Mammalia	ANCESTRAL SPECIES	76	ENSGT00940000153909.a	ENSGT00940000161254	ENSGT01030000234578.A.b.b	ENSGT00940000161700	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Theria	ANCESTRAL SPECIES	73		ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT01100000264180	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Eutheria	ANCESTRAL SPECIES	21	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048	ENSGT00940000154432	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00940000162376	ENSGT00490000044430	ENSGT00940000162481	ENSGT00940000164658	ENSGT00940000163437
Boreoeutheria	ANCESTRAL SPECIES	5	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00940000167929	ENSGT00940000163198 #17	ENSGT01100000264180	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233
Euarchontoglires	ANCESTRAL SPECIES	5	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #11	ENSGT01000000216607	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.d	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233
Euarchontoglires_A	ANCESTRAL SPECIES	26	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925
Glires	ANCESTRAL SPECIES	27	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925
Rodentia	ANCESTRAL SPECIES	25	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00940000163087	ENSGT00940000163774	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d
Rodentia_B	ANCESTRAL SPECIES	38	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000164658	ENSGT00940000162481
Myomorpha	ANCESTRAL SPECIES	44	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481.a
Muroidea	ANCESTRAL SPECIES	49	ENSGT00390000006753.A.f #7	ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481.a
Muroidea_A	ANCESTRAL SPECIES	29	ENSGT00390000006753.A.f #7	ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481.a
Murinae	ANCESTRAL SPECIES	34	ENSGT00390000006753.A.f #7	ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000160886.o.b.a.a.a	ENSGT00940000162284.e.a.a	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376
Rat	MODERN SPECIES		Isoc2b (ENSRNOG00000016829) #7	Isoc2a (ENSRNOG00000050348) #8	LOC684792 (ENSRNOG00000069979) #9	Nat14 (ENSRNOG00000067958) #10	Nat14 (ENSRNOG00000038622) #11	Ssc5d (ENSRNOG00000016687) #12	Sbk2 (ENSRNOG00000038625) #13	Sbk3 (ENSRNOG00000042927) #14	Zfp579 (ENSRNOG00000016608) #15	Fiz1 (ENSRNOG00000016574) #16	Zfp524 (ENSRNOG00000016565) #17	Znf865 (ENSRNOG00000028628) #18	Zfp865 (ENSRNOG00000016279) #19	Zfp580 (ENSRNOG00000016274) #20	Ccdc106 (ENSRNOG00000015997) #21	U2af2 (ENSRNOG00000015914) #22	Epn1 (ENSRNOG00000015753) #23	Rfpl4a (ENSRNOG00000015743) #24	Rasl2-9 (ENSRNOG00000032913) #25	Vom1r38 (ENSRNOG00000065923) #26	Vom1r37 (ENSRNOG00000038647) #27	Vom1r36 (ENSRNOG00000070755) #28	AABR07038567.1 (ENSRNOG00000047748) #29	LOC120093107 (ENSRNOG00000062966) #30	Vom1r35 (ENSRNOG00000033755) #31	LOC120099328 (ENSRNOG00000068676) #32	Vom1r34 (ENSRNOG00000068548) #33	LOC120099323 (ENSRNOG00000064948) #34	Vom1r39 (ENSRNOG00000070447) #35	Nlrp9 (ENSRNOG00000021913) #36	Vom1r32 (ENSRNOG00000067757) #37
Mus	ANCESTRAL SPECIES		ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557.c #18	ENSGT00530000064557.d #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376	ENSGT00490000044430.a	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481.a.b
Mus_A	ANCESTRAL SPECIES	1	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557.c #18	ENSGT00530000064557.d #18	ENSGT00900000143720	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376	ENSGT00490000044430.a	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481.a.b
Mus_B	ANCESTRAL SPECIES		ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557.c #18	ENSGT00530000064557.d #18	ENSGT00900000143720	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.a.a.a.b.a.a.a.a ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.a.a.a.b.a.a.b ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.a.b ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.a #27	ENSGT00940000162284.e.a.a.a	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794
Mus_C	ANCESTRAL SPECIES	15	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557.c #18	ENSGT00530000064557.d #18	ENSGT00900000143720	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.b ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.a.a.a.b.a.a.a.a ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.a.a.a.b.a.a.b ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.b.a.b ##26	ENSGT01030000234553.b.b.c.a.a.b.b.a.a.a.a.a #27	ENSGT00940000162284.e.a.a.a	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b
spretus	MODERN SPECIES	16	Zfp628 (MGP_SPRETEiJ_G0030188) #11	Nat14 (MGP_SPRETEiJ_G0030189) #10	Ssc5d (MGP_SPRETEiJ_G0030190) #12	Sbk2 (MGP_SPRETEiJ_G0030191) #13	Sbk3 (MGP_SPRETEiJ_G0030192) #14	Zfp579 (MGP_SPRETEiJ_G0030193) #15	Fiz1 (MGP_SPRETEiJ_G0030194) #16	Zfp524 (MGP_SPRETEiJ_G0030195) #17	Zfp865 (MGP_SPRETEiJ_G0030196) #18	MGP_SPRETEiJ_G0030197 #18	MGP_SPRETEiJ_G0030198	Zfp784 (MGP_SPRETEiJ_G0030199) #19	MGP_SPRETEiJ_G0030200 #20	MGP_SPRETEiJ_G0030201 #21	MGP_SPRETEiJ_G0030202 #21	U2af2 (MGP_SPRETEiJ_G0030203) #22	Epn1 (MGP_SPRETEiJ_G0030204) #23	Rfpl4 (MGP_SPRETEiJ_G0030205)	Rasl2-9 (MGP_SPRETEiJ_G0030206) #25	MGP_SPRETEiJ_G0030207 ##26	MGP_SPRETEiJ_G0030208 ##26	Nlrp2 (MGP_SPRETEiJ_G0030209)	Gm5065 (MGP_SPRETEiJ_G0030210)	MGP_SPRETEiJ_G0030211 ##26	Vmn1r65 (MGP_SPRETEiJ_G0030212) #27	Nlrp4c (MGP_SPRETEiJ_G0030213)	Zfp787 (MGP_SPRETEiJ_G0030214)	Zfp444 (MGP_SPRETEiJ_G0030215)	Galp (MGP_SPRETEiJ_G0030216)	Zscan5b (MGP_SPRETEiJ_G0030217)	Epp13 (MGP_SPRETEiJ_G0030218)
Steppe mouse	MODERN SPECIES	2355	Isoc2a (ENSMSIG00000013315) #8	Gm36210 (ENSMSIG00000013314) #9	Zfp628 (ENSMSIG00000013306) #11	Nat14 (ENSMSIG00000013294) #10	Ssc5d (ENSMSIG00000013210) #12	Sbk2 (ENSMSIG00000013178) #13	Sbk3 (ENSMSIG00000013159) #14	Zfp579 (ENSMSIG00000013153) #15	Fiz1 (ENSMSIG00000013090) #16	Zfp524 (ENSMSIG00000013074) #17	ENSMSIG00000013063 #18	ENSMSIG00000013054	Zfp784 (ENSMSIG00000013038) #19	Zfp580 (ENSMSIG00000013023) #20	Ccdc106 (ENSMSIG00000012988) #21	U2af2 (ENSMSIG00000012917) #22	Epn1 (ENSMSIG00000012854) #23	Rfpl4 (ENSMSIG00000012826)	Rasl2-9 (ENSMSIG00000012818) #25	Vmn1r55 (ENSMSIG00000012807) ##26
Mouse	MODERN SPECIES	16	Isoc2a (ENSMUSG00000086784) #8	Gm36210 (ENSMUSG00000110221) #9	Zfp628 (ENSMUSG00000074406) #11	Nat14 (ENSMUSG00000035285) #10	Ssc5d (ENSMUSG00000035279) #12	Sbk2 (ENSMUSG00000030433) #13	Sbk3 (ENSMUSG00000085272) #14	Zfp579 (ENSMUSG00000051550) #15	Fiz1 (ENSMUSG00000061374) #16	Zfp524 (ENSMUSG00000051184) #17	Gm44973 (ENSMUSG00000109129)	Zfp865 (ENSMUSG00000074405) #18	Ccdc106 (ENSMUSG00000035228) #21	Zfp784 (ENSMUSG00000043290) #19	Zfp580 (ENSMUSG00000055633) #20	U2af2 (ENSMUSG00000030435) #22	Epn1 (ENSMUSG00000035203) #23	Rfpl4 (ENSMUSG00000035191)	Rasl2-9 (ENSMUSG00000083649) #25	Vmn1r55 (ENSMUSG00000118215) ##26	Vmn1r56 (ENSMUSG00000091874) ##26	Vmn1r57 (ENSMUSG00000091652) ##26	Nlrp2 (ENSMUSG00000035177)	Gm5065 (ENSMUSG00000048398)	Vmn1r58 (ENSMUSG00000078808) ##26	Vmn1r59 (ENSMUSG00000117744) ##26	Vmn2r28 (ENSMUSG00000066820)	Vmn1r60 (ENSMUSG00000118298) ##26	Vmn1r61 (ENSMUSG00000117863) ##26	Vmn1r62 (ENSMUSG00000092579) ##26	Vmn1r63 (ENSMUSG00000058631) ##26
Ryukyu mouse	MODERN SPECIES	16	Zfp628 (MGP_CAROLIEiJ_G0029135) #11	Nat14 (MGP_CAROLIEiJ_G0029136) #10	Ssc5d (MGP_CAROLIEiJ_G0029137) #12	Sbk2 (MGP_CAROLIEiJ_G0029138) #13	Sbk3 (MGP_CAROLIEiJ_G0029139) #14	Zfp579 (MGP_CAROLIEiJ_G0029140) #15	Fiz1 (MGP_CAROLIEiJ_G0029141) #16	Zfp524 (MGP_CAROLIEiJ_G0029142) #17	Zfp865 (MGP_CAROLIEiJ_G0029143) #18	MGP_CAROLIEiJ_G0029144 #18	MGP_CAROLIEiJ_G0029145	Zfp784 (MGP_CAROLIEiJ_G0029146) #19	MGP_CAROLIEiJ_G0029147 #20	MGP_CAROLIEiJ_G0029148 #21	MGP_CAROLIEiJ_G0029149 #21	U2af2 (MGP_CAROLIEiJ_G0029150) #22	Epn1 (MGP_CAROLIEiJ_G0029151) #23	MGP_CAROLIEiJ_G0029152	Zfp787 (MGP_CAROLIEiJ_G0029153)	Zfp444 (MGP_CAROLIEiJ_G0029154)	Galp (MGP_CAROLIEiJ_G0029155)	Zscan5b (MGP_CAROLIEiJ_G0029156)	Epp13 (MGP_CAROLIEiJ_G0029157)	Zfp667 (MGP_CAROLIEiJ_G0029158)	Zfp583 (MGP_CAROLIEiJ_G0029159)	MGP_CAROLIEiJ_G0029160	Zfp28 (MGP_CAROLIEiJ_G0029161)	Smim17 (MGP_CAROLIEiJ_G0029162)	MGP_CAROLIEiJ_G0029163	Or2bd2 (MGP_CAROLIEiJ_G0029164)	MGP_CAROLIEiJ_G0029165
Shrew mouse	MODERN SPECIES	10	Isoc2b (MGP_PahariEiJ_G0021002) #7	Zfp628 (MGP_PahariEiJ_G0021003) #11	Nat14 (MGP_PahariEiJ_G0021004) #10	Ssc5d (MGP_PahariEiJ_G0021005) #12	Sbk2 (MGP_PahariEiJ_G0021006) #13	Sbk3 (MGP_PahariEiJ_G0021007) #14	Zfp579 (MGP_PahariEiJ_G0021008) #15	MGP_PahariEiJ_G0021009 #16	Zfp524 (MGP_PahariEiJ_G0021010) #17	Zfp865 (MGP_PahariEiJ_G0021011) #18	MGP_PahariEiJ_G0021012 #18	Zfp784 (MGP_PahariEiJ_G0021013) #19	MGP_PahariEiJ_G0021014 #20	MGP_PahariEiJ_G0021015 #21	MGP_PahariEiJ_G0021016 #21	U2af2 (MGP_PahariEiJ_G0021017) #22	Epn1 (MGP_PahariEiJ_G0021018) #23	Rfpl4 (MGP_PahariEiJ_G0021019)	MGP_PahariEiJ_G0021020 ##25	Vmn1r55 (MGP_PahariEiJ_G0021021) ##26	Zfp787 (MGP_PahariEiJ_G0021022)	Zfp444 (MGP_PahariEiJ_G0021023)	MGP_PahariEiJ_G0021024	Zscan5b (MGP_PahariEiJ_G0021025)	MGP_PahariEiJ_G0021026	Zfp667 (MGP_PahariEiJ_G0021027)	MGP_PahariEiJ_G0021028	Zfp78 (MGP_PahariEiJ_G0021029)	Zfp28 (MGP_PahariEiJ_G0021030)	Smim17 (MGP_PahariEiJ_G0021031)	MGP_PahariEiJ_G0021032
Cricetidae	ANCESTRAL SPECIES	32	ENSGT00390000006753.A.f #7	ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000165333	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT01060000248581.C.a.b.a.b
Cricetidae_B	ANCESTRAL SPECIES	52	ENSGT00390000006753.A.f #7	ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.d	ENSGT01030000234553.b.b.c.a.a.a #33	ENSGT00940000162284	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794
Prairie vole	DUPLICATION
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	360	Map7d2 (ENSMOCG00000019149)	Bclaf3 (ENSMOCG00000005833)	Sh3kbp1 (ENSMOCG00000020425)	Map3k15 (ENSMOCG00000013071)	Pdha1 (ENSMOCG00000002601)	Adgrg2 (ENSMOCG00000011315)	Phka2 (ENSMOCG00000021208)	Ppef1 (ENSMOCG00000019014)	Rs1 (ENSMOCG00000012992)	Cdkl5 (ENSMOCG00000014110)	Scml2 (ENSMOCG00000004081)	Bend2 (ENSMOCG00000002447)	Rai2 (ENSMOCG00000020088)	Nhs (ENSMOCG00000016164)	ENSMOCG00000006840	ENSMOCG00000001018 #22	Reps2 (ENSMOCG00000007173)	Rbbp7 (ENSMOCG00000019533)	ENSMOCG00000007235	Syap1 (ENSMOCG00000003662)	S100g (ENSMOCG00000002934)	Ctps2 (ENSMOCG00000020300)	ENSMOCG00000012658	ENSMOCG00000009641	Grpr (ENSMOCG00000013048)	Ap1s2 (ENSMOCG00000014144)	ENSMOCG00000011340	Car5b (ENSMOCG00000016989)	ENSMOCG00000014718	Cltrn (ENSMOCG00000022502)	Ace2 (ENSMOCG00000012386)
Prairie vole	MODERN SPECIES	200																ENSMOCG00000007227 #22
Prairie vole	MODERN SPECIES	130	Shisa7 (ENSMOCG00000002160)	Isoc2b (ENSMOCG00000014429) #7	Isoc2a (ENSMOCG00000000175) #8	Gm36210 (ENSMOCG00000008673) #9	Zfp628 (ENSMOCG00000020296) #11	Nat14 (ENSMOCG00000002976) #10	Ssc5d (ENSMOCG00000013013) #12	Sbk2 (ENSMOCG00000009546) #13	Sbk3 (ENSMOCG00000015804) #14	Zfp579 (ENSMOCG00000000742) #15	Fiz1 (ENSMOCG00000012770) #16	Zfp524 (ENSMOCG00000012047) #17	Zfp784 (ENSMOCG00000009299) #19	Zfp580 (ENSMOCG00000001837) #20	Ccdc106 (ENSMOCG00000019040) #21	ENSMOCG00000013214 #22	Epn1 (ENSMOCG00000002431) #23	ENSMOCG00000012745 #36	ENSMOCG00000019220 #33	ENSMOCG00000000640	Nlrp5 (ENSMOCG00000010782)	Zfp787 (ENSMOCG00000002278)	Zfp444 (ENSMOCG00000020063)	Galp (ENSMOCG00000013003)	ENSMOCG00000016395	Zfp667 (ENSMOCG00000008373)	Zfp583 (ENSMOCG00000016305)	Zfp78 (ENSMOCG00000020903)	Zfp28 (ENSMOCG00000014357)	Smim17 (ENSMOCG00000018336)	Or6z3 (ENSMOCG00000022458)
