 (ENSSTOG00000025445)	PDE9A (ENSSTOG00000001452) #7	WDR4 (ENSSTOG00000000442) #8	NDUFV3 (ENSSTOG00000000445) #9	PKNOX1 (ENSSTOG00000000447) #10	CBS (ENSSTOG00000024905) #12	U2AF1 (ENSSTOG00000012766) #13	CRYAA (ENSSTOG00000019571) #14	SIK1 (ENSSTOG00000003810) #15	HSF2BP (ENSSTOG00000011783) #16	RRP1B (ENSSTOG00000011790) #18	PDXK (ENSSTOG00000007194) #19	CSTB (ENSSTOG00000025748) #20	RRP1 (ENSSTOG00000011116) #21	AGPAT3 (ENSSTOG00000010466) #22	TRAPPC10 (ENSSTOG00000029008) #23	PWP2 (ENSSTOG00000014194) #24	ENSSTOG00000029443 #25	ICOSLG (ENSSTOG00000026567) #26	DNMT3L (ENSSTOG00000028895) #27	AIRE (ENSSTOG00000023870) #28	PFKL (ENSSTOG00000026523) #29	CFAP410 (ENSSTOG00000008553) #30	TRPM2 (ENSSTOG00000024472) #31	LRRC3 (ENSSTOG00000023533) #32
Eurasian red squirrel	MODERN SPECIES	1	PDE9A (ENSSVLG00005011481) #7	ENSSVLG00005011248	WDR4 (ENSSVLG00005025158) #8	ENSSVLG00005025141 #9	PKNOX1 (ENSSVLG00005025120) #10	CBS (ENSSVLG00005025055) #12	U2AF1 (ENSSVLG00005024981) #13	CRYAA (ENSSVLG00005024913) #14	ENSSVLG00005024890 #15	ENSSVLG00005024861	HSF2BP (ENSSVLG00005024842) #16	ENSSVLG00005024819 #18	PDXK (ENSSVLG00005024785) #19	CSTB (ENSSVLG00005024758) #20	RRP1 (ENSSVLG00005024724) #21	AGPAT3 (ENSSVLG00005024678) #22	TRAPPC10 (ENSSVLG00005024638) #23	PWP2 (ENSSVLG00005024557) #24	GATD3 (ENSSVLG00005024474) #25	ICOSLG (ENSSVLG00005024369) #26	ENSSVLG00005024326 #27	AIRE (ENSSVLG00005023997) #28	PFKL (ENSSVLG00005023925) #29	CFAP410 (ENSSVLG00005023882) #30	TRPM2 (ENSSVLG00005023598) #31	LRRC3 (ENSSVLG00005023556) #32	ENSSVLG00005023369	ENSSVLG00005023080	ENSSVLG00005022707	ENSSVLG00005022624	TSPEAR (ENSSVLG00005022529) #33
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00940000162185	ENSGT00950000183022.b	ENSGT00940000158212.B	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000004977	ENSGT00950000182895.a.b.j	ENSGT00940000158193	ENSGT00940000155183 #35	ENSGT00510000047718 #33	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.n.b
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00940000162185	ENSGT00950000183022.b	ENSGT00940000158212.B	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000004977	ENSGT00950000182895.a.b.j	ENSGT00940000158193	ENSGT00940000155183 #35	ENSGT00510000047718 #33	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.n.b
