Actinopterygii ANCESTRAL SPECIES 230 ENSGT00940000161997.b ENSGT00390000005536 ENSGT00390000001138.a ENSGT00390000003749 ENSGT00730000111107 ENSGT00940000158593 ENSGT00390000016940.c.a ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000183188.A.a ENSGT00940000159517 ENSGT00940000160756 Neopterygii ANCESTRAL SPECIES 71 ENSGT00390000002174.a ENSGT00940000155637 ENSGT00950000183178.a ENSGT00390000013978.d ENSGT00940000156785 ENSGT00940000161997.b ENSGT00390000005536 ENSGT00390000001138.a ENSGT00390000003749 ENSGT00730000111107 ENSGT00940000158593 ENSGT00390000016940.c.a ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000183188.A.a ENSGT00940000159517 Osteoglossocephalai ANCESTRAL SPECIES 45 ENSGT00390000003749 ENSGT00940000158593.a ENSGT00390000016940.c.a.b ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a #22 ENSGT00950000182825.A.a.b.a.b.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000183188.A.a ENSGT00940000159517 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330.c ENSGT00940000161297 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000158208.a.b ENSGT00940000154770 ENSGT00940000160351 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Oryzias ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Oryzias_a ANCESTRAL SPECIES ENSGT00940000154169.B #7 ENSGT00940000156670 ENSGT00940000154417.c #9 ENSGT00940000176954 #10 ENSGT00940000165549 #11 ENSGT00940000157644 #12 ENSGT01100000263537.b.a.a.a.b #13 ENSGT00940000158938 #14 ENSGT00390000012141.b #15 ENSGT00940000176941 #16 ENSGT00940000162826 #17 ENSGT01050000244971.B.b #18 ENSGT01050000244971.A.d.a.b #19 ENSGT00390000001206 #20 ENSGT00950000183195.a #21 ENSGT00940000154457.a.a.b #22 ENSGT00940000156199.a.b #23 ENSGT00940000155356.c #24 ENSGT01010000222360.B #25 ENSGT00940000158083.a ENSGT00940000157665.a #27 ENSGT00940000158631 #28 ENSGT00940000158981 #29 ENSGT00940000153668.A #30 ENSGT00510000046843.a.b #31 ENSGT00950000183003.a.b #32 ENSGT00940000165935 #33 ENSGT00940000166581 #34 ENSGT00940000165811 #35 ENSGT00940000159728 ENSGT00950000182932.C.b #36 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 103 tmem269 (ENSOSIG00000015972) #7 ENSOSIG00000016041 #8 ddx19a (ENSOSIG00000016045) #9 ENSOSIG00000016046 #10 cptp (ENSOSIG00000016047) #11 ints11 (ENSOSIG00000016051) #12 ENSOSIG00000016054 #13 VWA5B1 (ENSOSIG00000016055) #14 mul1b (ENSOSIG00000016056) #15 ENSOSIG00000016057 #16 fam43b (ENSOSIG00000016058) #17 ENSOSIG00000016060 #18 ENSOSIG00000016061 #19 pink1 (ENSOSIG00000016064) #20 agmat (ENSOSIG00000016066) #21 TUBA4B (ENSOSIG00000016069) #22 ACAP3 (ENSOSIG00000016143) #23 HIPK1 (ENSOSIG00000020675) #24 sdf4 (ENSOSIG00000020690) #25 c1qtnf12 (ENSOSIG00000020691) #26 SYT6 (ENSOSIG00000020692) #27 klhl21 (ENSOSIG00000020693) #28 ZBTB48 (ENSOSIG00000020694) #29 NOL9 (ENSOSIG00000020695) #30 PLEKHG5 (ENSOSIG00000020701) #31 ENSOSIG00000020705 #32 irx7 (ENSOSIG00000020707) #33 cd40 (ENSOSIG00000020709) #34 ENSOSIG00000020716 #35 ENSOSIG00000020725 #36 PFDN4 (ENSOSIG00000020727) #37 Chinese medaka MODERN SPECIES 400 epor (ENSOSIG00000016865) rab3db (ENSOSIG00000016862) ELOF1 (ENSOSIG00000016858) CNN1 (ENSOSIG00000016854) tlcd4b (ENSOSIG00000016853) tmem205 (ENSOSIG00000016852) plppr2a (ENSOSIG00000016851) nfil3-6 (ENSOSIG00000016849) ENSOSIG00000016847 ENSOSIG00000016845 ENSOSIG00000016842 SLC44A2 (ENSOSIG00000016755) gcdhb (ENSOSIG00000016736) farsa (ENSOSIG00000016701) ilf3b (ENSOSIG00000016678) ENSOSIG00000016667 ##22 ptger1b (ENSOSIG00000016665) ENSOSIG00000016664 ENSOSIG00000016663 pglyrp6 (ENSOSIG00000016564) trappc5 (ENSOSIG00000016551) MCOLN1 (ENSOSIG00000016548) ENSOSIG00000016544 pkn1b (ENSOSIG00000014447) ENSOSIG00000014431 trir (ENSOSIG00000014430) ubn2b (ENSOSIG00000014428) rpsa (ENSOSIG00000014424) slc25a38a (ENSOSIG00000014419) MYH9 (ENSOSIG00000008234) txn2 (ENSOSIG00000008194) Japanese Medaka HdrR MODERN SPECIES 21 ENSORLG00000022816 ENSORLG00000027246 ddx19a (ENSORLG00000015931) #9 ENSORLG00000029225 #10 cptp (ENSORLG00000015937) #11 ints11 (ENSORLG00000015957) #12 ENSORLG00000015962 #13 VWA5B1 (ENSORLG00000015968) #14 mul1b (ENSORLG00000023666) #15 ENSORLG00000022013 #16 fam43b (ENSORLG00000015977) #17 ENSORLG00000028395 #18 ENSORLG00000016000 #19 pink1 (ENSORLG00000016007) #20 agmat (ENSORLG00000016013) #21 ENSORLG00000016016 #22 ENSORLG00000016028 #23 ENSORLG00000016039 #24 sdf4 (ENSORLG00000016056) #25 c1qtnf12 (ENSORLG00000016058) #26 ENSORLG00000028075 olfml3a (ENSORLG00000016063) SYT6 (ENSORLG00000016069) #27 ENSORLG00000029457 klhl21 (ENSORLG00000019357) #28 ZBTB48 (ENSORLG00000019331) #29 NOL9 (ENSORLG00000025184) #30 PLEKHG5 (ENSORLG00000019281) #31 ENSORLG00000027296 #32 irx7 (ENSORLG00000030275) #33 cd40 (ENSORLG00000026270) #34 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Poeciliinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Platyfish MODERN SPECIES slc48a1a (ENSXMAG00000025011) PLXNA2 (ENSXMAG00000012159) ENSXMAG00000024169 ENSXMAG00000028240 ENSXMAG00000007199 ENSXMAG00000022749 ENSXMAG00000024774 ENSXMAG00000027751 ENSXMAG00000026345 RSBN1 (ENSXMAG00000012327) MAGI3 (ENSXMAG00000021151) tmem269 (ENSXMAG00000024776) #7 HSPG2 (ENSXMAG00000012335) ENSXMAG00000028421 agmat (ENSXMAG00000012356) #21 ENSXMAG00000027485 #22 pink1 (ENSXMAG00000012373) #20 ENSXMAG00000027225 #19 ENSXMAG00000012410 #18 fam43b (ENSXMAG00000019790) #17 ENSXMAG00000022596 #16 mul1b (ENSXMAG00000012421) #15 VWA5B1 (ENSXMAG00000012428) #14 ddx19a (ENSXMAG00000012440) #9 ENSXMAG00000022729 #10 ubxn10 (ENSXMAG00000027375) cptp (ENSXMAG00000012455) #11 ints11 (ENSXMAG00000012456) #12 ENSXMAG00000012471 #13 ENSXMAG00000026940 ACAP3 (ENSXMAG00000012472) #23 Aplocheiloidei ANCESTRAL SPECIES 41 ENSGT00940000158061.a ENSGT00940000159931 ENSGT00390000002307.e ENSGT00390000003023 ENSGT01050000244850.C.b.u.a ENSGT00390000008414.h ENSGT00940000154967.a.a.b.k.a ENSGT00940000163310.k.a ENSGT00990000203957 ENSGT00940000167346 ENSGT00390000001969.a ENSGT00940000156496.a.b ENSGT00940000154169.B #7 ENSGT00940000156670 ENSGT00950000183195.a #21 ENSGT00940000154457.a.a.b #22 ENSGT00390000001206 #20 ENSGT01050000244971.A.d.a.b #19 ENSGT01050000244971.B.b #18 ENSGT00940000162826 #17 ENSGT00940000176941 #16 ENSGT00390000012141.b #15 ENSGT00940000158938 #14 ENSGT00940000176954 #10 ENSGT00940000154417.c #9 ENSGT00390000012939 ENSGT00940000165549 #11 ENSGT00940000157644 #12 ENSGT01100000263537.b.a.a.a.b #13 ENSGT00940000156199.a.b #23 ENSGT00940000155356.c #24 Mangrove rivulus MODERN SPECIES 283 ctdsp2 (ENSKMAG00000013173) TMBIM6 (ENSKMAG00000013210) ENSKMAG00000013253 kansl2 (ENSKMAG00000013294) ccnt1 (ENSKMAG00000013385) sarnp (ENSKMAG00000013400) pmelb (ENSKMAG00000013415) tuba1c (ENSKMAG00000013445) TUBA4B (ENSKMAG00000013459) #22 jph2 (ENSKMAG00000013473) GDAP1L1 (ENSKMAG00000013492) fitm2 (ENSKMAG00000013523) hnf4a (ENSKMAG00000013544) ENSKMAG00000013568 ttpal (ENSKMAG00000013590) pkig (ENSKMAG00000013607) ada (ENSKMAG00000013626) ccn5 (ENSKMAG00000013648) ENSKMAG00000013664 ENSKMAG00000013676 Turquoise killifish DUPLICATION Turquoise killifish MODERN SPECIES 1624 RAPGEF3 (ENSNFUG00015010854) SLC48A1A (ENSNFUG00015010763) ENSNFUG00015010757 ENSNFUG00015010754 PLXNA2 (ENSNFUG00015007792) Nfu_g_1_001977 (ENSNFUG00015007582) CD55 (ENSNFUG00015007578) Nfu_g_1_001907 (ENSNFUG00015007558) ENSNFUG00015007538 ENSNFUG00015007527 RSBN1 (ENSNFUG00015007522) MAGI3 (ENSNFUG00015007511) tmem269 (ENSNFUG00015007493) #7 ENSNFUG00015007490 AGMAT (ENSNFUG00015006872) #21 ENSNFUG00015006860 #22 PINK1 (ENSNFUG00015006854) #20 ENSNFUG00015006847 #19 ENSNFUG00015006842 #18 fam43b (ENSNFUG00015006840) #17 ENSNFUG00015006837 #16 MUL1B (ENSNFUG00015006834) #15 VWA5B1 (ENSNFUG00015006831) #14 ENSNFUG00015006826 #10 ddx19a (ENSNFUG00015006814) #9 GLTPD1 (ENSNFUG00015006808) #11 CPSF3L (ENSNFUG00015006339) #12 ENSNFUG00015006294 #13 TNPO1 (ENSNFUG00015006172) fcho2 (ENSNFUG00015005321) TMEM174 (ENSNFUG00015005119) Turquoise killifish MODERN SPECIES 1537 ENSNFUG00015013544 #22 Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Cichlidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Haplochromini ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Haplochromini_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Eastern happy MODERN SPECIES 12 SLC26A9 (ENSACLG00000022727) PAK6 (ENSACLG00000022687) ENSACLG00000022675 PLXNA2 (ENSACLG00000022581) ENSACLG00000022527 ENSACLG00000022488 ENSACLG00000022445 ptpn22 (ENSACLG00000022398) RSBN1 (ENSACLG00000022254) ENSACLG00000022207 ENSACLG00000022160 tmem269 (ENSACLG00000022135) #7 ENSACLG00000022089 HSPG2 (ENSACLG00000020266) agmat (ENSACLG00000020177) #21 ENSACLG00000019718 #22 pink1 (ENSACLG00000019688) #20 ENSACLG00000019676 #19 ENSACLG00000019066 #18 fam43b (ENSACLG00000019029) #17 ENSACLG00000019022 #16 mul1b (ENSACLG00000019015) #15 ENSACLG00000018999 VWA5B1 (ENSACLG00000018969) #14 ubxn10 (ENSACLG00000018960) ddx19a (ENSACLG00000018912) #9 cptp (ENSACLG00000018875) #11 ints11 (ENSACLG00000018782) #12 ENSACLG00000018758 #13 ENSACLG00000018732 ACAP3 (ENSACLG00000018556) #23 P. nyererei MODERN SPECIES 401 tmem269 (ENSPNYG00000019932) #7 HSPG2 (ENSPNYG00000019971) ENSPNYG00000020188 agmat (ENSPNYG00000020421) #21 tuba2 (ENSPNYG00000020451) #22 pink1 (ENSPNYG00000020461) #20 ENSPNYG00000020469 #19 ENSPNYG00000020577 #18 fam43b (ENSPNYG00000021058) #17 ENSPNYG00000021069 #16 mul1b (ENSPNYG00000021079) #15 VWA5B1 (ENSPNYG00000021106) #14 ddx19a (ENSPNYG00000021160) #9 ENSPNYG00000021190 #10 ubxn10 (ENSPNYG00000021216) ints11 (ENSPNYG00000021238) #12 cptp (ENSPNYG00000021273) #11 ENSPNYG00000021281 #13 ENSPNYG00000021292 ACAP3 (ENSPNYG00000021321) #23 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Eupercaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Tetraodontidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Fugu MODERN SPECIES 15 ACAP3 (ENSTRUG00000004785) #23 ENSTRUG00000005476 #13 