Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Amniota	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Mammalia	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Theria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Eutheria	ANCESTRAL SPECIES	24	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Glires	ANCESTRAL SPECIES	25	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661	ENSGT00940000159808
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273
Muroidea	ANCESTRAL SPECIES	32	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273
Murinae	ANCESTRAL SPECIES	25	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.b ##30	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000160763 #31	ENSGT00940000160217 #32	ENSGT01100000263494.a.a.a.a.a.d.b.c #33	ENSGT01100000263494.a.a.a.a.a.d.a.q ##36	ENSGT01100000263494.a.a.a.a.a.d.a.r #35
Mus	ANCESTRAL SPECIES	15	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.b ##30	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30
Shrew mouse	MODERN SPECIES	22	Tbxa2r (MGP_PahariEiJ_G0031047) #7	Gipc3 (MGP_PahariEiJ_G0031048) #8	Hmg20b (MGP_PahariEiJ_G0031049) #9	Mfsd12 (MGP_PahariEiJ_G0031050) #10	Tektip1 (MGP_PahariEiJ_G0031051) #11	Fzr1 (MGP_PahariEiJ_G0031052) #12	MGP_PahariEiJ_G0031053 #13	Smim24 (MGP_PahariEiJ_G0031054) #14	Nfic (MGP_PahariEiJ_G0031055) #15	Celf5 (MGP_PahariEiJ_G0031056) #16	Ncln (MGP_PahariEiJ_G0031057) #17	S1pr4 (MGP_PahariEiJ_G0031058) #18	Gna15 (MGP_PahariEiJ_G0031059) #19	Gna11 (MGP_PahariEiJ_G0031060) #20	Tle5 (MGP_PahariEiJ_G0031061) #21	Tle2 (MGP_PahariEiJ_G0031062) #22	MGP_PahariEiJ_G0031063 #23	MGP_PahariEiJ_G0031064 #24	Sirt6 (MGP_PahariEiJ_G0031065) #25	Ankrd24 (MGP_PahariEiJ_G0031066) #26	MGP_PahariEiJ_G0031067 #27	MGP_PahariEiJ_G0031068 #28	AU041133 (MGP_PahariEiJ_G0031069) #29	MGP_PahariEiJ_G0031070 #30	Tespa1 (MGP_PahariEiJ_G0031071) #31	Neurod4 (MGP_PahariEiJ_G0031072) #32	Or9k7 (MGP_PahariEiJ_G0031073) #33	MGP_PahariEiJ_G0031074 #34	MGP_PahariEiJ_G0031075 #35	MGP_PahariEiJ_G0031076 #36	Or6c74 (MGP_PahariEiJ_G0031077) #37
Mus_A	ANCESTRAL SPECIES	11	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000173873	ENSGT00390000000987	ENSGT00940000158078	ENSGT00940000160733	ENSGT00940000154917
Ryukyu mouse	MODERN SPECIES	1	Tbxa2r (MGP_CAROLIEiJ_G0015634) #7	Gipc3 (MGP_CAROLIEiJ_G0015635) #8	Hmg20b (MGP_CAROLIEiJ_G0015636) #9	Mfsd12 (MGP_CAROLIEiJ_G0015637) #10	Tektip1 (MGP_CAROLIEiJ_G0015638) #11	Fzr1 (MGP_CAROLIEiJ_G0015639) #12	MGP_CAROLIEiJ_G0015640 #13	Smim24 (MGP_CAROLIEiJ_G0015641) #14	Nfic (MGP_CAROLIEiJ_G0015642) #15	Celf5 (MGP_CAROLIEiJ_G0015643) #16	Ncln (MGP_CAROLIEiJ_G0015644) #17	S1pr4 (MGP_CAROLIEiJ_G0015645) #18	Gna15 (MGP_CAROLIEiJ_G0015646) #19	Gna11 (MGP_CAROLIEiJ_G0015647) #20	Tle5 (MGP_CAROLIEiJ_G0015648) #21	Tle2 (MGP_CAROLIEiJ_G0015649) #22	MGP_CAROLIEiJ_G0015650 #23	BC025920 (MGP_CAROLIEiJ_G0015651) #24	Sirt6 (MGP_CAROLIEiJ_G0015652) #25	Ankrd24 (MGP_CAROLIEiJ_G0015653) #26	MGP_CAROLIEiJ_G0015654 ##30	MGP_CAROLIEiJ_G0015655 #27	Zfp873 (MGP_CAROLIEiJ_G0015656) #28	MGP_CAROLIEiJ_G0015657	AU041133 (MGP_CAROLIEiJ_G0015658) #29	Zfp938 (MGP_CAROLIEiJ_G0015659) #30	MGP_CAROLIEiJ_G0015660 ##30	MGP_CAROLIEiJ_G0015661	Tdg (MGP_CAROLIEiJ_G0015662)	Glt8d2 (MGP_CAROLIEiJ_G0015663)	Hcfc2 (MGP_CAROLIEiJ_G0015664)
Mus_B	ANCESTRAL SPECIES	10	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00700000104587	ENSGT00860000135672	ENSGT00940000173873	ENSGT00390000000987	ENSGT00940000158078
Mouse	MODERN SPECIES	1	Hmg20b (ENSMUSG00000020232) #9	Mfsd12 (ENSMUSG00000034854) #10	Tektip1 (ENSMUSG00000020234) #11	Fzr1 (ENSMUSG00000020235) #12	Dohh (ENSMUSG00000078440) #13	Gm48551 (ENSMUSG00000113262)	Gm48552 (ENSMUSG00000114004)	Smim24 (ENSMUSG00000078439) #14	Nfic (ENSMUSG00000055053) #15	Celf5 (ENSMUSG00000034818) #16	Ncln (ENSMUSG00000020238) #17	S1pr4 (ENSMUSG00000044199) #18	Gna15 (ENSMUSG00000034792) #19	Gna11 (ENSMUSG00000034781) #20	Tle5 (ENSMUSG00000054452) #21	Tle2 (ENSMUSG00000034771) #22	Tle6 (ENSMUSG00000034758) ##22	BC025920 (ENSMUSG00000074862) #24	Sirt6 (ENSMUSG00000034748) #25	Ankrd24 (ENSMUSG00000054708) #26	Gm10778 (ENSMUSG00000096856) ##30	Zfp433 (ENSMUSG00000096795) #27	Gm3055 (ENSMUSG00000094622)	Gm4767 (ENSMUSG00000094076) ##30	Gm32687 (ENSMUSG00000112640) #27	Zfp781 (ENSMUSG00000096718)	Zfp873 (ENSMUSG00000061371) #28	BC024063 (ENSMUSG00000112160)	AU041133 (ENSMUSG00000078435) #29	Zfp938 (ENSMUSG00000062931) #30	4932415D10Rik (ENSMUSG00000044581)
Mus_C	ANCESTRAL SPECIES	7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00700000104587	ENSGT00860000135672	ENSGT00390000007685	ENSGT00390000000987	ENSGT00940000158078
Steppe mouse	MODERN SPECIES	1558																Tle2 (ENSMSIG00000029418) #22	Tle6 (ENSMSIG00000029444) ##22	Sirt6 (ENSMSIG00000029480) #25	Ankrd24 (ENSMSIG00000029491) #26
spretus	MODERN SPECIES	1	Tbxa2r (MGP_SPRETEiJ_G0016452) #7	Gipc3 (MGP_SPRETEiJ_G0016453) #8	Hmg20b (MGP_SPRETEiJ_G0016454) #9	Mfsd12 (MGP_SPRETEiJ_G0016455) #10	Tektip1 (MGP_SPRETEiJ_G0016456) #11	Fzr1 (MGP_SPRETEiJ_G0016457) #12	Dohh (MGP_SPRETEiJ_G0016458) #13	Smim24 (MGP_SPRETEiJ_G0016459) #14	Nfic (MGP_SPRETEiJ_G0016460) #15	Celf5 (MGP_SPRETEiJ_G0016461) #16	MGP_SPRETEiJ_G0016462 #17	S1pr4 (MGP_SPRETEiJ_G0016463) #18	Gna15 (MGP_SPRETEiJ_G0016464) #19	Gna11 (MGP_SPRETEiJ_G0016465) #20	Tle5 (MGP_SPRETEiJ_G0016466) #21	Tle2 (MGP_SPRETEiJ_G0016467) #22	Tle6 (MGP_SPRETEiJ_G0016468) ##22	BC025920 (MGP_SPRETEiJ_G0016469) #24	Sirt6 (MGP_SPRETEiJ_G0016470) #25	Ankrd24 (MGP_SPRETEiJ_G0016471) #26	MGP_SPRETEiJ_G0016472 ##30	MGP_SPRETEiJ_G0016473 #27	Zfp873 (MGP_SPRETEiJ_G0016474) #28	MGP_SPRETEiJ_G0016475	AU041133 (MGP_SPRETEiJ_G0016476) #29	Zfp938 (MGP_SPRETEiJ_G0016477) #30	MGP_SPRETEiJ_G0016478	Gm1553 (MGP_SPRETEiJ_G0016479)	Tdg (MGP_SPRETEiJ_G0016480)	Glt8d2 (MGP_SPRETEiJ_G0016481)	Hcfc2 (MGP_SPRETEiJ_G0016482)
Rat	MODERN SPECIES	17	Tbxa2r (ENSRNOG00000020585) #7	Hmg20b (ENSRNOG00000020601) #9	Mfsd12 (ENSRNOG00000039858) #10	Tektip1 (ENSRNOG00000039861) #11	Fzr1 (ENSRNOG00000004169) #12	Dohh (ENSRNOG00000004259) #13	Smim44 (ENSRNOG00000066999)	AC094643.2 (ENSRNOG00000053040)	Nfic (ENSRNOG00000004505) #15	Celf5 (ENSRNOG00000004695) #16	Ncln (ENSRNOG00000004793) #17	S1pr4 (ENSRNOG00000005370) #18	Gna15 (ENSRNOG00000005378) #19	Gna11 (ENSRNOG00000005446) #20	Tle5 (ENSRNOG00000052025) #21	Tle2 (ENSRNOG00000005874) #22	Tle6 (ENSRNOG00000006350) ##22	Sirt6 (ENSRNOG00000006393) #25	Ankrd24 (ENSRNOG00000006759) #26	LOC100125368 (ENSRNOG00000068608) ##30	LOC100912294 (ENSRNOG00000064426) ##30	LOC100909682 (ENSRNOG00000064149) #27	LOC100912294 (ENSRNOG00000066348) #28	Znf624l (ENSRNOG00000069034)	ENSRNOG00000068241	ENSRNOG00000065149	Zfp709l1 (ENSRNOG00000066372) #29	LOC102550657 (ENSRNOG00000062931) #29	Zfp347 (ENSRNOG00000071023) #28	ENSRNOG00000067221	ENSRNOG00000069098
Cricetidae	ANCESTRAL SPECIES	25	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237.eb #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000160088 #25	ENSGT00940000159237.db.a #26	ENSGT00940000153805.q.a.a.a #28
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	764	Tbxa2r (ENSMAUG00000015276) #7	Gipc3 (ENSMAUG00000021524) #8	Hmg20b (ENSMAUG00000020413) #9	Mfsd12 (ENSMAUG00000009940) #10	Tektip1 (ENSMAUG00000010716) #11	Fzr1 (ENSMAUG00000000921) #12	Dohh (ENSMAUG00000008351) #13	Smim24 (ENSMAUG00000002297) #14	Nfic (ENSMAUG00000018380) #15	ENSMAUG00000020336	Ncln (ENSMAUG00000015425) #17	S1pr4 (ENSMAUG00000008594) #18	Gna15 (ENSMAUG00000016578) #19	Gna11 (ENSMAUG00000004382) #20	Tle5 (ENSMAUG00000020765) #21	ENSMAUG00000013065 #22	ENSMAUG00000010830 #22	Tle6 (ENSMAUG00000010384) ##22	Sirt6 (ENSMAUG00000021546) #25	ENSMAUG00000008197 #26	ENSMAUG00000009986 #26	ENSMAUG00000011554 #28	ENSMAUG00000000940 ##30	ENSMAUG00000021079
Golden Hamster	MODERN SPECIES	764	Gipc3 (ENSMAUG00000021524) #8	Hmg20b (ENSMAUG00000020413) #9	Mfsd12 (ENSMAUG00000009940) #10	Tektip1 (ENSMAUG00000010716) #11	Fzr1 (ENSMAUG00000000921) #12	Dohh (ENSMAUG00000008351) #13	Smim24 (ENSMAUG00000002297) #14	Nfic (ENSMAUG00000018380) #15	ENSMAUG00000020336	Ncln (ENSMAUG00000015425) #17	S1pr4 (ENSMAUG00000008594) #18	Gna15 (ENSMAUG00000016578) #19	Gna11 (ENSMAUG00000004382) #20	Tle5 (ENSMAUG00000020765) #21	ENSMAUG00000013065 #22	ENSMAUG00000010830 #22	Tle6 (ENSMAUG00000010384) ##22	Sirt6 (ENSMAUG00000021546) #25	ENSMAUG00000008197 #26	ENSMAUG00000009986 #26	ENSMAUG00000011554 #28	ENSMAUG00000000940 ##30	ENSMAUG00000021079
Chinese hamster chok1gshd	MODERN SPECIES	2	Tbxa2r (ENSCGRG00001014446) #7	Gipc3 (ENSCGRG00001016082) #8	Hmg20b (ENSCGRG00001016795) #9	Mfsd12 (ENSCGRG00001018366) #10	Tektip1 (ENSCGRG00001012954) #11	Fzr1 (ENSCGRG00001015616) #12	DOHH (ENSCGRG00001018617) #13	Smim24 (ENSCGRG00001024709) #14	Nfic (ENSCGRG00001015960) #15	ENSCGRG00001002551	Ncln (ENSCGRG00001014212) #17	S1pr4 (ENSCGRG00001009743) #18	Gna15 (ENSCGRG00001019244) #19	Gna11 (ENSCGRG00001021073) #20	Tle5 (ENSCGRG00001011131) #21	Tle2 (ENSCGRG00001015962) #22	Tle6 (ENSCGRG00001023857) ##22	Sirt6 (ENSCGRG00001001515) #25	Ankrd24 (ENSCGRG00001010168) #26	ENSCGRG00001014612 #28	ENSCGRG00001015466	ENSCGRG00001000615	ENSCGRG00001004162	Ddx24 (ENSCGRG00001009522)	Otub2 (ENSCGRG00001012574)	Asb2 (ENSCGRG00001018202)	Fam181a (ENSCGRG00001009594)	Prima1 (ENSCGRG00001020834)	Unc79 (ENSCGRG00001017548)	Cox8c (ENSCGRG00001023352)	Btbd7 (ENSCGRG00001024139)
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237.eb #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f
Northern American deer mouse	MODERN SPECIES	14	Hmg20b (ENSPEMG00000014935) #9	Mfsd12 (ENSPEMG00000020766) #10	Tektip1 (ENSPEMG00000029958) #11	Fzr1 (ENSPEMG00000020284) #12	ENSPEMG00000014213 #13	Smim24 (ENSPEMG00000021225) #14	ENSPEMG00000028186	Nfic (ENSPEMG00000022565) #15	ENSPEMG00000030211	Celf5 (ENSPEMG00000021763) #16	Ncln (ENSPEMG00000001818) #17	S1pr4 (ENSPEMG00000007107) #18	Gna15 (ENSPEMG00000022124) #19	Gna11 (ENSPEMG00000020340) #20	Tle5 (ENSPEMG00000022384) #21	Tle2 (ENSPEMG00000023812) #22	Tle6 (ENSPEMG00000023765) ##22	ENSPEMG00000015555 #24	Sirt6 (ENSPEMG00000030025) #25	Ankrd24 (ENSPEMG00000023820) #26	ENSPEMG00000007616 ##30	ENSPEMG00000015235	ENSPEMG00000016925	ENSPEMG00000012935	ENSPEMG00000025396	Ebi3 (ENSPEMG00000017922)	Yju2 (ENSPEMG00000018282)	Shd (ENSPEMG00000009120)	ENSPEMG00000027526	Fsd1 (ENSPEMG00000020510)	Stap2 (ENSPEMG00000017988)
Prairie vole	MODERN SPECIES	349	Tbxa2r (ENSMOCG00000005701) #7	Gipc3 (ENSMOCG00000002475) #8	Hmg20b (ENSMOCG00000001874) #9	Mfsd12 (ENSMOCG00000020987) #10	Tektip1 (ENSMOCG00000017658) #11	Fzr1 (ENSMOCG00000012552) #12	Dohh (ENSMOCG00000014902) #13	Smim24 (ENSMOCG00000012959) #14	Nfic (ENSMOCG00000021133) #15	ENSMOCG00000005573	Ncln (ENSMOCG00000010643) #17	S1pr4 (ENSMOCG00000001385) #18	Gna15 (ENSMOCG00000007607) #19	Gna11 (ENSMOCG00000001264) #20	ENSMOCG00000020375 #21	Tle2 (ENSMOCG00000021122) #22	Tle6 (ENSMOCG00000021233) ##22	Sirt6 (ENSMOCG00000020031) #25	ENSMOCG00000016411	ENSMOCG00000002022 #26	ENSMOCG00000017715 #28	ENSMOCG00000012194	ENSMOCG00000006053	ENSMOCG00000007188
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Cactin (ENSNGAG00000020699)	Tbxa2r (ENSNGAG00000023199) #7	Gipc3 (ENSNGAG00000022438) #8	Hmg20b (ENSNGAG00000022055) #9	Mfsd12 (ENSNGAG00000021286) #10	Fzr1 (ENSNGAG00000019979) #12	Dohh (ENSNGAG00000023202) #13	Smim24 (ENSNGAG00000020934) #14	Nfic (ENSNGAG00000021483) #15	ENSNGAG00000019694 #16	Ncln (ENSNGAG00000023405) #17	S1pr4 (ENSNGAG00000014520) #18	Gna15 (ENSNGAG00000022090) #19	Gna11 (ENSNGAG00000018151) #20	Tle5 (ENSNGAG00000023222) #21	ENSNGAG00000019164 #22	ENSNGAG00000009655 #22	ENSNGAG00000022046 ##22	Sirt6 (ENSNGAG00000022728) #25	ENSNGAG00000014424	ENSNGAG00000019241 #26	Ebi3 (ENSNGAG00000023241)	Yju2 (ENSNGAG00000019627)	Shd (ENSNGAG00000003012)	Fsd1 (ENSNGAG00000021877)	Stap2 (ENSNGAG00000021317)	Mpnd (ENSNGAG00000022278)	Sh3gl1 (ENSNGAG00000022192)	Chaf1a (ENSNGAG00000020900)	Ubxn6 (ENSNGAG00000020979)	ENSNGAG00000021303
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Tbxa2r (ENSNGAG00000023199) #7	Gipc3 (ENSNGAG00000022438) #8	Hmg20b (ENSNGAG00000022055) #9	Mfsd12 (ENSNGAG00000021286) #10	Fzr1 (ENSNGAG00000019979) #12	Dohh (ENSNGAG00000023202) #13	Smim24 (ENSNGAG00000020934) #14	Nfic (ENSNGAG00000021483) #15	ENSNGAG00000019694 #16	Ncln (ENSNGAG00000023405) #17	S1pr4 (ENSNGAG00000014520) #18	Gna15 (ENSNGAG00000022090) #19	Gna11 (ENSNGAG00000018151) #20	Tle5 (ENSNGAG00000023222) #21	ENSNGAG00000019164 #22	ENSNGAG00000009655 #22	ENSNGAG00000022046 ##22	Sirt6 (ENSNGAG00000022728) #25	ENSNGAG00000014424	ENSNGAG00000019241 #26	Ebi3 (ENSNGAG00000023241)	Yju2 (ENSNGAG00000019627)	Shd (ENSNGAG00000003012)	Fsd1 (ENSNGAG00000021877)	Stap2 (ENSNGAG00000021317)	Mpnd (ENSNGAG00000022278)	Sh3gl1 (ENSNGAG00000022192)	Chaf1a (ENSNGAG00000020900)	Ubxn6 (ENSNGAG00000020979)	ENSNGAG00000021303	ENSNGAG00000022527
Lesser Egyptian jerboa	DUPLICATION
Lesser Egyptian jerboa	MODERN SPECIES	55	Tbxa2r (ENSJJAG00000015378) #7	Hmg20b (ENSJJAG00000014863) #9	Mfsd12 (ENSJJAG00000023170) #10	ENSJJAG00000014542 #11	Fzr1 (ENSJJAG00000007462) #12	Dohh (ENSJJAG00000023778) #13	Smim24 (ENSJJAG00000001987) #14	Nfic (ENSJJAG00000014906) #15	ENSJJAG00000006902	Ncln (ENSJJAG00000004276) #17	S1pr4 (ENSJJAG00000000603) #18	Gna15 (ENSJJAG00000013894) #19	Gna11 (ENSJJAG00000018855) #20	Tle5 (ENSJJAG00000015784) #21	ENSJJAG00000023070 #22	ENSJJAG00000012399 #22	Sirt6 (ENSJJAG00000016800) #25	ENSJJAG00000011418 #26	Ebi3 (ENSJJAG00000012268)	Yju2 (ENSJJAG00000023448)	Shd (ENSJJAG00000022632)	Fsd1 (ENSJJAG00000012326)	Stap2 (ENSJJAG00000019818)	Mpnd (ENSJJAG00000011677)	Sh3gl1 (ENSJJAG00000023551)	Chaf1a (ENSJJAG00000023703)	Ubxn6 (ENSJJAG00000019017)	Hdgfl2 (ENSJJAG00000017363)	ENSJJAG00000022653	Plin5 (ENSJJAG00000023502)	Lrg1 (ENSJJAG00000017118)
Lesser Egyptian jerboa	MODERN SPECIES	55	Cactin (ENSJJAG00000021015)	Tbxa2r (ENSJJAG00000015378) #7	Hmg20b (ENSJJAG00000014863) #9	Mfsd12 (ENSJJAG00000023170) #10	ENSJJAG00000014542 #11	Fzr1 (ENSJJAG00000007462) #12	Dohh (ENSJJAG00000023778) #13	Smim24 (ENSJJAG00000001987) #14	Nfic (ENSJJAG00000014906) #15	ENSJJAG00000006902	Ncln (ENSJJAG00000004276) #17	S1pr4 (ENSJJAG00000000603) #18	Gna15 (ENSJJAG00000013894) #19	Gna11 (ENSJJAG00000018855) #20	Tle5 (ENSJJAG00000015784) #21	ENSJJAG00000023070 #22	ENSJJAG00000012399 #22	Sirt6 (ENSJJAG00000016800) #25	ENSJJAG00000011418 #26	Ebi3 (ENSJJAG00000012268)	Yju2 (ENSJJAG00000023448)	Shd (ENSJJAG00000022632)	Fsd1 (ENSJJAG00000012326)	Stap2 (ENSJJAG00000019818)	Mpnd (ENSJJAG00000011677)	Sh3gl1 (ENSJJAG00000023551)	Chaf1a (ENSJJAG00000023703)	Ubxn6 (ENSJJAG00000019017)	Hdgfl2 (ENSJJAG00000017363)	ENSJJAG00000022653	Plin5 (ENSJJAG00000023502)
Kangaroo rat	MODERN SPECIES	383	Tbxa2r (ENSDORG00000004093) #7	Gipc3 (ENSDORG00000027124) #8	ENSDORG00000030007 #9	Mfsd12 (ENSDORG00000012597) #10	ENSDORG00000012596 #11	Fzr1 (ENSDORG00000012595) #12	ENSDORG00000024291	Smim24 (ENSDORG00000028789) #14	Nfic (ENSDORG00000002466) #15	ENSDORG00000005915	Ncln (ENSDORG00000009779) #17	S1pr4 (ENSDORG00000029034) #18	Gna15 (ENSDORG00000008491) #19	Gna11 (ENSDORG00000025425) #20	Tle5 (ENSDORG00000029584) #21	ENSDORG00000025434 #22	Thop1 (ENSDORG00000008967)	Sgta (ENSDORG00000009907)	Slc39a3 (ENSDORG00000029412)	Diras1 (ENSDORG00000006599)	Gng7 (ENSDORG00000001766)	Gadd45b (ENSDORG00000025421)	Lmnb2 (ENSDORG00000002602)	Timm13 (ENSDORG00000015661)	Tmprss9 (ENSDORG00000002599)	Sppl2b (ENSDORG00000004034)	Lsm7 (ENSDORG00000024460)	Atcay (ENSDORG00000000661)	ENSDORG00000012226	Eef2 (ENSDORG00000012229)	Pias4 (ENSDORG00000002710)
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000046308	ENSHGLG00000044420	ENSHGLG00000049463	ENSHGLG00000035026	ENSHGLG00000044227	ENSHGLG00000032960	ENSHGLG00000032173	ENSHGLG00000034587	ENSHGLG00000002680	ENSHGLG00000040658	ENSHGLG00000010518 #17	S1PR4 (ENSHGLG00000042045) #18	GNA15 (ENSHGLG00000033945) #19	GNA11 (ENSHGLG00000035049) #20	AES (ENSHGLG00000036417) #21	TLE2 (ENSHGLG00000013600) #22	ENSHGLG00000037855 ##22	ENSHGLG00000049208	ENSHGLG00000016167	FZR1 (ENSHGLG00000019224) #12	ENSHGLG00000014588 #10	ENSHGLG00000033274 #11	HMG20B (ENSHGLG00000015242) #9	GIPC3 (ENSHGLG00000016188) #8	TBXA2R (ENSHGLG00000012829) #7	CACTIN (ENSHGLG00000016228)	ENSHGLG00000016360	TJP3 (ENSHGLG00000014455)	APBA3 (ENSHGLG00000014560)	MRPL54 (ENSHGLG00000006157)	MATK (ENSHGLG00000006614)
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842
Guinea pig	MODERN SPECIES	288													ENSCPOG00000004974 #19	GNA11 (ENSCPOG00000036119) #20	TLE5 (ENSCPOG00000036640) #21	TLE2 (ENSCPOG00000004144) #22	FZR1 (ENSCPOG00000019570) #12	TEKTIP1 (ENSCPOG00000024460) #11	MFSD12 (ENSCPOG00000009074) #10	HMG20B (ENSCPOG00000010777) #9	GIPC3 (ENSCPOG00000023224) #8	TBXA2R (ENSCPOG00000031050) #7	CACTIN (ENSCPOG00000003880)	PIP5K1C (ENSCPOG00000001951)
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT00950000182965.b.fb	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364
Long-tailed chinchilla	MODERN SPECIES	202	LMNB2 (ENSCLAG00000007920)	GADD45B (ENSCLAG00000008923)	GNG7 (ENSCLAG00000009115)	DIRAS1 (ENSCLAG00000017925)	SGTA (ENSCLAG00000010647)	THOP1 (ENSCLAG00000015063)	DOHH (ENSCLAG00000007817) #13	SMIM24 (ENSCLAG00000007177) #14	NFIC (ENSCLAG00000007526) #15	CELF5 (ENSCLAG00000009940) #16	NCLN (ENSCLAG00000008645) #17	S1PR4 (ENSCLAG00000017878) #18	GNA15 (ENSCLAG00000009774) #19	GNA11 (ENSCLAG00000010957) #20	TLE5 (ENSCLAG00000015307) #21	TLE2 (ENSCLAG00000007966) #22	ENSCLAG00000014106	FZR1 (ENSCLAG00000014081) #12	TEKTIP1 (ENSCLAG00000009360) #11	MFSD12 (ENSCLAG00000008160) #10	HMG20B (ENSCLAG00000012030) #9	GIPC3 (ENSCLAG00000009638) #8	TBXA2R (ENSCLAG00000010610) #7	CACTIN (ENSCLAG00000010714)	PIP5K1C (ENSCLAG00000011318)	TJP3 (ENSCLAG00000008035)	APBA3 (ENSCLAG00000010718)	MRPL54 (ENSCLAG00000007908)	MATK (ENSCLAG00000008473)	ZFR2 (ENSCLAG00000010137)	ATCAY (ENSCLAG00000013570)
Degu	MODERN SPECIES	91	DIRAS1 (ENSODEG00000020412)	SLC39A3 (ENSODEG00000014274)	SGTA (ENSODEG00000014332)	THOP1 (ENSODEG00000013736)	ENSODEG00000013996	DOHH (ENSODEG00000014181) #13	ENSODEG00000015846 #14	NFIC (ENSODEG00000015267) #15	CELF5 (ENSODEG00000014460) #16	NCLN (ENSODEG00000013853) #17	S1PR4 (ENSODEG00000020319) #18	GNA15 (ENSODEG00000014085) #19	GNA11 (ENSODEG00000015009) #20	ENSODEG00000020164	ENSODEG00000014482 #21	TLE2 (ENSODEG00000014073) #22	ENSODEG00000013786	FZR1 (ENSODEG00000014514) #12	TEKTIP1 (ENSODEG00000013282) #11	MFSD12 (ENSODEG00000014260) #10	HMG20B (ENSODEG00000014653) #9	GIPC3 (ENSODEG00000013296) #8	TBXA2R (ENSODEG00000013384) #7	ENSODEG00000014734	PIP5K1C (ENSODEG00000013830)	TJP3 (ENSODEG00000013512)	APBA3 (ENSODEG00000013581)	MRPL54 (ENSODEG00000013969)	MATK (ENSODEG00000014649)	ATCAY (ENSODEG00000013730)	NMRK2 (ENSODEG00000013977)
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661
Marmotini	ANCESTRAL SPECIES	24	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661
Alpin marmot	DUPLICATION
Alpin marmot	MODERN SPECIES	88	APBA3 (ENSMMMG00000016885)	TJP3 (ENSMMMG00000016855)	CACTIN (ENSMMMG00000016832)	ENSMMMG00000016827	GIPC3 (ENSMMMG00000016813) #8	HMG20B (ENSMMMG00000016794) #9	ENSMMMG00000016792 #10	ENSMMMG00000016780 #12	DOHH (ENSMMMG00000016778) #13	ENSMMMG00000016774 #11	ENSMMMG00000016765	ENSMMMG00000016760 #16	ENSMMMG00000016752 #19	GNA11 (ENSMMMG00000016538) #20	ENSMMMG00000016526 #22	ENSMMMG00000016524 #22	ZNF77 (ENSMMMG00000016522) #24	ENSMMMG00000016520	THOP1 (ENSMMMG00000016515)	SGTA (ENSMMMG00000016510)	SLC39A3 (ENSMMMG00000016507)	DIRAS1 (ENSMMMG00000016506)	GNG7 (ENSMMMG00000016505)	GADD45B (ENSMMMG00000016502)	ENSMMMG00000016497	ENSMMMG00000016490	ENSMMMG00000016486	OAZ1 (ENSMMMG00000016480)	ENSMMMG00000016473	PLEKHJ1 (ENSMMMG00000016470)	DOT1L (ENSMMMG00000016365)
Alpin marmot	MODERN SPECIES	88	ZFR2 (ENSMMMG00000016959)	APBA3 (ENSMMMG00000016885)	TJP3 (ENSMMMG00000016855)	CACTIN (ENSMMMG00000016832)	ENSMMMG00000016827	GIPC3 (ENSMMMG00000016813) #8	HMG20B (ENSMMMG00000016794) #9	ENSMMMG00000016792 #10	ENSMMMG00000016780 #12	DOHH (ENSMMMG00000016778) #13	ENSMMMG00000016774 #11	ENSMMMG00000016765	ENSMMMG00000016760 #16	ENSMMMG00000016752 #19	GNA11 (ENSMMMG00000016538) #20	ENSMMMG00000016526 #22	ENSMMMG00000016524 #22	ZNF77 (ENSMMMG00000016522) #24	ENSMMMG00000016520	THOP1 (ENSMMMG00000016515)	SGTA (ENSMMMG00000016510)	SLC39A3 (ENSMMMG00000016507)	DIRAS1 (ENSMMMG00000016506)	GNG7 (ENSMMMG00000016505)	GADD45B (ENSMMMG00000016502)	ENSMMMG00000016497	ENSMMMG00000016490	ENSMMMG00000016486	OAZ1 (ENSMMMG00000016480)	ENSMMMG00000016473	PLEKHJ1 (ENSMMMG00000016470)
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661	ENSGT00940000159808
Squirrel	MODERN SPECIES	188	TBXA2R (ENSSTOG00000028290) #7	GIPC3 (ENSSTOG00000007215) #8	HMG20B (ENSSTOG00000022314) #9	MFSD12 (ENSSTOG00000002823) #10	TEKTIP1 (ENSSTOG00000026760) #11	FZR1 (ENSSTOG00000002807) #12	DOHH (ENSSTOG00000023074) #13	SMIM24 (ENSSTOG00000030174) #14	NFIC (ENSSTOG00000024218) #15	CELF5 (ENSSTOG00000002384) #16	NCLN (ENSSTOG00000022427) #17	S1PR4 (ENSSTOG00000024766) #18	GNA15 (ENSSTOG00000021930) #19	GNA11 (ENSSTOG00000019951) #20	TLE5 (ENSSTOG00000028243) #21	TLE2 (ENSSTOG00000011134) #22	ZNF77 (ENSSTOG00000034105) #24	THOP1 (ENSSTOG00000006054)	SGTA (ENSSTOG00000013262)	SLC39A3 (ENSSTOG00000008404)	DIRAS1 (ENSSTOG00000032129)	GNG7 (ENSSTOG00000029016)	GADD45B (ENSSTOG00000027321)	LMNB2 (ENSSTOG00000027596)	TIMM13 (ENSSTOG00000019582)	TMPRSS9 (ENSSTOG00000023252)	SPPL2B (ENSSTOG00000022987)	LSM7 (ENSSTOG00000028372)	LINGO3 (ENSSTOG00000029056)	Oaz1 (ENSSTOG00000026489)	JSRP1 (ENSSTOG00000002885)
Arctic ground squirrel	MODERN SPECIES	301	GIPC3 (ENSUPAG00010008525) #8	HMG20B (ENSUPAG00010008513) #9	MFSD12 (ENSUPAG00010008498) #10	TEKTIP1 (ENSUPAG00010008492) #11	FZR1 (ENSUPAG00010008472) #12	DOHH (ENSUPAG00010008461) #13	SMIM44 (ENSUPAG00010008452)	ENSUPAG00010008444 #14	NFIC (ENSUPAG00010008410) #15	ENSUPAG00010008374	NCLN (ENSUPAG00010008331) #17	S1PR4 (ENSUPAG00010008324) #18	GNA15 (ENSUPAG00010008318) #19	GNA11 (ENSUPAG00010008291) #20	TLE5 (ENSUPAG00010008263) #21	TLE2 (ENSUPAG00010008216) #22	ENSUPAG00010008199 ##22	ZNF77 (ENSUPAG00010008190) #24
Eurasian red squirrel	MODERN SPECIES	7	TBXA2R (ENSSVLG00005023817) #7	GIPC3 (ENSSVLG00005023804) #8	HMG20B (ENSSVLG00005023762) #9	MFSD12 (ENSSVLG00005023702) #10	TEKTIP1 (ENSSVLG00005023668) #11	FZR1 (ENSSVLG00005023633) #12	DOHH (ENSSVLG00005023586) #13	ENSSVLG00005023514	NFIC (ENSSVLG00005023336) #15	CELF5 (ENSSVLG00005023165) #16	NCLN (ENSSVLG00005023124) #17	S1PR4 (ENSSVLG00005023097) #18	GNA15 (ENSSVLG00005023052) #19	GNA11 (ENSSVLG00005023021) #20	TLE5 (ENSSVLG00005022954) #21	TLE2 (ENSSVLG00005022632) #22	ENSSVLG00005022518 ##22	ZNF77 (ENSSVLG00005022489) #24	ZNF556 (ENSSVLG00005022445)	THOP1 (ENSSVLG00005022285)	SGTA (ENSSVLG00005022255)	SLC39A3 (ENSSVLG00005022209)	GNG7 (ENSSVLG00005022168)	ENSSVLG00005022148	ENSSVLG00005022082	LMNB2 (ENSSVLG00005021950)	TIMM13 (ENSSVLG00005021893)	TMPRSS9 (ENSSVLG00005021697)	SPPL2B (ENSSVLG00005021399)	LSM7 (ENSSVLG00005021294)	LINGO3 (ENSSVLG00005021278)
Lagomorpha	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Pika	MODERN SPECIES	3421																TLE2 (ENSOPRG00000001843) #22
Tree shrew	MODERN SPECIES	4009																ENSTBEG00000003187 #22
Primates	ANCESTRAL SPECIES	18	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Hominidae	ANCESTRAL SPECIES		ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033.c #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033.c.a #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Gorilla	MODERN SPECIES	10	GIPC3 (ENSGGOG00000027202) #8	HMG20B (ENSGGOG00000014805) #9	MFSD12 (ENSGGOG00000002205) #10	TEKTIP1 (ENSGGOG00000002202) #11	FZR1 (ENSGGOG00000002200) #12	ENSGGOG00000011214 #13	SMIM44 (ENSGGOG00000036474)	ENSGGOG00000038229	NFIC (ENSGGOG00000006557) #15	ENSGGOG00000041211	NCLN (ENSGGOG00000010398) #17	GNA15 (ENSGGOG00000003077) #19	ENSGGOG00000040253	GNA11 (ENSGGOG00000014995) #20	ENSGGOG00000010731 #21	TLE2 (ENSGGOG00000014765) #22	TLE6 (ENSGGOG00000014760) ##22	ZNF77 (ENSGGOG00000010217) #24	ZNF57 (ENSGGOG00000006285)	ZNF556 (ENSGGOG00000008748)	ENSGGOG00000001761	ZNF554 (ENSGGOG00000026098)	THOP1 (ENSGGOG00000007922)	SGTA (ENSGGOG00000007913)	SLC39A3 (ENSGGOG00000039245)	DIRAS1 (ENSGGOG00000004553)	GNG7 (ENSGGOG00000042768)	GADD45B (ENSGGOG00000028478)	ENSGGOG00000040102	LMNB2 (ENSGGOG00000003462)	TIMM13 (ENSGGOG00000003459)
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033.c.a #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Pan	DUPLICATION
Pan	ANCESTRAL SPECIES	14	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033.c.a #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Bonobo	MODERN SPECIES	10	TBXA2R (ENSPPAG00000033099) #7	GIPC3 (ENSPPAG00000005107) #8	HMG20B (ENSPPAG00000042698) #9	MFSD12 (ENSPPAG00000040119) #10	TEKTIP1 (ENSPPAG00000035424) #11	FZR1 (ENSPPAG00000043553) #12	DOHH (ENSPPAG00000004289) #13	SMIM44 (ENSPPAG00000032436)	SMIM24 (ENSPPAG00000041504) #14	NFIC (ENSPPAG00000036536) #15	ENSPPAG00000029786	NCLN (ENSPPAG00000043465) #17	GNA15 (ENSPPAG00000041303) #19	GNA11 (ENSPPAG00000038754) #20	ENSPPAG00000007067 #21	ENSPPAG00000038446 #22	TLE6 (ENSPPAG00000029714) ##22	ZNF77 (ENSPPAG00000031195) #24	ENSPPAG00000028174	ZNF556 (ENSPPAG00000015477)	ZNF555 (ENSPPAG00000042762)	ZNF554 (ENSPPAG00000039331)	THOP1 (ENSPPAG00000032083)	SGTA (ENSPPAG00000018507)	SLC39A3 (ENSPPAG00000043276)	DIRAS1 (ENSPPAG00000003386)	GNG7 (ENSPPAG00000036740)	GADD45B (ENSPPAG00000043714)	ENSPPAG00000015281	LMNB2 (ENSPPAG00000040882)	TIMM13 (ENSPPAG00000035656)
Chimpanzee	MODERN SPECIES	10	GIPC3 (ENSPTRG00000010269) #8	HMG20B (ENSPTRG00000010268) #9	MFSD12 (ENSPTRG00000010267) #10	TEKTIP1 (ENSPTRG00000010265) #11	FZR1 (ENSPTRG00000010264) #12	DOHH (ENSPTRG00000010263) #13	SMIM44 (ENSPTRG00000050433)	SMIM24 (ENSPTRG00000049658) #14	NFIC (ENSPTRG00000010261) #15	CELF5 (ENSPTRG00000010259) #16	NCLN (ENSPTRG00000010258) #17	GNA15 (ENSPTRG00000010256) #19	GNA11 (ENSPTRG00000010254) #20	TLE5 (ENSPTRG00000010253) #21	ENSPTRG00000043065 #22	TLE2 (ENSPTRG00000010252) #22	TLE6 (ENSPTRG00000010250) ##22	ZNF77 (ENSPTRG00000010249) #24	ZNF57 (ENSPTRG00000010248)	ZNF556 (ENSPTRG00000010247)	ZNF555 (ENSPTRG00000010246)	ZNF554 (ENSPTRG00000010245)	THOP1 (ENSPTRG00000010244)	SGTA (ENSPTRG00000010243)	SLC39A3 (ENSPTRG00000010242)	DIRAS1 (ENSPTRG00000029182)	GNG7 (ENSPTRG00000043589)	GADD45B (ENSPTRG00000044298)	ENSPTRG00000044813	LMNB2 (ENSPTRG00000010238)	TIMM13 (ENSPTRG00000010237)
Pan	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.b #22
Chimpanzee	MODERN SPECIES	10	LMNB2 (ENSPTRG00000010238)	ENSPTRG00000044813	GADD45B (ENSPTRG00000044298)	GNG7 (ENSPTRG00000043589)	DIRAS1 (ENSPTRG00000029182)	SLC39A3 (ENSPTRG00000010242)	SGTA (ENSPTRG00000010243)	THOP1 (ENSPTRG00000010244)	ZNF554 (ENSPTRG00000010245)	ZNF555 (ENSPTRG00000010246)	ZNF556 (ENSPTRG00000010247)	ZNF57 (ENSPTRG00000010248)	ZNF77 (ENSPTRG00000010249) #24	TLE6 (ENSPTRG00000010250) ##22	TLE2 (ENSPTRG00000010252) #22	ENSPTRG00000043065 #22	TLE5 (ENSPTRG00000010253) #21	GNA11 (ENSPTRG00000010254) #20	GNA15 (ENSPTRG00000010256) #19	NCLN (ENSPTRG00000010258) #17	CELF5 (ENSPTRG00000010259) #16	NFIC (ENSPTRG00000010261) #15	SMIM24 (ENSPTRG00000049658) #14	SMIM44 (ENSPTRG00000050433)	DOHH (ENSPTRG00000010263) #13	FZR1 (ENSPTRG00000010264) #12	TEKTIP1 (ENSPTRG00000010265) #11	MFSD12 (ENSPTRG00000010267) #10	HMG20B (ENSPTRG00000010268) #9	GIPC3 (ENSPTRG00000010269) #8	TBXA2R (ENSPTRG00000050832) #7
Bonobo	MODERN SPECIES	182																ENSPPAG00000027458 #22
Human	MODERN SPECIES	10	GIPC3 (ENSG00000179855) #8	HMG20B (ENSG00000064961) #9	TEKTIP1 (ENSG00000183397) #11	MFSD12 (ENSG00000161091) #10	FZR1 (ENSG00000105325) #12	DOHH (ENSG00000129932) #13	SMIM44 (ENSG00000284638)	SMIM24 (ENSG00000095932) #14	NFIC (ENSG00000141905) #15	CELF5 (ENSG00000161082) #16	NCLN (ENSG00000125912) #17	S1PR4 (ENSG00000125910) #18	GNA15 (ENSG00000060558) #19	GNA11 (ENSG00000088256) #20	TLE5 (ENSG00000104964) #21	TLE2 (ENSG00000065717) #22	TLE6 (ENSG00000104953) ##22	ZNF77 (ENSG00000175691) #24	ZNF57 (ENSG00000171970)	ZNF556 (ENSG00000172000)	ZNF555 (ENSG00000186300)	ZNF554 (ENSG00000172006)	THOP1 (ENSG00000172009)	SGTA (ENSG00000104969)	SLC39A3 (ENSG00000141873)	ENSG00000267001	DIRAS1 (ENSG00000176490)	GNG7 (ENSG00000176533)	GADD45B (ENSG00000099860)	LMNB2 (ENSG00000176619)	TIMM13 (ENSG00000099800)
Orangutan	MODERN SPECIES	10	HMG20B (ENSPPYG00000009378) #9	MFSD12 (ENSPPYG00000009377) #10	ENSPPYG00000034014	TEKTIP1 (ENSPPYG00000009376) #11	FZR1 (ENSPPYG00000009374) #12	DOHH (ENSPPYG00000009373) #13	SMIM44 (ENSPPYG00000009372)	ENSPPYG00000032854 #14	NFIC (ENSPPYG00000009371) #15	CELF5 (ENSPPYG00000009370) #16	NCLN (ENSPPYG00000009369) #17	S1PR4 (ENSPPYG00000009368) #18	GNA15 (ENSPPYG00000009367) #19	GNA11 (ENSPPYG00000009366) #20	ENSPPYG00000009364 #21	TLE2 (ENSPPYG00000009363) #22	TLE6 (ENSPPYG00000009362) ##22	ZNF77 (ENSPPYG00000009361) #24	ZNF556 (ENSPPYG00000039854)	ZNF555 (ENSPPYG00000009360)	ENSPPYG00000012138	ENSPPYG00000012058	ZNF554 (ENSPPYG00000039445)	THOP1 (ENSPPYG00000009359)	SGTA (ENSPPYG00000009358)	SLC39A3 (ENSPPYG00000009357)	DIRAS1 (ENSPPYG00000010579)	GNG7 (ENSPPYG00000030353)	ENSPPYG00000009354	LMNB2 (ENSPPYG00000009353)	TIMM13 (ENSPPYG00000009352)
Gibbon	MODERN SPECIES	7	TBXA2R (ENSNLEG00000002715) #7	GIPC3 (ENSNLEG00000002712) #8	ENSNLEG00000002687 #10	ENSNLEG00000033946 #11	FZR1 (ENSNLEG00000002571) #12	ENSNLEG00000029120	ENSNLEG00000030890 #13	SMIM44 (ENSNLEG00000029122)	ENSNLEG00000034914 #14	ENSNLEG00000002563 #15	ENSNLEG00000002553	NCLN (ENSNLEG00000002535) #17	GNA15 (ENSNLEG00000028276) #19	ENSNLEG00000002517 #20	ENSNLEG00000032291 #21	ENSNLEG00000002512 #22	TLE6 (ENSNLEG00000002466) ##22	ZNF77 (ENSNLEG00000002461) #24	ENSNLEG00000035301	ZNF556 (ENSNLEG00000002456)	ZNF555 (ENSNLEG00000002452)	ZNF554 (ENSNLEG00000027068)	THOP1 (ENSNLEG00000002434)	SGTA (ENSNLEG00000002311)	SLC39A3 (ENSNLEG00000029054)	DIRAS1 (ENSNLEG00000019022)	GNG7 (ENSNLEG00000033380)	LMNB2 (ENSNLEG00000002277)	ENSNLEG00000028772	ENSNLEG00000002273	LSM7 (ENSNLEG00000002265)
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Rhinopithecus	ANCESTRAL SPECIES	5	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231
Golden snub-nosed monkey	MODERN SPECIES	1318	GIPC3 (ENSRROG00000031972) #8	ENSRROG00000044154	HMG20B (ENSRROG00000012256) #9	MFSD12 (ENSRROG00000038465) #10	TEKTIP1 (ENSRROG00000042406) #11	FZR1 (ENSRROG00000036142) #12	DOHH (ENSRROG00000043930) #13	SMIM44 (ENSRROG00000030107)	SMIM24 (ENSRROG00000032951) #14	NFIC (ENSRROG00000044677) #15	CELF5 (ENSRROG00000032625) #16	NCLN (ENSRROG00000028611) #17	GNA15 (ENSRROG00000035571) #19	GNA11 (ENSRROG00000032415) #20	TLE5 (ENSRROG00000038789) #21	TLE2 (ENSRROG00000033121) #22	TLE6 (ENSRROG00000018085) ##22	ZNF77 (ENSRROG00000028828) #24	ZNF57 (ENSRROG00000030059)	ZNF556 (ENSRROG00000007558)	ZNF555 (ENSRROG00000043176)	ZNF554 (ENSRROG00000039041)	THOP1 (ENSRROG00000031016)	SGTA (ENSRROG00000018224)	SLC39A3 (ENSRROG00000028677)
Black snub-nosed monkey	MODERN SPECIES	1375	TBXA2R (ENSRBIG00000036411) #7	GIPC3 (ENSRBIG00000038552) #8	HMG20B (ENSRBIG00000041734) #9	MFSD12 (ENSRBIG00000017416) #10	TEKTIP1 (ENSRBIG00000028614) #11	FZR1 (ENSRBIG00000040539) #12	DOHH (ENSRBIG00000039236) #13	SMIM44 (ENSRBIG00000033666)	SMIM24 (ENSRBIG00000033962) #14	NFIC (ENSRBIG00000040502) #15	ENSRBIG00000038502	NCLN (ENSRBIG00000040050) #17	GNA15 (ENSRBIG00000036769) #19	GNA11 (ENSRBIG00000020274) #20	TLE5 (ENSRBIG00000001610) #21	TLE2 (ENSRBIG00000028459) #22	TLE6 (ENSRBIG00000039750) ##22	ZNF77 (ENSRBIG00000029867) #24	ZNF57 (ENSRBIG00000044805)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Vervet Monkey	MODERN SPECIES	25	CACTIN (ENSCSAG00000011116)	TBXA2R (ENSCSAG00000011119) #7	GIPC3 (ENSCSAG00000011131) #8	HMG20B (ENSCSAG00000011140) #9	MFSD12 (ENSCSAG00000011148) #10	TEKTIP1 (ENSCSAG00000011154) #11	FZR1 (ENSCSAG00000011164) #12	DOHH (ENSCSAG00000011169) #13	SMIM24 (ENSCSAG00000011179) #14	NFIC (ENSCSAG00000011182) #15	CELF5 (ENSCSAG00000011210) #16	NCLN (ENSCSAG00000011222) #17	S1PR4 (ENSCSAG00000018815) #18	GNA15 (ENSCSAG00000011230) #19	GNA11 (ENSCSAG00000011235) #20	TLE2 (ENSCSAG00000011330) #22	TLE6 (ENSCSAG00000011416) ##22	ZNF77 (ENSCSAG00000011439) #24	ZNF57 (ENSCSAG00000011445)	ZNF556 (ENSCSAG00000011448)	ZNF555 (ENSCSAG00000011462)	ZNF554 (ENSCSAG00000011470)	ENSCSAG00000011474	THOP1 (ENSCSAG00000011480)	SGTA (ENSCSAG00000011493)	SLC39A3 (ENSCSAG00000011496)	ENSCSAG00000018461	DIRAS1 (ENSCSAG00000018460)	GNG7 (ENSCSAG00000011506)	GADD45B (ENSCSAG00000011516)	LMNB2 (ENSCSAG00000011555)
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Olive baboon	DUPLICATION
Olive baboon	MODERN SPECIES	12	DIRAS1 (ENSPANG00000019430)	SLC39A3 (ENSPANG00000012108)	SGTA (ENSPANG00000006535)	THOP1 (ENSPANG00000018866)	ZNF554 (ENSPANG00000030445)	ZNF555 (ENSPANG00000038361)	ZNF556 (ENSPANG00000010009)	ZNF57 (ENSPANG00000019079)	ZNF77 (ENSPANG00000020667) #24	NCLN (ENSPANG00000009308) #17	S1PR4 (ENSPANG00000020422) #18	GNA15 (ENSPANG00000002676) #19	GNA11 (ENSPANG00000011891) #20	TLE5 (ENSPANG00000016061) #21	ENSPANG00000047059 #22	ENSPANG00000012740 #22	TLE6 (ENSPANG00000014013) ##22	CACTIN (ENSPANG00000019259)	TBXA2R (ENSPANG00000018961) #7	GIPC3 (ENSPANG00000038587) #8	ENSPANG00000010575	TEKTIP1 (ENSPANG00000019078) #11	FZR1 (ENSPANG00000004724) #12	DOHH (ENSPANG00000032446) #13	SMIM44 (ENSPANG00000029842)	NFIC (ENSPANG00000004923) #15	TJP3 (ENSPANG00000013784)	APBA3 (ENSPANG00000003568)	MRPL54 (ENSPANG00000033944)	RAX2 (ENSPANG00000013783)	MATK (ENSPANG00000017163)
Olive baboon	MODERN SPECIES	12	ENSPANG00000046797	DIRAS1 (ENSPANG00000019430)	SLC39A3 (ENSPANG00000012108)	SGTA (ENSPANG00000006535)	THOP1 (ENSPANG00000018866)	ZNF554 (ENSPANG00000030445)	ZNF555 (ENSPANG00000038361)	ZNF556 (ENSPANG00000010009)	ZNF57 (ENSPANG00000019079)	ZNF77 (ENSPANG00000020667) #24	NCLN (ENSPANG00000009308) #17	S1PR4 (ENSPANG00000020422) #18	GNA15 (ENSPANG00000002676) #19	GNA11 (ENSPANG00000011891) #20	TLE5 (ENSPANG00000016061) #21	ENSPANG00000047059 #22	ENSPANG00000012740 #22	TLE6 (ENSPANG00000014013) ##22	CACTIN (ENSPANG00000019259)	TBXA2R (ENSPANG00000018961) #7	GIPC3 (ENSPANG00000038587) #8	ENSPANG00000010575	TEKTIP1 (ENSPANG00000019078) #11	FZR1 (ENSPANG00000004724) #12	DOHH (ENSPANG00000032446) #13	SMIM44 (ENSPANG00000029842)	NFIC (ENSPANG00000004923) #15	TJP3 (ENSPANG00000013784)	APBA3 (ENSPANG00000003568)	MRPL54 (ENSPANG00000033944)	RAX2 (ENSPANG00000013783)
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00910000148188	ENSGT00940000160231	ENSGT00940000159915	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Drill	MODERN SPECIES	1534	ENSMLEG00000035384	MFSD12 (ENSMLEG00000040700) #10	ENSMLEG00000030548	TEKTIP1 (ENSMLEG00000038754) #11	FZR1 (ENSMLEG00000042148) #12	DOHH (ENSMLEG00000037533) #13	SMIM44 (ENSMLEG00000031138)	SMIM24 (ENSMLEG00000030699) #14	NFIC (ENSMLEG00000039794) #15	ENSMLEG00000000058	NCLN (ENSMLEG00000041935) #17	S1PR4 (ENSMLEG00000020497) #18	GNA15 (ENSMLEG00000033896) #19	GNA11 (ENSMLEG00000004955) #20	TLE5 (ENSMLEG00000038877) #21	TLE2 (ENSMLEG00000008863) #22	TLE6 (ENSMLEG00000000586) ##22
Sooty mangabey	MODERN SPECIES	177	GIPC3 (ENSCATG00000041662) #8	HMG20B (ENSCATG00000034700) #9	MFSD12 (ENSCATG00000045111) #10	TEKTIP1 (ENSCATG00000044766) #11	FZR1 (ENSCATG00000044993) #12	DOHH (ENSCATG00000033001) #13	SMIM44 (ENSCATG00000030734)	SMIM24 (ENSCATG00000037417) #14	NFIC (ENSCATG00000037966) #15	ENSCATG00000044494	NCLN (ENSCATG00000044668) #17	S1PR4 (ENSCATG00000017923) #18	GNA15 (ENSCATG00000044954) #19	GNA11 (ENSCATG00000038504) #20	TLE5 (ENSCATG00000040517) #21	TLE2 (ENSCATG00000035147) #22	TLE6 (ENSCATG00000041256) ##22	ZNF77 (ENSCATG00000039733) #24	ZNF556 (ENSCATG00000039430)	ZNF555 (ENSCATG00000041704)	ZNF554 (ENSCATG00000044721)	THOP1 (ENSCATG00000015509)	SGTA (ENSCATG00000033872)	ENSCATG00000006442	SLC39A3 (ENSCATG00000031717)	DIRAS1 (ENSCATG00000018575)	ENSCATG00000036453	GADD45B (ENSCATG00000039400)	LMNB2 (ENSCATG00000033476)	TIMM13 (ENSCATG00000011673)	TMPRSS9 (ENSCATG00000044544)
Macaca	ANCESTRAL SPECIES	24	ENSGT00390000003420.b.a.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993.s.b	ENSGT00940000161621.A.a.b.b.b.a.b.c.a
Pig-tailed macaque	MODERN SPECIES	76	GIPC3 (ENSMNEG00000033247) #8	HMG20B (ENSMNEG00000037721) #9	MFSD12 (ENSMNEG00000036659) #10	TEKTIP1 (ENSMNEG00000031534) #11	FZR1 (ENSMNEG00000028728) #12	DOHH (ENSMNEG00000040585) #13	SMIM44 (ENSMNEG00000032843)	SMIM24 (ENSMNEG00000038502) #14	NFIC (ENSMNEG00000042199) #15	ENSMNEG00000001853	NCLN (ENSMNEG00000036405) #17	S1PR4 (ENSMNEG00000020638) #18	GNA15 (ENSMNEG00000041090) #19	GNA11 (ENSMNEG00000045417) #20	TLE5 (ENSMNEG00000013087) #21	TLE2 (ENSMNEG00000036907) #22	TLE6 (ENSMNEG00000032520) ##22	ZNF77 (ENSMNEG00000039599) #24	ZNF555 (ENSMNEG00000031744)	ZNF554 (ENSMNEG00000035698)	THOP1 (ENSMNEG00000026622)	SGTA (ENSMNEG00000027965)	SLC39A3 (ENSMNEG00000028479)	ENSMNEG00000041965	DIRAS1 (ENSMNEG00000016474)	GNG7 (ENSMNEG00000028385)	GADD45B (ENSMNEG00000038733)	LMNB2 (ENSMNEG00000043540)	TIMM13 (ENSMNEG00000041650)	TMPRSS9 (ENSMNEG00000035963)	SPPL2B (ENSMNEG00000040030)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00390000003420.b.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT01100000263497.E.a.b	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.a.b.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00940000159993.t	ENSGT00940000159993.s.b	ENSGT00940000161621.A.a.b.b.b.a.b.c.a.a
Rhesus	MODERN SPECIES	10	MFSD12 (ENSMMUG00000010653) #10	TEKTIP1 (ENSMMUG00000039983) #11	FZR1 (ENSMMUG00000019870) #12	DOHH (ENSMMUG00000057146) #13	SMIM44 (ENSMMUG00000059495)	SMIM24 (ENSMMUG00000010560) #14	ENSMMUG00000050017	ENSMMUG00000057142	NFIC (ENSMMUG00000003439) #15	ENSMMUG00000060497	CELF5 (ENSMMUG00000015513)	NCLN (ENSMMUG00000017036) #17	GNA15 (ENSMMUG00000047845) #19	GNA11 (ENSMMUG00000002961) #20	ENSMMUG00000050313	TLE2 (ENSMMUG00000002913) #22	TLE6 (ENSMMUG00000002912) ##22	ZNF77 (ENSMMUG00000008458) #24	ZNF556 (ENSMMUG00000048942)	ZNF555 (ENSMMUG00000007485)	ZNF554 (ENSMMUG00000055755)	THOP1 (ENSMMUG00000007268)	SGTA (ENSMMUG00000007265)	DIRAS1 (ENSMMUG00000040263)	GNG7 (ENSMMUG00000065054)	ENSMMUG00000055334	GADD45B (ENSMMUG00000003468)	LMNB2 (ENSMMUG00000001192)	TMPRSS9 (ENSMMUG00000001190)	LSM7 (ENSMMUG00000000452)	LINGO3 (ENSMMUG00000058241)
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000040276	ATCAY (ENSMFAG00000002982)	ZFR2 (ENSMFAG00000031215)	RAX2 (ENSMFAG00000065615)	MATK (ENSMFAG00000030470)	MRPL54 (ENSMFAG00000003311)	APBA3 (ENSMFAG00000044015)	MFSD12 (ENSMFAG00000039649) #10	TEKTIP1 (ENSMFAG00000036699) #11	FZR1 (ENSMFAG00000003458) #12	SMIM24 (ENSMFAG00000037612) #14	NFIC (ENSMFAG00000000744) #15	ENSMFAG00000050957	ENSMFAG00000031277	TLE5 (ENSMFAG00000057458) #21	TLE2 (ENSMFAG00000033930) #22	TLE6 (ENSMFAG00000003537) ##22	ZNF77 (ENSMFAG00000045401) #24	ZNF556 (ENSMFAG00000039163)	ZNF555 (ENSMFAG00000044275)	ZNF554 (ENSMFAG00000045795)	THOP1 (ENSMFAG00000036742)	SGTA (ENSMFAG00000034409)	ENSMFAG00000058005	ENSMFAG00000065748	GADD45B (ENSMFAG00000042254)	LMNB2 (ENSMFAG00000044219)	ENSMFAG00000038356	ENSMFAG00000061899	SPPL2B (ENSMFAG00000039923)	LSM7 (ENSMFAG00000044572)
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00940000161213.u.b #9	ENSGT00940000161213.u.a #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000161213.u.b #9	ENSGT00940000161213.u.a #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Marmoset	MODERN SPECIES	14	CACTIN (ENSCJAG00000014929)	TBXA2R (ENSCJAG00000014921) #7	GIPC3 (ENSCJAG00000014904) #8	ENSCJAG00000003488 #9	MFSD12 (ENSCJAG00000014897) #10	TEKTIP1 (ENSCJAG00000014896) #11	FZR1 (ENSCJAG00000014877) #12	DOHH (ENSCJAG00000014871) #13	SMIM44 (ENSCJAG00000039325)	SMIM24 (ENSCJAG00000069968) #14	ENSCJAG00000080745	CELF5 (ENSCJAG00000039430) #16	GNA15 (ENSCJAG00000040313) #19	GNA11 (ENSCJAG00000016160) #20	ENSCJAG00000016149 #21	TLE2 (ENSCJAG00000018666) #22	TLE6 (ENSCJAG00000018653) ##22	ENSCJAG00000073229	ZNF77 (ENSCJAG00000003471) #24	ZNF555 (ENSCJAG00000067047)	ZNF554 (ENSCJAG00000068037)	THOP1 (ENSCJAG00000084222)	SGTA (ENSCJAG00000003539)	SLC39A3 (ENSCJAG00000057869)	DIRAS1 (ENSCJAG00000023307)	GNG7 (ENSCJAG00000071869)	GADD45B (ENSCJAG00000013616)	ENSCJAG00000087139	LMNB2 (ENSCJAG00000013578)	TIMM13 (ENSCJAG00000013577)	TMPRSS9 (ENSCJAG00000013546)
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00390000003420.b #8	ENSGT00940000161213.u.a #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Capuchin	MODERN SPECIES	375	HMG20B (ENSCCAG00000020130) #9	MFSD12 (ENSCCAG00000021716) #10	C19orf71 (ENSCCAG00000028895) #11	FZR1 (ENSCCAG00000031294) #12	ENSCCAG00000025603	DOHH (ENSCCAG00000018512) #13	SMIM44 (ENSCCAG00000024174)	SMIM24 (ENSCCAG00000032618) #14	NFIC (ENSCCAG00000035238) #15	ENSCCAG00000028950 #16	NCLN (ENSCCAG00000034927) #17	S1PR4 (ENSCCAG00000019353) #18	GNA15 (ENSCCAG00000028488) #19	GNA11 (ENSCCAG00000022709) #20	TLE5 (ENSCCAG00000037181) #21	TLE2 (ENSCCAG00000031140) #22	TLE6 (ENSCCAG00000035104) ##22	ZNF77 (ENSCCAG00000017871) #24	ZNF57 (ENSCCAG00000026905)	ZNF556 (ENSCCAG00000003367)	ZNF554 (ENSCCAG00000031592)	THOP1 (ENSCCAG00000011844)	SGTA (ENSCCAG00000023345)	SLC39A3 (ENSCCAG00000022362)	DIRAS1 (ENSCCAG00000015194)	GNG7 (ENSCCAG00000033335)	GADD45B (ENSCCAG00000023859)	LMNB2 (ENSCCAG00000000201)	TIMM13 (ENSCCAG00000029801)	TMPRSS9 (ENSCCAG00000025141)	SPPL2B (ENSCCAG00000026669)
Bolivian squirrel monkey	MODERN SPECIES	150	GIPC3 (ENSSBOG00000021391) #8	HMG20B (ENSSBOG00000034086) #9	MFSD12 (ENSSBOG00000022502) #10	TEKTIP1 (ENSSBOG00000020851) #11	FZR1 (ENSSBOG00000023681) #12	DOHH (ENSSBOG00000021498) #13	SMIM44 (ENSSBOG00000025422)	SMIM24 (ENSSBOG00000019949) #14	NFIC (ENSSBOG00000031869) #15	ENSSBOG00000036241 #16	NCLN (ENSSBOG00000027521) #17	GNA15 (ENSSBOG00000031168) #19	GNA11 (ENSSBOG00000017439) #20	ENSSBOG00000011100	TLE5 (ENSSBOG00000022171) #21	TLE2 (ENSSBOG00000029407) #22	TLE6 (ENSSBOG00000034568) ##22	ZNF77 (ENSSBOG00000022293) #24	ENSSBOG00000018429	ZNF555 (ENSSBOG00000013346)	ZNF554 (ENSSBOG00000031736)	THOP1 (ENSSBOG00000035328)	SGTA (ENSSBOG00000032411)	ENSSBOG00000021127	SLC39A3 (ENSSBOG00000019952)	DIRAS1 (ENSSBOG00000032130)
Mas night monkey	MODERN SPECIES	937	CACTIN (ENSANAG00000034680)	TBXA2R (ENSANAG00000009361) #7	HMG20B (ENSANAG00000020667) #9	MFSD12 (ENSANAG00000037281) #10	TEKTIP1 (ENSANAG00000033612) #11	FZR1 (ENSANAG00000028463) #12	DOHH (ENSANAG00000036531) #13	SMIM44 (ENSANAG00000014595)	ENSANAG00000027655	NFIC (ENSANAG00000036415) #15	CELF5 (ENSANAG00000024549) #16	NCLN (ENSANAG00000036906) #17	S1PR4 (ENSANAG00000010374) #18	GNA15 (ENSANAG00000029456) #19	GNA11 (ENSANAG00000033019) #20	TLE2 (ENSANAG00000028611) #22	TLE6 (ENSANAG00000025865) ##22	ZNF77 (ENSANAG00000012552) #24	ZNF57 (ENSANAG00000034416)	ZNF554 (ENSANAG00000033835)	THOP1 (ENSANAG00000033301)	ENSANAG00000029667	SLC39A3 (ENSANAG00000036219)	DIRAS1 (ENSANAG00000010669)	ENSANAG00000029903	GNG7 (ENSANAG00000027430)	GADD45B (ENSANAG00000033393)	LMNB2 (ENSANAG00000029909)	TIMM13 (ENSANAG00000024807)	TMPRSS9 (ENSANAG00000036281)	SPPL2B (ENSANAG00000035668)
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a.g #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000163572	ENSGT00940000160775
Coquerels sifaka	MODERN SPECIES	348	SLC39A3 (ENSPCOG00000019953)	SGTA (ENSPCOG00000022419)	THOP1 (ENSPCOG00000025936)	ZNF554 (ENSPCOG00000002531)	ZNF555 (ENSPCOG00000022329)	ENSPCOG00000020343	ZNF57 (ENSPCOG00000018829)	ZNF77 (ENSPCOG00000024746) #24	SMIM44 (ENSPCOG00000024749)	NFIC (ENSPCOG00000027301) #15	CELF5 (ENSPCOG00000011528) #16	NCLN (ENSPCOG00000024560) #17	GNA15 (ENSPCOG00000013834) #19	GNA11 (ENSPCOG00000024506) #20	ENSPCOG00000017438 #21	TLE2 (ENSPCOG00000028201) #22	TLE6 (ENSPCOG00000027942) ##22	DOHH (ENSPCOG00000002793) #13	FZR1 (ENSPCOG00000020160) #12	TEKTIP1 (ENSPCOG00000017742) #11	MFSD12 (ENSPCOG00000023032) #10	HMG20B (ENSPCOG00000013810) #9	GIPC3 (ENSPCOG00000000061) #8	TBXA2R (ENSPCOG00000015698) #7	CACTIN (ENSPCOG00000015989)	PIP5K1C (ENSPCOG00000021588)	TJP3 (ENSPCOG00000020238)	APBA3 (ENSPCOG00000026721)	MRPL54 (ENSPCOG00000027550)	RAX2 (ENSPCOG00000022891)	MATK (ENSPCOG00000018010)
Greater bamboo lemur	MODERN SPECIES	145														GNA11 (ENSPSMG00000022261) #20	TLE5 (ENSPSMG00000022268) #21	TLE2 (ENSPSMG00000022356) #22	ENSPSMG00000022406 ##22
Mouse lemur	MODERN SPECIES	16	TBXA2R (ENSMICG00000031426) #7	GIPC3 (ENSMICG00000012665) #8	HMG20B (ENSMICG00000028142) #9	MFSD12 (ENSMICG00000026672) #10	TEKTIP1 (ENSMICG00000043061) #11	FZR1 (ENSMICG00000015945) #12	DOHH (ENSMICG00000044244) #13	SMIM44 (ENSMICG00000044026)	SMIM24 (ENSMICG00000043267) #14	NFIC (ENSMICG00000006236) #15	CELF5 (ENSMICG00000003506) #16	NCLN (ENSMICG00000007457) #17	GNA15 (ENSMICG00000002977) #19	GNA11 (ENSMICG00000032000) #20	ENSMICG00000027776 #21	TLE2 (ENSMICG00000003029) #22	TLE6 (ENSMICG00000003016) ##22	ZNF77 (ENSMICG00000044639) #24	ZNF556 (ENSMICG00000043985)	ZNF555 (ENSMICG00000001516)	ZNF554 (ENSMICG00000030632)	THOP1 (ENSMICG00000031728)	SGTA (ENSMICG00000013433)	SLC39A3 (ENSMICG00000031825)	DIRAS1 (ENSMICG00000013418)	GNG7 (ENSMICG00000045234)	GADD45B (ENSMICG00000031371)	LMNB2 (ENSMICG00000010043)	TIMM13 (ENSMICG00000026616)	TMPRSS9 (ENSMICG00000010010)	SPPL2B (ENSMICG00000009993)
Bushbaby	MODERN SPECIES	144	CACTIN (ENSOGAG00000010382)	TBXA2R (ENSOGAG00000026948) #7	GIPC3 (ENSOGAG00000014175) #8	HMG20B (ENSOGAG00000014171) #9	MFSD12 (ENSOGAG00000014168) #10	FZR1 (ENSOGAG00000014162) #12	DOHH (ENSOGAG00000006502) #13	SMIM24 (ENSOGAG00000027356) #14	NFIC (ENSOGAG00000026321) #15	CELF5 (ENSOGAG00000014161) #16	NCLN (ENSOGAG00000009302) #17	S1PR4 (ENSOGAG00000032004) #18	GNA15 (ENSOGAG00000026139) #19	GNA11 (ENSOGAG00000016154) #20	TLE5 (ENSOGAG00000016151) #21	TLE2 (ENSOGAG00000016146) #22	ENSOGAG00000032033 ##22	ENSOGAG00000002111	ZNF555 (ENSOGAG00000000383)	THOP1 (ENSOGAG00000000375)	SGTA (ENSOGAG00000000374)	SLC39A3 (ENSOGAG00000025858)	DIRAS1 (ENSOGAG00000000372)	GNG7 (ENSOGAG00000027288)	GADD45B (ENSOGAG00000000367)	LMNB2 (ENSOGAG00000000365)	TIMM13 (ENSOGAG00000013643)	TMPRSS9 (ENSOGAG00000013627)	SPPL2B (ENSOGAG00000000145)	ENSOGAG00000000144	LINGO3 (ENSOGAG00000027300)
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.b #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000011698.c.a.c.b	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.b #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Suina	ANCESTRAL SPECIES	16	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01070000257262	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Chacoan peccary	MODERN SPECIES	770	GIPC3 (ENSCWAG00000010858) #8	HMG20B (ENSCWAG00000010811) #9	MFSD12 (ENSCWAG00000010718) #10	TEKTIP1 (ENSCWAG00000010670) #11	FZR1 (ENSCWAG00000010574) #12	DOHH (ENSCWAG00000010524) #13	SMIM44 (ENSCWAG00000010490)	SMIM24 (ENSCWAG00000010463) #14	NFIC (ENSCWAG00000010134) #15	CELF5 (ENSCWAG00000009942) #16	NCLN (ENSCWAG00000009813) #17	S1PR4 (ENSCWAG00000009788) #18	GNA15 (ENSCWAG00000009750) #19	GNA11 (ENSCWAG00000009699) #20	TLE5 (ENSCWAG00000009613) #21	TLE2 (ENSCWAG00000008524) #22	ENSCWAG00000008333 ##22	ENSCWAG00000008275	ZNF555 (ENSCWAG00000008231)	ENSCWAG00000008154	THOP1 (ENSCWAG00000008013)	SGTA (ENSCWAG00000007961)	SLC39A3 (ENSCWAG00000007922)	DIRAS1 (ENSCWAG00000007888)	GNG7 (ENSCWAG00000019144)	GADD45B (ENSCWAG00000019115)	LMNB2 (ENSCWAG00000019057)	TIMM13 (ENSCWAG00000019016)	TMPRSS9 (ENSCWAG00000018773)	SPPL2B (ENSCWAG00000018685)	LSM7 (ENSCWAG00000018611)
Pig	MODERN SPECIES	10	GIPC3 (ENSSSCG00000054746) #8	HMG20B (ENSSSCG00000040421) #9	MFSD12 (ENSSSCG00000026169) #10	TEKTIP1 (ENSSSCG00000056892) #11	FZR1 (ENSSSCG00000013481) #12	DOHH (ENSSSCG00000013478) #13	SMIM44 (ENSSSCG00000049629)	ENSSSCG00000038067 #14	NFIC (ENSSSCG00000036537) #15	CELF5 (ENSSSCG00000013476) #16	NCLN (ENSSSCG00000013475) #17	S1PR4 (ENSSSCG00000013474) #18	GNA15 (ENSSSCG00000013473) #19	GNA11 (ENSSSCG00000029279) #20	TLE5 (ENSSSCG00000032265) #21	TLE2 (ENSSSCG00000028995) #22	ENSSSCG00000024588 ##22	ENSSSCG00000053447	ENSSSCG00000036792	ENSSSCG00000034545 #24	ENSSSCG00000013471 #24	ENSSSCG00000039774	ZNF555 (ENSSSCG00000013469)	ZNF554 (ENSSSCG00000038635)	THOP1 (ENSSSCG00000013468)	SGTA (ENSSSCG00000013467)	DIRAS1 (ENSSSCG00000038013)	GNG7 (ENSSSCG00000033949)	GADD45B (ENSSSCG00000022689)	LMNB2 (ENSSSCG00000026784)	TIMM13 (ENSSSCG00000022757)
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000011698.c.a.c.b	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Cetacea	ANCESTRAL SPECIES	1	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a
Odontoceti_a	DUPLICATION
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282.d #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282.d #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282.d #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053	ENSGT00940000153487.b.a
Narwhal	MODERN SPECIES	298	ENSMMNG00015000865	GIPC3 (ENSMMNG00015000888) #8	HMG20B (ENSMMNG00015000925) #9	MFSD12 (ENSMMNG00015000990) #10	TEKTIP1 (ENSMMNG00015001041) #11	FZR1 (ENSMMNG00015001082) #12	DOHH (ENSMMNG00015001138) #13	SMIM24 (ENSMMNG00015001179) #14	NFIC (ENSMMNG00015001309) #15	CELF5 (ENSMMNG00015001491) #16	NCLN (ENSMMNG00015001627) #17	S1PR4 (ENSMMNG00015001684) #18	GNA15 (ENSMMNG00015001704) #19	GNA11 (ENSMMNG00015001728) #20	TLE5 (ENSMMNG00015001757) #21	TLE2 (ENSMMNG00015001829) #22	ENSMMNG00015001925 ##22	ENSMMNG00015001966	ENSMMNG00015001988 #24	ENSMMNG00015002004 #24	ZNF555 (ENSMMNG00015002028)	RAX2 (ENSMMNG00015002052)	MATK (ENSMMNG00015002087)	ZFR2 (ENSMMNG00015002202)	ATCAY (ENSMMNG00015002321)	ENSMMNG00015002371	DAPK3 (ENSMMNG00015002394)	EEF2 (ENSMMNG00015002426)	PIAS4 (ENSMMNG00015002478)	ZBTB7A (ENSMMNG00015002508)	MAP2K2 (ENSMMNG00015002569)
Beluga whale	MODERN SPECIES	62	HMG20B (ENSDLEG00000015376) #9	MFSD12 (ENSDLEG00000015360) #10	ENSDLEG00000015356 #11	FZR1 (ENSDLEG00000020434) #12	DOHH (ENSDLEG00000020431) #13	ENSDLEG00000020426 #14	NFIC (ENSDLEG00000020401) #15	ENSDLEG00000020396 #16	ENSDLEG00000020390	NCLN (ENSDLEG00000020375) #17	S1PR4 (ENSDLEG00000020368) #18	GNA15 (ENSDLEG00000020362) #19	GNA11 (ENSDLEG00000020358) #20	AES (ENSDLEG00000020354) #21	ENSDLEG00000020351 #22	ENSDLEG00000020344 #22	ENSDLEG00000020339 ##22	ENSDLEG00000020335 #24	ENSDLEG00000020333 #24	ENSDLEG00000020329 #24	ZNF555 (ENSDLEG00000020325)	RAX2 (ENSDLEG00000020322)	MATK (ENSDLEG00000020319)	ZFR2 (ENSDLEG00000020297)	ATCAY (ENSDLEG00000020274)	NMRK2 (ENSDLEG00000020268)	DAPK3 (ENSDLEG00000020266)	EEF2 (ENSDLEG00000020260)	PIAS4 (ENSDLEG00000020241)	ZBTB7A (ENSDLEG00000020233)	MAP2K2 (ENSDLEG00000020230)
Vaquita	MODERN SPECIES	14	ENSPSNG00000009640	GIPC3 (ENSPSNG00000009792) #8	HMG20B (ENSPSNG00000009908) #9	MFSD12 (ENSPSNG00000009980) #10	TEKTIP1 (ENSPSNG00000010156) #11	FZR1 (ENSPSNG00000010251) #12	DOHH (ENSPSNG00000010352) #13	NFIC (ENSPSNG00000010514) #15	SMIM24 (ENSPSNG00000010742) #14	CELF5 (ENSPSNG00000010809) #16	NCLN (ENSPSNG00000011058) #17	S1PR4 (ENSPSNG00000011138) #18	GNA15 (ENSPSNG00000011159) #19	GNA11 (ENSPSNG00000011201) #20	TLE5 (ENSPSNG00000011246) #21	TLE2 (ENSPSNG00000011350) #22	TLE6 (ENSPSNG00000011672) ##22	ENSPSNG00000011693	ENSPSNG00000011716 #24	ENSPSNG00000011739 #24	ENSPSNG00000011752 #24	ZNF555 (ENSPSNG00000011767)	RAX2 (ENSPSNG00000011818)	MATK (ENSPSNG00000011874)	ZFR2 (ENSPSNG00000012279)	ATCAY (ENSPSNG00000012627)	ENSPSNG00000012851	DAPK3 (ENSPSNG00000012917)	EEF2 (ENSPSNG00000012974)	PIAS4 (ENSPSNG00000013054)	ZBTB7A (ENSPSNG00000013107)
Dolphin	MODERN SPECIES	3250																ENSTTRG00000007337 #22	ENSTTRG00000007334 ##22
Odontoceti_a	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.n #22
Odontoceti_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.n #22
Monodontidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.n #22
Beluga whale	MODERN SPECIES	62	GIPC3 (ENSDLEG00000015384) #8	HMG20B (ENSDLEG00000015376) #9	MFSD12 (ENSDLEG00000015360) #10	ENSDLEG00000015356 #11	FZR1 (ENSDLEG00000020434) #12	DOHH (ENSDLEG00000020431) #13	ENSDLEG00000020426 #14	NFIC (ENSDLEG00000020401) #15	ENSDLEG00000020396 #16	ENSDLEG00000020390	NCLN (ENSDLEG00000020375) #17	S1PR4 (ENSDLEG00000020368) #18	GNA15 (ENSDLEG00000020362) #19	GNA11 (ENSDLEG00000020358) #20	AES (ENSDLEG00000020354) #21	ENSDLEG00000020351 #22	ENSDLEG00000020344 #22	ENSDLEG00000020339 ##22	ENSDLEG00000020335 #24	ENSDLEG00000020333 #24	ENSDLEG00000020329 #24	ZNF555 (ENSDLEG00000020325)	RAX2 (ENSDLEG00000020322)	MATK (ENSDLEG00000020319)	ZFR2 (ENSDLEG00000020297)	ATCAY (ENSDLEG00000020274)	NMRK2 (ENSDLEG00000020268)	DAPK3 (ENSDLEG00000020266)	EEF2 (ENSDLEG00000020260)	PIAS4 (ENSDLEG00000020241)	ZBTB7A (ENSDLEG00000020233)
Sperm whale	MODERN SPECIES	11	NMRK2 (ENSPCTG00005016732)	ATCAY (ENSPCTG00005016906)	ENSPCTG00005016973	ENSPCTG00005017007	MATK (ENSPCTG00005017055)	RAX2 (ENSPCTG00005017465)	ENSPCTG00005017499	ZNF555 (ENSPCTG00005017508)	ENSPCTG00005017562 #24	ENSPCTG00005017573 #24	NFIC (ENSPCTG00005017610) #15	SMIM24 (ENSPCTG00005017813) #14	DOHH (ENSPCTG00005017916) #13	ENSPCTG00005017955	TLE5 (ENSPCTG00005018020) #21	TLE2 (ENSPCTG00005018210) #22	PIP5K1C (ENSPCTG00005019009)	ENSPCTG00005019154	ENSPCTG00005019177	APBA3 (ENSPCTG00005019206)	MRPL54 (ENSPCTG00005019236)	MBD3 (ENSPCTG00005019289)	ENSPCTG00005019396	TCF3 (ENSPCTG00005019427)	ONECUT3 (ENSPCTG00005019483)	KLF16 (ENSPCTG00005019503)	ABHD17A (ENSPCTG00005019527)	ADAT3 (ENSPCTG00005019576)	ENSPCTG00005019585	MOB3A (ENSPCTG00005019638)	BTBD2 (ENSPCTG00005019674)
Blue whale	MODERN SPECIES	14	CACTIN (ENSBMSG00010008209)	TBXA2R (ENSBMSG00010008203) #7	GIPC3 (ENSBMSG00010008191) #8	HMG20B (ENSBMSG00010008175) #9	MFSD12 (ENSBMSG00010008150) #10	FZR1 (ENSBMSG00010008072) #12	DOHH (ENSBMSG00010008048) #13	ENSBMSG00010007983 #14	NFIC (ENSBMSG00010007764) #15	CELF5 (ENSBMSG00010007695) #16	NCLN (ENSBMSG00010007666) #17	S1PR4 (ENSBMSG00010007650) #18	GNA15 (ENSBMSG00010007638) #19	GNA11 (ENSBMSG00010007614) #20	TLE5 (ENSBMSG00010007577) #21	TLE2 (ENSBMSG00010007244) #22	ENSBMSG00010007176 ##22	ENSBMSG00010007156	ENSBMSG00010007140 #24	ENSBMSG00010007121 #24	ENSBMSG00010007090	ENSBMSG00010007074 #24	ZNF555 (ENSBMSG00010007047)	ZFR2 (ENSBMSG00010006830)	ATCAY (ENSBMSG00010006778)	ENSBMSG00010006760	EEF2 (ENSBMSG00010006690)	PIAS4 (ENSBMSG00010004230)	MAP2K2 (ENSBMSG00010004206)	CREB3L3 (ENSBMSG00010004181)	SIRT6 (ENSBMSG00010004161) #25
Pecora	ANCESTRAL SPECIES		ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Percora_a	ANCESTRAL SPECIES		ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Siberian musk deer	MODERN SPECIES	99	HMG20B (ENSMMSG00000000025) #9	MFSD12 (ENSMMSG00000000043) #10	TEKTIP1 (ENSMMSG00000000060) #11	FZR1 (ENSMMSG00000000085) #12	DOHH (ENSMMSG00000000141) #13	ENSMMSG00000000156	SMIM44 (ENSMMSG00000000172)	ENSMMSG00000000182	NFIC (ENSMMSG00000000253) #15	CELF5 (ENSMMSG00000000449) #16	NCLN (ENSMMSG00000000514) #17	S1PR4 (ENSMMSG00000000524) #18	GNA15 (ENSMMSG00000000532) #19	GNA11 (ENSMMSG00000000551) #20	TLE5 (ENSMMSG00000000569) #21	TLE2 (ENSMMSG00000000627) #22	ENSMMSG00000000868 ##22	ENSMMSG00000000894 #24	ENSMMSG00000000907 #24	ZNF555 (ENSMMSG00000000926)	ZNF554 (ENSMMSG00000000944)	THOP1 (ENSMMSG00000000968)	SGTA (ENSMMSG00000001020)	SLC39A3 (ENSMMSG00000001047)	DIRAS1 (ENSMMSG00000001071)	GNG7 (ENSMMSG00000001082)	GADD45B (ENSMMSG00000001115)	LMNB2 (ENSMMSG00000001143)	TIMM13 (ENSMMSG00000001175)	TMPRSS9 (ENSMMSG00000001228)	SPPL2B (ENSMMSG00000001402)
Bovidae	ANCESTRAL SPECIES		ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Caprinae	ANCESTRAL SPECIES	3	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Rambouillet Sheep	MODERN SPECIES	21	TBXA2R (ENSOARG00020018783) #7	GIPC3 (ENSOARG00020018810) #8	HMG20B (ENSOARG00020018879) #9	MFSD12 (ENSOARG00020018933) #10	TEKTIP1 (ENSOARG00020019053) #11	FZR1 (ENSOARG00020019125) #12	DOHH (ENSOARG00020019251) #13	SMIM24 (ENSOARG00020019336) #14	NFIC (ENSOARG00020019406) #15	CELF5 (ENSOARG00020019796) #16	NCLN (ENSOARG00020019971) #17	S1PR4 (ENSOARG00020020029) #18	GNA15 (ENSOARG00020020045) #19	GNA11 (ENSOARG00020020092) #20	TLE5 (ENSOARG00020020135) #21	TLE2 (ENSOARG00020020198) #22	ENSOARG00020021289 ##22	ENSOARG00020021357	ZNF555 (ENSOARG00020021394)	ZNF554 (ENSOARG00020021423)	THOP1 (ENSOARG00020021465)	SGTA (ENSOARG00020021585)	SLC39A3 (ENSOARG00020021617)	DIRAS1 (ENSOARG00020021668)	GNG7 (ENSOARG00020021685)	GADD45B (ENSOARG00020021717)	LMNB2 (ENSOARG00020021756)	TIMM13 (ENSOARG00020021880)	TMPRSS9 (ENSOARG00020021920)	SPPL2B (ENSOARG00020022087)	LSM7 (ENSOARG00020022153)
Goat	MODERN SPECIES	26	TBXA2R (ENSCHIG00000012747) #7	GIPC3 (ENSCHIG00000018804) #8	HMG20B (ENSCHIG00000023604) #9	TEKTIP1 (ENSCHIG00000012701) #11	MFSD12 (ENSCHIG00000024505) #10	FZR1 (ENSCHIG00000014824) #12	DOHH (ENSCHIG00000023284) #13	SMIM24 (ENSCHIG00000016053) #14	NFIC (ENSCHIG00000015364) #15	CELF5 (ENSCHIG00000004008) #16	NCLN (ENSCHIG00000021992) #17	S1PR4 (ENSCHIG00000012284) #18	GNA15 (ENSCHIG00000006621) #19	GNA11 (ENSCHIG00000012068) #20	TLE5 (ENSCHIG00000012967) #21	TLE2 (ENSCHIG00000026991) #22	TLE6 (ENSCHIG00000018660) ##22	ENSCHIG00000011999 #24	ENSCHIG00000013771 #24	ZNF555 (ENSCHIG00000013462)	ZNF554 (ENSCHIG00000021466)	THOP1 (ENSCHIG00000013949)	SGTA (ENSCHIG00000025763)	SLC39A3 (ENSCHIG00000019215)	DIRAS1 (ENSCHIG00000004255)	GNG7 (ENSCHIG00000025311)	GADD45B (ENSCHIG00000011819)	LMNB2 (ENSCHIG00000013360)	TIMM13 (ENSCHIG00000003337)	TMPRSS9 (ENSCHIG00000017597)	SPPL2B (ENSCHIG00000018686)
Bovinae	ANCESTRAL SPECIES	2	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00960000187413	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
American bison	MODERN SPECIES	3349	HMG20B (ENSBBBG00000023190) #9	MFSD12 (ENSBBBG00000023220) #10	TEKTIP1 (ENSBBBG00000023231) #11	FZR1 (ENSBBBG00000023304) #12	ENSBBBG00000023317	DOHH (ENSBBBG00000008411) #13	SMIM44 (ENSBBBG00000023332)	SMIM24 (ENSBBBG00000023341) #14	NFIC (ENSBBBG00000023432) #15	ENSBBBG00000008686	NCLN (ENSBBBG00000023582) #17	S1PR4 (ENSBBBG00000023601) #18	GNA15 (ENSBBBG00000006167) #19	GNA11 (ENSBBBG00000006176) #20	TLE5 (ENSBBBG00000023655) #21	TLE2 (ENSBBBG00000023745) #22	ENSBBBG00000023769 ##22	ZNF555 (ENSBBBG00000023789)	ZNF554 (ENSBBBG00000023794)	THOP1 (ENSBBBG00000023819)	SGTA (ENSBBBG00000023876)	SLC39A3 (ENSBBBG00000000305)	DIRAS1 (ENSBBBG00000023894)	GNG7 (ENSBBBG00000023928)	GADD45B (ENSBBBG00000023938)	LMNB2 (ENSBBBG00000023963)	TIMM13 (ENSBBBG00000023974)	TMPRSS9 (ENSBBBG00000008875)	SPPL2B (ENSBBBG00000008884)	LSM7 (ENSBBBG00000024293)	LINGO3 (ENSBBBG00000024314)
Bos	ANCESTRAL SPECIES	3	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00960000187413	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Bos_b	ANCESTRAL SPECIES	2	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00960000187413	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT01100000263712.a.b.a.a	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Hybrid Bos Indicus	MODERN SPECIES	26	GIPC3 (ENSBIXG00005002213) #8	HMG20B (ENSBIXG00005015091) #9	MFSD12 (ENSBIXG00005015129) #10	TEKTIP1 (ENSBIXG00005015154) #11	FZR1 (ENSBIXG00005006231) #12	ENSBIXG00005015258	DOHH (ENSBIXG00005015281) #13	SMIM24 (ENSBIXG00005015291) #14	ENSBIXG00005015296	NFIC (ENSBIXG00005002308) #15	NCLN (ENSBIXG00005002433) #17	S1PR4 (ENSBIXG00005015709) #18	GNA15 (ENSBIXG00005002453) #19	GNA11 (ENSBIXG00005002462) #20	TLE5 (ENSBIXG00005015803) #21	TLE2 (ENSBIXG00005015910) #22	TLE6 (ENSBIXG00005002519) ##22	ENSBIXG00005015961 #24	ENSBIXG00005015965 #24	ZNF555 (ENSBIXG00005015972)	ZNF554 (ENSBIXG00005002533)	THOP1 (ENSBIXG00005016046)	SGTA (ENSBIXG00005016070)	ENSBIXG00005002558	SLC39A3 (ENSBIXG00005016121)	DIRAS1 (ENSBIXG00005016138)	GNG7 (ENSBIXG00005016154)	GADD45B (ENSBIXG00005002579)	LMNB2 (ENSBIXG00005016199)	TIMM13 (ENSBIXG00005016236)	TMPRSS9 (ENSBIXG00005016265)
Cow	MODERN SPECIES	26	FZR1 (ENSBTAG00000031387) #12	ENSBTAG00000051400	DOHH (ENSBTAG00000005272) #13	SMIM24 (ENSBTAG00000031383) #14	ENSBTAG00000054259	NFIC (ENSBTAG00000008520) #15	ENSBTAG00000049701	ENSBTAG00000051439 #16	ENSBTAG00000054212	CELF5 (ENSBTAG00000021774) #16	NCLN (ENSBTAG00000020759) #17	S1PR4 (ENSBTAG00000000381) #18	GNA15 (ENSBTAG00000019988) #19	GNA11 (ENSBTAG00000012181) #20	TLE5 (ENSBTAG00000031363) #21	TLE2 (ENSBTAG00000001153) #22	TLE6 (ENSBTAG00000001152) ##22	ENSBTAG00000012868 #24	ZNF555 (ENSBTAG00000008397)	ZNF554 (ENSBTAG00000031352)	THOP1 (ENSBTAG00000020446)	SGTA (ENSBTAG00000015090)	ENSBTAG00000048696	SLC39A3 (ENSBTAG00000017706)	DIRAS1 (ENSBTAG00000045981)	GNG7 (ENSBTAG00000007644)	GADD45B (ENSBTAG00000025462)	LMNB2 (ENSBTAG00000013624)	TIMM13 (ENSBTAG00000013623)	TMPRSS9 (ENSBTAG00000000718)	SPPL2B (ENSBTAG00000004524)
Bos_a	ANCESTRAL SPECIES	2	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Domestic yak	MODERN SPECIES	27	GIPC3 (ENSBGRG00000021004) #8	HMG20B (ENSBGRG00000021064) #9	MFSD12 (ENSBGRG00000021107) #10	TEKTIP1 (ENSBGRG00000021216) #11	FZR1 (ENSBGRG00000021298) #12	DOHH (ENSBGRG00000021664) #13	ENSBGRG00000000370 #14	ENSBGRG00000000421 #15	ENSBGRG00000000535 #15	CELF5 (ENSBGRG00000000565) #16	NCLN (ENSBGRG00000000641) #17	S1PR4 (ENSBGRG00000000735) #18	GNA15 (ENSBGRG00000000748) #19	GNA11 (ENSBGRG00000000769) #20	TLE5 (ENSBGRG00000000793) #21	TLE2 (ENSBGRG00000000857) #22	TLE6 (ENSBGRG00000001034) ##22	ENSBGRG00000001055 #24	ENSBGRG00000001060 #24	ZNF555 (ENSBGRG00000001084)	ZNF554 (ENSBGRG00000001093)	THOP1 (ENSBGRG00000001102)	ENSBGRG00000001155	SGTA (ENSBGRG00000001178)	SLC39A3 (ENSBGRG00000001205)	GNG7 (ENSBGRG00000001244)	ENSBGRG00000001269	LMNB2 (ENSBGRG00000001309)	TIMM13 (ENSBGRG00000001356)	TMPRSS9 (ENSBGRG00000001387)	SPPL2B (ENSBGRG00000001417)
Wild yak	MODERN SPECIES	144			MFSD12 (ENSBMUG00000012651) #10	TEKTIP1 (ENSBMUG00000012671) #11	FZR1 (ENSBMUG00000012724) #12	DOHH (ENSBMUG00000012771) #13	ENSBMUG00000012785 #14	NFIC (ENSBMUG00000012806) #15	ENSBMUG00000012820	CELF5 (ENSBMUG00000012845) #16	NCLN (ENSBMUG00000012866) #17	S1PR4 (ENSBMUG00000012890) #18	GNA15 (ENSBMUG00000012918) #19	GNA11 (ENSBMUG00000012972) #20	TLE5 (ENSBMUG00000012985) #21	TLE2 (ENSBMUG00000013141) #22	ENSBMUG00000013196 ##22	ENSBMUG00000013233 #24	ZNF555 (ENSBMUG00000013266)	ZNF554 (ENSBMUG00000013275)	THOP1 (ENSBMUG00000013288)	SGTA (ENSBMUG00000013321)	SLC39A3 (ENSBMUG00000013351)	DIRAS1 (ENSBMUG00000013364)	GNG7 (ENSBMUG00000013376)	GADD45B (ENSBMUG00000013398)	LMNB2 (ENSBMUG00000013421)	TIMM13 (ENSBMUG00000013464)	TMPRSS9 (ENSBMUG00000013490)	SPPL2B (ENSBMUG00000013515)	ENSBMUG00000013528
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	32	TBXA2R (ENSCHYG00000003508) #7	GIPC3 (ENSCHYG00000003521) #8	HMG20B (ENSCHYG00000003538) #9	MFSD12 (ENSCHYG00000003571) #10	ENSCHYG00000003615 #11	FZR1 (ENSCHYG00000003667) #12	ENSCHYG00000003765 #13	SMIM24 (ENSCHYG00000003795) #14	NFIC (ENSCHYG00000003885) #15	CELF5 (ENSCHYG00000004001) #16	NCLN (ENSCHYG00000004043) #17	S1PR4 (ENSCHYG00000004078) #18	GNA15 (ENSCHYG00000004083) #19	GNA11 (ENSCHYG00000004093) #20	ENSCHYG00000004111 ##22	ENSCHYG00000004147 #22	TLE6 (ENSCHYG00000004189) ##22	ENSCHYG00000004218 #24	ZNF555 (ENSCHYG00000004235)	ZNF554 (ENSCHYG00000004250)	THOP1 (ENSCHYG00000004286)	SGTA (ENSCHYG00000004319)	SLC39A3 (ENSCHYG00000004339)	DIRAS1 (ENSCHYG00000004359)	GNG7 (ENSCHYG00000004365)	GADD45B (ENSCHYG00000004382)	SPPL2B (ENSCHYG00000004423)	LMNB2 (ENSCHYG00000004498)	TIMM13 (ENSCHYG00000000344)	TMPRSS9 (ENSCHYG00000000368)	LSM7 (ENSCHYG00000000423)
Yarkand deer	MODERN SPECIES	16	ADAMTS9 (ENSCHYG00000017101)	MAGI1 (ENSCHYG00000018496)	ENSCHYG00000021268	SLC25A26 (ENSCHYG00000021357)	LRIG1 (ENSCHYG00000021539)	KBTBD8 (ENSCHYG00000022084)	SUCLG2 (ENSCHYG00000022142)	TAFA1 (ENSCHYG00000022393)	TAFA4 (ENSCHYG00000022432)	EOGT (ENSCHYG00000022524)	TMF1 (ENSCHYG00000022757)	UBA3 (ENSCHYG00000023036)	ARL6IP5 (ENSCHYG00000023632)	LMOD3 (ENSCHYG00000023655)	FRMD4B (ENSCHYG00000023741)	ENSCHYG00000024354 #22	ENSCHYG00000024373	MITF (ENSCHYG00000024471)	MDFIC2 (ENSCHYG00000024686)	ENSCHYG00000024728	FOXP1 (ENSCHYG00000024873)	EIF4E3 (ENSCHYG00000026240)	PROK2 (ENSCHYG00000026260)	RYBP (ENSCHYG00000026283)	SHQ1 (ENSCHYG00000026306)	GXYLT2 (ENSCHYG00000026357)	PPP4R2 (ENSCHYG00000026369)	PDZRN3 (ENSCHYG00000026403)	CNTN3 (ENSCHYG00000026470)	CHL1 (ENSCHYG00000026559)	ENSCHYG00000026610
Camelidae	ANCESTRAL SPECIES	36	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Arabian camel	MODERN SPECIES	14	TBXA2R (ENSCDRG00005005933) #7	GIPC3 (ENSCDRG00005005946) #8	HMG20B (ENSCDRG00005005967) #9	MFSD12 (ENSCDRG00005005999) #10	TEKTIP1 (ENSCDRG00005006055) #11	FZR1 (ENSCDRG00005006089) #12	DOHH (ENSCDRG00005006155) #13	SMIM44 (ENSCDRG00005006180)	SMIM24 (ENSCDRG00005006203) #14	NFIC (ENSCDRG00005006280) #15	ENSCDRG00005006802	NCLN (ENSCDRG00005007008) #17	S1PR4 (ENSCDRG00005007083) #18	GNA15 (ENSCDRG00005007101) #19	GNA11 (ENSCDRG00005007156) #20	TLE2 (ENSCDRG00005007388) #22	ENSCDRG00005008238 ##22	ENSCDRG00005008306 #24	ENSCDRG00005008324 #24	ZNF555 (ENSCDRG00005008365)	ZNF554 (ENSCDRG00005008395)	THOP1 (ENSCDRG00005008423)	SGTA (ENSCDRG00005008488)	SLC39A3 (ENSCDRG00005008533)	DIRAS1 (ENSCDRG00005008559)	GNG7 (ENSCDRG00005008581)	GADD45B (ENSCDRG00005008620)	LMNB2 (ENSCDRG00005008689)	TIMM13 (ENSCDRG00005009445)	TMPRSS9 (ENSCDRG00005009511)	SPPL2B (ENSCDRG00005009635)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000162830.b #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Carnivora	ANCESTRAL SPECIES	6	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Felidae	ANCESTRAL SPECIES	21	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274.b	ENSGT00910000148834	ENSGT00940000160274.a	ENSGT00390000014000
Panthera	ANCESTRAL SPECIES	15	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274.b	ENSGT00910000148834	ENSGT00940000160274.a	ENSGT00390000014000
Tiger	MODERN SPECIES	54	PIAS4 (ENSPTIG00000012378)	EEF2 (ENSPTIG00000012837)	ATCAY (ENSPTIG00000013063)	ENSPTIG00000015790	MRPL54 (ENSPTIG00000017727)	PIP5K1C (ENSPTIG00000018042)	GIPC3 (ENSPTIG00000020400) #8	HMG20B (ENSPTIG00000021062) #9	FZR1 (ENSPTIG00000021304) #12	SMIM24 (ENSPTIG00000021624) #14	NFIC (ENSPTIG00000021743) #15	CELF5 (ENSPTIG00000005338) #16	GNA15 (ENSPTIG00000006851) #19	ENSPTIG00000007808 #20	ENSPTIG00000008105 ##22	TLE2 (ENSPTIG00000008843) #22	ENSPTIG00000010278 ##22	ENSPTIG00000010576	ZNF556 (ENSPTIG00000011070)	ZNF555 (ENSPTIG00000011529)	ZNF554 (ENSPTIG00000011725)	THOP1 (ENSPTIG00000012118)	SGTA (ENSPTIG00000013472)	SLC39A3 (ENSPTIG00000013803)	DIRAS1 (ENSPTIG00000005639)	GNG7 (ENSPTIG00000014250)	GADD45B (ENSPTIG00000014382)	ENSPTIG00000014820	ENSPTIG00000015491	LSM7 (ENSPTIG00000016252)	SF3A2 (ENSPTIG00000017228)
Panthera_a	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918
leopard	MODERN SPECIES	134	GIPC3 (ENSPPRG00000006047) #8	HMG20B (ENSPPRG00000005631) #9	MFSD12 (ENSPPRG00000005281) #10	TEKTIP1 (ENSPPRG00000004778) #11	FZR1 (ENSPPRG00000004528) #12	DOHH (ENSPPRG00000003295) #13	SMIM44 (ENSPPRG00000003091)	SMIM24 (ENSPPRG00000002813) #14	NFIC (ENSPPRG00000002102) #15	CELF5 (ENSPPRG00000001514) #16	NCLN (ENSPPRG00000022717) #17	S1PR4 (ENSPPRG00000014630) #18	GNA15 (ENSPPRG00000023476) #19	GNA11 (ENSPPRG00000023842) #20	TLE5 (ENSPPRG00000023990) #21	TLE2 (ENSPPRG00000024121) #22	TLE6 (ENSPPRG00000019807) ##22	ENSPPRG00000016426
lion	MODERN SPECIES	97										ENSPLOG00000015991	NCLN (ENSPLOG00000016079) #17	S1PR4 (ENSPLOG00000016130) #18	GNA15 (ENSPLOG00000016151) #19	GNA11 (ENSPLOG00000016183) #20	TLE5 (ENSPLOG00000016251) #21	TLE2 (ENSPLOG00000016376) #22	ENSPLOG00000016976 ##22	ENSPLOG00000017040	ENSPLOG00000017059
Cat	MODERN SPECIES	1	ENSFCAG00000051232	GIPC3 (ENSFCAG00000007137) #8	HMG20B (ENSFCAG00000026167) #9	MFSD12 (ENSFCAG00000000883) #10	CA2H19orf71 (ENSFCAG00000000882) #11	FZR1 (ENSFCAG00000002157) #12	DOHH (ENSFCAG00000030060) #13	SMIM24 (ENSFCAG00000052509) #14	NFIC (ENSFCAG00000000880) #15	CELF5 (ENSFCAG00000007127) #16	NCLN (ENSFCAG00000029146) #17	S1PR4 (ENSFCAG00000007126) #18	GNA15 (ENSFCAG00000007124) #19	GNA11 (ENSFCAG00000044642) #20	TLE5 (ENSFCAG00000039147) #21	TLE2 (ENSFCAG00000013863) #22	TLE6 (ENSFCAG00000013862) ##22	ENSFCAG00000035220	ENSFCAG00000050649 #24	ENSFCAG00000052219 #24	ENSFCAG00000052308 #24	ENSFCAG00000048662	ENSFCAG00000032030	ZNF555 (ENSFCAG00000022276)	ZNF554 (ENSFCAG00000035295)	ENSFCAG00000049627	THOP1 (ENSFCAG00000015785)	SGTA (ENSFCAG00000015780)	SLC39A3 (ENSFCAG00000033069)	GADD45B (ENSFCAG00000013046)	LMNB2 (ENSFCAG00000013045)
Caniformia	ANCESTRAL SPECIES	4	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Canidae	ANCESTRAL SPECIES		ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT01030000239476	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Dingo	MODERN SPECIES	112	CACTIN (ENSCAFG00020018320)	TBXA2R (ENSCAFG00020018318) #7	GIPC3 (ENSCAFG00020018309) #8	HMG20B (ENSCAFG00020018306) #9	MFSD12 (ENSCAFG00020018303) #10	TEKTIP1 (ENSCAFG00020018300) #11	FZR1 (ENSCAFG00020018296) #12	DOHH (ENSCAFG00020018295) #13	ENSCAFG00020018292 #14	NFIC (ENSCAFG00020018281) #15	CELF5 (ENSCAFG00020018264) #16	NCLN (ENSCAFG00020018259) #17	GNA15 (ENSCAFG00020018249) #19	GNA11 (ENSCAFG00020018245) #20	TLE5 (ENSCAFG00020018242) #21	TLE2 (ENSCAFG00020018233) #22	ENSCAFG00020018228 ##22	ENSCAFG00020018225	ENSCAFG00020018224	ZNF556 (ENSCAFG00020018221)	ZNF555 (ENSCAFG00020018217)	ZNF554 (ENSCAFG00020018214)	THOP1 (ENSCAFG00020018211)	SGTA (ENSCAFG00020018207)	SLC39A3 (ENSCAFG00020018206)	DIRAS1 (ENSCAFG00020018203)	GNG7 (ENSCAFG00020018201)	GADD45B (ENSCAFG00020018199)	ENSCAFG00020018198	LMNB2 (ENSCAFG00020018194)	TIMM13 (ENSCAFG00020018192)
Dog	MODERN SPECIES	12	ENSCAFG00845008979	GIPC3 (ENSCAFG00845009000) #8	ENSCAFG00845009058 #9	MFSD12 (ENSCAFG00845009196) #10	C20H19orf71 (ENSCAFG00845009301) #11	FZR1 (ENSCAFG00845009377) #12	DOHH (ENSCAFG00845009508) #13	SMIM24 (ENSCAFG00845009603) #14	NFIC (ENSCAFG00845009756) #15	CELF5 (ENSCAFG00845010202) #16	NCLN (ENSCAFG00845010334) #17	S1PR4 (ENSCAFG00845010367) #18	GNA15 (ENSCAFG00845010390) #19	TLE5 (ENSCAFG00845010466) #21	GNA11 (ENSCAFG00845010571) #20	TLE2 (ENSCAFG00845010748) #22	ENSCAFG00845011118 ##22	ENSCAFG00845011169	ZNF556 (ENSCAFG00845011193)	ZNF555 (ENSCAFG00845011220)	ZNF554 (ENSCAFG00845011258)	THOP1 (ENSCAFG00845011294)	SGTA (ENSCAFG00845011392)	SLC39A3 (ENSCAFG00845011490)	DIRAS1 (ENSCAFG00845011531)	GADD45B (ENSCAFG00845011680)	LMNB2 (ENSCAFG00845011756)	ENSCAFG00845011879	TMPRSS9 (ENSCAFG00845011907)	SPPL2B (ENSCAFG00845011987)	LSM7 (ENSCAFG00845012173)
Red fox	MODERN SPECIES	163	HMG20B (ENSVVUG00000003300) #9	MFSD12 (ENSVVUG00000003293) #10	CUNH19orf71 (ENSVVUG00000003289) #11	FZR1 (ENSVVUG00000003282) #12	DOHH (ENSVVUG00000003275) #13	SMIM24 (ENSVVUG00000003269) #14	NFIC (ENSVVUG00000003261) #15	ENSVVUG00000003252 #16	ENSVVUG00000003246	ENSVVUG00000003242 #16	NCLN (ENSVVUG00000002992) #17	S1PR4 (ENSVVUG00000002968) #18	GNA15 (ENSVVUG00000002952) #19	GNA11 (ENSVVUG00000002939) #20	ENSVVUG00000002912 ##22	TLE2 (ENSVVUG00000002888) #22	ENSVVUG00000002863 ##22	ENSVVUG00000002857	ENSVVUG00000002849	ZNF556 (ENSVVUG00000002841)	ZNF555 (ENSVVUG00000002836)	ZNF554 (ENSVVUG00000002833)	THOP1 (ENSVVUG00000002818)	SGTA (ENSVVUG00000002809)	SLC39A3 (ENSVVUG00000002808)	DIRAS1 (ENSVVUG00000002802)	GNG7 (ENSVVUG00000002792)	GADD45B (ENSVVUG00000002785)	LMNB2 (ENSVVUG00000002769)	TIMM13 (ENSVVUG00000002756)	TMPRSS9 (ENSVVUG00000002688)
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
American mink	MODERN SPECIES	175	TBXA2R (ENSNVIG00000006523) #7	GIPC3 (ENSNVIG00000006504) #8	HMG20B (ENSNVIG00000006433) #9	MFSD12 (ENSNVIG00000006407) #10	TEKTIP1 (ENSNVIG00000006395) #11	FZR (ENSNVIG00000006305) #12	DOHH (ENSNVIG00000006293) #13	CS077 (ENSNVIG00000006275) #14	NFIC (ENSNVIG00000006247) #15	ENSNVIG00000006149	NCLN (ENSNVIG00000006116) #17	S1PR4 (ENSNVIG00000006107) #18	GNA15 (ENSNVIG00000006085) #19	GNA11 (ENSNVIG00000006010) #20	ENSNVIG00000005979 ##22	TLE2 (ENSNVIG00000005768) #22	ENSNVIG00000005725 ##22	ENSNVIG00000005595	ENSNVIG00000005559	ZNF556 (ENSNVIG00000005545)	ZNF555 (ENSNVIG00000005522)	ZNF554 (ENSNVIG00000005517)	THOP1 (ENSNVIG00000005485)	SGTA (ENSNVIG00000005464)	SLC39A3 (ENSNVIG00000005457)	DIRAS1 (ENSNVIG00000005451)	GNG7 (ENSNVIG00000005433)	GA45B (ENSNVIG00000005407)	LMNB2 (ENSNVIG00000005371)	TIMM13 (ENSNVIG00000005354)	TMPRSS9 (ENSNVIG00000005296)
