Euarchontoglires_A	ANCESTRAL SPECIES		ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Glires	ANCESTRAL SPECIES		ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Rodentia	ANCESTRAL SPECIES		ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Rodentia_A	ANCESTRAL SPECIES		ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420.b ##29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Sciuridae	ANCESTRAL SPECIES		ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420.a.b #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Marmotini	ANCESTRAL SPECIES	21	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420.a.b #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Marmotini_b	ANCESTRAL SPECIES	63	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420.b ##29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Arctic ground squirrel	MODERN SPECIES	49	FLVCR1 (ENSUPAG00010017304) #7	SPATA45 (ENSUPAG00010017301) #8	TATDN3 (ENSUPAG00010017273) #9	NSL1 (ENSUPAG00010017261) #10	BATF3 (ENSUPAG00010017257) #11	ENSUPAG00010017246 #12	ATF3 (ENSUPAG00010017228) #13	NENF (ENSUPAG00010017224) #14	PACC1 (ENSUPAG00010017213) #15	PPP2R5A (ENSUPAG00010017203) #16	DTL (ENSUPAG00010017177) #17	INTS7 (ENSUPAG00010017150) #18	LPGAT1 (ENSUPAG00010017120) #19	NEK2 (ENSUPAG00010017077) #20	ENSUPAG00010017072 #21	SLC30A1 (ENSUPAG00010017069) #22	RD3 (ENSUPAG00010017064) #23	TRAF5 (ENSUPAG00010017058) #24	RCOR3 (ENSUPAG00010016853) #25	KCNH1 (ENSUPAG00010016824) #26	HHAT (ENSUPAG00010016783) #27	SERTAD4 (ENSUPAG00010016763) #28	SYT14 (ENSUPAG00010016724) #29	UTP25 (ENSUPAG00010016705) #30	IRF6 (ENSUPAG00010016697) #31	C1orf74 (ENSUPAG00010016689) #32	TRAF3IP3 (ENSUPAG00010016581) #33	HSD11B1 (ENSUPAG00010016557) #34	G0S2 (ENSUPAG00010016551) #35	LAMB3 (ENSUPAG00010016498) #36	CAMK1G (ENSUPAG00010016438) #37
Squirrel	MODERN SPECIES	157	VASH2 (ENSSTOG00000001090)	FLVCR1 (ENSSTOG00000021795) #7	SPATA45 (ENSSTOG00000034873) #8	TATDN3 (ENSSTOG00000007141) #9	NSL1 (ENSSTOG00000023856) #10	BATF3 (ENSSTOG00000007136) #11	GARIN4 (ENSSTOG00000007130) #12	ATF3 (ENSSTOG00000007121) #13	ENSSTOG00000022293	PACC1 (ENSSTOG00000023262) #15	PPP2R5A (ENSSTOG00000013569) #16	DTL (ENSSTOG00000013557) #17	INTS7 (ENSSTOG00000013543) #18	LPGAT1 (ENSSTOG00000019588) #19	NEK2 (ENSSTOG00000014117) #20	SLC30A1 (ENSSTOG00000019654) #22	RD3 (ENSSTOG00000024456) #23	TRAF5 (ENSSTOG00000011997) #24	RCOR3 (ENSSTOG00000011987) #25	KCNH1 (ENSSTOG00000011975) #26	HHAT (ENSSTOG00000011967) #27	SERTAD4 (ENSSTOG00000012625) #28	SYT14 (ENSSTOG00000022494) ##29	UTP25 (ENSSTOG00000016545) #30	IRF6 (ENSSTOG00000028204) #31	C1orf74 (ENSSTOG00000016543) #32	TRAF3IP3 (ENSSTOG00000016542) #33	HSD11B1 (ENSSTOG00000016541) #34	G0S2 (ENSSTOG00000020915) #35	LAMB3 (ENSSTOG00000023256) #36	CAMK1G (ENSSTOG00000016540) #37