Northern American deer mouse	MODERN SPECIES		Isoc2b (ENSPEMG00000023204) #7	Isoc2a (ENSPEMG00000011522) #8	Gm36210 (ENSPEMG00000007566) #9	Zfp628 (ENSPEMG00000009113) #11	Nat14 (ENSPEMG00000026040) #10	Ssc5d (ENSPEMG00000024246) #12	Sbk2 (ENSPEMG00000023715) #13	Sbk3 (ENSPEMG00000015238) #14	Zfp579 (ENSPEMG00000023581) #15	Fiz1 (ENSPEMG00000025313) #16	Zfp524 (ENSPEMG00000023517) #17	Zfp865 (ENSPEMG00000007237) #18	Zfp784 (ENSPEMG00000028987) #19	Zfp580 (ENSPEMG00000025748) #20	Ccdc106 (ENSPEMG00000010589) #21	U2af2 (ENSPEMG00000007378) #22	Epn1 (ENSPEMG00000022960) #23	ENSPEMG00000023695 #24	ENSPEMG00000022809 #36	ENSPEMG00000026573 ##26	ENSPEMG00000029506 ##26	ENSPEMG00000024379 ##26	ENSPEMG00000024334 ##26	ENSPEMG00000028124 ##26	ENSPEMG00000025559 ##26	ENSPEMG00000027301 ##26	ENSPEMG00000031370 ##26	ENSPEMG00000031285 #33	ENSPEMG00000028252 ##26	ENSPEMG00000030840 ##26	ENSPEMG00000029984 ##26
Cricetinae	ANCESTRAL SPECIES	41	ENSGT00390000006753.A.f #7	ENSGT00390000006753.A.e #8	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT01030000234553.b.b.c.a.a.a #33	ENSGT00940000163218.d #36	ENSGT00940000162284	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000165333	ENSGT00940000162376
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	291	Isoc2b (ENSCGRG00001001738) #7	Isoc2a (ENSCGRG00001021232) #8	Gm36210 (ENSCGRG00001020139) #9	Zfp628 (ENSCGRG00001019468) #11	Nat14 (ENSCGRG00001018762) #10	Ssc5d (ENSCGRG00001015562) #12	Sbk2 (ENSCGRG00001014118) #13	Sbk3 (ENSCGRG00001011941) #14	Zfp579 (ENSCGRG00001001604) #15	Fiz1 (ENSCGRG00001007623) #16	Zfp524 (ENSCGRG00001000738) #17	Zfp865 (ENSCGRG00001013598) #18	Zfp784 (ENSCGRG00001013279) #19	Zfp580 (ENSCGRG00001004034) #20	Ccdc106 (ENSCGRG00001009438) #21	ENSCGRG00001003185 #22	Epn1 (ENSCGRG00001020990) #23	ENSCGRG00001020118 #24	ENSCGRG00001000724 #33	ENSCGRG00001016226 #36	ENSCGRG00001015079	ENSCGRG00001013596	ENSCGRG00001009784	Nlrp5 (ENSCGRG00001001854)	Zfp787 (ENSCGRG00001000277)	Zfp444 (ENSCGRG00001023269)	Galp (ENSCGRG00001023012)	ENSCGRG00001022794	Zfp667 (ENSCGRG00001022447)	Zfp583 (ENSCGRG00001021592)	ENSCGRG00001021236
Chinese hamster chok1gshd	MODERN SPECIES	1	ENSCGRG00001024656	Arrdc3 (ENSCGRG00001024801)	ENSCGRG00001024885	ENSCGRG00001020880	ENSCGRG00001017247	Lysmd3 (ENSCGRG00001004064)	ENSCGRG00001004958	Mblac2 (ENSCGRG00001018393)	Cetn3 (ENSCGRG00001000920)	ENSCGRG00001003095	ENSCGRG00001007435	Mef2c (ENSCGRG00001006934)	Tmem161b (ENSCGRG00001023931)	Ccnh (ENSCGRG00001024363)	Rasa1 (ENSCGRG00001024641)	ENSCGRG00001007486 #22	Cox7c (ENSCGRG00001016442)	ENSCGRG00001000944	ENSCGRG00001002366	Edil3 (ENSCGRG00001004897)	Hapln1 (ENSCGRG00001024344)	ENSCGRG00001014126	Xrcc4 (ENSCGRG00001022340)	Tmem167 (ENSCGRG00001013866)	Atp6ap1l (ENSCGRG00001003786)	Rps23 (ENSCGRG00001005361)	Atg10 (ENSCGRG00001012356)	Ssbp2 (ENSCGRG00001010940)	Acot12 (ENSCGRG00001010985)	Zcchc9 (ENSCGRG00001018367)	Ckmt2 (ENSCGRG00001019134)
Golden Hamster	MODERN SPECIES	780	Shisa7 (ENSMAUG00000019580)	Isoc2b (ENSMAUG00000014693) #7	Isoc2a (ENSMAUG00000015826) #8	Gm36210 (ENSMAUG00000000539) #9	Zfp628 (ENSMAUG00000003007) #11	Nat14 (ENSMAUG00000001020) #10	Ssc5d (ENSMAUG00000005073) #12	Sbk2 (ENSMAUG00000017604) #13	Sbk3 (ENSMAUG00000013198) #14	Zfp579 (ENSMAUG00000016701) #15	Fiz1 (ENSMAUG00000020653) #16	Zfp524 (ENSMAUG00000004637) #17	Zfp784 (ENSMAUG00000005232) #19	Zfp580 (ENSMAUG00000020477) #20	ENSMAUG00000020945	U2af2 (ENSMAUG00000008180) #22	Epn1 (ENSMAUG00000009109) #23	ENSMAUG00000008844 #36	ENSMAUG00000020207
Upper Galilee mountains blind mole rat	MODERN SPECIES	1343	Gm36210 (ENSNGAG00000014245) #9	Zfp628 (ENSNGAG00000012888) #11	Nat14 (ENSNGAG00000011835) #10	Ssc5d (ENSNGAG00000011192) #12	ENSNGAG00000014744	Sbk2 (ENSNGAG00000000149) #13	ENSNGAG00000020724	Zfp579 (ENSNGAG00000014667) #15	Fiz1 (ENSNGAG00000017096) #16	Zfp524 (ENSNGAG00000012292) #17	Zfp865 (ENSNGAG00000016004) #18	Zfp784 (ENSNGAG00000011802) #19	Zfp580 (ENSNGAG00000003626) #20	ENSNGAG00000014996	ENSNGAG00000014427 #21	U2af2 (ENSNGAG00000020369) #22	Epn1 (ENSNGAG00000019737) #23	ENSNGAG00000000402 #26	ENSNGAG00000019176 #36	ENSNGAG00000017777 #26	ENSNGAG00000000842	Nlrp5 (ENSNGAG00000017882)	ENSNGAG00000011946	Zfp444 (ENSNGAG00000011670)	Galp (ENSNGAG00000010881)	ENSNGAG00000004867	Epp13 (ENSNGAG00000018368)	ENSNGAG00000004669	ENSNGAG00000003567	Zfp583 (ENSNGAG00000002021)	Gm3854 (ENSNGAG00000000088)
Lesser Egyptian jerboa	MODERN SPECIES	276				Zfp628 (ENSJJAG00000000983) #11	Nat14 (ENSJJAG00000000301) #10	Ssc5d (ENSJJAG00000019889) #12	Sbk2 (ENSJJAG00000002104) #13	Sbk3 (ENSJJAG00000001406) #14	Zfp579 (ENSJJAG00000001015) #15	Fiz1 (ENSJJAG00000018865) #16	Zfp524 (ENSJJAG00000018662) #17	Zfp865 (ENSJJAG00000011934) #18	Zfp784 (ENSJJAG00000018599) #19	ENSJJAG00000011855 #20	Ccdc106 (ENSJJAG00000017000) #21	U2af2 (ENSJJAG00000017705) #22	ENSJJAG00000017243 #23
Kangaroo rat	MODERN SPECIES	508	Il11 (ENSDORG00000012806)	Tmem190 (ENSDORG00000012807)	Rpl28 (ENSDORG00000012809)	ENSDORG00000012810	Shisa7 (ENSDORG00000026157)	ENSDORG00000012815 #7	Zfp628 (ENSDORG00000000876) #11	Nat14 (ENSDORG00000000878) #10	Ssc5d (ENSDORG00000000879) #12	Sbk2 (ENSDORG00000000880) #13	ENSDORG00000025623	ENSDORG00000003689 #16	Zfp865 (ENSDORG00000023200) #18	Zfp784 (ENSDORG00000027387) #19	Ccdc106 (ENSDORG00000003249) #21	U2af2 (ENSDORG00000003250) #22	ENSDORG00000003254 #23	ENSDORG00000025700	Zfp444 (ENSDORG00000028738)	Zfp583 (ENSDORG00000004636)	Zfp78 (ENSDORG00000027442)	ENSDORG00000025457	ENSDORG00000023357	Peg3 (ENSDORG00000026369)	ENSDORG00000012964	Zik1 (ENSDORG00000027065)
Rodentia_A	ANCESTRAL SPECIES	28	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000162284	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00940000163087	ENSGT00940000163774	ENSGT00490000044430
Hystricomorpha	ANCESTRAL SPECIES	2	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT01000000216607	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000162284	ENSGT00910000145073	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00940000163087	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481	ENSGT00940000164658	ENSGT00940000163437
Hystricomorpha_a	ANCESTRAL SPECIES	33	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT01000000216607	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481	ENSGT00940000164658
Hystricomorpha_b	ANCESTRAL SPECIES	88	ENSGT00390000008732.a.a.b.a.b	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00910000144307 #11	ENSGT01000000216607	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000163198 #17	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000162284	ENSGT00910000145073	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00490000044430	ENSGT01090000260044.A.a.b.b.d	ENSGT00940000162481	ENSGT00940000164658
Degu	DUPLICATION
Degu	MODERN SPECIES	361	ENSODEG00000010391	ENSODEG00000011615	ISOC2 (ENSODEG00000010105) #7	C19orf85 (ENSODEG00000011049) #9	SHISA7 (ENSODEG00000010663)	ZNF628 (ENSODEG00000009941) #11	ENSODEG00000010952	SSC5D (ENSODEG00000009970) #12	SBK2 (ENSODEG00000010236) #13	ENSODEG00000010550	ZNF579 (ENSODEG00000013209) #15	ZNF524 (ENSODEG00000011352) #17	ZNF784 (ENSODEG00000011185) #19	ZNF580 (ENSODEG00000010519) #20	CCDC106 (ENSODEG00000010620) #21	ENSODEG00000012729 #22	ENSODEG00000012006 #23
Degu	MODERN SPECIES	181	ENSODEG00000008694	TRIM33 (ENSODEG00000006822)	ENSODEG00000006967	SYT6 (ENSODEG00000007291)	OLFML3 (ENSODEG00000006727)	HIPK1 (ENSODEG00000007245)	ENSODEG00000007048	AP4B1 (ENSODEG00000008168)	BCL2L15 (ENSODEG00000008721)	ENSODEG00000007130	RSBN1 (ENSODEG00000007878)	ENSODEG00000008326	PHTF1 (ENSODEG00000007432)	MAGI3 (ENSODEG00000007160)	ENSODEG00000019722	ENSODEG00000009254 #22	LRIG2 (ENSODEG00000012585)	SLC16A1 (ENSODEG00000007835)	TAFA3 (ENSODEG00000009074)	PPM1J (ENSODEG00000007627)	ENSODEG00000008244	MOV10 (ENSODEG00000010401)	ENSODEG00000007252	ST7L (ENSODEG00000007468)	WNT2B (ENSODEG00000008783)	CTTNBP2NL (ENSODEG00000008068)	KCND3 (ENSODEG00000008613)	ENSODEG00000007653	INKA2 (ENSODEG00000009526)	ENSODEG00000008652	ENSODEG00000007477
Long-tailed chinchilla	MODERN SPECIES	274	RPL28 (ENSCLAG00000000684)	UBE2S (ENSCLAG00000000649)	ENSCLAG00000000623	ISOC2 (ENSCLAG00000000572) #7	NAT14 (ENSCLAG00000000540) #10	ZNF628 (ENSCLAG00000000533) #11	SSC5D (ENSCLAG00000000276) #12	SBK2 (ENSCLAG00000000598) #13	ENSCLAG00000000506	ENSCLAG00000000471	ZNF524 (ENSCLAG00000001761) #17	ENSCLAG00000001678	ZNF784 (ENSCLAG00000001598) #19	ZNF580 (ENSCLAG00000001501) #20	CCDC106 (ENSCLAG00000001019) #21	U2AF2 (ENSCLAG00000000596) #22	EPN1 (ENSCLAG00000000459) #23	NLRP4 (ENSCLAG00000000178)	ENSCLAG00000000980	ZNF667 (ENSCLAG00000000888)	ZNF583 (ENSCLAG00000000841)	ENSCLAG00000000758	ZFP28 (ENSCLAG00000000617)	SMIM17 (ENSCLAG00000000536)	ENSCLAG00000000528	ENSCLAG00000017439	ENSCLAG00000000453	ENSCLAG00000000437
Guinea pig	MODERN SPECIES	175								SBK2 (ENSCPOG00000022847) #13	ZNF579 (ENSCPOG00000026374) #15	FIZ1 (ENSCPOG00000038015) #16	ZNF524 (ENSCPOG00000019987) #17	ZNF865 (ENSCPOG00000040579) #18	ZNF784 (ENSCPOG00000039249) #19	ZNF580 (ENSCPOG00000019582) #20	CCDC106 (ENSCPOG00000000131) #21	U2AF2 (ENSCPOG00000001582) #22	ENSCPOG00000008749 #23	ZNF787 (ENSCPOG00000037493)	ZNF667 (ENSCPOG00000031846)	ZNF583 (ENSCPOG00000031072)	ENSCPOG00000032242	ZFP28 (ENSCPOG00000013819)	SMIM17 (ENSCPOG00000019735)	ENSCPOG00000030066	ENSCPOG00000022073	ENSCPOG00000037012	AURKC (ENSCPOG00000012661)	ENSCPOG00000037779	ENSCPOG00000037954	ENSCPOG00000040670	ZNF550 (ENSCPOG00000032567)
Sciuridae	ANCESTRAL SPECIES	39	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000162284	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00940000163774	ENSGT00490000044430	ENSGT00950000183055.a.a.d
Marmotini	ANCESTRAL SPECIES	48	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000162284	ENSGT00910000145073	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048	ENSGT00390000021477	ENSGT00940000161925.b	ENSGT00940000162794	ENSGT00940000162376	ENSGT00940000163774	ENSGT00490000044430	ENSGT00950000183055.a.a.d	ENSGT01090000260044.A.a.b.b.d
Alpin marmot	MODERN SPECIES	104	COX6B2 (ENSMMMG00000001696)	ENSMMMG00000001685	IL11 (ENSMMMG00000001672)	RPL28 (ENSMMMG00000001659)	UBE2S (ENSMMMG00000001622)	ISOC2 (ENSMMMG00000001585) #7	C19orf85 (ENSMMMG00000001567) #9	NAT14 (ENSMMMG00000001549) #10	ENSMMMG00000001536 #12	SBK2 (ENSMMMG00000001514) #13	ZNF524 (ENSMMMG00000001464) #17	ENSMMMG00000001452 #18	ZNF784 (ENSMMMG00000001421) #19	ZNF581 (ENSMMMG00000001405)	CCDC106 (ENSMMMG00000001388) #21	U2AF2 (ENSMMMG00000001333) #22	EPN1 (ENSMMMG00000001239) #23	ENSMMMG00000000997	ENSMMMG00000000965	ZNF444 (ENSMMMG00000000925)	ENSMMMG00000000903	ENSMMMG00000000875	ENSMMMG00000000857	ENSMMMG00000000559	SMIM17 (ENSMMMG00000000519)	ENSMMMG00000000510	ENSMMMG00000000472	ENSMMMG00000000429	ENSMMMG00000000408	ENSMMMG00000000370	PEG3 (ENSMMMG00000000335)
Marmotini_b	ANCESTRAL SPECIES	114	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163064	ENSGT00940000162893
Squirrel	MODERN SPECIES	556							ENSSTOG00000028089	ENSSTOG00000023869	ZNF579 (ENSSTOG00000020940) #15	FIZ1 (ENSSTOG00000013441) #16	ZNF524 (ENSSTOG00000001503) #17	ZNF865 (ENSSTOG00000025586) #18	ZNF784 (ENSSTOG00000000887) #19	ZNF580 (ENSSTOG00000025235) #20	CCDC106 (ENSSTOG00000015914) #21	U2AF2 (ENSSTOG00000019595) #22	EPN1 (ENSSTOG00000025659) #23	ZNF787 (ENSSTOG00000028658)	ZNF444 (ENSSTOG00000024137)
