Gnathostomata ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Euteleostomi ANCESTRAL SPECIES 1278 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 Sarcopterygii ANCESTRAL SPECIES 1091 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 Tetrapoda ANCESTRAL SPECIES 52 ENSGT00390000002944 ENSGT00940000161052 ENSGT00390000013978.d ENSGT00940000156832 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000159891 ENSGT00940000161997.b ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00390000007809.a ENSGT00940000161132 ENSGT00940000161665 ENSGT01100000266433 ENSGT00950000183019.f.b.a ENSGT00940000160329 ENSGT00940000160653 ENSGT00950000183080.a.a ENSGT00940000159521 ENSGT00940000153804.B ENSGT00940000158666 ENSGT00940000155606.b Amniota ANCESTRAL SPECIES 410 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a #22 Mammalia ANCESTRAL SPECIES 324 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a #22 Theria ANCESTRAL SPECIES 55 ENSGT00940000160018 ENSGT00390000002259 ENSGT00390000002575 ENSGT00940000153654 ENSGT00950000183203.d.h ENSGT00940000159978 ENSGT00550000074798.a.a ENSGT00940000158664 ENSGT00950000182843.a.b ENSGT00820000127055.b ENSGT00940000164254 ENSGT00940000160448 ENSGT00940000158190 ENSGT00730000111394 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000154297.B ENSGT01020000230351.F ENSGT00940000154637 ENSGT00950000182825.B ENSGT00390000014845 ENSGT00390000006044 ENSGT00390000007249 ENSGT00730000111140 ENSGT00940000159598 ENSGT00950000183101.b ENSGT00390000017663 Eutheria ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Boreoeutheria ANCESTRAL SPECIES 14 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT01040000242059 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01080000257504 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Laurasiatheria ANCESTRAL SPECIES 12 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000164110 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Laurasiatheria_a DUPLICATION Laurasiatheria_a ANCESTRAL SPECIES 171 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.d #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Carnivora ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Felidae ANCESTRAL SPECIES 15 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.d #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Panthera ANCESTRAL SPECIES 9 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.d #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Panthera_a ANCESTRAL SPECIES 6 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.d #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 leopard MODERN SPECIES 12 FEV (ENSPPRG00000009437) #7 CRYBA2 (ENSPPRG00000009580) #8 CFAP65 (ENSPPRG00000012363) #9 IHH (ENSPPRG00000012622) #10 NHEJ1 (ENSPPRG00000012808) #11 SLC23A3 (ENSPPRG00000013147) #12 CNPPD1 (ENSPPRG00000013483) #13 RETREG2 (ENSPPRG00000013844) #14 ZFAND2B (ENSPPRG00000015562) #15 ABCB6 (ENSPPRG00000016666) #16 ATG9A (ENSPPRG00000018424) #17 ANKZF1 (ENSPPRG00000018883) #18 GLB1L (ENSPPRG00000020047) #19 STK16 (ENSPPRG00000025038) #20 TUBA4A (ENSPPRG00000025015) #21 TUBA4B (ENSPPRG00000025008) #22 DNAJB2 (ENSPPRG00000024983) #23 PTPRN (ENSPPRG00000024874) #24 ENSPPRG00000024830 #25 DNPEP (ENSPPRG00000024638) #26 DES (ENSPPRG00000024580) #27 SPEG (ENSPPRG00000024053) #28 ENSPPRG00000014520 #29 SPEGNB (ENSPPRG00000023685) #30 ENSPPRG00000023503 #31 GMPPA (ENSPPRG00000000543) #32 ASIC4 (ENSPPRG00000002174) #33 CHPF (ENSPPRG00000002929) #34 TMEM198 (ENSPPRG00000003052) #35 OBSL1 (ENSPPRG00000004325) #36 INHA (ENSPPRG00000004559) #37 Tiger MODERN SPECIES 240 ENSPTIG00000005440 CRYBA2 (ENSPTIG00000007397) #8 CFAP65 (ENSPTIG00000008075) #9 ENSPTIG00000013562 #10 NHEJ1 (ENSPTIG00000014677) #11 SLC23A3 (ENSPTIG00000015352) #12 CNPPD1 (ENSPTIG00000015930) #13 RETREG2 (ENSPTIG00000016225) #14 ZFAND2B (ENSPTIG00000017139) #15 ABCB6 (ENSPTIG00000019628) #16 ATG9A (ENSPTIG00000019791) #17 ANKZF1 (ENSPTIG00000020141) #18 GLB1L (ENSPTIG00000020431) #19 STK16 (ENSPTIG00000021342) #20 TUBA4A (ENSPTIG00000021758) #21 TUBA4B (ENSPTIG00000002566) #22 DNAJB2 (ENSPTIG00000002946) #23 PTPRN (ENSPTIG00000005870) #24 ENSPTIG00000008992 #25 DNPEP (ENSPTIG00000009304) #26 DES (ENSPTIG00000009804) #27 ENSPTIG00000010202 #28 SPEGNB (ENSPTIG00000010733) #30 ENSPTIG00000005626 #29 GMPPA (ENSPTIG00000011484) #32 ENSPTIG00000013431 #31 ASIC4 (ENSPTIG00000013757) #33 ENSPTIG00000014241 #34 TMEM198 (ENSPTIG00000014338) #35 OBSL1 (ENSPTIG00000015087) #36 INHA (ENSPTIG00000016050) #37 Cat MODERN SPECIES 239 CDK5R2 (ENSFCAG00000043220) FEV (ENSFCAG00000045613) #7 CRYBA2 (ENSFCAG00000007487) #8 CFAP65 (ENSFCAG00000007488) #9 IHH (ENSFCAG00000029276) #10 NHEJ1 (ENSFCAG00000035699) #11 SLC23A3 (ENSFCAG00000007491) #12 RETREG2 (ENSFCAG00000011233) #14 ZFAND2B (ENSFCAG00000011237) #15 ABCB6 (ENSFCAG00000011240) #16 ATG9A (ENSFCAG00000011243) #17 ANKZF1 (ENSFCAG00000011246) #18 GLB1L (ENSFCAG00000011248) #19 STK16 (ENSFCAG00000030820) #20 TUBA4A (ENSFCAG00000038881) #21 TUBA4B (ENSFCAG00000042631) #22 DNAJB2 (ENSFCAG00000011252) #23 PTPRN (ENSFCAG00000011253) #24 DNPEP (ENSFCAG00000011255) #26 DES (ENSFCAG00000011256) #27 SPEG (ENSFCAG00000036538) #28 SPEGNB (ENSFCAG00000039963) #30 ENSFCAG00000037442 #29 GMPPA (ENSFCAG00000022252) #32 ENSFCAG00000039778 #31 ASIC4 (ENSFCAG00000006664) #33 CHPF (ENSFCAG00000039550) #34 TMEM198 (ENSFCAG00000006665) #35 OBSL1 (ENSFCAG00000006666) #36 INHA (ENSFCAG00000006667) #37 STK11IP (ENSFCAG00000006668) Artiodactyla ANCESTRAL SPECIES 185 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.d #22 Suina ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Chacoan peccary MODERN SPECIES 99 SIM2 (ENSCWAG00000008373) CLDN14 (ENSCWAG00000008352) CHAF1B (ENSCWAG00000008229) MORC3 (ENSCWAG00000008171) DOP1B (ENSCWAG00000007799) CBR3 (ENSCWAG00000003335) ENSCWAG00000003327 ENSCWAG00000003319 SETD4 (ENSCWAG00000003308) ENSCWAG00000003295 RUNX1 (ENSCWAG00000003243) CLIC6 (ENSCWAG00000003138) RCAN1 (ENSCWAG00000003081) KCNE1 (ENSCWAG00000003072) SMIM34 (ENSCWAG00000003064) ENSCWAG00000003061 #22 C21orf140 (ENSCWAG00000003054) SMIM11 (ENSCWAG00000003045) KCNE2 (ENSCWAG00000003038) MRPS6 (ENSCWAG00000003022) ATP5PO (ENSCWAG00000002999) ITSN1 (ENSCWAG00000002936) CRYZL1 (ENSCWAG00000002883) DONSON (ENSCWAG00000002852) ENSCWAG00000002805 GART (ENSCWAG00000002777) DNAJC28 (ENSCWAG00000002771) ENSCWAG00000002767 TMEM50B (ENSCWAG00000002753) IFNGR2 (ENSCWAG00000002734) IFNAR1 (ENSCWAG00000002719) Artiodactyla_a ANCESTRAL SPECIES 17 ENSGT00940000160018 ENSGT00390000002259 ENSGT00390000002575 ENSGT00940000153654 ENSGT00950000183203.d.h ENSGT00940000159978 ENSGT00390000009363 ENSGT00550000074798.a.a ENSGT00940000158664 ENSGT00950000182843.a.b ENSGT00820000127055.b ENSGT00940000160448 ENSGT00940000158190 ENSGT00730000111394.n.b ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.d #22 ENSGT00730000111394.m ENSGT00940000154297.B ENSGT01020000230351.F ENSGT00940000154637 ENSGT00950000182825.B ENSGT00390000014845 ENSGT00390000006044 ENSGT00390000007249 ENSGT00730000111140 ENSGT00940000159598 ENSGT00950000183101.b ENSGT00940000163677.a.b.a.a.a.a ENSGT00940000162000.d ENSGT00940000162972 ENSGT00390000017655 Camelidae ANCESTRAL SPECIES 27 ENSGT01050000244890.a.b.b ENSGT00940000153993.B ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT00940000159962 ENSGT00930000150980.b ENSGT00940000162031 ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00390000012132 ENSGT00940000160203 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.d #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.b.b ENSGT00390000007809.a ENSGT00940000161132 ENSGT00940000161665 ENSGT00940000156707 ENSGT00950000183019.f.b.a.t ENSGT00390000016495 ENSGT00940000160329 ENSGT00940000160653 ENSGT00950000183080.a.a ENSGT00940000159521 ENSGT00940000153804.B ENSGT00940000158666 ENSGT00940000155606.b Alpaca MODERN SPECIES 2737 ENSVPAG00000006087 #17 ANKZF1 (ENSVPAG00000006089) #18 GLB1L (ENSVPAG00000006090) #19 STK16 (ENSVPAG00000006091) #20 ENSVPAG00000006094 TUBA4B (ENSVPAG00000006096) #22 ENSVPAG00000006097 #23 ENSVPAG00000006099 #24 ENSVPAG00000006100 #25 DNPEP (ENSVPAG00000006102) #26 ENSVPAG00000006103 #27 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Cetacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Odontoceti ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Odontoceti_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Monodontidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Narwhal MODERN SPECIES 299 ENSMMNG00015011920 ENSMMNG00015011901 GSG1L (ENSMMNG00015011861) KATNIP (ENSMMNG00015011757) GTF3C1 (ENSMMNG00015011604) IL21R (ENSMMNG00015011559) IL4R (ENSMMNG00015011525) NSMCE1 (ENSMMNG00015011498) KDM8 (ENSMMNG00015011485) HS3ST4 (ENSMMNG00015011467) ENSMMNG00015011458 ZKSCAN2 (ENSMMNG00015011430) AQP8 (ENSMMNG00015011418) LCMT1 (ENSMMNG00015011334) ENSMMNG00015011313 ENSMMNG00015011305 #22 ARHGAP17 (ENSMMNG00015011130) SLC5A11 (ENSMMNG00015010968) TNRC6A (ENSMMNG00015010837) RBBP6 (ENSMMNG00015010660) CACNG3 (ENSMMNG00015010605) PRKCB (ENSMMNG00015010562) CHP2 (ENSMMNG00015010523) ERN2 (ENSMMNG00015010432) PLK1 (ENSMMNG00015010378) DCTN5 (ENSMMNG00015010352) PALB2 (ENSMMNG00015010324) NDUFAB1 (ENSMMNG00015010313) ENSMMNG00015010305 UBFD1 (ENSMMNG00015010282) ENSMMNG00015010261 Pecora ANCESTRAL SPECIES ENSGT00940000154457.a.a.d #22 Yarkand deer MODERN SPECIES 8 ENSCHYG00000017114 UGDH (ENSCHYG00000016766) ENSCHYG00000015244 RPL9 (ENSCHYG00000014866) ENSCHYG00000014844 KLB (ENSCHYG00000014744) RFC1 (ENSCHYG00000014461) WDR19 (ENSCHYG00000013487) KLHL5 (ENSCHYG00000012983) TMEM156 (ENSCHYG00000012866) FAM114A1 (ENSCHYG00000012688) TLR6 (ENSCHYG00000012665) TLR1 (ENSCHYG00000012651) TLR10 (ENSCHYG00000012632) KLF3 (ENSCHYG00000012587) ENSCHYG00000012569 #22 ENSCHYG00000012545 TBC1D1 (ENSCHYG00000011548) PGM2 (ENSCHYG00000011452) ENSCHYG00000011389 RELL1 (ENSCHYG00000011263) C4orf19 (ENSCHYG00000011230) NWD2 (ENSCHYG00000011104) DTHD1 (ENSCHYG00000010657) ARAP2 (ENSCHYG00000009613) ENSCHYG00000009498 PCDH7 (ENSCHYG00000009443) ENSCHYG00000009369 ENSCHYG00000009335 STIM2 (ENSCHYG00000009144) ENSCHYG00000009099 Laurasiatheria_a DUPLICATION Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Cetacea ANCESTRAL SPECIES 8 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a.t ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc ENSGT00940000154457.a.a.c.a ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000162031 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000153993.B ENSGT01050000244890.a.b.b Odontoceti ANCESTRAL SPECIES 7 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a.t ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc ENSGT00940000154457.a.a.c.a ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000012136 ENSGT00730000111429.b ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000162031 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000153993.B Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a.t ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc ENSGT00940000154457.a.a.c.a ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.bc.b ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000012136 ENSGT00730000111429.b ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000162031 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000153993.B Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a.t ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc ENSGT00900000143450 ENSGT00940000154457.a.a.c.a ##22 ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00730000111429.b ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000162031 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000153993.B ENSGT01050000244890.a.b.b ENSGT00940000160612.d Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a.t ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.cc ENSGT00900000143450 ENSGT00940000154457.a.a.c.a ##22 ENSGT01010000229521 ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000162031 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000153993.B ENSGT01050000244890.a.b.b ENSGT00940000160612.d Narwhal MODERN SPECIES 313 RND1 (ENSMMNG00015021382) CCDC65 (ENSMMNG00015021403) FKBP11 (ENSMMNG00015021421) ARF3 (ENSMMNG00015021435) WNT10B (ENSMMNG00015021457) WNT1 (ENSMMNG00015021481) DDN (ENSMMNG00015021490) PRKAG1 (ENSMMNG00015021509) KMT2D (ENSMMNG00015021547) RHEBL1 (ENSMMNG00015021596) DHH (ENSMMNG00015021606) LMBR1L (ENSMMNG00015021626) TUBA1B (ENSMMNG00015021671) ENSMMNG00015021709 ENSMMNG00015021713 ENSMMNG00015021728 ##22 ENSMMNG00015021733 PRPH (ENSMMNG00015013461) TROAP (ENSMMNG00015013490) C1QL4 (ENSMMNG00015013515) SPATS2 (ENSMMNG00015013537) KCNH3 (ENSMMNG00015013644) MCRS1 (ENSMMNG00015013696) PRPF40B (ENSMMNG00015013762) FMNL3 (ENSMMNG00015013853) TMBIM6 (ENSMMNG00015013952) NCKAP5L (ENSMMNG00015013977) BCDIN3D (ENSMMNG00015013997) FAIM2 (ENSMMNG00015014009) AQP2 (ENSMMNG00015014027) AQP5 (ENSMMNG00015014040) Beluga whale MODERN SPECIES 39 RND1 (ENSDLEG00000005740) CCDC65 (ENSDLEG00000005725) FKBP11 (ENSDLEG00000005706) ARF3 (ENSDLEG00000005695) WNT10B (ENSDLEG00000005685) WNT1 (ENSDLEG00000005671) DDN (ENSDLEG00000005658) PRKAG1 (ENSDLEG00000005643) ENSDLEG00000005622 RHEBL1 (ENSDLEG00000005603) DHH (ENSDLEG00000005560) LMBR1L (ENSDLEG00000005547) ENSDLEG00000005539 ENSDLEG00000005535 ENSDLEG00000005525 ENSDLEG00000005507 ##22 ENSDLEG00000005499 PRPH (ENSDLEG00000005489) TROAP (ENSDLEG00000005478) C1QL4 (ENSDLEG00000005472) SPATS2 (ENSDLEG00000016468) KCNH3 (ENSDLEG00000016437) MCRS1 (ENSDLEG00000016407) FAM186B (ENSDLEG00000016369) PRPF40B (ENSDLEG00000016312) FMNL3 (ENSDLEG00000016175) TMBIM6 (ENSDLEG00000016148) NCKAP5L (ENSDLEG00000016120) BCDIN3D (ENSDLEG00000016113) FAIM2 (ENSDLEG00000016092) AQP2 (ENSDLEG00000016070) Vaquita MODERN SPECIES 1 DDX23 (ENSPSNG00000012273) RND1 (ENSPSNG00000012213) CCDC65 (ENSPSNG00000012176) FKBP11 (ENSPSNG00000012091) ARF3 (ENSPSNG00000011993) WNT10B (ENSPSNG00000011881) DDN (ENSPSNG00000011626) ENSPSNG00000011515 KMT2D (ENSPSNG00000011440) RHEBL1 (ENSPSNG00000011379) DHH (ENSPSNG00000011320) LMBR1L (ENSPSNG00000011226) TUBA1B (ENSPSNG00000011161) KLHL8 (ENSPSNG00000011123) TUBA1A (ENSPSNG00000010994) ENSPSNG00000010933 ##22 PRPH (ENSPSNG00000010814) TROAP (ENSPSNG00000010746) C1QL4 (ENSPSNG00000010701) ENSPSNG00000010655 SPATS2 (ENSPSNG00000010631) KCNH3 (ENSPSNG00000010468) MCRS1 (ENSPSNG00000010283) FAM186B (ENSPSNG00000010181) PRPF40B (ENSPSNG00000009876) FMNL3 (ENSPSNG00000009775) TMBIM6 (ENSPSNG00000009712) ENSPSNG00000011171 NCKAP5L (ENSPSNG00000011101) BCDIN3D (ENSPSNG00000011042) FAIM2 (ENSPSNG00000010923) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Carnivora ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Caniformia ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Mustelinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.a ##22 Ferret MODERN SPECIES 224 DDX60 (ENSMPUG00000007710) PALLD (ENSMPUG00000007693) CBR4 (ENSMPUG00000007659) ENSMPUG00000007642 SH3RF1 (ENSMPUG00000007630) NEK1 (ENSMPUG00000007612) CLCN3 (ENSMPUG00000007601) HPF1 (ENSMPUG00000007542) ENSMPUG00000007531 ##22 MFAP3L (ENSMPUG00000007527) TRIM2 (ENSMPUG00000007517) FHDC1 (ENSMPUG00000007505) ARFIP1 (ENSMPUG00000007441) TIGD4 (ENSMPUG00000019997) TMEM154 (ENSMPUG00000007425) ENSMPUG00000007417 FBXW7 (ENSMPUG00000007404) GATB (ENSMPUG00000007394) FHIP1A (ENSMPUG00000007380) PRSS48 (ENSMPUG00000007310) ENSMPUG00000007291 SH3D19 (ENSMPUG00000007143) ENSMPUG00000019994 RPS3A (ENSMPUG00000007139) Laurasiatheria_a ANCESTRAL SPECIES 16 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Artiodactyla ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00950000182825.A.a.b.b ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Artiodactyla_a ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00950000182825.A.a.b.b ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Artiodactyla_b ANCESTRAL SPECIES 12 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00950000182825.A.a.b.b ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Cetacea ANCESTRAL SPECIES 14 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Odontoceti ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Odontoceti_a ANCESTRAL SPECIES 10 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Odontoceti_b ANCESTRAL SPECIES 12 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Monodontidae ANCESTRAL SPECIES 10 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00990000213068 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Beluga whale MODERN SPECIES 84 FEV (ENSDLEG00000018865) #7 CRYBA2 (ENSDLEG00000018870) #8 CFAP65 (ENSDLEG00000018889) #9 IHH (ENSDLEG00000018943) #10 NHEJ1 (ENSDLEG00000018950) #11 SLC23A3 (ENSDLEG00000018960) #12 CNPPD1 (ENSDLEG00000018979) #13 RETREG2 (ENSDLEG00000018990) #14 ZFAND2B (ENSDLEG00000018999) #15 ABCB6 (ENSDLEG00000019026) #16 ATG9A (ENSDLEG00000019049) #17 ENSDLEG00000019057 GLB1L (ENSDLEG00000019064) #19 STK16 (ENSDLEG00000019079) #20 TUBA4A (ENSDLEG00000019091) #21 ENSDLEG00000019101 ##22 