Eurasian red squirrel	MODERN SPECIES	3	SPATA45 (ENSSVLG00005016084) #8	TATDN3 (ENSSVLG00005016168) #9	ENSSVLG00005016573	NSL1 (ENSSVLG00005016609) #10	BATF3 (ENSSVLG00005016663) #11	GARIN4 (ENSSVLG00005016703) #12	ENSSVLG00005016732 #13	NENF (ENSSVLG00005016898) #14	PACC1 (ENSSVLG00005016932) #15	PPP2R5A (ENSSVLG00005017066) #16	ENSSVLG00005017261	DTL (ENSSVLG00005017356) #17	INTS7 (ENSSVLG00005017717) #18	LPGAT1 (ENSSVLG00005017852) #19	NEK2 (ENSSVLG00005017885) #20	SLC30A1 (ENSSVLG00005018112) #22	ENSSVLG00005018155 #21	RD3 (ENSSVLG00005018174) #23	TRAF5 (ENSSVLG00005018217) #24	RCOR3 (ENSSVLG00005018255) #25	ENSSVLG00005018344	KCNH1 (ENSSVLG00005018426) #26	HHAT (ENSSVLG00005018844) #27	SERTAD4 (ENSSVLG00005019187) #28	ENSSVLG00005019238 ##29	ENSSVLG00005019515 #29	UTP25 (ENSSVLG00005019768) #30	IRF6 (ENSSVLG00005019827) #31	C1orf74 (ENSSVLG00005019960) #32	TRAF3IP3 (ENSSVLG00005020051) #33	HSD11B1 (ENSSVLG00005020474) #34
Hystricomorpha	ANCESTRAL SPECIES	49	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374.d #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00940000157923	ENSGT00950000183059.b.a.b	ENSGT00940000155103.a.b	ENSGT00730000111198	ENSGT00940000157060.t	ENSGT00940000155092.b	ENSGT00390000017364	ENSGT00390000015553.a.a.b	ENSGT00940000162691	ENSGT00730000111005	ENSGT00390000016158	ENSGT00940000156546	ENSGT00940000160590	ENSGT00940000156992	ENSGT00940000156766
Hystricomorpha_a	ANCESTRAL SPECIES	13	ENSGT00390000012703.a	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374.d #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00940000156484.b #22	ENSGT00940000157923	ENSGT00950000183059.b.a.b	ENSGT00940000155103.a.b	ENSGT00730000111198	ENSGT00940000157060.t	ENSGT00940000155092.b	ENSGT00390000017364	ENSGT00390000015553.a.a.b	ENSGT00940000162691	ENSGT00730000111005	ENSGT00390000016158	ENSGT00940000156546	ENSGT00940000160590	ENSGT00940000156992	ENSGT00940000156766
Guinea pig	MODERN SPECIES	13	VASH2 (ENSCPOG00000003871)	ENSCPOG00000023888	FLVCR1 (ENSCPOG00000011300) #7	SPATA45 (ENSCPOG00000002457) #8	TATDN3 (ENSCPOG00000002454) #9	NSL1 (ENSCPOG00000002451) #10	BATF3 (ENSCPOG00000032323) #11	ATF3 (ENSCPOG00000034947) #13	ENSCPOG00000033847	PACC1 (ENSCPOG00000009329) #15	PPP2R5A (ENSCPOG00000040049) #16	DTL (ENSCPOG00000014965) #17	INTS7 (ENSCPOG00000014960) #18	LPGAT1 (ENSCPOG00000011269) #19	NEK2 (ENSCPOG00000011264) #20	SLC30A1 (ENSCPOG00000013692) #22	PSEN2 (ENSCPOG00000001827)	PLD5 (ENSCPOG00000033411)	ENSCPOG00000002221	ENSCPOG00000002683	ENSCPOG00000034860	SDCCAG8 (ENSCPOG00000015503)	AKT3 (ENSCPOG00000015504)	ZBTB18 (ENSCPOG00000035384)	C1orf100 (ENSCPOG00000002339)	ADSS2 (ENSCPOG00000002342)	DESI2 (ENSCPOG00000002091)	COX20 (ENSCPOG00000032295)	HNRNPU (ENSCPOG00000011887)	EFCAB2 (ENSCPOG00000024335)	KIF26B (ENSCPOG00000001048)