Arctic ground squirrel	MODERN SPECIES	831	UBE2S (ENSUPAG00010002148)	SHISA7 (ENSUPAG00010002124)	ISOC2 (ENSUPAG00010002103) #7	C19orf85 (ENSUPAG00010002098) #9	ZNF628 (ENSUPAG00010002095) #11	NAT14 (ENSUPAG00010002087) #10	SSC5D (ENSUPAG00010002073) #12	SBK2 (ENSUPAG00010002061) #13	SBK3 (ENSUPAG00010002041) #14	ZNF579 (ENSUPAG00010002036) #15	FIZ1 (ENSUPAG00010001988) #16	ZNF524 (ENSUPAG00010001979) #17	ZNF865 (ENSUPAG00010001973) #18	ZNF784 (ENSUPAG00010001966) #19	CCDC106 (ENSUPAG00010001948) #21	U2AF2 (ENSUPAG00010001919) #22	EPN1 (ENSUPAG00010001854) #23	ENSUPAG00010001817 #24
Eurasian red squirrel	MODERN SPECIES	8	ISOC2 (ENSSVLG00005023878) #7	C19orf85 (ENSSVLG00005023926) #9	ZNF628 (ENSSVLG00005023955) #11	NAT14 (ENSSVLG00005023966) #10	SSC5D (ENSSVLG00005023992) #12	SBK2 (ENSSVLG00005024029) #13	SBK3 (ENSSVLG00005024048) #14	ZNF579 (ENSSVLG00005024071) #15	FIZ1 (ENSSVLG00005024089) #16	ZNF524 (ENSSVLG00005024107) #17	ZNF865 (ENSSVLG00005024120) #18	ZNF784 (ENSSVLG00005024128) #19	ZNF580 (ENSSVLG00005024147) #20	ZNF581 (ENSSVLG00005024159)	ENSSVLG00005024180 #21	U2AF2 (ENSSVLG00005024235) #22	EPN1 (ENSSVLG00005024293) #23	ENSSVLG00005024345	ENSSVLG00005024379	ENSSVLG00005024402	ENSSVLG00005024481	NLRP5 (ENSSVLG00005024723)	ZNF787 (ENSSVLG00005024784)	ZNF444 (ENSSVLG00005024806)	ENSSVLG00005024850	EDDM13 (ENSSVLG00005024895)	ENSSVLG00005024938	ENSSVLG00005024972	ZNF71 (ENSSVLG00005025063)	ZFP28 (ENSSVLG00005025178)	ENSSVLG00005025199
Lagomorpha	ANCESTRAL SPECIES																	ENSGT00940000155556.d #22
Pika	MODERN SPECIES	1823																ENSOPRG00000006138 #22
Tree shrew	MODERN SPECIES	2379																U2AF2 (ENSTBEG00000009104) #22
Primates	ANCESTRAL SPECIES	15	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.d	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00510000055233
Strepsirrhini	DUPLICATION
Strepsirrhini	ANCESTRAL SPECIES	16	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d.k #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.d	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163909
Lemuriformes	ANCESTRAL SPECIES	15	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d.k #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.d	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163909	ENSGT01080000257333.A.a.b.a.b.b.b.e	ENSGT01080000257333.A.a.b.a.b.a.a.a.d.a	ENSGT00390000001041	ENSGT01020000230389.b.a.b.d.a.b.b	ENSGT01030000234551.k.d.a.d.a.a	ENSGT01020000230389.b.a.b.d.b.b	ENSGT01020000230389.b.a.b.d.b.a.a.b
Lemuriformes_a	ANCESTRAL SPECIES	5	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d.k #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163635	ENSGT00940000162284	ENSGT01080000257333.A.a.b.a.b.b.b.e	ENSGT01080000257333.A.a.b.a.b.a.a.a.d.a	ENSGT00390000001041	ENSGT01020000230389.b.a.b.d.a.b.b	ENSGT01030000234551.k.d.a.d.a.a	ENSGT01020000230389.b.a.b.d.b.b	ENSGT01020000230389.b.a.b.d.b.a.a.b	ENSGT00930000151066	ENSGT00940000162323	ENSGT01020000230389.b.a.b.d.b.a.a.a.a	ENSGT01020000230389.b.a.b.d.a.a
Coquerels sifaka	MODERN SPECIES	280	SHISA7 (ENSPCOG00000020413)	ISOC2 (ENSPCOG00000014590) #7	C19orf85 (ENSPCOG00000024988) #9	ZNF628 (ENSPCOG00000026399) #11	NAT14 (ENSPCOG00000000924) #10	SSC5D (ENSPCOG00000016555) #12	SBK2 (ENSPCOG00000012152) #13	ENSPCOG00000018023	ZNF579 (ENSPCOG00000013885) #15	FIZ1 (ENSPCOG00000016178) #16	ZNF524 (ENSPCOG00000004661) #17	ENSPCOG00000015260	ZNF784 (ENSPCOG00000025157) #19	ZNF580 (ENSPCOG00000013009) #20	CCDC106 (ENSPCOG00000023920) #21	U2AF2 (ENSPCOG00000025870) #22	EPN1 (ENSPCOG00000013086) #23	NLRP11 (ENSPCOG00000003852)	ENSPCOG00000022907	ENSPCOG00000019433	ENSPCOG00000005090	ENSPCOG00000011654	CTU1 (ENSPCOG00000022842)	KLK14 (ENSPCOG00000020019)	KLK13 (ENSPCOG00000017297)	KLK12 (ENSPCOG00000016175)	KLK11 (ENSPCOG00000020564)	KLK10 (ENSPCOG00000014380)	KLK9 (ENSPCOG00000026836)	KLK8 (ENSPCOG00000012045)	KLK7 (ENSPCOG00000016123)
Greater bamboo lemur	MODERN SPECIES	352	UBE2S (ENSPSMG00000007739)	SHISA7 (ENSPSMG00000007752)	ISOC2 (ENSPSMG00000007787) #7	C19orf85 (ENSPSMG00000007802) #9	ZNF628 (ENSPSMG00000007804) #11	NAT14 (ENSPSMG00000007815) #10	SSC5D (ENSPSMG00000007856) #12	SBK2 (ENSPSMG00000007869) #13	SBK3 (ENSPSMG00000007878) #14	FIZ1 (ENSPSMG00000007888) #16	ZNF524 (ENSPSMG00000007895) #17	ZNF865 (ENSPSMG00000007900) #18	ZNF784 (ENSPSMG00000007905) #19	ZNF580 (ENSPSMG00000007910) #20	CCDC106 (ENSPSMG00000007956) #21	U2AF2 (ENSPSMG00000008058) #22	EPN1 (ENSPSMG00000008134) #23	ENSPSMG00000008142 #24	ENSPSMG00000008156	ENSPSMG00000008165	ENSPSMG00000008179	ENSPSMG00000008186	NLRP9 (ENSPSMG00000008199) #36	ENSPSMG00000008204	ENSPSMG00000008224 #24	NLRP11 (ENSPSMG00000008267)	NLRP4 (ENSPSMG00000008301)
Mouse lemur	MODERN SPECIES	14	UBE2S (ENSMICG00000043168)	SHISA7 (ENSMICG00000034597)	ISOC2 (ENSMICG00000036123) #7	C19orf85 (ENSMICG00000044148) #9	NAT14 (ENSMICG00000027142) #10	SSC5D (ENSMICG00000032306) #12	SBK2 (ENSMICG00000033482) #13	SBK3 (ENSMICG00000041688) #14	ZNF579 (ENSMICG00000036159) #15	FIZ1 (ENSMICG00000030826) #16	ZNF524 (ENSMICG00000029589) #17	ENSMICG00000044284	ZNF784 (ENSMICG00000035058) #19	ZNF580 (ENSMICG00000044200) #20	CCDC106 (ENSMICG00000030139) #21	U2AF2 (ENSMICG00000027681) #22	EPN1 (ENSMICG00000030667) #23	ENSMICG00000031661	ENSMICG00000042403	ENSMICG00000045244	ENSMICG00000036846	CXCL17 (ENSMICG00000047306)	LIPE (ENSMICG00000015308)	CNFN (ENSMICG00000041430)	MEGF8 (ENSMICG00000015225)	TMEM145 (ENSMICG00000015206)	PRR19 (ENSMICG00000015202)	CIC (ENSMICG00000030301)	PAFAH1B3 (ENSMICG00000015196)	ERF (ENSMICG00000004694)	GSK3A (ENSMICG00000046754)
Bushbaby	MODERN SPECIES	379	SHISA7 (ENSOGAG00000027087)	ISOC2 (ENSOGAG00000014689) #7	ZNF628 (ENSOGAG00000034730) #11	NAT14 (ENSOGAG00000027146) #10	SSC5D (ENSOGAG00000003685) #12	SBK2 (ENSOGAG00000030651) #13	SBK3 (ENSOGAG00000026956) #14	ZNF579 (ENSOGAG00000011727) #15	FIZ1 (ENSOGAG00000025943) #16	ZNF524 (ENSOGAG00000011731) #17	ZNF865 (ENSOGAG00000029406) #18	ZNF784 (ENSOGAG00000029101) #19	ZNF580 (ENSOGAG00000032491) #20	ZNF581 (ENSOGAG00000031176)	CCDC106 (ENSOGAG00000007204) #21	ENSOGAG00000007206 #22	EPN1 (ENSOGAG00000005940) #23	ENSOGAG00000032953	NLRP13 (ENSOGAG00000008458)	ENSOGAG00000031696
Strepsirrhini	ANCESTRAL SPECIES																	ENSGT00940000155556.d.l #22
Bushbaby	MODERN SPECIES	195															ENSOGAG00000026964	ENSOGAG00000034729 #22	ENSOGAG00000005855	NXPH2 (ENSOGAG00000003113)	SPOPL (ENSOGAG00000015187)	HNMT (ENSOGAG00000006550)	THSD7B (ENSOGAG00000017173)	ENSOGAG00000027169	CXCR4 (ENSOGAG00000011319)	DARS1 (ENSOGAG00000005919)	MCM6 (ENSOGAG00000008745)	LCT (ENSOGAG00000002883)	UBXN4 (ENSOGAG00000002877)	R3HDM1 (ENSOGAG00000003136)	ZRANB3 (ENSOGAG00000013307)	RAB3GAP1 (ENSOGAG00000013299)	MAP3K19 (ENSOGAG00000016799)
Haplorrhini	ANCESTRAL SPECIES	16	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597
Tarsier	MODERN SPECIES	2688															CCDC106 (ENSTSYG00000031223) #21	U2AF2 (ENSTSYG00000007432) #22
Simiiformes	ANCESTRAL SPECIES	16	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230	ENSGT00510000055233	ENSGT00940000162794
Platyrrhini	ANCESTRAL SPECIES	36	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.c.a.b	ENSGT00940000163230.c.b	ENSGT00940000163230.c.a.a
Cebidae	ANCESTRAL SPECIES	34	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT01100000264180	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.c.a.b	ENSGT00940000163230.c.b	ENSGT00940000163230.c.a.a
Cebidae_a	ANCESTRAL SPECIES	32	ENSGT00940000157149.e	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT01100000264180	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.c.a.b	ENSGT00940000163230.c.b	ENSGT00940000163230.c.a.a
Capuchin	MODERN SPECIES	190	ENSCCAG00000026054	SHISA7 (ENSCCAG00000004710)	ISOC2 (ENSCCAG00000035051) #7	C19orf85 (ENSCCAG00000030837) #9	ZNF628 (ENSCCAG00000025672) #11	NAT14 (ENSCCAG00000031770) #10	SSC5D (ENSCCAG00000018750) #12	SBK2 (ENSCCAG00000035873) #13	SBK3 (ENSCCAG00000035334) #14	ZNF579 (ENSCCAG00000007302) #15	FIZ1 (ENSCCAG00000030685) #16	ENSCCAG00000028802	ZNF784 (ENSCCAG00000032891) #19	ZNF580 (ENSCCAG00000019200) #20	CCDC106 (ENSCCAG00000015293) #21	U2AF2 (ENSCCAG00000023336) #22	EPN1 (ENSCCAG00000037156) #23	NLRP9 (ENSCCAG00000036833) #36	ENSCCAG00000024831	NLRP11 (ENSCCAG00000030556)	NLRP4 (ENSCCAG00000029314)	NLRP13 (ENSCCAG00000030241)	NLRP8 (ENSCCAG00000037666)	NLRP5 (ENSCCAG00000027175)	ZNF787 (ENSCCAG00000030754)	ZNF444 (ENSCCAG00000019978)	ENSCCAG00000031465	ZSCAN5B (ENSCCAG00000024602)	ENSCCAG00000036576	ENSCCAG00000028957	ENSCCAG00000021033
Bolivian squirrel monkey	MODERN SPECIES	265	ENSSBOG00000028286	ENSSBOG00000031440	SHISA7 (ENSSBOG00000029983)	ISOC2 (ENSSBOG00000021783) #7	C19orf85 (ENSSBOG00000022347) #9	ZNF628 (ENSSBOG00000024067) #11	NAT14 (ENSSBOG00000028759) #10	ENSSBOG00000001435	SSC5D (ENSSBOG00000025635) #12	SBK2 (ENSSBOG00000023586) #13	ENSSBOG00000026549	ENSSBOG00000031474	ENSSBOG00000031492	ZNF580 (ENSSBOG00000008469) #20	CCDC106 (ENSSBOG00000027771) #21	U2AF2 (ENSSBOG00000023891) #22	EPN1 (ENSSBOG00000034319) #23	NLRP9 (ENSSBOG00000020017) #36
Marmoset	MODERN SPECIES	14	UBE2S (ENSCJAG00000068677)	SHISA7 (ENSCJAG00000048648)	ISOC2 (ENSCJAG00000017068) #7	C19orf85 (ENSCJAG00000045714) #9	ZNF628 (ENSCJAG00000040315) #11	NAT14 (ENSCJAG00000041401) #10	SSC5D (ENSCJAG00000017084) #12	SBK2 (ENSCJAG00000017097) #13	SBK3 (ENSCJAG00000079412) #14	ZNF579 (ENSCJAG00000017105) #15	FIZ1 (ENSCJAG00000056979) #16	ZNF784 (ENSCJAG00000017118) #19	ZNF580 (ENSCJAG00000040930) #20	ZNF581 (ENSCJAG00000074810)	CCDC106 (ENSCJAG00000043090) #21	U2AF2 (ENSCJAG00000017128) #22	EPN1 (ENSCJAG00000017140) #23	NLRP9 (ENSCJAG00000017175) #36	ENSCJAG00000044042	NLRP11 (ENSCJAG00000046283)	NLRP4 (ENSCJAG00000008154)	NLRP13 (ENSCJAG00000083359)	NLRP5 (ENSCJAG00000032099)	ZNF787 (ENSCJAG00000020268)	ZNF444 (ENSCJAG00000020269)	GALP (ENSCJAG00000020271)	ZSCAN5B (ENSCJAG00000056730)	ENSCJAG00000081168	ENSCJAG00000085043	ENSCJAG00000057012	ZNF582 (ENSCJAG00000020283)
Mas night monkey	MODERN SPECIES	696	UBE2S (ENSANAG00000031507)	SHISA7 (ENSANAG00000029205)	ISOC2 (ENSANAG00000034167) #7	C19orf85 (ENSANAG00000024756) #9	ZNF628 (ENSANAG00000028064) #11	NAT14 (ENSANAG00000031456) #10	SSC5D (ENSANAG00000032259) #12	SBK2 (ENSANAG00000029395) #13	SBK3 (ENSANAG00000030754) #14	ZNF579 (ENSANAG00000031222) #15	FIZ1 (ENSANAG00000033100) #16	ZNF865 (ENSANAG00000036989) #18	ZNF784 (ENSANAG00000032571) #19	ZNF580 (ENSANAG00000005932) #20	CCDC106 (ENSANAG00000026347) #21	U2AF2 (ENSANAG00000028042) #22	EPN1 (ENSANAG00000027685) #23	NLRP9 (ENSANAG00000019873) #36	NLRP11 (ENSANAG00000025806)	NLRP4 (ENSANAG00000024690)	NLRP13 (ENSANAG00000030630)	NLRP5 (ENSANAG00000037297)	ZNF787 (ENSANAG00000026047)	ZNF444 (ENSANAG00000036445)	GALP (ENSANAG00000028744)	ZSCAN5B (ENSANAG00000035131)	ENSANAG00000035177	ENSANAG00000030428	ENSANAG00000036793	EDDM13 (ENSANAG00000030384)	ZNF582 (ENSANAG00000026033)
Catarrhini	ANCESTRAL SPECIES		ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b	ENSGT00510000055233
Cercopithecidae	ANCESTRAL SPECIES	12	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b
Rhinopithecus	DUPLICATION