DNAJB2 (ENSDLEG00000019116) #23 PTPRN (ENSDLEG00000019144) #24 ENSDLEG00000019179 #25 DNPEP (ENSDLEG00000019188) #26 DES (ENSDLEG00000019212) #27 SPEG (ENSDLEG00000019259) #28 ENSDLEG00000019431 #29 GMPPA (ENSDLEG00000019436) #32 ENSDLEG00000019449 #31 ASIC4 (ENSDLEG00000019454) #33 CHPF (ENSDLEG00000019490) #34 TMEM198 (ENSDLEG00000019495) #35 OBSL1 (ENSDLEG00000019527) #36 INHA (ENSDLEG00000019767) #37 STK11IP (ENSDLEG00000019774) Narwhal MODERN SPECIES 302 CRYBA2 (ENSMMNG00015005549) #8 CFAP65 (ENSMMNG00015005484) #9 IHH (ENSMMNG00015005455) #10 NHEJ1 (ENSMMNG00015005440) #11 SLC23A3 (ENSMMNG00015005390) #12 CNPPD1 (ENSMMNG00015005357) #13 RETREG2 (ENSMMNG00015005333) #14 ZFAND2B (ENSMMNG00015005310) #15 ABCB6 (ENSMMNG00015005232) #16 ATG9A (ENSMMNG00015005188) #17 ENSMMNG00015005174 ENSMMNG00015005169 GLB1L (ENSMMNG00015005156) #19 STK16 (ENSMMNG00015005125) #20 TUBA4A (ENSMMNG00015005098) #21 ENSMMNG00015005074 ##22 DNAJB2 (ENSMMNG00015005054) #23 PTPRN (ENSMMNG00015005014) #24 ENSMMNG00015005001 #25 DNPEP (ENSMMNG00015004941) #26 DES (ENSMMNG00015004930) #27 SPEG (ENSMMNG00015004899) #28 ENSMMNG00015004889 #29 SPEGNB (ENSMMNG00015004883) #30 ENSMMNG00015004876 #31 GMPPA (ENSMMNG00015004864) #32 ASIC4 (ENSMMNG00015004853) #33 CHPF (ENSMMNG00015004846) #34 TMEM198 (ENSMMNG00015004843) #35 OBSL1 (ENSMMNG00015013744) #36 INHA (ENSMMNG00015013722) #37 Vaquita MODERN SPECIES 18 FEV (ENSPSNG00000011170) #7 CRYBA2 (ENSPSNG00000011122) #8 CFAP65 (ENSPSNG00000010593) #9 IHH (ENSPSNG00000010524) #10 NHEJ1 (ENSPSNG00000010446) #11 SLC23A3 (ENSPSNG00000010037) #12 CNPPD1 (ENSPSNG00000009927) #13 RETREG2 (ENSPSNG00000009864) #14 ZFAND2B (ENSPSNG00000009774) #15 ABCB6 (ENSPSNG00000009668) #16 ATG9A (ENSPSNG00000019260) #17 ENSPSNG00000019067 #18 GLB1L (ENSPSNG00000018947) #19 STK16 (ENSPSNG00000018746) #20 TUBA4A (ENSPSNG00000018656) #21 ENSPSNG00000018557 ##22 DNAJB2 (ENSPSNG00000018371) #23 PTPRN (ENSPSNG00000018163) #24 ENSPSNG00000018060 #25 DNPEP (ENSPSNG00000017851) #26 DES (ENSPSNG00000017779) #27 SPEG (ENSPSNG00000017280) #28 ENSPSNG00000017220 #29 SPEGNB (ENSPSNG00000017168) #30 ENSPSNG00000017117 #31 GMPPA (ENSPSNG00000017045) #32 ASIC4 (ENSPSNG00000016724) #33 CHPF (ENSPSNG00000016627) #34 TMEM198 (ENSPSNG00000016579) #35 OBSL1 (ENSPSNG00000016426) #36 INHA (ENSPSNG00000016336) #37 Sperm whale MODERN SPECIES 11 FARSB (ENSPCTG00005008554) SGPP2 (ENSPCTG00005008511) PAX3 (ENSPCTG00005020959) ENSPCTG00005020914 EPHA4 (ENSPCTG00005020771) STK11IP (ENSPCTG00005020749) ENSPCTG00005020725 #31 GMPPA (ENSPCTG00005020686) #32 ENSPCTG00005020674 #29 SPEGNB (ENSPCTG00005020639) #30 SPEG (ENSPCTG00005020396) #28 RETREG2 (ENSPCTG00005020360) #14 CNPPD1 (ENSPCTG00005020329) #13 SLC23A3 (ENSPCTG00005020177) #12 TUBA4A (ENSPCTG00005020138) #21 ENSPCTG00005020056 ##22 DNAJB2 (ENSPCTG00005019868) #23 PTPRN (ENSPCTG00005019662) #24 ENSPCTG00005019597 #25 ENSPCTG00005019578 IHH (ENSPCTG00005019553) #10 CFAP65 (ENSPCTG00005019150) #9 CRYBA2 (ENSPCTG00005019097) #8 FEV (ENSPCTG00005019061) #7 CDK5R2 (ENSPCTG00005019049) WNT10A (ENSPCTG00005019019) WNT6 (ENSPCTG00005018979) ENSPCTG00005018949 TTLL4 (ENSPCTG00005018815) STK36 (ENSPCTG00005018735) RNF25 (ENSPCTG00005018698) Suina ANCESTRAL SPECIES 3 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Pig MODERN SPECIES 6 FEV (ENSSSCG00000035988) #7 CRYBA2 (ENSSSCG00000040776) #8 CFAP65 (ENSSSCG00000016203) #9 IHH (ENSSSCG00000016204) #10 NHEJ1 (ENSSSCG00000016205) #11 SLC23A3 (ENSSSCG00000029694) #12 CNPPD1 (ENSSSCG00000016206) #13 RETREG2 (ENSSSCG00000016207) #14 ZFAND2B (ENSSSCG00000016208) #15 ABCB6 (ENSSSCG00000016210) #16 ATG9A (ENSSSCG00000016211) #17 ANKZF1 (ENSSSCG00000016212) #18 GLB1L (ENSSSCG00000016213) #19 STK16 (ENSSSCG00000016214) #20 TUBA4A (ENSSSCG00000016216) #21 ENSSSCG00000016215 ##22 DNAJB2 (ENSSSCG00000016217) #23 PTPRN (ENSSSCG00000016218) #24 ENSSSCG00000016219 #25 DNPEP (ENSSSCG00000016220) #26 DES (ENSSSCG00000020785) #27 ENSSSCG00000032522 #28 SPEGNB (ENSSSCG00000032289) #30 ENSSSCG00000063534 GMPPA (ENSSSCG00000023935) #32 ENSSSCG00000031491 #31 ASIC4 (ENSSSCG00000029968) #33 CHPF (ENSSSCG00000021610) #34 TMEM198 (ENSSSCG00000027541) #35 OBSL1 (ENSSSCG00000028052) #36 INHA (ENSSSCG00000020771) #37 Laurasiatheria_b ANCESTRAL SPECIES 16 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Carnivora ANCESTRAL SPECIES 17 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Caniformia ANCESTRAL SPECIES 14 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Caniformia_b ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Ursidae ANCESTRAL SPECIES 7 ENSGT00940000161562 #7 ENSGT00940000160306.b #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT01070000253857 #31 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Ursus ANCESTRAL SPECIES 12 ENSGT00940000161562 #7 ENSGT00940000160306.b #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT01070000253857 #31 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 American black bear MODERN SPECIES 4098 NHEJ1 (ENSUAMG00000006916) #11 SLC23A3 (ENSUAMG00000006917) #12 CNPPD1 (ENSUAMG00000006919) #13 RETREG2 (ENSUAMG00000006922) #14 ZFAND2B (ENSUAMG00000006924) #15 ABCB6 (ENSUAMG00000006930) #16 ATG9A (ENSUAMG00000007415) #17 ANKZF1 (ENSUAMG00000007442) #18 GLB1L (ENSUAMG00000007611) #19 STK16 (ENSUAMG00000009024) #20 TUBA4A (ENSUAMG00000009026) #21 ENSUAMG00000009028 ##22 DNAJB2 (ENSUAMG00000009086) #23 PTPRN (ENSUAMG00000009095) #24 ENSUAMG00000009100 #25 Polar bear MODERN SPECIES 169 ENSUMAG00000019064 CRYBA2 (ENSUMAG00000019060) #8 CFAP65 (ENSUMAG00000019016) #9 ENSUMAG00000019009 #10 NHEJ1 (ENSUMAG00000019002) #11 SLC23A3 (ENSUMAG00000018986) #12 CNPPD1 (ENSUMAG00000018974) #13 RETREG2 (ENSUMAG00000018947) #14 ZFAND2B (ENSUMAG00000018934) #15 ABCB6 (ENSUMAG00000018819) #16 ATG9A (ENSUMAG00000018800) #17 ANKZF1 (ENSUMAG00000018788) #18 GLB1L (ENSUMAG00000018776) #19 STK16 (ENSUMAG00000018767) #20 TUBA4A (ENSUMAG00000018763) #21 ENSUMAG00000018744 ##22 DNAJB2 (ENSUMAG00000018736) #23 PTPRN (ENSUMAG00000018692) #24 RESP18 (ENSUMAG00000018683) #25 DNPEP (ENSUMAG00000018583) #26 DES (ENSUMAG00000018525) #27 ENSUMAG00000018511 #28 ENSUMAG00000018493 #29 SPEGNB (ENSUMAG00000018490) #30 ENSUMAG00000018486 #31 GMPPA (ENSUMAG00000018291) #32 ASIC4 (ENSUMAG00000018256) #33 TMEM198 (ENSUMAG00000018249) #35 OBSL1 (ENSUMAG00000018229) #36 INHA (ENSUMAG00000018222) #37 STK11IP (ENSUMAG00000018159) Giant Panda MODERN SPECIES 11 WNT10A (ENSAMEG00000002646) FEV (ENSAMEG00000002639) #7 CRYBA2 (ENSAMEG00000002615) #8 CFAP65 (ENSAMEG00000002575) #9 IHH (ENSAMEG00000027416) #10 NHEJ1 (ENSAMEG00000002562) #11 SLC23A3 (ENSAMEG00000002538) #12 ENSAMEG00000002494 ABCB6 (ENSAMEG00000002427) #16 ZFAND2B (ENSAMEG00000002464) #15 ATG9A (ENSAMEG00000002386) #17 ANKZF1 (ENSAMEG00000002362) #18 GLB1L (ENSAMEG00000002329) #19 STK16 (ENSAMEG00000002308) #20 TUBA4A (ENSAMEG00000028540) #21 ENSAMEG00000027535 ##22 DNAJB2 (ENSAMEG00000016755) #23 PTPRN (ENSAMEG00000016757) #24 DNPEP (ENSAMEG00000016794) #26 DES (ENSAMEG00000016801) #27 SPEG (ENSAMEG00000016742) #28 SPEGNB (ENSAMEG00000031347) #30 GMPPA (ENSAMEG00000016830) #32 ENSAMEG00000029204 #31 CHPF (ENSAMEG00000016862) #34 TMEM198 (ENSAMEG00000016867) #35 ENSAMEG00000016871 #36 INHA (ENSAMEG00000016879) #37 STK11IP (ENSAMEG00000016882) ENSAMEG00000019242 SLC4A3 (ENSAMEG00000016909) Canidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.c.b ##22 Red fox MODERN SPECIES 39 CRYBA2 (ENSVVUG00000000927) #8 CFAP65 (ENSVVUG00000000403) #9 IHH (ENSVVUG00000000214) #10 ENSVVUG00000000136 NHEJ1 (ENSVVUG00000025797) #11 SLC23A3 (ENSVVUG00000025794) #12 CNPPD1 (ENSVVUG00000025793) #13 RETREG2 (ENSVVUG00000025791) #14 ZFAND2B (ENSVVUG00000025788) #15 ABCB6 (ENSVVUG00000025784) #16 ATG9A (ENSVVUG00000025782) #17 ANKZF1 (ENSVVUG00000025776) #18 GLB1L (ENSVVUG00000025774) #19 STK16 (ENSVVUG00000025772) #20 TUBA4A (ENSVVUG00000025771) #21 ENSVVUG00000025770 ##22 DNAJB2 (ENSVVUG00000025769) #23 PTPRN (ENSVVUG00000025767) #24 ENSVVUG00000025766 #25 DNPEP (ENSVVUG00000025750) #26 DES (ENSVVUG00000025746) #27 ENSVVUG00000025742 #28 ENSVVUG00000025739 #29 SPEGNB (ENSVVUG00000025738) #30 ENSVVUG00000025736 #31 GMPPA (ENSVVUG00000025732) #32 ASIC4 (ENSVVUG00000025729) #33 CHPF (ENSVVUG00000025727) #34 TMEM198 (ENSVVUG00000025722) #35 ENSVVUG00000025718 #36 INHA (ENSVVUG00000025711) #37 Laurasiatheria_c ANCESTRAL SPECIES 18 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Equus ANCESTRAL SPECIES 51 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 ENSGT00940000158471 ENSGT00940000159765 Horse MODERN SPECIES 27 CDK5R2 (ENSECAG00000006781) FEV (ENSECAG00000016026) #7 CRYBA2 (ENSECAG00000015100) #8 CFAP65 (ENSECAG00000019457) #9 IHH (ENSECAG00000003802) #10 NHEJ1 (ENSECAG00000030989) #11 CNPPD1 (ENSECAG00000010050) #13 RETREG2 (ENSECAG00000013944) #14 ZFAND2B (ENSECAG00000014958) #15 ABCB6 (ENSECAG00000016378) #16 ATG9A (ENSECAG00000007801) #17 ANKZF1 (ENSECAG00000016473) #18 GLB1L (ENSECAG00000003253) #19 STK16 (ENSECAG00000014093) #20 TUBA4A (ENSECAG00000033788) #21 ENSECAG00000030595 ##22 DNAJB2 (ENSECAG00000022076) #23 PTPRN (ENSECAG00000005468) #24 ENSECAG00000047913 #25 DNPEP (ENSECAG00000021601) #26 DES (ENSECAG00000013832) #27 SPEG (ENSECAG00000000174) #28 ENSECAG00000031276 #29 GMPPA (ENSECAG00000011565) #32 ASIC4 (ENSECAG00000019427) #33 TMEM198 (ENSECAG00000008352) #35 CHPF (ENSECAG00000000516) #34 OBSL1 (ENSECAG00000009352) #36 INHA (ENSECAG00000015864) #37 STK11IP (ENSECAG00000017116) SLC4A3 (ENSECAG00000010982) Chiroptera ANCESTRAL SPECIES 11 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000154457.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Microchiroptera ANCESTRAL SPECIES 15 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00990000213248 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.c.b ##22 ENSGT00940000154457.b ##22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01070000253857 #31 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Microbat DUPLICATION Microbat MODERN SPECIES 940 CRYBA2 (ENSMLUG00000011404) #8 CFAP65 (ENSMLUG00000011424) #9 IHH (ENSMLUG00000011503) #10 ENSMLUG00000026660 NHEJ1 (ENSMLUG00000024087) #11 SLC23A3 (ENSMLUG00000011517) #12 CNPPD1 (ENSMLUG00000023687) #13 RETREG2 (ENSMLUG00000022407) #14 ZFAND2B (ENSMLUG00000007983) #15 ABCB6 (ENSMLUG00000029153) #16 ENSMLUG00000008013 #17 ANKZF1 (ENSMLUG00000008036) #18 GLB1L (ENSMLUG00000023103) #19 STK16 (ENSMLUG00000008066) #20 TUBA4A (ENSMLUG00000008082) #21 ENSMLUG00000015526 ##22 CHPF (ENSMLUG00000010340) #34 DNAJB2 (ENSMLUG00000008099) #23 PTPRN (ENSMLUG00000008123) #24 DNPEP (ENSMLUG00000010171) #26 DES (ENSMLUG00000010209) #27 SPEG (ENSMLUG00000010235) #28 GMPPA (ENSMLUG00000027974) #32 ASIC4 (ENSMLUG00000010308) #33 TMEM198 (ENSMLUG00000028778) #35 ENSMLUG00000010348 #36 SLC4A3 (ENSMLUG00000010450) EPHA4 (ENSMLUG00000015777) PAX3 (ENSMLUG00000014155) SGPP2 (ENSMLUG00000010880) FARSB (ENSMLUG00000010904) Microbat MODERN SPECIES 1843 PRRC2C (ENSMLUG00000016744) ENSMLUG00000028994 ##22 ENSMLUG00000024501 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Common shrew MODERN SPECIES 4345 TUBA4B (ENSSARG00000000861) #22 Euarchontoglires ANCESTRAL SPECIES 14 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT01040000242059 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01080000257504 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Euarchontoglires_A ANCESTRAL SPECIES 13 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT01040000242059 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Glires ANCESTRAL SPECIES 14 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT01040000242059 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Lagomorpha ANCESTRAL SPECIES 81 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a.k ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000162031 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000153993.B ENSGT01050000244890.a.b.b ENSGT00940000160612.d Pika DUPLICATION Pika DUPLICATION Pika MODERN SPECIES 3108 ENSOPRG00000015039 C1QL4 (ENSOPRG00000015033) ENSOPRG00000014992 ENSOPRG00000014971 ENSOPRG00000014959 #22 ENSOPRG00000014947 #22 Pika MODERN SPECIES 3108 ENSOPRG00000014947 #22 ENSOPRG00000014959 #22 ENSOPRG00000014971 ENSOPRG00000014992 C1QL4 (ENSOPRG00000015033) ENSOPRG00000015039 Pika MODERN SPECIES 6371 ENSOPRG00000018178 #22 Pika MODERN SPECIES 7336 ENSOPRG00000014803 #22 Rodentia ANCESTRAL SPECIES 14 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT01040000242059 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Rodentia_B ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Kangaroo rat MODERN SPECIES 361 Bcdin3d (ENSDORG00000025460) Nckap5l (ENSDORG00000004822) ENSDORG00000001282 Fmnl3 (ENSDORG00000000273) Prpf40b (ENSDORG00000000269) Fam186b (ENSDORG00000027101) Mcrs1 (ENSDORG00000011996) Kcnh3 (ENSDORG00000011997) Spats2 (ENSDORG00000030123) Dnajc22 (ENSDORG00000008232) C1ql4 (ENSDORG00000008234) Troap (ENSDORG00000008235) Prph (ENSDORG00000004920) Tuba1c (ENSDORG00000015065) Tuba1a (ENSDORG00000006812) ENSDORG00000000156 #22 ENSDORG00000008221 Dhh (ENSDORG00000024818) Rhebl1 (ENSDORG00000006513) ENSDORG00000027776 ENSDORG00000024758 Prkag1 (ENSDORG00000006505) Ddn (ENSDORG00000028862) Wnt1 (ENSDORG00000007735) Wnt10b (ENSDORG00000010403) Arf3 (ENSDORG00000024681) Ccdc65 (ENSDORG00000012748) Rnd1 (ENSDORG00000023400) Ddx23 (ENSDORG00000012659) Cacnb3 (ENSDORG00000012657) Adcy6 (ENSDORG00000005171) Myomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Muroidea ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Muroidea_A ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Cricetidae ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Northern American deer mouse MODERN SPECIES 6 ENSPEMG00000014664 #22 Erap1 (ENSPEMG00000018353) Cast (ENSPEMG00000012449) Pcsk1 (ENSPEMG00000006609) Ell2 (ENSPEMG00000015646) Glrx (ENSPEMG00000017750) Rhobtb3 (ENSPEMG00000011890) Spata9 (ENSPEMG00000011197) Rfesd (ENSPEMG00000014127) Gpr150 (ENSPEMG00000000751) Arsk (ENSPEMG00000014304) Skic3 (ENSPEMG00000018623) Fam81b (ENSPEMG00000020666) Mctp1 (ENSPEMG00000014096) Slf1 (ENSPEMG00000022525) 2210408I21Rik (ENSPEMG00000008563) Cricetinae ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Chinese hamster chok1gshd MODERN SPECIES 76 Rasgef1b (ENSCGRG00001019748) Prkg2 (ENSCGRG00001021769) Bmp3 (ENSCGRG00001013590) ENSCGRG00001002838 Cfap299 (ENSCGRG00001005694) Fgf5 (ENSCGRG00001014809) Prdm8 (ENSCGRG00001011271) Antxr2 (ENSCGRG00001004640) Gk2 (ENSCGRG00001001900) Naa11 (ENSCGRG00001001343) Paqr3 (ENSCGRG00001013078) Bmp2k (ENSCGRG00001009725) Anxa3 (ENSCGRG00001015457) Fras1 (ENSCGRG00001010821) ENSCGRG00001005376 ENSCGRG00001002514 #22 ENSCGRG00001021246 Cnot6l (ENSCGRG00001022099) Cxcl13 (ENSCGRG00001021479) ENSCGRG00001018445 ENSCGRG00001000219 ENSCGRG00001021211 Ccng2 (ENSCGRG00001000047) Ccni (ENSCGRG00001019404) Septin11 (ENSCGRG00001000184) Shroom3 (ENSCGRG00001013324) Ccdc158 (ENSCGRG00001020351) Stbd1 (ENSCGRG00001011602) Fam47e (ENSCGRG00001000514) Scarb2 (ENSCGRG00001014787) Nup54 (ENSCGRG00001019949) Rodentia_A ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Sciuridae ANCESTRAL SPECIES 10 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Eurasian red squirrel MODERN SPECIES 12 CRYBA2 (ENSSVLG00005014007) #8 CFAP65 (ENSSVLG00005014142) #9 IHH (ENSSVLG00005014629) #10 NHEJ1 (ENSSVLG00005014689) #11 ENSSVLG00005014735 SLC23A3 (ENSSVLG00005014807) #12 CNPPD1 (ENSSVLG00005015098) #13 ENSSVLG00005015144 ZFAND2B (ENSSVLG00005015187) #15 ABCB6 (ENSSVLG00005015299) #16 ATG9A (ENSSVLG00005015521) #17 ANKZF1 (ENSSVLG00005015600) #18 GLB1L (ENSSVLG00005015724) #19 STK16 (ENSSVLG00005015849) #20 TUBA4A (ENSSVLG00005016017) #21 ENSSVLG00005016074 #22 DNAJB2 (ENSSVLG00005016147) #23 PTPRN (ENSSVLG00005016237) #24 ENSSVLG00005016794 #25 ENSSVLG00005016836 DNPEP (ENSSVLG00005016888) #26 DES (ENSSVLG00005017173) #27 SPEG (ENSSVLG00005017279) #28 SPEGNB (ENSSVLG00005017796) #30 ENSSVLG00005017859 #29 GMPPA (ENSSVLG00005017884) #32 ENSSVLG00005017975 ASIC4 (ENSSVLG00005018052) #33 CHPF (ENSSVLG00005018279) #34 TMEM198 (ENSSVLG00005018351) #35 OBSL1 (ENSSVLG00005018410) #36 Marmotini ANCESTRAL SPECIES 2 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 ENSGT00940000158471 Alpin marmot DUPLICATION Alpin marmot MODERN SPECIES 8 FEV (ENSMMMG00000019852) #7 CRYBA2 (ENSMMMG00000019854) #8 CFAP65 (ENSMMMG00000019864) #9 IHH (ENSMMMG00000019944) #10 NHEJ1 (ENSMMMG00000019945) #11 SLC23A3 (ENSMMMG00000019955) #12 CNPPD1 (ENSMMMG00000019961) #13 RETREG2 (ENSMMMG00000019980) #14 ZFAND2B (ENSMMMG00000019993) #15 ABCB6 (ENSMMMG00000020000) #16 ATG9A (ENSMMMG00000020023) #17 ANKZF1 (ENSMMMG00000020070) #18 GLB1L (ENSMMMG00000020077) #19 STK16 (ENSMMMG00000020447) #20 TUBA4A (ENSMMMG00000020450) #21 ENSMMMG00000020453 #22 DNAJB2 (ENSMMMG00000020507) #23 PTPRN (ENSMMMG00000020552) #24 ENSMMMG00000020661 #25 DNPEP (ENSMMMG00000020675) #26 DES (ENSMMMG00000020720) #27 ENSMMMG00000020764 #28 ENSMMMG00000020788 GMPPA (ENSMMMG00000020792) #32 ENSMMMG00000020798 #31 ASIC4 (ENSMMMG00000020805) #33 CHPF (ENSMMMG00000020826) #34 TMEM198 (ENSMMMG00000020837) #35 ENSMMMG00000020857 #36 ENSMMMG00000020865 #36 INHA (ENSMMMG00000020884) #37 Alpin marmot MODERN SPECIES 5 ENSMMMG00000021196 THSD7B (ENSMMMG00000021210) HNMT (ENSMMMG00000021232) SPOPL (ENSMMMG00000021248) NXPH2 (ENSMMMG00000021251) LRP1B (ENSMMMG00000021313) KYNU (ENSMMMG00000021410) ARHGAP15 (ENSMMMG00000021442) ENSMMMG00000021461 GTDC1 (ENSMMMG00000021476) ZEB2 (ENSMMMG00000021492) ACVR2A (ENSMMMG00000021587) ENSMMMG00000021598 ENSMMMG00000021615 ENSMMMG00000021626 ENSMMMG00000021627 #22 EPC2 (ENSMMMG00000021637) ENSMMMG00000021646 KIF5C (ENSMMMG00000021654) LYPD6B (ENSMMMG00000021702) LYPD6 (ENSMMMG00000021723) MMADHC (ENSMMMG00000021733) RND3 (ENSMMMG00000021746) ENSMMMG00000021752 ENSMMMG00000021771 ENSMMMG00000021776 ENSMMMG00000021801 RBM43 (ENSMMMG00000021824) NMI (ENSMMMG00000021825) ENSMMMG00000021827 TNFAIP6 (ENSMMMG00000021834) Marmotini_b ANCESTRAL SPECIES 71 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 ENSGT00940000158471 Squirrel MODERN SPECIES 169 CRYBA2 (ENSSTOG00000009326) #8 ENSSTOG00000009331 #9 IHH (ENSSTOG00000027440) #10 NHEJ1 (ENSSTOG00000022820) #11 SLC23A3 (ENSSTOG00000009384) #12 CNPPD1 (ENSSTOG00000009401) #13 RETREG2 (ENSSTOG00000025849) #14 ZFAND2B (ENSSTOG00000011063) #15 ABCB6 (ENSSTOG00000011066) #16 ATG9A (ENSSTOG00000023078) #17 ENSSTOG00000030606 #18 GLB1L (ENSSTOG00000011089) #19 ENSSTOG00000011083 #18 STK16 (ENSSTOG00000025197) #20 TUBA4A (ENSSTOG00000019497) #21 ENSSTOG00000025418 #22 DNAJB2 (ENSSTOG00000011511) #23 PTPRN (ENSSTOG00000011522) #24 ENSSTOG00000011538 #25 DNPEP (ENSSTOG00000011546) #26 DES (ENSSTOG00000012352) #27 SPEG (ENSSTOG00000012359) #28 SPEGNB (ENSSTOG00000034380) #30 GMPPA (ENSSTOG00000028855) #32 ASIC4 (ENSSTOG00000012402) #33 CHPF (ENSSTOG00000012409) #34 TMEM198 (ENSSTOG00000012415) #35 OBSL1 (ENSSTOG00000012425) #36 INHA (ENSSTOG00000012437) #37 STK11IP (ENSSTOG00000012441) SLC4A3 (ENSSTOG00000003859) Arctic ground squirrel MODERN SPECIES 76 FEV (ENSUPAG00010012515) #7 CRYBA2 (ENSUPAG00010012524) #8 CFAP65 (ENSUPAG00010012541) #9 IHH (ENSUPAG00010012634) #10 NHEJ1 (ENSUPAG00010012641) #11 SLC23A3 (ENSUPAG00010012663) #12 CNPPD1 (ENSUPAG00010012676) #13 ENSUPAG00010012690 ZFAND2B (ENSUPAG00010012706) #15 ABCB6 (ENSUPAG00010012726) #16 ATG9A (ENSUPAG00010012767) #17 ANKZF1 (ENSUPAG00010012803) #18 GLB1L (ENSUPAG00010012811) #19 STK16 (ENSUPAG00010012826) #20 TUBA4A (ENSUPAG00010012836) #21 ENSUPAG00010012846 #22 DNAJB2 (ENSUPAG00010012939) #23 PTPRN (ENSUPAG00010013022) #24 ENSUPAG00010013057 ENSUPAG00010013060 ENSUPAG00010013070 #25 DNPEP (ENSUPAG00010013076) #26 DES (ENSUPAG00010013134) #27 SPEG (ENSUPAG00010013153) #28 ENSUPAG00010013257 GMPPA (ENSUPAG00010013262) #32 ENSUPAG00010013318 #31 ASIC4 (ENSUPAG00010013332) #33 CHPF (ENSUPAG00010013363) #34 TMEM198 (ENSUPAG00010013374) #35 OBSL1 (ENSUPAG00010013394) #36 Hystricomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Degu DUPLICATION Degu MODERN SPECIES 58 PIGC (ENSODEG00000020006) SUCO (ENSODEG00000012824) FASLG (ENSODEG00000013657) ENSODEG00000012275 ENSODEG00000011983 ENSODEG00000011586 TNFSF4 (ENSODEG00000013566) ENSODEG00000012361 ANKRD45 (ENSODEG00000015522) KLHL20 (ENSODEG00000011896) CENPL (ENSODEG00000012023) DARS2 (ENSODEG00000012436) ZBTB37 (ENSODEG00000012780) ENSODEG00000011939 RC3H1 (ENSODEG00000014185) ENSODEG00000013399 #22 ENSODEG00000012722 GPR52 (ENSODEG00000020014) ENSODEG00000019890 ENSODEG00000012029 ENSODEG00000013023 ENSODEG00000013050 MRPS14 (ENSODEG00000011705) TNN (ENSODEG00000011528) TNR (ENSODEG00000010742) ENSODEG00000019950 COP1 (ENSODEG00000011329) ENSODEG00000011378 ENSODEG00000010604 ENSODEG00000019845 PAPPA2 (ENSODEG00000010628) Degu MODERN SPECIES 167 ENSODEG00000012770 ENSODEG00000013317 ENSODEG00000012608 CDC25A (ENSODEG00000013712) NME6 (ENSODEG00000013578) OSBPL11 (ENSODEG00000012476) B3GNT5 (ENSODEG00000020343) ENSODEG00000012517 KLHL24 (ENSODEG00000015151) YEATS2 (ENSODEG00000015298) MAP6D1 (ENSODEG00000013420) PARL (ENSODEG00000013822) ENSODEG00000014006 ABCC5 (ENSODEG00000014249) ENSODEG00000012268 ENSODEG00000012404 #22 EIF2B5 (ENSODEG00000012756) DVL3 (ENSODEG00000012849) AP2M1 (ENSODEG00000012988) ABCF3 (ENSODEG00000013982) VWA5B2 (ENSODEG00000013878) ALG3 (ENSODEG00000013548) ECE2 (ENSODEG00000015263) CAMK2N2 (ENSODEG00000012896) PSMD2 (ENSODEG00000013158) ENSODEG00000013872 ENSODEG00000012718 FAM131A (ENSODEG00000013175) CLCN2 (ENSODEG00000014349) ENSODEG00000013008 ENSODEG00000014007 Long-tailed chinchilla MODERN SPECIES 276 ENSCLAG00000000258 ENSCLAG00000000656 ENSCLAG00000000676 ENSCLAG00000000731 ENSCLAG00000000777 ENSCLAG00000000243 ENSCLAG00000000057 ENSCLAG00000000062 ENSCLAG00000000083 ENSCLAG00000000095 ENSCLAG00000000142 ENSCLAG00000000293 ENSCLAG00000000338 #22 ENSCLAG00000000161 ENSCLAG00000000179 ENSCLAG00000000391 ENSCLAG00000000840 ENSCLAG00000000885 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 7 ENSHGLG00000045617 BHMT (ENSHGLG00000050585) BHMT2 (ENSHGLG00000036952) DMGDH (ENSHGLG00000000837) ARSB (ENSHGLG00000000586) ENSHGLG00000000380 ENSHGLG00000040355 ENSHGLG00000035099 SCAMP1 (ENSHGLG00000048514) AP3B1 (ENSHGLG00000001480) ENSHGLG00000019786 ENSHGLG00000000425 OTP (ENSHGLG00000003908) ENSHGLG00000017808 ENSHGLG00000038347 ENSHGLG00000041303 #22 ENSHGLG00000002178 ENSHGLG00000038975 ZBED3 (ENSHGLG00000042521) AGGF1 (ENSHGLG00000000455) ENSHGLG00000001729 ENSHGLG00000001594 S100Z (ENSHGLG00000047331) ENSHGLG00000044569 ENSHGLG00000000412 ENSHGLG00000001189 F2RL2 (ENSHGLG00000001444) ENSHGLG00000001079 ENSHGLG00000000494 ENSHGLG00000002909 ENSHGLG00000001351 Naked mole-rat female MODERN SPECIES 8 E2F7 (ENSHGLG00000006491) NAV3 (ENSHGLG00000012083) ENSHGLG00000010015 ENSHGLG00000042592 SYT1 (ENSHGLG00000047548) PAWR (ENSHGLG00000017940) ENSHGLG00000036431 PPP1R12A (ENSHGLG00000014201) OTOGL (ENSHGLG00000013295) PTPRQ (ENSHGLG00000011762) MYF6 (ENSHGLG00000003419) MYF5 (ENSHGLG00000003654) ENSHGLG00000003757 ACSS3 (ENSHGLG00000004579) PPFIA2 (ENSHGLG00000000429) ENSHGLG00000036317 #22 CCDC59 (ENSHGLG00000001711) METTL25 (ENSHGLG00000038393) TMTC2 (ENSHGLG00000000320) ENSHGLG00000018244 ENSHGLG00000000758 ENSHGLG00000000965 LRRIQ1 (ENSHGLG00000000302) ALX1 (ENSHGLG00000000937) ENSHGLG00000036253 RASSF9 (ENSHGLG00000034316) NTS (ENSHGLG00000001320) Primates ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00910000146920 #29 ENSGT00940000163812 #30 ENSGT01080000257504 ENSGT00940000157018 #32 ENSGT01070000253857 #31 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 Haplorrhini ANCESTRAL SPECIES 10 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Tarsier MODERN SPECIES 4547 WNT10A (ENSTSYG00000025654) CRYBA2 (ENSTSYG00000013997) #8 CFAP65 (ENSTSYG00000001842) #9 IHH (ENSTSYG00000027903) #10 NHEJ1 (ENSTSYG00000008101) #11 SLC23A3 (ENSTSYG00000008144) #12 CNPPD1 (ENSTSYG00000030043) #13 RETREG2 (ENSTSYG00000029557) #14 ZFAND2B (ENSTSYG00000011643) #15 ABCB6 (ENSTSYG00000011725) #16 ATG9A (ENSTSYG00000011740) #17 ANKZF1 (ENSTSYG00000011747) #18 GLB1L (ENSTSYG00000011748) #19 STK16 (ENSTSYG00000011749) #20 TUBA4A (ENSTSYG00000011750) #21 TUBA4B (ENSTSYG00000006608) #22 DNAJB2 (ENSTSYG00000032934) #23 PTPRN (ENSTSYG00000028843) #24 RESP18 (ENSTSYG00000036994) #25 DNPEP (ENSTSYG00000012757) #26 DES (ENSTSYG00000002577) #27 SPEG (ENSTSYG00000028472) #28 SPEGNB (ENSTSYG00000034494) #30 ENSTSYG00000034447 #29 GMPPA (ENSTSYG00000002895) #32 ENSTSYG00000036310 ASIC4 (ENSTSYG00000035540) #33 CHPF (ENSTSYG00000030277) #34 TMEM198 (ENSTSYG00000005705) #35 OBSL1 (ENSTSYG00000034296) #36 INHA (ENSTSYG00000029739) #37 Simiiformes ANCESTRAL SPECIES 15 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Catarrhini ANCESTRAL SPECIES 16 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Hominoidea ANCESTRAL SPECIES 15 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Hominidae ANCESTRAL SPECIES 17 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Homo/Pan/Gorilla group ANCESTRAL SPECIES 14 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Homo/Pan group ANCESTRAL SPECIES 13 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Pan ANCESTRAL SPECIES 12 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000008124 #25 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000163812 #30 ENSGT00910000146920 #29 ENSGT00940000157018 #32 ENSGT01080000257504 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 Bonobo MODERN SPECIES 15 ENSPPAG00000018034 #7 CRYBA2 (ENSPPAG00000018250) #8 CFAP65 (ENSPPAG00000020522) #9 IHH (ENSPPAG00000034087) #10 NHEJ1 (ENSPPAG00000042844) #11 SLC23A3 (ENSPPAG00000041866) #12 CNPPD1 (ENSPPAG00000034311) #13 RETREG2 (ENSPPAG00000040645) #14 ZFAND2B (ENSPPAG00000034039) #15 ABCB6 (ENSPPAG00000031060) #16 ATG9A (ENSPPAG00000035200) #17 ANKZF1 (ENSPPAG00000031695) #18 GLB1L (ENSPPAG00000035895) #19 TUBA4A (ENSPPAG00000011142) #21 STK16 (ENSPPAG00000030750) #20 TUBA4B (ENSPPAG00000031611) #22 DNAJB2 (ENSPPAG00000030650) #23 PTPRN (ENSPPAG00000041023) #24 RESP18 (ENSPPAG00000037556) #25 DNPEP (ENSPPAG00000032275) #26 DES (ENSPPAG00000029971) #27 SPEG (ENSPPAG00000030686) #28 SPEGNB (ENSPPAG00000042274) #30 ENSPPAG00000007591 #29 GMPPA (ENSPPAG00000027140) #32 ENSPPAG00000003233 ENSPPAG00000040744 #33 CHPF (ENSPPAG00000031735) #34 TMEM198 (ENSPPAG00000028455) #35 OBSL1 (ENSPPAG00000037124) #36 INHA (ENSPPAG00000043060) #37 Chimpanzee MODERN SPECIES 15 FEV (ENSPTRG00000045039) #7 CRYBA2 (ENSPTRG00000012934) #8 CFAP65 (ENSPTRG00000012937) #9 IHH (ENSPTRG00000012938) #10 NHEJ1 (ENSPTRG00000034481) #11 SLC23A3 (ENSPTRG00000012940) #12 CNPPD1 (ENSPTRG00000012941) #13 RETREG2 (ENSPTRG00000012942) #14 ZFAND2B (ENSPTRG00000012944) #15 ABCB6 (ENSPTRG00000012945) #16 ATG9A (ENSPTRG00000012943) #17 ANKZF1 (ENSPTRG00000012946) #18 GLB1L (ENSPTRG00000012947) #19 TUBA4A (ENSPTRG00000012949) #21 STK16 (ENSPTRG00000012948) #20 TUBA4B (ENSPTRG00000045592) #22 DNAJB2 (ENSPTRG00000012951) #23 PTPRN (ENSPTRG00000012952) #24 RESP18 (ENSPTRG00000012953) #25 DNPEP (ENSPTRG00000012954) #26 DES (ENSPTRG00000012955) #27 SPEG (ENSPTRG00000012957) #28 SPEGNB (ENSPTRG00000047748) #30 ENSPTRG00000050174 #29 GMPPA (ENSPTRG00000012959) #32 ENSPTRG00000043499 ASIC4 (ENSPTRG00000012960) #33 CHPF (ENSPTRG00000012961) #34 TMEM198 (ENSPTRG00000012962) #35 OBSL1 (ENSPTRG00000012963) #36 INHA (ENSPTRG00000012964) #37 Human MODERN SPECIES 11 FEV (ENSG00000163497) #7 CRYBA2 (ENSG00000163499) #8 CFAP65 (ENSG00000181378) #9 IHH (ENSG00000163501) #10 NHEJ1 (ENSG00000187736) #11 SLC23A3 (ENSG00000213901) #12 CNPPD1 (ENSG00000115649) #13 RETREG2 (ENSG00000144567) #14 ZFAND2B (ENSG00000158552) #15 ABCB6 (ENSG00000115657) #16 ATG9A (ENSG00000198925) #17 ANKZF1 (ENSG00000163516) #18 GLB1L (ENSG00000163521) #19 STK16 (ENSG00000115661) #20 TUBA4A (ENSG00000127824) #21 TUBA4B (ENSG00000243910) #22 DNAJB2 (ENSG00000135924) #23 PTPRN (ENSG00000054356) #24 RESP18 (ENSG00000182698) #25 DNPEP (ENSG00000123992) #26 DES (ENSG00000175084) #27 SPEG (ENSG00000072195) #28 ENSG00000286143 SPEGNB (ENSG00000286095) #30 GMPPA (ENSG00000144591) #32 ASIC4 (ENSG00000072182) #33 CHPF (ENSG00000123989) #34 TMEM198 (ENSG00000188760) #35 OBSL1 (ENSG00000124006) #36 INHA (ENSG00000123999) #37 STK11IP (ENSG00000144589) Gorilla MODERN SPECIES 15 CYP27A1 (ENSGGOG00000003243) PRKAG3 (ENSGGOG00000003249) WNT6 (ENSGGOG00000003259) WNT10A (ENSGGOG00000000870) ENSGGOG00000007771 FEV (ENSGGOG00000010787) #7 CRYBA2 (ENSGGOG00000010794) #8 CFAP65 (ENSGGOG00000010798) #9 ENSGGOG00000041386 #10 NHEJ1 (ENSGGOG00000010822) #11 SLC23A3 (ENSGGOG00000010828) #12 CNPPD1 (ENSGGOG00000010837) #13 RETREG2 (ENSGGOG00000010846) #14 STK16 (ENSGGOG00000010907) #20 TUBA4A (ENSGGOG00000023578) #21 TUBA4B (ENSGGOG00000040612) #22 DNAJB2 (ENSGGOG00000010915) #23 PTPRN (ENSGGOG00000011854) #24 RESP18 (ENSGGOG00000004296) #25 DNPEP (ENSGGOG00000003423) #26 DES (ENSGGOG00000002710) #27 SPEG (ENSGGOG00000044111) #28 SPEGNB (ENSGGOG00000039116) #30 ENSGGOG00000037437 #29 GMPPA (ENSGGOG00000002725) #32 ENSGGOG00000042221 ASIC4 (ENSGGOG00000002730) #33 CHPF (ENSGGOG00000002736) #34 TMEM198 (ENSGGOG00000003590) #35 OBSL1 (ENSGGOG00000003593) #36 INHA (ENSGGOG00000003603) #37 Orangutan MODERN SPECIES 15 FEV (ENSPPYG00000013189) #7 CRYBA2 (ENSPPYG00000013190) #8 CFAP65 (ENSPPYG00000013191) #9 IHH (ENSPPYG00000033632) #10 NHEJ1 (ENSPPYG00000013193) #11 SLC23A3 (ENSPPYG00000013194) #12 CNPPD1 (ENSPPYG00000013195) #13 ENSPPYG00000013196 ZFAND2B (ENSPPYG00000013197) #15 ABCB6 (ENSPPYG00000013198) #16 ATG9A (ENSPPYG00000013199) #17 ANKZF1 (ENSPPYG00000013200) #18 GLB1L (ENSPPYG00000013201) #19 STK16 (ENSPPYG00000013202) #20 TUBA4A (ENSPPYG00000013203) #21 TUBA4B (ENSPPYG00000038644) #22 DNAJB2 (ENSPPYG00000013204) #23 PTPRN (ENSPPYG00000013205) #24 ENSPPYG00000013206 #25 DNPEP (ENSPPYG00000013207) #26 DES (ENSPPYG00000039389) #27 SPEG (ENSPPYG00000013208) #28 SPEGNB (ENSPPYG00000033057) #30 GMPPA (ENSPPYG00000013209) #32 ENSPPYG00000013210 #33 CHPF (ENSPPYG00000013211) #34 TMEM198 (ENSPPYG00000013212) #35 OBSL1 (ENSPPYG00000013213) #36 INHA (ENSPPYG00000013214) #37 STK11IP (ENSPPYG00000013215) SLC4A3 (ENSPPYG00000013216) Gibbon MODERN SPECIES 14 FEV (ENSNLEG00000009001) #7 CRYBA2 (ENSNLEG00000009012) #8 CFAP65 (ENSNLEG00000009025) #9 IHH (ENSNLEG00000009054) #10 NHEJ1 (ENSNLEG00000009056) #11 SLC23A3 (ENSNLEG00000009070) #12 CNPPD1 (ENSNLEG00000034862) #13 RETREG2 (ENSNLEG00000035903) #14 ZFAND2B (ENSNLEG00000009113) #15 ABCB6 (ENSNLEG00000009125) #16 ATG9A (ENSNLEG00000009166) #17 ANKZF1 (ENSNLEG00000009207) #18 GLB1L (ENSNLEG00000009246) #19 STK16 (ENSNLEG00000034331) #20 TUBA4A (ENSNLEG00000027445) #21 TUBA4B (ENSNLEG00000009327) #22 ENSNLEG00000009330 #23 PTPRN (ENSNLEG00000009337) #24 ENSNLEG00000030465 #25 DNPEP (ENSNLEG00000009368) #26 DES (ENSNLEG00000009433) #27 SPEG (ENSNLEG00000009468) #28 SPEGNB (ENSNLEG00000032398) #30 ENSNLEG00000034644 #29 GMPPA (ENSNLEG00000009508) #32 ENSNLEG00000028627 ENSNLEG00000009517 #33 CHPF (ENSNLEG00000009523) #34 TMEM198 (ENSNLEG00000009531) #35 ENSNLEG00000009540 #36 INHA (ENSNLEG00000009559) #37 Platyrrhini ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Cebidae ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Cebidae_a ANCESTRAL SPECIES 5 ENSGT00940000153993.B ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT00940000159962 ENSGT00930000150980.b ENSGT00940000162031 ENSGT00390000005536.e ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00390000012132 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.m ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b.b ENSGT00390000007809.a ENSGT00940000161132 ENSGT00940000161665 ENSGT00940000156707 ENSGT00950000183019.f.b.a ENSGT00390000016495 ENSGT00940000160329 ENSGT00940000160653 ENSGT00950000183080.a.a ENSGT00560000078683 ENSGT00940000159521 ENSGT00950000182960.a.a.a.a.b.rb.n.a.a ENSGT00940000153804.B ENSGT00940000158666 Bolivian squirrel monkey MODERN SPECIES 153 NCKAP5L (ENSSBOG00000028145) TMBIM6 (ENSSBOG00000024527) FMNL3 (ENSSBOG00000026511) PRPF40B (ENSSBOG00000025670) ENSSBOG00000027018 FAM186B (ENSSBOG00000016980) ENSSBOG00000036027 KCNH3 (ENSSBOG00000027569) SPATS2 (ENSSBOG00000023909) DNAJC22 (ENSSBOG00000033980) C1QL4 (ENSSBOG00000033432) TROAP (ENSSBOG00000034178) PRPH (ENSSBOG00000032145) ENSSBOG00000005771 ##22 TUBA1B (ENSSBOG00000022158) ENSSBOG00000028238 #22 LMBR1L (ENSSBOG00000023418) DHH (ENSSBOG00000036092) RHEBL1 (ENSSBOG00000035130) KMT2D (ENSSBOG00000035169) PRKAG1 (ENSSBOG00000021677) DDN (ENSSBOG00000021863) WNT1 (ENSSBOG00000023811) WNT10B (ENSSBOG00000016250) ARF3 (ENSSBOG00000021606) ENSSBOG00000018490 FKBP11 (ENSSBOG00000023963) ENSSBOG00000034756 ENSSBOG00000029649 CCDC65 (ENSSBOG00000023064) RND1 (ENSSBOG00000001346) Atlantogenata DUPLICATION Atlantogenata DUPLICATION Atlantogenata ANCESTRAL SPECIES ENSGT00940000154457.a.a.n.a #22 Afrotheria ANCESTRAL SPECIES ENSGT00940000154457.a.a.n.a #22 Afrotheria_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.n.a #22 Elephant MODERN SPECIES 180 NANP (ENSLAFG00000015738) ENSLAFG00000028792 #22 ENSLAFG00000012710 ABHD12 (ENSLAFG00000002307) PYGB (ENSLAFG00000029096) ENTPD6 (ENSLAFG00000015560) VSX1 (ENSLAFG00000018392) ACSS1 (ENSLAFG00000011493) APMAP (ENSLAFG00000011820) CST7 (ENSLAFG00000022218) SYNDIG1 (ENSLAFG00000013030) CST3 (ENSLAFG00000015020) ENSLAFG00000002805 ENSLAFG00000006741 CST8 (ENSLAFG00000002803) ENSLAFG00000030756 ENSLAFG00000008240 Tenrec MODERN SPECIES 10860 ENSETEG00000000832 #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000154457.a.a.n.a #22 Armadillo MODERN SPECIES 1454 RCL1 (ENSDNOG00000019911) AK3 (ENSDNOG00000038787) CDC37L1 (ENSDNOG00000015975) PLPP6 (ENSDNOG00000015974) SPATA6L (ENSDNOG00000038916) SLC1A1 (ENSDNOG00000001798) ENSDNOG00000042157 ENSDNOG00000035748 ENSDNOG00000042655 ENSDNOG00000012636 RFX3 (ENSDNOG00000018668) PUM3 (ENSDNOG00000008157) KCNV2 (ENSDNOG00000041737) VLDLR (ENSDNOG00000001086) SMARCA2 (ENSDNOG00000006402) ENSDNOG00000040306 #22 ST8SIA4 (ENSDNOG00000046147) Atlantogenata ANCESTRAL SPECIES