Hystricomorpha_b	ANCESTRAL SPECIES	4	ENSGT00390000012703.a	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374.d #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00940000156484.b #22	ENSGT00940000157923	ENSGT00950000183059.b.a.b	ENSGT00660000097201	ENSGT00940000155103.a.b	ENSGT00730000111198	ENSGT00940000157060.t	ENSGT00940000155092.b	ENSGT00390000017364	ENSGT00390000015553.a.a.b	ENSGT00940000162691	ENSGT00730000111005	ENSGT00390000016158	ENSGT00940000156546	ENSGT00940000160590	ENSGT00940000156992
Degu	MODERN SPECIES	58	FLVCR1 (ENSODEG00000013456) #7	SPATA45 (ENSODEG00000014271) #8	TATDN3 (ENSODEG00000013799) #9	NSL1 (ENSODEG00000014696) #10	ENSODEG00000013720 #11	GARIN4 (ENSODEG00000013574) #12	ATF3 (ENSODEG00000013598) #13	NENF (ENSODEG00000016432) #14	PACC1 (ENSODEG00000013328) #15	PPP2R5A (ENSODEG00000014272) #16	DTL (ENSODEG00000016385) #17	INTS7 (ENSODEG00000013809) #18	LPGAT1 (ENSODEG00000013429) #19	ENSODEG00000014021 #20	ENSODEG00000013939	SLC30A1 (ENSODEG00000014581) #22	PSEN2 (ENSODEG00000013898)	PLD5 (ENSODEG00000013817)	ENSODEG00000014152	ENSODEG00000014979	ENSODEG00000013620	ENSODEG00000016144	ENSODEG00000014847	SDCCAG8 (ENSODEG00000013437)	ENSODEG00000013767	AKT3 (ENSODEG00000013255)	ZBTB18 (ENSODEG00000014080)	C1orf100 (ENSODEG00000012902)	ADSS2 (ENSODEG00000015411)	ENSODEG00000013295	ENSODEG00000013410
Long-tailed chinchilla	MODERN SPECIES	113	RPS6KC1 (ENSCLAG00000008718)	ANGEL2 (ENSCLAG00000007133)	VASH2 (ENSCLAG00000008864)	FLVCR1 (ENSCLAG00000012241) #7	SPATA45 (ENSCLAG00000008856) #8	TATDN3 (ENSCLAG00000008909) #9	NSL1 (ENSCLAG00000015217) #10	ATF3 (ENSCLAG00000013767) #13	ENSCLAG00000007912	PACC1 (ENSCLAG00000009570) #15	PPP2R5A (ENSCLAG00000012816) #16	DTL (ENSCLAG00000014236) #17	INTS7 (ENSCLAG00000011748) #18	LPGAT1 (ENSCLAG00000011509) #19	NEK2 (ENSCLAG00000010880) #20	SLC30A1 (ENSCLAG00000009695) #22	PSEN2 (ENSCLAG00000013788)	PLD5 (ENSCLAG00000014400)	ENSCLAG00000010377	CEP170 (ENSCLAG00000015564)	SDCCAG8 (ENSCLAG00000011676)	ENSCLAG00000009649	ZBTB18 (ENSCLAG00000015788)	C1orf100 (ENSCLAG00000007599)	ADSS2 (ENSCLAG00000008748)	CATSPERE (ENSCLAG00000009169)	DESI2 (ENSCLAG00000011829)	HNRNPU (ENSCLAG00000007100)	ENSCLAG00000007770	EFCAB2 (ENSCLAG00000008343)	KIF26B (ENSCLAG00000012108)
Naked mole-rat female	MODERN SPECIES	16	PTPN14 (ENSHGLG00000006819)	SMYD2 (ENSHGLG00000005014)	PROX1 (ENSHGLG00000004005)	ENSHGLG00000011298	ANGEL2 (ENSHGLG00000009577)	ENSHGLG00000007863	ENSHGLG00000006406 #13	NENF (ENSHGLG00000005390) #14	PACC1 (ENSHGLG00000004632) #15	ENSHGLG00000003379 #16	DTL (ENSHGLG00000006063) #17	INTS7 (ENSHGLG00000005372) #18	LPGAT1 (ENSHGLG00000008115) #19	NEK2 (ENSHGLG00000004280) #20	ENSHGLG00000028910 #21	ENSHGLG00000037874 #22	ENSHGLG00000005464	ENSHGLG00000032112	MAP1LC3C (ENSHGLG00000037027)	ENSHGLG00000004656	ENSHGLG00000040176	ENSHGLG00000006833	ENSHGLG00000043505	ENSHGLG00000011191	ENSHGLG00000006465	ENSHGLG00000038674	ENSHGLG00000004271	AKT3 (ENSHGLG00000006424)	ENSHGLG00000043051	ZBTB18 (ENSHGLG00000003880)	ADSS (ENSHGLG00000007672)
