Euarchontoglires	ANCESTRAL SPECIES	2	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #14	ENSGT00940000158193 #11
Euarchontoglires_A	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #14	ENSGT00940000155183 #15
Glires	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000163258 #14	ENSGT00940000163441.f.a.a.a	ENSGT00940000158579	ENSGT00940000163845
Rodentia	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183 #15	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10	ENSGT00390000004977 #9
Rodentia_A	ANCESTRAL SPECIES	5	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183 #15	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10	ENSGT00390000004977 #9
Hystricomorpha	ANCESTRAL SPECIES	60	ENSGT00940000162185	ENSGT00950000183022.b	ENSGT00940000158212.B	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709 #7	ENSGT01090000259987.a.a.a #8	ENSGT00390000004977 #9	ENSGT00950000182895.a.b.j ##10	ENSGT00940000158193 #11	ENSGT00940000155183 #15	ENSGT00510000047718 #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00530000064267	ENSGT00940000154678.a.a #37	ENSGT00940000159548 #36	ENSGT00950000183004.a.b.a.b #34	ENSGT00940000155686.n.b #35
Hystricomorpha_a	ANCESTRAL SPECIES	37	ENSGT00940000162185	ENSGT00950000183022.b	ENSGT00940000158212.B	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709 #7	ENSGT01090000259987.a.a.a #8	ENSGT00390000004977 #9	ENSGT00950000182895.a.b.j ##10	ENSGT00940000158193 #11	ENSGT00940000155183 #15	ENSGT00510000047718 #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00530000064267	ENSGT00940000154678.a.a #37	ENSGT00940000159548 #36	ENSGT00950000183004.a.b.a.b #34	ENSGT00940000155686.n.b #35
Hystricomorpha_b	ANCESTRAL SPECIES	34	ENSGT00940000162185	ENSGT00950000183022.b	ENSGT00940000158212.B	ENSGT00390000007989	ENSGT00940000155992	ENSGT00390000015709 #7	ENSGT01090000259987.a.a.a #8	ENSGT00390000004977 #9	ENSGT00950000182895.a.a.a.b.f ##10	ENSGT00940000158193 #11	ENSGT00940000155183 #15	ENSGT00510000047718 #18	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00530000064267	ENSGT00940000154678.a.a #37	ENSGT00940000159548 #36	ENSGT00950000183004.a.b.a.b #34	ENSGT00940000155686.n.b #35
Long-tailed chinchilla	MODERN SPECIES	114	SLX9 (ENSCLAG00000015540) #7	ITGB2 (ENSCLAG00000011530) #8	PTTG1IP (ENSCLAG00000008686) #9	ENSCLAG00000006914 #10	UBE2G2 (ENSCLAG00000006675) #11	ENSCLAG00000006283 #12	ENSCLAG00000005933 #13	ENSCLAG00000005246 #14	ENSCLAG00000004501 #15	ENSCLAG00000007645 #16	ENSCLAG00000005431 #17	TSPEAR (ENSCLAG00000006788) #18	PDXK (ENSCLAG00000004982) #19	CSTB (ENSCLAG00000009970) #20	RRP1 (ENSCLAG00000011639) #21	AGPAT3 (ENSCLAG00000005641) #22	TRAPPC10 (ENSCLAG00000004935) #23	PWP2 (ENSCLAG00000009503) #24	GATD3 (ENSCLAG00000006863) #25	ICOSLG (ENSCLAG00000004572) #26	DNMT3L (ENSCLAG00000008128) #27	AIRE (ENSCLAG00000004699) #28	PFKL (ENSCLAG00000006907) #29	CFAP410 (ENSCLAG00000005977) #30	TRPM2 (ENSCLAG00000007001) #31	LRRC3 (ENSCLAG00000006488) #32	TMPRSS2 (ENSCLAG00000006480) #33	FAM3B (ENSCLAG00000005832) #34	ENSCLAG00000006920 #35	BACE2 (ENSCLAG00000006208) #36	DSCAM (ENSCLAG00000016317) #37
Degu	MODERN SPECIES	86	COL6A2 (ENSODEG00000013531)	ENSODEG00000020105	ENSODEG00000013981	PCBP3 (ENSODEG00000012873)	ENSODEG00000013398	ENSODEG00000020203	POFUT2 (ENSODEG00000013451)	ADARB1 (ENSODEG00000014508)	ITGB2 (ENSODEG00000013569) #8	PTTG1IP (ENSODEG00000013537) #9	ENSODEG00000013838 ##10	ENSODEG00000014012 #11	ENSODEG00000013439 #15	TSPEAR (ENSODEG00000013818) #18	PDXK (ENSODEG00000013386) #19	AGPAT3 (ENSODEG00000012787) #22	ENSODEG00000013648 #23	PWP2 (ENSODEG00000013073) #24	ENSODEG00000013954 #25	PFKL (ENSODEG00000014418) #29	CFAP410 (ENSODEG00000012840) #30	TRPM2 (ENSODEG00000013043) #31	LRRC3 (ENSODEG00000020091) #32	DSCAM (ENSODEG00000012858) #37	BACE2 (ENSODEG00000013570) #36	ENSODEG00000014232 #34	ENSODEG00000013917 #35	TMPRSS2 (ENSODEG00000013358) #33	RIPK4 (ENSODEG00000013779)	PRDM15 (ENSODEG00000013112)	C2CD2 (ENSODEG00000014616)
Guinea pig	MODERN SPECIES	90	ADARB1 (ENSCPOG00000022969)	SLX9 (ENSCPOG00000036519) #7	ITGB2 (ENSCPOG00000025922) #8	PTTG1IP (ENSCPOG00000023250) #9	SUMO3 (ENSCPOG00000025203) ##10	UBE2G2 (ENSCPOG00000035970) #11	ENSCPOG00000037876 #15	ENSCPOG00000032969 #15	ENSCPOG00000038786 #15	ENSCPOG00000034347 #15	TSPEAR (ENSCPOG00000004362) #18	ENSCPOG00000036402 #15	PDXK (ENSCPOG00000039719) #19	CSTB (ENSCPOG00000031855) #20	RRP1 (ENSCPOG00000038986) #21	AGPAT3 (ENSCPOG00000032718) #22	TRAPPC10 (ENSCPOG00000011117) #23	PWP2 (ENSCPOG00000023616) #24	GATD3 (ENSCPOG00000011419) #25	DNMT3L (ENSCPOG00000004070) #27	AIRE (ENSCPOG00000019868) #28	PFKL (ENSCPOG00000019438) #29	CFAP410 (ENSCPOG00000009611) #30	TRPM2 (ENSCPOG00000023512) #31	LRRC3 (ENSCPOG00000030436) #32	PCP4 (ENSCPOG00000039173)	DSCAM (ENSCPOG00000005367) #37	BACE2 (ENSCPOG00000007403) #36	ENSCPOG00000025373 #35	ENSCPOG00000013108 #34	ENSCPOG00000021489 #33
Naked mole-rat female	MODERN SPECIES	11	SLX9 (ENSHGLG00000045493) #7	ITGB2 (ENSHGLG00000013472) #8	ENSHGLG00000049629	PTTG1IP (ENSHGLG00000033185) #9	ENSHGLG00000037860 ##10	ENSHGLG00000009258 #11	ENSHGLG00000014199 #18	ENSHGLG00000005505 #15	ENSHGLG00000043957 #12	ENSHGLG00000038544 #15	ENSHGLG00000007283 #14	ENSHGLG00000015985	ENSHGLG00000046004 #19	CSTB (ENSHGLG00000047009) #20	RRP1 (ENSHGLG00000050109) #21	AGPAT3 (ENSHGLG00000048529) #22	TRAPPC10 (ENSHGLG00000013176) #23	PWP2 (ENSHGLG00000017401) #24	ENSHGLG00000018104 #25	ENSHGLG00000013877 #26	ENSHGLG00000009448 #27	AIRE (ENSHGLG00000016716) #28	PFKL (ENSHGLG00000017234) #29	ENSHGLG00000016027 #30	TRPM2 (ENSHGLG00000018785) #31	ENSHGLG00000042683 #32	PCP4 (ENSHGLG00000043480)	ENSHGLG00000005193 #37	ENSHGLG00000008616	ENSHGLG00000006993 #36	ENSHGLG00000041834 #35
Sciuridae	ANCESTRAL SPECIES	12	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #8
Marmotini	ANCESTRAL SPECIES	13	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.lb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j.o ##10	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a #8