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00940000162185	ENSGT00950000183022.b	ENSGT00940000158212.B	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709	ENSGT01090000259987.a.a.a	ENSGT00390000004977	ENSGT00950000182895.a.a.a.b.f	ENSGT00940000158193	ENSGT00940000155183 #35	ENSGT00510000047718 #33	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00530000064267	ENSGT00940000154678.a.a	ENSGT00940000159548	ENSGT00950000183004.a.b.a.b	ENSGT00940000155686.n.b
Long-tailed chinchilla	MODERN SPECIES	114	SLX9 (ENSCLAG00000015540)	ITGB2 (ENSCLAG00000011530)	PTTG1IP (ENSCLAG00000008686)	ENSCLAG00000006914	UBE2G2 (ENSCLAG00000006675)	ENSCLAG00000006283	ENSCLAG00000005933	ENSCLAG00000005246	ENSCLAG00000004501 #35	ENSCLAG00000007645	ENSCLAG00000005431 #35	TSPEAR (ENSCLAG00000006788) #33	PDXK (ENSCLAG00000004982) #19	CSTB (ENSCLAG00000009970) #20	RRP1 (ENSCLAG00000011639) #21	AGPAT3 (ENSCLAG00000005641) #22	TRAPPC10 (ENSCLAG00000004935) #23	PWP2 (ENSCLAG00000009503) #24	GATD3 (ENSCLAG00000006863) #25	ICOSLG (ENSCLAG00000004572) #26	DNMT3L (ENSCLAG00000008128) #27	AIRE (ENSCLAG00000004699) #28	PFKL (ENSCLAG00000006907) #29	CFAP410 (ENSCLAG00000005977) #30	TRPM2 (ENSCLAG00000007001) #31	LRRC3 (ENSCLAG00000006488) #32	TMPRSS2 (ENSCLAG00000006480)	FAM3B (ENSCLAG00000005832)	ENSCLAG00000006920	BACE2 (ENSCLAG00000006208)	DSCAM (ENSCLAG00000016317)
Degu	MODERN SPECIES	86	COL6A2 (ENSODEG00000013531)	ENSODEG00000020105	ENSODEG00000013981	PCBP3 (ENSODEG00000012873)	ENSODEG00000013398	ENSODEG00000020203	POFUT2 (ENSODEG00000013451)	ADARB1 (ENSODEG00000014508)	ITGB2 (ENSODEG00000013569)	PTTG1IP (ENSODEG00000013537)	ENSODEG00000013838	ENSODEG00000014012	ENSODEG00000013439 #35	TSPEAR (ENSODEG00000013818) #33	PDXK (ENSODEG00000013386) #19	AGPAT3 (ENSODEG00000012787) #22	ENSODEG00000013648 #23	PWP2 (ENSODEG00000013073) #24	ENSODEG00000013954 #25	PFKL (ENSODEG00000014418) #29	CFAP410 (ENSODEG00000012840) #30	TRPM2 (ENSODEG00000013043) #31	LRRC3 (ENSODEG00000020091) #32	DSCAM (ENSODEG00000012858)	BACE2 (ENSODEG00000013570)	ENSODEG00000014232	ENSODEG00000013917	TMPRSS2 (ENSODEG00000013358)	RIPK4 (ENSODEG00000013779)	PRDM15 (ENSODEG00000013112)	C2CD2 (ENSODEG00000014616)
Guinea pig	MODERN SPECIES	90	ADARB1 (ENSCPOG00000022969)	SLX9 (ENSCPOG00000036519)	ITGB2 (ENSCPOG00000025922)	PTTG1IP (ENSCPOG00000023250)	SUMO3 (ENSCPOG00000025203)	UBE2G2 (ENSCPOG00000035970)	ENSCPOG00000037876 #35	ENSCPOG00000032969 #35	ENSCPOG00000038786 #35	ENSCPOG00000034347 #35	TSPEAR (ENSCPOG00000004362) #33	ENSCPOG00000036402 #35	PDXK (ENSCPOG00000039719) #19	CSTB (ENSCPOG00000031855) #20	RRP1 (ENSCPOG00000038986) #21	AGPAT3 (ENSCPOG00000032718) #22	TRAPPC10 (ENSCPOG00000011117) #23	PWP2 (ENSCPOG00000023616) #24	GATD3 (ENSCPOG00000011419) #25	DNMT3L (ENSCPOG00000004070) #27	AIRE (ENSCPOG00000019868) #28	PFKL (ENSCPOG00000019438) #29	CFAP410 (ENSCPOG00000009611) #30	TRPM2 (ENSCPOG00000023512) #31	LRRC3 (ENSCPOG00000030436) #32	PCP4 (ENSCPOG00000039173)	DSCAM (ENSCPOG00000005367)	BACE2 (ENSCPOG00000007403)	ENSCPOG00000025373	ENSCPOG00000013108	ENSCPOG00000021489
Naked mole-rat female	MODERN SPECIES	11	SLX9 (ENSHGLG00000045493)	ITGB2 (ENSHGLG00000013472)	ENSHGLG00000049629	PTTG1IP (ENSHGLG00000033185)	ENSHGLG00000037860	ENSHGLG00000009258	ENSHGLG00000014199 #33	ENSHGLG00000005505 #35	ENSHGLG00000043957	ENSHGLG00000038544 #35	ENSHGLG00000007283	ENSHGLG00000015985	ENSHGLG00000046004 #19	CSTB (ENSHGLG00000047009) #20	RRP1 (ENSHGLG00000050109) #21	AGPAT3 (ENSHGLG00000048529) #22	TRAPPC10 (ENSHGLG00000013176) #23	PWP2 (ENSHGLG00000017401) #24	ENSHGLG00000018104 #25	ENSHGLG00000013877 #26	ENSHGLG00000009448 #27	AIRE (ENSHGLG00000016716) #28	PFKL (ENSHGLG00000017234) #29	ENSHGLG00000016027 #30	TRPM2 (ENSHGLG00000018785) #31	ENSHGLG00000042683 #32	PCP4 (ENSHGLG00000043480)	ENSHGLG00000005193	ENSHGLG00000008616	ENSHGLG00000006993	ENSHGLG00000041834
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183 #35	ENSGT00940000161526.b	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183 #35	ENSGT00940000161526.b	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Muroidea	ANCESTRAL SPECIES	11	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989 #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183 #35	ENSGT00940000161526.b	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989.t #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183.e #35	ENSGT00940000161526.b	ENSGT00940000155183.f #35	ENSGT00940000158193
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989.t #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183.e #35	ENSGT00940000161526.b	ENSGT00940000155183.f #35	ENSGT00940000158193
Mus	ANCESTRAL SPECIES	15	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000161526.b.r.b.b	ENSGT00940000155183.e.c #35	ENSGT00940000155183.f.a #35	ENSGT00940000155183.e.d.a #35	ENSGT00510000047718 #33
Mus_A	ANCESTRAL SPECIES	11	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000155183.e.c.b.a #35	ENSGT00940000155183.e.c.b.b.a #35	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j
Mus_B	ANCESTRAL SPECIES	10	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a.c