Rhinopithecus	ANCESTRAL SPECIES	12	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d.m #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b
Black snub-nosed monkey	MODERN SPECIES	1086	UBE2S (ENSRBIG00000030322)	SHISA7 (ENSRBIG00000043226)	ISOC2 (ENSRBIG00000034315) #7	C19orf85 (ENSRBIG00000028052) #9	ZNF628 (ENSRBIG00000038702) #11	NAT14 (ENSRBIG00000034709) #10	SSC5D (ENSRBIG00000027500) #12	SBK2 (ENSRBIG00000033710) #13	ENSRBIG00000033168	FIZ1 (ENSRBIG00000027949) #16	ZNF524 (ENSRBIG00000010601) #17	ZNF784 (ENSRBIG00000043588) #19	ZNF580 (ENSRBIG00000026309) #20	ZNF581 (ENSRBIG00000006365)	CCDC106 (ENSRBIG00000042327) #21	U2AF2 (ENSRBIG00000041018) #22	EPN1 (ENSRBIG00000002568) #23	NLRP9 (ENSRBIG00000029422) #36	ENSRBIG00000038525	ENSRBIG00000030049	NLRP11 (ENSRBIG00000029104)	NLRP4 (ENSRBIG00000039633)	NLRP13 (ENSRBIG00000029762)	NLRP8 (ENSRBIG00000037433)
Golden snub-nosed monkey	MODERN SPECIES	2140	SHISA7 (ENSRROG00000044620)	ISOC2 (ENSRROG00000041872) #7	C19orf85 (ENSRROG00000042351) #9	ZNF628 (ENSRROG00000039960) #11	NAT14 (ENSRROG00000020816) #10	SSC5D (ENSRROG00000034580) #12	SBK2 (ENSRROG00000037827) #13	SBK3 (ENSRROG00000035533) #14	ZNF579 (ENSRROG00000032774) #15	FIZ1 (ENSRROG00000045219) #16	ZNF524 (ENSRROG00000000770) #17	ZNF784 (ENSRROG00000030364) #19	ZNF580 (ENSRROG00000027250) #20	ZNF581 (ENSRROG00000024270)	CCDC106 (ENSRROG00000035318) #21	ENSRROG00000031103 #22
Rhinopithecus	ANCESTRAL SPECIES																	ENSGT00940000155556.d.n #22
Golden snub-nosed monkey	MODERN SPECIES	1672															ENSRROG00000013973	ENSRROG00000031238 #22	FAM98A (ENSRROG00000037842)	RASGRP3 (ENSRROG00000040645)	LTBP1 (ENSRROG00000041804)	TTC27 (ENSRROG00000045072)	BIRC6 (ENSRROG00000040759)	YIPF4 (ENSRROG00000045556)
Cercopithecinae	ANCESTRAL SPECIES	1	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b
Vervet Monkey	MODERN SPECIES	25	ENSCSAG00000001738	UBE2S (ENSCSAG00000001736)	ISOC2 (ENSCSAG00000001735) #7	ZNF628 (ENSCSAG00000019655) #11	NAT14 (ENSCSAG00000001733) #10	SSC5D (ENSCSAG00000001732) #12	SBK2 (ENSCSAG00000001731) #13	ENSCSAG00000001729	ZNF579 (ENSCSAG00000019656) #15	FIZ1 (ENSCSAG00000001728) #16	ENSCSAG00000001727 #17	ZNF784 (ENSCSAG00000001726) #19	ZNF580 (ENSCSAG00000001725) #20	ZNF581 (ENSCSAG00000019657)	CCDC106 (ENSCSAG00000001724) #21	U2AF2 (ENSCSAG00000001722) #22	EPN1 (ENSCSAG00000001720) #23	ENSCSAG00000001714	ENSCSAG00000001711	ENSCSAG00000001710	ENSCSAG00000001709 #24	NLRP11 (ENSCSAG00000001707)	NLRP4 (ENSCSAG00000001706)	NLRP13 (ENSCSAG00000001693)	NLRP8 (ENSCSAG00000001689)	NLRP5 (ENSCSAG00000001687)	ZNF787 (ENSCSAG00000001683)	ZNF444 (ENSCSAG00000001682)	GALP (ENSCSAG00000001680)	ENSCSAG00000001679	ZSCAN5C (ENSCSAG00000001677)
Cercopithecinae_a	ANCESTRAL SPECIES	23	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b
Macaca	ANCESTRAL SPECIES	12	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.b	ENSGT00510000055233
Macaca_a	ANCESTRAL SPECIES	1	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00950000183686	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000164597	ENSGT00940000163230.a.b	ENSGT00510000055233
Rhesus	MODERN SPECIES	10	RPL28 (ENSMMUG00000015901)	UBE2S (ENSMMUG00000016507)	SHISA7 (ENSMMUG00000042351)	ISOC2 (ENSMMUG00000012704) #7	C19orf85 (ENSMMUG00000064682) #9	NAT14 (ENSMMUG00000052201) #10	SSC5D (ENSMMUG00000005014) #12	SBK2 (ENSMMUG00000056409) #13	SBK3 (ENSMMUG00000004673) #14	ZNF579 (ENSMMUG00000016614) #15	FIZ1 (ENSMMUG00000006773) #16	ZNF524 (ENSMMUG00000006774) #17	ZNF784 (ENSMMUG00000004804) #19	CCDC106 (ENSMMUG00000004808) #21	ZNF581 (ENSMMUG00000004805)	U2AF2 (ENSMMUG00000004810) #22	EPN1 (ENSMMUG00000004811) #23	NLRP9 (ENSMMUG00000029506)	ENSMMUG00000053125	ENSMMUG00000053747	NLRP11 (ENSMMUG00000007988)	NLRP4 (ENSMMUG00000028711)	NLRP13 (ENSMMUG00000016749)	NLRP8 (ENSMMUG00000009935)	NLRP5 (ENSMMUG00000028710)	ENSMMUG00000050283	ZNF787 (ENSMMUG00000022338)	ZNF444 (ENSMMUG00000017498)	ENSMMUG00000054092	ZSCAN5A (ENSMMUG00000015532)	EDDM13 (ENSMMUG00000057093)
Crab-eating macaque	MODERN SPECIES	10	TMEM190 (ENSMFAG00000031628)	ENSMFAG00000043131	UBE2S (ENSMFAG00000001052)	C19orf85 (ENSMFAG00000030392) #9	ENSMFAG00000062328	SSC5D (ENSMFAG00000031455) #12	SBK2 (ENSMFAG00000044159) #13	SBK3 (ENSMFAG00000063518) #14	ENSMFAG00000055885 #15	ENSMFAG00000047570	ZNF524 (ENSMFAG00000023561) #17	ENSMFAG00000059949	ZNF580 (ENSMFAG00000051292) #20	ZNF581 (ENSMFAG00000030060)	CCDC106 (ENSMFAG00000032895) #21	U2AF2 (ENSMFAG00000038383) #22	NLRP9 (ENSMFAG00000031822) #36	ENSMFAG00000038706	ENSMFAG00000044047	NLRP11 (ENSMFAG00000033012)	NLRP4 (ENSMFAG00000042923)	NLRP13 (ENSMFAG00000001862)	NLRP8 (ENSMFAG00000040791)	NLRP5 (ENSMFAG00000038459)	ENSMFAG00000054754	ENSMFAG00000057306	GALP (ENSMFAG00000036569)	ENSMFAG00000061044	ZSCAN5A (ENSMFAG00000044815)	EDDM13 (ENSMFAG00000043238)	ENSMFAG00000035532
Pig-tailed macaque	MODERN SPECIES	143	ISOC2 (ENSMNEG00000040257) #7	C19orf85 (ENSMNEG00000037113) #9	ZNF628 (ENSMNEG00000040894) #11	NAT14 (ENSMNEG00000031578) #10	SSC5D (ENSMNEG00000040780) #12	SBK2 (ENSMNEG00000036467) #13	ENSMNEG00000032374	ZNF579 (ENSMNEG00000011776) #15	FIZ1 (ENSMNEG00000040143) #16	ZNF524 (ENSMNEG00000019307) #17	ZNF865 (ENSMNEG00000038220) #18	ZNF784 (ENSMNEG00000036215) #19	ZNF580 (ENSMNEG00000011425) #20	ZNF581 (ENSMNEG00000008711)	CCDC106 (ENSMNEG00000030340) #21	U2AF2 (ENSMNEG00000042096) #22	EPN1 (ENSMNEG00000037764) #23	NLRP9 (ENSMNEG00000034985) #36	ENSMNEG00000034268	ENSMNEG00000033972	NLRP11 (ENSMNEG00000029737)	NLRP4 (ENSMNEG00000044197)	NLRP13 (ENSMNEG00000041268)	NLRP8 (ENSMNEG00000035245)	NLRP5 (ENSMNEG00000036479)	ZNF787 (ENSMNEG00000040695)	ZNF444 (ENSMNEG00000028729)	GALP (ENSMNEG00000012763)	ZSCAN5B (ENSMNEG00000039908)	ZSCAN5C (ENSMNEG00000037381)	ZSCAN5A (ENSMNEG00000041679)
Cercopithecinae_b	ANCESTRAL SPECIES	39	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000167929	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT01100000267023	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a
Olive baboon	MODERN SPECIES	12	TMEM238 (ENSPANG00000015464)	ENSPANG00000029716	UBE2S (ENSPANG00000048093)	SHISA7 (ENSPANG00000046786)	SBK2 (ENSPANG00000004030) #13	SSC5D (ENSPANG00000013109) #12	ENSPANG00000040327	ZNF628 (ENSPANG00000012246) #11	ZNF579 (ENSPANG00000014917) #15	FIZ1 (ENSPANG00000038504) #16	ZNF524 (ENSPANG00000025646) #17	ZNF865 (ENSPANG00000050597) #18	ZNF784 (ENSPANG00000001785) #19	ENSPANG00000014005	CCDC106 (ENSPANG00000025400) #21	U2AF2 (ENSPANG00000008459) #22	EPN1 (ENSPANG00000003669) #23	ENSPANG00000000348	NLRP11 (ENSPANG00000001784)	NLRP4 (ENSPANG00000014877)	NLRP13 (ENSPANG00000012857)	NLRP8 (ENSPANG00000031320)	NLRP5 (ENSPANG00000030718)	ZNF787 (ENSPANG00000025615)	ZNF444 (ENSPANG00000042535)	ZSCAN5B (ENSPANG00000034824)	ZSCAN5A (ENSPANG00000037940)	EDDM13 (ENSPANG00000010430)	ENSPANG00000004221	ZNF582 (ENSPANG00000000398)	ZNF583 (ENSPANG00000000399)
Cercopithecinae_d	ANCESTRAL SPECIES	43	ENSGT00390000008732.a.b	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000167929	ENSGT00940000163198 #17	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b.g	ENSGT00940000163220.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT01100000267023	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a
Sooty mangabey	MODERN SPECIES	607	ISOC2 (ENSCATG00000032309) #7	C19orf85 (ENSCATG00000045205) #9	ZNF628 (ENSCATG00000040762) #11	NAT14 (ENSCATG00000033023) #10	SSC5D (ENSCATG00000030266) #12	SBK2 (ENSCATG00000031008) #13	ENSCATG00000039776	ZNF579 (ENSCATG00000013450) #15	FIZ1 (ENSCATG00000043603) #16	ZNF524 (ENSCATG00000023063) #17	ENSCATG00000039302	ZNF784 (ENSCATG00000032549) #19	ZNF580 (ENSCATG00000003383) #20	ZNF581 (ENSCATG00000000627)	CCDC106 (ENSCATG00000033559) #21	U2AF2 (ENSCATG00000004637) #22	EPN1 (ENSCATG00000026970) #23	NLRP9 (ENSCATG00000035579) #36	ENSCATG00000029889	ENSCATG00000044514	NLRP11 (ENSCATG00000004890)	NLRP4 (ENSCATG00000024950)	NLRP13 (ENSCATG00000032693)	NLRP8 (ENSCATG00000037501)	NLRP5 (ENSCATG00000013095)	ZNF787 (ENSCATG00000034101)	ZNF444 (ENSCATG00000035089)	ENSCATG00000039723	ZSCAN5B (ENSCATG00000038324)	ZSCAN5C (ENSCATG00000040802)	ZSCAN5A (ENSCATG00000039708)
Drill	MODERN SPECIES	1225	COX6B2 (ENSMLEG00000042579)	GARIN5B (ENSMLEG00000035209)	IL11 (ENSMLEG00000041422)	RPL28 (ENSMLEG00000039619)	ENSMLEG00000043180	ISOC2 (ENSMLEG00000041167) #7	C19orf85 (ENSMLEG00000043548) #9	ENSMLEG00000024576	ENSMLEG00000030296 #12	ENSMLEG00000029223	ENSMLEG00000036344	ZNF524 (ENSMLEG00000007779) #17	ZNF580 (ENSMLEG00000014271) #20	ZNF581 (ENSMLEG00000006114)	CCDC106 (ENSMLEG00000037835) #21	U2AF2 (ENSMLEG00000032219) #22	EPN1 (ENSMLEG00000026771) #23	NLRP9 (ENSMLEG00000036273) #36	ENSMLEG00000033753	ENSMLEG00000018794	NLRP11 (ENSMLEG00000044289)	NLRP4 (ENSMLEG00000038409)	NLRP13 (ENSMLEG00000037124)	NLRP8 (ENSMLEG00000036613)	NLRP5 (ENSMLEG00000026428)	ENSMLEG00000006662	GALP (ENSMLEG00000039804)	ZSCAN5B (ENSMLEG00000010543)	ZSCAN5C (ENSMLEG00000032490)	ZSCAN5A (ENSMLEG00000043375)	EDDM13 (ENSMLEG00000042817)
Hominoidea	ANCESTRAL SPECIES		ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b	ENSGT00510000055233
Gibbon	MODERN SPECIES		ENSNLEG00000010503	UBE2S (ENSNLEG00000010512)	ENSNLEG00000010530 #7	C19orf85 (ENSNLEG00000028043) #9	ZNF628 (ENSNLEG00000010532) #11	NAT14 (ENSNLEG00000010535) #10	ENSNLEG00000029215 #12	ENSNLEG00000029543 #13	SBK3 (ENSNLEG00000010537) #14	FIZ1 (ENSNLEG00000034189) #16	ENSNLEG00000033320	ZNF784 (ENSNLEG00000010550) #19	ZNF581 (ENSNLEG00000010553)	ENSNLEG00000031908	CCDC106 (ENSNLEG00000033164) #21	U2AF2 (ENSNLEG00000010562) #22	EPN1 (ENSNLEG00000010598) #23	ENSNLEG00000029211	ENSNLEG00000010640	ENSNLEG00000010648	NLRP11 (ENSNLEG00000010660)	NLRP4 (ENSNLEG00000010674)	NLRP13 (ENSNLEG00000010718)	NLRP8 (ENSNLEG00000010724)	NLRP5 (ENSNLEG00000010742)	ZNF444 (ENSNLEG00000034144)	GALP (ENSNLEG00000010775)	ZSCAN5B (ENSNLEG00000010781)	ZSCAN5C (ENSNLEG00000010789)	ZSCAN5A (ENSNLEG00000010791)	EDDM13 (ENSNLEG00000030879)
Hominidae	ANCESTRAL SPECIES		ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b	ENSGT00510000055233
Orangutan	MODERN SPECIES	10	ISOC2 (ENSPPYG00000010422) #7	C19orf85 (ENSPPYG00000041745) #9	ZNF628 (ENSPPYG00000032926) #11	NAT14 (ENSPPYG00000010548) #10	ENSPPYG00000010530 #12	ENSPPYG00000010551 #13	SBK3 (ENSPPYG00000033491) #14	ZNF579 (ENSPPYG00000034627) #15	FIZ1 (ENSPPYG00000035631) #16	ZNF524 (ENSPPYG00000010424) #17	ZNF865 (ENSPPYG00000010425) #18	ZNF784 (ENSPPYG00000037754) #19	ZNF580 (ENSPPYG00000039650) #20	ZNF581 (ENSPPYG00000010427)	CCDC106 (ENSPPYG00000010428) #21	U2AF2 (ENSPPYG00000010429) #22	EPN1 (ENSPPYG00000010430) #23	NLRP9 (ENSPPYG00000010432) #36	ENSPPYG00000032456	ENSPPYG00000035845	ENSPPYG00000034602	NLRP11 (ENSPPYG00000010435)	NLRP4 (ENSPPYG00000010436)	NLRP13 (ENSPPYG00000010437)	NLRP8 (ENSPPYG00000041544)	NLRP5 (ENSPPYG00000010438)	ZNF787 (ENSPPYG00000031490)	ZNF444 (ENSPPYG00000010439)	GALP (ENSPPYG00000010441)	ZSCAN5B (ENSPPYG00000010442)	ZSCAN5C (ENSPPYG00000030769)
Homo/Pan/Gorilla group	ANCESTRAL SPECIES		ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00910000148367	ENSGT00940000163218 #36	ENSGT00940000163220.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b
Gorilla	DUPLICATION