Alpin marmot	MODERN SPECIES	4	SLC37A1 (ENSMMMG00000010809)	PDE9A (ENSMMMG00000010894)	WDR4 (ENSMMMG00000011036)	ENSMMMG00000011055	PKNOX1 (ENSMMMG00000011067)	CBS (ENSMMMG00000011087)	U2AF1 (ENSMMMG00000011117)	CRYAA (ENSMMMG00000011152)	SIK1 (ENSMMMG00000011169)	HSF2BP (ENSMMMG00000011193)	RRP1B (ENSMMMG00000011209) ##21	PDXK (ENSMMMG00000011250) #19	ENSMMMG00000011256 #20	RRP1 (ENSMMMG00000011263) #21	ENSMMMG00000011344	AGPAT3 (ENSMMMG00000011363) #22	TRAPPC10 (ENSMMMG00000011441) #23	PWP2 (ENSMMMG00000011468) #24	GATD3 (ENSMMMG00000012356) #25	ICOSLG (ENSMMMG00000012361) #26	ENSMMMG00000012363 #27	AIRE (ENSMMMG00000012367) #28	ENSMMMG00000012488 #29	CFAP410 (ENSMMMG00000012554) #30	TRPM2 (ENSMMMG00000012573) #31	LRRC3 (ENSMMMG00000012614) #32	TSPEAR (ENSMMMG00000012623) #18	ENSMMMG00000012640 #14	ENSMMMG00000012650	ENSMMMG00000012657	UBE2G2 (ENSMMMG00000012664) #11
Marmotini_b	ANCESTRAL SPECIES	30	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.lb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a.db #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32
Arctic ground squirrel	MODERN SPECIES	443	RSPH1 (ENSUPAG00010003495)	SLC37A1 (ENSUPAG00010003472)	PDE9A (ENSUPAG00010003388)	WDR4 (ENSUPAG00010003363)	ENSUPAG00010003358	PKNOX1 (ENSUPAG00010003344)	CBS (ENSUPAG00010003327)	U2AF1 (ENSUPAG00010003308)	CRYAA (ENSUPAG00010003295)	SIK1 (ENSUPAG00010003268)	HSF2BP (ENSUPAG00010003260)	RRP1B (ENSUPAG00010003249) ##21	PDXK (ENSUPAG00010003236) #19	ENSUPAG00010003225 #20	RRP1 (ENSUPAG00010003195) #21	AGPAT3 (ENSUPAG00010003091) #22	TRAPPC10 (ENSUPAG00010003060) #23	PWP2 (ENSUPAG00010003026) #24	GATD3 (ENSUPAG00010003022) #25	ICOSLG (ENSUPAG00010003013) #26	DNMT3L (ENSUPAG00010003002) #27	AIRE (ENSUPAG00010002765) #28	PFKL (ENSUPAG00010002724) #29	CFAP410 (ENSUPAG00010002705) #30	TRPM2 (ENSUPAG00010002652) #31	LRRC3 (ENSUPAG00010002648) #32
Squirrel	MODERN SPECIES	100	RSPH1 (ENSSTOG00000002331)	SLC37A1 (ENSSTOG00000025445)	PDE9A (ENSSTOG00000001452)	WDR4 (ENSSTOG00000000442)	NDUFV3 (ENSSTOG00000000445)	PKNOX1 (ENSSTOG00000000447)	CBS (ENSSTOG00000024905)	U2AF1 (ENSSTOG00000012766)	CRYAA (ENSSTOG00000019571)	SIK1 (ENSSTOG00000003810)	HSF2BP (ENSSTOG00000011783)	RRP1B (ENSSTOG00000011790) ##21	PDXK (ENSSTOG00000007194) #19	CSTB (ENSSTOG00000025748) #20	RRP1 (ENSSTOG00000011116) #21	AGPAT3 (ENSSTOG00000010466) #22	TRAPPC10 (ENSSTOG00000029008) #23	PWP2 (ENSSTOG00000014194) #24	ENSSTOG00000029443 #25	ICOSLG (ENSSTOG00000026567) #26	DNMT3L (ENSSTOG00000028895) #27	AIRE (ENSSTOG00000023870) #28	PFKL (ENSSTOG00000026523) #29	CFAP410 (ENSSTOG00000008553) #30	TRPM2 (ENSSTOG00000024472) #31	LRRC3 (ENSSTOG00000023533) #32
Eurasian red squirrel	MODERN SPECIES	1	PDE9A (ENSSVLG00005011481)	ENSSVLG00005011248	WDR4 (ENSSVLG00005025158)	ENSSVLG00005025141	PKNOX1 (ENSSVLG00005025120)	CBS (ENSSVLG00005025055)	U2AF1 (ENSSVLG00005024981)	CRYAA (ENSSVLG00005024913)	ENSSVLG00005024890	ENSSVLG00005024861	HSF2BP (ENSSVLG00005024842)	ENSSVLG00005024819 ##21	PDXK (ENSSVLG00005024785) #19	CSTB (ENSSVLG00005024758) #20	RRP1 (ENSSVLG00005024724) #21	AGPAT3 (ENSSVLG00005024678) #22	TRAPPC10 (ENSSVLG00005024638) #23	PWP2 (ENSSVLG00005024557) #24	GATD3 (ENSSVLG00005024474) #25	ICOSLG (ENSSVLG00005024369) #26	ENSSVLG00005024326 #27	AIRE (ENSSVLG00005023997) #28	PFKL (ENSSVLG00005023925) #29	CFAP410 (ENSSVLG00005023882) #30	TRPM2 (ENSSVLG00005023598) #31	LRRC3 (ENSSVLG00005023556) #32	ENSSVLG00005023369 #14	ENSSVLG00005023080	ENSSVLG00005022707	ENSSVLG00005022624	TSPEAR (ENSSVLG00005022529) #18
Rodentia_B	ANCESTRAL SPECIES	2	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183 #15	ENSGT00940000161526.b	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10
Myomorpha	ANCESTRAL SPECIES	14	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183 #15	ENSGT00940000161526.b	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10
Muroidea	ANCESTRAL SPECIES	11	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183 #15	ENSGT00940000161526.b	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989.t	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183.e #15	ENSGT00940000161526.b	ENSGT00940000155183.f #15	ENSGT00940000158193 #11
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989.t	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183.e #15	ENSGT00940000161526.b	ENSGT00940000155183.f #15	ENSGT00940000158193 #11
Mus	ANCESTRAL SPECIES	15	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000161526.b.r.b.b	ENSGT00940000155183.e.c #15	ENSGT00940000155183.f.a #15	ENSGT00940000155183.e.d.a #15	ENSGT00510000047718 #18
Mus_A	ANCESTRAL SPECIES	11	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000155183.e.c.b.a #15	ENSGT00940000155183.e.c.b.b.a #15	ENSGT00510000047718 #18	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10
Mus_B	ANCESTRAL SPECIES	10	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00950000183216.d.j.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01050000248522	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #8
Mouse	MODERN SPECIES	1	Or7a42 (ENSMUSG00000094080)	Or7a38 (ENSMUSG00000094673)	Or7a39 (ENSMUSG00000062873)	Or7c70 (ENSMUSG00000051190)	Slc1a6 (ENSMUSG00000005357)	Ccdc105 (ENSMUSG00000078442)	Casp14 (ENSMUSG00000005355)	Or1i2 (ENSMUSG00000071185)	Syde1 (ENSMUSG00000032714)	Ilvbl (ENSMUSG00000032763)	Or10b1 (ENSMUSG00000107822)	Pdxk (ENSMUSG00000032788) #19	Cstb (ENSMUSG00000005054) #20	Rrp1 (ENSMUSG00000061032) #21	Gm56820 (ENSMUSG00000118646)	Agpat3 (ENSMUSG00000001211) #22	Trappc10 (ENSMUSG00000000374) #23	Pwp2 (ENSMUSG00000032834) #24	Gatd3a (ENSMUSG00000053329) #25	Icosl (ENSMUSG00000000732) #26	Dnmt3l (ENSMUSG00000000730) #27	Aire (ENSMUSG00000000731) #28	Pfkl (ENSMUSG00000020277) #29	Cfap410 (ENSMUSG00000020284) #30	Trpm2 (ENSMUSG00000009292) #31	Lrrc3 (ENSMUSG00000051652) #32	Gm3285 (ENSMUSG00000111915) #15	Gm10318 (ENSMUSG00000071195) #15	Gm36176 (ENSMUSG00000112653) #15	Krtap10-10 (ENSMUSG00000112223) #15	Krtap10-4 (ENSMUSG00000069582) #15