Ursidae	ANCESTRAL SPECIES	20	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Giant Panda	MODERN SPECIES	14	ENSAMEG00000028252	GIPC3 (ENSAMEG00000005731) #8	ENSAMEG00000030856 #9	MFSD12 (ENSAMEG00000005668) #10	ENSAMEG00000030978 #11	ENSAMEG00000005619 #13	ENSAMEG00000028568	ENSAMEG00000030871	NFIC (ENSAMEG00000005577) #15	ENSAMEG00000005527	NCLN (ENSAMEG00000005496) #17	S1PR4 (ENSAMEG00000005495) #18	GNA15 (ENSAMEG00000005493) #19	GNA11 (ENSAMEG00000005458) #20	ENSAMEG00000029178 ##22	TLE2 (ENSAMEG00000005391) #22	TLE6 (ENSAMEG00000005371) ##22	ENSAMEG00000029425	ZNF556 (ENSAMEG00000005362)	ZNF555 (ENSAMEG00000005361)	ENSAMEG00000005363	ZNF554 (ENSAMEG00000005360)	THOP1 (ENSAMEG00000005314)	SGTA (ENSAMEG00000005257)	SLC39A3 (ENSAMEG00000028287)	DIRAS1 (ENSAMEG00000018705)	GNG7 (ENSAMEG00000005631)	LMNB2 (ENSAMEG00000005548)	TIMM13 (ENSAMEG00000028321)	TMPRSS9 (ENSAMEG00000005520)	SPPL2B (ENSAMEG00000005486)
Ursus	ANCESTRAL SPECIES	16	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.b #24	ENSGT00940000163425.c	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Polar bear	DUPLICATION
Polar bear	MODERN SPECIES	455	MRPL54 (ENSUMAG00000007416)	PIP5K1C (ENSUMAG00000007390)	ENSUMAG00000007385	ENSUMAG00000007383	ENSUMAG00000007381 #8	MFSD12 (ENSUMAG00000007358) #10	TEKTIP1 (ENSUMAG00000007354) #11	FZR1 (ENSUMAG00000007307) #12	ENSUMAG00000007296	NFIC (ENSUMAG00000007265) #15	ENSUMAG00000007241	GNA15 (ENSUMAG00000007215) #19	GNA11 (ENSUMAG00000007211) #20	ENSUMAG00000007196 ##22	ENSUMAG00000007194 #22	ENSUMAG00000007190 #22	ENSUMAG00000007167	ENSUMAG00000007158	ENSUMAG00000007151 #24	ENSUMAG00000007139	ENSUMAG00000007135 #24	ZNF555 (ENSUMAG00000007119)	ZNF554 (ENSUMAG00000007110)	THOP1 (ENSUMAG00000006911)	SGTA (ENSUMAG00000006851)	SLC39A3 (ENSUMAG00000006848)	DIRAS1 (ENSUMAG00000006847)	GNG7 (ENSUMAG00000006844)	GADD45B (ENSUMAG00000006840)	ENSUMAG00000006827	ENSUMAG00000006808
Polar bear	MODERN SPECIES	455	ENSUMAG00000007421	MRPL54 (ENSUMAG00000007416)	PIP5K1C (ENSUMAG00000007390)	ENSUMAG00000007385	ENSUMAG00000007383	ENSUMAG00000007381 #8	MFSD12 (ENSUMAG00000007358) #10	TEKTIP1 (ENSUMAG00000007354) #11	FZR1 (ENSUMAG00000007307) #12	ENSUMAG00000007296	NFIC (ENSUMAG00000007265) #15	ENSUMAG00000007241	GNA15 (ENSUMAG00000007215) #19	GNA11 (ENSUMAG00000007211) #20	ENSUMAG00000007196 ##22	ENSUMAG00000007194 #22	ENSUMAG00000007190 #22	ENSUMAG00000007167	ENSUMAG00000007158	ENSUMAG00000007151 #24	ENSUMAG00000007139	ENSUMAG00000007135 #24	ZNF555 (ENSUMAG00000007119)	ZNF554 (ENSUMAG00000007110)	THOP1 (ENSUMAG00000006911)	SGTA (ENSUMAG00000006851)	SLC39A3 (ENSUMAG00000006848)	DIRAS1 (ENSUMAG00000006847)	GNG7 (ENSUMAG00000006844)	GADD45B (ENSUMAG00000006840)	ENSUMAG00000006827
American black bear	DUPLICATION
American black bear	MODERN SPECIES	7571																ENSUAMG00000011419 #22	ENSUAMG00000011418 ##22
American black bear	MODERN SPECIES	8865																ENSUAMG00000000868 #22
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Equus	ANCESTRAL SPECIES	34	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000162830.a.a.b.a.a.a #24	ENSGT00940000162830.a.a.b.a.a.b #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.a.a.b.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915
Donkey	MODERN SPECIES	12	TBXA2R (ENSEASG00005022250) #7	GIPC3 (ENSEASG00005022246) #8	HMG20B (ENSEASG00005022241) #9	MFSD12 (ENSEASG00005022236) #10	TEKTIP1 (ENSEASG00005036506) #11	ENSEASG00005022196 #12	ENSEASG00005022139 #13	ENSEASG00005022128 #15	ENSEASG00005028009 #14	ENSEASG00005022118 #16	NCLN (ENSEASG00005022112) #17	S1PR4 (ENSEASG00005027401) #18	GNA15 (ENSEASG00005022106) #19	GNA11 (ENSEASG00005030989) #20	TLE5 (ENSEASG00005022089) #21	TLE2 (ENSEASG00005022082) #22	ENSEASG00005036612 ##22	ENSEASG00005032268 #24	ENSEASG00005029282 #24	ENSEASG00005022064	ENSEASG00005031905 #24	ENSEASG00005022062 #24	ENSEASG00005022060	ENSEASG00005025823 #24	ENSEASG00005022057 #24	ENSEASG00005022054	ENSEASG00005037683	ZNF555 (ENSEASG00005022049)	ZNF554 (ENSEASG00005032271)	THOP1 (ENSEASG00005022042)	SGTA (ENSEASG00005022030)
Horse	MODERN SPECIES	28	PIP5K1C (ENSECAG00000033728)	CACTIN (ENSECAG00000039454)	ENSECAG00000051988	TBXA2R (ENSECAG00000038039) #7	ENSECAG00000033958 #9	MFSD12 (ENSECAG00000050601) #10	TEKTIP1 (ENSECAG00000043412) #11	FZR1 (ENSECAG00000016933) #12	DOHH (ENSECAG00000016441) #13	NFIC (ENSECAG00000008134) #15	ENSECAG00000044034 #14	CELF5 (ENSECAG00000018055) #16	NCLN (ENSECAG00000015197) #17	S1PR4 (ENSECAG00000001851) #18	GNA11 (ENSECAG00000023654) #20	TLE2 (ENSECAG00000024314) #22	TLE6 (ENSECAG00000022366) ##22	ENSECAG00000001472	ENSECAG00000043972 #24	ENSECAG00000043845	ENSECAG00000055018 #24	ENSECAG00000033586 #24	ZNF57 (ENSECAG00000032997)	ENSECAG00000040891 #24	ENSECAG00000050855	ENSECAG00000045330	ENSECAG00000056588 #24	ENSECAG00000031178	ZNF556 (ENSECAG00000021726)	ZNF555 (ENSECAG00000020559)	ZNF554 (ENSECAG00000019482)
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.a #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.a #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Greater horseshoe bat	MODERN SPECIES	9	GIPC3 (ENSRFEG00010020593) #8	HMG20B (ENSRFEG00010020638) #9	MFSD12 (ENSRFEG00010020692) #10	TEKTIP1 (ENSRFEG00010020734) #11	FZR1 (ENSRFEG00010020757) #12	DOHH (ENSRFEG00010020783) #13	SMIM44 (ENSRFEG00010020793)	SMIM24 (ENSRFEG00010020808) #14	NFIC (ENSRFEG00010020868) #15	ENSRFEG00010020980	NCLN (ENSRFEG00010021024) #17	S1PR4 (ENSRFEG00010007509) #18	GNA15 (ENSRFEG00010007554) #19	GNA11 (ENSRFEG00010007595) #20	TLE5 (ENSRFEG00010007634) #21	TLE2 (ENSRFEG00010007728) #22	TLE6 (ENSRFEG00010008056) ##22	ENSRFEG00010008173 #24	ENSRFEG00010008195	ENSRFEG00010008210 #24	ENSRFEG00010008227 #24	ENSRFEG00010008241 #24	ZNF556 (ENSRFEG00010008289)	ZNF555 (ENSRFEG00010008378)	ZNF554 (ENSRFEG00010008441)	THOP1 (ENSRFEG00010008468)	SGTA (ENSRFEG00010008608)	ENSRFEG00010008648	SLC39A3 (ENSRFEG00010008681)	DIRAS1 (ENSRFEG00010008719)	GNG7 (ENSRFEG00010008752)
Megabat	MODERN SPECIES	2452																TLE2 (ENSPVAG00000002285) #22	TLE6 (ENSPVAG00000002284) ##22	ENSPVAG00000002283 #24
Atlantogenata	ANCESTRAL SPECIES	79	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Xenarthra	ANCESTRAL SPECIES	1837																ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Armadillo	MODERN SPECIES	3321																TLE2 (ENSDNOG00000005685) #22	ENSDNOG00000047548 ##22
Afrotheria	ANCESTRAL SPECIES	97	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Afrotheria_a	ANCESTRAL SPECIES	101	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Elephant	MODERN SPECIES	60	TBXA2R (ENSLAFG00000027874) #7	ENSLAFG00000030325	GIPC3 (ENSLAFG00000007849) #8	HMG20B (ENSLAFG00000007845) #9	MFSD12 (ENSLAFG00000031512) #10	TEKTIP1 (ENSLAFG00000032270) #11	FZR1 (ENSLAFG00000029400) #12	DOHH (ENSLAFG00000011920) #13	SMIM44 (ENSLAFG00000026671)	ENSLAFG00000029999	NFIC (ENSLAFG00000007134) #15	CELF5 (ENSLAFG00000026387) #16	NCLN (ENSLAFG00000028713) #17	S1PR4 (ENSLAFG00000000780) #18	GNA11 (ENSLAFG00000011237) #20	TLE2 (ENSLAFG00000007679) #22	ENSLAFG00000022423 ##22
Hyrax	MODERN SPECIES	582															TLE5 (ENSPCAG00000003513) #21	TLE2 (ENSPCAG00000003390) #22	ENSPCAG00000003289 ##22
Tenrec	MODERN SPECIES	4801																TLE2 (ENSETEG00000007011) #22
Sauria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Archelosauria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Archosauria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Aves	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Neognathae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Galloanserae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Phasianidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Japanese quail	MODERN SPECIES	1	ENSCJPG00005021133	ANPEP (ENSCJPG00005021131)	RASGRF1 (ENSCJPG00005021129)	CTSH (ENSCJPG00005021127)	BLM (ENSCJPG00005021125)	WDR76 (ENSCJPG00005021123)	FRMD5 (ENSCJPG00005021120)	GOLM2 (ENSCJPG00005021117)	CTDSPL2 (ENSCJPG00005021113)	EIF3J (ENSCJPG00005021111)	SPG11 (ENSCJPG00005021065)	CIAO2A (ENSCJPG00005021059)	ADAMTS7 (ENSCJPG00005021058)	MORF4L2 (ENSCJPG00005021057)	UACA (ENSCJPG00005021056)	ENSCJPG00005021054 #22	ENSCJPG00005021053 ##22	KIF23 (ENSCJPG00005021004)	PAQR5 (ENSCJPG00005021003)	GLCE (ENSCJPG00005021002)	ENSCJPG00005021000	CORO2B (ENSCJPG00005020999)	ITGA11 (ENSCJPG00005020998)	FEM1B (ENSCJPG00005020997)	CLN6 (ENSCJPG00005020996)	CALML4 (ENSCJPG00005020995)	PIAS1 (ENSCJPG00005020993)	SKOR1 (ENSCJPG00005020991)	MAP2K5 (ENSCJPG00005020975)	C15orf61 (ENSCJPG00005020973)	IQCH (ENSCJPG00005020972)
Phasianidae_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Turkey	MODERN SPECIES	1299	ENSMGAG00000017159	ENSMGAG00000005893	ENSMGAG00000018457	ENSMGAG00000006375	ENSMGAG00000017644	ENSMGAG00000017786	ENSMGAG00000020303	ENSMGAG00000020707	GCNT1 (ENSMGAG00000019837)	PRUNE2 (ENSMGAG00000001274)	ENSMGAG00000019782	VPS13A (ENSMGAG00000019244)	GNAQ (ENSMGAG00000006089)	CEP78 (ENSMGAG00000019061)	PSAT1 (ENSMGAG00000010052)	ENSMGAG00000018334 #22	TLE1 (ENSMGAG00000022724) ##22	RASEF (ENSMGAG00000018747)	FRMD3 (ENSMGAG00000016622)	ENSMGAG00000020985	UBQLN1 (ENSMGAG00000006323)	IDNK (ENSMGAG00000020235)	GKAP1 (ENSMGAG00000006268)	HNRNPK (ENSMGAG00000006302)	ENSMGAG00000023025	ENSMGAG00000006314	RMI1 (ENSMGAG00000016052)	SLC28A3 (ENSMGAG00000021465)	NTRK2 (ENSMGAG00000006362)	ENSMGAG00000021762	NAA35 (ENSMGAG00000016673)
Anatidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Duck	MODERN SPECIES	20	PTBP1 (ENSAPLG00000006173)	ENSAPLG00000026848	ENSAPLG00000024410	FSTL3 (ENSAPLG00000029654)	ENSAPLG00000024489	ENSAPLG00000029258	RNF126 (ENSAPLG00000002542)	POLRMT (ENSAPLG00000003051)	HCN2 (ENSAPLG00000018891)	BSG (ENSAPLG00000011010)	TPGS1 (ENSAPLG00000030022)	ENSAPLG00000020284	ENSAPLG00000016255	ENSAPLG00000022748	PLPP2 (ENSAPLG00000002405)	ENSAPLG00000023429 #22	ENSAPLG00000028560 ##22	ENSAPLG00000029543 ##22	GNA11 (ENSAPLG00000004066) #20	ENSAPLG00000019679	ENSAPLG00000004622	S1PR4 (ENSAPLG00000001591) #18	NCLN (ENSAPLG00000004844) #17	CELF5 (ENSAPLG00000005174) #16	HSD11B1L (ENSAPLG00000005717)	MICOS13 (ENSAPLG00000001598)	ENSAPLG00000005780	ENSAPLG00000006355	ENSAPLG00000020158	ENSAPLG00000019522	MAU2 (ENSAPLG00000002818)
African ostrich	MODERN SPECIES	995															MIER2 (ENSSCUG00000018643)	ENSSCUG00000018645 #22	ENSSCUG00000018649 ##22	ENSSCUG00000018652 ##22	GNA11 (ENSSCUG00000018653) #20	GNA15 (ENSSCUG00000018654) #19	ENSSCUG00000012565	ENSSCUG00000012569	S1PR4 (ENSSCUG00000012573) #18	NCLN (ENSSCUG00000012578) #17	CELF5 (ENSSCUG00000012584) #16	ENSSCUG00000012587	MICOS13 (ENSSCUG00000012589)	ENSSCUG00000012591	ENSSCUG00000012619
Gnathostomata	DUPLICATION
Gnathostomata	DUPLICATION
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Euteleostomi	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Tetrapoda	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Amniota	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Sauria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Lepidosauria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Episquamata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Toxicofera	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Elapidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Indian cobra	MODERN SPECIES		FSD1 (ENSNNAG00000002240)	SHD (ENSNNAG00000002229)	DPP9 (ENSNNAG00000001991)	ARRDC5 (ENSNNAG00000001935)	UHRF1 (ENSNNAG00000001798)	KDM4B (ENSNNAG00000001688)	PTPRS (ENSNNAG00000000956)	ENSNNAG00000000816	ENSNNAG00000000757	NCLN (ENSNNAG00000000724) #17	S1PR4 (ENSNNAG00000000717) #18	ENSNNAG00000000703 #19	ENSNNAG00000000695 #19	GNA11 (ENSNNAG00000000685) #20	ENSNNAG00000000672 ##22	TLE5 (ENSNNAG00000000665) #21	ENSNNAG00000000645 ##22	PLPP2 (ENSNNAG00000000631)	MIER2 (ENSNNAG00000000612)	ENSNNAG00000000590	TPGS1 (ENSNNAG00000000579)	CDC34 (ENSNNAG00000000566)	BSG (ENSNNAG00000000544)	ENSNNAG00000000523	ENSNNAG00000000489	ENSNNAG00000000474	SBNO2 (ENSNNAG00000000450)	STK11 (ENSNNAG00000000419)	ENSNNAG00000000300	CIRBP (ENSNNAG00000002337)	MIDN (ENSNNAG00000002329)
Mammalia	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Theria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Eutheria	ANCESTRAL SPECIES	24	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Atlantogenata	ANCESTRAL SPECIES	79	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Afrotheria	ANCESTRAL SPECIES	97	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Afrotheria_a	ANCESTRAL SPECIES	101	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Hyrax	MODERN SPECIES	582																TLE5 (ENSPCAG00000003513) #21	TLE2 (ENSPCAG00000003390) #22	ENSPCAG00000003289 ##22
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.b #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000011698.c.a.c.b	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.b #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Suina	ANCESTRAL SPECIES	16	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01070000257262	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274
Pig	MODERN SPECIES	10	ENSSSCG00000063127	GIPC3 (ENSSSCG00000054746) #8	HMG20B (ENSSSCG00000040421) #9	MFSD12 (ENSSSCG00000026169) #10	TEKTIP1 (ENSSSCG00000056892) #11	FZR1 (ENSSSCG00000013481) #12	DOHH (ENSSSCG00000013478) #13	SMIM44 (ENSSSCG00000049629)	ENSSSCG00000038067 #14	NFIC (ENSSSCG00000036537) #15	CELF5 (ENSSSCG00000013476) #16	NCLN (ENSSSCG00000013475) #17	S1PR4 (ENSSSCG00000013474) #18	GNA15 (ENSSSCG00000013473) #19	GNA11 (ENSSSCG00000029279) #20	TLE5 (ENSSSCG00000032265) #21	TLE2 (ENSSSCG00000028995) #22	ENSSSCG00000024588 ##22	ENSSSCG00000053447	ENSSSCG00000036792	ENSSSCG00000034545 #24	ENSSSCG00000013471 #24	ENSSSCG00000039774	ZNF555 (ENSSSCG00000013469)	ZNF554 (ENSSSCG00000038635)	THOP1 (ENSSSCG00000013468)	SGTA (ENSSSCG00000013467)	DIRAS1 (ENSSSCG00000038013)	GNG7 (ENSSSCG00000033949)	GADD45B (ENSSSCG00000022689)	LMNB2 (ENSSSCG00000026784)
Chacoan peccary	MODERN SPECIES	770	TBXA2R (ENSCWAG00000010917) #7	GIPC3 (ENSCWAG00000010858) #8	HMG20B (ENSCWAG00000010811) #9	MFSD12 (ENSCWAG00000010718) #10	TEKTIP1 (ENSCWAG00000010670) #11	FZR1 (ENSCWAG00000010574) #12	DOHH (ENSCWAG00000010524) #13	SMIM44 (ENSCWAG00000010490)	SMIM24 (ENSCWAG00000010463) #14	NFIC (ENSCWAG00000010134) #15	CELF5 (ENSCWAG00000009942) #16	NCLN (ENSCWAG00000009813) #17	S1PR4 (ENSCWAG00000009788) #18	GNA15 (ENSCWAG00000009750) #19	GNA11 (ENSCWAG00000009699) #20	TLE5 (ENSCWAG00000009613) #21	TLE2 (ENSCWAG00000008524) #22	ENSCWAG00000008333 ##22	ENSCWAG00000008275	ZNF555 (ENSCWAG00000008231)	ENSCWAG00000008154	THOP1 (ENSCWAG00000008013)	SGTA (ENSCWAG00000007961)	SLC39A3 (ENSCWAG00000007922)	DIRAS1 (ENSCWAG00000007888)	GNG7 (ENSCWAG00000019144)	GADD45B (ENSCWAG00000019115)	LMNB2 (ENSCWAG00000019057)	TIMM13 (ENSCWAG00000019016)	TMPRSS9 (ENSCWAG00000018773)	SPPL2B (ENSCWAG00000018685)
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000011698.c.a.c.b	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Camelidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21
Arabian camel	MODERN SPECIES	21	RMDN1 (ENSCDRG00005017761)	CPNE3 (ENSCDRG00005017793)	CNGB3 (ENSCDRG00005017849)	ENSCDRG00005017946	MMP16 (ENSCDRG00005017987)	ENSCDRG00005018022	ENSCDRG00005018045	RIPK2 (ENSCDRG00005018065)	ENSCDRG00005018102	ENSCDRG00005018116	OSGIN2 (ENSCDRG00005018136)	NBN (ENSCDRG00005018199)	DECR1 (ENSCDRG00005018340)	CALB1 (ENSCDRG00005018409)	ENSCDRG00005018459	ENSCDRG00005018476 #21	ENSCDRG00005018568
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Pecora	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Percora_a	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Bovidae	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Caprinae	ANCESTRAL SPECIES	3	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Goat	MODERN SPECIES	26	CACTIN (ENSCHIG00000026750)	TBXA2R (ENSCHIG00000012747) #7	GIPC3 (ENSCHIG00000018804) #8	HMG20B (ENSCHIG00000023604) #9	TEKTIP1 (ENSCHIG00000012701) #11	MFSD12 (ENSCHIG00000024505) #10	FZR1 (ENSCHIG00000014824) #12	DOHH (ENSCHIG00000023284) #13	SMIM24 (ENSCHIG00000016053) #14	NFIC (ENSCHIG00000015364) #15	CELF5 (ENSCHIG00000004008) #16	NCLN (ENSCHIG00000021992) #17	S1PR4 (ENSCHIG00000012284) #18	GNA15 (ENSCHIG00000006621) #19	GNA11 (ENSCHIG00000012068) #20	TLE5 (ENSCHIG00000012967) #21	TLE2 (ENSCHIG00000026991) #22	TLE6 (ENSCHIG00000018660) ##22	ENSCHIG00000011999 #24	ENSCHIG00000013771 #24	ZNF555 (ENSCHIG00000013462)	ZNF554 (ENSCHIG00000021466)	THOP1 (ENSCHIG00000013949)	SGTA (ENSCHIG00000025763)	SLC39A3 (ENSCHIG00000019215)	DIRAS1 (ENSCHIG00000004255)	GNG7 (ENSCHIG00000025311)	GADD45B (ENSCHIG00000011819)	LMNB2 (ENSCHIG00000013360)	TIMM13 (ENSCHIG00000003337)	TMPRSS9 (ENSCHIG00000017597)
Rambouillet Sheep	MODERN SPECIES	21	CACTIN (ENSOARG00020018654)	TBXA2R (ENSOARG00020018783) #7	GIPC3 (ENSOARG00020018810) #8	HMG20B (ENSOARG00020018879) #9	MFSD12 (ENSOARG00020018933) #10	TEKTIP1 (ENSOARG00020019053) #11	FZR1 (ENSOARG00020019125) #12	DOHH (ENSOARG00020019251) #13	SMIM24 (ENSOARG00020019336) #14	NFIC (ENSOARG00020019406) #15	CELF5 (ENSOARG00020019796) #16	NCLN (ENSOARG00020019971) #17	S1PR4 (ENSOARG00020020029) #18	GNA15 (ENSOARG00020020045) #19	GNA11 (ENSOARG00020020092) #20	TLE5 (ENSOARG00020020135) #21	TLE2 (ENSOARG00020020198) #22	ENSOARG00020021289 ##22	ENSOARG00020021357	ZNF555 (ENSOARG00020021394)	ZNF554 (ENSOARG00020021423)	THOP1 (ENSOARG00020021465)	SGTA (ENSOARG00020021585)	SLC39A3 (ENSOARG00020021617)	DIRAS1 (ENSOARG00020021668)	GNG7 (ENSOARG00020021685)	GADD45B (ENSOARG00020021717)	LMNB2 (ENSOARG00020021756)	TIMM13 (ENSOARG00020021880)	TMPRSS9 (ENSOARG00020021920)	SPPL2B (ENSOARG00020022087)
Bovinae	ANCESTRAL SPECIES	2	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00960000187413	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Bos	ANCESTRAL SPECIES	3	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00960000187413	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00960000187413	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT01100000263712.a.b.a.a	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Hybrid Bos Indicus	MODERN SPECIES	26	TBXA2R (ENSBIXG00005015046) #7	GIPC3 (ENSBIXG00005002213) #8	HMG20B (ENSBIXG00005015091) #9	MFSD12 (ENSBIXG00005015129) #10	TEKTIP1 (ENSBIXG00005015154) #11	FZR1 (ENSBIXG00005006231) #12	ENSBIXG00005015258	DOHH (ENSBIXG00005015281) #13	SMIM24 (ENSBIXG00005015291) #14	ENSBIXG00005015296	NFIC (ENSBIXG00005002308) #15	NCLN (ENSBIXG00005002433) #17	S1PR4 (ENSBIXG00005015709) #18	GNA15 (ENSBIXG00005002453) #19	GNA11 (ENSBIXG00005002462) #20	TLE5 (ENSBIXG00005015803) #21	TLE2 (ENSBIXG00005015910) #22	TLE6 (ENSBIXG00005002519) ##22	ENSBIXG00005015961 #24	ENSBIXG00005015965 #24	ZNF555 (ENSBIXG00005015972)	ZNF554 (ENSBIXG00005002533)	THOP1 (ENSBIXG00005016046)	SGTA (ENSBIXG00005016070)	ENSBIXG00005002558	SLC39A3 (ENSBIXG00005016121)	DIRAS1 (ENSBIXG00005016138)	GNG7 (ENSBIXG00005016154)	GADD45B (ENSBIXG00005002579)	LMNB2 (ENSBIXG00005016199)	TIMM13 (ENSBIXG00005016236)
Cow	MODERN SPECIES	26	TEKTIP1 (ENSBTAG00000014982) #11	FZR1 (ENSBTAG00000031387) #12	ENSBTAG00000051400	DOHH (ENSBTAG00000005272) #13	SMIM24 (ENSBTAG00000031383) #14	ENSBTAG00000054259	NFIC (ENSBTAG00000008520) #15	ENSBTAG00000049701	ENSBTAG00000051439 #16	ENSBTAG00000054212	CELF5 (ENSBTAG00000021774) #16	NCLN (ENSBTAG00000020759) #17	S1PR4 (ENSBTAG00000000381) #18	GNA15 (ENSBTAG00000019988) #19	GNA11 (ENSBTAG00000012181) #20	TLE5 (ENSBTAG00000031363) #21	TLE2 (ENSBTAG00000001153) #22	TLE6 (ENSBTAG00000001152) ##22	ENSBTAG00000012868 #24	ZNF555 (ENSBTAG00000008397)	ZNF554 (ENSBTAG00000031352)	THOP1 (ENSBTAG00000020446)	SGTA (ENSBTAG00000015090)	ENSBTAG00000048696	SLC39A3 (ENSBTAG00000017706)	DIRAS1 (ENSBTAG00000045981)	GNG7 (ENSBTAG00000007644)	GADD45B (ENSBTAG00000025462)	LMNB2 (ENSBTAG00000013624)	TIMM13 (ENSBTAG00000013623)	TMPRSS9 (ENSBTAG00000000718)
Bos_a	ANCESTRAL SPECIES	2	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Domestic yak	MODERN SPECIES	27	TBXA2R (ENSBGRG00000020972) #7	GIPC3 (ENSBGRG00000021004) #8	HMG20B (ENSBGRG00000021064) #9	MFSD12 (ENSBGRG00000021107) #10	TEKTIP1 (ENSBGRG00000021216) #11	FZR1 (ENSBGRG00000021298) #12	DOHH (ENSBGRG00000021664) #13	ENSBGRG00000000370 #14	ENSBGRG00000000421 #15	ENSBGRG00000000535 #15	CELF5 (ENSBGRG00000000565) #16	NCLN (ENSBGRG00000000641) #17	S1PR4 (ENSBGRG00000000735) #18	GNA15 (ENSBGRG00000000748) #19	GNA11 (ENSBGRG00000000769) #20	TLE5 (ENSBGRG00000000793) #21	TLE2 (ENSBGRG00000000857) #22	TLE6 (ENSBGRG00000001034) ##22	ENSBGRG00000001055 #24	ENSBGRG00000001060 #24	ZNF555 (ENSBGRG00000001084)	ZNF554 (ENSBGRG00000001093)	THOP1 (ENSBGRG00000001102)	ENSBGRG00000001155	SGTA (ENSBGRG00000001178)	SLC39A3 (ENSBGRG00000001205)	GNG7 (ENSBGRG00000001244)	ENSBGRG00000001269	LMNB2 (ENSBGRG00000001309)	TIMM13 (ENSBGRG00000001356)	TMPRSS9 (ENSBGRG00000001387)
Wild yak	MODERN SPECIES	144				MFSD12 (ENSBMUG00000012651) #10	TEKTIP1 (ENSBMUG00000012671) #11	FZR1 (ENSBMUG00000012724) #12	DOHH (ENSBMUG00000012771) #13	ENSBMUG00000012785 #14	NFIC (ENSBMUG00000012806) #15	ENSBMUG00000012820	CELF5 (ENSBMUG00000012845) #16	NCLN (ENSBMUG00000012866) #17	S1PR4 (ENSBMUG00000012890) #18	GNA15 (ENSBMUG00000012918) #19	GNA11 (ENSBMUG00000012972) #20	TLE5 (ENSBMUG00000012985) #21	TLE2 (ENSBMUG00000013141) #22	ENSBMUG00000013196 ##22	ENSBMUG00000013233 #24	ZNF555 (ENSBMUG00000013266)	ZNF554 (ENSBMUG00000013275)	THOP1 (ENSBMUG00000013288)	SGTA (ENSBMUG00000013321)	SLC39A3 (ENSBMUG00000013351)	DIRAS1 (ENSBMUG00000013364)	GNG7 (ENSBMUG00000013376)	GADD45B (ENSBMUG00000013398)	LMNB2 (ENSBMUG00000013421)	TIMM13 (ENSBMUG00000013464)	TMPRSS9 (ENSBMUG00000013490)	SPPL2B (ENSBMUG00000013515)
American bison	MODERN SPECIES	3349	GIPC3 (ENSBBBG00000000334) #8	HMG20B (ENSBBBG00000023190) #9	MFSD12 (ENSBBBG00000023220) #10	TEKTIP1 (ENSBBBG00000023231) #11	FZR1 (ENSBBBG00000023304) #12	ENSBBBG00000023317	DOHH (ENSBBBG00000008411) #13	SMIM44 (ENSBBBG00000023332)	SMIM24 (ENSBBBG00000023341) #14	NFIC (ENSBBBG00000023432) #15	ENSBBBG00000008686	NCLN (ENSBBBG00000023582) #17	S1PR4 (ENSBBBG00000023601) #18	GNA15 (ENSBBBG00000006167) #19	GNA11 (ENSBBBG00000006176) #20	TLE5 (ENSBBBG00000023655) #21	TLE2 (ENSBBBG00000023745) #22	ENSBBBG00000023769 ##22	ZNF555 (ENSBBBG00000023789)	ZNF554 (ENSBBBG00000023794)	THOP1 (ENSBBBG00000023819)	SGTA (ENSBBBG00000023876)	SLC39A3 (ENSBBBG00000000305)	DIRAS1 (ENSBBBG00000023894)	GNG7 (ENSBBBG00000023928)	GADD45B (ENSBBBG00000023938)	LMNB2 (ENSBBBG00000023963)	TIMM13 (ENSBBBG00000023974)	TMPRSS9 (ENSBBBG00000008875)	SPPL2B (ENSBBBG00000008884)	LSM7 (ENSBBBG00000024293)
Siberian musk deer	MODERN SPECIES	99	GIPC3 (ENSMMSG00000023147) #8	HMG20B (ENSMMSG00000000025) #9	MFSD12 (ENSMMSG00000000043) #10	TEKTIP1 (ENSMMSG00000000060) #11	FZR1 (ENSMMSG00000000085) #12	DOHH (ENSMMSG00000000141) #13	ENSMMSG00000000156	SMIM44 (ENSMMSG00000000172)	ENSMMSG00000000182	NFIC (ENSMMSG00000000253) #15	CELF5 (ENSMMSG00000000449) #16	NCLN (ENSMMSG00000000514) #17	S1PR4 (ENSMMSG00000000524) #18	GNA15 (ENSMMSG00000000532) #19	GNA11 (ENSMMSG00000000551) #20	TLE5 (ENSMMSG00000000569) #21	TLE2 (ENSMMSG00000000627) #22	ENSMMSG00000000868 ##22	ENSMMSG00000000894 #24	ENSMMSG00000000907 #24	ZNF555 (ENSMMSG00000000926)	ZNF554 (ENSMMSG00000000944)	THOP1 (ENSMMSG00000000968)	SGTA (ENSMMSG00000001020)	SLC39A3 (ENSMMSG00000001047)	DIRAS1 (ENSMMSG00000001071)	GNG7 (ENSMMSG00000001082)	GADD45B (ENSMMSG00000001115)	LMNB2 (ENSMMSG00000001143)	TIMM13 (ENSMMSG00000001175)	TMPRSS9 (ENSMMSG00000001228)
Cetacea	ANCESTRAL SPECIES	1	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053
Odontoceti	ANCESTRAL SPECIES	1	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282.d #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282.d #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053
Monodontidae	ANCESTRAL SPECIES	17	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282.d #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.b.b #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.a.a #24	ENSGT00940000163425	ENSGT00940000163572	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364	ENSGT00940000159842	ENSGT00940000161753	ENSGT00940000154662	ENSGT01030000234539.a.a.a	ENSGT00940000162053
Beluga whale	MODERN SPECIES	62	TBXA2R (ENSDLEG00000015397) #7	GIPC3 (ENSDLEG00000015384) #8	HMG20B (ENSDLEG00000015376) #9	MFSD12 (ENSDLEG00000015360) #10	ENSDLEG00000015356 #11	FZR1 (ENSDLEG00000020434) #12	DOHH (ENSDLEG00000020431) #13	ENSDLEG00000020426 #14	NFIC (ENSDLEG00000020401) #15	ENSDLEG00000020396 #16	ENSDLEG00000020390	NCLN (ENSDLEG00000020375) #17	S1PR4 (ENSDLEG00000020368) #18	GNA15 (ENSDLEG00000020362) #19	GNA11 (ENSDLEG00000020358) #20	AES (ENSDLEG00000020354) #21	ENSDLEG00000020351 #22	ENSDLEG00000020344 #22	ENSDLEG00000020339 ##22	ENSDLEG00000020335 #24	ENSDLEG00000020333 #24	ENSDLEG00000020329 #24	ZNF555 (ENSDLEG00000020325)	RAX2 (ENSDLEG00000020322)	MATK (ENSDLEG00000020319)	ZFR2 (ENSDLEG00000020297)	ATCAY (ENSDLEG00000020274)	NMRK2 (ENSDLEG00000020268)	DAPK3 (ENSDLEG00000020266)	EEF2 (ENSDLEG00000020260)	PIAS4 (ENSDLEG00000020241)
Narwhal	MODERN SPECIES	298	TBXA2R (ENSMMNG00015000841) #7	ENSMMNG00015000865	GIPC3 (ENSMMNG00015000888) #8	HMG20B (ENSMMNG00015000925) #9	MFSD12 (ENSMMNG00015000990) #10	TEKTIP1 (ENSMMNG00015001041) #11	FZR1 (ENSMMNG00015001082) #12	DOHH (ENSMMNG00015001138) #13	SMIM24 (ENSMMNG00015001179) #14	NFIC (ENSMMNG00015001309) #15	CELF5 (ENSMMNG00015001491) #16	NCLN (ENSMMNG00015001627) #17	S1PR4 (ENSMMNG00015001684) #18	GNA15 (ENSMMNG00015001704) #19	GNA11 (ENSMMNG00015001728) #20	TLE5 (ENSMMNG00015001757) #21	TLE2 (ENSMMNG00015001829) #22	ENSMMNG00015001925 ##22	ENSMMNG00015001966	ENSMMNG00015001988 #24	ENSMMNG00015002004 #24	ZNF555 (ENSMMNG00015002028)	RAX2 (ENSMMNG00015002052)	MATK (ENSMMNG00015002087)	ZFR2 (ENSMMNG00015002202)	ATCAY (ENSMMNG00015002321)	ENSMMNG00015002371	DAPK3 (ENSMMNG00015002394)	EEF2 (ENSMMNG00015002426)	PIAS4 (ENSMMNG00015002478)	ZBTB7A (ENSMMNG00015002508)
Vaquita	MODERN SPECIES	14	TBXA2R (ENSPSNG00000019240) #7	ENSPSNG00000009640	GIPC3 (ENSPSNG00000009792) #8	HMG20B (ENSPSNG00000009908) #9	MFSD12 (ENSPSNG00000009980) #10	TEKTIP1 (ENSPSNG00000010156) #11	FZR1 (ENSPSNG00000010251) #12	DOHH (ENSPSNG00000010352) #13	NFIC (ENSPSNG00000010514) #15	SMIM24 (ENSPSNG00000010742) #14	CELF5 (ENSPSNG00000010809) #16	NCLN (ENSPSNG00000011058) #17	S1PR4 (ENSPSNG00000011138) #18	GNA15 (ENSPSNG00000011159) #19	GNA11 (ENSPSNG00000011201) #20	TLE5 (ENSPSNG00000011246) #21	TLE2 (ENSPSNG00000011350) #22	TLE6 (ENSPSNG00000011672) ##22	ENSPSNG00000011693	ENSPSNG00000011716 #24	ENSPSNG00000011739 #24	ENSPSNG00000011752 #24	ZNF555 (ENSPSNG00000011767)	RAX2 (ENSPSNG00000011818)	MATK (ENSPSNG00000011874)	ZFR2 (ENSPSNG00000012279)	ATCAY (ENSPSNG00000012627)	ENSPSNG00000012851	DAPK3 (ENSPSNG00000012917)	EEF2 (ENSPSNG00000012974)	PIAS4 (ENSPSNG00000013054)
Dolphin	MODERN SPECIES	3252																TLE5 (ENSTTRG00000007488) #21
Sperm whale	MODERN SPECIES	11	DAPK3 (ENSPCTG00005016679)	NMRK2 (ENSPCTG00005016732)	ATCAY (ENSPCTG00005016906)	ENSPCTG00005016973	ENSPCTG00005017007	MATK (ENSPCTG00005017055)	RAX2 (ENSPCTG00005017465)	ENSPCTG00005017499	ZNF555 (ENSPCTG00005017508)	ENSPCTG00005017562 #24	ENSPCTG00005017573 #24	NFIC (ENSPCTG00005017610) #15	SMIM24 (ENSPCTG00005017813) #14	DOHH (ENSPCTG00005017916) #13	ENSPCTG00005017955	TLE5 (ENSPCTG00005018020) #21	TLE2 (ENSPCTG00005018210) #22	PIP5K1C (ENSPCTG00005019009)	ENSPCTG00005019154	ENSPCTG00005019177	APBA3 (ENSPCTG00005019206)	MRPL54 (ENSPCTG00005019236)	MBD3 (ENSPCTG00005019289)	ENSPCTG00005019396	TCF3 (ENSPCTG00005019427)	ONECUT3 (ENSPCTG00005019483)	KLF16 (ENSPCTG00005019503)	ABHD17A (ENSPCTG00005019527)	ADAT3 (ENSPCTG00005019576)	ENSPCTG00005019585	MOB3A (ENSPCTG00005019638)
Blue whale	MODERN SPECIES	14	PIP5K1C (ENSBMSG00010008234)	CACTIN (ENSBMSG00010008209)	TBXA2R (ENSBMSG00010008203) #7	GIPC3 (ENSBMSG00010008191) #8	HMG20B (ENSBMSG00010008175) #9	MFSD12 (ENSBMSG00010008150) #10	FZR1 (ENSBMSG00010008072) #12	DOHH (ENSBMSG00010008048) #13	ENSBMSG00010007983 #14	NFIC (ENSBMSG00010007764) #15	CELF5 (ENSBMSG00010007695) #16	NCLN (ENSBMSG00010007666) #17	S1PR4 (ENSBMSG00010007650) #18	GNA15 (ENSBMSG00010007638) #19	GNA11 (ENSBMSG00010007614) #20	TLE5 (ENSBMSG00010007577) #21	TLE2 (ENSBMSG00010007244) #22	ENSBMSG00010007176 ##22	ENSBMSG00010007156	ENSBMSG00010007140 #24	ENSBMSG00010007121 #24	ENSBMSG00010007090	ENSBMSG00010007074 #24	ZNF555 (ENSBMSG00010007047)	ZFR2 (ENSBMSG00010006830)	ATCAY (ENSBMSG00010006778)	ENSBMSG00010006760	EEF2 (ENSBMSG00010006690)	PIAS4 (ENSBMSG00010004230)	MAP2K2 (ENSBMSG00010004206)	CREB3L3 (ENSBMSG00010004181)
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000162830.b #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Chiroptera	ANCESTRAL SPECIES	31	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.a #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830.a.a.b.a #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Greater horseshoe bat	MODERN SPECIES	9	TBXA2R (ENSRFEG00010020570) #7	GIPC3 (ENSRFEG00010020593) #8	HMG20B (ENSRFEG00010020638) #9	MFSD12 (ENSRFEG00010020692) #10	TEKTIP1 (ENSRFEG00010020734) #11	FZR1 (ENSRFEG00010020757) #12	DOHH (ENSRFEG00010020783) #13	SMIM44 (ENSRFEG00010020793)	SMIM24 (ENSRFEG00010020808) #14	NFIC (ENSRFEG00010020868) #15	ENSRFEG00010020980	NCLN (ENSRFEG00010021024) #17	S1PR4 (ENSRFEG00010007509) #18	GNA15 (ENSRFEG00010007554) #19	GNA11 (ENSRFEG00010007595) #20	TLE5 (ENSRFEG00010007634) #21	TLE2 (ENSRFEG00010007728) #22	TLE6 (ENSRFEG00010008056) ##22	ENSRFEG00010008173 #24	ENSRFEG00010008195	ENSRFEG00010008210 #24	ENSRFEG00010008227 #24	ENSRFEG00010008241 #24	ZNF556 (ENSRFEG00010008289)	ZNF555 (ENSRFEG00010008378)	ZNF554 (ENSRFEG00010008441)	THOP1 (ENSRFEG00010008468)	SGTA (ENSRFEG00010008608)	ENSRFEG00010008648	SLC39A3 (ENSRFEG00010008681)	DIRAS1 (ENSRFEG00010008719)
Equus	ANCESTRAL SPECIES	34	ENSGT00520000060565	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000182755.b.a.a.a.b	ENSGT00940000162830.a.a.b.a.a.a #24	ENSGT00940000162830.a.a.b.a.a.b #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.a.a.b.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231
Donkey	MODERN SPECIES	12	CACTIN (ENSEASG00005030573)	TBXA2R (ENSEASG00005022250) #7	GIPC3 (ENSEASG00005022246) #8	HMG20B (ENSEASG00005022241) #9	MFSD12 (ENSEASG00005022236) #10	TEKTIP1 (ENSEASG00005036506) #11	ENSEASG00005022196 #12	ENSEASG00005022139 #13	ENSEASG00005022128 #15	ENSEASG00005028009 #14	ENSEASG00005022118 #16	NCLN (ENSEASG00005022112) #17	S1PR4 (ENSEASG00005027401) #18	GNA15 (ENSEASG00005022106) #19	GNA11 (ENSEASG00005030989) #20	TLE5 (ENSEASG00005022089) #21	TLE2 (ENSEASG00005022082) #22	ENSEASG00005036612 ##22	ENSEASG00005032268 #24	ENSEASG00005029282 #24	ENSEASG00005022064	ENSEASG00005031905 #24	ENSEASG00005022062 #24	ENSEASG00005022060	ENSEASG00005025823 #24	ENSEASG00005022057 #24	ENSEASG00005022054	ENSEASG00005037683	ZNF555 (ENSEASG00005022049)	ZNF554 (ENSEASG00005032271)	THOP1 (ENSEASG00005022042)
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Felidae	ANCESTRAL SPECIES	21	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274.b	ENSGT00910000148834	ENSGT00940000160274.a
Cat	MODERN SPECIES	1	TBXA2R (ENSFCAG00000012120) #7	ENSFCAG00000051232	GIPC3 (ENSFCAG00000007137) #8	HMG20B (ENSFCAG00000026167) #9	MFSD12 (ENSFCAG00000000883) #10	CA2H19orf71 (ENSFCAG00000000882) #11	FZR1 (ENSFCAG00000002157) #12	DOHH (ENSFCAG00000030060) #13	SMIM24 (ENSFCAG00000052509) #14	NFIC (ENSFCAG00000000880) #15	CELF5 (ENSFCAG00000007127) #16	NCLN (ENSFCAG00000029146) #17	S1PR4 (ENSFCAG00000007126) #18	GNA15 (ENSFCAG00000007124) #19	GNA11 (ENSFCAG00000044642) #20	TLE5 (ENSFCAG00000039147) #21	TLE2 (ENSFCAG00000013863) #22	TLE6 (ENSFCAG00000013862) ##22	ENSFCAG00000035220	ENSFCAG00000050649 #24	ENSFCAG00000052219 #24	ENSFCAG00000052308 #24	ENSFCAG00000048662	ENSFCAG00000032030	ZNF555 (ENSFCAG00000022276)	ZNF554 (ENSFCAG00000035295)	ENSFCAG00000049627	THOP1 (ENSFCAG00000015785)	SGTA (ENSFCAG00000015780)	SLC39A3 (ENSFCAG00000033069)	GADD45B (ENSFCAG00000013046)
Panthera	ANCESTRAL SPECIES	15	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274.b	ENSGT00910000148834	ENSGT00940000160274.a
Panthera_a	ANCESTRAL SPECIES		ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918
lion	MODERN SPECIES	97											ENSPLOG00000015991	NCLN (ENSPLOG00000016079) #17	S1PR4 (ENSPLOG00000016130) #18	GNA15 (ENSPLOG00000016151) #19	GNA11 (ENSPLOG00000016183) #20	TLE5 (ENSPLOG00000016251) #21	TLE2 (ENSPLOG00000016376) #22	ENSPLOG00000016976 ##22	ENSPLOG00000017040	ENSPLOG00000017059
leopard	MODERN SPECIES	134	TBXA2R (ENSPPRG00000006108) #7	GIPC3 (ENSPPRG00000006047) #8	HMG20B (ENSPPRG00000005631) #9	MFSD12 (ENSPPRG00000005281) #10	TEKTIP1 (ENSPPRG00000004778) #11	FZR1 (ENSPPRG00000004528) #12	DOHH (ENSPPRG00000003295) #13	SMIM44 (ENSPPRG00000003091)	SMIM24 (ENSPPRG00000002813) #14	NFIC (ENSPPRG00000002102) #15	CELF5 (ENSPPRG00000001514) #16	NCLN (ENSPPRG00000022717) #17	S1PR4 (ENSPPRG00000014630) #18	GNA15 (ENSPPRG00000023476) #19	GNA11 (ENSPPRG00000023842) #20	TLE5 (ENSPPRG00000023990) #21	TLE2 (ENSPPRG00000024121) #22	TLE6 (ENSPPRG00000019807) ##22	ENSPPRG00000016426
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Canidae	ANCESTRAL SPECIES		ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000164918	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT01030000239476	ENSGT00940000160274	ENSGT00390000014000
Dog	MODERN SPECIES	12	CACTIN (ENSCAFG00845008863)	TBXA2R (ENSCAFG00845008905) #7	ENSCAFG00845008979	GIPC3 (ENSCAFG00845009000) #8	ENSCAFG00845009058 #9	MFSD12 (ENSCAFG00845009196) #10	C20H19orf71 (ENSCAFG00845009301) #11	FZR1 (ENSCAFG00845009377) #12	DOHH (ENSCAFG00845009508) #13	SMIM24 (ENSCAFG00845009603) #14	NFIC (ENSCAFG00845009756) #15	CELF5 (ENSCAFG00845010202) #16	NCLN (ENSCAFG00845010334) #17	S1PR4 (ENSCAFG00845010367) #18	GNA15 (ENSCAFG00845010390) #19	TLE5 (ENSCAFG00845010466) #21	GNA11 (ENSCAFG00845010571) #20	TLE2 (ENSCAFG00845010748) #22	ENSCAFG00845011118 ##22	ENSCAFG00845011169	ZNF556 (ENSCAFG00845011193)	ZNF555 (ENSCAFG00845011220)	ZNF554 (ENSCAFG00845011258)	THOP1 (ENSCAFG00845011294)	SGTA (ENSCAFG00845011392)	SLC39A3 (ENSCAFG00845011490)	DIRAS1 (ENSCAFG00845011531)	GADD45B (ENSCAFG00845011680)	LMNB2 (ENSCAFG00845011756)	ENSCAFG00845011879	TMPRSS9 (ENSCAFG00845011907)
Dingo	MODERN SPECIES	112	PIP5K1C (ENSCAFG00020018324)	CACTIN (ENSCAFG00020018320)	TBXA2R (ENSCAFG00020018318) #7	GIPC3 (ENSCAFG00020018309) #8	HMG20B (ENSCAFG00020018306) #9	MFSD12 (ENSCAFG00020018303) #10	TEKTIP1 (ENSCAFG00020018300) #11	FZR1 (ENSCAFG00020018296) #12	DOHH (ENSCAFG00020018295) #13	ENSCAFG00020018292 #14	NFIC (ENSCAFG00020018281) #15	CELF5 (ENSCAFG00020018264) #16	NCLN (ENSCAFG00020018259) #17	GNA15 (ENSCAFG00020018249) #19	GNA11 (ENSCAFG00020018245) #20	TLE5 (ENSCAFG00020018242) #21	TLE2 (ENSCAFG00020018233) #22	ENSCAFG00020018228 ##22	ENSCAFG00020018225	ENSCAFG00020018224	ZNF556 (ENSCAFG00020018221)	ZNF555 (ENSCAFG00020018217)	ZNF554 (ENSCAFG00020018214)	THOP1 (ENSCAFG00020018211)	SGTA (ENSCAFG00020018207)	SLC39A3 (ENSCAFG00020018206)	DIRAS1 (ENSCAFG00020018203)	GNG7 (ENSCAFG00020018201)	GADD45B (ENSCAFG00020018199)	ENSCAFG00020018198	LMNB2 (ENSCAFG00020018194)
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274
Mustelinae	ANCESTRAL SPECIES	19	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274
Ferret	MODERN SPECIES	326	HMG20B (ENSMPUG00000003925) #9	MFSD12 (ENSMPUG00000003886) #10	FZR1 (ENSMPUG00000003874) #12	ENSMPUG00000019702	DOHH (ENSMPUG00000003868) #13	ENSMPUG00000003863 #14	ENSMPUG00000003859	NFIC (ENSMPUG00000003850) #15	CELF5 (ENSMPUG00000003723) #16	NCLN (ENSMPUG00000003713) #17	ENSMPUG00000003708	S1PR4 (ENSMPUG00000019701) #18	GNA15 (ENSMPUG00000003706) #19	GNA11 (ENSMPUG00000003649) #20	ENSMPUG00000003642	ENSMPUG00000003353 #21	TLE6 (ENSMPUG00000003319) ##22	ENSMPUG00000003317	ENSMPUG00000003309	ENSMPUG00000003303 #24
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Glires	ANCESTRAL SPECIES	25	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Rodentia	ANCESTRAL SPECIES	17	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661
Kangaroo rat	MODERN SPECIES	383	Cactin (ENSDORG00000004095)	Tbxa2r (ENSDORG00000004093) #7	Gipc3 (ENSDORG00000027124) #8	ENSDORG00000030007 #9	Mfsd12 (ENSDORG00000012597) #10	ENSDORG00000012596 #11	Fzr1 (ENSDORG00000012595) #12	ENSDORG00000024291	Smim24 (ENSDORG00000028789) #14	Nfic (ENSDORG00000002466) #15	ENSDORG00000005915	Ncln (ENSDORG00000009779) #17	S1pr4 (ENSDORG00000029034) #18	Gna15 (ENSDORG00000008491) #19	Gna11 (ENSDORG00000025425) #20	Tle5 (ENSDORG00000029584) #21	ENSDORG00000025434 #22	Thop1 (ENSDORG00000008967)	Sgta (ENSDORG00000009907)	Slc39a3 (ENSDORG00000029412)	Diras1 (ENSDORG00000006599)	Gng7 (ENSDORG00000001766)	Gadd45b (ENSDORG00000025421)	Lmnb2 (ENSDORG00000002602)	Timm13 (ENSDORG00000015661)	Tmprss9 (ENSDORG00000002599)	Sppl2b (ENSDORG00000004034)	Lsm7 (ENSDORG00000024460)	Atcay (ENSDORG00000000661)	ENSDORG00000012226	Eef2 (ENSDORG00000012229)
Myomorpha	ANCESTRAL SPECIES	27	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888
Muroidea	ANCESTRAL SPECIES	32	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237.eb #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273
Cricetinae	ANCESTRAL SPECIES	4	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000160088 #25	ENSGT00940000159237.db.a #26	ENSGT00940000153805.q.a.a.a #28
Golden Hamster	MODERN SPECIES	764	Cactin (ENSMAUG00000011643)	Tbxa2r (ENSMAUG00000015276) #7	Gipc3 (ENSMAUG00000021524) #8	Hmg20b (ENSMAUG00000020413) #9	Mfsd12 (ENSMAUG00000009940) #10	Tektip1 (ENSMAUG00000010716) #11	Fzr1 (ENSMAUG00000000921) #12	Dohh (ENSMAUG00000008351) #13	Smim24 (ENSMAUG00000002297) #14	Nfic (ENSMAUG00000018380) #15	ENSMAUG00000020336	Ncln (ENSMAUG00000015425) #17	S1pr4 (ENSMAUG00000008594) #18	Gna15 (ENSMAUG00000016578) #19	Gna11 (ENSMAUG00000004382) #20	Tle5 (ENSMAUG00000020765) #21	ENSMAUG00000013065 #22	ENSMAUG00000010830 #22	Tle6 (ENSMAUG00000010384) ##22	Sirt6 (ENSMAUG00000021546) #25	ENSMAUG00000008197 #26	ENSMAUG00000009986 #26	ENSMAUG00000011554 #28	ENSMAUG00000000940 ##30	ENSMAUG00000021079
Chinese hamster chok1gshd	MODERN SPECIES	2	Cactin (ENSCGRG00001021287)	Tbxa2r (ENSCGRG00001014446) #7	Gipc3 (ENSCGRG00001016082) #8	Hmg20b (ENSCGRG00001016795) #9	Mfsd12 (ENSCGRG00001018366) #10	Tektip1 (ENSCGRG00001012954) #11	Fzr1 (ENSCGRG00001015616) #12	DOHH (ENSCGRG00001018617) #13	Smim24 (ENSCGRG00001024709) #14	Nfic (ENSCGRG00001015960) #15	ENSCGRG00001002551	Ncln (ENSCGRG00001014212) #17	S1pr4 (ENSCGRG00001009743) #18	Gna15 (ENSCGRG00001019244) #19	Gna11 (ENSCGRG00001021073) #20	Tle5 (ENSCGRG00001011131) #21	Tle2 (ENSCGRG00001015962) #22	Tle6 (ENSCGRG00001023857) ##22	Sirt6 (ENSCGRG00001001515) #25	Ankrd24 (ENSCGRG00001010168) #26	ENSCGRG00001014612 #28	ENSCGRG00001015466	ENSCGRG00001000615	ENSCGRG00001004162	Ddx24 (ENSCGRG00001009522)	Otub2 (ENSCGRG00001012574)	Asb2 (ENSCGRG00001018202)	Fam181a (ENSCGRG00001009594)	Prima1 (ENSCGRG00001020834)	Unc79 (ENSCGRG00001017548)	Cox8c (ENSCGRG00001023352)
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237.eb #26	ENSGT00940000160050	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00390000007100	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000154737.c	ENSGT00440000034888	ENSGT00940000157273
Northern American deer mouse	MODERN SPECIES	14	Gipc3 (ENSPEMG00000014161) #8	Hmg20b (ENSPEMG00000014935) #9	Mfsd12 (ENSPEMG00000020766) #10	Tektip1 (ENSPEMG00000029958) #11	Fzr1 (ENSPEMG00000020284) #12	ENSPEMG00000014213 #13	Smim24 (ENSPEMG00000021225) #14	ENSPEMG00000028186	Nfic (ENSPEMG00000022565) #15	ENSPEMG00000030211	Celf5 (ENSPEMG00000021763) #16	Ncln (ENSPEMG00000001818) #17	S1pr4 (ENSPEMG00000007107) #18	Gna15 (ENSPEMG00000022124) #19	Gna11 (ENSPEMG00000020340) #20	Tle5 (ENSPEMG00000022384) #21	Tle2 (ENSPEMG00000023812) #22	Tle6 (ENSPEMG00000023765) ##22	ENSPEMG00000015555 #24	Sirt6 (ENSPEMG00000030025) #25	Ankrd24 (ENSPEMG00000023820) #26	ENSPEMG00000007616 ##30	ENSPEMG00000015235	ENSPEMG00000016925	ENSPEMG00000012935	ENSPEMG00000025396	Ebi3 (ENSPEMG00000017922)	Yju2 (ENSPEMG00000018282)	Shd (ENSPEMG00000009120)	ENSPEMG00000027526	Fsd1 (ENSPEMG00000020510)
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	349	Cactin (ENSMOCG00000011992)	Tbxa2r (ENSMOCG00000005701) #7	Gipc3 (ENSMOCG00000002475) #8	Hmg20b (ENSMOCG00000001874) #9	Mfsd12 (ENSMOCG00000020987) #10	Tektip1 (ENSMOCG00000017658) #11	Fzr1 (ENSMOCG00000012552) #12	Dohh (ENSMOCG00000014902) #13	Smim24 (ENSMOCG00000012959) #14	Nfic (ENSMOCG00000021133) #15	ENSMOCG00000005573	Ncln (ENSMOCG00000010643) #17	S1pr4 (ENSMOCG00000001385) #18	Gna15 (ENSMOCG00000007607) #19	Gna11 (ENSMOCG00000001264) #20	ENSMOCG00000020375 #21	Tle2 (ENSMOCG00000021122) #22	Tle6 (ENSMOCG00000021233) ##22	Sirt6 (ENSMOCG00000020031) #25	ENSMOCG00000016411	ENSMOCG00000002022 #26	ENSMOCG00000017715 #28	ENSMOCG00000012194	ENSMOCG00000006053	ENSMOCG00000007188
Prairie vole	MODERN SPECIES	140														Nap1l2 (ENSMOCG00000022693)	ENSMOCG00000010964	ENSMOCG00000022447 #21	ENSMOCG00000009590	Cdx4 (ENSMOCG00000007421)	Chic1 (ENSMOCG00000006223)	Tsx (ENSMOCG00000004307)	ENSMOCG00000001957	ENSMOCG00000001189	Slc16a2 (ENSMOCG00000016765)	ENSMOCG00000015414	Rlim (ENSMOCG00000014749)	Nexmif (ENSMOCG00000010351)	Abcb7 (ENSMOCG00000007290)	Uprt (ENSMOCG00000003157)	Zdhhc15 (ENSMOCG00000012964)	ENSMOCG00000005684
Murinae	ANCESTRAL SPECIES	25	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.b ##30	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000160763 #31	ENSGT00940000160217 #32	ENSGT01100000263494.a.a.a.a.a.d.b.c #33	ENSGT01100000263494.a.a.a.a.a.d.a.q ##36
Mus	ANCESTRAL SPECIES	15	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.b ##30	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30
Mus_A	ANCESTRAL SPECIES	11	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000173873	ENSGT00390000000987	ENSGT00940000158078	ENSGT00940000160733
Mus_B	ANCESTRAL SPECIES	10	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00700000104587	ENSGT00860000135672	ENSGT00940000173873	ENSGT00390000000987
Mouse	MODERN SPECIES	1	Gipc3 (ENSMUSG00000034872) #8	Hmg20b (ENSMUSG00000020232) #9	Mfsd12 (ENSMUSG00000034854) #10	Tektip1 (ENSMUSG00000020234) #11	Fzr1 (ENSMUSG00000020235) #12	Dohh (ENSMUSG00000078440) #13	Gm48551 (ENSMUSG00000113262)	Gm48552 (ENSMUSG00000114004)	Smim24 (ENSMUSG00000078439) #14	Nfic (ENSMUSG00000055053) #15	Celf5 (ENSMUSG00000034818) #16	Ncln (ENSMUSG00000020238) #17	S1pr4 (ENSMUSG00000044199) #18	Gna15 (ENSMUSG00000034792) #19	Gna11 (ENSMUSG00000034781) #20	Tle5 (ENSMUSG00000054452) #21	Tle2 (ENSMUSG00000034771) #22	Tle6 (ENSMUSG00000034758) ##22	BC025920 (ENSMUSG00000074862) #24	Sirt6 (ENSMUSG00000034748) #25	Ankrd24 (ENSMUSG00000054708) #26	Gm10778 (ENSMUSG00000096856) ##30	Zfp433 (ENSMUSG00000096795) #27	Gm3055 (ENSMUSG00000094622)	Gm4767 (ENSMUSG00000094076) ##30	Gm32687 (ENSMUSG00000112640) #27	Zfp781 (ENSMUSG00000096718)	Zfp873 (ENSMUSG00000061371) #28	BC024063 (ENSMUSG00000112160)	AU041133 (ENSMUSG00000078435) #29	Zfp938 (ENSMUSG00000062931) #30
Mus_C	ANCESTRAL SPECIES	7	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000160088 #25	ENSGT00940000159237 #26	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00700000104587	ENSGT00860000135672	ENSGT00390000007685	ENSGT00390000000987
Steppe mouse	MODERN SPECIES	349																Tle5 (ENSMSIG00000000883) #21
spretus	MODERN SPECIES	1	Cactin (MGP_SPRETEiJ_G0016451)	Tbxa2r (MGP_SPRETEiJ_G0016452) #7	Gipc3 (MGP_SPRETEiJ_G0016453) #8	Hmg20b (MGP_SPRETEiJ_G0016454) #9	Mfsd12 (MGP_SPRETEiJ_G0016455) #10	Tektip1 (MGP_SPRETEiJ_G0016456) #11	Fzr1 (MGP_SPRETEiJ_G0016457) #12	Dohh (MGP_SPRETEiJ_G0016458) #13	Smim24 (MGP_SPRETEiJ_G0016459) #14	Nfic (MGP_SPRETEiJ_G0016460) #15	Celf5 (MGP_SPRETEiJ_G0016461) #16	MGP_SPRETEiJ_G0016462 #17	S1pr4 (MGP_SPRETEiJ_G0016463) #18	Gna15 (MGP_SPRETEiJ_G0016464) #19	Gna11 (MGP_SPRETEiJ_G0016465) #20	Tle5 (MGP_SPRETEiJ_G0016466) #21	Tle2 (MGP_SPRETEiJ_G0016467) #22	Tle6 (MGP_SPRETEiJ_G0016468) ##22	BC025920 (MGP_SPRETEiJ_G0016469) #24	Sirt6 (MGP_SPRETEiJ_G0016470) #25	Ankrd24 (MGP_SPRETEiJ_G0016471) #26	MGP_SPRETEiJ_G0016472 ##30	MGP_SPRETEiJ_G0016473 #27	Zfp873 (MGP_SPRETEiJ_G0016474) #28	MGP_SPRETEiJ_G0016475	AU041133 (MGP_SPRETEiJ_G0016476) #29	Zfp938 (MGP_SPRETEiJ_G0016477) #30	MGP_SPRETEiJ_G0016478	Gm1553 (MGP_SPRETEiJ_G0016479)	Tdg (MGP_SPRETEiJ_G0016480)	Glt8d2 (MGP_SPRETEiJ_G0016481)
Ryukyu mouse	MODERN SPECIES	1	Cactin (MGP_CAROLIEiJ_G0015633)	Tbxa2r (MGP_CAROLIEiJ_G0015634) #7	Gipc3 (MGP_CAROLIEiJ_G0015635) #8	Hmg20b (MGP_CAROLIEiJ_G0015636) #9	Mfsd12 (MGP_CAROLIEiJ_G0015637) #10	Tektip1 (MGP_CAROLIEiJ_G0015638) #11	Fzr1 (MGP_CAROLIEiJ_G0015639) #12	MGP_CAROLIEiJ_G0015640 #13	Smim24 (MGP_CAROLIEiJ_G0015641) #14	Nfic (MGP_CAROLIEiJ_G0015642) #15	Celf5 (MGP_CAROLIEiJ_G0015643) #16	Ncln (MGP_CAROLIEiJ_G0015644) #17	S1pr4 (MGP_CAROLIEiJ_G0015645) #18	Gna15 (MGP_CAROLIEiJ_G0015646) #19	Gna11 (MGP_CAROLIEiJ_G0015647) #20	Tle5 (MGP_CAROLIEiJ_G0015648) #21	Tle2 (MGP_CAROLIEiJ_G0015649) #22	MGP_CAROLIEiJ_G0015650 #23	BC025920 (MGP_CAROLIEiJ_G0015651) #24	Sirt6 (MGP_CAROLIEiJ_G0015652) #25	Ankrd24 (MGP_CAROLIEiJ_G0015653) #26	MGP_CAROLIEiJ_G0015654 ##30	MGP_CAROLIEiJ_G0015655 #27	Zfp873 (MGP_CAROLIEiJ_G0015656) #28	MGP_CAROLIEiJ_G0015657	AU041133 (MGP_CAROLIEiJ_G0015658) #29	Zfp938 (MGP_CAROLIEiJ_G0015659) #30	MGP_CAROLIEiJ_G0015660 ##30	MGP_CAROLIEiJ_G0015661	Tdg (MGP_CAROLIEiJ_G0015662)	Glt8d2 (MGP_CAROLIEiJ_G0015663)
Shrew mouse	MODERN SPECIES	22	Cactin (MGP_PahariEiJ_G0031046)	Tbxa2r (MGP_PahariEiJ_G0031047) #7	Gipc3 (MGP_PahariEiJ_G0031048) #8	Hmg20b (MGP_PahariEiJ_G0031049) #9	Mfsd12 (MGP_PahariEiJ_G0031050) #10	Tektip1 (MGP_PahariEiJ_G0031051) #11	Fzr1 (MGP_PahariEiJ_G0031052) #12	MGP_PahariEiJ_G0031053 #13	Smim24 (MGP_PahariEiJ_G0031054) #14	Nfic (MGP_PahariEiJ_G0031055) #15	Celf5 (MGP_PahariEiJ_G0031056) #16	Ncln (MGP_PahariEiJ_G0031057) #17	S1pr4 (MGP_PahariEiJ_G0031058) #18	Gna15 (MGP_PahariEiJ_G0031059) #19	Gna11 (MGP_PahariEiJ_G0031060) #20	Tle5 (MGP_PahariEiJ_G0031061) #21	Tle2 (MGP_PahariEiJ_G0031062) #22	MGP_PahariEiJ_G0031063 #23	MGP_PahariEiJ_G0031064 #24	Sirt6 (MGP_PahariEiJ_G0031065) #25	Ankrd24 (MGP_PahariEiJ_G0031066) #26	MGP_PahariEiJ_G0031067 #27	MGP_PahariEiJ_G0031068 #28	AU041133 (MGP_PahariEiJ_G0031069) #29	MGP_PahariEiJ_G0031070 #30	Tespa1 (MGP_PahariEiJ_G0031071) #31	Neurod4 (MGP_PahariEiJ_G0031072) #32	Or9k7 (MGP_PahariEiJ_G0031073) #33	MGP_PahariEiJ_G0031074 #34	MGP_PahariEiJ_G0031075 #35	MGP_PahariEiJ_G0031076 #36
Rat	MODERN SPECIES	17	Cactin (ENSRNOG00000039852)	Tbxa2r (ENSRNOG00000020585) #7	Hmg20b (ENSRNOG00000020601) #9	Mfsd12 (ENSRNOG00000039858) #10	Tektip1 (ENSRNOG00000039861) #11	Fzr1 (ENSRNOG00000004169) #12	Dohh (ENSRNOG00000004259) #13	Smim44 (ENSRNOG00000066999)	AC094643.2 (ENSRNOG00000053040)	Nfic (ENSRNOG00000004505) #15	Celf5 (ENSRNOG00000004695) #16	Ncln (ENSRNOG00000004793) #17	S1pr4 (ENSRNOG00000005370) #18	Gna15 (ENSRNOG00000005378) #19	Gna11 (ENSRNOG00000005446) #20	Tle5 (ENSRNOG00000052025) #21	Tle2 (ENSRNOG00000005874) #22	Tle6 (ENSRNOG00000006350) ##22	Sirt6 (ENSRNOG00000006393) #25	Ankrd24 (ENSRNOG00000006759) #26	LOC100125368 (ENSRNOG00000068608) ##30	LOC100912294 (ENSRNOG00000064426) ##30	LOC100909682 (ENSRNOG00000064149) #27	LOC100912294 (ENSRNOG00000066348) #28	Znf624l (ENSRNOG00000069034)	ENSRNOG00000068241	ENSRNOG00000065149	Zfp709l1 (ENSRNOG00000066372) #29	LOC102550657 (ENSRNOG00000062931) #29	Zfp347 (ENSRNOG00000071023) #28	ENSRNOG00000067221
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Pip5k1c (ENSNGAG00000021521)	Cactin (ENSNGAG00000020699)	Tbxa2r (ENSNGAG00000023199) #7	Gipc3 (ENSNGAG00000022438) #8	Hmg20b (ENSNGAG00000022055) #9	Mfsd12 (ENSNGAG00000021286) #10	Fzr1 (ENSNGAG00000019979) #12	Dohh (ENSNGAG00000023202) #13	Smim24 (ENSNGAG00000020934) #14	Nfic (ENSNGAG00000021483) #15	ENSNGAG00000019694 #16	Ncln (ENSNGAG00000023405) #17	S1pr4 (ENSNGAG00000014520) #18	Gna15 (ENSNGAG00000022090) #19	Gna11 (ENSNGAG00000018151) #20	Tle5 (ENSNGAG00000023222) #21	ENSNGAG00000019164 #22	ENSNGAG00000009655 #22	ENSNGAG00000022046 ##22	Sirt6 (ENSNGAG00000022728) #25	ENSNGAG00000014424	ENSNGAG00000019241 #26	Ebi3 (ENSNGAG00000023241)	Yju2 (ENSNGAG00000019627)	Shd (ENSNGAG00000003012)	Fsd1 (ENSNGAG00000021877)	Stap2 (ENSNGAG00000021317)	Mpnd (ENSNGAG00000022278)	Sh3gl1 (ENSNGAG00000022192)	Chaf1a (ENSNGAG00000020900)	Ubxn6 (ENSNGAG00000020979)
Lesser Egyptian jerboa	MODERN SPECIES	55	Pip5k1c (ENSJJAG00000014211)	Cactin (ENSJJAG00000021015)	Tbxa2r (ENSJJAG00000015378) #7	Hmg20b (ENSJJAG00000014863) #9	Mfsd12 (ENSJJAG00000023170) #10	ENSJJAG00000014542 #11	Fzr1 (ENSJJAG00000007462) #12	Dohh (ENSJJAG00000023778) #13	Smim24 (ENSJJAG00000001987) #14	Nfic (ENSJJAG00000014906) #15	ENSJJAG00000006902	Ncln (ENSJJAG00000004276) #17	S1pr4 (ENSJJAG00000000603) #18	Gna15 (ENSJJAG00000013894) #19	Gna11 (ENSJJAG00000018855) #20	Tle5 (ENSJJAG00000015784) #21	ENSJJAG00000023070 #22	ENSJJAG00000012399 #22	Sirt6 (ENSJJAG00000016800) #25	ENSJJAG00000011418 #26	Ebi3 (ENSJJAG00000012268)	Yju2 (ENSJJAG00000023448)	Shd (ENSJJAG00000022632)	Fsd1 (ENSJJAG00000012326)	Stap2 (ENSJJAG00000019818)	Mpnd (ENSJJAG00000011677)	Sh3gl1 (ENSJJAG00000023551)	Chaf1a (ENSJJAG00000023703)	Ubxn6 (ENSJJAG00000019017)	Hdgfl2 (ENSJJAG00000017363)	ENSJJAG00000022653
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000160775	ENSGT00940000162148
Naked mole-rat female	MODERN SPECIES	21	ENSHGLG00000003634	ENSHGLG00000046308	ENSHGLG00000044420	ENSHGLG00000049463	ENSHGLG00000035026	ENSHGLG00000044227	ENSHGLG00000032960	ENSHGLG00000032173	ENSHGLG00000034587	ENSHGLG00000002680	ENSHGLG00000040658	ENSHGLG00000010518 #17	S1PR4 (ENSHGLG00000042045) #18	GNA15 (ENSHGLG00000033945) #19	GNA11 (ENSHGLG00000035049) #20	AES (ENSHGLG00000036417) #21	TLE2 (ENSHGLG00000013600) #22	ENSHGLG00000037855 ##22	ENSHGLG00000049208	ENSHGLG00000016167	FZR1 (ENSHGLG00000019224) #12	ENSHGLG00000014588 #10	ENSHGLG00000033274 #11	HMG20B (ENSHGLG00000015242) #9	GIPC3 (ENSHGLG00000016188) #8	TBXA2R (ENSHGLG00000012829) #7	CACTIN (ENSHGLG00000016228)	ENSHGLG00000016360	TJP3 (ENSHGLG00000014455)	APBA3 (ENSHGLG00000014560)	MRPL54 (ENSHGLG00000006157)
Hystricomorpha_a	ANCESTRAL SPECIES	15	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000160775	ENSGT00940000162148	ENSGT00940000158364
Hystricomorpha_b	ANCESTRAL SPECIES	17	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT00950000182965.b.fb	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000160775	ENSGT00940000162148
Degu	DUPLICATION
Degu	MODERN SPECIES	91	GNG7 (ENSODEG00000014141)	DIRAS1 (ENSODEG00000020412)	SLC39A3 (ENSODEG00000014274)	SGTA (ENSODEG00000014332)	THOP1 (ENSODEG00000013736)	ENSODEG00000013996	DOHH (ENSODEG00000014181) #13	ENSODEG00000015846 #14	NFIC (ENSODEG00000015267) #15	CELF5 (ENSODEG00000014460) #16	NCLN (ENSODEG00000013853) #17	S1PR4 (ENSODEG00000020319) #18	GNA15 (ENSODEG00000014085) #19	GNA11 (ENSODEG00000015009) #20	ENSODEG00000020164	ENSODEG00000014482 #21	TLE2 (ENSODEG00000014073) #22	ENSODEG00000013786	FZR1 (ENSODEG00000014514) #12	TEKTIP1 (ENSODEG00000013282) #11	MFSD12 (ENSODEG00000014260) #10	HMG20B (ENSODEG00000014653) #9	GIPC3 (ENSODEG00000013296) #8	TBXA2R (ENSODEG00000013384) #7	ENSODEG00000014734	PIP5K1C (ENSODEG00000013830)	TJP3 (ENSODEG00000013512)	APBA3 (ENSODEG00000013581)	MRPL54 (ENSODEG00000013969)	MATK (ENSODEG00000014649)	ATCAY (ENSODEG00000013730)
Degu	MODERN SPECIES	119	BCL11A (ENSODEG00000011913)	ENSODEG00000012174	PAPOLG (ENSODEG00000012424)	REL (ENSODEG00000013430)	PUS10 (ENSODEG00000011720)	ENSODEG00000012067	ENSODEG00000011830	USP34 (ENSODEG00000011790)	ENSODEG00000020015	XPO1 (ENSODEG00000012632)	ENSODEG00000011466	ENSODEG00000011239	ENSODEG00000012087	ENSODEG00000012263	ENSODEG00000011618	ENSODEG00000011341 #21	B3GNT2 (ENSODEG00000011165)	ENSODEG00000011529	EHBP1 (ENSODEG00000012259)	OTX1 (ENSODEG00000012071)	ENSODEG00000011160	ENSODEG00000011103	ENSODEG00000019821	WDPCP (ENSODEG00000011330)	MDH1 (ENSODEG00000011582)	ENSODEG00000012736	ENSODEG00000011552	VPS54 (ENSODEG00000012541)	PELI1 (ENSODEG00000011189)	ENSODEG00000011901	LGALSL (ENSODEG00000011485)
Long-tailed chinchilla	MODERN SPECIES	202	DAPK3 (ENSCLAG00000009010)	LMNB2 (ENSCLAG00000007920)	GADD45B (ENSCLAG00000008923)	GNG7 (ENSCLAG00000009115)	DIRAS1 (ENSCLAG00000017925)	SGTA (ENSCLAG00000010647)	THOP1 (ENSCLAG00000015063)	DOHH (ENSCLAG00000007817) #13	SMIM24 (ENSCLAG00000007177) #14	NFIC (ENSCLAG00000007526) #15	CELF5 (ENSCLAG00000009940) #16	NCLN (ENSCLAG00000008645) #17	S1PR4 (ENSCLAG00000017878) #18	GNA15 (ENSCLAG00000009774) #19	GNA11 (ENSCLAG00000010957) #20	TLE5 (ENSCLAG00000015307) #21	TLE2 (ENSCLAG00000007966) #22	ENSCLAG00000014106	FZR1 (ENSCLAG00000014081) #12	TEKTIP1 (ENSCLAG00000009360) #11	MFSD12 (ENSCLAG00000008160) #10	HMG20B (ENSCLAG00000012030) #9	GIPC3 (ENSCLAG00000009638) #8	TBXA2R (ENSCLAG00000010610) #7	CACTIN (ENSCLAG00000010714)	PIP5K1C (ENSCLAG00000011318)	TJP3 (ENSCLAG00000008035)	APBA3 (ENSCLAG00000010718)	MRPL54 (ENSCLAG00000007908)	MATK (ENSCLAG00000008473)	ZFR2 (ENSCLAG00000010137)
Guinea pig	MODERN SPECIES	288														ENSCPOG00000004974 #19	GNA11 (ENSCPOG00000036119) #20	TLE5 (ENSCPOG00000036640) #21	TLE2 (ENSCPOG00000004144) #22	FZR1 (ENSCPOG00000019570) #12	TEKTIP1 (ENSCPOG00000024460) #11	MFSD12 (ENSCPOG00000009074) #10	HMG20B (ENSCPOG00000010777) #9	GIPC3 (ENSCPOG00000023224) #8	TBXA2R (ENSCPOG00000031050) #7	CACTIN (ENSCPOG00000003880)	PIP5K1C (ENSCPOG00000001951)
Sciuridae	ANCESTRAL SPECIES	23	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Marmotini	ANCESTRAL SPECIES	24	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753	ENSGT00510000047872	ENSGT00940000162661
Arctic ground squirrel	MODERN SPECIES	301	TBXA2R (ENSUPAG00010008535) #7	GIPC3 (ENSUPAG00010008525) #8	HMG20B (ENSUPAG00010008513) #9	MFSD12 (ENSUPAG00010008498) #10	TEKTIP1 (ENSUPAG00010008492) #11	FZR1 (ENSUPAG00010008472) #12	DOHH (ENSUPAG00010008461) #13	SMIM44 (ENSUPAG00010008452)	ENSUPAG00010008444 #14	NFIC (ENSUPAG00010008410) #15	ENSUPAG00010008374	NCLN (ENSUPAG00010008331) #17	S1PR4 (ENSUPAG00010008324) #18	GNA15 (ENSUPAG00010008318) #19	GNA11 (ENSUPAG00010008291) #20	TLE5 (ENSUPAG00010008263) #21	TLE2 (ENSUPAG00010008216) #22	ENSUPAG00010008199 ##22	ZNF77 (ENSUPAG00010008190) #24
Squirrel	MODERN SPECIES	188	CACTIN (ENSSTOG00000001235)	TBXA2R (ENSSTOG00000028290) #7	GIPC3 (ENSSTOG00000007215) #8	HMG20B (ENSSTOG00000022314) #9	MFSD12 (ENSSTOG00000002823) #10	TEKTIP1 (ENSSTOG00000026760) #11	FZR1 (ENSSTOG00000002807) #12	DOHH (ENSSTOG00000023074) #13	SMIM24 (ENSSTOG00000030174) #14	NFIC (ENSSTOG00000024218) #15	CELF5 (ENSSTOG00000002384) #16	NCLN (ENSSTOG00000022427) #17	S1PR4 (ENSSTOG00000024766) #18	GNA15 (ENSSTOG00000021930) #19	GNA11 (ENSSTOG00000019951) #20	TLE5 (ENSSTOG00000028243) #21	TLE2 (ENSSTOG00000011134) #22	ZNF77 (ENSSTOG00000034105) #24	THOP1 (ENSSTOG00000006054)	SGTA (ENSSTOG00000013262)	SLC39A3 (ENSSTOG00000008404)	DIRAS1 (ENSSTOG00000032129)	GNG7 (ENSSTOG00000029016)	GADD45B (ENSSTOG00000027321)	LMNB2 (ENSSTOG00000027596)	TIMM13 (ENSSTOG00000019582)	TMPRSS9 (ENSSTOG00000023252)	SPPL2B (ENSSTOG00000022987)	LSM7 (ENSSTOG00000028372)	LINGO3 (ENSSTOG00000029056)	Oaz1 (ENSSTOG00000026489)
Eurasian red squirrel	MODERN SPECIES	7	CACTIN (ENSSVLG00005023836)	TBXA2R (ENSSVLG00005023817) #7	GIPC3 (ENSSVLG00005023804) #8	HMG20B (ENSSVLG00005023762) #9	MFSD12 (ENSSVLG00005023702) #10	TEKTIP1 (ENSSVLG00005023668) #11	FZR1 (ENSSVLG00005023633) #12	DOHH (ENSSVLG00005023586) #13	ENSSVLG00005023514	NFIC (ENSSVLG00005023336) #15	CELF5 (ENSSVLG00005023165) #16	NCLN (ENSSVLG00005023124) #17	S1PR4 (ENSSVLG00005023097) #18	GNA15 (ENSSVLG00005023052) #19	GNA11 (ENSSVLG00005023021) #20	TLE5 (ENSSVLG00005022954) #21	TLE2 (ENSSVLG00005022632) #22	ENSSVLG00005022518 ##22	ZNF77 (ENSSVLG00005022489) #24	ZNF556 (ENSSVLG00005022445)	THOP1 (ENSSVLG00005022285)	SGTA (ENSSVLG00005022255)	SLC39A3 (ENSSVLG00005022209)	GNG7 (ENSSVLG00005022168)	ENSSVLG00005022148	ENSSVLG00005022082	LMNB2 (ENSSVLG00005021950)	TIMM13 (ENSSVLG00005021893)	TMPRSS9 (ENSSVLG00005021697)	SPPL2B (ENSSVLG00005021399)	LSM7 (ENSSVLG00005021294)
Primates	ANCESTRAL SPECIES	18	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Hominidae	ANCESTRAL SPECIES		ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033.c #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033.c.a #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Homo/Pan group	ANCESTRAL SPECIES		ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033.c.a #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Pan	ANCESTRAL SPECIES	14	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033.c.a #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00910000148834	ENSGT00940000160274
Bonobo	MODERN SPECIES	10	CACTIN (ENSPPAG00000028205)	TBXA2R (ENSPPAG00000033099) #7	GIPC3 (ENSPPAG00000005107) #8	HMG20B (ENSPPAG00000042698) #9	MFSD12 (ENSPPAG00000040119) #10	TEKTIP1 (ENSPPAG00000035424) #11	FZR1 (ENSPPAG00000043553) #12	DOHH (ENSPPAG00000004289) #13	SMIM44 (ENSPPAG00000032436)	SMIM24 (ENSPPAG00000041504) #14	NFIC (ENSPPAG00000036536) #15	ENSPPAG00000029786	NCLN (ENSPPAG00000043465) #17	GNA15 (ENSPPAG00000041303) #19	GNA11 (ENSPPAG00000038754) #20	ENSPPAG00000007067 #21	ENSPPAG00000038446 #22	TLE6 (ENSPPAG00000029714) ##22	ZNF77 (ENSPPAG00000031195) #24	ENSPPAG00000028174	ZNF556 (ENSPPAG00000015477)	ZNF555 (ENSPPAG00000042762)	ZNF554 (ENSPPAG00000039331)	THOP1 (ENSPPAG00000032083)	SGTA (ENSPPAG00000018507)	SLC39A3 (ENSPPAG00000043276)	DIRAS1 (ENSPPAG00000003386)	GNG7 (ENSPPAG00000036740)	GADD45B (ENSPPAG00000043714)	ENSPPAG00000015281	LMNB2 (ENSPPAG00000040882)
Chimpanzee	MODERN SPECIES	10	ENSPTRG00000044813	GADD45B (ENSPTRG00000044298)	GNG7 (ENSPTRG00000043589)	DIRAS1 (ENSPTRG00000029182)	SLC39A3 (ENSPTRG00000010242)	SGTA (ENSPTRG00000010243)	THOP1 (ENSPTRG00000010244)	ZNF554 (ENSPTRG00000010245)	ZNF555 (ENSPTRG00000010246)	ZNF556 (ENSPTRG00000010247)	ZNF57 (ENSPTRG00000010248)	ZNF77 (ENSPTRG00000010249) #24	TLE6 (ENSPTRG00000010250) ##22	TLE2 (ENSPTRG00000010252) #22	ENSPTRG00000043065 #22	TLE5 (ENSPTRG00000010253) #21	GNA11 (ENSPTRG00000010254) #20	GNA15 (ENSPTRG00000010256) #19	NCLN (ENSPTRG00000010258) #17	CELF5 (ENSPTRG00000010259) #16	NFIC (ENSPTRG00000010261) #15	SMIM24 (ENSPTRG00000049658) #14	SMIM44 (ENSPTRG00000050433)	DOHH (ENSPTRG00000010263) #13	FZR1 (ENSPTRG00000010264) #12	TEKTIP1 (ENSPTRG00000010265) #11	MFSD12 (ENSPTRG00000010267) #10	HMG20B (ENSPTRG00000010268) #9	GIPC3 (ENSPTRG00000010269) #8	TBXA2R (ENSPTRG00000050832) #7	CACTIN (ENSPTRG00000010272)
Human	MODERN SPECIES	10	TBXA2R (ENSG00000006638) #7	GIPC3 (ENSG00000179855) #8	HMG20B (ENSG00000064961) #9	TEKTIP1 (ENSG00000183397) #11	MFSD12 (ENSG00000161091) #10	FZR1 (ENSG00000105325) #12	DOHH (ENSG00000129932) #13	SMIM44 (ENSG00000284638)	SMIM24 (ENSG00000095932) #14	NFIC (ENSG00000141905) #15	CELF5 (ENSG00000161082) #16	NCLN (ENSG00000125912) #17	S1PR4 (ENSG00000125910) #18	GNA15 (ENSG00000060558) #19	GNA11 (ENSG00000088256) #20	TLE5 (ENSG00000104964) #21	TLE2 (ENSG00000065717) #22	TLE6 (ENSG00000104953) ##22	ZNF77 (ENSG00000175691) #24	ZNF57 (ENSG00000171970)	ZNF556 (ENSG00000172000)	ZNF555 (ENSG00000186300)	ZNF554 (ENSG00000172006)	THOP1 (ENSG00000172009)	SGTA (ENSG00000104969)	SLC39A3 (ENSG00000141873)	ENSG00000267001	DIRAS1 (ENSG00000176490)	GNG7 (ENSG00000176533)	GADD45B (ENSG00000099860)	LMNB2 (ENSG00000176619)
Gorilla	MODERN SPECIES	10	TBXA2R (ENSGGOG00000013761) #7	GIPC3 (ENSGGOG00000027202) #8	HMG20B (ENSGGOG00000014805) #9	MFSD12 (ENSGGOG00000002205) #10	TEKTIP1 (ENSGGOG00000002202) #11	FZR1 (ENSGGOG00000002200) #12	ENSGGOG00000011214 #13	SMIM44 (ENSGGOG00000036474)	ENSGGOG00000038229	NFIC (ENSGGOG00000006557) #15	ENSGGOG00000041211	NCLN (ENSGGOG00000010398) #17	GNA15 (ENSGGOG00000003077) #19	ENSGGOG00000040253	GNA11 (ENSGGOG00000014995) #20	ENSGGOG00000010731 #21	TLE2 (ENSGGOG00000014765) #22	TLE6 (ENSGGOG00000014760) ##22	ZNF77 (ENSGGOG00000010217) #24	ZNF57 (ENSGGOG00000006285)	ZNF556 (ENSGGOG00000008748)	ENSGGOG00000001761	ZNF554 (ENSGGOG00000026098)	THOP1 (ENSGGOG00000007922)	SGTA (ENSGGOG00000007913)	SLC39A3 (ENSGGOG00000039245)	DIRAS1 (ENSGGOG00000004553)	GNG7 (ENSGGOG00000042768)	GADD45B (ENSGGOG00000028478)	ENSGGOG00000040102	LMNB2 (ENSGGOG00000003462)
Orangutan	MODERN SPECIES	10	GIPC3 (ENSPPYG00000009379) #8	HMG20B (ENSPPYG00000009378) #9	MFSD12 (ENSPPYG00000009377) #10	ENSPPYG00000034014	TEKTIP1 (ENSPPYG00000009376) #11	FZR1 (ENSPPYG00000009374) #12	DOHH (ENSPPYG00000009373) #13	SMIM44 (ENSPPYG00000009372)	ENSPPYG00000032854 #14	NFIC (ENSPPYG00000009371) #15	CELF5 (ENSPPYG00000009370) #16	NCLN (ENSPPYG00000009369) #17	S1PR4 (ENSPPYG00000009368) #18	GNA15 (ENSPPYG00000009367) #19	GNA11 (ENSPPYG00000009366) #20	ENSPPYG00000009364 #21	TLE2 (ENSPPYG00000009363) #22	TLE6 (ENSPPYG00000009362) ##22	ZNF77 (ENSPPYG00000009361) #24	ZNF556 (ENSPPYG00000039854)	ZNF555 (ENSPPYG00000009360)	ENSPPYG00000012138	ENSPPYG00000012058	ZNF554 (ENSPPYG00000039445)	THOP1 (ENSPPYG00000009359)	SGTA (ENSPPYG00000009358)	SLC39A3 (ENSPPYG00000009357)	DIRAS1 (ENSPPYG00000010579)	GNG7 (ENSPPYG00000030353)	ENSPPYG00000009354	LMNB2 (ENSPPYG00000009353)
Gibbon	MODERN SPECIES	7	ENSNLEG00000002565	TBXA2R (ENSNLEG00000002715) #7	GIPC3 (ENSNLEG00000002712) #8	ENSNLEG00000002687 #10	ENSNLEG00000033946 #11	FZR1 (ENSNLEG00000002571) #12	ENSNLEG00000029120	ENSNLEG00000030890 #13	SMIM44 (ENSNLEG00000029122)	ENSNLEG00000034914 #14	ENSNLEG00000002563 #15	ENSNLEG00000002553	NCLN (ENSNLEG00000002535) #17	GNA15 (ENSNLEG00000028276) #19	ENSNLEG00000002517 #20	ENSNLEG00000032291 #21	ENSNLEG00000002512 #22	TLE6 (ENSNLEG00000002466) ##22	ZNF77 (ENSNLEG00000002461) #24	ENSNLEG00000035301	ZNF556 (ENSNLEG00000002456)	ZNF555 (ENSNLEG00000002452)	ZNF554 (ENSNLEG00000027068)	THOP1 (ENSNLEG00000002434)	SGTA (ENSNLEG00000002311)	SLC39A3 (ENSNLEG00000029054)	DIRAS1 (ENSNLEG00000019022)	GNG7 (ENSNLEG00000033380)	LMNB2 (ENSNLEG00000002277)	ENSNLEG00000028772	ENSNLEG00000002273
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Rhinopithecus	ANCESTRAL SPECIES	5	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231
Golden snub-nosed monkey	MODERN SPECIES	1318	TBXA2R (ENSRROG00000044222) #7	GIPC3 (ENSRROG00000031972) #8	ENSRROG00000044154	HMG20B (ENSRROG00000012256) #9	MFSD12 (ENSRROG00000038465) #10	TEKTIP1 (ENSRROG00000042406) #11	FZR1 (ENSRROG00000036142) #12	DOHH (ENSRROG00000043930) #13	SMIM44 (ENSRROG00000030107)	SMIM24 (ENSRROG00000032951) #14	NFIC (ENSRROG00000044677) #15	CELF5 (ENSRROG00000032625) #16	NCLN (ENSRROG00000028611) #17	GNA15 (ENSRROG00000035571) #19	GNA11 (ENSRROG00000032415) #20	TLE5 (ENSRROG00000038789) #21	TLE2 (ENSRROG00000033121) #22	TLE6 (ENSRROG00000018085) ##22	ZNF77 (ENSRROG00000028828) #24	ZNF57 (ENSRROG00000030059)	ZNF556 (ENSRROG00000007558)	ZNF555 (ENSRROG00000043176)	ZNF554 (ENSRROG00000039041)	THOP1 (ENSRROG00000031016)	SGTA (ENSRROG00000018224)	SLC39A3 (ENSRROG00000028677)
Black snub-nosed monkey	MODERN SPECIES	1375	CACTIN (ENSRBIG00000006919)	TBXA2R (ENSRBIG00000036411) #7	GIPC3 (ENSRBIG00000038552) #8	HMG20B (ENSRBIG00000041734) #9	MFSD12 (ENSRBIG00000017416) #10	TEKTIP1 (ENSRBIG00000028614) #11	FZR1 (ENSRBIG00000040539) #12	DOHH (ENSRBIG00000039236) #13	SMIM44 (ENSRBIG00000033666)	SMIM24 (ENSRBIG00000033962) #14	NFIC (ENSRBIG00000040502) #15	ENSRBIG00000038502	NCLN (ENSRBIG00000040050) #17	GNA15 (ENSRBIG00000036769) #19	GNA11 (ENSRBIG00000020274) #20	TLE5 (ENSRBIG00000001610) #21	TLE2 (ENSRBIG00000028459) #22	TLE6 (ENSRBIG00000039750) ##22	ZNF77 (ENSRBIG00000029867) #24	ZNF57 (ENSRBIG00000044805)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Macaca	ANCESTRAL SPECIES	24	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b.a.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993.s.b
Pig-tailed macaque	MODERN SPECIES	76	TBXA2R (ENSMNEG00000029210) #7	GIPC3 (ENSMNEG00000033247) #8	HMG20B (ENSMNEG00000037721) #9	MFSD12 (ENSMNEG00000036659) #10	TEKTIP1 (ENSMNEG00000031534) #11	FZR1 (ENSMNEG00000028728) #12	DOHH (ENSMNEG00000040585) #13	SMIM44 (ENSMNEG00000032843)	SMIM24 (ENSMNEG00000038502) #14	NFIC (ENSMNEG00000042199) #15	ENSMNEG00000001853	NCLN (ENSMNEG00000036405) #17	S1PR4 (ENSMNEG00000020638) #18	GNA15 (ENSMNEG00000041090) #19	GNA11 (ENSMNEG00000045417) #20	TLE5 (ENSMNEG00000013087) #21	TLE2 (ENSMNEG00000036907) #22	TLE6 (ENSMNEG00000032520) ##22	ZNF77 (ENSMNEG00000039599) #24	ZNF555 (ENSMNEG00000031744)	ZNF554 (ENSMNEG00000035698)	THOP1 (ENSMNEG00000026622)	SGTA (ENSMNEG00000027965)	SLC39A3 (ENSMNEG00000028479)	ENSMNEG00000041965	DIRAS1 (ENSMNEG00000016474)	GNG7 (ENSMNEG00000028385)	GADD45B (ENSMNEG00000038733)	LMNB2 (ENSMNEG00000043540)	TIMM13 (ENSMNEG00000041650)	TMPRSS9 (ENSMNEG00000035963)
Macaca_a	ANCESTRAL SPECIES	1	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT01100000263497.E.a.b	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.a.b.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00940000159993.t	ENSGT00940000159993.s.b
Crab-eating macaque	MODERN SPECIES	10	ENSMFAG00000052942	ENSMFAG00000040276	ATCAY (ENSMFAG00000002982)	ZFR2 (ENSMFAG00000031215)	RAX2 (ENSMFAG00000065615)	MATK (ENSMFAG00000030470)	MRPL54 (ENSMFAG00000003311)	APBA3 (ENSMFAG00000044015)	MFSD12 (ENSMFAG00000039649) #10	TEKTIP1 (ENSMFAG00000036699) #11	FZR1 (ENSMFAG00000003458) #12	SMIM24 (ENSMFAG00000037612) #14	NFIC (ENSMFAG00000000744) #15	ENSMFAG00000050957	ENSMFAG00000031277	TLE5 (ENSMFAG00000057458) #21	TLE2 (ENSMFAG00000033930) #22	TLE6 (ENSMFAG00000003537) ##22	ZNF77 (ENSMFAG00000045401) #24	ZNF556 (ENSMFAG00000039163)	ZNF555 (ENSMFAG00000044275)	ZNF554 (ENSMFAG00000045795)	THOP1 (ENSMFAG00000036742)	SGTA (ENSMFAG00000034409)	ENSMFAG00000058005	ENSMFAG00000065748	GADD45B (ENSMFAG00000042254)	LMNB2 (ENSMFAG00000044219)	ENSMFAG00000038356	ENSMFAG00000061899	SPPL2B (ENSMFAG00000039923)
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00910000148398	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00910000148398	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00910000147504	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00910000148188	ENSGT00940000160231	ENSGT00940000159915	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Sooty mangabey	MODERN SPECIES	177	TBXA2R (ENSCATG00000037254) #7	GIPC3 (ENSCATG00000041662) #8	HMG20B (ENSCATG00000034700) #9	MFSD12 (ENSCATG00000045111) #10	TEKTIP1 (ENSCATG00000044766) #11	FZR1 (ENSCATG00000044993) #12	DOHH (ENSCATG00000033001) #13	SMIM44 (ENSCATG00000030734)	SMIM24 (ENSCATG00000037417) #14	NFIC (ENSCATG00000037966) #15	ENSCATG00000044494	NCLN (ENSCATG00000044668) #17	S1PR4 (ENSCATG00000017923) #18	GNA15 (ENSCATG00000044954) #19	GNA11 (ENSCATG00000038504) #20	TLE5 (ENSCATG00000040517) #21	TLE2 (ENSCATG00000035147) #22	TLE6 (ENSCATG00000041256) ##22	ZNF77 (ENSCATG00000039733) #24	ZNF556 (ENSCATG00000039430)	ZNF555 (ENSCATG00000041704)	ZNF554 (ENSCATG00000044721)	THOP1 (ENSCATG00000015509)	SGTA (ENSCATG00000033872)	ENSCATG00000006442	SLC39A3 (ENSCATG00000031717)	DIRAS1 (ENSCATG00000018575)	ENSCATG00000036453	GADD45B (ENSCATG00000039400)	LMNB2 (ENSCATG00000033476)	TIMM13 (ENSCATG00000011673)
Drill	MODERN SPECIES	1534	GIPC3 (ENSMLEG00000025100) #8	ENSMLEG00000035384	MFSD12 (ENSMLEG00000040700) #10	ENSMLEG00000030548	TEKTIP1 (ENSMLEG00000038754) #11	FZR1 (ENSMLEG00000042148) #12	DOHH (ENSMLEG00000037533) #13	SMIM44 (ENSMLEG00000031138)	SMIM24 (ENSMLEG00000030699) #14	NFIC (ENSMLEG00000039794) #15	ENSMLEG00000000058	NCLN (ENSMLEG00000041935) #17	S1PR4 (ENSMLEG00000020497) #18	GNA15 (ENSMLEG00000033896) #19	GNA11 (ENSMLEG00000004955) #20	TLE5 (ENSMLEG00000038877) #21	TLE2 (ENSMLEG00000008863) #22	TLE6 (ENSMLEG00000000586) ##22
Olive baboon	MODERN SPECIES	12	GNG7 (ENSPANG00000011892)	ENSPANG00000046797	DIRAS1 (ENSPANG00000019430)	SLC39A3 (ENSPANG00000012108)	SGTA (ENSPANG00000006535)	THOP1 (ENSPANG00000018866)	ZNF554 (ENSPANG00000030445)	ZNF555 (ENSPANG00000038361)	ZNF556 (ENSPANG00000010009)	ZNF57 (ENSPANG00000019079)	ZNF77 (ENSPANG00000020667) #24	NCLN (ENSPANG00000009308) #17	S1PR4 (ENSPANG00000020422) #18	GNA15 (ENSPANG00000002676) #19	GNA11 (ENSPANG00000011891) #20	TLE5 (ENSPANG00000016061) #21	ENSPANG00000047059 #22	ENSPANG00000012740 #22	TLE6 (ENSPANG00000014013) ##22	CACTIN (ENSPANG00000019259)	TBXA2R (ENSPANG00000018961) #7	GIPC3 (ENSPANG00000038587) #8	ENSPANG00000010575	TEKTIP1 (ENSPANG00000019078) #11	FZR1 (ENSPANG00000004724) #12	DOHH (ENSPANG00000032446) #13	SMIM44 (ENSPANG00000029842)	NFIC (ENSPANG00000004923) #15	TJP3 (ENSPANG00000013784)	APBA3 (ENSPANG00000003568)	MRPL54 (ENSPANG00000033944)
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00390000003420.b #8	ENSGT00940000161213.u.b #9	ENSGT00940000161213.u.a #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Cebidae	ANCESTRAL SPECIES	20	ENSGT00390000003420.b #8	ENSGT00940000161213.u.b #9	ENSGT00940000161213.u.a #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993	ENSGT00940000158753
Marmoset	MODERN SPECIES	14	PIP5K1C (ENSCJAG00000014951)	CACTIN (ENSCJAG00000014929)	TBXA2R (ENSCJAG00000014921) #7	GIPC3 (ENSCJAG00000014904) #8	ENSCJAG00000003488 #9	MFSD12 (ENSCJAG00000014897) #10	TEKTIP1 (ENSCJAG00000014896) #11	FZR1 (ENSCJAG00000014877) #12	DOHH (ENSCJAG00000014871) #13	SMIM44 (ENSCJAG00000039325)	SMIM24 (ENSCJAG00000069968) #14	ENSCJAG00000080745	CELF5 (ENSCJAG00000039430) #16	GNA15 (ENSCJAG00000040313) #19	GNA11 (ENSCJAG00000016160) #20	ENSCJAG00000016149 #21	TLE2 (ENSCJAG00000018666) #22	TLE6 (ENSCJAG00000018653) ##22	ENSCJAG00000073229	ZNF77 (ENSCJAG00000003471) #24	ZNF555 (ENSCJAG00000067047)	ZNF554 (ENSCJAG00000068037)	THOP1 (ENSCJAG00000084222)	SGTA (ENSCJAG00000003539)	SLC39A3 (ENSCJAG00000057869)	DIRAS1 (ENSCJAG00000023307)	GNG7 (ENSCJAG00000071869)	GADD45B (ENSCJAG00000013616)	ENSCJAG00000087139	LMNB2 (ENSCJAG00000013578)	TIMM13 (ENSCJAG00000013577)
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213.u.a #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Capuchin	MODERN SPECIES	375	GIPC3 (ENSCCAG00000035399) #8	HMG20B (ENSCCAG00000020130) #9	MFSD12 (ENSCCAG00000021716) #10	C19orf71 (ENSCCAG00000028895) #11	FZR1 (ENSCCAG00000031294) #12	ENSCCAG00000025603	DOHH (ENSCCAG00000018512) #13	SMIM44 (ENSCCAG00000024174)	SMIM24 (ENSCCAG00000032618) #14	NFIC (ENSCCAG00000035238) #15	ENSCCAG00000028950 #16	NCLN (ENSCCAG00000034927) #17	S1PR4 (ENSCCAG00000019353) #18	GNA15 (ENSCCAG00000028488) #19	GNA11 (ENSCCAG00000022709) #20	TLE5 (ENSCCAG00000037181) #21	TLE2 (ENSCCAG00000031140) #22	TLE6 (ENSCCAG00000035104) ##22	ZNF77 (ENSCCAG00000017871) #24	ZNF57 (ENSCCAG00000026905)	ZNF556 (ENSCCAG00000003367)	ZNF554 (ENSCCAG00000031592)	THOP1 (ENSCCAG00000011844)	SGTA (ENSCCAG00000023345)	SLC39A3 (ENSCCAG00000022362)	DIRAS1 (ENSCCAG00000015194)	GNG7 (ENSCCAG00000033335)	GADD45B (ENSCCAG00000023859)	LMNB2 (ENSCCAG00000000201)	TIMM13 (ENSCCAG00000029801)	TMPRSS9 (ENSCCAG00000025141)
Bolivian squirrel monkey	MODERN SPECIES	150	CACTIN (ENSSBOG00000034076)	GIPC3 (ENSSBOG00000021391) #8	HMG20B (ENSSBOG00000034086) #9	MFSD12 (ENSSBOG00000022502) #10	TEKTIP1 (ENSSBOG00000020851) #11	FZR1 (ENSSBOG00000023681) #12	DOHH (ENSSBOG00000021498) #13	SMIM44 (ENSSBOG00000025422)	SMIM24 (ENSSBOG00000019949) #14	NFIC (ENSSBOG00000031869) #15	ENSSBOG00000036241 #16	NCLN (ENSSBOG00000027521) #17	GNA15 (ENSSBOG00000031168) #19	GNA11 (ENSSBOG00000017439) #20	ENSSBOG00000011100	TLE5 (ENSSBOG00000022171) #21	TLE2 (ENSSBOG00000029407) #22	TLE6 (ENSSBOG00000034568) ##22	ZNF77 (ENSSBOG00000022293) #24	ENSSBOG00000018429	ZNF555 (ENSSBOG00000013346)	ZNF554 (ENSSBOG00000031736)	THOP1 (ENSSBOG00000035328)	SGTA (ENSSBOG00000032411)	ENSSBOG00000021127	SLC39A3 (ENSSBOG00000019952)	DIRAS1 (ENSSBOG00000032130)
