Euarchontoglires_A ANCESTRAL SPECIES 2 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000158579 ENSGT00940000163845 ENSGT00940000163258 ENSGT00940000155183 Tree shrew MODERN SPECIES 8189 AGPAT3 (ENSTBEG00000011207) #22 Glires ANCESTRAL SPECIES 2 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000163258 ENSGT00940000163441.f.a.a.a ENSGT00940000158579 ENSGT00940000163845 Rodentia ANCESTRAL SPECIES 2 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183 ENSGT00940000158193 ENSGT00950000182895.a.b.j ENSGT00390000004977 Rodentia_A ANCESTRAL SPECIES 5 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183 ENSGT00940000158193 ENSGT00950000182895.a.b.j ENSGT00390000004977 Sciuridae ANCESTRAL SPECIES 12 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000158193 ENSGT00950000182895.a.b.j ENSGT00390000004977 ENSGT01090000259987.a.a.a Marmotini ANCESTRAL SPECIES 13 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826.lb ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000158193 ENSGT00950000182895.a.b.j.o ENSGT00390000004977 ENSGT01090000259987.a.a.a Alpin marmot MODERN SPECIES 4 SLC37A1 (ENSMMMG00000010809) PDE9A (ENSMMMG00000010894) WDR4 (ENSMMMG00000011036) ENSMMMG00000011055 PKNOX1 (ENSMMMG00000011067) CBS (ENSMMMG00000011087) U2AF1 (ENSMMMG00000011117) CRYAA (ENSMMMG00000011152) SIK1 (ENSMMMG00000011169) HSF2BP (ENSMMMG00000011193) RRP1B (ENSMMMG00000011209) PDXK (ENSMMMG00000011250) ENSMMMG00000011256 RRP1 (ENSMMMG00000011263) ENSMMMG00000011344 AGPAT3 (ENSMMMG00000011363) #22 TRAPPC10 (ENSMMMG00000011441) PWP2 (ENSMMMG00000011468) GATD3 (ENSMMMG00000012356) ICOSLG (ENSMMMG00000012361) ENSMMMG00000012363 AIRE (ENSMMMG00000012367) ENSMMMG00000012488 CFAP410 (ENSMMMG00000012554) TRPM2 (ENSMMMG00000012573) LRRC3 (ENSMMMG00000012614) TSPEAR (ENSMMMG00000012623) ENSMMMG00000012640 ENSMMMG00000012650 ENSMMMG00000012657 UBE2G2 (ENSMMMG00000012664) Marmotini_b ANCESTRAL SPECIES 30 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826.lb ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a.db ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b Arctic ground squirrel MODERN SPECIES 443 RSPH1 (ENSUPAG00010003495) SLC37A1 (ENSUPAG00010003472) PDE9A (ENSUPAG00010003388) WDR4 (ENSUPAG00010003363) ENSUPAG00010003358 PKNOX1 (ENSUPAG00010003344) CBS (ENSUPAG00010003327) U2AF1 (ENSUPAG00010003308) CRYAA (ENSUPAG00010003295) SIK1 (ENSUPAG00010003268) HSF2BP (ENSUPAG00010003260) RRP1B (ENSUPAG00010003249) PDXK (ENSUPAG00010003236) ENSUPAG00010003225 RRP1 (ENSUPAG00010003195) AGPAT3 (ENSUPAG00010003091) #22 TRAPPC10 (ENSUPAG00010003060) PWP2 (ENSUPAG00010003026) GATD3 (ENSUPAG00010003022) ICOSLG (ENSUPAG00010003013) DNMT3L (ENSUPAG00010003002) AIRE (ENSUPAG00010002765) PFKL (ENSUPAG00010002724) CFAP410 (ENSUPAG00010002705) TRPM2 (ENSUPAG00010002652) LRRC3 (ENSUPAG00010002648) Squirrel