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000163952.a.d	ENSGT00940000153523.b.a	ENSGT00950000183216.d.j.b.a	ENSGT00940000153523.b.b	ENSGT00940000162084	ENSGT00940000159972	ENSGT00390000003207	ENSGT00940000162117	ENSGT00940000162852.a	ENSGT01030000234635.a.a.a.b	ENSGT00940000158035	ENSGT00940000154227.b	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000155183.e.c.b.a #15	ENSGT00510000047718 #18	ENSGT00940000155183.e.d.a.b #15	ENSGT00940000155183.f.a #15	ENSGT00940000155183.e.c.b.b.b #15
Steppe mouse	MODERN SPECIES	3068	Or7a36 (ENSMSIG00000000611)	Or7a37 (ENSMSIG00000000592)	ENSMSIG00000000580	Or7c70 (ENSMSIG00000000575)	Slc1a6 (ENSMSIG00000000543)	Ccdc105 (ENSMSIG00000000509)	Casp14 (ENSMSIG00000000458)	ENSMSIG00000000436	Or1i2 (ENSMSIG00000000403)	Syde1 (ENSMSIG00000000382)	Ilvbl (ENSMSIG00000000223)	Or10b1 (ENSMSIG00000000154)	Pdxk (ENSMSIG00000000114) #19	Cstb (ENSMSIG00000026515) #20	Rrp1 (ENSMSIG00000026489) #21	Agpat3 (ENSMSIG00000026402) #22	Trappc10 (ENSMSIG00000026358) #23	Pwp2 (ENSMSIG00000026339) #24	Gatd3a (ENSMSIG00000026316) #25	Icosl (ENSMSIG00000026290) #26	Dnmt3l (ENSMSIG00000026239) #27	Aire (ENSMSIG00000025315) #28	Pfkl (ENSMSIG00000025294) #29	ENSMSIG00000025258	Trpm2 (ENSMSIG00000025139) #31	ENSMSIG00000025134 #32	Tspear (ENSMSIG00000025116) #18	ENSMSIG00000025108 #15	Gm19668 (ENSMSIG00000025103) #15	Gm9639 (ENSMSIG00000025102) #15
spretus	MODERN SPECIES	1	Or7a37 (MGP_SPRETEiJ_G0016335)	Or7a39 (MGP_SPRETEiJ_G0016334)	MGP_SPRETEiJ_G0016332	MGP_SPRETEiJ_G0016333	Or7c70 (MGP_SPRETEiJ_G0016331)	Slc1a6 (MGP_SPRETEiJ_G0016330)	Ccdc105 (MGP_SPRETEiJ_G0016329)	Casp14 (MGP_SPRETEiJ_G0016328)	Or1i2 (MGP_SPRETEiJ_G0016327)	Syde1 (MGP_SPRETEiJ_G0016326)	Ilvbl (MGP_SPRETEiJ_G0016325)	MGP_SPRETEiJ_G0016324	Pdxk (MGP_SPRETEiJ_G0016323) #19	Cstb (MGP_SPRETEiJ_G0016322) #20	Rrp1 (MGP_SPRETEiJ_G0016321) #21	Agpat3 (MGP_SPRETEiJ_G0016320) #22	Trappc10 (MGP_SPRETEiJ_G0016319) #23	Pwp2 (MGP_SPRETEiJ_G0016318) #24	Gatd3a (MGP_SPRETEiJ_G0016317) #25	Icosl (MGP_SPRETEiJ_G0016316) #26	Dnmt3l (MGP_SPRETEiJ_G0016315) #27	Aire (MGP_SPRETEiJ_G0016314) #28	Pfkl (MGP_SPRETEiJ_G0016313) #29	Cfap410 (MGP_SPRETEiJ_G0016312) #30	Trpm2 (MGP_SPRETEiJ_G0016311) #31	Lrrc3 (MGP_SPRETEiJ_G0016310) #32	MGP_SPRETEiJ_G0016309 #15	Tspear (MGP_SPRETEiJ_G0016308) #18	MGP_SPRETEiJ_G0016307 #15	Gm19668 (MGP_SPRETEiJ_G0016306) #15	Gm10100 (MGP_SPRETEiJ_G0016305)
Ryukyu mouse	MODERN SPECIES	1	Or7a36 (MGP_CAROLIEiJ_G0015522)	Or7a37 (MGP_CAROLIEiJ_G0015521)	MGP_CAROLIEiJ_G0015519	Or7a39 (MGP_CAROLIEiJ_G0015520)	Or7c70 (MGP_CAROLIEiJ_G0015518)	Slc1a6 (MGP_CAROLIEiJ_G0015517)	Ccdc105 (MGP_CAROLIEiJ_G0015516)	Casp14 (MGP_CAROLIEiJ_G0015515)	Or1i2 (MGP_CAROLIEiJ_G0015514)	Syde1 (MGP_CAROLIEiJ_G0015513)	Ilvbl (MGP_CAROLIEiJ_G0015512)	MGP_CAROLIEiJ_G0015511	Pdxk (MGP_CAROLIEiJ_G0015510) #19	Cstb (MGP_CAROLIEiJ_G0015509) #20	Rrp1 (MGP_CAROLIEiJ_G0015508) #21	Agpat3 (MGP_CAROLIEiJ_G0015507) #22	Trappc10 (MGP_CAROLIEiJ_G0015506) #23	Pwp2 (MGP_CAROLIEiJ_G0015505) #24	Gatd3a (MGP_CAROLIEiJ_G0015504) #25	Icosl (MGP_CAROLIEiJ_G0015503) #26	Dnmt3l (MGP_CAROLIEiJ_G0015502) #27	Aire (MGP_CAROLIEiJ_G0015501) #28	Pfkl (MGP_CAROLIEiJ_G0015500) #29	Cfap410 (MGP_CAROLIEiJ_G0015499) #30	MGP_CAROLIEiJ_G0015498 #31	Lrrc3 (MGP_CAROLIEiJ_G0015497) #32	Tspear (MGP_CAROLIEiJ_G0015496) #18	Krtap10-10 (MGP_CAROLIEiJ_G0015495) #15	MGP_CAROLIEiJ_G0015494 #15	Gm19668 (MGP_CAROLIEiJ_G0015493) #15	MGP_CAROLIEiJ_G0015492 #15
Shrew mouse	MODERN SPECIES	22	Or7a36 (MGP_PahariEiJ_G0030935)	Or7a37 (MGP_PahariEiJ_G0030934)	MGP_PahariEiJ_G0030932	Or7a39 (MGP_PahariEiJ_G0030933)	Or7c70 (MGP_PahariEiJ_G0030931)	MGP_PahariEiJ_G0030930	Slc1a6 (MGP_PahariEiJ_G0030929)	Ccdc105 (MGP_PahariEiJ_G0030928)	Casp14 (MGP_PahariEiJ_G0030927)	Or1i2 (MGP_PahariEiJ_G0030926)	Syde1 (MGP_PahariEiJ_G0030925)	Ilvbl (MGP_PahariEiJ_G0030924)	Pdxk (MGP_PahariEiJ_G0030923) #19	Cstb (MGP_PahariEiJ_G0030922) #20	Rrp1 (MGP_PahariEiJ_G0030921) #21	Agpat3 (MGP_PahariEiJ_G0030920) #22	Trappc10 (MGP_PahariEiJ_G0030919) #23	Pwp2 (MGP_PahariEiJ_G0030918) #24	Gatd3a (MGP_PahariEiJ_G0030917) #25	MGP_PahariEiJ_G0030916 #26	Dnmt3l (MGP_PahariEiJ_G0030915) #27	Aire (MGP_PahariEiJ_G0030914) #28	Pfkl (MGP_PahariEiJ_G0030913) #29	Cfap410 (MGP_PahariEiJ_G0030912) #30	MGP_PahariEiJ_G0030911 #31	Lrrc3 (MGP_PahariEiJ_G0030910) #32	Tspear (MGP_PahariEiJ_G0030909) #18	MGP_PahariEiJ_G0030908 #15	MGP_PahariEiJ_G0030907 #15	MGP_PahariEiJ_G0030906 #15	MGP_PahariEiJ_G0030905
Rat	MODERN SPECIES	12	Slc37a1 (ENSRNOG00000001169)	Pde9a (ENSRNOG00000001174)	Wdr4 (ENSRNOG00000001181)	Ndufv3 (ENSRNOG00000001182)	Pknox1 (ENSRNOG00000001184)	Cbs (ENSRNOG00000029528)	U2af1 (ENSRNOG00000045860)	Sik1 (ENSRNOG00000001189)	Hsf2bp (ENSRNOG00000001193)	Rrp1b (ENSRNOG00000001194) ##21	RGD1566085 (ENSRNOG00000068407) #19	Pdxk (ENSRNOG00000049937) #19	Cstb (ENSRNOG00000001201) #20	Rrp1 (ENSRNOG00000001203) #21	Gm56820 (ENSRNOG00000062695)	Agpat3 (ENSRNOG00000001205) #22	Trappc10 (ENSRNOG00000023210) #23	Pwp2 (ENSRNOG00000001210) #24	Gatd3a (ENSRNOG00000001211) #25	Icoslg (ENSRNOG00000023109) #26	Dnmt3l (ENSRNOG00000001212) #27	Aire (ENSRNOG00000001213) #28	Pfkl (ENSRNOG00000001214) #29	Cfap410 (ENSRNOG00000001215) #30	Trpm2 (ENSRNOG00000001216) #31	Lrrc3 (ENSRNOG00000001217) #32	Tspear (ENSRNOG00000001219) #18	LOC100365646 (ENSRNOG00000001218) #15	LOC120098854 (ENSRNOG00000067436) #15	LOC120098855 (ENSRNOG00000042329) #15	LOC690415 (ENSRNOG00000069553) #15
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989.t	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183.e.a.b #15	ENSGT00940000161526.b	ENSGT00940000155183.f #15	ENSGT00940000158193 #11
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989.t	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j ##10	ENSGT00390000004977 #9	ENSGT01090000259987.a.a.a.c #8