Mas night monkey	MODERN SPECIES	967																TLE5 (ENSANAG00000026258) #21
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Bushbaby	MODERN SPECIES	144	PIP5K1C (ENSOGAG00000010393)	CACTIN (ENSOGAG00000010382)	TBXA2R (ENSOGAG00000026948) #7	GIPC3 (ENSOGAG00000014175) #8	HMG20B (ENSOGAG00000014171) #9	MFSD12 (ENSOGAG00000014168) #10	FZR1 (ENSOGAG00000014162) #12	DOHH (ENSOGAG00000006502) #13	SMIM24 (ENSOGAG00000027356) #14	NFIC (ENSOGAG00000026321) #15	CELF5 (ENSOGAG00000014161) #16	NCLN (ENSOGAG00000009302) #17	S1PR4 (ENSOGAG00000032004) #18	GNA15 (ENSOGAG00000026139) #19	GNA11 (ENSOGAG00000016154) #20	TLE5 (ENSOGAG00000016151) #21	TLE2 (ENSOGAG00000016146) #22	ENSOGAG00000032033 ##22	ENSOGAG00000002111	ZNF555 (ENSOGAG00000000383)	THOP1 (ENSOGAG00000000375)	SGTA (ENSOGAG00000000374)	SLC39A3 (ENSOGAG00000025858)	DIRAS1 (ENSOGAG00000000372)	GNG7 (ENSOGAG00000027288)	GADD45B (ENSOGAG00000000367)	LMNB2 (ENSOGAG00000000365)	TIMM13 (ENSOGAG00000013643)	TMPRSS9 (ENSOGAG00000013627)	SPPL2B (ENSOGAG00000000145)	ENSOGAG00000000144
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000	ENSGT00940000159993
Mouse lemur	DUPLICATION
Mouse lemur	MODERN SPECIES	16	CACTIN (ENSMICG00000008291)	TBXA2R (ENSMICG00000031426) #7	GIPC3 (ENSMICG00000012665) #8	HMG20B (ENSMICG00000028142) #9	MFSD12 (ENSMICG00000026672) #10	TEKTIP1 (ENSMICG00000043061) #11	FZR1 (ENSMICG00000015945) #12	DOHH (ENSMICG00000044244) #13	SMIM44 (ENSMICG00000044026)	SMIM24 (ENSMICG00000043267) #14	NFIC (ENSMICG00000006236) #15	CELF5 (ENSMICG00000003506) #16	NCLN (ENSMICG00000007457) #17	GNA15 (ENSMICG00000002977) #19	GNA11 (ENSMICG00000032000) #20	ENSMICG00000027776 #21	TLE2 (ENSMICG00000003029) #22	TLE6 (ENSMICG00000003016) ##22	ZNF77 (ENSMICG00000044639) #24	ZNF556 (ENSMICG00000043985)	ZNF555 (ENSMICG00000001516)	ZNF554 (ENSMICG00000030632)	THOP1 (ENSMICG00000031728)	SGTA (ENSMICG00000013433)	SLC39A3 (ENSMICG00000031825)	DIRAS1 (ENSMICG00000013418)	GNG7 (ENSMICG00000045234)	GADD45B (ENSMICG00000031371)	LMNB2 (ENSMICG00000010043)	TIMM13 (ENSMICG00000026616)	TMPRSS9 (ENSMICG00000010010)
Mouse lemur	MODERN SPECIES		STAC (ENSMICG00000048960)	DCLK3 (ENSMICG00000049233)	TRANK1 (ENSMICG00000048569)	MLH1 (ENSMICG00000049403)	LRRFIP2 (ENSMICG00000048972)	GOLGA4 (ENSMICG00000049427)	ENSMICG00000049198	ITGA9 (ENSMICG00000048957)	CTDSPL (ENSMICG00000049342)	VILL (ENSMICG00000049059)	PLCD1 (ENSMICG00000049360)	DLEC1 (ENSMICG00000048479)	ACAA1 (ENSMICG00000049114)	MYD88 (ENSMICG00000048892)	OXSR1 (ENSMICG00000049561)	ENSMICG00000049195 #21	ENSMICG00000048979	XYLB (ENSMICG00000049532)	ACVR2B (ENSMICG00000049276)	EXOG (ENSMICG00000049024)	ENSMICG00000048864	SCN5A (ENSMICG00000049061)	SCN10A (ENSMICG00000048891)	SCN11A (ENSMICG00000049555)	ENSMICG00000048876	ENSMICG00000048955	GORASP1 (ENSMICG00000049376)	TTC21A (ENSMICG00000049173)	CSRNP1 (ENSMICG00000048986)	XIRP1 (ENSMICG00000049415)	CX3CR1 (ENSMICG00000049523)
Lemuriformes_a	DUPLICATION
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a.g #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a	ENSGT00940000159258	ENSGT00940000160036	ENSGT00940000160384	ENSGT00390000001201	ENSGT00940000163572
Coquerels sifaka	MODERN SPECIES	348	DIRAS1 (ENSPCOG00000001011)	SLC39A3 (ENSPCOG00000019953)	SGTA (ENSPCOG00000022419)	THOP1 (ENSPCOG00000025936)	ZNF554 (ENSPCOG00000002531)	ZNF555 (ENSPCOG00000022329)	ENSPCOG00000020343	ZNF57 (ENSPCOG00000018829)	ZNF77 (ENSPCOG00000024746) #24	SMIM44 (ENSPCOG00000024749)	NFIC (ENSPCOG00000027301) #15	CELF5 (ENSPCOG00000011528) #16	NCLN (ENSPCOG00000024560) #17	GNA15 (ENSPCOG00000013834) #19	GNA11 (ENSPCOG00000024506) #20	ENSPCOG00000017438 #21	TLE2 (ENSPCOG00000028201) #22	TLE6 (ENSPCOG00000027942) ##22	DOHH (ENSPCOG00000002793) #13	FZR1 (ENSPCOG00000020160) #12	TEKTIP1 (ENSPCOG00000017742) #11	MFSD12 (ENSPCOG00000023032) #10	HMG20B (ENSPCOG00000013810) #9	GIPC3 (ENSPCOG00000000061) #8	TBXA2R (ENSPCOG00000015698) #7	CACTIN (ENSPCOG00000015989)	PIP5K1C (ENSPCOG00000021588)	TJP3 (ENSPCOG00000020238)	APBA3 (ENSPCOG00000026721)	MRPL54 (ENSPCOG00000027550)	RAX2 (ENSPCOG00000022891)
Greater bamboo lemur	MODERN SPECIES	145															GNA11 (ENSPSMG00000022261) #20	TLE5 (ENSPSMG00000022268) #21	TLE2 (ENSPSMG00000022356) #22	ENSPSMG00000022406 ##22
Lemuriformes_a	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a.h #21
Coquerels sifaka	MODERN SPECIES	1013	ENSPCOG00000021441	SH2D1A (ENSPCOG00000017696)	TENM1 (ENSPCOG00000017310)	ENSPCOG00000020709	ENSPCOG00000008025	DCAF12L2 (ENSPCOG00000005793)	PRR32 (ENSPCOG00000024831)	PIAS1 (ENSPCOG00000011730)	CALML4 (ENSPCOG00000020593)	CLN6 (ENSPCOG00000026911)	ENSPCOG00000016679	FEM1B (ENSPCOG00000028566)	ITGA11 (ENSPCOG00000017850)	CORO2B (ENSPCOG00000018103)	ENSPCOG00000016650	ENSPCOG00000016339 #21	SPESP1 (ENSPCOG00000018248)	GLCE (ENSPCOG00000021724)	PAQR5 (ENSPCOG00000022087)	KIF23 (ENSPCOG00000023767)	ENSPCOG00000018774
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22
Elephant shark	DUPLICATION
Elephant shark	MODERN SPECIES	1549			CBARP (ENSCMIG00000007088)	atp5f1d (ENSCMIG00000007084)	cirbp (ENSCMIG00000007083)	ENSCMIG00000007080	rnf126 (ENSCMIG00000007079)	ENSCMIG00000007078	POLRMT (ENSCMIG00000007075)	ENSCMIG00000007074	bsg (ENSCMIG00000007073)	ENSCMIG00000007070	MIER2 (ENSCMIG00000007068)	plpp2b (ENSCMIG00000007066)	ENSCMIG00000007064 ##22	ENSCMIG00000007062 ##22	ENSCMIG00000007060	ENSCMIG00000007057 ##22	ENSCMIG00000007056 ##22	ENSCMIG00000007053 ##22	ENSCMIG00000007047	GNA15 (ENSCMIG00000007046) #19	C2CD4C (ENSCMIG00000007045)	ifi30 (ENSCMIG00000007043)	pik3r2 (ENSCMIG00000006897)	MAST3 (ENSCMIG00000006760)	ENSCMIG00000006728	klhl26 (ENSCMIG00000006708)	crtc1a (ENSCMIG00000006701)	ENSCMIG00000006370	upf1 (ENSCMIG00000006233)
Elephant shark	MODERN SPECIES	859																ENSCMIG00000003438 ##22
Euteleostomi	ANCESTRAL SPECIES	249									ENSGT01050000244887.A.b.a ##18	ENSGT00950000182925.C	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000154716	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480
Actinopterygii	ANCESTRAL SPECIES	43	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000172876	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.b.r.a ##22	ENSGT00940000153241.A	ENSGT00390000013287	ENSGT00500000045074	ENSGT00940000164811	ENSGT00940000161259.B	ENSGT00940000165296	ENSGT00940000162569.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161347	ENSGT00940000158510	ENSGT00940000165714	ENSGT00950000183083.a.d.b	ENSGT00940000161259.A	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348	ENSGT00390000015537	ENSGT00940000176240	ENSGT00940000171049
Neopterygii	ANCESTRAL SPECIES	16	ENSGT00940000161055	ENSGT00940000153434	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000172876	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.b.r.a ##22	ENSGT00940000153241.A	ENSGT00390000013287	ENSGT00940000165296	ENSGT00940000162569.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000161347	ENSGT00940000158510	ENSGT00940000165714	ENSGT00950000183083.a.d.b	ENSGT00940000161259.A	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348	ENSGT00390000015537	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770	ENSGT00920000149159
Spotted gar	MODERN SPECIES	657	chaf1a (ENSLOCG00000006653)	sh3gl1b (ENSLOCG00000006631)	mpnd (ENSLOCG00000006613)	fsd1 (ENSLOCG00000006601)	si:ch211-129c21.1 (ENSLOCG00000006579)	cactin (ENSLOCG00000006566)	scamp4 (ENSLOCG00000006526)	rorca (ENSLOCG00000006502)	abhd17aa (ENSLOCG00000006487)	zgc:153115 (ENSLOCG00000006468)	ap3d1 (ENSLOCG00000006451)	cdc34a (ENSLOCG00000006431)	C2CD4C (ENSLOCG00000017638)	gna15.4 (ENSLOCG00000006414)	gna11a (ENSLOCG00000006393)	chico (ENSLOCG00000006382) ##22	ENSLOCG00000006361 ##22	plpp2b (ENSLOCG00000006345)	ENSLOCG00000006325	mier2 (ENSLOCG00000006300)	ENSLOCG00000006291	s1pr3a (ENSLOCG00000017637) ##18	shda (ENSLOCG00000006271)	ENSLOCG00000006256	ANKRD24 (ENSLOCG00000006239) #26	rxfp3.2b (ENSLOCG00000017636)	creb3l3a (ENSLOCG00000006221)	eef2b (ENSLOCG00000006185)	btbd2a (ENSLOCG00000006170)	hmg20b (ENSLOCG00000006147) #9	ENSLOCG00000006087
Osteoglossocephalai	ANCESTRAL SPECIES	627															ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Osteoglossiformes	ANCESTRAL SPECIES	21	ENSGT00950000182920.b.a.a	ENSGT00940000159170.c	ENSGT00940000164939.a.a	ENSGT00940000154737.c.h	ENSGT00940000160191	ENSGT00530000063841.b.a	ENSGT00940000159440.e	ENSGT00940000166572.b	ENSGT00440000034888	ENSGT00940000157273	ENSGT00550000075067.e	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296.b	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.a ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.c	ENSGT00530000063615.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.a.a
P. kingsleyae	DUPLICATION
P. kingsleyae	MODERN SPECIES	57	rorca (ENSPKIG00000007747)	sh3gl1a (ENSPKIG00000007850)	stap2a (ENSPKIG00000007926)	FSD1 (ENSPKIG00000007991)	gprc5ba (ENSPKIG00000008051)	sema4e (ENSPKIG00000008134)	cactin (ENSPKIG00000008269)	scamp4 (ENSPKIG00000008326)	hdgfl2 (ENSPKIG00000008374)	ENSPKIG00000008413	AP3D1 (ENSPKIG00000008440)	cdc34a (ENSPKIG00000008485)	C2CD4C (ENSPKIG00000008512)	ENSPKIG00000008524	gna11b (ENSPKIG00000008559)	ENSPKIG00000008606 ##22	ENSPKIG00000008653 ##22	ENSPKIG00000008699 ##22	PLPP2 (ENSPKIG00000008764)	ENSPKIG00000008806	theg (ENSPKIG00000008849)	shda (ENSPKIG00000008906)	ENSPKIG00000008963	ENSPKIG00000008984	ebi3 (ENSPKIG00000009019)	cks2 (ENSPKIG00000009044)	odf3l2a (ENSPKIG00000009061)	crlf1a (ENSPKIG00000009089)	ENSPKIG00000009120	keap1a (ENSPKIG00000009154)	zgc:110158 (ENSPKIG00000009240)
P. kingsleyae	MODERN SPECIES	4	plin3 (ENSPKIG00000015643)	SEMA6B (ENSPKIG00000015683)	ENSPKIG00000015786	sh3gl1b (ENSPKIG00000015903)	mpnd (ENSPKIG00000016034)	stap2b (ENSPKIG00000016089)	fsd1 (ENSPKIG00000016188)	scamp4 (ENSPKIG00000016246)	chaf1a (ENSPKIG00000016297)	ubxn6 (ENSPKIG00000016379)	ap3d1 (ENSPKIG00000016498)	cdc34a (ENSPKIG00000016724)	C2CD4C (ENSPKIG00000016750)	ENSPKIG00000016761	gna11a (ENSPKIG00000016794)	ENSPKIG00000016852 ##22	tle2a (ENSPKIG00000016898) ##22	ENSPKIG00000016984 ##22	plpp2b (ENSPKIG00000017075)	mier2 (ENSPKIG00000017115)	s1pr3a (ENSPKIG00000017142) ##18	yju2 (ENSPKIG00000017199)	ENSPKIG00000017374 #26	shc2 (ENSPKIG00000017414)	odf3l2b (ENSPKIG00000017453)	ENSPKIG00000017483	ENSPKIG00000017506	ENSPKIG00000017579	rex1bd (ENSPKIG00000017606)	CRLF1 (ENSPKIG00000017622)	tmem59l (ENSPKIG00000017655)
Clupeocephala	ANCESTRAL SPECIES	125															ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a	ENSGT00940000165458	ENSGT00950000183049.C.a.b	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00390000005235
Otomorpha	DUPLICATION
Otomorpha	ANCESTRAL SPECIES	497													ENSGT00940000164811.a.b.b	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a
Clupeiformes	ANCESTRAL SPECIES	456													ENSGT00940000164811.a.b.b	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155885.b	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a
Atlantic herring	MODERN SPECIES	14	bambib (ENSCHAG00000020548)	ENSCHAG00000020554	ENSCHAG00000020567	mkxb (ENSCHAG00000020809)	rab18b (ENSCHAG00000020817)	ENSCHAG00000020870	ENSCHAG00000020882	ENSCHAG00000021013	ENSCHAG00000021197	ENSCHAG00000021344	ENSCHAG00000021355	ENSCHAG00000021379	cdc34b (ENSCHAG00000021382)	C2CD4C (ENSCHAG00000021399)	gna11b (ENSCHAG00000021406)	chico (ENSCHAG00000021477) ##22	tle2c (ENSCHAG00000021518) ##22	ENSCHAG00000021523	ENSCHAG00000021557	VANGL2 (ENSCHAG00000021571)	NCSTN (ENSCHAG00000021666)	ENSCHAG00000022936	ENSCHAG00000022937	ENSCHAG00000022948	ENSCHAG00000022956	ENSCHAG00000022963	ENSCHAG00000022968	ptrhd1 (ENSCHAG00000022979)	rab12 (ENSCHAG00000022982)	ENSCHAG00000022997	ENSCHAG00000023004
Denticle herring	MODERN SPECIES	14	ndufv2 (ENSDCDG00000034553)	acss2l (ENSDCDG00000034543)	MTCL1 (ENSDCDG00000034531)	rab12 (ENSDCDG00000034529)	NCSTN (ENSDCDG00000034268)	VANGL2 (ENSDCDG00000034224)	fcer1gl (ENSDCDG00000034222)	ENSDCDG00000034220	ENSDCDG00000034219	ENSDCDG00000034215	ENSDCDG00000034206	ENSDCDG00000034202	ENSDCDG00000034200	cdc34b (ENSDCDG00000034198)	gna11b (ENSDCDG00000034196)	tle5 (ENSDCDG00000034194) ##22	tle2c (ENSDCDG00000034192) ##22	PLPP2 (ENSDCDG00000034189)	ENSDCDG00000034187	shda (ENSDCDG00000034184)	yju2 (ENSDCDG00000034182)	ENSDCDG00000034177	ENSDCDG00000034050	KCNJ10 (ENSDCDG00000034043)	ENSDCDG00000034041	ENSDCDG00000034039	ENSDCDG00000034037	ENSDCDG00000034036	ENSDCDG00000034033	kirrel1b (ENSDCDG00000034013)	cadm3 (ENSDCDG00000033919)
Otophysi	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22
Characiphysae	ANCESTRAL SPECIES	20	ENSGT00950000182982.A.b	ENSGT00940000166845	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000160088 #25	ENSGT01030000234534.B.a.a.a.a.a.b	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a.j	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b	ENSGT00390000008279.b	ENSGT00950000183049.C.a.a
Channel catfish	MODERN SPECIES	12	ENSIPUG00000017732	ankrd12 (ENSIPUG00000017743)	ENSIPUG00000017753	twsg1a (ENSIPUG00000017789)	rnf126 (ENSIPUG00000017817)	ENSIPUG00000017853	ENSIPUG00000017898	CELF5 (ENSIPUG00000017915) #16	sirt6 (ENSIPUG00000017946) #25	ENSIPUG00000017985	ENSIPUG00000017993	RALBP1 (ENSIPUG00000018010)	RAB31 (ENSIPUG00000018050)	C2cd4cC2CD4 family (ENSIPUG00000018074)	gna11b (ENSIPUG00000018081)	ENSIPUG00000018096 ##22	tle2c (ENSIPUG00000018122) ##22	plpp2 (ENSIPUG00000018135)	ENSIPUG00000018162	theg (ENSIPUG00000018180)	SHD (ENSIPUG00000018194)	CCDC94 (ENSIPUG00000018220)	scn12aa (ENSIPUG00000018236)	ENSIPUG00000018279	ACVR2B (ENSIPUG00000018290)	ENSIPUG00000018325	PTPRM (ENSIPUG00000018362)	ENSIPUG00000018674	thfp5 (ENSIPUG00000018680)	ENSIPUG00000018688	epb41l3b (ENSIPUG00000018699)
Characiphysae_b	ANCESTRAL SPECIES	57	ENSGT00950000182982.A.b	ENSGT00940000166845	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000160088 #25	ENSGT01030000234518.B.a.a	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT01100000263681.c	ENSGT00940000154992.a.a	ENSGT00940000156210.c	ENSGT00940000159301.c.b	ENSGT01030000235169	ENSGT01030000234918.a	ENSGT00940000155020.u.b.f
Characoidei	ANCESTRAL SPECIES	45	ENSGT00950000182982.A.b	ENSGT00940000166845	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000160088 #25	ENSGT01030000234518.B.a.a	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT01100000263681.c	ENSGT00940000154992.a.a	ENSGT00940000156210.c	ENSGT00940000159301.c.b	ENSGT01030000235169	ENSGT01030000234918.a.c	ENSGT00940000155020.u.b.f
Mexicana tetra	MODERN SPECIES	8	ndufv2 (ENSAMXG00000032899)	ankrd12 (ENSAMXG00000043499)	twsg1a (ENSAMXG00000041684)	rnf126 (ENSAMXG00000042430)	ENSAMXG00000042554	ENSAMXG00000012022	ENSAMXG00000031474	CELF5 (ENSAMXG00000012028) #16	sirt6 (ENSAMXG00000042716) #25	RXFP3 (ENSAMXG00000025623)	ENSAMXG00000040794	ralbp1 (ENSAMXG00000041416)	RAB31 (ENSAMXG00000012055)	C2CD4C (ENSAMXG00000025624)	gna11b (ENSAMXG00000012068)	tle5 (ENSAMXG00000034587) ##22	tle2c (ENSAMXG00000012073) ##22	PLPP2 (ENSAMXG00000043998)	ENSAMXG00000028255	theg (ENSAMXG00000029722)	shda (ENSAMXG00000034696)	yju2 (ENSAMXG00000039999)	ENSAMXG00000041982	scn12aa (ENSAMXG00000012098)	ACVR2B (ENSAMXG00000032156)	crygn1 (ENSAMXG00000042829)	ENSAMXG00000038554	ENSAMXG00000029635	ENSAMXG00000043781	ENSAMXG00000035474	PTPRM (ENSAMXG00000012131)
Red-bellied piranha	MODERN SPECIES	48										ENSPNAG00000023493	ENSPNAG00000023540	ralbp1 (ENSPNAG00000023593)	RAB31 (ENSPNAG00000023626)	C2CD4C (ENSPNAG00000023639)	gna11b (ENSPNAG00000023687)	ENSPNAG00000023723 ##22	tle2c (ENSPNAG00000023737) ##22	PLPP2 (ENSPNAG00000023774)	ENSPNAG00000023796	theg (ENSPNAG00000023824)	shda (ENSPNAG00000023835)	yju2 (ENSPNAG00000023841)	scn12aa (ENSPNAG00000024054)	ACVR2B (ENSPNAG00000024111)	crygn1 (ENSPNAG00000024121)	ENSPNAG00000024128	ENSPNAG00000024145	ENSPNAG00000024156	ENSPNAG00000024172	PTPRM (ENSPNAG00000024266)	LRRC30 (ENSPNAG00000024271)
Electric eel	MODERN SPECIES	339		xbp1 (ENSEEEG00000008589)	ZNRF3 (ENSEEEG00000008586)	coq5 (ENSEEEG00000008534)	gnptg (ENSEEEG00000008531)	ENSEEEG00000008529	dnaaf3 (ENSEEEG00000008528)	ENSEEEG00000008206	CRHR1 (ENSEEEG00000008179)	FAM171A2 (ENSEEEG00000008178)	dcakd (ENSEEEG00000008176)	ENSEEEG00000008174	ralbp1 (ENSEEEG00000008137)	C2CD4C (ENSEEEG00000008134)	gna11b (ENSEEEG00000008115)	ENSEEEG00000008109 ##22	tle2c (ENSEEEG00000008104) ##22	PLPP2 (ENSEEEG00000008103)	shda (ENSEEEG00000008101)	yju2 (ENSEEEG00000008098)	ENSEEEG00000008097	scn12aa (ENSEEEG00000008071)	ACVR2B (ENSEEEG00000008066)	ENSEEEG00000008063	ENSEEEG00000008062	ENSEEEG00000008060
Otomorpha	ANCESTRAL SPECIES	5						ENSGT00940000165728	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b
Otophysi	ANCESTRAL SPECIES	122	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000154716.hc.a.a	ENSGT00940000160088 #25	ENSGT01030000234518.B.a.a	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000154992.a.a	ENSGT01100000263681	ENSGT00940000156210.c	ENSGT00940000159301.c.b	ENSGT01030000235169
Characiphysae	ANCESTRAL SPECIES	28	ENSGT00950000183005.b.b	ENSGT01100000264042	ENSGT00940000157036.e.a	ENSGT00940000166752	ENSGT00940000153487.b.a.s.a	ENSGT01030000234539.a.a.a.f	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.a ##22
Characiphysae_b	ANCESTRAL SPECIES	25	ENSGT00950000183005.b.b	ENSGT00390000018299.a	ENSGT00940000157036.e.a	ENSGT00940000166752	ENSGT00940000153487.b.a.s.a	ENSGT01030000234539.a.a.a.f	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22
Characoidei	ANCESTRAL SPECIES	223	ENSGT00950000183005.b.b	ENSGT01100000264042	ENSGT00940000157036.e.a	ENSGT00940000166752	ENSGT00940000153487.b.a.s.a	ENSGT01030000234539.a.a.a.f	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22
Red-bellied piranha	MODERN SPECIES	82	ENSPNAG00000017417	tcf3b (ENSPNAG00000017522)	ENSPNAG00000017546	map2k2a (ENSPNAG00000017601)	pias4a (ENSPNAG00000017645)	scamp4 (ENSPNAG00000017680)	chaf1a (ENSPNAG00000017687)	ubxn6 (ENSPNAG00000017694)	hdgfl2 (ENSPNAG00000017800)	ap3d1 (ENSPNAG00000003512)	cdc34a (ENSPNAG00000018281)	C2CD4C (ENSPNAG00000018287)	ENSPNAG00000018296	gna15.4 (ENSPNAG00000018305)	gna11a (ENSPNAG00000018340)	tle5 (ENSPNAG00000018350) ##22	ENSPNAG00000018379 ##22	tle2a (ENSPNAG00000018400) ##22	plpp2b (ENSPNAG00000018445)
Electric eel	MODERN SPECIES	956											ENSEEEG00000010121	C2CD4C (ENSEEEG00000010124)	ENSEEEG00000010126	gna15.4 (ENSEEEG00000010128)	gna11a (ENSEEEG00000010146)	tle5 (ENSEEEG00000010155) ##22	ENSEEEG00000010157 ##22
Channel catfish	MODERN SPECIES	1	unc13a (ENSIPUG00000001021)	mbd3b (ENSIPUG00000001063)	MBD3 (ENSIPUG00000001096)	tcf3b (ENSIPUG00000001114)	ENSIPUG00000001238	map2k2a (ENSIPUG00000001241)	pias4 (ENSIPUG00000001271)	scamp4 (ENSIPUG00000001316)	chaf1a (ENSIPUG00000001333)	UBXN6 (ENSIPUG00000001356)	hdgfl2 (ENSIPUG00000001382)	ap3d1 (ENSIPUG00000001409)	C2CD4C (ENSIPUG00000001665)	gna15.4 (ENSIPUG00000001668)	gna11a (ENSIPUG00000001673)	tle5 (ENSIPUG00000001688) ##22	ENSIPUG00000001703 ##22	ENSIPUG00000001716 ##22	tle2a (ENSIPUG00000001748) ##22	ENSIPUG00000001808	klc4 (ENSIPUG00000001836)	soul4 (ENSIPUG00000001884)	ptk7 (ENSIPUG00000001905)	MARK1 (ENSIPUG00000001985)	ENSIPUG00000002167	ENSIPUG00000002193	rcor3 (ENSIPUG00000002202)	kcnh1b (ENSIPUG00000002236)	ENSIPUG00000002259	ENSIPUG00000002286	ENSIPUG00000002295
Cyprinoidei	DUPLICATION
Cyprinoidei	ANCESTRAL SPECIES	17	ENSGT00940000161534	ENSGT00940000156834	ENSGT00940000158639	ENSGT00950000182975.a.a.a.a.a	ENSGT00940000165728	ENSGT00940000166572.c	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067.l	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296.c	ENSGT00940000165296.d.a	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a.c	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b	ENSGT00390000008279.b	ENSGT00950000183049.C.a.a
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	525	ENSGT00940000153391.c.b.b.a	ENSGT00940000161534.bc.b	ENSGT00940000156834.c	ENSGT00950000182975.a.a.a.a.a.b	ENSGT00940000165728.e	ENSGT00940000166572.c.a	ENSGT00440000034888.a	ENSGT00940000157273.i	ENSGT00940000153942.a.f.c	ENSGT00550000075067.l.a	ENSGT00940000164811.a.a.d	ENSGT00940000161259.B.a.d	ENSGT00940000165296.c	ENSGT00940000165296.d.a.a.b	ENSGT00940000162569.b.k.a.c	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h.e ##22	ENSGT00940000155885.b.d.b	ENSGT01030000234573.A.b.b.a.e
Goldfish	MODERN SPECIES	14	ENSCARG00000023671	ENSCARG00000023731	nr5a2 (ENSCARG00000024872)	camsap2a (ENSCARG00000025177)	si:ch211-129c21.1 (ENSCARG00000025429)	scamp4 (ENSCARG00000025653)	chaf1a (ENSCARG00000003875)	ubxn6 (ENSCARG00000004064)	hdgfl2 (ENSCARG00000004108)	ap3d1 (ENSCARG00000004164)	cdc34a (ENSCARG00000004305)	C2CD4C (ENSCARG00000004318)	gna15.1 (ENSCARG00000004325)	ENSCARG00000004351	gna11a (ENSCARG00000004376)	tle5 (ENSCARG00000004422) ##22	ENSCARG00000004477 ##22	tle2a (ENSCARG00000004899) ##22	plpp2b (ENSCARG00000005033)	mier2 (ENSCARG00000005039)	tmem59l (ENSCARG00000005048)	crlf1b (ENSCARG00000005066)	rex1bd (ENSCARG00000005076)	ENSCARG00000005091	ENSCARG00000005099	bsg (ENSCARG00000005108)	fstl3 (ENSCARG00000005122)	ENSCARG00000005140	unc13a (ENSCARG00000005178)	ENSCARG00000005398	UQCR11 (ENSCARG00000005449)
Cyprininae_a	ANCESTRAL SPECIES	180	ENSGT00940000153391.c.b.b.a	ENSGT00940000161534.bc.b	ENSGT00940000156834.c	ENSGT00950000182975.a.a.a.a.a.b	ENSGT00940000165728.e	ENSGT00940000166572.c.a	ENSGT00440000034888.a	ENSGT00940000157273.i	ENSGT00940000153942.a.f.c	ENSGT00550000075067.l.a	ENSGT00940000164811.a.a.d	ENSGT00940000161259.B.a.d	ENSGT00940000165296.c.b	ENSGT00940000165296.d.a.a.b	ENSGT00940000162569.b.k.a.c	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h.e ##22	ENSGT00940000155885.b.d.b	ENSGT01030000234573.A.b.b.a.e	ENSGT01050000244887.A.b.a.c ##18	ENSGT00940000159004.b.j	ENSGT00940000159237.ab #26	ENSGT00950000182870.a.a.a.a.i	ENSGT00950000182971.B.a.a.c	ENSGT00940000159237.`b.a.b #26	ENSGT00950000182870.a.a.a.a.h	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035.g.a	ENSGT00940000156569.a.b.b.d
Common carp reference	MODERN SPECIES	43	ddx59 (ENSCCRG00000055399)	camsap2a (ENSCCRG00000043496)	si:ch211-129c21.1 (ENSCCRG00000043487)	scamp4 (ENSCCRG00000042623)	chaf1a (ENSCCRG00000042613)	ubxn6 (ENSCCRG00000043325)	hdgfl2 (ENSCCRG00000042563)	ap3d1 (ENSCCRG00000042658)	cdc34a (ENSCCRG00000042533)	ENSCCRG00000042528	gna15.1 (ENSCCRG00000042496)	ENSCCRG00000042481	ENSCCRG00000058246	ENSCCRG00000065782	gna11a (ENSCCRG00000042299)	tle5 (ENSCCRG00000056786) ##22	ENSCCRG00000009409 ##22	tle2a (ENSCCRG00000013385) ##22	plpp2b (ENSCCRG00000068532)	mier2 (ENSCCRG00000063845)	s1pr3a (ENSCCRG00000077483) ##18	shdb (ENSCCRG00000069399)	ENSCCRG00000022369 #26	cks2 (ENSCCRG00000061597)	shc2 (ENSCCRG00000010985)	rex1bd (ENSCCRG00000013600)	crlf1b (ENSCCRG00000013604)	tmem59l (ENSCCRG00000043131)	ssbp4 (ENSCCRG00000074172)	fkbp8 (ENSCCRG00000066292)	ell (ENSCCRG00000006843)
Golden-line barbel	MODERN SPECIES	168	PTPRC (ENSSGRG00000004929)	nr5a2 (ENSSGRG00000004820)	ENSSGRG00000004813	kif14 (ENSSGRG00000004811)	camsap2a (ENSSGRG00000002904)	si:ch211-129c21.1 (ENSSGRG00000002803)	chaf1a (ENSSGRG00000002358)	ubxn6 (ENSSGRG00000002340)	ap3d1 (ENSSGRG00000000924)	cdc34a (ENSSGRG00000000900)	C2CD4C (ENSSGRG00000000897)	gna15.1 (ENSSGRG00000000896)	ENSSGRG00000000877	ENSSGRG00000000874	gna11a (ENSSGRG00000000873)	tle5 (ENSSGRG00000000868) ##22	ENSSGRG00000000866 ##22	ENSSGRG00000000865 ##22	tle2a (ENSSGRG00000000589) ##22	plpp2b (ENSSGRG00000000560)	mier2 (ENSSGRG00000000559)	s1pr3a (ENSSGRG00000000557) ##18	shdb (ENSSGRG00000000555)	ENSSGRG00000000554 #26	shc2 (ENSSGRG00000000549)	cks2 (ENSSGRG00000000545)	odf3l2b (ENSSGRG00000000544)	ENSSGRG00000000536	rex1bd (ENSSGRG00000000530)	crlf1b (ENSSGRG00000000528)	tmem59l (ENSSGRG00000000523)
Cyprininae	ANCESTRAL SPECIES	113	ENSGT00940000153391.c.b.b.b	ENSGT00940000161534.bc.a	ENSGT00940000156834.d	ENSGT00940000158639	ENSGT00950000182975.a.a.a.a.a.a	ENSGT00940000165728.f	ENSGT00940000166572.c.b	ENSGT00440000034888.b	ENSGT00940000157273.j	ENSGT00940000153942.a.f.d	ENSGT00550000075067.l.b	ENSGT00940000164811.a.a.c	ENSGT00940000161259.B.a.c	ENSGT00940000165296.d.a.a.a	ENSGT00940000162569.b.k.a.d	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.d ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h.f ##22	ENSGT00940000155885.b.d.a	ENSGT01030000234573.A.b.b.a.f	ENSGT01050000244887.A.b.a.d ##18	ENSGT00940000159004.b.i	ENSGT00940000159237.`b.a.b #26	ENSGT00950000182870.a.a.a.a.h	ENSGT00940000166035.g.b	ENSGT00390000008279.b.j	ENSGT00950000183049.C.a.a.g.a	ENSGT00940000156705.d	ENSGT00940000155914.c.a.c.a	ENSGT00390000013515.e
Goldfish	MODERN SPECIES	41	nr5a2 (ENSCARG00000063968)	ENSCARG00000064058	kif14 (ENSCARG00000064262)	ddx59 (ENSCARG00000064395)	camsap2a (ENSCARG00000064424)	si:ch211-129c21.1 (ENSCARG00000064600)	scamp4 (ENSCARG00000064662)	chaf1a (ENSCARG00000064710)	hdgfl2 (ENSCARG00000065102)	ap3d1 (ENSCARG00000065168)	cdc34a (ENSCARG00000065237)	C2CD4C (ENSCARG00000065259)	gna15.1 (ENSCARG00000065263)	ENSCARG00000065272	gna11a (ENSCARG00000065284)	tle5 (ENSCARG00000065294) ##22	ENSCARG00000065343 ##22	tle2a (ENSCARG00000065989) ##22	plpp2b (ENSCARG00000066080)	mier2 (ENSCARG00000066094)	s1pr3a (ENSCARG00000066110) ##18	shdb (ENSCARG00000066114)	shc2 (ENSCARG00000048691)	cks2 (ENSCARG00000048722)	crlf1b (ENSCARG00000048742)	tmem59l (ENSCARG00000048775)	ENSCARG00000048833	ENSCARG00000048900	ncf4 (ENSCARG00000048919)	pvalb7 (ENSCARG00000049190)	baiap2l2b (ENSCARG00000049231)
Cyprininae_a	ANCESTRAL SPECIES	40	ENSGT00940000156834.d	ENSGT00940000158639	ENSGT00950000182975.a.a.a.a.a.a	ENSGT00940000165728.f	ENSGT00940000166572.c.b	ENSGT00440000034888.b	ENSGT00940000157273.j	ENSGT00940000153942.a.f.d	ENSGT00550000075067.l.b	ENSGT00940000164811.a.a.c	ENSGT00940000161259.B.a.c	ENSGT00940000165296.c.a	ENSGT00940000165296.d.a.a.a	ENSGT00940000165296.d.a.b	ENSGT00940000162569.b.k.a.d	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.d ##22	ENSGT00990000214147	ENSGT01030000234519.e.a.a.b.b.a.b.h.f ##22	ENSGT00940000155885.b.d.a	ENSGT01030000234573.A.b.b.a.f	ENSGT01050000244887.A.b.a.d ##18	ENSGT00940000159004.b.i	ENSGT00940000166035.g.b	ENSGT00390000008279.b.j	ENSGT00950000183049.C.a.a.g.a	ENSGT00940000156705.d	ENSGT00940000155914.c.a.c.a	ENSGT00390000013515.e	ENSGT00390000006337.b	ENSGT00990000206265
Golden-line barbel	MODERN SPECIES	80	kif14 (ENSSGRG00000032729)	camsap2a (ENSSGRG00000032605)	si:ch211-129c21.1 (ENSSGRG00000032584)	scamp4 (ENSSGRG00000032581)	chaf1a (ENSSGRG00000032561)	ubxn6 (ENSSGRG00000032557)	ENSSGRG00000032556	hdgfl2 (ENSSGRG00000032554)	ap3d1 (ENSSGRG00000032511)	cdc34a (ENSSGRG00000032505)	C2CD4C (ENSSGRG00000032502)	gna15.1 (ENSSGRG00000032499)	ENSSGRG00000032497	ENSSGRG00000032494	gna11a (ENSSGRG00000032212)	tle5 (ENSSGRG00000032211) ##22	ENSSGRG00000032209 ##22	ENSSGRG00000032207	tle2a (ENSSGRG00000031261) ##22	plpp2b (ENSSGRG00000031250)	mier2 (ENSSGRG00000031249)	s1pr3a (ENSSGRG00000031248) ##18	shdb (ENSSGRG00000031247)	ENSSGRG00000031243	shc2 (ENSSGRG00000031241)	odf3l2b (ENSSGRG00000031240)	ENSSGRG00000031238	rex1bd (ENSSGRG00000031237)	tmem59l (ENSSGRG00000031235)	ssbp4 (ENSSGRG00000031232)	ENSSGRG00000031231
Common carp reference	MODERN SPECIES	5	nr5a2 (ENSCCRG00000056713)	ENSCCRG00000071821	kif14 (ENSCCRG00000031631)	camsap2a (ENSCCRG00000071877)	si:ch211-129c21.1 (ENSCCRG00000043467)	scamp4 (ENSCCRG00000069213)	chaf1a (ENSCCRG00000043451)	ubxn6 (ENSCCRG00000028102)	hdgfl2 (ENSCCRG00000043307)	ap3d1 (ENSCCRG00000076942)	cdc34a (ENSCCRG00000063108)	ENSCCRG00000075403	gna15.1 (ENSCCRG00000079350)	ENSCCRG00000042516	gna11a (ENSCCRG00000066289)	tle5 (ENSCCRG00000059065) ##22	ENSCCRG00000016739 ##22	tle2a (ENSCCRG00000013380) ##22	plpp2b (ENSCCRG00000011015)	mier2 (ENSCCRG00000012343)	s1pr3a (ENSCCRG00000057122) ##18	shdb (ENSCCRG00000011003)	ENSCCRG00000078847 #26	ENSCCRG00000010991 #26	shc2 (ENSCCRG00000069472)	ENSCCRG00000032956	odf3l2b (ENSCCRG00000061293)	tmem59l (ENSCCRG00000053493)	crlf1b (ENSCCRG00000065430)	ssbp4 (ENSCCRG00000006791)	fkbp8 (ENSCCRG00000006820)
Zebrafish	MODERN SPECIES	14	si:ch211-129c21.1 (ENSDARG00000024775)	scamp4 (ENSDARG00000010531)	chaf1a (ENSDARG00000062152)	ubxn6 (ENSDARG00000003087)	hdgfl2 (ENSDARG00000019530)	ap3d1 (ENSDARG00000071424)	cdc34a (ENSDARG00000069708)	C2CD4C (ENSDARG00000079876)	gna15.1 (ENSDARG00000016364)	ENSDARG00000056654	ENSDARG00000092948	ENSDARG00000092481	gna15.4 (ENSDARG00000071416)	ENSDARG00000116003	gna11a (ENSDARG00000010002)	tle5 (ENSDARG00000021805) ##22	ENSDARG00000008767 ##22	tle2a (ENSDARG00000042484) ##22	plpp2b (ENSDARG00000028896)	mier2 (ENSDARG00000071413)	s1pr3a (ENSDARG00000042470) ##18	shdb (ENSDARG00000062109)	ENSDARG00000062103 #26	shc2 (ENSDARG00000062080)	cks2 (ENSDARG00000071410)	odf3l2b (ENSDARG00000021432)	CPAMD8 (ENSDARG00000056530)	rex1bd (ENSDARG00000073867)	crlf1b (ENSDARG00000006368)	tmem59l (ENSDARG00000003655)	ssbp4 (ENSDARG00000056483)
Cyprinoidei	ANCESTRAL SPECIES	409																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	142	ENSGT00390000017580.b	ENSGT00940000154742.a.x	ENSGT00390000007058.e.b	ENSGT00940000157113.d.a	ENSGT00940000156523.b.d.a	ENSGT00950000182925.C.a.a.b	ENSGT00940000162487.v	ENSGT00950000183112.b.a.a.a.b	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160088.b #25	ENSGT00940000159261.d.b.a.a	ENSGT00940000154639.a.b	ENSGT00940000155702.b	ENSGT00940000161259.B.b.b	ENSGT00940000162569.b.k.b.i	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.b ##22	ENSGT00940000155885.b.c.b	ENSGT00940000155603.A.a.a.b.b	ENSGT00940000159004.a.a	ENSGT00530000063615.a.n	ENSGT00940000154992.a.a.b	ENSGT00940000156210.c.a	ENSGT00940000159301.c.b.b	ENSGT01030000235169.b	ENSGT01030000234918.b.a.b	ENSGT01030000234918.a.a.b	ENSGT01050000244939.a.a.b.a.a.a	ENSGT00390000016277.b.h	ENSGT00390000003324.fb	ENSGT00950000182977.B.b.a.c.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	11	ndufv2 (ENSCARG00000016875)	ankrd12 (ENSCARG00000016918)	twsg1a (ENSCARG00000016950)	rnf126 (ENSCARG00000016959)	ENSCARG00000016979	ENSCARG00000017015	ENSCARG00000017023	zgc:165603 (ENSCARG00000017050)	RXFP3 (ENSCARG00000017122)	ENSCARG00000017125	ralbp1 (ENSCARG00000017138)	ENSCARG00000017180	C2CD4C (ENSCARG00000017218)	gna11b (ENSCARG00000017225)	ENSCARG00000017259	chico (ENSCARG00000017262) ##22	ENSCARG00000017281	tle2c (ENSCARG00000017289) ##22	PLPP2 (ENSCARG00000017329)	ENSCARG00000017350	ENSCARG00000017370	shda (ENSCARG00000017377)	yju2 (ENSCARG00000017388)	ACVR2B (ENSCARG00000017427)	crygn1 (ENSCARG00000017657)	ENSCARG00000017684	ENSCARG00000017694	ENSCARG00000017703	TGM1 (ENSCARG00000017723)	abhd4 (ENSCARG00000017849)	dad1 (ENSCARG00000017887)
Goldfish	MODERN SPECIES	11	ENSCARG00000002753	ENSCARG00000002776	ENSCARG00000002780	ENSCARG00000002834	ENSCARG00000003059	mbnl1 (ENSCARG00000003074)	cul3a (ENSCARG00000003117)	ENSCARG00000003222	ap1s3b (ENSCARG00000003233)	scg2b (ENSCARG00000003242)	acsl3b (ENSCARG00000003253)	pax3a (ENSCARG00000003368)	ENSCARG00000003393	ENSCARG00000003401	gna11b (ENSCARG00000003413)	chico (ENSCARG00000003418) ##22	PLPP2 (ENSCARG00000003426)	tle2c (ENSCARG00000003432) ##22	efr3a (ENSCARG00000003446)	ENSCARG00000003453	KCNQ3 (ENSCARG00000003466)	ENSCARG00000003547	ENSCARG00000003568	ENSCARG00000003600	pard3ab (ENSCARG00000003637)	nrp1b (ENSCARG00000003966)	ITGB1 (ENSCARG00000004165)	ITGB1 (ENSCARG00000004851)	epc1b (ENSCARG00000004918)	KIF5B (ENSCARG00000004977)	eeig2a (ENSCARG00000005008)
Cyprininae_a	ANCESTRAL SPECIES	162	ENSGT00940000166845.e.b	ENSGT00390000017580.b	ENSGT00940000154742.a.x	ENSGT00390000007058.e.b	ENSGT00940000157113.d.a	ENSGT00940000156523.b.d.a	ENSGT00950000182925.C.a.a.b	ENSGT00940000162487.v	ENSGT00940000154201.a.a.b.d.m.b #16	ENSGT00940000160088.b #25	ENSGT00940000159261.d.b.a.a	ENSGT00940000154639.a.b	ENSGT00940000155702.b	ENSGT00940000161259.B.b.b	ENSGT00940000162569.b.k.b.i	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.b ##22	ENSGT00940000155885.b.c.b	ENSGT00940000155603.A.a.a.b.b	ENSGT00940000159004.a.a	ENSGT00530000063615.a.n	ENSGT00940000154992.a.a.b	ENSGT01100000263681.b	ENSGT00940000156210.c.a	ENSGT00940000159301.c.b.b	ENSGT01030000235169.b	ENSGT01030000234918.b.a.b	ENSGT01030000234918.a.a.b	ENSGT01050000244939.a.a.b.a.a.a
Common carp reference	MODERN SPECIES	21	ankrd12 (ENSCCRG00000008581)	twsg1a (ENSCCRG00000082597)	rnf126 (ENSCCRG00000017665)	ENSCCRG00000011622	ENSCCRG00000022356	ENSCCRG00000035908	ENSCCRG00000060440	ENSCCRG00000072717	ENSCCRG00000079643 #16	sirt6 (ENSCCRG00000033266) #25	ENSCCRG00000059564	ralbp1 (ENSCCRG00000044174)	ENSCCRG00000059469	ENSCCRG00000062892	gna11b (ENSCCRG00000054256)	chico (ENSCCRG00000054548) ##22	tle2c (ENSCCRG00000074518) ##22	ENSCCRG00000022350	ENSCCRG00000076483	shda (ENSCCRG00000046378)	yju2 (ENSCCRG00000045648)	scn12aa (ENSCCRG00000033268)	ENSCCRG00000045182	crygn1 (ENSCCRG00000033245)	ENSCCRG00000063979	ENSCCRG00000033243	ENSCCRG00000056657	ENSCCRG00000012598	abhd4 (ENSCCRG00000029455)	dad1 (ENSCCRG00000014002)	ENSCCRG00000018948
Golden-line barbel	MODERN SPECIES	637										ENSSGRG00000023502	ENSSGRG00000023504	ralbp1 (ENSSGRG00000023506)	ENSSGRG00000023669	C2CD4C (ENSSGRG00000023670)	gna11b (ENSSGRG00000023672)	chico (ENSSGRG00000023812) ##22	tle2c (ENSSGRG00000023814) ##22	PLPP2 (ENSSGRG00000023816)	shda (ENSSGRG00000023819)	yju2 (ENSSGRG00000023820)	scn12aa (ENSSGRG00000023823)	ENSSGRG00000024204	ACVR2B (ENSSGRG00000024220)	crygn1 (ENSSGRG00000024558)	ENSSGRG00000024559	ENSSGRG00000024561	ENSSGRG00000024562	ENSSGRG00000024563	ENSSGRG00000024564	abhd4 (ENSSGRG00000024565)	dad1 (ENSSGRG00000024566)
Cyprininae	ANCESTRAL SPECIES	238	ENSGT00940000166845.e.a	ENSGT00390000017580.a	ENSGT00940000154742.a.w	ENSGT00390000007058.e.a	ENSGT00940000157113.d.b	ENSGT00940000156523.b.d.b	ENSGT00950000182925.C.a.a.a.b	ENSGT00940000154716.hc.a.a.a	ENSGT00940000160088.a #25	ENSGT01030000234518.B.a.a.a	ENSGT00940000159261.d.b.a.b	ENSGT00940000154639.a.a	ENSGT00940000155702.a	ENSGT00940000161259.B.b.a	ENSGT00940000162569.b.k.b.j	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.a ##22	ENSGT00940000155885.b.c.a	ENSGT00940000155603.A.a.a.b.a	ENSGT00940000154630.a	ENSGT00940000159004.a.b	ENSGT00530000063615.a.m	ENSGT00940000154992.a.a.a	ENSGT01100000263681	ENSGT00940000156210.c.b	ENSGT00940000159301.c.b.a	ENSGT01030000235169.a	ENSGT01030000234918.b.a.a	ENSGT01030000234918.a.a.a.b	ENSGT01050000244939.a.a.b.a.a.b	ENSGT00390000016277.b.g
Goldfish	MODERN SPECIES	928						zgc:165603 (ENSCARG00000034523)	ENSCARG00000034537	sirt6 (ENSCARG00000056048) #25	RXFP3 (ENSCARG00000056609)	ENSCARG00000056613	ENSCARG00000056618	ralbp1 (ENSCARG00000056634)	ENSCARG00000056726	C2CD4C (ENSCARG00000056816)	gna11b (ENSCARG00000056829)	chico (ENSCARG00000056852) ##22	tle2c (ENSCARG00000056862) ##22	PLPP2 (ENSCARG00000056916)	ENSCARG00000056944	shda (ENSCARG00000056972)	yju2 (ENSCARG00000056991)	scn12aa (ENSCARG00000057260)	ENSCARG00000063663	ACVR2B (ENSCARG00000063686)	crygn1 (ENSCARG00000063826)	ENSCARG00000063861	ENSCARG00000063866	ENSCARG00000063877	TGM1 (ENSCARG00000063892)	TGM1 (ENSCARG00000063923)	abhd4 (ENSCARG00000063967)
Cyprininae_a	ANCESTRAL SPECIES	59	ENSGT00390000017580.a	ENSGT00940000154742.a.w	ENSGT00390000007058.e.a	ENSGT00940000157113.d.b	ENSGT00940000156523.b.d.b	ENSGT00950000182925.C.a.a.a.b	ENSGT00940000154201.a.a.b.d.m.a #16	ENSGT00940000154716.hc.a.a.a	ENSGT00940000160088.a #25	ENSGT01030000234518.B.a.a.a	ENSGT00940000159261.d.b.a.b	ENSGT00940000154639.a.a	ENSGT00940000155702.a	ENSGT00940000161259.B.b.a	ENSGT00940000162569.b.k.b.j	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.a ##22	ENSGT00940000155885.b.c.a	ENSGT00940000155603.A.a.a.b.a	ENSGT00940000154630.a	ENSGT00940000159004.a.b	ENSGT00530000063615.a.m	ENSGT00940000154992.a.a.a	ENSGT01100000263681.a	ENSGT00940000156210.c.b	ENSGT00940000159301.c.b.a	ENSGT01030000235169.a	ENSGT01030000234918.b.a.a	ENSGT01030000234918.a.a.a.b	ENSGT01050000244939.a.a.b.a.a.b	ENSGT00390000016277.b.g
Common carp reference	MODERN SPECIES	29	acss2l (ENSCCRG00000077477)	ndufv2 (ENSCCRG00000008598)	ankrd12 (ENSCCRG00000060578)	twsg1a (ENSCCRG00000019155)	rnf126 (ENSCCRG00000063550)	ENSCCRG00000007981	ENSCCRG00000057140	ENSCCRG00000057494 #16	sirt6 (ENSCCRG00000033276) #25	ENSCCRG00000071034	ENSCCRG00000059460	ralbp1 (ENSCCRG00000044000)	ENSCCRG00000068061	ENSCCRG00000068438	gna11b (ENSCCRG00000007972)	chico (ENSCCRG00000062416) ##22	tle2c (ENSCCRG00000022359) ##22	ENSCCRG00000075002	ENSCCRG00000020756	theg (ENSCCRG00000065312)	shda (ENSCCRG00000007970)	yju2 (ENSCCRG00000007964)	scn12aa (ENSCCRG00000002248)	ENSCCRG00000007962	ENSCCRG00000002054	crygn1 (ENSCCRG00000002188)	ENSCCRG00000002192	ENSCCRG00000033239	ENSCCRG00000033237	ENSCCRG00000033233	abhd4 (ENSCCRG00000013990)
Golden-line barbel	MODERN SPECIES	279									zgc:165603 (ENSSGRG00000050493)	sirt6 (ENSSGRG00000050494) #25	ENSSGRG00000050495	RALBP1 (ENSSGRG00000050497)	ENSSGRG00000050498	C2CD4C (ENSSGRG00000050503)	gna11b (ENSSGRG00000050507)	chico (ENSSGRG00000050557) ##22	tle2c (ENSSGRG00000050559) ##22	PLPP2 (ENSSGRG00000050561)	shda (ENSSGRG00000050565)	yju2 (ENSSGRG00000050568)	scn12aa (ENSSGRG00000050576)	ENSSGRG00000050578	ACVR2B (ENSSGRG00000050595)	crygn1 (ENSSGRG00000050998)	ENSSGRG00000050999	ENSSGRG00000051000	ENSSGRG00000051001	ENSSGRG00000051002	ENSSGRG00000051004	abhd4 (ENSSGRG00000051008)	dad1 (ENSSGRG00000051009)
Zebrafish	MODERN SPECIES	11	ENSDARG00000111796	ctnnbl1 (ENSDARG00000011958)	ranbp3b (ENSDARG00000069056)	ENSDARG00000115610	pnhd (ENSDARG00000039070)	admp (ENSDARG00000025372)	ENSDARG00000110341	ENSDARG00000090727 #16	zgc:165603 (ENSDARG00000098702)	ENSDARG00000070661	sirt6 (ENSDARG00000102963) #25	ENSDARG00000090903	ralbp1 (ENSDARG00000078653)	ENSDARG00000115832	gna11b (ENSDARG00000053326)	chico (ENSDARG00000019588) ##22	tle2c (ENSDARG00000067832) ##22	PLPP2 (ENSDARG00000002231)	theg (ENSDARG00000078644)	shda (ENSDARG00000094243)	yju2 (ENSDARG00000026185)	scn12aa (ENSDARG00000090724)	ACVR2B (ENSDARG00000103108)	ENSDARG00000116628	crygn1 (ENSDARG00000102129)	ENSDARG00000100184	ENSDARG00000101479	ENSDARG00000099839	ENSDARG00000102106	abhd4 (ENSDARG00000102887)	dad1 (ENSDARG00000102105)
Euteleosteomorpha	DUPLICATION
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Cichlidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Midas cichlid	MODERN SPECIES	83	ENSACIG00000004541	ENSACIG00000004544	ENSACIG00000004580	lpl (ENSACIG00000004762)	safb (ENSACIG00000006247)	malt2 (ENSACIG00000006358)	mrpl54 (ENSACIG00000006438)	fam32a (ENSACIG00000006449)	fh (ENSACIG00000006461)	hdgfl2 (ENSACIG00000006475)	ap3d1 (ENSACIG00000006507)	cdc34a (ENSACIG00000006556)	C2CD4C (ENSACIG00000006571)	gna15.4 (ENSACIG00000006582)	gna11a (ENSACIG00000006604)	ENSACIG00000006622 ##22
Percomorphaceae_C	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22
Eupercaria	ANCESTRAL SPECIES	89																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Eupecaria_A	ANCESTRAL SPECIES	95																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Eupecaria_B	ANCESTRAL SPECIES	92																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Perciformes	ANCESTRAL SPECIES	103																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Perciformes_a	ANCESTRAL SPECIES	215																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Channel bull blenny	MODERN SPECIES	18	ENSCGOG00000003174	ENSCGOG00000003035	lpl (ENSCGOG00000002862)	safb (ENSCGOG00000002844)	malt2 (ENSCGOG00000002753)	mrpl54 (ENSCGOG00000002722)	fam32a (ENSCGOG00000002682)	fh (ENSCGOG00000002673)	ENSCGOG00000002654	ENSCGOG00000002635	ap3d1 (ENSCGOG00000001818)	cdc34a (ENSCGOG00000001731)	C2CD4C (ENSCGOG00000001725)	gna15.4 (ENSCGOG00000001659)	gna11a (ENSCGOG00000001513)	ENSCGOG00000001502 ##22	ENSCGOG00000001501 ##22	ENSCGOG00000001499 ##22	plpp2b (ENSCGOG00000001497)	mier2 (ENSCGOG00000001493)	s1pr3a (ENSCGOG00000001491) ##18	shdb (ENSCGOG00000001487)	ENSCGOG00000001483 #26	ENSCGOG00000001481	shc2 (ENSCGOG00000001480)	cks2 (ENSCGOG00000001476)	odf3l2b (ENSCGOG00000001474)	ENSCGOG00000001470	ENSCGOG00000001469	ENSCGOG00000001466	foxe3 (ENSCGOG00000001463)
Euteleosteomorpha	DUPLICATION
Euteleosteomorpha	ANCESTRAL SPECIES	39	ENSGT00940000164939.a.a	ENSGT00940000154737.c.h	ENSGT00940000160191	ENSGT00530000063841.b.a	ENSGT00940000159440	ENSGT00940000165728.c	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT00950000182891.a.a.b.a.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT00950000182891.a.a.b.a.a	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	18	ENSMMDG00005012786	ENSMMDG00005012750	lpl (ENSMMDG00005012484)	safb (ENSMMDG00005012474)	malt2 (ENSMMDG00005012465)	mrpl54 (ENSMMDG00005012456)	fam32a (ENSMMDG00005012453)	hdgfl2 (ENSMMDG00005012445)	ap3d1 (ENSMMDG00005012396)	cdc34a (ENSMMDG00005012387)	C2CD4C (ENSMMDG00005012384)	gna15.4 (ENSMMDG00005012378)	gna11a (ENSMMDG00005012287)	ENSMMDG00005012281 ##22	ENSMMDG00005012279 ##22	ENSMMDG00005012276 ##22	ENSMMDG00005012274 ##22	ENSMMDG00005012272 ##22	plpp2b (ENSMMDG00005012268)	mier2 (ENSMMDG00005012265)	s1pr3a (ENSMMDG00005012263) ##18	shdb (ENSMMDG00005012259)	ENSMMDG00005012254	ENSMMDG00005012250	shc2 (ENSMMDG00005012246)	cks2 (ENSMMDG00005012243)	odf3l2b (ENSMMDG00005012241)	ENSMMDG00005012236	ENSMMDG00005012235	ENSMMDG00005012232	foxe3 (ENSMMDG00005012230)
Pinecone sodierfish	MODERN SPECIES	18	tpm4a (ENSMMDG00005013641)	ENSMMDG00005012786	ENSMMDG00005012750	lpl (ENSMMDG00005012484)	safb (ENSMMDG00005012474)	malt2 (ENSMMDG00005012465)	mrpl54 (ENSMMDG00005012456)	fam32a (ENSMMDG00005012453)	hdgfl2 (ENSMMDG00005012445)	ap3d1 (ENSMMDG00005012396)	cdc34a (ENSMMDG00005012387)	C2CD4C (ENSMMDG00005012384)	gna15.4 (ENSMMDG00005012378)	gna11a (ENSMMDG00005012287)	ENSMMDG00005012281 ##22	ENSMMDG00005012279 ##22	ENSMMDG00005012276 ##22	ENSMMDG00005012274 ##22	ENSMMDG00005012272 ##22	plpp2b (ENSMMDG00005012268)	mier2 (ENSMMDG00005012265)	s1pr3a (ENSMMDG00005012263) ##18	shdb (ENSMMDG00005012259)	ENSMMDG00005012254	ENSMMDG00005012250	shc2 (ENSMMDG00005012246)	cks2 (ENSMMDG00005012243)	odf3l2b (ENSMMDG00005012241)	ENSMMDG00005012236	ENSMMDG00005012235	ENSMMDG00005012232
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT01090000261062	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT01030000234542.b.b.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT01030000234542.b.b.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Poecilia	ANCESTRAL SPECIES	1	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Guppy	MODERN SPECIES	456	ENSPREG00000012586	ENSPREG00000012568	lpl (ENSPREG00000012534)	safb (ENSPREG00000012496)	malt2 (ENSPREG00000012440)	mrpl54 (ENSPREG00000012425)	fam32a (ENSPREG00000012381)	fh (ENSPREG00000012363)	ENSPREG00000012355	hdgfl2 (ENSPREG00000012329)	ap3d1 (ENSPREG00000012126)	ENSPREG00000012077	C2CD4C (ENSPREG00000012069)	gna15.4 (ENSPREG00000012057)	gna11a (ENSPREG00000012006)	ENSPREG00000011959 ##22	ENSPREG00000011940 ##22	ENSPREG00000011930 ##22	ENSPREG00000011877 ##22	ENSPREG00000011840 ##22	plpp2b (ENSPREG00000011817)	mier2 (ENSPREG00000011791)	s1pr3a (ENSPREG00000011777) ##18	shdb (ENSPREG00000011761)	ENSPREG00000011613 #26	shc2 (ENSPREG00000011516)	cks2 (ENSPREG00000011487)	odf3l2b (ENSPREG00000011469)	CPAMD8 (ENSPREG00000011302)	ENSPREG00000011256	ENSPREG00000011249
NAME_6	ANCESTRAL SPECIES	61	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Sailfin molly	MODERN SPECIES	718	ENSPLAG00000001582	ENSPLAG00000001592	lpl (ENSPLAG00000001604)	safb (ENSPLAG00000001614)	malt2 (ENSPLAG00000001624)	mrpl54 (ENSPLAG00000001633)	mrpl54 (ENSPLAG00000001640)	fam32a (ENSPLAG00000001650)	fh (ENSPLAG00000001654)	hdgfl2 (ENSPLAG00000001664)	ap3d1 (ENSPLAG00000001695)	cdc34a (ENSPLAG00000001716)	C2CD4C (ENSPLAG00000001721)	gna15.4 (ENSPLAG00000001731)	gna11a (ENSPLAG00000001742)	ENSPLAG00000001757 ##22	ENSPLAG00000001772 ##22
Amazon molly	MODERN SPECIES	349														ENSPFOG00000018857	gna11a (ENSPFOG00000018818)	ENSPFOG00000018806 ##22	ENSPFOG00000018764 ##22	ENSPFOG00000018701 ##22	plpp2b (ENSPFOG00000018680)	mier2 (ENSPFOG00000023378)	s1pr3a (ENSPFOG00000020797) ##18	shdb (ENSPFOG00000018674)	ENSPFOG00000018646 #26	shc2 (ENSPFOG00000018616)	cks2 (ENSPFOG00000018634)	odf3l2b (ENSPFOG00000022226)	CPAMD8 (ENSPFOG00000018563)	ENSPFOG00000018552	ENSPFOG00000018547	foxe3 (ENSPFOG00000020796)	ENSPFOG00000020795
Platyfish	MODERN SPECIES	23	ENSXMAG00000022088	ENSXMAG00000003390	ENSXMAG00000003401	lpl (ENSXMAG00000003404)	safb (ENSXMAG00000003458)	malt2 (ENSXMAG00000003477)	mrpl54 (ENSXMAG00000003500)	fam32a (ENSXMAG00000003501)	fh (ENSXMAG00000020382)	hdgfl2 (ENSXMAG00000003505)	ap3d1 (ENSXMAG00000003514)	cdc34a (ENSXMAG00000023383)	C2CD4C (ENSXMAG00000020383)	gna15.4 (ENSXMAG00000013441)	gna11a (ENSXMAG00000029699)	ENSXMAG00000013420 ##22	ENSXMAG00000026963 ##22	ENSXMAG00000022246 ##22	ENSXMAG00000013402 ##22	ENSXMAG00000013381 ##22	plpp2b (ENSXMAG00000013369)	s1pr3a (ENSXMAG00000019945) ##18	shdb (ENSXMAG00000013357)	ENSXMAG00000013329 #26	shc2 (ENSXMAG00000029548)	cks2 (ENSXMAG00000013318)	odf3l2b (ENSXMAG00000029627)	CPAMD8 (ENSXMAG00000013288)	ENSXMAG00000013286	ENSXMAG00000013281	foxe3 (ENSXMAG00000013278)
NAME_4	ANCESTRAL SPECIES	17	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000161645.a
Sheepshead minnow	MODERN SPECIES	998														gna15.4 (ENSCVAG00000009279)	gna11a (ENSCVAG00000009268)	ENSCVAG00000009211 ##22	ENSCVAG00000000258 ##22	ENSCVAG00000009179 ##22
Mummichog	MODERN SPECIES	2394	ENSFHEG00000004295	tpm4a (ENSFHEG00000004277)	ENSFHEG00000004264	ENSFHEG00000004252	lpl (ENSFHEG00000004242)	safb (ENSFHEG00000004219)	malt2 (ENSFHEG00000004207)	fam32a (ENSFHEG00000004197)	fh (ENSFHEG00000004186)	hdgfl2 (ENSFHEG00000004176)	ap3d1 (ENSFHEG00000004074)	cdc34a (ENSFHEG00000004034)	C2CD4C (ENSFHEG00000004014)	gna15.4 (ENSFHEG00000004004)	gna11a (ENSFHEG00000003991)	ENSFHEG00000003969 ##22	ENSFHEG00000003954 ##22	ENSFHEG00000003945 ##22	plpp2b (ENSFHEG00000003891)
Aplocheiloidei	ANCESTRAL SPECIES	3	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a
Turquoise killifish	MODERN SPECIES	1626	ENSNFUG00015024723	ENSNFUG00015024777	LPL (ENSNFUG00015024799)	ENSNFUG00015024818	MALT1A (ENSNFUG00015024823)	mrpl54 (ENSNFUG00015024829)	fam32a (ENSNFUG00015024832)	fh (ENSNFUG00015024834)	HDGFRP2 (ENSNFUG00015024838)	AP3D1 (ENSNFUG00015024840)	ENSNFUG00015024853	CDC34A (ENSNFUG00015024854)	C2CD4C (ENSNFUG00015024856)	gna15.4 (ENSNFUG00015024859)	gna11a (ENSNFUG00015024862)	AES (ENSNFUG00015024869) ##22	ENSNFUG00015024873	ENSNFUG00015024883 ##22	ENSNFUG00015024902	PPAP2C (ENSNFUG00015024904)	MIER2 (ENSNFUG00015024905)	ENSNFUG00015024908	S1PR3 (ENSNFUG00015024911) ##18	shdb (ENSNFUG00015024914)	ENSNFUG00015024917 #26	ENSNFUG00015024923	shc2 (ENSNFUG00015024924)	CKS2 (ENSNFUG00015024930)	odf3l2b (ENSNFUG00015024932)	CPAMD8 (ENSNFUG00015024938)	SAC3D1 (ENSNFUG00015024966)
Mangrove rivulus	MODERN SPECIES	8	tpm4a (ENSKMAG00000022304)	ENSKMAG00000022305	ENSKMAG00000022306	lpl (ENSKMAG00000022307)	safb (ENSKMAG00000022308)	malt2 (ENSKMAG00000022309)	mrpl54 (ENSKMAG00000022310)	fam32a (ENSKMAG00000022311)	ENSKMAG00000022312	hdgfl2 (ENSKMAG00000022313)	ap3d1 (ENSKMAG00000022314)	cdc34a (ENSKMAG00000022315)	C2CD4C (ENSKMAG00000000137)	gna15.4 (ENSKMAG00000000141)	gna11a (ENSKMAG00000000157)	ENSKMAG00000000235 ##22	ENSKMAG00000000288 ##22	ENSKMAG00000000306 ##22	plpp2b (ENSKMAG00000000397)	mier2 (ENSKMAG00000000456)	s1pr3a (ENSKMAG00000000474) ##18	shdb (ENSKMAG00000000478)	ENSKMAG00000000488 #26	ENSKMAG00000000594	shc2 (ENSKMAG00000000614)	cks2 (ENSKMAG00000000630)	odf3l2b (ENSKMAG00000000655)	ENSKMAG00000000665	ENSKMAG00000000724	ENSKMAG00000000734	foxe3 (ENSKMAG00000000744)
Oryzias	ANCESTRAL SPECIES	5	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.s #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a
Oryzias_b	ANCESTRAL SPECIES	15	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b.e	ENSGT00940000159237.s #26	ENSGT00940000159237.t #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Indian medaka	MODERN SPECIES	13	ENSOMEG00000009155	ENSOMEG00000009136	lpl (ENSOMEG00000009105)	safb (ENSOMEG00000009066)	malt2 (ENSOMEG00000009025)	mrpl54 (ENSOMEG00000009005)	fam32a (ENSOMEG00000008978)	fh (ENSOMEG00000008972)	ENSOMEG00000008960	hdgfl2 (ENSOMEG00000008944)	ap3d1 (ENSOMEG00000008912)	cdc34a (ENSOMEG00000008878)	C2CD4C (ENSOMEG00000000219)	gna15.4 (ENSOMEG00000008824)	gna11a (ENSOMEG00000008782)	ENSOMEG00000008713 ##22	ENSOMEG00000008661 ##22	ENSOMEG00000008567 ##22	plpp2b (ENSOMEG00000008494)	mier2 (ENSOMEG00000008460)	s1pr3a (ENSOMEG00000008439) ##18	shdb (ENSOMEG00000008405)	ENSOMEG00000008347 #26	ENSOMEG00000008329 #26	shc2 (ENSOMEG00000008276)	cks2 (ENSOMEG00000008178)	odf3l2b (ENSOMEG00000008162)	CPAMD8 (ENSOMEG00000008094)	ENSOMEG00000007868	ENSOMEG00000007849	foxe3 (ENSOMEG00000007814)
Javanese ricefish	MODERN SPECIES	18	ENSOJAG00000011419	btd (ENSOJAG00000011412)	ENSOJAG00000011386	ENSOJAG00000011377	rars1 (ENSOJAG00000011059)	WWC1 (ENSOJAG00000011008)	ENSOJAG00000010997	ENSOJAG00000010977	ENSOJAG00000010954	ENSOJAG00000010930	ap3d1 (ENSOJAG00000009157)	cdc34a (ENSOJAG00000009040)	C2CD4C (ENSOJAG00000009022)	gna15.4 (ENSOJAG00000009004)	gna11a (ENSOJAG00000008921)	ENSOJAG00000008889 ##22	ENSOJAG00000007052 ##22	ENSOJAG00000006494 ##22	plpp2b (ENSOJAG00000006428)	mier2 (ENSOJAG00000006405)	s1pr3a (ENSOJAG00000006394) ##18	ENSOJAG00000006366
Oryzias_a	ANCESTRAL SPECIES	24	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000154706.rb.a	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.s #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Chinese medaka	MODERN SPECIES	1012	ENSOSIG00000011805	RAB8A (ENSOSIG00000011798)	ENSOSIG00000011794	tpm4a (ENSOSIG00000011428)	ENSOSIG00000011414	lpl (ENSOSIG00000011410)	safb (ENSOSIG00000011404)	malt2 (ENSOSIG00000011397)	mrpl54 (ENSOSIG00000011395)	fam32a (ENSOSIG00000011394)	hdgfl2 (ENSOSIG00000011375)	cdc34a (ENSOSIG00000011363)	C2CD4C (ENSOSIG00000011360)	gna15.1 (ENSOSIG00000011357)	gna11a (ENSOSIG00000011302)	ENSOSIG00000011298 ##22	ENSOSIG00000011296 ##22
Japanese Medaka HdrR	MODERN SPECIES	18	ENSORLG00000017020	ENSORLG00000017006	lpl (ENSORLG00000016997)	ENSORLG00000026174	safb (ENSORLG00000016989)	malt2 (ENSORLG00000016971)	mrpl54 (ENSORLG00000016960)	fam32a (ENSORLG00000016957)	fh (ENSORLG00000016952)	ENSORLG00000016948	ap3d1 (ENSORLG00000016931)	cdc34a (ENSORLG00000030500)	C2CD4C (ENSORLG00000016897)	gna15.4 (ENSORLG00000026736)	gna11a (ENSORLG00000016885)	ENSORLG00000016872 ##22	ENSORLG00000016862 ##22	ENSORLG00000016856 ##22	plpp2b (ENSORLG00000016852)	mier2 (ENSORLG00000016843)	s1pr3a (ENSORLG00000016841) ##18	shdb (ENSORLG00000016840)	ENSORLG00000016833 #26	shc2 (ENSORLG00000016822)	odf3l2b (ENSORLG00000016805)	cks2 (ENSORLG00000022812)	ENSORLG00000016794	ENSORLG00000016777	ENSORLG00000029696	foxe3 (ENSORLG00000016769)	foxd2 (ENSORLG00000016766)
Ovalentaria_B	ANCESTRAL SPECIES	8	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988
Bicolor damselfish	MODERN SPECIES	1572														gna15.4 (ENSSPAG00000000832)	gna11a (ENSSPAG00000000875)	ENSSPAG00000000906 ##22	ENSSPAG00000000941 ##22
Pomacentridae_A	ANCESTRAL SPECIES	48	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Spiny chromis	MODERN SPECIES	187	ENSAPOG00000022395	ENSAPOG00000022445	lpl (ENSAPOG00000022490)	safb (ENSAPOG00000022508)	malt2 (ENSAPOG00000022621)	mrpl54 (ENSAPOG00000022643)	fam32a (ENSAPOG00000000646)	fh (ENSAPOG00000022666)	ENSAPOG00000022684	hdgfl2 (ENSAPOG00000022723)	ap3d1 (ENSAPOG00000022902)	cdc34a (ENSAPOG00000022963)	C2CD4C (ENSAPOG00000022972)	gna15.4 (ENSAPOG00000000655)	gna11a (ENSAPOG00000023049)	ENSAPOG00000023095 ##22	ENSAPOG00000023105 ##22
Amphiprion	ANCESTRAL SPECIES	70	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b.c	ENSGT00940000159004.b.d	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Orange clownfish	MODERN SPECIES	11	tpm4a (ENSAPEG00000023244)	ENSAPEG00000023296	ENSAPEG00000023317	lpl (ENSAPEG00000023328)	safb (ENSAPEG00000023342)	malt2 (ENSAPEG00000023362)	mrpl54 (ENSAPEG00000023406)	fam32a (ENSAPEG00000023419)	ENSAPEG00000023427	hdgfl2 (ENSAPEG00000023436)	ap3d1 (ENSAPEG00000023483)	cdc34a (ENSAPEG00000023541)	C2CD4C (ENSAPEG00000023553)	gna15.4 (ENSAPEG00000023578)	gna11a (ENSAPEG00000023595)	ENSAPEG00000023648 ##22	ENSAPEG00000023685 ##22	ENSAPEG00000023718 ##22	plpp2b (ENSAPEG00000023766)	mier2 (ENSAPEG00000023781)	s1pr3a (ENSAPEG00000023809) ##18	shdb (ENSAPEG00000023818)	shdb (ENSAPEG00000023820)	ENSAPEG00000023839 #26	shc2 (ENSAPEG00000023862)	cks2 (ENSAPEG00000023889)	odf3l2b (ENSAPEG00000023897)	ENSAPEG00000023914	ENSAPEG00000023938	ENSAPEG00000023944	foxe3 (ENSAPEG00000023954)
Clown anemonefish	MODERN SPECIES	3633					safb (ENSAOCG00000006308)	malt2 (ENSAOCG00000006415)	mrpl54 (ENSAOCG00000006430)	fam32a (ENSAOCG00000006441)	fh (ENSAOCG00000006448)	hdgfl2 (ENSAOCG00000006472)	ap3d1 (ENSAOCG00000006552)	cdc34a (ENSAOCG00000006603)	C2CD4C (ENSAOCG00000006614)	gna15.4 (ENSAOCG00000000322)	gna11a (ENSAOCG00000006684)	ENSAOCG00000006718 ##22
Cichlidae	ANCESTRAL SPECIES	17	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Pseudocrenilabrinae	ANCESTRAL SPECIES	10	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	26	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Haplochromini	ANCESTRAL SPECIES	16	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Haplochromini_A	ANCESTRAL SPECIES	15	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Haplochromini_B	ANCESTRAL SPECIES	10	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a
Eastern happy	MODERN SPECIES	14	ENSACLG00000002040	ENSACLG00000002017	lpl (ENSACLG00000001986)	safb (ENSACLG00000001926)	malt2 (ENSACLG00000001893)	mrpl54 (ENSACLG00000001877)	fam32a (ENSACLG00000001864)	fh (ENSACLG00000001856)	ENSACLG00000001846	hdgfl2 (ENSACLG00000001765)	ap3d1 (ENSACLG00000001499)	cdc34a (ENSACLG00000001137)	C2CD4C (ENSACLG00000001094)	gna15.4 (ENSACLG00000001029)	gna11a (ENSACLG00000000974)	ENSACLG00000000939 ##22	ENSACLG00000000896 ##22	ENSACLG00000000691 ##22	plpp2b (ENSACLG00000000674)	mier2 (ENSACLG00000000665)	s1pr3a (ENSACLG00000000659) ##18	shdb (ENSACLG00000000617)	ENSACLG00000000541 #26	shc2 (ENSACLG00000000471)	odf3l2b (ENSACLG00000000430)	cks2 (ENSACLG00000000410)	ENSACLG00000000216	ENSACLG00000000207	ENSACLG00000000191	foxe3 (ENSACLG00000000181)	ENSACLG00000000171
Zebra mbuna	MODERN SPECIES	1105	tpm4a (ENSMZEG00005009249)	ENSMZEG00005009234	ENSMZEG00005009183	lpl (ENSMZEG00005009172)	safb (ENSMZEG00005009120)	malt2 (ENSMZEG00005009058)	mrpl54 (ENSMZEG00005009023)	fam32a (ENSMZEG00005009001)	fh (ENSMZEG00005008986)	hdgfl2 (ENSMZEG00005008974)	ap3d1 (ENSMZEG00005008914)	cdc34a (ENSMZEG00005008890)	C2CD4C (ENSMZEG00005008886)	gna15.4 (ENSMZEG00005008870)	gna11a (ENSMZEG00005008850)	ENSMZEG00005008827 ##22	ENSMZEG00005008803 ##22	ENSMZEG00005008700 ##22	plpp2b (ENSMZEG00005008652)	mier2 (ENSMZEG00005008631)	s1pr3a (ENSMZEG00005008624) ##18	shdb (ENSMZEG00005008584)	ENSMZEG00005008538 #26	shc2 (ENSMZEG00005008477)	cks2 (ENSMZEG00005008454)	odf3l2b (ENSMZEG00005008435)	CPAMD8 (ENSMZEG00005008390)	ENSMZEG00005008346	ENSMZEG00005008322	foxe3 (ENSMZEG00005008310)	ENSMZEG00005008296
Burton s mouthbrooder	MODERN SPECIES	307	ENSHBUG00000009311	ENSHBUG00000009291	lpl (ENSHBUG00000009247)	safb (ENSHBUG00000009218)	malt2 (ENSHBUG00000009137)	mrpl54 (ENSHBUG00000009028)	fam32a (ENSHBUG00000008990)	fh (ENSHBUG00000008979)	ENSHBUG00000008966	ENSHBUG00000008943	ap3d1 (ENSHBUG00000008884)	cdc34a (ENSHBUG00000008622)	C2CD4C (ENSHBUG00000008597)	gna15.4 (ENSHBUG00000008588)	gna11a (ENSHBUG00000008547)	ENSHBUG00000000213 ##22	ENSHBUG00000008444 ##22	ENSHBUG00000008383 ##22	plpp2b (ENSHBUG00000008365)	mier2 (ENSHBUG00000008339)	s1pr3a (ENSHBUG00000008322) ##18	shdb (ENSHBUG00000008308)	ENSHBUG00000008298 #26	shc2 (ENSHBUG00000008215)	cks2 (ENSHBUG00000008163)	odf3l2b (ENSHBUG00000008142)	CPAMD8 (ENSHBUG00000008101)	ENSHBUG00000008019	ENSHBUG00000007986	foxe3 (ENSHBUG00000007978)	ENSHBUG00000007965
Nile tilapia	MODERN SPECIES	14	ENSONIG00000002328	lpl (ENSONIG00000002321)	safb (ENSONIG00000002318)	malt2 (ENSONIG00000002314)	mrpl54 (ENSONIG00000035988)	fam32a (ENSONIG00000002311)	fh (ENSONIG00000020822)	ENSONIG00000042491	hdgfl2 (ENSONIG00000002307)	ap3d1 (ENSONIG00000002299)	cdc34a (ENSONIG00000040170)	C2CD4C (ENSONIG00000020821)	gna15.4 (ENSONIG00000037339)	gna11a (ENSONIG00000002275)	ENSONIG00000034420	ENSONIG00000002273 ##22	ENSONIG00000002262 ##22	ENSONIG00000002245 ##22	plpp2b (ENSONIG00000002238)	mier2 (ENSONIG00000034877)	s1pr3a (ENSONIG00000020820) ##18	shdb (ENSONIG00000002233)	ENSONIG00000036222 #26	shc2 (ENSONIG00000002211)	cks2 (ENSONIG00000007762)	odf3l2b (ENSONIG00000002207)	ENSONIG00000002194	ENSONIG00000002193	foxe3 (ENSONIG00000020819)	ENSONIG00000020818	ENSONIG00000002192
Midas cichlid	MODERN SPECIES	799																ENSACIG00000013000 ##22	ENSACIG00000013019 ##22	ENSACIG00000013057 ##22	ENSACIG00000013087 ##22	ENSACIG00000013128 ##22	plpp2b (ENSACIG00000013141)	s1pr3a (ENSACIG00000013153) ##18	shdb (ENSACIG00000013166)	ENSACIG00000013222 #26	shc2 (ENSACIG00000013269)	ENSACIG00000013313	ENSACIG00000013338	cks2 (ENSACIG00000013349)	odf3l2b (ENSACIG00000013357)	ENSACIG00000013371	ENSACIG00000013379
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988
Eupercaria	ANCESTRAL SPECIES	8	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Tetraodontidae	ANCESTRAL SPECIES	5	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000154706.rb.a	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a
Tetraodon	MODERN SPECIES		RAB8A (ENSTNIG00000015474)	tpm4a (ENSTNIG00000000267)	ENSTNIG00000015473	ENSTNIG00000015472	lpl (ENSTNIG00000015471)	safb (ENSTNIG00000015470)	malt2 (ENSTNIG00000015469)	mrpl54 (ENSTNIG00000015468)	fam32a (ENSTNIG00000015467)	ENSTNIG00000015465	ap3d1 (ENSTNIG00000015464)	cdc34a (ENSTNIG00000015462)	C2CD4C (ENSTNIG00000015461)	gna15.4 (ENSTNIG00000015460)	gna11a (ENSTNIG00000015459)	chico (ENSTNIG00000009553) ##22	ENSTNIG00000015458 ##22	ENSTNIG00000015457 ##22	plpp2b (ENSTNIG00000015456)	mier2 (ENSTNIG00000015455)	s1pr3a (ENSTNIG00000015454) ##18	shdb (ENSTNIG00000015453)	ENSTNIG00000015452 #26	shc2 (ENSTNIG00000015451)	odf3l2b (ENSTNIG00000015450)	CPAMD8 (ENSTNIG00000015449)	ENSTNIG00000002026	foxe3 (ENSTNIG00000015448)	ENSTNIG00000015447	ENSTNIG00000005111	scyl3 (ENSTNIG00000005112)
Eupecaria_A	ANCESTRAL SPECIES	11	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Ballan wrasse	MODERN SPECIES	558											CERS1 (ENSLBEG00000014373)	ncln (ENSLBEG00000014415) #17	s1pr4 (ENSLBEG00000014539) #18	MYO9B (ENSLBEG00000014595)	gna11a (ENSLBEG00000014741)	ENSLBEG00000014818 ##22	ENSLBEG00000014855 ##22
Eupecaria_B	ANCESTRAL SPECIES	10	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Perciformes	ANCESTRAL SPECIES	8	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Cottioidei	ANCESTRAL SPECIES	5	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a	ENSGT00940000165000
Lumpfish	MODERN SPECIES	19	tpm4a (ENSCLMG00005013338)	ENSCLMG00005013569	ENSCLMG00005013570	lpl (ENSCLMG00005013572)	safb (ENSCLMG00005013575)	malt2 (ENSCLMG00005013577)	mrpl54 (ENSCLMG00005013581)	fam32a (ENSCLMG00005013582)	fh (ENSCLMG00005013584)	hdgfl2 (ENSCLMG00005013588)	ap3d1 (ENSCLMG00005013594)	cdc34a (ENSCLMG00005013596)	C2CD4C (ENSCLMG00005013598)	gna15.4 (ENSCLMG00005013599)	gna11a (ENSCLMG00005013600)	ENSCLMG00005013657 ##22	ENSCLMG00005013660 ##22	ENSCLMG00005013673 ##22	plpp2b (ENSCLMG00005015411)	s1pr3a (ENSCLMG00005015412) ##18	shdb (ENSCLMG00005015413)	ENSCLMG00005000064	ENSCLMG00005000082	shc2 (ENSCLMG00005000098)	cks2 (ENSCLMG00005000115)	odf3l2b (ENSCLMG00005000129)	ENSCLMG00005000185	ENSCLMG00005000192	foxe3 (ENSCLMG00005000201)	ENSCLMG00005000203	ENSCLMG00005000209
Perciformes_a	ANCESTRAL SPECIES	6	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Pike perch	MODERN SPECIES	21	ENSSLUG00000005436	ENSSLUG00000005369	ENSSLUG00000005288	lpl (ENSSLUG00000005201)	safb (ENSSLUG00000023053)	mrpl54 (ENSSLUG00000023040)	fam32a (ENSSLUG00000023035)	fh (ENSSLUG00000023032)	ENSSLUG00000023027	ENSSLUG00000023022	ap3d1 (ENSSLUG00000022970)	cdc34a (ENSSLUG00000022936)	C2CD4C (ENSSLUG00000022931)	gna15.4 (ENSSLUG00000022925)	gna11a (ENSSLUG00000022916)	ENSSLUG00000022902 ##22	ENSSLUG00000022846 ##22	ENSSLUG00000022678 ##22	plpp2b (ENSSLUG00000022660)	s1pr3a (ENSSLUG00000022659) ##18	shdb (ENSSLUG00000022647)	ENSSLUG00000022639	ENSSLUG00000022631 #26	shc2 (ENSSLUG00000022616)	cks2 (ENSSLUG00000022609)	odf3l2b (ENSSLUG00000022597)	CPAMD8 (ENSSLUG00000022548)	ENSSLUG00000022530	ENSSLUG00000022522	foxe3 (ENSSLUG00000022520)	ENSSLUG00000022515
Eupecaria_C	ANCESTRAL SPECIES	4	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000161645.a
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	3	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000161645.a
European seabass	MODERN SPECIES	17	TPM4 (ENSDLAG00005001319)	ENSDLAG00005025987	ENSDLAG00005001680	ENSDLAG00005001709	lpl (ENSDLAG00005001734)	safb (ENSDLAG00005001831)	ENSDLAG00005001845	fam32a (ENSDLAG00005028714)	ENSDLAG00005026417	hdgfl2 (ENSDLAG00005034213)	ap3d1 (ENSDLAG00005001932)	cdc34a (ENSDLAG00005029619)	ENSDLAG00005026602	gna15.4 (ENSDLAG00005001959)	gna11a (ENSDLAG00005029687)	ENSDLAG00005002015 ##22	ENSDLAG00005031496 ##22	ENSDLAG00005002057 ##22	plpp2b (ENSDLAG00005002073)	s1pr3a (ENSDLAG00005034990) ##18	shdb (ENSDLAG00005002098)	ENSDLAG00005002104 #26	ENSDLAG00005002116 #26	shc2 (ENSDLAG00005002129)	cks2 (ENSDLAG00005002148)	odf3l2b (ENSDLAG00005002154)	ENSDLAG00005002161	ENSDLAG00005002193	foxe3 (ENSDLAG00005002201)	foxd2 (ENSDLAG00005002204)	trabd2b (ENSDLAG00005002208)
Large yellow croaker	MODERN SPECIES	489	ENSLCRG00005009559	ENSLCRG00005009558	lpl (ENSLCRG00005009555)	safb (ENSLCRG00005015774)	mrpl54 (ENSLCRG00005015773)	fam32a (ENSLCRG00005015771)	malt2 (ENSLCRG00005015769)	mrpl54 (ENSLCRG00005015768)	fh (ENSLCRG00005015767)	hdgfl2 (ENSLCRG00005015766)	ap3d1 (ENSLCRG00005013704)	cdc34a (ENSLCRG00005013692)	C2CD4C (ENSLCRG00005013690)	gna15.4 (ENSLCRG00005013686)	gna11a (ENSLCRG00005013635)	ENSLCRG00005013633 ##22	ENSLCRG00005013616 ##22	ENSLCRG00005013380 ##22	plpp2b (ENSLCRG00005013370)	mier2 (ENSLCRG00005013369)	s1pr3a (ENSLCRG00005013367) ##18	shdb (ENSLCRG00005013362)	ENSLCRG00005013357 #26	ENSLCRG00005013355 #26	shc2 (ENSLCRG00005013352)	odf3l2b (ENSLCRG00005013349)	cks2 (ENSLCRG00005013344)	ENSLCRG00005013341	ENSLCRG00005013340	ENSLCRG00005013337	foxe3 (ENSLCRG00005013336)
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988
Carangaria	ANCESTRAL SPECIES	7	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988
Pleuronectoidei	ANCESTRAL SPECIES	30	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.d #26	ENSGT01000000215054	ENSGT00940000159237.c #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988
Turbot	MODERN SPECIES	3	ENSSMAG00000038073	ENSSMAG00000009354	ENSSMAG00000009524	lpl (ENSSMAG00000009483)	safb (ENSSMAG00000009316)	ENSSMAG00000009239	mrpl54 (ENSSMAG00000009226)	ENSSMAG00000009218	hdgfl2 (ENSSMAG00000009191)	ap3d1 (ENSSMAG00000009006)	cdc34a (ENSSMAG00000033339)	ENSSMAG00000008969	ENSSMAG00000028673	gna15.4 (ENSSMAG00000031032)	gna11a (ENSSMAG00000008940)	ENSSMAG00000008915 ##22	ENSSMAG00000008891 ##22	ENSSMAG00000008843 ##22	plpp2b (ENSSMAG00000008817)	mier2 (ENSSMAG00000008781)	s1pr3a (ENSSMAG00000008771) ##18	shdb (ENSSMAG00000008749)	ENSSMAG00000008723 #26	ENSSMAG00000033988	shc2 (ENSSMAG00000008667)	cks2 (ENSSMAG00000008644)	odf3l2b (ENSSMAG00000008627)	ENSSMAG00000025024	ENSSMAG00000008593	foxe3 (ENSSMAG00000008584)	ENSSMAG00000008580
Tongue sole	MODERN SPECIES	11	APC2 (ENSCSEG00000000443)	gadd45ba (ENSCSEG00000000436)	CARTPT (ENSCSEG00000000433)	ENSCSEG00000000432	ENSCSEG00000000429	ENSCSEG00000000415	med8 (ENSCSEG00000000413)	aldh9a1a.1 (ENSCSEG00000000405)	wdr18 (ENSCSEG00000000391)	kif2a (ENSCSEG00000000385)	GFUS (ENSCSEG00000000378)	serpinb1 (ENSCSEG00000000377)	gmds (ENSCSEG00000000366)	ENSCSEG00000000356	exoc2 (ENSCSEG00000000348)	ENSCSEG00000000343 ##22	ENSCSEG00000000341 ##22	ENSCSEG00000000337 ##22	ENSCSEG00000000334	ENSCSEG00000000315 ##22	plpp2b (ENSCSEG00000000309)	mier2 (ENSCSEG00000000306)	s1pr3a (ENSCSEG00000000302) ##18	shdb (ENSCSEG00000000300)	ENSCSEG00000000295	ENSCSEG00000000293 #26	ENSCSEG00000000291 #26	shc2 (ENSCSEG00000000288)	cks2 (ENSCSEG00000000287)	odf3l2b (ENSCSEG00000000285)	ENSCSEG00000000281
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Seriola	ANCESTRAL SPECIES	21	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Greater amberjack	MODERN SPECIES	111	tpm4a (ENSSDUG00000010102)	ENSSDUG00000009825	ENSSDUG00000009789	lpl (ENSSDUG00000009768)	safb (ENSSDUG00000009652)	malt2 (ENSSDUG00000009559)	mrpl54 (ENSSDUG00000009545)	fam32a (ENSSDUG00000009529)	fh (ENSSDUG00000009520)	hdgfl2 (ENSSDUG00000009499)	ap3d1 (ENSSDUG00000009405)	cdc34a (ENSSDUG00000009373)	C2CD4C (ENSSDUG00000009364)	gna15.4 (ENSSDUG00000009320)	gna11a (ENSSDUG00000009285)	ENSSDUG00000009261 ##22	ENSSDUG00000009173 ##22	ENSSDUG00000009080 ##22	plpp2b (ENSSDUG00000009053)	mier2 (ENSSDUG00000009046)	s1pr3a (ENSSDUG00000009038) ##18	shdb (ENSSDUG00000008997)	ENSSDUG00000008939 #26	shc2 (ENSSDUG00000008913)	cks2 (ENSSDUG00000008893)	odf3l2b (ENSSDUG00000008868)	ENSSDUG00000008836	ENSSDUG00000008821	ENSSDUG00000008799	foxe3 (ENSSDUG00000008787)	foxd2 (ENSSDUG00000008776)
Yellowtail amberjack	MODERN SPECIES	2696	ENSSLDG00000001550	ENSSLDG00000001590	ENSSLDG00000001612	lpl (ENSSLDG00000001657)	safb (ENSSLDG00000001670)	malt2 (ENSSLDG00000001693)	mrpl54 (ENSSLDG00000001781)	fam32a (ENSSLDG00000001808)	FH (ENSSLDG00000001813)	hdgfl2 (ENSSLDG00000001828)	ap3d1 (ENSSLDG00000001882)	cdc34a (ENSSLDG00000002303)	C2CD4C (ENSSLDG00000002340)	gna15.4 (ENSSLDG00000002351)	gna11a (ENSSLDG00000002375)	ENSSLDG00000002417 ##22	ENSSLDG00000002469 ##22	ENSSLDG00000002622 ##22	plpp2b (ENSSLDG00000002913)	mier2 (ENSSLDG00000002961)	s1pr3a (ENSSLDG00000002978) ##18	shdb (ENSSLDG00000003002)	ENSSLDG00000003071 #26	shc2 (ENSSLDG00000003174)	cks2 (ENSSLDG00000003206)	odf3l2b (ENSSLDG00000003227)	ENSSLDG00000003293	ENSSLDG00000003318	ENSSLDG00000003378	ENSSLDG00000003392	foxe3 (ENSSLDG00000003406)
Barramundi perch	MODERN SPECIES	43	tpm4a (ENSLCAG00010027042)	ENSLCAG00010027074	ENSLCAG00010027078	lpl (ENSLCAG00010027083)	safb (ENSLCAG00010027088)	malt2 (ENSLCAG00010027090)	mrpl54 (ENSLCAG00010027096)	fam32a (ENSLCAG00010027098)	fh (ENSLCAG00010027101)	hdgfl2 (ENSLCAG00010027104)	ap3d1 (ENSLCAG00010027113)	ENSLCAG00010027123	C2CD4C (ENSLCAG00010027131)	gna15.4 (ENSLCAG00010027133)	gna11a (ENSLCAG00010027141)	ENSLCAG00010027150 ##22	ENSLCAG00010027154 ##22	ENSLCAG00010027158 ##22	ENSLCAG00010027161 ##22	ENSLCAG00010027165 ##22	plpp2b (ENSLCAG00010027171)	mier2 (ENSLCAG00010027173)	s1pr3a (ENSLCAG00010027175) ##18	shdb (ENSLCAG00010027177)	shc2 (ENSLCAG00010027181)	ENSLCAG00010027186 #26	ENSLCAG00010027188 #26	cks2 (ENSLCAG00010027190)	odf3l2b (ENSLCAG00010027193)	CPAMD8 (ENSLCAG00010027197)	ENSLCAG00010027209
Anabantaria	ANCESTRAL SPECIES	7	ENSGT01030000234542.b.b.a.a.a.b.xb	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Zig-zag eel	MODERN SPECIES	18	ENSMAMG00000003412	ENSMAMG00000003401	lpl (ENSMAMG00000003371)	safb (ENSMAMG00000003357)	malt2 (ENSMAMG00000003300)	mrpl54 (ENSMAMG00000003291)	ENSMAMG00000003252	fam32a (ENSMAMG00000027042)	ENSMAMG00000025889	ENSMAMG00000003232	ap3d1 (ENSMAMG00000003036)	cdc34a (ENSMAMG00000027451)	ENSMAMG00000002995	gna15.4 (ENSMAMG00000002974)	gna11a (ENSMAMG00000027912)	ENSMAMG00000025131 ##22	ENSMAMG00000002871 ##22	ENSMAMG00000002850 ##22	plpp2b (ENSMAMG00000002813)	mier2 (ENSMAMG00000002785)	s1pr3a (ENSMAMG00000002774) ##18	shdb (ENSMAMG00000002697)	ENSMAMG00000028362	ENSMAMG00000002614 #26	shc2 (ENSMAMG00000002604)	cks2 (ENSMAMG00000028020)	odf3l2b (ENSMAMG00000002577)	ENSMAMG00000025549	ENSMAMG00000002540	ENSMAMG00000002522	foxe3 (ENSMAMG00000002513)
Anabantoidei	ANCESTRAL SPECIES	6	ENSGT00950000182891.a.a.b.a.a	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000161645.a
Siamese fighting fish	MODERN SPECIES	15	TPM4 (ENSBSLG00000005672)	ENSBSLG00000005329	ENSBSLG00000005088	lpl (ENSBSLG00000004914)	safb (ENSBSLG00000004849)	malt2 (ENSBSLG00000004730)	mrpl54 (ENSBSLG00000004726)	fam32a (ENSBSLG00000004724)	fh (ENSBSLG00000004723)	hdgfl2 (ENSBSLG00000004722)	ap3d1 (ENSBSLG00000004467)	cdc34a (ENSBSLG00000004409)	C2CD4C (ENSBSLG00000004403)	gna15.4 (ENSBSLG00000004396)	gna11a (ENSBSLG00000004386)	ENSBSLG00000004379 ##22	ENSBSLG00000004375	ENSBSLG00000004219 ##22	ENSBSLG00000003966 ##22	plpp2b (ENSBSLG00000003885)	mier2 (ENSBSLG00000003868)	s1pr3a (ENSBSLG00000003851) ##18	shdb (ENSBSLG00000003838)	ENSBSLG00000003804 #26	shc2 (ENSBSLG00000003786)	cks2 (ENSBSLG00000003757)	odf3l2b (ENSBSLG00000003732)	ENSBSLG00000003707	ENSBSLG00000003683	foxe3 (ENSBSLG00000003663)	foxd2 (ENSBSLG00000003643)
Climbing perch	MODERN SPECIES	17	TPM4 (ENSATEG00000027105)	ENSATEG00000005133	ENSATEG00000005125	lpl (ENSATEG00000005074)	safb (ENSATEG00000004975)	ENSATEG00000025645	fam32a (ENSATEG00000004935)	ENSATEG00000004915	ENSATEG00000027973	ENSATEG00000026130	ap3d1 (ENSATEG00000004868)	cdc34a (ENSATEG00000004839)	ENSATEG00000004832	gna15.4 (ENSATEG00000004814)	gna11a (ENSATEG00000026186)	ENSATEG00000004765 ##22	ENSATEG00000004756 ##22	ENSATEG00000004752 ##22	plpp2b (ENSATEG00000028088)	s1pr3a (ENSATEG00000004693) ##18	shdb (ENSATEG00000004654)	ENSATEG00000004630 #26	ENSATEG00000026367 #26	ENSATEG00000029770	shc2 (ENSATEG00000004501)	cks2 (ENSATEG00000004476)	odf3l2b (ENSATEG00000004453)	ENSATEG00000027601	ENSATEG00000004400	ENSATEG00000004386	foxe3 (ENSATEG00000004359)
Tiger tail seahorse	MODERN SPECIES	469	ENSHCOG00000000538	nr2c2ap (ENSHCOG00000020130)	rfxank (ENSHCOG00000020050)	borcs8 (ENSHCOG00000020036)	ENSHCOG00000019994	ENSHCOG00000019979	mrpl54 (ENSHCOG00000000536)	fam32a (ENSHCOG00000019943)	fh (ENSHCOG00000019933)	hdgfl2 (ENSHCOG00000019926)	ap3d1 (ENSHCOG00000019916)	cdc34a (ENSHCOG00000019862)	C2CD4C (ENSHCOG00000019845)	gna15.4 (ENSHCOG00000019841)	gna11a (ENSHCOG00000000532)	ENSHCOG00000019802 ##22	ENSHCOG00000019770 ##22	ENSHCOG00000019757 ##22	plpp2b (ENSHCOG00000019704)	ENSHCOG00000019678	s1pr3a (ENSHCOG00000019674) ##18	shdb (ENSHCOG00000019657)	ENSHCOG00000019641 #26	shc2 (ENSHCOG00000019622)	odf3l2b (ENSHCOG00000019571)	cks2 (ENSHCOG00000019554)	ENSHCOG00000019544	ENSHCOG00000019525	ENSHCOG00000019499	foxe3 (ENSHCOG00000000771)	ENSHCOG00000019460
Protacanthopterygii	ANCESTRAL SPECIES	13	ENSGT00940000164939.a.a	ENSGT00940000154737.c.h	ENSGT00940000160191	ENSGT00530000063841.b.a	ENSGT00940000159440	ENSGT00940000165728.c	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.a #26	ENSGT01000000215054	ENSGT00940000159237.b #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399
Salmoninae	ANCESTRAL SPECIES	11	ENSGT00940000164939.a.a.d	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES	9	ENSGT01040000240444.A.b.a.b.h.a	ENSGT00940000164939.a.a.c	ENSGT00940000154737.c.h.e	ENSGT00530000063841.b.a.c	ENSGT00940000159440.a	ENSGT00940000165728.c.a	ENSGT00940000166572.f	ENSGT00440000034888.d	ENSGT00940000157273.p	ENSGT00940000153942.a.f.fb	ENSGT00550000075067.g	ENSGT00940000164811.a.a.a	ENSGT00940000161259.B.a.a	ENSGT00940000165296.h	ENSGT00940000162569.b.k.a.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.c ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a.d ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.a ##22	ENSGT00940000155885.b.n	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e ##18	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00940000159237.b #26	ENSGT00950000182870.a.a.a.a.l.a	ENSGT00950000182870.a.a.a.a.l.b.b	ENSGT00950000182870.a.a.a.a.l.b.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a