Mouse	MODERN SPECIES	1	Or7a42 (ENSMUSG00000094080)	Or7a38 (ENSMUSG00000094673)	Or7a39 (ENSMUSG00000062873)	Or7c70 (ENSMUSG00000051190)	Slc1a6 (ENSMUSG00000005357)	Ccdc105 (ENSMUSG00000078442)	Casp14 (ENSMUSG00000005355)	Or1i2 (ENSMUSG00000071185)	Syde1 (ENSMUSG00000032714)	Ilvbl (ENSMUSG00000032763)	Or10b1 (ENSMUSG00000107822)	Pdxk (ENSMUSG00000032788) #19	Cstb (ENSMUSG00000005054) #20	Rrp1 (ENSMUSG00000061032) #21	Gm56820 (ENSMUSG00000118646)	Agpat3 (ENSMUSG00000001211) #22	Trappc10 (ENSMUSG00000000374) #23	Pwp2 (ENSMUSG00000032834) #24	Gatd3a (ENSMUSG00000053329) #25	Icosl (ENSMUSG00000000732) #26	Dnmt3l (ENSMUSG00000000730) #27	Aire (ENSMUSG00000000731) #28	Pfkl (ENSMUSG00000020277) #29	Cfap410 (ENSMUSG00000020284) #30	Trpm2 (ENSMUSG00000009292) #31	Lrrc3 (ENSMUSG00000051652) #32	Gm3285 (ENSMUSG00000111915) #35	Gm10318 (ENSMUSG00000071195) #35	Gm36176 (ENSMUSG00000112653) #35	Krtap10-10 (ENSMUSG00000112223) #35	Krtap10-4 (ENSMUSG00000069582) #35
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000155183.e.c.b.a #35	ENSGT00510000047718 #33	ENSGT00940000155183.e.d.a.b #35	ENSGT00940000155183.f.a #35	ENSGT00940000155183.e.c.b.b.b #35
Steppe mouse	MODERN SPECIES	3068	Or7a36 (ENSMSIG00000000611)	Or7a37 (ENSMSIG00000000592)	ENSMSIG00000000580	Or7c70 (ENSMSIG00000000575)	Slc1a6 (ENSMSIG00000000543)	Ccdc105 (ENSMSIG00000000509)	Casp14 (ENSMSIG00000000458)	ENSMSIG00000000436	Or1i2 (ENSMSIG00000000403)	Syde1 (ENSMSIG00000000382)	Ilvbl (ENSMSIG00000000223)	Or10b1 (ENSMSIG00000000154)	Pdxk (ENSMSIG00000000114) #19	Cstb (ENSMSIG00000026515) #20	Rrp1 (ENSMSIG00000026489) #21	Agpat3 (ENSMSIG00000026402) #22	Trappc10 (ENSMSIG00000026358) #23	Pwp2 (ENSMSIG00000026339) #24	Gatd3a (ENSMSIG00000026316) #25	Icosl (ENSMSIG00000026290) #26	Dnmt3l (ENSMSIG00000026239) #27	Aire (ENSMSIG00000025315) #28	Pfkl (ENSMSIG00000025294) #29	ENSMSIG00000025258	Trpm2 (ENSMSIG00000025139) #31	ENSMSIG00000025134 #32	Tspear (ENSMSIG00000025116) #33	ENSMSIG00000025108 #35	Gm19668 (ENSMSIG00000025103) #35	Gm9639 (ENSMSIG00000025102) #35
spretus	MODERN SPECIES	1	Or7a37 (MGP_SPRETEiJ_G0016335)	Or7a39 (MGP_SPRETEiJ_G0016334)	MGP_SPRETEiJ_G0016332	MGP_SPRETEiJ_G0016333	Or7c70 (MGP_SPRETEiJ_G0016331)	Slc1a6 (MGP_SPRETEiJ_G0016330)	Ccdc105 (MGP_SPRETEiJ_G0016329)	Casp14 (MGP_SPRETEiJ_G0016328)	Or1i2 (MGP_SPRETEiJ_G0016327)	Syde1 (MGP_SPRETEiJ_G0016326)	Ilvbl (MGP_SPRETEiJ_G0016325)	MGP_SPRETEiJ_G0016324	Pdxk (MGP_SPRETEiJ_G0016323) #19	Cstb (MGP_SPRETEiJ_G0016322) #20	Rrp1 (MGP_SPRETEiJ_G0016321) #21	Agpat3 (MGP_SPRETEiJ_G0016320) #22	Trappc10 (MGP_SPRETEiJ_G0016319) #23	Pwp2 (MGP_SPRETEiJ_G0016318) #24	Gatd3a (MGP_SPRETEiJ_G0016317) #25	Icosl (MGP_SPRETEiJ_G0016316) #26	Dnmt3l (MGP_SPRETEiJ_G0016315) #27	Aire (MGP_SPRETEiJ_G0016314) #28	Pfkl (MGP_SPRETEiJ_G0016313) #29	Cfap410 (MGP_SPRETEiJ_G0016312) #30	Trpm2 (MGP_SPRETEiJ_G0016311) #31	Lrrc3 (MGP_SPRETEiJ_G0016310) #32	MGP_SPRETEiJ_G0016309 #35	Tspear (MGP_SPRETEiJ_G0016308) #33	MGP_SPRETEiJ_G0016307 #35	Gm19668 (MGP_SPRETEiJ_G0016306) #35	Gm10100 (MGP_SPRETEiJ_G0016305)
Ryukyu mouse	MODERN SPECIES	1	Or7a36 (MGP_CAROLIEiJ_G0015522)	Or7a37 (MGP_CAROLIEiJ_G0015521)	MGP_CAROLIEiJ_G0015519	Or7a39 (MGP_CAROLIEiJ_G0015520)	Or7c70 (MGP_CAROLIEiJ_G0015518)	Slc1a6 (MGP_CAROLIEiJ_G0015517)	Ccdc105 (MGP_CAROLIEiJ_G0015516)	Casp14 (MGP_CAROLIEiJ_G0015515)	Or1i2 (MGP_CAROLIEiJ_G0015514)	Syde1 (MGP_CAROLIEiJ_G0015513)	Ilvbl (MGP_CAROLIEiJ_G0015512)	MGP_CAROLIEiJ_G0015511	Pdxk (MGP_CAROLIEiJ_G0015510) #19	Cstb (MGP_CAROLIEiJ_G0015509) #20	Rrp1 (MGP_CAROLIEiJ_G0015508) #21	Agpat3 (MGP_CAROLIEiJ_G0015507) #22	Trappc10 (MGP_CAROLIEiJ_G0015506) #23	Pwp2 (MGP_CAROLIEiJ_G0015505) #24	Gatd3a (MGP_CAROLIEiJ_G0015504) #25	Icosl (MGP_CAROLIEiJ_G0015503) #26	Dnmt3l (MGP_CAROLIEiJ_G0015502) #27	Aire (MGP_CAROLIEiJ_G0015501) #28	Pfkl (MGP_CAROLIEiJ_G0015500) #29	Cfap410 (MGP_CAROLIEiJ_G0015499) #30	MGP_CAROLIEiJ_G0015498 #31	Lrrc3 (MGP_CAROLIEiJ_G0015497) #32	Tspear (MGP_CAROLIEiJ_G0015496) #33	Krtap10-10 (MGP_CAROLIEiJ_G0015495) #35	MGP_CAROLIEiJ_G0015494 #35	Gm19668 (MGP_CAROLIEiJ_G0015493) #35	MGP_CAROLIEiJ_G0015492 #35
Shrew mouse	MODERN SPECIES	22	Or7a36 (MGP_PahariEiJ_G0030935)	Or7a37 (MGP_PahariEiJ_G0030934)	MGP_PahariEiJ_G0030932	Or7a39 (MGP_PahariEiJ_G0030933)	Or7c70 (MGP_PahariEiJ_G0030931)	MGP_PahariEiJ_G0030930	Slc1a6 (MGP_PahariEiJ_G0030929)	Ccdc105 (MGP_PahariEiJ_G0030928)	Casp14 (MGP_PahariEiJ_G0030927)	Or1i2 (MGP_PahariEiJ_G0030926)	Syde1 (MGP_PahariEiJ_G0030925)	Ilvbl (MGP_PahariEiJ_G0030924)	Pdxk (MGP_PahariEiJ_G0030923) #19	Cstb (MGP_PahariEiJ_G0030922) #20	Rrp1 (MGP_PahariEiJ_G0030921) #21	Agpat3 (MGP_PahariEiJ_G0030920) #22	Trappc10 (MGP_PahariEiJ_G0030919) #23	Pwp2 (MGP_PahariEiJ_G0030918) #24	Gatd3a (MGP_PahariEiJ_G0030917) #25	MGP_PahariEiJ_G0030916 #26	Dnmt3l (MGP_PahariEiJ_G0030915) #27	Aire (MGP_PahariEiJ_G0030914) #28	Pfkl (MGP_PahariEiJ_G0030913) #29	Cfap410 (MGP_PahariEiJ_G0030912) #30	MGP_PahariEiJ_G0030911 #31	Lrrc3 (MGP_PahariEiJ_G0030910) #32	Tspear (MGP_PahariEiJ_G0030909) #33	MGP_PahariEiJ_G0030908 #35	MGP_PahariEiJ_G0030907 #35	MGP_PahariEiJ_G0030906 #35	MGP_PahariEiJ_G0030905