Prairie vole	MODERN SPECIES	352	Rsph1 (ENSMOCG00000003255)	Slc37a1 (ENSMOCG00000013618)	Pde9a (ENSMOCG00000012568)	Wdr4 (ENSMOCG00000022127)	ENSMOCG00000021683	Pknox1 (ENSMOCG00000000944)	Cbs (ENSMOCG00000010781)	U2af1 (ENSMOCG00000003736)	Cryaa (ENSMOCG00000001790)	Sik1 (ENSMOCG00000000510)	Hsf2bp (ENSMOCG00000006152)	Rrp1b (ENSMOCG00000001117) ##21	Pdxk (ENSMOCG00000006016) #19	Cstb (ENSMOCG00000022035) #20	Rrp1 (ENSMOCG00000015687) #21	ENSMOCG00000010991 #22	Trappc10 (ENSMOCG00000006082) #23	Pwp2 (ENSMOCG00000003844) #24	Gatd3a (ENSMOCG00000019921) #25	Icosl (ENSMOCG00000018242) #26	Dnmt3l (ENSMOCG00000022517) #27	Aire (ENSMOCG00000008071) #28	ENSMOCG00000013045 #29	Cfap410 (ENSMOCG00000020426) #30	Trpm2 (ENSMOCG00000019856) #31	Lrrc3 (ENSMOCG00000017485) #32	ENSMOCG00000016139 #15	ENSMOCG00000015079 #15	ENSMOCG00000014262 #15	ENSMOCG00000013216 #15	ENSMOCG00000004341
Northern American deer mouse	MODERN SPECIES	13	Pde9a (ENSPEMG00000023664)	Wdr4 (ENSPEMG00000022550)	Ndufv3 (ENSPEMG00000022595)	Pknox1 (ENSPEMG00000021492)	Cbs (ENSPEMG00000021739)	U2af1 (ENSPEMG00000021041)	ENSPEMG00000027416	Cryaa (ENSPEMG00000021591)	Sik1 (ENSPEMG00000024129)	Hsf2bp (ENSPEMG00000021638)	Rrp1b (ENSPEMG00000022490) ##21	ENSPEMG00000023225 #19	ENSPEMG00000030967 #19	Cstb (ENSPEMG00000025261) #20	Rrp1 (ENSPEMG00000018421) #21	Agpat3 (ENSPEMG00000016159) #22	Trappc10 (ENSPEMG00000023811) #23	Pwp2 (ENSPEMG00000009968) #24	Gatd3a (ENSPEMG00000023416) #25	ENSPEMG00000007525 #26	Dnmt3l (ENSPEMG00000009203) #27	Aire (ENSPEMG00000022217) #28	Pfkl (ENSPEMG00000022772) #29	Cfap410 (ENSPEMG00000022711) #30	Trpm2 (ENSPEMG00000012456) #31	Lrrc3 (ENSPEMG00000030505) #32	Tspear (ENSPEMG00000016261) #18	ENSPEMG00000023368 #15	ENSPEMG00000021662 #15	ENSPEMG00000029694 #15	ENSPEMG00000026871 #15
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989.t	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000155183.e.a.b.a.b #15	ENSGT00940000161526.b	ENSGT00940000155183.f #15	ENSGT00940000155183.e.a.b.a.a #15
Golden Hamster	MODERN SPECIES	641	Tmprss3 (ENSMAUG00000020969)	Ubash3a (ENSMAUG00000019578)	Rsph1 (ENSMAUG00000014285)	Slc37a1 (ENSMAUG00000021076)	Pde9a (ENSMAUG00000001943)	Wdr4 (ENSMAUG00000020696)	Ndufv3 (ENSMAUG00000020188)	Pknox1 (ENSMAUG00000015669)	Cbs (ENSMAUG00000020960)	U2af1 (ENSMAUG00000020528)	Cryaa (ENSMAUG00000017095)	Sik1 (ENSMAUG00000018473)	Hsf2bp (ENSMAUG00000018607)	Rrp1b (ENSMAUG00000021508) ##21	Rrp1 (ENSMAUG00000017653) #21	Agpat3 (ENSMAUG00000019017) #22	Trappc10 (ENSMAUG00000021971) #23	Pwp2 (ENSMAUG00000020265) #24	Icosl (ENSMAUG00000019140) #26	Dnmt3l (ENSMAUG00000019680) #27	Aire (ENSMAUG00000021943) #28	Pfkl (ENSMAUG00000017741) #29	Cfap410 (ENSMAUG00000018378) #30	Trpm2 (ENSMAUG00000005011) #31	Lrrc3 (ENSMAUG00000021907) #32	Tspear (ENSMAUG00000011883) #18	ENSMAUG00000012939 #15	ENSMAUG00000007884	ENSMAUG00000021981	ENSMAUG00000002462	ENSMAUG00000021040 #15
Chinese hamster chok1gshd	MODERN SPECIES	204							ENSCGRG00001003985	ENSCGRG00001010889 ##21	ENSCGRG00001019133 #19	ENSCGRG00001016759 #19	ENSCGRG00001005047 #19	ENSCGRG00001023882 ##21	ENSCGRG00001021534	Cstb (ENSCGRG00001023703) #20	Rrp1 (ENSCGRG00001011920) #21	Agpat3 (ENSCGRG00001023999) #22	Trappc10 (ENSCGRG00001019791) #23	Pwp2 (ENSCGRG00001020074) #24	Gatd3a (ENSCGRG00001019921) #25	Icosl (ENSCGRG00001009599) #26	Dnmt3l (ENSCGRG00001016841) #27	Aire (ENSCGRG00001021441) #28	Pfkl (ENSCGRG00001015753) #29	Cfap410 (ENSCGRG00001007084) #30	Trpm2 (ENSCGRG00001014379) #31	Lrrc3 (ENSCGRG00001011603) #32	Tspear (ENSCGRG00001017931) #18	ENSCGRG00001013139 #15	ENSCGRG00001017382 #15	Gm36176 (ENSCGRG00001022992) #15	ENSCGRG00001000038 #15
Upper Galilee mountains blind mole rat	MODERN SPECIES	557	Rsph1 (ENSNGAG00000005022)	Slc37a1 (ENSNGAG00000022440)	Pde9a (ENSNGAG00000014370)	Wdr4 (ENSNGAG00000017117)	Ndufv3 (ENSNGAG00000011220)	Pknox1 (ENSNGAG00000015912)	Cbs (ENSNGAG00000011354)	U2af1 (ENSNGAG00000021641)	Cryaa (ENSNGAG00000024156)	Sik1 (ENSNGAG00000015397)	Hsf2bp (ENSNGAG00000002647)	Rrp1b (ENSNGAG00000021073) ##21	Pdxk (ENSNGAG00000011007) #19	Cstb (ENSNGAG00000001985) #20	ENSNGAG00000022344 #21	Agpat3 (ENSNGAG00000023781) #22	ENSNGAG00000020131 #23	Pwp2 (ENSNGAG00000021106) #24	Gatd3a (ENSNGAG00000023649) #25	ENSNGAG00000007536 #26	Dnmt3l (ENSNGAG00000004497) #27	Aire (ENSNGAG00000006411) #28	Pfkl (ENSNGAG00000023632) #29	Cfap410 (ENSNGAG00000008743) #30	Trpm2 (ENSNGAG00000015763) #31	Lrrc3 (ENSNGAG00000024059) #32	Tspear (ENSNGAG00000022570) #18	ENSNGAG00000012871 #15	ENSNGAG00000023342 #15	ENSNGAG00000000805 #15
Lesser Egyptian jerboa	MODERN SPECIES	54	Slc37a1 (ENSJJAG00000009176)	Pde9a (ENSJJAG00000022814)	Wdr4 (ENSJJAG00000016232)	ENSJJAG00000012928	ENSJJAG00000022210	Pknox1 (ENSJJAG00000003326)	Cbs (ENSJJAG00000019675)	U2af1 (ENSJJAG00000000485)	Cryaa (ENSJJAG00000008890)	Sik1 (ENSJJAG00000021978)	Hsf2bp (ENSJJAG00000011558)	Rrp1b (ENSJJAG00000021279) ##21	Pdxk (ENSJJAG00000016609) #19	ENSJJAG00000019836 #20	Rrp1 (ENSJJAG00000018886) #21	Agpat3 (ENSJJAG00000019770) #22	Lbh (ENSJJAG00000023694)	Lclat1 (ENSJJAG00000015441) ##22	Capn13 (ENSJJAG00000015680)	Galnt14 (ENSJJAG00000020390)	Ehd3 (ENSJJAG00000013415)	Xdh (ENSJJAG00000017980)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00950000182836.b.b.b.a #22
Pika	MODERN SPECIES	2592																AGPAT3 (ENSOPRG00000013786) #22
Tree shrew	MODERN SPECIES	8189																AGPAT3 (ENSTBEG00000011207) #22
Primates	ANCESTRAL SPECIES	1	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579	ENSGT00940000163845	ENSGT00940000163258 #14	ENSGT00940000158193 #11
Haplorrhini	ANCESTRAL SPECIES	22	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000163258.j #14	ENSGT00940000164049	ENSGT00940000163527	ENSGT00940000158579
Simiiformes	ANCESTRAL SPECIES	1	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.b.a	ENSGT00940000163258.j #14	ENSGT00940000158579.l.b.b.b	ENSGT00940000163258.i.b #14
Platyrrhini	ANCESTRAL SPECIES	31	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.qb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT01020000234487	ENSGT00390000003873.v #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000158579.k	ENSGT00940000158579.l.a	ENSGT00940000163258.i.b #14
Mas night monkey	DUPLICATION