Gorilla	MODERN SPECIES	10	C19orf85 (ENSGGOG00000039912) #9	ZNF628 (ENSGGOG00000026699) #11	NAT14 (ENSGGOG00000003631) #10	ENSGGOG00000003632 #12	ENSGGOG00000002404 #13	SBK3 (ENSGGOG00000024208) #14	ZNF579 (ENSGGOG00000043034) #15	ENSGGOG00000044010	ZNF524 (ENSGGOG00000010748) #17	ENSGGOG00000039725	ZNF784 (ENSGGOG00000016815) #19	ZNF580 (ENSGGOG00000028333) #20	ZNF581 (ENSGGOG00000015656)	ENSGGOG00000041238	CCDC106 (ENSGGOG00000015660) #21	ENSGGOG00000041216 #22	NLRP9 (ENSGGOG00000023343) #36	ENSGGOG00000025780	NLRP11 (ENSGGOG00000016443)	NLRP4 (ENSGGOG00000016786)	NLRP13 (ENSGGOG00000008273)	NLRP8 (ENSGGOG00000038077)	NLRP5 (ENSGGOG00000004662)	ZNF787 (ENSGGOG00000026899)	ZNF444 (ENSGGOG00000027831)	GALP (ENSGGOG00000014081)	ENSGGOG00000014084	ENSGGOG00000027356	ZSCAN5C (ENSGGOG00000014089)	ZSCAN5A (ENSGGOG00000024785)	EDDM13 (ENSGGOG00000043046)
Gorilla	MODERN SPECIES	380																ENSGGOG00000036399 #22
Homo/Pan group	ANCESTRAL SPECIES		ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b	ENSGT00510000055233
Pan	ANCESTRAL SPECIES	9	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT01100000264805	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00940000163220.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00910000145073	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000164597	ENSGT00940000163230.a.a	ENSGT00940000163230.a.b	ENSGT00510000055233
Chimpanzee	MODERN SPECIES	10	ISOC2 (ENSPTRG00000011509) #7	C19orf85 (ENSPTRG00000044228) #9	ZNF628 (ENSPTRG00000052545) #11	NAT14 (ENSPTRG00000011512) #10	SSC5D (ENSPTRG00000023746) #12	SBK2 (ENSPTRG00000011514) #13	SBK3 (ENSPTRG00000040572) #14	ZNF579 (ENSPTRG00000011517) #15	FIZ1 (ENSPTRG00000011518) #16	ZNF524 (ENSPTRG00000011519) #17	ENSPTRG00000048922	ZNF784 (ENSPTRG00000011520) #19	ZNF580 (ENSPTRG00000011521) #20	ZNF581 (ENSPTRG00000033802)	CCDC106 (ENSPTRG00000011522) #21	U2AF2 (ENSPTRG00000011523) #22	EPN1 (ENSPTRG00000011524) #23	NLRP9 (ENSPTRG00000011526) #36	NLRP11 (ENSPTRG00000011529)	NLRP4 (ENSPTRG00000011530)	NLRP13 (ENSPTRG00000011531)	NLRP8 (ENSPTRG00000011532)	NLRP5 (ENSPTRG00000011533)	ENSPTRG00000049425	ZNF444 (ENSPTRG00000011535)	GALP (ENSPTRG00000022571)	ZSCAN5B (ENSPTRG00000024093)	ZSCAN5C (ENSPTRG00000043651)	ZSCAN5A (ENSPTRG00000050956)	EDDM13 (ENSPTRG00000050856)	ENSPTRG00000045738
Bonobo	MODERN SPECIES	10	TMEM190 (ENSPPAG00000029512)	ENSPPAG00000038000	UBE2S (ENSPPAG00000040141)	ISOC2 (ENSPPAG00000022599) #7	C19orf85 (ENSPPAG00000036206) #9	ZNF628 (ENSPPAG00000033056) #11	ENSPPAG00000038890	SSC5D (ENSPPAG00000027345) #12	ENSPPAG00000026613 #13	SBK3 (ENSPPAG00000021647) #14	ENSPPAG00000038819	ENSPPAG00000026113	ZNF784 (ENSPPAG00000028459) #19	ZNF581 (ENSPPAG00000004644)	CCDC106 (ENSPPAG00000016988) #21	U2AF2 (ENSPPAG00000039782) #22	EPN1 (ENSPPAG00000039766) #23	ENSPPAG00000040935	NLRP9 (ENSPPAG00000042520) #36	ENSPPAG00000035519	NLRP11 (ENSPPAG00000017134)	NLRP4 (ENSPPAG00000033000)	NLRP13 (ENSPPAG00000041403)	NLRP8 (ENSPPAG00000029544)	NLRP5 (ENSPPAG00000031725)	ENSPPAG00000004792	ZNF444 (ENSPPAG00000038804)	GALP (ENSPPAG00000034903)	ZSCAN5B (ENSPPAG00000009603)	ZSCAN5C (ENSPPAG00000027548)	ZSCAN5A (ENSPPAG00000035437)
Human	MODERN SPECIES	10	ISOC2 (ENSG00000063241) #7	C19orf85 (ENSG00000283567) #9	ZNF628 (ENSG00000197483) #11	NAT14 (ENSG00000090971) #10	SSC5D (ENSG00000179954) #12	SBK2 (ENSG00000187550) #13	SBK3 (ENSG00000231274) #14	ZNF579 (ENSG00000218891) #15	FIZ1 (ENSG00000179943) #16	ZNF524 (ENSG00000171443) #17	ZNF865 (ENSG00000261221) #18	ZNF784 (ENSG00000179922) #19	ZNF580 (ENSG00000213015) #20	ZNF581 (ENSG00000171425)	CCDC106 (ENSG00000173581) #21	U2AF2 (ENSG00000063244) #22	EPN1 (ENSG00000063245) #23	NLRP9 (ENSG00000185792) #36	RFPL4A (ENSG00000223638)	RFPL4AL1 (ENSG00000229292)	NLRP11 (ENSG00000179873)	NLRP4 (ENSG00000160505)	NLRP13 (ENSG00000173572)	NLRP8 (ENSG00000179709)	NLRP5 (ENSG00000171487)	ZNF787 (ENSG00000142409)	ZNF444 (ENSG00000167685)	GALP (ENSG00000197487)	ZSCAN5B (ENSG00000197213)	ZSCAN5C (ENSG00000204532)	ZSCAN5A (ENSG00000131848)
Laurasiatheria	ANCESTRAL SPECIES	5	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00940000167929	ENSGT00940000163198 #17	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233
Laurasiatheria_a	ANCESTRAL SPECIES	5	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00940000167929	ENSGT00940000163198 #17	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.c.b	ENSGT00960000186612.B.a.a.c.a.a.a	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349
Laurasiatheria_b	ANCESTRAL SPECIES	5	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477
Carnivora	ANCESTRAL SPECIES	2	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925
Caniformia	ANCESTRAL SPECIES	1	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00940000162376
Caniformia_b	ANCESTRAL SPECIES	34	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00940000162376
Ursidae	ANCESTRAL SPECIES	41	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00940000162376
Ursus	ANCESTRAL SPECIES	123	ENSGT00390000006710	ENSGT00390000008732.a.b	ENSGT00390000008732.a.a.d	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b
American black bear	MODERN SPECIES	2171												ZNF784 (ENSUAMG00000019888) #19	ZNF580 (ENSUAMG00000019887) #20	ZNF581 (ENSUAMG00000019886)	CCDC106 (ENSUAMG00000019885) #21	U2AF2 (ENSUAMG00000019883) #22	EPN1 (ENSUAMG00000019882) #23	ENSUAMG00000019881 #24	NLRP9 (ENSUAMG00000019880) #36
Polar bear	MODERN SPECIES	349	IL11 (ENSUMAG00000024634)	TMEM190 (ENSUMAG00000024632)	ENSUMAG00000024630	UBE2S (ENSUMAG00000024628)	ISOC2 (ENSUMAG00000024626) #7	C19orf85 (ENSUMAG00000024623) #9	NAT14 (ENSUMAG00000024620) #10	ENSUMAG00000024602	SSC5D (ENSUMAG00000024594) #12	SBK2 (ENSUMAG00000024593) #13	ENSUMAG00000024592	ZNF524 (ENSUMAG00000024591) #17	ENSUMAG00000024590 #15	ZNF581 (ENSUMAG00000024588)	CCDC106 (ENSUMAG00000024587) #21	U2AF2 (ENSUMAG00000024586) #22	EPN1 (ENSUMAG00000024585) #23	ENSUMAG00000024584 #24	NLRP9 (ENSUMAG00000024579) #36	ENSUMAG00000024576
Giant Panda	MODERN SPECIES	3	UBE2S (ENSAMEG00000003779)	SHISA7 (ENSAMEG00000003785)	C19orf85 (ENSAMEG00000028820) #9	ZNF628 (ENSAMEG00000030388) #11	NAT14 (ENSAMEG00000003814) #10	SSC5D (ENSAMEG00000003815) #12	ENSAMEG00000025298	SBK2 (ENSAMEG00000003850) #13	ZNF579 (ENSAMEG00000029881) #15	ENSAMEG00000025197 #16	ZNF524 (ENSAMEG00000018908) #17	ZNF784 (ENSAMEG00000028442) #19	ZNF580 (ENSAMEG00000018924) #20	ZNF581 (ENSAMEG00000018933)	CCDC106 (ENSAMEG00000025239) #21	U2AF2 (ENSAMEG00000003864) #22	ENSAMEG00000029232 #23	ENSAMEG00000003921	ENSAMEG00000003924 #36	ENSAMEG00000003957	ENSAMEG00000004531	NLRP8 (ENSAMEG00000004514)	NLRP5 (ENSAMEG00000004498)	ZNF787 (ENSAMEG00000025333)	ZNF444 (ENSAMEG00000027799)	GALP (ENSAMEG00000009545)	ENSAMEG00000023917	ENSAMEG00000030589	ENSAMEG00000009553	ENSAMEG00000009556	ENSAMEG00000009560
Mustelinae	ANCESTRAL SPECIES	72	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163220	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00940000162376
Ferret	MODERN SPECIES	399	UBE2S (ENSMPUG00000007446)	SHISA7 (ENSMPUG00000007436)	ENSMPUG00000020192	ISOC2 (ENSMPUG00000007377) #7	ZNF628 (ENSMPUG00000020191) #11	NAT14 (ENSMPUG00000007371) #10	SBK2 (ENSMPUG00000007362) #13	SBK3 (ENSMPUG00000007347) #14	SSC5D (ENSMPUG00000007330) #12	ENSMPUG00000007322	FIZ1 (ENSMPUG00000007315) #16	ZNF865 (ENSMPUG00000007311) #18	ZNF784 (ENSMPUG00000007306) #19	ZNF581 (ENSMPUG00000020190)	CCDC106 (ENSMPUG00000007280) #21	U2AF2 (ENSMPUG00000007135) #22	EPN1 (ENSMPUG00000007051) #23	ENSMPUG00000007044	ENSMPUG00000006913	ENSMPUG00000006906	NLRP8 (ENSMPUG00000006879)	NLRP5 (ENSMPUG00000006739)	ZNF787 (ENSMPUG00000006732)	ENSMPUG00000006728	ENSMPUG00000006717	GALP (ENSMPUG00000006705)	ENSMPUG00000006686	ENSMPUG00000006681	ZNF667 (ENSMPUG00000006674)	ZNF583 (ENSMPUG00000006667)	ZNF582 (ENSMPUG00000006660)
American mink	MODERN SPECIES	314	UBE2S (ENSNVIG00000012321)	SHISA7 (ENSNVIG00000012333)	ISOC2 (ENSNVIG00000012346) #7	C19orf85 (ENSNVIG00000012365) #9	NAT14 (ENSNVIG00000012388) #10	SSC5D (ENSNVIG00000012394) #12	SBK2 (ENSNVIG00000012408) #13	SBK3 (ENSNVIG00000012418) #14	ENSNVIG00000012421 #15	FIZ1 (ENSNVIG00000012425) #16	ZNF524 (ENSNVIG00000012431) #17	ZNF784 (ENSNVIG00000012440) #19	ZNF580 (ENSNVIG00000012452) #20	ZNF581 (ENSNVIG00000012460)	CC106 (ENSNVIG00000012482) #21	U2AF2 (ENSNVIG00000012522) #22	EPN1 (ENSNVIG00000012556) #23	ENSNVIG00000012586 #24	ENSNVIG00000012606	NLRP13 (ENSNVIG00000012631)	NLRP8 (ENSNVIG00000012682)	NLRP5 (ENSNVIG00000012702)	ZNF787 (ENSNVIG00000012745)	ENSNVIG00000012758	GALP (ENSNVIG00000012760)	ENSNVIG00000012772	EDDM13 (ENSNVIG00000012779)	ZNF667 (ENSNVIG00000012798)	ZNF583 (ENSNVIG00000012812)	ZNF582 (ENSNVIG00000012833)	ZNF471 (ENSNVIG00000012849)
Canidae	ANCESTRAL SPECIES	57	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218.i #36	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794
Canis_lupus	ANCESTRAL SPECIES		ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163220	ENSGT00940000163218.i #36	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794
Dog	MODERN SPECIES		SHISA7 (ENSCAFG00845000868)	ISOC2 (ENSCAFG00845000836) #7	C19orf85 (ENSCAFG00845000804) #9	ZNF628 (ENSCAFG00845000792) #11	NAT14 (ENSCAFG00845000780) #10	SSC5D (ENSCAFG00845000712) #12	SBK3 (ENSCAFG00845000647) #13	ZNF579 (ENSCAFG00845000616) #15	FIZ1 (ENSCAFG00845000597) #16	ZNF524 (ENSCAFG00845000585) #17	ZNF865 (ENSCAFG00845000576) #18	ZNF784 (ENSCAFG00845000563) #19	ZNF580 (ENSCAFG00845000543) #20	ZNF581 (ENSCAFG00845000533)	CCDC106 (ENSCAFG00845000503) #21	U2AF2 (ENSCAFG00845000480) #22	ENSCAFG00845000457 #23	ENSCAFG00845000435	NLRP9 (ENSCAFG00845000421) #36	ENSCAFG00845000403	NLRP8 (ENSCAFG00845000380)	NLRP5 (ENSCAFG00845000354)	ZNF787 (ENSCAFG00845000329)	ZNF444 (ENSCAFG00845000307)	GALP (ENSCAFG00845000284)	ZSCAN5B (ENSCAFG00845000272)	ENSCAFG00845000251	ZNF583 (ENSCAFG00845000230)	ZNF667 (ENSCAFG00845000211)	ENSCAFG00845000189	ZFP28 (ENSCAFG00845000178)
Dingo	MODERN SPECIES	125	UBE2S (ENSCAFG00020015492)	SHISA7 (ENSCAFG00020015491)	ISOC2 (ENSCAFG00020015490) #7	C19orf85 (ENSCAFG00020015488) #9	ZNF628 (ENSCAFG00020015487) #11	NAT14 (ENSCAFG00020015486) #10	SSC5D (ENSCAFG00020015482) #12	SBK2 (ENSCAFG00020015478) #13	ZNF579 (ENSCAFG00020015476) #15	ZNF524 (ENSCAFG00020015474) #17	ZNF865 (ENSCAFG00020015473) #18	ZNF784 (ENSCAFG00020015470) #19	ZNF580 (ENSCAFG00020015469) #20	ZNF581 (ENSCAFG00020015468)	CCDC106 (ENSCAFG00020015467) #21	U2AF2 (ENSCAFG00020015445) #22	EPN1 (ENSCAFG00020015430) #23	ENSCAFG00020015428 #24	ENSCAFG00020015223 #36	ENSCAFG00020015202	NLRP13 (ENSCAFG00020015192)	NLRP8 (ENSCAFG00020015182)	NLRP5 (ENSCAFG00020015175)	ZNF787 (ENSCAFG00020015169)	ZNF444 (ENSCAFG00020015166)	GALP (ENSCAFG00020015163)	ENSCAFG00020015158	ENSCAFG00020015157	ZNF667 (ENSCAFG00020015156)	ZNF583 (ENSCAFG00020015154)	ENSCAFG00020015149
Red fox	MODERN SPECIES	206	UBE2S (ENSVVUG00000007076)	ENSVVUG00000007072	ISOC2 (ENSVVUG00000007056) #7	C19orf85 (ENSVVUG00000007047) #9	NAT14 (ENSVVUG00000007037) #10	SSC5D (ENSVVUG00000007024) #12	SBK2 (ENSVVUG00000007022) #13	SBK3 (ENSVVUG00000007018)	ZNF579 (ENSVVUG00000007015) #15	ZNF524 (ENSVVUG00000007013) #17	FIZ1 (ENSVVUG00000006998) #16	ZNF865 (ENSVVUG00000006986) #18	ZNF784 (ENSVVUG00000006982) #19	ZNF580 (ENSVVUG00000006979) #20	CCDC106 (ENSVVUG00000006966) #21	U2AF2 (ENSVVUG00000006956) #22	EPN1 (ENSVVUG00000006947) #23	RFPL4A (ENSVVUG00000006941) #24	NLRP9 (ENSVVUG00000006784) #36	ENSVVUG00000006745	ENSVVUG00000006739	NLRP13 (ENSVVUG00000006692)	NLRP8 (ENSVVUG00000006673)	NLRP5 (ENSVVUG00000006663)	ZNF787 (ENSVVUG00000006653)	ZNF444 (ENSVVUG00000006639)	GALP (ENSVVUG00000006627)	ENSVVUG00000006615	ENSVVUG00000006610	ENSVVUG00000006590	ZNF667 (ENSVVUG00000006585)