ENSGT00940000154457.a.a.n.b #22 Xenarthra ANCESTRAL SPECIES ENSGT00940000154457.a.a.n.b #22 Armadillo DUPLICATION Armadillo MODERN SPECIES 3183 ENSDNOG00000031267 ENSDNOG00000033063 #22 Armadillo MODERN SPECIES 2774 SDHAF3 (ENSDNOG00000034065) DLX5 (ENSDNOG00000008778) DLX6 (ENSDNOG00000031561) SEM1 (ENSDNOG00000048095) ENSDNOG00000039816 #22 SLC25A13 (ENSDNOG00000015565) ENSDNOG00000047415 ENSDNOG00000033564 PDK4 (ENSDNOG00000012861) ASB4 (ENSDNOG00000043911) PON2 (ENSDNOG00000048645) PON3 (ENSDNOG00000005791) PON1 (ENSDNOG00000006882) PPP1R9A (ENSDNOG00000006871) ENSDNOG00000036759 SGCE (ENSDNOG00000002355) CASD1 (ENSDNOG00000007252) ENSDNOG00000045185 COL1A2 (ENSDNOG00000001921) Atlantogenata ANCESTRAL SPECIES ENSGT00940000154457.a.a.o #22 Afrotheria ANCESTRAL SPECIES 1 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.o #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 ENSGT00940000158471 ENSGT00940000159765 ENSGT00940000156948 ENSGT00940000156504 Afrotheria_a ANCESTRAL SPECIES 1 ENSGT00940000161562 #7 ENSGT00940000160306 #8 ENSGT00430000031142 #9 ENSGT00940000159207 #10 ENSGT00390000009940 #11 ENSGT00950000182953.A #12 ENSGT00390000000862 #13 ENSGT00940000162511 #14 ENSGT00940000159648 #15 ENSGT00940000156160 #16 ENSGT00390000014839.b #17 ENSGT00390000005911 #18 ENSGT00950000182942.a.b #19 ENSGT00550000075037 #20 ENSGT00950000183165.a #21 ENSGT00940000154457.a.a.o #22 ENSGT00940000160220 #23 ENSGT00940000154095.b.b #24 ENSGT00390000003164 #26 ENSGT00940000155522 #27 ENSGT00940000161126 #28 ENSGT00940000157018 #32 ENSGT00940000159052 #33 ENSGT01050000244857.B.b #34 ENSGT00390000016940.c.b #35 ENSGT00940000156702.b #36 ENSGT00390000005935 #37 ENSGT00940000158471 ENSGT00940000159765 ENSGT00940000156948 ENSGT00940000156504 Hyrax MODERN SPECIES 4291 ZFAND2B (ENSPCAG00000002022) #15 ABCB6 (ENSPCAG00000002055) #16 ATG9A (ENSPCAG00000002161) #17 ANKZF1 (ENSPCAG00000002281) #18 GLB1L (ENSPCAG00000002335) #19 STK16 (ENSPCAG00000002450) #20 TUBA4A (ENSPCAG00000002485) #21 TUBA4B (ENSPCAG00000002517) #22 DNAJB2 (ENSPCAG00000002528) #23 PTPRN (ENSPCAG00000002587) #24 Xenarthra ANCESTRAL SPECIES 73 ENSGT00940000153993.B ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT00940000159962 ENSGT00930000150980.b ENSGT00940000162031 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00390000012132 ENSGT00940000160203 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.o #22 ENSGT00940000161665 ENSGT00940000156707 ENSGT00950000183019.f.b.a ENSGT00390000016495 ENSGT00940000160329 ENSGT00940000160653 ENSGT00950000183080.a.a ENSGT00940000159521 ENSGT00940000153804.B ENSGT00940000158666 ENSGT00940000155606.b ENSGT00950000182837.b.a ENSGT00940000155687 ENSGT00390000010327 Sloth MODERN SPECIES 8644 ENSCHOG00000008921 #22 Armadillo DUPLICATION Armadillo DUPLICATION Armadillo MODERN SPECIES 4263 ENSDNOG00000033314 ENSDNOG00000045899 #22 ENSDNOG00000043135 CNTNAP5 (ENSDNOG00000002344) Armadillo MODERN SPECIES 3535 ENSDNOG00000036704 ENSDNOG00000038380 #22 C5AR1 (ENSDNOG00000038763) DHX34 (ENSDNOG00000031738) MEIS3 (ENSDNOG00000005541) SLC8A2 (ENSDNOG00000024107) KPTN (ENSDNOG00000043885) NAPA (ENSDNOG00000032517) ZNF541 (ENSDNOG00000049267) BICRA (ENSDNOG00000044109) ENSDNOG00000043390 Armadillo MODERN SPECIES 4535 PRR5L (ENSDNOG00000005900) TRAF6 (ENSDNOG00000031700) RAG1 (ENSDNOG00000006294) RAG2 (ENSDNOG00000032392) IFTAP (ENSDNOG00000039872) ENSDNOG00000043539 ENSDNOG00000044998 #22 ENSDNOG00000041722 Armadillo MODERN SPECIES 2554 OLIG3 (ENSDNOG00000042405) ENSDNOG00000033108 #22 ENSDNOG00000047511 ENSDNOG00000049724 IL22RA2 (ENSDNOG00000035934) IL20RA (ENSDNOG00000034429) SLC35D3 (ENSDNOG00000036032) PEX7 (ENSDNOG00000039698) MAP3K5 (ENSDNOG00000019294) MAP7 (ENSDNOG00000013217) BCLAF1 (ENSDNOG00000019473) ENSDNOG00000032576 PDE7B (ENSDNOG00000041927) AHI1 (ENSDNOG00000003425) Armadillo MODERN SPECIES 311 ENSDNOG00000033170 NCKAP5L (ENSDNOG00000049196) TMBIM6 (ENSDNOG00000049468) FMNL3 (ENSDNOG00000016285) PRPF40B (ENSDNOG00000044961) ENSDNOG00000019053 KCNH3 (ENSDNOG00000033584) ENSDNOG00000038206 DNAJC22 (ENSDNOG00000001855) C1QL4 (ENSDNOG00000017845) TROAP (ENSDNOG00000017843) PRPH (ENSDNOG00000035037) ENSDNOG00000004121 ENSDNOG00000039572 #22 RHEBL1 (ENSDNOG00000006437) KMT2D (ENSDNOG00000041118) PRKAG1 (ENSDNOG00000006640) DDN (ENSDNOG00000042932) WNT1 (ENSDNOG00000006617) WNT10B (ENSDNOG00000006613) ARF3 (ENSDNOG00000010454) ENSDNOG00000035391 CCDC65 (ENSDNOG00000006591) RND1 (ENSDNOG00000035948) DDX23 (ENSDNOG00000043176) CACNB3 (ENSDNOG00000043665) ADCY6 (ENSDNOG00000040679) TEX49 (ENSDNOG00000048512) Marsupialia ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Diprotodontia ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Wallaby MODERN SPECIES 14312 ENSMEUG00000008063 #22 Sauria ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Lepidosauria ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Episquamata ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Toxicofera ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Elapidae ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Elapidae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Acanthophiinae ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Eastern brown snake MODERN SPECIES 1423 ENSPTXG00000017286 #22 Indian cobra MODERN SPECIES 6 ENSNNAG00000008196 ENSNNAG00000008210 MKLN1 (ENSNNAG00000008327) ENSNNAG00000009648 ENSNNAG00000009675 CHCHD3 (ENSNNAG00000009710) EXOC4 (ENSNNAG00000009854) ENSNNAG00000009939 SLC35B4 (ENSNNAG00000009967) FBH1 (ENSNNAG00000010034) ANKRD16 (ENSNNAG00000010359) ENSNNAG00000010372 ENSNNAG00000010393 ENSNNAG00000010458 NET1 (ENSNNAG00000010474) ENSNNAG00000010547 #22 COPG2 (ENSNNAG00000010588) MEST (ENSNNAG00000010812) CEP41 (ENSNNAG00000010922) CPA2 (ENSNNAG00000011289) TMEM209 (ENSNNAG00000011563) KLHDC10 (ENSNNAG00000011635) ENSNNAG00000011841 ENSNNAG00000011852 UBE2H (ENSNNAG00000011870) STRIP2 (ENSNNAG00000007642) AHCYL2 (ENSNNAG00000007765) SMO (ENSNNAG00000007908) ENSNNAG00000007987 ENSNNAG00000008012 ENSNNAG00000008061 Archelosauria ANCESTRAL SPECIES 26 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00940000154457.b ##22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000154457.a.b ##22 ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 Archosauria ANCESTRAL SPECIES 32 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160329 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.b.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 ENSGT01050000245365 ENSGT00940000178340 Aves ANCESTRAL SPECIES 37 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160329 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 ENSGT01050000245365 ENSGT00940000178340 Neognathae ANCESTRAL SPECIES 31 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160329 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 ENSGT01050000245365 ENSGT00940000178340 Neognathae_b ANCESTRAL SPECIES 30 ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160329 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00940000154457.b.db.b ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 ENSGT00950000183178.a ENSGT00940000155637 Neognathae_c ANCESTRAL SPECIES 34 ENSGT00940000159544 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160329 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 ENSGT00950000183178.a ENSGT00940000155637 Kakapo MODERN SPECIES 15 CACNB3 (ENSSHBG00005012618) DDX23 (ENSSHBG00005012584) RND1 (ENSSHBG00005012569) CCDC65 (ENSSHBG00005001117) FKBP11 (ENSSHBG00005001116) ARF3 (ENSSHBG00005013165) WNT1 (ENSSHBG00005013129) ENSSHBG00005013112 PRKAG1 (ENSSHBG00005013091) ENSSHBG00005013072 ENSSHBG00005013050 RHEBL1 (ENSSHBG00005013025) DHH (ENSSHBG00005013010) LMBR1L (ENSSHBG00005012994) TUBA1B (ENSSHBG00005012958) ENSSHBG00005012920 #22 PRPH (ENSSHBG00005012882) C1QL4 (ENSSHBG00005012859) DNAJC22 (ENSSHBG00005012847) SPATS2 (ENSSHBG00005012834) MCRS1 (ENSSHBG00005012807) RDH5 (ENSSHBG00005012624) INPP1 (ENSSHBG00005012606) GDF11 (ENSSHBG00005012593) SARNP (ENSSHBG00005012577) ORMDL2 (ENSSHBG00005012568) DNAJC14 (ENSSHBG00005012554) ENSSHBG00005012538 ##35 Cryptodira ANCESTRAL SPECIES ENSGT00940000154457.a.a #22 Testudinoidea ANCESTRAL SPECIES 21 ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B.g ENSGT00940000153804.B.h ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000154457.a.b ##22 ENSGT00940000160203 ENSGT00390000012132 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156832 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 Emydidae ANCESTRAL SPECIES 49 ENSGT00950000182837.b.a.g ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B.h ENSGT00940000159521 ENSGT00950000183080.a.a ENSGT00940000160653 ENSGT00940000160329 ENSGT00390000016495 ENSGT00950000183019.f.b.a ENSGT00940000156707 ENSGT00940000161665 ENSGT00940000161132 ENSGT00390000007809.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a #22 ENSGT00940000160203 ENSGT00940000155969 ENSGT00390000012136 ENSGT00390000001138.a ENSGT00940000161742 ENSGT00390000005536 ENSGT00940000159891 ENSGT00390000002689 ENSGT00940000161168 ENSGT00940000156785 ENSGT00940000161052 ENSGT00390000002944 ENSGT00950000183178.a ENSGT00940000155637 ENSGT00390000016940.c.a ##35 painted turtle MODERN SPECIES 871 CACNB3 (ENSCPBG00000019984) DDX23 (ENSCPBG00000019988) RND1 (ENSCPBG00000019989) CCDC65 (ENSCPBG00000019991) FKBP11 (ENSCPBG00000019993) ARF3 (ENSCPBG00000019994) WNT10B (ENSCPBG00000019996) WNT1 (ENSCPBG00000020000) DDN (ENSCPBG00000020002) PRKAG1 (ENSCPBG00000020003) RHEBL1 (ENSCPBG00000020007) DHH (ENSCPBG00000020008) LMBR1L (ENSCPBG00000020010) ENSCPBG00000020015 ENSCPBG00000020016 ENSCPBG00000020017 #22 PRPH (ENSCPBG00000020019) ENSCPBG00000020020 C1QL4 (ENSCPBG00000020024) DNAJC22 (ENSCPBG00000020026) SPATS2 (ENSCPBG00000020032) KCNH3 (ENSCPBG00000020047) MCRS1 (ENSCPBG00000020099) ITGA7 (ENSCPBG00000020106) BLOC1S1 (ENSCPBG00000020120) RDH5 (ENSCPBG00000020123) ENSCPBG00000020129 ENSCPBG00000020133 Testudinidae ANCESTRAL SPECIES 25 ENSGT00390000002944 ENSGT00940000161052 ENSGT00940000156785 ENSGT00940000156832 ENSGT00940000161168 ENSGT00390000002689 ENSGT00940000159891 ENSGT00390000005536 ENSGT00940000161742 ENSGT00390000001138.a ENSGT00390000012136 ENSGT00940000155969 ENSGT00390000012132 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.b ENSGT00390000007809.a ENSGT00940000161132 ENSGT00940000161665 ENSGT00940000156707 ENSGT00950000183019.f.b.a ENSGT00390000016495 ENSGT00940000160329 ENSGT00940000160653 ENSGT00950000183080.a.a ENSGT00940000159521 ENSGT00940000153804.B.h ENSGT00940000153804.B.g ENSGT00940000158666 ENSGT00940000155606.b Goode s thornscrub tortoise MODERN SPECIES 17 ENSGEVG00005006869 ENSGEVG00005006890 GDF11 (ENSGEVG00005006922) ENSGEVG00005006951 CD63 (ENSGEVG00005006974) RDH5 (ENSGEVG00005007037) BLOC1S1 (ENSGEVG00005007167) ITGA7 (ENSGEVG00005007223) MCRS1 (ENSGEVG00005007469) KCNH3 (ENSGEVG00005007545) SPATS2 (ENSGEVG00005007708) DNAJC22 (ENSGEVG00005007795) C1QL4 (ENSGEVG00005007818) PRPH (ENSGEVG00005007842) ENSGEVG00005007895 ##22 ENSGEVG00005007919 #22 ENSGEVG00005007941 LMBR1L (ENSGEVG00005007977) DHH (ENSGEVG00005008078) RHEBL1 (ENSGEVG00005008190) ENSGEVG00005008350 PRKAG1 (ENSGEVG00005008401) ENSGEVG00005008432 WNT1 (ENSGEVG00005008476) WNT10B (ENSGEVG00005008535) ARF3 (ENSGEVG00005008644) FKBP11 (ENSGEVG00005008664) ENSGEVG00005008679 ENSGEVG00005008701 RND1 (ENSGEVG00005008717) DDX23 (ENSGEVG00005008745) Actinopterygii ANCESTRAL SPECIES 230 ENSGT00940000161997.b ENSGT00390000005536 ENSGT00390000001138.a ENSGT00390000003749 ENSGT00730000111107 ENSGT00940000158593 ENSGT00390000016940.c.a ##35 ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000183188.A.a ENSGT00940000159517 ENSGT00940000160756 Neopterygii ANCESTRAL SPECIES 71 ENSGT00390000002174.a ENSGT00940000155637 ENSGT00950000183178.a ENSGT00390000013978.d ENSGT00940000156785 ENSGT00940000161997.b ENSGT00390000005536 ENSGT00390000001138.a ENSGT00390000003749 ENSGT00730000111107 ENSGT00940000158593 ENSGT00390000016940.c.a ##35 ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000183188.A.a ENSGT00940000159517 Osteoglossocephalai ANCESTRAL SPECIES 45 ENSGT00390000003749 ENSGT00940000158593.a ENSGT00390000016940.c.a.b ##35 ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000183188.A.a ENSGT00940000159517 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330.c ENSGT00940000161297 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000158208.a.b ENSGT00940000154770 ENSGT00940000160351 Clupeocephala DUPLICATION Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 39 ENSGT00950000183038.a.b.a.g ENSGT01020000230633 ENSGT00390000006330.a.b ENSGT00940000155637 ENSGT00940000156785 ENSGT00940000161997.b ENSGT01010000222336.b.a.a ENSGT00390000005536 ENSGT00390000003749 ENSGT00940000158593.a ENSGT00390000016940.c.a.b ##35 ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a ENSGT00940000154457.a.a.a.a #22 ENSGT00950000183188.A.a.a ENSGT00940000159517 ENSGT00940000178340 ENSGT01050000245365 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330.c ENSGT00940000161297 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000158208.a.b ENSGT00940000154770 ENSGT00940000158956.d ENSGT00940000156890.a.a ENSGT00940000160528.a Euteleosteomorpha ANCESTRAL SPECIES 691 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a.a.a #22 Protacanthopterygii ANCESTRAL SPECIES 524 ENSGT00950000183165.b.b.a.a ##21 ENSGT00940000154457.a.a.a.a #22 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 335 ENSGT00940000158675.b.a ENSGT00940000160528.a.c ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749 ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.d ##35 ENSGT00940000160203.a ENSGT00940000154457.a.b.i ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a #22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00940000178340 Huchen MODERN SPECIES 3490 prph (ENSHHUG00000015328) ENSHHUG00000015354 ##22 ENSHHUG00000015884 ENSHHUG00000015887 #22 pmela (ENSHHUG00000015891) cdk2 (ENSHHUG00000015903) ENSHHUG00000016551 Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00950000182994.B.a.a.a.e ENSGT00940000162980.l ENSGT00950000182835.c.c.g.b.h ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h Salmo ANCESTRAL SPECIES 42 ENSGT00990000211052 ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749 ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.d ##35 ENSGT00940000160203.a ENSGT00940000154457.a.b.i ##22 ENSGT00940000154457.a.a.a.a.b #22 ENSGT00950000183165.b.b.a.a.b ##21 ENSGT00940000154457.a.a.a.a.a.a #22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00390000002944.c.a ENSGT00940000166043.c ENSGT00940000154971.v ENSGT00530000063607.a.n.a ENSGT00390000002215.j.a ENSGT01050000244940.a.a.g.a.b ENSGT00940000159587.k ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000154276.g.b ENSGT00940000155330.c.e ENSGT00940000161297 ENSGT01000000214440.B.c ENSGT00530000063255.A.l Atlantic salmon MODERN SPECIES 14 ENSSSAG00000066545 ENSSSAG00000083495 ENSSSAG00000113917 AGAP2 (ENSSSAG00000081214) TSPAN31 (ENSSSAG00000114003) CDK4 (ENSSSAG00000081232) MARCHF9 (ENSSSAG00000106845) mettl1 (ENSSSAG00000081237) ENSSSAG00000109811 ENSSSAG00000065105 ENSSSAG00000081252 ENSSSAG00000081255 ENSSSAG00000081259 ENSSSAG00000081262 ##35 prph (ENSSSAG00000081265) ENSSSAG00000120054 #22 ENSSSAG00000081267 ##22 ENSSSAG00000081268 ENSSSAG00000081271 cdk2 (ENSSSAG00000081273) ENSSSAG00000081276 ENSSSAG00000081288 ENSSSAG00000081289 ENSSSAG00000121952 ENSSSAG00000081291 ENSSSAG00000122117 ENSSSAG00000084911 ENSSSAG00000081424 ENSSSAG00000093889 ENSSSAG00000081436 stx16 (ENSSSAG00000051743) Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000158675.b.a ENSGT00940000160528.a.c ENSGT00990000211052 ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749.h ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.d ##35 ENSGT00940000160203.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a #22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00390000002944.c.a ENSGT00940000166043.c ENSGT00940000154971.v ENSGT00530000063607.a.n.a ENSGT00390000002215.j.a ENSGT01050000244940.a.a.g.a.b ENSGT00940000159587.k ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000154276.g.b ENSGT00940000155330.c.e ENSGT00940000161297 ENSGT01000000214440.B.c ENSGT00530000063255.A.l Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000160528.a.c ENSGT00990000211052 ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749.h ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.c.a ##35 ENSGT00390000016940.c.a.b.d ##35 ENSGT00940000160203.