ints11 (ENSTRUG00000005523) #12 cptp (ENSTRUG00000005919) #11 ENSTRUG00000025440 #10 VWA5B1 (ENSTRUG00000006799) #14 mul1b (ENSTRUG00000007255) #15 ENSTRUG00000020982 #16 fam43b (ENSTRUG00000020184) #17 ENSTRUG00000007331 #18 ENSTRUG00000007909 #19 pink1 (ENSTRUG00000008101) #20 agmat (ENSTRUG00000008312) #21 HSPG2 (ENSTRUG00000008424) tmem269 (ENSTRUG00000026025) #7 ENSTRUG00000003526 #22 tuba1b (ENSTRUG00000000693) tuba1c (ENSTRUG00000025128) pmelb (ENSTRUG00000030062) sarnp (ENSTRUG00000009497) jph2 (ENSTRUG00000009664) GDAP1L1 (ENSTRUG00000009791) hnf4a (ENSTRUG00000029889) ttpal (ENSTRUG00000010137) ada (ENSTRUG00000027623) fitm2 (ENSTRUG00000029484) hnf4a (ENSTRUG00000028089) ttpal (ENSTRUG00000032670) pkig (ENSTRUG00000033016) ccn5 (ENSTRUG00000010386) ENSTRUG00000026740 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Ballan wrasse MODERN SPECIES 248 PLXNA2 (ENSLBEG00000017308) ENSLBEG00000017404 ENSLBEG00000017439 ENSLBEG00000017526 ENSLBEG00000017578 ptpn22 (ENSLBEG00000017611) ENSLBEG00000017652 ENSLBEG00000017692 ENSLBEG00000017732 tmem269 (ENSLBEG00000017761) #7 HSPG2 (ENSLBEG00000017849) agmat (ENSLBEG00000018178) #21 ENSLBEG00000018221 #22 pink1 (ENSLBEG00000018244) #20 ENSLBEG00000018275 #19 ENSLBEG00000018522 #18 ENSLBEG00000018960 #16 fam43b (ENSLBEG00000018975) #17 mul1b (ENSLBEG00000019007) #15 mul1b (ENSLBEG00000019134) #15 Eupecaria_B ANCESTRAL SPECIES 5 ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.a.f ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Perciformes ANCESTRAL SPECIES 4 ENSGT00940000159931 ENSGT00390000002307.e ENSGT01100000263544.c.a.b.b ENSGT00390000003023 ENSGT01050000244850.C.b.u.a ENSGT00390000008414.h ENSGT00940000154967.a.a.b ENSGT00990000203957 ENSGT00940000167346 ENSGT00990000204522 ENSGT00390000001969.a ENSGT00940000156496.a.b ENSGT00940000154169.B #7 ENSGT00940000156670 ENSGT00950000183195.a #21 ENSGT00940000154457.a.a.b #22 ENSGT00390000001206 #20 ENSGT01050000244971.A.d.a.b #19 ENSGT01050000244971.B.b #18 ENSGT00940000162826 #17 ENSGT00940000176941 #16 ENSGT00390000012141.b #15 ENSGT00940000158938 #14 ENSGT00940000154417.c #9 ENSGT00940000176954 #10 ENSGT00390000012939 ENSGT00940000165549 #11 ENSGT00940000157644 #12 ENSGT01100000263537.b.a.a.a.b #13 ENSGT00950000183205.b.b ENSGT00940000156199.a.b #23 Perciformes_a ANCESTRAL SPECIES 2 ENSGT00950000183072.b.a ENSGT00940000158061.a ENSGT00940000159931 ENSGT00390000002307.e ENSGT01100000263544.c.a.b.b ENSGT01050000244850.C.b.u.a ENSGT00390000008414.h ENSGT00940000163310.k.a ENSGT00990000203957 ENSGT00940000167346 ENSGT00390000001969.a ENSGT00940000156496.a.b ENSGT00940000154169.B #7 ENSGT00940000156670 ENSGT00950000183195.a #21 ENSGT00940000154457.a.a.b #22 ENSGT00390000001206 #20 ENSGT01050000244971.A.d.a.b #19 ENSGT01050000244971.B.b #18 ENSGT00940000162826 #17 ENSGT00940000176941 #16 ENSGT00390000012141.b #15 ENSGT00940000154417.c #9 ENSGT00940000176954 #10 ENSGT00390000012939 ENSGT00940000165549 #11 ENSGT00940000157644 #12 ENSGT01100000263537.b.a.a.a.b #13 ENSGT00940000156199.a.b #23 ENSGT00940000155356.c #24 ENSGT01010000222360.B #25 Pike perch MODERN SPECIES 84 slc48a1a (ENSSLUG00000023464) SLC26A9 (ENSSLUG00000023470) PLXNA2 (ENSSLUG00000002137) ENSSLUG00000007164 ENSSLUG00000007169 ENSSLUG00000007187 ENSSLUG00000007206 ENSSLUG00000007224 ENSSLUG00000007232 ENSSLUG00000007237 RSBN1 (ENSSLUG00000007252) MAGI3 (ENSSLUG00000007276) tmem269 (ENSSLUG00000007298) #7 HSPG2 (ENSSLUG00000007598) agmat (ENSSLUG00000011498) #21 ENSSLUG00000011510 #22 pink1 (ENSSLUG00000011518) #20 ENSSLUG00000011524 #19 ENSSLUG00000011535 #18 fam43b (ENSSLUG00000011564) #17 ENSSLUG00000011570 #16 mul1b (ENSSLUG00000011576) #15 ddx19a (ENSSLUG00000011605) #9 ENSSLUG00000011905 #10 ubxn10 (ENSSLUG00000011909) cptp (ENSSLUG00000011912) #11 ints11 (ENSSLUG00000011957) #12 ENSSLUG00000012019 #13 ACAP3 (ENSSLUG00000012120) #23 HIPK1 (ENSSLUG00000013815) #24 sdf4 (ENSSLUG00000014148) #25 Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00390000002944 ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Eupercaria_incertae_sedis ANCESTRAL SPECIES 15 ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00390000002944 ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 Large yellow croaker MODERN SPECIES 487 ENSLCRG00005021001 ENSLCRG00005021002 ENSLCRG00005021003 ccn5 (ENSLCRG00005021005) ada (ENSLCRG00005021007) pkig (ENSLCRG00005021024) ttpal (ENSLCRG00005000764) hnf4a (ENSLCRG00005000797) GDAP1L1 (ENSLCRG00005001119) fitm2 (ENSLCRG00005001123) jph2 (ENSLCRG00005001125) tuba1b (ENSLCRG00005001131) sarnp (ENSLCRG00005001134) pmelb (ENSLCRG00005001137) ENSLCRG00005001139 ENSLCRG00005001154 #22 ENSLCRG00005001233 pink1 (ENSLCRG00005001235) #20 ENSLCRG00005001236 #19 ENSLCRG00005001239 #18 ENSLCRG00005001242 #16 fam43b (ENSLCRG00005001243) #17 mul1b (ENSLCRG00005001246) #15 VWA5B1 (ENSLCRG00005001248) #14 ddx19a (ENSLCRG00005001251) #9 ENSLCRG00005001257 #10 ubxn10 (ENSLCRG00005001259) cptp (ENSLCRG00005001260) #11 ints11 (ENSLCRG00005001265) #12 ENSLCRG00005001286 #13 ACAP3 (ENSLCRG00005001371) #23 European seabass MODERN SPECIES 14 ENSDLAG00005031943 ENSDLAG00005011920 ENSDLAG00005011929 ENSDLAG00005011908 ENSDLAG00005033417 ENSDLAG00005011902 ccn5 (ENSDLAG00005029828) ada (ENSDLAG00005011542) pkig (ENSDLAG00005031596) hnf4a (ENSDLAG00005011382) R3HDML (ENSDLAG00005026691) GDAP1L1 (ENSDLAG00005027572) jph2 (ENSDLAG00005032600) FITM2 (ENSDLAG00005027250) ENSDLAG00005016315 ENSDLAG00005028924 #22 ENSDLAG00005011344 ENSDLAG00005011332 ENSDLAG00005008781 MAPRE1 (ENSDLAG00005035139) dnmt3bb.2 (ENSDLAG00005007129) ENSDLAG00005007070 dnmt3bb.1 (ENSDLAG00005003831) commd7 (ENSDLAG00005003715) ENSDLAG00005003678 nol4lb (ENSDLAG00005027718) ENSDLAG00005031972 ENSDLAG00005003663 ptk6b (ENSDLAG00005003644) ppdpfb (ENSDLAG00005003633) tpd52l2b (ENSDLAG00005003563) Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00950000182835.c.c.g.b ENSGT00940000166720.d ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.a.b.a.a.b ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a ENSGT00950000183188.A.a.b ENSGT00390000002944.d ENSGT00940000159544.i ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a.g.b ENSGT01040000240451.a.b.a.b.b ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351.e ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D Salmoninae ANCESTRAL SPECIES 195 ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h ENSGT00940000160528.b.c Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Oncorhynchus ANCESTRAL SPECIES 7 ENSGT00940000156650.i.f ENSGT00950000182994.B.a.a.a.e ENSGT00940000162980.l ENSGT00950000182835.c.c.g.b.h ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h ENSGT00940000160528.b.c Rainbow trout MODERN SPECIES 7 pfkfb1 (ENSOMYG00000005551) ENSOMYG00000005069 ENSOMYG00000005058 ccn5 (ENSOMYG00000063206) ada (ENSOMYG00000029961) pkig (ENSOMYG00000057036) ttpal (ENSOMYG00000029824) hnf4a (ENSOMYG00000029797) R3HDML (ENSOMYG00000029696) ENSOMYG00000053421 fitm2 (ENSOMYG00000029625) GDAP1L1 (ENSOMYG00000029604) jph2 (ENSOMYG00000029589) ENSOMYG00000029529 ENSOMYG00000016539 ENSOMYG00000029574 #22 ENSOMYG00000029476 ENSOMYG00000029422 ENSOMYG00000029334 ENSOMYG00000029319 kansl2 (ENSOMYG00000029305) ENSOMYG00000029234 ENSOMYG00000029153 ctdsp2 (ENSOMYG00000029051) ENSOMYG00000028951 MARCHF9 (ENSOMYG00000075892) tspan31 (ENSOMYG00000028828) agap2 (ENSOMYG00000028725) ENSOMYG00000028608 gpr182 (ENSOMYG00000028600) ENSOMYG00000027613 Oncorhynchus_a ANCESTRAL SPECIES 9 ENSGT00940000156650.i.f ENSGT00950000182994.B.a.a.a.e ENSGT00940000162980.l ENSGT00950000182835.c.c.g.b.h ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h ENSGT00940000160528.b.c Coho salmon MODERN SPECIES 16 ENSOKIG00005018763 pfkfb1 (ENSOKIG00005014506) ENSOKIG00005014338 ENSOKIG00005014328 ccn5 (ENSOKIG00005014325) ada (ENSOKIG00005014057) pkig (ENSOKIG00005014024) ttpal (ENSOKIG00005014006) hnf4a (ENSOKIG00005013923) R3HDML (ENSOKIG00005013912) fitm2 (ENSOKIG00005013908) ENSOKIG00005013899 jph2 (ENSOKIG00005013893) ENSOKIG00005013875 ##22 ENSOKIG00005013854 ENSOKIG00005013819 #22 ENSOKIG00005013804 ENSOKIG00005013769 ccnt1 (ENSOKIG00005013752) ccnt1 (ENSOKIG00005013743) kansl2 (ENSOKIG00005013700) ENSOKIG00005013673 TMBIM6 (ENSOKIG00005013643) ctdsp2 (ENSOKIG00005013608) SLC11A2 (ENSOKIG00005012522) MARCHF9 (ENSOKIG00005012450) tspan31 (ENSOKIG00005012433) agap2 (ENSOKIG00005012353) ZBTB39 (ENSOKIG00005012335) gpr182 (ENSOKIG00005012327) ENSOKIG00005012272 Huchen MODERN SPECIES 243 pfkfb1 (ENSHHUG00000045619) ENSHHUG00000046841 ccn5 (ENSHHUG00000046846) ada (ENSHHUG00000046856) pkig (ENSHHUG00000046897) ttpal (ENSHHUG00000046900) hnf4a (ENSHHUG00000046902) R3HDML (ENSHHUG00000046968) fitm2 (ENSHHUG00000046972) GDAP1L1 (ENSHHUG00000046977) ENSHHUG00000046987 jph2 (ENSHHUG00000046988) ENSHHUG00000046990 TUBA4B (ENSHHUG00000047002) ##22 ENSHHUG00000047004 ENSHHUG00000047008 #22 pmelb (ENSHHUG00000047120) sarnp (ENSHHUG00000047137) ccnt1 (ENSHHUG00000047155) kansl2 (ENSHHUG00000047158) ENSHHUG00000047179 TMBIM6 (ENSHHUG00000047190) ctdsp2 (ENSHHUG00000047201) MARCHF9 (ENSHHUG00000047211) ENSHHUG00000047213 agap2 (ENSHHUG00000047216) ENSHHUG00000047267 gpr182 (ENSHHUG00000047269) ENSHHUG00000047271 igfbp6b (ENSHHUG00000047309) Northern pike MODERN SPECIES 11 ITIH6 (ENSELUG00000006309) pfkfb1 (ENSELUG00000006386) ENSELUG00000028739 ccn5 (ENSELUG00000006428) ENSELUG00000032073 ada (ENSELUG00000006483) pkig (ENSELUG00000006496) ttpal (ENSELUG00000006513) hnf4a (ENSELUG00000006558) R3HDML (ENSELUG00000006594) fitm2 (ENSELUG00000006611) GDAP1L1 (ENSELUG00000006637) jph2 (ENSELUG00000006661) ENSELUG00000013081 ##22 ENSELUG00000006681 ENSELUG00000006694 #22 pmelb (ENSELUG00000006726) ENSELUG00000006786 ccnt1 (ENSELUG00000006814) ccnt1 (ENSELUG00000006830) kansl2 (ENSELUG00000000222) ENSELUG00000006909 TMBIM6 (ENSELUG00000006973) SLC11A2 (ENSELUG00000007018) ENSELUG00000007038 tspan31 (ENSELUG00000007060) agap2 (ENSELUG00000007107) ZBTB39 (ENSELUG00000007121) gpr182 (ENSELUG00000007136) ENSELUG00000007155 igfbp6b (ENSELUG00000007168) Otomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Otophysi ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.b #22 Zebrafish MODERN SPECIES 2 rpn1 (ENSDARG00000059323) gata2a (ENSDARG00000059327) ENSDARG00000055053 itih3a.1 (ENSDARG00000055036) DNAJC16 (ENSDARG00000060725) cdab (ENSDARG00000038199) ENSDARG00000055014 ##19 ENSDARG00000055011 ##19 camk2n1 (ENSDARG00000101387) ENSDARG00000115782 ddx19b (ENSDARG00000005699) ##9 ENSDARG00000074565 acap3b (ENSDARG00000099240) ##23 mcrs1 (ENSDARG00000020840) suox (ENSDARG00000091574) tuba2 (ENSDARG00000045014) #22 prph (ENSDARG00000028306) sarnp (ENSDARG00000059357) cdk2 (ENSDARG00000026577) MMP19 (ENSDARG00000091557) pmela (ENSDARG00000091298) timeless (ENSDARG00000078497) cpne5b (ENSDARG00000070919) KIF21B (ENSDARG00000009733) LHFPL5 (ENSDARG00000045023) srpk1b (ENSDARG00000031560) mapk14b (ENSDARG00000028721) tmem167b (ENSDARG00000059400) ENSDARG00000059399 b3galt6 (ENSDARG00000038414) ENSDARG00000077095 ##24 Clupeocephala DUPLICATION Clupeocephala ANCESTRAL SPECIES 39 ENSGT00950000183038.a.b.a.g ENSGT01020000230633 ENSGT00390000006330.a.b ENSGT00940000155637 ENSGT00940000156785 ENSGT00940000161997.b ENSGT01010000222336.b.a.a ENSGT00390000005536 ENSGT00390000003749 ENSGT00940000158593.a ENSGT00390000016940.c.a.b ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.a.b ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a ENSGT00940000154457.a.a.a.a ##22 ENSGT00950000183188.A.a.a ENSGT00940000159517 ENSGT00940000178340 ENSGT01050000245365 ENSGT00940000159587 ENSGT01040000240451.a.b.a ENSGT00940000155330.c ENSGT00940000161297 ENSGT00950000182905.a.a.b ENSGT00390000017840 ENSGT00940000158208.a.b ENSGT00940000154770 ENSGT00940000158956.d ENSGT00940000156890.a.a ENSGT00940000160528.a Euteleosteomorpha ANCESTRAL SPECIES 691 ENSGT00940000154457.a.b ##22 ENSGT00940000154457.a.a.a.a ##22 Protacanthopterygii ANCESTRAL SPECIES 524 ENSGT00950000183165.b.b.a.a ENSGT00940000154457.a.a.a.a ##22 Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 335 ENSGT00940000158675.b.a ENSGT00940000160528.a.c ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749 ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.d ENSGT00940000160203.a ENSGT00940000154457.a.b.i ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a ##22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00940000178340 Huchen MODERN SPECIES 3490 prph (ENSHHUG00000015328) ENSHHUG00000015354 ##22 ENSHHUG00000015884 ENSHHUG00000015887 ##22 pmela (ENSHHUG00000015891) cdk2 (ENSHHUG00000015903) ENSHHUG00000016551 Salmoninae_a ANCESTRAL SPECIES 14 ENSGT00950000182994.B.a.a.a.e ENSGT00940000162980.l ENSGT00950000182835.c.c.g.b.h ENSGT00940000166720.d ENSGT00940000155094.b.b ENSGT00940000160207.b.e ENSGT00950000183113.a.b.f ENSGT00390000002707.s ENSGT00940000155407.j ENSGT00940000157965.d.c ENSGT00940000161086.e ENSGT00530000063693.b.i ENSGT00940000160178.e.b ENSGT00940000159411.b.`c.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00950000183188.A.a.b.d ENSGT00390000002944.d.a ENSGT00940000159544.j ENSGT00940000155808 ENSGT00530000063607.a.m.b ENSGT01050000244940.a.a.g.b.b ENSGT01040000240451.a.b.a.b.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a.f ENSGT00940000160351.e ENSGT00940000158956.c.g ENSGT00940000160722.f ENSGT00940000154307.D.i.a ENSGT00940000156890.a.b.h Salmo ANCESTRAL SPECIES 42 ENSGT00990000211052 ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749 ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.d ENSGT00940000160203.a ENSGT00940000154457.a.b.i ##22 ENSGT00940000154457.a.a.a.a.b ##22 ENSGT00950000183165.b.b.a.a.b ENSGT00940000154457.a.a.a.a.a.a ##22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00390000002944.c.a ENSGT00940000166043.c ENSGT00940000154971.v ENSGT00530000063607.a.n.a ENSGT00390000002215.j.a ENSGT01050000244940.a.a.g.a.b ENSGT00940000159587.k ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000154276.g.b ENSGT00940000155330.c.e ENSGT00940000161297 ENSGT01000000214440.B.c ENSGT00530000063255.A.l Atlantic salmon MODERN SPECIES 14 ENSSSAG00000066545 ENSSSAG00000083495 ENSSSAG00000113917 AGAP2 (ENSSSAG00000081214) TSPAN31 (ENSSSAG00000114003) CDK4 (ENSSSAG00000081232) MARCHF9 (ENSSSAG00000106845) mettl1 (ENSSSAG00000081237) ENSSSAG00000109811 ENSSSAG00000065105 ENSSSAG00000081252 ENSSSAG00000081255 ENSSSAG00000081259 ENSSSAG00000081262 prph (ENSSSAG00000081265) ENSSSAG00000120054 ##22 ENSSSAG00000081267 ##22 ENSSSAG00000081268 ENSSSAG00000081271 cdk2 (ENSSSAG00000081273) ENSSSAG00000081276 ENSSSAG00000081288 ENSSSAG00000081289 ENSSSAG00000121952 ENSSSAG00000081291 ENSSSAG00000122117 ENSSSAG00000084911 ENSSSAG00000081424 ENSSSAG00000093889 ENSSSAG00000081436 stx16 (ENSSSAG00000051743) Oncorhynchus ANCESTRAL SPECIES 5 ENSGT00940000158675.b.a ENSGT00940000160528.a.c ENSGT00990000211052 ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749.h ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.d ENSGT00940000160203.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a ##22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00390000002944.c.a ENSGT00940000166043.c ENSGT00940000154971.v ENSGT00530000063607.a.n.a ENSGT00390000002215.j.a ENSGT01050000244940.a.a.g.a.b ENSGT00940000159587.k ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000154276.g.b ENSGT00940000155330.c.e ENSGT00940000161297 ENSGT01000000214440.B.c ENSGT00530000063255.A.l Oncorhynchus_a ANCESTRAL SPECIES 4 ENSGT00940000160528.a.c ENSGT00990000211052 ENSGT00940000158956.d.b ENSGT00940000160351.f ENSGT00940000154770.vb ENSGT00940000158208.a.b.b ENSGT00390000017840.g ENSGT00950000182905.a.a.b.c ENSGT00390000005536.n ENSGT00390000003749.h ENSGT00940000158593.a.d ENSGT00390000016940.c.a.b.c.a ENSGT00390000016940.c.a.b.d ENSGT00940000160203.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.a.a.a ##22 ENSGT00950000183188.A.a.a.e ENSGT00940000159517.d ENSGT00940000178340 ENSGT00940000166043.c ENSGT00940000154971.v ENSGT00530000063607.a.n.a ENSGT00390000002215.j.a ENSGT01050000244940.a.a.g.a.b ENSGT00940000159587.k ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000154276.g.b ENSGT00940000155330.c.e ENSGT01000000214440.B.c ENSGT00530000063255.A.l ENSGT00940000155569.a.a.g Chinook salmon MODERN SPECIES 31 ENSOTSG00005029846 AGAP2 (ENSOTSG00005029850) TSPAN31 (ENSOTSG00005029899) cdk4 (ENSOTSG00005029900) ENSOTSG00005029901 mettl1 (ENSOTSG00005029902) cyp27b1 (ENSOTSG00005029907) mcrs1 (ENSOTSG00005030187) suox (ENSOTSG00005030192) viml (ENSOTSG00005030194) MMP19 (ENSOTSG00005030195) ENSOTSG00005030198 ENSOTSG00005030199 prph (ENSOTSG00005030201) ENSOTSG00005030203 ENSOTSG00005030204 ##22 pmela (ENSOTSG00005030206) cdk2 (ENSOTSG00005030209) ENSOTSG00005030214 RAB31 (ENSOTSG00005030216) ENSOTSG00005030217 ENSOTSG00005030218 ENSOTSG00005030223 ENSOTSG00005030224 ENSOTSG00005030235 ENSOTSG00005030236 nsrp1 (ENSOTSG00005030260) ENSOTSG00005030262 ENSOTSG00005030263 coro6 (ENSOTSG00005030265) dnajc3b (ENSOTSG00005030268) Salmoninae ANCESTRAL SPECIES 3 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b ##22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h ENSGT00390000001799 Salmoninae_a ANCESTRAL SPECIES 21 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.a ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b ##22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h Salmo ANCESTRAL SPECIES 6 ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.a ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00950000183165.b.b.a.a.a ENSGT00940000154457.a.a.a.a.a.b ##22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h River trout MODERN SPECIES 5 SPRYD3 (ENSSTUG00000029972) ENSSTUG00000030009 ENSSTUG00000030016 PIP4K2C (ENSSTUG00000030040) AGAP2 (ENSSTUG00000030435) cdk4 (ENSSTUG00000030494) MARCHF9 (ENSSTUG00000030513) mettl1 (ENSSTUG00000030520) cyp27b1 (ENSSTUG00000030531) mcrs1 (ENSSTUG00000030592) MMP19 (ENSSTUG00000030640) ENSSTUG00000030724 timeless (ENSSTUG00000030744) prph (ENSSTUG00000030868) ENSSTUG00000030882 ENSSTUG00000030910 ##22 ENSSTUG00000030926 cdk2 (ENSSTUG00000030963) sarnp (ENSSTUG00000030983) gdf11 (ENSSTUG00000031005) ENSSTUG00000031013 ENSSTUG00000031037 ENSSTUG00000031040 TMBIM6 (ENSSTUG00000031044) avil (ENSSTUG00000031107) CTDSP2 (ENSSTUG00000035433) ENSSTUG00000035504 slc11a2 (ENSSTUG00000035551) STX16 (ENSSTUG00000038143) npepl1 (ENSSTUG00000038253) ctsz (ENSSTUG00000038327) Atlantic salmon MODERN SPECIES 3 ENSSSAG00000095933 ENSSSAG00000066258 ENSSSAG00000066219 AGAP2 (ENSSSAG00000066082) ENSSSAG00000114855 CDK4 (ENSSSAG00000066064) MARCHF9 (ENSSSAG00000120192) ENSSSAG00000066042 ENSSSAG00000081242 ENSSSAG00000065034 ENSSSAG00000064977 timeless (ENSSSAG00000063060) ENSSSAG00000064959 ENSSSAG00000095268 ##22 ENSSSAG00000099199 ENSSSAG00000104771 ##22 ENSSSAG00000062931 ENSSSAG00000110386 ENSSSAG00000062906 ENSSSAG00000062891 ENSSSAG00000119317 ENSSSAG00000085110 ENSSSAG00000062862 ENSSSAG00000093567 ENSSSAG00000095673 ENSSSAG00000093593 ENSSSAG00000055460 ENSSSAG00000055407 ENSSSAG00000114701 npepl1 (ENSSSAG00000055345) ctsz (ENSSSAG00000106221) Oncorhynchus ANCESTRAL SPECIES 1 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.b ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b ##22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h Rainbow trout MODERN SPECIES 8 ENSOMYG00000034548 ENSOMYG00000034484 IGFBP-6A2 (ENSOMYG00000034410) ENSOMYG00000062479 ENSOMYG00000034294 AGAP2 (ENSOMYG00000034215) CDK4 (ENSOMYG00000034166) MARCHF9 (ENSOMYG00000034152) ENSOMYG00000034078 ENSOMYG00000034027 ENSOMYG00000033987 ENSOMYG00000064376 ENSOMYG00000022941 ENSOMYG00000022779 ENSOMYG00000022743 ##22 ENSOMYG00000022658 ##22 ENSOMYG00000022608 ENSOMYG00000022586 