Salmo	ANCESTRAL SPECIES	20	ENSGT01040000240444.A.b.a.b.h.a	ENSGT00940000164939.a.a.c	ENSGT00940000154737.c.h.e	ENSGT00530000063841.b.a.c	ENSGT00940000159440.a	ENSGT00940000165728.c.a	ENSGT00940000166572.f	ENSGT00440000034888.d	ENSGT00940000157273.p	ENSGT00940000153942.a.f.fb	ENSGT00550000075067.g	ENSGT00940000164811.a.a.a	ENSGT00940000161259.B.a.a	ENSGT00940000165296.h	ENSGT00940000162569.b.k.a.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.c ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a.d ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.a ##22	ENSGT00940000155885.b.n	ENSGT01060000250235.a	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e ##18	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00940000159237.b #26	ENSGT00950000182870.a.a.a.a.l.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974
River trout	MODERN SPECIES	33	ENSSTUG00000003060	rorca (ENSSTUG00000003087)	sh3gl1b (ENSSTUG00000003504)	stap2b (ENSSTUG00000003667)	fsd1 (ENSSTUG00000003704)	si:ch211-129c21.1 (ENSSTUG00000003887)	scamp4 (ENSSTUG00000003974)	chaf1a (ENSSTUG00000004013)	ubxn6 (ENSSTUG00000004086)	hdgfl2 (ENSSTUG00000004154)	ap3d1 (ENSSTUG00000004272)	cdc34a (ENSSTUG00000004407)	C2CD4C (ENSSTUG00000004430)	ENSSTUG00000004434	gna11a (ENSSTUG00000004471)	ENSSTUG00000004636 ##22	ENSSTUG00000004670 ##22	ENSSTUG00000004740 ##22	plpp2b (ENSSTUG00000004769)	ENSSTUG00000004781	ENSSTUG00000004787	mier2 (ENSSTUG00000004800)	ENSSTUG00000004822 ##18	shdb (ENSSTUG00000004834)	ENSSTUG00000004865	shc2 (ENSSTUG00000004877)	cks2 (ENSSTUG00000004900)	odf3l2b (ENSSTUG00000004918)	CPAMD8 (ENSSTUG00000004932)	ENSSTUG00000005086	rex1bd (ENSSTUG00000005100)
Atlantic salmon	MODERN SPECIES	15	ENSSSAG00000073636	rorca (ENSSSAG00000073620)	sh3gl1b (ENSSSAG00000094199)	stap2b (ENSSSAG00000073824)	fsd1 (ENSSSAG00000073839)	si:ch211-129c21.1 (ENSSSAG00000073964)	scamp4 (ENSSSAG00000111412)	chaf1a (ENSSSAG00000073996)	ubxn6 (ENSSSAG00000067810)	hdgfl2 (ENSSSAG00000074014)	ap3d1 (ENSSSAG00000074051)	cdc34a (ENSSSAG00000113875)	ENSSSAG00000101216	ENSSSAG00000074400	gna11a (ENSSSAG00000096438)	ENSSSAG00000095544 ##22	ENSSSAG00000074464 ##22	ENSSSAG00000082868 ##22	ENSSSAG00000108481	ENSSSAG00000105434	plpp2b (ENSSSAG00000089456)	ENSSSAG00000074902	ENSSSAG00000119111	mier2 (ENSSSAG00000074906)	s1pr3a (ENSSSAG00000086393) ##18	shdb (ENSSSAG00000074927)	ENSSSAG00000083710	ENSSSAG00000074933 #26	shc2 (ENSSSAG00000074941)	odf3l2b (ENSSSAG00000099149)	ENSSSAG00000084153
Oncorhynchus	ANCESTRAL SPECIES	51	ENSGT01040000240444.A.b.a.b.h.a	ENSGT00940000164939.a.a.c	ENSGT00940000154737.c.h.e	ENSGT00530000063841.b.a.c	ENSGT00940000159440.a	ENSGT00940000165728.c.a	ENSGT00940000166572.f	ENSGT00440000034888.d	ENSGT00940000157273.p	ENSGT00940000153942.a.f.fb	ENSGT00550000075067.g	ENSGT00940000164811.a.a.a	ENSGT00940000161259.B.a.a	ENSGT00940000165296.h	ENSGT00940000162569.b.k.a.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.c ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a.d ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.a ##22	ENSGT00940000155885.b.n	ENSGT00940000158915.`b	ENSGT01030000234573.A.b.b.a.d	ENSGT01050000244887.A.b.a.e ##18	ENSGT00940000159004.b.a.b	ENSGT01000000215054	ENSGT00950000182870.a.a.a.a.l.b.b	ENSGT00950000182870.a.a.a.a.l.b.a	ENSGT00950000182971.B.a.a.e	ENSGT00940000160480.c.a.e	ENSGT00940000162399.p.a	ENSGT00390000010974	ENSGT00940000166035
Rainbow trout	MODERN SPECIES	22	rorca (ENSOMYG00000000914)	sh3gl1b (ENSOMYG00000000858)	ENSOMYG00000059987	stap2b (ENSOMYG00000064983)	fsd1 (ENSOMYG00000000812)	si:ch211-129c21.1 (ENSOMYG00000000757)	scamp4 (ENSOMYG00000000736)	chaf1a (ENSOMYG00000000722)	ubxn6 (ENSOMYG00000000709)	hdgfl2 (ENSOMYG00000000691)	ap3d1 (ENSOMYG00000000585)	cdc34a (ENSOMYG00000000472)	ENSOMYG00000000457	ENSOMYG00000000454	gna11a (ENSOMYG00000000435)	ENSOMYG00000070575 ##22	ENSOMYG00000000278 ##22	ENSOMYG00000000391 ##22	plpp2b (ENSOMYG00000000137)	ENSOMYG00000062490	ENSOMYG00000059976	mier2 (ENSOMYG00000000074)	ENSOMYG00000064720	s1pr3a (ENSOMYG00000025708) ##18	ENSOMYG00000062276	shdb (ENSOMYG00000025662)	ENSOMYG00000025635	ENSOMYG00000025625	shc2 (ENSOMYG00000025608)	ENSOMYG00000050684	cks2 (ENSOMYG00000053448)
Salmoninae_a	ANCESTRAL SPECIES	22	ENSGT00940000164939.a.a.d	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.a.b.f.e ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00940000159004.b.b	ENSGT00940000159237.a.a #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00940000164939.a.a.d	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00940000159237.a.a #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988
Rainbow trout	MODERN SPECIES	26	sh3gl1b (ENSOMYG00000030609)	mpnd (ENSOMYG00000030539)	stap2b (ENSOMYG00000030471)	fsd1 (ENSOMYG00000030355)	si:ch211-129c21.1 (ENSOMYG00000030221)	scamp4 (ENSOMYG00000030209)	chaf1a (ENSOMYG00000030140)	ubxn6 (ENSOMYG00000030096)	hdgfl2 (ENSOMYG00000030018)	ap3d1 (ENSOMYG00000029879)	cdc34a (ENSOMYG00000029618)	ENSOMYG00000029566	ENSOMYG00000029558	ENSOMYG00000060898	gna11a (ENSOMYG00000029506)	ENSOMYG00000029400 ##22	ENSOMYG00000029438 ##22	ENSOMYG00000054334 ##22	ENSOMYG00000029345 ##22	plpp2b (ENSOMYG00000029320)	mier2 (ENSOMYG00000029225)	ENSOMYG00000029274	s1pr3a (ENSOMYG00000029085) ##18	shdb (ENSOMYG00000029068)	ENSOMYG00000029036 #26	ENSOMYG00000053015 #26	ENSOMYG00000057044	ENSOMYG00000048887	shc2 (ENSOMYG00000029021)	cks2 (ENSOMYG00000054974)	odf3l2b (ENSOMYG00000028966)
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00940000164939.a.a.d	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00940000159237.a.a #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT00940000156569.a.b.b.f
Coho salmon	MODERN SPECIES	4	sh3gl1b (ENSOKIG00005037515)	mpnd (ENSOKIG00005037686)	stap2b (ENSOKIG00005037788)	fsd1 (ENSOKIG00005037830)	si:ch211-129c21.1 (ENSOKIG00005038016)	scamp4 (ENSOKIG00005038188)	chaf1a (ENSOKIG00005038259)	ubxn6 (ENSOKIG00005038315)	hdgfl2 (ENSOKIG00005038376)	ap3d1 (ENSOKIG00005038444)	cdc34a (ENSOKIG00005038988)	ENSOKIG00005039022	C2CD4C (ENSOKIG00005039032)	ENSOKIG00005039050	gna11a (ENSOKIG00005039080)	ENSOKIG00005039228 ##22	ENSOKIG00005039288 ##22	ENSOKIG00005039302 ##22	ENSOKIG00005039330 ##22	plpp2b (ENSOKIG00005039353)	mier2 (ENSOKIG00005039390)	ENSOKIG00005039559	s1pr3a (ENSOKIG00005039568) ##18	shdb (ENSOKIG00005039582)	ENSOKIG00005039592 #26	ENSOKIG00005039631 #26	shc2 (ENSOKIG00005039647)	ENSOKIG00005039686	cks2 (ENSOKIG00005039691)	CPAMD8 (ENSOKIG00005039733)	ENSOKIG00005039845
Chinook salmon	MODERN SPECIES	29	rorca (ENSOTSG00005042373)	sh3gl1b (ENSOTSG00005042323)	mpnd (ENSOTSG00005042322)	stap2b (ENSOTSG00005042321)	fsd1 (ENSOTSG00005042319)	si:ch211-129c21.1 (ENSOTSG00005042312)	scamp4 (ENSOTSG00005042309)	ubxn6 (ENSOTSG00005042299)	hdgfl2 (ENSOTSG00005042295)	ap3d1 (ENSOTSG00005041967)	cdc34a (ENSOTSG00005041965)	C2CD4C (ENSOTSG00005041964)	ENSOTSG00005041963	ENSOTSG00005041962	gna11a (ENSOTSG00005041900)	ENSOTSG00005041899 ##22	ENSOTSG00005041898 ##22	plpp2b (ENSOTSG00005041897)	mier2 (ENSOTSG00005041895)	ENSOTSG00005041894	s1pr3a (ENSOTSG00005041893) ##18	shdb (ENSOTSG00005041892)	ENSOTSG00005041891 #26	ENSOTSG00005041890 #26	ENSOTSG00005041889	shc2 (ENSOTSG00005041888)	cks2 (ENSOTSG00005041887)	ENSOTSG00005041886	ENSOTSG00005041884	ENSOTSG00005041883	crlf1b (ENSOTSG00005041882)
Salmo	ANCESTRAL SPECIES	14	ENSGT00940000164939.a.a.d	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT00940000156569.a.b.b.f	ENSGT00390000008279.b.c	ENSGT00950000183049.C.a.a.a
River trout	MODERN SPECIES	14	SEMA6B (ENSSTUG00000035311)	sh3gl1b (ENSSTUG00000035243)	mpnd (ENSSTUG00000034947)	stap2b (ENSSTUG00000034871)	fsd1 (ENSSTUG00000034644)	si:ch211-129c21.1 (ENSSTUG00000034463)	scamp4 (ENSSTUG00000034435)	chaf1a (ENSSTUG00000034380)	ubxn6 (ENSSTUG00000034363)	hdgfl2 (ENSSTUG00000034332)	ap3d1 (ENSSTUG00000033249)	cdc34a (ENSSTUG00000033180)	C2CD4C (ENSSTUG00000033171)	ENSSTUG00000033152	gna11a (ENSSTUG00000032997)	ENSSTUG00000032981 ##22	ENSSTUG00000032902	ENSSTUG00000032780 ##22	plpp2b (ENSSTUG00000032753)	mier2 (ENSSTUG00000032731)	ENSSTUG00000032722	s1pr3a (ENSSTUG00000032718) ##18	shdb (ENSSTUG00000032697)	ENSSTUG00000032692 #26	ENSSTUG00000032685	shc2 (ENSSTUG00000032682)	cks2 (ENSSTUG00000032675)	odf3l2b (ENSSTUG00000032639)	CPAMD8 (ENSSTUG00000032422)	ENSSTUG00000032392	crlf1b (ENSSTUG00000032330)
Huchen	MODERN SPECIES	1307														ENSHHUG00000049595	gna11a (ENSHHUG00000049601)	ENSHHUG00000049617 ##22	ENSHHUG00000049623 ##22	ENSHHUG00000049628 ##22	ENSHHUG00000049632
Euteleosteomorpha	ANCESTRAL SPECIES	210						ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a	ENSGT00940000165458	ENSGT00950000183049.C.b	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c	ENSGT00390000004600.b.a
Protacanthopterygii	ANCESTRAL SPECIES	104	ENSGT00940000155601.g	ENSGT00940000155130	ENSGT00940000159504	ENSGT00940000157906	ENSGT00940000157458	ENSGT00500000044895	ENSGT00940000159560	ENSGT00940000165447	ENSGT00950000183104.B.a.b.a.b ##12	ENSGT00940000158681.b	ENSGT00530000064359.c.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a	ENSGT00940000165458	ENSGT00950000183049.C.b	ENSGT00550000075086	ENSGT00940000166078	ENSGT00940000166763	ENSGT00950000183071.a.a.b.c.a	ENSGT00390000004600.b.a	ENSGT00940000154308.D.c.a.a
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	953													ENSGT00390000017913.`b.b.c.b	ENSGT00390000018395.c.a	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a ##22	ENSGT00940000154630.a	ENSGT00940000159004.a.c
Salmoninae_a	DUPLICATION
Salmoninae_a	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.a ##22
Oncorhynchus	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.a ##22
Oncorhynchus_a	ANCESTRAL SPECIES	86	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.b.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c	ENSGT00940000159228.a.b.b	ENSGT00940000155026.c.h	ENSGT00940000158681.b.d.b	ENSGT00530000064359.c.b.m.a.a	ENSGT00530000064359.c.b.m.a.b	ENSGT00390000017913.`b.b.c.a	ENSGT00390000018395.c.b.b	ENSGT00940000163250.C.q.a	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b ##22	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.a ##22	ENSGT00940000155885.a.c.b	ENSGT00940000159004.a.d.a.a	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458.g	ENSGT00550000075086.d	ENSGT00940000166078.c.c	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.d	ENSGT00940000166763.d.a	ENSGT00950000183071.a.a.b.c.a.b.a	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b
Coho salmon	MODERN SPECIES	7	GNG7 (ENSOKIG00005018810)	ENSOKIG00005018777	CARTPT (ENSOKIG00005018773)	ENSOKIG00005018757	ENSOKIG00005018751	NRDC (ENSOKIG00005018680)	SLITRK3 (ENSOKIG00005018661)	ENSOKIG00005018637	ENSOKIG00005018617	ENSOKIG00005018609	PDCD10 (ENSOKIG00005018545)	ENSOKIG00005018532	ISYNA1 (ENSOKIG00005018478)	ENSOKIG00005018458	gna11b (ENSOKIG00005018387)	ENSOKIG00005018372 ##22	PLPP2 (ENSOKIG00005018366)	shda (ENSOKIG00005018347)	yju2 (ENSOKIG00005018340)	ebi3 (ENSOKIG00005018328)	keap1a (ENSOKIG00005018304)	crlf1a (ENSOKIG00005018246)	SSBP4 (ENSOKIG00005018015)	ENSOKIG00005017989	ENSOKIG00005017928	ENSOKIG00005017898	otomp (ENSOKIG00005017882)	hs6st1b (ENSOKIG00005017860)	UGGT1 (ENSOKIG00005017654)	ENSOKIG00005017619	ENSOKIG00005017601
Chinook salmon	MODERN SPECIES	94													pdcd10a (ENSOTSG00005017802)	ISYNA1 (ENSOTSG00005017241)	gna11b (ENSOTSG00005017224)	ENSOTSG00005017223 ##22	theg (ENSOTSG00005017222)	shda (ENSOTSG00005017221)	yju2 (ENSOTSG00005017220)	odf3l2a (ENSOTSG00005017219)	ENSOTSG00005017218	ENSOTSG00005017217
Salmo	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.a ##22
Atlantic salmon	MODERN SPECIES	7	diras1b (ENSSSAG00000089337)	ENSSSAG00000080039	ENSSSAG00000121721	ENSSSAG00000116278	ENSSSAG00000080026	ENSSSAG00000075435	ENSSSAG00000080022	ENSSSAG00000080020	ENSSSAG00000098402	PDC10 (ENSSSAG00000080019)	ENSSSAG00000080018	ENSSSAG00000115306	ENSSSAG00000080014	ENSSSAG00000080012	gna11b (ENSSSAG00000108714)	ENSSSAG00000079986 ##22	ENSSSAG00000093634	shda (ENSSSAG00000114133)	yju2 (ENSSSAG00000075105)	ebi3 (ENSSSAG00000079970)	crlf1a (ENSSSAG00000079959)	keap1a (ENSSSAG00000079871)	ENSSSAG00000079443	d2hgdh (ENSSSAG00000079411)	ENSSSAG00000079387	ENSSSAG00000094489	otomp (ENSSSAG00000103893)	acvr1l (ENSSSAG00000079396)	ENSSSAG00000079371	ENSSSAG00000078840	ENSSSAG00000116422
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00940000159915.b	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c	ENSGT00940000154611.ad.a.d	ENSGT00940000159228.a.b.a.a.a	ENSGT00940000159228.a.b.b	ENSGT00940000155026.c	ENSGT00940000158681.b.d	ENSGT00530000064359.c.b.m.a.a	ENSGT00530000064359.c.b.m.a.b	ENSGT00390000017913.`b.b.c.a	ENSGT00390000018395.c.b.b	ENSGT00940000163250.C.q.a	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b ##22	ENSGT00390000018395.c.b.a	ENSGT00940000163250.C.q.b	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b ##22	ENSGT00940000155885.a.d	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458	ENSGT00550000075086.d	ENSGT00940000166078.c	ENSGT00940000166763.d	ENSGT00950000183071.a.a.b.c.a.b
Oncorhynchus	ANCESTRAL SPECIES	70	ENSGT00940000161517.D.b.b	ENSGT00940000167061.e.a	ENSGT00940000159915.b.d	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c	ENSGT00940000159228.a.b.b	ENSGT00940000155026.c.h	ENSGT00940000158681.b.d.b	ENSGT00530000064359.c.b.m.a.a	ENSGT00530000064359.c.b.m.a.b	ENSGT00390000017913.`b.b.c.a	ENSGT00390000018395.c.b.b	ENSGT00940000163250.C.q.a	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b ##22	ENSGT00940000155885.a.c.b	ENSGT00940000159004.a.d.a.a	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458	ENSGT00950000183049.C.a.b.h	ENSGT00550000075086.d	ENSGT00940000166078.c	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.d	ENSGT00940000166763.d.a	ENSGT00950000183071.a.a.b.c.a.b.a	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b
Rainbow trout	MODERN SPECIES	9	zgc:101744 (ENSOMYG00000021190)	ENSOMYG00000021197	ENSOMYG00000054032	ENSOMYG00000021227	ENSOMYG00000051390	ENSOMYG00000070260	ENSOMYG00000073823	ENSOMYG00000022042	ENSOMYG00000028995	ENSOMYG00000029073	ENSOMYG00000068347	ENSOMYG00000029039	ENSOMYG00000029105	ENSOMYG00000029120	gna11b (ENSOMYG00000029266)	ENSOMYG00000060163 ##22	ENSOMYG00000029333	shda (ENSOMYG00000029342)	yju2 (ENSOMYG00000029355)	ebi3 (ENSOMYG00000060222)	odf3l2a (ENSOMYG00000029374)	crlf1a (ENSOMYG00000029383)	keap1a (ENSOMYG00000029406)	ENSOMYG00000029537	d2hgdh (ENSOMYG00000029891)	acvr1l (ENSOMYG00000029939)	otomp (ENSOMYG00000030021)	ENSOMYG00000030085	ENSOMYG00000053703	uggt1 (ENSOMYG00000030624)	ENSOMYG00000031247
Oncorhynchus_a	ANCESTRAL SPECIES	86	ENSGT00940000167061.e.a	ENSGT00940000159915.b.d	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.b.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c	ENSGT00940000159228.a.b.b	ENSGT00940000155026.c.h	ENSGT00940000158681.b.d.b	ENSGT00530000064359.c.b.m.a.a	ENSGT00530000064359.c.b.m.a.b	ENSGT00390000017913.`b.b.c.a	ENSGT00390000018395.c.b.b	ENSGT00940000163250.C.q.a	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b ##22	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.a ##22	ENSGT00940000155885.a.c.b	ENSGT00940000159004.a.d.a.a	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458.g	ENSGT00550000075086.d	ENSGT00940000166078.c.c	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.d	ENSGT00940000166763.d.a	ENSGT00950000183071.a.a.b.c.a.b.a
Chinook salmon	MODERN SPECIES	5	ENSOTSG00005015901	zgc:101744 (ENSOTSG00005015903)	ENSOTSG00005015906	ENSOTSG00005015910	ENSOTSG00005015913	ENSOTSG00005015918	CARTPT (ENSOTSG00005015924)	ENSOTSG00005015926	ENSOTSG00005015930	NRDC (ENSOTSG00005015965)	ENSOTSG00005022133	PDCD10 (ENSOTSG00005022134)	ISYNA1 (ENSOTSG00005022161)	ENSOTSG00005022174	gna11b (ENSOTSG00005022175)	ENSOTSG00005022176 ##22	shda (ENSOTSG00005022177)	yju2 (ENSOTSG00005022178)	ebi3 (ENSOTSG00005022180)	odf3l2a (ENSOTSG00005022181)	crlf1a (ENSOTSG00005022182)	keap1a (ENSOTSG00005022183)	ENSOTSG00005022184	ENSOTSG00005022185	ENSOTSG00005022188	ENSOTSG00005022189	d2hgdh (ENSOTSG00005022190)	acvr1l (ENSOTSG00005022191)	ENSOTSG00005022193	otomp (ENSOTSG00005022194)	hs6st1b (ENSOTSG00005022195)
Salmo	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b ##22
Atlantic salmon	MODERN SPECIES	8	ENSSSAG00000085365	ENSSSAG00000117374	zgc:101744 (ENSSSAG00000101692)	gng7 (ENSSSAG00000099909)	ENSSSAG00000054313	ENSSSAG00000094874	ENSSSAG00000109633	ENSSSAG00000106935	ENSSSAG00000099581	prdm9 (ENSSSAG00000054294)	ENSSSAG00000075423	ENSSSAG00000080027	ENSSSAG00000075253	ENSSSAG00000075245	gna11b (ENSSSAG00000084504)	ENSSSAG00000075134 ##22	ENSSSAG00000096795	shda (ENSSSAG00000075110)	ENSSSAG00000116937	ENSSSAG00000075094	ENSSSAG00000104045	ENSSSAG00000073044	d2hgdh (ENSSSAG00000073042)	ENSSSAG00000096061	acvr1l (ENSSSAG00000073041)	ENSSSAG00000073038	otomp (ENSSSAG00000073035)	ENSSSAG00000073029	uggt1 (ENSSSAG00000072953)	ENSSSAG00000072938	ENSSSAG00000072947
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.a ##22
Huchen	MODERN SPECIES	2334										ENSHHUG00000048319	PDCD10 (ENSHHUG00000048206)	ENSHHUG00000048199	ENSHHUG00000048193	ENSHHUG00000048186	gna11b (ENSHHUG00000048040)	ENSHHUG00000048034 ##22	PLPP2 (ENSHHUG00000048032)	shda (ENSHHUG00000048024)	yju2 (ENSHHUG00000048018)	ENSHHUG00000048015	odf3l2a (ENSHHUG00000048005)	crlf1a (ENSHHUG00000048002)	keap1a (ENSHHUG00000047998)	SSBP4 (ENSHHUG00000047816)	ENSHHUG00000047801	ENSHHUG00000047793	acvr1l (ENSHHUG00000047779)	ENSHHUG00000047772	otomp (ENSHHUG00000047764)
Salmoninae_a	ANCESTRAL SPECIES	193																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.a ##22	ENSGT00940000155885.a.c	ENSGT00940000159004.a.d.a	ENSGT00530000063615.a.q.a	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.e	ENSGT00950000183049.C.a.b	ENSGT00390000012355.A.b	ENSGT00550000075086.c	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b
Salmo	ANCESTRAL SPECIES	41	ENSGT00990000204656.a.b.a	ENSGT01080000257344.a.b.a.b	ENSGT00940000161517.D.b.a.b.b	ENSGT00940000167061.e.b	ENSGT01100000263497.E.a.b.k.a	ENSGT00940000163581.f.b.l.b	ENSGT00940000163581.f.b.k.b	ENSGT00390000018319.a.b.b.b.a.b.d	ENSGT00940000154611.ad.a.d	ENSGT00940000159228.a.b.a.a.a	ENSGT00940000158211.g.b.a	ENSGT00940000158681.b.c	ENSGT00390000018395.c.b.a	ENSGT00940000163250.C.q.b	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.a ##22	ENSGT00940000155885.a.c	ENSGT00940000159004.a.d.a	ENSGT00530000063615.a.q.a	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.e	ENSGT00390000012355.A.b	ENSGT00550000075086.c	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.b	ENSGT00940000166763.d	ENSGT00950000183071.a.a.b.c.a.b	ENSGT00390000004600.b.a.g	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a	ENSGT00940000156207.b.c.a.a.b.a	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.a.b
River trout	MODERN SPECIES	32	ENSSTUG00000044354	ENSSTUG00000044362	zgc:101744 (ENSSTUG00000044372)	ENSSTUG00000044383	GNG7 (ENSSTUG00000038875)	ENSSTUG00000038876	ENSSTUG00000038887	CARTPT (ENSSTUG00000038907)	ENSSTUG00000038916	ENSSTUG00000038933	ENSSTUG00000038944	SLITRK3 (ENSSTUG00000039077)	ISYNA1 (ENSSTUG00000039107)	ENSSTUG00000039195	gna11b (ENSSTUG00000039210)	ENSSTUG00000039316 ##22	PLPP2 (ENSSTUG00000039322)	shda (ENSSTUG00000039327)	yju2 (ENSSTUG00000039333)	odf3l2a (ENSSTUG00000039344)	crlf1a (ENSSTUG00000039354)	SSBP4 (ENSSTUG00000039426)	ENSSTUG00000042209	d2hgdh (ENSSTUG00000042238)	acvr1l (ENSSTUG00000042270)	ENSSTUG00000042317	otomp (ENSSTUG00000042353)	HS6ST1 (ENSSTUG00000042476)	uggt1 (ENSSTUG00000042640)	ENSSTUG00000043329	ENSSTUG00000043340
Salmoninae	ANCESTRAL SPECIES	461																ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b ##22	ENSGT00940000155885.a	ENSGT00940000159004.a.d.a	ENSGT00530000063615.a.q.a	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.e	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458	ENSGT00950000183049.C.a.b	ENSGT00390000012355.A.b	ENSGT00550000075086	ENSGT00940000166078.d
Salmoninae_a	ANCESTRAL SPECIES	49	ENSGT00940000154611.ad.a.d	ENSGT00940000159228.a.b.a.a.a	ENSGT00940000159228.a.b.b	ENSGT00940000155026.c	ENSGT00940000158681.b.d	ENSGT00530000064359.c.b.m.a.a	ENSGT00530000064359.c.b.m.a.b	ENSGT00390000017913.`b.b.c.a	ENSGT00390000018395.c.b.b	ENSGT00940000163250.C.q.a	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.a.b ##22	ENSGT00390000018395.c.b.a	ENSGT00940000163250.C.q.b	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b ##22	ENSGT00940000155885.a.d	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458	ENSGT00550000075086.d	ENSGT00940000166078.c	ENSGT00940000166763.d	ENSGT00950000183071.a.a.b.c.a.b	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000163513.d	ENSGT00390000000673.a.b.c
Oncorhynchus	ANCESTRAL SPECIES	49	ENSGT00940000167061.f	ENSGT00940000167061.e.b	ENSGT00940000159915.b.c	ENSGT01100000263497.E.a.b.k.a	ENSGT00940000163581.f.b.l.b.a	ENSGT00940000163581.f.b.k.b	ENSGT00390000018319.a.b.b.b.a.b.d	ENSGT00940000154611.ad.a.d	ENSGT00940000159228.a.b.a.b	ENSGT00940000155026.c.g	ENSGT00940000158681.b.d.a	ENSGT00530000064359.c.b.m.b	ENSGT00390000017913.`b.b.c.b	ENSGT00390000018395.c.a	ENSGT00940000162569.b.k.b.h	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b ##22	ENSGT00940000155885.a.c.a	ENSGT00940000159004.a.d.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a.c	ENSGT00530000063615.a.q.b.a	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.e	ENSGT00950000183049.C.a.b.g	ENSGT00390000012355.A.b	ENSGT00550000075086.c	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.c	ENSGT00940000166763.d.b	ENSGT00950000183071.a.a.b.c.a.b.b	ENSGT00390000004600.b.a.g
Rainbow trout	MODERN SPECIES	28	ENSOMYG00000062491	zgc:101744 (ENSOMYG00000004202)	ENSOMYG00000004224	ENSOMYG00000004245	ENSOMYG00000004279	ENSOMYG00000073479	ENSOMYG00000068448	ENSOMYG00000004349	ENSOMYG00000070157	ENSOMYG00000004766	ENSOMYG00000005025	ENSOMYG00000005012	ENSOMYG00000005085	ENSOMYG00000005398	gna11b (ENSOMYG00000005549)	ENSOMYG00000005646 ##22	ENSOMYG00000005754	shda (ENSOMYG00000005812)	yju2 (ENSOMYG00000005836)	ENSOMYG00000005860	ENSOMYG00000076501	ENSOMYG00000006146	d2hgdh (ENSOMYG00000006336)	acvr1l (ENSOMYG00000006432)	ENSOMYG00000006485	otomp (ENSOMYG00000006550)	ENSOMYG00000073951	ENSOMYG00000054008	uggt1 (ENSOMYG00000006857)	ENSOMYG00000007103	ENSOMYG00000056207
Oncorhynchus_a	ANCESTRAL SPECIES	6	ENSGT01080000257344.a.b.b.a.b.b	ENSGT00990000204656.a.b.a	ENSGT00940000167061.e.b	ENSGT00940000159915.b.c	ENSGT01100000263497.E.a.b.k.a	ENSGT00940000163581.f.b.l.b.a	ENSGT00940000163581.f.b.k.b	ENSGT00390000018319.a.b.b.b.a.b.d	ENSGT00940000154611.ad.a.d	ENSGT00940000159228.a.b.a.b	ENSGT00940000155026.c.g	ENSGT00940000158681.b.d.a	ENSGT00530000064359.c.b.m.b	ENSGT00390000017913.`b.b.c.b	ENSGT00390000018395.c.b.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b ##22	ENSGT00940000155885.a.c.a	ENSGT00940000159004.a.d.a.b	ENSGT00530000063615.a.q.b.a	ENSGT00940000160480.c.b.c	ENSGT00940000156569.a.b.a.e	ENSGT00550000075086.c	ENSGT00940000166078.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.c	ENSGT00940000166763.d.b	ENSGT00950000183071.a.a.b.c.a.b.b	ENSGT00390000004600.b.a.g	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.a	ENSGT00390000000673.a.b.d	ENSGT00940000155099.k.b.e.b.b	ENSGT00950000183009.db.a.b.b
Coho salmon	MODERN SPECIES	25	ENSOKIG00005027407	ENSOKIG00005027430	CARTPT (ENSOKIG00005027507)	ENSOKIG00005027520	ENSOKIG00005027527	ENSOKIG00005027539	ENSOKIG00005027549	ENSOKIG00005027561	NRDC (ENSOKIG00005027880)	SLITRK3 (ENSOKIG00005030061)	ENSOKIG00005030072	PDCD10 (ENSOKIG00005030091)	ISYNA1 (ENSOKIG00005030253)	ENSOKIG00005030351	gna11b (ENSOKIG00005030387)	ENSOKIG00005030475 ##22	PLPP2 (ENSOKIG00005030536)	shda (ENSOKIG00005028430)	yju2 (ENSOKIG00005028457)	ODF3L2 (ENSOKIG00005028473)	CRLF1 (ENSOKIG00005028497)	SSBP4 (ENSOKIG00005028601)	ENSOKIG00005029124	d2hgdh (ENSOKIG00005029136)	acvr1l (ENSOKIG00005029179)	ENSOKIG00005029264	otomp (ENSOKIG00005029296)	HS6ST1 (ENSOKIG00005029331)	uggt1 (ENSOKIG00005029368)	ENSOKIG00005029574	ENSOKIG00005029596
Salmo	ANCESTRAL SPECIES	48	ENSGT01030000234589.g.b.lb.b.a	ENSGT00940000167061.e.a	ENSGT00940000159915.b	ENSGT01100000263497.E.a.b.k.b	ENSGT00940000163581.f.b.l.a	ENSGT00390000018319.a.b.b.b.a.b.c	ENSGT00940000159228.a.b.a.a.b	ENSGT00940000158211.g.b.b	ENSGT00940000155026.c.e	ENSGT00940000158681.b.d	ENSGT00530000064359.c.b.m.a.a	ENSGT00390000017913.`b.b.d	ENSGT00940000163250.C.q.a	ENSGT00390000018395.c.b.b	ENSGT00940000162569.b.k.b.g	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b.b.b ##22	ENSGT00940000155885.a.d	ENSGT00940000159004.a.d.b	ENSGT00530000063615.a.q.b.b	ENSGT00940000160050	ENSGT00940000160480.c.b.d	ENSGT00940000156569.a.b.a.f	ENSGT00940000165458	ENSGT00950000183049.C.a.b	ENSGT00550000075086.d	ENSGT00940000163520.A.a.a.a.a.a.a.g.a.a.a.a.a.b.b.a	ENSGT00940000166763.c	ENSGT00950000183071.a.a.b.c.a.a	ENSGT00390000004600.b.a.h	ENSGT01100000263520.a.b.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000163513.d
River trout	MODERN SPECIES	36	ENSSTUG00000051042	GNG7 (ENSSTUG00000051041)	ENSSTUG00000051040	CARTPT (ENSSTUG00000051038)	ENSSTUG00000051035	ENSSTUG00000051033	NRDC (ENSSTUG00000050852)	SLITRK3 (ENSSTUG00000050814)	ENSSTUG00000050808	PDCD10 (ENSSTUG00000050805)	ENSSTUG00000050804	ISYNA1 (ENSSTUG00000050801)	ISYNA1 (ENSSTUG00000050796)	ENSSTUG00000050794	gna11b (ENSSTUG00000050793)	ENSSTUG00000050787 ##22	PLPP2 (ENSSTUG00000050778)	shda (ENSSTUG00000050767)	yju2 (ENSSTUG00000050759)	ebi3 (ENSSTUG00000050755)	odf3l2a (ENSSTUG00000050752)	crlf1a (ENSSTUG00000050745)	keap1a (ENSSTUG00000050739)	SSBP4 (ENSSTUG00000050664)	d2hgdh (ENSSTUG00000050650)	acvr1l (ENSSTUG00000050643)	ENSSTUG00000050641	otomp (ENSSTUG00000050639)	HS6ST1 (ENSSTUG00000050637)	uggt1 (ENSSTUG00000050440)	ENSSTUG00000050395
Huchen	MODERN SPECIES	1408												ENSHHUG00000044574	PDCD10 (ENSHHUG00000044565)	ENSHHUG00000044549	gna11b (ENSHHUG00000044381)	ENSHHUG00000044376 ##22	ENSHHUG00000044375	PLPP2 (ENSHHUG00000044372)	shda (ENSHHUG00000044370)	yju2 (ENSHHUG00000044366)	ebi3 (ENSHHUG00000044363)	odf3l2a (ENSHHUG00000044359)	crlf1a (ENSHHUG00000044351)	ENSHHUG00000044342	keap1a (ENSHHUG00000044328)	SSBP4 (ENSHHUG00000044204)	ENSHHUG00000044193	d2hgdh (ENSHHUG00000044183)	acvr1l (ENSHHUG00000044175)	ENSHHUG00000044168	otomp (ENSHHUG00000044158)
Northern pike	MODERN SPECIES	21	ENSELUG00000008078	zgc:101744 (ENSELUG00000008207)	diras1b (ENSELUG00000025518)	GNG7 (ENSELUG00000008235)	ifi44c2 (ENSELUG00000008265)	CARTPT (ENSELUG00000034339)	ENSELUG00000008296	ENSELUG00000008336	NRDC (ENSELUG00000008437)	SLITRK3 (ENSELUG00000008468)	ENSELUG00000008479	pdcd10a (ENSELUG00000008555)	ISYNA1 (ENSELUG00000008587)	ENSELUG00000008611	gna11b (ENSELUG00000008649)	TLE5 (ENSELUG00000028407) ##22	PLPP2 (ENSELUG00000025589)	theg (ENSELUG00000027610)	shda (ENSELUG00000008738)	yju2 (ENSELUG00000008776)	ebi3 (ENSELUG00000008819)	odf3l2a (ENSELUG00000008837)	crlf1a (ENSELUG00000008880)	keap1a (ENSELUG00000008917)	SSBP4 (ENSELUG00000008998)	ENSELUG00000009064	ENSELUG00000009037	poglut1 (ENSELUG00000009087)	ENSELUG00000009144	VANGL1 (ENSELUG00000009195)	ENSELUG00000009208
Acanthomorphata	ANCESTRAL SPECIES	135	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT01100000263497.E.a.b
Cod	MODERN SPECIES	18	ENSGMOG00000004276	keap1a (ENSGMOG00000004256)	ENSGMOG00000003947	ENSGMOG00000024957	ENSGMOG00000027795	ENSGMOG00000032048	ENSGMOG00000035278	ENSGMOG00000023572	ENSGMOG00000032279	ENSGMOG00000012076	ENSGMOG00000020578	ENSGMOG00000012071	ENSGMOG00000012069	ENSGMOG00000026137	gna11b (ENSGMOG00000012068)	chico (ENSGMOG00000012064) ##22	ENSGMOG00000023803	shda (ENSGMOG00000033895)	yju2 (ENSGMOG00000012051)	ENSGMOG00000012049	ENSGMOG00000035293	ENSGMOG00000012872	ENSGMOG00000012023	ENSGMOG00000017102	ENSGMOG00000008527	ENSGMOG00000028828	ENSGMOG00000032905	ENSGMOG00000024142	ENSGMOG00000034863	ENSGMOG00000036647	ENSGMOG00000022621
Euacanthomorphacea	ANCESTRAL SPECIES	11	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.a	ENSGT00990000204656	ENSGT00940000161517.D.d.b
Percomorphaceae	ANCESTRAL SPECIES	13	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b	ENSGT01080000257344.a.b.a.b	ENSGT01080000257344.a.a
Tiger tail seahorse	MODERN SPECIES	204	ENSHCOG00000015944	SSBP4 (ENSHCOG00000015968)	ENSHCOG00000015972	keap1a (ENSHCOG00000015989)	crlf1a (ENSHCOG00000016009)	odf3l2a (ENSHCOG00000016019)	ENSHCOG00000016031	FAM163A (ENSHCOG00000016036)	NRDC (ENSHCOG00000016077)	SLITRK3 (ENSHCOG00000016103)	pdcd10a (ENSHCOG00000016136)	ISYNA1 (ENSHCOG00000016192)	tpgs1 (ENSHCOG00000016205)	ENSHCOG00000016213	gna11b (ENSHCOG00000016239)	ENSHCOG00000016276 ##22	ENSHCOG00000016299	synj2bp (ENSHCOG00000016306)	lgals3a (ENSHCOG00000016314)	gmfb (ENSHCOG00000000457)	gmfb (ENSHCOG00000016370)	cnih1 (ENSHCOG00000016389)	cdkn3 (ENSHCOG00000016393)	sos2 (ENSHCOG00000016427)	l2hgdh (ENSHCOG00000016471)	dmac2l (ENSHCOG00000016519)	cdkl1 (ENSHCOG00000016541)	map4k5 (ENSHCOG00000016795)	atl1 (ENSHCOG00000016850)	sav1 (ENSHCOG00000016856)	ENSHCOG00000016864
Percomorphaceae_B	ANCESTRAL SPECIES	11	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT01080000257344.a.a	ENSGT00940000161517.D.d.a
Percomorphaceae_C	ANCESTRAL SPECIES	12	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.a	ENSGT00990000204656	ENSGT01080000257344.a.a
Percomorphaceae_D	ANCESTRAL SPECIES	10	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.f	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.a.a.a.b	ENSGT00940000163478
Carangaria	ANCESTRAL SPECIES	10	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.f	ENSGT01030000234589.g.b	ENSGT00940000172403	ENSGT01080000257344.a.b.a.a.b.b
Carangaria_A	ANCESTRAL SPECIES	4	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.e	ENSGT01080000257344.a.b.a.a.b.a.a	ENSGT01080000257344.a.b.a.a.a.a.b	ENSGT00940000161517.D.d.a
Seriola	ANCESTRAL SPECIES	3	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.e	ENSGT01080000257344.a.b.a.a.b.a.a.e.a.a.b	ENSGT00940000161517.D.d.a	ENSGT00940000164644
Yellowtail amberjack	MODERN SPECIES	3136	keap1a (ENSSLDG00000001548)	crlf1a (ENSSLDG00000001488)	odf3l2a (ENSSLDG00000001469)	ebi3 (ENSSLDG00000001416)	ENSSLDG00000001403	FAM163A (ENSSLDG00000001397)	NRDC (ENSSLDG00000001379)	SLITRK3 (ENSSLDG00000001358)	ENSSLDG00000001327	ENSSLDG00000001266	pdcd10a (ENSSLDG00000001229)	ENSSLDG00000001206	ISYNA1 (ENSSLDG00000001158)	ENSSLDG00000001151	gna11b (ENSSLDG00000001118)	ENSSLDG00000001078 ##22
Greater amberjack	MODERN SPECIES	62	keap1a (ENSSDUG00000013386)	crlf1a (ENSSDUG00000013336)	odf3l2a (ENSSDUG00000013302)	ebi3 (ENSSDUG00000013261)	ENSSDUG00000013170	FAM163A (ENSSDUG00000013155)	NRDC (ENSSDUG00000013108)	SLITRK3 (ENSSDUG00000013078)	ENSSDUG00000013066	ENSSDUG00000013024	pdcd10a (ENSSDUG00000012988)	ISYNA1 (ENSSDUG00000012948)	tpgs1 (ENSSDUG00000012942)	ENSSDUG00000012928	gna11b (ENSSDUG00000012881)	ENSSDUG00000012857 ##22	PLPP2 (ENSSDUG00000012838)	shda (ENSSDUG00000012806)	yju2 (ENSSDUG00000012788)	CARTPT (ENSSDUG00000012756)	ENSSDUG00000012723	ifi44c2 (ENSSDUG00000012708)	GADD45B (ENSSDUG00000012698)	gng7 (ENSSDUG00000012677)	diras1b (ENSSDUG00000012669)	zgc:101744 (ENSSDUG00000012656)	ENSSDUG00000012598	ENSSDUG00000012581	ENSSDUG00000012567	ENSSDUG00000012548	ENSSDUG00000012541
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	1653																ENSLCAG00010026218 ##22
Barramundi perch	MODERN SPECIES	99	ENSLCAG00010015816	keap1a (ENSLCAG00010015791)	crlf1a (ENSLCAG00010015780)	odf3l2a (ENSLCAG00010015775)	ENSLCAG00010015765	ENSLCAG00010015735	FAM163A (ENSLCAG00010015727)	NRDC (ENSLCAG00010014985)	SLITRK3 (ENSLCAG00010014756)	si:dkey-56i24.1 (ENSLCAG00010014718)	PDCD10 (ENSLCAG00010014688)	ISYNA1 (ENSLCAG00010014670)	tpgs1 (ENSLCAG00010014664)	ENSLCAG00010014660	gna11b (ENSLCAG00010014609)	ENSLCAG00010014593 ##22	PLPP2 (ENSLCAG00010014541)	ENSLCAG00010014530	ENSLCAG00010014521	shda (ENSLCAG00010014519)	yju2 (ENSLCAG00010014514)	CARTPT (ENSLCAG00010014510)	ENSLCAG00010014503	ifi44c2 (ENSLCAG00010014499)	GADD45B (ENSLCAG00010014497)	gng7 (ENSLCAG00010014496)	diras1b (ENSLCAG00010014495)	zgc:101744 (ENSLCAG00010014492)	ENSLCAG00010014489	ENSLCAG00010014486	ENSLCAG00010014485
Pleuronectoidei	ANCESTRAL SPECIES	5	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000157459.b	ENSGT00940000156793	ENSGT00390000016216	ENSGT00940000165020.b	ENSGT00940000164449	ENSGT00940000163117	ENSGT00940000173788	ENSGT00940000158908	ENSGT00950000182843.a.a.a.a	ENSGT00940000160040.B.a.a	ENSGT01050000244924.a.a.b.a.b	ENSGT00940000160580.b	ENSGT00940000160280.d	ENSGT00940000161021.a.b
Turbot	MODERN SPECIES	8	ENSSMAG00000017406	keap1a (ENSSMAG00000017380)	crlf1a (ENSSMAG00000017309)	odf3l2a (ENSSMAG00000017287)	ebi3 (ENSSMAG00000017254)	ENSSMAG00000017235	ENSSMAG00000017231	ENSSMAG00000017108	ENSSMAG00000017098	ENSSMAG00000017082	ENSSMAG00000017048	ENSSMAG00000017008	ENSSMAG00000029682	ENSSMAG00000017001	gna11b (ENSSMAG00000017000)	ENSSMAG00000016980 ##22	ENSSMAG00000025823	ENSSMAG00000030848	theg (ENSSMAG00000032277)	ENSSMAG00000016869	ENSSMAG00000016856	ENSSMAG00000016846	ENSSMAG00000016833	ENSSMAG00000016805	ENSSMAG00000016791	ENSSMAG00000016742	ENSSMAG00000016671	ENSSMAG00000016635	efna2a (ENSSMAG00000016619)	ptbp1a (ENSSMAG00000016551)	palm1b (ENSSMAG00000016538)
Tongue sole	MODERN SPECIES		ENSCSEG00000005338	SSBP4 (ENSCSEG00000005331)	keap1a (ENSCSEG00000005323)	crlf1a (ENSCSEG00000005317)	odf3l2a (ENSCSEG00000005314)	ebi3 (ENSCSEG00000005299)	ENSCSEG00000005295	NRDC (ENSCSEG00000005245)	SLITRK3 (ENSCSEG00000005235)	si:dkey-56i24.1 (ENSCSEG00000005229)	pdcd10a (ENSCSEG00000005222)	ISYNA1 (ENSCSEG00000005218)	ENSCSEG00000005215	ENSCSEG00000005213	ENSCSEG00000005206	ENSCSEG00000005200 ##22	PLPP2 (ENSCSEG00000005198)	ENSCSEG00000005192	ptgr2 (ENSCSEG00000005186)	TMEM62 (ENSCSEG00000005181)	ENSCSEG00000005172	ENSCSEG00000005039	ENSCSEG00000005035	ENSCSEG00000005032	sptb (ENSCSEG00000005018)	snap23.1 (ENSCSEG00000005014)	efna2a (ENSCSEG00000005012)	ptbp1a (ENSCSEG00000004996)	palm1b (ENSCSEG00000004991)	plppr3a (ENSCSEG00000004987)	ENSCSEG00000004902
Anabantaria	ANCESTRAL SPECIES	10	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.e	ENSGT01080000257344.a.a	ENSGT00940000161517.D.d.b.f	ENSGT01030000234589.g.b.l
Anabantoidei	ANCESTRAL SPECIES	9	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.e	ENSGT01080000257344.a.a	ENSGT01030000234589.g.b.l	ENSGT01080000257344.a.b.a.a.a.b
Climbing perch	MODERN SPECIES	13	ebi3 (ENSATEG00000008848)	ENSATEG00000008838	ENSATEG00000008789	ENSATEG00000008762	ENSATEG00000008719	ENSATEG00000029817	ENSATEG00000004181	ENSATEG00000008544	ENSATEG00000008703	ENSATEG00000008521	ENSATEG00000008494	ENSATEG00000008445	ENSATEG00000008429	ENSATEG00000008422	gna11b (ENSATEG00000008401)	ENSATEG00000029670 ##22	ENSATEG00000008342	ENSATEG00000008329	shda (ENSATEG00000008312)	yju2 (ENSATEG00000008266)	ENSATEG00000028525	ENSATEG00000008234	ifi44c2 (ENSATEG00000008195)	GADD45B (ENSATEG00000029760)	gng7 (ENSATEG00000008119)	DIRAS1 (ENSATEG00000027051)	zgc:101744 (ENSATEG00000008086)	ENSATEG00000007895	ENSATEG00000026527	ENSATEG00000008030	ENSATEG00000028153
Siamese fighting fish	MODERN SPECIES	12	FAM163A (ENSBSLG00000023609)	NRDC (ENSBSLG00000023720)	SLITRK3 (ENSBSLG00000024726)	ENSBSLG00000024735	ENSBSLG00000024745	ENSBSLG00000024751	ENSBSLG00000024757	ENSBSLG00000024768	ENSBSLG00000024776	ENSBSLG00000024780	pdcd10a (ENSBSLG00000024784)	ISYNA1 (ENSBSLG00000024796)	tpgs1 (ENSBSLG00000024836)	ENSBSLG00000024845	ENSBSLG00000024906	ENSBSLG00000024909 ##22	PLPP2 (ENSBSLG00000024914)	ENSBSLG00000024915	shda (ENSBSLG00000024921)	yju2 (ENSBSLG00000024927)	CARTPT (ENSBSLG00000024930)	MAP1S (ENSBSLG00000024941)	ENSBSLG00000024951	ENSBSLG00000024981	GADD45B (ENSBSLG00000024989)	gng7 (ENSBSLG00000024995)	diras1b (ENSBSLG00000024999)	zgc:101744 (ENSBSLG00000025381)	ENSBSLG00000025399	ENSBSLG00000025440	ENSBSLG00000025446
Zig-zag eel	MODERN SPECIES	14	ENSMAMG00000025616	ENSMAMG00000003379	keap1a (ENSMAMG00000003345)	crlf1a (ENSMAMG00000003302)	odf3l2a (ENSMAMG00000003268)	ebi3 (ENSMAMG00000003260)	ENSMAMG00000003230	ENSMAMG00000003219	ENSMAMG00000003192	ENSMAMG00000003137	ENSMAMG00000025424	ENSMAMG00000003081	ENSMAMG00000003065	ENSMAMG00000003050	gna11b (ENSMAMG00000003002)	ENSMAMG00000002951 ##22	ENSMAMG00000002922	ENSMAMG00000002900	shda (ENSMAMG00000002868)	yju2 (ENSMAMG00000002849)	ENSMAMG00000002810	ENSMAMG00000026295	ENSMAMG00000002800	ifi44c2 (ENSMAMG00000002775)	GADD45B (ENSMAMG00000002554)	gng7 (ENSMAMG00000002535)	diras1b (ENSMAMG00000002517)	zgc:101744 (ENSMAMG00000026726)	slc1a8b (ENSMAMG00000002411)	ENSMAMG00000025299	tspan37 (ENSMAMG00000002353)
Eupercaria	ANCESTRAL SPECIES	9	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Eupecaria_A	ANCESTRAL SPECIES	10	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.b.a.b
Eupecaria_B	ANCESTRAL SPECIES	11	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Perciformes	ANCESTRAL SPECIES	12	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob	ENSGT00940000163478
Perciformes_a	ANCESTRAL SPECIES	10	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT01080000257344.a.b.a.a.b.a.b	ENSGT01080000257344.a.b.b.a.b
Channel bull blenny	MODERN SPECIES	14	SSBP4 (ENSCGOG00000024454)	keap1a (ENSCGOG00000024445)	crlf1a (ENSCGOG00000024443)	odf3l2a (ENSCGOG00000024442)	ebi3 (ENSCGOG00000024441)	ENSCGOG00000024438	FAM163A (ENSCGOG00000024436)	NRDC (ENSCGOG00000024290)	SLITRK3 (ENSCGOG00000024227)	si:dkey-56i24.1 (ENSCGOG00000024226)	pdcd10a (ENSCGOG00000024206)	ISYNA1 (ENSCGOG00000024162)	tpgs1 (ENSCGOG00000024157)	ENSCGOG00000024156	gna11b (ENSCGOG00000024124)	chico (ENSCGOG00000024117) ##22	PLPP2 (ENSCGOG00000024116)	theg (ENSCGOG00000024115)	shda (ENSCGOG00000024114)	yju2 (ENSCGOG00000024113)	CARTPT (ENSCGOG00000024110)	ENSCGOG00000024109	ENSCGOG00000024108	GADD45B (ENSCGOG00000024105)	gng7 (ENSCGOG00000024104)	diras1b (ENSCGOG00000024100)	zgc:101744 (ENSCGOG00000024099)	ATR (ENSCGOG00000024025)	ENSCGOG00000024009	ENSCGOG00000024007	STAG1 (ENSCGOG00000023170)
Pike perch	MODERN SPECIES	24	ENSSLUG00000005368	keap1a (ENSSLUG00000005290)	crlf1a (ENSSLUG00000005244)	odf3l2a (ENSSLUG00000005218)	ebi3 (ENSSLUG00000025814)	ENSSLUG00000025812	FAM163A (ENSSLUG00000025810)	NRDC (ENSSLUG00000025718)	ENSSLUG00000025661	ENSSLUG00000025659	pdcd10a (ENSSLUG00000025653)	ISYNA1 (ENSSLUG00000025641)	tpgs1 (ENSSLUG00000025636)	ENSSLUG00000025633	gna11b (ENSSLUG00000025627)	ENSSLUG00000025613 ##22	PLPP2 (ENSSLUG00000025608)	theg (ENSSLUG00000025604)	shda (ENSSLUG00000025599)	yju2 (ENSSLUG00000025596)	CARTPT (ENSSLUG00000025593)	ENSSLUG00000025583	ifi44c2 (ENSSLUG00000025574)	GADD45B (ENSSLUG00000025571)	gng7 (ENSSLUG00000025569)	diras1b (ENSSLUG00000025568)	zgc:101744 (ENSSLUG00000025567)	slc1a8b (ENSSLUG00000025564)	ELAVL1 (ENSSLUG00000025562)	ENSSLUG00000025555	ENSSLUG00000025531
Cottioidei	ANCESTRAL SPECIES	8	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob	ENSGT00940000163478	ENSGT00950000182988.a.a.a
Lumpfish	MODERN SPECIES	14	SSBP4 (ENSCLMG00005020898)	keap1a (ENSCLMG00005020895)	crlf1a (ENSCLMG00005020870)	odf3l2a (ENSCLMG00005020867)	ENSCLMG00005020865	ENSCLMG00005020862	ENSCLMG00005020861	NRDC (ENSCLMG00005017406)	SLITRK3 (ENSCLMG00005017341)	si:dkey-56i24.1 (ENSCLMG00005017340)	pdcd10a (ENSCLMG00005017315)	ISYNA1 (ENSCLMG00005017301)	tpgs1 (ENSCLMG00005017299)	ENSCLMG00005017298	gna11b (ENSCLMG00005017289)	ENSCLMG00005017287 ##22	PLPP2 (ENSCLMG00005017286)	shda (ENSCLMG00005017285)	yju2 (ENSCLMG00005017284)	CARTPT (ENSCLMG00005017283)	ENSCLMG00005017282	ifi44c2 (ENSCLMG00005017280)	GADD45B (ENSCLMG00005017279)	gng7 (ENSCLMG00005017278)	diras1b (ENSCLMG00005017277)	zgc:101744 (ENSCLMG00005017275)	ENSCLMG00005017273	ENSCLMG00005017272	rmnd1 (ENSCLMG00005017168)	ENSCLMG00005017166	ENSCLMG00005017008
Stickleback	MODERN SPECIES	15	keap1a (ENSGACG00000009976)	crlf1a (ENSGACG00000009968)	ebi3 (ENSGACG00000009963)	ENSGACG00000009955	ENSGACG00000009949	NRDC (ENSGACG00000009929)	SLITRK3 (ENSGACG00000009924)	ENSGACG00000009921	ENSGACG00000009920	ENSGACG00000009919	pdcd10a (ENSGACG00000009899)	ISYNA1 (ENSGACG00000009858)	tpgs1 (ENSGACG00000009855)	ENSGACG00000009853	gna11b (ENSGACG00000009827)	chico (ENSGACG00000009819) ##22	PLPP2 (ENSGACG00000009810)	shda (ENSGACG00000009807)	yju2 (ENSGACG00000009787)	CARTPT (ENSGACG00000009780)	ENSGACG00000009771	ifi44c2 (ENSGACG00000009755)	tmem30b (ENSGACG00000009709)	kdm1a (ENSGACG00000009679)	ENSGACG00000009678	PTAFR (ENSGACG00000009674)	qkia (ENSGACG00000009650)	ctsl.1 (ENSGACG00000009620)	vgll2b (ENSGACG00000009615)	ythdf2 (ENSGACG00000009603)	ENSGACG00000009591
Eupecaria_C	ANCESTRAL SPECIES	8	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.e.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.a.a.b.b
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	16	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.e.b	ENSGT00530000064359.c.b.o.a.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.a.a.a.b
European seabass	MODERN SPECIES	2	crlf1a (ENSDLAG00005010017)	odf3l2a (ENSDLAG00005010111)	ebi3 (ENSDLAG00005010114)	ENSDLAG00005032040	ENSDLAG00005010223	ENSDLAG00005013034	ENSDLAG00005013044	ENSDLAG00005028316	ENSDLAG00005031394	ENSDLAG00005013060	ENSDLAG00005013126	ENSDLAG00005013251	ENSDLAG00005034550	gna11b (ENSDLAG00005033191)	ENSDLAG00005030698	ENSDLAG00005026744 ##22	ENSDLAG00005013469	theg (ENSDLAG00005029445)	shda (ENSDLAG00005026743)	ENSDLAG00005031093	ENSDLAG00005028483	ifi44c2 (ENSDLAG00005013588)	gng7 (ENSDLAG00005005604)	diras1b (ENSDLAG00005031280)	zgc:101744 (ENSDLAG00005013611)	ENSDLAG00005013630	ENSDLAG00005026616	ENSDLAG00005027636	ENSDLAG00005031493	ENSDLAG00005032659	slc1a8b (ENSDLAG00005026645)
Large yellow croaker	MODERN SPECIES	495	crlf1a (ENSLCRG00005007981)	odf3l2a (ENSLCRG00005007971)	ebi3 (ENSLCRG00005007969)	ENSLCRG00005007965	FAM163A (ENSLCRG00005007964)	ENSLCRG00005007963	NRDC (ENSLCRG00005001922)	SLITRK3 (ENSLCRG00005001452)	ENSLCRG00005001442	PDCD10 (ENSLCRG00005001432)	pdcd10a (ENSLCRG00005017128)	ISYNA1 (ENSLCRG00005017110)	tpgs1 (ENSLCRG00005017107)	ENSLCRG00005017106	gna11b (ENSLCRG00005017097)	ENSLCRG00005017096 ##22	PLPP2 (ENSLCRG00005017095)	ENSLCRG00005017094	theg (ENSLCRG00005017093)	shda (ENSLCRG00005017092)	yju2 (ENSLCRG00005017090)	CARTPT (ENSLCRG00005017089)	ENSLCRG00005017088	ENSLCRG00005017087	ENSLCRG00005017085	GADD45B (ENSLCRG00005017084)	gng7 (ENSLCRG00005017083)	diras1b (ENSLCRG00005017082)	zgc:101744 (ENSLCRG00005017080)	ENSLCRG00005017079	ENSLCRG00005017078
Gilthead seabream	MODERN SPECIES	7	keap1a (ENSSAUG00010025753)	crlf1a (ENSSAUG00010025762)	odf3l2a (ENSSAUG00010025763)	ebi3 (ENSSAUG00010025764)	ENSSAUG00010025765	fam163ab (ENSSAUG00010025767)	NRDC (ENSSAUG00010025795)	SLITRK3 (ENSSAUG00010009809)	ENSSAUG00010009812	ENSSAUG00010009814	pdcd10a (ENSSAUG00010009819)	ISYNA1 (ENSSAUG00010009829)	tpgs1 (ENSSAUG00010009905)	ENSSAUG00010009906	gna11b (ENSSAUG00010009911)	chico (ENSSAUG00010009919) ##22	PLPP2 (ENSSAUG00010009920)	ENSSAUG00010009923	shda (ENSSAUG00010009926)	yju2 (ENSSAUG00010009928)	CARTPT (ENSSAUG00010009929)	ENSSAUG00010009930	ifi44c2 (ENSSAUG00010009932)	GADD45B (ENSSAUG00010009936)	gng7 (ENSSAUG00010009939)	diras1b (ENSSAUG00010009941)	zgc:101744 (ENSSAUG00010009943)	ENSSAUG00010009944	ENSSAUG00010009945	ENSSAUG00010009946	ENSSAUG00010009947
Ballan wrasse	MODERN SPECIES	353								ENSLBEG00000022466	ENSLBEG00000022427	ENSLBEG00000022409	pdcd10a (ENSLBEG00000022375)	ISYNA1 (ENSLBEG00000022329)	tpgs1 (ENSLBEG00000022316)	ENSLBEG00000022306	gna11b (ENSLBEG00000022279)	ENSLBEG00000022247 ##22	PLPP2 (ENSLBEG00000022221)	shda (ENSLBEG00000022182)	yju2 (ENSLBEG00000022144)	CARTPT (ENSLBEG00000022126)	ENSLBEG00000022075	GADD45B (ENSLBEG00000022030)	gng7 (ENSLBEG00000022010)	diras1b (ENSLBEG00000021999)	zgc:101744 (ENSLBEG00000021985)	slc1a8b (ENSLBEG00000021951)	ELAVL1 (ENSLBEG00000021924)	tspan37 (ENSLBEG00000021908)	YY1 (ENSLBEG00000021896)	degs2 (ENSLBEG00000021876)	evla (ENSLBEG00000021835)
Tetraodontidae	ANCESTRAL SPECIES	3	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b	ENSGT00940000172403	ENSGT01080000257344.a.b.b.a.b	ENSGT01030000234589.g.b	ENSGT01080000257344.a.a
Fugu	MODERN SPECIES	11	crlf1a (ENSTRUG00000015730)	odf3l2a (ENSTRUG00000015738)	ebi3 (ENSTRUG00000015744)	ENSTRUG00000021690	FAM163A (ENSTRUG00000020348)	NRDC (ENSTRUG00000015775)	SLITRK3 (ENSTRUG00000032942)	ENSTRUG00000031712	ENSTRUG00000015881	ENSTRUG00000000562	pdcd10a (ENSTRUG00000015882)	ISYNA1 (ENSTRUG00000015897)	tpgs1 (ENSTRUG00000015932)	ENSTRUG00000015936	gna11b (ENSTRUG00000021191)	chico (ENSTRUG00000015969) ##22	PLPP2 (ENSTRUG00000015990)	shda (ENSTRUG00000016015)	yju2 (ENSTRUG00000016034)	CARTPT (ENSTRUG00000027541)	ENSTRUG00000016047	ifi44c2 (ENSTRUG00000016083)	GADD45B (ENSTRUG00000020226)	gng7 (ENSTRUG00000016101)	diras1 (ENSTRUG00000029273)	ift20 (ENSTRUG00000021159)	zgc:101744 (ENSTRUG00000016106)	ENSTRUG00000027504	ENSTRUG00000031716	ENSTRUG00000032698	ENSTRUG00000032617
Ovalentaria	ANCESTRAL SPECIES	10	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.a	ENSGT00940000161517.D.d.b.r	ENSGT01030000234589.g.b
Ovalentaria_B	ANCESTRAL SPECIES	18	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT00940000172403	ENSGT00940000161517.D.d.b.q.b.a
Cichlidae	ANCESTRAL SPECIES	22	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Midas cichlid	MODERN SPECIES	231	keap1a (ENSACIG00000017236)	crlf1a (ENSACIG00000017261)	odf3l2a (ENSACIG00000017275)	ebi3 (ENSACIG00000017289)	ENSACIG00000017320	FAM163A (ENSACIG00000017386)	NRDC (ENSACIG00000017430)	SLITRK3 (ENSACIG00000017747)	ENSACIG00000017770	ENSACIG00000017785	pdcd10a (ENSACIG00000017807)	ISYNA1 (ENSACIG00000017814)	tpgs1 (ENSACIG00000017834)	ENSACIG00000017845	gna11b (ENSACIG00000017855)	ENSACIG00000017865 ##22	PLPP2 (ENSACIG00000017875)	shda (ENSACIG00000017884)	yju2 (ENSACIG00000017927)	ENSACIG00000017983	ENSACIG00000017992	ifi44c2 (ENSACIG00000018021)	GADD45B (ENSACIG00000018053)	gng7 (ENSACIG00000018091)	diras1b (ENSACIG00000018098)	zgc:101744 (ENSACIG00000018133)	ENSACIG00000018152	slc1a8b (ENSACIG00000018164)	ENSACIG00000018198	ELAVL1 (ENSACIG00000018226)	tspan37 (ENSACIG00000018243)
Pseudocrenilabrinae	ANCESTRAL SPECIES	8	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b.kb.b	ENSGT01080000257344.a.b.a.a.b.a.a	ENSGT00940000164644
Nile tilapia	MODERN SPECIES	10	ENSONIG00000001198	ENSONIG00000001192	FAM163A (ENSONIG00000031507)	NRDC (ENSONIG00000001167)	SLITRK3 (ENSONIG00000001162)	ENSONIG00000027821	ENSONIG00000038946	ENSONIG00000037991	ENSONIG00000029408	ENSONIG00000001160	pdcd10a (ENSONIG00000001157)	ISYNA1 (ENSONIG00000001155)	tpgs1 (ENSONIG00000001154)	ENSONIG00000001152	gna11b (ENSONIG00000001147)	ENSONIG00000040232 ##22	PLPP2 (ENSONIG00000001138)	ENSONIG00000039492	shda (ENSONIG00000001135)	yju2 (ENSONIG00000001132)	CARTPT (ENSONIG00000001130)	ENSONIG00000027296	ifi44c2 (ENSONIG00000001120)	GADD45B (ENSONIG00000001116)	gng7 (ENSONIG00000019235)	diras1b (ENSONIG00000001114)	zgc:101744 (ENSONIG00000001108)	ENSONIG00000033337	ENSONIG00000020739	ENSONIG00000029821	slc1a8b (ENSONIG00000001099)
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	6	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b.kb.b	ENSGT01080000257344.a.b.a.a.b.a.a	ENSGT00940000164644
Lyretail cichlid	DUPLICATION
Lyretail cichlid	MODERN SPECIES	346	odf3l2a (ENSNBRG00000022523)	ebi3 (ENSNBRG00000022506)	ENSNBRG00000022430	ENSNBRG00000022388	NRDC (ENSNBRG00000021922)	SLITRK3 (ENSNBRG00000021772)	ENSNBRG00000021735	ENSNBRG00000021701	pdcd10a (ENSNBRG00000021668)	ISYNA1 (ENSNBRG00000021636)	tpgs1 (ENSNBRG00000021616)	ENSNBRG00000021598	ENSNBRG00000021590	ENSNBRG00000021575	gna11b (ENSNBRG00000021559)	ENSNBRG00000021531 ##22	PLPP2 (ENSNBRG00000021515)	shda (ENSNBRG00000021501)	yju2 (ENSNBRG00000021486)	CARTPT (ENSNBRG00000021472)	ENSNBRG00000021391	ifi44c2 (ENSNBRG00000021369)	GADD45B (ENSNBRG00000021364)	gng7 (ENSNBRG00000021352)	diras1b (ENSNBRG00000021348)	zgc:101744 (ENSNBRG00000021332)	slc1a8b (ENSNBRG00000021307)	ELAVL1 (ENSNBRG00000021290)	tspan37 (ENSNBRG00000021226)	ENSNBRG00000020918	ENSNBRG00000020849
Lyretail cichlid	MODERN SPECIES	361	ENSNBRG00000000374	ENSNBRG00000000388	ENSNBRG00000000438	lpl (ENSNBRG00000000484)	ENSNBRG00000000496	malt2 (ENSNBRG00000000521)	mrpl54 (ENSNBRG00000000568)	fam32a (ENSNBRG00000000590)	fh (ENSNBRG00000000602)	hdgfl2 (ENSNBRG00000000615)	ap3d1 (ENSNBRG00000000657)	cdc34a (ENSNBRG00000000763)	C2CD4C (ENSNBRG00000000816)	gna15.4 (ENSNBRG00000000829)	gna11a (ENSNBRG00000000924)	ENSNBRG00000000937 ##22	ENSNBRG00000000969 ##22	ENSNBRG00000001048 ##22	ENSNBRG00000001072 ##22	plpp2b (ENSNBRG00000001095)	s1pr3a (ENSNBRG00000001112) ##18	shdb (ENSNBRG00000001137)	ENSNBRG00000001233 #26	ENSNBRG00000001319	shc2 (ENSNBRG00000001334)	cks2 (ENSNBRG00000001357)	odf3l2b (ENSNBRG00000001381)	ENSNBRG00000001409	ENSNBRG00000001455	foxe3 (ENSNBRG00000001468)	ENSNBRG00000001487
Haplochromini	ANCESTRAL SPECIES	7	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b.kb.b	ENSGT01080000257344.a.b.a.a.b.a.a.b.a.a	ENSGT00940000164644
Burton s mouthbrooder	MODERN SPECIES	929										ENSHBUG00000008479	pdcd10a (ENSHBUG00000008470)	ISYNA1 (ENSHBUG00000008448)	tpgs1 (ENSHBUG00000008406)	ENSHBUG00000008399	gna11b (ENSHBUG00000008386)	ENSHBUG00000008333 ##22	PLPP2 (ENSHBUG00000008282)	ENSHBUG00000008239	shda (ENSHBUG00000008226)	yju2 (ENSHBUG00000008210)	CARTPT (ENSHBUG00000008156)	ENSHBUG00000008143	ifi44c2 (ENSHBUG00000008124)	GADD45B (ENSHBUG00000008113)	gng7 (ENSHBUG00000008104)	diras1b (ENSHBUG00000008090)	zgc:101744 (ENSHBUG00000008077)	ENSHBUG00000008045	ENSHBUG00000008033	ENSHBUG00000008008	slc1a8b (ENSHBUG00000007949)
Haplochromini_A	ANCESTRAL SPECIES	7	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a	ENSGT00530000064359.c.b.o.b.a.a.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b.kb.b	ENSGT01080000257344.a.b.a.a.b.a.a.b.a.a	ENSGT00940000164644
Haplochromini_B	ANCESTRAL SPECIES	13	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.o.a.a	ENSGT00530000064359.c.b.o.b.a.a.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b.kb.b	ENSGT01080000257344.a.b.a.a.b.a.a.b.a.a	ENSGT00940000164644
Zebra mbuna	MODERN SPECIES	1101	keap1a (ENSMZEG00005000769)	crlf1a (ENSMZEG00005000757)	odf3l2a (ENSMZEG00005000732)	ebi3 (ENSMZEG00005000696)	ENSMZEG00005000686	ENSMZEG00005000678	NRDC (ENSMZEG00005000657)	SLITRK3 (ENSMZEG00005000625)	ENSMZEG00005000616	ENSMZEG00005000602	pdcd10a (ENSMZEG00005000561)	ISYNA1 (ENSMZEG00005000512)	tpgs1 (ENSMZEG00005000497)	ENSMZEG00005000492	gna11b (ENSMZEG00005000449)	ENSMZEG00005000395 ##22	PLPP2 (ENSMZEG00005000358)	ENSMZEG00005000351	shda (ENSMZEG00005000332)	yju2 (ENSMZEG00005000271)	CARTPT (ENSMZEG00005000241)	ENSMZEG00005000222	ifi44c2 (ENSMZEG00005000213)	GADD45B (ENSMZEG00005000203)	gng7 (ENSMZEG00005000178)	diras1b (ENSMZEG00005000164)	zgc:101744 (ENSMZEG00005000113)	ENSMZEG00005000071	ENSMZEG00005015784	slc1a8b (ENSMZEG00005015779)	ELAVL1 (ENSMZEG00005015772)
Eastern happy	MODERN SPECIES	10	ENSACLG00000010523	ENSACLG00000010514	ENSACLG00000010507	NRDC (ENSACLG00000010437)	SLITRK3 (ENSACLG00000010115)	ENSACLG00000010100	ENSACLG00000010084	ENSACLG00000010080	ENSACLG00000010079	ENSACLG00000010068	pdcd10a (ENSACLG00000010056)	ISYNA1 (ENSACLG00000010025)	tpgs1 (ENSACLG00000010012)	ENSACLG00000009993	gna11b (ENSACLG00000009973)	ENSACLG00000009962 ##22	PLPP2 (ENSACLG00000009950)	ENSACLG00000009521	shda (ENSACLG00000009516)	yju2 (ENSACLG00000009506)	CARTPT (ENSACLG00000009495)	ENSACLG00000009482	ifi44c2 (ENSACLG00000009420)	GADD45B (ENSACLG00000009408)	gng7 (ENSACLG00000009400)	diras1b (ENSACLG00000009388)	zgc:101744 (ENSACLG00000009365)	ENSACLG00000009358	ENSACLG00000009356	ENSACLG00000009354	slc1a8b (ENSACLG00000009341)
P. nyererei	DUPLICATION
P. nyererei	MODERN SPECIES	305	crlf1a (ENSPNYG00000014455)	odf3l2a (ENSPNYG00000014438)	ebi3 (ENSPNYG00000014420)	ENSPNYG00000014393	ENSPNYG00000014310	ENSPNYG00000014282	NRDC (ENSPNYG00000013827)	SLITRK3 (ENSPNYG00000013708)	ENSPNYG00000013669	ENSPNYG00000013631	pdcd10a (ENSPNYG00000013601)	ISYNA1 (ENSPNYG00000013569)	tpgs1 (ENSPNYG00000013558)	ENSPNYG00000013533	gna11b (ENSPNYG00000013482)	ENSPNYG00000013444 ##22	PLPP2 (ENSPNYG00000013415)	ENSPNYG00000013393	shda (ENSPNYG00000013375)	yju2 (ENSPNYG00000013361)	CARTPT (ENSPNYG00000013328)	ENSPNYG00000013227	ifi44c2 (ENSPNYG00000013106)	GADD45B (ENSPNYG00000013073)	gng7 (ENSPNYG00000013057)	diras1b (ENSPNYG00000013026)	zgc:101744 (ENSPNYG00000012996)	ENSPNYG00000012983	ENSPNYG00000012971	ENSPNYG00000012962	slc1a8b (ENSPNYG00000012820)
P. nyererei	MODERN SPECIES	351	ENSPNYG00000021929	ENSPNYG00000021941	lpl (ENSPNYG00000021951)	ENSPNYG00000021972	malt2 (ENSPNYG00000021980)	mrpl54 (ENSPNYG00000022006)	fam32a (ENSPNYG00000022016)	fh (ENSPNYG00000022025)	ENSPNYG00000022035	hdgfl2 (ENSPNYG00000022043)	ap3d1 (ENSPNYG00000022090)	cdc34a (ENSPNYG00000022149)	C2CD4C (ENSPNYG00000022160)	gna15.4 (ENSPNYG00000022166)	gna11a (ENSPNYG00000022196)	ENSPNYG00000022222 ##22	ENSPNYG00000022243 ##22	ENSPNYG00000022295 ##22	plpp2b (ENSPNYG00000022351)	mier2 (ENSPNYG00000022358)	s1pr3a (ENSPNYG00000022370) ##18	shdb (ENSPNYG00000022375)	ENSPNYG00000022388 #26	shc2 (ENSPNYG00000022410)	cks2 (ENSPNYG00000022429)	odf3l2b (ENSPNYG00000022439)	ENSPNYG00000022446	ENSPNYG00000022457	ENSPNYG00000022466	ENSPNYG00000022478	foxe3 (ENSPNYG00000022486)
Pomacentridae	ANCESTRAL SPECIES	19	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.a.a.b.a.b
Bicolor damselfish	MODERN SPECIES	1121								NRDC (ENSSPAG00000020855)	SLITRK3 (ENSSPAG00000020823)	ENSSPAG00000020788	pdcd10a (ENSSPAG00000020768)	ISYNA1 (ENSSPAG00000020746)	tpgs1 (ENSSPAG00000020731)	ENSSPAG00000020722	gna11b (ENSSPAG00000020689)	ENSSPAG00000020669 ##22	PLPP2 (ENSSPAG00000020647)
Pomacentridae_A	ANCESTRAL SPECIES	19	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.a.a.b.a.b
Spiny chromis	MODERN SPECIES	1077												ISYNA1 (ENSAPOG00000001565)	tpgs1 (ENSAPOG00000001553)	ENSAPOG00000000977	gna11b (ENSAPOG00000000015)	ENSAPOG00000000928 ##22	PLPP2 (ENSAPOG00000001535)	ENSAPOG00000001528	theg (ENSAPOG00000001520)	shda (ENSAPOG00000001513)	yju2 (ENSAPOG00000001505)	CARTPT (ENSAPOG00000001500)	ENSAPOG00000001497	ifi44c2 (ENSAPOG00000000010)	GADD45B (ENSAPOG00000001477)	gng7 (ENSAPOG00000001473)	diras1b (ENSAPOG00000001469)	zgc:101744 (ENSAPOG00000001465)
Amphiprion	ANCESTRAL SPECIES	12	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000161517.D.d.b.q.a.h.a	ENSGT01080000257344.a.b.a.b.b	ENSGT01080000257344.a.b.a.a.b.a.b.b	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.b.a.b
Clown anemonefish	MODERN SPECIES	767	ABCA3 (ENSAOCG00000002140)	ccnf (ENSAOCG00000010568)	ENSAOCG00000010548	HMOX2 (ENSAOCG00000010530)	dnaja3a (ENSAOCG00000010515)	ENSAOCG00000010486	FAM163A (ENSAOCG00000010345)	NRDC (ENSAOCG00000010289)	SLITRK3 (ENSAOCG00000009861)	si:dkey-56i24.1 (ENSAOCG00000009845)	pdcd10a (ENSAOCG00000009829)	ISYNA1 (ENSAOCG00000009805)	tpgs1 (ENSAOCG00000009772)	ENSAOCG00000009769	gna11b (ENSAOCG00000009750)	ENSAOCG00000009710 ##22	PLPP2 (ENSAOCG00000009684)
Orange clownfish	MODERN SPECIES	9	SSBP4 (ENSAPEG00000013777)	keap1a (ENSAPEG00000013761)	crlf1a (ENSAPEG00000013716)	odf3l2a (ENSAPEG00000013678)	ebi3 (ENSAPEG00000013656)	ENSAPEG00000013644	FAM163A (ENSAPEG00000013635)	NRDC (ENSAPEG00000013447)	SLITRK3 (ENSAPEG00000013403)	si:dkey-56i24.1 (ENSAPEG00000013397)	pdcd10a (ENSAPEG00000013367)	ISYNA1 (ENSAPEG00000013327)	tpgs1 (ENSAPEG00000013321)	ENSAPEG00000013315	gna11b (ENSAPEG00000013281)	ENSAPEG00000013253 ##22	PLPP2 (ENSAPEG00000013247)	ENSAPEG00000013238	shda (ENSAPEG00000013205)	yju2 (ENSAPEG00000013193)	CARTPT (ENSAPEG00000013149)	ENSAPEG00000013056	ifi44c2 (ENSAPEG00000012978)	gng7 (ENSAPEG00000012952)	diras1b (ENSAPEG00000012942)	zgc:101744 (ENSAPEG00000012921)	ENSAPEG00000012905	ENSAPEG00000012898	slc1a8b (ENSAPEG00000012859)	ELAVL1 (ENSAPEG00000012830)	tspan37 (ENSAPEG00000012805)
Atherinomorphae	ANCESTRAL SPECIES	11	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT00940000172403	ENSGT00940000161517.D.d.b.q.a
Cyprinodontiformes	ANCESTRAL SPECIES	21	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Aplocheiloidei	ANCESTRAL SPECIES	15	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Turquoise killifish	MODERN SPECIES	1625	crlf1a (ENSNFUG00015016783)	odf3l2a (ENSNFUG00015016798)	EBI3 (ENSNFUG00015016805)	ENSNFUG00015016809	FAM163A (ENSNFUG00015016816)	NRD1 (ENSNFUG00015017003)	ENSNFUG00015019951	SLITRK3 (ENSNFUG00015019956)	ENSNFUG00015019961	PDCD10B (ENSNFUG00015019977)	ISYNA1 (ENSNFUG00015020013)	TPGS1 (ENSNFUG00015020029)	CABZ01085657.1 (ENSNFUG00015020034)	ENSNFUG00015020039	gna11b (ENSNFUG00015020047)	ENSNFUG00015020083 ##22	PPAP2C (ENSNFUG00015020095)	ENSNFUG00015020103	theg (ENSNFUG00015020107)	SHDA (ENSNFUG00015020113)	CCDC94 (ENSNFUG00015020119)	CARTPT (ENSNFUG00015020120)	MAP1S (ENSNFUG00015020125)	ENSNFUG00015020141	ENSNFUG00015020211	SUMO3B (ENSNFUG00015020217)	TSPEAR (ENSNFUG00015020224)	USP40 (ENSNFUG00015020236)	FABP7A (ENSNFUG00015020247)	ENSNFUG00015020256	ENSNFUG00015020269
Mangrove rivulus	MODERN SPECIES	1	crlf1a (ENSKMAG00000013097)	odf3l2a (ENSKMAG00000013139)	ebi3 (ENSKMAG00000013174)	ENSKMAG00000013185	FAM163A (ENSKMAG00000013206)	NRDC (ENSKMAG00000013225)	SLITRK3 (ENSKMAG00000013297)	ENSKMAG00000013350	ENSKMAG00000013377	ENSKMAG00000013408	pdcd10a (ENSKMAG00000013442)	ISYNA1 (ENSKMAG00000013477)	tpgs1 (ENSKMAG00000013512)	ENSKMAG00000013522	gna11b (ENSKMAG00000013554)	ENSKMAG00000013641 ##22	PLPP2 (ENSKMAG00000013711)	shda (ENSKMAG00000013744)	yju2 (ENSKMAG00000013772)	CARTPT (ENSKMAG00000013787)	ENSKMAG00000013805	ifi44c2 (ENSKMAG00000013818)	GADD45B (ENSKMAG00000013838)	gng7 (ENSKMAG00000013879)	diras1b (ENSKMAG00000013901)	zgc:101744 (ENSKMAG00000013913)	ENSKMAG00000013939	ENSKMAG00000013963	slc1a8b (ENSKMAG00000013996)	ELAVL1 (ENSKMAG00000014042)	tspan37 (ENSKMAG00000014087)
Cyprinodontoidei	ANCESTRAL SPECIES	8	ENSGT00950000183049.C.a.b	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Poeciliinae	ANCESTRAL SPECIES	8	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p.e	ENSGT00530000064359.c.b.p.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.a.c	ENSGT01030000234589.g.b	ENSGT01080000257344.a.b.a.b.b
Poecilia	ANCESTRAL SPECIES	10	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p.e.b	ENSGT00530000064359.c.b.p.f	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT00940000172403	ENSGT00940000163478
NAME_6	ANCESTRAL SPECIES	3	ENSGT00940000165458	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p.e.b	ENSGT00530000064359.c.b.p.e.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.a.c.b.b	ENSGT00940000164644	ENSGT00940000155528.t.d.b
Sailfin molly	MODERN SPECIES	254								SLITRK3 (ENSPLAG00000007670)	ENSPLAG00000007689	ENSPLAG00000007737	pdcd10a (ENSPLAG00000007783)	ISYNA1 (ENSPLAG00000007812)	tpgs1 (ENSPLAG00000007824)	ENSPLAG00000007848	gna11b (ENSPLAG00000007878)	ENSPLAG00000007905 ##22	PLPP2 (ENSPLAG00000007920)	ENSPLAG00000007929	shda (ENSPLAG00000007939)	yju2 (ENSPLAG00000007951)	CARTPT (ENSPLAG00000007964)	MAP1S (ENSPLAG00000007979)	ifi44c2 (ENSPLAG00000007998)	GADD45B (ENSPLAG00000008005)	gng7 (ENSPLAG00000008009)	diras1b (ENSPLAG00000008028)	zgc:101744 (ENSPLAG00000008054)	ENSPLAG00000008068	ENSPLAG00000008076	slc1a8b (ENSPLAG00000008114)	ENSPLAG00000008127
Amazon molly	MODERN SPECIES	410											pdcd10a (ENSPFOG00000014625)	ISYNA1 (ENSPFOG00000014524)	tpgs1 (ENSPFOG00000014505)	ENSPFOG00000014496	gna11b (ENSPFOG00000014467)	ENSPFOG00000014441 ##22	PLPP2 (ENSPFOG00000014394)	ENSPFOG00000021662	theg (ENSPFOG00000022143)	shda (ENSPFOG00000014354)	yju2 (ENSPFOG00000014352)	CARTPT (ENSPFOG00000014347)	ENSPFOG00000014321	ifi44c2 (ENSPFOG00000014250)	GADD45B (ENSPFOG00000014239)	gng7 (ENSPFOG00000014231)	diras1b (ENSPFOG00000014226)	zgc:101744 (ENSPFOG00000014211)	ENSPFOG00000021774	slc1a8b (ENSPFOG00000014150)	ENSPFOG00000014116
Guppy	MODERN SPECIES	198																ENSPREG00000015126 ##22
Platyfish	MODERN SPECIES	10	odf3l2a (ENSXMAG00000023708)	ebi3 (ENSXMAG00000006449)	ENSXMAG00000021978	FAM163A (ENSXMAG00000026439)	NRDC (ENSXMAG00000010081)	SLITRK3 (ENSXMAG00000025152)	ENSXMAG00000024177	ENSXMAG00000018554	ENSXMAG00000027792	ENSXMAG00000021791	pdcd10a (ENSXMAG00000010125)	ISYNA1 (ENSXMAG00000010138)	tpgs1 (ENSXMAG00000023659)	ENSXMAG00000029144	gna11b (ENSXMAG00000010151)	ENSXMAG00000009418 ##22	PLPP2 (ENSXMAG00000009408)	ENSXMAG00000009406	shda (ENSXMAG00000010169)	yju2 (ENSXMAG00000010177)	CARTPT (ENSXMAG00000010184)	ENSXMAG00000024636	ifi44c2 (ENSXMAG00000010193)	GADD45B (ENSXMAG00000028113)	gng7 (ENSXMAG00000002696)	diras1b (ENSXMAG00000010203)	zgc:101744 (ENSXMAG00000010208)	ENSXMAG00000019913	ENSXMAG00000026848	ENSXMAG00000022393	ENSXMAG00000022424
NAME_4	ANCESTRAL SPECIES	183										ENSGT00530000064359.c.b.p	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00940000163581.f.b	ENSGT00950000182964.a.b.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915.b	ENSGT00940000167061	ENSGT01080000257344.a.b.a.b.b	ENSGT00940000164644	ENSGT00940000155528.t.d.b	ENSGT00940000154954.ob
Mummichog	MODERN SPECIES	497										si:dkey-56i24.1 (ENSFHEG00000010223)	pdcd10a (ENSFHEG00000010213)	ISYNA1 (ENSFHEG00000010163)	tpgs1 (ENSFHEG00000010136)	ENSFHEG00000010126	gna11b (ENSFHEG00000010098)	ENSFHEG00000010035 ##22	PLPP2 (ENSFHEG00000009996)	ENSFHEG00000009978	shda (ENSFHEG00000009960)	yju2 (ENSFHEG00000009915)	CARTPT (ENSFHEG00000009903)	ENSFHEG00000009883	ifi44c2 (ENSFHEG00000009844)	GADD45B (ENSFHEG00000009822)	gng7 (ENSFHEG00000009816)	diras1b (ENSFHEG00000009800)	zgc:101744 (ENSFHEG00000009761)
Sheepshead minnow	MODERN SPECIES	1122											pdcd10a (ENSCVAG00000007335)	ISYNA1 (ENSCVAG00000007304)	tpgs1 (ENSCVAG00000007266)	ENSCVAG00000007260	gna11b (ENSCVAG00000007254)	ENSCVAG00000007218 ##22	PLPP2 (ENSCVAG00000007175)	ENSCVAG00000007167	ENSCVAG00000007147	ENSCVAG00000007132	shda (ENSCVAG00000007115)	ENSCVAG00000007101	ENSCVAG00000007092
Oryzias	ANCESTRAL SPECIES	3	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p.g.b	ENSGT00530000064359.c.b.p.g.a.b	ENSGT00530000064359.c.b.p.g.a.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00950000182964.a.b.b.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504	ENSGT00940000155115.a.b	ENSGT00940000165326	ENSGT00390000017418	ENSGT00940000159314
Oryzias_b	ANCESTRAL SPECIES	12	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p.g.b	ENSGT00530000064359.c.b.p.g.a.b.a	ENSGT00530000064359.c.b.p.g.a.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00950000182964.a.b.b.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504	ENSGT00940000155115.a.b	ENSGT00940000165326	ENSGT00390000017418	ENSGT00940000159314	ENSGT00940000159599
Javanese ricefish	MODERN SPECIES	14	keap1a (ENSOJAG00000017350)	crlf1a (ENSOJAG00000017298)	odf3l2a (ENSOJAG00000017270)	ebi3 (ENSOJAG00000017263)	ENSOJAG00000017245	ENSOJAG00000017239	NRDC (ENSOJAG00000015160)	SLITRK3 (ENSOJAG00000015023)	ENSOJAG00000015013	ENSOJAG00000014997	pdcd10a (ENSOJAG00000014883)	ISYNA1 (ENSOJAG00000014717)	tpgs1 (ENSOJAG00000014704)	ENSOJAG00000014659	gna11b (ENSOJAG00000014571)	ENSOJAG00000014558 ##22	PLPP2 (ENSOJAG00000022459)	ENSOJAG00000022454	theg (ENSOJAG00000022451)	shda (ENSOJAG00000022449)	yju2 (ENSOJAG00000022444)	CARTPT (ENSOJAG00000022433)	ENSOJAG00000022414	GADD45B (ENSOJAG00000022379)	ythdf2 (ENSOJAG00000022360)	ENSOJAG00000022344	id3 (ENSOJAG00000022336)	ENSOJAG00000022328	asap3 (ENSOJAG00000022208)	ENSOJAG00000022175	rps6ka1 (ENSOJAG00000022134)
Indian medaka	MODERN SPECIES		ebi3 (ENSOMEG00000012120)	ENSOMEG00000012110	ENSOMEG00000012098	NRDC (ENSOMEG00000012069)	SLITRK3 (ENSOMEG00000011935)	ENSOMEG00000011921	ENSOMEG00000011886	ENSOMEG00000011860	ENSOMEG00000011854	ENSOMEG00000011826	pdcd10a (ENSOMEG00000011804)	ISYNA1 (ENSOMEG00000011762)	tpgs1 (ENSOMEG00000011672)	ENSOMEG00000011651	gna11b (ENSOMEG00000011619)	ENSOMEG00000011582 ##22	PLPP2 (ENSOMEG00000011563)	ENSOMEG00000011548	shda (ENSOMEG00000011520)	yju2 (ENSOMEG00000011494)	CARTPT (ENSOMEG00000011472)	ENSOMEG00000011456	GADD45B (ENSOMEG00000011414)	ythdf2 (ENSOMEG00000011398)	ENSOMEG00000011324	id3 (ENSOMEG00000011276)	ENSOMEG00000011261	ENSOMEG00000011231	ENSOMEG00000011211	asap3 (ENSOMEG00000011189)	ENSOMEG00000011137
Oryzias_a	ANCESTRAL SPECIES	11	ENSGT00940000156569.a.b.a	ENSGT00940000160480.c.b	ENSGT00940000160050	ENSGT00940000154611.ad.a	ENSGT00940000159228.a.b	ENSGT00940000155026.c	ENSGT00940000158681.b	ENSGT00530000064359.c.b.p.g.b.a	ENSGT00530000064359.c.b.p.g.a.b	ENSGT00530000064359.c.b.p.g.a.a	ENSGT00390000017913.`b.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00940000163250.C	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.b ##22	ENSGT00940000155885.a	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00390000018319.a.b.b.b.a.b	ENSGT00940000160221.d	ENSGT00950000182964.a.b.b.b	ENSGT00940000156761	ENSGT00940000167209	ENSGT00940000160504	ENSGT00940000155115.a.b	ENSGT00940000165326	ENSGT00390000017418	ENSGT00940000159314	ENSGT00940000159599
Chinese medaka	MODERN SPECIES	21	crlf1a (ENSOSIG00000004712)	odf3l2a (ENSOSIG00000004701)	ebi3 (ENSOSIG00000004696)	ENSOSIG00000004694	ENSOSIG00000004691	NRDC (ENSOSIG00000003121)	SLITRK3 (ENSOSIG00000003064)	ENSOSIG00000003058	ENSOSIG00000003052	pdcd10b (ENSOSIG00000003038)	ISYNA1 (ENSOSIG00000002649)	ENSOSIG00000002627	tpgs1 (ENSOSIG00000002617)	ENSOSIG00000002606	gna11b (ENSOSIG00000001874)	ENSOSIG00000001796 ##22	PLPP2 (ENSOSIG00000001755)	ENSOSIG00000001720	theg (ENSOSIG00000001700)	shda (ENSOSIG00000001654)	yju2 (ENSOSIG00000001587)	CARTPT (ENSOSIG00000021610)	ENSOSIG00000021613	GADD45B (ENSOSIG00000021592)	ythdf2 (ENSOSIG00000021578)	ENSOSIG00000021575	id3 (ENSOSIG00000021573)	ENSOSIG00000021569	ENSOSIG00000021568	ENSOSIG00000021567	rps6ka1 (ENSOSIG00000021288)
Japanese Medaka HdrR	MODERN SPECIES	14	odf3l2a (ENSORLG00000014016)	ebi3 (ENSORLG00000023498)	ENSORLG00000014028	ENSORLG00000022510	NRDC (ENSORLG00000014051)	ENSORLG00000014064	ENSORLG00000025053	ENSORLG00000014068	ENSORLG00000027988	ENSORLG00000025778	pdcd10a (ENSORLG00000022553)	ISYNA1 (ENSORLG00000014091)	tpgs1 (ENSORLG00000014098)	ENSORLG00000014104	gna11b (ENSORLG00000014137)	ENSORLG00000014199 ##22	ENSORLG00000014235	ENSORLG00000025509	shda (ENSORLG00000014252)	yju2 (ENSORLG00000014275)	ENSORLG00000026133	ENSORLG00000028835	ENSORLG00000022536	ythdf2 (ENSORLG00000014323)	ENSORLG00000030369	id3 (ENSORLG00000023230)	ENSORLG00000014356	asap3 (ENSORLG00000014389)	ENSORLG00000014391	rps6ka1 (ENSORLG00000014406)	cnksr1 (ENSORLG00000014435)
Pinecone sodierfish	DUPLICATION
Pinecone sodierfish	MODERN SPECIES	14	ENSMMDG00005023093	SSBP4 (ENSMMDG00005023090)	keap1a (ENSMMDG00005023068)	crlf1a (ENSMMDG00005023064)	odf3l2a (ENSMMDG00005023063)	ebi3 (ENSMMDG00005023061)	ENSMMDG00005023057	FAM163A (ENSMMDG00005023053)	NRDC (ENSMMDG00005020353)	SLITRK3 (ENSMMDG00005020206)	ENSMMDG00005020203	PDCD10 (ENSMMDG00005020200)	ISYNA1 (ENSMMDG00005020171)	ENSMMDG00005020160	gna11b (ENSMMDG00005020142)	ENSMMDG00005020135 ##22	PLPP2 (ENSMMDG00005020133)	shda (ENSMMDG00005020132)	yju2 (ENSMMDG00005020128)	CARTPT (ENSMMDG00005020125)	ENSMMDG00005020123	ifi44c2 (ENSMMDG00005020120)	GADD45B (ENSMMDG00005020115)	gng7 (ENSMMDG00005020114)	diras1b (ENSMMDG00005020109)	zgc:101744 (ENSMMDG00005020107)	ENSMMDG00005020105	ENSMMDG00005020104	ENSMMDG00005020100	ENSMMDG00005020098	ENSMMDG00005020096
Pinecone sodierfish	MODERN SPECIES	18	ENSMMDG00005013811	tpm4a (ENSMMDG00005013641)	ENSMMDG00005012786	ENSMMDG00005012750	lpl (ENSMMDG00005012484)	safb (ENSMMDG00005012474)	malt2 (ENSMMDG00005012465)	mrpl54 (ENSMMDG00005012456)	fam32a (ENSMMDG00005012453)	hdgfl2 (ENSMMDG00005012445)	ap3d1 (ENSMMDG00005012396)	cdc34a (ENSMMDG00005012387)	C2CD4C (ENSMMDG00005012384)	gna15.4 (ENSMMDG00005012378)	gna11a (ENSMMDG00005012287)	ENSMMDG00005012281 ##22	ENSMMDG00005012279 ##22	ENSMMDG00005012276 ##22	ENSMMDG00005012274 ##22	ENSMMDG00005012272 ##22	plpp2b (ENSMMDG00005012268)	mier2 (ENSMMDG00005012265)	s1pr3a (ENSMMDG00005012263) ##18	shdb (ENSMMDG00005012259)	ENSMMDG00005012254	ENSMMDG00005012250	shc2 (ENSMMDG00005012246)	cks2 (ENSMMDG00005012243)	odf3l2b (ENSMMDG00005012241)	ENSMMDG00005012236	ENSMMDG00005012235
Reedfish	MODERN SPECIES	3	keap1a (ENSECRG00000020780)	tmem59l (ENSECRG00000020800)	crlf1b (ENSECRG00000020819)	rex1bd (ENSECRG00000020832)	ENSECRG00000020849	ENSECRG00000020868	odf3l2a (ENSECRG00000014440)	cks2 (ENSECRG00000014512)	shc2 (ENSECRG00000014647)	ENSECRG00000014936	ENSECRG00000014959	cdc34a (ENSECRG00000014989)	C2CD4C (ENSECRG00000015075)	gna15.4 (ENSECRG00000015176)	ENSECRG00000015984	chico (ENSECRG00000016025) ##22	ENSECRG00000016073 ##22	ENSECRG00000016127 ##22	plpp2b (ENSECRG00000016162)	mier2 (ENSECRG00000016219)	s1pr3a (ENSECRG00000016260) ##18	ENSECRG00000016294	cactin (ENSECRG00000016403)	ENSECRG00000016441	SCAMP4 (ENSECRG00000016465)	rorca (ENSECRG00000016641)	ENSECRG00000016702	abhd17aa (ENSECRG00000016735)	zgc:153115 (ENSECRG00000016793)	ap3d1 (ENSECRG00000016874)	DOT1L (ENSECRG00000017121)
Sarcopterygii	ANCESTRAL SPECIES	66													ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00390000014361	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162161.A
Coelacanth	MODERN SPECIES	752														S1PR4 (ENSLACG00000014931) #18	GNA11 (ENSLACG00000014531) #20	chico (ENSLACG00000014291) ##22	ENSLACG00000013482 ##22	ENSLACG00000013247 ##22	PLPP2 (ENSLACG00000012456)	ENSLACG00000012183	MIER2 (ENSLACG00000011464)	theg (ENSLACG00000011058)	ENSLACG00000010833	C2CD4C (ENSLACG00000009520)	mfsd14a2 (ENSLACG00000008171)	ODF3L2 (ENSLACG00000007940)	shc2 (ENSLACG00000007045)	TPGS1 (ENSLACG00000006501)	cdc34a (ENSLACG00000006122)	ENSLACG00000005841	BSG (ENSLACG00000005258)
Tetrapoda	ANCESTRAL SPECIES	55						ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00960000189417	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Anura	ANCESTRAL SPECIES	252								ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885
Leishan spiny toad	DUPLICATION
Leishan spiny toad	MODERN SPECIES	6	ENSLLEG00000004470	ENSLLEG00000004463	DUSP26 (ENSLLEG00000004460)	ENSLLEG00000004455	UNC5D (ENSLLEG00000004400)	ENSLLEG00000019438	ENSLLEG00000019390	ENSLLEG00000019341	ENSLLEG00000019308	ENSLLEG00000019292	ZNF703 (ENSLLEG00000019247)	ERLIN2 (ENSLLEG00000018929)	PLPBP (ENSLLEG00000018649)	ADGRA2 (ENSLLEG00000018474)	RAB11FIP1 (ENSLLEG00000018288)	ENSLLEG00000018249 ##22	ENSLLEG00000018226	ENSLLEG00000018205	ADRA1A (ENSLLEG00000018159)	FAH (ENSLLEG00000017884)	ZFAND6 (ENSLLEG00000017711)	ENSLLEG00000017685	MTHFS (ENSLLEG00000017637)	MINAR1 (ENSLLEG00000017554)	ENSLLEG00000017508	RASGRF1 (ENSLLEG00000016462)	ENSLLEG00000016266	ENSLLEG00000016191	ENSLLEG00000015807	ENSLLEG00000015772	FRMD5 (ENSLLEG00000015430)
Leishan spiny toad	MODERN SPECIES		TRMT10B (ENSLLEG00000002766)	ENSLLEG00000002781	ENSLLEG00000002830	ENSLLEG00000002794	ENSLLEG00000000040	ENSLLEG00000000054	CELF5 (ENSLLEG00000000082) #16	ENSLLEG00000000101	NCLN (ENSLLEG00000000134) #17	S1PR4 (ENSLLEG00000000226) #18	ENSLLEG00000000238	GNA15 (ENSLLEG00000000251) #19	ENSLLEG00000000261	GNA11 (ENSLLEG00000000271) #20	ENSLLEG00000000285	ENSLLEG00000000311 ##22	ENSLLEG00000000369 ##22	ENSLLEG00000000445	PLPP2 (ENSLLEG00000000455)	ENSLLEG00000000470	BTBD2 (ENSLLEG00000000483)	SCAMP4 (ENSLLEG00000000600)	ENSLLEG00000000617	ENSLLEG00000000653	ENSLLEG00000000661	ENSLLEG00000000671	ENSLLEG00000000685	REXO1 (ENSLLEG00000000743)	ENSLLEG00000000773	ENSLLEG00000000786	ENSLLEG00000000872
Frog	MODERN SPECIES		ENSXETG00000044227	ENSXETG00000043837	ptgr1.4 (ENSXETG00000031127)	ptgr1.3 (ENSXETG00000037321)	ENSXETG00000046913	ENSXETG00000045296	tmem215 (ENSXETG00000014727)	ndufb6 (ENSXETG00000014726)	ENSXETG00000037169	topors (ENSXETG00000014724)	igfbpl1 (ENSXETG00000014721)	aldh1b1 (ENSXETG00000014720)	ENSXETG00000043617	shb (ENSXETG00000014718)	gna11 (ENSXETG00000014367) #20	tle5 (ENSXETG00000014365) ##22	tle2 (ENSXETG00000014353) ##22	plpp2 (ENSXETG00000026886)	ncln (ENSXETG00000014348) #17	s1pr4 (ENSXETG00000044238) #18	celf5 (ENSXETG00000014344) #16	hsd11b1l (ENSXETG00000014342)	micos13 (ENSXETG00000039864)	sugp2 (ENSXETG00000030450)	armc6 (ENSXETG00000014338)	slc25a42 (ENSXETG00000014336)	tmem161a (ENSXETG00000014335)	tmem221 (ENSXETG00000036930)	tm6sf2 (ENSXETG00000014331)	hapln4 (ENSXETG00000014330)	ncan (ENSXETG00000014328)