MODERN SPECIES 100 RSPH1 (ENSSTOG00000002331) SLC37A1 (ENSSTOG00000025445) PDE9A (ENSSTOG00000001452) WDR4 (ENSSTOG00000000442) NDUFV3 (ENSSTOG00000000445) PKNOX1 (ENSSTOG00000000447) CBS (ENSSTOG00000024905) U2AF1 (ENSSTOG00000012766) CRYAA (ENSSTOG00000019571) SIK1 (ENSSTOG00000003810) HSF2BP (ENSSTOG00000011783) RRP1B (ENSSTOG00000011790) PDXK (ENSSTOG00000007194) CSTB (ENSSTOG00000025748) RRP1 (ENSSTOG00000011116) AGPAT3 (ENSSTOG00000010466) #22 TRAPPC10 (ENSSTOG00000029008) PWP2 (ENSSTOG00000014194) ENSSTOG00000029443 ICOSLG (ENSSTOG00000026567) DNMT3L (ENSSTOG00000028895) AIRE (ENSSTOG00000023870) PFKL (ENSSTOG00000026523) CFAP410 (ENSSTOG00000008553) TRPM2 (ENSSTOG00000024472) LRRC3 (ENSSTOG00000023533) Eurasian red squirrel MODERN SPECIES 1 PDE9A (ENSSVLG00005011481) ENSSVLG00005011248 WDR4 (ENSSVLG00005025158) ENSSVLG00005025141 PKNOX1 (ENSSVLG00005025120) CBS (ENSSVLG00005025055) U2AF1 (ENSSVLG00005024981) CRYAA (ENSSVLG00005024913) ENSSVLG00005024890 ENSSVLG00005024861 HSF2BP (ENSSVLG00005024842) ENSSVLG00005024819 PDXK (ENSSVLG00005024785) CSTB (ENSSVLG00005024758) RRP1 (ENSSVLG00005024724) AGPAT3 (ENSSVLG00005024678) #22 TRAPPC10 (ENSSVLG00005024638) PWP2 (ENSSVLG00005024557) GATD3 (ENSSVLG00005024474) ICOSLG (ENSSVLG00005024369) ENSSVLG00005024326 AIRE (ENSSVLG00005023997) PFKL (ENSSVLG00005023925) CFAP410 (ENSSVLG00005023882) TRPM2 (ENSSVLG00005023598) LRRC3 (ENSSVLG00005023556) ENSSVLG00005023369 ENSSVLG00005023080 ENSSVLG00005022707 ENSSVLG00005022624 TSPEAR (ENSSVLG00005022529) Hystricomorpha ANCESTRAL SPECIES 60 ENSGT00940000162185 ENSGT00950000183022.b ENSGT00940000158212.B ENSGT00390000007989 ENSGT00940000155992 ENSGT00390000015709 ENSGT01090000259987.a.a.a ENSGT00390000004977 ENSGT00950000182895.a.b.j ENSGT00940000158193 ENSGT00940000155183 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.n.b Hystricomorpha_a ANCESTRAL SPECIES 37 ENSGT00940000162185 ENSGT00950000183022.b ENSGT00940000158212.B ENSGT00390000007989 ENSGT00940000155992 ENSGT00390000015709 ENSGT01090000259987.a.a.a ENSGT00390000004977 ENSGT00950000182895.a.b.j ENSGT00940000158193 ENSGT00940000155183 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.n.b Hystricomorpha_b ANCESTRAL SPECIES 34 ENSGT00940000162185 ENSGT00950000183022.b ENSGT00940000158212.B ENSGT00390000007989 ENSGT00940000155992 ENSGT00390000015709 ENSGT01090000259987.a.a.a ENSGT00390000004977 ENSGT00950000182895.a.a.a.b.f ENSGT00940000158193 ENSGT00940000155183 ENSGT00510000047718 ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00530000064267 ENSGT00940000154678.a.a ENSGT00940000159548 ENSGT00950000183004.a.b.a.b ENSGT00940000155686.n.b Long-tailed chinchilla MODERN SPECIES 114 SLX9 (ENSCLAG00000015540) ITGB2 (ENSCLAG00000011530) PTTG1IP (ENSCLAG00000008686) ENSCLAG00000006914 UBE2G2 (ENSCLAG00000006675) ENSCLAG00000006283 