Rodentia_B	ANCESTRAL SPECIES		ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Kangaroo rat	MODERN SPECIES	345	Vash2 (ENSDORG00000000751)	Flvcr1 (ENSDORG00000002942) #7	Spata45 (ENSDORG00000014481) #8	Tatdn3 (ENSDORG00000014148) #9	Nsl1 (ENSDORG00000028451) #10	Batf3 (ENSDORG00000025907) #11	Garin4 (ENSDORG00000006027) #12	Atf3 (ENSDORG00000025141) #13	Nenf (ENSDORG00000027260) #14	Pacc1 (ENSDORG00000007633) #15	Ppp2r5a (ENSDORG00000007631) #16	Dtl (ENSDORG00000004346) #17	Ints7 (ENSDORG00000004343) #18	Lpgat1 (ENSDORG00000025440) #19	Nek2 (ENSDORG00000030036) #20	Slc30a1 (ENSDORG00000028201) #22	Rd3 (ENSDORG00000006538) #23	Traf5 (ENSDORG00000006546) #24	Rcor3 (ENSDORG00000012726) #25	ENSDORG00000030102	Kcnh1 (ENSDORG00000005642) #26	Hhat (ENSDORG00000016124) #27	Sertad4 (ENSDORG00000026519) #28	Syt14 (ENSDORG00000010099) #29	Utp25 (ENSDORG00000008892) #30	Irf6 (ENSDORG00000008891) #31	A130010J15Rik (ENSDORG00000008890) #32	ENSDORG00000028685	ENSDORG00000008886 #33	Hsd11b1 (ENSDORG00000028793) #34	Lamb3 (ENSDORG00000003991) #36
Myomorpha	ANCESTRAL SPECIES	48	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Muroidea	ANCESTRAL SPECIES	9	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Muroidea_A	ANCESTRAL SPECIES	12	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Cricetidae	ANCESTRAL SPECIES	13	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Cricetidae_B	ANCESTRAL SPECIES	8	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Prairie vole	MODERN SPECIES	14	Flvcr1 (ENSMOCG00000013229) #7	Spata45 (ENSMOCG00000017094) #8	Tatdn3 (ENSMOCG00000019831) #9	Nsl1 (ENSMOCG00000020317) #10	Batf3 (ENSMOCG00000020540) #11	Garin4 (ENSMOCG00000017084) #12	Atf3 (ENSMOCG00000019538) #13	Nenf (ENSMOCG00000010741) #14	Pacc1 (ENSMOCG00000015297) #15	Ppp2r5a (ENSMOCG00000018187) #16	ENSMOCG00000021658 #17	Ints7 (ENSMOCG00000015050) #18	Lpgat1 (ENSMOCG00000016824) #19	Nek2 (ENSMOCG00000012191) #20	ENSMOCG00000015595	ENSMOCG00000007231 #22	Rd3 (ENSMOCG00000015661) #23	Traf5 (ENSMOCG00000017302) #24	Rcor3 (ENSMOCG00000009813) #25	Kcnh1 (ENSMOCG00000001718) #26	Hhat (ENSMOCG00000017999) #27	Sertad4 (ENSMOCG00000021162) #28	Syt14 (ENSMOCG00000000936) #29	Utp25 (ENSMOCG00000018890) #30	Irf6 (ENSMOCG00000016987) #31	A130010J15Rik (ENSMOCG00000003288) #32	Traf3ip3 (ENSMOCG00000010371) #33	Hsd11b1 (ENSMOCG00000002294) #34	G0s2 (ENSMOCG00000002733) #35	Lamb3 (ENSMOCG00000016300) #36	Camk1g (ENSMOCG00000018302) #37
Northern American deer mouse	MODERN SPECIES	2	Flvcr1 (ENSPEMG00000014742) #7	Spata45 (ENSPEMG00000015887) #8	Tatdn3 (ENSPEMG00000016778) #9	Nsl1 (ENSPEMG00000001946) #10	Batf3 (ENSPEMG00000007835) #11	ENSPEMG00000029759 #13	Garin4 (ENSPEMG00000027162) #12	ENSPEMG00000024914 #13	Nenf (ENSPEMG00000004190) #14	Ppp2r5a (ENSPEMG00000007353) #16	Dtl (ENSPEMG00000009566) #17	Ints7 (ENSPEMG00000014500) #18	Lpgat1 (ENSPEMG00000016230) #19	Nek2 (ENSPEMG00000011480) #20	ENSPEMG00000031137 #21	Slc30a1 (ENSPEMG00000002874) #22	Rd3 (ENSPEMG00000020626) #23	Traf5 (ENSPEMG00000022373) #24	Rcor3 (ENSPEMG00000007457) #25	Kcnh1 (ENSPEMG00000010427) #26	Hhat (ENSPEMG00000001916) #27	Sertad4 (ENSPEMG00000010470) #28	Syt14 (ENSPEMG00000000255) #29	ENSPEMG00000029864	Utp25 (ENSPEMG00000000712) #30	Irf6 (ENSPEMG00000020332) #31	A130010J15Rik (ENSPEMG00000022277) #32	Traf3ip3 (ENSPEMG00000021211) #33	Hsd11b1 (ENSPEMG00000009872) #34	G0s2 (ENSPEMG00000029839) #35	Lamb3 (ENSPEMG00000017689) #36
Cricetinae	ANCESTRAL SPECIES	4	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Chinese hamster chok1gshd	MODERN SPECIES	2	Flvcr1 (ENSCGRG00001021256) #7	Spata45 (ENSCGRG00001020534) #8	Tatdn3 (ENSCGRG00001019330) #9	Nsl1 (ENSCGRG00001017667) #10	Batf3 (ENSCGRG00001017448) #11	Garin4 (ENSCGRG00001010554) #12	Atf3 (ENSCGRG00001013063) #13	Nenf (ENSCGRG00001012055) #14	Pacc1 (ENSCGRG00001006900) #15	Ppp2r5a (ENSCGRG00001002484) #16	Dtl (ENSCGRG00001023163) #17	ENSCGRG00001020112 #18	Lpgat1 (ENSCGRG00001001129) #19	Nek2 (ENSCGRG00001023977) #20	ENSCGRG00001017398 #21	Slc30a1 (ENSCGRG00001025069) #22	Rd3 (ENSCGRG00001024990) #23	Traf5 (ENSCGRG00001022795) #24	Rcor3 (ENSCGRG00001020719) #25	Kcnh1 (ENSCGRG00001014833) #26	Hhat (ENSCGRG00001018458) #27	Sertad4 (ENSCGRG00001015220) #28	Syt14 (ENSCGRG00001011845) #29	Utp25 (ENSCGRG00001019879) #30	Irf6 (ENSCGRG00001005349) #31	A130010J15Rik (ENSCGRG00001002638) #32	ENSCGRG00001004266 #33	Hsd11b1 (ENSCGRG00001024469) #34	G0s2 (ENSCGRG00001010736) #35	Lamb3 (ENSCGRG00001012912) #36	Camk1g (ENSCGRG00001011909) #37
Golden Hamster	MODERN SPECIES	755	Spata45 (ENSMAUG00000016023) #8	Tatdn3 (ENSMAUG00000018308) #9	Nsl1 (ENSMAUG00000016792) #10	Batf3 (ENSMAUG00000014205) #11	Garin4 (ENSMAUG00000013757) #12	Atf3 (ENSMAUG00000011123) #13	Nenf (ENSMAUG00000010743) #14	Pacc1 (ENSMAUG00000009322) #15	Ppp2r5a (ENSMAUG00000000319) #16	ENSMAUG00000021059 #17	Ints7 (ENSMAUG00000002724) #18	ENSMAUG00000000601	Lpgat1 (ENSMAUG00000000283) #19	Nek2 (ENSMAUG00000007374) #20	ENSMAUG00000001247 #21	Slc30a1 (ENSMAUG00000021127) #22	Rd3 (ENSMAUG00000019032) #23	Traf5 (ENSMAUG00000001323) #24	Rcor3 (ENSMAUG00000000503) #25	Kcnh1 (ENSMAUG00000019709) #26	Hhat (ENSMAUG00000008212) #27	Sertad4 (ENSMAUG00000000932) #28	ENSMAUG00000000396	Syt14 (ENSMAUG00000001868) #29	Utp25 (ENSMAUG00000017463) #30	Irf6 (ENSMAUG00000019003) #31	Traf3ip3 (ENSMAUG00000000850) #33	Hsd11b1 (ENSMAUG00000012170) #34	G0s2 (ENSMAUG00000010676) #35	Lamb3 (ENSMAUG00000011370) #36	Camk1g (ENSMAUG00000001022) #37