ENSOMYG00000022493 ENSOMYG00000022454 ENSOMYG00000022383 ENSOMYG00000022335 ENSOMYG00000022320 ENSOMYG00000050293 ENSOMYG00000021276 ENSOMYG00000021004 hig1a (ENSOMYG00000020981) nramp-alpha (ENSOMYG00000017702) ENSOMYG00000071026 ENSOMYG00000017242 npepl1 (ENSOMYG00000017146) Oncorhynchus_a ANCESTRAL SPECIES 3 ENSGT00940000158675.b.b ENSGT00940000160528.a.d ENSGT00940000156890.a.a ENSGT00940000154307.D.j ENSGT00940000158956.d.a ENSGT00940000154770.wb ENSGT00940000158208.a.b.a ENSGT00390000017840.h ENSGT00950000182905.a.a.b.d ENSGT00390000005536.m ENSGT00940000158593.a.c ENSGT00390000016940.c.a.b.c.b ENSGT00390000015124 ENSGT00940000160203.b ENSGT00940000154457.a.b.j ##22 ENSGT00940000154457.a.a.a.a.a.b ##22 ENSGT00950000183188.A.a.a.f ENSGT00940000159517.c ENSGT00390000002944.c.b ENSGT00940000166043.d ENSGT00530000063607.a.n.b ENSGT00390000002215.j.b ENSGT01050000244940.a.a.g.a.a ENSGT00940000159587.l ENSGT01040000240451.a.b.a.b.a.a ENSGT00940000154276.g.a ENSGT00940000155330.c.f ENSGT01000000221659 ENSGT01000000214440.B.d ENSGT00530000063255.A.k ENSGT00940000155569.a.a.h Coho salmon MODERN SPECIES ENSOKIG00005003443 PIP4K2C (ENSOKIG00005003471) GPR182 (ENSOKIG00005003575) AGAP2 (ENSOKIG00005003591) ENSOKIG00005003607 cdk4 (ENSOKIG00005003611) MARCHF9 (ENSOKIG00005003617) ENSOKIG00005003622 CYP27B1 (ENSOKIG00005003640) mcrs1 (ENSOKIG00005003686) MMP19 (ENSOKIG00005003697) ENSOKIG00005003704 timeless (ENSOKIG00005003732) prph (ENSOKIG00005003787) ENSOKIG00005003801 ##22 ENSOKIG00005003813 ##22 ENSOKIG00005003819 ENSOKIG00005003829 CDK2 (ENSOKIG00005003833) ENSOKIG00005003857 ENSOKIG00005003886 ENSOKIG00005003895 ENSOKIG00005003904 TMBIM6 (ENSOKIG00005003910) AVIL (ENSOKIG00005003921) CTDSP2 (ENSOKIG00005003944) HIGD1A (ENSOKIG00005003974) ENSOKIG00005004009 STX16 (ENSOKIG00005004161) npepl1 (ENSOKIG00005004189) ctsz (ENSOKIG00005004239) Huchen MODERN SPECIES 1241 prph (ENSHHUG00000019277) ENSHHUG00000019011 ##22 ENSHHUG00000019003 ##22 ENSHHUG00000018859 cdk2 (ENSHHUG00000018828) gdf11 (ENSHHUG00000018806) ENSHHUG00000018804 ENSHHUG00000018792 ENSHHUG00000018783 ENSHHUG00000018738 TMBIM6 (ENSHHUG00000018627) avil (ENSHHUG00000017576) CTDSP2 (ENSHHUG00000017515) HIGD1A (ENSHHUG00000017494) slc11a2 (ENSHHUG00000016771) STX16 (ENSHHUG00000016740) npepl1 (ENSHHUG00000016677) Salmoninae ANCESTRAL SPECIES 2162 ENSGT00950000183165.b.b.a.a ENSGT00940000154457.a.a.a.a.b ##22 Salmoninae_a ANCESTRAL SPECIES 15 ENSGT01000000214440.B.c ENSGT00940000161297 ENSGT00940000155330.c.e ENSGT00940000154276.g.b ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000159587.k ENSGT01050000244940.a.a.g.a.b ENSGT00390000002215.j.a ENSGT00530000063607.a.n.a ENSGT00940000154971.v ENSGT00940000166043.c ENSGT00390000002944.c.a ENSGT00940000159517.d ENSGT00950000183188.A.a.a.e ENSGT00950000183165.b.b.a.a ENSGT00940000154457.a.a.a.a.b ##22 ENSGT00940000154457.a.b.i ##22 ENSGT00940000160203.a ENSGT00390000016940.c.a.b.d ENSGT00940000158593.a.d ENSGT00390000003749 ENSGT00390000005536.n ENSGT00950000182905.a.a.b.c ENSGT00390000017840.g ENSGT00940000158208.a.b.b ENSGT00940000154770.vb ENSGT00940000160351.f ENSGT00940000158956.d.b ENSGT00990000211052 ENSGT00940000160528.a.c ENSGT00940000158675.b.a Salmo ANCESTRAL SPECIES 42 ENSGT00940000161297 ENSGT00940000155330.c.e ENSGT00940000154276.g.b ENSGT01040000240451.a.b.a.b.a.b ENSGT00940000159587.k ENSGT01050000244940.a.a.g.a.b ENSGT00390000002215.j.a ENSGT00530000063607.a.n.a ENSGT00940000154971.v ENSGT00940000166043.c ENSGT00390000002944.c.a ENSGT00940000159517.d ENSGT00950000183188.A.a.a.e ENSGT00940000154457.a.a.a.a.a.a ##22 ENSGT00950000183165.b.b.a.a.b ENSGT00940000154457.a.a.a.a.b ##22 ENSGT00940000154457.a.b.i ##22 ENSGT00940000160203.a ENSGT00390000016940.c.a.b.d ENSGT00940000158593.a.d ENSGT00390000003749 ENSGT00390000005536.n ENSGT00950000182905.a.a.b.c ENSGT00390000017840.g ENSGT00940000158208.a.b.b ENSGT00940000154770.vb ENSGT00940000160351.f ENSGT00940000158956.d.b ENSGT00990000211052 ENSGT00940000160528.a.c ENSGT00940000158675.b.a River trout MODERN SPECIES 7 STX16 (ENSSTUG00000015167) EEF1AKMT3 (ENSSTUG00000015200) slc11a2 (ENSSTUG00000015227) ENSSTUG00000015520 ENSSTUG00000015526 avil (ENSSTUG00000015750) TMBIM6 (ENSSTUG00000018856) ENSSTUG00000019264 ENSSTUG00000019273 ENSSTUG00000019341 gdf11 (ENSSTUG00000019356) sarnp (ENSSTUG00000019366) cdk2 (ENSSTUG00000019455) pmela (ENSSTUG00000019493) ENSSTUG00000019504 TUBA4B (ENSSTUG00000019519) ##22 ENSSTUG00000019623 ##22 ENSSTUG00000019639 prph (ENSSTUG00000019642) ENSSTUG00000019680 MMP19 (ENSSTUG00000019690) suox (ENSSTUG00000019706) ENSSTUG00000019716 ENSSTUG00000019728 mcrs1 (ENSSTUG00000019739) cyp27b1 (ENSSTUG00000019763) mettl1 (ENSSTUG00000020097) MARCHF9 (ENSSTUG00000020124) cdk4 (ENSSTUG00000020137) TSPAN31 (ENSSTUG00000002246) AGAP2 (ENSSTUG00000002929) Oncorhynchus ANCESTRAL SPECIES 882 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.b ENSGT00940000154457.a.a.a.a.b ##22 Rainbow trout MODERN SPECIES 28 slc11a2 (ENSOMYG00000047677) ENSOMYG00000047573 ENSOMYG00000047571 ENSOMYG00000047558 ENSOMYG00000047520 ENSOMYG00000051097 ENSOMYG00000060775 ENSOMYG00000047510 ENSOMYG00000047506 ENSOMYG00000047503 ENSOMYG00000047499 ENSOMYG00000047493 ENSOMYG00000048658 ENSOMYG00000047480 ENSOMYG00000070767 ENSOMYG00000056942 ##22 ENSOMYG00000073921 ENSOMYG00000047471 ##22 ENSOMYG00000047467 ENSOMYG00000073139 ENSOMYG00000075691 ENSOMYG00000047457 ENSOMYG00000047454 ENSOMYG00000047452 ENSOMYG00000047434 ENSOMYG00000047410 ENSOMYG00000049565 MARCHF9 (ENSOMYG00000047409) CDK4 (ENSOMYG00000047397) TSPAN31 (ENSOMYG00000047383) AGAP2 (ENSOMYG00000047366) Acanthomorphata ANCESTRAL SPECIES 489 ENSGT00950000183165.b.b.a.a ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Cod MODERN SPECIES ENSGMOG00000003301 srpk1b (ENSGMOG00000035260) ENSGMOG00000027858 ENSGMOG00000032596 ENSGMOG00000022810 ENSGMOG00000029848 ada (ENSGMOG00000011406) ENSGMOG00000020076 ttpal (ENSGMOG00000011416) hnf4a (ENSGMOG00000011421) fitm2 (ENSGMOG00000011427) GDAP1L1 (ENSGMOG00000011433) ENSGMOG00000011467 jph2 (ENSGMOG00000011440) ENSGMOG00000035100 ENSGMOG00000022382 ##22 ENSGMOG00000011456 ENSGMOG00000011475 kansl2 (ENSGMOG00000011485) ENSGMOG00000029952 ENSGMOG00000030202 ENSGMOG00000034634 ENSGMOG00000011496 ctdsp2 (ENSGMOG00000011507) ENSGMOG00000011514 ENSGMOG00000036947 ENSGMOG00000030863 MARCHF9 (ENSGMOG00000011529) tspan31 (ENSGMOG00000022298) agap2 (ENSGMOG00000011545) ENSGMOG00000033443 Euacanthomorphacea ANCESTRAL SPECIES 515 ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Percomorphaceae ANCESTRAL SPECIES 451 ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Percomorphaceae_B ANCESTRAL SPECIES 309 ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 NAME_4 ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Sheepshead minnow MODERN SPECIES 899 adamts3 (ENSCVAG00000002061) NPFFR2 (ENSCVAG00000002068) ENSCVAG00000002074 ENSCVAG00000002078 olfml2ba (ENSCVAG00000002082) atf6 (ENSCVAG00000002095) ENSCVAG00000002107 lmx1a (ENSCVAG00000002116) ENSCVAG00000002120 ##22 ENSCVAG00000002128 sele (ENSCVAG00000002142) si:dkey-51e6.1 (ENSCVAG00000002147) si:dkey-97o5.1 (ENSCVAG00000002156) scyl3 (ENSCVAG00000000849) ENSCVAG00000002169 trabd2b (ENSCVAG00000002179) Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Turquoise killifish MODERN SPECIES 1616 IGDCC4 (ENSNFUG00015004491) SCAMP5 (ENSNFUG00015004482) LOXL1 (ENSNFUG00015004478) ENSNFUG00015004474 C18H15ORF59 (ENSNFUG00015004469) cd276 (ENSNFUG00015004464) UBL7 (ENSNFUG00015004456) tent4b (ENSNFUG00015004422) HEATR3 (ENSNFUG00015004394) SDR42E1 (ENSNFUG00015004380) WTIP (ENSNFUG00015004367) GPI (ENSNFUG00015004311) KIAA0355 (ENSNFUG00015004264) ss18l2 (ENSNFUG00015004246) lsm14ab (ENSNFUG00015023333) ENSNFUG00015023298 ##22 ENSNFUG00015023286 kctd15a (ENSNFUG00015023278) ENSNFUG00015023277 PEPD (ENSNFUG00015023263) ADAMTSL7 (ENSNFUG00015023225) ENSNFUG00015023203 larp6a (ENSNFUG00015023196) TM2D3 (ENSNFUG00015023191) TARSL2 (ENSNFUG00015023046) ulk3 (ENSNFUG00015023023) ENSNFUG00015023019 CPLX3 (ENSNFUG00015023016) CSK (ENSNFUG00015022989) ENSNFUG00015022980 EDC3 (ENSNFUG00015022976) Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Pomacentridae ANCESTRAL SPECIES 100 ENSGT00810000125541 ENSGT00940000155289.C ENSGT00940000162649.e.b ENSGT00940000162649.f.b ENSGT00730000111029.b ENSGT00940000155698.C ENSGT00390000014700.b.a.b.b.a ENSGT00390000014595.a.b ENSGT00940000165851 ENSGT00940000154318.B ENSGT00390000015505 ENSGT01010000222360.D.a ##25 ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00950000183205.b.a.b.a.a ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000160271 ENSGT00940000176920 ENSGT00940000158693.A ENSGT00950000183183.a ENSGT00940000156833.b ENSGT00940000155575.i.b ENSGT00940000157054.c.a ENSGT00940000156505.t Bicolor damselfish MODERN SPECIES 894 ENSSPAG00000007924 rnps1 (ENSSPAG00000009383) ENSSPAG00000009404 ENSSPAG00000009425 ENSSPAG00000009452 tspan4b (ENSSPAG00000009466) ENSSPAG00000009497 nosip (ENSSPAG00000009511) rcn3 (ENSSPAG00000009539) ##25 lin7b (ENSSPAG00000009551) snrnp70 (ENSSPAG00000009563) ENSSPAG00000009578 ENSSPAG00000009602 ##22 ABCC1 (ENSSPAG00000009624) ENSSPAG00000009679 trpm4a (ENSSPAG00000009692) zgc:86896 (ENSSPAG00000009751) wipi1 (ENSSPAG00000009786) SLC16A6 (ENSSPAG00000009813) ENSSPAG00000009842 ENSSPAG00000009859 dhps (ENSSPAG00000009870) NHERF2 (ENSSPAG00000009924) sstr5 (ENSSPAG00000009935) ENSSPAG00000009943 ENSSPAG00000009958 Pomacentridae_A ANCESTRAL SPECIES 105 ENSGT00810000125541 ENSGT00940000155289.C ENSGT00940000162649.e.b ENSGT00940000162649.f.b.c ENSGT00730000111029.b ENSGT00940000155698.C ENSGT00390000014700.b.a.b.b.a ENSGT00390000014595.a.b ENSGT00940000165851 ENSGT00940000154318.B ENSGT00390000015505 ENSGT01010000222360.D.a ##25 ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00950000183205.b.a.b.a.a ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000160271 ENSGT00940000176920 ENSGT00940000158693.A ENSGT00950000183183.a ENSGT00940000156833.b ENSGT00940000155575.i.b ENSGT00940000157054.c.a ENSGT00940000156505.t Amphiprion ANCESTRAL SPECIES 31 ENSGT00810000125541 ENSGT00940000155289.C ENSGT00940000162649.e.b ENSGT00940000162649.f.b.c ENSGT00730000111029.b ENSGT00940000155698.C ENSGT00390000014700.b.a.b.b.a ENSGT00390000014595.a.b ENSGT00940000165851 ENSGT00940000154318.B ENSGT00390000015505 ENSGT01010000222360.D.a ##25 ENSGT00940000153222.a.b.a ENSGT00940000160292 ENSGT00950000183205.b.a.b.a.a ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000160271 ENSGT00940000176920 ENSGT00940000158693.A ENSGT00950000183183.a ENSGT00940000156833.b ENSGT00940000155575.i.b ENSGT00940000157054.c.a ENSGT00940000156505.t Clown anemonefish MODERN SPECIES 2894 rcn3 (ENSAOCG00000000728) ##25 lin7b (ENSAOCG00000011692) snrnp70 (ENSAOCG00000011672) ENSAOCG00000011616 ENSAOCG00000002287 ##22 ABCC1 (ENSAOCG00000011529) ENSAOCG00000011393 Percomorphaceae_C ANCESTRAL SPECIES 247 ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Eupercaria ANCESTRAL SPECIES 209 ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Eupecaria_A ANCESTRAL SPECIES 210 ENSGT00940000154457.a.a.a.a ##22 ENSGT00940000154457.a.b ##22 Eupecaria_B DUPLICATION Eupecaria_B ANCESTRAL SPECIES 190 ENSGT00940000154457.a.a.a.a.c ##22 ENSGT00940000154457.a.b ##22 Perciformes ANCESTRAL SPECIES 196 ENSGT00940000154457.a.a.a.a.c ##22 ENSGT00940000154457.a.b ##22 Perciformes_a ANCESTRAL SPECIES 291 ENSGT00940000154457.a.a.a.a.c ##22 ENSGT00940000154457.a.b ##22 Pike perch DUPLICATION Pike perch DUPLICATION Pike perch MODERN SPECIES 103 ENSSLUG00000002866 ENSSLUG00000002861 ccn5 (ENSSLUG00000002859) ada (ENSSLUG00000002481) pkig (ENSSLUG00000002403) ttpal (ENSSLUG00000002394) hnf4a (ENSSLUG00000002372) R3HDML (ENSSLUG00000002362) fitm2 (ENSSLUG00000002359) GDAP1L1 (ENSSLUG00000002357) jph2 (ENSSLUG00000002353) ENSSLUG00000002351 ##22 TUBA4B (ENSSLUG00000002342) ##22 ENSSLUG00000002336 ##22 ENSSLUG00000002329 ##22 ENSSLUG00000002305 ##22 tuba1c (ENSSLUG00000002293) pmelb (ENSSLUG00000002252) sarnp (ENSSLUG00000002239) ccnt1 (ENSSLUG00000002225) kansl2 (ENSSLUG00000002197) ENSSLUG00000002179 TMBIM6 (ENSSLUG00000002156) ctdsp2 (ENSSLUG00000002138) SLC11A2 (ENSSLUG00000001755) MARCHF9 (ENSSLUG00000024754) tspan31 (ENSSLUG00000024752) agap2 (ENSSLUG00000024722) Pike perch MODERN SPECIES 103 ENSSLUG00000024675 gpr182 (ENSSLUG00000024703) ZBTB39 (ENSSLUG00000024706) agap2 (ENSSLUG00000024722) tspan31 (ENSSLUG00000024752) MARCHF9 (ENSSLUG00000024754) SLC11A2 (ENSSLUG00000001755) ctdsp2 (ENSSLUG00000002138) TMBIM6 (ENSSLUG00000002156) ENSSLUG00000002179 kansl2 (ENSSLUG00000002197) ccnt1 (ENSSLUG00000002225) sarnp (ENSSLUG00000002239) pmelb (ENSSLUG00000002252) tuba1c (ENSSLUG00000002293) ENSSLUG00000002305 ##22 ENSSLUG00000002329 ##22 ENSSLUG00000002336 ##22 TUBA4B (ENSSLUG00000002342) ##22 ENSSLUG00000002351 ##22 jph2 (ENSSLUG00000002353) GDAP1L1 (ENSSLUG00000002357) fitm2 (ENSSLUG00000002359) R3HDML (ENSSLUG00000002362) hnf4a (ENSSLUG00000002372) ttpal (ENSSLUG00000002394) pkig (ENSSLUG00000002403) ada (ENSSLUG00000002481) ccn5 (ENSSLUG00000002859) ENSSLUG00000002861 ENSSLUG00000002866 Pike perch DUPLICATION Pike perch MODERN SPECIES 103 tcea2 (ENSSLUG00000024533) SOX18 (ENSSLUG00000024540) xkr7b (ENSSLUG00000024542) CCM2L (ENSSLUG00000024547) CABLES2 (ENSSLUG00000024551) ENSSLUG00000024556 ENSSLUG00000024561 ENSSLUG00000024562 ENSSLUG00000024566 hsd17b10 (ENSSLUG00000024569) FAM120C (ENSSLUG00000024576) IDH3G (ENSSLUG00000024594) AVPR2 (ENSSLUG00000024631) slc16a1b (ENSSLUG00000024633) lima1a (ENSSLUG00000024640) ENSSLUG00000024644 ##22 spryd3 (ENSSLUG00000024652) igfbp6b (ENSSLUG00000024663) ENSSLUG00000024675 gpr182 (ENSSLUG00000024703) ZBTB39 (ENSSLUG00000024706) agap2 (ENSSLUG00000024722) tspan31 (ENSSLUG00000024752) MARCHF9 (ENSSLUG00000024754) SLC11A2 (ENSSLUG00000001755) ctdsp2 (ENSSLUG00000002138) TMBIM6 (ENSSLUG00000002156) ENSSLUG00000002179 kansl2 (ENSSLUG00000002197) ccnt1 (ENSSLUG00000002225) sarnp (ENSSLUG00000002239) Pike perch MODERN SPECIES 103 ENSSLUG00000002866 ENSSLUG00000002861 ccn5 (ENSSLUG00000002859) ada (ENSSLUG00000002481) pkig (ENSSLUG00000002403) ttpal (ENSSLUG00000002394) hnf4a (ENSSLUG00000002372) R3HDML (ENSSLUG00000002362) fitm2 (ENSSLUG00000002359) GDAP1L1 (ENSSLUG00000002357) jph2 (ENSSLUG00000002353) ENSSLUG00000002351 ##22 TUBA4B (ENSSLUG00000002342) ##22 ENSSLUG00000002336 ##22 ENSSLUG00000002329 ##22 ENSSLUG00000002305 ##22 tuba1c (ENSSLUG00000002293) pmelb (ENSSLUG00000002252) sarnp (ENSSLUG00000002239) ccnt1 (ENSSLUG00000002225) kansl2 (ENSSLUG00000002197) ENSSLUG00000002179 TMBIM6 (ENSSLUG00000002156) ctdsp2 (ENSSLUG00000002138) SLC11A2 (ENSSLUG00000001755) MARCHF9 (ENSSLUG00000024754) tspan31 (ENSSLUG00000024752) agap2 (ENSSLUG00000024722) ZBTB39 (ENSSLUG00000024706) Eupecaria_B DUPLICATION Eupecaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a ##22 Perciformes DUPLICATION Perciformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.a ##22 Cottioidei DUPLICATION Cottioidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.a.a ##22 Lumpfish MODERN SPECIES 22 gpr182 (ENSCLMG00005019756) ENSCLMG00005019755 agap2 (ENSCLMG00005019577) tspan31 (ENSCLMG00005019572) MARCHF9 (ENSCLMG00005019571) SLC11A2 (ENSCLMG00005017747) ctdsp2 (ENSCLMG00005017716) TMBIM6 (ENSCLMG00005017714) ENSCLMG00005017713 kansl2 (ENSCLMG00005017711) ccnt1 (ENSCLMG00005017710) sarnp (ENSCLMG00005017708) pmelb (ENSCLMG00005017707) tuba1c (ENSCLMG00005017706) ENSCLMG00005017705 ##22 TUBA4B (ENSCLMG00005017632) ##22 ENSCLMG00005017631 ENSCLMG00005017628 jph2 (ENSCLMG00005017627) GDAP1L1 (ENSCLMG00005017626) fitm2 (ENSCLMG00005017624) hnf4a (ENSCLMG00005017552) ttpal (ENSCLMG00005017546) pkig (ENSCLMG00005017544) ada (ENSCLMG00005017044) ccn5 (ENSCLMG00005017030) ENSCLMG00005017024 ugt5e1 (ENSCLMG00005017018) pfkfb1 (ENSCLMG00005017017) ENSCLMG00005016975 gdi1 (ENSCLMG00005016942) Stickleback MODERN SPECIES 11 FAM120C (ENSGACG00000010554) hsd17b10 (ENSGACG00000010525) ENSGACG00000010523 ENSGACG00000010520 CCM2L (ENSGACG00000010511) xkr7b (ENSGACG00000010506) SOX18 (ENSGACG00000010505) tcea2 (ENSGACG00000010495) rgs19 (ENSGACG00000010490) FAM187A (ENSGACG00000010484) oprl1 (ENSGACG00000010479) NPBWR1 (ENSGACG00000010477) RAB29 (ENSGACG00000010473) cry3a (ENSGACG00000010460) ENSGACG00000010457 ENSGACG00000010436 ##22 lama5 (ENSGACG00000010405) adrm1 (ENSGACG00000010370) DNAJC5 (ENSGACG00000010366) ENSGACG00000010359 tpd52l2b (ENSGACG00000010324) ppdpfb (ENSGACG00000010310) ENSGACG00000010308 ptk6b (ENSGACG00000010303) ENSGACG00000010298 nol4lb (ENSGACG00000010294) commd7 (ENSGACG00000010283) dnmt3bb.1 (ENSGACG00000010273) dnmt3bb.2 (ENSGACG00000010262) mapre1b (ENSGACG00000010256) acss2 (ENSGACG00000010216) Cottioidei ANCESTRAL SPECIES 2 ENSGT00390000017567 ENSGT00940000156650.i ENSGT00950000182994.B.a.a.a ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00940000154457.a.a.a.a.d.a.a.b ##22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT01100000263484.B.b.a Stickleback DUPLICATION Stickleback DUPLICATION Stickleback DUPLICATION Stickleback MODERN SPECIES 11 ENSGACG00000011772 ENSGACG00000011767 ZBTB39 (ENSGACG00000011765) agap2 (ENSGACG00000011751) tspan31 (ENSGACG00000011730) MARCHF9 (ENSGACG00000011728) SLC11A2 (ENSGACG00000011691) ctdsp2 (ENSGACG00000011678) TMBIM6 (ENSGACG00000011650) ENSGACG00000011642 kansl2 (ENSGACG00000011630) ccnt1 (ENSGACG00000011626) sarnp (ENSGACG00000011615) pmelb (ENSGACG00000011605) TUBA4B (ENSGACG00000011595) ##22 tuba2 (ENSGACG00000011587) ##22 tuba1c (ENSGACG00000011552) TUBA4B (ENSGACG00000011524) ##22 jph2 (ENSGACG00000011519) GDAP1L1 (ENSGACG00000011509) fitm2 (ENSGACG00000011502) hnf4a (ENSGACG00000011485) ttpal (ENSGACG00000011479) pkig (ENSGACG00000011477) ada (ENSGACG00000011456) ccn5 (ENSGACG00000011453) ENSGACG00000011450 ugt5e1 (ENSGACG00000011442) pfkfb1 (ENSGACG00000011410) ENSGACG00000011406 gdi1 (ENSGACG00000011384) Stickleback MODERN SPECIES 11 hnf4a (ENSGACG00000011485) ttpal (ENSGACG00000011479) pkig (ENSGACG00000011477) ada (ENSGACG00000011456) ccn5 (ENSGACG00000011453) ENSGACG00000011450 ugt5e1 (ENSGACG00000011442) pfkfb1 (ENSGACG00000011410) ENSGACG00000011406 gdi1 (ENSGACG00000011384) atp6ap1b (ENSGACG00000011378) taf8 (ENSGACG00000011366) camk1gb (ENSGACG00000011358) mical1 (ENSGACG00000011353) src (ENSGACG00000011349) ENSGACG00000011345 ##22 pink1 (ENSGACG00000011338) #20 ENSGACG00000011331 #19 ENSGACG00000011309 #18 fam43b (ENSGACG00000011306) #17 mul1b (ENSGACG00000011302) #15 VWA5B1 (ENSGACG00000011296) #14 ddx19a (ENSGACG00000011283) #9 cptp (ENSGACG00000011282) #11 ints11 (ENSGACG00000011260) #12 ENSGACG00000011257 #13 ENSGACG00000011252 ACAP3 (ENSGACG00000011244) #23 HIPK1 (ENSGACG00000011240) #24 sdf4 (ENSGACG00000011217) #25 c1qtnf12 (ENSGACG00000011209) #26 Stickleback MODERN SPECIES 11 ENSGACG00000011406 pfkfb1 (ENSGACG00000011410) ugt5e1 (ENSGACG00000011442) ENSGACG00000011450 ccn5 (ENSGACG00000011453) ada (ENSGACG00000011456) pkig (ENSGACG00000011477) ttpal (ENSGACG00000011479) hnf4a (ENSGACG00000011485) fitm2 (ENSGACG00000011502) GDAP1L1 (ENSGACG00000011509) jph2 (ENSGACG00000011519) TUBA4B (ENSGACG00000011524) ##22 tuba1c (ENSGACG00000011552) tuba2 (ENSGACG00000011587) ##22 TUBA4B (ENSGACG00000011595) ##22 pmelb (ENSGACG00000011605) sarnp (ENSGACG00000011615) ccnt1 (ENSGACG00000011626) kansl2 (ENSGACG00000011630) ENSGACG00000011642 TMBIM6 (ENSGACG00000011650) ctdsp2 (ENSGACG00000011678) SLC11A2 (ENSGACG00000011691) MARCHF9 (ENSGACG00000011728) tspan31 (ENSGACG00000011730) agap2 (ENSGACG00000011751) ZBTB39 (ENSGACG00000011765) ENSGACG00000011767 ENSGACG00000011772 ENSGACG00000011777 Stickleback MODERN SPECIES 11 ZBTB39 (ENSGACG00000011765) agap2 (ENSGACG00000011751) tspan31 (ENSGACG00000011730) MARCHF9 (ENSGACG00000011728) SLC11A2 (ENSGACG00000011691) ctdsp2 (ENSGACG00000011678) TMBIM6 (ENSGACG00000011650) ENSGACG00000011642 kansl2 (ENSGACG00000011630) ccnt1 (ENSGACG00000011626) sarnp (ENSGACG00000011615) pmelb (ENSGACG00000011605) TUBA4B (ENSGACG00000011595) ##22 tuba2 (ENSGACG00000011587) ##22 tuba1c (ENSGACG00000011552) TUBA4B (ENSGACG00000011524) ##22 jph2 (ENSGACG00000011519) GDAP1L1 (ENSGACG00000011509) fitm2 (ENSGACG00000011502) hnf4a (ENSGACG00000011485) ttpal (ENSGACG00000011479) pkig (ENSGACG00000011477) ada (ENSGACG00000011456) ccn5 (ENSGACG00000011453) ENSGACG00000011450 ugt5e1 (ENSGACG00000011442) pfkfb1 (ENSGACG00000011410) ENSGACG00000011406 gdi1 (ENSGACG00000011384) atp6ap1b (ENSGACG00000011378) taf8 (ENSGACG00000011366) Perciformes_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.a ##22 Channel bull blenny MODERN SPECIES 21 ugt5e1 (ENSCGOG00000005172) ENSCGOG00000005171 pfkfb1 (ENSCGOG00000004986) ENSCGOG00000004977 ccn5 (ENSCGOG00000004975) ada (ENSCGOG00000004781) pkig (ENSCGOG00000004774) ttpal (ENSCGOG00000004769) hnf4a (ENSCGOG00000004571) R3HDML (ENSCGOG00000004549) fitm2 (ENSCGOG00000004544) GDAP1L1 (ENSCGOG00000004529) jph2 (ENSCGOG00000004527) ENSCGOG00000004524 ENSCGOG00000004523 tuba2 (ENSCGOG00000003903) ##22 ENSCGOG00000016764 ENSCGOG00000016692 ##22 pmelb (ENSCGOG00000016690) sarnp (ENSCGOG00000016688) ccnt1 (ENSCGOG00000016683) kansl2 (ENSCGOG00000016654) ENSCGOG00000016646 TMBIM6 (ENSCGOG00000016617) ctdsp2 (ENSCGOG00000016612) ENSCGOG00000016611 SLC11A2 (ENSCGOG00000013880) MARCHF9 (ENSCGOG00000013837) tspan31 (ENSCGOG00000013833) agap2 (ENSCGOG00000013687) ENSCGOG00000013677 Perciformes DUPLICATION Perciformes ANCESTRAL SPECIES 4 ENSGT00950000182994.B.a.a.a ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.a.f ENSGT00940000154457.a.a.a.a.d.a.b.a ##22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Cottioidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.b.a ##22 Lumpfish MODERN SPECIES 22 TFCP2 (ENSCLMG00005019199) CSRNP2 (ENSCLMG00005019271) itga5 (ENSCLMG00005019276) RAPGEF3 (ENSCLMG00005019505) slc48a1a (ENSCLMG00005020580) SLC26A9 (ENSCLMG00005000138) PLXNA2 (ENSCLMG00005000356) rca2.1 (ENSCLMG00005002768) ENSCLMG00005002775 ptpn22 (ENSCLMG00005002778) RSBN1 (ENSCLMG00005002784) ENSCLMG00005002888 tmem269 (ENSCLMG00005002948) #7 HSPG2 (ENSCLMG00005003076) agmat (ENSCLMG00005003634) #21 ENSCLMG00005003638 ##22 pink1 (ENSCLMG00005003639) #20 ENSCLMG00005003640 #19 ENSCLMG00005003646 #18 fam43b (ENSCLMG00005003696) #17 ENSCLMG00005003697 #16 mul1b (ENSCLMG00005003699) #15 ENSCLMG00005003701 #14 ddx19a (ENSCLMG00005003703) #9 ENSCLMG00005003779 #10 ubxn10 (ENSCLMG00005003780) cptp (ENSCLMG00005003781) #11 ints11 (ENSCLMG00005003784) #12 ENSCLMG00005003789 #13 ENSCLMG00005003792 ACAP3 (ENSCLMG00005003803) #23 Perciformes_a ANCESTRAL SPECIES 2 ENSGT00950000182994.B.a.a.a ENSGT00940000162980 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.a.f ENSGT00940000154457.a.a.a.a.d.a.b.a ##22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Channel bull blenny MODERN SPECIES 21 pfkfb1 (ENSCGOG00000004986) ENSCGOG00000004977 ccn5 (ENSCGOG00000004975) ada (ENSCGOG00000004781) pkig (ENSCGOG00000004774) ttpal (ENSCGOG00000004769) hnf4a (ENSCGOG00000004571) R3HDML (ENSCGOG00000004549) fitm2 (ENSCGOG00000004544) GDAP1L1 (ENSCGOG00000004529) jph2 (ENSCGOG00000004527) ENSCGOG00000004524 ENSCGOG00000004523 tuba2 (ENSCGOG00000003903) ##22 ENSCGOG00000016764 ENSCGOG00000016692 ##22 pmelb (ENSCGOG00000016690) sarnp (ENSCGOG00000016688) ccnt1 (ENSCGOG00000016683) kansl2 (ENSCGOG00000016654) ENSCGOG00000016646 TMBIM6 (ENSCGOG00000016617) ctdsp2 (ENSCGOG00000016612) ENSCGOG00000016611 SLC11A2 (ENSCGOG00000013880) MARCHF9 (ENSCGOG00000013837) tspan31 (ENSCGOG00000013833) agap2 (ENSCGOG00000013687) ENSCGOG00000013677 gpr182 (ENSCGOG00000013673) ENSCGOG00000012697 Perciformes ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.b.b ##22 Cottioidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a.b.b ##22 Lumpfish MODERN SPECIES 22 ENSCLMG00005016975 pfkfb1 (ENSCLMG00005017017) ugt5e1 (ENSCLMG00005017018) ENSCLMG00005017024 ccn5 (ENSCLMG00005017030) ada (ENSCLMG00005017044) pkig (ENSCLMG00005017544) ttpal (ENSCLMG00005017546) hnf4a (ENSCLMG00005017552) fitm2 (ENSCLMG00005017624) GDAP1L1 (ENSCLMG00005017626) jph2 (ENSCLMG00005017627) ENSCLMG00005017628 ENSCLMG00005017631 TUBA4B (ENSCLMG00005017632) ##22 ENSCLMG00005017705 ##22 tuba1c (ENSCLMG00005017706) pmelb (ENSCLMG00005017707) sarnp (ENSCLMG00005017708) ccnt1 (ENSCLMG00005017710) kansl2 (ENSCLMG00005017711) ENSCLMG00005017713 TMBIM6 (ENSCLMG00005017714) ctdsp2 (ENSCLMG00005017716) SLC11A2 (ENSCLMG00005017747) MARCHF9 (ENSCLMG00005019571) tspan31 (ENSCLMG00005019572) agap2 (ENSCLMG00005019577) ENSCLMG00005019755 gpr182 (ENSCLMG00005019756) ENSCLMG00005019758 Eupecaria_C ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.a ##22 Gilthead seabream MODERN SPECIES 21 cd63 (ENSSAUG00010011797) letmd1 (ENSSAUG00010011791) zgc:56699 (ENSSAUG00010011789) nr4a1 (ENSSAUG00010011787) tamalin (ENSSAUG00010011779) dgkaa (ENSSAUG00010009293) rnf41 (ENSSAUG00010009251) ankrd52a (ENSSAUG00010008730) ENSSAUG00010008712 tuba1a (ENSSAUG00010008710) pmelb (ENSSAUG00010008705) sarnp (ENSSAUG00010008698) ENSSAUG00010008697 ENSSAUG00010008695 ##22 ENSSAUG00010008690 ##22 TUBA4B (ENSSAUG00010008679) ##22 jph2 (ENSSAUG00010008678) GDAP1L1 (ENSSAUG00010008676) fitm2 (ENSSAUG00010008674) R3HDML (ENSSAUG00010008670) hnf4a (ENSSAUG00010008665) ttpal (ENSSAUG00010008662) pkig (ENSSAUG00010008661) ada (ENSSAUG00010008446) ccn5 (ENSSAUG00010008438) ENSSAUG00010008437 ENSSAUG00010008435 ENSSAUG00010008434 ENSSAUG00010008432 ENSSAUG00010008430 ENSSAUG00010008429 Eupecaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.b ##22 Eupecaria_C ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a.d.b ##22 Gilthead seabream MODERN SPECIES 21 nemp1 (ENSSAUG00010011798) cd63 (ENSSAUG00010011797) letmd1 (ENSSAUG00010011791) zgc:56699 (ENSSAUG00010011789) nr4a1 (ENSSAUG00010011787) tamalin (ENSSAUG00010011779) dgkaa (ENSSAUG00010009293) rnf41 (ENSSAUG00010009251) ankrd52a (ENSSAUG00010008730) ENSSAUG00010008712 tuba1a (ENSSAUG00010008710) pmelb (ENSSAUG00010008705) sarnp (ENSSAUG00010008698) ENSSAUG00010008697 ENSSAUG00010008695 ##22 ENSSAUG00010008690 ##22 TUBA4B (ENSSAUG00010008679) ##22 jph2 (ENSSAUG00010008678) GDAP1L1 (ENSSAUG00010008676) fitm2 (ENSSAUG00010008674) R3HDML (ENSSAUG00010008670) hnf4a (ENSSAUG00010008665) ttpal (ENSSAUG00010008662) pkig (ENSSAUG00010008661) ada (ENSSAUG00010008446) ccn5 (ENSSAUG00010008438) ENSSAUG00010008437 ENSSAUG00010008435 ENSSAUG00010008434 ENSSAUG00010008432 ENSSAUG00010008430 Otomorpha ANCESTRAL SPECIES 114 ENSGT01040000240451.a.b.a ENSGT00940000159587 ENSGT01050000244940.a.a ENSGT00390000002215.j ENSGT00530000063607.a ENSGT00940000154971.v ENSGT00940000166043 ENSGT00390000002944 ENSGT00940000159517 ENSGT00950000183188.A.a.a ENSGT00940000158593.a ENSGT00390000016940.c.a.b ENSGT00390000015124 ENSGT00940000160203 ENSGT00940000154457.b ##22 ENSGT00940000154457.a.a.a.a ##22 ENSGT00390000003749 ENSGT00390000005536 ENSGT01010000222336.b.a.a ENSGT00940000161997.b ENSGT00940000156785 ENSGT00940000155637 ENSGT00390000006330.a.b ENSGT01020000230633 ENSGT00940000156832 ENSGT00950000183167.a.b.b.b ENSGT00940000164745.i.a ENSGT00390000010523.d ENSGT00950000183038.a.b.a.h ENSGT00530000063734.b ENSGT00940000157144.c.b Otophysi ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.a ##22 Cyprinoidei ANCESTRAL SPECIES 111 ENSGT00950000183188.A.a.a ENSGT00940000158593.a ENSGT00940000159517 ENSGT00390000002944 ENSGT00940000160203 ENSGT00940000154457.b ##22 ENSGT00940000154457.a.a.a.a ##22 ENSGT00390000003749 ENSGT00390000005536 ENSGT00940000156785 ENSGT00940000155637 ENSGT00390000006330.a.b ENSGT01020000230633 ENSGT00950000182908.B.c.a ENSGT00940000161079 ENSGT00940000157144.c.a ENSGT01030000234623.a.a.a.a.a.d.a ENSGT00390000012914 ENSGT00940000159430 ENSGT00390000004215.a.b.a ENSGT00740000115534.a.a.fb.b ENSGT00940000156890.a.a.t Cyprininae ANCESTRAL SPECIES 784 ENSGT00940000158593.a.f ENSGT00950000183188.A.a.a ENSGT00940000159517.e ENSGT00390000002944.b ENSGT00940000154457.a.a.a.a ##22 ENSGT00390000003749 ENSGT00390000005536.j ENSGT00940000156785.cb ENSGT00940000155637.hb.b Cyprininae_a ANCESTRAL SPECIES 667 ENSGT00940000158593.a.f ENSGT00950000183188.A.a.a ENSGT00940000159517.e ENSGT00390000002944.b ENSGT00940000154457.a.a.a.a ##22 ENSGT00390000003749 ENSGT00390000005536.j Golden-line barbel MODERN SPECIES 605 prph (ENSSGRG00000003879) ENSSGRG00000003865 ##22 ENSSGRG00000003232 ##22 suox (ENSSGRG00000003205) mcrs1 (ENSSGRG00000002421) ENSSGRG00000002417 ENSSGRG00000002416 nab2 (ENSSGRG00000002414) ENSSGRG00000002413 cnpy2 (ENSSGRG00000002412) ENSSGRG00000002411 DGKA (ENSSGRG00000001869) ENSSGRG00000001805 tp53rk (ENSSGRG00000001801) slc2a10 (ENSSGRG00000001798) ENSSGRG00000001636 ENSSGRG00000001629 PIP4K2C (ENSSGRG00000001560) Clupeiformes ANCESTRAL SPECIES 940 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a ENSGT00940000154457.a.a.a.a ##22 Atlantic herring MODERN SPECIES 21 ENSCHAG00000019914 uqcrc1 (ENSCHAG00000019228) TTLL3 (ENSCHAG00000019136) ENSCHAG00000019092 rae1 (ENSCHAG00000019013) ENSCHAG00000018998 gdf11 (ENSCHAG00000018985) sarnp (ENSCHAG00000018982) cdk2 (ENSCHAG00000018905) pmela (ENSCHAG00000018890) MMP19 (ENSCHAG00000018842) ENSCHAG00000018821 timeless (ENSCHAG00000018595) prph (ENSCHAG00000018574) tuba1b (ENSCHAG00000018544) TUBA4B (ENSCHAG00000018538) ##22 suox (ENSCHAG00000018535) mcrs1 (ENSCHAG00000018468) ENSCHAG00000018455 ENSCHAG00000018431 ENSCHAG00000018424 ENSCHAG00000018414 tbc1d20 (ENSCHAG00000018345) rbck1 (ENSCHAG00000018283) maf1a (ENSCHAG00000018196) trib3 (ENSCHAG00000018185) sox12 (ENSCHAG00000018177) pnp4a (ENSCHAG00000018159) ENSCHAG00000018145 rem1 (ENSCHAG00000018123) rbm39a (ENSCHAG00000017579) Clupeocephala ANCESTRAL SPECIES 1094 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b ##22 Euteleosteomorpha DUPLICATION Euteleosteomorpha DUPLICATION Euteleosteomorpha ANCESTRAL SPECIES 854 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a ##22 Protacanthopterygii DUPLICATION Protacanthopterygii ANCESTRAL SPECIES 628 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a ##22 Salmoninae ANCESTRAL SPECIES 2196 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a ##22 Salmoninae_a ANCESTRAL SPECIES 1059 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a ##22 Oncorhynchus ANCESTRAL SPECIES 881 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a ##22 Oncorhynchus_a ANCESTRAL SPECIES 968 ENSGT00950000182825.A.a.b.a.b.a.a.b ENSGT00940000154457.a.a.a.b.a.a.a ##22 Chinook salmon MODERN SPECIES 7 lima1a (ENSOTSG00005009916) igfbp6b (ENSOTSG00005009915) ENSOTSG00005009828 gpr182 (ENSOTSG00005009827) ENSOTSG00005009826 agap2 (ENSOTSG00005005733) ENSOTSG00005005721 ctdsp2 (ENSOTSG00005005719) TMBIM6 (ENSOTSG00005005718) ENSOTSG00005005717 ccnt1 (ENSOTSG00005005716) ccnt1 (ENSOTSG00005005714) ENSOTSG00005005705 pmelb (ENSOTSG00005005702) ENSOTSG00005005701 TUBA4B (ENSOTSG00005005700) ##22 ENSOTSG00005005699 ##22 jph2 (ENSOTSG00005005698) GDAP1L1 (ENSOTSG00005005696) fitm2 (ENSOTSG00005005694) R3HDML (ENSOTSG00005005692) hnf4a (ENSOTSG00005005667) ttpal (ENSOTSG00005028588) pkig (ENSOTSG00005028587) ENSOTSG00005028586 ada (ENSOTSG00005027934) ccn5 (ENSOTSG00005027933) pfkfb1 (ENSOTSG00005024375) ENSOTSG00005023923 gdi1 (ENSOTSG00005023907) atp6ap1b (ENSOTSG00005023905) Coho salmon MODERN SPECIES 8 znf740b (ENSOKIG00005031596) ENSOKIG00005031581 ENSOKIG00005031575 ENSOKIG00005043023 gpr182 (ENSOKIG00005042975) ENSOKIG00005042968 agap2 (ENSOKIG00005041804) MARCHF9 (ENSOKIG00005041712) ctdsp2 (ENSOKIG00005041686) TMBIM6 (ENSOKIG00005041653) ENSOKIG00005041627 CCNT1 (ENSOKIG00005041583) ENSOKIG00005041445 pmelb (ENSOKIG00005041373) ENSOKIG00005041338 TUBA4B (ENSOKIG00005041249) ##22 tuba1b (ENSOKIG00005041233) jph2 (ENSOKIG00005041215) fitm2 (ENSOKIG00005041202) ENSOKIG00005041168 hnf4a (ENSOKIG00005040952) ttpal (ENSOKIG00005040897) pkig (ENSOKIG00005040874) ada (ENSOKIG00005040663) ccn5 (ENSOKIG00005040624) pfkfb1 (ENSOKIG00005038187) ENSOKIG00005038005 gdi1 (ENSOKIG00005037902) atp6ap1b (ENSOKIG00005037834) TAF8 (ENSOKIG00005037731) ENSOKIG00005037695 Protacanthopterygii ANCESTRAL SPECIES 6 ENSGT00940000158956.c ENSGT00940000160351.e ENSGT00940000158208.a.a ENSGT00940000155330.b ENSGT01040000240451.a.b.a.b.b ENSGT01050000244940.a.a.g.b ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544.j ENSGT00940000159544.i ENSGT00390000002944.d ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b ##22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000159411.b ENSGT00940000160178 ENSGT00530000063693.b ENSGT00940000161086 ENSGT00940000157965.d ENSGT00940000155407 ENSGT00390000002707 ENSGT00950000183113.a.b ENSGT00940000160207.b ENSGT00940000155094.b ENSGT00940000166720.d ENSGT00950000182835.c.c.g.b ENSGT00940000162980 ENSGT00950000182994.B.a.a.a.f Salmoninae ANCESTRAL SPECIES 113 ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b ##22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00940000155094.b.a ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f ENSGT00940000156650.i.e ENSGT00390000017567.q Salmoninae_a ANCESTRAL SPECIES 27 ENSGT00940000159609.n.b ENSGT00940000158313.a.b.c ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b ##22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00940000155094.b.a ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f ENSGT00940000156650.i.e ENSGT00390000017567.q Oncorhynchus ANCESTRAL SPECIES 20 ENSGT00940000159609.n.b ENSGT00940000158313.a.b.c ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b ##22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f.b ENSGT00940000156650.i.e ENSGT00390000017567.q ENSGT00390000005294.a.b Oncorhynchus_a ANCESTRAL SPECIES 7 ENSGT00940000159609.n.b ENSGT00940000158313.a.b.c ENSGT00940000160528.b.d ENSGT00940000156890.a.b.g ENSGT00940000154307.D.i.b ENSGT00940000160722.e ENSGT00940000158956.c.h ENSGT00940000158208.a.a.e ENSGT01040000240451.a.b.a.b.b.b ENSGT01050000244940.a.a.g.b.a ENSGT00530000063607.a.m.a ENSGT00940000159544.i ENSGT00390000002944.d.b ENSGT00950000183188.A.a.b.c ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.a.a.b ENSGT00940000154457.a.a.a.b.a.a.b ##22 ENSGT00940000159411.b.`c.a ENSGT00940000160178.e.a ENSGT00530000063693.b.j ENSGT00940000161086.f ENSGT00940000157965.d.d ENSGT00940000155407.i ENSGT00390000002707.t ENSGT00950000183113.a.b.e ENSGT00940000160207.b.f ENSGT00950000182835.c.c.g.b.g ENSGT00940000162980.k ENSGT00950000182994.B.a.a.a.f.b ENSGT00940000156650.i.e ENSGT00390000017567.q ENSGT00390000005294.a.b Chinook salmon MODERN SPECIES 7 igfbp6b (ENSOTSG00005009915) ENSOTSG00005009828 gpr182 (ENSOTSG00005009827) ENSOTSG00005009826 agap2 (ENSOTSG00005005733) ENSOTSG00005005721 ctdsp2 (ENSOTSG00005005719) TMBIM6 (ENSOTSG00005005718) ENSOTSG00005005717 ccnt1 (ENSOTSG00005005716) ccnt1 (ENSOTSG00005005714) ENSOTSG00005005705 pmelb (ENSOTSG00005005702) ENSOTSG00005005701 TUBA4B (ENSOTSG00005005700) ##22 ENSOTSG00005005699 ##22 jph2 (ENSOTSG00005005698) GDAP1L1 (ENSOTSG00005005696) fitm2 (ENSOTSG00005005694) R3HDML (ENSOTSG00005005692) hnf4a (ENSOTSG00005005667) ttpal (ENSOTSG00005028588) pkig (ENSOTSG00005028587) ENSOTSG00005028586 ada (ENSOTSG00005027934) ccn5 (ENSOTSG00005027933) pfkfb1 (ENSOTSG00005024375) ENSOTSG00005023923 gdi1 (ENSOTSG00005023907) atp6ap1b (ENSOTSG00005023905) taf8 (ENSOTSG00005023900) Northern pike MODERN SPECIES 11 gpr182 (ENSELUG00000007136) ZBTB39 (ENSELUG00000007121) agap2 (ENSELUG00000007107) tspan31 (ENSELUG00000007060) ENSELUG00000007038 SLC11A2 (ENSELUG00000007018) TMBIM6 (ENSELUG00000006973) ENSELUG00000006909 kansl2 (ENSELUG00000000222) ccnt1 (ENSELUG00000006830) ccnt1 (ENSELUG00000006814) ENSELUG00000006786 pmelb (ENSELUG00000006726) ENSELUG00000006694 #22 ENSELUG00000006681 ENSELUG00000013081 ##22 jph2 (ENSELUG00000006661) GDAP1L1 (ENSELUG00000006637) fitm2 (ENSELUG00000006611) R3HDML (ENSELUG00000006594) hnf4a (ENSELUG00000006558) ttpal (ENSELUG00000006513) pkig (ENSELUG00000006496) ada (ENSELUG00000006483) ENSELUG00000032073 ccn5 (ENSELUG00000006428) ENSELUG00000028739 pfkfb1 (ENSELUG00000006386) ITIH6 (ENSELUG00000006309) gdi1 (ENSELUG00000006250) atp6ap1b (ENSELUG00000006198) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.a ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.a ##22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.a ##22 Tiger tail seahorse MODERN SPECIES 261 mfsd6a (ENSHCOG00000008521) ENSHCOG00000008499 ahr1b (ENSHCOG00000008459) ENSHCOG00000008248 sh3bp4a (ENSHCOG00000008245) arl4cb (ENSHCOG00000008233) AOX1 (ENSHCOG00000008197) bzw1a (ENSHCOG00000008122) ENSHCOG00000008098 ENSHCOG00000008091 ENSHCOG00000008045 KYNU (ENSHCOG00000008024) tmem269 (ENSHCOG00000007976) #7 HSPG2 (ENSHCOG00000007952) agmat (ENSHCOG00000007845) #21 ENSHCOG00000007840 ##22 fam43b (ENSHCOG00000007837) #17 ENSHCOG00000007832 #16 mul1b (ENSHCOG00000007824) #15 NUP210 (ENSHCOG00000007802) ENSHCOG00000007559 BICD2 (ENSHCOG00000007546) ENSHCOG00000007516 zgc:171857 (ENSHCOG00000007486) WNT7A (ENSHCOG00000007463) FBLN2 (ENSHCOG00000007449) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b ##22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b ##22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.a.b ##22 Coho salmon MODERN SPECIES 16 ZBTB39 (ENSOKIG00005012335) agap2 (ENSOKIG00005012353) tspan31 (ENSOKIG00005012433) MARCHF9 (ENSOKIG00005012450) SLC11A2 (ENSOKIG00005012522) ctdsp2 (ENSOKIG00005013608) TMBIM6 (ENSOKIG00005013643) ENSOKIG00005013673 kansl2 (ENSOKIG00005013700) ccnt1 (ENSOKIG00005013743) ccnt1 (ENSOKIG00005013752) ENSOKIG00005013769 ENSOKIG00005013804 ENSOKIG00005013819 #22 ENSOKIG00005013854 ENSOKIG00005013875 ##22 jph2 (ENSOKIG00005013893) ENSOKIG00005013899 fitm2 (ENSOKIG00005013908) R3HDML (ENSOKIG00005013912) hnf4a (ENSOKIG00005013923) ttpal (ENSOKIG00005014006) pkig (ENSOKIG00005014024) ada (ENSOKIG00005014057) ccn5 (ENSOKIG00005014325) ENSOKIG00005014328 ENSOKIG00005014338 pfkfb1 (ENSOKIG00005014506) ENSOKIG00005018763 gdi1 (ENSOKIG00005018822) atp6ap1b (ENSOKIG00005019630) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Protacanthopterygii ANCESTRAL SPECIES 557 ENSGT00950000183165.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Salmoninae ANCESTRAL SPECIES 1983 ENSGT00950000183165.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Coho salmon MODERN SPECIES 25 STX16 (ENSOKIG00005034527) slc11a2 (ENSOKIG00005034199) ENSOKIG00005034141 CTDSP2 (ENSOKIG00005034104) avil (ENSOKIG00005031571) TMBIM6 (ENSOKIG00005031205) ENSOKIG00005031176 ENSOKIG00005031161 ENSOKIG00005031152 gdf11 (ENSOKIG00005031138) ENSOKIG00005031131 SARNP (ENSOKIG00005031020) cdk2 (ENSOKIG00005030929) pmela (ENSOKIG00005030914) ENSOKIG00005030909 ENSOKIG00005030897 ##22 ENSOKIG00005030876 ##22 PRPH (ENSOKIG00005030805) ENSOKIG00005030774 MMP19 (ENSOKIG00005030747) suox (ENSOKIG00005030755) cyp27b1 (ENSOKIG00005030670) mettl1 (ENSOKIG00005030597) MARCHF9 (ENSOKIG00005030579) CDK4 (ENSOKIG00005030553) TSPAN31 (ENSOKIG00005030501) AGAP2 (ENSOKIG00005030140) ENSOKIG00005030020 ENSOKIG00005030006 ENSOKIG00005029979 SPRYD3 (ENSOKIG00005029871) Huchen MODERN SPECIES 243 ENSHHUG00000047271 gpr182 (ENSHHUG00000047269) ENSHHUG00000047267 agap2 (ENSHHUG00000047216) ENSHHUG00000047213 MARCHF9 (ENSHHUG00000047211) ctdsp2 (ENSHHUG00000047201) TMBIM6 (ENSHHUG00000047190) ENSHHUG00000047179 kansl2 (ENSHHUG00000047158) ccnt1 (ENSHHUG00000047155) sarnp (ENSHHUG00000047137) pmelb (ENSHHUG00000047120) ENSHHUG00000047008 #22 ENSHHUG00000047004 TUBA4B (ENSHHUG00000047002) ##22 ENSHHUG00000046990 jph2 (ENSHHUG00000046988) ENSHHUG00000046987 GDAP1L1 (ENSHHUG00000046977) fitm2 (ENSHHUG00000046972) R3HDML (ENSHHUG00000046968) hnf4a (ENSHHUG00000046902) ttpal (ENSHHUG00000046900) pkig (ENSHHUG00000046897) ada (ENSHHUG00000046856) ccn5 (ENSHHUG00000046846) ENSHHUG00000046841 pfkfb1 (ENSHHUG00000045619) ENSHHUG00000045459 gdi1 (ENSHHUG00000045410) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Percomorphaceae ANCESTRAL SPECIES 387 ENSGT00950000183165.