ENSCLAG00000005933 ENSCLAG00000005246 ENSCLAG00000004501 ENSCLAG00000007645 ENSCLAG00000005431 TSPEAR (ENSCLAG00000006788) PDXK (ENSCLAG00000004982) CSTB (ENSCLAG00000009970) RRP1 (ENSCLAG00000011639) AGPAT3 (ENSCLAG00000005641) #22 TRAPPC10 (ENSCLAG00000004935) PWP2 (ENSCLAG00000009503) GATD3 (ENSCLAG00000006863) ICOSLG (ENSCLAG00000004572) DNMT3L (ENSCLAG00000008128) AIRE (ENSCLAG00000004699) PFKL (ENSCLAG00000006907) CFAP410 (ENSCLAG00000005977) TRPM2 (ENSCLAG00000007001) LRRC3 (ENSCLAG00000006488) TMPRSS2 (ENSCLAG00000006480) FAM3B (ENSCLAG00000005832) ENSCLAG00000006920 BACE2 (ENSCLAG00000006208) DSCAM (ENSCLAG00000016317) Degu MODERN SPECIES 86 COL6A2 (ENSODEG00000013531) ENSODEG00000020105 ENSODEG00000013981 PCBP3 (ENSODEG00000012873) ENSODEG00000013398 ENSODEG00000020203 POFUT2 (ENSODEG00000013451) ADARB1 (ENSODEG00000014508) ITGB2 (ENSODEG00000013569) PTTG1IP (ENSODEG00000013537) ENSODEG00000013838 ENSODEG00000014012 ENSODEG00000013439 TSPEAR (ENSODEG00000013818) PDXK (ENSODEG00000013386) AGPAT3 (ENSODEG00000012787) #22 ENSODEG00000013648 PWP2 (ENSODEG00000013073) ENSODEG00000013954 PFKL (ENSODEG00000014418) CFAP410 (ENSODEG00000012840) TRPM2 (ENSODEG00000013043) LRRC3 (ENSODEG00000020091) DSCAM (ENSODEG00000012858) BACE2 (ENSODEG00000013570) ENSODEG00000014232 ENSODEG00000013917 TMPRSS2 (ENSODEG00000013358) RIPK4 (ENSODEG00000013779) PRDM15 (ENSODEG00000013112) C2CD2 (ENSODEG00000014616) Guinea pig MODERN SPECIES 90 ADARB1 (ENSCPOG00000022969) SLX9 (ENSCPOG00000036519) ITGB2 (ENSCPOG00000025922) PTTG1IP (ENSCPOG00000023250) SUMO3 (ENSCPOG00000025203) UBE2G2 (ENSCPOG00000035970) ENSCPOG00000037876 ENSCPOG00000032969 ENSCPOG00000038786 ENSCPOG00000034347 TSPEAR (ENSCPOG00000004362) ENSCPOG00000036402 PDXK (ENSCPOG00000039719) CSTB (ENSCPOG00000031855) RRP1 (ENSCPOG00000038986) AGPAT3 (ENSCPOG00000032718) #22 TRAPPC10 (ENSCPOG00000011117) PWP2 (ENSCPOG00000023616) GATD3 (ENSCPOG00000011419) DNMT3L (ENSCPOG00000004070) AIRE (ENSCPOG00000019868) PFKL (ENSCPOG00000019438) CFAP410 (ENSCPOG00000009611) TRPM2 (ENSCPOG00000023512) LRRC3 (ENSCPOG00000030436) PCP4 (ENSCPOG00000039173) DSCAM (ENSCPOG00000005367) BACE2 (ENSCPOG00000007403) ENSCPOG00000025373 ENSCPOG00000013108 ENSCPOG00000021489 Naked mole-rat female MODERN SPECIES 11 SLX9 (ENSHGLG00000045493) ITGB2 (ENSHGLG00000013472) ENSHGLG00000049629 PTTG1IP (ENSHGLG00000033185) ENSHGLG00000037860 ENSHGLG00000009258 ENSHGLG00000014199 ENSHGLG00000005505 ENSHGLG00000043957 ENSHGLG00000038544 ENSHGLG00000007283 ENSHGLG00000015985 ENSHGLG00000046004 CSTB (ENSHGLG00000047009) RRP1 (ENSHGLG00000050109) AGPAT3 (ENSHGLG00000048529) #22 TRAPPC10 (ENSHGLG00000013176) PWP2 (ENSHGLG00000017401) ENSHGLG00000018104 ENSHGLG00000013877 ENSHGLG00000009448 AIRE (ENSHGLG00000016716) PFKL (ENSHGLG00000017234) ENSHGLG00000016027 TRPM2 (ENSHGLG00000018785) ENSHGLG00000042683 