Murinae	ANCESTRAL SPECIES	11	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Mus	ANCESTRAL SPECIES	5	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Mus_A	ANCESTRAL SPECIES	5	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Mus_B	ANCESTRAL SPECIES	7	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Mouse	MODERN SPECIES		Vash2 (ENSMUSG00000037568)	Flvcr1 (ENSMUSG00000066595) #7	Spata45 (ENSMUSG00000057072) #8	Tatdn3 (ENSMUSG00000026632) #9	Nsl1 (ENSMUSG00000062510) #10	Batf3 (ENSMUSG00000026630) #11	Garin4 (ENSMUSG00000091017) #12	Atf3 (ENSMUSG00000026628) #13	Nenf (ENSMUSG00000037499) #14	Pacc1 (ENSMUSG00000026627) #15	Ppp2r5a (ENSMUSG00000026626) #16	Dtl (ENSMUSG00000037474) #17	Ints7 (ENSMUSG00000037461) #18	Lpgat1 (ENSMUSG00000026623) #19	Nek2 (ENSMUSG00000026622) #20	Slc30a1 (ENSMUSG00000037434) #22	Rd3 (ENSMUSG00000049353) #23	Traf5 (ENSMUSG00000026637) #24	Rcor3 (ENSMUSG00000037395) #25	Kcnh1 (ENSMUSG00000058248) #26	Hhat (ENSMUSG00000037375) #27	Sertad4 (ENSMUSG00000016262) #28	Syt14 (ENSMUSG00000016200) #29	Utp25 (ENSMUSG00000016181) #30	Irf6 (ENSMUSG00000026638) #31	A130010J15Rik (ENSMUSG00000079144) #32	Traf3ip3 (ENSMUSG00000037318) #33	Lamb3 (ENSMUSG00000026639) #36	Hsd11b1 (ENSMUSG00000016194) #34	G0s2 (ENSMUSG00000009633) #35	Camk1g (ENSMUSG00000016179) #37
Mus_C	ANCESTRAL SPECIES	1	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000162770 #12	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00960000186787 #21	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Steppe mouse	MODERN SPECIES	2667													ENSMSIG00000026735 #19	Nek2 (ENSMSIG00000026753) #20	ENSMSIG00000026779 #21	Slc30a1 (ENSMSIG00000026786) #22	ENSMSIG00000026792	Rd3 (ENSMSIG00000026807) #23	ENSMSIG00000026824	Traf5 (ENSMSIG00000026837) #24	Rcor3 (ENSMSIG00000026869) #25	Kcnh1 (ENSMSIG00000027136) #26	ENSMSIG00000027154
spretus	MODERN SPECIES		Vash2 (MGP_SPRETEiJ_G0015841)	Flvcr1 (MGP_SPRETEiJ_G0015842) #7	Spata45 (MGP_SPRETEiJ_G0015843) #8	Tatdn3 (MGP_SPRETEiJ_G0015844) #9	Nsl1 (MGP_SPRETEiJ_G0015845) #10	Batf3 (MGP_SPRETEiJ_G0015846) #11	Garin4 (MGP_SPRETEiJ_G0015847) #12	Atf3 (MGP_SPRETEiJ_G0015848) #13	Nenf (MGP_SPRETEiJ_G0015849) #14	Pacc1 (MGP_SPRETEiJ_G0015850) #15	Ppp2r5a (MGP_SPRETEiJ_G0015851) #16	Dtl (MGP_SPRETEiJ_G0015852) #17	Ints7 (MGP_SPRETEiJ_G0015853) #18	Lpgat1 (MGP_SPRETEiJ_G0015854) #19	Nek2 (MGP_SPRETEiJ_G0015855) #20	Slc30a1 (MGP_SPRETEiJ_G0015856) #22	Rd3 (MGP_SPRETEiJ_G0015857) #23	MGP_SPRETEiJ_G0015858 #24	Rcor3 (MGP_SPRETEiJ_G0015859) #25	Kcnh1 (MGP_SPRETEiJ_G0015860) #26	Hhat (MGP_SPRETEiJ_G0015861) #27	Sertad4 (MGP_SPRETEiJ_G0015862) #28	MGP_SPRETEiJ_G0015863 #29	Utp25 (MGP_SPRETEiJ_G0015864) #30	Irf6 (MGP_SPRETEiJ_G0015865) #31	A130010J15Rik (MGP_SPRETEiJ_G0015866) #32	Traf3ip3 (MGP_SPRETEiJ_G0015867) #33	Lamb3 (MGP_SPRETEiJ_G0015868) #36	Hsd11b1 (MGP_SPRETEiJ_G0015869) #34	G0s2 (MGP_SPRETEiJ_G0015870) #35	Camk1g (MGP_SPRETEiJ_G0015871) #37