Amniota	ANCESTRAL SPECIES	23	ENSGT00940000153617.A.b	ENSGT00940000163061	ENSGT01010000222912	ENSGT01090000261062	ENSGT00940000155916	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000153617.A.b	ENSGT00940000163061.a.a	ENSGT01090000261062	ENSGT00940000155916	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Lepidosauria	ANCESTRAL SPECIES	33	ENSGT00940000159248	ENSGT00940000153617.A.b	ENSGT00940000163061.a.a	ENSGT01010000222912	ENSGT01090000261062	ENSGT00940000155916	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Episquamata	ANCESTRAL SPECIES	18	ENSGT00960000189368	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.b	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00390000008296.a	ENSGT00940000159248	ENSGT00940000153617.A.b	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050
Elapidae	ANCESTRAL SPECIES	7	ENSGT00390000008296.a	ENSGT00940000159248	ENSGT00940000153617.A.b.b	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736.a #19	ENSGT00940000161736.b #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050
Elapidae_a	ANCESTRAL SPECIES	9		ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.b	ENSGT01010000225861	ENSGT00940000161736.a #19	ENSGT00940000161736.b #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a.m ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00960000189417	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946
Acanthophiinae	ANCESTRAL SPECIES	9						ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00390000002629	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736.b #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a.m ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000159946	ENSGT00940000158050	ENSGT00390000009230
Mainland tiger snake	MODERN SPECIES	463										NCLN (ENSNSUG00000015115) #17	S1PR4 (ENSNSUG00000015114) #18	ENSNSUG00000015113	ENSNSUG00000015112	GNA15 (ENSNSUG00000015111) #19	GNA11 (ENSNSUG00000015110) #20	ENSNSUG00000015109 ##22
Eastern brown snake	MODERN SPECIES	10								ENSPTXG00000000715	ENSPTXG00000000713	SAFB (ENSPTXG00000000696)	ENSPTXG00000000650 #16	NCLN (ENSPTXG00000000643) #17	S1PR4 (ENSPTXG00000000636) #18	GNA11 (ENSPTXG00000000632) #20	ENSPTXG00000000629	ENSPTXG00000000625 ##22	ENSPTXG00000000622 ##22	ENSPTXG00000000618 ##22	ENSPTXG00000000556 ##22	PLPP2 (ENSPTXG00000000527)	MIER2 (ENSPTXG00000000478)	C2CD4C (ENSPTXG00000000452)	ENSPTXG00000000407	ODF3L2 (ENSPTXG00000000378)	TPGS1 (ENSPTXG00000000368)	CDC34 (ENSPTXG00000000358)	BSG (ENSPTXG00000000335)	ENSPTXG00000000325	POLRMT (ENSPTXG00000000299)	SBNO2 (ENSPTXG00000000275)	STK11 (ENSPTXG00000000255)
Blue-lipped sea krait	MODERN SPECIES	1337															GNA11 (ENSLLTG00000004099) #20	ENSLLTG00000004088 ##22
Laterata	ANCESTRAL SPECIES	57											ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.b	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946
Argentine black and white tegu	MODERN SPECIES	109	GNA11 (ENSSMRG00000017747) #20	GNA15 (ENSSMRG00000017742) #19	ENSSMRG00000017736	ENSSMRG00000017730	S1PR4 (ENSSMRG00000017729) #18	BSG (ENSSMRG00000017728)	CELF5 (ENSSMRG00000017696) #16	NCLN (ENSSMRG00000017695) #17	CREB3L3 (ENSSMRG00000017694)	FSD1 (ENSSMRG00000017693)	STAP2 (ENSSMRG00000017692)	MPND (ENSSMRG00000017691)	SH3GL1 (ENSSMRG00000017688)	CHAF1A (ENSSMRG00000017687)	UBXN6 (ENSSMRG00000017685)	ENSSMRG00000017683 ##22	ENSSMRG00000017678 ##22	ENSSMRG00000017675 ##22	PLPP2 (ENSSMRG00000017674)	MIER2 (ENSSMRG00000017673)	C2CD4C (ENSSMRG00000017672)	ENSSMRG00000017671	ODF3L2 (ENSSMRG00000017670)	ENSSMRG00000017667	TPGS1 (ENSSMRG00000017666)	CDC34 (ENSSMRG00000017665)	MICOS13 (ENSSMRG00000017664)	ENSSMRG00000017662	ENSSMRG00000017649	ENSSMRG00000017648	ENSSMRG00000017647
tuatara	MODERN SPECIES	1127	ARRDC5 (ENSSPUG00000010267)	ENSSPUG00000010032	KDM4B (ENSSPUG00000009943)	PTPRS (ENSSPUG00000009885)	ENSSPUG00000009844	ENSSPUG00000009820	ENSSPUG00000009747	MICOS13 (ENSSPUG00000009724)	HSD11B1L (ENSSPUG00000009709)	CELF5 (ENSSPUG00000009687) #16	NCLN (ENSSPUG00000009665) #17	S1PR4 (ENSSPUG00000009653) #18	ENSSPUG00000009643	GNA15 (ENSSPUG00000009627) #19	GNA11 (ENSSPUG00000009599) #20	ENSSPUG00000009560 ##22	ENSSPUG00000009539 ##22	ENSSPUG00000009517 ##22	ENSSPUG00000009464 ##22	MIER2 (ENSSPUG00000009426)	C2CD4C (ENSSPUG00000009416)	ENSSPUG00000009380	ODF3L2 (ENSSPUG00000009362)	ENSSPUG00000009338	TPGS1 (ENSSPUG00000009325)	CDC34 (ENSSPUG00000009314)	BSG (ENSSPUG00000009303)	HCN2 (ENSSPUG00000009220)	ENSSPUG00000009181	ENSSPUG00000009159	FGF22 (ENSSPUG00000009145)
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Archosauria	ANCESTRAL SPECIES	16	ENSGT00940000163061.a.b.a	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Aves	ANCESTRAL SPECIES	20				ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Neognathae	ANCESTRAL SPECIES	21					ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Galloanserae	ANCESTRAL SPECIES	20						ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00940000159004	ENSGT00950000186319	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000155347.b	ENSGT00940000154929.B	ENSGT00950000182916.a.a #15	ENSGT00500000044957 #13	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00940000165115	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7
Japanese quail	MODERN SPECIES	20	ZBTB7A (ENSCJPG00005009777)	YJU2 (ENSCJPG00005009776)	SHD (ENSCJPG00005009775)	ENSCJPG00005009774	FSD1 (ENSCJPG00005009773)	ENSCJPG00005009767	ENSCJPG00005009765	MICOS13 (ENSCJPG00005009764)	HSD11B1L (ENSCJPG00005009762)	CELF5 (ENSCJPG00005009760) #16	ENSCJPG00005009758	NCLN (ENSCJPG00005009756) #17	S1PR4 (ENSCJPG00005009755) #18	ENSCJPG00005009736	GNA11 (ENSCJPG00005009735) #20	ENSCJPG00005009732 ##22	ENSCJPG00005009720 ##22	ENSCJPG00005009719	ENSCJPG00005009718 ##22	PLPP2 (ENSCJPG00005009717)	ENSCJPG00005009716	ENSCJPG00005006208	NFIC (ENSCJPG00005006181) #15	ENSCJPG00005006177	ENSCJPG00005006176	FZR1 (ENSCJPG00005006175) #12	ENSCJPG00005006174	MFSD12 (ENSCJPG00005006173) #10	HMG20B (ENSCJPG00005006172) #9	GIPC3 (ENSCJPG00005006171) #8	TBXA2R (ENSCJPG00005006170) #7
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00530000063615.a	ENSGT00940000159004	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000155347.b	ENSGT00940000154929.B	ENSGT00950000182916.a.a #15	ENSGT00500000044957 #13	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00940000165115	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7
Chicken	MODERN SPECIES	20	ENSGALG00010028417	FSD1 (ENSGALG00010028415)	ENSGALG00010027189	MPND (ENSGALG00010027184)	ENSGALG00010027176	SAFB (ENSGALG00010027163)	C19orf70 (ENSGALG00010027151)	HSD11B1L (ENSGALG00010027139)	CELF5 (ENSGALG00010027133) #16	ENSGALG00010027132	NCLN (ENSGALG00010027129) #17	S1PR4 (ENSGALG00010027127) #18	ENSGALG00010027126	ENSGALG00010028733	GNA11 (ENSGALG00010027099) #20	ENSGALG00010027173 ##22	ENSGALG00010027170 ##22	ENSGALG00010027165 ##22	PLPP2 (ENSGALG00010027154)	ENSGALG00010027144	ENSGALG00010027120	ENSGALG00010028192	NFIC (ENSGALG00010028165) #15	DOHH (ENSGALG00010028156) #13	ENSGALG00010028154	FZR1 (ENSGALG00010028139) #12	TEKTIP1 (ENSGALG00010028135) #11	ENSGALG00010028133	MFSD12 (ENSGALG00010028127) #10	HMG20B (ENSGALG00010028125) #9	GIPC3 (ENSGALG00010028614) #8
Turkey	MODERN SPECIES	23	ENSMGAG00000002340	ENSMGAG00000002267	ENSMGAG00000022352	YJU2 (ENSMGAG00000009387)	SHD (ENSMGAG00000018362)	FSD1 (ENSMGAG00000008264)	ENSMGAG00000019987	ENSMGAG00000001149	ENSMGAG00000001156	CELF5 (ENSMGAG00000001169) #16	NCLN (ENSMGAG00000001222) #17	S1PR4 (ENSMGAG00000020349) #18	ENSMGAG00000017983	ENSMGAG00000020928	GNA11 (ENSMGAG00000011971) #20	ENSMGAG00000018357 ##22	ENSMGAG00000020401 ##22	ENSMGAG00000010080	ENSMGAG00000007708	ENSMGAG00000009189	ENSMGAG00000022151 ##15	DOHH (ENSMGAG00000001468) #13	ENSMGAG00000001467	FZR1 (ENSMGAG00000001395) #12	TEKTIP1 (ENSMGAG00000018114) #11	ENSMGAG00000001386	MFSD12 (ENSMGAG00000001371) #10	HMG20B (ENSMGAG00000001362) #9	GIPC3 (ENSMGAG00000018477) #8	TBXA2R (ENSMGAG00000015732) #7	ENSMGAG00000001353
Anatidae	ANCESTRAL SPECIES	59						ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Duck	MODERN SPECIES	20	HAPLN4 (ENSAPLG00000000916)	SUGP1 (ENSAPLG00000002500)	MAU2 (ENSAPLG00000002818)	ENSAPLG00000019522	ENSAPLG00000020158	ENSAPLG00000006355	ENSAPLG00000005780	MICOS13 (ENSAPLG00000001598)	HSD11B1L (ENSAPLG00000005717)	CELF5 (ENSAPLG00000005174) #16	NCLN (ENSAPLG00000004844) #17	S1PR4 (ENSAPLG00000001591) #18	ENSAPLG00000004622	ENSAPLG00000019679	GNA11 (ENSAPLG00000004066) #20	ENSAPLG00000029543 ##22	ENSAPLG00000028560 ##22	ENSAPLG00000023429 #22	PLPP2 (ENSAPLG00000002405)	ENSAPLG00000022748	ENSAPLG00000016255	ENSAPLG00000020284	TPGS1 (ENSAPLG00000030022)	BSG (ENSAPLG00000011010)	HCN2 (ENSAPLG00000018891)	POLRMT (ENSAPLG00000003051)	RNF126 (ENSAPLG00000002542)	ENSAPLG00000029258	ENSAPLG00000024489	FSTL3 (ENSAPLG00000029654)	ENSAPLG00000024410
Pink-footed goose	MODERN SPECIES	283				ENSABRG00000003519	ENSABRG00000003556	MICOS13 (ENSABRG00000003593)	HSD11B1L (ENSABRG00000003622)	CELF5 (ENSABRG00000003635) #16	ENSABRG00000003676	ENSABRG00000003686	NCLN (ENSABRG00000003699) #17	S1PR4 (ENSABRG00000003727) #18	ENSABRG00000003735	ENSABRG00000003763	GNA11 (ENSABRG00000003772) #20	ENSABRG00000003792 ##22	ENSABRG00000003810 ##22	ENSABRG00000003850 ##22	PLPP2 (ENSABRG00000004596)	MIER2 (ENSABRG00000004622)	C2CD4C (ENSABRG00000004634)	ENSABRG00000004653	ENSABRG00000004708	ENSABRG00000004736	TPGS1 (ENSABRG00000004739)	CDC34 (ENSABRG00000004747)	BSG (ENSABRG00000004756)	HCN2 (ENSABRG00000004767)	POLRMT (ENSABRG00000004780)	FGF22 (ENSABRG00000004853)	RNF126 (ENSABRG00000004878)
Neognathae_b	ANCESTRAL SPECIES	22					ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00940000159560	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Great tit	MODERN SPECIES	21	SIN3B (ENSPMJG00000010861)	TMEM38A (ENSPMJG00000010867)	SMIM7 (ENSPMJG00000010869)	MED26 (ENSPMJG00000010871)	SLC35E1 (ENSPMJG00000010872)	ENSPMJG00000010873	ENSPMJG00000010874	MICOS13 (ENSPMJG00000010875)	ENSPMJG00000010887	CELF5 (ENSPMJG00000010888) #16	NCLN (ENSPMJG00000010889) #17	S1PR4 (ENSPMJG00000010890) #18	ENSPMJG00000010891	ENSPMJG00000010892	GNA11 (ENSPMJG00000010893) #20	ENSPMJG00000010895 ##22	ENSPMJG00000010901 ##22	ENSPMJG00000010998 ##22	PLPP2 (ENSPMJG00000011001)	MIER2 (ENSPMJG00000011002)	C2CD4C (ENSPMJG00000011004)	ENSPMJG00000011005	ENSPMJG00000011011	ENSPMJG00000011016	CDC34 (ENSPMJG00000011017)	ENSPMJG00000011022	BSG (ENSPMJG00000011027)	HCN2 (ENSPMJG00000011030)	POLRMT (ENSPMJG00000011033)	FGF22 (ENSPMJG00000011038)	RNF126 (ENSPMJG00000011040)
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00940000159560	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00940000159560	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00940000159560	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Zebra finch	MODERN SPECIES	21	SIN3B (ENSTGUG00000000474)	TMEM38A (ENSTGUG00000000480)	ENSTGUG00000000482	MED26 (ENSTGUG00000025288)	SLC35E1 (ENSTGUG00000021589)	ENSTGUG00000000489	ENSTGUG00000000502	MICOS13 (ENSTGUG00000000509)	HSD11B1L (ENSTGUG00000000510)	ENSTGUG00000000514	NCLN (ENSTGUG00000000519) #17	S1PR4 (ENSTGUG00000029330) #18	ENSTGUG00000000525	ENSTGUG00000018462	GNA11 (ENSTGUG00000000541) #20	ENSTGUG00000026438 ##22	ENSTGUG00000026945 ##22	ENSTGUG00000000551 ##22	ENSTGUG00000000573 ##22	MIER2 (ENSTGUG00000000596)	ENSTGUG00000000601	ENSTGUG00000000605	ENSTGUG00000019805	TPGS1 (ENSTGUG00000029200)	CDC34 (ENSTGUG00000000612)	BSG (ENSTGUG00000000614)	HCN2 (ENSTGUG00000000617)	POLRMT (ENSTGUG00000000621)	FGF22 (ENSTGUG00000000627)	RNF126 (ENSTGUG00000000628)	FSTL3 (ENSTGUG00000029467)
Common canary	MODERN SPECIES	44	SMIM7 (ENSSCAG00000003955)	MED26 (ENSSCAG00000003956)	SLC35E1 (ENSSCAG00000003963)	ENSSCAG00000003979	ENSSCAG00000003995	ENSSCAG00000004187	ENSSCAG00000005346	ENSSCAG00000005350	ENSSCAG00000005353 ##16	CELF5 (ENSSCAG00000005358) #16	NCLN (ENSSCAG00000005389) #17	S1PR4 (ENSSCAG00000005525) #18	ENSSCAG00000005529	ENSSCAG00000005531	GNA11 (ENSSCAG00000005541) #20	ENSSCAG00000005555 ##22	ENSSCAG00000005560 ##22	ENSSCAG00000005609 ##22	PLPP2 (ENSSCAG00000005614)	MIER2 (ENSSCAG00000005618)	ENSSCAG00000005633	ENSSCAG00000005662	ENSSCAG00000005672	CDC34 (ENSSCAG00000005678)	BSG (ENSSCAG00000005681)	HCN2 (ENSSCAG00000005715)	POLRMT (ENSSCAG00000005816)	FGF22 (ENSSCAG00000005822)	RNF126 (ENSSCAG00000005824)	FSTL3 (ENSSCAG00000005827)	PRSS57 (ENSSCAG00000005829)
Medium ground finch	MODERN SPECIES	194	SIN3B (ENSGFOG00000005962)	TMEM38A (ENSGFOG00000005982)	SMIM7 (ENSGFOG00000005990)	MED26 (ENSGFOG00000005994)	SLC35E1 (ENSGFOG00000006003)	ENSGFOG00000006021	ENSGFOG00000006037	MICOS13 (ENSGFOG00000006055)	HSD11B1L (ENSGFOG00000006061)	CELF5 (ENSGFOG00000006068) #16	ENSGFOG00000006073	NCLN (ENSGFOG00000006078) #17	S1PR4 (ENSGFOG00000006094) #18	ENSGFOG00000006115	GNA11 (ENSGFOG00000006146) #20	ENSGFOG00000006165 ##22	ENSGFOG00000006181 ##22	ENSGFOG00000006195 ##22	PLPP2 (ENSGFOG00000006208)	MIER2 (ENSGFOG00000006236)	ENSGFOG00000006248	ENSGFOG00000006266	ENSGFOG00000006287	CDC34 (ENSGFOG00000006299)	BSG (ENSGFOG00000006308)	HCN2 (ENSGFOG00000006322)	POLRMT (ENSGFOG00000006350)	FGF22 (ENSGFOG00000006374)	RNF126 (ENSGFOG00000006391)	FSTL3 (ENSGFOG00000006398)	PALM (ENSGFOG00000006406)
Flycatcher	MODERN SPECIES	20	SIN3B (ENSFALG00000013869)	TMEM38A (ENSFALG00000013872)	ENSFALG00000028164	MED26 (ENSFALG00000013876)	SLC35E1 (ENSFALG00000023928)	ENSFALG00000013881	ENSFALG00000013882	ENSFALG00000027254	ENSFALG00000013885	CELF5 (ENSFALG00000013886) #16	NCLN (ENSFALG00000013887) #17	S1PR4 (ENSFALG00000013889) #18	ENSFALG00000013890	ENSFALG00000013891	ENSFALG00000026809	ENSFALG00000025042 ##22	ENSFALG00000013893 ##22	ENSFALG00000013895 ##22	PLPP2 (ENSFALG00000013897)	MIER2 (ENSFALG00000023554)	C2CD4C (ENSFALG00000013899)	ENSFALG00000013900	ENSFALG00000013902	BSG (ENSFALG00000013908)	ENSFALG00000014324	CDC34 (ENSFALG00000028583)	ENSFALG00000024797	HCN2 (ENSFALG00000024443)	POLRMT (ENSFALG00000013910)	FGF22 (ENSFALG00000013912)	RNF126 (ENSFALG00000025922)
Neognathae_c	ANCESTRAL SPECIES	24					ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Kakapo	MODERN SPECIES	13	INSR (ENSSHBG00005000915)	FCHO1 (ENSSHBG00005000933)	MAP1S (ENSSHBG00005005798)	ENSSHBG00005005870	ENSSHBG00005005932	ENSSHBG00005006054	MICOS13 (ENSSHBG00005006161)	HSD11B1L (ENSSHBG00005006185)	CELF5 (ENSSHBG00005006219) #16	ENSSHBG00005006249	NCLN (ENSSHBG00005006281) #17	S1PR4 (ENSSHBG00005006301) #18	ENSSHBG00005006473	ENSSHBG00005006703	GNA11 (ENSSHBG00005006722) #20	ENSSHBG00005006798 ##22	ENSSHBG00005006820 ##22	PLPP2 (ENSSHBG00005006885)	MIER2 (ENSSHBG00005006931)	C2CD4C (ENSSHBG00005006957)	ENSSHBG00005007004	ENSSHBG00005007174	ENSSHBG00005007199	TPGS1 (ENSSHBG00005007224)	CDC34 (ENSSHBG00005007233)	BSG (ENSSHBG00005007256)	HCN2 (ENSSHBG00005007287)	POLRMT (ENSSHBG00005007332)	FGF22 (ENSSHBG00005007358)	RNF126 (ENSSHBG00005007380)	FSTL3 (ENSSHBG00005007393)
Golden eagle	MODERN SPECIES	3					ENSACCG00020002292	ENSACCG00020002339	MICOS13 (ENSACCG00020002390)	HSD11B1L (ENSACCG00020002406)	CELF5 (ENSACCG00020002430) #16	ENSACCG00020002447	NCLN (ENSACCG00020002467) #17	S1PR4 (ENSACCG00020002496) #18	ENSACCG00020002505	ENSACCG00020002524	GNA11 (ENSACCG00020002535) #20	ENSACCG00020002548 ##22	ENSACCG00020002574 ##22	ENSACCG00020002654 ##22	PLPP2 (ENSACCG00020002678)	MIER2 (ENSACCG00020002716)	C2CD4C (ENSACCG00020002736)	ENSACCG00020002839	ENSACCG00020002940	ENSACCG00020002971	TPGS1 (ENSACCG00020002991)	CDC34 (ENSACCG00020003003)	BSG (ENSACCG00020003075)	HCN2 (ENSACCG00020003134)	POLRMT (ENSACCG00020003196)	FGF22 (ENSACCG00020003248)	RNF126 (ENSACCG00020003271)
African ostrich	MODERN SPECIES	995					ENSSCUG00000012619	ENSSCUG00000012591	MICOS13 (ENSSCUG00000012589)	ENSSCUG00000012587	CELF5 (ENSSCUG00000012584) #16	NCLN (ENSSCUG00000012578) #17	S1PR4 (ENSSCUG00000012573) #18	ENSSCUG00000012569	ENSSCUG00000012565	GNA15 (ENSSCUG00000018654) #19	GNA11 (ENSSCUG00000018653) #20	ENSSCUG00000018652 ##22	ENSSCUG00000018649 ##22	ENSSCUG00000018645 #22	MIER2 (ENSSCUG00000018643)
Australian saltwater crocodile	MODERN SPECIES	62	ENSCPRG00005011551	ENSCPRG00005011555	ENSCPRG00005011557	ENSCPRG00005011568	ENSCPRG00005011618	MICOS13 (ENSCPRG00005011634)	HSD11B1L (ENSCPRG00005011641)	ENSCPRG00005011646	CELF5 (ENSCPRG00005011647) #16	ENSCPRG00005011654	NCLN (ENSCPRG00005011700) #17	S1PR4 (ENSCPRG00005011922) #18	ENSCPRG00005011928	GNA15 (ENSCPRG00005011933) #19	GNA11 (ENSCPRG00005011942) #20	ENSCPRG00005011947 ##22	ENSCPRG00005011960 ##22	ENSCPRG00005012053 ##22	ENSCPRG00005012070	PLPP2 (ENSCPRG00005012077)	ENSCPRG00005012081	ENSCPRG00005012118	NFIC (ENSCPRG00005012131) #15	DOHH (ENSCPRG00005012140) #13	ENSCPRG00005012146	FZR1 (ENSCPRG00005012153) #12	TEKTIP1 (ENSCPRG00005012161) #11	ENSCPRG00005012164	MFSD12 (ENSCPRG00005012178) #10	HMG20B (ENSCPRG00005012188) #9	ENSCPRG00005012192 #8
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Goode s thornscrub tortoise	MODERN SPECIES	14	ENSGEVG00005005487	ENSGEVG00005005399	MICOS13 (ENSGEVG00005005371)	HSD11B1L (ENSGEVG00005005332)	ENSGEVG00005005303	ENSGEVG00005005291	CELF5 (ENSGEVG00005005212) #16	ENSGEVG00005005181	NCLN (ENSGEVG00005005117) #17	S1PR4 (ENSGEVG00005005079) #18	ENSGEVG00005005031	ENSGEVG00005004996	ENSGEVG00005004980	GNA15 (ENSGEVG00005004969) #19	GNA11 (ENSGEVG00005004947) #20	ENSGEVG00005004928 ##22	ENSGEVG00005004854 ##22	ENSGEVG00005004785 ##22	PLPP2 (ENSGEVG00005004755)	MIER2 (ENSGEVG00005004722)	ENSGEVG00005004678	C2CD4C (ENSGEVG00005004654)	ENSGEVG00005004612	ODF3L2 (ENSGEVG00005004556)	ENSGEVG00005004508	ENSGEVG00005004447	TPGS1 (ENSGEVG00005004421)	CDC34 (ENSGEVG00005004403)	ENSGEVG00005004369	BSG (ENSGEVG00005004347)	HCN2 (ENSGEVG00005004303)
Abingdon island giant tortoise	MODERN SPECIES		ENSCABG00000002524	ENSCABG00000002535	ENSCABG00000003198	MICOS13 (ENSCABG00000003199)	HSD11B1L (ENSCABG00000003200)	ENSCABG00000003201	ENSCABG00000003202	ENSCABG00000003203 #16	NCLN (ENSCABG00000003204) #17	S1PR4 (ENSCABG00000003205) #18	ENSCABG00000003206	ENSCABG00000003207	ENSCABG00000003208	GNA15 (ENSCABG00000003209) #19	GNA11 (ENSCABG00000003212) #20	ENSCABG00000003216 ##22	ENSCABG00000003252 ##22	ENSCABG00000003262 ##22	ENSCABG00000003264 ##22	PLPP2 (ENSCABG00000003266)	MIER2 (ENSCABG00000003269)	ENSCABG00000003271	C2CD4C (ENSCABG00000003274)	ENSCABG00000003276	ODF3L2 (ENSCABG00000003286)	ENSCABG00000003288	ENSCABG00000003293	TPGS1 (ENSCABG00000003296)	CDC34 (ENSCABG00000003300)	BSG (ENSCABG00000003303)	HCN2 (ENSCABG00000003308)
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000155916.g	ENSGT00940000155916.h.a	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01030000234551.j.b.a.b	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00960000189417	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Three-toed box turtle	MODERN SPECIES	92	ENSTMTG00000003382	ENSTMTG00000003370	ENSTMTG00000003291	ENSTMTG00000003244	ENSTMTG00000003086	HSD11B1L (ENSTMTG00000003049)	ENSTMTG00000003043	ENSTMTG00000003035	CELF5 (ENSTMTG00000009243) #16	NCLN (ENSTMTG00000009205) #17	ENSTMTG00000009163	ENSTMTG00000009150	ENSTMTG00000009138	GNA15 (ENSTMTG00000009022) #19	GNA11 (ENSTMTG00000008985) #20	ENSTMTG00000008968 ##22	ENSTMTG00000008948 ##22	ENSTMTG00000008928 ##22	ENSTMTG00000008912	MIER2 (ENSTMTG00000008896)	ENSTMTG00000008874	ENSTMTG00000008855	ENSTMTG00000008829	ODF3L2 (ENSTMTG00000008794)	ENSTMTG00000008771	ENSTMTG00000008752	TPGS1 (ENSTMTG00000008742)	CDC34 (ENSTMTG00000008730)	ENSTMTG00000008706	ENSTMTG00000008687	HCN2 (ENSTMTG00000008633)
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	712	ENSCPBG00000010670	TBX1 (ENSCPBG00000010673)	GNB1L (ENSCPBG00000010679)	TXNRD2 (ENSCPBG00000010687)	COMT (ENSCPBG00000010707)	ARVCF (ENSCPBG00000010719)	ENSCPBG00000010734	ODF3L2 (ENSCPBG00000010739)	ENSCPBG00000010743	C2CD4C (ENSCPBG00000010755)	ENSCPBG00000010762	MIER2 (ENSCPBG00000010767)	ENSCPBG00000010780	PLPP2 (ENSCPBG00000010793)	ENSCPBG00000010802 ##22	ENSCPBG00000010809 ##22	ENSCPBG00000010822 ##22	ENSCPBG00000010838 ##22	GNA11 (ENSCPBG00000010843) #20	GNA15 (ENSCPBG00000010851) #19	ENSCPBG00000010868	ENSCPBG00000010874	ENSCPBG00000010880	NCLN (ENSCPBG00000010884) #17	ENSCPBG00000010898	CELF5 (ENSCPBG00000010903) #16	ENSCPBG00000010910	ENSCPBG00000010912	ENSCPBG00000010915	MICOS13 (ENSCPBG00000010918)	ENSCPBG00000010921
painted turtle	MODERN SPECIES	712	ENSCPBG00000010936	ENSCPBG00000010928	ENSCPBG00000010921	MICOS13 (ENSCPBG00000010918)	ENSCPBG00000010915	ENSCPBG00000010912	ENSCPBG00000010910	CELF5 (ENSCPBG00000010903) #16	ENSCPBG00000010898	NCLN (ENSCPBG00000010884) #17	ENSCPBG00000010880	ENSCPBG00000010874	ENSCPBG00000010868	GNA15 (ENSCPBG00000010851) #19	GNA11 (ENSCPBG00000010843) #20	ENSCPBG00000010838 ##22	ENSCPBG00000010822 ##22	ENSCPBG00000010809 ##22	ENSCPBG00000010802 ##22	PLPP2 (ENSCPBG00000010793)	ENSCPBG00000010780	MIER2 (ENSCPBG00000010767)	ENSCPBG00000010762	C2CD4C (ENSCPBG00000010755)	ENSCPBG00000010743	ODF3L2 (ENSCPBG00000010739)	ENSCPBG00000010734	ARVCF (ENSCPBG00000010719)	COMT (ENSCPBG00000010707)	TXNRD2 (ENSCPBG00000010687)	GNB1L (ENSCPBG00000010679)
Mammalia	ANCESTRAL SPECIES	39	ENSGT00940000160748	ENSGT00940000165052	ENSGT00940000162475	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00940000161827	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000161188.c.b	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000162161.A	ENSGT00940000159142	ENSGT00940000156523.b
Platypus	MODERN SPECIES	84	KCNN1 (ENSOANG00000015602)	ENSOANG00000046007	SLC5A5 (ENSOANG00000042719)	JAK3 (ENSOANG00000005345)	RFLCII (ENSOANG00000050111)	ENSOANG00000002522	FCHO1 (ENSOANG00000050662)	ENSOANG00000038182	ENSOANG00000006364	ENSOANG00000037797	CELF5 (ENSOANG00000043136) #16	NCLN (ENSOANG00000003212) #17	S1PR4 (ENSOANG00000007015) #18	GNA15 (ENSOANG00000001318) #19	ENSOANG00000039193 #20	ENSOANG00000043023 ##22	ENSOANG00000008780 ##22	ENSOANG00000039271 ##22	PLPP2 (ENSOANG00000048271)	ENSOANG00000044008	ENSOANG00000047030	C2CD4C (ENSOANG00000050707)	ENSOANG00000037421	ENSOANG00000006982	ENSOANG00000042371	ENSOANG00000049713	TPGS1 (ENSOANG00000043667)	CDC34 (ENSOANG00000010137)	ENSOANG00000021318	BSG (ENSOANG00000048631)	ENSOANG00000041427
Theria	ANCESTRAL SPECIES	31	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00390000015797.c.a	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000162161.A	ENSGT00940000159142	ENSGT00940000156523.b
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00940000159994	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00390000015797.c.a	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000162161.A	ENSGT00940000159142
Opossum	MODERN SPECIES	2	ENSMODG00000014682	KCNN1 (ENSMODG00000019170)	CCDC124 (ENSMODG00000042946)	ENSMODG00000029513	RPL18A (ENSMODG00000037004)	JAK3 (ENSMODG00000019165)	ENSMODG00000037566	B3GNT3 (ENSMODG00000019158)	FCHO1 (ENSMODG00000028655)	MAP1S (ENSMODG00000019153)	ENSMODG00000019151	NCLN (ENSMODG00000019149) #17	S1PR4 (ENSMODG00000019145) #18	GNA15 (ENSMODG00000019144) #19	GNA11 (ENSMODG00000019142) #20	ENSMODG00000019140 ##22	SCARB1 (ENSMODG00000015688)	DHX37 (ENSMODG00000015681)	ENSMODG00000048892	AACS (ENSMODG00000015672)	ENSMODG00000015657	ENSMODG00000050318	ENSMODG00000015653	TMEM132C (ENSMODG00000015648)	SLC15A4 (ENSMODG00000015645)	ENSMODG00000037887	GLT1D1 (ENSMODG00000015634)	ENSMODG00000045547	FZD10 (ENSMODG00000015625)	PIWIL1 (ENSMODG00000015619)	ENSMODG00000045138
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00940000159994	ENSGT00950000182904.a.b.b	ENSGT00390000012482.b	ENSGT00940000159489	ENSGT00390000015797.c.a.i	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00390000008060
Diprotodontia	ANCESTRAL SPECIES	54	ENSGT00940000159994	ENSGT00950000182904.a.b.b	ENSGT00390000012482.b	ENSGT00940000159489	ENSGT00390000015797.c.a.i	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00390000008060	ENSGT00940000161721
Wallaby	MODERN SPECIES	1420																ENSMEUG00000001762 ##22
Diprotodontia_a	ANCESTRAL SPECIES	53	ENSGT00940000159994	ENSGT00950000182904.a.b.b	ENSGT00390000012482.b	ENSGT00940000159489	ENSGT00390000015797.c.a.i	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00390000008060	ENSGT00940000161721
Common wonbat	MODERN SPECIES	626	ARRDC2 (ENSVURG00010014827)	KCNN1 (ENSVURG00010014819)	CCDC124 (ENSVURG00010014813)	SLC5A5 (ENSVURG00010014802)	ENSVURG00010014755	JAK3 (ENSVURG00010014721)	ENSVURG00010014710	B3GNT3 (ENSVURG00010014702)	FCHO1 (ENSVURG00010014674)	MAP1S (ENSVURG00010014460)	CELF5 (ENSVURG00010014264) #16	NCLN (ENSVURG00010014249) #17	S1PR4 (ENSVURG00010014236) #18	GNA15 (ENSVURG00010014228) #19	GNA11 (ENSVURG00010014220) #20	ENSVURG00010014214 ##22	ENSVURG00010014208 ##22
koala	MODERN SPECIES	133	KCNN1 (ENSPCIG00000027183)	ENSPCIG00000031020	SLC5A5 (ENSPCIG00000027171)	ENSPCIG00000027151	ENSPCIG00000027147	JAK3 (ENSPCIG00000027139)	ENSPCIG00000027134	B3GNT3 (ENSPCIG00000033076)	FCHO1 (ENSPCIG00000027129)	MAP1S (ENSPCIG00000027127)	CELF5 (ENSPCIG00000027126) #16	NCLN (ENSPCIG00000027124) #17	S1PR4 (ENSPCIG00000027123) #18	GNA15 (ENSPCIG00000027122) #19	GNA11 (ENSPCIG00000034212) #20	ENSPCIG00000022239 ##22	ENSPCIG00000035480 ##22	ENSPCIG00000033729	ENSPCIG00000022225 ##22	PLPP2 (ENSPCIG00000022219)	MIER2 (ENSPCIG00000022207)	ENSPCIG00000009623	C2CD4C (ENSPCIG00000036252)	ENSPCIG00000009621	ODF3L2 (ENSPCIG00000031263)	ENSPCIG00000006069	ENSPCIG00000006071	TPGS1 (ENSPCIG00000006072)	CDC34 (ENSPCIG00000006074)	BSG (ENSPCIG00000006097)	ENSPCIG00000006101
Tasmanian devil	MODERN SPECIES		ARRDC2 (ENSSHAG00000007311)	KCNN1 (ENSSHAG00000006692)	CCDC124 (ENSSHAG00000021571)	SLC5A5 (ENSSHAG00000000675)	ENSSHAG00000022561	JAK3 (ENSSHAG00000004978)	ENSSHAG00000022068	B3GNT3 (ENSSHAG00000003539)	ENSSHAG00000002099	ENSSHAG00000008823 #16	NCLN (ENSSHAG00000007494) #17	S1PR4 (ENSSHAG00000007216) #18	ENSSHAG00000027184 #19	ENSSHAG00000021365 #19	ENSSHAG00000006119 #20	ENSSHAG00000004602 ##22	ENSSHAG00000025822 ##22	ENSSHAG00000022567 ##22	ENSSHAG00000003187 ##22	ENSSHAG00000022969 ##22	ENSSHAG00000000085	MIER2 (ENSSHAG00000001062)	ENSSHAG00000027359	ENSSHAG00000011908	C2CD4C (ENSSHAG00000026956)	ENSSHAG00000023520	ODF3L2 (ENSSHAG00000011299)	ENSSHAG00000011038	TPGS1 (ENSSHAG00000024988)	CDC34 (ENSSHAG00000026543)	ENSSHAG00000020581
Eutheria	ANCESTRAL SPECIES	24	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT01000000216439	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT00970000193437
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.e.b	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT00970000193437
Euarchontoglires_A	ANCESTRAL SPECIES	7	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00940000157335
Glires	ANCESTRAL SPECIES	6	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT01100000264521	ENSGT00940000154417.a.a	ENSGT00940000164150
Rodentia	ANCESTRAL SPECIES	8	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT01100000264521	ENSGT00940000154417.a.a	ENSGT00940000164150
Rodentia_B	ANCESTRAL SPECIES	21	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Myomorpha	ANCESTRAL SPECIES	22	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Muroidea	ANCESTRAL SPECIES	19	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Muroidea_A	ANCESTRAL SPECIES	16	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Cricetidae	ANCESTRAL SPECIES	7	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000157335	ENSGT00940000153348.A
Cricetinae	ANCESTRAL SPECIES	16	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Chinese hamster chok1gshd	MODERN SPECIES	112	Pmfbp1 (ENSCGRG00001000160)	Dhx38 (ENSCGRG00001021542)	Txnl4b (ENSCGRG00001018693)	Hp (ENSCGRG00001022307)	Dhodh (ENSCGRG00001014633)	Pkd1l3 (ENSCGRG00001023884)	Ist1 (ENSCGRG00001012174)	Zfp821 (ENSCGRG00001023974)	Atxn1l (ENSCGRG00001005951)	Ap1g1 (ENSCGRG00001022757)	Phlpp2 (ENSCGRG00001014088)	Marveld3 (ENSCGRG00001018229)	Tat (ENSCGRG00001010175)	Chst4 (ENSCGRG00001013422)	Zfp612 (ENSCGRG00001000845)	Tle7 (ENSCGRG00001018163) ##22	Calb2 (ENSCGRG00001021465)	Cmtr2 (ENSCGRG00001008188)	Hydin (ENSCGRG00001020638)	Vac14 (ENSCGRG00001003764)	Mtss2 (ENSCGRG00001008250)	Il34 (ENSCGRG00001005627)	ENSCGRG00001000994	Sf3b3 (ENSCGRG00001015908)	Cog4 (ENSCGRG00001007403)	Fcsk (ENSCGRG00001025027)	St3gal2 (ENSCGRG00001019838)	Ddx19b (ENSCGRG00001015299)	AARS (ENSCGRG00001014390)	Exosc6 (ENSCGRG00001000899)	Clec18a (ENSCGRG00001018618)
Cricetidae_B	ANCESTRAL SPECIES	5	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Prairie vole	MODERN SPECIES	12	Dhx38 (ENSMOCG00000016798)	Txnl4b (ENSMOCG00000013902)	Hp (ENSMOCG00000022096)	ENSMOCG00000011833	ENSMOCG00000017444	Pkd1l3 (ENSMOCG00000021954)	Ist1 (ENSMOCG00000001146)	Zfp821 (ENSMOCG00000021660)	Atxn1l (ENSMOCG00000021726)	Ap1g1 (ENSMOCG00000011726)	Phlpp2 (ENSMOCG00000018836)	Marveld3 (ENSMOCG00000013975)	Tat (ENSMOCG00000009410)	Zfp612 (ENSMOCG00000000684)	ENSMOCG00000000735	Tle7 (ENSMOCG00000021470) ##22	Calb2 (ENSMOCG00000015513)	Cmtr2 (ENSMOCG00000000828)	Hydin (ENSMOCG00000012796)	Vac14 (ENSMOCG00000022173)	Mtss2 (ENSMOCG00000016655)	Il34 (ENSMOCG00000007333)	Sf3b3 (ENSMOCG00000006108)	Cog4 (ENSMOCG00000020120)	Fcsk (ENSMOCG00000003610)	St3gal2 (ENSMOCG00000018546)	Ddx19a (ENSMOCG00000017220)	Ddx19b (ENSMOCG00000007627)	Aars (ENSMOCG00000005336)	Exosc6 (ENSMOCG00000003020)	Clec18a (ENSMOCG00000018614)
Northern American deer mouse	MODERN SPECIES	18	Txnl4b (ENSPEMG00000028622)	Hp (ENSPEMG00000018012)	Dhodh (ENSPEMG00000009624)	Pkd1l3 (ENSPEMG00000009921)	Ist1 (ENSPEMG00000005645)	Zfp821 (ENSPEMG00000018274)	Atxn1l (ENSPEMG00000031127)	Ap1g1 (ENSPEMG00000011828)	Phlpp2 (ENSPEMG00000010279)	Marveld3 (ENSPEMG00000028662)	Tat (ENSPEMG00000002277)	Chst4 (ENSPEMG00000001048)	ENSPEMG00000027545	Zfp612 (ENSPEMG00000013228)	ENSPEMG00000009468	Tle7 (ENSPEMG00000009194) ##22	Calb2 (ENSPEMG00000017745)	Cmtr2 (ENSPEMG00000015578)	ENSPEMG00000026038	Hydin (ENSPEMG00000017860)	Vac14 (ENSPEMG00000007163)	Mtss2 (ENSPEMG00000017103)	Il34 (ENSPEMG00000015570)	Sf3b3 (ENSPEMG00000008603)	Cog4 (ENSPEMG00000018002)	Fcsk (ENSPEMG00000010443)	St3gal2 (ENSPEMG00000025846)	Ddx19a (ENSPEMG00000004043)	ENSPEMG00000030117	Ddx19b (ENSPEMG00000008683)	ENSPEMG00000028725
Murinae	ANCESTRAL SPECIES	15	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Mus	ANCESTRAL SPECIES	6	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Mus_A	ANCESTRAL SPECIES	8	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Mus_B	ANCESTRAL SPECIES	6	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Mouse	MODERN SPECIES	17	Pmfbp1 (ENSMUSG00000031727)	Dhx38 (ENSMUSG00000037993)	Txnl4b (ENSMUSG00000031723)	Hp (ENSMUSG00000031722)	Dhodh (ENSMUSG00000031730)	Pkd1l3 (ENSMUSG00000048827)	Ist1 (ENSMUSG00000031729)	Zfp821 (ENSMUSG00000031728)	Atxn1l (ENSMUSG00000069895)	Ap1g1 (ENSMUSG00000031731)	Phlpp2 (ENSMUSG00000031732)	Marveld3 (ENSMUSG00000001672)	Tat (ENSMUSG00000001670)	Chst4 (ENSMUSG00000035930)	Zfp612 (ENSMUSG00000044676)	Tle7 (ENSMUSG00000095941) ##22	Calb2 (ENSMUSG00000003657)	Cmtr2 (ENSMUSG00000046441)	Hydin (ENSMUSG00000059854)	Vac14 (ENSMUSG00000010936)	Mtss2 (ENSMUSG00000033763)	Il34 (ENSMUSG00000031750)	Sf3b3 (ENSMUSG00000033732)	Cog4 (ENSMUSG00000031753)	Fcsk (ENSMUSG00000033703)	St3gal2 (ENSMUSG00000031749)	Ddx19a (ENSMUSG00000015023)	Ddx19b (ENSMUSG00000033658)	Aars (ENSMUSG00000031960)	Exosc6 (ENSMUSG00000109941)	Clec18a (ENSMUSG00000033633)
Mus_C	ANCESTRAL SPECIES	5	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Steppe mouse	MODERN SPECIES	3379	Pkd1l3 (ENSMSIG00000017689)	Ist1 (ENSMSIG00000018010)	Zfp821 (ENSMSIG00000018032)	Atxn1l (ENSMSIG00000018056)	ENSMSIG00000018067	Ap1g1 (ENSMSIG00000018117)	ENSMSIG00000018209	ENSMSIG00000018225	Phlpp2 (ENSMSIG00000018231)	Marveld3 (ENSMSIG00000018257)	Tat (ENSMSIG00000018276)	ENSMSIG00000018296	Chst4 (ENSMSIG00000018311)	Zfp612 (ENSMSIG00000018325)	ENSMSIG00000018357	Tle7 (ENSMSIG00000018373) ##22	ENSMSIG00000018482	Cmtr2 (ENSMSIG00000018491)	Hydin (ENSMSIG00000018510)	Vac14 (ENSMSIG00000018802)	Mtss2 (ENSMSIG00000018835)	Il34 (ENSMSIG00000018943)	Sf3b3 (ENSMSIG00000018994)	Cog4 (ENSMSIG00000019065)	Fcsk (ENSMSIG00000019146)	St3gal2 (ENSMSIG00000019213)	Ddx19a (ENSMSIG00000019234)	ENSMSIG00000019272	Ddx19b (ENSMSIG00000019285)	ENSMSIG00000019377	Aars (ENSMSIG00000019384)
spretus	MODERN SPECIES	17	Dhx38 (MGP_SPRETEiJ_G0032659)	Txnl4b (MGP_SPRETEiJ_G0032660)	Hp (MGP_SPRETEiJ_G0032661)	Dhodh (MGP_SPRETEiJ_G0032662)	Pkd1l3 (MGP_SPRETEiJ_G0032663)	Ist1 (MGP_SPRETEiJ_G0032664)	Zfp821 (MGP_SPRETEiJ_G0032665)	Atxn1l (MGP_SPRETEiJ_G0032666)	Ap1g1 (MGP_SPRETEiJ_G0032667)	Phlpp2 (MGP_SPRETEiJ_G0032668)	Marveld3 (MGP_SPRETEiJ_G0032669)	Tat (MGP_SPRETEiJ_G0032670)	Chst4 (MGP_SPRETEiJ_G0032671)	Zfp612 (MGP_SPRETEiJ_G0032672)	MGP_SPRETEiJ_G0032673	MGP_SPRETEiJ_G0032674 ##22	Calb2 (MGP_SPRETEiJ_G0032675)	Cmtr2 (MGP_SPRETEiJ_G0032676)	MGP_SPRETEiJ_G0032677	Vac14 (MGP_SPRETEiJ_G0032678)	Mtss2 (MGP_SPRETEiJ_G0032679)	MGP_SPRETEiJ_G0032680	Sf3b3 (MGP_SPRETEiJ_G0032681)	Cog4 (MGP_SPRETEiJ_G0032682)	Fcsk (MGP_SPRETEiJ_G0032683)	St3gal2 (MGP_SPRETEiJ_G0032684)	MGP_SPRETEiJ_G0032685	MGP_SPRETEiJ_G0032686	MGP_SPRETEiJ_G0032687	MGP_SPRETEiJ_G0032688	Pdpr (MGP_SPRETEiJ_G0032689)
Ryukyu mouse	MODERN SPECIES	17	Dhx38 (MGP_CAROLIEiJ_G0031541)	Txnl4b (MGP_CAROLIEiJ_G0031542)	Hp (MGP_CAROLIEiJ_G0031543)	Dhodh (MGP_CAROLIEiJ_G0031544)	MGP_CAROLIEiJ_G0031545	Ist1 (MGP_CAROLIEiJ_G0031546)	Zfp821 (MGP_CAROLIEiJ_G0031547)	Atxn1l (MGP_CAROLIEiJ_G0031548)	Ap1g1 (MGP_CAROLIEiJ_G0031549)	Phlpp2 (MGP_CAROLIEiJ_G0031550)	Marveld3 (MGP_CAROLIEiJ_G0031551)	Tat (MGP_CAROLIEiJ_G0031552)	Chst4 (MGP_CAROLIEiJ_G0031553)	Zfp612 (MGP_CAROLIEiJ_G0031554)	MGP_CAROLIEiJ_G0031555	MGP_CAROLIEiJ_G0031556 ##22	Calb2 (MGP_CAROLIEiJ_G0031557)	Cmtr2 (MGP_CAROLIEiJ_G0031558)	Hydin (MGP_CAROLIEiJ_G0031559)	Vac14 (MGP_CAROLIEiJ_G0031560)	Mtss2 (MGP_CAROLIEiJ_G0031561)	Il34 (MGP_CAROLIEiJ_G0031562)	Sf3b3 (MGP_CAROLIEiJ_G0031563)	Cog4 (MGP_CAROLIEiJ_G0031564)	Fcsk (MGP_CAROLIEiJ_G0031565)	St3gal2 (MGP_CAROLIEiJ_G0031566)	Ddx19a (MGP_CAROLIEiJ_G0031567)	Ddx19b (MGP_CAROLIEiJ_G0031568)	MGP_CAROLIEiJ_G0031569	Clec18a (MGP_CAROLIEiJ_G0031570)	Pdpr (MGP_CAROLIEiJ_G0031571)
Shrew mouse	MODERN SPECIES	12	Pmfbp1 (MGP_PahariEiJ_G0023140)	Dhx38 (MGP_PahariEiJ_G0023141)	Txnl4b (MGP_PahariEiJ_G0023142)	Hp (MGP_PahariEiJ_G0023143)	Dhodh (MGP_PahariEiJ_G0023144)	MGP_PahariEiJ_G0023145	Ist1 (MGP_PahariEiJ_G0023146)	Zfp821 (MGP_PahariEiJ_G0023147)	Ap1g1 (MGP_PahariEiJ_G0023148)	Phlpp2 (MGP_PahariEiJ_G0023149)	Marveld3 (MGP_PahariEiJ_G0023150)	Tat (MGP_PahariEiJ_G0023151)	MGP_PahariEiJ_G0023152	Zfp612 (MGP_PahariEiJ_G0023153)	MGP_PahariEiJ_G0023154	MGP_PahariEiJ_G0023155 ##22	Calb2 (MGP_PahariEiJ_G0023156)	Cmtr2 (MGP_PahariEiJ_G0023157)	Hydin (MGP_PahariEiJ_G0023158)	Vac14 (MGP_PahariEiJ_G0023159)	Mtss2 (MGP_PahariEiJ_G0023160)	Il34 (MGP_PahariEiJ_G0023161)	Sf3b3 (MGP_PahariEiJ_G0023162)	Cog4 (MGP_PahariEiJ_G0023163)	Fcsk (MGP_PahariEiJ_G0023164)	St3gal2 (MGP_PahariEiJ_G0023165)	MGP_PahariEiJ_G0023166	MGP_PahariEiJ_G0023167	MGP_PahariEiJ_G0023168	MGP_PahariEiJ_G0023169	Pdpr (MGP_PahariEiJ_G0023170)
Rat	MODERN SPECIES	10	Txnl4b (ENSRNOG00000021379)	ENSRNOG00000063716	Hp (ENSRNOG00000014964)	Dhodh (ENSRNOG00000015063)	Pkd1l3 (ENSRNOG00000052310)	Ist1 (ENSRNOG00000015144)	Zfp821 (ENSRNOG00000000262)	Atxn1l (ENSRNOG00000038766)	Ap1g1 (ENSRNOG00000069458)	Phlpp2 (ENSRNOG00000016108)	Marveld3 (ENSRNOG00000016291)	Tat (ENSRNOG00000016348)	Chst4 (ENSRNOG00000016953)	Zfp612 (ENSRNOG00000016971)	Gm17720 (ENSRNOG00000062604)	Tle7 (ENSRNOG00000038741) ##22	Calb2 (ENSRNOG00000016977)	Cmtr2 (ENSRNOG00000017102)	Hydin (ENSRNOG00000017178)	Vac14 (ENSRNOG00000017219)	Mtss2 (ENSRNOG00000017500)	Il34 (ENSRNOG00000017602)	AABR07058423.3 (ENSRNOG00000051265)	Sf3b3 (ENSRNOG00000017724)	Cog4 (ENSRNOG00000017745)	Fcsk (ENSRNOG00000059453)	St3gal2 (ENSRNOG00000017932)	Ddx19a (ENSRNOG00000018033)	Ddx19b (ENSRNOG00000064019)	Aars1 (ENSRNOG00000018404)	Exosc6 (ENSRNOG00000018582)
Upper Galilee mountains blind mole rat	MODERN SPECIES	902	Dhx38 (ENSNGAG00000014084)	Txnl4b (ENSNGAG00000001271)	Hp (ENSNGAG00000005103)	Dhodh (ENSNGAG00000014011)	Pkd1l3 (ENSNGAG00000017719)	Ist1 (ENSNGAG00000006561)	ENSNGAG00000011305	Zfp821 (ENSNGAG00000012519)	Atxn1l (ENSNGAG00000011960)	ENSNGAG00000019717	Ap1g1 (ENSNGAG00000001124)	Phlpp2 (ENSNGAG00000020098)	Marveld3 (ENSNGAG00000021023)	Tat (ENSNGAG00000006911)	Zfp612 (ENSNGAG00000004069)	Tle7 (ENSNGAG00000011923) ##22	Calb2 (ENSNGAG00000016791)	Cmtr2 (ENSNGAG00000015133)	Hydin (ENSNGAG00000001005)	Vac14 (ENSNGAG00000019949)	Mtss2 (ENSNGAG00000001336)	Il34 (ENSNGAG00000015616)	Sf3b3 (ENSNGAG00000021903)	Cog4 (ENSNGAG00000022904)	Fcsk (ENSNGAG00000020055)
Lesser Egyptian jerboa	MODERN SPECIES	71	Txnl4b (ENSJJAG00000014020)	Hp (ENSJJAG00000000389)	Dhodh (ENSJJAG00000004380)	Pkd1l3 (ENSJJAG00000019074)	Ist1 (ENSJJAG00000009199)	Zfp821 (ENSJJAG00000017771)	ENSJJAG00000004633	ENSJJAG00000006838	Ap1g1 (ENSJJAG00000022831)	Phlpp2 (ENSJJAG00000018183)	Marveld3 (ENSJJAG00000015672)	ENSJJAG00000016248	Tat (ENSJJAG00000015605)	Chst4 (ENSJJAG00000016154)	Zfp612 (ENSJJAG00000014956)	Tle7 (ENSJJAG00000020440) ##22	Calb2 (ENSJJAG00000019534)	ENSJJAG00000013980	ENSJJAG00000010966	Hydin (ENSJJAG00000024000)	ENSJJAG00000018488	Vac14 (ENSJJAG00000000270)	Mtss2 (ENSJJAG00000015697)	Il34 (ENSJJAG00000013016)	Sf3b3 (ENSJJAG00000003948)	Cog4 (ENSJJAG00000013653)	Fcsk (ENSJJAG00000022615)	St3gal2 (ENSJJAG00000006508)	ENSJJAG00000014394	Aars (ENSJJAG00000008731)	Exosc6 (ENSJJAG00000003460)
Kangaroo rat	MODERN SPECIES	337	Zfhx3 (ENSDORG00000016147)	Pmfbp1 (ENSDORG00000005232)	Dhx38 (ENSDORG00000005226)	Txnl4b (ENSDORG00000005223)	Hp (ENSDORG00000005220)	Dhodh (ENSDORG00000013800)	Ist1 (ENSDORG00000002409)	Zfp821 (ENSDORG00000002406)	Atxn1l (ENSDORG00000028057)	ENSDORG00000030095	Phlpp2 (ENSDORG00000005834)	Marveld3 (ENSDORG00000005833)	Tat (ENSDORG00000002831)	Chst4 (ENSDORG00000002830)	Zfp612 (ENSDORG00000011582)	Tle7 (ENSDORG00000023639) ##22	Calb2 (ENSDORG00000016045)	Cmtr2 (ENSDORG00000025105)	ENSDORG00000023244	Vac14 (ENSDORG00000011122)	Mtss2 (ENSDORG00000011119)	Il34 (ENSDORG00000009844)	Sf3b3 (ENSDORG00000014176)	Cog4 (ENSDORG00000014062)	Fcsk (ENSDORG00000014055)	St3gal2 (ENSDORG00000025194)	Ddx19a (ENSDORG00000002078)	Ddx19b (ENSDORG00000004421)	Aars (ENSDORG00000004110)	Clec18a (ENSDORG00000004108)	Pdpr (ENSDORG00000004105)
Rodentia_A	ANCESTRAL SPECIES	6	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01100000264521	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000157335
Hystricomorpha	ANCESTRAL SPECIES	22	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000157335	ENSGT00940000153348.A
Naked mole-rat female	MODERN SPECIES	26	Hp (ENSHGLG00000017320)	ENSHGLG00000034144	ENSHGLG00000012868	ENSHGLG00000010625	ZNF821 (ENSHGLG00000010079)	ATXN1L (ENSHGLG00000047276)	ENSHGLG00000011372	ENSHGLG00000014932	PHLPP2 (ENSHGLG00000012919)	ENSHGLG00000013360	TAT (ENSHGLG00000012596)	CHST4 (ENSHGLG00000020785)	ENSHGLG00000043779	ENSHGLG00000011510	ENSHGLG00000046687	TLE7 (ENSHGLG00000011868) ##22	ENSHGLG00000038201	CALB2 (ENSHGLG00000017124)	CMTR2 (ENSHGLG00000013565)	ENSHGLG00000042715	ENSHGLG00000014406	HYDIN (ENSHGLG00000032026)	VAC14 (ENSHGLG00000009916)	MTSS1L (ENSHGLG00000046719)	IL34 (ENSHGLG00000012281)	SF3B3 (ENSHGLG00000010135)	COG4 (ENSHGLG00000019190)	FCSK (ENSHGLG00000012100)	ST3GAL2 (ENSHGLG00000044574)	DDX19A (ENSHGLG00000011681)	ENSHGLG00000036535
Hystricomorpha_a	ANCESTRAL SPECIES	22	ENSGT00940000156149.B	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00900000141128
Hystricomorpha_b	ANCESTRAL SPECIES	15	ENSGT00940000156149.B	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00900000141128
Long-tailed chinchilla	MODERN SPECIES	191	PMFBP1 (ENSCLAG00000009396)	DHX38 (ENSCLAG00000008250)	TXNL4B (ENSCLAG00000008041)	ENSCLAG00000007495	DHODH (ENSCLAG00000003204)	IST1 (ENSCLAG00000006152)	ZNF821 (ENSCLAG00000005384)	ATXN1L (ENSCLAG00000005129)	AP1G1 (ENSCLAG00000003945)	PHLPP2 (ENSCLAG00000003562)	ENSCLAG00000003348	TAT (ENSCLAG00000003256)	CHST4 (ENSCLAG00000017669)	ZNF23 (ENSCLAG00000006028)	ENSCLAG00000005991	TLE7 (ENSCLAG00000005771) ##22	CALB2 (ENSCLAG00000004773)	CMTR2 (ENSCLAG00000008920)	HYDIN (ENSCLAG00000012219)	VAC14 (ENSCLAG00000003905)	MTSS2 (ENSCLAG00000003423)	IL34 (ENSCLAG00000003136)	SF3B3 (ENSCLAG00000003921)	COG4 (ENSCLAG00000006686)	FCSK (ENSCLAG00000005770)	ST3GAL2 (ENSCLAG00000005263)	DDX19A (ENSCLAG00000004996)	DDX19B (ENSCLAG00000005224)	AARS1 (ENSCLAG00000004366)	EXOSC6 (ENSCLAG00000004121)	ENSCLAG00000003813
Degu	MODERN SPECIES	52	ENSODEG00000014769	PMFBP1 (ENSODEG00000015934)	DHX38 (ENSODEG00000015472)	ENSODEG00000014409	TXNL4B (ENSODEG00000015111)	ENSODEG00000014494	DHODH (ENSODEG00000015071)	ENSODEG00000014270	ZNF821 (ENSODEG00000014215)	ATXN1L (ENSODEG00000015180)	AP1G1 (ENSODEG00000014660)	PHLPP2 (ENSODEG00000014074)	ENSODEG00000014262	TAT (ENSODEG00000014121)	ENSODEG00000014851	ENSODEG00000014032 ##22	ENSODEG00000014592	ENSODEG00000014323	VAC14 (ENSODEG00000014293)	MTSS2 (ENSODEG00000013647)	IL34 (ENSODEG00000014364)	SF3B3 (ENSODEG00000014154)	ENSODEG00000014686	FCSK (ENSODEG00000014046)	ENSODEG00000020190	ST3GAL2 (ENSODEG00000013892)	DDX19A (ENSODEG00000014238)	DDX19B (ENSODEG00000014050)	ENSODEG00000014435	EXOSC6 (ENSODEG00000020448)	ENSODEG00000014787
Guinea pig	MODERN SPECIES	22	ZFHX3 (ENSCPOG00000009111)	PMFBP1 (ENSCPOG00000027263)	DHX38 (ENSCPOG00000013965)	TXNL4B (ENSCPOG00000039105)	ENSCPOG00000013956	DHODH (ENSCPOG00000006657)	IST1 (ENSCPOG00000012836)	ZNF821 (ENSCPOG00000005644)	ATXN1L (ENSCPOG00000033756)	AP1G1 (ENSCPOG00000010912)	PHLPP2 (ENSCPOG00000012158)	ENSCPOG00000012155	TAT (ENSCPOG00000008010)	CHST4 (ENSCPOG00000021963)	ZNF23 (ENSCPOG00000040137)	ENSCPOG00000021516 ##22	CALB2 (ENSCPOG00000010380)	CMTR2 (ENSCPOG00000015680)	ENSCPOG00000031446	VAC14 (ENSCPOG00000001773)	MTSS2 (ENSCPOG00000021684)	IL34 (ENSCPOG00000039462)	SF3B3 (ENSCPOG00000000586)	COG4 (ENSCPOG00000015042)	FCSK (ENSCPOG00000015035)	ST3GAL2 (ENSCPOG00000035552)	DDX19B (ENSCPOG00000006743)	AARS1 (ENSCPOG00000002373)	ENSCPOG00000002371	ENSCPOG00000002368	PDPR (ENSCPOG00000020169)
Sciuridae	ANCESTRAL SPECIES	5	ENSGT00930000152997	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01100000264521	ENSGT00940000157335	ENSGT00940000153348.A
Marmotini	ANCESTRAL SPECIES	17	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00530000063506.B.p	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01100000264521	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Marmotini_b	ANCESTRAL SPECIES	7	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00530000063506.B.p	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01100000264521	ENSGT00940000157335	ENSGT00940000153348.A
Arctic ground squirrel	MODERN SPECIES	209	TXNL4B (ENSUPAG00010014339)	ENSUPAG00010014354	DHODH (ENSUPAG00010014366)	IST1 (ENSUPAG00010014404)	ENSUPAG00010014442	ZNF821 (ENSUPAG00010014449)	ATXN1L (ENSUPAG00010014478)	ENSUPAG00010014485	AP1G1 (ENSUPAG00010014505)	PHLPP2 (ENSUPAG00010014596)	ENSUPAG00010014635	TAT (ENSUPAG00010014676)	ENSUPAG00010014699	CHST4 (ENSUPAG00010014722)	ZNF23 (ENSUPAG00010014732)	TLE7 (ENSUPAG00010014743) ##22	CALB2 (ENSUPAG00010014770)	CMTR2 (ENSUPAG00010014810)	ENSUPAG00010014815	ENSUPAG00010014837	VAC14 (ENSUPAG00010014840)	MTSS2 (ENSUPAG00010014858)	IL34 (ENSUPAG00010014920)	SF3B3 (ENSUPAG00010014970)	COG4 (ENSUPAG00010015009)	FCSK (ENSUPAG00010015050)	ENSUPAG00010015068	ST3GAL2 (ENSUPAG00010015073)	ENSUPAG00010015095	DDX19B (ENSUPAG00010015108)	ENSUPAG00010015150
Squirrel	MODERN SPECIES	75	DHX38 (ENSSTOG00000000534)	TXNL4B (ENSSTOG00000023037)	ENSSTOG00000022622	DHODH (ENSSTOG00000025792)	IST1 (ENSSTOG00000001021)	ZNF821 (ENSSTOG00000015313)	ATXN1L (ENSSTOG00000024179)	ENSSTOG00000024576	AP1G1 (ENSSTOG00000015309)	PHLPP2 (ENSSTOG00000022464)	MARVELD3 (ENSSTOG00000023784)	TAT (ENSSTOG00000003062)	ENSSTOG00000022167	CHST4 (ENSSTOG00000003061)	ZNF23 (ENSSTOG00000033277)	TLE7 (ENSSTOG00000026085) ##22	CALB2 (ENSSTOG00000008228)	CMTR2 (ENSSTOG00000029180)	ENSSTOG00000032230	VAC14 (ENSSTOG00000010625)	MTSS2 (ENSSTOG00000022597)	IL34 (ENSSTOG00000015365)	SF3B3 (ENSSTOG00000007065)	COG4 (ENSSTOG00000007026)	FCSK (ENSSTOG00000006970)	ST3GAL2 (ENSSTOG00000006961)	DDX19A (ENSSTOG00000006938)	DDX19B (ENSSTOG00000025733)	AARS1 (ENSSTOG00000006856)	EXOSC6 (ENSSTOG00000006849)	ENSSTOG00000010164
Alpin marmot	MODERN SPECIES	43	ENSMMMG00000013778	DHODH (ENSMMMG00000013750)	IST1 (ENSMMMG00000013737)	ZNF821 (ENSMMMG00000013710)	ATXN1L (ENSMMMG00000013701)	ENSMMMG00000013690	AP1G1 (ENSMMMG00000013614)	PHLPP2 (ENSMMMG00000013569)	ENSMMMG00000013559	TAT (ENSMMMG00000013543)	ENSMMMG00000013540	CHST4 (ENSMMMG00000013537)	ENSMMMG00000013533	ENSMMMG00000013530	ENSMMMG00000013523	TLE7 (ENSMMMG00000013498) ##22	CALB2 (ENSMMMG00000013442)	CMTR2 (ENSMMMG00000013435)	ENSMMMG00000013413	VAC14 (ENSMMMG00000013378)	IL34 (ENSMMMG00000013345)	SF3B3 (ENSMMMG00000013300)	COG4 (ENSMMMG00000013279)	FCSK (ENSMMMG00000013204)	ST3GAL2 (ENSMMMG00000013190)	ENSMMMG00000013185	DDX19A (ENSMMMG00000013166)	DDX19B (ENSMMMG00000013116)	AARS1 (ENSMMMG00000013100)	ENSMMMG00000013087	PDPR (ENSMMMG00000013052)
Eurasian red squirrel	MODERN SPECIES	8	DHX38 (ENSSVLG00005023788)	TXNL4B (ENSSVLG00005023768)	ENSSVLG00005023691	DHODH (ENSSVLG00005023635)	ENSSVLG00005023609	ENSSVLG00005023582	IST1 (ENSSVLG00005023547)	ZNF821 (ENSSVLG00005023459)	ATXN1L (ENSSVLG00005023433)	AP1G1 (ENSSVLG00005023353)	PHLPP2 (ENSSVLG00005023221)	ENSSVLG00005023175	TAT (ENSSVLG00005023106)	CHST4 (ENSSVLG00005023084)	ENSSVLG00005023073	TLE7 (ENSSVLG00005023018) ##22	CALB2 (ENSSVLG00005022894)	CMTR2 (ENSSVLG00005022862)	ENSSVLG00005022847	ENSSVLG00005022799	HYDIN (ENSSVLG00005021881)	VAC14 (ENSSVLG00005021756)	MTSS2 (ENSSVLG00005021695)	ENSSVLG00005021652	SF3B3 (ENSSVLG00005021597)	COG4 (ENSSVLG00005021216)	FCSK (ENSSVLG00005021026)	ST3GAL2 (ENSSVLG00005020988)	ENSSVLG00005020944	DDX19A (ENSSVLG00005020899)	ENSSVLG00005020737
Lagomorpha	ANCESTRAL SPECIES	19	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01100000264521	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00900000141128
Rabbit	MODERN SPECIES	16	ENSOCUG00000009058	DHODH (ENSOCUG00000009053)	PKD1L3 (ENSOCUG00000009030)	IST1 (ENSOCUG00000009022)	ZNF821 (ENSOCUG00000009019)	ATXN1L (ENSOCUG00000021960)	ENSOCUG00000026433	ENSOCUG00000021407	AP1G1 (ENSOCUG00000004412)	PHLPP2 (ENSOCUG00000009972)	ENSOCUG00000029885	TAT (ENSOCUG00000009957)	CHST4 (ENSOCUG00000009954)	ENSOCUG00000036631	ENSOCUG00000038742	TLE7 (ENSOCUG00000024140) ##22	CALB2 (ENSOCUG00000015619)	CMTR2 (ENSOCUG00000010218)	ENSOCUG00000022443	HYDIN (ENSOCUG00000011895)	VAC14 (ENSOCUG00000021280)	MTSS2 (ENSOCUG00000015113)	IL34 (ENSOCUG00000022125)	SF3B3 (ENSOCUG00000004139)	COG4 (ENSOCUG00000004130)	FCSK (ENSOCUG00000004115)	ENSOCUG00000024306	ST3GAL2 (ENSOCUG00000004107)	DDX19A (ENSOCUG00000038134)	ENSOCUG00000030722	DDX19B (ENSOCUG00000004095)
Primates	ANCESTRAL SPECIES	21	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT00970000193437
Haplorrhini	ANCESTRAL SPECIES	21	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT00970000193437
Simiiformes	ANCESTRAL SPECIES	21	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.b	ENSGT00970000193437.a.b	ENSGT00940000154417.a.a	ENSGT00970000193437.b
Catarrhini	ANCESTRAL SPECIES	11	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b	ENSGT00970000193437.a.b
Cercopithecidae	ANCESTRAL SPECIES	8	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b
Cercopithecinae	ANCESTRAL SPECIES	10	ENSGT00390000010779.a.b.b.e.b	ENSGT00940000159903.e	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b
Cercopithecinae_a	ANCESTRAL SPECIES	10	ENSGT00390000010779.a.b.b.e.b	ENSGT00940000159903.e	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00970000193437.b
Macaca	ANCESTRAL SPECIES	8	ENSGT00940000159903.f.b	ENSGT00940000159903.f.a	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385.cb	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00970000193437.b	ENSGT00940000154417.a.b
Pig-tailed macaque	MODERN SPECIES	178	TXNL4B (ENSMNEG00000022695)	ENSMNEG00000039642	ENSMNEG00000029208	DHODH (ENSMNEG00000007299)	ENSMNEG00000034228	PKD1L3 (ENSMNEG00000029203)	IST1 (ENSMNEG00000027239)	ZNF821 (ENSMNEG00000030924)	ATXN1L (ENSMNEG00000021671)	AP1G1 (ENSMNEG00000034875)	PHLPP2 (ENSMNEG00000014597)	TAT (ENSMNEG00000013690)	CHST4 (ENSMNEG00000011122)	ZNF19 (ENSMNEG00000030393)	ZNF23 (ENSMNEG00000037222)	TLE7 (ENSMNEG00000027661) ##22	CALB2 (ENSMNEG00000039061)	HYDIN (ENSMNEG00000029763)	ENSMNEG00000040729	VAC14 (ENSMNEG00000042022)	MTSS2 (ENSMNEG00000043277)	IL34 (ENSMNEG00000005062)	SF3B3 (ENSMNEG00000033385)	COG4 (ENSMNEG00000032102)	FCSK (ENSMNEG00000043191)	ST3GAL2 (ENSMNEG00000042149)	ENSMNEG00000040748	ENSMNEG00000030650	DDX19B (ENSMNEG00000043684)	AARS1 (ENSMNEG00000014902)	ENSMNEG00000028332
Macaca_a	ANCESTRAL SPECIES	14	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.b	ENSGT00940000159903.f.b	ENSGT00940000159903.f.a	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385.cb	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00900000141128
Rhesus	MODERN SPECIES	12	ENSMMUG00000000672	HP (ENSMMUG00000023312)	PKD1L3 (ENSMMUG00000016717)	ENSMMUG00000054704	IST1 (ENSMMUG00000009688)	ENSMMUG00000052570	ZNF821 (ENSMMUG00000016716)	ATXN1L (ENSMMUG00000048077)	AP1G1 (ENSMMUG00000010878)	PHLPP2 (ENSMMUG00000012007)	MARVELD3 (ENSMMUG00000052324)	TAT (ENSMMUG00000002018)	ZNF19 (ENSMMUG00000008408)	CHST4 (ENSMMUG00000061967)	ZNF23 (ENSMMUG00000008405)	TLE7 (ENSMMUG00000008404) ##22	CALB2 (ENSMMUG00000008403)	CMTR2 (ENSMMUG00000005808)	HYDIN (ENSMMUG00000005805)	VAC14 (ENSMMUG00000020421)	MTSS2 (ENSMMUG00000020416)	IL34 (ENSMMUG00000020415)	SF3B3 (ENSMMUG00000017812)	COG4 (ENSMMUG00000003171)	FCSK (ENSMMUG00000003174)	ST3GAL2 (ENSMMUG00000057933)	ENSMMUG00000020316	AARS1 (ENSMMUG00000021653)	CLEC18A (ENSMMUG00000009424)	PDPR (ENSMMUG00000023147)	GLG1 (ENSMMUG00000000226)
Crab-eating macaque	MODERN SPECIES	12	ENSMFAG00000043897	ENSMFAG00000003873	ENSMFAG00000002142	DHODH (ENSMFAG00000043915)	ENSMFAG00000031223	ZNF821 (ENSMFAG00000029323)	ATXN1L (ENSMFAG00000029752)	AP1G1 (ENSMFAG00000037769)	PHLPP2 (ENSMFAG00000037146)	ENSMFAG00000058923	ENSMFAG00000043332	TAT (ENSMFAG00000040591)	ZNF19 (ENSMFAG00000040094)	CHST4 (ENSMFAG00000062514)	ZNF23 (ENSMFAG00000028694)	TLE7 (ENSMFAG00000030917) ##22	CALB2 (ENSMFAG00000045637)	CMTR2 (ENSMFAG00000001058)	HYDIN (ENSMFAG00000002730)	VAC14 (ENSMFAG00000040036)	ENSMFAG00000060882	MTSS2 (ENSMFAG00000003097)	IL34 (ENSMFAG00000004902)	SF3B3 (ENSMFAG00000045487)	COG4 (ENSMFAG00000032596)	FCSK (ENSMFAG00000036078)	ST3GAL2 (ENSMFAG00000033155)	DDX19B (ENSMFAG00000030922)	AARS1 (ENSMFAG00000002309)	ENSMFAG00000006545	PDPR (ENSMFAG00000044314)
Cercopithecinae_b	ANCESTRAL SPECIES	5	ENSGT00940000159903.f	ENSGT00940000159903.e	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00970000193437.b
Cercopithecinae_d	ANCESTRAL SPECIES	4	ENSGT00940000159903.f	ENSGT00940000159903.e	ENSGT00500000044924	ENSGT00390000004380.m.a.a.a.b	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00610000086095	ENSGT00390000008385	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00970000193437.b	ENSGT00940000154417.a.b
Sooty mangabey	MODERN SPECIES	96	ENSCATG00000038853	ENSCATG00000023916	DHODH (ENSCATG00000029035)	ENSCATG00000028100	PKD1L3 (ENSCATG00000029250)	IST1 (ENSCATG00000035125)	ZNF821 (ENSCATG00000041957)	ATXN1L (ENSCATG00000003251)	AP1G1 (ENSCATG00000039020)	PHLPP2 (ENSCATG00000040091)	MARVELD3 (ENSCATG00000042311)	TAT (ENSCATG00000042511)	CHST4 (ENSCATG00000005295)	ZNF19 (ENSCATG00000031355)	ZNF23 (ENSCATG00000038169)	TLE7 (ENSCATG00000037920) ##22	CALB2 (ENSCATG00000038501)	HYDIN (ENSCATG00000038202)	VAC14 (ENSCATG00000037184)	MTSS2 (ENSCATG00000034025)	IL34 (ENSCATG00000031170)	SF3B3 (ENSCATG00000036562)	COG4 (ENSCATG00000039133)	FCSK (ENSCATG00000037116)	ST3GAL2 (ENSCATG00000030871)	ENSCATG00000016488	DDX19A (ENSCATG00000042567)	ENSCATG00000036922	DDX19B (ENSCATG00000040004)	AARS1 (ENSCATG00000032821)	ENSCATG00000035902
Drill	MODERN SPECIES	602	ENSMLEG00000011747	ENSMLEG00000043651	DHODH (ENSMLEG00000031692)	ENSMLEG00000033718	PKD1L3 (ENSMLEG00000037167)	IST1 (ENSMLEG00000038101)	ZNF821 (ENSMLEG00000040396)	ATXN1L (ENSMLEG00000021268)	AP1G1 (ENSMLEG00000040277)	PHLPP2 (ENSMLEG00000031082)	ENSMLEG00000025861	TAT (ENSMLEG00000027145)	CHST4 (ENSMLEG00000018150)	ZNF19 (ENSMLEG00000036284)	ZNF23 (ENSMLEG00000040603)	TLE7 (ENSMLEG00000044319) ##22	CALB2 (ENSMLEG00000039629)	HYDIN (ENSMLEG00000029501)	VAC14 (ENSMLEG00000042911)	ENSMLEG00000044321	MTSS2 (ENSMLEG00000032544)	IL34 (ENSMLEG00000043846)	SF3B3 (ENSMLEG00000043891)	COG4 (ENSMLEG00000036803)	FCSK (ENSMLEG00000031685)	ST3GAL2 (ENSMLEG00000000767)	DDX19A (ENSMLEG00000030395)	ENSMLEG00000028801	ENSMLEG00000042907	ENSMLEG00000013012	AARS1 (ENSMLEG00000035037)
Olive baboon	MODERN SPECIES	9	TXNL4B (ENSPANG00000023246)	ENSPANG00000046079	DHODH (ENSPANG00000009861)	ENSPANG00000039086	PKD1L3 (ENSPANG00000006310)	IST1 (ENSPANG00000026152)	ZNF821 (ENSPANG00000007150)	ATXN1L (ENSPANG00000002490)	AP1G1 (ENSPANG00000016832)	PHLPP2 (ENSPANG00000016383)	MARVELD3 (ENSPANG00000049338)	TAT (ENSPANG00000018042)	CHST4 (ENSPANG00000005478)	ZNF19 (ENSPANG00000031418)	ZNF23 (ENSPANG00000017859)	TLE7 (ENSPANG00000029222) ##22	CALB2 (ENSPANG00000016519)	CMTR2 (ENSPANG00000050682)	HYDIN (ENSPANG00000005685)	VAC14 (ENSPANG00000018041)	MTSS2 (ENSPANG00000018427)	IL34 (ENSPANG00000045929)	ENSPANG00000041873	SF3B3 (ENSPANG00000024075)	COG4 (ENSPANG00000008156)	FCSK (ENSPANG00000009922)	ST3GAL2 (ENSPANG00000018763)	DDX19A (ENSPANG00000033008)	AARS1 (ENSPANG00000020452)	EXOSC6 (ENSPANG00000003331)	ENSPANG00000007021
Rhinopithecus	ANCESTRAL SPECIES	79									ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000163278	ENSGT00940000154517.e.b.b.a	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00610000086095	ENSGT00390000008385	ENSGT00910000147300	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.b.b	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00970000193437.a.b.a	ENSGT00940000157335
Black snub-nosed monkey	MODERN SPECIES	255					PROX1 (ENSRBIG00000040759)	SMYD2 (ENSRBIG00000030110)	PTPN14 (ENSRBIG00000021235)	CENPF (ENSRBIG00000031040)	AP1G1 (ENSRBIG00000018408)	PHLPP2 (ENSRBIG00000042103)	MARVELD3 (ENSRBIG00000034252)	TAT (ENSRBIG00000034409)	ENSRBIG00000031232	ZNF19 (ENSRBIG00000033441)	ZNF23 (ENSRBIG00000035403)	TLE7 (ENSRBIG00000034413) ##22	CALB2 (ENSRBIG00000040466)	HYDIN (ENSRBIG00000028337)	ENSRBIG00000005851	VAC14 (ENSRBIG00000031397)	MTSS2 (ENSRBIG00000030014)	IL34 (ENSRBIG00000034462)	SF3B3 (ENSRBIG00000021904)	COG4 (ENSRBIG00000039844)	FCSK (ENSRBIG00000037250)	ST3GAL2 (ENSRBIG00000009897)	ENSRBIG00000042392	ENSRBIG00000037283	DDX19B (ENSRBIG00000037555)	EXOSC6 (ENSRBIG00000003409)	AARS1 (ENSRBIG00000032650)
Golden snub-nosed monkey	MODERN SPECIES	2895									AP1G1 (ENSRROG00000025423)	PHLPP2 (ENSRROG00000041478)	MARVELD3 (ENSRROG00000038820)	TAT (ENSRROG00000035357)	ZNF19 (ENSRROG00000045114)	ENSRROG00000038973	ZNF23 (ENSRROG00000031965)	TLE7 (ENSRROG00000035025) ##22	CALB2 (ENSRROG00000044710)
Hominoidea	ANCESTRAL SPECIES	9	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903.g.a	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453.db	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b	ENSGT00940000157335
Hominidae	ANCESTRAL SPECIES	9	ENSGT00940000159903.g.b	ENSGT00940000159903.g.a	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453.db	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b	ENSGT00940000157335
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	19	ENSGT00940000159903.g.b.a	ENSGT00940000159903.g.a	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453.db	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b	ENSGT00940000157335
Homo/Pan group	ANCESTRAL SPECIES	19	ENSGT00940000159903.g.b.b	ENSGT00940000159903.g.a	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453.db	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b	ENSGT00940000157335
Pan	ANCESTRAL SPECIES	19	ENSGT00500000044924	ENSGT00550000074846.j	ENSGT00390000004380.m.b.b	ENSGT00940000162813	ENSGT00390000007453.db	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.a	ENSGT00940000154417.a.a	ENSGT00970000193437.b	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Chimpanzee	MODERN SPECIES	7	DHODH (ENSPTRG00000008333)	ENSPTRG00000048394	ENSPTRG00000048929	PKD1L3 (ENSPTRG00000051796)	IST1 (ENSPTRG00000051566)	ZNF821 (ENSPTRG00000008328)	ATXN1L (ENSPTRG00000039075)	AP1G1 (ENSPTRG00000008327)	ENSPTRG00000052600	PHLPP2 (ENSPTRG00000008326)	MARVELD3 (ENSPTRG00000008325)	TAT (ENSPTRG00000008324)	CHST4 (ENSPTRG00000008323)	ZNF19 (ENSPTRG00000008322)	ZNF23 (ENSPTRG00000008321)	TLE7 (ENSPTRG00000045587) ##22	CALB2 (ENSPTRG00000008320)	ENSPTRG00000050692	HYDIN (ENSPTRG00000008315)	VAC14 (ENSPTRG00000008313)	MTSS2 (ENSPTRG00000008310)	IL34 (ENSPTRG00000008309)	SF3B3 (ENSPTRG00000008308)	COG4 (ENSPTRG00000008304)	FCSK (ENSPTRG00000008303)	ST3GAL2 (ENSPTRG00000052488)	ENSPTRG00000046184	ENSPTRG00000008301	ENSPTRG00000045644	DDX19B (ENSPTRG00000008298)	AARS1 (ENSPTRG00000008297)
Bonobo	MODERN SPECIES	7	HP (ENSPPAG00000038234)	DHODH (ENSPPAG00000039835)	ENSPPAG00000027200	ENSPPAG00000000053	PKD1L3 (ENSPPAG00000029013)	IST1 (ENSPPAG00000043761)	ZNF821 (ENSPPAG00000027597)	AP1G1 (ENSPPAG00000031149)	ENSPPAG00000025093	PHLPP2 (ENSPPAG00000039108)	ENSPPAG00000040363	TAT (ENSPPAG00000038577)	CHST4 (ENSPPAG00000033145)	ZNF19 (ENSPPAG00000016077)	ZNF23 (ENSPPAG00000001288)	TLE7 (ENSPPAG00000041643) ##22	CALB2 (ENSPPAG00000041681)	HYDIN (ENSPPAG00000038001)	VAC14 (ENSPPAG00000028066)	MTSS2 (ENSPPAG00000013648)	IL34 (ENSPPAG00000043575)	SF3B3 (ENSPPAG00000026807)	COG4 (ENSPPAG00000028917)	FCSK (ENSPPAG00000028024)	ST3GAL2 (ENSPPAG00000042167)	ENSPPAG00000019470	DDX19A (ENSPPAG00000004913)	ENSPPAG00000044132	DDX19B (ENSPPAG00000032747)	AARS1 (ENSPPAG00000040404)	WWP2 (ENSPPAG00000024904)
Human	MODERN SPECIES	7	HPR (ENSG00000261701)	HP (ENSG00000257017)	TXNL4B (ENSG00000140830)	DHODH (ENSG00000102967)	PKD1L3 (ENSG00000277481)	ZNF821 (ENSG00000102984)	IST1 (ENSG00000182149)	ATXN1L (ENSG00000224470)	AP1G1 (ENSG00000166747)	PHLPP2 (ENSG00000040199)	MARVELD3 (ENSG00000140832)	TAT (ENSG00000198650)	CHST4 (ENSG00000140835)	ZNF19 (ENSG00000157429)	ZNF23 (ENSG00000167377)	TLE7 (ENSG00000260734) ##22	CALB2 (ENSG00000172137)	CMTR2 (ENSG00000180917)	HYDIN (ENSG00000157423)	VAC14 (ENSG00000103043)	MTSS2 (ENSG00000132613)	IL34 (ENSG00000157368)	SF3B3 (ENSG00000189091)	COG4 (ENSG00000103051)	FCSK (ENSG00000157353)	ST3GAL2 (ENSG00000157350)	DDX19A (ENSG00000168872)	ENSG00000260537	DDX19B (ENSG00000157349)	AARS1 (ENSG00000090861)	EXOSC6 (ENSG00000223496)
Gorilla	MODERN SPECIES	7	HP (ENSGGOG00000013039)	DHODH (ENSGGOG00000013030)	ENSGGOG00000041291	PKD1L3 (ENSGGOG00000007972)	ENSGGOG00000001863	ZNF821 (ENSGGOG00000005863)	ATXN1L (ENSGGOG00000042719)	AP1G1 (ENSGGOG00000004800)	ENSGGOG00000040287	PHLPP2 (ENSGGOG00000008841)	ENSGGOG00000008844	TAT (ENSGGOG00000004693)	CHST4 (ENSGGOG00000015794)	ZNF19 (ENSGGOG00000009654)	ZNF23 (ENSGGOG00000015579)	TLE7 (ENSGGOG00000027068) ##22	CALB2 (ENSGGOG00000017027)	HYDIN (ENSGGOG00000013091)	VAC14 (ENSGGOG00000013079)	MTSS2 (ENSGGOG00000013069)	IL34 (ENSGGOG00000013065)	SF3B3 (ENSGGOG00000003246)	COG4 (ENSGGOG00000005952)	FCSK (ENSGGOG00000005949)	ST3GAL2 (ENSGGOG00000008822)	ENSGGOG00000037732	DDX19A (ENSGGOG00000008816)	ENSGGOG00000040420	DDX19B (ENSGGOG00000036768)	AARS (ENSGGOG00000008737)	ENSGGOG00000009747
Orangutan	MODERN SPECIES	7	HP (ENSPPYG00000007518)	ENSPPYG00000040464	DHODH (ENSPPYG00000007520)	PKD1L3 (ENSPPYG00000007521)	IST1 (ENSPPYG00000007522)	ZNF821 (ENSPPYG00000007523)	ATXN1L (ENSPPYG00000029718)	AP1G1 (ENSPPYG00000007524)	ENSPPYG00000007525	PHLPP2 (ENSPPYG00000007526)	ENSPPYG00000007527	TAT (ENSPPYG00000007528)	CHST4 (ENSPPYG00000007529)	ZNF19 (ENSPPYG00000007530)	ZNF23 (ENSPPYG00000007531)	TLE7 (ENSPPYG00000036331) ##22	CALB2 (ENSPPYG00000029672)	CMTR2 (ENSPPYG00000007532)	HYDIN (ENSPPYG00000007533)	VAC14 (ENSPPYG00000007534)	ENSPPYG00000033730	MTSS2 (ENSPPYG00000007536)	IL34 (ENSPPYG00000039296)	SF3B3 (ENSPPYG00000007539)	COG4 (ENSPPYG00000007540)	FCSK (ENSPPYG00000007541)	ST3GAL2 (ENSPPYG00000007542)	DDX19A (ENSPPYG00000007543)	AARS1 (ENSPPYG00000007544)	EXOSC6 (ENSPPYG00000007545)	ENSPPYG00000007546
Gibbon	MODERN SPECIES	11	TXNL4B (ENSNLEG00000005688)	HP (ENSNLEG00000005694)	DHODH (ENSNLEG00000005701)	ENSNLEG00000031913	PKD1L3 (ENSNLEG00000005720)	IST1 (ENSNLEG00000005733)	ZNF821 (ENSNLEG00000029369)	ATXN1L (ENSNLEG00000018378)	AP1G1 (ENSNLEG00000032381)	ENSNLEG00000031762	PHLPP2 (ENSNLEG00000005761)	ENSNLEG00000027098	TAT (ENSNLEG00000005777)	ZNF19 (ENSNLEG00000005791)	ZNF23 (ENSNLEG00000005799)	TLE7 (ENSNLEG00000005803) ##22	ENSNLEG00000016234	HYDIN (ENSNLEG00000016191)	VAC14 (ENSNLEG00000016161)	MTSS2 (ENSNLEG00000016152)	IL34 (ENSNLEG00000016145)	SF3B3 (ENSNLEG00000016127)	COG4 (ENSNLEG00000016124)	FCSK (ENSNLEG00000016111)	ST3GAL2 (ENSNLEG00000031196)	ENSNLEG00000029991	DDX19A (ENSNLEG00000016042)	ENSNLEG00000034963	DDX19B (ENSNLEG00000029325)	ENSNLEG00000027423	ENSNLEG00000013877
Platyrrhini	ANCESTRAL SPECIES	21	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00550000076357	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.b	ENSGT00940000154417.a.a	ENSGT00970000193437.a.a	ENSGT00940000164150	ENSGT00940000154417.a.b
Cebidae	ANCESTRAL SPECIES	21	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00970000193437.a.b	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00940000154417.a.b	ENSGT00940000157335
Cebidae_a	ANCESTRAL SPECIES	37	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.b	ENSGT00970000193437.a.b	ENSGT00940000154417.a.a	ENSGT00940000164150	ENSGT00940000157335	ENSGT00940000153348.A
Capuchin	MODERN SPECIES	117	LSM3 (ENSCCAG00000032763)	STX18 (ENSCCAG00000023114)	NSG1 (ENSCCAG00000031880)	ENSCCAG00000023428	LYAR (ENSCCAG00000023180)	TMEM128 (ENSCCAG00000025079)	OTOP1 (ENSCCAG00000036786)	SLC2A9 (ENSCCAG00000031331)	ATXN1L (ENSCCAG00000019464)	AP1G1 (ENSCCAG00000037984)	PHLPP2 (ENSCCAG00000020735)	MARVELD3 (ENSCCAG00000024099)	TAT (ENSCCAG00000026607)	ZNF19 (ENSCCAG00000020838)	ZNF23 (ENSCCAG00000023817)	TLE7 (ENSCCAG00000030012) ##22	CALB2 (ENSCCAG00000035047)	ENSCCAG00000021822
Bolivian squirrel monkey	MODERN SPECIES	162	TXNL4B (ENSSBOG00000019797)	ENSSBOG00000019806	DHODH (ENSSBOG00000025483)	PKD1L3 (ENSSBOG00000020403)	IST1 (ENSSBOG00000022453)	ZNF821 (ENSSBOG00000036272)	ATXN1L (ENSSBOG00000018954)	AP1G1 (ENSSBOG00000025975)	ENSSBOG00000019921	PHLPP2 (ENSSBOG00000024623)	ENSSBOG00000030124	ENSSBOG00000014909	TAT (ENSSBOG00000031651)	ZNF19 (ENSSBOG00000022120)	ZNF23 (ENSSBOG00000024458)	TLE7 (ENSSBOG00000004053) ##22	CALB2 (ENSSBOG00000007144)	HYDIN (ENSSBOG00000020168)	VAC14 (ENSSBOG00000028547)	MTSS2 (ENSSBOG00000028964)	IL34 (ENSSBOG00000018734)	SF3B3 (ENSSBOG00000029156)	COG4 (ENSSBOG00000029479)	FCSK (ENSSBOG00000022951)	ENSSBOG00000020473	ST3GAL2 (ENSSBOG00000035352)	ENSSBOG00000029716	DDX19A (ENSSBOG00000031482)	ENSSBOG00000034490	AARS1 (ENSSBOG00000022141)	EXOSC6 (ENSSBOG00000027402)
Marmoset	DUPLICATION
Marmoset	MODERN SPECIES	12	ENSCJAG00000015091	DHODH (ENSCJAG00000015085)	PKD1L3 (ENSCJAG00000015072)	IST1 (ENSCJAG00000015051)	ZNF821 (ENSCJAG00000015044)	ATXN1L (ENSCJAG00000033007)	AP1G1 (ENSCJAG00000015028)	PHLPP2 (ENSCJAG00000015005)	ENSCJAG00000044719	TAT (ENSCJAG00000014984)	ENSCJAG00000070838	CHST4 (ENSCJAG00000022069)	ENSCJAG00000081725	ZNF19 (ENSCJAG00000042743)	ZNF23 (ENSCJAG00000014972)	TLE7 (ENSCJAG00000047002) ##22	CALB2 (ENSCJAG00000014962)	CMTR2 (ENSCJAG00000022068)	HYDIN (ENSCJAG00000014875)	VAC14 (ENSCJAG00000014847)	MTSS2 (ENSCJAG00000014831)	IL34 (ENSCJAG00000014830)	SF3B3 (ENSCJAG00000014773)	COG4 (ENSCJAG00000014699)	FCSK (ENSCJAG00000014678)	ST3GAL2 (ENSCJAG00000014673)	DDX19B (ENSCJAG00000056923)	AARS1 (ENSCJAG00000014562)	EXOSC6 (ENSCJAG00000014559)	ENSCJAG00000014539	PDPR (ENSCJAG00000014501)
Marmoset	MODERN SPECIES	6	ZXDC (ENSCJAG00000006974)	CFAP100 (ENSCJAG00000006945)	KLF15 (ENSCJAG00000006941)	ALDH1L1 (ENSCJAG00000006865)	SLC41A3 (ENSCJAG00000006850)	ENSCJAG00000083009	OSBPL11 (ENSCJAG00000006828)	ZNF148 (ENSCJAG00000006741)	SLC12A8 (ENSCJAG00000006687)	HEG1 (ENSCJAG00000006666)	MUC13 (ENSCJAG00000006640)	ITGB5 (ENSCJAG00000006606)	UMPS (ENSCJAG00000006554)	KALRN (ENSCJAG00000006440)	ENSCJAG00000084441	ENSCJAG00000068654 ##22	ENSCJAG00000072260	ENSCJAG00000048078	ENSCJAG00000015908	ENSCJAG00000073509	MYLK (ENSCJAG00000007474)	ENSCJAG00000045524	ADCY5 (ENSCJAG00000007619)	SEC22A (ENSCJAG00000007704)	PDIA5 (ENSCJAG00000007712)	SEMA5B (ENSCJAG00000007825)	SLC49A4 (ENSCJAG00000007855)	HSPBAP1 (ENSCJAG00000007911)	PARP14 (ENSCJAG00000007930)	ENSCJAG00000052552	ENSCJAG00000072088
Mas night monkey	MODERN SPECIES	630	TXNL4B (ENSANAG00000002026)	ENSANAG00000032040	DHODH (ENSANAG00000021540)	PKD1L3 (ENSANAG00000027705)	IST1 (ENSANAG00000037291)	ZNF821 (ENSANAG00000022965)	ATXN1L (ENSANAG00000019233)	AP1G1 (ENSANAG00000038192)	ENSANAG00000029502	PHLPP2 (ENSANAG00000022421)	ENSANAG00000038161	ENSANAG00000026887	TAT (ENSANAG00000022303)	ZNF19 (ENSANAG00000036944)	ZNF23 (ENSANAG00000023821)	TLE7 (ENSANAG00000026986) ##22	CALB2 (ENSANAG00000028283)	CMTR2 (ENSANAG00000019323)	HYDIN (ENSANAG00000017843)	VAC14 (ENSANAG00000035555)	MTSS2 (ENSANAG00000029749)	IL34 (ENSANAG00000020829)	ENSANAG00000031734	SF3B3 (ENSANAG00000028001)	COG4 (ENSANAG00000033182)	FCSK (ENSANAG00000025413)	ST3GAL2 (ENSANAG00000036071)	DDX19A (ENSANAG00000023580)	ENSANAG00000037769	DDX19B (ENSANAG00000028844)	ENSANAG00000025981
Tarsier	MODERN SPECIES	6462								AP1G1 (ENSTSYG00000012088)	PHLPP2 (ENSTSYG00000001574)	MARVELD3 (ENSTSYG00000001573)	ENSTSYG00000035084	TAT (ENSTSYG00000005994)	ENSTSYG00000036352	ZNF19 (ENSTSYG00000009620)	ZNF23 (ENSTSYG00000036410)	TLE7 (ENSTSYG00000028855) ##22	CALB2 (ENSTSYG00000006695)
Strepsirrhini	ANCESTRAL SPECIES	17	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT00970000193437	ENSGT00940000157335
Lemuriformes	ANCESTRAL SPECIES	31	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT00970000193437	ENSGT00940000157335
Lemuriformes_a	ANCESTRAL SPECIES	29	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT00970000193437	ENSGT00940000164150
Coquerels sifaka	MODERN SPECIES	821	PMFBP1 (ENSPCOG00000016076)	DHX38 (ENSPCOG00000027770)	TXNL4B (ENSPCOG00000022090)	ENSPCOG00000024816	DHODH (ENSPCOG00000019100)	PKD1L3 (ENSPCOG00000015592)	IST1 (ENSPCOG00000000811)	ZNF821 (ENSPCOG00000022023)	ATXN1L (ENSPCOG00000026781)	AP1G1 (ENSPCOG00000001512)	PHLPP2 (ENSPCOG00000015521)	ENSPCOG00000011845	TAT (ENSPCOG00000028180)	ZNF19 (ENSPCOG00000028550)	ZNF23 (ENSPCOG00000016859)	TLE7 (ENSPCOG00000008501) ##22
Greater bamboo lemur	MODERN SPECIES	192				PKD1L3 (ENSPSMG00000006527)	IST1 (ENSPSMG00000006586)	ZNF821 (ENSPSMG00000006702)	ATXN1L (ENSPSMG00000006733)	AP1G1 (ENSPSMG00000006963)	PHLPP2 (ENSPSMG00000007250)	ENSPSMG00000007271	TAT (ENSPSMG00000007281)	CHST4 (ENSPSMG00000007290)	ZNF19 (ENSPSMG00000007306)	ZNF23 (ENSPSMG00000007319)	ENSPSMG00000007327	TLE7 (ENSPSMG00000007335) ##22	CALB2 (ENSPSMG00000007416)	ENSPSMG00000007449	HYDIN (ENSPSMG00000007572)	VAC14 (ENSPSMG00000007636)	MTSS2 (ENSPSMG00000007710)	IL34 (ENSPSMG00000007733)	SF3B3 (ENSPSMG00000007782)	COG4 (ENSPSMG00000007879)	FCSK (ENSPSMG00000007949)	ST3GAL2 (ENSPSMG00000007976)
Mouse lemur	MODERN SPECIES	12	TXNL4B (ENSMICG00000030972)	ENSMICG00000033636	ENSMICG00000004153	DHODH (ENSMICG00000011378)	PKD1L3 (ENSMICG00000011328)	IST1 (ENSMICG00000011314)	ZNF821 (ENSMICG00000035245)	ATXN1L (ENSMICG00000029273)	AP1G1 (ENSMICG00000001912)	PHLPP2 (ENSMICG00000001901)	MARVELD3 (ENSMICG00000045631)	TAT (ENSMICG00000001890)	ZNF19 (ENSMICG00000001886)	CHST4 (ENSMICG00000042768)	ZNF23 (ENSMICG00000001881)	TLE7 (ENSMICG00000046469) ##22	CALB2 (ENSMICG00000001876)	HYDIN (ENSMICG00000033742)	VAC14 (ENSMICG00000001393)	MTSS2 (ENSMICG00000001380)	IL34 (ENSMICG00000043442)	SF3B3 (ENSMICG00000001363)	COG4 (ENSMICG00000001352)	FCSK (ENSMICG00000001338)	ST3GAL2 (ENSMICG00000033147)	DDX19A (ENSMICG00000000259)	DDX19B (ENSMICG00000046042)	ENSMICG00000000260	AARS1 (ENSMICG00000000255)	EXOSC6 (ENSMICG00000027202)	ENSMICG00000000254
Bushbaby	MODERN SPECIES	162	ZFHX3 (ENSOGAG00000010886)	PMFBP1 (ENSOGAG00000008669)	DHX38 (ENSOGAG00000008658)	TXNL4B (ENSOGAG00000008657)	ENSOGAG00000008652	DHODH (ENSOGAG00000008649)	IST1 (ENSOGAG00000008631)	ZNF821 (ENSOGAG00000007248)	ATXN1L (ENSOGAG00000034012)	AP1G1 (ENSOGAG00000002856)	PHLPP2 (ENSOGAG00000002853)	ENSOGAG00000031534	TAT (ENSOGAG00000002843)	CHST4 (ENSOGAG00000002840)	ZNF23 (ENSOGAG00000002834)	ENSOGAG00000031836 ##22	CALB2 (ENSOGAG00000010318)	CMTR2 (ENSOGAG00000030619)	ENSOGAG00000000065	ENSOGAG00000000064	ENSOGAG00000000062	VAC14 (ENSOGAG00000000061)	MTSS2 (ENSOGAG00000025002)	IL34 (ENSOGAG00000000060)	SF3B3 (ENSOGAG00000016051)	COG4 (ENSOGAG00000016048)	FCSK (ENSOGAG00000016043)	ST3GAL2 (ENSOGAG00000011790)	DDX19B (ENSOGAG00000011783)	AARS1 (ENSOGAG00000011601)	EXOSC6 (ENSOGAG00000034381)
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT01100000263669	ENSGT00940000154417.a.b	ENSGT00940000157335
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT01100000263669
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT01100000263669	ENSGT00940000157335
Suina	ANCESTRAL SPECIES	36	ENSGT00390000012700	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT01100000263669	ENSGT00940000157335	ENSGT00940000153348.A
Pig	MODERN SPECIES	14	DHX38 (ENSSSCG00000002748)	TXNL4B (ENSSSCG00000025218)	ENSSSCG00000050689	ENSSSCG00000002749	DHODH (ENSSSCG00000002746)	ENSSSCG00000055830	ZNF821 (ENSSSCG00000002741)	IST1 (ENSSSCG00000002743)	ATXN1L (ENSSSCG00000038917)	AP1G1 (ENSSSCG00000002740)	PHLPP2 (ENSSSCG00000002739)	MARVELD3 (ENSSSCG00000002734)	TAT (ENSSSCG00000002736)	CHST4 (ENSSSCG00000002737)	ZNF23 (ENSSSCG00000002738)	TLE7 (ENSSSCG00000043891) ##22	CALB2 (ENSSSCG00000002730)	CMTR2 (ENSSSCG00000033156)	ENSSSCG00000040973	ENSSSCG00000026790	ENSSSCG00000040993	VAC14 (ENSSSCG00000002729)	MTSS2 (ENSSSCG00000040037)	IL34 (ENSSSCG00000040629)	SF3B3 (ENSSSCG00000025323)	COG4 (ENSSSCG00000027973)	FCSK (ENSSSCG00000025425)	ST3GAL2 (ENSSSCG00000061257)	ENSSSCG00000037473	DDX19A (ENSSSCG00000060523)	ENSSSCG00000035447
Chacoan peccary	MODERN SPECIES	10	ZFHX3 (ENSCWAG00000000067)	PMFBP1 (ENSCWAG00000000119)	DHX38 (ENSCWAG00000000190)	TXNL4B (ENSCWAG00000000219)	ENSCWAG00000000243	ENSCWAG00000000277	DHODH (ENSCWAG00000000325)	IST1 (ENSCWAG00000000356)	ZNF821 (ENSCWAG00000000420)	AP1G1 (ENSCWAG00000000539)	PHLPP2 (ENSCWAG00000000633)	ENSCWAG00000000821	TAT (ENSCWAG00000000860)	CHST4 (ENSCWAG00000000882)	ZNF23 (ENSCWAG00000000895)	TLE7 (ENSCWAG00000000912) ##22	CALB2 (ENSCWAG00000000947)	CMTR2 (ENSCWAG00000000967)	HYDIN (ENSCWAG00000001015)	ENSCWAG00000001295	ENSCWAG00000001320	ENSCWAG00000001348	MTSS2 (ENSCWAG00000001389)	IL34 (ENSCWAG00000001437)	SF3B3 (ENSCWAG00000001465)	COG4 (ENSCWAG00000001524)	FCSK (ENSCWAG00000001570)	ST3GAL2 (ENSCWAG00000001610)	DDX19B (ENSCWAG00000001659)	ENSCWAG00000001756	AARS1 (ENSCWAG00000001785)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT01100000263669
Camelidae	ANCESTRAL SPECIES	9	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01100000264053	ENSGT00940000157335