PCP4 (ENSHGLG00000043480) ENSHGLG00000005193 ENSHGLG00000008616 ENSHGLG00000006993 ENSHGLG00000041834 Rodentia_B ANCESTRAL SPECIES 2 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183 ENSGT00940000161526.b ENSGT00940000158193 ENSGT00950000182895.a.b.j Myomorpha ANCESTRAL SPECIES 14 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183 ENSGT00940000161526.b ENSGT00940000158193 ENSGT00950000182895.a.b.j Muroidea ANCESTRAL SPECIES 11 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989 ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183 ENSGT00940000161526.b ENSGT00940000158193 ENSGT00950000182895.a.b.j Muroidea_A ANCESTRAL SPECIES 8 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989.t ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183.e ENSGT00940000161526.b ENSGT00940000155183.f ENSGT00940000158193 Murinae ANCESTRAL SPECIES 18 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989.t ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT01050000248522 ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183.e ENSGT00940000161526.b ENSGT00940000155183.f ENSGT00940000158193 Mus ANCESTRAL SPECIES 15 ENSGT00950000183216.d.j.b.a ENSGT00940000153523.b.b ENSGT00950000183216.d.j.b.b ENSGT00940000162084 ENSGT00940000159972 ENSGT00390000003207 ENSGT00940000162117 ENSGT00940000162852.a ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT01050000248522 ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00940000161526.b.r.b.b ENSGT00940000155183.e.c ENSGT00940000155183.f.a ENSGT00940000155183.e.d.a ENSGT00510000047718 Mus_A ANCESTRAL SPECIES 11 ENSGT00950000183216.d.j.b.a ENSGT00940000153523.b.b ENSGT00950000183216.d.j.b.b ENSGT00940000162084 ENSGT00940000159972 ENSGT00390000003207 ENSGT00940000162117 ENSGT00940000162852.a ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT01050000248522 ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00940000155183.e.c.b.a ENSGT00940000155183.e.c.b.b.a ENSGT00510000047718 ENSGT00940000158193 ENSGT00950000182895.a.b.j Mus_B ANCESTRAL SPECIES 10 ENSGT00950000183216.d.j.b.a ENSGT00940000153523.b.b ENSGT00950000183216.d.j.b.b ENSGT00940000162084 ENSGT00940000159972 ENSGT00390000003207 ENSGT00940000162117 ENSGT00940000162852.a ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT01050000248522 ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000158193 ENSGT00950000182895.a.b.j ENSGT00390000004977 ENSGT01090000259987.a.a.a.c Mouse MODERN SPECIES 1 Or7a42 (ENSMUSG00000094080) Or7a38 (ENSMUSG00000094673) Or7a39 (ENSMUSG00000062873) Or7c70 (ENSMUSG00000051190) Slc1a6 (ENSMUSG00000005357) Ccdc105 (ENSMUSG00000078442) Casp14 (ENSMUSG00000005355) Or1i2 (ENSMUSG00000071185) Syde1 (ENSMUSG00000032714) Ilvbl (ENSMUSG00000032763) Or10b1 (ENSMUSG00000107822) Pdxk (ENSMUSG00000032788) Cstb (ENSMUSG00000005054) Rrp1 (ENSMUSG00000061032) Gm56820 (ENSMUSG00000118646) Agpat3 (ENSMUSG00000001211) #22 Trappc10 (ENSMUSG00000000374) Pwp2 (ENSMUSG00000032834) Gatd3a (ENSMUSG00000053329) Icosl (ENSMUSG00000000732) Dnmt3l (ENSMUSG00000000730) Aire (ENSMUSG00000000731) Pfkl (ENSMUSG00000020277) Cfap410 (ENSMUSG00000020284) Trpm2 (ENSMUSG00000009292) Lrrc3 (ENSMUSG00000051652) Gm3285 (ENSMUSG00000111915) Gm10318 (ENSMUSG00000071195) Gm36176 (ENSMUSG00000112653) Krtap10-10 (ENSMUSG00000112223) Krtap10-4 (ENSMUSG00000069582) Mus_C ANCESTRAL SPECIES 7 ENSGT00940000163952.a.d ENSGT00940000153523.b.a ENSGT00950000183216.d.j.b.a ENSGT00940000153523.b.b ENSGT00940000162084 ENSGT00940000159972 ENSGT00390000003207 ENSGT00940000162117 ENSGT00940000162852.a ENSGT01030000234635.a.a.a.b ENSGT00940000158035 ENSGT00940000154227.b ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00940000155183.e.c.b.a ENSGT00510000047718 ENSGT00940000155183.e.d.a.b ENSGT00940000155183.f.a ENSGT00940000155183.e.c.b.b.b Steppe mouse MODERN SPECIES 3068 Or7a36 (ENSMSIG00000000611) Or7a37 (ENSMSIG00000000592) ENSMSIG00000000580 Or7c70 (ENSMSIG00000000575) Slc1a6 (ENSMSIG00000000543) Ccdc105 (ENSMSIG00000000509) Casp14 (ENSMSIG00000000458) ENSMSIG00000000436 Or1i2 (ENSMSIG00000000403) Syde1 (ENSMSIG00000000382) Ilvbl (ENSMSIG00000000223) Or10b1 (ENSMSIG00000000154) Pdxk (ENSMSIG00000000114) Cstb (ENSMSIG00000026515) Rrp1 (ENSMSIG00000026489) Agpat3 (ENSMSIG00000026402) #22 Trappc10 (ENSMSIG00000026358) Pwp2 (ENSMSIG00000026339) Gatd3a (ENSMSIG00000026316) Icosl (ENSMSIG00000026290) Dnmt3l (ENSMSIG00000026239) Aire (ENSMSIG00000025315) Pfkl (ENSMSIG00000025294) ENSMSIG00000025258 Trpm2 (ENSMSIG00000025139) ENSMSIG00000025134 Tspear (ENSMSIG00000025116) ENSMSIG00000025108 Gm19668 (ENSMSIG00000025103) Gm9639 (ENSMSIG00000025102) spretus MODERN SPECIES 1 Or7a37 (MGP_SPRETEiJ_G0016335) Or7a39 (MGP_SPRETEiJ_G0016334) MGP_SPRETEiJ_G0016332 MGP_SPRETEiJ_G0016333 Or7c70 (MGP_SPRETEiJ_G0016331) Slc1a6 (MGP_SPRETEiJ_G0016330) Ccdc105 (MGP_SPRETEiJ_G0016329) Casp14 (MGP_SPRETEiJ_G0016328) Or1i2 (MGP_SPRETEiJ_G0016327) Syde1 (MGP_SPRETEiJ_G0016326) Ilvbl (MGP_SPRETEiJ_G0016325) MGP_SPRETEiJ_G0016324 Pdxk (MGP_SPRETEiJ_G0016323) Cstb (MGP_SPRETEiJ_G0016322) Rrp1 (MGP_SPRETEiJ_G0016321) Agpat3 (MGP_SPRETEiJ_G0016320) #22 Trappc10 (MGP_SPRETEiJ_G0016319) Pwp2 (MGP_SPRETEiJ_G0016318) Gatd3a (MGP_SPRETEiJ_G0016317) Icosl (MGP_SPRETEiJ_G0016316) Dnmt3l (MGP_SPRETEiJ_G0016315) Aire (MGP_SPRETEiJ_G0016314) Pfkl (MGP_SPRETEiJ_G0016313) Cfap410 (MGP_SPRETEiJ_G0016312) Trpm2 (MGP_SPRETEiJ_G0016311) Lrrc3 (MGP_SPRETEiJ_G0016310) MGP_SPRETEiJ_G0016309 Tspear (MGP_SPRETEiJ_G0016308) MGP_SPRETEiJ_G0016307 Gm19668 (MGP_SPRETEiJ_G0016306) Gm10100 (MGP_SPRETEiJ_G0016305) Ryukyu mouse MODERN SPECIES 1 Or7a36 (MGP_CAROLIEiJ_G0015522) Or7a37 (MGP_CAROLIEiJ_G0015521) MGP_CAROLIEiJ_G0015519 Or7a39 (MGP_CAROLIEiJ_G0015520) Or7c70 (MGP_CAROLIEiJ_G0015518) Slc1a6 (MGP_CAROLIEiJ_G0015517) Ccdc105 (MGP_CAROLIEiJ_G0015516) Casp14 (MGP_CAROLIEiJ_G0015515) Or1i2 (MGP_CAROLIEiJ_G0015514) Syde1 (MGP_CAROLIEiJ_G0015513) Ilvbl (MGP_CAROLIEiJ_G0015512) MGP_CAROLIEiJ_G0015511 Pdxk (MGP_CAROLIEiJ_G0015510) Cstb (MGP_CAROLIEiJ_G0015509) Rrp1 (MGP_CAROLIEiJ_G0015508) Agpat3 (MGP_CAROLIEiJ_G0015507) #22 Trappc10 (MGP_CAROLIEiJ_G0015506) Pwp2 (MGP_CAROLIEiJ_G0015505) Gatd3a (MGP_CAROLIEiJ_G0015504) Icosl (MGP_CAROLIEiJ_G0015503) Dnmt3l (MGP_CAROLIEiJ_G0015502) Aire (MGP_CAROLIEiJ_G0015501) Pfkl (MGP_CAROLIEiJ_G0015500) Cfap410 (MGP_CAROLIEiJ_G0015499) MGP_CAROLIEiJ_G0015498 Lrrc3 (MGP_CAROLIEiJ_G0015497) Tspear (MGP_CAROLIEiJ_G0015496) Krtap10-10 (MGP_CAROLIEiJ_G0015495) MGP_CAROLIEiJ_G0015494 Gm19668 (MGP_CAROLIEiJ_G0015493) MGP_CAROLIEiJ_G0015492 Shrew mouse MODERN SPECIES 22 Or7a36 (MGP_PahariEiJ_G0030935) Or7a37 (MGP_PahariEiJ_G0030934) MGP_PahariEiJ_G0030932 Or7a39 (MGP_PahariEiJ_G0030933) Or7c70 (MGP_PahariEiJ_G0030931) MGP_PahariEiJ_G0030930 Slc1a6 (MGP_PahariEiJ_G0030929) Ccdc105 (MGP_PahariEiJ_G0030928) Casp14 (MGP_PahariEiJ_G0030927) Or1i2 (MGP_PahariEiJ_G0030926) Syde1 (MGP_PahariEiJ_G0030925) Ilvbl (MGP_PahariEiJ_G0030924) Pdxk (MGP_PahariEiJ_G0030923) Cstb (MGP_PahariEiJ_G0030922) Rrp1 (MGP_PahariEiJ_G0030921) Agpat3 (MGP_PahariEiJ_G0030920) #22 Trappc10 (MGP_PahariEiJ_G0030919) Pwp2 (MGP_PahariEiJ_G0030918) Gatd3a (MGP_PahariEiJ_G0030917) MGP_PahariEiJ_G0030916 Dnmt3l (MGP_PahariEiJ_G0030915) Aire (MGP_PahariEiJ_G0030914) Pfkl (MGP_PahariEiJ_G0030913) Cfap410 (MGP_PahariEiJ_G0030912) MGP_PahariEiJ_G0030911 Lrrc3 (MGP_PahariEiJ_G0030910) Tspear (MGP_PahariEiJ_G0030909) MGP_PahariEiJ_G0030908 MGP_PahariEiJ_G0030907 MGP_PahariEiJ_G0030906 MGP_PahariEiJ_G0030905 Rat MODERN SPECIES 12 Slc37a1 (ENSRNOG00000001169) Pde9a (ENSRNOG00000001174) Wdr4 (ENSRNOG00000001181) Ndufv3 (ENSRNOG00000001182) Pknox1 (ENSRNOG00000001184) Cbs (ENSRNOG00000029528) U2af1 (ENSRNOG00000045860) Sik1 (ENSRNOG00000001189) Hsf2bp (ENSRNOG00000001193) Rrp1b (ENSRNOG00000001194) RGD1566085 (ENSRNOG00000068407) Pdxk (ENSRNOG00000049937) Cstb (ENSRNOG00000001201) Rrp1 (ENSRNOG00000001203) Gm56820 (ENSRNOG00000062695) Agpat3 (ENSRNOG00000001205) #22 Trappc10 (ENSRNOG00000023210) Pwp2 (ENSRNOG00000001210) Gatd3a (ENSRNOG00000001211) Icoslg (ENSRNOG00000023109) Dnmt3l (ENSRNOG00000001212) Aire (ENSRNOG00000001213) Pfkl (ENSRNOG00000001214) Cfap410 (ENSRNOG00000001215) Trpm2 (ENSRNOG00000001216) Lrrc3 (ENSRNOG00000001217) Tspear (ENSRNOG00000001219) LOC100365646 (ENSRNOG00000001218) LOC120098854 (ENSRNOG00000067436) LOC120098855 (ENSRNOG00000042329) LOC690415 (ENSRNOG00000069553) Cricetidae ANCESTRAL SPECIES 9 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989.t ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183.e.a.b ENSGT00940000161526.b