Ryukyu mouse	MODERN SPECIES		Vash2 (MGP_CAROLIEiJ_G0015041)	Flvcr1 (MGP_CAROLIEiJ_G0015042) #7	Spata45 (MGP_CAROLIEiJ_G0015043) #8	Tatdn3 (MGP_CAROLIEiJ_G0015044) #9	Nsl1 (MGP_CAROLIEiJ_G0015045) #10	Batf3 (MGP_CAROLIEiJ_G0015046) #11	Garin4 (MGP_CAROLIEiJ_G0015047) #12	Atf3 (MGP_CAROLIEiJ_G0015048) #13	Nenf (MGP_CAROLIEiJ_G0015049) #14	Pacc1 (MGP_CAROLIEiJ_G0015050) #15	Ppp2r5a (MGP_CAROLIEiJ_G0015051) #16	Dtl (MGP_CAROLIEiJ_G0015052) #17	Ints7 (MGP_CAROLIEiJ_G0015053) #18	Lpgat1 (MGP_CAROLIEiJ_G0015054) #19	Nek2 (MGP_CAROLIEiJ_G0015055) #20	Slc30a1 (MGP_CAROLIEiJ_G0015056) #22	Rd3 (MGP_CAROLIEiJ_G0015057) #23	MGP_CAROLIEiJ_G0015058 #24	Rcor3 (MGP_CAROLIEiJ_G0015059) #25	Kcnh1 (MGP_CAROLIEiJ_G0015060) #26	Hhat (MGP_CAROLIEiJ_G0015061) #27	Sertad4 (MGP_CAROLIEiJ_G0015062) #28	MGP_CAROLIEiJ_G0015063 #29	Utp25 (MGP_CAROLIEiJ_G0015064) #30	Irf6 (MGP_CAROLIEiJ_G0015065) #31	A130010J15Rik (MGP_CAROLIEiJ_G0015066) #32	Traf3ip3 (MGP_CAROLIEiJ_G0015067) #33	Lamb3 (MGP_CAROLIEiJ_G0015068) #36	Hsd11b1 (MGP_CAROLIEiJ_G0015069) #34	G0s2 (MGP_CAROLIEiJ_G0015070) #35	Camk1g (MGP_CAROLIEiJ_G0015071) #37
Shrew mouse	MODERN SPECIES	18	Vash2 (MGP_PahariEiJ_G0028273)	Flvcr1 (MGP_PahariEiJ_G0028274) #7	Spata45 (MGP_PahariEiJ_G0028275) #8	MGP_PahariEiJ_G0028276 #9	Nsl1 (MGP_PahariEiJ_G0028277) #10	Batf3 (MGP_PahariEiJ_G0028278) #11	Garin4 (MGP_PahariEiJ_G0028279) #12	Atf3 (MGP_PahariEiJ_G0028280) #13	Nenf (MGP_PahariEiJ_G0028281) #14	Pacc1 (MGP_PahariEiJ_G0028282) #15	Ppp2r5a (MGP_PahariEiJ_G0028283) #16	Dtl (MGP_PahariEiJ_G0028284) #17	Ints7 (MGP_PahariEiJ_G0028285) #18	Lpgat1 (MGP_PahariEiJ_G0028286) #19	Nek2 (MGP_PahariEiJ_G0028287) #20	Slc30a1 (MGP_PahariEiJ_G0028288) #22	Rd3 (MGP_PahariEiJ_G0028289) #23	MGP_PahariEiJ_G0028290 #24	Rcor3 (MGP_PahariEiJ_G0028291) #25	Kcnh1 (MGP_PahariEiJ_G0028292) #26	Hhat (MGP_PahariEiJ_G0028293) #27	Sertad4 (MGP_PahariEiJ_G0028294) #28	MGP_PahariEiJ_G0028295 #29	Utp25 (MGP_PahariEiJ_G0028296) #30	Irf6 (MGP_PahariEiJ_G0028297) #31	A130010J15Rik (MGP_PahariEiJ_G0028298) #32	Traf3ip3 (MGP_PahariEiJ_G0028299) #33	MGP_PahariEiJ_G0028300 #36	Hsd11b1 (MGP_PahariEiJ_G0028301) #34	G0s2 (MGP_PahariEiJ_G0028302) #35	Camk1g (MGP_PahariEiJ_G0028303) #37
Rat	MODERN SPECIES	4	SPATA45 (ENSRNOG00000048659) #8	Tatdn3 (ENSRNOG00000046460) #9	Nsl1 (ENSRNOG00000042286) #10	Batf3 (ENSRNOG00000003716) #11	Garin4 (ENSRNOG00000029371) #12	Atf3 (ENSRNOG00000003745) #13	Nenf (ENSRNOG00000003833) #14	Pacc1 (ENSRNOG00000003915) #15	Ppp2r5a (ENSRNOG00000000068) #16	Dtl (ENSRNOG00000004195) #17	Ints7 (ENSRNOG00000004263) #18	RGD1560186 (ENSRNOG00000031098)	Lpgat1 (ENSRNOG00000004402) #19	Nek2l1 (ENSRNOG00000004487) #20	AABR07022168.1 (ENSRNOG00000059863) #21	Slc30a1 (ENSRNOG00000004749) #22	Rd3 (ENSRNOG00000050766) #23	Traf5 (ENSRNOG00000047957) #24	Rcor3 (ENSRNOG00000046445) #25	Kcnh1 (ENSRNOG00000003841) #26	Hhat (ENSRNOG00000003925) #27	Sertad4 (ENSRNOG00000060773) #28	Syt14 (ENSRNOG00000046139) #29	Utp25 (ENSRNOG00000004789) #30	Irf6 (ENSRNOG00000005082) #31	LOC100125367 (ENSRNOG00000005558) #32	Traf3ip3 (ENSRNOG00000005565) #33	Hsd11b1 (ENSRNOG00000005861)	G0s2 (ENSRNOG00000006019) #35	Lamb3 (ENSRNOG00000006025) #36	Camk1g (ENSRNOG00000006470) #37