Arabian camel	MODERN SPECIES	35	DHX38 (ENSCDRG00005007019)	TXNL4B (ENSCDRG00005007144)	ENSCDRG00005007181	ENSCDRG00005007212	DHODH (ENSCDRG00005007318)	PKD1L3 (ENSCDRG00005007368)	IST1 (ENSCDRG00005007761)	ZNF821 (ENSCDRG00005007845)	ATXN1L (ENSCDRG00005007961)	AP1G1 (ENSCDRG00005008004)	PHLPP2 (ENSCDRG00005008245)	ENSCDRG00005008519	TAT (ENSCDRG00005008591)	ENSCDRG00005008688	ZNF23 (ENSCDRG00005008865)	TLE7 (ENSCDRG00005008960) ##22	CALB2 (ENSCDRG00005009154)	HYDIN (ENSCDRG00005009322)	ENSCDRG00005009789	ENSCDRG00005009859	ENSCDRG00005010004	ENSCDRG00005010046	MTSS2 (ENSCDRG00005010108)	IL34 (ENSCDRG00005010189)	SF3B3 (ENSCDRG00005010317)	COG4 (ENSCDRG00005010542)	FCSK (ENSCDRG00005010961)	ST3GAL2 (ENSCDRG00005011121)	DDX19A (ENSCDRG00005011214)	ENSCDRG00005011628	ENSCDRG00005011679
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.b	ENSGT01080000257453	ENSGT00940000154417.a.a	ENSGT01100000263669	ENSGT00940000157335
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00940000169858	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453.n	ENSGT00940000154417.a.a	ENSGT01080000257453.m	ENSGT00940000154417.a.b
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00940000169858	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453.n.b	ENSGT00940000154417.a.a	ENSGT01080000257453.m	ENSGT00940000154417.a.b
Odontoceti_a	ANCESTRAL SPECIES	7	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00940000169858	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453.n.b	ENSGT00940000154417.a.a	ENSGT01080000257453.m	ENSGT00940000154417.a.b
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00990000211293.b	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00940000169858	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453.n.b	ENSGT00940000154417.a.a	ENSGT01080000257453.m	ENSGT00940000154417.a.b
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00990000211293.b	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00390000008294.e.a	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453.n.b	ENSGT00940000154417.a.a	ENSGT01080000257453.m	ENSGT00940000154417.a.b	ENSGT00940000157335
Narwhal	MODERN SPECIES	296	TXNL4B (ENSMMNG00015003237)	ENSMMNG00015003228	ENSMMNG00015003210	DHODH (ENSMMNG00015003182)	IST1 (ENSMMNG00015003149)	ZNF821 (ENSMMNG00015003100)	ATXN1L (ENSMMNG00015003070)	AP1G1 (ENSMMNG00015003014)	PHLPP2 (ENSMMNG00015002944)	ENSMMNG00015002892	TAT (ENSMMNG00015002871)	CHST4 (ENSMMNG00015002860)	ZNF19 (ENSMMNG00015002839)	ENSMMNG00015002831	ZNF23 (ENSMMNG00015002816)	TLE7 (ENSMMNG00015002801) ##22	CALB2 (ENSMMNG00015002778)	ENSMMNG00015002761	HYDIN (ENSMMNG00015002720)	VAC14 (ENSMMNG00015002646)	MTSS2 (ENSMMNG00015002582)	IL34 (ENSMMNG00015002547)	SF3B3 (ENSMMNG00015002474)	COG4 (ENSMMNG00015002417)	FCSK (ENSMMNG00015002367)	ST3GAL2 (ENSMMNG00015002339)	ENSMMNG00015002313	DDX19A (ENSMMNG00015002246)	ENSMMNG00015002210	DDX19B (ENSMMNG00015002151)	AARS1 (ENSMMNG00015002085)
Beluga whale	MODERN SPECIES	12	PMFBP1 (ENSDLEG00000001763)	DHX38 (ENSDLEG00000001662)	TXNL4B (ENSDLEG00000001623)	ENSDLEG00000001598	DHODH (ENSDLEG00000001578)	IST1 (ENSDLEG00000001546)	ZNF821 (ENSDLEG00000001523)	ATXN1L (ENSDLEG00000001518)	AP1G1 (ENSDLEG00000001483)	PHLPP2 (ENSDLEG00000001453)	TAT (ENSDLEG00000001430)	CHST4 (ENSDLEG00000001425)	ZNF19 (ENSDLEG00000001410)	ENSDLEG00000001403	ZNF23 (ENSDLEG00000001387)	ENSDLEG00000001360 ##22	CALB2 (ENSDLEG00000001346)	ENSDLEG00000001329	HYDIN (ENSDLEG00000000925)	VAC14 (ENSDLEG00000000721)	MTSS1L (ENSDLEG00000000682)	IL34 (ENSDLEG00000000665)	SF3B3 (ENSDLEG00000000586)	COG4 (ENSDLEG00000000507)	FCSK (ENSDLEG00000000262)	ST3GAL2 (ENSDLEG00000003051)	ENSDLEG00000003038	DDX19B (ENSDLEG00000003006)	AARS (ENSDLEG00000002971)	EXOSC6 (ENSDLEG00000002955)	ENSDLEG00000002902
Sperm whale	MODERN SPECIES	574																TLE7 (ENSPCTG00005019014) ##22
Blue whale	MODERN SPECIES	10	TXNL4B (ENSBMSG00010015705)	ENSBMSG00010015741	DHODH (ENSBMSG00010015809)	IST1 (ENSBMSG00010015861)	ENSBMSG00010015908	ATXN1L (ENSBMSG00010015965)	AP1G1 (ENSBMSG00010015990)	PHLPP2 (ENSBMSG00010016096)	ENSBMSG00010016402	TAT (ENSBMSG00010016483)	ENSBMSG00010016618	CHST4 (ENSBMSG00010016628)	ENSBMSG00010016647	ENSBMSG00010016728	ZNF23 (ENSBMSG00010016757)	TLE7 (ENSBMSG00010016787) ##22	CALB2 (ENSBMSG00010016841)	CMTR2 (ENSBMSG00010016953)	ENSBMSG00010016968	ENSBMSG00010017034	VAC14 (ENSBMSG00010017057)	MTSS2 (ENSBMSG00010017173)	IL34 (ENSBMSG00010017294)	SF3B3 (ENSBMSG00010017379)	COG4 (ENSBMSG00010017464)	FCSK (ENSBMSG00010017597)	ST3GAL2 (ENSBMSG00010017806)	DDX19B (ENSBMSG00010017891)	ENSBMSG00010018149	ENSBMSG00010018210	AARS1 (ENSBMSG00010018248)
Pecora	ANCESTRAL SPECIES	4	ENSGT00390000010779.a.b.b.f	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021	ENSGT00940000153725.a.b.a
Percora_a	ANCESTRAL SPECIES	4	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021	ENSGT00940000153725.a.b.a
Bovidae	ANCESTRAL SPECIES	4	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00940000157868.c	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021
Caprinae	ANCESTRAL SPECIES	4	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00940000157868.c	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021
Rambouillet Sheep	MODERN SPECIES	5	PMFBP1 (ENSOARG00020011591)	TXNL4B (ENSOARG00020011869)	ENSOARG00020011920	DHODH (ENSOARG00020012133)	PKD1L3 (ENSOARG00020012292)	IST1 (ENSOARG00020013906)	ZNF821 (ENSOARG00020013988)	ATXN1L (ENSOARG00020014127)	AP1G1 (ENSOARG00020014154)	PHLPP2 (ENSOARG00020014444)	ENSOARG00020014620	TAT (ENSOARG00020014764)	CHST4 (ENSOARG00020014903)	ZNF19 (ENSOARG00020014924)	ZNF23 (ENSOARG00020015007)	TLE7 (ENSOARG00020015063) ##22	CALB2 (ENSOARG00020015182)	CMTR2 (ENSOARG00020015255)	ENSOARG00020015294	POP4 (ENSOARG00020015812)	PLEKHF1 (ENSOARG00020015872)	C19orf12 (ENSOARG00020015895)	CCNE1 (ENSOARG00020016006)	URI1 (ENSOARG00020016490)	ZNF536 (ENSOARG00020016711)	TSHZ3 (ENSOARG00020016853)	ENSOARG00020016916	ZNF507 (ENSOARG00020016947)	DPY19L3 (ENSOARG00020017008)	PDCD5 (ENSOARG00020017391)	ANKRD27 (ENSOARG00020017656)
Goat	MODERN SPECIES	9	TXNL4B (ENSCHIG00000001849)	ENSCHIG00000026069	DHODH (ENSCHIG00000000497)	PKD1L3 (ENSCHIG00000022103)	IST1 (ENSCHIG00000005424)	ZNF821 (ENSCHIG00000018709)	ATXN1L (ENSCHIG00000011785)	ENSCHIG00000018479	AP1G1 (ENSCHIG00000007110)	PHLPP2 (ENSCHIG00000021763)	ENSCHIG00000025747	TAT (ENSCHIG00000018390)	CHST4 (ENSCHIG00000007788)	ZNF19 (ENSCHIG00000015453)	ENSCHIG00000016867	TLE7 (ENSCHIG00000016108) ##22	CALB2 (ENSCHIG00000019148)	CMTR2 (ENSCHIG00000008526)	ENSCHIG00000013255	HYDIN (ENSCHIG00000026411)	POP4 (ENSCHIG00000016743)	PLEKHF1 (ENSCHIG00000005768)	C19orf12 (ENSCHIG00000023412)	CCNE1 (ENSCHIG00000024742)	URI1 (ENSCHIG00000011466)	ZNF536 (ENSCHIG00000015719)	TSHZ3 (ENSCHIG00000015004)	ENSCHIG00000020296	ZNF507 (ENSCHIG00000026183)	DPY19L3 (ENSCHIG00000021524)	PDCD5 (ENSCHIG00000006484)
Bovinae	ANCESTRAL SPECIES	3	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000183198.c.a.b.a.a	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00940000157868.c	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021
Bos	ANCESTRAL SPECIES	4	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000183198.c.a.b.a.a	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00940000157868.c	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021
Bos_a	ANCESTRAL SPECIES	1	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021	ENSGT00940000153725.a.b.a
Domestic yak	MODERN SPECIES	12	DHODH (ENSBGRG00000020593)	PKD1L3 (ENSBGRG00000020235)	IST1 (ENSBGRG00000020084)	ZNF821 (ENSBGRG00000019921)	ATXN1L (ENSBGRG00000019875)	ENSBGRG00000019855	AP1G1 (ENSBGRG00000019571)	PHLPP2 (ENSBGRG00000019231)	ENSBGRG00000019121	ENSBGRG00000019102	TAT (ENSBGRG00000019057)	CHST4 (ENSBGRG00000019045)	ENSBGRG00000019020	ZNF19 (ENSBGRG00000018945)	ZNF23 (ENSBGRG00000018887)	TLE7 (ENSBGRG00000018847) ##22	CALB2 (ENSBGRG00000018597)	CMTR2 (ENSBGRG00000018577)	ENSBGRG00000018230	POP4 (ENSBGRG00000018144)	PLEKHF1 (ENSBGRG00000018110)	C19orf12 (ENSBGRG00000018064)	CCNE1 (ENSBGRG00000017848)	URI1 (ENSBGRG00000017617)	ZNF536 (ENSBGRG00000017429)	ENSBGRG00000017388	ENSBGRG00000017301	ZNF507 (ENSBGRG00000017072)	DPY19L3 (ENSBGRG00000016779)	PDCD5 (ENSBGRG00000016600)	ANKRD27 (ENSBGRG00000015781)
Wild yak	MODERN SPECIES	1105								AP1G1 (ENSBMUG00000006145)	ENSBMUG00000006155	PHLPP2 (ENSBMUG00000006177)	ENSBMUG00000006191	TAT (ENSBMUG00000006211)	CHST4 (ENSBMUG00000006220)	ZNF19 (ENSBMUG00000006233)	ZNF23 (ENSBMUG00000006245)	TLE7 (ENSBMUG00000006254) ##22	CALB2 (ENSBMUG00000006279)	CMTR2 (ENSBMUG00000006290)	ENSBMUG00000006335	POP4 (ENSBMUG00000006454)	PLEKHF1 (ENSBMUG00000006460)	C19orf12 (ENSBMUG00000006484)	CCNE1 (ENSBMUG00000006541)	URI1 (ENSBMUG00000006595)
Bos_b	ANCESTRAL SPECIES		ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000183198.c.a.b.a.a	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000010067	ENSGT00940000160728	ENSGT00390000009077	ENSGT00940000156256	ENSGT00390000002362	ENSGT00940000156397.a.a	ENSGT00950000183051.b.a	ENSGT00940000157868.c	ENSGT00490000043434	ENSGT00530000063023.A.a	ENSGT00390000011085	ENSGT00940000157021
Hybrid Bos Indicus	MODERN SPECIES	9	TXNL4B (ENSBIXG00005026104)	ENSBIXG00005026212	DHODH (ENSBIXG00005026286)	PKD1L3 (ENSBIXG00005002543)	IST1 (ENSBIXG00005026489)	ZNF821 (ENSBIXG00005007202)	ATXN1L (ENSBIXG00005026573)	ENSBIXG00005026596	AP1G1 (ENSBIXG00005026699)	PHLPP2 (ENSBIXG00005026802)	ENSBIXG00005026870	TAT (ENSBIXG00005026937)	CHST4 (ENSBIXG00005026947)	ZNF19 (ENSBIXG00005026993)	ZNF23 (ENSBIXG00005004631)	TLE7 (ENSBIXG00005027053) ##22	CALB2 (ENSBIXG00005027092)	CMTR2 (ENSBIXG00005027123)	ENSBIXG00005004688	ENSBIXG00005027467	POP4 (ENSBIXG00005027514)	PLEKHF1 (ENSBIXG00005027531)	C19orf12 (ENSBIXG00005027595)	CCNE1 (ENSBIXG00005027655)	URI1 (ENSBIXG00005027711)	ZNF536 (ENSBIXG00005004770)	TSHZ3 (ENSBIXG00005027810)	ENSBIXG00005027900	ZNF507 (ENSBIXG00005027929)	DPY19L3 (ENSBIXG00005028026)	ENSBIXG00005004831
American bison	MODERN SPECIES	3211	TXNL4B (ENSBBBG00000017119)	ENSBBBG00000008299	DHODH (ENSBBBG00000017286)	PKD1L3 (ENSBBBG00000004292)	IST1 (ENSBBBG00000017361)	ENSBBBG00000008451	ATXN1L (ENSBBBG00000017381)	ENSBBBG00000017395	AP1G1 (ENSBBBG00000017532)	PHLPP2 (ENSBBBG00000017628)	ENSBBBG00000017644	TAT (ENSBBBG00000017662)	CHST4 (ENSBBBG00000017670)	ZNF19 (ENSBBBG00000017689)	ZNF23 (ENSBBBG00000017702)	TLE7 (ENSBBBG00000017714) ##22	CALB2 (ENSBBBG00000017758)	CMTR2 (ENSBBBG00000004380)	ENSBBBG00000017818	POP4 (ENSBBBG00000017837)	PLEKHF1 (ENSBBBG00000008008)	C19orf12 (ENSBBBG00000017853)	CCNE1 (ENSBBBG00000017896)	URI1 (ENSBBBG00000017939)	ZNF536 (ENSBBBG00000017947)	TSHZ3 (ENSBBBG00000004412)
Siberian musk deer	MODERN SPECIES	125	PMFBP1 (ENSMMSG00000003187)	DHX38 (ENSMMSG00000003128)	TXNL4B (ENSMMSG00000003109)	ENSMMSG00000003081	DHODH (ENSMMSG00000003038)	IST1 (ENSMMSG00000002908)	ZNF821 (ENSMMSG00000002805)	ATXN1L (ENSMMSG00000002787)	AP1G1 (ENSMMSG00000002693)	PHLPP2 (ENSMMSG00000002614)	ENSMMSG00000002572	TAT (ENSMMSG00000002530)	CHST4 (ENSMMSG00000002516)	ZNF19 (ENSMMSG00000002502)	ZNF23 (ENSMMSG00000002487)	TLE7 (ENSMMSG00000002450) ##22	CALB2 (ENSMMSG00000002376)	CMTR2 (ENSMMSG00000002352)	ENSMMSG00000002328	HYDIN (ENSMMSG00000002047)	POP4 (ENSMMSG00000001970)	C19orf12 (ENSMMSG00000001952)	CCNE1 (ENSMMSG00000001931)	URI1 (ENSMMSG00000001916)	ZNF536 (ENSMMSG00000001908)	TSHZ3 (ENSMMSG00000001900)	ENSMMSG00000001891	ENSMMSG00000001861	ZNF507 (ENSMMSG00000001851)	DPY19L3 (ENSMMSG00000001821)	PDCD5 (ENSMMSG00000001787)
Yarkand deer	MODERN SPECIES	27	TXNL4B (ENSCHYG00000022570)	ENSCHYG00000022592	ENSCHYG00000022629	ENSCHYG00000022830	DHODH (ENSCHYG00000022843)	PKD1L3 (ENSCHYG00000022922)	IST1 (ENSCHYG00000023422)	ZNF821 (ENSCHYG00000023487)	ATXN1L (ENSCHYG00000023611)	AP1G1 (ENSCHYG00000023628)	PHLPP2 (ENSCHYG00000023784)	ENSCHYG00000023960	TAT (ENSCHYG00000024008)	ZNF19 (ENSCHYG00000024051)	ZNF23 (ENSCHYG00000024101)	TLE7 (ENSCHYG00000005818) ##22	CALB2 (ENSCHYG00000005859)	CMTR2 (ENSCHYG00000005918)	ENSCHYG00000005945	ENSCHYG00000006005	ENSCHYG00000006027	PLEKHF1 (ENSCHYG00000006065)	C19orf12 (ENSCHYG00000006082)	CCNE1 (ENSCHYG00000006119)	URI1 (ENSCHYG00000006211)	ENSCHYG00000006259	ZNF536 (ENSCHYG00000006308)	TSHZ3 (ENSCHYG00000006419)	ZNF507 (ENSCHYG00000006472)	DPY19L3 (ENSCHYG00000006514)	PDCD5 (ENSCHYG00000006657)
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT01100000263669
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01100000263669	ENSGT00940000157335	ENSGT00940000153348.A
Chiroptera	ANCESTRAL SPECIES	21	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00900000141128
Microchiroptera	ANCESTRAL SPECIES	12	ENSGT00940000156898	ENSGT00390000010779.a.b.b.f	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A	ENSGT00900000141128
Greater horseshoe bat	MODERN SPECIES	6	TXNL4B (ENSRFEG00010007968)	ENSRFEG00010008015	DHODH (ENSRFEG00010008099)	PKD1L3 (ENSRFEG00010008284)	IST1 (ENSRFEG00010008613)	ENSRFEG00010008765	ZNF821 (ENSRFEG00010008793)	ATXN1L (ENSRFEG00010008894)	AP1G1 (ENSRFEG00010008938)	PHLPP2 (ENSRFEG00010009160)	ENSRFEG00010009268	TAT (ENSRFEG00010009342)	CHST4 (ENSRFEG00010009513)	ZNF19 (ENSRFEG00010009535)	ZNF23 (ENSRFEG00010009684)	TLE7 (ENSRFEG00010009764) ##22	CALB2 (ENSRFEG00010009864)	CMTR2 (ENSRFEG00010009910)	HYDIN (ENSRFEG00010009988)	ENSRFEG00010011532	VAC14 (ENSRFEG00010011570)	MTSS2 (ENSRFEG00010011673)	IL34 (ENSRFEG00010011770)	SF3B3 (ENSRFEG00010011817)	COG4 (ENSRFEG00010011952)	FCSK (ENSRFEG00010012061)	ST3GAL2 (ENSRFEG00010012285)	DDX19A (ENSRFEG00010012387)	DDX19B (ENSRFEG00010012475)	AARS1 (ENSRFEG00010012764)	EXOSC6 (ENSRFEG00010012832)
Microbat	MODERN SPECIES	1025	DHX38 (ENSMLUG00000013866)	TXNL4B (ENSMLUG00000013863)	ENSMLUG00000026379	DHODH (ENSMLUG00000013861)	IST1 (ENSMLUG00000013833)	ZNF821 (ENSMLUG00000013825)	ATXN1L (ENSMLUG00000026137)	ENSMLUG00000028055	AP1G1 (ENSMLUG00000008732)	PHLPP2 (ENSMLUG00000008702)	ENSMLUG00000008690	TAT (ENSMLUG00000008659)	CHST4 (ENSMLUG00000008656)	ENSMLUG00000030681	ZNF23 (ENSMLUG00000003725)	TLE7 (ENSMLUG00000027365) ##22	CALB2 (ENSMLUG00000008627)	CMTR2 (ENSMLUG00000000607)	HYDIN (ENSMLUG00000016168)	VAC14 (ENSMLUG00000016155)	ENSMLUG00000029950	SF3B3 (ENSMLUG00000014607)	COG4 (ENSMLUG00000007539)	FCSK (ENSMLUG00000007490)	ST3GAL2 (ENSMLUG00000000116)	ENSMLUG00000007474	DDX19B (ENSMLUG00000007447)	AARS1 (ENSMLUG00000007431)	EXOSC6 (ENSMLUG00000023828)	ENSMLUG00000007406	ENSMLUG00000009253
Equus	ANCESTRAL SPECIES	20	ENSGT00390000010779.a.b.b.e.b	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.e.a.a	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT00940000154417.a.b	ENSGT01100000263669	ENSGT00940000157335	ENSGT00940000153348.A
Donkey	MODERN SPECIES	20	ENSEASG00005013259	ENSEASG00005038052	IST1 (ENSEASG00005024334)	ZNF821 (ENSEASG00005013267)	ATXN1L (ENSEASG00005038235)	ENSEASG00005028421	AP1G1 (ENSEASG00005013276)	PHLPP2 (ENSEASG00005013281)	ENSEASG00005025436	TAT (ENSEASG00005013288)	ENSEASG00005028675	CHST4 (ENSEASG00005029334)	ENSEASG00005038445	ZNF23 (ENSEASG00005013306)	ENSEASG00005013308	TLE7 (ENSEASG00005013310) ##22	CALB2 (ENSEASG00005013313)	CMTR2 (ENSEASG00005013317)	VAC14 (ENSEASG00005013366)	MTSS2 (ENSEASG00005013371)	IL34 (ENSEASG00005013375)	SF3B3 (ENSEASG00005013376)	COG4 (ENSEASG00005013387)	FCSK (ENSEASG00005013391)	ST3GAL2 (ENSEASG00005013401)	ENSEASG00005013405	ENSEASG00005013407	AARS1 (ENSEASG00005013408)	DDX19B (ENSEASG00005037663)	ENSEASG00005027260	ENSEASG00005013412
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335
Felidae	ANCESTRAL SPECIES	7	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Panthera	ANCESTRAL SPECIES	10	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00910000148044	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Panthera_a	ANCESTRAL SPECIES	8	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00910000148044	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT00940000166352	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
leopard	MODERN SPECIES	28	DHX38 (ENSPPRG00000008930)	ENSPPRG00000009616	ENSPPRG00000010415	DHODH (ENSPPRG00000011780)	IST1 (ENSPPRG00000022479)	ZNF821 (ENSPPRG00000023201)	ATXN1L (ENSPPRG00000020390)	ENSPPRG00000022799	AP1G1 (ENSPPRG00000001528)	PHLPP2 (ENSPPRG00000003903)	ENSPPRG00000004378	TAT (ENSPPRG00000004459)	CHST4 (ENSPPRG00000004537)	ZNF19 (ENSPPRG00000006028)	ZNF23 (ENSPPRG00000006925)	TLE7 (ENSPPRG00000007407) ##22	CALB2 (ENSPPRG00000008922)	CMTR2 (ENSPPRG00000020552)	HYDIN (ENSPPRG00000016374)	VAC14 (ENSPPRG00000023649)	MTSS2 (ENSPPRG00000000123)	IL34 (ENSPPRG00000001259)	SF3B3 (ENSPPRG00000001686)	COG4 (ENSPPRG00000003206)	FCSK (ENSPPRG00000007362)	ST3GAL2 (ENSPPRG00000008166)	ENSPPRG00000008883	DDX19A (ENSPPRG00000009999)	ENSPPRG00000010048	DDX19B (ENSPPRG00000012923)	AARS1 (ENSPPRG00000013214)
lion	MODERN SPECIES	15	ENSPLOG00000011164	ENSPLOG00000011195	DHODH (ENSPLOG00000011264)	ENSPLOG00000011412	ZNF821 (ENSPLOG00000011687)	ATXN1L (ENSPLOG00000011759)	AP1G1 (ENSPLOG00000011788)	PHLPP2 (ENSPLOG00000011901)	ENSPLOG00000012020	TAT (ENSPLOG00000012060)	CHST4 (ENSPLOG00000012154)	ENSPLOG00000012188	ZNF19 (ENSPLOG00000012217)	ZNF23 (ENSPLOG00000012301)	ENSPLOG00000012372	TLE7 (ENSPLOG00000012411) ##22	CALB2 (ENSPLOG00000012534)	CMTR2 (ENSPLOG00000012715)	HYDIN (ENSPLOG00000012780)	VAC14 (ENSPLOG00000013688)	MTSS2 (ENSPLOG00000013769)	ENSPLOG00000014106	SF3B3 (ENSPLOG00000014278)	COG4 (ENSPLOG00000014349)	FCSK (ENSPLOG00000014457)	ST3GAL2 (ENSPLOG00000014572)	ENSPLOG00000014627	DDX19B (ENSPLOG00000014792)	ENSPLOG00000014951	AARS1 (ENSPLOG00000014996)	EXOSC6 (ENSPLOG00000015053)
Tiger	MODERN SPECIES	47	PMFBP1 (ENSPTIG00000018078)	DHX38 (ENSPTIG00000017274)	TXNL4B (ENSPTIG00000015845)	ENSPTIG00000013933	DHODH (ENSPTIG00000012963)	IST1 (ENSPTIG00000002906)	ZNF821 (ENSPTIG00000022067)	ATXN1L (ENSPTIG00000002157)	AP1G1 (ENSPTIG00000021370)	PHLPP2 (ENSPTIG00000010512)	ENSPTIG00000009555	TAT (ENSPTIG00000009357)	CHST4 (ENSPTIG00000001748)	ZNF19 (ENSPTIG00000007719)	ZNF23 (ENSPTIG00000006872)	TLE7 (ENSPTIG00000004176) ##22	CALB2 (ENSPTIG00000020486)	CMTR2 (ENSPTIG00000019568)	HYDIN (ENSPTIG00000000797)	VAC14 (ENSPTIG00000018582)	MTSS2 (ENSPTIG00000013869)	IL34 (ENSPTIG00000010087)	SF3B3 (ENSPTIG00000020382)	COG4 (ENSPTIG00000017436)	FCSK (ENSPTIG00000011986)	ST3GAL2 (ENSPTIG00000011620)	ENSPTIG00000010223	DDX19A (ENSPTIG00000008190)	ENSPTIG00000007090	DDX19B (ENSPTIG00000000185)	AARS1 (ENSPTIG00000021477)
Cat	MODERN SPECIES	246	PMFBP1 (ENSFCAG00000005834)	DHX38 (ENSFCAG00000005831)	ENSFCAG00000005830	HP (ENSFCAG00000005828)	DHODH (ENSFCAG00000026024)	IST1 (ENSFCAG00000023201)	ZNF821 (ENSFCAG00000011073)	ATXN1L (ENSFCAG00000023773)	AP1G1 (ENSFCAG00000028065)	PHLPP2 (ENSFCAG00000011901)	ENSFCAG00000044722	TAT (ENSFCAG00000004379)	CHST4 (ENSFCAG00000001730)	ENSFCAG00000032889	ZNF19 (ENSFCAG00000033576)	TLE7 (ENSFCAG00000025414) ##22	CALB2 (ENSFCAG00000010199)	CMTR2 (ENSFCAG00000030250)	HYDIN (ENSFCAG00000035742)	VAC14 (ENSFCAG00000005383)	MTSS2 (ENSFCAG00000030321)	IL34 (ENSFCAG00000028376)	SF3B3 (ENSFCAG00000009487)	COG4 (ENSFCAG00000009486)	FCSK (ENSFCAG00000009485)	ST3GAL2 (ENSFCAG00000030674)	DDX19B (ENSFCAG00000029489)	ENSFCAG00000039011	ENSFCAG00000038858	AARS1 (ENSFCAG00000009482)	EXOSC6 (ENSFCAG00000046021)
Caniformia	ANCESTRAL SPECIES	1	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335
Caniformia_b	ANCESTRAL SPECIES	2	ENSGT00390000010779.a.b.b.e.a	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000164150	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335
Mustelinae	ANCESTRAL SPECIES	6	ENSGT00390000010779.a.b.b.e.a	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00900000141128	ENSGT00940000159082.b
Ferret	MODERN SPECIES	644															ZNF23 (ENSMPUG00000016028)	TLE7 (ENSMPUG00000016027) ##22	CALB2 (ENSMPUG00000016007)	CMTR2 (ENSMPUG00000019532)
American mink	MODERN SPECIES	2	DHX38 (ENSNVIG00000007353)	TXN4B (ENSNVIG00000007340)	ENSNVIG00000007336	ENSNVIG00000007306	PYRD (ENSNVIG00000007278)	IST1 (ENSNVIG00000007209)	ZNF821 (ENSNVIG00000007122)	ATXN1L (ENSNVIG00000007111)	AP1G1 (ENSNVIG00000006978)	PHLPP2 (ENSNVIG00000006734)	ENSNVIG00000006673	TAT (ENSNVIG00000006598)	CHST4 (ENSNVIG00000006548)	ZNF19 (ENSNVIG00000006468)	ZNF23 (ENSNVIG00000006406)	TLE7 (ENSNVIG00000006337) ##22	CALB2 (ENSNVIG00000006239)	CMTR2 (ENSNVIG00000006204)	HYDIN (ENSNVIG00000005676)	VAC14 (ENSNVIG00000005599)	MTSS2 (ENSNVIG00000005489)	IL34 (ENSNVIG00000005434)	SF3B3 (ENSNVIG00000005374)	COG4 (ENSNVIG00000005307)	FCSK (ENSNVIG00000005261)	SIA4B (ENSNVIG00000005224)	ENSNVIG00000005213	DDX19B (ENSNVIG00000005161)	AARS1 (ENSNVIG00000003819)	ENSNVIG00000003511	PDPR (ENSNVIG00000003485)
Ursidae	ANCESTRAL SPECIES	8	ENSGT00390000010779.a.b.b.e.a	ENSGT00950000185224	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453	ENSGT00940000154417.a.b	ENSGT00940000157335	ENSGT00940000153348.A
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	14	TBXA2R (ENSAMEG00000005733) #7	ENSAMEG00000028252	GIPC3 (ENSAMEG00000005731) #8	ENSAMEG00000030856 #9	MFSD12 (ENSAMEG00000005668) #10	ENSAMEG00000030978 #11	ENSAMEG00000005619 #13	ENSAMEG00000028568	ENSAMEG00000030871	NFIC (ENSAMEG00000005577) #15	ENSAMEG00000005527	NCLN (ENSAMEG00000005496) #17	S1PR4 (ENSAMEG00000005495) #18	GNA15 (ENSAMEG00000005493) #19	GNA11 (ENSAMEG00000005458) #20	ENSAMEG00000029178 ##22	TLE2 (ENSAMEG00000005391) #22	TLE6 (ENSAMEG00000005371) ##22	ENSAMEG00000029425	ZNF556 (ENSAMEG00000005362)	ZNF555 (ENSAMEG00000005361)	ENSAMEG00000005363	ZNF554 (ENSAMEG00000005360)	THOP1 (ENSAMEG00000005314)	SGTA (ENSAMEG00000005257)	SLC39A3 (ENSAMEG00000028287)	DIRAS1 (ENSAMEG00000018705)	GNG7 (ENSAMEG00000005631)	LMNB2 (ENSAMEG00000005548)	TIMM13 (ENSAMEG00000028321)	TMPRSS9 (ENSAMEG00000005520)
Giant Panda	MODERN SPECIES	3	ZFHX3 (ENSAMEG00000002197)	PMFBP1 (ENSAMEG00000002201)	DHX38 (ENSAMEG00000002227)	ENSAMEG00000002285	ENSAMEG00000023458	DHODH (ENSAMEG00000002287)	IST1 (ENSAMEG00000002522)	ZNF821 (ENSAMEG00000002510)	AP1G1 (ENSAMEG00000002445)	PHLPP2 (ENSAMEG00000002396)	ENSAMEG00000002393	TAT (ENSAMEG00000002374)	CHST4 (ENSAMEG00000002372)	ZNF19 (ENSAMEG00000002368)	ZNF23 (ENSAMEG00000002365)	TLE7 (ENSAMEG00000002363) ##22	CALB2 (ENSAMEG00000002338)	HYDIN (ENSAMEG00000002304)	VAC14 (ENSAMEG00000002267)	MTSS2 (ENSAMEG00000002234)	IL34 (ENSAMEG00000002226)	SF3B3 (ENSAMEG00000002187)	COG4 (ENSAMEG00000002121)	FCSK (ENSAMEG00000002060)	ST3GAL2 (ENSAMEG00000002046)	DDX19A (ENSAMEG00000001987)	ENSAMEG00000026029	ENSAMEG00000004879	ENSAMEG00000031350	AARS1 (ENSAMEG00000004815)	ENSAMEG00000004778
Canidae	ANCESTRAL SPECIES	11	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453.h	ENSGT00940000154417.a.b	ENSGT01080000257453.g	ENSGT00940000157335
Canis_lupus	ANCESTRAL SPECIES	5	ENSGT00940000156898	ENSGT00390000010779.a.b.b.e.a	ENSGT00940000159903	ENSGT00500000044924	ENSGT00940000162813	ENSGT00390000007453	ENSGT00940000159421	ENSGT00390000005939.b	ENSGT00950000182838.B.a.a	ENSGT00940000159841	ENSGT00950000183102.A.b.b	ENSGT00940000156704	ENSGT00940000162746	ENSGT00940000163278.f	ENSGT00940000162377	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00950000183108.b.a.a	ENSGT00940000161773	ENSGT00610000086095	ENSGT00390000008385	ENSGT00950000183156.a.b.b.a	ENSGT00390000000932	ENSGT00950000183151.a.a.b	ENSGT00940000154065.a	ENSGT00390000002251	ENSGT00940000156356	ENSGT00940000154417.a.a	ENSGT01080000257453.h	ENSGT00940000154417.a.b	ENSGT01080000257453.g	ENSGT00940000157335
Dog	MODERN SPECIES	33	PMFBP1 (ENSCAFG00845008440)	DHX38 (ENSCAFG00845008252)	TXNL4B (ENSCAFG00845008202)	ENSCAFG00845007968	ENSCAFG00845007063	IST1 (ENSCAFG00845006613)	ZNF821 (ENSCAFG00845006363)	ATXN1L (ENSCAFG00845006317)	AP1G1 (ENSCAFG00845005939)	ENSCAFG00845005682	TAT (ENSCAFG00845005635)	ENSCAFG00845005608	CHST4 (ENSCAFG00845005592)	ZNF19 (ENSCAFG00845005533)	ZNF23 (ENSCAFG00845005511)	TLE7 (ENSCAFG00845005490) ##22	CALB2 (ENSCAFG00845005447)	CMTR2 (ENSCAFG00845005419)	HYDIN (ENSCAFG00845005362)	VAC14 (ENSCAFG00845005319)	MTSS2 (ENSCAFG00845005284)	IL34 (ENSCAFG00845005263)	SF3B3 (ENSCAFG00845005230)	COG4 (ENSCAFG00845005204)	FCSK (ENSCAFG00845005118)	ST3GAL2 (ENSCAFG00845005084)	ENSCAFG00845005070	DDX19B (ENSCAFG00845005025)	AARS1 (ENSCAFG00845004979)	ENSCAFG00845004932	CLEC18C (ENSCAFG00845004916)
Red fox	DUPLICATION
Red fox	MODERN SPECIES	163	GIPC3 (ENSVVUG00000003327) #8	HMG20B (ENSVVUG00000003300) #9	MFSD12 (ENSVVUG00000003293) #10	CUNH19orf71 (ENSVVUG00000003289) #11	FZR1 (ENSVVUG00000003282) #12	DOHH (ENSVVUG00000003275) #13	SMIM24 (ENSVVUG00000003269) #14	NFIC (ENSVVUG00000003261) #15	ENSVVUG00000003252 #16	ENSVVUG00000003246	ENSVVUG00000003242 #16	NCLN (ENSVVUG00000002992) #17	S1PR4 (ENSVVUG00000002968) #18	GNA15 (ENSVVUG00000002952) #19	GNA11 (ENSVVUG00000002939) #20	ENSVVUG00000002912 ##22	TLE2 (ENSVVUG00000002888) #22	ENSVVUG00000002863 ##22	ENSVVUG00000002857	ENSVVUG00000002849	ZNF556 (ENSVVUG00000002841)	ZNF555 (ENSVVUG00000002836)	ZNF554 (ENSVVUG00000002833)	THOP1 (ENSVVUG00000002818)	SGTA (ENSVVUG00000002809)	SLC39A3 (ENSVVUG00000002808)	DIRAS1 (ENSVVUG00000002802)	GNG7 (ENSVVUG00000002792)	GADD45B (ENSVVUG00000002785)	LMNB2 (ENSVVUG00000002769)	TIMM13 (ENSVVUG00000002756)
Red fox	MODERN SPECIES	86	TXNL4B (ENSVVUG00000017485)	ENSVVUG00000017489	ENSVVUG00000017493	DHODH (ENSVVUG00000017500)	PKD1L3 (ENSVVUG00000017535)	IST1 (ENSVVUG00000017619)	ZNF821 (ENSVVUG00000017628)	ATXN1L (ENSVVUG00000017634)	ENSVVUG00000017637	ENSVVUG00000017661	TAT (ENSVVUG00000017663)	ENSVVUG00000017669	CHST4 (ENSVVUG00000017673)	ZNF19 (ENSVVUG00000017681)	ZNF23 (ENSVVUG00000017684)	TLE7 (ENSVVUG00000017686) ##22	CALB2 (ENSVVUG00000017693)	CMTR2 (ENSVVUG00000017698)	HYDIN (ENSVVUG00000017714)	VAC14 (ENSVVUG00000017896)	MTSS2 (ENSVVUG00000017909)	IL34 (ENSVVUG00000017916)	SF3B3 (ENSVVUG00000017922)	COG4 (ENSVVUG00000017945)	FUK (ENSVVUG00000017963)	ST3GAL2 (ENSVVUG00000018006)	DDX19B (ENSVVUG00000018012)	ENSVVUG00000018034	AARS (ENSVVUG00000018036)	ENSVVUG00000018042
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Euteleostomi	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Sarcopterygii	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Tetrapoda	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Amniota	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Mammalia	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Theria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Eutheria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Boreoeutheria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Euarchontoglires	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Primates	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Haplorrhini	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Tarsier	MODERN SPECIES	1849																ENSTSYG00000030540 ##22
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Bushbaby	MODERN SPECIES	141	PRL (ENSOGAG00000008372)	HDGFL1 (ENSOGAG00000008374)	NRSN1 (ENSOGAG00000025470)	DCDC2 (ENSOGAG00000015852)	MRS2 (ENSOGAG00000015862)	GPLD1 (ENSOGAG00000015865)	ALDH5A1 (ENSOGAG00000010743)	KIAA0319 (ENSOGAG00000010747)	TDP2 (ENSOGAG00000025303)	ACOT13 (ENSOGAG00000004977)	C6orf62 (ENSOGAG00000027378)	ENSOGAG00000004982	ARMH2 (ENSOGAG00000031563)	RIPOR2 (ENSOGAG00000004987)	ENSOGAG00000001719	ENSOGAG00000034652 ##22	CARMIL1 (ENSOGAG00000005535)
Laurasiatheria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Laurasiatheria_a	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Artiodactyla	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Artiodactyla_a	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Artiodactyla_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Pecora	ANCESTRAL SPECIES	6	ENSGT00490000043421	ENSGT00940000156502	ENSGT00940000159132.a	ENSGT00940000158072	ENSGT00940000158704	ENSGT00940000156106	ENSGT00660000095541.a.b	ENSGT00940000161597	ENSGT00950000183148.a	ENSGT00940000154071.A	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT00390000005163	ENSGT00940000157901	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT00390000000628.m.b	ENSGT01050000244902.b.c.b	ENSGT00530000063760.a	ENSGT00530000063561	ENSGT00940000158086	ENSGT00940000157725	ENSGT00860000136093	ENSGT00390000008748.b	ENSGT00390000005300	ENSGT00510000048252	ENSGT00940000155628	ENSGT00950000186329	ENSGT00940000158007	ENSGT00390000001280.a	ENSGT00940000155889
Percora_a	ANCESTRAL SPECIES	8	ENSGT00490000043421	ENSGT00940000156502	ENSGT00940000159132.a	ENSGT00940000158072	ENSGT00940000158704	ENSGT00940000156106	ENSGT00660000095541.a.b	ENSGT00940000161597	ENSGT00950000183148.a	ENSGT00940000154071.A	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT00390000005163	ENSGT00940000157901	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT00390000000628.m.b	ENSGT01050000244902.b.c.b	ENSGT00530000063760.a	ENSGT00530000063561	ENSGT00940000158086	ENSGT00940000157725	ENSGT00860000136093	ENSGT00390000008748.b	ENSGT00390000005300	ENSGT00510000048252	ENSGT00940000155628	ENSGT00950000186329	ENSGT00940000158007	ENSGT00390000001280.a	ENSGT00940000155889
Bovidae	ANCESTRAL SPECIES	7	ENSGT00490000043421	ENSGT00940000156502	ENSGT00940000159132.a	ENSGT00940000158072	ENSGT00940000158704	ENSGT00940000156106	ENSGT00660000095541.a.b	ENSGT00940000161597	ENSGT00950000183148.a	ENSGT00940000154071.A	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT00390000005163	ENSGT00940000157901	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT00390000000628.m.b	ENSGT01050000244902.b.c.b	ENSGT00530000063760.a	ENSGT00530000063561	ENSGT00940000158086	ENSGT00940000157725	ENSGT00860000136093	ENSGT00390000008748.b	ENSGT00390000005300	ENSGT00510000048252	ENSGT00390000015789.c.b	ENSGT00940000155628	ENSGT00950000186329	ENSGT00940000158007	ENSGT00390000001280.a
Caprinae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Rambouillet Sheep	MODERN SPECIES	23	L2HGDH (ENSOARG00020022135)	DMAC2L (ENSOARG00020022235)	CDKL1 (ENSOARG00020022279)	MAP4K5 (ENSOARG00020022416)	TRIM9 (ENSOARG00020022559)	PYGL (ENSOARG00020022835)	ABHD12B (ENSOARG00020023110)	NIN (ENSOARG00020023168)	SAV1 (ENSOARG00020023231)	ATL1 (ENSOARG00020023261)	ENSOARG00020023429	FRMD6 (ENSOARG00020023456)	GNG2 (ENSOARG00020023501)	RTRAF (ENSOARG00020023533)	NID2 (ENSOARG00020023556)	ENSOARG00020023613 ##22	ENSOARG00020023633	ENSOARG00020023643	PTGDR (ENSOARG00020023654)	PLEKHO2 (ENSOARG00020023668)	PIF1 (ENSOARG00020023726)	RBPMS2 (ENSOARG00020023782)	OAZ2 (ENSOARG00020023813)	ZNF609 (ENSOARG00020023856)	TRIP4 (ENSOARG00020023887)	PCLAF (ENSOARG00020023913)	CSNK1G1 (ENSOARG00020024000)	PPIB (ENSOARG00020024684)	SNX22 (ENSOARG00020007311)	SNX1 (ENSOARG00020007347)	ENSOARG00020007473
Yarkand deer	MODERN SPECIES	32	CACTIN (ENSCHYG00000003483)	TBXA2R (ENSCHYG00000003508) #7	GIPC3 (ENSCHYG00000003521) #8	HMG20B (ENSCHYG00000003538) #9	MFSD12 (ENSCHYG00000003571) #10	ENSCHYG00000003615 #11	FZR1 (ENSCHYG00000003667) #12	ENSCHYG00000003765 #13	SMIM24 (ENSCHYG00000003795) #14	NFIC (ENSCHYG00000003885) #15	CELF5 (ENSCHYG00000004001) #16	NCLN (ENSCHYG00000004043) #17	S1PR4 (ENSCHYG00000004078) #18	GNA15 (ENSCHYG00000004083) #19	GNA11 (ENSCHYG00000004093) #20	ENSCHYG00000004111 ##22	ENSCHYG00000004147 #22	TLE6 (ENSCHYG00000004189) ##22	ENSCHYG00000004218 #24	ZNF555 (ENSCHYG00000004235)	ZNF554 (ENSCHYG00000004250)	THOP1 (ENSCHYG00000004286)	SGTA (ENSCHYG00000004319)	SLC39A3 (ENSCHYG00000004339)	DIRAS1 (ENSCHYG00000004359)	GNG7 (ENSCHYG00000004365)	GADD45B (ENSCHYG00000004382)	SPPL2B (ENSCHYG00000004423)	LMNB2 (ENSCHYG00000004498)	TIMM13 (ENSCHYG00000000344)	TMPRSS9 (ENSCHYG00000000368)
Cetacea	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Odontoceti	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Odontoceti_a	ANCESTRAL SPECIES	2	ENSGT00940000156502	ENSGT00940000159132.a	ENSGT00940000158072	ENSGT00940000158704	ENSGT00940000156106	ENSGT00660000095541.a.b	ENSGT00940000161597.a	ENSGT00950000183148.a	ENSGT00940000154071.A	ENSGT01010000228734	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT00390000005163	ENSGT00940000157901	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01050000244902.b.c.b	ENSGT01050000244902.b.c.a	ENSGT00390000006080	ENSGT00940000154563.m.a	ENSGT00940000153986.a	ENSGT00390000007753.b	ENSGT01020000230346.A	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00390000003197.i.a.u.b	ENSGT00940000159502	ENSGT00390000004717	ENSGT00950000182834.A.a.a
Odontoceti_b	ANCESTRAL SPECIES	2	ENSGT00940000156502	ENSGT00940000159132.a	ENSGT00940000158072	ENSGT00940000158704	ENSGT00940000156106	ENSGT00660000095541.a.b	ENSGT00940000161597.a	ENSGT00950000183148.a	ENSGT00940000154071.A	ENSGT01010000228734	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT00390000005163	ENSGT00940000157901	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01050000244902.b.c.b	ENSGT01050000244902.b.c.a	ENSGT00390000006080	ENSGT00940000154563.m.a	ENSGT00940000153986.a	ENSGT00390000007753.b	ENSGT01020000230346.A	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00390000003197.i.a.u.b	ENSGT00910000144184.r.b	ENSGT00940000159502	ENSGT00390000004717
Monodontidae	ANCESTRAL SPECIES	11	ENSGT00940000159132.a	ENSGT00940000158072	ENSGT00940000158704	ENSGT00940000156106	ENSGT00660000095541.a.b	ENSGT00940000161597.a	ENSGT00950000183148.a	ENSGT00940000154071.A	ENSGT01010000228734	ENSGT00940000155959	ENSGT00940000155517	ENSGT01100000263497.C	ENSGT01010000229621	ENSGT00390000005163	ENSGT00940000157901	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01050000244902.b.c.b	ENSGT01050000244902.b.c.a	ENSGT00390000006080	ENSGT00940000154563.m.a	ENSGT00940000153986.a	ENSGT00390000007753.b	ENSGT01020000230346.A	ENSGT00940000154859	ENSGT00390000008666	ENSGT00390000013444.a.a	ENSGT00940000156065	ENSGT00390000003197.i.a.u.b	ENSGT00910000144184.r.b	ENSGT00940000159502	ENSGT00390000004717
Beluga whale	MODERN SPECIES	44	MAP4K5 (ENSDLEG00000009907)	ATL1 (ENSDLEG00000009841)	SAV1 (ENSDLEG00000009823)	NIN (ENSDLEG00000007666)	ABHD12B (ENSDLEG00000007653)	PYGL (ENSDLEG00000007635)	TRIM9 (ENSDLEG00000007605)	ENSDLEG00000007591	TMX1 (ENSDLEG00000007582)	FRMD6 (ENSDLEG00000007569)	ENSDLEG00000007567	ENSDLEG00000007563	RTRAF (ENSDLEG00000007540)	NID2 (ENSDLEG00000007498)	ENSDLEG00000007463	ENSDLEG00000007427 ##22	PTGDR (ENSDLEG00000007421)	PTGER2 (ENSDLEG00000007415)	ENSDLEG00000007411	TXNDC16 (ENSDLEG00000007403)	GPR137C (ENSDLEG00000007394)	ERO1A (ENSDLEG00000007383)	PSMC6 (ENSDLEG00000007372)	STYX (ENSDLEG00000007363)	GNPNAT1 (ENSDLEG00000007354)	FERMT2 (ENSDLEG00000007306)	DDHD1 (ENSDLEG00000007258)	ENSDLEG00000007241	ENSDLEG00000007237	BMP4 (ENSDLEG00000007233)	CDKN3 (ENSDLEG00000007222)
Vaquita	MODERN SPECIES	11	DMAC2L (ENSPSNG00000015252)	CDKL1 (ENSPSNG00000015390)	MAP4K5 (ENSPSNG00000015487)	ATL1 (ENSPSNG00000015894)	SAV1 (ENSPSNG00000016010)	NIN (ENSPSNG00000016131)	PYGL (ENSPSNG00000016529)	ENSPSNG00000016687	TRIM9 (ENSPSNG00000016917)	ENSPSNG00000016999	TMX1 (ENSPSNG00000017080)	FRMD6 (ENSPSNG00000017133)	GNG2 (ENSPSNG00000017215)	RTRAF (ENSPSNG00000017269)	NID2 (ENSPSNG00000017331)	ENSPSNG00000017459 ##22	PTGDR (ENSPSNG00000017508)	PTGER2 (ENSPSNG00000017549)	ENSPSNG00000017582	TXNDC16 (ENSPSNG00000017614)	ENSPSNG00000017649	GPR137C (ENSPSNG00000017714)	ERO1A (ENSPSNG00000017782)	PSMC6 (ENSPSNG00000017834)	STYX (ENSPSNG00000017897)	GNPNAT1 (ENSPSNG00000017942)	FERMT2 (ENSPSNG00000018008)	DDHD1 (ENSPSNG00000018156)	ENSPSNG00000006071	BMP4 (ENSPSNG00000006096)	CDKN3 (ENSPSNG00000006158)
Blue whale	MODERN SPECIES	11	ENSBMSG00010004115	DMAC2L (ENSBMSG00010004144)	CDKL1 (ENSBMSG00010004194)	MAP4K5 (ENSBMSG00010004241)	ATL1 (ENSBMSG00010004299)	SAV1 (ENSBMSG00010004334)	NIN (ENSBMSG00010004695)	PYGL (ENSBMSG00010005107)	TRIM9 (ENSBMSG00010005267)	ENSBMSG00010005333	TMX1 (ENSBMSG00010005352)	FRMD6 (ENSBMSG00010005417)	GNG2 (ENSBMSG00010005461)	RTRAF (ENSBMSG00010005489)	NID2 (ENSBMSG00010005533)	ENSBMSG00010005619 ##22	ENSBMSG00010005641	PTGDR (ENSBMSG00010005665)	PTGER2 (ENSBMSG00010005087)	TXNDC16 (ENSBMSG00010005111)	ENSBMSG00010005135	GPR137C (ENSBMSG00010005147)	ERO1A (ENSBMSG00010005172)	PSMC6 (ENSBMSG00010005191)	ENSBMSG00010005205	GNPNAT1 (ENSBMSG00010005228)	FERMT2 (ENSBMSG00010005249)	DDHD1 (ENSBMSG00010005355)	ENSBMSG00010005398	ENSBMSG00010005415	CDKN3 (ENSBMSG00010005456)
Laurasiatheria_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Laurasiatheria_c	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Chiroptera	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Microchiroptera	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Microbat	MODERN SPECIES	1279										SMIM24 (ENSMLUG00000006483) #14	NFIC (ENSMLUG00000006476) #15	ENSMLUG00000006471	NCLN (ENSMLUG00000022540) #17	ENSMLUG00000007046 #19	GNA11 (ENSMLUG00000006991) #20	ENSMLUG00000013756 ##22	TLE6 (ENSMLUG00000013752) ##22	ENSMLUG00000023178	THOP1 (ENSMLUG00000014305)	SGTA (ENSMLUG00000010345)	SLC39A3 (ENSMLUG00000014303)	DIRAS1 (ENSMLUG00000002744)	GNG7 (ENSMLUG00000029543)	GADD45B (ENSMLUG00000009419)	LMNB2 (ENSMLUG00000013317)	TIMM13 (ENSMLUG00000014659)	TMPRSS9 (ENSMLUG00000014649)	SPPL2B (ENSMLUG00000013101)	ENSMLUG00000013097	LINGO3 (ENSMLUG00000004451)	OAZ1 (ENSMLUG00000004446)
Carnivora	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Felidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Panthera	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Tiger	MODERN SPECIES	54	MAP2K2 (ENSPTIG00000010880)	PIAS4 (ENSPTIG00000012378)	EEF2 (ENSPTIG00000012837)	ATCAY (ENSPTIG00000013063)	ENSPTIG00000015790	MRPL54 (ENSPTIG00000017727)	PIP5K1C (ENSPTIG00000018042)	GIPC3 (ENSPTIG00000020400) #8	HMG20B (ENSPTIG00000021062) #9	FZR1 (ENSPTIG00000021304) #12	SMIM24 (ENSPTIG00000021624) #14	NFIC (ENSPTIG00000021743) #15	CELF5 (ENSPTIG00000005338) #16	GNA15 (ENSPTIG00000006851) #19	ENSPTIG00000007808 #20	ENSPTIG00000008105 ##22	TLE2 (ENSPTIG00000008843) #22	ENSPTIG00000010278 ##22	ENSPTIG00000010576	ZNF556 (ENSPTIG00000011070)	ZNF555 (ENSPTIG00000011529)	ZNF554 (ENSPTIG00000011725)	THOP1 (ENSPTIG00000012118)	SGTA (ENSPTIG00000013472)	SLC39A3 (ENSPTIG00000013803)	DIRAS1 (ENSPTIG00000005639)	GNG7 (ENSPTIG00000014250)	GADD45B (ENSPTIG00000014382)	ENSPTIG00000014820	ENSPTIG00000015491	LSM7 (ENSPTIG00000016252)
Caniformia	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Ursidae	ANCESTRAL SPECIES	20	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00390000003403	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
Ursus	ANCESTRAL SPECIES	16	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00730000111899	ENSGT00390000003420.b #8	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.b #24	ENSGT00940000163425.c	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
American black bear	MODERN SPECIES	3404															GNA11 (ENSUAMG00000000074) #20	ENSUAMG00000027635 ##22
Polar bear	MODERN SPECIES	455	MATK (ENSUMAG00000007427)	ENSUMAG00000007421	MRPL54 (ENSUMAG00000007416)	PIP5K1C (ENSUMAG00000007390)	ENSUMAG00000007385	ENSUMAG00000007383	ENSUMAG00000007381 #8	MFSD12 (ENSUMAG00000007358) #10	TEKTIP1 (ENSUMAG00000007354) #11	FZR1 (ENSUMAG00000007307) #12	ENSUMAG00000007296	NFIC (ENSUMAG00000007265) #15	ENSUMAG00000007241	GNA15 (ENSUMAG00000007215) #19	GNA11 (ENSUMAG00000007211) #20	ENSUMAG00000007196 ##22	ENSUMAG00000007194 #22	ENSUMAG00000007190 #22	ENSUMAG00000007167	ENSUMAG00000007158	ENSUMAG00000007151 #24	ENSUMAG00000007139	ENSUMAG00000007135 #24	ZNF555 (ENSUMAG00000007119)	ZNF554 (ENSUMAG00000007110)	THOP1 (ENSUMAG00000006911)	SGTA (ENSUMAG00000006851)	SLC39A3 (ENSUMAG00000006848)	DIRAS1 (ENSUMAG00000006847)	GNG7 (ENSUMAG00000006844)	GADD45B (ENSUMAG00000006840)
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT00940000154660.a #14	ENSGT00950000185935	ENSGT00950000182916.a.a #15	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT00940000164918.e	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915	ENSGT01100000263497.E.a.b	ENSGT00950000182964.a.b.b	ENSGT00940000160274	ENSGT00390000014000
American mink	MODERN SPECIES	175	CACTIN (ENSNVIG00000006539)	TBXA2R (ENSNVIG00000006523) #7	GIPC3 (ENSNVIG00000006504) #8	HMG20B (ENSNVIG00000006433) #9	MFSD12 (ENSNVIG00000006407) #10	TEKTIP1 (ENSNVIG00000006395) #11	FZR (ENSNVIG00000006305) #12	DOHH (ENSNVIG00000006293) #13	CS077 (ENSNVIG00000006275) #14	NFIC (ENSNVIG00000006247) #15	ENSNVIG00000006149	NCLN (ENSNVIG00000006116) #17	S1PR4 (ENSNVIG00000006107) #18	GNA15 (ENSNVIG00000006085) #19	GNA11 (ENSNVIG00000006010) #20	ENSNVIG00000005979 ##22	TLE2 (ENSNVIG00000005768) #22	ENSNVIG00000005725 ##22	ENSNVIG00000005595	ENSNVIG00000005559	ZNF556 (ENSNVIG00000005545)	ZNF555 (ENSNVIG00000005522)	ZNF554 (ENSNVIG00000005517)	THOP1 (ENSNVIG00000005485)	SGTA (ENSNVIG00000005464)	SLC39A3 (ENSNVIG00000005457)	DIRAS1 (ENSNVIG00000005451)	GNG7 (ENSNVIG00000005433)	GA45B (ENSNVIG00000005407)	LMNB2 (ENSNVIG00000005371)	TIMM13 (ENSNVIG00000005354)
Gnathostomata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Euteleostomi	ANCESTRAL SPECIES	249								ENSGT01050000244887.A.b.a ##18	ENSGT00950000182925.C	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000154716	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480
Actinopterygii	ANCESTRAL SPECIES	43	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000172876	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.b.r.a ##22	ENSGT00940000153241.A	ENSGT00390000013287	ENSGT00500000045074	ENSGT00940000164811	ENSGT00940000161259.B	ENSGT00940000165296	ENSGT00940000162569.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161347	ENSGT00940000158510	ENSGT00940000165714	ENSGT00950000183083.a.d.b	ENSGT00940000161259.A	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348	ENSGT00390000015537	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108
Neopterygii	ANCESTRAL SPECIES	16	ENSGT00940000153434	ENSGT00390000002374	ENSGT00940000157487	ENSGT00390000008742	ENSGT00940000156437	ENSGT00390000003364	ENSGT00940000158577	ENSGT00940000172876	ENSGT00940000159488	ENSGT01030000234519.e.a.a.a.a.b.r.a ##22	ENSGT00940000153241.A	ENSGT00390000013287	ENSGT00940000165296	ENSGT00940000162569.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000161347	ENSGT00940000158510	ENSGT00940000165714	ENSGT00950000183083.a.d.b	ENSGT00940000161259.A	ENSGT00940000161970	ENSGT00940000154422	ENSGT00940000161348	ENSGT00390000015537	ENSGT00940000176240	ENSGT00940000171049	ENSGT00940000176108	ENSGT00940000155770	ENSGT00920000149159	ENSGT00940000159384
Osteoglossocephalai	ANCESTRAL SPECIES	627														ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Osteoglossiformes	ANCESTRAL SPECIES	21	ENSGT00940000159170.c	ENSGT00940000164939.a.a	ENSGT00940000154737.c.h	ENSGT00940000160191	ENSGT00530000063841.b.a	ENSGT00940000159440.e	ENSGT00940000166572.b	ENSGT00440000034888	ENSGT00940000157273	ENSGT00550000075067.e	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296.b	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.a ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.c	ENSGT00530000063615.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.a.a	ENSGT00390000008279.b.k
P. kingsleyae	MODERN SPECIES	57	sh3gl1a (ENSPKIG00000007850)	stap2a (ENSPKIG00000007926)	FSD1 (ENSPKIG00000007991)	gprc5ba (ENSPKIG00000008051)	sema4e (ENSPKIG00000008134)	cactin (ENSPKIG00000008269)	scamp4 (ENSPKIG00000008326)	hdgfl2 (ENSPKIG00000008374)	ENSPKIG00000008413	AP3D1 (ENSPKIG00000008440)	cdc34a (ENSPKIG00000008485)	C2CD4C (ENSPKIG00000008512)	ENSPKIG00000008524	gna11b (ENSPKIG00000008559)	ENSPKIG00000008606 ##22	ENSPKIG00000008653 ##22	ENSPKIG00000008699 ##22	PLPP2 (ENSPKIG00000008764)	ENSPKIG00000008806	theg (ENSPKIG00000008849)	shda (ENSPKIG00000008906)	ENSPKIG00000008963	ENSPKIG00000008984	ebi3 (ENSPKIG00000009019)	cks2 (ENSPKIG00000009044)	odf3l2a (ENSPKIG00000009061)	crlf1a (ENSPKIG00000009089)	ENSPKIG00000009120	keap1a (ENSPKIG00000009154)	zgc:110158 (ENSPKIG00000009240)	ENSPKIG00000009391
Clupeocephala	ANCESTRAL SPECIES	125														ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000160480.c.b	ENSGT00940000156569.a.b.a	ENSGT00940000165458	ENSGT00950000183049.C.a.b	ENSGT00390000012355.A.b	ENSGT00940000155914.c.b	ENSGT00390000018395	ENSGT00500000045074	ENSGT00390000005235	ENSGT00720000108823
Otomorpha	ANCESTRAL SPECIES	5					ENSGT00940000165728	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035	ENSGT00940000156569.a.b.b	ENSGT00390000008279.b
Clupeiformes	ANCESTRAL SPECIES	456												ENSGT00940000164811.a.b.b	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00940000155885.b	ENSGT00940000155603.A.a.a.b	ENSGT00940000159004.a	ENSGT00530000063615.a
Atlantic herring	MODERN SPECIES	14	ENSCHAG00000020554	ENSCHAG00000020567	mkxb (ENSCHAG00000020809)	rab18b (ENSCHAG00000020817)	ENSCHAG00000020870	ENSCHAG00000020882	ENSCHAG00000021013	ENSCHAG00000021197	ENSCHAG00000021344	ENSCHAG00000021355	ENSCHAG00000021379	cdc34b (ENSCHAG00000021382)	C2CD4C (ENSCHAG00000021399)	gna11b (ENSCHAG00000021406)	chico (ENSCHAG00000021477) ##22	tle2c (ENSCHAG00000021518) ##22	ENSCHAG00000021523	ENSCHAG00000021557	VANGL2 (ENSCHAG00000021571)	NCSTN (ENSCHAG00000021666)	ENSCHAG00000022936	ENSCHAG00000022937	ENSCHAG00000022948	ENSCHAG00000022956	ENSCHAG00000022963	ENSCHAG00000022968	ptrhd1 (ENSCHAG00000022979)	rab12 (ENSCHAG00000022982)	ENSCHAG00000022997	ENSCHAG00000023004	acss2l (ENSCHAG00000023037)
Denticle herring	MODERN SPECIES	14	acss2l (ENSDCDG00000034543)	MTCL1 (ENSDCDG00000034531)	rab12 (ENSDCDG00000034529)	NCSTN (ENSDCDG00000034268)	VANGL2 (ENSDCDG00000034224)	fcer1gl (ENSDCDG00000034222)	ENSDCDG00000034220	ENSDCDG00000034219	ENSDCDG00000034215	ENSDCDG00000034206	ENSDCDG00000034202	ENSDCDG00000034200	cdc34b (ENSDCDG00000034198)	gna11b (ENSDCDG00000034196)	tle5 (ENSDCDG00000034194) ##22	tle2c (ENSDCDG00000034192) ##22	PLPP2 (ENSDCDG00000034189)	ENSDCDG00000034187	shda (ENSDCDG00000034184)	yju2 (ENSDCDG00000034182)	ENSDCDG00000034177	ENSDCDG00000034050	KCNJ10 (ENSDCDG00000034043)	ENSDCDG00000034041	ENSDCDG00000034039	ENSDCDG00000034037	ENSDCDG00000034036	ENSDCDG00000034033	kirrel1b (ENSDCDG00000034013)	cadm3 (ENSDCDG00000033919)	sdhc (ENSDCDG00000033909)
Otophysi	ANCESTRAL SPECIES	122	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000154716.hc.a.a	ENSGT00940000160088 #25	ENSGT01030000234518.B.a.a	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT00940000154992.a.a	ENSGT01100000263681	ENSGT00940000156210.c	ENSGT00940000159301.c.b	ENSGT01030000235169	ENSGT00530000063698.a.b.d
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	28																ENSGT01030000234519.e.a.a.b.a.a.b.b.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT00940000162569.b.k.a	ENSGT00940000165296	ENSGT00940000161259.B.a	ENSGT00940000164811.a.a	ENSGT00550000075067	ENSGT00940000153942.a.f	ENSGT00940000157273	ENSGT00440000034888	ENSGT00940000166572	ENSGT01030000234539.a.a.a.f	ENSGT00940000153487.b.a.s.a
Characiphysae_b	ANCESTRAL SPECIES	25	ENSGT00390000018299.a	ENSGT00940000157036.e.a	ENSGT00940000166752	ENSGT00940000153487.b.a.s.a	ENSGT01030000234539.a.a.a.f	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22
Characoidei	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b.a ##22
Mexicana tetra	MODERN SPECIES	20	ENSAMXG00000036488	ENSAMXG00000001104	ENSAMXG00000037937	ENSAMXG00000001109	ENSAMXG00000001110	ENSAMXG00000033257	ENSAMXG00000001113	ENSAMXG00000036132	ENSAMXG00000035848	micos13 (ENSAMXG00000042996)	hsd11b1la (ENSAMXG00000033808)	rgmd (ENSAMXG00000036638)	ENSAMXG00000039615	ENSAMXG00000034719 #16	ENSAMXG00000039384	ENSAMXG00000031376 ##22	ENSAMXG00000041362 ##22	tle2a (ENSAMXG00000017871) ##22	plpp2b (ENSAMXG00000033432)	mier2 (ENSAMXG00000017858)	s1pr3a (ENSAMXG00000025819) ##18	shdb (ENSAMXG00000034569)	ENSAMXG00000033433 #26	ENSAMXG00000017840 #26	shc2 (ENSAMXG00000017823)	cks2 (ENSAMXG00000040722)	odf3l2b (ENSAMXG00000037822)	CPAMD8 (ENSAMXG00000017810)	rex1bd (ENSAMXG00000041343)	crlf1b (ENSAMXG00000017785)	tmem59l (ENSAMXG00000017776)
Electric eel	MODERN SPECIES	956										ENSEEEG00000010121	C2CD4C (ENSEEEG00000010124)	ENSEEEG00000010126	gna15.4 (ENSEEEG00000010128)	gna11a (ENSEEEG00000010146)	tle5 (ENSEEEG00000010155) ##22	ENSEEEG00000010157 ##22
Characiphysae	DUPLICATION
Characiphysae	ANCESTRAL SPECIES	28	ENSGT01100000264042	ENSGT00940000157036.e.a	ENSGT00940000166752	ENSGT00940000153487.b.a.s.a	ENSGT01030000234539.a.a.a.f	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.a ##22
Characiphysae_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.a ##22
Electric eel	MODERN SPECIES	339	xbp1 (ENSEEEG00000008589)	ZNRF3 (ENSEEEG00000008586)	coq5 (ENSEEEG00000008534)	gnptg (ENSEEEG00000008531)	ENSEEEG00000008529	dnaaf3 (ENSEEEG00000008528)	ENSEEEG00000008206	CRHR1 (ENSEEEG00000008179)	FAM171A2 (ENSEEEG00000008178)	dcakd (ENSEEEG00000008176)	ENSEEEG00000008174	ralbp1 (ENSEEEG00000008137)	C2CD4C (ENSEEEG00000008134)	gna11b (ENSEEEG00000008115)	ENSEEEG00000008109 ##22	tle2c (ENSEEEG00000008104) ##22	PLPP2 (ENSEEEG00000008103)	shda (ENSEEEG00000008101)	yju2 (ENSEEEG00000008098)	ENSEEEG00000008097	scn12aa (ENSEEEG00000008071)	ACVR2B (ENSEEEG00000008066)	ENSEEEG00000008063	ENSEEEG00000008062	ENSEEEG00000008060
Channel catfish	MODERN SPECIES	1	mbd3b (ENSIPUG00000001063)	MBD3 (ENSIPUG00000001096)	tcf3b (ENSIPUG00000001114)	ENSIPUG00000001238	map2k2a (ENSIPUG00000001241)	pias4 (ENSIPUG00000001271)	scamp4 (ENSIPUG00000001316)	chaf1a (ENSIPUG00000001333)	UBXN6 (ENSIPUG00000001356)	hdgfl2 (ENSIPUG00000001382)	ap3d1 (ENSIPUG00000001409)	C2CD4C (ENSIPUG00000001665)	gna15.4 (ENSIPUG00000001668)	gna11a (ENSIPUG00000001673)	tle5 (ENSIPUG00000001688) ##22	ENSIPUG00000001703 ##22	ENSIPUG00000001716 ##22	tle2a (ENSIPUG00000001748) ##22	ENSIPUG00000001808	klc4 (ENSIPUG00000001836)	soul4 (ENSIPUG00000001884)	ptk7 (ENSIPUG00000001905)	MARK1 (ENSIPUG00000001985)	ENSIPUG00000002167	ENSIPUG00000002193	rcor3 (ENSIPUG00000002202)	kcnh1b (ENSIPUG00000002236)	ENSIPUG00000002259	ENSIPUG00000002286	ENSIPUG00000002295	commd2 (ENSIPUG00000002307)
Characiphysae	ANCESTRAL SPECIES	20	ENSGT00940000166845	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000160088 #25	ENSGT01030000234534.B.a.a.a.a.a.b	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a.j	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000166035	ENSGT00940000156569.a.b.b	ENSGT00390000008279.b	ENSGT00950000183049.C.a.a	ENSGT00940000156705
Characiphysae_b	ANCESTRAL SPECIES	57	ENSGT00940000166845	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000160088 #25	ENSGT01030000234518.B.a.a	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT01100000263681.c	ENSGT00940000154992.a.a	ENSGT00940000156210.c	ENSGT00940000159301.c.b	ENSGT01030000235169	ENSGT01030000234918.a	ENSGT00940000155020.u.b.f	ENSGT00530000063698.a.b.d
Characoidei	ANCESTRAL SPECIES	45	ENSGT00940000166845	ENSGT00390000017580	ENSGT00940000154742.a	ENSGT00390000007058	ENSGT00940000157113.d	ENSGT00940000156523.b.d	ENSGT00950000182925.C.a.a	ENSGT00940000160088 #25	ENSGT01030000234518.B.a.a	ENSGT00940000159261.d.b	ENSGT00940000154639	ENSGT00940000155702	ENSGT00940000161259.B.b	ENSGT00940000162569.b.k.b	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000155603.A.a.a.b	ENSGT00940000154630.a	ENSGT00940000159004.a	ENSGT00530000063615.a	ENSGT01100000263681.c	ENSGT00940000154992.a.a	ENSGT00940000156210.c	ENSGT00940000159301.c.b	ENSGT01030000235169	ENSGT01030000234918.a.c	ENSGT00940000155020.u.b.f	ENSGT00530000063698.a.b.d
Mexicana tetra	MODERN SPECIES	8	ankrd12 (ENSAMXG00000043499)	twsg1a (ENSAMXG00000041684)	rnf126 (ENSAMXG00000042430)	ENSAMXG00000042554	ENSAMXG00000012022	ENSAMXG00000031474	CELF5 (ENSAMXG00000012028) #16	sirt6 (ENSAMXG00000042716) #25	RXFP3 (ENSAMXG00000025623)	ENSAMXG00000040794	ralbp1 (ENSAMXG00000041416)	RAB31 (ENSAMXG00000012055)	C2CD4C (ENSAMXG00000025624)	gna11b (ENSAMXG00000012068)	tle5 (ENSAMXG00000034587) ##22	tle2c (ENSAMXG00000012073) ##22	PLPP2 (ENSAMXG00000043998)	ENSAMXG00000028255	theg (ENSAMXG00000029722)	shda (ENSAMXG00000034696)	yju2 (ENSAMXG00000039999)	ENSAMXG00000041982	scn12aa (ENSAMXG00000012098)	ACVR2B (ENSAMXG00000032156)	crygn1 (ENSAMXG00000042829)	ENSAMXG00000038554	ENSAMXG00000029635	ENSAMXG00000043781	ENSAMXG00000035474	PTPRM (ENSAMXG00000012131)	ENSAMXG00000012186
Red-bellied piranha	MODERN SPECIES	48									ENSPNAG00000023493	ENSPNAG00000023540	ralbp1 (ENSPNAG00000023593)	RAB31 (ENSPNAG00000023626)	C2CD4C (ENSPNAG00000023639)	gna11b (ENSPNAG00000023687)	ENSPNAG00000023723 ##22	tle2c (ENSPNAG00000023737) ##22	PLPP2 (ENSPNAG00000023774)	ENSPNAG00000023796	theg (ENSPNAG00000023824)	shda (ENSPNAG00000023835)	yju2 (ENSPNAG00000023841)	scn12aa (ENSPNAG00000024054)	ACVR2B (ENSPNAG00000024111)	crygn1 (ENSPNAG00000024121)	ENSPNAG00000024128	ENSPNAG00000024145	ENSPNAG00000024156	ENSPNAG00000024172	PTPRM (ENSPNAG00000024266)	LRRC30 (ENSPNAG00000024271)	ENSPNAG00000024288
Channel catfish	MODERN SPECIES	12	ankrd12 (ENSIPUG00000017743)	ENSIPUG00000017753	twsg1a (ENSIPUG00000017789)	rnf126 (ENSIPUG00000017817)	ENSIPUG00000017853	ENSIPUG00000017898	CELF5 (ENSIPUG00000017915) #16	sirt6 (ENSIPUG00000017946) #25	ENSIPUG00000017985	ENSIPUG00000017993	RALBP1 (ENSIPUG00000018010)	RAB31 (ENSIPUG00000018050)	C2cd4cC2CD4 family (ENSIPUG00000018074)	gna11b (ENSIPUG00000018081)	ENSIPUG00000018096 ##22	tle2c (ENSIPUG00000018122) ##22	plpp2 (ENSIPUG00000018135)	ENSIPUG00000018162	theg (ENSIPUG00000018180)	SHD (ENSIPUG00000018194)	CCDC94 (ENSIPUG00000018220)	scn12aa (ENSIPUG00000018236)	ENSIPUG00000018279	ACVR2B (ENSIPUG00000018290)	ENSIPUG00000018325	PTPRM (ENSIPUG00000018362)	ENSIPUG00000018674	thfp5 (ENSIPUG00000018680)	ENSIPUG00000018688	epb41l3b (ENSIPUG00000018699)	APCDD1 (ENSIPUG00000018750)
Cyprinoidei	ANCESTRAL SPECIES	409															ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Zebrafish	MODERN SPECIES	11	ctnnbl1 (ENSDARG00000011958)	ranbp3b (ENSDARG00000069056)	ENSDARG00000115610	pnhd (ENSDARG00000039070)	admp (ENSDARG00000025372)	ENSDARG00000110341	ENSDARG00000090727 #16	zgc:165603 (ENSDARG00000098702)	ENSDARG00000070661	sirt6 (ENSDARG00000102963) #25	ENSDARG00000090903	ralbp1 (ENSDARG00000078653)	ENSDARG00000115832	gna11b (ENSDARG00000053326)	chico (ENSDARG00000019588) ##22	tle2c (ENSDARG00000067832) ##22	PLPP2 (ENSDARG00000002231)	theg (ENSDARG00000078644)	shda (ENSDARG00000094243)	yju2 (ENSDARG00000026185)	scn12aa (ENSDARG00000090724)	ACVR2B (ENSDARG00000103108)	ENSDARG00000116628	crygn1 (ENSDARG00000102129)	ENSDARG00000100184	ENSDARG00000101479	ENSDARG00000099839	ENSDARG00000102106	abhd4 (ENSDARG00000102887)	dad1 (ENSDARG00000102105)	ENSDARG00000101890
Cyprininae	DUPLICATION
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	238	ENSGT00390000017580.a	ENSGT00940000154742.a.w	ENSGT00390000007058.e.a	ENSGT00940000157113.d.b	ENSGT00940000156523.b.d.b	ENSGT00950000182925.C.a.a.a.b	ENSGT00940000154716.hc.a.a.a	ENSGT00940000160088.a #25	ENSGT01030000234518.B.a.a.a	ENSGT00940000159261.d.b.a.b	ENSGT00940000154639.a.a	ENSGT00940000155702.a	ENSGT00940000161259.B.b.a	ENSGT00940000162569.b.k.b.j	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.a ##22	ENSGT00940000155885.b.c.a	ENSGT00940000155603.A.a.a.b.a	ENSGT00940000154630.a	ENSGT00940000159004.a.b	ENSGT00530000063615.a.m	ENSGT00940000154992.a.a.a	ENSGT01100000263681	ENSGT00940000156210.c.b	ENSGT00940000159301.c.b.a	ENSGT01030000235169.a	ENSGT01030000234918.b.a.a	ENSGT01030000234918.a.a.a.b	ENSGT01050000244939.a.a.b.a.a.b	ENSGT00390000016277.b.g
Goldfish	MODERN SPECIES	928					zgc:165603 (ENSCARG00000034523)	ENSCARG00000034537	sirt6 (ENSCARG00000056048) #25	RXFP3 (ENSCARG00000056609)	ENSCARG00000056613	ENSCARG00000056618	ralbp1 (ENSCARG00000056634)	ENSCARG00000056726	C2CD4C (ENSCARG00000056816)	gna11b (ENSCARG00000056829)	chico (ENSCARG00000056852) ##22	tle2c (ENSCARG00000056862) ##22	PLPP2 (ENSCARG00000056916)	ENSCARG00000056944	shda (ENSCARG00000056972)	yju2 (ENSCARG00000056991)	scn12aa (ENSCARG00000057260)	ENSCARG00000063663	ACVR2B (ENSCARG00000063686)	crygn1 (ENSCARG00000063826)	ENSCARG00000063861	ENSCARG00000063866	ENSCARG00000063877	TGM1 (ENSCARG00000063892)	TGM1 (ENSCARG00000063923)	abhd4 (ENSCARG00000063967)	dad1 (ENSCARG00000063973)
Cyprininae_a	ANCESTRAL SPECIES	59	ENSGT00940000154742.a.w	ENSGT00390000007058.e.a	ENSGT00940000157113.d.b	ENSGT00940000156523.b.d.b	ENSGT00950000182925.C.a.a.a.b	ENSGT00940000154201.a.a.b.d.m.a #16	ENSGT00940000154716.hc.a.a.a	ENSGT00940000160088.a #25	ENSGT01030000234518.B.a.a.a	ENSGT00940000159261.d.b.a.b	ENSGT00940000154639.a.a	ENSGT00940000155702.a	ENSGT00940000161259.B.b.a	ENSGT00940000162569.b.k.b.j	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.a ##22	ENSGT00940000155885.b.c.a	ENSGT00940000155603.A.a.a.b.a	ENSGT00940000154630.a	ENSGT00940000159004.a.b	ENSGT00530000063615.a.m	ENSGT00940000154992.a.a.a	ENSGT01100000263681.a	ENSGT00940000156210.c.b	ENSGT00940000159301.c.b.a	ENSGT01030000235169.a	ENSGT01030000234918.b.a.a	ENSGT01030000234918.a.a.a.b	ENSGT01050000244939.a.a.b.a.a.b	ENSGT00390000016277.b.g	ENSGT00390000016277.b.h
Common carp reference	MODERN SPECIES	29	ndufv2 (ENSCCRG00000008598)	ankrd12 (ENSCCRG00000060578)	twsg1a (ENSCCRG00000019155)	rnf126 (ENSCCRG00000063550)	ENSCCRG00000007981	ENSCCRG00000057140	ENSCCRG00000057494 #16	sirt6 (ENSCCRG00000033276) #25	ENSCCRG00000071034	ENSCCRG00000059460	ralbp1 (ENSCCRG00000044000)	ENSCCRG00000068061	ENSCCRG00000068438	gna11b (ENSCCRG00000007972)	chico (ENSCCRG00000062416) ##22	tle2c (ENSCCRG00000022359) ##22	ENSCCRG00000075002	ENSCCRG00000020756	theg (ENSCCRG00000065312)	shda (ENSCCRG00000007970)	yju2 (ENSCCRG00000007964)	scn12aa (ENSCCRG00000002248)	ENSCCRG00000007962	ENSCCRG00000002054	crygn1 (ENSCCRG00000002188)	ENSCCRG00000002192	ENSCCRG00000033239	ENSCCRG00000033237	ENSCCRG00000033233	abhd4 (ENSCCRG00000013990)	ENSCCRG00000011365
Golden-line barbel	MODERN SPECIES	279								zgc:165603 (ENSSGRG00000050493)	sirt6 (ENSSGRG00000050494) #25	ENSSGRG00000050495	RALBP1 (ENSSGRG00000050497)	ENSSGRG00000050498	C2CD4C (ENSSGRG00000050503)	gna11b (ENSSGRG00000050507)	chico (ENSSGRG00000050557) ##22	tle2c (ENSSGRG00000050559) ##22	PLPP2 (ENSSGRG00000050561)	shda (ENSSGRG00000050565)	yju2 (ENSSGRG00000050568)	scn12aa (ENSSGRG00000050576)	ENSSGRG00000050578	ACVR2B (ENSSGRG00000050595)	crygn1 (ENSSGRG00000050998)	ENSSGRG00000050999	ENSSGRG00000051000	ENSSGRG00000051001	ENSSGRG00000051002	ENSSGRG00000051004	abhd4 (ENSSGRG00000051008)	dad1 (ENSSGRG00000051009)	ENSSGRG00000051013
Cyprininae	ANCESTRAL SPECIES	142	ENSGT00940000154742.a.x	ENSGT00390000007058.e.b	ENSGT00940000157113.d.a	ENSGT00940000156523.b.d.a	ENSGT00950000182925.C.a.a.b	ENSGT00940000162487.v	ENSGT00950000183112.b.a.a.a.b	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160088.b #25	ENSGT00940000159261.d.b.a.a	ENSGT00940000154639.a.b	ENSGT00940000155702.b	ENSGT00940000161259.B.b.b	ENSGT00940000162569.b.k.b.i	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.b ##22	ENSGT00940000155885.b.c.b	ENSGT00940000155603.A.a.a.b.b	ENSGT00940000159004.a.a	ENSGT00530000063615.a.n	ENSGT00940000154992.a.a.b	ENSGT00940000156210.c.a	ENSGT00940000159301.c.b.b	ENSGT01030000235169.b	ENSGT01030000234918.b.a.b	ENSGT01030000234918.a.a.b	ENSGT01050000244939.a.a.b.a.a.a	ENSGT00390000016277.b.h	ENSGT00390000003324.fb	ENSGT00950000182977.B.b.a.c.b	ENSGT00950000182977.B.b.a.d.c.a.j.b
Goldfish	DUPLICATION
Goldfish	MODERN SPECIES	11	ENSCARG00000005037	prpf38b (ENSCARG00000005019)	eeig2a (ENSCARG00000005008)	KIF5B (ENSCARG00000004977)	epc1b (ENSCARG00000004918)	ITGB1 (ENSCARG00000004851)	ITGB1 (ENSCARG00000004165)	nrp1b (ENSCARG00000003966)	pard3ab (ENSCARG00000003637)	ENSCARG00000003600	ENSCARG00000003568	ENSCARG00000003547	KCNQ3 (ENSCARG00000003466)	ENSCARG00000003453	efr3a (ENSCARG00000003446)	tle2c (ENSCARG00000003432) ##22	PLPP2 (ENSCARG00000003426)	chico (ENSCARG00000003418) ##22	gna11b (ENSCARG00000003413)	ENSCARG00000003401	ENSCARG00000003393	pax3a (ENSCARG00000003368)	acsl3b (ENSCARG00000003253)	scg2b (ENSCARG00000003242)	ap1s3b (ENSCARG00000003233)	ENSCARG00000003222	cul3a (ENSCARG00000003117)	mbnl1 (ENSCARG00000003074)	ENSCARG00000003059	ENSCARG00000002834	ENSCARG00000002780
Goldfish	MODERN SPECIES	11	twsg1a (ENSCARG00000016950)	rnf126 (ENSCARG00000016959)	ENSCARG00000016979	ENSCARG00000017015	ENSCARG00000017023	zgc:165603 (ENSCARG00000017050)	RXFP3 (ENSCARG00000017122)	ENSCARG00000017125	ralbp1 (ENSCARG00000017138)	ENSCARG00000017180	C2CD4C (ENSCARG00000017218)	gna11b (ENSCARG00000017225)	ENSCARG00000017259	chico (ENSCARG00000017262) ##22	ENSCARG00000017281	tle2c (ENSCARG00000017289) ##22	PLPP2 (ENSCARG00000017329)	ENSCARG00000017350	ENSCARG00000017370	shda (ENSCARG00000017377)	yju2 (ENSCARG00000017388)	ACVR2B (ENSCARG00000017427)	crygn1 (ENSCARG00000017657)	ENSCARG00000017684	ENSCARG00000017694	ENSCARG00000017703	TGM1 (ENSCARG00000017723)	abhd4 (ENSCARG00000017849)	dad1 (ENSCARG00000017887)	ENSCARG00000017901	ENSCARG00000017912
Cyprininae_a	ANCESTRAL SPECIES	162	ENSGT00390000017580.b	ENSGT00940000154742.a.x	ENSGT00390000007058.e.b	ENSGT00940000157113.d.a	ENSGT00940000156523.b.d.a	ENSGT00950000182925.C.a.a.b	ENSGT00940000162487.v	ENSGT00940000154201.a.a.b.d.m.b #16	ENSGT00940000160088.b #25	ENSGT00940000159261.d.b.a.a	ENSGT00940000154639.a.b	ENSGT00940000155702.b	ENSGT00940000161259.B.b.b	ENSGT00940000162569.b.k.b.i	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.b.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.c.b ##22	ENSGT00940000155885.b.c.b	ENSGT00940000155603.A.a.a.b.b	ENSGT00940000159004.a.a	ENSGT00530000063615.a.n	ENSGT00940000154992.a.a.b	ENSGT01100000263681.b	ENSGT00940000156210.c.a	ENSGT00940000159301.c.b.b	ENSGT01030000235169.b	ENSGT01030000234918.b.a.b	ENSGT01030000234918.a.a.b	ENSGT01050000244939.a.a.b.a.a.a
Golden-line barbel	MODERN SPECIES	637									ENSSGRG00000023502	ENSSGRG00000023504	ralbp1 (ENSSGRG00000023506)	ENSSGRG00000023669	C2CD4C (ENSSGRG00000023670)	gna11b (ENSSGRG00000023672)	chico (ENSSGRG00000023812) ##22	tle2c (ENSSGRG00000023814) ##22	PLPP2 (ENSSGRG00000023816)	shda (ENSSGRG00000023819)	yju2 (ENSSGRG00000023820)	scn12aa (ENSSGRG00000023823)	ENSSGRG00000024204	ACVR2B (ENSSGRG00000024220)	crygn1 (ENSSGRG00000024558)	ENSSGRG00000024559	ENSSGRG00000024561	ENSSGRG00000024562	ENSSGRG00000024563	ENSSGRG00000024564	abhd4 (ENSSGRG00000024565)	dad1 (ENSSGRG00000024566)	ENSSGRG00000024567
Common carp reference	MODERN SPECIES	21	twsg1a (ENSCCRG00000082597)	rnf126 (ENSCCRG00000017665)	ENSCCRG00000011622	ENSCCRG00000022356	ENSCCRG00000035908	ENSCCRG00000060440	ENSCCRG00000072717	ENSCCRG00000079643 #16	sirt6 (ENSCCRG00000033266) #25	ENSCCRG00000059564	ralbp1 (ENSCCRG00000044174)	ENSCCRG00000059469	ENSCCRG00000062892	gna11b (ENSCCRG00000054256)	chico (ENSCCRG00000054548) ##22	tle2c (ENSCCRG00000074518) ##22	ENSCCRG00000022350	ENSCCRG00000076483	shda (ENSCCRG00000046378)	yju2 (ENSCCRG00000045648)	scn12aa (ENSCCRG00000033268)	ENSCCRG00000045182	crygn1 (ENSCCRG00000033245)	ENSCCRG00000063979	ENSCCRG00000033243	ENSCCRG00000056657	ENSCCRG00000012598	abhd4 (ENSCCRG00000029455)	dad1 (ENSCCRG00000014002)	ENSCCRG00000018948	ENSCCRG00000020678
Cyprininae	ANCESTRAL SPECIES	113	ENSGT00940000161534.bc.a	ENSGT00940000156834.d	ENSGT00940000158639	ENSGT00950000182975.a.a.a.a.a.a	ENSGT00940000165728.f	ENSGT00940000166572.c.b	ENSGT00440000034888.b	ENSGT00940000157273.j	ENSGT00940000153942.a.f.d	ENSGT00550000075067.l.b	ENSGT00940000164811.a.a.c	ENSGT00940000161259.B.a.c	ENSGT00940000165296.d.a.a.a	ENSGT00940000162569.b.k.a.d	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.d ##22	ENSGT01030000234519.e.a.a.b.b.a.b.g.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b.h.f ##22	ENSGT00940000155885.b.d.a	ENSGT01030000234573.A.b.b.a.f	ENSGT01050000244887.A.b.a.d ##18	ENSGT00940000159004.b.i	ENSGT00940000159237.`b.a.b #26	ENSGT00950000182870.a.a.a.a.h	ENSGT00940000166035.g.b	ENSGT00390000008279.b.j	ENSGT00950000183049.C.a.a.g.a	ENSGT00940000156705.d	ENSGT00940000155914.c.a.c.a	ENSGT00390000013515.e	ENSGT00390000006337.b
Cyprininae_a	ANCESTRAL SPECIES	40	ENSGT00940000158639	ENSGT00950000182975.a.a.a.a.a.a	ENSGT00940000165728.f	ENSGT00940000166572.c.b	ENSGT00440000034888.b	ENSGT00940000157273.j	ENSGT00940000153942.a.f.d	ENSGT00550000075067.l.b	ENSGT00940000164811.a.a.c	ENSGT00940000161259.B.a.c	ENSGT00940000165296.c.a	ENSGT00940000165296.d.a.a.a	ENSGT00940000165296.d.a.b	ENSGT00940000162569.b.k.a.d	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.f.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.d ##22	ENSGT00990000214147	ENSGT01030000234519.e.a.a.b.b.a.b.h.f ##22	ENSGT00940000155885.b.d.a	ENSGT01030000234573.A.b.b.a.f	ENSGT01050000244887.A.b.a.d ##18	ENSGT00940000159004.b.i	ENSGT00940000166035.g.b	ENSGT00390000008279.b.j	ENSGT00950000183049.C.a.a.g.a	ENSGT00940000156705.d	ENSGT00940000155914.c.a.c.a	ENSGT00390000013515.e	ENSGT00390000006337.b	ENSGT00990000206265	ENSGT00940000159808.c
Golden-line barbel	MODERN SPECIES	80	camsap2a (ENSSGRG00000032605)	si:ch211-129c21.1 (ENSSGRG00000032584)	scamp4 (ENSSGRG00000032581)	chaf1a (ENSSGRG00000032561)	ubxn6 (ENSSGRG00000032557)	ENSSGRG00000032556	hdgfl2 (ENSSGRG00000032554)	ap3d1 (ENSSGRG00000032511)	cdc34a (ENSSGRG00000032505)	C2CD4C (ENSSGRG00000032502)	gna15.1 (ENSSGRG00000032499)	ENSSGRG00000032497	ENSSGRG00000032494	gna11a (ENSSGRG00000032212)	tle5 (ENSSGRG00000032211) ##22	ENSSGRG00000032209 ##22	ENSSGRG00000032207	tle2a (ENSSGRG00000031261) ##22	plpp2b (ENSSGRG00000031250)	mier2 (ENSSGRG00000031249)	s1pr3a (ENSSGRG00000031248) ##18	shdb (ENSSGRG00000031247)	ENSSGRG00000031243	shc2 (ENSSGRG00000031241)	odf3l2b (ENSSGRG00000031240)	ENSSGRG00000031238	rex1bd (ENSSGRG00000031237)	tmem59l (ENSSGRG00000031235)	ssbp4 (ENSSGRG00000031232)	ENSSGRG00000031231	fkbp8 (ENSSGRG00000031230)
Euteleosteomorpha	ANCESTRAL SPECIES	39	ENSGT00940000154737.c.h	ENSGT00940000160191	ENSGT00530000063841.b.a	ENSGT00940000159440	ENSGT00940000165728.c	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000166035
Acanthomorphata	ANCESTRAL SPECIES	11	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Euacanthomorphacea	ANCESTRAL SPECIES	9	ENSGT01030000234542.b.b.a.a.a.b.wb.a.b	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Pinecone sodierfish	MODERN SPECIES	23	KCMF1 (ENSMMDG00005017915)	slc20a2 (ENSMMDG00005017918)	ENSMMDG00005017935	mthfd2l (ENSMMDG00005017937)	ENSMMDG00005017939	ENSMMDG00005017940	ENSMMDG00005017942	ENSMMDG00005017947	ENSMMDG00005017984	gpx8 (ENSMMDG00005017987)	ENSMMDG00005017990	TUT7 (ENSMMDG00005018012)	isca1 (ENSMMDG00005018897)	kiss1rb (ENSMMDG00005018900)	psat1 (ENSMMDG00005018901)	ENSMMDG00005018907 ##22	ENSMMDG00005018916 ##22	mccc2 (ENSMMDG00005018922)	TMEM8B (ENSMMDG00005019408)	tars1 (ENSMMDG00005019561)	gas1a (ENSMMDG00005021965)	ENSMMDG00005021967	ENSMMDG00005021968	ENSMMDG00005021971	ENSMMDG00005021974	ENSMMDG00005004176	ENSMMDG00005004187	cenatac (ENSMMDG00005004196)	ENSMMDG00005004215	naaladl1 (ENSMMDG00005004255)	erap1b (ENSMMDG00005004512)
Percomorphaceae	ANCESTRAL SPECIES	12	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT01090000261062	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Percomorphaceae_B	ANCESTRAL SPECIES	9	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Ovalentaria	ANCESTRAL SPECIES	9	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988
Atherinomorphae	ANCESTRAL SPECIES	7	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Cyprinodontiformes	ANCESTRAL SPECIES	7	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Cyprinodontoidei	ANCESTRAL SPECIES	10	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Poeciliinae	ANCESTRAL SPECIES	7	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Poecilia	ANCESTRAL SPECIES	1	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Guppy	MODERN SPECIES	456	ENSPREG00000012568	lpl (ENSPREG00000012534)	safb (ENSPREG00000012496)	malt2 (ENSPREG00000012440)	mrpl54 (ENSPREG00000012425)	fam32a (ENSPREG00000012381)	fh (ENSPREG00000012363)	ENSPREG00000012355	hdgfl2 (ENSPREG00000012329)	ap3d1 (ENSPREG00000012126)	ENSPREG00000012077	C2CD4C (ENSPREG00000012069)	gna15.4 (ENSPREG00000012057)	gna11a (ENSPREG00000012006)	ENSPREG00000011959 ##22	ENSPREG00000011940 ##22	ENSPREG00000011930 ##22	ENSPREG00000011877 ##22	ENSPREG00000011840 ##22	plpp2b (ENSPREG00000011817)	mier2 (ENSPREG00000011791)	s1pr3a (ENSPREG00000011777) ##18	shdb (ENSPREG00000011761)	ENSPREG00000011613 #26	shc2 (ENSPREG00000011516)	cks2 (ENSPREG00000011487)	odf3l2b (ENSPREG00000011469)	CPAMD8 (ENSPREG00000011302)	ENSPREG00000011256	ENSPREG00000011249	foxe3 (ENSPREG00000011231)
NAME_6	ANCESTRAL SPECIES	61	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a
Sailfin molly	MODERN SPECIES	718	ENSPLAG00000001592	lpl (ENSPLAG00000001604)	safb (ENSPLAG00000001614)	malt2 (ENSPLAG00000001624)	mrpl54 (ENSPLAG00000001633)	mrpl54 (ENSPLAG00000001640)	fam32a (ENSPLAG00000001650)	fh (ENSPLAG00000001654)	hdgfl2 (ENSPLAG00000001664)	ap3d1 (ENSPLAG00000001695)	cdc34a (ENSPLAG00000001716)	C2CD4C (ENSPLAG00000001721)	gna15.4 (ENSPLAG00000001731)	gna11a (ENSPLAG00000001742)	ENSPLAG00000001757 ##22	ENSPLAG00000001772 ##22
Platyfish	MODERN SPECIES	23	ENSXMAG00000003390	ENSXMAG00000003401	lpl (ENSXMAG00000003404)	safb (ENSXMAG00000003458)	malt2 (ENSXMAG00000003477)	mrpl54 (ENSXMAG00000003500)	fam32a (ENSXMAG00000003501)	fh (ENSXMAG00000020382)	hdgfl2 (ENSXMAG00000003505)	ap3d1 (ENSXMAG00000003514)	cdc34a (ENSXMAG00000023383)	C2CD4C (ENSXMAG00000020383)	gna15.4 (ENSXMAG00000013441)	gna11a (ENSXMAG00000029699)	ENSXMAG00000013420 ##22	ENSXMAG00000026963 ##22	ENSXMAG00000022246 ##22	ENSXMAG00000013402 ##22	ENSXMAG00000013381 ##22	plpp2b (ENSXMAG00000013369)	s1pr3a (ENSXMAG00000019945) ##18	shdb (ENSXMAG00000013357)	ENSXMAG00000013329 #26	shc2 (ENSXMAG00000029548)	cks2 (ENSXMAG00000013318)	odf3l2b (ENSXMAG00000029627)	CPAMD8 (ENSXMAG00000013288)	ENSXMAG00000013286	ENSXMAG00000013281	foxe3 (ENSXMAG00000013278)	ENSXMAG00000027316
Oryzias	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Oryzias_a	ANCESTRAL SPECIES	24	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000154706.rb.a	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.s #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270	ENSGT00940000157140.b.a.b.a
Chinese medaka	MODERN SPECIES	1012	RAB8A (ENSOSIG00000011798)	ENSOSIG00000011794	tpm4a (ENSOSIG00000011428)	ENSOSIG00000011414	lpl (ENSOSIG00000011410)	safb (ENSOSIG00000011404)	malt2 (ENSOSIG00000011397)	mrpl54 (ENSOSIG00000011395)	fam32a (ENSOSIG00000011394)	hdgfl2 (ENSOSIG00000011375)	cdc34a (ENSOSIG00000011363)	C2CD4C (ENSOSIG00000011360)	gna15.1 (ENSOSIG00000011357)	gna11a (ENSOSIG00000011302)	ENSOSIG00000011298 ##22	ENSOSIG00000011296 ##22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Pomacentridae	ANCESTRAL SPECIES	14	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Pomacentridae_A	ANCESTRAL SPECIES	48	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b.h ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Spiny chromis	MODERN SPECIES	187	ENSAPOG00000022445	lpl (ENSAPOG00000022490)	safb (ENSAPOG00000022508)	malt2 (ENSAPOG00000022621)	mrpl54 (ENSAPOG00000022643)	fam32a (ENSAPOG00000000646)	fh (ENSAPOG00000022666)	ENSAPOG00000022684	hdgfl2 (ENSAPOG00000022723)	ap3d1 (ENSAPOG00000022902)	cdc34a (ENSAPOG00000022963)	C2CD4C (ENSAPOG00000022972)	gna15.4 (ENSAPOG00000000655)	gna11a (ENSAPOG00000023049)	ENSAPOG00000023095 ##22	ENSAPOG00000023105 ##22
Bicolor damselfish	MODERN SPECIES	1572													gna15.4 (ENSSPAG00000000832)	gna11a (ENSSPAG00000000875)	ENSSPAG00000000906 ##22	ENSSPAG00000000941 ##22
Cichlidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Midas cichlid	MODERN SPECIES	630											fem1c (ENSACIG00000005693)	tmed7 (ENSACIG00000005681)	ENSACIG00000005655	SMAD4 (ENSACIG00000005628)	ENSACIG00000005623	ENSACIG00000005602 ##22	ENSACIG00000005577 ##22	RASEF (ENSACIG00000005549)	ENSACIG00000005532	ENSACIG00000005459	FRMD3 (ENSACIG00000005425)	IDNK (ENSACIG00000005410)	ENSACIG00000005399	gkap1 (ENSACIG00000005379)	ENSACIG00000005370	ENSACIG00000005360	zgc:136564 (ENSACIG00000005341)	hnrnpk (ENSACIG00000005320)	rmi1 (ENSACIG00000005305)	SLC28A3 (ENSACIG00000005103)	ENSACIG00000005078
Percomorphaceae_C	ANCESTRAL SPECIES	8	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Percomorphaceae_D	ANCESTRAL SPECIES	8	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Carangaria	ANCESTRAL SPECIES	7	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT01000000215054	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Pleuronectoidei	ANCESTRAL SPECIES	30	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.d #26	ENSGT01000000215054	ENSGT00940000159237.c #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974