Mas night monkey	MODERN SPECIES	417																ENSANAG00000031608 #22	ENSANAG00000019650	NPAS2 (ENSANAG00000029045)	ENSANAG00000023888	TBC1D8 (ENSANAG00000003815)	ENSANAG00000031938	CNOT11 (ENSANAG00000028092)	RNF149 (ENSANAG00000031925)	CREG2 (ENSANAG00000036025)
Mas night monkey	MODERN SPECIES	1376	SLC37A1 (ENSANAG00000028307)	PDE9A (ENSANAG00000037833)	WDR4 (ENSANAG00000026274)	NDUFV3 (ENSANAG00000026013)	PKNOX1 (ENSANAG00000022045)	CBS (ENSANAG00000032848)	ENSANAG00000026034	CRYAA (ENSANAG00000021687)	SIK1 (ENSANAG00000038083)	HSF2BP (ENSANAG00000037216)	RRP1B (ENSANAG00000034889) ##21	ENSANAG00000033810	PDXK (ENSANAG00000019464) #19	ENSANAG00000038089 #20	RRP1 (ENSANAG00000037815) #21	ENSANAG00000036034 #22	ENSANAG00000035921	TRAPPC10 (ENSANAG00000032975) #23	PWP2 (ENSANAG00000034845) #24	GATD3 (ENSANAG00000032510) #25	ENSANAG00000031721 #26	DNMT3L (ENSANAG00000027897) #27	AIRE (ENSANAG00000031045) #28	PFKL (ENSANAG00000022126) #29	CFAP410 (ENSANAG00000021390) #30	TRPM2 (ENSANAG00000034661) #31	TSPEAR (ENSANAG00000032724) #18	ENSANAG00000032475	ENSANAG00000028487	ENSANAG00000027667	ENSANAG00000027010
Cebidae	ANCESTRAL SPECIES	32	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.qb #20	ENSGT00860000135708	ENSGT00940000154826.pb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT01020000234487	ENSGT00390000003873.v #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000158579.k	ENSGT00940000158579.l.a	ENSGT00940000163258.i.b #14	ENSGT00940000163845.c
Cebidae_a	ANCESTRAL SPECIES	29	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196.m	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.qb #20	ENSGT00860000135708	ENSGT00940000154826.pb #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000016927.z	ENSGT00390000003873.v #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000158579.k	ENSGT00940000158579.l.a	ENSGT00940000163258.i.b #14	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.b
Bolivian squirrel monkey	MODERN SPECIES	66	PDE9A (ENSSBOG00000027099)	WDR4 (ENSSBOG00000026351)	NDUFV3 (ENSSBOG00000019466)	ENSSBOG00000004329	PKNOX1 (ENSSBOG00000018950)	CBS (ENSSBOG00000022215)	U2AF1 (ENSSBOG00000027084)	CRYAA (ENSSBOG00000026135)	SIK1 (ENSSBOG00000033825)	HSF2BP (ENSSBOG00000031228)	RRP1B (ENSSBOG00000034727) ##21	ENSSBOG00000033475	PDXK (ENSSBOG00000023925) #19	ENSSBOG00000021578 #20	RRP1 (ENSSBOG00000034689) #21	AGPAT3 (ENSSBOG00000026342) #22	TRAPPC10 (ENSSBOG00000018376) #23	PWP2 (ENSSBOG00000034554) #24	GATD3 (ENSSBOG00000033759) #25	ICOSLG (ENSSBOG00000031169) #26	DNMT3L (ENSSBOG00000030998) #27	AIRE (ENSSBOG00000027491) #28	PFKL (ENSSBOG00000024155) #29	CFAP410 (ENSSBOG00000022331) #30	TRPM2 (ENSSBOG00000023964) #31	ENSSBOG00000030908	ENSSBOG00000029917	ENSSBOG00000025216	ENSSBOG00000027330	ENSSBOG00000034072	ENSSBOG00000033182
Capuchin	MODERN SPECIES	112	ENSCCAG00000033172	PDE9A (ENSCCAG00000001044)	WDR4 (ENSCCAG00000022755)	ENSCCAG00000022392	PKNOX1 (ENSCCAG00000022902)	CBS (ENSCCAG00000032722)	U2AF1 (ENSCCAG00000036938)	CRYAA (ENSCCAG00000030217)	SIK1 (ENSCCAG00000028295)	HSF2BP (ENSCCAG00000031814)	RRP1B (ENSCCAG00000029384) ##21	ENSCCAG00000001912	PDXK (ENSCCAG00000035149) #19	ENSCCAG00000030098 #20	RRP1 (ENSCCAG00000029828) #21	AGPAT3 (ENSCCAG00000035106) #22	ENSCCAG00000022399	TRAPPC10 (ENSCCAG00000028731) #23	PWP2 (ENSCCAG00000034616) #24	GATD3 (ENSCCAG00000023616) #25	ICOSLG (ENSCCAG00000034711) #26	DNMT3L (ENSCCAG00000028251) #27	AIRE (ENSCCAG00000033062) #28	PFKL (ENSCCAG00000023028) #29	CFAP410 (ENSCCAG00000019718) #30	TRPM2 (ENSCCAG00000035480) #31	ENSCCAG00000022693	ENSCCAG00000031995	ENSCCAG00000012157	ENSCCAG00000027045	ENSCCAG00000032996
Marmoset	MODERN SPECIES	13	RSPH1 (ENSCJAG00000005333)	SLC37A1 (ENSCJAG00000005291)	PDE9A (ENSCJAG00000085834)	WDR4 (ENSCJAG00000015778)	NDUFV3 (ENSCJAG00000015786)	PKNOX1 (ENSCJAG00000040086)	CBS (ENSCJAG00000015824)	U2AF1 (ENSCJAG00000015843)	CRYAA (ENSCJAG00000070733)	SIK1 (ENSCJAG00000015879)	HSF2BP (ENSCJAG00000059885)	RRP1B (ENSCJAG00000017077) ##21	ENSCJAG00000043205 #19	ENSCJAG00000071745 #20	ENSCJAG00000052744	AGPAT3 (ENSCJAG00000086643) #22	ENSCJAG00000080531	TRAPPC10 (ENSCJAG00000005608) #23	PWP2 (ENSCJAG00000005570) #24	GATD3 (ENSCJAG00000005560) #25	ICOSLG (ENSCJAG00000003576) #26	DNMT3L (ENSCJAG00000087076) #27	AIRE (ENSCJAG00000013748) #28	PFKL (ENSCJAG00000017630) #29	CFAP410 (ENSCJAG00000017611) #30	TRPM2 (ENSCJAG00000073600) #31	LRRC3 (ENSCJAG00000081918) #32	TSPEAR (ENSCJAG00000015329) #18	ENSCJAG00000046358	KRTAP10-3 (ENSCJAG00000077838)	ENSCJAG00000041374
Catarrhini	ANCESTRAL SPECIES	25	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.b.a	ENSGT00940000163258.j #14
Cercopithecidae	ANCESTRAL SPECIES	28	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.nb #20	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.f
Rhinopithecus	ANCESTRAL SPECIES	270									ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00910000147958	ENSGT00860000135708	ENSGT00390000003874 #19	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.f
Black snub-nosed monkey	MODERN SPECIES	924									HSF2BP (ENSRBIG00000038854)	RRP1B (ENSRBIG00000041689) ##21	ENSRBIG00000028564	ENSRBIG00000024778	PDXK (ENSRBIG00000022396) #19	ENSRBIG00000032395 #20	RRP1 (ENSRBIG00000032082) #21	AGPAT3 (ENSRBIG00000029812) #22	TRAPPC10 (ENSRBIG00000029157) #23	PWP2 (ENSRBIG00000034365) #24	GATD3 (ENSRBIG00000040907) #25	ICOSLG (ENSRBIG00000042775) #26	DNMT3L (ENSRBIG00000029101) #27	AIRE (ENSRBIG00000034675) #28	PFKL (ENSRBIG00000024591) #29	CFAP410 (ENSRBIG00000036434) #30	TRPM2 (ENSRBIG00000042457) #31	LRRC3 (ENSRBIG00000013619) #32	ENSRBIG00000013411	KRTAP10-2 (ENSRBIG00000029279) #14	ENSRBIG00000039496	ENSRBIG00000029901	ENSRBIG00000040008
Golden snub-nosed monkey	MODERN SPECIES	1362									HSF2BP (ENSRROG00000032823)	RRP1B (ENSRROG00000031499) ##21	PDXK (ENSRROG00000044416) #19	ENSRROG00000030459	ENSRROG00000042411	CSTB (ENSRROG00000038574) #20	RRP1 (ENSRROG00000039799) #21	AGPAT3 (ENSRROG00000031040) #22	ENSRROG00000032758	TRAPPC10 (ENSRROG00000043895) #23	PWP2 (ENSRROG00000031946) #24	GATD3 (ENSRROG00000034542) #25