Rat	MODERN SPECIES	12	Slc37a1 (ENSRNOG00000001169)	Pde9a (ENSRNOG00000001174) #7	Wdr4 (ENSRNOG00000001181) #8	Ndufv3 (ENSRNOG00000001182) #9	Pknox1 (ENSRNOG00000001184) #10	Cbs (ENSRNOG00000029528) #12	U2af1 (ENSRNOG00000045860) #13	Sik1 (ENSRNOG00000001189) #15	Hsf2bp (ENSRNOG00000001193) #16	Rrp1b (ENSRNOG00000001194) #18	RGD1566085 (ENSRNOG00000068407) #19	Pdxk (ENSRNOG00000049937) #19	Cstb (ENSRNOG00000001201) #20	Rrp1 (ENSRNOG00000001203) #21	Gm56820 (ENSRNOG00000062695)	Agpat3 (ENSRNOG00000001205) #22	Trappc10 (ENSRNOG00000023210) #23	Pwp2 (ENSRNOG00000001210) #24	Gatd3a (ENSRNOG00000001211) #25	Icoslg (ENSRNOG00000023109) #26	Dnmt3l (ENSRNOG00000001212) #27	Aire (ENSRNOG00000001213) #28	Pfkl (ENSRNOG00000001214) #29	Cfap410 (ENSRNOG00000001215) #30	Trpm2 (ENSRNOG00000001216) #31	Lrrc3 (ENSRNOG00000001217) #32	Tspear (ENSRNOG00000001219) #33	LOC100365646 (ENSRNOG00000001218) #35	LOC120098854 (ENSRNOG00000067436) #35	LOC120098855 (ENSRNOG00000042329) #35	LOC690415 (ENSRNOG00000069553) #35
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989.t #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183.e.a.b #35	ENSGT00940000161526.b	ENSGT00940000155183.f #35	ENSGT00940000158193
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989.t #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000158193	ENSGT00950000182895.a.b.j	ENSGT00390000004977	ENSGT01090000259987.a.a.a.c
Prairie vole	MODERN SPECIES	352	Rsph1 (ENSMOCG00000003255)	Slc37a1 (ENSMOCG00000013618)	Pde9a (ENSMOCG00000012568) #7	Wdr4 (ENSMOCG00000022127) #8	ENSMOCG00000021683 #9	Pknox1 (ENSMOCG00000000944) #10	Cbs (ENSMOCG00000010781) #12	U2af1 (ENSMOCG00000003736) #13	Cryaa (ENSMOCG00000001790) #14	Sik1 (ENSMOCG00000000510) #15	Hsf2bp (ENSMOCG00000006152) #16	Rrp1b (ENSMOCG00000001117) #18	Pdxk (ENSMOCG00000006016) #19	Cstb (ENSMOCG00000022035) #20	Rrp1 (ENSMOCG00000015687) #21	ENSMOCG00000010991 #22	Trappc10 (ENSMOCG00000006082) #23	Pwp2 (ENSMOCG00000003844) #24	Gatd3a (ENSMOCG00000019921) #25	Icosl (ENSMOCG00000018242) #26	Dnmt3l (ENSMOCG00000022517) #27	Aire (ENSMOCG00000008071) #28	ENSMOCG00000013045 #29	Cfap410 (ENSMOCG00000020426) #30	Trpm2 (ENSMOCG00000019856) #31	Lrrc3 (ENSMOCG00000017485) #32	ENSMOCG00000016139 #35	ENSMOCG00000015079 #35	ENSMOCG00000014262 #35	ENSMOCG00000013216 #35	ENSMOCG00000004341