Felidae	ANCESTRAL SPECIES	27	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925
Panthera	ANCESTRAL SPECIES	36	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925
Panthera_a	ANCESTRAL SPECIES	44	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b
lion	MODERN SPECIES	191				NAT14 (ENSPLOG00000017714) #10	ENSPLOG00000017696 #12	SBK2 (ENSPLOG00000017667) #13	SBK3 (ENSPLOG00000017612) #14	ZNF579 (ENSPLOG00000017596) #15	FIZ1 (ENSPLOG00000017585) #16	ZNF524 (ENSPLOG00000017565) #17	ZNF865 (ENSPLOG00000017547) #18	ZNF784 (ENSPLOG00000017501) #19	ZNF580 (ENSPLOG00000017481) #20	ZNF581 (ENSPLOG00000017466)	CCDC106 (ENSPLOG00000017387) #21	U2AF2 (ENSPLOG00000017271) #22	EPN1 (ENSPLOG00000017208) #23	ENSPLOG00000017180 #24	NLRP9 (ENSPLOG00000017090) #36	ENSPLOG00000017076
leopard	MODERN SPECIES	215	SHISA7 (ENSPPRG00000013070)	ISOC2 (ENSPPRG00000013143) #7	C19orf85 (ENSPPRG00000013190) #9	NAT14 (ENSPPRG00000013216) #10	SSC5D (ENSPPRG00000013277) #12	SBK2 (ENSPPRG00000013342) #13	SBK3 (ENSPPRG00000013386) #14	ZNF579 (ENSPPRG00000018704) #15	FIZ1 (ENSPPRG00000013427) #16	ZNF524 (ENSPPRG00000018722) #17	ZNF865 (ENSPPRG00000013523) #18	ZNF784 (ENSPPRG00000013540) #19	ZNF580 (ENSPPRG00000018757) #20	ZNF581 (ENSPPRG00000018774)	CCDC106 (ENSPPRG00000013654) #21	U2AF2 (ENSPPRG00000013843) #22	EPN1 (ENSPPRG00000014509) #23	ENSPPRG00000014652 #24	NLRP9 (ENSPPRG00000014705) #36	ENSPPRG00000018832
Tiger	MODERN SPECIES	144						TMEM150B (ENSPTIG00000012613)	IL11 (ENSPTIG00000011968)	TMEM190 (ENSPTIG00000011833)	ENSPTIG00000011191	UBE2S (ENSPTIG00000010509)	ISOC2 (ENSPTIG00000009431) #7	SBK3 (ENSPTIG00000009172) #14	ZNF784 (ENSPTIG00000008401) #19	ZNF581 (ENSPTIG00000003918)	CCDC106 (ENSPTIG00000006781) #21	U2AF2 (ENSPTIG00000005489) #22	EPN1 (ENSPTIG00000020742) #23	ENSPTIG00000020412 #24	NLRP9 (ENSPTIG00000020208) #36	NLRP4 (ENSPTIG00000019793)	NLRP13 (ENSPTIG00000018517)	NLRP8 (ENSPTIG00000016721)	NLRP5 (ENSPTIG00000015521)	GALP (ENSPTIG00000015190)	ENSPTIG00000015051	EDDM13 (ENSPTIG00000014496)	ZNF667 (ENSPTIG00000013784)	ZNF583 (ENSPTIG00000013245)	ENSPTIG00000012659	ZNF471 (ENSPTIG00000012452)	ZFP28 (ENSPTIG00000012418)
Laurasiatheria_c	ANCESTRAL SPECIES	4	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925
Equus	ANCESTRAL SPECIES	1	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187.g #24	ENSGT00960000186612.B.a.a.c.a.a.b	ENSGT00940000163187.h #24	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794
Donkey	MODERN SPECIES	18	ENSEASG00005020763 #7	C19orf85 (ENSEASG00005020761) #9	NAT14 (ENSEASG00005020757) #10	SSC5D (ENSEASG00005020746) #12	SBK2 (ENSEASG00005020735) #13	SBK3 (ENSEASG00005020736) #14	ZNF579 (ENSEASG00005020733) #15	ENSEASG00005025463 #16	ZNF524 (ENSEASG00005027233) #17	ZNF865 (ENSEASG00005037797) #18	ENSEASG00005030967	ZNF784 (ENSEASG00005020727) #19	ENSEASG00005028500 #20	ZNF581 (ENSEASG00005020724)	CCDC106 (ENSEASG00005036346) #21	U2AF2 (ENSEASG00005020708) #22	EPN1 (ENSEASG00005020700) #23	ENSEASG00005020692	ENSEASG00005020695 #24	ENSEASG00005020689	ENSEASG00005020687	ENSEASG00005020684	ENSEASG00005020683	ENSEASG00005020681	ENSEASG00005035082	ENSEASG00005020670 #24	NLRP4 (ENSEASG00005020556)	NLRP13 (ENSEASG00005020511)	NLRP5 (ENSEASG00005020497)	ENSEASG00005036586	ZNF444 (ENSEASG00005031980)
Horse	MODERN SPECIES	1	ISOC2 (ENSECAG00000015928) #7	C19orf85 (ENSECAG00000029672) #9	ENSECAG00000031021	NAT14 (ENSECAG00000018711)	SSC5D (ENSECAG00000019043) #12	SBK2 (ENSECAG00000019196) #13	SBK3 (ENSECAG00000019786) #14	ZNF579 (ENSECAG00000020219) #15	FIZ1 (ENSECAG00000035261) #16	ZNF524 (ENSECAG00000022619) #17	ZNF865 (ENSECAG00000035836) #18	ZNF784 (ENSECAG00000001409) #19	ZNF581 (ENSECAG00000003138)	ZNF580 (ENSECAG00000034287) #20	CCDC106 (ENSECAG00000006135) #21	U2AF2 (ENSECAG00000010110) #22	EPN1 (ENSECAG00000016192) #23	ENSECAG00000018211 #24	EQUCABV1R902 (ENSECAG00000028666)	ENSECAG00000039293	ENSECAG00000028104	ENSECAG00000020541 #24	NLRP4 (ENSECAG00000020602)	NLRP13 (ENSECAG00000023884)	NLRP5 (ENSECAG00000024101)	ZNF787 (ENSECAG00000033356)	ZNF444 (ENSECAG00000027944)	GALP (ENSECAG00000039466)	ENSECAG00000006782	EDDM13 (ENSECAG00000043555)	ENSECAG00000043276
Chiroptera	ANCESTRAL SPECIES	45	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187.e #24	ENSGT00940000163218 #36	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000161954.f	ENSGT00940000162376
Megabat	MODERN SPECIES	7598											FIZ1 (ENSPVAG00000004550) #16	ZNF784 (ENSPVAG00000004548) #19	ZNF580 (ENSPVAG00000004547) #20	ZNF581 (ENSPVAG00000004546)	CCDC106 (ENSPVAG00000004542) #21	U2AF2 (ENSPVAG00000004540) #22
Microchiroptera	ANCESTRAL SPECIES	44	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187.e #24	ENSGT00940000163218 #36	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000161954.f	ENSGT00940000162376
Greater horseshoe bat	MODERN SPECIES	6	SHISA7 (ENSRFEG00010018732)	ISOC2 (ENSRFEG00010018788) #7	ENSRFEG00010018887 #9	NAT14 (ENSRFEG00010018920) #10	SSC5D (ENSRFEG00010018958) #12	SBK2 (ENSRFEG00010019172) #13	ENSRFEG00010019197	ZNF579 (ENSRFEG00010019231) #15	FIZ1 (ENSRFEG00010019243) #16	ZNF524 (ENSRFEG00010019278) #17	ZNF865 (ENSRFEG00010019288) #18	ZNF784 (ENSRFEG00010019304) #19	ZNF580 (ENSRFEG00010019345) #20	ZNF581 (ENSRFEG00010019356)	CCDC106 (ENSRFEG00010019373) #21	U2AF2 (ENSRFEG00010019444) #22	EPN1 (ENSRFEG00010019629) #23	ENSRFEG00010019686	ENSRFEG00010019722	ENSRFEG00010019752 #24	NLRP9 (ENSRFEG00010019802) #36	NLRP4 (ENSRFEG00010019876)	NLRP13 (ENSRFEG00010005365)	ENSRFEG00010005378	ENSRFEG00010005392	NLRP8 (ENSRFEG00010005405)	NLRP5 (ENSRFEG00010005454)	ZNF787 (ENSRFEG00010005501)	ZNF444 (ENSRFEG00010005526)	ENSRFEG00010005552	ENSRFEG00010005576
Microbat	MODERN SPECIES	2252																ENSMLUG00000011051 #22	EPN1 (ENSMLUG00000013065) #23	ENSMLUG00000028849 #24	ENSMLUG00000013739 #36
Artiodactyla	ANCESTRAL SPECIES	5	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00960000186612.B.a.a.c.b.b	ENSGT00960000186612.B.a.a.c.a.a.a	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b.f	ENSGT00960000186612.B.a.a.c.a.a.b.e.a	ENSGT00940000163635	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064
Suina	ANCESTRAL SPECIES	45	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000160694	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.b.b	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00960000186612.B.a.a.c.a.a.b.e.a.a.b	ENSGT00940000163635.e	ENSGT00940000162284	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048
Pig	MODERN SPECIES	14	ISOC2 (ENSSSCG00000003289) #7	C19orf85 (ENSSSCG00000049623) #9	ZNF628 (ENSSSCG00000025343) #11	NAT14 (ENSSSCG00000058832) #10	SSC5D (ENSSSCG00000037450) #12	SBK2 (ENSSSCG00000033532) #13	ENSSSCG00000060467	ZNF579 (ENSSSCG00000025138) #15	FIZ1 (ENSSSCG00000061310) #16	ZNF524 (ENSSSCG00000024661) #17	ZNF865 (ENSSSCG00000029156) #18	ZNF784 (ENSSSCG00000037024) #19	ZNF580 (ENSSSCG00000031349) #20	ZNF581 (ENSSSCG00000040721)	CCDC106 (ENSSSCG00000035081) #21	U2AF2 (ENSSSCG00000034815) #22	EPN1 (ENSSSCG00000039670) #23	ENSSSCG00000034466	ENSSSCG00000003303	ENSSSCG00000044943	HELZ2 (ENSSSCG00000003306)	NLRP9 (ENSSSCG00000003307) #36	ENSSSCG00000049200	ENSSSCG00000038117	ENSSSCG00000062829	ENSSSCG00000003311	ENSSSCG00000061596	NLRP11 (ENSSSCG00000003314)	NLRP4 (ENSSSCG00000045118)	NLRP13 (ENSSSCG00000024227)	NLRP8 (ENSSSCG00000003315)
Chacoan peccary	MODERN SPECIES	128	ISOC2 (ENSCWAG00000020859) #7	C19orf85 (ENSCWAG00000020895) #9	ZNF628 (ENSCWAG00000020905) #11	NAT14 (ENSCWAG00000020912) #10	SSC5D (ENSCWAG00000020924) #12	SBK2 (ENSCWAG00000007837) #13	SBK3 (ENSCWAG00000007872) #14	ZNF579 (ENSCWAG00000007929) #15	FIZ1 (ENSCWAG00000007944) #16	ZNF524 (ENSCWAG00000007987) #17	ZNF865 (ENSCWAG00000007998) #18	ZNF784 (ENSCWAG00000008026) #19	ZNF580 (ENSCWAG00000008081) #20	ZNF581 (ENSCWAG00000008097)	CCDC106 (ENSCWAG00000008131) #21	U2AF2 (ENSCWAG00000008213) #22	EPN1 (ENSCWAG00000008310) #23	ENSCWAG00000008366	NLRP9 (ENSCWAG00000008466) #36	ENSCWAG00000008894	ENSCWAG00000008942	ENSCWAG00000009052	ENSCWAG00000009098	ENSCWAG00000009159	ENSCWAG00000009231	NLRP13 (ENSCWAG00000009314)	NLRP8 (ENSCWAG00000009519)	NLRP5 (ENSCWAG00000009596)	ZNF787 (ENSCWAG00000009696)	ZNF444 (ENSCWAG00000009727)	GALP (ENSCWAG00000009762)
Artiodactyla_a	ANCESTRAL SPECIES	4	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00960000186612.B.a.a.c.b.b	ENSGT00960000186612.B.a.a.c.a.a.a	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.b.f	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048
Camelidae	ANCESTRAL SPECIES	48	ENSGT00390000006710	ENSGT00390000008732.a.a.d	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000167929	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.a.a.b.f	ENSGT00940000163218 #36	ENSGT00940000163591	ENSGT00940000162898	ENSGT00940000162893	ENSGT00390000016349	ENSGT00510000055233	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00940000162376	ENSGT00940000163087	ENSGT00940000163774
Arabian camel	MODERN SPECIES	35	UBE2S (ENSCDRG00005007952)	SHISA7 (ENSCDRG00005008017)	ISOC2 (ENSCDRG00005008116) #7	ZNF628 (ENSCDRG00005008256) #11	C19orf85 (ENSCDRG00005008315) #9	SSC5D (ENSCDRG00005008360) #12	SBK2 (ENSCDRG00005008543) #13	ENSCDRG00005008564	ENSCDRG00005008877	ZNF524 (ENSCDRG00005008933) #17	ZNF865 (ENSCDRG00005008990) #18	ENSCDRG00005009018	ZNF580 (ENSCDRG00005009048) #20	ZNF581 (ENSCDRG00005009068)	CCDC106 (ENSCDRG00005009109) #21	U2AF2 (ENSCDRG00005009215) #22	EPN1 (ENSCDRG00005009612) #23	ENSCDRG00005009837	ENSCDRG00005009883	ENSCDRG00005009928	ENSCDRG00005009980	ENSCDRG00005010029	ENSCDRG00005010069	NLRP9 (ENSCDRG00005010148) #36	ENSCDRG00005010306	NLRP5 (ENSCDRG00005010437)	ENSCDRG00005010902	ENSCDRG00005010962	EDDM13 (ENSCDRG00005011043)	ZNF667 (ENSCDRG00005011161)	ENSCDRG00005011224
Artiodactyla_b	ANCESTRAL SPECIES	4	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00960000186612.B.a.a.c.b.b	ENSGT00960000186612.B.a.a.c.a.a.a	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00940000163591	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00390000016349	ENSGT00940000163048	ENSGT00510000055233
Cetacea	ANCESTRAL SPECIES	6	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.c.a.a.b.f	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048.i	ENSGT00940000154432	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f
Odontoceti	ANCESTRAL SPECIES	6	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00960000186612.B.a.a.c.a.a.b.f	ENSGT00940000163220	ENSGT00940000163218 #36	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048.i	ENSGT00940000154432	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f
Odontoceti_a	ANCESTRAL SPECIES	29	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048.i	ENSGT00940000154432	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00490000044430	ENSGT00940000163774
Odontoceti_b	ANCESTRAL SPECIES	5	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048.i	ENSGT00940000154432	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00490000044430	ENSGT00940000163774