Cercopithecinae	ANCESTRAL SPECIES	23	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.nb.a.b #20	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158193 #11	ENSGT00950000182895.a.b.j.b ##10
Cercopithecinae_a	ANCESTRAL SPECIES	22	ENSGT00390000012196	ENSGT01000000215029.c	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00910000147350	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.a	ENSGT00940000163845.c
Macaca	ANCESTRAL SPECIES	3	ENSGT01000000215029.c	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00910000147350	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.ob #20	ENSGT00860000135708	ENSGT00940000154826.nb.b #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000158579.l.a	ENSGT00940000158579.l.b.b.a.e	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.a	ENSGT00940000163845.c
Pig-tailed macaque	MODERN SPECIES	503	WDR4 (ENSMNEG00000033682)	NDUFV3 (ENSMNEG00000031842)	ERVH48-1 (ENSMNEG00000016913)	PKNOX1 (ENSMNEG00000035609)	CBS (ENSMNEG00000039488)	U2AF1 (ENSMNEG00000030283)	CRYAA (ENSMNEG00000005656)	SIK1 (ENSMNEG00000033778)	ENSMNEG00000025872	HSF2BP (ENSMNEG00000038532)	RRP1B (ENSMNEG00000034269) ##21	ENSMNEG00000041372	PDXK (ENSMNEG00000045284) #19	CSTB (ENSMNEG00000029992) #20	RRP1 (ENSMNEG00000031210) #21	AGPAT3 (ENSMNEG00000033756) #22	TRAPPC10 (ENSMNEG00000033526) #23	PWP2 (ENSMNEG00000030782) #24	GATD3 (ENSMNEG00000038785) #25	ICOSLG (ENSMNEG00000029638) #26	DNMT3L (ENSMNEG00000042190) #27	AIRE (ENSMNEG00000011508) #28	PFKL (ENSMNEG00000032421) #29	CFAP410 (ENSMNEG00000034463) #30	TRPM2 (ENSMNEG00000027827) #31	LRRC3 (ENSMNEG00000021603) #32	ENSMNEG00000040527	ENSMNEG00000033060	ENSMNEG00000030729	ENSMNEG00000036953	ENSMNEG00000037098
Macaca_a	ANCESTRAL SPECIES	22	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029.c	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00910000147350	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00940000163845.d	ENSGT00940000158579.l.b.b.a.e	ENSGT00940000158579.l.b.a	ENSGT00940000163258.i.b #14	ENSGT00940000164049.b.a
Rhesus	MODERN SPECIES	13	SLC37A1 (ENSMMUG00000018085)	PDE9A (ENSMMUG00000022107)	WDR4 (ENSMMUG00000062729)	NDUFV3 (ENSMMUG00000001553)	ENSMMUG00000044879	PKNOX1 (ENSMMUG00000009288)	CBS (ENSMMUG00000009289)	U2AF1 (ENSMMUG00000022769)	CRYAA (ENSMMUG00000020271)	SIK1 (ENSMMUG00000020050)	HSF2BP (ENSMMUG00000022791)	RRP1B (ENSMMUG00000000104) ##21	PDXK (ENSMMUG00000062457) #19	CSTB (ENSMMUG00000012303) #20	RRP1 (ENSMMUG00000012304) #21	AGPAT3 (ENSMMUG00000045179) #22	TRAPPC10 (ENSMMUG00000005269) #23	PWP2 (ENSMMUG00000005271) #24	GATD3 (ENSMMUG00000005272) #25	ICOSLG (ENSMMUG00000010647) #26	DNMT3L (ENSMMUG00000010648) #27	AIRE (ENSMMUG00000004168) #28	PFKL (ENSMMUG00000004173) #29	CFAP410 (ENSMMUG00000049578) #30	TRPM2 (ENSMMUG00000004175) #31	LRRC3 (ENSMMUG00000049755) #32	KRTAP10-10 (ENSMMUG00000022559)	ENSMMUG00000022558	ENSMMUG00000030497	KRTAP10-8 (ENSMMUG00000048049) #14	KRTAP10-9 (ENSMMUG00000043221)
Crab-eating macaque	MODERN SPECIES	13	ENSMFAG00000051957	PKNOX1 (ENSMFAG00000039213)	ENSMFAG00000063594	CBS (ENSMFAG00000038794)	ENSMFAG00000032317	CRYAA (ENSMFAG00000036551)	SIK1 (ENSMFAG00000032324)	ENSMFAG00000063691	HSF2BP (ENSMFAG00000041607)	RRP1B (ENSMFAG00000039152) ##21	ENSMFAG00000056006	PDXK (ENSMFAG00000042485) #19	CSTB (ENSMFAG00000061351) #20	RRP1 (ENSMFAG00000003202) #21	ENSMFAG00000057571	ENSMFAG00000053688 #22	TRAPPC10 (ENSMFAG00000041704) #23	PWP2 (ENSMFAG00000044448) #24	GATD3 (ENSMFAG00000046334) #25	ICOSLG (ENSMFAG00000040533) #26	DNMT3L (ENSMFAG00000046145) #27	AIRE (ENSMFAG00000001488) #28	PFKL (ENSMFAG00000037062) #29	CFAP410 (ENSMFAG00000049270) #30	TRPM2 (ENSMFAG00000001773) #31	LRRC3 (ENSMFAG00000028969) #32	KRTAP10-4 (ENSMFAG00000031679)	KRTAP10-9 (ENSMFAG00000053657)	KRTAP10-7 (ENSMFAG00000051280)	TSPEAR (ENSMFAG00000001348) #18	UBE2G2 (ENSMFAG00000057431) #11
Cercopithecinae_b	ANCESTRAL SPECIES	29	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029.c	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00910000147350	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.a	ENSGT00940000158579.l.b.a
Cercopithecinae_d	ANCESTRAL SPECIES	36	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029.c	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a.ge	ENSGT00940000160159	ENSGT00940000154989	ENSGT00910000147350	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826.ob #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.a	ENSGT00940000158579.l.b.b.a.f
Drill	MODERN SPECIES	1420	WDR4 (ENSMLEG00000042177)	NDUFV3 (ENSMLEG00000042871)	ERVH48-1 (ENSMLEG00000001600)	PKNOX1 (ENSMLEG00000037117)	CBS (ENSMLEG00000041980)	ENSMLEG00000029446	CRYAA (ENSMLEG00000039416)	SIK1 (ENSMLEG00000030826)	ENSMLEG00000034490	HSF2BP (ENSMLEG00000042323)	RRP1B (ENSMLEG00000040044) ##21	ENSMLEG00000002822	PDXK (ENSMLEG00000015398) #19	ENSMLEG00000031224 #20	RRP1 (ENSMLEG00000037797) #21	AGPAT3 (ENSMLEG00000033816) #22	ENSMLEG00000026219	TRAPPC10 (ENSMLEG00000027219) #23	PWP2 (ENSMLEG00000039860) #24	GATD3 (ENSMLEG00000027477) #25	ICOSLG (ENSMLEG00000043829) #26	DNMT3L (ENSMLEG00000041399) #27	AIRE (ENSMLEG00000026732) #28	PFKL (ENSMLEG00000030281) #29	CFAP410 (ENSMLEG00000038505) #30	TRPM2 (ENSMLEG00000009280) #31	LRRC3 (ENSMLEG00000001984) #32	ENSMLEG00000040298	ENSMLEG00000031061 #14	TSPEAR (ENSMLEG00000035979) #18	ENSMLEG00000034784
Sooty mangabey	MODERN SPECIES	465	PDE9A (ENSCATG00000039788)	WDR4 (ENSCATG00000042955)	NDUFV3 (ENSCATG00000043099)	ERVH48-1 (ENSCATG00000032142)	PKNOX1 (ENSCATG00000033829)	CBS (ENSCATG00000037956)	ENSCATG00000044934	CRYAA (ENSCATG00000044220)	SIK1 (ENSCATG00000037666)	ENSCATG00000015361	HSF2BP (ENSCATG00000041814)	RRP1B (ENSCATG00000017423) ##21	PDXK (ENSCATG00000037302) #19	ENSCATG00000042137 #20	RRP1 (ENSCATG00000015632) #21	AGPAT3 (ENSCATG00000027955) #22	ENSCATG00000034946	TRAPPC10 (ENSCATG00000014984) #23	ENSCATG00000037979	PWP2 (ENSCATG00000032550) #24	GATD3 (ENSCATG00000021742) #25	ICOSLG (ENSCATG00000023031) #26	DNMT3L (ENSCATG00000034363) #27	AIRE (ENSCATG00000034405) #28	PFKL (ENSCATG00000038502) #29	CFAP410 (ENSCATG00000040484) #30	TRPM2 (ENSCATG00000034197) #31	LRRC3 (ENSCATG00000017064) #32	TSPEAR (ENSCATG00000034984) #18	ENSCATG00000041458 #14	ENSCATG00000041080