Northern American deer mouse	MODERN SPECIES	13	Pde9a (ENSPEMG00000023664) #7	Wdr4 (ENSPEMG00000022550) #8	Ndufv3 (ENSPEMG00000022595) #9	Pknox1 (ENSPEMG00000021492) #10	Cbs (ENSPEMG00000021739) #12	U2af1 (ENSPEMG00000021041) #13	ENSPEMG00000027416	Cryaa (ENSPEMG00000021591) #14	Sik1 (ENSPEMG00000024129) #15	Hsf2bp (ENSPEMG00000021638) #16	Rrp1b (ENSPEMG00000022490) #18	ENSPEMG00000023225 #19	ENSPEMG00000030967 #19	Cstb (ENSPEMG00000025261) #20	Rrp1 (ENSPEMG00000018421) #21	Agpat3 (ENSPEMG00000016159) #22	Trappc10 (ENSPEMG00000023811) #23	Pwp2 (ENSPEMG00000009968) #24	Gatd3a (ENSPEMG00000023416) #25	ENSPEMG00000007525 #26	Dnmt3l (ENSPEMG00000009203) #27	Aire (ENSPEMG00000022217) #28	Pfkl (ENSPEMG00000022772) #29	Cfap410 (ENSPEMG00000022711) #30	Trpm2 (ENSPEMG00000012456) #31	Lrrc3 (ENSPEMG00000030505) #32	Tspear (ENSPEMG00000016261) #33	ENSPEMG00000023368 #35	ENSPEMG00000021662 #35	ENSPEMG00000029694 #35	ENSPEMG00000026871 #35
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b #7	ENSGT00390000012174 #8	ENSGT00390000012196 #9	ENSGT00940000159505.x #10	ENSGT00510000047027 #12	ENSGT00950000183152.B.c.a #13	ENSGT00940000160159 #14	ENSGT00940000154989.t #15	ENSGT00390000008490 #16	ENSGT00390000011821.a #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #33	ENSGT00940000155183.e.a.b.a.b #35	ENSGT00940000161526.b	ENSGT00940000155183.f #35	ENSGT00940000155183.e.a.b.a.a #35
Golden Hamster	MODERN SPECIES	641	Tmprss3 (ENSMAUG00000020969)	Ubash3a (ENSMAUG00000019578)	Rsph1 (ENSMAUG00000014285)	Slc37a1 (ENSMAUG00000021076)	Pde9a (ENSMAUG00000001943) #7	Wdr4 (ENSMAUG00000020696) #8	Ndufv3 (ENSMAUG00000020188) #9	Pknox1 (ENSMAUG00000015669) #10	Cbs (ENSMAUG00000020960) #12	U2af1 (ENSMAUG00000020528) #13	Cryaa (ENSMAUG00000017095) #14	Sik1 (ENSMAUG00000018473) #15	Hsf2bp (ENSMAUG00000018607) #16	Rrp1b (ENSMAUG00000021508) #18	Rrp1 (ENSMAUG00000017653) #21	Agpat3 (ENSMAUG00000019017) #22	Trappc10 (ENSMAUG00000021971) #23	Pwp2 (ENSMAUG00000020265) #24	Icosl (ENSMAUG00000019140) #26	Dnmt3l (ENSMAUG00000019680) #27	Aire (ENSMAUG00000021943) #28	Pfkl (ENSMAUG00000017741) #29	Cfap410 (ENSMAUG00000018378) #30	Trpm2 (ENSMAUG00000005011) #31	Lrrc3 (ENSMAUG00000021907) #32	Tspear (ENSMAUG00000011883) #33	ENSMAUG00000012939 #35	ENSMAUG00000007884	ENSMAUG00000021981	ENSMAUG00000002462	ENSMAUG00000021040 #35