Tongue sole	MODERN SPECIES	11	gadd45ba (ENSCSEG00000000436)	CARTPT (ENSCSEG00000000433)	ENSCSEG00000000432	ENSCSEG00000000429	ENSCSEG00000000415	med8 (ENSCSEG00000000413)	aldh9a1a.1 (ENSCSEG00000000405)	wdr18 (ENSCSEG00000000391)	kif2a (ENSCSEG00000000385)	GFUS (ENSCSEG00000000378)	serpinb1 (ENSCSEG00000000377)	gmds (ENSCSEG00000000366)	ENSCSEG00000000356	exoc2 (ENSCSEG00000000348)	ENSCSEG00000000343 ##22	ENSCSEG00000000341 ##22	ENSCSEG00000000337 ##22	ENSCSEG00000000334	ENSCSEG00000000315 ##22	plpp2b (ENSCSEG00000000309)	mier2 (ENSCSEG00000000306)	s1pr3a (ENSCSEG00000000302) ##18	shdb (ENSCSEG00000000300)	ENSCSEG00000000295	ENSCSEG00000000293 #26	ENSCSEG00000000291 #26	shc2 (ENSCSEG00000000288)	cks2 (ENSCSEG00000000287)	odf3l2b (ENSCSEG00000000285)	ENSCSEG00000000281	ENSCSEG00000000280
Carangaria_A	ANCESTRAL SPECIES	3	ENSGT00940000165061	ENSGT00940000166556	ENSGT00940000157178.h	ENSGT00940000155916	ENSGT00390000018044.b.b	ENSGT00390000001201	ENSGT00390000013811	ENSGT00950000183122.A	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.b ##22	ENSGT01030000234519.e.a.a.b.b.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237 #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000180208	ENSGT00940000162399	ENSGT00940000160988	ENSGT00390000010974	ENSGT00940000162270
Barramundi perch	MODERN SPECIES	43	ENSLCAG00010027074	ENSLCAG00010027078	lpl (ENSLCAG00010027083)	safb (ENSLCAG00010027088)	malt2 (ENSLCAG00010027090)	mrpl54 (ENSLCAG00010027096)	fam32a (ENSLCAG00010027098)	fh (ENSLCAG00010027101)	hdgfl2 (ENSLCAG00010027104)	ap3d1 (ENSLCAG00010027113)	ENSLCAG00010027123	C2CD4C (ENSLCAG00010027131)	gna15.4 (ENSLCAG00010027133)	gna11a (ENSLCAG00010027141)	ENSLCAG00010027150 ##22	ENSLCAG00010027154 ##22	ENSLCAG00010027158 ##22	ENSLCAG00010027161 ##22	ENSLCAG00010027165 ##22	plpp2b (ENSLCAG00010027171)	mier2 (ENSLCAG00010027173)	s1pr3a (ENSLCAG00010027175) ##18	shdb (ENSLCAG00010027177)	shc2 (ENSLCAG00010027181)	ENSLCAG00010027186 #26	ENSLCAG00010027188 #26	cks2 (ENSLCAG00010027190)	odf3l2b (ENSLCAG00010027193)	CPAMD8 (ENSLCAG00010027197)	ENSLCAG00010027209	ENSLCAG00010027212
Eupercaria	ANCESTRAL SPECIES	89															ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Eupecaria_A	ANCESTRAL SPECIES	95															ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Ballan wrasse	MODERN SPECIES	558										CERS1 (ENSLBEG00000014373)	ncln (ENSLBEG00000014415) #17	s1pr4 (ENSLBEG00000014539) #18	MYO9B (ENSLBEG00000014595)	gna11a (ENSLBEG00000014741)	ENSLBEG00000014818 ##22	ENSLBEG00000014855 ##22
Eupecaria_B	ANCESTRAL SPECIES	92															ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Perciformes	ANCESTRAL SPECIES	103															ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Perciformes_a	ANCESTRAL SPECIES	215															ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
Channel bull blenny	MODERN SPECIES	18	ENSCGOG00000003035	lpl (ENSCGOG00000002862)	safb (ENSCGOG00000002844)	malt2 (ENSCGOG00000002753)	mrpl54 (ENSCGOG00000002722)	fam32a (ENSCGOG00000002682)	fh (ENSCGOG00000002673)	ENSCGOG00000002654	ENSCGOG00000002635	ap3d1 (ENSCGOG00000001818)	cdc34a (ENSCGOG00000001731)	C2CD4C (ENSCGOG00000001725)	gna15.4 (ENSCGOG00000001659)	gna11a (ENSCGOG00000001513)	ENSCGOG00000001502 ##22	ENSCGOG00000001501 ##22	ENSCGOG00000001499 ##22	plpp2b (ENSCGOG00000001497)	mier2 (ENSCGOG00000001493)	s1pr3a (ENSCGOG00000001491) ##18	shdb (ENSCGOG00000001487)	ENSCGOG00000001483 #26	ENSCGOG00000001481	shc2 (ENSCGOG00000001480)	cks2 (ENSCGOG00000001476)	odf3l2b (ENSCGOG00000001474)	ENSCGOG00000001470	ENSCGOG00000001469	ENSCGOG00000001466	foxe3 (ENSCGOG00000001463)	FOXD2 (ENSCGOG00000001461)
Protacanthopterygii	ANCESTRAL SPECIES	13	ENSGT00940000154737.c.h	ENSGT00940000160191	ENSGT00530000063841.b.a	ENSGT00940000159440	ENSGT00940000165728.c	ENSGT00940000166572	ENSGT00440000034888	ENSGT00940000157273	ENSGT00940000153942.a.f	ENSGT00550000075067	ENSGT00940000164811.a.a	ENSGT00940000161259.B.a	ENSGT00940000165296	ENSGT00940000162569.b.k.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b ##22	ENSGT00940000155885.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a ##18	ENSGT00940000159004.b	ENSGT00940000159237.a #26	ENSGT01000000215054	ENSGT00940000159237.b #26	ENSGT00950000182870.a.a.a.a	ENSGT00950000182971.B.a.a	ENSGT00940000160480.c.a	ENSGT00940000162399	ENSGT00940000160988
Salmoninae	ANCESTRAL SPECIES	11	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.a ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT01000000219677
Huchen	MODERN SPECIES	1307													ENSHHUG00000049595	gna11a (ENSHHUG00000049601)	ENSHHUG00000049617 ##22	ENSHHUG00000049623 ##22	ENSHHUG00000049628 ##22	ENSHHUG00000049632
Salmoninae_a	ANCESTRAL SPECIES	22	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.a.b.f.e ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00940000159004.b.b	ENSGT00940000159237.a.a #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b
Salmo	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22
River trout	MODERN SPECIES	19							dmrt1 (ENSSTUG00000014046)	FBP2 (ENSSTUG00000014023)	tars1 (ENSSTUG00000013369)	ENSSTUG00000013265	ENSSTUG00000013259	rufy3 (ENSSTUG00000013218)	mapk1 (ENSSTUG00000013149)	ENSSTUG00000013132	stambpb (ENSSTUG00000013100)	ENSSTUG00000013095 ##22	ENSSTUG00000013082 ##22	ENSSTUG00000011956	ENSSTUG00000011853	ENSSTUG00000011850	pias2 (ENSSTUG00000011825)	mtmr12 (ENSSTUG00000011781)	ENSSTUG00000011761	ENSSTUG00000011707	mtmr12 (ENSSTUG00000011694)	zfr (ENSSTUG00000010030)	ENSSTUG00000009940	npr3 (ENSSTUG00000009840)	arid3c (ENSSTUG00000009790)	isca1 (ENSSTUG00000009778)	ENSSTUG00000009746
Oncorhynchus	ANCESTRAL SPECIES	8	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00940000159237.a.a #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000160480.c.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT01000000219677
Rainbow trout	MODERN SPECIES	26	mpnd (ENSOMYG00000030539)	stap2b (ENSOMYG00000030471)	fsd1 (ENSOMYG00000030355)	si:ch211-129c21.1 (ENSOMYG00000030221)	scamp4 (ENSOMYG00000030209)	chaf1a (ENSOMYG00000030140)	ubxn6 (ENSOMYG00000030096)	hdgfl2 (ENSOMYG00000030018)	ap3d1 (ENSOMYG00000029879)	cdc34a (ENSOMYG00000029618)	ENSOMYG00000029566	ENSOMYG00000029558	ENSOMYG00000060898	gna11a (ENSOMYG00000029506)	ENSOMYG00000029400 ##22	ENSOMYG00000029438 ##22	ENSOMYG00000054334 ##22	ENSOMYG00000029345 ##22	plpp2b (ENSOMYG00000029320)	mier2 (ENSOMYG00000029225)	ENSOMYG00000029274	s1pr3a (ENSOMYG00000029085) ##18	shdb (ENSOMYG00000029068)	ENSOMYG00000029036 #26	ENSOMYG00000053015 #26	ENSOMYG00000057044	ENSOMYG00000048887	shc2 (ENSOMYG00000029021)	cks2 (ENSOMYG00000054974)	odf3l2b (ENSOMYG00000028966)	ENSOMYG00000060165
Oncorhynchus_a	ANCESTRAL SPECIES	14	ENSGT00940000154737.c.h.f	ENSGT00940000160191	ENSGT00530000063841.b.a.d	ENSGT00940000159440.b	ENSGT00940000165728.c.b	ENSGT00940000166572.e	ENSGT00440000034888.c	ENSGT00940000157273.o	ENSGT00940000153942.a.f.gb	ENSGT00550000075067.h	ENSGT00940000164811.a.a.b	ENSGT00940000161259.B.a.b	ENSGT00940000165296.g	ENSGT00940000162569.b.k.a.a	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b.h.a.d ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.b.a.a.b.b ##22	ENSGT00940000155885.b.m	ENSGT01030000234573.A.b.b.a.c	ENSGT00940000153731.b	ENSGT01050000244887.A.b.a.f ##18	ENSGT00940000159004.b.a.a	ENSGT00940000159237.a.b #26	ENSGT00940000159237.a.a #26	ENSGT00950000182870.a.a.a.a.m	ENSGT00950000182971.B.a.a.f	ENSGT00940000162399.p.b	ENSGT00940000160988	ENSGT00940000156569.a.b.b.f	ENSGT00390000008279.b.c
Chinook salmon	MODERN SPECIES		rorca (ENSOTSG00005000177)	sh3gl1b (ENSOTSG00005000156)	mpnd (ENSOTSG00005000152)	ENSOTSG00005000148	fsd1 (ENSOTSG00005000137)	si:ch211-129c21.1 (ENSOTSG00005005398)	scamp4 (ENSOTSG00005005397)	chaf1a (ENSOTSG00005005309)	ubxn6 (ENSOTSG00005005294)	hdgfl2 (ENSOTSG00005005286)	ap3d1 (ENSOTSG00005005234)	cdc34a (ENSOTSG00005005218)	C2CD4C (ENSOTSG00005005214)	ENSOTSG00005005210	gna11a (ENSOTSG00005004979)	ENSOTSG00005004977 ##22	ENSOTSG00005004956 ##22	ENSOTSG00005004941 ##22	plpp2b (ENSOTSG00005004937)	ENSOTSG00005004934	mier2 (ENSOTSG00005004931)	s1pr3a (ENSOTSG00005004929) ##18	shdb (ENSOTSG00005004927)	ENSOTSG00005004922	ENSOTSG00005004920	shc2 (ENSOTSG00005004919)	cks2 (ENSOTSG00005004917)	odf3l2b (ENSOTSG00005004916)	CPAMD8 (ENSOTSG00005004914)	ENSOTSG00005004911	rex1bd (ENSOTSG00005004908)
Coho salmon	MODERN SPECIES	4	mpnd (ENSOKIG00005037686)	stap2b (ENSOKIG00005037788)	fsd1 (ENSOKIG00005037830)	si:ch211-129c21.1 (ENSOKIG00005038016)	scamp4 (ENSOKIG00005038188)	chaf1a (ENSOKIG00005038259)	ubxn6 (ENSOKIG00005038315)	hdgfl2 (ENSOKIG00005038376)	ap3d1 (ENSOKIG00005038444)	cdc34a (ENSOKIG00005038988)	ENSOKIG00005039022	C2CD4C (ENSOKIG00005039032)	ENSOKIG00005039050	gna11a (ENSOKIG00005039080)	ENSOKIG00005039228 ##22	ENSOKIG00005039288 ##22	ENSOKIG00005039302 ##22	ENSOKIG00005039330 ##22	plpp2b (ENSOKIG00005039353)	mier2 (ENSOKIG00005039390)	ENSOKIG00005039559	s1pr3a (ENSOKIG00005039568) ##18	shdb (ENSOKIG00005039582)	ENSOKIG00005039592 #26	ENSOKIG00005039631 #26	shc2 (ENSOKIG00005039647)	ENSOKIG00005039686	cks2 (ENSOKIG00005039691)	CPAMD8 (ENSOKIG00005039733)	ENSOKIG00005039845	crlf1b (ENSOKIG00005039856)
Sarcopterygii	ANCESTRAL SPECIES	66												ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT00390000014361	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162161.A	ENSGT00940000160580
Tetrapoda	ANCESTRAL SPECIES	55					ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00960000189417	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113
Amniota	ANCESTRAL SPECIES	23	ENSGT00940000163061	ENSGT01010000222912	ENSGT01090000261062	ENSGT00940000155916	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Mammalia	ANCESTRAL SPECIES	39	ENSGT00940000165052	ENSGT00940000162475	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00940000161827	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000161188.c.b	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000162161.A	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Theria	ANCESTRAL SPECIES	31	ENSGT00390000012482	ENSGT00940000159489	ENSGT00390000015797.c.a	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000162161.A	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00950000182904.a.b.b	ENSGT00390000012482	ENSGT00940000159489	ENSGT00390000015797.c.a	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000164119	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000162161.A	ENSGT00940000159142	ENSGT00940000156523.b
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00950000182904.a.b.b	ENSGT00390000012482.b	ENSGT00940000159489	ENSGT00390000015797.c.a.i	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00390000008060	ENSGT00940000161721
Diprotodontia	ANCESTRAL SPECIES	54	ENSGT00950000182904.a.b.b	ENSGT00390000012482.b	ENSGT00940000159489	ENSGT00390000015797.c.a.i	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113.g
Diprotodontia_a	ANCESTRAL SPECIES	53	ENSGT00950000182904.a.b.b	ENSGT00390000012482.b	ENSGT00940000159489	ENSGT00390000015797.c.a.i	ENSGT00940000161827	ENSGT00940000163613	ENSGT00940000159134	ENSGT00940000160489	ENSGT00940000160221	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113.g
Common wonbat	MODERN SPECIES	626	KCNN1 (ENSVURG00010014819)	CCDC124 (ENSVURG00010014813)	SLC5A5 (ENSVURG00010014802)	ENSVURG00010014755	JAK3 (ENSVURG00010014721)	ENSVURG00010014710	B3GNT3 (ENSVURG00010014702)	FCHO1 (ENSVURG00010014674)	MAP1S (ENSVURG00010014460)	CELF5 (ENSVURG00010014264) #16	NCLN (ENSVURG00010014249) #17	S1PR4 (ENSVURG00010014236) #18	GNA15 (ENSVURG00010014228) #19	GNA11 (ENSVURG00010014220) #20	ENSVURG00010014214 ##22	ENSVURG00010014208 ##22
koala	MODERN SPECIES	133	ENSPCIG00000031020	SLC5A5 (ENSPCIG00000027171)	ENSPCIG00000027151	ENSPCIG00000027147	JAK3 (ENSPCIG00000027139)	ENSPCIG00000027134	B3GNT3 (ENSPCIG00000033076)	FCHO1 (ENSPCIG00000027129)	MAP1S (ENSPCIG00000027127)	CELF5 (ENSPCIG00000027126) #16	NCLN (ENSPCIG00000027124) #17	S1PR4 (ENSPCIG00000027123) #18	GNA15 (ENSPCIG00000027122) #19	GNA11 (ENSPCIG00000034212) #20	ENSPCIG00000022239 ##22	ENSPCIG00000035480 ##22	ENSPCIG00000033729	ENSPCIG00000022225 ##22	PLPP2 (ENSPCIG00000022219)	MIER2 (ENSPCIG00000022207)	ENSPCIG00000009623	C2CD4C (ENSPCIG00000036252)	ENSPCIG00000009621	ODF3L2 (ENSPCIG00000031263)	ENSPCIG00000006069	ENSPCIG00000006071	TPGS1 (ENSPCIG00000006072)	CDC34 (ENSPCIG00000006074)	BSG (ENSPCIG00000006097)	ENSPCIG00000006101	ENSPCIG00000006103
Tasmanian devil	MODERN SPECIES		KCNN1 (ENSSHAG00000006692)	CCDC124 (ENSSHAG00000021571)	SLC5A5 (ENSSHAG00000000675)	ENSSHAG00000022561	JAK3 (ENSSHAG00000004978)	ENSSHAG00000022068	B3GNT3 (ENSSHAG00000003539)	ENSSHAG00000002099	ENSSHAG00000008823 #16	NCLN (ENSSHAG00000007494) #17	S1PR4 (ENSSHAG00000007216) #18	ENSSHAG00000027184 #19	ENSSHAG00000021365 #19	ENSSHAG00000006119 #20	ENSSHAG00000004602 ##22	ENSSHAG00000025822 ##22	ENSSHAG00000022567 ##22	ENSSHAG00000003187 ##22	ENSSHAG00000022969 ##22	ENSSHAG00000000085	MIER2 (ENSSHAG00000001062)	ENSSHAG00000027359	ENSSHAG00000011908	C2CD4C (ENSSHAG00000026956)	ENSSHAG00000023520	ODF3L2 (ENSSHAG00000011299)	ENSSHAG00000011038	TPGS1 (ENSSHAG00000024988)	CDC34 (ENSSHAG00000026543)	ENSSHAG00000020581	BSG (ENSSHAG00000010030)
Opossum	MODERN SPECIES	483																ENSMODG00000000281 ##22	ENSMODG00000036595 ##22	ENSMODG00000044776 ##22
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a	ENSGT00940000159489
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00940000161332	ENSGT00940000157113.g	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a.i	ENSGT00940000159489
Tasmanian devil	MODERN SPECIES		FGF22 (ENSSHAG00000028711)	POLRMT (ENSSHAG00000009387)	ENSSHAG00000031962	BSG (ENSSHAG00000010030)	ENSSHAG00000020581	CDC34 (ENSSHAG00000026543)	TPGS1 (ENSSHAG00000024988)	ENSSHAG00000011038	ODF3L2 (ENSSHAG00000011299)	ENSSHAG00000023520	C2CD4C (ENSSHAG00000026956)	ENSSHAG00000011908	ENSSHAG00000027359	MIER2 (ENSSHAG00000001062)	ENSSHAG00000000085	ENSSHAG00000022969 ##22	ENSSHAG00000003187 ##22	ENSSHAG00000022567 ##22	ENSSHAG00000025822 ##22	ENSSHAG00000004602 ##22	ENSSHAG00000006119 #20	ENSSHAG00000021365 #19	ENSSHAG00000027184 #19	S1PR4 (ENSSHAG00000007216) #18	NCLN (ENSSHAG00000007494) #17	ENSSHAG00000008823 #16	ENSSHAG00000002099	B3GNT3 (ENSSHAG00000003539)	ENSSHAG00000022068	JAK3 (ENSSHAG00000004978)	ENSSHAG00000022561
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000163061.a.a	ENSGT01090000261062	ENSGT00940000155916	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Lepidosauria	ANCESTRAL SPECIES	33	ENSGT00940000153617.A.b	ENSGT00940000163061.a.a	ENSGT01010000222912	ENSGT01090000261062	ENSGT00940000155916	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Episquamata	ANCESTRAL SPECIES	18	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.b	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050
Laterata	ANCESTRAL SPECIES	57										ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.b	ENSGT01030000234551.j.b.a.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050
Argentine black and white tegu	MODERN SPECIES	109	GNA15 (ENSSMRG00000017742) #19	ENSSMRG00000017736	ENSSMRG00000017730	S1PR4 (ENSSMRG00000017729) #18	BSG (ENSSMRG00000017728)	CELF5 (ENSSMRG00000017696) #16	NCLN (ENSSMRG00000017695) #17	CREB3L3 (ENSSMRG00000017694)	FSD1 (ENSSMRG00000017693)	STAP2 (ENSSMRG00000017692)	MPND (ENSSMRG00000017691)	SH3GL1 (ENSSMRG00000017688)	CHAF1A (ENSSMRG00000017687)	UBXN6 (ENSSMRG00000017685)	ENSSMRG00000017683 ##22	ENSSMRG00000017678 ##22	ENSSMRG00000017675 ##22	PLPP2 (ENSSMRG00000017674)	MIER2 (ENSSMRG00000017673)	C2CD4C (ENSSMRG00000017672)	ENSSMRG00000017671	ODF3L2 (ENSSMRG00000017670)	ENSSMRG00000017667	TPGS1 (ENSSMRG00000017666)	CDC34 (ENSSMRG00000017665)	MICOS13 (ENSSMRG00000017664)	ENSSMRG00000017662	ENSSMRG00000017649	ENSSMRG00000017648	ENSSMRG00000017647	ENSSMRG00000017646
Common wall lizard	MODERN SPECIES	9	ENSPMRG00000022701	SSBP4 (ENSPMRG00000022706)	ISYNA1 (ENSPMRG00000022714)	ELL (ENSPMRG00000022721)	MRPL34 (ENSPMRG00000022728)	DDA1 (ENSPMRG00000022730)	ANO8 (ENSPMRG00000022737)	GTPBP3 (ENSPMRG00000022752)	ENSPMRG00000022755	GNA15 (ENSPMRG00000022760) #19	GNA11 (ENSPMRG00000022765) #20	ENSPMRG00000022772	ENSPMRG00000022776	ENSPMRG00000022783	ENSPMRG00000022785	ENSPMRG00000022798 ##22	ENSPMRG00000022820 ##22	MIER2 (ENSPMRG00000022832)	C2CD4C (ENSPMRG00000022838)	ENSPMRG00000022839	ODF3L2 (ENSPMRG00000022846)	ENSPMRG00000022849	TPGS1 (ENSPMRG00000019869)	CDC34 (ENSPMRG00000019871)	ENSPMRG00000019880	ENSPMRG00000019886	POLRMT (ENSPMRG00000019892)	ENSPMRG00000019903	SBNO2 (ENSPMRG00000019908)	STK11 (ENSPMRG00000019933)	ENSPMRG00000019944
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000159248	ENSGT00940000153617.A.b	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050	ENSGT00390000009230
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000159248	ENSGT00940000153617.A.b.b	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736.a #19	ENSGT00940000161736.b #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050	ENSGT00390000009230
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.b	ENSGT01010000225861	ENSGT00940000161736.a #19	ENSGT00940000161736.b #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a.m ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00960000189417	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000170739	ENSGT00940000159946	ENSGT00940000158050
Blue-lipped sea krait	MODERN SPECIES	3659																ENSLLTG00000001640 ##22
Acanthophiinae	ANCESTRAL SPECIES	9					ENSGT00940000163061.a.a.b	ENSGT01010000222912	ENSGT00940000155916.e	ENSGT00940000155916.f	ENSGT00390000002629	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT00940000161736.b #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a.m ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000159946	ENSGT00940000158050	ENSGT00390000009230	ENSGT00940000153524.a
Eastern brown snake	DUPLICATION
Eastern brown snake	MODERN SPECIES	10						ENSPTXG00000000715	ENSPTXG00000000713	SAFB (ENSPTXG00000000696)	ENSPTXG00000000650 #16	NCLN (ENSPTXG00000000643) #17	S1PR4 (ENSPTXG00000000636) #18	GNA11 (ENSPTXG00000000632) #20	ENSPTXG00000000629	ENSPTXG00000000625 ##22	ENSPTXG00000000622 ##22	ENSPTXG00000000618 ##22	ENSPTXG00000000556 ##22	PLPP2 (ENSPTXG00000000527)	MIER2 (ENSPTXG00000000478)	C2CD4C (ENSPTXG00000000452)	ENSPTXG00000000407	ODF3L2 (ENSPTXG00000000378)	TPGS1 (ENSPTXG00000000368)	CDC34 (ENSPTXG00000000358)	BSG (ENSPTXG00000000335)	ENSPTXG00000000325	POLRMT (ENSPTXG00000000299)	SBNO2 (ENSPTXG00000000275)	STK11 (ENSPTXG00000000255)	CBARP (ENSPTXG00000000136)	CIRBP (ENSPTXG00000000076)
Eastern brown snake	MODERN SPECIES	10							ENSPTXG00000000715	ENSPTXG00000000713	SAFB (ENSPTXG00000000696)	ENSPTXG00000000650 #16	NCLN (ENSPTXG00000000643) #17	S1PR4 (ENSPTXG00000000636) #18	GNA11 (ENSPTXG00000000632) #20	ENSPTXG00000000629	ENSPTXG00000000625 ##22	ENSPTXG00000000622 ##22	ENSPTXG00000000618 ##22	ENSPTXG00000000556 ##22	PLPP2 (ENSPTXG00000000527)	MIER2 (ENSPTXG00000000478)	C2CD4C (ENSPTXG00000000452)	ENSPTXG00000000407	ODF3L2 (ENSPTXG00000000378)	TPGS1 (ENSPTXG00000000368)	CDC34 (ENSPTXG00000000358)	BSG (ENSPTXG00000000335)	ENSPTXG00000000325	POLRMT (ENSPTXG00000000299)	SBNO2 (ENSPTXG00000000275)	STK11 (ENSPTXG00000000255)	CBARP (ENSPTXG00000000136)
Mainland tiger snake	MODERN SPECIES	1953																ENSNSUG00000001407 ##22
Indian cobra	MODERN SPECIES		SHD (ENSNNAG00000002229)	DPP9 (ENSNNAG00000001991)	ARRDC5 (ENSNNAG00000001935)	UHRF1 (ENSNNAG00000001798)	KDM4B (ENSNNAG00000001688)	PTPRS (ENSNNAG00000000956)	ENSNNAG00000000816	ENSNNAG00000000757	NCLN (ENSNNAG00000000724) #17	S1PR4 (ENSNNAG00000000717) #18	ENSNNAG00000000703 #19	ENSNNAG00000000695 #19	GNA11 (ENSNNAG00000000685) #20	ENSNNAG00000000672 ##22	TLE5 (ENSNNAG00000000665) #21	ENSNNAG00000000645 ##22	PLPP2 (ENSNNAG00000000631)	MIER2 (ENSNNAG00000000612)	ENSNNAG00000000590	TPGS1 (ENSNNAG00000000579)	CDC34 (ENSNNAG00000000566)	BSG (ENSNNAG00000000544)	ENSNNAG00000000523	ENSNNAG00000000489	ENSNNAG00000000474	SBNO2 (ENSNNAG00000000450)	STK11 (ENSNNAG00000000419)	ENSNNAG00000000300	CIRBP (ENSNNAG00000002337)	MIDN (ENSNNAG00000002329)	ATP5F1D (ENSNNAG00000002323)
tuatara	MODERN SPECIES	1127	ENSSPUG00000010032	KDM4B (ENSSPUG00000009943)	PTPRS (ENSSPUG00000009885)	ENSSPUG00000009844	ENSSPUG00000009820	ENSSPUG00000009747	MICOS13 (ENSSPUG00000009724)	HSD11B1L (ENSSPUG00000009709)	CELF5 (ENSSPUG00000009687) #16	NCLN (ENSSPUG00000009665) #17	S1PR4 (ENSSPUG00000009653) #18	ENSSPUG00000009643	GNA15 (ENSSPUG00000009627) #19	GNA11 (ENSSPUG00000009599) #20	ENSSPUG00000009560 ##22	ENSSPUG00000009539 ##22	ENSSPUG00000009517 ##22	ENSSPUG00000009464 ##22	MIER2 (ENSSPUG00000009426)	C2CD4C (ENSSPUG00000009416)	ENSSPUG00000009380	ODF3L2 (ENSSPUG00000009362)	ENSSPUG00000009338	TPGS1 (ENSSPUG00000009325)	CDC34 (ENSSPUG00000009314)	BSG (ENSSPUG00000009303)	HCN2 (ENSSPUG00000009220)	ENSSPUG00000009181	ENSSPUG00000009159	FGF22 (ENSSPUG00000009145)	RNF126 (ENSSPUG00000009136)
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Chinese turtle	MODERN SPECIES	693								ENSPSIG00000005170	CELF5 (ENSPSIG00000005317) #16	NCLN (ENSPSIG00000007512) #17	S1PR4 (ENSPSIG00000000376) #18	ENSPSIG00000011914	ENSPSIG00000013339	GNA15 (ENSPSIG00000013394) #19	GNA11 (ENSPSIG00000014324) #20	ENSPSIG00000005358 ##22
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Goode s thornscrub tortoise	MODERN SPECIES	14	ENSGEVG00005005399	MICOS13 (ENSGEVG00005005371)	HSD11B1L (ENSGEVG00005005332)	ENSGEVG00005005303	ENSGEVG00005005291	CELF5 (ENSGEVG00005005212) #16	ENSGEVG00005005181	NCLN (ENSGEVG00005005117) #17	S1PR4 (ENSGEVG00005005079) #18	ENSGEVG00005005031	ENSGEVG00005004996	ENSGEVG00005004980	GNA15 (ENSGEVG00005004969) #19	GNA11 (ENSGEVG00005004947) #20	ENSGEVG00005004928 ##22	ENSGEVG00005004854 ##22	ENSGEVG00005004785 ##22	PLPP2 (ENSGEVG00005004755)	MIER2 (ENSGEVG00005004722)	ENSGEVG00005004678	C2CD4C (ENSGEVG00005004654)	ENSGEVG00005004612	ODF3L2 (ENSGEVG00005004556)	ENSGEVG00005004508	ENSGEVG00005004447	TPGS1 (ENSGEVG00005004421)	CDC34 (ENSGEVG00005004403)	ENSGEVG00005004369	BSG (ENSGEVG00005004347)	HCN2 (ENSGEVG00005004303)	POLRMT (ENSGEVG00005004253)
Abingdon island giant tortoise	MODERN SPECIES		ENSCABG00000002535	ENSCABG00000003198	MICOS13 (ENSCABG00000003199)	HSD11B1L (ENSCABG00000003200)	ENSCABG00000003201	ENSCABG00000003202	ENSCABG00000003203 #16	NCLN (ENSCABG00000003204) #17	S1PR4 (ENSCABG00000003205) #18	ENSCABG00000003206	ENSCABG00000003207	ENSCABG00000003208	GNA15 (ENSCABG00000003209) #19	GNA11 (ENSCABG00000003212) #20	ENSCABG00000003216 ##22	ENSCABG00000003252 ##22	ENSCABG00000003262 ##22	ENSCABG00000003264 ##22	PLPP2 (ENSCABG00000003266)	MIER2 (ENSCABG00000003269)	ENSCABG00000003271	C2CD4C (ENSCABG00000003274)	ENSCABG00000003276	ODF3L2 (ENSCABG00000003286)	ENSCABG00000003288	ENSCABG00000003293	TPGS1 (ENSCABG00000003296)	CDC34 (ENSCABG00000003300)	BSG (ENSCABG00000003303)	HCN2 (ENSCABG00000003308)	POLRMT (ENSCABG00000003346)
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000155916.h.a	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01030000234551.j.b.a.b	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000153731.b	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000164530	ENSGT00960000189417	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721
Three-toed box turtle	MODERN SPECIES	92	ENSTMTG00000003370	ENSTMTG00000003291	ENSTMTG00000003244	ENSTMTG00000003086	HSD11B1L (ENSTMTG00000003049)	ENSTMTG00000003043	ENSTMTG00000003035	CELF5 (ENSTMTG00000009243) #16	NCLN (ENSTMTG00000009205) #17	ENSTMTG00000009163	ENSTMTG00000009150	ENSTMTG00000009138	GNA15 (ENSTMTG00000009022) #19	GNA11 (ENSTMTG00000008985) #20	ENSTMTG00000008968 ##22	ENSTMTG00000008948 ##22	ENSTMTG00000008928 ##22	ENSTMTG00000008912	MIER2 (ENSTMTG00000008896)	ENSTMTG00000008874	ENSTMTG00000008855	ENSTMTG00000008829	ODF3L2 (ENSTMTG00000008794)	ENSTMTG00000008771	ENSTMTG00000008752	TPGS1 (ENSTMTG00000008742)	CDC34 (ENSTMTG00000008730)	ENSTMTG00000008706	ENSTMTG00000008687	HCN2 (ENSTMTG00000008633)	POLRMT (ENSTMTG00000008532)
painted turtle	DUPLICATION
painted turtle	MODERN SPECIES	712	ENSCPBG00000010928	ENSCPBG00000010921	MICOS13 (ENSCPBG00000010918)	ENSCPBG00000010915	ENSCPBG00000010912	ENSCPBG00000010910	CELF5 (ENSCPBG00000010903) #16	ENSCPBG00000010898	NCLN (ENSCPBG00000010884) #17	ENSCPBG00000010880	ENSCPBG00000010874	ENSCPBG00000010868	GNA15 (ENSCPBG00000010851) #19	GNA11 (ENSCPBG00000010843) #20	ENSCPBG00000010838 ##22	ENSCPBG00000010822 ##22	ENSCPBG00000010809 ##22	ENSCPBG00000010802 ##22	PLPP2 (ENSCPBG00000010793)	ENSCPBG00000010780	MIER2 (ENSCPBG00000010767)	ENSCPBG00000010762	C2CD4C (ENSCPBG00000010755)	ENSCPBG00000010743	ODF3L2 (ENSCPBG00000010739)	ENSCPBG00000010734	ARVCF (ENSCPBG00000010719)	COMT (ENSCPBG00000010707)	TXNRD2 (ENSCPBG00000010687)	GNB1L (ENSCPBG00000010679)	TBX1 (ENSCPBG00000010673)
painted turtle	MODERN SPECIES	712	SEPTIN5 (ENSCPBG00000010660)	ENSCPBG00000010670	TBX1 (ENSCPBG00000010673)	GNB1L (ENSCPBG00000010679)	TXNRD2 (ENSCPBG00000010687)	COMT (ENSCPBG00000010707)	ARVCF (ENSCPBG00000010719)	ENSCPBG00000010734	ODF3L2 (ENSCPBG00000010739)	ENSCPBG00000010743	C2CD4C (ENSCPBG00000010755)	ENSCPBG00000010762	MIER2 (ENSCPBG00000010767)	ENSCPBG00000010780	PLPP2 (ENSCPBG00000010793)	ENSCPBG00000010802 ##22	ENSCPBG00000010809 ##22	ENSCPBG00000010822 ##22	ENSCPBG00000010838 ##22	GNA11 (ENSCPBG00000010843) #20	GNA15 (ENSCPBG00000010851) #19	ENSCPBG00000010868	ENSCPBG00000010874	ENSCPBG00000010880	NCLN (ENSCPBG00000010884) #17	ENSCPBG00000010898	CELF5 (ENSCPBG00000010903) #16	ENSCPBG00000010910	ENSCPBG00000010912	ENSCPBG00000010915	MICOS13 (ENSCPBG00000010918)
Archosauria	ANCESTRAL SPECIES	16	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00940000165061	ENSGT00390000002629	ENSGT00940000162487	ENSGT00950000183112.b.a.a	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Australian saltwater crocodile	MODERN SPECIES	62	ENSCPRG00005011555	ENSCPRG00005011557	ENSCPRG00005011568	ENSCPRG00005011618	MICOS13 (ENSCPRG00005011634)	HSD11B1L (ENSCPRG00005011641)	ENSCPRG00005011646	CELF5 (ENSCPRG00005011647) #16	ENSCPRG00005011654	NCLN (ENSCPRG00005011700) #17	S1PR4 (ENSCPRG00005011922) #18	ENSCPRG00005011928	GNA15 (ENSCPRG00005011933) #19	GNA11 (ENSCPRG00005011942) #20	ENSCPRG00005011947 ##22	ENSCPRG00005011960 ##22	ENSCPRG00005012053 ##22	ENSCPRG00005012070	PLPP2 (ENSCPRG00005012077)	ENSCPRG00005012081	ENSCPRG00005012118	NFIC (ENSCPRG00005012131) #15	DOHH (ENSCPRG00005012140) #13	ENSCPRG00005012146	FZR1 (ENSCPRG00005012153) #12	TEKTIP1 (ENSCPRG00005012161) #11	ENSCPRG00005012164	MFSD12 (ENSCPRG00005012178) #10	HMG20B (ENSCPRG00005012188) #9	ENSCPRG00005012192 #8	TBXA2R (ENSCPRG00005012195) #7
Aves	ANCESTRAL SPECIES	20			ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
African ostrich	MODERN SPECIES	995				ENSSCUG00000012619	ENSSCUG00000012591	MICOS13 (ENSSCUG00000012589)	ENSSCUG00000012587	CELF5 (ENSSCUG00000012584) #16	NCLN (ENSSCUG00000012578) #17	S1PR4 (ENSSCUG00000012573) #18	ENSSCUG00000012569	ENSSCUG00000012565	GNA15 (ENSSCUG00000018654) #19	GNA11 (ENSSCUG00000018653) #20	ENSSCUG00000018652 ##22	ENSSCUG00000018649 ##22	ENSSCUG00000018645 #22	MIER2 (ENSSCUG00000018643)
Neognathae	ANCESTRAL SPECIES	21				ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Galloanserae	ANCESTRAL SPECIES	20					ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162457
Anatidae	ANCESTRAL SPECIES	59					ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Pink-footed goose	MODERN SPECIES	283			ENSABRG00000003519	ENSABRG00000003556	MICOS13 (ENSABRG00000003593)	HSD11B1L (ENSABRG00000003622)	CELF5 (ENSABRG00000003635) #16	ENSABRG00000003676	ENSABRG00000003686	NCLN (ENSABRG00000003699) #17	S1PR4 (ENSABRG00000003727) #18	ENSABRG00000003735	ENSABRG00000003763	GNA11 (ENSABRG00000003772) #20	ENSABRG00000003792 ##22	ENSABRG00000003810 ##22	ENSABRG00000003850 ##22	PLPP2 (ENSABRG00000004596)	MIER2 (ENSABRG00000004622)	C2CD4C (ENSABRG00000004634)	ENSABRG00000004653	ENSABRG00000004708	ENSABRG00000004736	TPGS1 (ENSABRG00000004739)	CDC34 (ENSABRG00000004747)	BSG (ENSABRG00000004756)	HCN2 (ENSABRG00000004767)	POLRMT (ENSABRG00000004780)	FGF22 (ENSABRG00000004853)	RNF126 (ENSABRG00000004878)	FSTL3 (ENSABRG00000005021)
Duck	DUPLICATION
Duck	MODERN SPECIES	1082																ENSAPLG00000020849 ##22
Duck	MODERN SPECIES	20	ENSAPLG00000026848	ENSAPLG00000024410	FSTL3 (ENSAPLG00000029654)	ENSAPLG00000024489	ENSAPLG00000029258	RNF126 (ENSAPLG00000002542)	POLRMT (ENSAPLG00000003051)	HCN2 (ENSAPLG00000018891)	BSG (ENSAPLG00000011010)	TPGS1 (ENSAPLG00000030022)	ENSAPLG00000020284	ENSAPLG00000016255	ENSAPLG00000022748	PLPP2 (ENSAPLG00000002405)	ENSAPLG00000023429 #22	ENSAPLG00000028560 ##22	ENSAPLG00000029543 ##22	GNA11 (ENSAPLG00000004066) #20	ENSAPLG00000019679	ENSAPLG00000004622	S1PR4 (ENSAPLG00000001591) #18	NCLN (ENSAPLG00000004844) #17	CELF5 (ENSAPLG00000005174) #16	HSD11B1L (ENSAPLG00000005717)	MICOS13 (ENSAPLG00000001598)	ENSAPLG00000005780	ENSAPLG00000006355	ENSAPLG00000020158	ENSAPLG00000019522	MAU2 (ENSAPLG00000002818)	SUGP1 (ENSAPLG00000002500)
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00950000186319	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000155347.b	ENSGT00940000154929.B	ENSGT00950000182916.a.a #15	ENSGT00500000044957 #13	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00940000165115	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00520000060565
Japanese quail	MODERN SPECIES	20	YJU2 (ENSCJPG00005009776)	SHD (ENSCJPG00005009775)	ENSCJPG00005009774	FSD1 (ENSCJPG00005009773)	ENSCJPG00005009767	ENSCJPG00005009765	MICOS13 (ENSCJPG00005009764)	HSD11B1L (ENSCJPG00005009762)	CELF5 (ENSCJPG00005009760) #16	ENSCJPG00005009758	NCLN (ENSCJPG00005009756) #17	S1PR4 (ENSCJPG00005009755) #18	ENSCJPG00005009736	GNA11 (ENSCJPG00005009735) #20	ENSCJPG00005009732 ##22	ENSCJPG00005009720 ##22	ENSCJPG00005009719	ENSCJPG00005009718 ##22	PLPP2 (ENSCJPG00005009717)	ENSCJPG00005009716	ENSCJPG00005006208	NFIC (ENSCJPG00005006181) #15	ENSCJPG00005006177	ENSCJPG00005006176	FZR1 (ENSCJPG00005006175) #12	ENSCJPG00005006174	MFSD12 (ENSCJPG00005006173) #10	HMG20B (ENSCJPG00005006172) #9	GIPC3 (ENSCJPG00005006171) #8	TBXA2R (ENSCJPG00005006170) #7	ENSCJPG00005006165
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00940000159004	ENSGT00940000159440	ENSGT00530000063841.b	ENSGT00940000160191	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT00940000155347.b	ENSGT00940000154929.B	ENSGT00950000182916.a.a #15	ENSGT00500000044957 #13	ENSGT00940000163250.C	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00940000165115	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7	ENSGT00520000060565
Chicken	MODERN SPECIES	20	FSD1 (ENSGALG00010028415)	ENSGALG00010027189	MPND (ENSGALG00010027184)	ENSGALG00010027176	SAFB (ENSGALG00010027163)	C19orf70 (ENSGALG00010027151)	HSD11B1L (ENSGALG00010027139)	CELF5 (ENSGALG00010027133) #16	ENSGALG00010027132	NCLN (ENSGALG00010027129) #17	S1PR4 (ENSGALG00010027127) #18	ENSGALG00010027126	ENSGALG00010028733	GNA11 (ENSGALG00010027099) #20	ENSGALG00010027173 ##22	ENSGALG00010027170 ##22	ENSGALG00010027165 ##22	PLPP2 (ENSGALG00010027154)	ENSGALG00010027144	ENSGALG00010027120	ENSGALG00010028192	NFIC (ENSGALG00010028165) #15	DOHH (ENSGALG00010028156) #13	ENSGALG00010028154	FZR1 (ENSGALG00010028139) #12	TEKTIP1 (ENSGALG00010028135) #11	ENSGALG00010028133	MFSD12 (ENSGALG00010028127) #10	HMG20B (ENSGALG00010028125) #9	GIPC3 (ENSGALG00010028614) #8	TBXA2R (ENSGALG00010028120) #7
Turkey	MODERN SPECIES	23	ENSMGAG00000002267	ENSMGAG00000022352	YJU2 (ENSMGAG00000009387)	SHD (ENSMGAG00000018362)	FSD1 (ENSMGAG00000008264)	ENSMGAG00000019987	ENSMGAG00000001149	ENSMGAG00000001156	CELF5 (ENSMGAG00000001169) #16	NCLN (ENSMGAG00000001222) #17	S1PR4 (ENSMGAG00000020349) #18	ENSMGAG00000017983	ENSMGAG00000020928	GNA11 (ENSMGAG00000011971) #20	ENSMGAG00000018357 ##22	ENSMGAG00000020401 ##22	ENSMGAG00000010080	ENSMGAG00000007708	ENSMGAG00000009189	ENSMGAG00000022151 ##15	DOHH (ENSMGAG00000001468) #13	ENSMGAG00000001467	FZR1 (ENSMGAG00000001395) #12	TEKTIP1 (ENSMGAG00000018114) #11	ENSMGAG00000001386	MFSD12 (ENSMGAG00000001371) #10	HMG20B (ENSMGAG00000001362) #9	GIPC3 (ENSMGAG00000018477) #8	TBXA2R (ENSMGAG00000015732) #7	ENSMGAG00000001353	PIP5K1C (ENSMGAG00000001308)
Neognathae_b	ANCESTRAL SPECIES	22				ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Neognathae_c	ANCESTRAL SPECIES	24				ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000166509	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Golden eagle	MODERN SPECIES	3				ENSACCG00020002292	ENSACCG00020002339	MICOS13 (ENSACCG00020002390)	HSD11B1L (ENSACCG00020002406)	CELF5 (ENSACCG00020002430) #16	ENSACCG00020002447	NCLN (ENSACCG00020002467) #17	S1PR4 (ENSACCG00020002496) #18	ENSACCG00020002505	ENSACCG00020002524	GNA11 (ENSACCG00020002535) #20	ENSACCG00020002548 ##22	ENSACCG00020002574 ##22	ENSACCG00020002654 ##22	PLPP2 (ENSACCG00020002678)	MIER2 (ENSACCG00020002716)	C2CD4C (ENSACCG00020002736)	ENSACCG00020002839	ENSACCG00020002940	ENSACCG00020002971	TPGS1 (ENSACCG00020002991)	CDC34 (ENSACCG00020003003)	BSG (ENSACCG00020003075)	HCN2 (ENSACCG00020003134)	POLRMT (ENSACCG00020003196)	FGF22 (ENSACCG00020003248)	RNF126 (ENSACCG00020003271)	FSTL3 (ENSACCG00020003291)
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Great tit	MODERN SPECIES	21	TMEM38A (ENSPMJG00000010867)	SMIM7 (ENSPMJG00000010869)	MED26 (ENSPMJG00000010871)	SLC35E1 (ENSPMJG00000010872)	ENSPMJG00000010873	ENSPMJG00000010874	MICOS13 (ENSPMJG00000010875)	ENSPMJG00000010887	CELF5 (ENSPMJG00000010888) #16	NCLN (ENSPMJG00000010889) #17	S1PR4 (ENSPMJG00000010890) #18	ENSPMJG00000010891	ENSPMJG00000010892	GNA11 (ENSPMJG00000010893) #20	ENSPMJG00000010895 ##22	ENSPMJG00000010901 ##22	ENSPMJG00000010998 ##22	PLPP2 (ENSPMJG00000011001)	MIER2 (ENSPMJG00000011002)	C2CD4C (ENSPMJG00000011004)	ENSPMJG00000011005	ENSPMJG00000011011	ENSPMJG00000011016	CDC34 (ENSPMJG00000011017)	ENSPMJG00000011022	BSG (ENSPMJG00000011027)	HCN2 (ENSPMJG00000011030)	POLRMT (ENSPMJG00000011033)	FGF22 (ENSPMJG00000011038)	RNF126 (ENSPMJG00000011040)	FSTL3 (ENSPMJG00000011042)
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00940000161259.B	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162457
Medium ground finch	MODERN SPECIES	194	TMEM38A (ENSGFOG00000005982)	SMIM7 (ENSGFOG00000005990)	MED26 (ENSGFOG00000005994)	SLC35E1 (ENSGFOG00000006003)	ENSGFOG00000006021	ENSGFOG00000006037	MICOS13 (ENSGFOG00000006055)	HSD11B1L (ENSGFOG00000006061)	CELF5 (ENSGFOG00000006068) #16	ENSGFOG00000006073	NCLN (ENSGFOG00000006078) #17	S1PR4 (ENSGFOG00000006094) #18	ENSGFOG00000006115	GNA11 (ENSGFOG00000006146) #20	ENSGFOG00000006165 ##22	ENSGFOG00000006181 ##22	ENSGFOG00000006195 ##22	PLPP2 (ENSGFOG00000006208)	MIER2 (ENSGFOG00000006236)	ENSGFOG00000006248	ENSGFOG00000006266	ENSGFOG00000006287	CDC34 (ENSGFOG00000006299)	BSG (ENSGFOG00000006308)	HCN2 (ENSGFOG00000006322)	POLRMT (ENSGFOG00000006350)	FGF22 (ENSGFOG00000006374)	RNF126 (ENSGFOG00000006391)	FSTL3 (ENSGFOG00000006398)	PALM (ENSGFOG00000006406)	ENSGFOG00000006422
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00390000018845.f	ENSGT00390000014626	ENSGT00390000000259	ENSGT00940000159007	ENSGT00940000155916.g	ENSGT00940000155916.h	ENSGT00390000002629	ENSGT00940000162487	ENSGT00940000154201.a.a.b.d #16	ENSGT00500000044945.a #17	ENSGT01050000244887.B #18	ENSGT01030000234551.j.b.b	ENSGT01030000234551.j.a	ENSGT00940000161033 #20	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00940000155885	ENSGT01030000234573.A.b.b.a	ENSGT00950000182870.a.a.a.a	ENSGT00940000164530	ENSGT00510000049549	ENSGT00500000045074	ENSGT00940000160356	ENSGT00940000159142	ENSGT00940000156523.b	ENSGT00390000008060	ENSGT00940000161721	ENSGT00940000157113	ENSGT00940000161332	ENSGT00940000162457
Common canary	MODERN SPECIES	44	MED26 (ENSSCAG00000003956)	SLC35E1 (ENSSCAG00000003963)	ENSSCAG00000003979	ENSSCAG00000003995	ENSSCAG00000004187	ENSSCAG00000005346	ENSSCAG00000005350	ENSSCAG00000005353 ##16	CELF5 (ENSSCAG00000005358) #16	NCLN (ENSSCAG00000005389) #17	S1PR4 (ENSSCAG00000005525) #18	ENSSCAG00000005529	ENSSCAG00000005531	GNA11 (ENSSCAG00000005541) #20	ENSSCAG00000005555 ##22	ENSSCAG00000005560 ##22	ENSSCAG00000005609 ##22	PLPP2 (ENSSCAG00000005614)	MIER2 (ENSSCAG00000005618)	ENSSCAG00000005633	ENSSCAG00000005662	ENSSCAG00000005672	CDC34 (ENSSCAG00000005678)	BSG (ENSSCAG00000005681)	HCN2 (ENSSCAG00000005715)	POLRMT (ENSSCAG00000005816)	FGF22 (ENSSCAG00000005822)	RNF126 (ENSSCAG00000005824)	FSTL3 (ENSSCAG00000005827)	PRSS57 (ENSSCAG00000005829)	ENSSCAG00000005835
Zebra finch	DUPLICATION
Zebra finch	MODERN SPECIES	21	ENSTGUG00000000482	MED26 (ENSTGUG00000025288)	SLC35E1 (ENSTGUG00000021589)	ENSTGUG00000000489	ENSTGUG00000000502	MICOS13 (ENSTGUG00000000509)	HSD11B1L (ENSTGUG00000000510)	ENSTGUG00000000514	NCLN (ENSTGUG00000000519) #17	S1PR4 (ENSTGUG00000029330) #18	ENSTGUG00000000525	ENSTGUG00000018462	GNA11 (ENSTGUG00000000541) #20	ENSTGUG00000026438 ##22	ENSTGUG00000026945 ##22	ENSTGUG00000000551 ##22	ENSTGUG00000000573 ##22	MIER2 (ENSTGUG00000000596)	ENSTGUG00000000601	ENSTGUG00000000605	ENSTGUG00000019805	TPGS1 (ENSTGUG00000029200)	CDC34 (ENSTGUG00000000612)	BSG (ENSTGUG00000000614)	HCN2 (ENSTGUG00000000617)	POLRMT (ENSTGUG00000000621)	FGF22 (ENSTGUG00000000627)	RNF126 (ENSTGUG00000000628)	FSTL3 (ENSTGUG00000029467)	PRSS57 (ENSTGUG00000000638)	PALM (ENSTGUG00000021295)
Zebra finch	MODERN SPECIES	21	TMEM38A (ENSTGUG00000000480)	ENSTGUG00000000482	MED26 (ENSTGUG00000025288)	SLC35E1 (ENSTGUG00000021589)	ENSTGUG00000000489	ENSTGUG00000000502	MICOS13 (ENSTGUG00000000509)	HSD11B1L (ENSTGUG00000000510)	ENSTGUG00000000514	NCLN (ENSTGUG00000000519) #17	S1PR4 (ENSTGUG00000029330) #18	ENSTGUG00000000525	ENSTGUG00000018462	GNA11 (ENSTGUG00000000541) #20	ENSTGUG00000026438 ##22	ENSTGUG00000026945 ##22	ENSTGUG00000000551 ##22	ENSTGUG00000000573 ##22	MIER2 (ENSTGUG00000000596)	ENSTGUG00000000601	ENSTGUG00000000605	ENSTGUG00000019805	TPGS1 (ENSTGUG00000029200)	CDC34 (ENSTGUG00000000612)	BSG (ENSTGUG00000000614)	HCN2 (ENSTGUG00000000617)	POLRMT (ENSTGUG00000000621)	FGF22 (ENSTGUG00000000627)	RNF126 (ENSTGUG00000000628)	FSTL3 (ENSTGUG00000029467)	PRSS57 (ENSTGUG00000000638)
Gnathostomata	ANCESTRAL SPECIES	389									ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Euteleostomi	ANCESTRAL SPECIES	249											ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000154716	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00950000182925.C	ENSGT01050000244887.A.b.a ##18
Actinopterygii	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Neopterygii	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Clupeocephala	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Euteleosteomorpha	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Acanthomorphata	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Euacanthomorphacea	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Percomorphaceae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Percomorphaceae_B	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Ovalentaria	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Ovalentaria_B	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Pomacentridae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Bicolor damselfish	MODERN SPECIES	1265						odf3l2b (ENSSPAG00000007060)	cks2 (ENSSPAG00000007078)	shc2 (ENSSPAG00000007093)	ENSSPAG00000007123 #26	shdb (ENSSPAG00000007148)	s1pr3a (ENSSPAG00000007199) ##18	mier2 (ENSSPAG00000007207)	plpp2b (ENSSPAG00000007230)	plpp2b (ENSSPAG00000007257)	ENSSPAG00000007284 ##22	ENSSPAG00000007343 ##22
Reedfish	DUPLICATION
Reedfish	MODERN SPECIES	3	sf3a2 (ENSECRG00000017269)	plekhj1 (ENSECRG00000017241)	DOT1L (ENSECRG00000017121)	ap3d1 (ENSECRG00000016874)	zgc:153115 (ENSECRG00000016793)	abhd17aa (ENSECRG00000016735)	ENSECRG00000016702	rorca (ENSECRG00000016641)	SCAMP4 (ENSECRG00000016465)	ENSECRG00000016441	cactin (ENSECRG00000016403)	ENSECRG00000016294	s1pr3a (ENSECRG00000016260) ##18	mier2 (ENSECRG00000016219)	plpp2b (ENSECRG00000016162)	ENSECRG00000016127 ##22	ENSECRG00000016073 ##22	chico (ENSECRG00000016025) ##22	ENSECRG00000015984	gna15.4 (ENSECRG00000015176)	C2CD4C (ENSECRG00000015075)	cdc34a (ENSECRG00000014989)	ENSECRG00000014959	ENSECRG00000014936	shc2 (ENSECRG00000014647)	cks2 (ENSECRG00000014512)	odf3l2a (ENSECRG00000014440)	ENSECRG00000020868	ENSECRG00000020849	rex1bd (ENSECRG00000020832)	crlf1b (ENSECRG00000020819)
Reedfish	MODERN SPECIES	3	tmem59l (ENSECRG00000020800)	crlf1b (ENSECRG00000020819)	rex1bd (ENSECRG00000020832)	ENSECRG00000020849	ENSECRG00000020868	odf3l2a (ENSECRG00000014440)	cks2 (ENSECRG00000014512)	shc2 (ENSECRG00000014647)	ENSECRG00000014936	ENSECRG00000014959	cdc34a (ENSECRG00000014989)	C2CD4C (ENSECRG00000015075)	gna15.4 (ENSECRG00000015176)	ENSECRG00000015984	chico (ENSECRG00000016025) ##22	ENSECRG00000016073 ##22	ENSECRG00000016127 ##22	plpp2b (ENSECRG00000016162)	mier2 (ENSECRG00000016219)	s1pr3a (ENSECRG00000016260) ##18	ENSECRG00000016294	cactin (ENSECRG00000016403)	ENSECRG00000016441	SCAMP4 (ENSECRG00000016465)	rorca (ENSECRG00000016641)	ENSECRG00000016702	abhd17aa (ENSECRG00000016735)	zgc:153115 (ENSECRG00000016793)	ap3d1 (ENSECRG00000016874)	DOT1L (ENSECRG00000017121)	plekhj1 (ENSECRG00000017241)
Sarcopterygii	ANCESTRAL SPECIES	66	ENSGT00940000160280	ENSGT00940000154739.B	ENSGT00940000160580	ENSGT00940000162161.A	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000154630.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT00390000014361	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17
Tetrapoda	ANCESTRAL SPECIES	55	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00960000189417	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629
Amniota	ANCESTRAL SPECIES	23	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916	ENSGT01090000261062	ENSGT01010000222912
Mammalia	ANCESTRAL SPECIES	39	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000161188.c.b	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000161827	ENSGT00940000159489	ENSGT00390000012482	ENSGT00950000182904.a.b.b	ENSGT00940000162475
Platypus	DUPLICATION
Platypus	MODERN SPECIES	84	ENSOANG00000044451	POLRMT (ENSOANG00000043621)	ENSOANG00000041427	BSG (ENSOANG00000048631)	ENSOANG00000021318	CDC34 (ENSOANG00000010137)	TPGS1 (ENSOANG00000043667)	ENSOANG00000049713	ENSOANG00000042371	ENSOANG00000006982	ENSOANG00000037421	C2CD4C (ENSOANG00000050707)	ENSOANG00000047030	ENSOANG00000044008	PLPP2 (ENSOANG00000048271)	ENSOANG00000039271 ##22	ENSOANG00000008780 ##22	ENSOANG00000043023 ##22	ENSOANG00000039193 #20	GNA15 (ENSOANG00000001318) #19	S1PR4 (ENSOANG00000007015) #18	NCLN (ENSOANG00000003212) #17	CELF5 (ENSOANG00000043136) #16	ENSOANG00000037797	ENSOANG00000006364	ENSOANG00000038182	FCHO1 (ENSOANG00000050662)	ENSOANG00000002522	RFLCII (ENSOANG00000050111)	JAK3 (ENSOANG00000005345)	SLC5A5 (ENSOANG00000042719)
Platypus	MODERN SPECIES	84	ENSOANG00000046007	SLC5A5 (ENSOANG00000042719)	JAK3 (ENSOANG00000005345)	RFLCII (ENSOANG00000050111)	ENSOANG00000002522	FCHO1 (ENSOANG00000050662)	ENSOANG00000038182	ENSOANG00000006364	ENSOANG00000037797	CELF5 (ENSOANG00000043136) #16	NCLN (ENSOANG00000003212) #17	S1PR4 (ENSOANG00000007015) #18	GNA15 (ENSOANG00000001318) #19	ENSOANG00000039193 #20	ENSOANG00000043023 ##22	ENSOANG00000008780 ##22	ENSOANG00000039271 ##22	PLPP2 (ENSOANG00000048271)	ENSOANG00000044008	ENSOANG00000047030	C2CD4C (ENSOANG00000050707)	ENSOANG00000037421	ENSOANG00000006982	ENSOANG00000042371	ENSOANG00000049713	TPGS1 (ENSOANG00000043667)	CDC34 (ENSOANG00000010137)	ENSOANG00000021318	BSG (ENSOANG00000048631)	ENSOANG00000041427	POLRMT (ENSOANG00000043621)
Theria	ANCESTRAL SPECIES	31	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a	ENSGT00940000159489
Eutheria	ANCESTRAL SPECIES	24																ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Atlantogenata	ANCESTRAL SPECIES	79																ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Afrotheria	ANCESTRAL SPECIES	97																ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Afrotheria_a	ANCESTRAL SPECIES	101																ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161736 #19	ENSGT00940000161033 #20	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT01000000216439	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Elephant	MODERN SPECIES	60																ENSLAFG00000022423 ##22	TLE2 (ENSLAFG00000007679) #22	GNA11 (ENSLAFG00000011237) #20	S1PR4 (ENSLAFG00000000780) #18	NCLN (ENSLAFG00000028713) #17	CELF5 (ENSLAFG00000026387) #16	NFIC (ENSLAFG00000007134) #15	ENSLAFG00000029999	SMIM44 (ENSLAFG00000026671)	DOHH (ENSLAFG00000011920) #13	FZR1 (ENSLAFG00000029400) #12	TEKTIP1 (ENSLAFG00000032270) #11	MFSD12 (ENSLAFG00000031512) #10	HMG20B (ENSLAFG00000007845) #9	GIPC3 (ENSLAFG00000007849) #8	ENSLAFG00000030325
Hyrax	MODERN SPECIES	582																ENSPCAG00000003289 ##22	TLE2 (ENSPCAG00000003390) #22	TLE5 (ENSPCAG00000003513) #21
Xenarthra	ANCESTRAL SPECIES	1837																ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22
Armadillo	MODERN SPECIES	3321																ENSDNOG00000047548 ##22	TLE2 (ENSDNOG00000005685) #22
Boreoeutheria	ANCESTRAL SPECIES	18	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Euarchontoglires	ANCESTRAL SPECIES	18	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Primates	ANCESTRAL SPECIES	18	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Strepsirrhini	ANCESTRAL SPECIES	26	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Lemuriformes	ANCESTRAL SPECIES	22	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Mouse lemur	MODERN SPECIES	16	ENSMICG00000028619	SPPL2B (ENSMICG00000009993)	TMPRSS9 (ENSMICG00000010010)	TIMM13 (ENSMICG00000026616)	LMNB2 (ENSMICG00000010043)	GADD45B (ENSMICG00000031371)	GNG7 (ENSMICG00000045234)	DIRAS1 (ENSMICG00000013418)	SLC39A3 (ENSMICG00000031825)	SGTA (ENSMICG00000013433)	THOP1 (ENSMICG00000031728)	ZNF554 (ENSMICG00000030632)	ZNF555 (ENSMICG00000001516)	ZNF556 (ENSMICG00000043985)	ZNF77 (ENSMICG00000044639) #24	TLE6 (ENSMICG00000003016) ##22	TLE2 (ENSMICG00000003029) #22	ENSMICG00000027776 #21	GNA11 (ENSMICG00000032000) #20	GNA15 (ENSMICG00000002977) #19	NCLN (ENSMICG00000007457) #17	CELF5 (ENSMICG00000003506) #16	NFIC (ENSMICG00000006236) #15	SMIM24 (ENSMICG00000043267) #14	SMIM44 (ENSMICG00000044026)	DOHH (ENSMICG00000044244) #13	FZR1 (ENSMICG00000015945) #12	TEKTIP1 (ENSMICG00000043061) #11	MFSD12 (ENSMICG00000026672) #10	HMG20B (ENSMICG00000028142) #9	GIPC3 (ENSMICG00000012665) #8
Lemuriformes_a	ANCESTRAL SPECIES	17	ENSGT00940000162148	ENSGT00940000160775	ENSGT00940000163572	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00500000044957 #13	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a.g #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00390000003403	ENSGT00940000162830 #24	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000163560	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231
Coquerels sifaka	MODERN SPECIES	348	ZFR2 (ENSPCOG00000016923)	MATK (ENSPCOG00000018010)	RAX2 (ENSPCOG00000022891)	MRPL54 (ENSPCOG00000027550)	APBA3 (ENSPCOG00000026721)	TJP3 (ENSPCOG00000020238)	PIP5K1C (ENSPCOG00000021588)	CACTIN (ENSPCOG00000015989)	TBXA2R (ENSPCOG00000015698) #7	GIPC3 (ENSPCOG00000000061) #8	HMG20B (ENSPCOG00000013810) #9	MFSD12 (ENSPCOG00000023032) #10	TEKTIP1 (ENSPCOG00000017742) #11	FZR1 (ENSPCOG00000020160) #12	DOHH (ENSPCOG00000002793) #13	TLE6 (ENSPCOG00000027942) ##22	TLE2 (ENSPCOG00000028201) #22	ENSPCOG00000017438 #21	GNA11 (ENSPCOG00000024506) #20	GNA15 (ENSPCOG00000013834) #19	NCLN (ENSPCOG00000024560) #17	CELF5 (ENSPCOG00000011528) #16	NFIC (ENSPCOG00000027301) #15	SMIM44 (ENSPCOG00000024749)	ZNF77 (ENSPCOG00000024746) #24	ZNF57 (ENSPCOG00000018829)	ENSPCOG00000020343	ZNF555 (ENSPCOG00000022329)	ZNF554 (ENSPCOG00000002531)	THOP1 (ENSPCOG00000025936)	SGTA (ENSPCOG00000022419)
Greater bamboo lemur	MODERN SPECIES	145																ENSPSMG00000022406 ##22	TLE2 (ENSPSMG00000022356) #22	TLE5 (ENSPSMG00000022268) #21	GNA11 (ENSPSMG00000022261) #20
Bushbaby	MODERN SPECIES	144	PEAK3 (ENSOGAG00000006375)	LINGO3 (ENSOGAG00000027300)	ENSOGAG00000000144	SPPL2B (ENSOGAG00000000145)	TMPRSS9 (ENSOGAG00000013627)	TIMM13 (ENSOGAG00000013643)	LMNB2 (ENSOGAG00000000365)	GADD45B (ENSOGAG00000000367)	GNG7 (ENSOGAG00000027288)	DIRAS1 (ENSOGAG00000000372)	SLC39A3 (ENSOGAG00000025858)	SGTA (ENSOGAG00000000374)	THOP1 (ENSOGAG00000000375)	ZNF555 (ENSOGAG00000000383)	ENSOGAG00000002111	ENSOGAG00000032033 ##22	TLE2 (ENSOGAG00000016146) #22	TLE5 (ENSOGAG00000016151) #21	GNA11 (ENSOGAG00000016154) #20	GNA15 (ENSOGAG00000026139) #19	S1PR4 (ENSOGAG00000032004) #18	NCLN (ENSOGAG00000009302) #17	CELF5 (ENSOGAG00000014161) #16	NFIC (ENSOGAG00000026321) #15	SMIM24 (ENSOGAG00000027356) #14	DOHH (ENSOGAG00000006502) #13	FZR1 (ENSOGAG00000014162) #12	MFSD12 (ENSOGAG00000014168) #10	HMG20B (ENSOGAG00000014171) #9	GIPC3 (ENSOGAG00000014175) #8	TBXA2R (ENSOGAG00000026948) #7
Haplorrhini	ANCESTRAL SPECIES	14	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Simiiformes	ANCESTRAL SPECIES	13	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Catarrhini	ANCESTRAL SPECIES		ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504
Hominoidea	ANCESTRAL SPECIES		ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504	ENSGT00390000005318.a #10
Hominidae	ANCESTRAL SPECIES		ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033.c #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504	ENSGT00390000005318.a #10
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033.c.a #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033.c.a #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Pan	ANCESTRAL SPECIES	14	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033.c.a #20	ENSGT00940000161736 #19	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Bonobo	MODERN SPECIES	10	ENSPPAG00000027367	TIMM13 (ENSPPAG00000035656)	LMNB2 (ENSPPAG00000040882)	ENSPPAG00000015281	GADD45B (ENSPPAG00000043714)	GNG7 (ENSPPAG00000036740)	DIRAS1 (ENSPPAG00000003386)	SLC39A3 (ENSPPAG00000043276)	SGTA (ENSPPAG00000018507)	THOP1 (ENSPPAG00000032083)	ZNF554 (ENSPPAG00000039331)	ZNF555 (ENSPPAG00000042762)	ZNF556 (ENSPPAG00000015477)	ENSPPAG00000028174	ZNF77 (ENSPPAG00000031195) #24	TLE6 (ENSPPAG00000029714) ##22	ENSPPAG00000038446 #22	ENSPPAG00000007067 #21	GNA11 (ENSPPAG00000038754) #20	GNA15 (ENSPPAG00000041303) #19	NCLN (ENSPPAG00000043465) #17	ENSPPAG00000029786	NFIC (ENSPPAG00000036536) #15	SMIM24 (ENSPPAG00000041504) #14	SMIM44 (ENSPPAG00000032436)	DOHH (ENSPPAG00000004289) #13	FZR1 (ENSPPAG00000043553) #12	TEKTIP1 (ENSPPAG00000035424) #11	MFSD12 (ENSPPAG00000040119) #10	HMG20B (ENSPPAG00000042698) #9	GIPC3 (ENSPPAG00000005107) #8
Chimpanzee	MODERN SPECIES	10	TMPRSS9 (ENSPTRG00000010236)	TIMM13 (ENSPTRG00000010237)	LMNB2 (ENSPTRG00000010238)	ENSPTRG00000044813	GADD45B (ENSPTRG00000044298)	GNG7 (ENSPTRG00000043589)	DIRAS1 (ENSPTRG00000029182)	SLC39A3 (ENSPTRG00000010242)	SGTA (ENSPTRG00000010243)	THOP1 (ENSPTRG00000010244)	ZNF554 (ENSPTRG00000010245)	ZNF555 (ENSPTRG00000010246)	ZNF556 (ENSPTRG00000010247)	ZNF57 (ENSPTRG00000010248)	ZNF77 (ENSPTRG00000010249) #24	TLE6 (ENSPTRG00000010250) ##22	TLE2 (ENSPTRG00000010252) #22	ENSPTRG00000043065 #22	TLE5 (ENSPTRG00000010253) #21	GNA11 (ENSPTRG00000010254) #20	GNA15 (ENSPTRG00000010256) #19	NCLN (ENSPTRG00000010258) #17	CELF5 (ENSPTRG00000010259) #16	NFIC (ENSPTRG00000010261) #15	SMIM24 (ENSPTRG00000049658) #14	SMIM44 (ENSPTRG00000050433)	DOHH (ENSPTRG00000010263) #13	FZR1 (ENSPTRG00000010264) #12	TEKTIP1 (ENSPTRG00000010265) #11	MFSD12 (ENSPTRG00000010267) #10	HMG20B (ENSPTRG00000010268) #9
Human	MODERN SPECIES	10	TMPRSS9 (ENSG00000178297)	TIMM13 (ENSG00000099800)	LMNB2 (ENSG00000176619)	GADD45B (ENSG00000099860)	GNG7 (ENSG00000176533)	DIRAS1 (ENSG00000176490)	ENSG00000267001	SLC39A3 (ENSG00000141873)	SGTA (ENSG00000104969)	THOP1 (ENSG00000172009)	ZNF554 (ENSG00000172006)	ZNF555 (ENSG00000186300)	ZNF556 (ENSG00000172000)	ZNF57 (ENSG00000171970)	ZNF77 (ENSG00000175691) #24	TLE6 (ENSG00000104953) ##22	TLE2 (ENSG00000065717) #22	TLE5 (ENSG00000104964) #21	GNA11 (ENSG00000088256) #20	GNA15 (ENSG00000060558) #19	S1PR4 (ENSG00000125910) #18	NCLN (ENSG00000125912) #17	CELF5 (ENSG00000161082) #16	NFIC (ENSG00000141905) #15	SMIM24 (ENSG00000095932) #14	SMIM44 (ENSG00000284638)	DOHH (ENSG00000129932) #13	FZR1 (ENSG00000105325) #12	MFSD12 (ENSG00000161091) #10	TEKTIP1 (ENSG00000183397) #11	HMG20B (ENSG00000064961) #9
Gorilla	MODERN SPECIES	10	ENSGGOG00000003452	TIMM13 (ENSGGOG00000003459)	LMNB2 (ENSGGOG00000003462)	ENSGGOG00000040102	GADD45B (ENSGGOG00000028478)	GNG7 (ENSGGOG00000042768)	DIRAS1 (ENSGGOG00000004553)	SLC39A3 (ENSGGOG00000039245)	SGTA (ENSGGOG00000007913)	THOP1 (ENSGGOG00000007922)	ZNF554 (ENSGGOG00000026098)	ENSGGOG00000001761	ZNF556 (ENSGGOG00000008748)	ZNF57 (ENSGGOG00000006285)	ZNF77 (ENSGGOG00000010217) #24	TLE6 (ENSGGOG00000014760) ##22	TLE2 (ENSGGOG00000014765) #22	ENSGGOG00000010731 #21	GNA11 (ENSGGOG00000014995) #20	ENSGGOG00000040253	GNA15 (ENSGGOG00000003077) #19	NCLN (ENSGGOG00000010398) #17	ENSGGOG00000041211	NFIC (ENSGGOG00000006557) #15	ENSGGOG00000038229	SMIM44 (ENSGGOG00000036474)	ENSGGOG00000011214 #13	FZR1 (ENSGGOG00000002200) #12	TEKTIP1 (ENSGGOG00000002202) #11	MFSD12 (ENSGGOG00000002205) #10	HMG20B (ENSGGOG00000014805) #9
Orangutan	MODERN SPECIES	10	TMPRSS9 (ENSPPYG00000009351)	TIMM13 (ENSPPYG00000009352)	LMNB2 (ENSPPYG00000009353)	ENSPPYG00000009354	GNG7 (ENSPPYG00000030353)	DIRAS1 (ENSPPYG00000010579)	SLC39A3 (ENSPPYG00000009357)	SGTA (ENSPPYG00000009358)	THOP1 (ENSPPYG00000009359)	ZNF554 (ENSPPYG00000039445)	ENSPPYG00000012058	ENSPPYG00000012138	ZNF555 (ENSPPYG00000009360)	ZNF556 (ENSPPYG00000039854)	ZNF77 (ENSPPYG00000009361) #24	TLE6 (ENSPPYG00000009362) ##22	TLE2 (ENSPPYG00000009363) #22	ENSPPYG00000009364 #21	GNA11 (ENSPPYG00000009366) #20	GNA15 (ENSPPYG00000009367) #19	S1PR4 (ENSPPYG00000009368) #18	NCLN (ENSPPYG00000009369) #17	CELF5 (ENSPPYG00000009370) #16	NFIC (ENSPPYG00000009371) #15	ENSPPYG00000032854 #14	SMIM44 (ENSPPYG00000009372)	DOHH (ENSPPYG00000009373) #13	FZR1 (ENSPPYG00000009374) #12	TEKTIP1 (ENSPPYG00000009376) #11	ENSPPYG00000034014	MFSD12 (ENSPPYG00000009377) #10
Gibbon	MODERN SPECIES	7	LINGO3 (ENSNLEG00000002260)	LSM7 (ENSNLEG00000002265)	ENSNLEG00000002273	ENSNLEG00000028772	LMNB2 (ENSNLEG00000002277)	GNG7 (ENSNLEG00000033380)	DIRAS1 (ENSNLEG00000019022)	SLC39A3 (ENSNLEG00000029054)	SGTA (ENSNLEG00000002311)	THOP1 (ENSNLEG00000002434)	ZNF554 (ENSNLEG00000027068)	ZNF555 (ENSNLEG00000002452)	ZNF556 (ENSNLEG00000002456)	ENSNLEG00000035301	ZNF77 (ENSNLEG00000002461) #24	TLE6 (ENSNLEG00000002466) ##22	ENSNLEG00000002512 #22	ENSNLEG00000032291 #21	ENSNLEG00000002517 #20	GNA15 (ENSNLEG00000028276) #19	NCLN (ENSNLEG00000002535) #17	ENSNLEG00000002553	ENSNLEG00000002563 #15	ENSNLEG00000034914 #14	SMIM44 (ENSNLEG00000029122)	ENSNLEG00000030890 #13	ENSNLEG00000029120	FZR1 (ENSNLEG00000002571) #12	ENSNLEG00000033946 #11	ENSNLEG00000002687 #10	GIPC3 (ENSNLEG00000002712) #8
Cercopithecidae	ANCESTRAL SPECIES	17	ENSGT00940000161621.A.a.b.b.b.a.b.c.a	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00940000161621.A.a.b.b.b.a.b.c.a	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504
Cercopithecinae_a	ANCESTRAL SPECIES	3	ENSGT00940000161621.A.a.b.b.b.a.b.c.a	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504
Cercopithecinae_b	ANCESTRAL SPECIES	13	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504	ENSGT00390000005318.a #10
Cercopithecinae_d	ANCESTRAL SPECIES	22	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00910000148188	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00910000147504	ENSGT00390000005318.a #10
Sooty mangabey	MODERN SPECIES	177	SPPL2B (ENSCATG00000037765)	TMPRSS9 (ENSCATG00000044544)	TIMM13 (ENSCATG00000011673)	LMNB2 (ENSCATG00000033476)	GADD45B (ENSCATG00000039400)	ENSCATG00000036453	DIRAS1 (ENSCATG00000018575)	SLC39A3 (ENSCATG00000031717)	ENSCATG00000006442	SGTA (ENSCATG00000033872)	THOP1 (ENSCATG00000015509)	ZNF554 (ENSCATG00000044721)	ZNF555 (ENSCATG00000041704)	ZNF556 (ENSCATG00000039430)	ZNF77 (ENSCATG00000039733) #24	TLE6 (ENSCATG00000041256) ##22	TLE2 (ENSCATG00000035147) #22	TLE5 (ENSCATG00000040517) #21	GNA11 (ENSCATG00000038504) #20	GNA15 (ENSCATG00000044954) #19	S1PR4 (ENSCATG00000017923) #18	NCLN (ENSCATG00000044668) #17	ENSCATG00000044494	NFIC (ENSCATG00000037966) #15	SMIM24 (ENSCATG00000037417) #14	SMIM44 (ENSCATG00000030734)	DOHH (ENSCATG00000033001) #13	FZR1 (ENSCATG00000044993) #12	TEKTIP1 (ENSCATG00000044766) #11	MFSD12 (ENSCATG00000045111) #10	HMG20B (ENSCATG00000034700) #9
Drill	MODERN SPECIES	1534																TLE6 (ENSMLEG00000000586) ##22	TLE2 (ENSMLEG00000008863) #22	TLE5 (ENSMLEG00000038877) #21	GNA11 (ENSMLEG00000004955) #20	GNA15 (ENSMLEG00000033896) #19	S1PR4 (ENSMLEG00000020497) #18	NCLN (ENSMLEG00000041935) #17	ENSMLEG00000000058	NFIC (ENSMLEG00000039794) #15	SMIM24 (ENSMLEG00000030699) #14	SMIM44 (ENSMLEG00000031138)	DOHH (ENSMLEG00000037533) #13	FZR1 (ENSMLEG00000042148) #12	TEKTIP1 (ENSMLEG00000038754) #11	ENSMLEG00000030548	MFSD12 (ENSMLEG00000040700) #10
Olive baboon	MODERN SPECIES	12	ZFR2 (ENSPANG00000003088)	MATK (ENSPANG00000017163)	RAX2 (ENSPANG00000013783)	MRPL54 (ENSPANG00000033944)	APBA3 (ENSPANG00000003568)	TJP3 (ENSPANG00000013784)	NFIC (ENSPANG00000004923) #15	SMIM44 (ENSPANG00000029842)	DOHH (ENSPANG00000032446) #13	FZR1 (ENSPANG00000004724) #12	TEKTIP1 (ENSPANG00000019078) #11	ENSPANG00000010575	GIPC3 (ENSPANG00000038587) #8	TBXA2R (ENSPANG00000018961) #7	CACTIN (ENSPANG00000019259)	TLE6 (ENSPANG00000014013) ##22	ENSPANG00000012740 #22	ENSPANG00000047059 #22	TLE5 (ENSPANG00000016061) #21	GNA11 (ENSPANG00000011891) #20	GNA15 (ENSPANG00000002676) #19	S1PR4 (ENSPANG00000020422) #18	NCLN (ENSPANG00000009308) #17	ZNF77 (ENSPANG00000020667) #24	ZNF57 (ENSPANG00000019079)	ZNF556 (ENSPANG00000010009)	ZNF555 (ENSPANG00000038361)	ZNF554 (ENSPANG00000030445)	THOP1 (ENSPANG00000018866)	SGTA (ENSPANG00000006535)	SLC39A3 (ENSPANG00000012108)
Macaca	ANCESTRAL SPECIES	24	ENSGT00940000158753	ENSGT00940000161621.A.a.b.b.b.a.b.c.a	ENSGT00940000159993.s.b	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Pig-tailed macaque	MODERN SPECIES	76	LSM7 (ENSMNEG00000004393)	SPPL2B (ENSMNEG00000040030)	TMPRSS9 (ENSMNEG00000035963)	TIMM13 (ENSMNEG00000041650)	LMNB2 (ENSMNEG00000043540)	GADD45B (ENSMNEG00000038733)	GNG7 (ENSMNEG00000028385)	DIRAS1 (ENSMNEG00000016474)	ENSMNEG00000041965	SLC39A3 (ENSMNEG00000028479)	SGTA (ENSMNEG00000027965)	THOP1 (ENSMNEG00000026622)	ZNF554 (ENSMNEG00000035698)	ZNF555 (ENSMNEG00000031744)	ZNF77 (ENSMNEG00000039599) #24	TLE6 (ENSMNEG00000032520) ##22	TLE2 (ENSMNEG00000036907) #22	TLE5 (ENSMNEG00000013087) #21	GNA11 (ENSMNEG00000045417) #20	GNA15 (ENSMNEG00000041090) #19	S1PR4 (ENSMNEG00000020638) #18	NCLN (ENSMNEG00000036405) #17	ENSMNEG00000001853	NFIC (ENSMNEG00000042199) #15	SMIM24 (ENSMNEG00000038502) #14	SMIM44 (ENSMNEG00000032843)	DOHH (ENSMNEG00000040585) #13	FZR1 (ENSMNEG00000028728) #12	TEKTIP1 (ENSMNEG00000031534) #11	MFSD12 (ENSMNEG00000036659) #10	HMG20B (ENSMNEG00000037721) #9
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000158753	ENSGT00940000161621.A.a.b.b.b.a.b.c.a.a	ENSGT00940000159993.s.b	ENSGT00940000159993.t	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.a.b.a.b	ENSGT01100000263497.E.a.b	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000164313	ENSGT00940000163425	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00950000182916.a.a #15	ENSGT00950000185200	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Crab-eating macaque	MODERN SPECIES	10	OAZ1 (ENSMFAG00000006874)	LSM7 (ENSMFAG00000044572)	SPPL2B (ENSMFAG00000039923)	ENSMFAG00000061899	ENSMFAG00000038356	LMNB2 (ENSMFAG00000044219)	GADD45B (ENSMFAG00000042254)	ENSMFAG00000065748	ENSMFAG00000058005	SGTA (ENSMFAG00000034409)	THOP1 (ENSMFAG00000036742)	ZNF554 (ENSMFAG00000045795)	ZNF555 (ENSMFAG00000044275)	ZNF556 (ENSMFAG00000039163)	ZNF77 (ENSMFAG00000045401) #24	TLE6 (ENSMFAG00000003537) ##22	TLE2 (ENSMFAG00000033930) #22	TLE5 (ENSMFAG00000057458) #21	ENSMFAG00000031277	ENSMFAG00000050957	NFIC (ENSMFAG00000000744) #15	SMIM24 (ENSMFAG00000037612) #14	FZR1 (ENSMFAG00000003458) #12	TEKTIP1 (ENSMFAG00000036699) #11	MFSD12 (ENSMFAG00000039649) #10	APBA3 (ENSMFAG00000044015)	MRPL54 (ENSMFAG00000003311)	MATK (ENSMFAG00000030470)	RAX2 (ENSMFAG00000065615)	ZFR2 (ENSMFAG00000031215)	ATCAY (ENSMFAG00000002982)
Rhesus	MODERN SPECIES	10	PEAK3 (ENSMMUG00000058897)	LINGO3 (ENSMMUG00000058241)	LSM7 (ENSMMUG00000000452)	TMPRSS9 (ENSMMUG00000001190)	LMNB2 (ENSMMUG00000001192)	GADD45B (ENSMMUG00000003468)	ENSMMUG00000055334	GNG7 (ENSMMUG00000065054)	DIRAS1 (ENSMMUG00000040263)	SGTA (ENSMMUG00000007265)	THOP1 (ENSMMUG00000007268)	ZNF554 (ENSMMUG00000055755)	ZNF555 (ENSMMUG00000007485)	ZNF556 (ENSMMUG00000048942)	ZNF77 (ENSMMUG00000008458) #24	TLE6 (ENSMMUG00000002912) ##22	TLE2 (ENSMMUG00000002913) #22	ENSMMUG00000050313	GNA11 (ENSMMUG00000002961) #20	GNA15 (ENSMMUG00000047845) #19	NCLN (ENSMMUG00000017036) #17	CELF5 (ENSMMUG00000015513)	ENSMMUG00000060497	NFIC (ENSMMUG00000003439) #15	ENSMMUG00000057142	ENSMMUG00000050017	SMIM24 (ENSMMUG00000010560) #14	SMIM44 (ENSMMUG00000059495)	DOHH (ENSMMUG00000057146) #13	FZR1 (ENSMMUG00000019870) #12	TEKTIP1 (ENSMMUG00000039983) #11
Vervet Monkey	MODERN SPECIES	25	TIMM13 (ENSCSAG00000011577)	LMNB2 (ENSCSAG00000011555)	GADD45B (ENSCSAG00000011516)	GNG7 (ENSCSAG00000011506)	DIRAS1 (ENSCSAG00000018460)	ENSCSAG00000018461	SLC39A3 (ENSCSAG00000011496)	SGTA (ENSCSAG00000011493)	THOP1 (ENSCSAG00000011480)	ENSCSAG00000011474	ZNF554 (ENSCSAG00000011470)	ZNF555 (ENSCSAG00000011462)	ZNF556 (ENSCSAG00000011448)	ZNF57 (ENSCSAG00000011445)	ZNF77 (ENSCSAG00000011439) #24	TLE6 (ENSCSAG00000011416) ##22	TLE2 (ENSCSAG00000011330) #22	GNA11 (ENSCSAG00000011235) #20	GNA15 (ENSCSAG00000011230) #19	S1PR4 (ENSCSAG00000018815) #18	NCLN (ENSCSAG00000011222) #17	CELF5 (ENSCSAG00000011210) #16	NFIC (ENSCSAG00000011182) #15	SMIM24 (ENSCSAG00000011179) #14	DOHH (ENSCSAG00000011169) #13	FZR1 (ENSCSAG00000011164) #12	TEKTIP1 (ENSCSAG00000011154) #11	MFSD12 (ENSCSAG00000011148) #10	HMG20B (ENSCSAG00000011140) #9	GIPC3 (ENSCSAG00000011131) #8	TBXA2R (ENSCSAG00000011119) #7
Rhinopithecus	ANCESTRAL SPECIES	5								ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Black snub-nosed monkey	MODERN SPECIES	1375														ZNF57 (ENSRBIG00000044805)	ZNF77 (ENSRBIG00000029867) #24	TLE6 (ENSRBIG00000039750) ##22	TLE2 (ENSRBIG00000028459) #22	TLE5 (ENSRBIG00000001610) #21	GNA11 (ENSRBIG00000020274) #20	GNA15 (ENSRBIG00000036769) #19	NCLN (ENSRBIG00000040050) #17	ENSRBIG00000038502	NFIC (ENSRBIG00000040502) #15	SMIM24 (ENSRBIG00000033962) #14	SMIM44 (ENSRBIG00000033666)	DOHH (ENSRBIG00000039236) #13	FZR1 (ENSRBIG00000040539) #12	TEKTIP1 (ENSRBIG00000028614) #11	MFSD12 (ENSRBIG00000017416) #10	HMG20B (ENSRBIG00000041734) #9	GIPC3 (ENSRBIG00000038552) #8
Golden snub-nosed monkey	MODERN SPECIES	1318								SLC39A3 (ENSRROG00000028677)	SGTA (ENSRROG00000018224)	THOP1 (ENSRROG00000031016)	ZNF554 (ENSRROG00000039041)	ZNF555 (ENSRROG00000043176)	ZNF556 (ENSRROG00000007558)	ZNF57 (ENSRROG00000030059)	ZNF77 (ENSRROG00000028828) #24	TLE6 (ENSRROG00000018085) ##22	TLE2 (ENSRROG00000033121) #22	TLE5 (ENSRROG00000038789) #21	GNA11 (ENSRROG00000032415) #20	GNA15 (ENSRROG00000035571) #19	NCLN (ENSRROG00000028611) #17	CELF5 (ENSRROG00000032625) #16	NFIC (ENSRROG00000044677) #15	SMIM24 (ENSRROG00000032951) #14	SMIM44 (ENSRROG00000030107)	DOHH (ENSRROG00000043930) #13	FZR1 (ENSRROG00000036142) #12	TEKTIP1 (ENSRROG00000042406) #11	MFSD12 (ENSRROG00000038465) #10	HMG20B (ENSRROG00000012256) #9	ENSRROG00000044154
Platyrrhini	ANCESTRAL SPECIES	16	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213.u.a #9
Cebidae	ANCESTRAL SPECIES	20	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213.u.a #9
Cebidae_a	ANCESTRAL SPECIES	9	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213.u.a #9
Capuchin	MODERN SPECIES	375	LSM7 (ENSCCAG00000035456)	SPPL2B (ENSCCAG00000026669)	TMPRSS9 (ENSCCAG00000025141)	TIMM13 (ENSCCAG00000029801)	LMNB2 (ENSCCAG00000000201)	GADD45B (ENSCCAG00000023859)	GNG7 (ENSCCAG00000033335)	DIRAS1 (ENSCCAG00000015194)	SLC39A3 (ENSCCAG00000022362)	SGTA (ENSCCAG00000023345)	THOP1 (ENSCCAG00000011844)	ZNF554 (ENSCCAG00000031592)	ZNF556 (ENSCCAG00000003367)	ZNF57 (ENSCCAG00000026905)	ZNF77 (ENSCCAG00000017871) #24	TLE6 (ENSCCAG00000035104) ##22	TLE2 (ENSCCAG00000031140) #22	TLE5 (ENSCCAG00000037181) #21	GNA11 (ENSCCAG00000022709) #20	GNA15 (ENSCCAG00000028488) #19	S1PR4 (ENSCCAG00000019353) #18	NCLN (ENSCCAG00000034927) #17	ENSCCAG00000028950 #16	NFIC (ENSCCAG00000035238) #15	SMIM24 (ENSCCAG00000032618) #14	SMIM44 (ENSCCAG00000024174)	DOHH (ENSCCAG00000018512) #13	ENSCCAG00000025603	FZR1 (ENSCCAG00000031294) #12	C19orf71 (ENSCCAG00000028895) #11	MFSD12 (ENSCCAG00000021716) #10
Bolivian squirrel monkey	MODERN SPECIES	150							DIRAS1 (ENSSBOG00000032130)	SLC39A3 (ENSSBOG00000019952)	ENSSBOG00000021127	SGTA (ENSSBOG00000032411)	THOP1 (ENSSBOG00000035328)	ZNF554 (ENSSBOG00000031736)	ZNF555 (ENSSBOG00000013346)	ENSSBOG00000018429	ZNF77 (ENSSBOG00000022293) #24	TLE6 (ENSSBOG00000034568) ##22	TLE2 (ENSSBOG00000029407) #22	TLE5 (ENSSBOG00000022171) #21	ENSSBOG00000011100	GNA11 (ENSSBOG00000017439) #20	GNA15 (ENSSBOG00000031168) #19	NCLN (ENSSBOG00000027521) #17	ENSSBOG00000036241 #16	NFIC (ENSSBOG00000031869) #15	SMIM24 (ENSSBOG00000019949) #14	SMIM44 (ENSSBOG00000025422)	DOHH (ENSSBOG00000021498) #13	FZR1 (ENSSBOG00000023681) #12	TEKTIP1 (ENSSBOG00000020851) #11	MFSD12 (ENSSBOG00000022502) #10	HMG20B (ENSSBOG00000034086) #9
Marmoset	MODERN SPECIES	14	SPPL2B (ENSCJAG00000010410)	TMPRSS9 (ENSCJAG00000013546)	TIMM13 (ENSCJAG00000013577)	LMNB2 (ENSCJAG00000013578)	ENSCJAG00000087139	GADD45B (ENSCJAG00000013616)	GNG7 (ENSCJAG00000071869)	DIRAS1 (ENSCJAG00000023307)	SLC39A3 (ENSCJAG00000057869)	SGTA (ENSCJAG00000003539)	THOP1 (ENSCJAG00000084222)	ZNF554 (ENSCJAG00000068037)	ZNF555 (ENSCJAG00000067047)	ZNF77 (ENSCJAG00000003471) #24	ENSCJAG00000073229	TLE6 (ENSCJAG00000018653) ##22	TLE2 (ENSCJAG00000018666) #22	ENSCJAG00000016149 #21	GNA11 (ENSCJAG00000016160) #20	GNA15 (ENSCJAG00000040313) #19	CELF5 (ENSCJAG00000039430) #16	ENSCJAG00000080745	SMIM24 (ENSCJAG00000069968) #14	SMIM44 (ENSCJAG00000039325)	DOHH (ENSCJAG00000014871) #13	FZR1 (ENSCJAG00000014877) #12	TEKTIP1 (ENSCJAG00000014896) #11	MFSD12 (ENSCJAG00000014897) #10	ENSCJAG00000003488 #9	GIPC3 (ENSCJAG00000014904) #8	TBXA2R (ENSCJAG00000014921) #7
Mas night monkey	MODERN SPECIES	937	ENSANAG00000037196	SPPL2B (ENSANAG00000035668)	TMPRSS9 (ENSANAG00000036281)	TIMM13 (ENSANAG00000024807)	LMNB2 (ENSANAG00000029909)	GADD45B (ENSANAG00000033393)	GNG7 (ENSANAG00000027430)	ENSANAG00000029903	DIRAS1 (ENSANAG00000010669)	SLC39A3 (ENSANAG00000036219)	ENSANAG00000029667	THOP1 (ENSANAG00000033301)	ZNF554 (ENSANAG00000033835)	ZNF57 (ENSANAG00000034416)	ZNF77 (ENSANAG00000012552) #24	TLE6 (ENSANAG00000025865) ##22	TLE2 (ENSANAG00000028611) #22	GNA11 (ENSANAG00000033019) #20	GNA15 (ENSANAG00000029456) #19	S1PR4 (ENSANAG00000010374) #18	NCLN (ENSANAG00000036906) #17	CELF5 (ENSANAG00000024549) #16	NFIC (ENSANAG00000036415) #15	ENSANAG00000027655	SMIM44 (ENSANAG00000014595)	DOHH (ENSANAG00000036531) #13	FZR1 (ENSANAG00000028463) #12	TEKTIP1 (ENSANAG00000033612) #11	MFSD12 (ENSANAG00000037281) #10	HMG20B (ENSANAG00000020667) #9	TBXA2R (ENSANAG00000009361) #7
Euarchontoglires_A	ANCESTRAL SPECIES	24	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Glires	ANCESTRAL SPECIES	25	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Rodentia	ANCESTRAL SPECIES	17	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Rodentia_B	ANCESTRAL SPECIES	28	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Myomorpha	ANCESTRAL SPECIES	27	ENSGT00940000153942.a.f	ENSGT00940000157273	ENSGT00440000034888	ENSGT00940000154737.c	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237 #26	ENSGT01000000215054	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Muroidea	ANCESTRAL SPECIES	32	ENSGT00940000153942.a.f	ENSGT00940000157273	ENSGT00440000034888	ENSGT00940000154737.c	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237 #26	ENSGT01000000215054	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Muroidea_A	ANCESTRAL SPECIES	25	ENSGT00940000153942.a.f	ENSGT00940000157273	ENSGT00440000034888	ENSGT00940000154737.c	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237 #26	ENSGT01000000215054	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Cricetidae	ANCESTRAL SPECIES	25	ENSGT00950000182920.b.a.a.c.a.b.b	ENSGT00940000153942.a.f	ENSGT00940000157273	ENSGT00440000034888	ENSGT00940000154737.c	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237.eb #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Cricetinae	ANCESTRAL SPECIES	4													ENSGT00940000153805.q.a.a.a #28	ENSGT00940000159237.db.a #26	ENSGT00940000160088 #25	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8	ENSGT01030000234559.a.a.a #7
Chinese hamster chok1gshd	MODERN SPECIES	2	Ubr7 (ENSCGRG00001020967)	Btbd7 (ENSCGRG00001024139)	Cox8c (ENSCGRG00001023352)	Unc79 (ENSCGRG00001017548)	Prima1 (ENSCGRG00001020834)	Fam181a (ENSCGRG00001009594)	Asb2 (ENSCGRG00001018202)	Otub2 (ENSCGRG00001012574)	Ddx24 (ENSCGRG00001009522)	ENSCGRG00001004162	ENSCGRG00001000615	ENSCGRG00001015466	ENSCGRG00001014612 #28	Ankrd24 (ENSCGRG00001010168) #26	Sirt6 (ENSCGRG00001001515) #25	Tle6 (ENSCGRG00001023857) ##22	Tle2 (ENSCGRG00001015962) #22	Tle5 (ENSCGRG00001011131) #21	Gna11 (ENSCGRG00001021073) #20	Gna15 (ENSCGRG00001019244) #19	S1pr4 (ENSCGRG00001009743) #18	Ncln (ENSCGRG00001014212) #17	ENSCGRG00001002551	Nfic (ENSCGRG00001015960) #15	Smim24 (ENSCGRG00001024709) #14	DOHH (ENSCGRG00001018617) #13	Fzr1 (ENSCGRG00001015616) #12	Tektip1 (ENSCGRG00001012954) #11	Mfsd12 (ENSCGRG00001018366) #10	Hmg20b (ENSCGRG00001016795) #9	Gipc3 (ENSCGRG00001016082) #8
Golden Hamster	MODERN SPECIES	764										ENSMAUG00000021079	ENSMAUG00000000940 ##30	ENSMAUG00000011554 #28	ENSMAUG00000009986 #26	ENSMAUG00000008197 #26	Sirt6 (ENSMAUG00000021546) #25	Tle6 (ENSMAUG00000010384) ##22	ENSMAUG00000010830 #22	ENSMAUG00000013065 #22	Tle5 (ENSMAUG00000020765) #21	Gna11 (ENSMAUG00000004382) #20	Gna15 (ENSMAUG00000016578) #19	S1pr4 (ENSMAUG00000008594) #18	Ncln (ENSMAUG00000015425) #17	ENSMAUG00000020336	Nfic (ENSMAUG00000018380) #15	Smim24 (ENSMAUG00000002297) #14	Dohh (ENSMAUG00000008351) #13	Fzr1 (ENSMAUG00000000921) #12	Tektip1 (ENSMAUG00000010716) #11	Mfsd12 (ENSMAUG00000009940) #10	Hmg20b (ENSMAUG00000020413) #9
Cricetidae_B	ANCESTRAL SPECIES	27	ENSGT00950000182920.b.a.a.c.b	ENSGT00940000153942.a.f	ENSGT00940000157273	ENSGT00440000034888	ENSGT00940000154737.c	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440	ENSGT00390000007100	ENSGT00940000159004	ENSGT00530000063615.a	ENSGT00940000160050	ENSGT00940000159237.eb #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Prairie vole	MODERN SPECIES	349									ENSMOCG00000007188	ENSMOCG00000006053	ENSMOCG00000012194	ENSMOCG00000017715 #28	ENSMOCG00000002022 #26	ENSMOCG00000016411	Sirt6 (ENSMOCG00000020031) #25	Tle6 (ENSMOCG00000021233) ##22	Tle2 (ENSMOCG00000021122) #22	ENSMOCG00000020375 #21	Gna11 (ENSMOCG00000001264) #20	Gna15 (ENSMOCG00000007607) #19	S1pr4 (ENSMOCG00000001385) #18	Ncln (ENSMOCG00000010643) #17	ENSMOCG00000005573	Nfic (ENSMOCG00000021133) #15	Smim24 (ENSMOCG00000012959) #14	Dohh (ENSMOCG00000014902) #13	Fzr1 (ENSMOCG00000012552) #12	Tektip1 (ENSMOCG00000017658) #11	Mfsd12 (ENSMOCG00000020987) #10	Hmg20b (ENSMOCG00000001874) #9	Gipc3 (ENSMOCG00000002475) #8