Upper Galilee mountains blind mole rat	MODERN SPECIES	1872	Angel2 (ENSNGAG00000009708)	Vash2 (ENSNGAG00000000617)	Flvcr1 (ENSNGAG00000009986) #7	Spata45 (ENSNGAG00000001409) #8	Tatdn3 (ENSNGAG00000015819) #9	Nsl1 (ENSNGAG00000021030) #10	Batf3 (ENSNGAG00000012341) #11	Atf3 (ENSNGAG00000017384) #13	Nenf (ENSNGAG00000015999) #14	Pacc1 (ENSNGAG00000001036) #15	Ppp2r5a (ENSNGAG00000011634) #16	Dtl (ENSNGAG00000015330) #17	Ints7 (ENSNGAG00000011793) #18	Lpgat1 (ENSNGAG00000020207) #19	Nek2 (ENSNGAG00000016403) #20	Slc30a1 (ENSNGAG00000018380) #22	Rd3 (ENSNGAG00000016374) #23	Traf5 (ENSNGAG00000014232) #24	Rcor3 (ENSNGAG00000010546) #25	Kcnh1 (ENSNGAG00000007409) #26	Hhat (ENSNGAG00000000647) #27	ENSNGAG00000014711 #28	Syt14 (ENSNGAG00000008408) #29	Utp25 (ENSNGAG00000014664) #30	Irf6 (ENSNGAG00000006422) #31	A130010J15Rik (ENSNGAG00000010551) #32	ENSNGAG00000000822	ENSNGAG00000000847 #33	Hsd11b1 (ENSNGAG00000011047) #34	G0s2 (ENSNGAG00000006335) #35	Lamb3 (ENSNGAG00000002418) #36
Lagomorpha	ANCESTRAL SPECIES	15	ENSGT00940000157391	ENSGT00390000012703.a	ENSGT01030000234625.B.c #7	ENSGT00390000018676 #8	ENSGT00720000108846.a #9	ENSGT00390000001374 #10	ENSGT00940000161120 #11	ENSGT00940000156376 #13	ENSGT00940000162504 #14	ENSGT00390000017528 #15	ENSGT01030000234620.a.b.b.b #16	ENSGT00530000064210 #17	ENSGT00390000011724 #18	ENSGT00950000182836.b.a.b #19	ENSGT00940000156989 #20	ENSGT00940000156484.b #22	ENSGT00390000002089.a.b #23	ENSGT00940000160954 #24	ENSGT00940000154196.b #25	ENSGT00940000155793 #26	ENSGT00530000063629.a #27	ENSGT00530000063876.a #28	ENSGT00940000159420 #29	ENSGT00390000000709 #30	ENSGT00940000157451 #31	ENSGT00390000002240 #32	ENSGT00940000160260 #33	ENSGT00940000160097 #34	ENSGT00390000005294 #35	ENSGT00940000160731 #36	ENSGT00940000156872 #37
Rabbit	MODERN SPECIES	7	VASH2 (ENSOCUG00000008579)	FLVCR1 (ENSOCUG00000004804) #7	SPATA45 (ENSOCUG00000004799) #8	ENSOCUG00000004792 #9	NSL1 (ENSOCUG00000004789) #10	GARIN4 (ENSOCUG00000017415) #12	ATF3 (ENSOCUG00000017424) #13	PACC1 (ENSOCUG00000009061) #15	NENF (ENSOCUG00000010810) #14	PPP2R5A (ENSOCUG00000017572) #16	ENSOCUG00000023322	DTL (ENSOCUG00000000437) #17	INTS7 (ENSOCUG00000004204) #18	LPGAT1 (ENSOCUG00000004201) #19	NEK2 (ENSOCUG00000009715) #20	SLC30A1 (ENSOCUG00000012398) #22	ENSOCUG00000004603 #23	TRAF5 (ENSOCUG00000009132) #24	RCOR3 (ENSOCUG00000009121) #25	KCNH1 (ENSOCUG00000000657) #26	ENSOCUG00000030106	HHAT (ENSOCUG00000000655) #27	ENSOCUG00000012833 #29	UTP25 (ENSOCUG00000004040) #30	IRF6 (ENSOCUG00000004035) #31	C1orf74 (ENSOCUG00000004033) #32	TRAF3IP3 (ENSOCUG00000004027) #33	HSD11B1 (ENSOCUG00000004024) #34	G0S2 (ENSOCUG00000004023) #35	LAMB3 (ENSOCUG00000004013) #36	CAMK1G (ENSOCUG00000003999) #37
Pika	MODERN SPECIES	4722															ENSOPRG00000009102 #20	SLC30A1 (ENSOPRG00000009088) #22	RD3 (ENSOPRG00000009083) #23	ENSOPRG00000009061 #24
Tree shrew	MODERN SPECIES	8527																SLC30A1 (ENSTBEG00000000174) #22