ENSGT00940000155183.f ENSGT00940000158193 Cricetidae_B ANCESTRAL SPECIES 12 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989.t ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000158193 ENSGT00950000182895.a.b.j ENSGT00390000004977 ENSGT01090000259987.a.a.a.c Prairie vole MODERN SPECIES 352 Rsph1 (ENSMOCG00000003255) Slc37a1 (ENSMOCG00000013618) Pde9a (ENSMOCG00000012568) Wdr4 (ENSMOCG00000022127) ENSMOCG00000021683 Pknox1 (ENSMOCG00000000944) Cbs (ENSMOCG00000010781) U2af1 (ENSMOCG00000003736) Cryaa (ENSMOCG00000001790) Sik1 (ENSMOCG00000000510) Hsf2bp (ENSMOCG00000006152) Rrp1b (ENSMOCG00000001117) Pdxk (ENSMOCG00000006016) Cstb (ENSMOCG00000022035) Rrp1 (ENSMOCG00000015687) ENSMOCG00000010991 #22 Trappc10 (ENSMOCG00000006082) Pwp2 (ENSMOCG00000003844) Gatd3a (ENSMOCG00000019921) Icosl (ENSMOCG00000018242) Dnmt3l (ENSMOCG00000022517) Aire (ENSMOCG00000008071) ENSMOCG00000013045 Cfap410 (ENSMOCG00000020426) Trpm2 (ENSMOCG00000019856) Lrrc3 (ENSMOCG00000017485) ENSMOCG00000016139 ENSMOCG00000015079 ENSMOCG00000014262 ENSMOCG00000013216 ENSMOCG00000004341 Northern American deer mouse MODERN SPECIES 13 Pde9a (ENSPEMG00000023664) Wdr4 (ENSPEMG00000022550) Ndufv3 (ENSPEMG00000022595) Pknox1 (ENSPEMG00000021492) Cbs (ENSPEMG00000021739) U2af1 (ENSPEMG00000021041) ENSPEMG00000027416 Cryaa (ENSPEMG00000021591) Sik1 (ENSPEMG00000024129) Hsf2bp (ENSPEMG00000021638) Rrp1b (ENSPEMG00000022490) ENSPEMG00000023225 ENSPEMG00000030967 Cstb (ENSPEMG00000025261) Rrp1 (ENSPEMG00000018421) Agpat3 (ENSPEMG00000016159) #22 Trappc10 (ENSPEMG00000023811) Pwp2 (ENSPEMG00000009968) Gatd3a (ENSPEMG00000023416) ENSPEMG00000007525 Dnmt3l (ENSPEMG00000009203) Aire (ENSPEMG00000022217) Pfkl (ENSPEMG00000022772) Cfap410 (ENSPEMG00000022711) Trpm2 (ENSPEMG00000012456) Lrrc3 (ENSPEMG00000030505) Tspear (ENSPEMG00000016261) ENSPEMG00000023368 ENSPEMG00000021662 ENSPEMG00000029694 ENSPEMG00000026871 Cricetinae ANCESTRAL SPECIES 24 ENSGT00940000157240 ENSGT00940000159245 ENSGT00940000155587.a.b ENSGT00390000012174 ENSGT00390000012196 ENSGT00940000159505.x ENSGT00510000047027 ENSGT00950000183152.B.c.a ENSGT00940000160159 ENSGT00940000154989.t ENSGT00390000008490 ENSGT00390000011821.a ENSGT00390000003874 ENSGT00940000154826 ENSGT00390000011821.b ENSGT00950000182836.b.b.b.a #22 ENSGT00390000003873 ENSGT00550000074981 ENSGT00390000003706.a.a ENSGT00940000161590 ENSGT00940000162228 ENSGT00940000161104 ENSGT00940000159292 ENSGT00390000018807 ENSGT00940000156404 ENSGT00940000154360.A.b ENSGT00510000047718 ENSGT00940000155183.e.a.b.a.b ENSGT00940000161526.b ENSGT00940000155183.f ENSGT00940000155183.e.a.b.a.a Golden Hamster MODERN SPECIES 641 Tmprss3 (ENSMAUG00000020969) Ubash3a (ENSMAUG00000019578) Rsph1 (ENSMAUG00000014285) Slc37a1 (ENSMAUG00000021076) Pde9a (ENSMAUG00000001943) Wdr4 (ENSMAUG00000020696) Ndufv3 (ENSMAUG00000020188) Pknox1 (ENSMAUG00000015669) Cbs (ENSMAUG00000020960) U2af1 (ENSMAUG00000020528) Cryaa (ENSMAUG00000017095) Sik1 (ENSMAUG00000018473) Hsf2bp (ENSMAUG00000018607) Rrp1b (ENSMAUG00000021508) Rrp1 (ENSMAUG00000017653) Agpat3 (ENSMAUG00000019017) #22 Trappc10 (ENSMAUG00000021971) Pwp2 (ENSMAUG00000020265) Icosl (ENSMAUG00000019140) Dnmt3l (ENSMAUG00000019680) Aire (ENSMAUG00000021943) Pfkl (ENSMAUG00000017741) Cfap410 (ENSMAUG00000018378) Trpm2 (ENSMAUG00000005011) Lrrc3 (ENSMAUG00000021907) Tspear (ENSMAUG00000011883) ENSMAUG00000012939 ENSMAUG00000007884 ENSMAUG00000021981 ENSMAUG00000002462 ENSMAUG00000021040 Chinese hamster chok1gshd MODERN SPECIES 204 ENSCGRG00001003985 ENSCGRG00001010889 ENSCGRG00001019133 ENSCGRG00001016759 ENSCGRG00001005047 ENSCGRG00001023882 ENSCGRG00001021534 Cstb (ENSCGRG00001023703) Rrp1 (ENSCGRG00001011920) Agpat3 (ENSCGRG00001023999) #22 Trappc10 (ENSCGRG00001019791) Pwp2 (ENSCGRG00001020074) Gatd3a (ENSCGRG00001019921) Icosl (ENSCGRG00001009599) Dnmt3l (ENSCGRG00001016841) Aire (ENSCGRG00001021441) Pfkl (ENSCGRG00001015753) Cfap410 (ENSCGRG00001007084) Trpm2 (ENSCGRG00001014379) Lrrc3 (ENSCGRG00001011603) Tspear (ENSCGRG00001017931) ENSCGRG00001013139 ENSCGRG00001017382 Gm36176 (ENSCGRG00001022992) ENSCGRG00001000038 Upper Galilee mountains blind mole rat MODERN SPECIES 557 Rsph1 (ENSNGAG00000005022) Slc37a1 (ENSNGAG00000022440) Pde9a (ENSNGAG00000014370) Wdr4 (ENSNGAG00000017117) Ndufv3 (ENSNGAG00000011220) Pknox1 (ENSNGAG00000015912) Cbs (ENSNGAG00000011354) U2af1 (ENSNGAG00000021641) Cryaa (ENSNGAG00000024156) Sik1 (ENSNGAG00000015397) Hsf2bp (ENSNGAG00000002647) Rrp1b (ENSNGAG00000021073) Pdxk (ENSNGAG00000011007) Cstb (ENSNGAG00000001985) ENSNGAG00000022344 Agpat3 (ENSNGAG00000023781) #22 ENSNGAG00000020131 Pwp2 (ENSNGAG00000021106) Gatd3a (ENSNGAG00000023649) ENSNGAG00000007536 Dnmt3l (ENSNGAG00000004497) Aire (ENSNGAG00000006411) Pfkl (ENSNGAG00000023632) Cfap410 (ENSNGAG00000008743) Trpm2 (ENSNGAG00000015763) Lrrc3 (ENSNGAG00000024059) Tspear (ENSNGAG00000022570) ENSNGAG00000012871 ENSNGAG00000023342 ENSNGAG00000000805 Lesser Egyptian jerboa MODERN SPECIES 54 Slc37a1 (ENSJJAG00000009176) Pde9a (ENSJJAG00000022814) Wdr4 (ENSJJAG00000016232) ENSJJAG00000012928 ENSJJAG00000022210 Pknox1 (ENSJJAG00000003326) Cbs (ENSJJAG00000019675) U2af1 (ENSJJAG00000000485) Cryaa (ENSJJAG00000008890) Sik1 (ENSJJAG00000021978) Hsf2bp (ENSJJAG00000011558) Rrp1b (ENSJJAG00000021279) Pdxk (ENSJJAG00000016609) ENSJJAG00000019836 Rrp1 (ENSJJAG00000018886) Agpat3 (ENSJJAG00000019770) #22 Lbh (ENSJJAG00000023694) Lclat1 (ENSJJAG00000015441) ##22 Capn13 (ENSJJAG00000015680) Galnt14 (ENSJJAG00000020390) Ehd3 (ENSJJAG00000013415) Xdh (ENSJJAG00000017980) Lagomorpha ANCESTRAL SPECIES ENSGT00950000182836.b.b.b.a #22 Pika MODERN SPECIES 2592 AGPAT3 (ENSOPRG00000013786) #22