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a #22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00940000178340 ENSGT00940000166043.c ENSGT00940000154971.v ENSGT00530000063607.a.n.a ENSGT00390000002215.j.a ENSGT01050000244940.a.a.g.a.b ENSGT00940000159587.k ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000154276.g.b ENSGT00940000155330.c.e ENSGT01000000214440.B.c ENSGT00530000063255.A.l ENSGT00940000155569.a.a.g Chinook salmon MODERN SPECIES 31 ENSOTSG00005029846 AGAP2 (ENSOTSG00005029850) TSPAN31 (ENSOTSG00005029899) cdk4 (ENSOTSG00005029900) ENSOTSG00005029901 mettl1 (ENSOTSG00005029902) cyp27b1 (ENSOTSG00005029907) mcrs1 (ENSOTSG00005030187) suox (ENSOTSG00005030192) viml (ENSOTSG00005030194) MMP19 (ENSOTSG00005030195) ENSOTSG00005030198 ##35 ENSOTSG00005030199 prph (ENSOTSG00005030201) ENSOTSG00005030203 ENSOTSG00005030204 #22 pmela (ENSOTSG00005030206) cdk2 (ENSOTSG00005030209) ENSOTSG00005030214 RAB31 (ENSOTSG00005030216) ENSOTSG00005030217 ENSOTSG00005030218 ENSOTSG00005030223 ENSOTSG00005030224 ENSOTSG00005030235 ENSOTSG00005030236 nsrp1 (ENSOTSG00005030260) ENSOTSG00005030262 ENSOTSG00005030263 coro6 (ENSOTSG00005030265) dnajc3b (ENSOTSG00005030268) Salmoninae ANCESTRAL SPECIES 3 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c ##35 ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b #22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h ENSGT00390000001799 Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.a ##35 ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b #22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h Salmo ANCESTRAL SPECIES 6 ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.a ##35 ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00950000183165.b.b.a.a.a ##21 ENSGT00940000154457.a.a.a.a.a.b #22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h River trout MODERN SPECIES 5 SPRYD3 (ENSSTUG00000029972) ENSSTUG00000030009 ENSSTUG00000030016 PIP4K2C (ENSSTUG00000030040) AGAP2 (ENSSTUG00000030435) cdk4 (ENSSTUG00000030494) MARCHF9 (ENSSTUG00000030513) mettl1 (ENSSTUG00000030520) cyp27b1 (ENSSTUG00000030531) mcrs1 (ENSSTUG00000030592) MMP19 (ENSSTUG00000030640) ENSSTUG00000030724 ##35 timeless (ENSSTUG00000030744) prph (ENSSTUG00000030868) ENSSTUG00000030882 ##21 ENSSTUG00000030910 #22 ENSSTUG00000030926 cdk2 (ENSSTUG00000030963) sarnp (ENSSTUG00000030983) gdf11 (ENSSTUG00000031005) ENSSTUG00000031013 ENSSTUG00000031037 ENSSTUG00000031040 TMBIM6 (ENSSTUG00000031044) avil (ENSSTUG00000031107) CTDSP2 (ENSSTUG00000035433) ENSSTUG00000035504 slc11a2 (ENSSTUG00000035551) STX16 (ENSSTUG00000038143) npepl1 (ENSSTUG00000038253) ctsz (ENSSTUG00000038327) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000095933 ENSSSAG00000066258 ENSSSAG00000066219 AGAP2 (ENSSSAG00000066082) ENSSSAG00000114855 CDK4 (ENSSSAG00000066064) MARCHF9 (ENSSSAG00000120192) ENSSSAG00000066042 ENSSSAG00000081242 ENSSSAG00000065034 ENSSSAG00000064977 timeless (ENSSSAG00000063060) ENSSSAG00000064959 ENSSSAG00000095268 ##22 ENSSSAG00000099199 ##21 ENSSSAG00000104771 #22 ENSSSAG00000062931 ENSSSAG00000110386 ENSSSAG00000062906 ENSSSAG00000062891 ENSSSAG00000119317 ENSSSAG00000085110 ENSSSAG00000062862 ENSSSAG00000093567 ENSSSAG00000095673 ENSSSAG00000093593 ENSSSAG00000055460 ENSSSAG00000055407 ENSSSAG00000114701 npepl1 (ENSSSAG00000055345) ctsz (ENSSSAG00000106221) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.b ##35 ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b #22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h Rainbow trout MODERN SPECIES 8 ENSOMYG00000034548 ENSOMYG00000034484 IGFBP-6A2 (ENSOMYG00000034410) ENSOMYG00000062479 ENSOMYG00000034294 AGAP2 (ENSOMYG00000034215) CDK4 (ENSOMYG00000034166) MARCHF9 (ENSOMYG00000034152) ENSOMYG00000034078 ENSOMYG00000034027 ENSOMYG00000033987 ENSOMYG00000064376 ##35 ENSOMYG00000022941 ENSOMYG00000022779 ENSOMYG00000022743 ##22 ENSOMYG00000022658 #22 ENSOMYG00000022608 ENSOMYG00000022586 ENSOMYG00000022493 ENSOMYG00000022454 ENSOMYG00000022383 ENSOMYG00000022335 ENSOMYG00000022320 ENSOMYG00000050293 ENSOMYG00000021276 ENSOMYG00000021004 hig1a (ENSOMYG00000020981) nramp-alpha (ENSOMYG00000017702) ENSOMYG00000071026 ENSOMYG00000017242 npepl1 (ENSOMYG00000017146) Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.b ##35 ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b #22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h Coho salmon MODERN SPECIES ENSOKIG00005003443 PIP4K2C (ENSOKIG00005003471) GPR182 (ENSOKIG00005003575) AGAP2 (ENSOKIG00005003591) ENSOKIG00005003607 cdk4 (ENSOKIG00005003611) MARCHF9 (ENSOKIG00005003617) ENSOKIG00005003622 CYP27B1 (ENSOKIG00005003640) mcrs1 (ENSOKIG00005003686) MMP19 (ENSOKIG00005003697) ENSOKIG00005003704 ##35 timeless (ENSOKIG00005003732) prph (ENSOKIG00005003787) ENSOKIG00005003801 ##22 ENSOKIG00005003813 #22 ENSOKIG00005003819 ENSOKIG00005003829 CDK2 (ENSOKIG00005003833) ENSOKIG00005003857 ENSOKIG00005003886 ENSOKIG00005003895 ENSOKIG00005003904 TMBIM6 (ENSOKIG00005003910) AVIL (ENSOKIG00005003921) CTDSP2 (ENSOKIG00005003944) HIGD1A (ENSOKIG00005003974) ENSOKIG00005004009 STX16 (ENSOKIG00005004161) npepl1 (ENSOKIG00005004189) ctsz (ENSOKIG00005004239) Huchen MODERN SPECIES 1241 prph (ENSHHUG00000019277) ENSHHUG00000019011 ##22 ENSHHUG00000019003 #22 ENSHHUG00000018859 cdk2 (ENSHHUG00000018828) gdf11 (ENSHHUG00000018806) ENSHHUG00000018804 ENSHHUG00000018792 ENSHHUG00000018783 ENSHHUG00000018738 TMBIM6 (ENSHHUG00000018627) avil (ENSHHUG00000017576) CTDSP2 (ENSHHUG00000017515) HIGD1A (ENSHHUG00000017494) slc11a2 (ENSHHUG00000016771) STX16 (ENSHHUG00000016740) npepl1 (ENSHHUG00000016677) Salmoninae ANCESTRAL SPECIES 2162 ENSGT00950000183165.b.b.a.a ##21 ENSGT00940000154457.a.a.a.a.b #22 Salmoninae_a ANCESTRAL SPECIES 15 ENSGT01000000214440.B.c ENSGT00940000161297 ENSGT00940000155330.c.e ENSGT00940000154276.g.b ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000159587.k ENSGT01050000244940.a.a.g.a.b ENSGT00390000002215.j.a ENSGT00530000063607.a.n.a ENSGT00940000154971.v ENSGT00940000166043.c ENSGT00390000002944.c.a ENSGT00940000159517.d ENSGT00950000183188.A.a.a.e ENSGT00950000183165.b.b.a.a ##21 ENSGT00940000154457.a.a.a.a.b #22 ENSGT00940000154457.a.b.i ##22 ENSGT00940000160203.a ENSGT00390000016940.c.a.b.d ##35 ENSGT00940000158593.a.d ENSGT00390000003749 ENSGT00390000005536.n ENSGT00950000182905.a.a.b.c ENSGT00390000017840.g ENSGT00940000158208.a.b.b ENSGT00940000154770.vb ENSGT00940000160351.f ENSGT00940000158956.d.b ENSGT00990000211052 ENSGT00940000160528.a.c ENSGT00940000158675.b.a Salmo ANCESTRAL SPECIES 42 ENSGT00940000161297 ENSGT00940000155330.c.e ENSGT00940000154276.g.b ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000159587.k ENSGT01050000244940.a.a.g.a.b ENSGT00390000002215.j.a ENSGT00530000063607.a.n.a ENSGT00940000154971.v ENSGT00940000166043.c ENSGT00390000002944.c.a ENSGT00940000159517.d ENSGT00950000183188.A.a.a.e ENSGT00940000154457.a.a.a.a.a.a #22 ENSGT00950000183165.b.b.a.a.b ##21 ENSGT00940000154457.a.a.a.a.b #22 ENSGT00940000154457.a.b.i ##22 ENSGT00940000160203.a ENSGT00390000016940.c.a.b.d ##35 ENSGT00940000158593.a.d ENSGT00390000003749 ENSGT00390000005536.n ENSGT00950000182905.a.a.b.c ENSGT00390000017840.g ENSGT00940000158208.a.b.b ENSGT00940000154770.vb ENSGT00940000160351.f ENSGT00940000158956.d.b ENSGT00990000211052 ENSGT00940000160528.a.c ENSGT00940000158675.b.a River trout MODERN SPECIES 7 STX16 (ENSSTUG00000015167) EEF1AKMT3 (ENSSTUG00000015200) slc11a2 (ENSSTUG00000015227) ENSSTUG00000015520 ENSSTUG00000015526 avil (ENSSTUG00000015750) TMBIM6 (ENSSTUG00000018856) ENSSTUG00000019264 ENSSTUG00000019273 ENSSTUG00000019341 gdf11 (ENSSTUG00000019356) sarnp (ENSSTUG00000019366) cdk2 (ENSSTUG00000019455) pmela (ENSSTUG00000019493) ENSSTUG00000019504 ##21 TUBA4B (ENSSTUG00000019519) #22 ENSSTUG00000019623 ##22 ENSSTUG00000019639 prph (ENSSTUG00000019642) ENSSTUG00000019680 ##35 MMP19 (ENSSTUG00000019690) suox (ENSSTUG00000019706) ENSSTUG00000019716 ENSSTUG00000019728 mcrs1 (ENSSTUG00000019739) cyp27b1 (ENSSTUG00000019763) mettl1 (ENSSTUG00000020097) MARCHF9 (ENSSTUG00000020124) cdk4 (ENSSTUG00000020137) TSPAN31 (ENSSTUG00000002246) AGAP2 (ENSSTUG00000002929) Oncorhynchus ANCESTRAL SPECIES 882 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.b ENSGT00940000154457.a.a.a.a.b #22 Rainbow trout MODERN SPECIES 28 slc11a2 (ENSOMYG00000047677) ENSOMYG00000047573 ENSOMYG00000047571 ENSOMYG00000047558 ENSOMYG00000047520 ENSOMYG00000051097 ENSOMYG00000060775 ENSOMYG00000047510 ENSOMYG00000047506 ENSOMYG00000047503 ENSOMYG00000047499 ENSOMYG00000047493 ENSOMYG00000048658 ENSOMYG00000047480 ENSOMYG00000070767 ENSOMYG00000056942 #22 ENSOMYG00000073921 ENSOMYG00000047471 ##22 ENSOMYG00000047467 ENSOMYG00000073139 ENSOMYG00000075691 ENSOMYG00000047457 ##35 ENSOMYG00000047454 ENSOMYG00000047452 ENSOMYG00000047434 ENSOMYG00000047410 ENSOMYG00000049565 MARCHF9 (ENSOMYG00000047409) CDK4 (ENSOMYG00000047397) TSPAN31 (ENSOMYG00000047383) AGAP2 (ENSOMYG00000047366) Acanthomorphata ANCESTRAL SPECIES 489 ENSGT00950000183165.b.b.a.a ##21 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Cod MODERN SPECIES ENSGMOG00000003301 srpk1b (ENSGMOG00000035260) ENSGMOG00000027858 ENSGMOG00000032596 ENSGMOG00000022810 ENSGMOG00000029848 ada (ENSGMOG00000011406) ENSGMOG00000020076 ttpal (ENSGMOG00000011416) hnf4a (ENSGMOG00000011421) fitm2 (ENSGMOG00000011427) GDAP1L1 (ENSGMOG00000011433) ENSGMOG00000011467 jph2 (ENSGMOG00000011440) ENSGMOG00000035100 ##21 ENSGMOG00000022382 #22 ENSGMOG00000011456 ENSGMOG00000011475 kansl2 (ENSGMOG00000011485) ENSGMOG00000029952 ENSGMOG00000030202 ENSGMOG00000034634 ENSGMOG00000011496 ctdsp2 (ENSGMOG00000011507) ENSGMOG00000011514 ENSGMOG00000036947 ENSGMOG00000030863 MARCHF9 (ENSGMOG00000011529) tspan31 (ENSGMOG00000022298) agap2 (ENSGMOG00000011545) ENSGMOG00000033443 Euacanthomorphacea ANCESTRAL SPECIES 515 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Percomorphaceae ANCESTRAL SPECIES 451 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Percomorphaceae_B ANCESTRAL SPECIES 309 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 NAME_4 ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Sheepshead minnow MODERN SPECIES 899 adamts3 (ENSCVAG00000002061) NPFFR2 (ENSCVAG00000002068) ENSCVAG00000002074 ENSCVAG00000002078 olfml2ba (ENSCVAG00000002082) atf6 (ENSCVAG00000002095) ENSCVAG00000002107 lmx1a (ENSCVAG00000002116) ENSCVAG00000002120 #22 ENSCVAG00000002128 sele (ENSCVAG00000002142) si:dkey-51e6.1 (ENSCVAG00000002147) si:dkey-97o5.1 (ENSCVAG00000002156) scyl3 (ENSCVAG00000000849) ENSCVAG00000002169 trabd2b (ENSCVAG00000002179) Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Turquoise killifish MODERN SPECIES 1616 IGDCC4 (ENSNFUG00015004491) SCAMP5 (ENSNFUG00015004482) LOXL1 (ENSNFUG00015004478) ENSNFUG00015004474 C18H15ORF59 (ENSNFUG00015004469) cd276 (ENSNFUG00015004464) UBL7 (ENSNFUG00015004456) tent4b (ENSNFUG00015004422) HEATR3 (ENSNFUG00015004394) SDR42E1 (ENSNFUG00015004380) WTIP (ENSNFUG00015004367) GPI (ENSNFUG00015004311) KIAA0355 (ENSNFUG00015004264) ss18l2 (ENSNFUG00015004246) lsm14ab (ENSNFUG00015023333) ENSNFUG00015023298 #22 ENSNFUG00015023286 kctd15a (ENSNFUG00015023278) ENSNFUG00015023277 PEPD (ENSNFUG00015023263) ADAMTSL7 (ENSNFUG00015023225) ENSNFUG00015023203 larp6a (ENSNFUG00015023196) TM2D3 (ENSNFUG00015023191) TARSL2 (ENSNFUG00015023046) ulk3 (ENSNFUG00015023023) ENSNFUG00015023019 CPLX3 (ENSNFUG00015023016) CSK (ENSNFUG00015022989) ENSNFUG00015022980 EDC3 (ENSNFUG00015022976) Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Pomacentridae ANCESTRAL SPECIES 100 ENSGT00810000125541 ENSGT00940000155289.C ENSGT00940000162649.e.b ENSGT00940000162649.f.b ENSGT00730000111029.b ENSGT00940000155698.C ENSGT00390000014700.b.a.b.b.a ENSGT00390000014595.a.b ENSGT00940000165851 ENSGT00940000154318.B ENSGT00390000015505 ENSGT01010000222360.D.a ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00950000183205.b.a.b.a.a ENSGT00940000154457.a.a.a.a #22 ENSGT00940000160271 ENSGT00940000176920 ENSGT00940000158693.A ENSGT00950000183183.a ENSGT00940000156833.b ENSGT00940000155575.i.b ENSGT00940000157054.c.a ENSGT00940000156505.t Bicolor damselfish MODERN SPECIES 894 ENSSPAG00000007924 rnps1 (ENSSPAG00000009383) ENSSPAG00000009404 ENSSPAG00000009425 ENSSPAG00000009452 tspan4b (ENSSPAG00000009466) ENSSPAG00000009497 nosip (ENSSPAG00000009511) rcn3 (ENSSPAG00000009539) lin7b (ENSSPAG00000009551) snrnp70 (ENSSPAG00000009563) ENSSPAG00000009578 ENSSPAG00000009602 #22 ABCC1 (ENSSPAG00000009624) ENSSPAG00000009679 trpm4a (ENSSPAG00000009692) zgc:86896 (ENSSPAG00000009751) wipi1 (ENSSPAG00000009786) SLC16A6 (ENSSPAG00000009813) ENSSPAG00000009842 ENSSPAG00000009859 dhps (ENSSPAG00000009870) NHERF2 (ENSSPAG00000009924) sstr5 (ENSSPAG00000009935) ENSSPAG00000009943 ENSSPAG00000009958 Pomacentridae_A ANCESTRAL SPECIES 105 ENSGT00810000125541 ENSGT00940000155289.C ENSGT00940000162649.e.b ENSGT00940000162649.f.b.c ENSGT00730000111029.b ENSGT00940000155698.C ENSGT00390000014700.b.a.b.b.a ENSGT00390000014595.a.b ENSGT00940000165851 ENSGT00940000154318.B ENSGT00390000015505 ENSGT01010000222360.D.a ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00950000183205.b.a.b.a.a ENSGT00940000154457.a.a.a.a #22 ENSGT00940000160271 ENSGT00940000176920 ENSGT00940000158693.A ENSGT00950000183183.a ENSGT00940000156833.b ENSGT00940000155575.i.b ENSGT00940000157054.c.a ENSGT00940000156505.t Amphiprion ANCESTRAL SPECIES 31 ENSGT00810000125541 ENSGT00940000155289.C ENSGT00940000162649.e.b ENSGT00940000162649.f.b.c ENSGT00730000111029.b ENSGT00940000155698.C ENSGT00390000014700.b.a.b.b.a ENSGT00390000014595.a.b ENSGT00940000165851 ENSGT00940000154318.B ENSGT00390000015505 ENSGT01010000222360.D.a ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00950000183205.b.a.b.a.a ENSGT00940000154457.a.a.a.a #22 ENSGT00940000160271 ENSGT00940000176920 ENSGT00940000158693.A ENSGT00950000183183.a ENSGT00940000156833.b ENSGT00940000155575.i.b ENSGT00940000157054.c.a ENSGT00940000156505.t Clown anemonefish MODERN SPECIES 2894 rcn3 (ENSAOCG00000000728) lin7b (ENSAOCG00000011692) snrnp70 (ENSAOCG00000011672) ENSAOCG00000011616 ENSAOCG00000002287 #22 ABCC1 (ENSAOCG00000011529) ENSAOCG00000011393 Percomorphaceae_C ANCESTRAL SPECIES 247 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Eupercaria ANCESTRAL SPECIES 209 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Eupecaria_A ANCESTRAL SPECIES 210 ENSGT00940000154457.a.a.a.a #22 ENSGT00940000154457.a.b ##22 Eupecaria_B DUPLICATION Eupecaria_B ANCESTRAL SPECIES 190 ENSGT00940000154457.a.a.a.a.c #22 ENSGT00940000154457.a.b ##22 Perciformes ANCESTRAL SPECIES 196 ENSGT00940000154457.a.a.a.a.c #22 ENSGT00940000154457.a.b ##22 Perciformes_a ANCESTRAL SPECIES 291 ENSGT00940000154457.a.a.a.a.c #22 ENSGT00940000154457.a.b ##22 Pike perch DUPLICATION Pike perch DUPLICATION Pike perch MODERN SPECIES 103 ENSSLUG00000002866 ENSSLUG00000002861 ccn5 (ENSSLUG00000002859) ada (ENSSLUG00000002481) pkig (ENSSLUG00000002403) ttpal (ENSSLUG00000002394) hnf4a (ENSSLUG00000002372) R3HDML (ENSSLUG00000002362) fitm2 (ENSSLUG00000002359) GDAP1L1 (ENSSLUG00000002357) jph2 (ENSSLUG00000002353) ENSSLUG00000002351 ##22 TUBA4B (ENSSLUG00000002342) #22 ENSSLUG00000002336 #22 ENSSLUG00000002329 #22 ENSSLUG00000002305 #22 tuba1c (ENSSLUG00000002293) pmelb (ENSSLUG00000002252) sarnp (ENSSLUG00000002239) ccnt1 (ENSSLUG00000002225) kansl2 (ENSSLUG00000002197) ENSSLUG00000002179 TMBIM6 (ENSSLUG00000002156) ctdsp2 (ENSSLUG00000002138) SLC11A2 (ENSSLUG00000001755) MARCHF9 (ENSSLUG00000024754) tspan31 (ENSSLUG00000024752) agap2 (ENSSLUG00000024722) Pike perch MODERN SPECIES 103 ENSSLUG00000024675 gpr182 (ENSSLUG00000024703) ZBTB39 (ENSSLUG00000024706) agap2 (ENSSLUG00000024722) tspan31 (ENSSLUG00000024752) MARCHF9 (ENSSLUG00000024754) SLC11A2 (ENSSLUG00000001755) ctdsp2 (ENSSLUG00000002138) TMBIM6 (ENSSLUG00000002156) ENSSLUG00000002179 kansl2 (ENSSLUG00000002197) ccnt1 (ENSSLUG00000002225) sarnp (ENSSLUG00000002239) pmelb (ENSSLUG00000002252) tuba1c (ENSSLUG00000002293) ENSSLUG00000002305 #22 ENSSLUG00000002329 #22 ENSSLUG00000002336 #22 TUBA4B (ENSSLUG00000002342) #22 ENSSLUG00000002351 ##22 jph2 (ENSSLUG00000002353) GDAP1L1 (ENSSLUG00000002357) fitm2 (ENSSLUG00000002359) R3HDML (ENSSLUG00000002362) hnf4a (ENSSLUG00000002372) ttpal (ENSSLUG00000002394) pkig (ENSSLUG00000002403) ada (ENSSLUG00000002481) ccn5 (ENSSLUG00000002859) ENSSLUG00000002861 ENSSLUG00000002866 Pike perch DUPLICATION Pike perch MODERN SPECIES 103 tcea2 (ENSSLUG00000024533) SOX18 (ENSSLUG00000024540) xkr7b (ENSSLUG00000024542) CCM2L (ENSSLUG00000024547) CABLES2 (ENSSLUG00000024551) ENSSLUG00000024556 ENSSLUG00000024561 ENSSLUG00000024562 ENSSLUG00000024566 hsd17b10 (ENSSLUG00000024569) FAM120C (ENSSLUG00000024576) IDH3G (ENSSLUG00000024594) AVPR2 (ENSSLUG00000024631) slc16a1b (ENSSLUG00000024633) lima1a (ENSSLUG00000024640) ENSSLUG00000024644 #22 spryd3 (ENSSLUG00000024652) igfbp6b (ENSSLUG00000024663) ENSSLUG00000024675 gpr182 (ENSSLUG00000024703) ZBTB39 (ENSSLUG00000024706) agap2 (ENSSLUG00000024722) tspan31 (ENSSLUG00000024752) MARCHF9 (ENSSLUG00000024754) SLC11A2 (ENSSLUG00000001755) ctdsp2 (ENSSLUG00000002138) TMBIM6 (ENSSLUG00000002156) ENSSLUG00000002179 kansl2 (ENSSLUG00000002197) ccnt1 (ENSSLUG00000002225) sarnp (ENSSLUG00000002239) Pike perch MODERN SPECIES 103 ENSSLUG00000002866 ENSSLUG00000002861 ccn5 (ENSSLUG00000002859) ada (ENSSLUG00000002481) pkig (ENSSLUG00000002403) ttpal (ENSSLUG00000002394) hnf4a (ENSSLUG00000002372) R3HDML (ENSSLUG00000002362) fitm2 (ENSSLUG00000002359) GDAP1L1 (ENSSLUG00000002357) jph2 (ENSSLUG00000002353) ENSSLUG00000002351 ##22 TUBA4B (ENSSLUG00000002342) #22 ENSSLUG00000002336 #22 ENSSLUG00000002329 #22 ENSSLUG00000002305 #22 tuba1c (ENSSLUG00000002293) pmelb (ENSSLUG00000002252) sarnp (ENSSLUG00000002239) ccnt1 (ENSSLUG00000002225) kansl2 (ENSSLUG00000002197) ENSSLUG00000002179 TMBIM6 (ENSSLUG00000002156) ctdsp2 (ENSSLUG00000002138) SLC11A2 (ENSSLUG00000001755) MARCHF9 (ENSSLUG00000024754) tspan31 (ENSSLUG00000024752) agap2 (ENSSLUG00000024722) ZBTB39 (ENSSLUG00000024706) Eupecaria_B DUPLICATION Eupecaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a #22 Perciformes DUPLICATION Perciformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.a #22 Cottioidei DUPLICATION Cottioidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.a.a #22 Lumpfish MODERN SPECIES 22 gpr182 (ENSCLMG00005019756) ENSCLMG00005019755 agap2 (ENSCLMG00005019577) tspan31 (ENSCLMG00005019572) MARCHF9 (ENSCLMG00005019571) SLC11A2 (ENSCLMG00005017747) ctdsp2 (ENSCLMG00005017716) TMBIM6 (ENSCLMG00005017714) ENSCLMG00005017713 kansl2 (ENSCLMG00005017711) ccnt1 (ENSCLMG00005017710) sarnp (ENSCLMG00005017708) pmelb (ENSCLMG00005017707) tuba1c (ENSCLMG00005017706) ENSCLMG00005017705 #22 TUBA4B (ENSCLMG00005017632) #22 ENSCLMG00005017631 ENSCLMG00005017628 ##21 jph2 (ENSCLMG00005017627) GDAP1L1 (ENSCLMG00005017626) fitm2 (ENSCLMG00005017624) hnf4a (ENSCLMG00005017552) ttpal (ENSCLMG00005017546) pkig (ENSCLMG00005017544) ada (ENSCLMG00005017044) ccn5 (ENSCLMG00005017030) ENSCLMG00005017024 ugt5e1 (ENSCLMG00005017018) pfkfb1 (ENSCLMG00005017017) ENSCLMG00005016975 gdi1 (ENSCLMG00005016942) Stickleback MODERN SPECIES 11 FAM120C (ENSGACG00000010554) hsd17b10 (ENSGACG00000010525) ENSGACG00000010523 ENSGACG00000010520 CCM2L (ENSGACG00000010511) xkr7b (ENSGACG00000010506) SOX18 (ENSGACG00000010505) tcea2 (ENSGACG00000010495) rgs19 (ENSGACG00000010490) FAM187A (ENSGACG00000010484) oprl1 (ENSGACG00000010479) NPBWR1 (ENSGACG00000010477) RAB29 (ENSGACG00000010473) cry3a (ENSGACG00000010460) ENSGACG00000010457 ENSGACG00000010436 #22 lama5 (ENSGACG00000010405) adrm1 (ENSGACG00000010370) DNAJC5 (ENSGACG00000010366) ENSGACG00000010359 tpd52l2b (ENSGACG00000010324) ppdpfb (ENSGACG00000010310) ENSGACG00000010308 ptk6b (ENSGACG00000010303) ENSGACG00000010298 nol4lb (ENSGACG00000010294) commd7 (ENSGACG00000010283) dnmt3bb.1 (ENSGACG00000010273) dnmt3bb.2 (ENSGACG00000010262) mapre1b (ENSGACG00000010256) acss2 (ENSGACG00000010216) Cottioidei ANCESTRAL SPECIES 2 ENSGT00390000017567 ENSGT00940000156650.i ENSGT00950000182994.B.a.a.a ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00940000154457.a.a.a.a.d.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT01100000263484.B.b.a Stickleback DUPLICATION Stickleback DUPLICATION Stickleback DUPLICATION Stickleback MODERN SPECIES 11 ENSGACG00000011772 ENSGACG00000011767 ZBTB39 (ENSGACG00000011765) agap2 (ENSGACG00000011751) tspan31 (ENSGACG00000011730) MARCHF9 (ENSGACG00000011728) SLC11A2 (ENSGACG00000011691) ctdsp2 (ENSGACG00000011678) TMBIM6 (ENSGACG00000011650) ENSGACG00000011642 kansl2 (ENSGACG00000011630) ccnt1 (ENSGACG00000011626) sarnp (ENSGACG00000011615) pmelb (ENSGACG00000011605) TUBA4B (ENSGACG00000011595) #22 tuba2 (ENSGACG00000011587) #22 tuba1c (ENSGACG00000011552) TUBA4B (ENSGACG00000011524) #22 jph2 (ENSGACG00000011519) GDAP1L1 (ENSGACG00000011509) fitm2 (ENSGACG00000011502) hnf4a (ENSGACG00000011485) ttpal (ENSGACG00000011479) pkig (ENSGACG00000011477) ada (ENSGACG00000011456) ccn5 (ENSGACG00000011453) ENSGACG00000011450 ugt5e1 (ENSGACG00000011442) pfkfb1 (ENSGACG00000011410) ENSGACG00000011406 gdi1 (ENSGACG00000011384) Stickleback MODERN SPECIES 11 hnf4a (ENSGACG00000011485) ttpal (ENSGACG00000011479) pkig (ENSGACG00000011477) ada (ENSGACG00000011456) ccn5 (ENSGACG00000011453) ENSGACG00000011450 ugt5e1 (ENSGACG00000011442) pfkfb1 (ENSGACG00000011410) ENSGACG00000011406 gdi1 (ENSGACG00000011384) atp6ap1b (ENSGACG00000011378) taf8 (ENSGACG00000011366) camk1gb (ENSGACG00000011358) mical1 (ENSGACG00000011353) src (ENSGACG00000011349) ENSGACG00000011345 #22 pink1 (ENSGACG00000011338) ENSGACG00000011331 ENSGACG00000011309 fam43b (ENSGACG00000011306) mul1b (ENSGACG00000011302) VWA5B1 (ENSGACG00000011296) ddx19a (ENSGACG00000011283) cptp (ENSGACG00000011282) ints11 (ENSGACG00000011260) ENSGACG00000011257 ENSGACG00000011252 ACAP3 (ENSGACG00000011244) HIPK1 (ENSGACG00000011240) sdf4 (ENSGACG00000011217) c1qtnf12 (ENSGACG00000011209) Stickleback MODERN SPECIES 11 ENSGACG00000011406 pfkfb1 (ENSGACG00000011410) ugt5e1 (ENSGACG00000011442) ENSGACG00000011450 ccn5 (ENSGACG00000011453) ada (ENSGACG00000011456) pkig (ENSGACG00000011477) ttpal (ENSGACG00000011479) hnf4a (ENSGACG00000011485) fitm2 (ENSGACG00000011502) GDAP1L1 (ENSGACG00000011509) jph2 (ENSGACG00000011519) TUBA4B (ENSGACG00000011524) #22 tuba1c (ENSGACG00000011552) tuba2 (ENSGACG00000011587) #22 TUBA4B (ENSGACG00000011595) #22 pmelb (ENSGACG00000011605) sarnp (ENSGACG00000011615) ccnt1 (ENSGACG00000011626) kansl2 (ENSGACG00000011630) ENSGACG00000011642 TMBIM6 (ENSGACG00000011650) ctdsp2 (ENSGACG00000011678) SLC11A2 (ENSGACG00000011691) MARCHF9 (ENSGACG00000011728) tspan31 (ENSGACG00000011730) agap2 (ENSGACG00000011751) ZBTB39 (ENSGACG00000011765) ENSGACG00000011767 ENSGACG00000011772 ENSGACG00000011777 Stickleback MODERN SPECIES 11 ZBTB39 (ENSGACG00000011765) agap2 (ENSGACG00000011751) tspan31 (ENSGACG00000011730) MARCHF9 (ENSGACG00000011728) SLC11A2 (ENSGACG00000011691) ctdsp2 (ENSGACG00000011678) TMBIM6 (ENSGACG00000011650) ENSGACG00000011642 kansl2 (ENSGACG00000011630) ccnt1 (ENSGACG00000011626) sarnp (ENSGACG00000011615) pmelb (ENSGACG00000011605) TUBA4B (ENSGACG00000011595) #22 tuba2 (ENSGACG00000011587) #22 tuba1c (ENSGACG00000011552) TUBA4B (ENSGACG00000011524) #22 jph2 (ENSGACG00000011519) GDAP1L1 (ENSGACG00000011509) fitm2 (ENSGACG00000011502) hnf4a (ENSGACG00000011485) ttpal (ENSGACG00000011479) pkig (ENSGACG00000011477) ada (ENSGACG00000011456) ccn5 (ENSGACG00000011453) ENSGACG00000011450 ugt5e1 (ENSGACG00000011442) pfkfb1 (ENSGACG00000011410) ENSGACG00000011406 gdi1 (ENSGACG00000011384) atp6ap1b (ENSGACG00000011378) taf8 (ENSGACG00000011366) Perciformes_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.a #22 Channel bull blenny MODERN SPECIES 21 ugt5e1 (ENSCGOG00000005172) ENSCGOG00000005171 pfkfb1 (ENSCGOG00000004986) ENSCGOG00000004977 ccn5 (ENSCGOG00000004975) ada (ENSCGOG00000004781) pkig (ENSCGOG00000004774) ttpal (ENSCGOG00000004769) hnf4a (ENSCGOG00000004571) R3HDML (ENSCGOG00000004549) fitm2 (ENSCGOG00000004544) GDAP1L1 (ENSCGOG00000004529) jph2 (ENSCGOG00000004527) ENSCGOG00000004524 ##21 ENSCGOG00000004523 tuba2 (ENSCGOG00000003903) #22 ENSCGOG00000016764 ##21 ENSCGOG00000016692 #22 pmelb (ENSCGOG00000016690) sarnp (ENSCGOG00000016688) ccnt1 (ENSCGOG00000016683) kansl2 (ENSCGOG00000016654) ENSCGOG00000016646 TMBIM6 (ENSCGOG00000016617) ctdsp2 (ENSCGOG00000016612) ENSCGOG00000016611 SLC11A2 (ENSCGOG00000013880) MARCHF9 (ENSCGOG00000013837) tspan31 (ENSCGOG00000013833) agap2 (ENSCGOG00000013687) ENSCGOG00000013677 Perciformes DUPLICATION Perciformes ANCESTRAL SPECIES 4 ENSGT00950000182994.B.a.a.a ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.a.f ##21 ENSGT00940000154457.a.a.a.a.d.a.b.a #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Cottioidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.b.a #22 Lumpfish MODERN SPECIES 22 TFCP2 (ENSCLMG00005019199) CSRNP2 (ENSCLMG00005019271) itga5 (ENSCLMG00005019276) RAPGEF3 (ENSCLMG00005019505) slc48a1a (ENSCLMG00005020580) SLC26A9 (ENSCLMG00005000138) PLXNA2 (ENSCLMG00005000356) rca2.1 (ENSCLMG00005002768) ENSCLMG00005002775 ptpn22 (ENSCLMG00005002778) RSBN1 (ENSCLMG00005002784) ENSCLMG00005002888 tmem269 (ENSCLMG00005002948) HSPG2 (ENSCLMG00005003076) agmat (ENSCLMG00005003634) ENSCLMG00005003638 #22 pink1 (ENSCLMG00005003639) ENSCLMG00005003640 ENSCLMG00005003646 fam43b (ENSCLMG00005003696) ENSCLMG00005003697 mul1b (ENSCLMG00005003699) ENSCLMG00005003701 ddx19a (ENSCLMG00005003703) ENSCLMG00005003779 ubxn10 (ENSCLMG00005003780) cptp (ENSCLMG00005003781) ints11 (ENSCLMG00005003784) ENSCLMG00005003789 ENSCLMG00005003792 ACAP3 (ENSCLMG00005003803) Perciformes_a ANCESTRAL SPECIES 2 ENSGT00950000182994.B.a.a.a ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.a.f ##21 ENSGT00940000154457.a.a.a.a.d.a.b.a #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Channel bull blenny MODERN SPECIES 21 pfkfb1 (ENSCGOG00000004986) ENSCGOG00000004977 ccn5 (ENSCGOG00000004975) ada (ENSCGOG00000004781) pkig (ENSCGOG00000004774) ttpal (ENSCGOG00000004769) hnf4a (ENSCGOG00000004571) R3HDML (ENSCGOG00000004549) fitm2 (ENSCGOG00000004544) GDAP1L1 (ENSCGOG00000004529) jph2 (ENSCGOG00000004527) ENSCGOG00000004524 ##21 ENSCGOG00000004523 tuba2 (ENSCGOG00000003903) #22 ENSCGOG00000016764 ##21 ENSCGOG00000016692 #22 pmelb (ENSCGOG00000016690) sarnp (ENSCGOG00000016688) ccnt1 (ENSCGOG00000016683) kansl2 (ENSCGOG00000016654) ENSCGOG00000016646 TMBIM6 (ENSCGOG00000016617) ctdsp2 (ENSCGOG00000016612) ENSCGOG00000016611 SLC11A2 (ENSCGOG00000013880) MARCHF9 (ENSCGOG00000013837) tspan31 (ENSCGOG00000013833) agap2 (ENSCGOG00000013687) ENSCGOG00000013677 gpr182 (ENSCGOG00000013673) ENSCGOG00000012697 Perciformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.b.b #22 Cottioidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.b.b #22 Lumpfish MODERN SPECIES 22 ENSCLMG00005016975 pfkfb1 (ENSCLMG00005017017) ugt5e1 (ENSCLMG00005017018) ENSCLMG00005017024 ccn5 (ENSCLMG00005017030) ada (ENSCLMG00005017044) pkig (ENSCLMG00005017544) ttpal (ENSCLMG00005017546) hnf4a (ENSCLMG00005017552) fitm2 (ENSCLMG00005017624) GDAP1L1 (ENSCLMG00005017626) jph2 (ENSCLMG00005017627) ENSCLMG00005017628 ##21 ENSCLMG00005017631 TUBA4B (ENSCLMG00005017632) #22 ENSCLMG00005017705 #22 tuba1c (ENSCLMG00005017706) pmelb (ENSCLMG00005017707) sarnp (ENSCLMG00005017708) ccnt1 (ENSCLMG00005017710) kansl2 (ENSCLMG00005017711) ENSCLMG00005017713 TMBIM6 (ENSCLMG00005017714) ctdsp2 (ENSCLMG00005017716) SLC11A2 (ENSCLMG00005017747) MARCHF9 (ENSCLMG00005019571) tspan31 (ENSCLMG00005019572) agap2 (ENSCLMG00005019577) ENSCLMG00005019755 gpr182 (ENSCLMG00005019756) ENSCLMG00005019758 Eupecaria_C ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a #22 Gilthead seabream MODERN SPECIES 21 cd63 (ENSSAUG00010011797) letmd1 (ENSSAUG00010011791) zgc:56699 (ENSSAUG00010011789) nr4a1 (ENSSAUG00010011787) tamalin (ENSSAUG00010011779) dgkaa (ENSSAUG00010009293) rnf41 (ENSSAUG00010009251) ankrd52a (ENSSAUG00010008730) ENSSAUG00010008712 ##21 tuba1a (ENSSAUG00010008710) pmelb (ENSSAUG00010008705) sarnp (ENSSAUG00010008698) ENSSAUG00010008697 ##21 ENSSAUG00010008695 #22 ENSSAUG00010008690 #22 TUBA4B (ENSSAUG00010008679) #22 jph2 (ENSSAUG00010008678) GDAP1L1 (ENSSAUG00010008676) fitm2 (ENSSAUG00010008674) R3HDML (ENSSAUG00010008670) hnf4a (ENSSAUG00010008665) ttpal (ENSSAUG00010008662) pkig (ENSSAUG00010008661) ada (ENSSAUG00010008446) ccn5 (ENSSAUG00010008438) ENSSAUG00010008437 ENSSAUG00010008435 ENSSAUG00010008434 ENSSAUG00010008432 ENSSAUG00010008430 ENSSAUG00010008429 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.b #22 Eupecaria_C ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.b #22 Gilthead seabream MODERN SPECIES 21 nemp1 (ENSSAUG00010011798) cd63 (ENSSAUG00010011797) letmd1 (ENSSAUG00010011791) zgc:56699 (ENSSAUG00010011789) nr4a1 (ENSSAUG00010011787) tamalin (ENSSAUG00010011779) dgkaa (ENSSAUG00010009293) rnf41 (ENSSAUG00010009251) ankrd52a (ENSSAUG00010008730) ENSSAUG00010008712 ##21 tuba1a (ENSSAUG00010008710) pmelb (ENSSAUG00010008705) sarnp (ENSSAUG00010008698) ENSSAUG00010008697 ##21 ENSSAUG00010008695 #22 ENSSAUG00010008690 #22 TUBA4B (ENSSAUG00010008679) #22 jph2 (ENSSAUG00010008678) GDAP1L1 (ENSSAUG00010008676) fitm2 (ENSSAUG00010008674) R3HDML (ENSSAUG00010008670) hnf4a (ENSSAUG00010008665) ttpal (ENSSAUG00010008662) pkig (ENSSAUG00010008661) ada (ENSSAUG00010008446) ccn5 (ENSSAUG00010008438) ENSSAUG00010008437 ENSSAUG00010008435 ENSSAUG00010008434 ENSSAUG00010008432 ENSSAUG00010008430 Otomorpha ANCESTRAL SPECIES 114 ENSGT01040000240451.a.b.a ENSGT00940000159587 ENSGT01050000244940.a.a ENSGT00390000002215.j ENSGT00530000063607.a ENSGT00940000154971.v ENSGT00940000166043 ENSGT00390000002944 ENSGT00940000159517 ENSGT00950000183188.A.a.a ENSGT00940000158593.a ENSGT00390000016940.c.a.b ##35 ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.b ##22 ENSGT00940000154457.a.a.a.a #22 ENSGT00390000003749 ENSGT00390000005536 ENSGT01010000222336.b.a.a ENSGT00940000161997.b ENSGT00940000156785 ENSGT00940000155637 ENSGT00390000006330.a.b ENSGT01020000230633 ENSGT00940000156832 ENSGT00950000183167.a.b.b.b ENSGT00940000164745.i.a ENSGT00390000010523.d ENSGT00950000183038.a.b.a.h ENSGT00530000063734.b ENSGT00940000157144.c.b Otophysi ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a #22 Cyprinoidei ANCESTRAL SPECIES 111 ENSGT00950000183188.A.a.a ENSGT00940000158593.a ENSGT00940000159517 ENSGT00390000002944 ENSGT00940000160203 ENSGT00940000154457.b ##22 ENSGT00940000154457.a.a.a.a #22 ENSGT00390000003749 ENSGT00390000005536 ENSGT00940000156785 ENSGT00940000155637 ENSGT00390000006330.a.b ENSGT01020000230633 ENSGT00950000182908.B.c.a ENSGT00940000161079 ENSGT00940000157144.c.a ENSGT01030000234623.a.a.a.a.a.d.a ENSGT00390000012914 ENSGT00940000159430 ENSGT00390000004215.a.b.a ENSGT00740000115534.a.a.fb.b ENSGT00940000156890.a.a.t Cyprininae ANCESTRAL SPECIES 784 ENSGT00940000158593.a.f ENSGT00950000183188.A.a.a ENSGT00940000159517.e ENSGT00390000002944.b ENSGT00940000154457.a.a.a.a #22 ENSGT00390000003749 ENSGT00390000005536.j ENSGT00940000156785.cb ENSGT00940000155637.hb.b Cyprininae_a ANCESTRAL SPECIES 667 ENSGT00940000158593.a.f ENSGT00950000183188.A.a.a ENSGT00940000159517.e ENSGT00390000002944.b ENSGT00940000154457.a.a.a.a #22 ENSGT00390000003749 ENSGT00390000005536.j Golden-line barbel MODERN SPECIES 605 prph (ENSSGRG00000003879) ENSSGRG00000003865 ##22 ENSSGRG00000003232 #22 suox (ENSSGRG00000003205) mcrs1 (ENSSGRG00000002421) ENSSGRG00000002417 ENSSGRG00000002416 nab2 (ENSSGRG00000002414) ENSSGRG00000002413 cnpy2 (ENSSGRG00000002412) ENSSGRG00000002411 DGKA (ENSSGRG00000001869) ENSSGRG00000001805 tp53rk (ENSSGRG00000001801) slc2a10 (ENSSGRG00000001798) ENSSGRG00000001636 ENSSGRG00000001629 PIP4K2C (ENSSGRG00000001560) Clupeiformes ANCESTRAL SPECIES 940 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a ENSGT00940000154457.a.a.a.a #22 Atlantic herring MODERN SPECIES 21 ENSCHAG00000019914 uqcrc1 (ENSCHAG00000019228) TTLL3 (ENSCHAG00000019136) ENSCHAG00000019092 rae1 (ENSCHAG00000019013) ENSCHAG00000018998 gdf11 (ENSCHAG00000018985) sarnp (ENSCHAG00000018982) cdk2 (ENSCHAG00000018905) pmela (ENSCHAG00000018890) MMP19 (ENSCHAG00000018842) ENSCHAG00000018821 ##35 timeless (ENSCHAG00000018595) prph (ENSCHAG00000018574) tuba1b (ENSCHAG00000018544) TUBA4B (ENSCHAG00000018538) #22 suox (ENSCHAG00000018535) mcrs1 (ENSCHAG00000018468) ENSCHAG00000018455 ENSCHAG00000018431 ENSCHAG00000018424 ENSCHAG00000018414 tbc1d20 (ENSCHAG00000018345) rbck1 (ENSCHAG00000018283) maf1a (ENSCHAG00000018196) trib3 (ENSCHAG00000018185) sox12 (ENSCHAG00000018177) pnp4a (ENSCHAG00000018159) ENSCHAG00000018145 rem1 (ENSCHAG00000018123) rbm39a (ENSCHAG00000017579) Clupeocephala ANCESTRAL SPECIES 1094 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b #22 Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES 854 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a #22 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 628 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a #22 Salmoninae ANCESTRAL SPECIES 2196 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a #22 Salmoninae_a ANCESTRAL SPECIES 1059 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a #22 Oncorhynchus ANCESTRAL SPECIES 881 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a #22 Oncorhynchus_a ANCESTRAL SPECIES 968 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a #22 Chinook salmon MODERN SPECIES 7 lima1a (ENSOTSG00005009916) igfbp6b (ENSOTSG00005009915) ENSOTSG00005009828 gpr182 (ENSOTSG00005009827) ENSOTSG00005009826 agap2 (ENSOTSG00005005733) ENSOTSG00005005721 ctdsp2 (ENSOTSG00005005719) TMBIM6 (ENSOTSG00005005718) ENSOTSG00005005717 ccnt1 (ENSOTSG00005005716) ccnt1 (ENSOTSG00005005714) ENSOTSG00005005705 pmelb (ENSOTSG00005005702) ENSOTSG00005005701 TUBA4B (ENSOTSG00005005700) #22 ENSOTSG00005005699 #22 jph2 (ENSOTSG00005005698) GDAP1L1 (ENSOTSG00005005696) fitm2 (ENSOTSG00005005694) R3HDML (ENSOTSG00005005692) hnf4a (ENSOTSG00005005667) ttpal (ENSOTSG00005028588) pkig (ENSOTSG00005028587) ENSOTSG00005028586 ada (ENSOTSG00005027934) ccn5 (ENSOTSG00005027933) pfkfb1 (ENSOTSG00005024375) ENSOTSG00005023923 gdi1 (ENSOTSG00005023907) atp6ap1b (ENSOTSG00005023905) Coho salmon MODERN SPECIES 8 znf740b (ENSOKIG00005031596) ENSOKIG00005031581 ENSOKIG00005031575 ENSOKIG00005043023 gpr182 (ENSOKIG00005042975) ENSOKIG00005042968 agap2 (ENSOKIG00005041804) MARCHF9 (ENSOKIG00005041712) ctdsp2 (ENSOKIG00005041686) TMBIM6 (ENSOKIG00005041653) ENSOKIG00005041627 CCNT1 (ENSOKIG00005041583) ENSOKIG00005041445 pmelb (ENSOKIG00005041373) ENSOKIG00005041338 TUBA4B (ENSOKIG00005041249) #22 tuba1b (ENSOKIG00005041233) jph2 (ENSOKIG00005041215) fitm2 (ENSOKIG00005041202) ENSOKIG00005041168 hnf4a (ENSOKIG00005040952) ttpal (ENSOKIG00005040897) pkig (ENSOKIG00005040874) ada (ENSOKIG00005040663) ccn5 (ENSOKIG00005040624) pfkfb1 (ENSOKIG00005038187) ENSOKIG00005038005 gdi1 (ENSOKIG00005037902) atp6ap1b (ENSOKIG00005037834) TAF8 (ENSOKIG00005037731) ENSOKIG00005037695 Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00940000158956.c ENSGT00940000160351.e ENSGT00940000158208.a.a ENSGT00940000155330.b ENSGT01040000240451.a.b.a.b.b ENSGT01050000244940.a.a.g.b ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544.j ENSGT00940000159544.i ENSGT00390000002944.d ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000159411.b ENSGT00940000160178 ENSGT00530000063693.b ENSGT00940000161086 ENSGT00940000157965.d ENSGT00940000155407 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207.b ENSGT00940000155094.b ENSGT00940000166720.d ENSGT00950000182835.c.c.g.b ENSGT00940000162980 ENSGT00950000182994.B.a.a.a.f Salmoninae ANCESTRAL SPECIES 113 ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b #22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00940000155094.b.a ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f ENSGT00940000156650.i.e ENSGT00390000017567.q Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00940000159609.n.b ENSGT00940000158313.a.b.c ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b #22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00940000155094.b.a ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f ENSGT00940000156650.i.e ENSGT00390000017567.q Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000159609.n.b ENSGT00940000158313.a.b.c ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b #22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f.b ENSGT00940000156650.i.e ENSGT00390000017567.q ENSGT00390000005294.a.b Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000159609.n.b ENSGT00940000158313.a.b.c ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b #22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f.b ENSGT00940000156650.i.e ENSGT00390000017567.q ENSGT00390000005294.a.b Chinook salmon MODERN SPECIES 7 igfbp6b (ENSOTSG00005009915) ENSOTSG00005009828 gpr182 (ENSOTSG00005009827) ENSOTSG00005009826 agap2 (ENSOTSG00005005733) ENSOTSG00005005721 ctdsp2 (ENSOTSG00005005719) TMBIM6 (ENSOTSG00005005718) ENSOTSG00005005717 ccnt1 (ENSOTSG00005005716) ccnt1 (ENSOTSG00005005714) ENSOTSG00005005705 pmelb (ENSOTSG00005005702) ENSOTSG00005005701 TUBA4B (ENSOTSG00005005700) #22 ENSOTSG00005005699 #22 jph2 (ENSOTSG00005005698) GDAP1L1 (ENSOTSG00005005696) fitm2 (ENSOTSG00005005694) R3HDML (ENSOTSG00005005692) hnf4a (ENSOTSG00005005667) ttpal (ENSOTSG00005028588) pkig (ENSOTSG00005028587) ENSOTSG00005028586 ada (ENSOTSG00005027934) ccn5 (ENSOTSG00005027933) pfkfb1 (ENSOTSG00005024375) ENSOTSG00005023923 gdi1 (ENSOTSG00005023907) atp6ap1b (ENSOTSG00005023905) taf8 (ENSOTSG00005023900) Northern pike MODERN SPECIES 11 gpr182 (ENSELUG00000007136) ZBTB39 (ENSELUG00000007121) agap2 (ENSELUG00000007107) tspan31 (ENSELUG00000007060) ENSELUG00000007038 SLC11A2 (ENSELUG00000007018) TMBIM6 (ENSELUG00000006973) ENSELUG00000006909 kansl2 (ENSELUG00000000222) ccnt1 (ENSELUG00000006830) ccnt1 (ENSELUG00000006814) ENSELUG00000006786 pmelb (ENSELUG00000006726) ENSELUG00000006694 #22 ENSELUG00000006681 ENSELUG00000013081 #22 jph2 (ENSELUG00000006661) GDAP1L1 (ENSELUG00000006637) fitm2 (ENSELUG00000006611) R3HDML (ENSELUG00000006594) hnf4a (ENSELUG00000006558) ttpal (ENSELUG00000006513) pkig (ENSELUG00000006496) ada (ENSELUG00000006483) ENSELUG00000032073 ccn5 (ENSELUG00000006428) ENSELUG00000028739 pfkfb1 (ENSELUG00000006386) ITIH6 (ENSELUG00000006309) gdi1 (ENSELUG00000006250) atp6ap1b (ENSELUG00000006198) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.a #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.a #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.a #22 Tiger tail seahorse MODERN SPECIES 261 mfsd6a (ENSHCOG00000008521) ENSHCOG00000008499 ahr1b (ENSHCOG00000008459) ENSHCOG00000008248 sh3bp4a (ENSHCOG00000008245) arl4cb (ENSHCOG00000008233) AOX1 (ENSHCOG00000008197) bzw1a (ENSHCOG00000008122) ENSHCOG00000008098 ENSHCOG00000008091 ENSHCOG00000008045 KYNU (ENSHCOG00000008024) tmem269 (ENSHCOG00000007976) HSPG2 (ENSHCOG00000007952) agmat (ENSHCOG00000007845) ENSHCOG00000007840 #22 fam43b (ENSHCOG00000007837) ENSHCOG00000007832 mul1b (ENSHCOG00000007824) NUP210 (ENSHCOG00000007802) ENSHCOG00000007559 BICD2 (ENSHCOG00000007546) ENSHCOG00000007516 zgc:171857 (ENSHCOG00000007486) WNT7A (ENSHCOG00000007463) FBLN2 (ENSHCOG00000007449) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b #22 Coho salmon MODERN SPECIES 16 ZBTB39 (ENSOKIG00005012335) agap2 (ENSOKIG00005012353) tspan31 (ENSOKIG00005012433) MARCHF9 (ENSOKIG00005012450) SLC11A2 (ENSOKIG00005012522) ctdsp2 (ENSOKIG00005013608) TMBIM6 (ENSOKIG00005013643) ENSOKIG00005013673 kansl2 (ENSOKIG00005013700) ccnt1 (ENSOKIG00005013743) ccnt1 (ENSOKIG00005013752) ENSOKIG00005013769 ENSOKIG00005013804 ENSOKIG00005013819 #22 ENSOKIG00005013854 ENSOKIG00005013875 #22 jph2 (ENSOKIG00005013893) ENSOKIG00005013899 fitm2 (ENSOKIG00005013908) R3HDML (ENSOKIG00005013912) hnf4a (ENSOKIG00005013923) ttpal (ENSOKIG00005014006) pkig (ENSOKIG00005014024) ada (ENSOKIG00005014057) ccn5 (ENSOKIG00005014325) ENSOKIG00005014328 ENSOKIG00005014338 pfkfb1 (ENSOKIG00005014506) ENSOKIG00005018763 gdi1 (ENSOKIG00005018822) atp6ap1b (ENSOKIG00005019630) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Protacanthopterygii ANCESTRAL SPECIES 557 ENSGT00950000183165.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Salmoninae ANCESTRAL SPECIES 1983 ENSGT00950000183165.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Coho salmon MODERN SPECIES 25 STX16 (ENSOKIG00005034527) slc11a2 (ENSOKIG00005034199) ENSOKIG00005034141 CTDSP2 (ENSOKIG00005034104) avil (ENSOKIG00005031571) TMBIM6 (ENSOKIG00005031205) ENSOKIG00005031176 ENSOKIG00005031161 ENSOKIG00005031152 gdf11 (ENSOKIG00005031138) ENSOKIG00005031131 SARNP (ENSOKIG00005031020) cdk2 (ENSOKIG00005030929) pmela (ENSOKIG00005030914) ENSOKIG00005030909 ENSOKIG00005030897 #22 ENSOKIG00005030876 ##22 PRPH (ENSOKIG00005030805) ENSOKIG00005030774 ##35 MMP19 (ENSOKIG00005030747) suox (ENSOKIG00005030755) cyp27b1 (ENSOKIG00005030670) mettl1 (ENSOKIG00005030597) MARCHF9 (ENSOKIG00005030579) CDK4 (ENSOKIG00005030553) TSPAN31 (ENSOKIG00005030501) AGAP2 (ENSOKIG00005030140) ENSOKIG00005030020 ENSOKIG00005030006 ENSOKIG00005029979 SPRYD3 (ENSOKIG00005029871) Huchen MODERN SPECIES 243 ENSHHUG00000047271 gpr182 (ENSHHUG00000047269) ENSHHUG00000047267 agap2 (ENSHHUG00000047216) ENSHHUG00000047213 MARCHF9 (ENSHHUG00000047211) ctdsp2 (ENSHHUG00000047201) TMBIM6 (ENSHHUG00000047190) ENSHHUG00000047179 kansl2 (ENSHHUG00000047158) ccnt1 (ENSHHUG00000047155) sarnp (ENSHHUG00000047137) pmelb (ENSHHUG00000047120) ENSHHUG00000047008 #22 ENSHHUG00000047004 ##21 TUBA4B (ENSHHUG00000047002) #22 ENSHHUG00000046990 jph2 (ENSHHUG00000046988) ENSHHUG00000046987 GDAP1L1 (ENSHHUG00000046977) fitm2 (ENSHHUG00000046972) R3HDML (ENSHHUG00000046968) hnf4a (ENSHHUG00000046902) ttpal (ENSHHUG00000046900) pkig (ENSHHUG00000046897) ada (ENSHHUG00000046856) ccn5 (ENSHHUG00000046846) ENSHHUG00000046841 pfkfb1 (ENSHHUG00000045619) ENSHHUG00000045459 gdi1 (ENSHHUG00000045410) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Percomorphaceae ANCESTRAL SPECIES 387 ENSGT00950000183165.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b Percomorphaceae_D ANCESTRAL SPECIES 80 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 Carangaria ANCESTRAL SPECIES 73 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 Pleuronectoidei ANCESTRAL SPECIES 157 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 Tongue sole MODERN SPECIES 1 ENSCSEG00000009885 pfkfb1 (ENSCSEG00000009829) ENSCSEG00000009816 ENSCSEG00000009804 ugt5e1 (ENSCSEG00000009801) ccn5 (ENSCSEG00000009789) ada (ENSCSEG00000009764) pkig (ENSCSEG00000009758) ttpal (ENSCSEG00000009750) hnf4a (ENSCSEG00000009708) fitm2 (ENSCSEG00000009699) GDAP1L1 (ENSCSEG00000009689) ENSCSEG00000009677 tuba1b (ENSCSEG00000009667) ENSCSEG00000009661 TUBA4B (ENSCSEG00000009654) #22 pmelb (ENSCSEG00000009638) ccnt1 (ENSCSEG00000009610) kansl2 (ENSCSEG00000009572) ENSCSEG00000009548 TMBIM6 (ENSCSEG00000009530) ctdsp2 (ENSCSEG00000009526) SLC11A2 (ENSCSEG00000009471) MARCHF9 (ENSCSEG00000009463) tspan31 (ENSCSEG00000009454) agap2 (ENSCSEG00000009387) gpr182 (ENSCSEG00000009374) ENSCSEG00000009369 ENSCSEG00000009357 igfbp6b (ENSCSEG00000009344) spryd3 (ENSCSEG00000009310) Eupercaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Eupecaria_B ANCESTRAL SPECIES 77 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00390000002944 ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Gilthead seabream MODERN SPECIES 21 ormdl2 (ENSSAUG00010011802) nemp1 (ENSSAUG00010011798) cd63 (ENSSAUG00010011797) letmd1 (ENSSAUG00010011791) zgc:56699 (ENSSAUG00010011789) nr4a1 (ENSSAUG00010011787) tamalin (ENSSAUG00010011779) dgkaa (ENSSAUG00010009293) rnf41 (ENSSAUG00010009251) ankrd52a (ENSSAUG00010008730) ENSSAUG00010008712 ##21 tuba1a (ENSSAUG00010008710) pmelb (ENSSAUG00010008705) sarnp (ENSSAUG00010008698) ENSSAUG00010008697 ##21 ENSSAUG00010008695 #22 ENSSAUG00010008690 #22 TUBA4B (ENSSAUG00010008679) #22 jph2 (ENSSAUG00010008678) GDAP1L1 (ENSSAUG00010008676) fitm2 (ENSSAUG00010008674) R3HDML (ENSSAUG00010008670) hnf4a (ENSSAUG00010008665) ttpal (ENSSAUG00010008662) pkig (ENSSAUG00010008661) ada (ENSSAUG00010008446) ccn5 (ENSSAUG00010008438) ENSSAUG00010008437 ENSSAUG00010008435 ENSSAUG00010008434 ENSSAUG00010008432 Perciformes ANCESTRAL SPECIES 165 ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Perciformes_a ANCESTRAL SPECIES 299 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.a.b.b #22 Pike perch MODERN SPECIES 103 gpr182 (ENSSLUG00000024703) ZBTB39 (ENSSLUG00000024706) agap2 (ENSSLUG00000024722) tspan31 (ENSSLUG00000024752) MARCHF9 (ENSSLUG00000024754) SLC11A2 (ENSSLUG00000001755) ctdsp2 (ENSSLUG00000002138) TMBIM6 (ENSSLUG00000002156) ENSSLUG00000002179 kansl2 (ENSSLUG00000002197) ccnt1 (ENSSLUG00000002225) sarnp (ENSSLUG00000002239) pmelb (ENSSLUG00000002252) tuba1c (ENSSLUG00000002293) ENSSLUG00000002305 #22 ENSSLUG00000002329 #22 ENSSLUG00000002336 #22 TUBA4B (ENSSLUG00000002342) #22 ENSSLUG00000002351 ##22 jph2 (ENSSLUG00000002353) GDAP1L1 (ENSSLUG00000002357) fitm2 (ENSSLUG00000002359) R3HDML (ENSSLUG00000002362) hnf4a (ENSSLUG00000002372) ttpal (ENSSLUG00000002394) pkig (ENSSLUG00000002403) ada (ENSSLUG00000002481) ccn5 (ENSSLUG00000002859) ENSSLUG00000002861 ENSSLUG00000002866 Cottioidei ANCESTRAL SPECIES 159 ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Lumpfish MODERN SPECIES 22 CABLES2 (ENSCLMG00005014649) ENSCLMG00005014648 CCM2L (ENSCLMG00005014645) xkr7b (ENSCLMG00005014644) SOX18 (ENSCLMG00005014635) tcea2 (ENSCLMG00005014564) rgs19 (ENSCLMG00005014561) FAM187A (ENSCLMG00005014560) oprl1 (ENSCLMG00005014558) NPBWR2 (ENSCLMG00005014557) ENSCLMG00005014556 RAB29 (ENSCLMG00005014555) cry3a (ENSCLMG00005014554) rps21 (ENSCLMG00005014552) ENSCLMG00005014551 ##21 ENSCLMG00005014549 #22 lama5 (ENSCLMG00005014543) adrm1 (ENSCLMG00005014536) ADRM1 (ENSCLMG00005014534) ADRM1 (ENSCLMG00005014504) DNAJC5 (ENSCLMG00005014500) trim101 (ENSCLMG00005014498) tpd52l2b (ENSCLMG00005014496) ppdpfb (ENSCLMG00005014495) ptk6b (ENSCLMG00005014494) ENSCLMG00005014492 nol4lb (ENSCLMG00005014491) commd7 (ENSCLMG00005014490) dnmt3bb.1 (ENSCLMG00005012506) dnmt3bb.2 (ENSCLMG00005012232) mapre1b (ENSCLMG00005012230) Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.b.b.b ##21 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Cichlidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 P. nyererei MODERN SPECIES 754 pak1 (ENSPNYG00000017957) ENSPNYG00000017940 #22 ENSPNYG00000017913 myo7aa (ENSPNYG00000017768) flot2b (ENSPNYG00000017721) FAM222B (ENSPNYG00000017716) Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00950000182835.c.c.g.b ENSGT00940000155094.b.x.b ENSGT00940000166720 ENSGT00940000155094.b.w ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Cyprinodontiformes ANCESTRAL SPECIES 130 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Turquoise killifish MODERN SPECIES 1624 lhfpl5b (ENSNFUG00015023161) CPNE5 (ENSNFUG00015023021) dclre1b (ENSNFUG00015023000) ENSNFUG00015022999 adora1b (ENSNFUG00015022998) mmp9 (ENSNFUG00015022858) ZNF335 (ENSNFUG00015022709) ENSNFUG00015022697 PROK1 (ENSNFUG00015022690) lamtor5 (ENSNFUG00015022689) SLC16A4 (ENSNFUG00015022684) RBM15 (ENSNFUG00015022683) ALX3 (ENSNFUG00015022679) ENSNFUG00015022676 slc6a17 (ENSNFUG00015022669) ENSNFUG00015022660 #22 KCNC4 (ENSNFUG00015022655) ENSNFUG00015022652 ENSNFUG00015022650 ENSNFUG00015022648 ahcyl1 (ENSNFUG00015022460) nfyal (ENSNFUG00015022433) ngrn (ENSNFUG00015022428) SORT1B (ENSNFUG00015022402) SYPL2B (ENSNFUG00015022396) AMIGO1 (ENSNFUG00015022395) GPR61 (ENSNFUG00015022394) gnai3 (ENSNFUG00015022390) gnat2 (ENSNFUG00015022385) GSTM3 (ENSNFUG00015022304) GSTM3 (ENSNFUG00015022289) Cyprinodontoidei ANCESTRAL SPECIES 174 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 NAME_4 ANCESTRAL SPECIES 544 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.a.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b #22 Mummichog MODERN SPECIES 797 arfip2b (ENSFHEG00000011111) fhdc3 (ENSFHEG00000011175) trim3b (ENSFHEG00000011383) ENSFHEG00000011424 ENSFHEG00000011433 #22 trim47 (ENSFHEG00000011466) ENSFHEG00000011486 Oryzias ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Oryzias_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Javanese ricefish MODERN SPECIES 21 ENSOJAG00000000748 acss2 (ENSOJAG00000000533) tafazzin (ENSOJAG00000000467) atp6ap1a (ENSOJAG00000000456) ENSOJAG00000000442 ENSOJAG00000000437 ada (ENSOJAG00000000407) ENSOJAG00000000385 ttpal (ENSOJAG00000000370) hnf4a (ENSOJAG00000000335) R3HDML (ENSOJAG00000000270) fitm2 (ENSOJAG00000000255) GDAP1L1 (ENSOJAG00000000247) jph2 (ENSOJAG00000000238) ENSOJAG00000000216 ENSOJAG00000000139 #22 pmelb (ENSOJAG00000000094) sarnp (ENSOJAG00000000076) ccnt1 (ENSOJAG00000017071) kansl2 (ENSOJAG00000017036) ENSOJAG00000016993 TMBIM6 (ENSOJAG00000016960) ctdsp2 (ENSOJAG00000016915) SLC11A2 (ENSOJAG00000015270) MARCHF9 (ENSOJAG00000015235) tspan31 (ENSOJAG00000015209) agap2 (ENSOJAG00000014437) gpr182 (ENSOJAG00000014395) ZBTB39 (ENSOJAG00000014387) ENSOJAG00000013820 igfbp6b (ENSOJAG00000013754) Oryzias_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b #22 Japanese Medaka HdrR MODERN SPECIES 22 ENSORLG00000022907 ELOF1 (ENSORLG00000016547) CNN1 (ENSORLG00000016543) tlcd4b (ENSORLG00000024397) plppr2a (ENSORLG00000016517) ENSORLG00000025698 nfil3-6 (ENSORLG00000016487) ENSORLG00000022104 ENSORLG00000016476 ENSORLG00000027093 ENSORLG00000016438 gcdhb (ENSORLG00000016423) ENSORLG00000016414 farsa (ENSORLG00000016406) ilf3b (ENSORLG00000016379) ENSORLG00000022416 #22 ptger1b (ENSORLG00000016366) ENSORLG00000023912 pglyrp6 (ENSORLG00000016356) trappc5 (ENSORLG00000025442) ENSORLG00000016346 ENSORLG00000030221 ENSORLG00000022678 pkn1b (ENSORLG00000016312) ENSORLG00000016288 ENSORLG00000026263 ENSORLG00000016274 trir (ENSORLG00000016259) ubn2b (ENSORLG00000016256) rpsa (ENSORLG00000016251) slc25a38a (ENSORLG00000016238) Clupeocephala ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Otomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Otophysi ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Zebrafish MODERN SPECIES 2 rpn1 (ENSDARG00000059323) gata2a (ENSDARG00000059327) ENSDARG00000055053 itih3a.1 (ENSDARG00000055036) DNAJC16 (ENSDARG00000060725) cdab (ENSDARG00000038199) ENSDARG00000055014 ENSDARG00000055011 camk2n1 (ENSDARG00000101387) ENSDARG00000115782 ddx19b (ENSDARG00000005699) ENSDARG00000074565 acap3b (ENSDARG00000099240) mcrs1 (ENSDARG00000020840) suox (ENSDARG00000091574) tuba2 (ENSDARG00000045014) #22 prph (ENSDARG00000028306) sarnp (ENSDARG00000059357) cdk2 (ENSDARG00000026577) MMP19 (ENSDARG00000091557) pmela (ENSDARG00000091298) timeless (ENSDARG00000078497) cpne5b (ENSDARG00000070919) KIF21B (ENSDARG00000009733) LHFPL5 (ENSDARG00000045023) srpk1b (ENSDARG00000031560) mapk14b (ENSDARG00000028721) tmem167b (ENSDARG00000059400) ENSDARG00000059399 b3galt6 (ENSDARG00000038414) ENSDARG00000077095 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00950000182835.c.c.g.b ENSGT00940000166720.d ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.a.b.