Monodontidae	ANCESTRAL SPECIES	3	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163187 #24	ENSGT00940000163218 #36	ENSGT00940000163909	ENSGT00940000162898	ENSGT00940000163064	ENSGT00940000162893	ENSGT00940000163048.i	ENSGT00940000154432	ENSGT00390000021477	ENSGT00940000161925	ENSGT00940000154369.c.a	ENSGT00940000162794	ENSGT00940000161954.f	ENSGT00490000044430
Narwhal	MODERN SPECIES	296	ISOC2 (ENSMMNG00015002976) #7	C19orf85 (ENSMMNG00015003007) #9	ZNF628 (ENSMMNG00015003025) #11	NAT14 (ENSMMNG00015003035) #10	SSC5D (ENSMMNG00015003077) #12	SBK2 (ENSMMNG00015003152) #13	SBK3 (ENSMMNG00015003166) #14	ZNF579 (ENSMMNG00015003250) #15	FIZ1 (ENSMMNG00015003264) #16	ZNF524 (ENSMMNG00015003274) #17	ZNF865 (ENSMMNG00015003286) #18	ZNF784 (ENSMMNG00015003294) #19	ZNF580 (ENSMMNG00015003315) #20	ZNF581 (ENSMMNG00015003326)	CCDC106 (ENSMMNG00015003349) #21	U2AF2 (ENSMMNG00015003391) #22	EPN1 (ENSMMNG00015003437) #23	ENSMMNG00015003476 #24	NLRP9 (ENSMMNG00015003516) #36	NLRP8 (ENSMMNG00015003546)	NLRP5 (ENSMMNG00015003682)	ZNF787 (ENSMMNG00015003755)	ZNF444 (ENSMMNG00015003768)	ENSMMNG00015003799	ZNF667 (ENSMMNG00015003823)	ENSMMNG00015003841	ENSMMNG00015000034	ENSMMNG00015000059	ENSMMNG00015000073	ZNF471 (ENSMMNG00015000097)	SMIM17 (ENSMMNG00015000122)
Beluga whale	MODERN SPECIES	14	UBE2S (ENSDLEG00000002127)	SHISA7 (ENSDLEG00000002117)	ISOC2 (ENSDLEG00000002095) #7	ZNF628 (ENSDLEG00000002080) #11	NAT14 (ENSDLEG00000002068) #10	SSC5D (ENSDLEG00000002024) #12	SBK3 (ENSDLEG00000001997)	ZNF579 (ENSDLEG00000001988) #15	FIZ1 (ENSDLEG00000001977) #16	ZNF524 (ENSDLEG00000001965) #17	ZNF865 (ENSDLEG00000001958) #18	ZNF784 (ENSDLEG00000001946) #19	ZNF580 (ENSDLEG00000001934) #20	ZNF581 (ENSDLEG00000001929)	CCDC106 (ENSDLEG00000001913) #21	U2AF2 (ENSDLEG00000001899) #22	EPN1 (ENSDLEG00000001891) #23	ENSDLEG00000001881 #24	NLRP9 (ENSDLEG00000001669) #36	NLRP8 (ENSDLEG00000001601)	NLRP5 (ENSDLEG00000001552)	ZNF787 (ENSDLEG00000001537)	ZNF444 (ENSDLEG00000001529)	ENSDLEG00000001515	ENSDLEG00000001506	ZNF667 (ENSDLEG00000001493)	ZNF583 (ENSDLEG00000001471)	ENSDLEG00000001464	ZNF582 (ENSDLEG00000001451)	ZNF471 (ENSDLEG00000001443)	SMIM17 (ENSDLEG00000001436)
Vaquita	MODERN SPECIES	10	ISOC2 (ENSPSNG00000006012) #7	C19orf85 (ENSPSNG00000005951) #9	ZNF628 (ENSPSNG00000005937) #11	NAT14 (ENSPSNG00000005919) #10	SSC5D (ENSPSNG00000005888) #12	SBK2 (ENSPSNG00000005854) #13	SBK3 (ENSPSNG00000005827) #14	ZNF579 (ENSPSNG00000005815) #15	FIZ1 (ENSPSNG00000005774) #16	ZNF524 (ENSPSNG00000017734) #17	ZNF865 (ENSPSNG00000017721) #18	ZNF784 (ENSPSNG00000017673) #19	ZNF580 (ENSPSNG00000017641) #20	ZNF581 (ENSPSNG00000017612)	CCDC106 (ENSPSNG00000017514) #21	U2AF2 (ENSPSNG00000017435) #22	EPN1 (ENSPSNG00000017341) #23	ENSPSNG00000017266	ENSPSNG00000017198	NLRP9 (ENSPSNG00000017077) #36	NLRP8 (ENSPSNG00000016940)	NLRP5 (ENSPSNG00000016644)	ZNF787 (ENSPSNG00000016570)	ZNF444 (ENSPSNG00000016522)	ENSPSNG00000016461	ZNF667 (ENSPSNG00000016393)	ENSPSNG00000016359	ENSPSNG00000016304	ENSPSNG00000016279	ZNF471 (ENSPSNG00000016218)	ENSPSNG00000016198
Dolphin	MODERN SPECIES	2818													ZNF580 (ENSTTRG00000000983) #20	ZNF581 (ENSTTRG00000000984)	CCDC106 (ENSTTRG00000000986) #21	U2AF2 (ENSTTRG00000000987) #22
Sperm whale	MODERN SPECIES	518													ZNF580 (ENSPCTG00005017757) #20	ZNF581 (ENSPCTG00005017770)	CCDC106 (ENSPCTG00005017791) #21	U2AF2 (ENSPCTG00005017883) #22
Blue whale	MODERN SPECIES	10	C19orf85 (ENSBMSG00010014296) #9	ZNF628 (ENSBMSG00010014275) #11	NAT14 (ENSBMSG00010014258) #10	SSC5D (ENSBMSG00010014214) #12	SBK2 (ENSBMSG00010014172) #13	SBK3 (ENSBMSG00010014147) #14	ZNF579 (ENSBMSG00010014135) #15	FIZ1 (ENSBMSG00010014102) #16	ZNF524 (ENSBMSG00010014074) #17	ZNF865 (ENSBMSG00010014046) #18	ZNF784 (ENSBMSG00010020227) #19	ENSBMSG00010020099	ZNF580 (ENSBMSG00010020049) #20	ZNF581 (ENSBMSG00010020045)	CCDC106 (ENSBMSG00010020015) #21	U2AF2 (ENSBMSG00010019987) #22	EPN1 (ENSBMSG00010019952) #23	ENSBMSG00010019891	ENSBMSG00010019868	NLRP9 (ENSBMSG00010019259) #36	NLRP13 (ENSBMSG00010019062)	NLRP8 (ENSBMSG00010019003)	NLRP5 (ENSBMSG00010018963)	ZNF787 (ENSBMSG00010018928)	ZNF444 (ENSBMSG00010018891)	ENSBMSG00010018862	ENSBMSG00010018823	ZNF667 (ENSBMSG00010018797)	ENSBMSG00010018775	ENSBMSG00010018758	ENSBMSG00010018735
Pecora	ANCESTRAL SPECIES	35	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.b.a	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.b	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.b.a	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b
Yarkand deer	DUPLICATION
Yarkand deer	MODERN SPECIES	27	ENSCHYG00000008157	UBE2S (ENSCHYG00000008105)	SHISA7 (ENSCHYG00000008066)	ISOC2 (ENSCHYG00000008018) #7	C19orf85 (ENSCHYG00000007999) #9	ZNF628 (ENSCHYG00000007983) #11	NAT14 (ENSCHYG00000007961) #10	SSC5D (ENSCHYG00000007835) #12	SBK2 (ENSCHYG00000007806) #13	ENSCHYG00000007783	ZNF579 (ENSCHYG00000007772) #15	ENSCHYG00000007742	ZNF784 (ENSCHYG00000007689) #19	ZNF581 (ENSCHYG00000007663)	CCDC106 (ENSCHYG00000007626) #21	ENSCHYG00000007560 #22	EPN1 (ENSCHYG00000007525) #23	ENSCHYG00000007500	ENSCHYG00000007478	ENSCHYG00000007463	ENSCHYG00000007441	NLRP9 (ENSCHYG00000007387) #36	ENSCHYG00000007362	ENSCHYG00000007303	ENSCHYG00000007276	ENSCHYG00000007246	ENSCHYG00000007230	ENSCHYG00000007193	CACNG6 (ENSCHYG00000007131)	CACNG8 (ENSCHYG00000007079)	CACNG7 (ENSCHYG00000007040)
Yarkand deer	MODERN SPECIES	935																ENSCHYG00000018723 #22
Percora_a	ANCESTRAL SPECIES	32	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.b.a	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.b.a	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b	ENSGT00940000161142.a.b.a.a.b.a
Bovidae	ANCESTRAL SPECIES	31	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.b.a	ENSGT00960000186612.B.a.a.c.a.a.b.e.a.c	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.b.a	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b
Bovinae	ANCESTRAL SPECIES	37	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.b.a	ENSGT00960000186612.B.a.a.c.a.a.b.e.a.c	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.b.a	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b
American bison	MODERN SPECIES	3354	ENSBBBG00000003951	AMPH (ENSBBBG00000015904)	ENSBBBG00000015915	VPS41 (ENSBBBG00000016003)	POU6F2 (ENSBBBG00000007418)	YAE1 (ENSBBBG00000016071)	RALA (ENSBBBG00000016078)	ENSBBBG00000016085	ENSBBBG00000016096	ENSBBBG00000016100	ENSBBBG00000016104	CDK13 (ENSBBBG00000004014)	MPLKIP (ENSBBBG00000016185)	SUGCT (ENSBBBG00000016251)	INHBA (ENSBBBG00000016277)	ENSBBBG00000016287 #22	GLI3 (ENSBBBG00000016416)	C7orf25 (ENSBBBG00000016430)	PSMA2 (ENSBBBG00000007372)	MRPL32 (ENSBBBG00000007141)	ENSBBBG00000016533	HECW1 (ENSBBBG00000016613)	STK17A (ENSBBBG00000016637)	COA1 (ENSBBBG00000016648)	BLVRA (ENSBBBG00000016667)	POLM (ENSBBBG00000016689)	AEBP1 (ENSBBBG00000016760)	POLD2 (ENSBBBG00000004159)	MYL7 (ENSBBBG00000016836)	GCK (ENSBBBG00000004174)	YKT6 (ENSBBBG00000016921)
Bos	ANCESTRAL SPECIES	35	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00960000186612.B.a.a.c.b.b.a.b.a	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a.f	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b	ENSGT00940000160313.u.b.c	ENSGT00940000161142.a.b.a.a.b.a	ENSGT00940000161142.a.b.a.a.a.b.d
Bos_b	ANCESTRAL SPECIES		ENSGT00940000162286.a.a.f.b.b	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a.e	ENSGT00960000186612.B.a.a.c.b.b.a.a	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.b.a	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b	ENSGT00940000160313.u.b.c	ENSGT00390000001958.o
Cow	MODERN SPECIES	9	SHISA7 (ENSBTAG00000008932)	ISOC2 (ENSBTAG00000015950) #7	ENSBTAG00000050011	C19orf85 (ENSBTAG00000051978) #9	ZNF628 (ENSBTAG00000038034) #11	NAT14 (ENSBTAG00000019051) #10	SSC5D (ENSBTAG00000030885) #12	SBK2 (ENSBTAG00000006121) #13	ZNF579 (ENSBTAG00000051917) #15	FIZ1 (ENSBTAG00000030403) #16	ZNF784 (ENSBTAG00000016299) #19	ZNF524 (ENSBTAG00000012333) #17	ZNF580 (ENSBTAG00000047508) #20	ZNF581 (ENSBTAG00000045864)	CCDC106 (ENSBTAG00000011517) #21	U2AF2 (ENSBTAG00000002830) #22	EPN1 (ENSBTAG00000046996) #23	ENSBTAG00000049020	ENSBTAG00000049631	ENSBTAG00000053115	NLRP9 (ENSBTAG00000004725) #36	ENSBTAG00000052278	VSTM1 (ENSBTAG00000002596)	CACNG6 (ENSBTAG00000021657)	CACNG8 (ENSBTAG00000007509)	CACNG7 (ENSBTAG00000007506)	PRKCG (ENSBTAG00000013550)	MYADM (ENSBTAG00000018152)	ENSBTAG00000015139	ENSBTAG00000030416	ENSBTAG00000051149
Hybrid Bos Indicus	MODERN SPECIES	9	ENSBIXG00005020488	C19orf85 (ENSBIXG00005020479) #9	ZNF628 (ENSBIXG00005020464) #11	NAT14 (ENSBIXG00005003460) #10	SSC5D (ENSBIXG00005003451) #12	SBK2 (ENSBIXG00005020397) #13	SBK3 (ENSBIXG00005020383) #14	ZNF579 (ENSBIXG00005003435) #15	FIZ1 (ENSBIXG00005007211) #16	ZNF524 (ENSBIXG00005020340) #17	ZNF865 (ENSBIXG00005020317) #18	ZNF784 (ENSBIXG00005020308) #19	ENSBIXG00005007723 #20	ZNF581 (ENSBIXG00005020274)	ENSBIXG00005020266 #21	U2AF2 (ENSBIXG00005020229) #22	EPN1 (ENSBIXG00005003343) #23	ENSBIXG00005020162	ENSBIXG00005020088	ENSBIXG00005020067	NLRP9 (ENSBIXG00005007296) #36	ENSBIXG00005019992	ENSBIXG00005003268	ENSBIXG00005019961	CACNG8 (ENSBIXG00005019936)	CACNG7 (ENSBIXG00005003256)	PRKCG (ENSBIXG00005019878)	ENSBIXG00005003240	ENSBIXG00005019740	ENSBIXG00005019688	ENSBIXG00005019672
Bos_a	ANCESTRAL SPECIES	52	ENSGT00940000169278	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00960000186612.B.a.a.c.b.a	ENSGT00960000186612.B.a.a.c.b.b.a.a	ENSGT00960000186612.B.a.a.c.b.b.a.b.a	ENSGT00940000163218 #36	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b	ENSGT00940000160313.u.b.d	ENSGT00940000161142.a.b.a.a.b.a	ENSGT00940000161142.a.b.a.a.a.b.d
Domestic yak	MODERN SPECIES	12	C19orf85 (ENSBGRG00000022912) #9	ZNF628 (ENSBGRG00000022885) #11	NAT14 (ENSBGRG00000022856) #10	SSC5D (ENSBGRG00000022738) #12	SBK2 (ENSBGRG00000022713) #13	SBK3 (ENSBGRG00000022646) #14	ZNF579 (ENSBGRG00000022592) #15	FIZ1 (ENSBGRG00000022546) #16	ZNF524 (ENSBGRG00000022526) #17	ENSBGRG00000022500	ENSBGRG00000022488	ZNF784 (ENSBGRG00000022462) #19	ENSBGRG00000022451 #20	ZNF581 (ENSBGRG00000022419)	CCDC106 (ENSBGRG00000022313) #21	U2AF2 (ENSBGRG00000022243) #22	EPN1 (ENSBGRG00000022217) #23	ENSBGRG00000022192	ENSBGRG00000022149	ENSBGRG00000022104	NLRP9 (ENSBGRG00000021962) #36	ENSBGRG00000021908	CACNG6 (ENSBGRG00000021871)	CACNG8 (ENSBGRG00000021779)	CACNG7 (ENSBGRG00000021717)	PRKCG (ENSBGRG00000021653)	ENSBGRG00000021639	ENSBGRG00000021236	ENSBGRG00000021178	ENSBGRG00000020799	ENSBGRG00000020631
Wild yak	MODERN SPECIES	1448												SBK2 (ENSBMUG00000001568) #13	SBK3 (ENSBMUG00000001575) #14	ZNF784 (ENSBMUG00000001603) #19	ZNF581 (ENSBMUG00000001616)	U2AF2 (ENSBMUG00000001659) #22	ENSBMUG00000001671 #23	ENSBMUG00000001692	ENSBMUG00000001705	ENSBMUG00000001717	NLRP9 (ENSBMUG00000001748) #36
Caprinae	ANCESTRAL SPECIES	34	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23	ENSGT00940000163218 #36	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.a.a.a	ENSGT00960000186612.B.a.a.c.a.a.b.e.a.c	ENSGT00960000186612.B.a.a.c.a.a.a.a.a.b.a	ENSGT00940000167174	ENSGT00390000007786.b	ENSGT01050000244893.c.b.a	ENSGT01050000244961.b	ENSGT00940000161219	ENSGT00950000182933.C.a	ENSGT00940000161142.a.b.a.a.b.b	ENSGT00940000160313.u.b	ENSGT00940000161142.a.b.a.a.b.a	ENSGT00940000161142.a.b.a.a.a.b.d