Northern American deer mouse	MODERN SPECIES	14	Mpnd (ENSPEMG00000015273)	Stap2 (ENSPEMG00000017988)	Fsd1 (ENSPEMG00000020510)	ENSPEMG00000027526	Shd (ENSPEMG00000009120)	Yju2 (ENSPEMG00000018282)	Ebi3 (ENSPEMG00000017922)	ENSPEMG00000025396	ENSPEMG00000012935	ENSPEMG00000016925	ENSPEMG00000015235	ENSPEMG00000007616 ##30	Ankrd24 (ENSPEMG00000023820) #26	Sirt6 (ENSPEMG00000030025) #25	ENSPEMG00000015555 #24	Tle6 (ENSPEMG00000023765) ##22	Tle2 (ENSPEMG00000023812) #22	Tle5 (ENSPEMG00000022384) #21	Gna11 (ENSPEMG00000020340) #20	Gna15 (ENSPEMG00000022124) #19	S1pr4 (ENSPEMG00000007107) #18	Ncln (ENSPEMG00000001818) #17	Celf5 (ENSPEMG00000021763) #16	ENSPEMG00000030211	Nfic (ENSPEMG00000022565) #15	ENSPEMG00000028186	Smim24 (ENSPEMG00000021225) #14	ENSPEMG00000014213 #13	Fzr1 (ENSPEMG00000020284) #12	Tektip1 (ENSPEMG00000029958) #11	Mfsd12 (ENSPEMG00000020766) #10
Murinae	ANCESTRAL SPECIES	25	ENSGT01100000263494.a.a.a.a.a.c.a ##36	ENSGT01100000263494.a.a.a.a.a.d.a.r #35	ENSGT01100000263494.a.a.a.a.a.d.a.q ##36	ENSGT01100000263494.a.a.a.a.a.d.b.c #33	ENSGT00940000160217 #32	ENSGT00940000160763 #31	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.b ##30	ENSGT00940000159237 #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Mus	ANCESTRAL SPECIES	15								ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00940000153805.q.a.a.a #28	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.b.b ##30	ENSGT00940000159237 #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000165197	ENSGT00940000154917	ENSGT00940000160733	ENSGT00940000158078	ENSGT00390000000987	ENSGT00940000173873	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000159237 #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000160733	ENSGT00940000158078	ENSGT00390000000987	ENSGT00940000173873	ENSGT00860000135672	ENSGT00700000104587	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000159237 #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Mouse	MODERN SPECIES	1	Gm4924 (ENSMUSG00000073427)	4932415D10Rik (ENSMUSG00000044581)	Zfp938 (ENSMUSG00000062931) #30	AU041133 (ENSMUSG00000078435) #29	BC024063 (ENSMUSG00000112160)	Zfp873 (ENSMUSG00000061371) #28	Zfp781 (ENSMUSG00000096718)	Gm32687 (ENSMUSG00000112640) #27	Gm4767 (ENSMUSG00000094076) ##30	Gm3055 (ENSMUSG00000094622)	Zfp433 (ENSMUSG00000096795) #27	Gm10778 (ENSMUSG00000096856) ##30	Ankrd24 (ENSMUSG00000054708) #26	Sirt6 (ENSMUSG00000034748) #25	BC025920 (ENSMUSG00000074862) #24	Tle6 (ENSMUSG00000034758) ##22	Tle2 (ENSMUSG00000034771) #22	Tle5 (ENSMUSG00000054452) #21	Gna11 (ENSMUSG00000034781) #20	Gna15 (ENSMUSG00000034792) #19	S1pr4 (ENSMUSG00000044199) #18	Ncln (ENSMUSG00000020238) #17	Celf5 (ENSMUSG00000034818) #16	Nfic (ENSMUSG00000055053) #15	Smim24 (ENSMUSG00000078439) #14	Gm48552 (ENSMUSG00000114004)	Gm48551 (ENSMUSG00000113262)	Dohh (ENSMUSG00000078440) #13	Fzr1 (ENSMUSG00000020235) #12	Tektip1 (ENSMUSG00000020234) #11	Mfsd12 (ENSMUSG00000034854) #10
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000160733	ENSGT00940000158078	ENSGT00390000000987	ENSGT00390000007685	ENSGT00860000135672	ENSGT00700000104587	ENSGT00940000153805.q.b.a.a.a.a.a.b.b.b.b #30	ENSGT00940000153805.q.a.a.b.a.a.b #29	ENSGT00530000064407.b.b.d.e.b.a	ENSGT00940000153805.q.a.a.a #28	ENSGT00940000153805.q.a.a.b.a.a.a #27	ENSGT00940000153805.q.a.a.b.a.b ##30	ENSGT00940000159237 #26	ENSGT00940000160088 #25	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
spretus	MODERN SPECIES	1	Nfyb (MGP_SPRETEiJ_G0016483)	Hcfc2 (MGP_SPRETEiJ_G0016482)	Glt8d2 (MGP_SPRETEiJ_G0016481)	Tdg (MGP_SPRETEiJ_G0016480)	Gm1553 (MGP_SPRETEiJ_G0016479)	MGP_SPRETEiJ_G0016478	Zfp938 (MGP_SPRETEiJ_G0016477) #30	AU041133 (MGP_SPRETEiJ_G0016476) #29	MGP_SPRETEiJ_G0016475	Zfp873 (MGP_SPRETEiJ_G0016474) #28	MGP_SPRETEiJ_G0016473 #27	MGP_SPRETEiJ_G0016472 ##30	Ankrd24 (MGP_SPRETEiJ_G0016471) #26	Sirt6 (MGP_SPRETEiJ_G0016470) #25	BC025920 (MGP_SPRETEiJ_G0016469) #24	Tle6 (MGP_SPRETEiJ_G0016468) ##22	Tle2 (MGP_SPRETEiJ_G0016467) #22	Tle5 (MGP_SPRETEiJ_G0016466) #21	Gna11 (MGP_SPRETEiJ_G0016465) #20	Gna15 (MGP_SPRETEiJ_G0016464) #19	S1pr4 (MGP_SPRETEiJ_G0016463) #18	MGP_SPRETEiJ_G0016462 #17	Celf5 (MGP_SPRETEiJ_G0016461) #16	Nfic (MGP_SPRETEiJ_G0016460) #15	Smim24 (MGP_SPRETEiJ_G0016459) #14	Dohh (MGP_SPRETEiJ_G0016458) #13	Fzr1 (MGP_SPRETEiJ_G0016457) #12	Tektip1 (MGP_SPRETEiJ_G0016456) #11	Mfsd12 (MGP_SPRETEiJ_G0016455) #10	Hmg20b (MGP_SPRETEiJ_G0016454) #9	Gipc3 (MGP_SPRETEiJ_G0016453) #8
Steppe mouse	MODERN SPECIES	1558														Ankrd24 (ENSMSIG00000029491) #26	Sirt6 (ENSMSIG00000029480) #25	Tle6 (ENSMSIG00000029444) ##22	Tle2 (ENSMSIG00000029418) #22
Rat	MODERN SPECIES	17	ENSRNOG00000065526	ENSRNOG00000069098	ENSRNOG00000067221	Zfp347 (ENSRNOG00000071023) #28	LOC102550657 (ENSRNOG00000062931) #29	Zfp709l1 (ENSRNOG00000066372) #29	ENSRNOG00000065149	ENSRNOG00000068241	Znf624l (ENSRNOG00000069034)	LOC100912294 (ENSRNOG00000066348) #28	LOC100909682 (ENSRNOG00000064149) #27	LOC100912294 (ENSRNOG00000064426) ##30	LOC100125368 (ENSRNOG00000068608) ##30	Ankrd24 (ENSRNOG00000006759) #26	Sirt6 (ENSRNOG00000006393) #25	Tle6 (ENSRNOG00000006350) ##22	Tle2 (ENSRNOG00000005874) #22	Tle5 (ENSRNOG00000052025) #21	Gna11 (ENSRNOG00000005446) #20	Gna15 (ENSRNOG00000005378) #19	S1pr4 (ENSRNOG00000005370) #18	Ncln (ENSRNOG00000004793) #17	Celf5 (ENSRNOG00000004695) #16	Nfic (ENSRNOG00000004505) #15	AC094643.2 (ENSRNOG00000053040)	Smim44 (ENSRNOG00000066999)	Dohh (ENSRNOG00000004259) #13	Fzr1 (ENSRNOG00000004169) #12	Tektip1 (ENSRNOG00000039861) #11	Mfsd12 (ENSRNOG00000039858) #10	Hmg20b (ENSRNOG00000020601) #9
Upper Galilee mountains blind mole rat	MODERN SPECIES	975	Plin5 (ENSNGAG00000023114)	ENSNGAG00000022527	ENSNGAG00000021303	Ubxn6 (ENSNGAG00000020979)	Chaf1a (ENSNGAG00000020900)	Sh3gl1 (ENSNGAG00000022192)	Mpnd (ENSNGAG00000022278)	Stap2 (ENSNGAG00000021317)	Fsd1 (ENSNGAG00000021877)	Shd (ENSNGAG00000003012)	Yju2 (ENSNGAG00000019627)	Ebi3 (ENSNGAG00000023241)	ENSNGAG00000019241 #26	ENSNGAG00000014424	Sirt6 (ENSNGAG00000022728) #25	ENSNGAG00000022046 ##22	ENSNGAG00000009655 #22	ENSNGAG00000019164 #22	Tle5 (ENSNGAG00000023222) #21	Gna11 (ENSNGAG00000018151) #20	Gna15 (ENSNGAG00000022090) #19	S1pr4 (ENSNGAG00000014520) #18	Ncln (ENSNGAG00000023405) #17	ENSNGAG00000019694 #16	Nfic (ENSNGAG00000021483) #15	Smim24 (ENSNGAG00000020934) #14	Dohh (ENSNGAG00000023202) #13	Fzr1 (ENSNGAG00000019979) #12	Mfsd12 (ENSNGAG00000021286) #10	Hmg20b (ENSNGAG00000022055) #9	Gipc3 (ENSNGAG00000022438) #8
Rodentia_A	ANCESTRAL SPECIES	16	ENSGT00940000163597	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Hystricomorpha	ANCESTRAL SPECIES	19	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00390000001201	ENSGT00940000160384	ENSGT00940000160036	ENSGT00940000159258	ENSGT00950000183102.A.a	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183171.A.b.a.b	ENSGT00940000159037	ENSGT00940000160231	ENSGT00940000159915
Naked mole-rat female	MODERN SPECIES	21	ZFR2 (ENSHGLG00000010154)	MATK (ENSHGLG00000006614)	MRPL54 (ENSHGLG00000006157)	APBA3 (ENSHGLG00000014560)	TJP3 (ENSHGLG00000014455)	ENSHGLG00000016360	CACTIN (ENSHGLG00000016228)	TBXA2R (ENSHGLG00000012829) #7	GIPC3 (ENSHGLG00000016188) #8	HMG20B (ENSHGLG00000015242) #9	ENSHGLG00000033274 #11	ENSHGLG00000014588 #10	FZR1 (ENSHGLG00000019224) #12	ENSHGLG00000016167	ENSHGLG00000049208	ENSHGLG00000037855 ##22	TLE2 (ENSHGLG00000013600) #22	AES (ENSHGLG00000036417) #21	GNA11 (ENSHGLG00000035049) #20	GNA15 (ENSHGLG00000033945) #19	S1PR4 (ENSHGLG00000042045) #18	ENSHGLG00000010518 #17	ENSHGLG00000040658	ENSHGLG00000002680	ENSHGLG00000034587	ENSHGLG00000032173	ENSHGLG00000032960	ENSHGLG00000044227	ENSHGLG00000035026	ENSHGLG00000049463	ENSHGLG00000044420
Sciuridae	ANCESTRAL SPECIES	23	ENSGT00940000163597	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Eurasian red squirrel	MODERN SPECIES	7	PEAK3 (ENSSVLG00005021234)	LINGO3 (ENSSVLG00005021278)	LSM7 (ENSSVLG00005021294)	SPPL2B (ENSSVLG00005021399)	TMPRSS9 (ENSSVLG00005021697)	TIMM13 (ENSSVLG00005021893)	LMNB2 (ENSSVLG00005021950)	ENSSVLG00005022082	ENSSVLG00005022148	GNG7 (ENSSVLG00005022168)	SLC39A3 (ENSSVLG00005022209)	SGTA (ENSSVLG00005022255)	THOP1 (ENSSVLG00005022285)	ZNF556 (ENSSVLG00005022445)	ZNF77 (ENSSVLG00005022489) #24	ENSSVLG00005022518 ##22	TLE2 (ENSSVLG00005022632) #22	TLE5 (ENSSVLG00005022954) #21	GNA11 (ENSSVLG00005023021) #20	GNA15 (ENSSVLG00005023052) #19	S1PR4 (ENSSVLG00005023097) #18	NCLN (ENSSVLG00005023124) #17	CELF5 (ENSSVLG00005023165) #16	NFIC (ENSSVLG00005023336) #15	ENSSVLG00005023514	DOHH (ENSSVLG00005023586) #13	FZR1 (ENSSVLG00005023633) #12	TEKTIP1 (ENSSVLG00005023668) #11	MFSD12 (ENSSVLG00005023702) #10	HMG20B (ENSSVLG00005023762) #9	GIPC3 (ENSSVLG00005023804) #8
Marmotini	ANCESTRAL SPECIES	24	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000164313	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Marmotini_b	ANCESTRAL SPECIES	9	ENSGT00390000012911	ENSGT00940000159808	ENSGT00940000162661	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000162830 #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Arctic ground squirrel	MODERN SPECIES	301															ZNF77 (ENSUPAG00010008190) #24	ENSUPAG00010008199 ##22	TLE2 (ENSUPAG00010008216) #22	TLE5 (ENSUPAG00010008263) #21	GNA11 (ENSUPAG00010008291) #20	GNA15 (ENSUPAG00010008318) #19	S1PR4 (ENSUPAG00010008324) #18	NCLN (ENSUPAG00010008331) #17	ENSUPAG00010008374	NFIC (ENSUPAG00010008410) #15	ENSUPAG00010008444 #14	SMIM44 (ENSUPAG00010008452)	DOHH (ENSUPAG00010008461) #13	FZR1 (ENSUPAG00010008472) #12	TEKTIP1 (ENSUPAG00010008492) #11	MFSD12 (ENSUPAG00010008498) #10	HMG20B (ENSUPAG00010008513) #9
Laurasiatheria	ANCESTRAL SPECIES	15	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.a.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Eulipotyphla	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a ##22
Common shrew	MODERN SPECIES	448																ENSSARG00000001105 ##22
Laurasiatheria_a	ANCESTRAL SPECIES	19	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Artiodactyla	ANCESTRAL SPECIES	23	ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00390000011698.c.a.c.b	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12
Artiodactyla_a	ANCESTRAL SPECIES	24	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00390000011698.c.a.c.b	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12
Camelidae	ANCESTRAL SPECIES	36	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Arabian camel	MODERN SPECIES	14	LSM7 (ENSCDRG00005009856)	SPPL2B (ENSCDRG00005009635)	TMPRSS9 (ENSCDRG00005009511)	TIMM13 (ENSCDRG00005009445)	LMNB2 (ENSCDRG00005008689)	GADD45B (ENSCDRG00005008620)	GNG7 (ENSCDRG00005008581)	DIRAS1 (ENSCDRG00005008559)	SLC39A3 (ENSCDRG00005008533)	SGTA (ENSCDRG00005008488)	THOP1 (ENSCDRG00005008423)	ZNF554 (ENSCDRG00005008395)	ZNF555 (ENSCDRG00005008365)	ENSCDRG00005008324 #24	ENSCDRG00005008306 #24	ENSCDRG00005008238 ##22	TLE2 (ENSCDRG00005007388) #22	GNA11 (ENSCDRG00005007156) #20	GNA15 (ENSCDRG00005007101) #19	S1PR4 (ENSCDRG00005007083) #18	NCLN (ENSCDRG00005007008) #17	ENSCDRG00005006802	NFIC (ENSCDRG00005006280) #15	SMIM24 (ENSCDRG00005006203) #14	SMIM44 (ENSCDRG00005006180)	DOHH (ENSCDRG00005006155) #13	FZR1 (ENSCDRG00005006089) #12	TEKTIP1 (ENSCDRG00005006055) #11	MFSD12 (ENSCDRG00005005999) #10	HMG20B (ENSCDRG00005005967) #9	GIPC3 (ENSCDRG00005005946) #8
Artiodactyla_b	ANCESTRAL SPECIES	25	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Cetacea	ANCESTRAL SPECIES	1	ENSGT00940000159261	ENSGT00940000153487.b.a	ENSGT00940000162053	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Odontoceti	ANCESTRAL SPECIES	1	ENSGT00940000159261	ENSGT00940000153487.b.a	ENSGT00940000162053	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Odontoceti_a	ANCESTRAL SPECIES	1	ENSGT00940000159261	ENSGT00940000153487.b.a	ENSGT00940000162053	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282.d #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Odontoceti_b	ANCESTRAL SPECIES	1	ENSGT00940000159261	ENSGT00940000153487.b.a	ENSGT00940000162053	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282.d #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Monodontidae	ANCESTRAL SPECIES	17	ENSGT00940000159261	ENSGT00940000153487.b.a	ENSGT00940000162053	ENSGT01030000234539.a.a.a	ENSGT00940000154662	ENSGT00940000161753	ENSGT00940000159842	ENSGT00940000158364	ENSGT00940000162148	ENSGT00940000160775	ENSGT00940000163572	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b.a #24	ENSGT00940000162830.a.b.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a.m #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282.d #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Narwhal	MODERN SPECIES	298	CREB3L3 (ENSMMNG00015002644)	MAP2K2 (ENSMMNG00015002569)	ZBTB7A (ENSMMNG00015002508)	PIAS4 (ENSMMNG00015002478)	EEF2 (ENSMMNG00015002426)	DAPK3 (ENSMMNG00015002394)	ENSMMNG00015002371	ATCAY (ENSMMNG00015002321)	ZFR2 (ENSMMNG00015002202)	MATK (ENSMMNG00015002087)	RAX2 (ENSMMNG00015002052)	ZNF555 (ENSMMNG00015002028)	ENSMMNG00015002004 #24	ENSMMNG00015001988 #24	ENSMMNG00015001966	ENSMMNG00015001925 ##22	TLE2 (ENSMMNG00015001829) #22	TLE5 (ENSMMNG00015001757) #21	GNA11 (ENSMMNG00015001728) #20	GNA15 (ENSMMNG00015001704) #19	S1PR4 (ENSMMNG00015001684) #18	NCLN (ENSMMNG00015001627) #17	CELF5 (ENSMMNG00015001491) #16	NFIC (ENSMMNG00015001309) #15	SMIM24 (ENSMMNG00015001179) #14	DOHH (ENSMMNG00015001138) #13	FZR1 (ENSMMNG00015001082) #12	TEKTIP1 (ENSMMNG00015001041) #11	MFSD12 (ENSMMNG00015000990) #10	HMG20B (ENSMMNG00015000925) #9	GIPC3 (ENSMMNG00015000888) #8
Beluga whale	MODERN SPECIES	62	CREB3L3 (ENSDLEG00000020225)	MAP2K2 (ENSDLEG00000020230)	ZBTB7A (ENSDLEG00000020233)	PIAS4 (ENSDLEG00000020241)	EEF2 (ENSDLEG00000020260)	DAPK3 (ENSDLEG00000020266)	NMRK2 (ENSDLEG00000020268)	ATCAY (ENSDLEG00000020274)	ZFR2 (ENSDLEG00000020297)	MATK (ENSDLEG00000020319)	RAX2 (ENSDLEG00000020322)	ZNF555 (ENSDLEG00000020325)	ENSDLEG00000020329 #24	ENSDLEG00000020333 #24	ENSDLEG00000020335 #24	ENSDLEG00000020339 ##22	ENSDLEG00000020344 #22	ENSDLEG00000020351 #22	AES (ENSDLEG00000020354) #21	GNA11 (ENSDLEG00000020358) #20	GNA15 (ENSDLEG00000020362) #19	S1PR4 (ENSDLEG00000020368) #18	NCLN (ENSDLEG00000020375) #17	ENSDLEG00000020390	ENSDLEG00000020396 #16	NFIC (ENSDLEG00000020401) #15	ENSDLEG00000020426 #14	DOHH (ENSDLEG00000020431) #13	FZR1 (ENSDLEG00000020434) #12	ENSDLEG00000015356 #11	MFSD12 (ENSDLEG00000015360) #10
Vaquita	MODERN SPECIES	14	MAP2K2 (ENSPSNG00000013148)	ZBTB7A (ENSPSNG00000013107)	PIAS4 (ENSPSNG00000013054)	EEF2 (ENSPSNG00000012974)	DAPK3 (ENSPSNG00000012917)	ENSPSNG00000012851	ATCAY (ENSPSNG00000012627)	ZFR2 (ENSPSNG00000012279)	MATK (ENSPSNG00000011874)	RAX2 (ENSPSNG00000011818)	ZNF555 (ENSPSNG00000011767)	ENSPSNG00000011752 #24	ENSPSNG00000011739 #24	ENSPSNG00000011716 #24	ENSPSNG00000011693	TLE6 (ENSPSNG00000011672) ##22	TLE2 (ENSPSNG00000011350) #22	TLE5 (ENSPSNG00000011246) #21	GNA11 (ENSPSNG00000011201) #20	GNA15 (ENSPSNG00000011159) #19	S1PR4 (ENSPSNG00000011138) #18	NCLN (ENSPSNG00000011058) #17	CELF5 (ENSPSNG00000010809) #16	SMIM24 (ENSPSNG00000010742) #14	NFIC (ENSPSNG00000010514) #15	DOHH (ENSPSNG00000010352) #13	FZR1 (ENSPSNG00000010251) #12	TEKTIP1 (ENSPSNG00000010156) #11	MFSD12 (ENSPSNG00000009980) #10	HMG20B (ENSPSNG00000009908) #9	GIPC3 (ENSPSNG00000009792) #8
Dolphin	MODERN SPECIES	3250																ENSTTRG00000007334 ##22	ENSTTRG00000007337 #22
Sperm whale	MODERN SPECIES	580																ENSPCTG00005019673 ##22
Blue whale	MODERN SPECIES	14	ANKRD24 (ENSBMSG00010004125) #26	SIRT6 (ENSBMSG00010004161) #25	CREB3L3 (ENSBMSG00010004181)	MAP2K2 (ENSBMSG00010004206)	PIAS4 (ENSBMSG00010004230)	EEF2 (ENSBMSG00010006690)	ENSBMSG00010006760	ATCAY (ENSBMSG00010006778)	ZFR2 (ENSBMSG00010006830)	ZNF555 (ENSBMSG00010007047)	ENSBMSG00010007074 #24	ENSBMSG00010007090	ENSBMSG00010007121 #24	ENSBMSG00010007140 #24	ENSBMSG00010007156	ENSBMSG00010007176 ##22	TLE2 (ENSBMSG00010007244) #22	TLE5 (ENSBMSG00010007577) #21	GNA11 (ENSBMSG00010007614) #20	GNA15 (ENSBMSG00010007638) #19	S1PR4 (ENSBMSG00010007650) #18	NCLN (ENSBMSG00010007666) #17	CELF5 (ENSBMSG00010007695) #16	NFIC (ENSBMSG00010007764) #15	ENSBMSG00010007983 #14	DOHH (ENSBMSG00010008048) #13	FZR1 (ENSBMSG00010008072) #12	MFSD12 (ENSBMSG00010008150) #10	HMG20B (ENSBMSG00010008175) #9	GIPC3 (ENSBMSG00010008191) #8	TBXA2R (ENSBMSG00010008203) #7
Pecora	ANCESTRAL SPECIES		ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Percora_a	ANCESTRAL SPECIES		ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Siberian musk deer	MODERN SPECIES	99	LSM7 (ENSMMSG00000001427)	SPPL2B (ENSMMSG00000001402)	TMPRSS9 (ENSMMSG00000001228)	TIMM13 (ENSMMSG00000001175)	LMNB2 (ENSMMSG00000001143)	GADD45B (ENSMMSG00000001115)	GNG7 (ENSMMSG00000001082)	DIRAS1 (ENSMMSG00000001071)	SLC39A3 (ENSMMSG00000001047)	SGTA (ENSMMSG00000001020)	THOP1 (ENSMMSG00000000968)	ZNF554 (ENSMMSG00000000944)	ZNF555 (ENSMMSG00000000926)	ENSMMSG00000000907 #24	ENSMMSG00000000894 #24	ENSMMSG00000000868 ##22	TLE2 (ENSMMSG00000000627) #22	TLE5 (ENSMMSG00000000569) #21	GNA11 (ENSMMSG00000000551) #20	GNA15 (ENSMMSG00000000532) #19	S1PR4 (ENSMMSG00000000524) #18	NCLN (ENSMMSG00000000514) #17	CELF5 (ENSMMSG00000000449) #16	NFIC (ENSMMSG00000000253) #15	ENSMMSG00000000182	SMIM44 (ENSMMSG00000000172)	ENSMMSG00000000156	DOHH (ENSMMSG00000000141) #13	FZR1 (ENSMMSG00000000085) #12	TEKTIP1 (ENSMMSG00000000060) #11	MFSD12 (ENSMMSG00000000043) #10
Bovidae	ANCESTRAL SPECIES		ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Bovinae	ANCESTRAL SPECIES	2	ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00960000187413	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
American bison	MODERN SPECIES	3349	OAZ1 (ENSBBBG00000024367)	LINGO3 (ENSBBBG00000024314)	LSM7 (ENSBBBG00000024293)	SPPL2B (ENSBBBG00000008884)	TMPRSS9 (ENSBBBG00000008875)	TIMM13 (ENSBBBG00000023974)	LMNB2 (ENSBBBG00000023963)	GADD45B (ENSBBBG00000023938)	GNG7 (ENSBBBG00000023928)	DIRAS1 (ENSBBBG00000023894)	SLC39A3 (ENSBBBG00000000305)	SGTA (ENSBBBG00000023876)	THOP1 (ENSBBBG00000023819)	ZNF554 (ENSBBBG00000023794)	ZNF555 (ENSBBBG00000023789)	ENSBBBG00000023769 ##22	TLE2 (ENSBBBG00000023745) #22	TLE5 (ENSBBBG00000023655) #21	GNA11 (ENSBBBG00000006176) #20	GNA15 (ENSBBBG00000006167) #19	S1PR4 (ENSBBBG00000023601) #18	NCLN (ENSBBBG00000023582) #17	ENSBBBG00000008686	NFIC (ENSBBBG00000023432) #15	SMIM24 (ENSBBBG00000023341) #14	SMIM44 (ENSBBBG00000023332)	DOHH (ENSBBBG00000008411) #13	ENSBBBG00000023317	FZR1 (ENSBBBG00000023304) #12	TEKTIP1 (ENSBBBG00000023231) #11	MFSD12 (ENSBBBG00000023220) #10
Bos	ANCESTRAL SPECIES	3	ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00960000187413	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Bos_b	ANCESTRAL SPECIES	2	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT01100000263712.a.b.a.a	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000185200	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00960000187413	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Hybrid Bos Indicus	MODERN SPECIES	26	SPPL2B (ENSBIXG00005016322)	TMPRSS9 (ENSBIXG00005016265)	TIMM13 (ENSBIXG00005016236)	LMNB2 (ENSBIXG00005016199)	GADD45B (ENSBIXG00005002579)	GNG7 (ENSBIXG00005016154)	DIRAS1 (ENSBIXG00005016138)	SLC39A3 (ENSBIXG00005016121)	ENSBIXG00005002558	SGTA (ENSBIXG00005016070)	THOP1 (ENSBIXG00005016046)	ZNF554 (ENSBIXG00005002533)	ZNF555 (ENSBIXG00005015972)	ENSBIXG00005015965 #24	ENSBIXG00005015961 #24	TLE6 (ENSBIXG00005002519) ##22	TLE2 (ENSBIXG00005015910) #22	TLE5 (ENSBIXG00005015803) #21	GNA11 (ENSBIXG00005002462) #20	GNA15 (ENSBIXG00005002453) #19	S1PR4 (ENSBIXG00005015709) #18	NCLN (ENSBIXG00005002433) #17	NFIC (ENSBIXG00005002308) #15	ENSBIXG00005015296	SMIM24 (ENSBIXG00005015291) #14	DOHH (ENSBIXG00005015281) #13	ENSBIXG00005015258	FZR1 (ENSBIXG00005006231) #12	TEKTIP1 (ENSBIXG00005015154) #11	MFSD12 (ENSBIXG00005015129) #10	HMG20B (ENSBIXG00005015091) #9
Cow	MODERN SPECIES	26	LSM7 (ENSBTAG00000004521)	SPPL2B (ENSBTAG00000004524)	TMPRSS9 (ENSBTAG00000000718)	TIMM13 (ENSBTAG00000013623)	LMNB2 (ENSBTAG00000013624)	GADD45B (ENSBTAG00000025462)	GNG7 (ENSBTAG00000007644)	DIRAS1 (ENSBTAG00000045981)	SLC39A3 (ENSBTAG00000017706)	ENSBTAG00000048696	SGTA (ENSBTAG00000015090)	THOP1 (ENSBTAG00000020446)	ZNF554 (ENSBTAG00000031352)	ZNF555 (ENSBTAG00000008397)	ENSBTAG00000012868 #24	TLE6 (ENSBTAG00000001152) ##22	TLE2 (ENSBTAG00000001153) #22	TLE5 (ENSBTAG00000031363) #21	GNA11 (ENSBTAG00000012181) #20	GNA15 (ENSBTAG00000019988) #19	S1PR4 (ENSBTAG00000000381) #18	NCLN (ENSBTAG00000020759) #17	CELF5 (ENSBTAG00000021774) #16	ENSBTAG00000054212	ENSBTAG00000051439 #16	ENSBTAG00000049701	NFIC (ENSBTAG00000008520) #15	ENSBTAG00000054259	SMIM24 (ENSBTAG00000031383) #14	DOHH (ENSBTAG00000005272) #13	ENSBTAG00000051400
Bos_a	ANCESTRAL SPECIES	2	ENSGT00950000186377	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Domestic yak	MODERN SPECIES	27	LSM7 (ENSBGRG00000001523)	SPPL2B (ENSBGRG00000001417)	TMPRSS9 (ENSBGRG00000001387)	TIMM13 (ENSBGRG00000001356)	LMNB2 (ENSBGRG00000001309)	ENSBGRG00000001269	GNG7 (ENSBGRG00000001244)	SLC39A3 (ENSBGRG00000001205)	SGTA (ENSBGRG00000001178)	ENSBGRG00000001155	THOP1 (ENSBGRG00000001102)	ZNF554 (ENSBGRG00000001093)	ZNF555 (ENSBGRG00000001084)	ENSBGRG00000001060 #24	ENSBGRG00000001055 #24	TLE6 (ENSBGRG00000001034) ##22	TLE2 (ENSBGRG00000000857) #22	TLE5 (ENSBGRG00000000793) #21	GNA11 (ENSBGRG00000000769) #20	GNA15 (ENSBGRG00000000748) #19	S1PR4 (ENSBGRG00000000735) #18	NCLN (ENSBGRG00000000641) #17	CELF5 (ENSBGRG00000000565) #16	ENSBGRG00000000535 #15	ENSBGRG00000000421 #15	ENSBGRG00000000370 #14	DOHH (ENSBGRG00000021664) #13	FZR1 (ENSBGRG00000021298) #12	TEKTIP1 (ENSBGRG00000021216) #11	MFSD12 (ENSBGRG00000021107) #10	HMG20B (ENSBGRG00000021064) #9
Wild yak	MODERN SPECIES	144	ENSBMUG00000013546	ENSBMUG00000013528	SPPL2B (ENSBMUG00000013515)	TMPRSS9 (ENSBMUG00000013490)	TIMM13 (ENSBMUG00000013464)	LMNB2 (ENSBMUG00000013421)	GADD45B (ENSBMUG00000013398)	GNG7 (ENSBMUG00000013376)	DIRAS1 (ENSBMUG00000013364)	SLC39A3 (ENSBMUG00000013351)	SGTA (ENSBMUG00000013321)	THOP1 (ENSBMUG00000013288)	ZNF554 (ENSBMUG00000013275)	ZNF555 (ENSBMUG00000013266)	ENSBMUG00000013233 #24	ENSBMUG00000013196 ##22	TLE2 (ENSBMUG00000013141) #22	TLE5 (ENSBMUG00000012985) #21	GNA11 (ENSBMUG00000012972) #20	GNA15 (ENSBMUG00000012918) #19	S1PR4 (ENSBMUG00000012890) #18	NCLN (ENSBMUG00000012866) #17	CELF5 (ENSBMUG00000012845) #16	ENSBMUG00000012820	NFIC (ENSBMUG00000012806) #15	ENSBMUG00000012785 #14	DOHH (ENSBMUG00000012771) #13	FZR1 (ENSBMUG00000012724) #12	TEKTIP1 (ENSBMUG00000012671) #11	MFSD12 (ENSBMUG00000012651) #10
Caprinae	ANCESTRAL SPECIES	3	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.b #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Goat	MODERN SPECIES	26	LSM7 (ENSCHIG00000023663)	SPPL2B (ENSCHIG00000018686)	TMPRSS9 (ENSCHIG00000017597)	TIMM13 (ENSCHIG00000003337)	LMNB2 (ENSCHIG00000013360)	GADD45B (ENSCHIG00000011819)	GNG7 (ENSCHIG00000025311)	DIRAS1 (ENSCHIG00000004255)	SLC39A3 (ENSCHIG00000019215)	SGTA (ENSCHIG00000025763)	THOP1 (ENSCHIG00000013949)	ZNF554 (ENSCHIG00000021466)	ZNF555 (ENSCHIG00000013462)	ENSCHIG00000013771 #24	ENSCHIG00000011999 #24	TLE6 (ENSCHIG00000018660) ##22	TLE2 (ENSCHIG00000026991) #22	TLE5 (ENSCHIG00000012967) #21	GNA11 (ENSCHIG00000012068) #20	GNA15 (ENSCHIG00000006621) #19	S1PR4 (ENSCHIG00000012284) #18	NCLN (ENSCHIG00000021992) #17	CELF5 (ENSCHIG00000004008) #16	NFIC (ENSCHIG00000015364) #15	SMIM24 (ENSCHIG00000016053) #14	DOHH (ENSCHIG00000023284) #13	FZR1 (ENSCHIG00000014824) #12	MFSD12 (ENSCHIG00000024505) #10	TEKTIP1 (ENSCHIG00000012701) #11	HMG20B (ENSCHIG00000023604) #9	GIPC3 (ENSCHIG00000018804) #8
Rambouillet Sheep	MODERN SPECIES	21	LINGO3 (ENSOARG00020022211)	LSM7 (ENSOARG00020022153)	SPPL2B (ENSOARG00020022087)	TMPRSS9 (ENSOARG00020021920)	TIMM13 (ENSOARG00020021880)	LMNB2 (ENSOARG00020021756)	GADD45B (ENSOARG00020021717)	GNG7 (ENSOARG00020021685)	DIRAS1 (ENSOARG00020021668)	SLC39A3 (ENSOARG00020021617)	SGTA (ENSOARG00020021585)	THOP1 (ENSOARG00020021465)	ZNF554 (ENSOARG00020021423)	ZNF555 (ENSOARG00020021394)	ENSOARG00020021357	ENSOARG00020021289 ##22	TLE2 (ENSOARG00020020198) #22	TLE5 (ENSOARG00020020135) #21	GNA11 (ENSOARG00020020092) #20	GNA15 (ENSOARG00020020045) #19	S1PR4 (ENSOARG00020020029) #18	NCLN (ENSOARG00020019971) #17	CELF5 (ENSOARG00020019796) #16	NFIC (ENSOARG00020019406) #15	SMIM24 (ENSOARG00020019336) #14	DOHH (ENSOARG00020019251) #13	FZR1 (ENSOARG00020019125) #12	TEKTIP1 (ENSOARG00020019053) #11	MFSD12 (ENSOARG00020018933) #10	HMG20B (ENSOARG00020018879) #9	GIPC3 (ENSOARG00020018810) #8
Yarkand deer	MODERN SPECIES	32	PEAK3 (ENSCHYG00000000445)	LSM7 (ENSCHYG00000000423)	TMPRSS9 (ENSCHYG00000000368)	TIMM13 (ENSCHYG00000000344)	LMNB2 (ENSCHYG00000004498)	SPPL2B (ENSCHYG00000004423)	GADD45B (ENSCHYG00000004382)	GNG7 (ENSCHYG00000004365)	DIRAS1 (ENSCHYG00000004359)	SLC39A3 (ENSCHYG00000004339)	SGTA (ENSCHYG00000004319)	THOP1 (ENSCHYG00000004286)	ZNF554 (ENSCHYG00000004250)	ZNF555 (ENSCHYG00000004235)	ENSCHYG00000004218 #24	TLE6 (ENSCHYG00000004189) ##22	ENSCHYG00000004147 #22	ENSCHYG00000004111 ##22	GNA11 (ENSCHYG00000004093) #20	GNA15 (ENSCHYG00000004083) #19	S1PR4 (ENSCHYG00000004078) #18	NCLN (ENSCHYG00000004043) #17	CELF5 (ENSCHYG00000004001) #16	NFIC (ENSCHYG00000003885) #15	SMIM24 (ENSCHYG00000003795) #14	ENSCHYG00000003765 #13	FZR1 (ENSCHYG00000003667) #12	ENSCHYG00000003615 #11	MFSD12 (ENSCHYG00000003571) #10	HMG20B (ENSCHYG00000003538) #9	GIPC3 (ENSCHYG00000003521) #8
Suina	ANCESTRAL SPECIES	16	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.a.b #24	ENSGT00940000162830.a.a.a #24	ENSGT00950000182755.b.a.a.b.a.a	ENSGT01070000257262	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Chacoan peccary	MODERN SPECIES	770	LINGO3 (ENSCWAG00000018595)	LSM7 (ENSCWAG00000018611)	SPPL2B (ENSCWAG00000018685)	TMPRSS9 (ENSCWAG00000018773)	TIMM13 (ENSCWAG00000019016)	LMNB2 (ENSCWAG00000019057)	GADD45B (ENSCWAG00000019115)	GNG7 (ENSCWAG00000019144)	DIRAS1 (ENSCWAG00000007888)	SLC39A3 (ENSCWAG00000007922)	SGTA (ENSCWAG00000007961)	THOP1 (ENSCWAG00000008013)	ENSCWAG00000008154	ZNF555 (ENSCWAG00000008231)	ENSCWAG00000008275	ENSCWAG00000008333 ##22	TLE2 (ENSCWAG00000008524) #22	TLE5 (ENSCWAG00000009613) #21	GNA11 (ENSCWAG00000009699) #20	GNA15 (ENSCWAG00000009750) #19	S1PR4 (ENSCWAG00000009788) #18	NCLN (ENSCWAG00000009813) #17	CELF5 (ENSCWAG00000009942) #16	NFIC (ENSCWAG00000010134) #15	SMIM24 (ENSCWAG00000010463) #14	SMIM44 (ENSCWAG00000010490)	DOHH (ENSCWAG00000010524) #13	FZR1 (ENSCWAG00000010574) #12	TEKTIP1 (ENSCWAG00000010670) #11	MFSD12 (ENSCWAG00000010718) #10	HMG20B (ENSCWAG00000010811) #9
Pig	MODERN SPECIES	10	TMPRSS9 (ENSSSCG00000028363)	TIMM13 (ENSSSCG00000022757)	LMNB2 (ENSSSCG00000026784)	GADD45B (ENSSSCG00000022689)	GNG7 (ENSSSCG00000033949)	DIRAS1 (ENSSSCG00000038013)	SGTA (ENSSSCG00000013467)	THOP1 (ENSSSCG00000013468)	ZNF554 (ENSSSCG00000038635)	ZNF555 (ENSSSCG00000013469)	ENSSSCG00000039774	ENSSSCG00000013471 #24	ENSSSCG00000034545 #24	ENSSSCG00000036792	ENSSSCG00000053447	ENSSSCG00000024588 ##22	TLE2 (ENSSSCG00000028995) #22	TLE5 (ENSSSCG00000032265) #21	GNA11 (ENSSSCG00000029279) #20	GNA15 (ENSSSCG00000013473) #19	S1PR4 (ENSSSCG00000013474) #18	NCLN (ENSSSCG00000013475) #17	CELF5 (ENSSSCG00000013476) #16	NFIC (ENSSSCG00000036537) #15	ENSSSCG00000038067 #14	SMIM44 (ENSSSCG00000049629)	DOHH (ENSSSCG00000013478) #13	FZR1 (ENSSSCG00000013481) #12	TEKTIP1 (ENSSSCG00000056892) #11	MFSD12 (ENSSSCG00000026169) #10	HMG20B (ENSSSCG00000040421) #9
Laurasiatheria_b	ANCESTRAL SPECIES	18	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000162830.b #24	ENSGT00950000182755.b.a.a.a.b	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Carnivora	ANCESTRAL SPECIES	6	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00910000148834	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Felidae	ANCESTRAL SPECIES	21	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274.a	ENSGT00910000148834	ENSGT00940000160274.b	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Panthera	ANCESTRAL SPECIES	15	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274.a	ENSGT00910000148834	ENSGT00940000160274.b	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Tiger	MODERN SPECIES	54	AP3D1 (ENSPTIG00000018280)	SF3A2 (ENSPTIG00000017228)	LSM7 (ENSPTIG00000016252)	ENSPTIG00000015491	ENSPTIG00000014820	GADD45B (ENSPTIG00000014382)	GNG7 (ENSPTIG00000014250)	DIRAS1 (ENSPTIG00000005639)	SLC39A3 (ENSPTIG00000013803)	SGTA (ENSPTIG00000013472)	THOP1 (ENSPTIG00000012118)	ZNF554 (ENSPTIG00000011725)	ZNF555 (ENSPTIG00000011529)	ZNF556 (ENSPTIG00000011070)	ENSPTIG00000010576	ENSPTIG00000010278 ##22	TLE2 (ENSPTIG00000008843) #22	ENSPTIG00000008105 ##22	ENSPTIG00000007808 #20	GNA15 (ENSPTIG00000006851) #19	CELF5 (ENSPTIG00000005338) #16	NFIC (ENSPTIG00000021743) #15	SMIM24 (ENSPTIG00000021624) #14	FZR1 (ENSPTIG00000021304) #12	HMG20B (ENSPTIG00000021062) #9	GIPC3 (ENSPTIG00000020400) #8	PIP5K1C (ENSPTIG00000018042)	MRPL54 (ENSPTIG00000017727)	ENSPTIG00000015790	ATCAY (ENSPTIG00000013063)	EEF2 (ENSPTIG00000012837)
Panthera_a	ANCESTRAL SPECIES																ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
lion	MODERN SPECIES	97														ENSPLOG00000017059	ENSPLOG00000017040	ENSPLOG00000016976 ##22	TLE2 (ENSPLOG00000016376) #22	TLE5 (ENSPLOG00000016251) #21	GNA11 (ENSPLOG00000016183) #20	GNA15 (ENSPLOG00000016151) #19	S1PR4 (ENSPLOG00000016130) #18	NCLN (ENSPLOG00000016079) #17	ENSPLOG00000015991
leopard	MODERN SPECIES	134															ENSPPRG00000016426	TLE6 (ENSPPRG00000019807) ##22	TLE2 (ENSPPRG00000024121) #22	TLE5 (ENSPPRG00000023990) #21	GNA11 (ENSPPRG00000023842) #20	GNA15 (ENSPPRG00000023476) #19	S1PR4 (ENSPPRG00000014630) #18	NCLN (ENSPPRG00000022717) #17	CELF5 (ENSPPRG00000001514) #16	NFIC (ENSPPRG00000002102) #15	SMIM24 (ENSPPRG00000002813) #14	SMIM44 (ENSPPRG00000003091)	DOHH (ENSPPRG00000003295) #13	FZR1 (ENSPPRG00000004528) #12	TEKTIP1 (ENSPPRG00000004778) #11	MFSD12 (ENSPPRG00000005281) #10	HMG20B (ENSPPRG00000005631) #9
Cat	MODERN SPECIES	1	TIMM13 (ENSFCAG00000044321)	LMNB2 (ENSFCAG00000013045)	GADD45B (ENSFCAG00000013046)	SLC39A3 (ENSFCAG00000033069)	SGTA (ENSFCAG00000015780)	THOP1 (ENSFCAG00000015785)	ENSFCAG00000049627	ZNF554 (ENSFCAG00000035295)	ZNF555 (ENSFCAG00000022276)	ENSFCAG00000032030	ENSFCAG00000048662	ENSFCAG00000052308 #24	ENSFCAG00000052219 #24	ENSFCAG00000050649 #24	ENSFCAG00000035220	TLE6 (ENSFCAG00000013862) ##22	TLE2 (ENSFCAG00000013863) #22	TLE5 (ENSFCAG00000039147) #21	GNA11 (ENSFCAG00000044642) #20	GNA15 (ENSFCAG00000007124) #19	S1PR4 (ENSFCAG00000007126) #18	NCLN (ENSFCAG00000029146) #17	CELF5 (ENSFCAG00000007127) #16	NFIC (ENSFCAG00000000880) #15	SMIM24 (ENSFCAG00000052509) #14	DOHH (ENSFCAG00000030060) #13	FZR1 (ENSFCAG00000002157) #12	CA2H19orf71 (ENSFCAG00000000882) #11	MFSD12 (ENSFCAG00000000883) #10	HMG20B (ENSFCAG00000026167) #9	GIPC3 (ENSFCAG00000007137) #8
Caniformia	ANCESTRAL SPECIES	4	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00390000003403	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Canidae	ANCESTRAL SPECIES		ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Canis_lupus	ANCESTRAL SPECIES	1	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT01030000239476	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000164918	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Dog	MODERN SPECIES	12	LINGO3 (ENSCAFG00845012301)	LSM7 (ENSCAFG00845012173)	SPPL2B (ENSCAFG00845011987)	TMPRSS9 (ENSCAFG00845011907)	ENSCAFG00845011879	LMNB2 (ENSCAFG00845011756)	GADD45B (ENSCAFG00845011680)	DIRAS1 (ENSCAFG00845011531)	SLC39A3 (ENSCAFG00845011490)	SGTA (ENSCAFG00845011392)	THOP1 (ENSCAFG00845011294)	ZNF554 (ENSCAFG00845011258)	ZNF555 (ENSCAFG00845011220)	ZNF556 (ENSCAFG00845011193)	ENSCAFG00845011169	ENSCAFG00845011118 ##22	TLE2 (ENSCAFG00845010748) #22	GNA11 (ENSCAFG00845010571) #20	TLE5 (ENSCAFG00845010466) #21	GNA15 (ENSCAFG00845010390) #19	S1PR4 (ENSCAFG00845010367) #18	NCLN (ENSCAFG00845010334) #17	CELF5 (ENSCAFG00845010202) #16	NFIC (ENSCAFG00845009756) #15	SMIM24 (ENSCAFG00845009603) #14	DOHH (ENSCAFG00845009508) #13	FZR1 (ENSCAFG00845009377) #12	C20H19orf71 (ENSCAFG00845009301) #11	MFSD12 (ENSCAFG00845009196) #10	ENSCAFG00845009058 #9	GIPC3 (ENSCAFG00845009000) #8
Dingo	MODERN SPECIES	112	TMPRSS9 (ENSCAFG00020018181)	TIMM13 (ENSCAFG00020018192)	LMNB2 (ENSCAFG00020018194)	ENSCAFG00020018198	GADD45B (ENSCAFG00020018199)	GNG7 (ENSCAFG00020018201)	DIRAS1 (ENSCAFG00020018203)	SLC39A3 (ENSCAFG00020018206)	SGTA (ENSCAFG00020018207)	THOP1 (ENSCAFG00020018211)	ZNF554 (ENSCAFG00020018214)	ZNF555 (ENSCAFG00020018217)	ZNF556 (ENSCAFG00020018221)	ENSCAFG00020018224	ENSCAFG00020018225	ENSCAFG00020018228 ##22	TLE2 (ENSCAFG00020018233) #22	TLE5 (ENSCAFG00020018242) #21	GNA11 (ENSCAFG00020018245) #20	GNA15 (ENSCAFG00020018249) #19	NCLN (ENSCAFG00020018259) #17	CELF5 (ENSCAFG00020018264) #16	NFIC (ENSCAFG00020018281) #15	ENSCAFG00020018292 #14	DOHH (ENSCAFG00020018295) #13	FZR1 (ENSCAFG00020018296) #12	TEKTIP1 (ENSCAFG00020018300) #11	MFSD12 (ENSCAFG00020018303) #10	HMG20B (ENSCAFG00020018306) #9	GIPC3 (ENSCAFG00020018309) #8	TBXA2R (ENSCAFG00020018318) #7
Red fox	MODERN SPECIES	163	SPPL2B (ENSVVUG00000002645)	TMPRSS9 (ENSVVUG00000002688)	TIMM13 (ENSVVUG00000002756)	LMNB2 (ENSVVUG00000002769)	GADD45B (ENSVVUG00000002785)	GNG7 (ENSVVUG00000002792)	DIRAS1 (ENSVVUG00000002802)	SLC39A3 (ENSVVUG00000002808)	SGTA (ENSVVUG00000002809)	THOP1 (ENSVVUG00000002818)	ZNF554 (ENSVVUG00000002833)	ZNF555 (ENSVVUG00000002836)	ZNF556 (ENSVVUG00000002841)	ENSVVUG00000002849	ENSVVUG00000002857	ENSVVUG00000002863 ##22	TLE2 (ENSVVUG00000002888) #22	ENSVVUG00000002912 ##22	GNA11 (ENSVVUG00000002939) #20	GNA15 (ENSVVUG00000002952) #19	S1PR4 (ENSVVUG00000002968) #18	NCLN (ENSVVUG00000002992) #17	ENSVVUG00000003242 #16	ENSVVUG00000003246	ENSVVUG00000003252 #16	NFIC (ENSVVUG00000003261) #15	SMIM24 (ENSVVUG00000003269) #14	DOHH (ENSVVUG00000003275) #13	FZR1 (ENSVVUG00000003282) #12	CUNH19orf71 (ENSVVUG00000003289) #11	MFSD12 (ENSVVUG00000003293) #10
Caniformia_b	DUPLICATION
Caniformia_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.e ##22
Ursidae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.e ##22
Ursus	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.e ##22
American black bear	MODERN SPECIES	6327																ENSUAMG00000013166 ##22
Caniformia_b	ANCESTRAL SPECIES	23	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00390000003403	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11
Ursidae	ANCESTRAL SPECIES	20	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Giant Panda	MODERN SPECIES	14	ENSAMEG00000005484	SPPL2B (ENSAMEG00000005486)	TMPRSS9 (ENSAMEG00000005520)	TIMM13 (ENSAMEG00000028321)	LMNB2 (ENSAMEG00000005548)	GNG7 (ENSAMEG00000005631)	DIRAS1 (ENSAMEG00000018705)	SLC39A3 (ENSAMEG00000028287)	SGTA (ENSAMEG00000005257)	THOP1 (ENSAMEG00000005314)	ZNF554 (ENSAMEG00000005360)	ENSAMEG00000005363	ZNF555 (ENSAMEG00000005361)	ZNF556 (ENSAMEG00000005362)	ENSAMEG00000029425	TLE6 (ENSAMEG00000005371) ##22	TLE2 (ENSAMEG00000005391) #22	ENSAMEG00000029178 ##22	GNA11 (ENSAMEG00000005458) #20	GNA15 (ENSAMEG00000005493) #19	S1PR4 (ENSAMEG00000005495) #18	NCLN (ENSAMEG00000005496) #17	ENSAMEG00000005527	NFIC (ENSAMEG00000005577) #15	ENSAMEG00000030871	ENSAMEG00000028568	ENSAMEG00000005619 #13	ENSAMEG00000030978 #11	MFSD12 (ENSAMEG00000005668) #10	ENSAMEG00000030856 #9	GIPC3 (ENSAMEG00000005731) #8
Ursus	ANCESTRAL SPECIES	16	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425.c	ENSGT00940000162830.b #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00390000003420.b #8	ENSGT00730000111899	ENSGT01030000234559.a.a.a #7	ENSGT00950000183102.A.a
American black bear	MODERN SPECIES	7571																ENSUAMG00000011418 ##22	ENSUAMG00000011419 #22
Mustelinae	ANCESTRAL SPECIES	19	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000164918.e	ENSGT01030000234519.e.a.a.b.a.a.a.f ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00950000185935	ENSGT00940000154660.a #14	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10
Ferret	MODERN SPECIES	326													ENSMPUG00000003303 #24	ENSMPUG00000003309	ENSMPUG00000003317	TLE6 (ENSMPUG00000003319) ##22	ENSMPUG00000003353 #21	ENSMPUG00000003642	GNA11 (ENSMPUG00000003649) #20	GNA15 (ENSMPUG00000003706) #19	S1PR4 (ENSMPUG00000019701) #18	ENSMPUG00000003708	NCLN (ENSMPUG00000003713) #17	CELF5 (ENSMPUG00000003723) #16	NFIC (ENSMPUG00000003850) #15	ENSMPUG00000003859	ENSMPUG00000003863 #14	DOHH (ENSMPUG00000003868) #13	ENSMPUG00000019702	FZR1 (ENSMPUG00000003874) #12	MFSD12 (ENSMPUG00000003886) #10
American mink	MODERN SPECIES	175	ENSNVIG00000005260	TMPRSS9 (ENSNVIG00000005296)	TIMM13 (ENSNVIG00000005354)	LMNB2 (ENSNVIG00000005371)	GA45B (ENSNVIG00000005407)	GNG7 (ENSNVIG00000005433)	DIRAS1 (ENSNVIG00000005451)	SLC39A3 (ENSNVIG00000005457)	SGTA (ENSNVIG00000005464)	THOP1 (ENSNVIG00000005485)	ZNF554 (ENSNVIG00000005517)	ZNF555 (ENSNVIG00000005522)	ZNF556 (ENSNVIG00000005545)	ENSNVIG00000005559	ENSNVIG00000005595	ENSNVIG00000005725 ##22	TLE2 (ENSNVIG00000005768) #22	ENSNVIG00000005979 ##22	GNA11 (ENSNVIG00000006010) #20	GNA15 (ENSNVIG00000006085) #19	S1PR4 (ENSNVIG00000006107) #18	NCLN (ENSNVIG00000006116) #17	ENSNVIG00000006149	NFIC (ENSNVIG00000006247) #15	CS077 (ENSNVIG00000006275) #14	DOHH (ENSNVIG00000006293) #13	FZR (ENSNVIG00000006305) #12	TEKTIP1 (ENSNVIG00000006395) #11	MFSD12 (ENSNVIG00000006407) #10	HMG20B (ENSNVIG00000006433) #9	GIPC3 (ENSNVIG00000006504) #8
Laurasiatheria_c	ANCESTRAL SPECIES	16	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.a.b	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9
Chiroptera	ANCESTRAL SPECIES	31	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830.a.a.b.a #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Microchiroptera	ANCESTRAL SPECIES	30	ENSGT00510000047872	ENSGT00940000158753	ENSGT00940000159993	ENSGT00390000014000	ENSGT00940000160274	ENSGT00950000182964.a.b.b	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00940000162830.a.a.b.a #24	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00950000182916.a.a #15	ENSGT00940000154660.a #14	ENSGT00390000003403	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Greater horseshoe bat	MODERN SPECIES	9	GADD45B (ENSRFEG00010008779)	GNG7 (ENSRFEG00010008752)	DIRAS1 (ENSRFEG00010008719)	SLC39A3 (ENSRFEG00010008681)	ENSRFEG00010008648	SGTA (ENSRFEG00010008608)	THOP1 (ENSRFEG00010008468)	ZNF554 (ENSRFEG00010008441)	ZNF555 (ENSRFEG00010008378)	ZNF556 (ENSRFEG00010008289)	ENSRFEG00010008241 #24	ENSRFEG00010008227 #24	ENSRFEG00010008210 #24	ENSRFEG00010008195	ENSRFEG00010008173 #24	TLE6 (ENSRFEG00010008056) ##22	TLE2 (ENSRFEG00010007728) #22	TLE5 (ENSRFEG00010007634) #21	GNA11 (ENSRFEG00010007595) #20	GNA15 (ENSRFEG00010007554) #19	S1PR4 (ENSRFEG00010007509) #18	NCLN (ENSRFEG00010021024) #17	ENSRFEG00010020980	NFIC (ENSRFEG00010020868) #15	SMIM24 (ENSRFEG00010020808) #14	SMIM44 (ENSRFEG00010020793)	DOHH (ENSRFEG00010020783) #13	FZR1 (ENSRFEG00010020757) #12	TEKTIP1 (ENSRFEG00010020734) #11	MFSD12 (ENSRFEG00010020692) #10	HMG20B (ENSRFEG00010020638) #9
Microbat	MODERN SPECIES	1279	JSRP1 (ENSMLUG00000004436)	OAZ1 (ENSMLUG00000004446)	LINGO3 (ENSMLUG00000004451)	ENSMLUG00000013097	SPPL2B (ENSMLUG00000013101)	TMPRSS9 (ENSMLUG00000014649)	TIMM13 (ENSMLUG00000014659)	LMNB2 (ENSMLUG00000013317)	GADD45B (ENSMLUG00000009419)	GNG7 (ENSMLUG00000029543)	DIRAS1 (ENSMLUG00000002744)	SLC39A3 (ENSMLUG00000014303)	SGTA (ENSMLUG00000010345)	THOP1 (ENSMLUG00000014305)	ENSMLUG00000023178	TLE6 (ENSMLUG00000013752) ##22	ENSMLUG00000013756 ##22	GNA11 (ENSMLUG00000006991) #20	ENSMLUG00000007046 #19	NCLN (ENSMLUG00000022540) #17	ENSMLUG00000006471	NFIC (ENSMLUG00000006476) #15	SMIM24 (ENSMLUG00000006483) #14
Megabat	MODERN SPECIES	2452															ENSPVAG00000002283 #24	TLE6 (ENSPVAG00000002284) ##22	TLE2 (ENSPVAG00000002285) #22
Equus	ANCESTRAL SPECIES	34	ENSGT01100000263497.E.a.b	ENSGT00940000159915	ENSGT00940000160231	ENSGT00940000159037	ENSGT00950000183171.A.b.a.b	ENSGT00940000163560	ENSGT00940000163425	ENSGT00940000164313	ENSGT00950000182755.b.a.a.b.a.a	ENSGT00940000162830.a.a.a #24	ENSGT00940000162830.a.a.b.a.b #24	ENSGT00950000182755.b.a.a.b.a.b.b.a.a	ENSGT00940000162830.a.a.b.a.a.b #24	ENSGT00940000162830.a.a.b.a.a.a #24	ENSGT00950000182755.b.a.a.a.b	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.a #22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.a #21	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000154660.a #14	ENSGT00950000182916.a.a #15	ENSGT00500000044957 #13	ENSGT00950000183104.B.a.a #12	ENSGT00390000004282 #11	ENSGT00390000005318.a #10	ENSGT00940000161213 #9	ENSGT00390000003420.b #8
Horse	MODERN SPECIES	28	THOP1 (ENSECAG00000011882)	ZNF554 (ENSECAG00000019482)	ZNF555 (ENSECAG00000020559)	ZNF556 (ENSECAG00000021726)	ENSECAG00000031178	ENSECAG00000056588 #24	ENSECAG00000045330	ENSECAG00000050855	ENSECAG00000040891 #24	ZNF57 (ENSECAG00000032997)	ENSECAG00000033586 #24	ENSECAG00000055018 #24	ENSECAG00000043845	ENSECAG00000043972 #24	ENSECAG00000001472	TLE6 (ENSECAG00000022366) ##22	TLE2 (ENSECAG00000024314) #22	GNA11 (ENSECAG00000023654) #20	S1PR4 (ENSECAG00000001851) #18	NCLN (ENSECAG00000015197) #17	CELF5 (ENSECAG00000018055) #16	ENSECAG00000044034 #14	NFIC (ENSECAG00000008134) #15	DOHH (ENSECAG00000016441) #13	FZR1 (ENSECAG00000016933) #12	TEKTIP1 (ENSECAG00000043412) #11	MFSD12 (ENSECAG00000050601) #10	ENSECAG00000033958 #9	TBXA2R (ENSECAG00000038039) #7	ENSECAG00000051988	CACTIN (ENSECAG00000039454)
Donkey	MODERN SPECIES	12	SLC39A3 (ENSEASG00005022025)	SGTA (ENSEASG00005022030)	THOP1 (ENSEASG00005022042)	ZNF554 (ENSEASG00005032271)	ZNF555 (ENSEASG00005022049)	ENSEASG00005037683	ENSEASG00005022054	ENSEASG00005022057 #24	ENSEASG00005025823 #24	ENSEASG00005022060	ENSEASG00005022062 #24	ENSEASG00005031905 #24	ENSEASG00005022064	ENSEASG00005029282 #24	ENSEASG00005032268 #24	ENSEASG00005036612 ##22	TLE2 (ENSEASG00005022082) #22	TLE5 (ENSEASG00005022089) #21	GNA11 (ENSEASG00005030989) #20	GNA15 (ENSEASG00005022106) #19	S1PR4 (ENSEASG00005027401) #18	NCLN (ENSEASG00005022112) #17	ENSEASG00005022118 #16	ENSEASG00005028009 #14	ENSEASG00005022128 #15	ENSEASG00005022139 #13	ENSEASG00005022196 #12	TEKTIP1 (ENSEASG00005036506) #11	MFSD12 (ENSEASG00005022236) #10	HMG20B (ENSEASG00005022241) #9	GIPC3 (ENSEASG00005022246) #8
Marsupialia	DUPLICATION
Marsupialia	ANCESTRAL SPECIES	25	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000162161.A	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000164119	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a	ENSGT00940000159489	ENSGT00390000012482
Opossum	DUPLICATION
Opossum	MODERN SPECIES	483																ENSMODG00000044776 ##22	ENSMODG00000036595 ##22	ENSMODG00000000281 ##22
Opossum	MODERN SPECIES	483															ENSMODG00000044776 ##22	ENSMODG00000036595 ##22	ENSMODG00000000281 ##22
Marsupialia_b	ANCESTRAL SPECIES	24	ENSGT00940000157113.g	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.b.b.f ##22	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a.i	ENSGT00940000159489	ENSGT00390000012482.b
Diprotodontia	ANCESTRAL SPECIES	54	ENSGT00940000161332	ENSGT00940000157113.g	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000160480	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a.i	ENSGT00940000159489	ENSGT00390000012482.b
Diprotodontia_a	ANCESTRAL SPECIES	53	ENSGT00940000161332	ENSGT00940000157113.g	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000154630.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a.g ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b.e ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000160221	ENSGT00940000160489	ENSGT00940000159134	ENSGT00940000163613	ENSGT00940000161827	ENSGT00390000015797.c.a.i	ENSGT00940000159489	ENSGT00390000012482.b
koala	MODERN SPECIES	133	RNF126 (ENSPCIG00000006112)	FGF22 (ENSPCIG00000035100)	ENSPCIG00000006103	ENSPCIG00000006101	BSG (ENSPCIG00000006097)	CDC34 (ENSPCIG00000006074)	TPGS1 (ENSPCIG00000006072)	ENSPCIG00000006071	ENSPCIG00000006069	ODF3L2 (ENSPCIG00000031263)	ENSPCIG00000009621	C2CD4C (ENSPCIG00000036252)	ENSPCIG00000009623	MIER2 (ENSPCIG00000022207)	PLPP2 (ENSPCIG00000022219)	ENSPCIG00000022225 ##22	ENSPCIG00000033729	ENSPCIG00000035480 ##22	ENSPCIG00000022239 ##22	GNA11 (ENSPCIG00000034212) #20	GNA15 (ENSPCIG00000027122) #19	S1PR4 (ENSPCIG00000027123) #18	NCLN (ENSPCIG00000027124) #17	CELF5 (ENSPCIG00000027126) #16	MAP1S (ENSPCIG00000027127)	FCHO1 (ENSPCIG00000027129)	B3GNT3 (ENSPCIG00000033076)	ENSPCIG00000027134	JAK3 (ENSPCIG00000027139)	ENSPCIG00000027147	ENSPCIG00000027151
Tasmanian devil	MODERN SPECIES		POLRMT (ENSSHAG00000009387)	ENSSHAG00000031962	BSG (ENSSHAG00000010030)	ENSSHAG00000020581	CDC34 (ENSSHAG00000026543)	TPGS1 (ENSSHAG00000024988)	ENSSHAG00000011038	ODF3L2 (ENSSHAG00000011299)	ENSSHAG00000023520	C2CD4C (ENSSHAG00000026956)	ENSSHAG00000011908	ENSSHAG00000027359	MIER2 (ENSSHAG00000001062)	ENSSHAG00000000085	ENSSHAG00000022969 ##22	ENSSHAG00000003187 ##22	ENSSHAG00000022567 ##22	ENSSHAG00000025822 ##22	ENSSHAG00000004602 ##22	ENSSHAG00000006119 #20	ENSSHAG00000021365 #19	ENSSHAG00000027184 #19	S1PR4 (ENSSHAG00000007216) #18	NCLN (ENSSHAG00000007494) #17	ENSSHAG00000008823 #16	ENSSHAG00000002099	B3GNT3 (ENSSHAG00000003539)	ENSSHAG00000022068	JAK3 (ENSSHAG00000004978)	ENSSHAG00000022561	SLC5A5 (ENSSHAG00000000675)
Marsupialia	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.h ##22
Marsupialia_b	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.h ##22
Tasmanian devil	MODERN SPECIES		CCDC124 (ENSSHAG00000021571)	SLC5A5 (ENSSHAG00000000675)	ENSSHAG00000022561	JAK3 (ENSSHAG00000004978)	ENSSHAG00000022068	B3GNT3 (ENSSHAG00000003539)	ENSSHAG00000002099	ENSSHAG00000008823 #16	NCLN (ENSSHAG00000007494) #17	S1PR4 (ENSSHAG00000007216) #18	ENSSHAG00000027184 #19	ENSSHAG00000021365 #19	ENSSHAG00000006119 #20	ENSSHAG00000004602 ##22	ENSSHAG00000025822 ##22	ENSSHAG00000022567 ##22	ENSSHAG00000003187 ##22	ENSSHAG00000022969 ##22	ENSSHAG00000000085	MIER2 (ENSSHAG00000001062)	ENSSHAG00000027359	ENSSHAG00000011908	C2CD4C (ENSSHAG00000026956)	ENSSHAG00000023520	ODF3L2 (ENSSHAG00000011299)	ENSSHAG00000011038	TPGS1 (ENSSHAG00000024988)	CDC34 (ENSSHAG00000026543)	ENSSHAG00000020581	BSG (ENSSHAG00000010030)	ENSSHAG00000031962
Sauria	ANCESTRAL SPECIES	20	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.b.a.a	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000183112.b.a.a	ENSGT00940000177291	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916	ENSGT01090000261062
Archelosauria	ANCESTRAL SPECIES	20	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.a.a	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061
Archosauria	ANCESTRAL SPECIES	16	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916.h
Aves	ANCESTRAL SPECIES	20	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g
Neognathae	ANCESTRAL SPECIES	21	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g
Neognathae_b	ANCESTRAL SPECIES	22	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g
Neognathae_c	ANCESTRAL SPECIES	24	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g
Golden eagle	MODERN SPECIES	3	PRSS57 (ENSACCG00020003311)	FSTL3 (ENSACCG00020003291)	RNF126 (ENSACCG00020003271)	FGF22 (ENSACCG00020003248)	POLRMT (ENSACCG00020003196)	HCN2 (ENSACCG00020003134)	BSG (ENSACCG00020003075)	CDC34 (ENSACCG00020003003)	TPGS1 (ENSACCG00020002991)	ENSACCG00020002971	ENSACCG00020002940	ENSACCG00020002839	C2CD4C (ENSACCG00020002736)	MIER2 (ENSACCG00020002716)	PLPP2 (ENSACCG00020002678)	ENSACCG00020002654 ##22	ENSACCG00020002574 ##22	ENSACCG00020002548 ##22	GNA11 (ENSACCG00020002535) #20	ENSACCG00020002524	ENSACCG00020002505	S1PR4 (ENSACCG00020002496) #18	NCLN (ENSACCG00020002467) #17	ENSACCG00020002447	CELF5 (ENSACCG00020002430) #16	HSD11B1L (ENSACCG00020002406)	MICOS13 (ENSACCG00020002390)	ENSACCG00020002339	ENSACCG00020002292
Kakapo	MODERN SPECIES	13	PRSS57 (ENSSHBG00005007403)	FSTL3 (ENSSHBG00005007393)	RNF126 (ENSSHBG00005007380)	FGF22 (ENSSHBG00005007358)	POLRMT (ENSSHBG00005007332)	HCN2 (ENSSHBG00005007287)	BSG (ENSSHBG00005007256)	CDC34 (ENSSHBG00005007233)	TPGS1 (ENSSHBG00005007224)	ENSSHBG00005007199	ENSSHBG00005007174	ENSSHBG00005007004	C2CD4C (ENSSHBG00005006957)	MIER2 (ENSSHBG00005006931)	PLPP2 (ENSSHBG00005006885)	ENSSHBG00005006820 ##22	ENSSHBG00005006798 ##22	GNA11 (ENSSHBG00005006722) #20	ENSSHBG00005006703	ENSSHBG00005006473	S1PR4 (ENSSHBG00005006301) #18	NCLN (ENSSHBG00005006281) #17	ENSSHBG00005006249	CELF5 (ENSSHBG00005006219) #16	HSD11B1L (ENSSHBG00005006185)	MICOS13 (ENSSHBG00005006161)	ENSSHBG00005006054	ENSSHBG00005005932	ENSSHBG00005005870	MAP1S (ENSSHBG00005005798)	FCHO1 (ENSSHBG00005000933)
Passeriformes	ANCESTRAL SPECIES	27	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626
Great tit	MODERN SPECIES	21	PRSS57 (ENSPMJG00000011044)	FSTL3 (ENSPMJG00000011042)	RNF126 (ENSPMJG00000011040)	FGF22 (ENSPMJG00000011038)	POLRMT (ENSPMJG00000011033)	HCN2 (ENSPMJG00000011030)	BSG (ENSPMJG00000011027)	ENSPMJG00000011022	CDC34 (ENSPMJG00000011017)	ENSPMJG00000011016	ENSPMJG00000011011	ENSPMJG00000011005	C2CD4C (ENSPMJG00000011004)	MIER2 (ENSPMJG00000011002)	PLPP2 (ENSPMJG00000011001)	ENSPMJG00000010998 ##22	ENSPMJG00000010901 ##22	ENSPMJG00000010895 ##22	GNA11 (ENSPMJG00000010893) #20	ENSPMJG00000010892	ENSPMJG00000010891	S1PR4 (ENSPMJG00000010890) #18	NCLN (ENSPMJG00000010889) #17	CELF5 (ENSPMJG00000010888) #16	ENSPMJG00000010887	MICOS13 (ENSPMJG00000010875)	ENSPMJG00000010874	ENSPMJG00000010873	SLC35E1 (ENSPMJG00000010872)	MED26 (ENSPMJG00000010871)	SMIM7 (ENSPMJG00000010869)
Passeriformes_d	ANCESTRAL SPECIES	28	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626
Flycatcher	MODERN SPECIES	20	FSTL3 (ENSFALG00000013916)	ENSFALG00000028496	RNF126 (ENSFALG00000025922)	FGF22 (ENSFALG00000013912)	POLRMT (ENSFALG00000013910)	HCN2 (ENSFALG00000024443)	ENSFALG00000024797	CDC34 (ENSFALG00000028583)	ENSFALG00000014324	BSG (ENSFALG00000013908)	ENSFALG00000013902	ENSFALG00000013900	C2CD4C (ENSFALG00000013899)	MIER2 (ENSFALG00000023554)	PLPP2 (ENSFALG00000013897)	ENSFALG00000013895 ##22	ENSFALG00000013893 ##22	ENSFALG00000025042 ##22	ENSFALG00000026809	ENSFALG00000013891	ENSFALG00000013890	S1PR4 (ENSFALG00000013889) #18	NCLN (ENSFALG00000013887) #17	CELF5 (ENSFALG00000013886) #16	ENSFALG00000013885	ENSFALG00000027254	ENSFALG00000013882	ENSFALG00000013881	SLC35E1 (ENSFALG00000023928)	MED26 (ENSFALG00000013876)	ENSFALG00000028164
Passeriformes_g	ANCESTRAL SPECIES	29	ENSGT00940000160580	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626
Passeroidea	ANCESTRAL SPECIES	29	ENSGT00940000160580	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000159007	ENSGT00390000000259	ENSGT00390000014626
Common canary	MODERN SPECIES	44	ENSSCAG00000005841	ENSSCAG00000005835	PRSS57 (ENSSCAG00000005829)	FSTL3 (ENSSCAG00000005827)	RNF126 (ENSSCAG00000005824)	FGF22 (ENSSCAG00000005822)	POLRMT (ENSSCAG00000005816)	HCN2 (ENSSCAG00000005715)	BSG (ENSSCAG00000005681)	CDC34 (ENSSCAG00000005678)	ENSSCAG00000005672	ENSSCAG00000005662	ENSSCAG00000005633	MIER2 (ENSSCAG00000005618)	PLPP2 (ENSSCAG00000005614)	ENSSCAG00000005609 ##22	ENSSCAG00000005560 ##22	ENSSCAG00000005555 ##22	GNA11 (ENSSCAG00000005541) #20	ENSSCAG00000005531	ENSSCAG00000005529	S1PR4 (ENSSCAG00000005525) #18	NCLN (ENSSCAG00000005389) #17	CELF5 (ENSSCAG00000005358) #16	ENSSCAG00000005353 ##16	ENSSCAG00000005350	ENSSCAG00000005346	ENSSCAG00000004187	ENSSCAG00000003995	ENSSCAG00000003979	SLC35E1 (ENSSCAG00000003963)
Zebra finch	MODERN SPECIES	21	MISP (ENSTGUG00000021579)	PALM (ENSTGUG00000021295)	PRSS57 (ENSTGUG00000000638)	FSTL3 (ENSTGUG00000029467)	RNF126 (ENSTGUG00000000628)	FGF22 (ENSTGUG00000000627)	POLRMT (ENSTGUG00000000621)	HCN2 (ENSTGUG00000000617)	BSG (ENSTGUG00000000614)	CDC34 (ENSTGUG00000000612)	TPGS1 (ENSTGUG00000029200)	ENSTGUG00000019805	ENSTGUG00000000605	ENSTGUG00000000601	MIER2 (ENSTGUG00000000596)	ENSTGUG00000000573 ##22	ENSTGUG00000000551 ##22	ENSTGUG00000026945 ##22	ENSTGUG00000026438 ##22	GNA11 (ENSTGUG00000000541) #20	ENSTGUG00000018462	ENSTGUG00000000525	S1PR4 (ENSTGUG00000029330) #18	NCLN (ENSTGUG00000000519) #17	ENSTGUG00000000514	HSD11B1L (ENSTGUG00000000510)	MICOS13 (ENSTGUG00000000509)	ENSTGUG00000000502	ENSTGUG00000000489	SLC35E1 (ENSTGUG00000021589)	MED26 (ENSTGUG00000025288)
Medium ground finch	MODERN SPECIES	194	ENSGFOG00000006424	ENSGFOG00000006422	PALM (ENSGFOG00000006406)	FSTL3 (ENSGFOG00000006398)	RNF126 (ENSGFOG00000006391)	FGF22 (ENSGFOG00000006374)	POLRMT (ENSGFOG00000006350)	HCN2 (ENSGFOG00000006322)	BSG (ENSGFOG00000006308)	CDC34 (ENSGFOG00000006299)	ENSGFOG00000006287	ENSGFOG00000006266	ENSGFOG00000006248	MIER2 (ENSGFOG00000006236)	PLPP2 (ENSGFOG00000006208)	ENSGFOG00000006195 ##22	ENSGFOG00000006181 ##22	ENSGFOG00000006165 ##22	GNA11 (ENSGFOG00000006146) #20	ENSGFOG00000006115	S1PR4 (ENSGFOG00000006094) #18	NCLN (ENSGFOG00000006078) #17	ENSGFOG00000006073	CELF5 (ENSGFOG00000006068) #16	HSD11B1L (ENSGFOG00000006061)	MICOS13 (ENSGFOG00000006055)	ENSGFOG00000006037	ENSGFOG00000006021	SLC35E1 (ENSGFOG00000006003)	MED26 (ENSGFOG00000005994)	SMIM7 (ENSGFOG00000005990)
Galloanserae	ANCESTRAL SPECIES	20	ENSGT00940000160580	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g
Phasianidae	ANCESTRAL SPECIES	19	ENSGT00950000183102.B	ENSGT00520000060565	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00940000165115	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00940000163250.C	ENSGT00500000044957 #13	ENSGT00950000182916.a.a #15	ENSGT00940000154929.B	ENSGT00940000155347.b	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440
Phasianidae_b	ANCESTRAL SPECIES	20	ENSGT00950000183102.B	ENSGT00520000060565	ENSGT01030000234559.a.a.a #7	ENSGT00390000003420.b #8	ENSGT00940000161213 #9	ENSGT00390000005318.a #10	ENSGT00940000165115	ENSGT00390000004282 #11	ENSGT00950000183104.B.a.a #12	ENSGT00940000163250.C	ENSGT00500000044957 #13	ENSGT00950000182916.a.a #15	ENSGT00940000154929.B	ENSGT00940000155347.b	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g	ENSGT00940000160191	ENSGT00530000063841.b	ENSGT00940000159440
Chicken	MODERN SPECIES	20	ENSGALG00010028117	TBXA2R (ENSGALG00010028120) #7	GIPC3 (ENSGALG00010028614) #8	HMG20B (ENSGALG00010028125) #9	MFSD12 (ENSGALG00010028127) #10	ENSGALG00010028133	TEKTIP1 (ENSGALG00010028135) #11	FZR1 (ENSGALG00010028139) #12	ENSGALG00010028154	DOHH (ENSGALG00010028156) #13	NFIC (ENSGALG00010028165) #15	ENSGALG00010028192	ENSGALG00010027120	ENSGALG00010027144	PLPP2 (ENSGALG00010027154)	ENSGALG00010027165 ##22	ENSGALG00010027170 ##22	ENSGALG00010027173 ##22	GNA11 (ENSGALG00010027099) #20	ENSGALG00010028733	ENSGALG00010027126	S1PR4 (ENSGALG00010027127) #18	NCLN (ENSGALG00010027129) #17	ENSGALG00010027132	CELF5 (ENSGALG00010027133) #16	HSD11B1L (ENSGALG00010027139)	C19orf70 (ENSGALG00010027151)	SAFB (ENSGALG00010027163)	ENSGALG00010027176	MPND (ENSGALG00010027184)	ENSGALG00010027189
Japanese quail	MODERN SPECIES	20	ENSCJPG00005006161	TJP3 (ENSCJPG00005006163)	ENSCJPG00005006165	TBXA2R (ENSCJPG00005006170) #7	GIPC3 (ENSCJPG00005006171) #8	HMG20B (ENSCJPG00005006172) #9	MFSD12 (ENSCJPG00005006173) #10	ENSCJPG00005006174	FZR1 (ENSCJPG00005006175) #12	ENSCJPG00005006176	ENSCJPG00005006177	NFIC (ENSCJPG00005006181) #15	ENSCJPG00005006208	ENSCJPG00005009716	PLPP2 (ENSCJPG00005009717)	ENSCJPG00005009718 ##22	ENSCJPG00005009719	ENSCJPG00005009720 ##22	ENSCJPG00005009732 ##22	GNA11 (ENSCJPG00005009735) #20	ENSCJPG00005009736	S1PR4 (ENSCJPG00005009755) #18	NCLN (ENSCJPG00005009756) #17	ENSCJPG00005009758	CELF5 (ENSCJPG00005009760) #16	HSD11B1L (ENSCJPG00005009762)	MICOS13 (ENSCJPG00005009764)	ENSCJPG00005009765	ENSCJPG00005009767	FSD1 (ENSCJPG00005009773)	ENSCJPG00005009774
Anatidae	ANCESTRAL SPECIES	59	ENSGT00940000162457	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000155916.h	ENSGT00940000155916.g
Duck	MODERN SPECIES	2300																ENSAPLG00000002508 ##22
Pink-footed goose	MODERN SPECIES	283	PRSS57 (ENSABRG00000005029)	FSTL3 (ENSABRG00000005021)	RNF126 (ENSABRG00000004878)	FGF22 (ENSABRG00000004853)	POLRMT (ENSABRG00000004780)	HCN2 (ENSABRG00000004767)	BSG (ENSABRG00000004756)	CDC34 (ENSABRG00000004747)	TPGS1 (ENSABRG00000004739)	ENSABRG00000004736	ENSABRG00000004708	ENSABRG00000004653	C2CD4C (ENSABRG00000004634)	MIER2 (ENSABRG00000004622)	PLPP2 (ENSABRG00000004596)	ENSABRG00000003850 ##22	ENSABRG00000003810 ##22	ENSABRG00000003792 ##22	GNA11 (ENSABRG00000003772) #20	ENSABRG00000003763	ENSABRG00000003735	S1PR4 (ENSABRG00000003727) #18	NCLN (ENSABRG00000003699) #17	ENSABRG00000003686	ENSABRG00000003676	CELF5 (ENSABRG00000003635) #16	HSD11B1L (ENSABRG00000003622)	MICOS13 (ENSABRG00000003593)	ENSABRG00000003556	ENSABRG00000003519
Australian saltwater crocodile	MODERN SPECIES	62	ENSCPRG00005012199	TBXA2R (ENSCPRG00005012195) #7	ENSCPRG00005012192 #8	HMG20B (ENSCPRG00005012188) #9	MFSD12 (ENSCPRG00005012178) #10	ENSCPRG00005012164	TEKTIP1 (ENSCPRG00005012161) #11	FZR1 (ENSCPRG00005012153) #12	ENSCPRG00005012146	DOHH (ENSCPRG00005012140) #13	NFIC (ENSCPRG00005012131) #15	ENSCPRG00005012118	ENSCPRG00005012081	PLPP2 (ENSCPRG00005012077)	ENSCPRG00005012070	ENSCPRG00005012053 ##22	ENSCPRG00005011960 ##22	ENSCPRG00005011947 ##22	GNA11 (ENSCPRG00005011942) #20	GNA15 (ENSCPRG00005011933) #19	ENSCPRG00005011928	S1PR4 (ENSCPRG00005011922) #18	NCLN (ENSCPRG00005011700) #17	ENSCPRG00005011654	CELF5 (ENSCPRG00005011647) #16	ENSCPRG00005011646	HSD11B1L (ENSCPRG00005011641)	MICOS13 (ENSCPRG00005011634)	ENSCPRG00005011618	ENSCPRG00005011568	ENSCPRG00005011557
Cryptodira	ANCESTRAL SPECIES	19	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.a.a	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061
Chinese turtle	MODERN SPECIES	1339							HCN2 (ENSPSIG00000003416)	BSG (ENSPSIG00000003421)	CDC34 (ENSPSIG00000003491)	TPGS1 (ENSPSIG00000001641)	ENSPSIG00000003493	ENSPSIG00000003494	ENSPSIG00000003498	MIER2 (ENSPSIG00000003504)	PLPP2 (ENSPSIG00000003509)	ENSPSIG00000003540 ##22
Testudinoidea	ANCESTRAL SPECIES	18	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.a.a	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061
Emydidae	ANCESTRAL SPECIES	14	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00960000189417	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.b.a.b	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061
Three-toed box turtle	MODERN SPECIES	92	ENSTMTG00000008514	POLRMT (ENSTMTG00000008532)	HCN2 (ENSTMTG00000008633)	ENSTMTG00000008687	ENSTMTG00000008706	CDC34 (ENSTMTG00000008730)	TPGS1 (ENSTMTG00000008742)	ENSTMTG00000008752	ENSTMTG00000008771	ODF3L2 (ENSTMTG00000008794)	ENSTMTG00000008829	ENSTMTG00000008855	ENSTMTG00000008874	MIER2 (ENSTMTG00000008896)	ENSTMTG00000008912	ENSTMTG00000008928 ##22	ENSTMTG00000008948 ##22	ENSTMTG00000008968 ##22	GNA11 (ENSTMTG00000008985) #20	GNA15 (ENSTMTG00000009022) #19	ENSTMTG00000009138	ENSTMTG00000009150	ENSTMTG00000009163	NCLN (ENSTMTG00000009205) #17	CELF5 (ENSTMTG00000009243) #16	ENSTMTG00000003035	ENSTMTG00000003043	HSD11B1L (ENSTMTG00000003049)	ENSTMTG00000003086	ENSTMTG00000003244	ENSTMTG00000003291
Testudinidae	ANCESTRAL SPECIES	20	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000164530	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT00940000153731.b	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.a	ENSGT01030000234551.j.b.a.a	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000166509	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000177291	ENSGT00950000183112.b.a.a	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061
Abingdon island giant tortoise	DUPLICATION
Abingdon island giant tortoise	MODERN SPECIES		RNF126 (ENSCABG00000003359)	FGF22 (ENSCABG00000003358)	POLRMT (ENSCABG00000003346)	HCN2 (ENSCABG00000003308)	BSG (ENSCABG00000003303)	CDC34 (ENSCABG00000003300)	TPGS1 (ENSCABG00000003296)	ENSCABG00000003293	ENSCABG00000003288	ODF3L2 (ENSCABG00000003286)	ENSCABG00000003276	C2CD4C (ENSCABG00000003274)	ENSCABG00000003271	MIER2 (ENSCABG00000003269)	PLPP2 (ENSCABG00000003266)	ENSCABG00000003264 ##22	ENSCABG00000003262 ##22	ENSCABG00000003252 ##22	ENSCABG00000003216 ##22	GNA11 (ENSCABG00000003212) #20	GNA15 (ENSCABG00000003209) #19	ENSCABG00000003208	ENSCABG00000003207	ENSCABG00000003206	S1PR4 (ENSCABG00000003205) #18	NCLN (ENSCABG00000003204) #17	ENSCABG00000003203 #16	ENSCABG00000003202	ENSCABG00000003201	HSD11B1L (ENSCABG00000003200)	MICOS13 (ENSCABG00000003199)
Abingdon island giant tortoise	MODERN SPECIES		FGF22 (ENSCABG00000003358)	POLRMT (ENSCABG00000003346)	HCN2 (ENSCABG00000003308)	BSG (ENSCABG00000003303)	CDC34 (ENSCABG00000003300)	TPGS1 (ENSCABG00000003296)	ENSCABG00000003293	ENSCABG00000003288	ODF3L2 (ENSCABG00000003286)	ENSCABG00000003276	C2CD4C (ENSCABG00000003274)	ENSCABG00000003271	MIER2 (ENSCABG00000003269)	PLPP2 (ENSCABG00000003266)	ENSCABG00000003264 ##22	ENSCABG00000003262 ##22	ENSCABG00000003252 ##22	ENSCABG00000003216 ##22	GNA11 (ENSCABG00000003212) #20	GNA15 (ENSCABG00000003209) #19	ENSCABG00000003208	ENSCABG00000003207	ENSCABG00000003206	S1PR4 (ENSCABG00000003205) #18	NCLN (ENSCABG00000003204) #17	ENSCABG00000003203 #16	ENSCABG00000003202	ENSCABG00000003201	HSD11B1L (ENSCABG00000003200)	MICOS13 (ENSCABG00000003199)	ENSCABG00000003198
Goode s thornscrub tortoise	MODERN SPECIES	14	FGF22 (ENSGEVG00005016602)	POLRMT (ENSGEVG00005004253)	HCN2 (ENSGEVG00005004303)	BSG (ENSGEVG00005004347)	ENSGEVG00005004369	CDC34 (ENSGEVG00005004403)	TPGS1 (ENSGEVG00005004421)	ENSGEVG00005004447	ENSGEVG00005004508	ODF3L2 (ENSGEVG00005004556)	ENSGEVG00005004612	C2CD4C (ENSGEVG00005004654)	ENSGEVG00005004678	MIER2 (ENSGEVG00005004722)	PLPP2 (ENSGEVG00005004755)	ENSGEVG00005004785 ##22	ENSGEVG00005004854 ##22	ENSGEVG00005004928 ##22	GNA11 (ENSGEVG00005004947) #20	GNA15 (ENSGEVG00005004969) #19	ENSGEVG00005004980	ENSGEVG00005004996	ENSGEVG00005005031	S1PR4 (ENSGEVG00005005079) #18	NCLN (ENSGEVG00005005117) #17	ENSGEVG00005005181	CELF5 (ENSGEVG00005005212) #16	ENSGEVG00005005291	ENSGEVG00005005303	HSD11B1L (ENSGEVG00005005332)	MICOS13 (ENSGEVG00005005371)
Lepidosauria	ANCESTRAL SPECIES	33	ENSGT00940000160580	ENSGT00940000161332	ENSGT00940000157113	ENSGT00940000161721	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.b.a.a	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916	ENSGT01090000261062	ENSGT01010000222912	ENSGT00940000163061.a.a
tuatara	DUPLICATION
tuatara	MODERN SPECIES	1127	ENSSPUG00000009109	FSTL3 (ENSSPUG00000009122)	RNF126 (ENSSPUG00000009136)	FGF22 (ENSSPUG00000009145)	ENSSPUG00000009159	ENSSPUG00000009181	HCN2 (ENSSPUG00000009220)	BSG (ENSSPUG00000009303)	CDC34 (ENSSPUG00000009314)	TPGS1 (ENSSPUG00000009325)	ENSSPUG00000009338	ODF3L2 (ENSSPUG00000009362)	ENSSPUG00000009380	C2CD4C (ENSSPUG00000009416)	MIER2 (ENSSPUG00000009426)	ENSSPUG00000009464 ##22	ENSSPUG00000009517 ##22	ENSSPUG00000009539 ##22	ENSSPUG00000009560 ##22	GNA11 (ENSSPUG00000009599) #20	GNA15 (ENSSPUG00000009627) #19	ENSSPUG00000009643	S1PR4 (ENSSPUG00000009653) #18	NCLN (ENSSPUG00000009665) #17	CELF5 (ENSSPUG00000009687) #16	HSD11B1L (ENSSPUG00000009709)	MICOS13 (ENSSPUG00000009724)	ENSSPUG00000009747	ENSSPUG00000009820	ENSSPUG00000009844	PTPRS (ENSSPUG00000009885)
tuatara	MODERN SPECIES	1127	KDM4B (ENSSPUG00000009943)	PTPRS (ENSSPUG00000009885)	ENSSPUG00000009844	ENSSPUG00000009820	ENSSPUG00000009747	MICOS13 (ENSSPUG00000009724)	HSD11B1L (ENSSPUG00000009709)	CELF5 (ENSSPUG00000009687) #16	NCLN (ENSSPUG00000009665) #17	S1PR4 (ENSSPUG00000009653) #18	ENSSPUG00000009643	GNA15 (ENSSPUG00000009627) #19	GNA11 (ENSSPUG00000009599) #20	ENSSPUG00000009560 ##22	ENSSPUG00000009539 ##22	ENSSPUG00000009517 ##22	ENSSPUG00000009464 ##22	MIER2 (ENSSPUG00000009426)	C2CD4C (ENSSPUG00000009416)	ENSSPUG00000009380	ODF3L2 (ENSSPUG00000009362)	ENSSPUG00000009338	TPGS1 (ENSSPUG00000009325)	CDC34 (ENSSPUG00000009314)	BSG (ENSSPUG00000009303)	HCN2 (ENSSPUG00000009220)	ENSSPUG00000009181	ENSSPUG00000009159	FGF22 (ENSSPUG00000009145)	RNF126 (ENSSPUG00000009136)	FSTL3 (ENSSPUG00000009122)
Episquamata	ANCESTRAL SPECIES	18	ENSGT00390000009230	ENSGT00940000158050	ENSGT00940000159946	ENSGT00940000170739	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.b.a.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916.f	ENSGT00940000155916.e	ENSGT01010000222912
Toxicofera	ANCESTRAL SPECIES	6	ENSGT00940000153524.a	ENSGT00390000009230	ENSGT00940000158050	ENSGT00940000159946	ENSGT00940000170739	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916.f	ENSGT00940000155916.e	ENSGT01010000222912	ENSGT00940000163061.a.a.b	ENSGT00940000153617.A.b
Elapidae	ANCESTRAL SPECIES	7	ENSGT00940000153524.a	ENSGT00390000009230	ENSGT00940000158050	ENSGT00940000159946	ENSGT00940000170739	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736.b #19	ENSGT00940000161736.a #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916.f	ENSGT00940000155916.e	ENSGT01010000222912	ENSGT00940000163061.a.a.b	ENSGT00940000153617.A.b.b
Elapidae_a	DUPLICATION
Elapidae_a	ANCESTRAL SPECIES	9	ENSGT00390000009230	ENSGT00940000158050	ENSGT00940000159946	ENSGT00940000170739	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00960000189417	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a.m ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736.b #19	ENSGT00940000161736.a #19	ENSGT01010000225861	ENSGT01030000234551.j.b.a.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000002629	ENSGT00940000165061	ENSGT00940000155916.f	ENSGT00940000155916.e	ENSGT01010000222912
Acanthophiinae	ANCESTRAL SPECIES	9	ENSGT00510000049027.c	ENSGT00940000153524.a	ENSGT00390000009230	ENSGT00940000158050	ENSGT00940000159946	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a.m ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736.b #19	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00390000002629	ENSGT00940000155916.f	ENSGT00940000155916.e	ENSGT01010000222912	ENSGT00940000163061.a.a.b
Eastern brown snake	MODERN SPECIES	10	MIDN (ENSPTXG00000000059)	CIRBP (ENSPTXG00000000076)	CBARP (ENSPTXG00000000136)	STK11 (ENSPTXG00000000255)	SBNO2 (ENSPTXG00000000275)	POLRMT (ENSPTXG00000000299)	ENSPTXG00000000325	BSG (ENSPTXG00000000335)	CDC34 (ENSPTXG00000000358)	TPGS1 (ENSPTXG00000000368)	ODF3L2 (ENSPTXG00000000378)	ENSPTXG00000000407	C2CD4C (ENSPTXG00000000452)	MIER2 (ENSPTXG00000000478)	PLPP2 (ENSPTXG00000000527)	ENSPTXG00000000556 ##22	ENSPTXG00000000618 ##22	ENSPTXG00000000622 ##22	ENSPTXG00000000625 ##22	ENSPTXG00000000629	GNA11 (ENSPTXG00000000632) #20	S1PR4 (ENSPTXG00000000636) #18	NCLN (ENSPTXG00000000643) #17	ENSPTXG00000000650 #16	SAFB (ENSPTXG00000000696)	ENSPTXG00000000713	ENSPTXG00000000715
Mainland tiger snake	MODERN SPECIES	1588																ENSNSUG00000002304 ##22
Blue-lipped sea krait	MODERN SPECIES	3658																ENSLLTG00000001587 ##22	ENSLLTG00000001628 ##22
Elapidae_a	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.n ##22
Blue-lipped sea krait	MODERN SPECIES	3658																ENSLLTG00000001628 ##22	ENSLLTG00000001587 ##22
Acanthophiinae	ANCESTRAL SPECIES																	ENSGT01030000234519.e.a.a.b.a.a.a.n ##22
Mainland tiger snake	MODERN SPECIES	1311																ENSNSUG00000011407 ##22
Lizard	DUPLICATION
Lizard	MODERN SPECIES	1829																ENSACAG00000010964 ##22	ENSACAG00000010925 ##22
Lizard	MODERN SPECIES	1829																ENSACAG00000010925 ##22	ENSACAG00000010964 ##22
Laterata	ANCESTRAL SPECIES	57	ENSGT00390000009230	ENSGT00940000158050	ENSGT00940000159946	ENSGT00940000170739	ENSGT00390000008060	ENSGT00940000156523.b	ENSGT00940000159142	ENSGT00940000160356	ENSGT00500000045074	ENSGT00510000049549	ENSGT00940000160480	ENSGT00950000182870.a.a.a.a	ENSGT00940000161259.B	ENSGT01030000234573.A.b.b.a	ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.b ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.b.a.a	ENSGT01030000234551.j.b.a.b	ENSGT01050000244887.B #18
Common wall lizard	MODERN SPECIES	9	CBARP (ENSPMRG00000019948)	ENSPMRG00000019944	STK11 (ENSPMRG00000019933)	SBNO2 (ENSPMRG00000019908)	ENSPMRG00000019903	POLRMT (ENSPMRG00000019892)	ENSPMRG00000019886	ENSPMRG00000019880	CDC34 (ENSPMRG00000019871)	TPGS1 (ENSPMRG00000019869)	ENSPMRG00000022849	ODF3L2 (ENSPMRG00000022846)	ENSPMRG00000022839	C2CD4C (ENSPMRG00000022838)	MIER2 (ENSPMRG00000022832)	ENSPMRG00000022820 ##22	ENSPMRG00000022798 ##22	ENSPMRG00000022785	ENSPMRG00000022783	ENSPMRG00000022776	ENSPMRG00000022772	GNA11 (ENSPMRG00000022765) #20	GNA15 (ENSPMRG00000022760) #19	ENSPMRG00000022755	GTPBP3 (ENSPMRG00000022752)	ANO8 (ENSPMRG00000022737)	DDA1 (ENSPMRG00000022730)	MRPL34 (ENSPMRG00000022728)	ELL (ENSPMRG00000022721)	ISYNA1 (ENSPMRG00000022714)	SSBP4 (ENSPMRG00000022706)
Argentine black and white tegu	MODERN SPECIES	109	PTPRS (ENSSMRG00000013879)	ENSSMRG00000017646	ENSSMRG00000017647	ENSSMRG00000017648	ENSSMRG00000017649	ENSSMRG00000017662	MICOS13 (ENSSMRG00000017664)	CDC34 (ENSSMRG00000017665)	TPGS1 (ENSSMRG00000017666)	ENSSMRG00000017667	ODF3L2 (ENSSMRG00000017670)	ENSSMRG00000017671	C2CD4C (ENSSMRG00000017672)	MIER2 (ENSSMRG00000017673)	PLPP2 (ENSSMRG00000017674)	ENSSMRG00000017675 ##22	ENSSMRG00000017678 ##22	ENSSMRG00000017683 ##22	UBXN6 (ENSSMRG00000017685)	CHAF1A (ENSSMRG00000017687)	SH3GL1 (ENSSMRG00000017688)	MPND (ENSSMRG00000017691)	STAP2 (ENSSMRG00000017692)	FSD1 (ENSSMRG00000017693)	CREB3L3 (ENSSMRG00000017694)	NCLN (ENSSMRG00000017695) #17	CELF5 (ENSSMRG00000017696) #16	BSG (ENSSMRG00000017728)	S1PR4 (ENSSMRG00000017729) #18	ENSSMRG00000017730	ENSSMRG00000017736
Anura	ANCESTRAL SPECIES	252															ENSGT00940000155885	ENSGT01030000234519.e.a.a.b.a.a.a ##22	ENSGT01030000234519.e.a.a.b.a.a.b.a.b.a.b ##22	ENSGT00940000161033 #20	ENSGT00940000161736 #19	ENSGT01030000234551.j.b	ENSGT01050000244887.B #18	ENSGT00500000044945.a #17	ENSGT00940000154201.a.a.b.d #16	ENSGT00940000162487	ENSGT00390000002629
Frog	MODERN SPECIES		nr2c2ap (ENSXETG00000037690)	ncan (ENSXETG00000014328)	hapln4 (ENSXETG00000014330)	tm6sf2 (ENSXETG00000014331)	tmem221 (ENSXETG00000036930)	tmem161a (ENSXETG00000014335)	slc25a42 (ENSXETG00000014336)	armc6 (ENSXETG00000014338)	sugp2 (ENSXETG00000030450)	micos13 (ENSXETG00000039864)	hsd11b1l (ENSXETG00000014342)	celf5 (ENSXETG00000014344) #16	s1pr4 (ENSXETG00000044238) #18	ncln (ENSXETG00000014348) #17	plpp2 (ENSXETG00000026886)	tle2 (ENSXETG00000014353) ##22	tle5 (ENSXETG00000014365) ##22	gna11 (ENSXETG00000014367) #20	shb (ENSXETG00000014718)	ENSXETG00000043617	aldh1b1 (ENSXETG00000014720)	igfbpl1 (ENSXETG00000014721)	topors (ENSXETG00000014724)	ENSXETG00000037169	ndufb6 (ENSXETG00000014726)	tmem215 (ENSXETG00000014727)	ENSXETG00000045296	ENSXETG00000046913	ptgr1.3 (ENSXETG00000037321)	ptgr1.4 (ENSXETG00000031127)	ENSXETG00000043837
Leishan spiny toad	MODERN SPECIES		ENSLLEG00000000905	ENSLLEG00000000872	ENSLLEG00000000786	ENSLLEG00000000773	REXO1 (ENSLLEG00000000743)	ENSLLEG00000000685	ENSLLEG00000000671	ENSLLEG00000000661	ENSLLEG00000000653	ENSLLEG00000000617	SCAMP4 (ENSLLEG00000000600)	BTBD2 (ENSLLEG00000000483)	ENSLLEG00000000470	PLPP2 (ENSLLEG00000000455)	ENSLLEG00000000445	ENSLLEG00000000369 ##22	ENSLLEG00000000311 ##22	ENSLLEG00000000285	GNA11 (ENSLLEG00000000271) #20	ENSLLEG00000000261	GNA15 (ENSLLEG00000000251) #19	ENSLLEG00000000238	S1PR4 (ENSLLEG00000000226) #18	NCLN (ENSLLEG00000000134) #17	ENSLLEG00000000101	CELF5 (ENSLLEG00000000082) #16	ENSLLEG00000000054	ENSLLEG00000000040	ENSLLEG00000002794	ENSLLEG00000002830	ENSLLEG00000002781
Elephant shark	MODERN SPECIES	1549				CBARP (ENSCMIG00000007088)	atp5f1d (ENSCMIG00000007084)	cirbp (ENSCMIG00000007083)	ENSCMIG00000007080	rnf126 (ENSCMIG00000007079)	ENSCMIG00000007078	POLRMT (ENSCMIG00000007075)	ENSCMIG00000007074	bsg (ENSCMIG00000007073)	ENSCMIG00000007070	MIER2 (ENSCMIG00000007068)	plpp2b (ENSCMIG00000007066)	ENSCMIG00000007064 ##22	ENSCMIG00000007062 ##22	ENSCMIG00000007060	ENSCMIG00000007057 ##22	ENSCMIG00000007056 ##22	ENSCMIG00000007053 ##22	ENSCMIG00000007047	GNA15 (ENSCMIG00000007046) #19	C2CD4C (ENSCMIG00000007045)	ifi30 (ENSCMIG00000007043)	pik3r2 (ENSCMIG00000006897)	MAST3 (ENSCMIG00000006760)	ENSCMIG00000006728	klhl26 (ENSCMIG00000006708)	crtc1a (ENSCMIG00000006701)	ENSCMIG00000006370