Chinese hamster chok1gshd	MODERN SPECIES	204							ENSCGRG00001003985 #16	ENSCGRG00001010889 #18	ENSCGRG00001019133 #19	ENSCGRG00001016759 #19	ENSCGRG00001005047 #19	ENSCGRG00001023882 #18	ENSCGRG00001021534 #16	Cstb (ENSCGRG00001023703) #20	Rrp1 (ENSCGRG00001011920) #21	Agpat3 (ENSCGRG00001023999) #22	Trappc10 (ENSCGRG00001019791) #23	Pwp2 (ENSCGRG00001020074) #24	Gatd3a (ENSCGRG00001019921) #25	Icosl (ENSCGRG00001009599) #26	Dnmt3l (ENSCGRG00001016841) #27	Aire (ENSCGRG00001021441) #28	Pfkl (ENSCGRG00001015753) #29	Cfap410 (ENSCGRG00001007084) #30	Trpm2 (ENSCGRG00001014379) #31	Lrrc3 (ENSCGRG00001011603) #32	Tspear (ENSCGRG00001017931) #33	ENSCGRG00001013139 #35	ENSCGRG00001017382 #35	Gm36176 (ENSCGRG00001022992) #35	ENSCGRG00001000038 #35
Upper Galilee mountains blind mole rat	MODERN SPECIES	557	Rsph1 (ENSNGAG00000005022)	Slc37a1 (ENSNGAG00000022440)	Pde9a (ENSNGAG00000014370) #7	Wdr4 (ENSNGAG00000017117) #8	Ndufv3 (ENSNGAG00000011220) #9	Pknox1 (ENSNGAG00000015912) #10	Cbs (ENSNGAG00000011354) #12	U2af1 (ENSNGAG00000021641) #13	Cryaa (ENSNGAG00000024156) #14	Sik1 (ENSNGAG00000015397) #15	Hsf2bp (ENSNGAG00000002647) #16	Rrp1b (ENSNGAG00000021073) #18	Pdxk (ENSNGAG00000011007) #19	Cstb (ENSNGAG00000001985) #20	ENSNGAG00000022344 #21	Agpat3 (ENSNGAG00000023781) #22	ENSNGAG00000020131 #23	Pwp2 (ENSNGAG00000021106) #24	Gatd3a (ENSNGAG00000023649) #25	ENSNGAG00000007536 #26	Dnmt3l (ENSNGAG00000004497) #27	Aire (ENSNGAG00000006411) #28	Pfkl (ENSNGAG00000023632) #29	Cfap410 (ENSNGAG00000008743) #30	Trpm2 (ENSNGAG00000015763) #31	Lrrc3 (ENSNGAG00000024059) #32	Tspear (ENSNGAG00000022570) #33	ENSNGAG00000012871 #35	ENSNGAG00000023342 #35	ENSNGAG00000000805 #35
Lesser Egyptian jerboa	MODERN SPECIES	54	Slc37a1 (ENSJJAG00000009176)	Pde9a (ENSJJAG00000022814) #7	Wdr4 (ENSJJAG00000016232) #8	ENSJJAG00000012928 #9	ENSJJAG00000022210	Pknox1 (ENSJJAG00000003326) #10	Cbs (ENSJJAG00000019675) #12	U2af1 (ENSJJAG00000000485) #13	Cryaa (ENSJJAG00000008890) #14	Sik1 (ENSJJAG00000021978) #15	Hsf2bp (ENSJJAG00000011558) #16	Rrp1b (ENSJJAG00000021279) #18	Pdxk (ENSJJAG00000016609) #19	ENSJJAG00000019836 #20	Rrp1 (ENSJJAG00000018886) #21	Agpat3 (ENSJJAG00000019770) #22	Lbh (ENSJJAG00000023694)	Lclat1 (ENSJJAG00000015441) ##22	Capn13 (ENSJJAG00000015680)	Galnt14 (ENSJJAG00000020390)	Ehd3 (ENSJJAG00000013415)	Xdh (ENSJJAG00000017980)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000182836.b.b.b.a #22
Pika	MODERN SPECIES	2592																AGPAT3 (ENSOPRG00000013786) #22
Tree shrew	MODERN SPECIES	8189																AGPAT3 (ENSTBEG00000011207) #22