Vervet Monkey	MODERN SPECIES	11	SLC37A1 (ENSCSAG00000008088)	ENSCSAG00000008076	PDE9A (ENSCSAG00000008068)	WDR4 (ENSCSAG00000008058)	NDUFV3 (ENSCSAG00000008049)	PKNOX1 (ENSCSAG00000008042)	CBS (ENSCSAG00000008036)	U2AF1 (ENSCSAG00000008019)	CRYAA (ENSCSAG00000007988)	SIK1 (ENSCSAG00000007979)	HSF2BP (ENSCSAG00000007970)	RRP1B (ENSCSAG00000007961) ##21	PDXK (ENSCSAG00000007949) #19	ENSCSAG00000007941 #20	RRP1 (ENSCSAG00000007936) #21	AGPAT3 (ENSCSAG00000007926) #22	TRAPPC10 (ENSCSAG00000007920) #23	PWP2 (ENSCSAG00000007903) #24	GATD3 (ENSCSAG00000007892) #25	ENSCSAG00000007887	ICOSLG (ENSCSAG00000007876) #26	DNMT3L (ENSCSAG00000007863) #27	AIRE (ENSCSAG00000007836) #28	PFKL (ENSCSAG00000007817) #29	CFAP410 (ENSCSAG00000007805) #30	TRPM2 (ENSCSAG00000007727) #31	LRRC3 (ENSCSAG00000000277) #32	TSPEAR (ENSCSAG00000007591) #18	ENSCSAG00000007568	KRTAP10-3 (ENSCSAG00000007561)	KRTAP10-4 (ENSCSAG00000007551)
Hominoidea	ANCESTRAL SPECIES	26	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00860000135708	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000163258.j #14	ENSGT00940000158579.l.b.b.b
Hominidae	ANCESTRAL SPECIES	25	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000167184	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.b.a.d	ENSGT00940000163258.j #14
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	27	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000167184	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00910000147401	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.b.b.a.d	ENSGT00940000163258.j #14
Gorilla	MODERN SPECIES	12	SLC37A1 (ENSGGOG00000012067)	PDE9A (ENSGGOG00000014263)	WDR4 (ENSGGOG00000016652)	NDUFV3 (ENSGGOG00000014547)	ERVH48-1 (ENSGGOG00000037204)	PKNOX1 (ENSGGOG00000013783)	CBS (ENSGGOG00000010251)	ENSGGOG00000038883	CRYAA (ENSGGOG00000010345)	SIK1 (ENSGGOG00000007792)	HSF2BP (ENSGGOG00000012059)	RRP1B (ENSGGOG00000012069) ##21	PDXK (ENSGGOG00000003904) #19	CSTB (ENSGGOG00000024406) #20	RRP1 (ENSGGOG00000000173) #21	AGPAT3 (ENSGGOG00000043336) #22	ENSGGOG00000044032	TRAPPC10 (ENSGGOG00000010716) #23	PWP2 (ENSGGOG00000041875) #24	GATD3 (ENSGGOG00000041897) #25	ENSGGOG00000012425 #26	DNMT3L (ENSGGOG00000012431) #27	AIRE (ENSGGOG00000005672) #28	PFKL (ENSGGOG00000005687) #29	ENSGGOG00000005702 #30	TRPM2 (ENSGGOG00000008410) #31	LRRC3 (ENSGGOG00000008435) #32	TSPEAR (ENSGGOG00000002047) #18	ENSGGOG00000039833	ENSGGOG00000040198 #14	KRTAP10-7 (ENSGGOG00000044027)
Homo/Pan group	ANCESTRAL SPECIES	26	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000167184	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT01020000234487	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.a	ENSGT00940000158579.l.b.b.a.c	ENSGT00940000164049.b.b
Pan	ANCESTRAL SPECIES	27	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT01000000215029	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000167184	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00900000140979.a.a.`b.a.o.a	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18	ENSGT00940000158579.l.a	ENSGT00940000163845.c	ENSGT00940000158579.l.b.b.a.c
Chimpanzee	MODERN SPECIES	12	PDE9A (ENSPTRG00000013946)	WDR4 (ENSPTRG00000013948)	NDUFV3 (ENSPTRG00000047245)	ERVH48-1 (ENSPTRG00000051369)	PKNOX1 (ENSPTRG00000013950)	CBS (ENSPTRG00000013951)	ENSPTRG00000013952	ENSPTRG00000044914	CRYAA (ENSPTRG00000013953)	SIK1 (ENSPTRG00000013954)	HSF2BP (ENSPTRG00000013957)	RRP1B (ENSPTRG00000013958) ##21	PDXK (ENSPTRG00000040962) #19	CSTB (ENSPTRG00000048077) #20	RRP1 (ENSPTRG00000013962) #21	AGPAT3 (ENSPTRG00000042805) #22	TRAPPC10 (ENSPTRG00000013968) #23	ENSPTRG00000048335	PWP2 (ENSPTRG00000013969) #24	GATD3 (ENSPTRG00000047816) #25	ENSPTRG00000013972 #26	DNMT3L (ENSPTRG00000013973) #27	AIRE (ENSPTRG00000013974) #28	PFKL (ENSPTRG00000022972) #29	CFAP410 (ENSPTRG00000013976) #30	TRPM2 (ENSPTRG00000013977) #31	LRRC3 (ENSPTRG00000013978) #32	TSPEAR (ENSPTRG00000013980) #18	KRTAP10-2 (ENSPTRG00000013982) #14	ENSPTRG00000046656	KRTAP10-5 (ENSPTRG00000031415)
Bonobo	MODERN SPECIES	12	PDE9A (ENSPPAG00000027576)	WDR4 (ENSPPAG00000038150)	NDUFV3 (ENSPPAG00000016184)	ERVH48-1 (ENSPPAG00000006329)	PKNOX1 (ENSPPAG00000027586)	CBS (ENSPPAG00000042865)	U2AF1 (ENSPPAG00000000845)	ENSPPAG00000026875	CRYAA (ENSPPAG00000034607)	SIK1 (ENSPPAG00000034814)	HSF2BP (ENSPPAG00000034999)	RRP1B (ENSPPAG00000035319) ##21	PDXK (ENSPPAG00000020347) #19	ENSPPAG00000028631 #20	RRP1 (ENSPPAG00000029050) #21	AGPAT3 (ENSPPAG00000029344) #22	TRAPPC10 (ENSPPAG00000030751) #23	ENSPPAG00000035184	PWP2 (ENSPPAG00000037874) #24	GATD3 (ENSPPAG00000030535) #25	ENSPPAG00000036658 #26	DNMT3L (ENSPPAG00000041935) #27	AIRE (ENSPPAG00000018145) #28	PFKL (ENSPPAG00000028154) #29	ENSPPAG00000033399 #30	TRPM2 (ENSPPAG00000036474) #31	LRRC3 (ENSPPAG00000006087) #32	TSPEAR (ENSPPAG00000027981) #18	ENSPPAG00000029414	ENSPPAG00000029990	ENSPPAG00000030230
Human	MODERN SPECIES	13	PDE9A (ENSG00000160191)	WDR4 (ENSG00000160193)	NDUFV3 (ENSG00000160194)	ERVH48-1 (ENSG00000233056)	PKNOX1 (ENSG00000160199)	CBS (ENSG00000160200)	U2AF1 (ENSG00000160201)	CRYAA (ENSG00000160202)	SIK1 (ENSG00000142178)	HSF2BP (ENSG00000160207)	H2BC12L (ENSG00000234289)	RRP1B (ENSG00000160208) ##21	PDXK (ENSG00000160209) #19	CSTB (ENSG00000160213) #20	RRP1 (ENSG00000160214) #21	AGPAT3 (ENSG00000160216) #22	ENSG00000288593	TRAPPC10 (ENSG00000160218) #23	PWP2 (ENSG00000241945) #24	GATD3 (ENSG00000160221) #25	ICOSLG (ENSG00000160223) #26	DNMT3L (ENSG00000142182) #27	AIRE (ENSG00000160224) #28	PFKL (ENSG00000141959) #29	CFAP410 (ENSG00000160226) #30	TRPM2 (ENSG00000142185) #31	LRRC3 (ENSG00000160233) #32	TSPEAR (ENSG00000175894) #18	KRTAP10-1 (ENSG00000215455)	KRTAP10-2 (ENSG00000205445) #14	KRTAP10-3 (ENSG00000212935)