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Percomorphaceae_C ANCESTRAL SPECIES 4 ENSGT00950000182835.c.c.g.b ENSGT00940000166720 ENSGT00940000155094.b ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 ENSGT00940000154457.a.a.b #22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b Percomorphaceae_D ANCESTRAL SPECIES 80 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 Carangaria ANCESTRAL SPECIES 73 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 Pleuronectoidei ANCESTRAL SPECIES 157 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 Tongue sole MODERN SPECIES 1 ENSCSEG00000009885 pfkfb1 (ENSCSEG00000009829) ENSCSEG00000009816 ENSCSEG00000009804 ugt5e1 (ENSCSEG00000009801) ccn5 (ENSCSEG00000009789) ada (ENSCSEG00000009764) pkig (ENSCSEG00000009758) ttpal (ENSCSEG00000009750) hnf4a (ENSCSEG00000009708) fitm2 (ENSCSEG00000009699) GDAP1L1 (ENSCSEG00000009689) ENSCSEG00000009677 tuba1b (ENSCSEG00000009667) ENSCSEG00000009661 TUBA4B (ENSCSEG00000009654) ##22 pmelb (ENSCSEG00000009638) ccnt1 (ENSCSEG00000009610) kansl2 (ENSCSEG00000009572) ENSCSEG00000009548 TMBIM6 (ENSCSEG00000009530) ctdsp2 (ENSCSEG00000009526) SLC11A2 (ENSCSEG00000009471) MARCHF9 (ENSCSEG00000009463) tspan31 (ENSCSEG00000009454) agap2 (ENSCSEG00000009387) gpr182 (ENSCSEG00000009374) ENSCSEG00000009369 ENSCSEG00000009357 igfbp6b (ENSCSEG00000009344) spryd3 (ENSCSEG00000009310) Eupercaria ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Eupecaria_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Eupecaria_B ANCESTRAL SPECIES 77 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Eupecaria_C ANCESTRAL SPECIES 5 ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00390000002944 ENSGT00950000183188.A.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.b #22 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.h.e.a ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Gilthead seabream MODERN SPECIES 21 ormdl2 (ENSSAUG00010011802) nemp1 (ENSSAUG00010011798) cd63 (ENSSAUG00010011797) letmd1 (ENSSAUG00010011791) zgc:56699 (ENSSAUG00010011789) nr4a1 (ENSSAUG00010011787) tamalin (ENSSAUG00010011779) dgkaa (ENSSAUG00010009293) rnf41 (ENSSAUG00010009251) ankrd52a (ENSSAUG00010008730) ENSSAUG00010008712 tuba1a (ENSSAUG00010008710) pmelb (ENSSAUG00010008705) sarnp (ENSSAUG00010008698) ENSSAUG00010008697 ENSSAUG00010008695 ##22 ENSSAUG00010008690 ##22 TUBA4B (ENSSAUG00010008679) ##22 jph2 (ENSSAUG00010008678) GDAP1L1 (ENSSAUG00010008676) fitm2 (ENSSAUG00010008674) R3HDML (ENSSAUG00010008670) hnf4a (ENSSAUG00010008665) ttpal (ENSSAUG00010008662) pkig (ENSSAUG00010008661) ada (ENSSAUG00010008446) ccn5 (ENSSAUG00010008438) ENSSAUG00010008437 ENSSAUG00010008435 ENSSAUG00010008434 ENSSAUG00010008432 Perciformes ANCESTRAL SPECIES 165 ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Perciformes_a ANCESTRAL SPECIES 299 ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00940000154457.a.a.a.b.b ##22 Pike perch MODERN SPECIES 103 gpr182 (ENSSLUG00000024703) ZBTB39 (ENSSLUG00000024706) agap2 (ENSSLUG00000024722) tspan31 (ENSSLUG00000024752) MARCHF9 (ENSSLUG00000024754) SLC11A2 (ENSSLUG00000001755) ctdsp2 (ENSSLUG00000002138) TMBIM6 (ENSSLUG00000002156) ENSSLUG00000002179 kansl2 (ENSSLUG00000002197) ccnt1 (ENSSLUG00000002225) sarnp (ENSSLUG00000002239) pmelb (ENSSLUG00000002252) tuba1c (ENSSLUG00000002293) ENSSLUG00000002305 ##22 ENSSLUG00000002329 ##22 ENSSLUG00000002336 ##22 TUBA4B (ENSSLUG00000002342) ##22 ENSSLUG00000002351 ##22 jph2 (ENSSLUG00000002353) GDAP1L1 (ENSSLUG00000002357) fitm2 (ENSSLUG00000002359) R3HDML (ENSSLUG00000002362) hnf4a (ENSSLUG00000002372) ttpal (ENSSLUG00000002394) pkig (ENSSLUG00000002403) ada (ENSSLUG00000002481) ccn5 (ENSSLUG00000002859) ENSSLUG00000002861 ENSSLUG00000002866 Cottioidei ANCESTRAL SPECIES 159 ENSGT00950000183165.b.b.b.b ENSGT00940000154457.a.a.a.b.b ##22 Lumpfish MODERN SPECIES 22 CABLES2 (ENSCLMG00005014649) ENSCLMG00005014648 CCM2L (ENSCLMG00005014645) xkr7b (ENSCLMG00005014644) SOX18 (ENSCLMG00005014635) tcea2 (ENSCLMG00005014564) rgs19 (ENSCLMG00005014561) FAM187A (ENSCLMG00005014560) oprl1 (ENSCLMG00005014558) NPBWR2 (ENSCLMG00005014557) ENSCLMG00005014556 RAB29 (ENSCLMG00005014555) cry3a (ENSCLMG00005014554) rps21 (ENSCLMG00005014552) ENSCLMG00005014551 ENSCLMG00005014549 ##22 lama5 (ENSCLMG00005014543) adrm1 (ENSCLMG00005014536) ADRM1 (ENSCLMG00005014534) ADRM1 (ENSCLMG00005014504) DNAJC5 (ENSCLMG00005014500) trim101 (ENSCLMG00005014498) tpd52l2b (ENSCLMG00005014496) ppdpfb (ENSCLMG00005014495) ptk6b (ENSCLMG00005014494) ENSCLMG00005014492 nol4lb (ENSCLMG00005014491) commd7 (ENSCLMG00005014490) dnmt3bb.1 (ENSCLMG00005012506) dnmt3bb.2 (ENSCLMG00005012232) mapre1b (ENSCLMG00005012230) Ovalentaria ANCESTRAL SPECIES 6 ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000183165.b.b.b.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.a.b ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.a.a ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Ovalentaria_B ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Cichlidae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Haplochromini ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Haplochromini_A ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 P. nyererei MODERN SPECIES 754 pak1 (ENSPNYG00000017957) ENSPNYG00000017940 ##22 ENSPNYG00000017913 myo7aa (ENSPNYG00000017768) flot2b (ENSPNYG00000017721) FAM222B (ENSPNYG00000017716) Atherinomorphae ANCESTRAL SPECIES 3 ENSGT00950000182835.c.c.g.b ENSGT00940000155094.b.x.b ENSGT00940000166720 ENSGT00940000155094.b.w ENSGT00940000160207.b ENSGT00950000183113.a.b ENSGT00390000002707 ENSGT00940000155407 ENSGT00940000157965.d ENSGT00940000161086 ENSGT00530000063693.b ENSGT00940000160178 ENSGT00940000159411.b ENSGT00950000182825.A.a.b.a.b.a.a.a.b.g.b ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 ENSGT00950000183188.A.a.b ENSGT00390000002944 ENSGT00940000159544 ENSGT00940000155808 ENSGT00530000063607.a ENSGT01050000244940.a.a ENSGT01040000240451.a.b.a ENSGT00940000155330.b ENSGT00940000158208.a.a ENSGT00940000160351 ENSGT00940000158956.c ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000156890.a.b ENSGT00940000160528.b Cyprinodontiformes ANCESTRAL SPECIES 130 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 Aplocheiloidei ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Turquoise killifish MODERN SPECIES 1624 lhfpl5b (ENSNFUG00015023161) CPNE5 (ENSNFUG00015023021) dclre1b (ENSNFUG00015023000) ENSNFUG00015022999 adora1b (ENSNFUG00015022998) mmp9 (ENSNFUG00015022858) ZNF335 (ENSNFUG00015022709) ENSNFUG00015022697 PROK1 (ENSNFUG00015022690) lamtor5 (ENSNFUG00015022689) SLC16A4 (ENSNFUG00015022684) RBM15 (ENSNFUG00015022683) ALX3 (ENSNFUG00015022679) ENSNFUG00015022676 slc6a17 (ENSNFUG00015022669) ENSNFUG00015022660 ##22 KCNC4 (ENSNFUG00015022655) ENSNFUG00015022652 ENSNFUG00015022650 ENSNFUG00015022648 ahcyl1 (ENSNFUG00015022460) nfyal (ENSNFUG00015022433) ngrn (ENSNFUG00015022428) SORT1B (ENSNFUG00015022402) SYPL2B (ENSNFUG00015022396) AMIGO1 (ENSNFUG00015022395) GPR61 (ENSNFUG00015022394) gnai3 (ENSNFUG00015022390) gnat2 (ENSNFUG00015022385) GSTM3 (ENSNFUG00015022304) GSTM3 (ENSNFUG00015022289) Cyprinodontoidei ANCESTRAL SPECIES 174 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.sd.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 NAME_4 ANCESTRAL SPECIES 544 ENSGT00950000182825.A.a.b.a.b.a.a.a.a.b.td.a.a ENSGT00950000182825.A.a.b.a.a ENSGT00940000154457.a.a.a.b.b ##22 Mummichog MODERN SPECIES 797 arfip2b (ENSFHEG00000011111) fhdc3 (ENSFHEG00000011175) trim3b (ENSFHEG00000011383) ENSFHEG00000011424 ENSFHEG00000011433 ##22 trim47 (ENSFHEG00000011466) ENSFHEG00000011486 Oryzias ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Oryzias_b ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Javanese ricefish MODERN SPECIES 21 ENSOJAG00000000748 acss2 (ENSOJAG00000000533) tafazzin (ENSOJAG00000000467) atp6ap1a (ENSOJAG00000000456) ENSOJAG00000000442 ENSOJAG00000000437 ada (ENSOJAG00000000407) ENSOJAG00000000385 ttpal (ENSOJAG00000000370) hnf4a (ENSOJAG00000000335) R3HDML (ENSOJAG00000000270) fitm2 (ENSOJAG00000000255) GDAP1L1 (ENSOJAG00000000247) jph2 (ENSOJAG00000000238) ENSOJAG00000000216 ENSOJAG00000000139 ##22 pmelb (ENSOJAG00000000094) sarnp (ENSOJAG00000000076) ccnt1 (ENSOJAG00000017071) kansl2 (ENSOJAG00000017036) ENSOJAG00000016993 TMBIM6 (ENSOJAG00000016960) ctdsp2 (ENSOJAG00000016915) SLC11A2 (ENSOJAG00000015270) MARCHF9 (ENSOJAG00000015235) tspan31 (ENSOJAG00000015209) agap2 (ENSOJAG00000014437) gpr182 (ENSOJAG00000014395) ZBTB39 (ENSOJAG00000014387) ENSOJAG00000013820 igfbp6b (ENSOJAG00000013754) Oryzias_a ANCESTRAL SPECIES ENSGT00940000154457.a.a.a.b.b ##22 Japanese Medaka HdrR MODERN SPECIES 22 ENSORLG00000022907 ELOF1 (ENSORLG00000016547) CNN1 (ENSORLG00000016543) tlcd4b (ENSORLG00000024397) plppr2a (ENSORLG00000016517) ENSORLG00000025698 nfil3-6 (ENSORLG00000016487) ENSORLG00000022104 ENSORLG00000016476 ENSORLG00000027093 ENSORLG00000016438 gcdhb (ENSORLG00000016423) ENSORLG00000016414 farsa (ENSORLG00000016406) ilf3b (ENSORLG00000016379) ENSORLG00000022416 ##22 ptger1b (ENSORLG00000016366) ENSORLG00000023912 pglyrp6 (ENSORLG00000016356) trappc5 (ENSORLG00000025442) ENSORLG00000016346 ENSORLG00000030221 ENSORLG00000022678 pkn1b (ENSORLG00000016312) ENSORLG00000016288 ENSORLG00000026263 ENSORLG00000016274 trir (ENSORLG00000016259) ubn2b (ENSORLG00000016256) rpsa (ENSORLG00000016251) slc25a38a (ENSORLG00000016238)