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a ENSGT00950000183188.A.a.b ENSGT00390000002944.d ENSGT00940000159544.i ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a.g.b ENSGT01040000240451.a.b.a.b.b ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351.e ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D Salmoninae ANCESTRAL SPECIES 195 ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h ENSGT00940000160528.b.c Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000156650.i.f ENSGT00950000182994.B.a.a.a.e ENSGT00940000162980.l ENSGT00950000182835.c.c.g.b.h ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h ENSGT00940000160528.b.c Rainbow trout MODERN SPECIES 7 pfkfb1 (ENSOMYG00000005551) ENSOMYG00000005069 ENSOMYG00000005058 ccn5 (ENSOMYG00000063206) ada (ENSOMYG00000029961) pkig (ENSOMYG00000057036) ttpal (ENSOMYG00000029824) hnf4a (ENSOMYG00000029797) R3HDML (ENSOMYG00000029696) ENSOMYG00000053421 fitm2 (ENSOMYG00000029625) GDAP1L1 (ENSOMYG00000029604) jph2 (ENSOMYG00000029589) ENSOMYG00000029529 ENSOMYG00000016539 ENSOMYG00000029574 #22 ENSOMYG00000029476 ENSOMYG00000029422 ENSOMYG00000029334 ENSOMYG00000029319 kansl2 (ENSOMYG00000029305) ENSOMYG00000029234 ENSOMYG00000029153 ctdsp2 (ENSOMYG00000029051) ENSOMYG00000028951 MARCHF9 (ENSOMYG00000075892) tspan31 (ENSOMYG00000028828) agap2 (ENSOMYG00000028725) ENSOMYG00000028608 gpr182 (ENSOMYG00000028600) ENSOMYG00000027613 Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000156650.i.f ENSGT00950000182994.B.a.a.a.e ENSGT00940000162980.l ENSGT00950000182835.c.c.g.b.h ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h ENSGT00940000160528.b.c Coho salmon MODERN SPECIES 16 ENSOKIG00005018763 pfkfb1 (ENSOKIG00005014506) ENSOKIG00005014338 ENSOKIG00005014328 ccn5 (ENSOKIG00005014325) ada (ENSOKIG00005014057) pkig (ENSOKIG00005014024) ttpal (ENSOKIG00005014006) hnf4a (ENSOKIG00005013923) R3HDML (ENSOKIG00005013912) fitm2 (ENSOKIG00005013908) ENSOKIG00005013899 jph2 (ENSOKIG00005013893) ENSOKIG00005013875 #22 ENSOKIG00005013854 ENSOKIG00005013819 #22 ENSOKIG00005013804 ENSOKIG00005013769 ccnt1 (ENSOKIG00005013752) ccnt1 (ENSOKIG00005013743) kansl2 (ENSOKIG00005013700) ENSOKIG00005013673 TMBIM6 (ENSOKIG00005013643) ctdsp2 (ENSOKIG00005013608) SLC11A2 (ENSOKIG00005012522) MARCHF9 (ENSOKIG00005012450) tspan31 (ENSOKIG00005012433) agap2 (ENSOKIG00005012353) ZBTB39 (ENSOKIG00005012335) gpr182 (ENSOKIG00005012327) ENSOKIG00005012272 Huchen MODERN SPECIES 243 pfkfb1 (ENSHHUG00000045619) ENSHHUG00000046841 ccn5 (ENSHHUG00000046846) ada (ENSHHUG00000046856) pkig (ENSHHUG00000046897) ttpal (ENSHHUG00000046900) hnf4a (ENSHHUG00000046902) R3HDML (ENSHHUG00000046968) fitm2 (ENSHHUG00000046972) GDAP1L1 (ENSHHUG00000046977) ENSHHUG00000046987 jph2 (ENSHHUG00000046988) ENSHHUG00000046990 TUBA4B (ENSHHUG00000047002) #22 ENSHHUG00000047004 ##21 ENSHHUG00000047008 #22 pmelb (ENSHHUG00000047120) sarnp (ENSHHUG00000047137) ccnt1 (ENSHHUG00000047155) kansl2 (ENSHHUG00000047158) ENSHHUG00000047179 TMBIM6 (ENSHHUG00000047190) ctdsp2 (ENSHHUG00000047201) MARCHF9 (ENSHHUG00000047211) ENSHHUG00000047213 agap2 (ENSHHUG00000047216) ENSHHUG00000047267 gpr182 (ENSHHUG00000047269) ENSHHUG00000047271 igfbp6b (ENSHHUG00000047309) Northern pike MODERN SPECIES 11 ITIH6 (ENSELUG00000006309) pfkfb1 (ENSELUG00000006386) ENSELUG00000028739 ccn5 (ENSELUG00000006428) ENSELUG00000032073 ada (ENSELUG00000006483) pkig (ENSELUG00000006496) ttpal (ENSELUG00000006513) hnf4a (ENSELUG00000006558) R3HDML (ENSELUG00000006594) fitm2 (ENSELUG00000006611) GDAP1L1 (ENSELUG00000006637) jph2 (ENSELUG00000006661) ENSELUG00000013081 #22 ENSELUG00000006681 ENSELUG00000006694 #22 pmelb (ENSELUG00000006726) ENSELUG00000006786 ccnt1 (ENSELUG00000006814) ccnt1 (ENSELUG00000006830) kansl2 (ENSELUG00000000222) ENSELUG00000006909 TMBIM6 (ENSELUG00000006973) SLC11A2 (ENSELUG00000007018) ENSELUG00000007038 tspan31 (ENSELUG00000007060) agap2 (ENSELUG00000007107) ZBTB39 (ENSELUG00000007121) gpr182 (ENSELUG00000007136) ENSELUG00000007155 igfbp6b (ENSELUG00000007168) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Cichlidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Eastern happy MODERN SPECIES 12 SLC26A9 (ENSACLG00000022727) PAK6 (ENSACLG00000022687) ENSACLG00000022675 PLXNA2 (ENSACLG00000022581) ENSACLG00000022527 ENSACLG00000022488 ENSACLG00000022445 ptpn22 (ENSACLG00000022398) RSBN1 (ENSACLG00000022254) ENSACLG00000022207 ENSACLG00000022160 tmem269 (ENSACLG00000022135) ENSACLG00000022089 HSPG2 (ENSACLG00000020266) agmat (ENSACLG00000020177) ENSACLG00000019718 #22 pink1 (ENSACLG00000019688) ENSACLG00000019676 ENSACLG00000019066 fam43b (ENSACLG00000019029) ENSACLG00000019022 mul1b (ENSACLG00000019015) ENSACLG00000018999 VWA5B1 (ENSACLG00000018969) ubxn10 (ENSACLG00000018960) ddx19a (ENSACLG00000018912) cptp (ENSACLG00000018875) ints11 (ENSACLG00000018782) ENSACLG00000018758 ENSACLG00000018732 ACAP3 (ENSACLG00000018556) P. nyererei MODERN SPECIES 401 tmem269 (ENSPNYG00000019932) HSPG2 (ENSPNYG00000019971) ENSPNYG00000020188 agmat (ENSPNYG00000020421) tuba2 (ENSPNYG00000020451) #22 pink1 (ENSPNYG00000020461) ENSPNYG00000020469 ENSPNYG00000020577 fam43b (ENSPNYG00000021058) ENSPNYG00000021069 mul1b (ENSPNYG00000021079) VWA5B1 (ENSPNYG00000021106) ddx19a (ENSPNYG00000021160) ENSPNYG00000021190 ubxn10 (ENSPNYG00000021216) ints11 (ENSPNYG00000021238) cptp (ENSPNYG00000021273) ENSPNYG00000021281 ENSPNYG00000021292 ACAP3 (ENSPNYG00000021321) Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Oryzias ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000154169.B ENSGT00940000156670 ENSGT00940000154417.c ENSGT00940000176954 ENSGT00940000165549 ENSGT00940000157644 ENSGT01100000263537.b.a.a.a.b ENSGT00940000158938 ENSGT00390000012141.b ENSGT00940000176941 ENSGT00940000162826 ENSGT01050000244971.B.b ENSGT01050000244971.A.d.a.b ENSGT00390000001206 ENSGT00950000183195.a ENSGT00940000154457.a.a.b #22 ENSGT00940000156199.a.b ENSGT00940000155356.c ENSGT01010000222360.B ENSGT00940000158083.a ENSGT00940000157665.a ENSGT00940000158631 ENSGT00940000158981 ENSGT00940000153668.A ENSGT00510000046843.a.b ENSGT00950000183003.a.b ENSGT00940000165935 ENSGT00940000166581 ENSGT00940000165811 ENSGT00940000159728 ENSGT00950000182932.C.b Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000022816 ENSORLG00000027246 ddx19a (ENSORLG00000015931) ENSORLG00000029225 cptp (ENSORLG00000015937) ints11 (ENSORLG00000015957) ENSORLG00000015962 VWA5B1 (ENSORLG00000015968) mul1b (ENSORLG00000023666) ENSORLG00000022013 fam43b (ENSORLG00000015977) ENSORLG00000028395 ENSORLG00000016000 pink1 (ENSORLG00000016007) agmat (ENSORLG00000016013) ENSORLG00000016016 #22 ENSORLG00000016028 ENSORLG00000016039 sdf4 (ENSORLG00000016056) c1qtnf12 (ENSORLG00000016058) ENSORLG00000028075 olfml3a (ENSORLG00000016063) SYT6 (ENSORLG00000016069) ENSORLG00000029457 klhl21 (ENSORLG00000019357) ZBTB48 (ENSORLG00000019331) NOL9 (ENSORLG00000025184) PLEKHG5 (ENSORLG00000019281) ENSORLG00000027296 irx7 (ENSORLG00000030275) cd40 (ENSORLG00000026270) Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 103 tmem269 (ENSOSIG00000015972) ENSOSIG00000016041 ddx19a (ENSOSIG00000016045) ENSOSIG00000016046 cptp (ENSOSIG00000016047) ints11 (ENSOSIG00000016051) ENSOSIG00000016054 VWA5B1 (ENSOSIG00000016055) mul1b (ENSOSIG00000016056) ENSOSIG00000016057 fam43b (ENSOSIG00000016058) ENSOSIG00000016060 ENSOSIG00000016061 pink1 (ENSOSIG00000016064) agmat (ENSOSIG00000016066) TUBA4B (ENSOSIG00000016069) #22 ACAP3 (ENSOSIG00000016143) HIPK1 (ENSOSIG00000020675) sdf4 (ENSOSIG00000020690) c1qtnf12 (ENSOSIG00000020691) SYT6 (ENSOSIG00000020692) klhl21 (ENSOSIG00000020693) ZBTB48 (ENSOSIG00000020694) NOL9 (ENSOSIG00000020695) PLEKHG5 (ENSOSIG00000020701) ENSOSIG00000020705 irx7 (ENSOSIG00000020707) cd40 (ENSOSIG00000020709) ENSOSIG00000020716 ENSOSIG00000020725 PFDN4 (ENSOSIG00000020727) Chinese medaka MODERN SPECIES 400 epor (ENSOSIG00000016865) rab3db (ENSOSIG00000016862) ELOF1 (ENSOSIG00000016858) CNN1 (ENSOSIG00000016854) tlcd4b (ENSOSIG00000016853) tmem205 (ENSOSIG00000016852) plppr2a (ENSOSIG00000016851) nfil3-6 (ENSOSIG00000016849) ENSOSIG00000016847 ENSOSIG00000016845 ENSOSIG00000016842 SLC44A2 (ENSOSIG00000016755) gcdhb (ENSOSIG00000016736) farsa (ENSOSIG00000016701) ilf3b (ENSOSIG00000016678) ENSOSIG00000016667 #22 ptger1b (ENSOSIG00000016665) ENSOSIG00000016664 ENSOSIG00000016663 pglyrp6 (ENSOSIG00000016564) trappc5 (ENSOSIG00000016551) MCOLN1 (ENSOSIG00000016548) ENSOSIG00000016544 pkn1b (ENSOSIG00000014447) ENSOSIG00000014431 trir (ENSOSIG00000014430) ubn2b (ENSOSIG00000014428) rpsa (ENSOSIG00000014424) slc25a38a (ENSOSIG00000014419) MYH9 (ENSOSIG00000008234) txn2 (ENSOSIG00000008194) Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Poeciliinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Platyfish MODERN SPECIES slc48a1a (ENSXMAG00000025011) PLXNA2 (ENSXMAG00000012159) ENSXMAG00000024169 ENSXMAG00000028240 ENSXMAG00000007199 ENSXMAG00000022749 ENSXMAG00000024774 ENSXMAG00000027751 ENSXMAG00000026345 RSBN1 (ENSXMAG00000012327) MAGI3 (ENSXMAG00000021151) tmem269 (ENSXMAG00000024776) HSPG2 (ENSXMAG00000012335) ENSXMAG00000028421 agmat (ENSXMAG00000012356) ENSXMAG00000027485 #22 pink1 (ENSXMAG00000012373) ENSXMAG00000027225 ENSXMAG00000012410 fam43b (ENSXMAG00000019790) ENSXMAG00000022596 mul1b (ENSXMAG00000012421) VWA5B1 (ENSXMAG00000012428) ddx19a (ENSXMAG00000012440) ENSXMAG00000022729 ubxn10 (ENSXMAG00000027375) cptp (ENSXMAG00000012455) ints11 (ENSXMAG00000012456) ENSXMAG00000012471 ENSXMAG00000026940 ACAP3 (ENSXMAG00000012472) Aplocheiloidei ANCESTRAL SPECIES 41 ENSGT00940000158061.a ENSGT00940000159931 ENSGT00390000002307.e ENSGT00390000003023 ENSGT01050000244850.C.b.u.a ENSGT00390000008414.h ENSGT00940000154967.a.a.b.k.a ENSGT00940000163310.k.a ENSGT00990000203957 ENSGT00940000167346 ENSGT00390000001969.a ENSGT00940000156496.a.b ENSGT00940000154169.B ENSGT00940000156670 ENSGT00950000183195.a ENSGT00940000154457.a.a.b #22 ENSGT00390000001206 ENSGT01050000244971.A.d.a.b ENSGT01050000244971.B.b ENSGT00940000162826 ENSGT00940000176941 ENSGT00390000012141.b ENSGT00940000158938 ENSGT00940000176954 ENSGT00940000154417.c ENSGT00390000012939 ENSGT00940000165549 ENSGT00940000157644 ENSGT01100000263537.b.a.a.a.b ENSGT00940000156199.a.b ENSGT00940000155356.c Mangrove rivulus MODERN SPECIES 283 ctdsp2 (ENSKMAG00000013173) TMBIM6 (ENSKMAG00000013210) ENSKMAG00000013253 kansl2 (ENSKMAG00000013294) ccnt1 (ENSKMAG00000013385) sarnp (ENSKMAG00000013400) pmelb (ENSKMAG00000013415) tuba1c (ENSKMAG00000013445) TUBA4B (ENSKMAG00000013459) #22 jph2 (ENSKMAG00000013473) GDAP1L1 (ENSKMAG00000013492) fitm2 (ENSKMAG00000013523) hnf4a (ENSKMAG00000013544) ENSKMAG00000013568 ttpal (ENSKMAG00000013590) pkig (ENSKMAG00000013607) ada (ENSKMAG00000013626) ccn5 (ENSKMAG00000013648) ENSKMAG00000013664 ENSKMAG00000013676 Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1624 RAPGEF3 (ENSNFUG00015010854) SLC48A1A (ENSNFUG00015010763) ENSNFUG00015010757 ENSNFUG00015010754 PLXNA2 (ENSNFUG00015007792) Nfu_g_1_001977 (ENSNFUG00015007582) CD55 (ENSNFUG00015007578) Nfu_g_1_001907 (ENSNFUG00015007558) ENSNFUG00015007538 ENSNFUG00015007527 RSBN1 (ENSNFUG00015007522) MAGI3 (ENSNFUG00015007511) tmem269 (ENSNFUG00015007493) ENSNFUG00015007490 AGMAT (ENSNFUG00015006872) ENSNFUG00015006860 #22 PINK1 (ENSNFUG00015006854) ENSNFUG00015006847 ENSNFUG00015006842 fam43b (ENSNFUG00015006840) ENSNFUG00015006837 MUL1B (ENSNFUG00015006834) VWA5B1 (ENSNFUG00015006831) ENSNFUG00015006826 ddx19a (ENSNFUG00015006814) GLTPD1 (ENSNFUG00015006808) CPSF3L (ENSNFUG00015006339) ENSNFUG00015006294 TNPO1 (ENSNFUG00015006172) fcho2 (ENSNFUG00015005321) TMEM174 (ENSNFUG00015005119) Turquoise killifish MODERN SPECIES 1537 ENSNFUG00015013544 #22 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Eupercaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Fugu MODERN SPECIES 15 ACAP3 (ENSTRUG00000004785) ENSTRUG00000005476 ints11 (ENSTRUG00000005523) cptp (ENSTRUG00000005919) ENSTRUG00000025440 VWA5B1 (ENSTRUG00000006799) mul1b (ENSTRUG00000007255) ENSTRUG00000020982 fam43b (ENSTRUG00000020184) ENSTRUG00000007331 ENSTRUG00000007909 pink1 (ENSTRUG00000008101) agmat (ENSTRUG00000008312) HSPG2 (ENSTRUG00000008424) tmem269 (ENSTRUG00000026025) ENSTRUG00000003526 #22 tuba1b (ENSTRUG00000000693) tuba1c (ENSTRUG00000025128) pmelb (ENSTRUG00000030062) sarnp (ENSTRUG00000009497) jph2 (ENSTRUG00000009664) GDAP1L1 (ENSTRUG00000009791) hnf4a (ENSTRUG00000029889) ttpal (ENSTRUG00000010137) ada (ENSTRUG00000027623) fitm2 (ENSTRUG00000029484) hnf4a (ENSTRUG00000028089) ttpal (ENSTRUG00000032670) pkig (ENSTRUG00000033016) ccn5 (ENSTRUG00000010386) ENSTRUG00000026740 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Ballan wrasse MODERN SPECIES 248 PLXNA2 (ENSLBEG00000017308) ENSLBEG00000017404 ENSLBEG00000017439 ENSLBEG00000017526 ENSLBEG00000017578 ptpn22 (ENSLBEG00000017611) ENSLBEG00000017652 ENSLBEG00000017692 ENSLBEG00000017732 tmem269 (ENSLBEG00000017761) HSPG2 (ENSLBEG00000017849) agmat (ENSLBEG00000018178) ENSLBEG00000018221 #22 pink1 (ENSLBEG00000018244) ENSLBEG00000018275 ENSLBEG00000018522 ENSLBEG00000018960 fam43b (ENSLBEG00000018975) mul1b (ENSLBEG00000019007) mul1b (ENSLBEG00000019134) Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.a.f ##21 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Perciformes ANCESTRAL SPECIES 4 ENSGT00940000159931 ENSGT00390000002307.e ENSGT01100000263544.c.a.b.b ENSGT00390000003023 ENSGT01050000244850.C.b.u.a ENSGT00390000008414.h ENSGT00940000154967.a.a.b ENSGT00990000203957 ENSGT00940000167346 ENSGT00990000204522 ENSGT00390000001969.a ENSGT00940000156496.a.b ENSGT00940000154169.B ENSGT00940000156670 ENSGT00950000183195.a ENSGT00940000154457.a.a.b #22 ENSGT00390000001206 ENSGT01050000244971.A.d.a.b ENSGT01050000244971.B.b ENSGT00940000162826 ENSGT00940000176941 ENSGT00390000012141.b ENSGT00940000158938 ENSGT00940000154417.c ENSGT00940000176954 ENSGT00390000012939 ENSGT00940000165549 ENSGT00940000157644 ENSGT01100000263537.b.a.a.a.b ENSGT00950000183205.b.b ENSGT00940000156199.a.b Perciformes_a ANCESTRAL SPECIES 2 ENSGT00950000183072.b.a ENSGT00940000158061.a ENSGT00940000159931 ENSGT00390000002307.e ENSGT01100000263544.c.a.b.b ENSGT01050000244850.C.b.u.a ENSGT00390000008414.h ENSGT00940000163310.k.a ENSGT00990000203957 ENSGT00940000167346 ENSGT00390000001969.a ENSGT00940000156496.a.b ENSGT00940000154169.B ENSGT00940000156670 ENSGT00950000183195.a ENSGT00940000154457.a.a.b #22 ENSGT00390000001206 ENSGT01050000244971.A.d.a.b ENSGT01050000244971.B.b ENSGT00940000162826 ENSGT00940000176941 ENSGT00390000012141.b ENSGT00940000154417.c ENSGT00940000176954 ENSGT00390000012939 ENSGT00940000165549 ENSGT00940000157644 ENSGT01100000263537.b.a.a.a.b ENSGT00940000156199.a.b ENSGT00940000155356.c ENSGT01010000222360.B Pike perch MODERN SPECIES 84 slc48a1a (ENSSLUG00000023464) SLC26A9 (ENSSLUG00000023470) PLXNA2 (ENSSLUG00000002137) ENSSLUG00000007164 ENSSLUG00000007169 ENSSLUG00000007187 ENSSLUG00000007206 ENSSLUG00000007224 ENSSLUG00000007232 ENSSLUG00000007237 RSBN1 (ENSSLUG00000007252) MAGI3 (ENSSLUG00000007276) tmem269 (ENSSLUG00000007298) HSPG2 (ENSSLUG00000007598) agmat (ENSSLUG00000011498) ENSSLUG00000011510 #22 pink1 (ENSSLUG00000011518) ENSSLUG00000011524 ENSSLUG00000011535 fam43b (ENSSLUG00000011564) ENSSLUG00000011570 mul1b (ENSSLUG00000011576) ddx19a (ENSSLUG00000011605) ENSSLUG00000011905 ubxn10 (ENSSLUG00000011909) cptp (ENSSLUG00000011912) ints11 (ENSSLUG00000011957) ENSSLUG00000012019 ACAP3 (ENSSLUG00000012120) HIPK1 (ENSSLUG00000013815) sdf4 (ENSSLUG00000014148) Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00390000002944 ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ##21 ENSGT00940000154457.a.a.a.b.b #22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00390000002944 ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 Large yellow croaker MODERN SPECIES 487 ENSLCRG00005021001 ENSLCRG00005021002 ENSLCRG00005021003 ccn5 (ENSLCRG00005021005) ada (ENSLCRG00005021007) pkig (ENSLCRG00005021024) ttpal (ENSLCRG00005000764) hnf4a (ENSLCRG00005000797) GDAP1L1 (ENSLCRG00005001119) fitm2 (ENSLCRG00005001123) jph2 (ENSLCRG00005001125) tuba1b (ENSLCRG00005001131) sarnp (ENSLCRG00005001134) pmelb (ENSLCRG00005001137) ENSLCRG00005001139 ENSLCRG00005001154 #22 ENSLCRG00005001233 pink1 (ENSLCRG00005001235) ENSLCRG00005001236 ENSLCRG00005001239 ENSLCRG00005001242 fam43b (ENSLCRG00005001243) mul1b (ENSLCRG00005001246) VWA5B1 (ENSLCRG00005001248) ddx19a (ENSLCRG00005001251) ENSLCRG00005001257 ubxn10 (ENSLCRG00005001259) cptp (ENSLCRG00005001260) ints11 (ENSLCRG00005001265) ENSLCRG00005001286 ACAP3 (ENSLCRG00005001371) European seabass MODERN SPECIES 14 ENSDLAG00005031943 ENSDLAG00005011920 ENSDLAG00005011929 ENSDLAG00005011908 ENSDLAG00005033417 ENSDLAG00005011902 ccn5 (ENSDLAG00005029828) ada (ENSDLAG00005011542) pkig (ENSDLAG00005031596) hnf4a (ENSDLAG00005011382) R3HDML (ENSDLAG00005026691) GDAP1L1 (ENSDLAG00005027572) jph2 (ENSDLAG00005032600) FITM2 (ENSDLAG00005027250) ENSDLAG00005016315 ENSDLAG00005028924 #22 ENSDLAG00005011344 ENSDLAG00005011332 ENSDLAG00005008781 MAPRE1 (ENSDLAG00005035139) dnmt3bb.2 (ENSDLAG00005007129) ENSDLAG00005007070 dnmt3bb.1 (ENSDLAG00005003831) commd7 (ENSDLAG00005003715) ENSDLAG00005003678 nol4lb (ENSDLAG00005027718) ENSDLAG00005031972 ENSDLAG00005003663 ptk6b (ENSDLAG00005003644) ppdpfb (ENSDLAG00005003633) tpd52l2b (ENSDLAG00005003563)