Orangutan	MODERN SPECIES	12	NDUFV3 (ENSPPYG00000011459)	ERVH48-1 (ENSPPYG00000032563)	PKNOX1 (ENSPPYG00000011461)	ENSPPYG00000041500	CBS (ENSPPYG00000011462)	U2AF1 (ENSPPYG00000011463)	ENSPPYG00000040498	ENSPPYG00000011465	SIK1 (ENSPPYG00000011466)	ENSPPYG00000011469	RRP1B (ENSPPYG00000011470) ##21	PDXK (ENSPPYG00000019998) #19	CSTB (ENSPPYG00000036267) #20	RRP1 (ENSPPYG00000011474) #21	ENSPPYG00000034644	AGPAT3 (ENSPPYG00000011476) #22	ENSPPYG00000036566	TRAPPC10 (ENSPPYG00000011477) #23	PWP2 (ENSPPYG00000011478) #24	ENSPPYG00000011479 #25	ICOSLG (ENSPPYG00000011481) #26	DNMT3L (ENSPPYG00000035139) #27	AIRE (ENSPPYG00000011482) #28	PFKL (ENSPPYG00000011483) #29	ENSPPYG00000041331 #30	TRPM2 (ENSPPYG00000011485) #31	LRRC3 (ENSPPYG00000011486) #32	TSPEAR (ENSPPYG00000011488) #18	KRTAP10-3 (ENSPPYG00000037806)	ENSPPYG00000039780	KRTAP10-5 (ENSPPYG00000011492)
Gibbon	MODERN SPECIES	17	NDUFV3 (ENSNLEG00000014663)	ERVH48-1 (ENSNLEG00000027799)	PKNOX1 (ENSNLEG00000014675)	CBS (ENSNLEG00000029685)	U2AF1 (ENSNLEG00000030710)	ENSNLEG00000033479	CRYAA (ENSNLEG00000014752)	SIK1 (ENSNLEG00000001409)	HSF2BP (ENSNLEG00000034577)	RRP1B (ENSNLEG00000001490) ##21	PDXK (ENSNLEG00000001565) #19	ENSNLEG00000028797	ENSNLEG00000001583 #20	RRP1 (ENSNLEG00000034734) #21	ENSNLEG00000033631	AGPAT3 (ENSNLEG00000001755) #22	TRAPPC10 (ENSNLEG00000001820) #23	ENSNLEG00000029247	PWP2 (ENSNLEG00000001928) #24	GATD3 (ENSNLEG00000033634) #25	ENSNLEG00000033148 #26	DNMT3L (ENSNLEG00000002093) #27	ENSNLEG00000027646 #28	PFKL (ENSNLEG00000002171) #29	ENSNLEG00000002219 #30	ENSNLEG00000002224 #31	TSPEAR (ENSNLEG00000002263) #18	KRTAP10-2 (ENSNLEG00000027209) #14	KRTAP10-3 (ENSNLEG00000026713)	ENSNLEG00000027551	KRTAP10-5 (ENSNLEG00000026989)
Tarsier	MODERN SPECIES	4156																AGPAT3 (ENSTSYG00000013680) #22	TRAPPC10 (ENSTSYG00000009018) #23	PWP2 (ENSTSYG00000009022) #24	GATD3 (ENSTSYG00000013874) #25
Strepsirrhini	ANCESTRAL SPECIES	1	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000164049	ENSGT00940000163527	ENSGT00940000158579	ENSGT00940000163258 #14	ENSGT00940000163441.f.a.a.a	ENSGT00940000154360.A.b #32
Lemuriformes	ANCESTRAL SPECIES	9	ENSGT00940000157240	ENSGT00940000159245	ENSGT00940000155587.a.b	ENSGT00390000012174	ENSGT00390000012196	ENSGT00940000159505.x	ENSGT00510000047027	ENSGT00950000183152.B.c.a	ENSGT00940000160159	ENSGT00940000154989	ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000163527.a	ENSGT00940000158579	ENSGT00940000163258 #14	ENSGT00940000163441.f.a.a.a	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18
Lemuriformes_a	ANCESTRAL SPECIES	183											ENSGT00390000008490	ENSGT00390000011821.a ##21	ENSGT00390000003874 #19	ENSGT00940000154826 #20	ENSGT00390000011821.b #21	ENSGT00950000182836.b.b.b.a #22	ENSGT00390000003873 #23	ENSGT00550000074981 #24	ENSGT00390000003706.a.a #25	ENSGT00940000161590 #26	ENSGT00940000162228 #27	ENSGT00940000161104 #28	ENSGT00940000159292 #29	ENSGT00390000018807 #30	ENSGT00940000156404 #31	ENSGT00940000163527.a	ENSGT00940000158579	ENSGT00940000163258 #14	ENSGT00940000163441.f.a.a.a	ENSGT00940000154360.A.b #32	ENSGT00510000047718 #18
Coquerels sifaka	MODERN SPECIES	860																ENSPCOG00000017034 #22	TRAPPC10 (ENSPCOG00000023846) #23	PWP2 (ENSPCOG00000012856) #24	GATD3 (ENSPCOG00000007721) #25	ICOSLG (ENSPCOG00000022096) #26	DNMT3L (ENSPCOG00000022179) #27	AIRE (ENSPCOG00000025712) #28	PFKL (ENSPCOG00000008346) #29	CFAP410 (ENSPCOG00000015158) #30	TRPM2 (ENSPCOG00000000159) #31	ENSPCOG00000015036	ENSPCOG00000020643 #14	TSPEAR (ENSPCOG00000019364) #18	ENSPCOG00000012194	ENSPCOG00000017762 #14	ENSPCOG00000020795
Greater bamboo lemur	MODERN SPECIES	618										HSF2BP (ENSPSMG00000000840)	RRP1B (ENSPSMG00000000878) ##21	PDXK (ENSPSMG00000000981) #19	CSTB (ENSPSMG00000001087) #20	RRP1 (ENSPSMG00000001127) #21	ENSPSMG00000001142	AGPAT3 (ENSPSMG00000001184) #22	ENSPSMG00000001203	TRAPPC10 (ENSPSMG00000001308) #23	PWP2 (ENSPSMG00000001395) #24	ENSPSMG00000001422 #25	ICOSLG (ENSPSMG00000001460) #26	DNMT3L (ENSPSMG00000001478) #27	AIRE (ENSPSMG00000001491) #28	PFKL (ENSPSMG00000001565) #29	TRPM2 (ENSPSMG00000001756) #31	LRRC3 (ENSPSMG00000001980) #32	TSPEAR (ENSPSMG00000002016) #18	ENSPSMG00000002079 #14	ENSPSMG00000002099	ENSPSMG00000002110
Mouse lemur	MODERN SPECIES	24	PDE9A (ENSMICG00000016258)	WDR4 (ENSMICG00000042106)	NDUFV3 (ENSMICG00000046617)	PKNOX1 (ENSMICG00000037878)	CBS (ENSMICG00000041663)	U2AF1 (ENSMICG00000013835)	CRYAA (ENSMICG00000035380)	ENSMICG00000035845	ENSMICG00000029407	SIK1 (ENSMICG00000000552)	HSF2BP (ENSMICG00000004680)	RRP1B (ENSMICG00000004686) ##21	PDXK (ENSMICG00000004696) #19	CSTB (ENSMICG00000031601) #20	RRP1 (ENSMICG00000004700) #21	AGPAT3 (ENSMICG00000047320) #22	TRAPPC10 (ENSMICG00000000992) #23	PWP2 (ENSMICG00000001002) #24	GATD3 (ENSMICG00000001007) #25	ICOSLG (ENSMICG00000001250) #26	DNMT3L (ENSMICG00000048144) #27	AIRE (ENSMICG00000034908) #28	ENSMICG00000046893	PFKL (ENSMICG00000035233) #29	CFAP410 (ENSMICG00000026921) #30	TRPM2 (ENSMICG00000012499) #31	TSPEAR (ENSMICG00000009957) #18	BACE2 (ENSMICG00000027643) #36	FAM3B (ENSMICG00000012335) #34	MX2 (ENSMICG00000012345)	MX1 (ENSMICG00000017322) #35
Bushbaby	MODERN SPECIES	243	SLC37A1 (ENSOGAG00000015740)	PDE9A (ENSOGAG00000015745)	WDR4 (ENSOGAG00000003658)	ENSOGAG00000003661	PKNOX1 (ENSOGAG00000003664)	CBS (ENSOGAG00000016500)	ENSOGAG00000032959	ENSOGAG00000016504	CRYAA (ENSOGAG00000016506)	SIK1 (ENSOGAG00000000860)	HSF2BP (ENSOGAG00000009866)	RRP1B (ENSOGAG00000009872) ##21	PDXK (ENSOGAG00000006093) #19	CSTB (ENSOGAG00000006101) #20	RRP1 (ENSOGAG00000006105) #21	AGPAT3 (ENSOGAG00000003775) #22	TRAPPC10 (ENSOGAG00000012463) #23	PWP2 (ENSOGAG00000012473) #24	GATD3 (ENSOGAG00000012480) #25	ICOSLG (ENSOGAG00000015366) #26	DNMT3L (ENSOGAG00000015368) #27	AIRE (ENSOGAG00000010769) #28	PFKL (ENSOGAG00000027753) #29	CFAP410 (ENSOGAG00000003170) #30	TRPM2 (ENSOGAG00000014398) #31	LRRC3 (ENSOGAG00000013776) #32	TSPEAR (ENSOGAG00000003682) #18	ENSOGAG00000034456	ENSOGAG00000033488	ENSOGAG00000012063 #11	SUMO3 (ENSOGAG00000004715) ##10