Goat	MODERN SPECIES	9	UBE2S (ENSCHIG00000025320)	SHISA7 (ENSCHIG00000013707)	ISOC2 (ENSCHIG00000024639) #7	ZNF628 (ENSCHIG00000022075) #11	NAT14 (ENSCHIG00000010342) #10	SSC5D (ENSCHIG00000025733) #12	SBK2 (ENSCHIG00000013269) #13	SBK3 (ENSCHIG00000023243) #14	ENSCHIG00000014120	ZNF579 (ENSCHIG00000023249) #15	ZNF524 (ENSCHIG00000011074) #17	ZNF784 (ENSCHIG00000023200) #19	ZNF865 (ENSCHIG00000012252) #18	ZNF581 (ENSCHIG00000012084)	CCDC106 (ENSCHIG00000011786) #21	U2AF2 (ENSCHIG00000023595) #22	EPN1 (ENSCHIG00000012075) #23	NLRP9 (ENSCHIG00000024985) #36	CACNG6 (ENSCHIG00000007908)	CACNG8 (ENSCHIG00000019368)	CACNG7 (ENSCHIG00000017646)	PRKCG (ENSCHIG00000023927)	ENSCHIG00000008352	ENSCHIG00000000686	ENSCHIG00000023461	ENSCHIG00000013557	ENSCHIG00000012440	ENSCHIG00000018215	ENSCHIG00000026562	ENSCHIG00000014763	ENSCHIG00000019688
Rambouillet Sheep	MODERN SPECIES	5	ISOC2 (ENSOARG00020004350) #7	C19orf85 (ENSOARG00020004326) #9	ZNF628 (ENSOARG00020004313) #11	NAT14 (ENSOARG00020004288) #10	SSC5D (ENSOARG00020004206) #12	SBK2 (ENSOARG00020004175) #13	SBK3 (ENSOARG00020004162) #14	ZNF579 (ENSOARG00020004143) #15	FIZ1 (ENSOARG00020004126) #16	ZNF524 (ENSOARG00020004111) #17	ENSOARG00020004097	ZNF865 (ENSOARG00020004074) #18	ZNF784 (ENSOARG00020004051) #19	ZNF580 (ENSOARG00020004038) #20	CCDC106 (ENSOARG00020003989) #21	U2AF2 (ENSOARG00020003937) #22	ENSOARG00020003910	ENSOARG00020003899	ENSOARG00020003877	NLRP9 (ENSOARG00020003830) #36	ENSOARG00020003812	ENSOARG00020003790	ENSOARG00020003716	ENSOARG00020003699	ENSOARG00020003668	CACNG6 (ENSOARG00020003596)	CACNG8 (ENSOARG00020003545)	CACNG7 (ENSOARG00020003508)	PRKCG (ENSOARG00020003423)	ENSOARG00020003407	ENSOARG00020003386
Siberian musk deer	DUPLICATION
Siberian musk deer	MODERN SPECIES	78	ISOC2 (ENSMMSG00000020049) #7	C19orf85 (ENSMMSG00000020030) #9	ZNF628 (ENSMMSG00000020019) #11	NAT14 (ENSMMSG00000020003) #10	SSC5D (ENSMMSG00000019900) #12	SBK2 (ENSMMSG00000019870) #13	ENSMMSG00000019856	ZNF579 (ENSMMSG00000019840) #15	FIZ1 (ENSMMSG00000019832) #16	ZNF524 (ENSMMSG00000019821) #17	ZNF865 (ENSMMSG00000019797) #18	ZNF784 (ENSMMSG00000019781) #19	ZNF580 (ENSMMSG00000019771) #20	ZNF581 (ENSMMSG00000019759)	CCDC106 (ENSMMSG00000019716) #21	ENSMMSG00000019659 #22	EPN1 (ENSMMSG00000019570) #23	ENSMMSG00000019532	ENSMMSG00000019513	ENSMMSG00000019490	ENSMMSG00000019417	NLRP9 (ENSMMSG00000019353) #36	ENSMMSG00000019317	ENSMMSG00000019282	CACNG6 (ENSMMSG00000019232)	CACNG8 (ENSMMSG00000019189)	CACNG7 (ENSMMSG00000019159)	PRKCG (ENSMMSG00000019029)	ENSMMSG00000019017	ENSMMSG00000019005	ENSMMSG00000018875
Siberian musk deer	MODERN SPECIES	1169	OR10A4 (ENSMMSG00000018381)	OR2D2 (ENSMMSG00000018390)	OR2D3 (ENSMMSG00000018407)	ENSMMSG00000018437	ZNF214 (ENSMMSG00000018474)	NLRP14 (ENSMMSG00000018498)	ENSMMSG00000018538	SYT9 (ENSMMSG00000018554)	OLFML1 (ENSMMSG00000018581)	PPFIBP2 (ENSMMSG00000018654)	CYB5R2 (ENSMMSG00000019028)	OVCH2 (ENSMMSG00000019101)	ENSMMSG00000019195	ENSMMSG00000019208	ENSMMSG00000019264	ENSMMSG00000019274 #22	ENSMMSG00000019287	ENSMMSG00000019300	ENSMMSG00000019325	ENSMMSG00000019336	ENSMMSG00000019350	ENSMMSG00000019361	ENSMMSG00000019385	ENSMMSG00000019395	OR5P3 (ENSMMSG00000019416)	ENSMMSG00000019425	ENSMMSG00000019439	OR10A6 (ENSMMSG00000019444)	ENSMMSG00000019452	ENSMMSG00000019462	ENSMMSG00000019473
Atlantogenata	ANCESTRAL SPECIES	73	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00850000133583 #9	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000154852.b #14	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Afrotheria	ANCESTRAL SPECIES	52	ENSGT00390000007165	ENSGT00390000008732.a.a	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Afrotheria_a	DUPLICATION
Afrotheria_a	ANCESTRAL SPECIES	80	ENSGT00390000007165	ENSGT00390000008732.a.a	ENSGT00940000157149	ENSGT00940000162254	ENSGT00390000006753.A #7	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00940000153306.B #16	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d.w #22	ENSGT00940000160411 #23
Elephant	MODERN SPECIES	375	IL11 (ENSLAFG00000001783)	RPL28 (ENSLAFG00000022257)	UBE2S (ENSLAFG00000016870)	ENSLAFG00000030139	ISOC2 (ENSLAFG00000030914) #7	ZNF628 (ENSLAFG00000022529) #11	NAT14 (ENSLAFG00000022638) #10	SSC5D (ENSLAFG00000010882) #12	SBK2 (ENSLAFG00000027456) #13	ENSLAFG00000008686 #16	ZNF865 (ENSLAFG00000030700) #18	ZNF784 (ENSLAFG00000029320) #19	ZNF580 (ENSLAFG00000020757) #20	ZNF581 (ENSLAFG00000027775)	CCDC106 (ENSLAFG00000022305) #21	ENSLAFG00000018056 #22	EPN1 (ENSLAFG00000031411) #23	ENSLAFG00000030776	ENSLAFG00000026274	NLRP9 (ENSLAFG00000028597) #36	ENSLAFG00000032201	ENSLAFG00000027603	ENSLAFG00000006913	ENSLAFG00000012834	ZNF787 (ENSLAFG00000028422)	ZNF444 (ENSLAFG00000027089)	ENSLAFG00000031619	ENSLAFG00000027646	ENSLAFG00000026535	ENSLAFG00000025981	ENSLAFG00000016735
Hyrax	MODERN SPECIES	7229														ZNF580 (ENSPCAG00000014361) #20	CCDC106 (ENSPCAG00000014371) #21	ENSPCAG00000014399 #22	EPN1 (ENSPCAG00000014468) #23
Afrotheria_a	ANCESTRAL SPECIES																	ENSGT00940000155556.d.x #22
Elephant	MODERN SPECIES	95	SPRY1 (ENSLAFG00000001284)	ENSLAFG00000016357	ENSLAFG00000016348	FGF2 (ENSLAFG00000008247)	BBS12 (ENSLAFG00000011118)	ENSLAFG00000032441	IL21 (ENSLAFG00000006024)	IL2 (ENSLAFG00000004433)	ADAD1 (ENSLAFG00000012345)	BLTP1 (ENSLAFG00000003708)	TRPC3 (ENSLAFG00000003656)	BBS7 (ENSLAFG00000009519)	CCNA2 (ENSLAFG00000009517)	EXOSC9 (ENSLAFG00000009514)	ANXA5 (ENSLAFG00000015410)	ENSLAFG00000028496 #22	QRFPR (ENSLAFG00000008559)	TNIP3 (ENSLAFG00000011940)	NDNF (ENSLAFG00000011934)	PRDM5 (ENSLAFG00000006532)	ENSLAFG00000029619	ENSLAFG00000029100	ENSLAFG00000026735	ENSLAFG00000028727	ENSLAFG00000031509	ENSLAFG00000028982	ENSLAFG00000029159	ENSLAFG00000030022	ENSLAFG00000025884	PDE5A (ENSLAFG00000022606)	FABP2 (ENSLAFG00000026610)
Hyrax	MODERN SPECIES	10217																ENSPCAG00000003709 #22
Xenarthra	ANCESTRAL SPECIES	607									ENSGT00940000163198 #17	ENSGT00930000151080 #15	ENSGT00530000064557 #18	ENSGT00940000162820 #19	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22
Armadillo	MODERN SPECIES	1392									ZNF524 (ENSDNOG00000031876) #17	ZNF579 (ENSDNOG00000038526) #15	ZNF865 (ENSDNOG00000045263) #18	ZNF784 (ENSDNOG00000037332) #19	ZNF580 (ENSDNOG00000025922) #20	ZNF581 (ENSDNOG00000045355)	CCDC106 (ENSDNOG00000033169) #21	U2AF2 (ENSDNOG00000047039) #22	ENSDNOG00000033000 #24
Marsupialia	ANCESTRAL SPECIES	53				ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT01100000264180	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Opossum	MODERN SPECIES	421												ZNF524 (ENSMODG00000043037) #17	ENSMODG00000050127	ZNF580 (ENSMODG00000022734) #20	CCDC106 (ENSMODG00000014049) #21	ENSMODG00000047019 #22	ENSMODG00000046394 #23	ENSMODG00000014034 #23	ENSMODG00000014028
Marsupialia_b	ANCESTRAL SPECIES	36	ENSGT00940000161700	ENSGT01030000234578.A.b.b	ENSGT00940000164511.C	ENSGT00940000161254	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Tasmanian devil	DUPLICATION
Tasmanian devil	MODERN SPECIES	2	ENSSHAG00000022075	DNAAF3 (ENSSHAG00000001262)	ENSSHAG00000030335	PPP6R1 (ENSSHAG00000003824)	ENSSHAG00000021195	ENSSHAG00000029320	ENSSHAG00000029811	ENSSHAG00000030806	ENSSHAG00000021140	ENSSHAG00000006109	ENSSHAG00000024461 #10	ENSSHAG00000021430 #11	ENSSHAG00000024482 #12	SBK2 (ENSSHAG00000022715) #13	ZNF865 (ENSSHAG00000030225) #18	ENSSHAG00000029457 #22	CCDC106 (ENSSHAG00000030913) #21	ENSSHAG00000029638	ENSSHAG00000021448	ENSSHAG00000000957	ENSSHAG00000003722	ENSSHAG00000026615	ENSSHAG00000029652	ENSSHAG00000005208	ENSSHAG00000005498	ENSSHAG00000031791	ENSSHAG00000028862	ENSSHAG00000000822	ENSSHAG00000001463	ENSSHAG00000022987	ENSSHAG00000024553
Tasmanian devil	MODERN SPECIES	21	ENSSHAG00000009019	ENSSHAG00000009115	ZBTB33 (ENSSHAG00000009770)	TMEM255A (ENSSHAG00000009820)	ATP1B4 (ENSSHAG00000010668)	LAMP2 (ENSSHAG00000010966)	ENSSHAG00000011426	ENSSHAG00000025372	ENSSHAG00000000511	GRIA3 (ENSSHAG00000014951)	ENSSHAG00000015987	XIAP (ENSSHAG00000016328)	STAG2 (ENSSHAG00000016662)	SH2D1A (ENSSHAG00000022316)	ENSSHAG00000017155	ENSSHAG00000028961 #22	ENSSHAG00000018884	ENSSHAG00000028121	ENSSHAG00000023403	ENSSHAG00000020714	ENSSHAG00000013518	ENSSHAG00000014095	APLN (ENSSHAG00000030970)	XPNPEP2 (ENSSHAG00000014675)	SASH3 (ENSSHAG00000014846)	ZDHHC9 (ENSSHAG00000014933)	ENSSHAG00000015162	BCORL1 (ENSSHAG00000015554)	ENSSHAG00000015713	AIFM1 (ENSSHAG00000015997)	RAB33A (ENSSHAG00000031815)
Diprotodontia	ANCESTRAL SPECIES	102					ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Diprotodontia_a	ANCESTRAL SPECIES	75	ENSGT00940000161700	ENSGT01030000234578.A.b.b	ENSGT00940000164511.C	ENSGT00940000161254	ENSGT00910000144307 #11	ENSGT00950000182932.A.b.b #10	ENSGT00940000162592 #12	ENSGT00940000161663 #13	ENSGT00930000151080 #15	ENSGT00940000153306.B #16	ENSGT00940000163198 #17	ENSGT00530000064557 #18	ENSGT00940000163086 #20	ENSGT00940000163608	ENSGT00390000013183 #21	ENSGT00940000155556.d #22	ENSGT00940000160411 #23
Common wonbat	MODERN SPECIES	917	ENSVURG00010003430	IL11 (ENSVURG00010003414)	COX6B2 (ENSVURG00010003407)	KMT5C (ENSVURG00010003386)	TMEM150B (ENSVURG00010003375)	BRSK1 (ENSVURG00010003317)	ZNF628 (ENSVURG00010003306) #11	NAT14 (ENSVURG00010003295) #10	ENSVURG00010003263 #12	SBK2 (ENSVURG00010003245) #13	ENSVURG00010003232 #15	FIZ1 (ENSVURG00010003229) #16	ZNF524 (ENSVURG00010003224) #17	ENSVURG00010003221	CCDC106 (ENSVURG00010003172) #21	U2AF2 (ENSVURG00010003154) #22	EPN1 (ENSVURG00010003130) #23	NLRP12 (ENSVURG00010003116)	ENSVURG00010003110	ENSVURG00010003094	ENSVURG00010003072	ENSVURG00010003068	ENSVURG00010003067	ENSVURG00010003060	ENSVURG00010003051	ENSVURG00010003040	ENSVURG00010003033	ENSVURG00010003012	ENSVURG00010003003	ENSVURG00010002984	ENSVURG00010002975
koala	MODERN SPECIES	100	TMEM150B (ENSPCIG00000013078)	ENSPCIG00000034685	ENSPCIG00000013077	ZNF628 (ENSPCIG00000013076) #11	NAT14 (ENSPCIG00000013075) #10	ENSPCIG00000033533 #12	ENSPCIG00000007800	SBK2 (ENSPCIG00000007798) #13	ZNF579 (ENSPCIG00000018025) #15	FIZ1 (ENSPCIG00000018024) #16	ENSPCIG00000018023 #17	ZNF865 (ENSPCIG00000018022) #18	ENSPCIG00000018021 #20	ENSPCIG00000018019	CCDC106 (ENSPCIG00000018016) #21	U2AF2 (ENSPCIG00000018013) #22	EPN1 (ENSPCIG00000018011) #23	ENSPCIG00000013073	ENSPCIG00000013071	ENSPCIG00000013068	ENSPCIG00000032542	NLRP12 (ENSPCIG00000013064)	ENSPCIG00000009659	ENSPCIG00000036388	ENSPCIG00000009657	ENSPCIG00000009645	ENSPCIG00000009644	ENSPCIG00000009642	ENSPCIG00000023430	ENSPCIG00000009341	ENSPCIG00000032932
Wallaby	MODERN SPECIES	10095																U2AF2 (ENSMEUG00000002346) #22	ENSMEUG00000002361
Platypus	MODERN SPECIES	1	IL11 (ENSOANG00000050537)	ENSOANG00000046588 #9	MYH14 (ENSOANG00000041913)	KCNC3 (ENSOANG00000042618)	NAPSA (ENSOANG00000012522)	ENSOANG00000038725 #11	NAT14 (ENSOANG00000038676) #10	ENSOANG00000043166 #12	SBK2 (ENSOANG00000032023) #13	SBK3 (ENSOANG00000005787) #14	FIZ1 (ENSOANG00000040573) #16	ZNF865 (ENSOANG00000041472) #18	ENSOANG00000041221 #19	ENSOANG00000050577	CCDC106 (ENSOANG00000046596) #21	U2AF2 (ENSOANG00000040411) #22	EPN1 (ENSOANG00000037007) #23	ENSOANG00000045059	POLD1 (ENSOANG00000042964)	SPIB (ENSOANG00000041267)	ENSOANG00000038245	MYBPC2 (ENSOANG00000003920)	ENSOANG00000003921	SHANK1 (ENSOANG00000045476)	SYT3 (ENSOANG00000045233)	LRRC4B (ENSOANG00000041413)	ASPDH (ENSOANG00000048746)	JOSD2 (ENSOANG00000046169)	ADCK2 (ENSOANG00000049900)	ENSOANG00000042309	BRAF (ENSOANG00000013389)