Laurasiatheria_a DUPLICATION Laurasiatheria_a DUPLICATION Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b #22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b #22 Cetacea DUPLICATION Cetacea ANCESTRAL SPECIES 19 ENSGT01060000248564.b.b ENSGT00890000139472 ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000163100.a ENSGT01090000260045.C.e.b ENSGT01100000263478.b.a.a ENSGT01090000260024.A.a.b.b ENSGT01100000263572.a.a.a.a.a.b.d.b ENSGT00940000164687 ENSGT00940000157904.d ENSGT00940000158972 ENSGT00940000157245 ENSGT00950000182897.B.a.b.a ENSGT00950000183071.a.b ENSGT00390000012178.g.b.a.b.a #22 ENSGT00940000161929 ENSGT01050000244897.a.b.a ENSGT01050000244955.a.b ENSGT00390000013938 ENSGT00950000182865.b.a.b.b.b.b ENSGT00940000155028.q.a.c.a.a ENSGT00530000064049.C ENSGT00390000015476.c ENSGT00390000015476.d.a ENSGT00990000206080 ENSGT00940000155266 ENSGT00390000014547.d.a.a.d ENSGT00940000154665.g.a ENSGT00940000154665.g.b.b ENSGT00940000162817 Odontoceti ANCESTRAL SPECIES 19 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00890000139472 ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000163100.a ENSGT01100000263478.b.a.a ENSGT01090000260024.A.a.b.b ENSGT01100000263572.a.a.a.a.a.b.d.b ENSGT00940000164687 ENSGT00940000157904.d ENSGT00940000158972 ENSGT00940000157245 ENSGT00950000182897.B.a.b.a ENSGT00950000183071.a.b ENSGT00390000012178.g.b.a.b.a #22 ENSGT00940000161929 ENSGT01050000244897.a.b.a ENSGT01050000244955.a.b ENSGT00390000013938 ENSGT00950000182865.b.a.b.b.b.b ENSGT00940000155028.q.a.c.a.a.a ENSGT00530000064049.C ENSGT00390000015476.c ENSGT00390000015476.d.a ENSGT00940000155266 ENSGT00390000014547.d.a.a.d ENSGT00940000154665.g.a ENSGT00940000154665.g.b.b ENSGT00990000206080.a ENSGT00940000162817 Odontoceti_a ANCESTRAL SPECIES 21 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00890000139472.e ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000163100.a ENSGT01100000263478.b.a.a ENSGT01100000263572.a.a.a.a.a.b.d.a ENSGT01100000263572.a.a.a.a.a.b.d.b ENSGT00940000164687 ENSGT00940000157904.d ENSGT00940000158972 ENSGT00940000157245 ENSGT00950000182897.B.a.b.a ENSGT00950000183071.a.b ENSGT00390000012178.g.b.a.b.a #22 ENSGT00940000161929 ENSGT01050000244897.a.b.a ENSGT01050000244955.a.b ENSGT00390000013938 ENSGT00950000182865.b.a.b.b.b.b ENSGT00940000155028.q.a.c.a.a.a ENSGT00530000064049.C ENSGT00390000015476.c ENSGT00390000015476.d.a ENSGT00940000155266 ENSGT00390000014547.d.a.a.d ENSGT00940000154665.g.a ENSGT00940000154665.g.b.b ENSGT00990000206080.a ENSGT00940000162817 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00890000139472.e ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000163100.a ENSGT01100000263478.b.a.a ENSGT01100000263572.a.a.a.a.a.b.d.a ENSGT01100000263572.a.a.a.a.a.b.d.b ENSGT00940000164687 ENSGT00940000157904.d ENSGT00940000158972 ENSGT00940000157245 ENSGT00950000182897.B.a.b.a ENSGT00950000183071.a.b ENSGT00390000012178.g.b.a.b.a #22 ENSGT00940000161929 ENSGT01050000244897.a.b.a ENSGT01050000244955.a.b ENSGT00390000013938 ENSGT00950000182865.b.a.b.b.b.b ENSGT00940000155028.q.a.c.a.a.a ENSGT00530000064049.C ENSGT00390000015476.c ENSGT00390000015476.d.a ENSGT00940000155266 ENSGT00390000014547.d.a.a.d ENSGT00940000154665.g.a ENSGT00940000154665.g.b.b ENSGT00990000206080.a ENSGT01090000260337 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000159471 ENSGT01060000248564.b.b ENSGT00890000139472.e ENSGT00390000006788.a.a ENSGT00940000153904.b ENSGT00940000163100.a ENSGT01100000263478.b.a.a ENSGT01100000263572.a.a.a.a.a.b.d.a ENSGT01100000263572.a.a.a.a.a.b.d.b ENSGT00940000164687 ENSGT00940000157904.d ENSGT00940000158972 ENSGT00940000157245 ENSGT00950000182897.B.a.b.a ENSGT00950000183071.a.b ENSGT00390000012178.g.b.a.b.a #22 ENSGT00940000161929 ENSGT01050000244897.a.b.a ENSGT01050000244955.a.b ENSGT00390000013938 ENSGT00950000182865.b.a.b.b.b.b ENSGT00940000155028.q.b.d ENSGT00530000064049.C ENSGT00390000015476.c ENSGT00390000015476.d.a ENSGT00940000155266 ENSGT00390000014547.d.a.a.d ENSGT00940000154665.g.a ENSGT00940000154665.g.b.b ENSGT00990000206080.a ENSGT01090000260337 Narwhal MODERN SPECIES 309 SLC25A14 (ENSMMNG00015020095) GPR119 (ENSMMNG00015020135) ENSMMNG00015020150 ENOX2 (ENSMMNG00015020213) ENSMMNG00015020346 ENSMMNG00015020482 ENSMMNG00015020519 IGSF1 (ENSMMNG00015020633) ENSMMNG00015020762 ENSMMNG00015020776 STK26 (ENSMMNG00015020850) FRMD7 (ENSMMNG00015020914) RAP2C (ENSMMNG00015020939) MBNL3 (ENSMMNG00015020975) HS6ST2 (ENSMMNG00015021029) ENSMMNG00015021039 #22 ENSMMNG00015021055 GPC4 (ENSMMNG00015021072) GPC3 (ENSMMNG00015021111) CCDC160 (ENSMMNG00015014918) PHF6 (ENSMMNG00015014932) ENSMMNG00015014958 PLAC1 (ENSMMNG00015015053) PABIR2 (ENSMMNG00015015071) ENSMMNG00015015105 ENSMMNG00015015120 MOSPD1 (ENSMMNG00015015143) SMIM10 (ENSMMNG00015015158) ENSMMNG00015015166 ENSMMNG00015015220 ENSMMNG00015015228 Beluga whale MODERN SPECIES 97 ENOX2 (ENSDLEG00000009343) ARHGAP36 (ENSDLEG00000009403) ENSDLEG00000009447 ENSDLEG00000009474 ENSDLEG00000009555 ENSDLEG00000009574 ENSDLEG00000009593 ENSDLEG00000009600 ENSDLEG00000009622 STK26 (ENSDLEG00000009636) FRMD7 (ENSDLEG00000009664) RAP2C (ENSDLEG00000009689) MBNL3 (ENSDLEG00000009709) ENSDLEG00000009737 ENSDLEG00000009752 ENSDLEG00000009763 #22 USP26 (ENSDLEG00000009772) Vaquita MODERN SPECIES 34 GPR119 (ENSPSNG00000021286) ENSPSNG00000021296 ENOX2 (ENSPSNG00000021324) ENSPSNG00000021389 ENSPSNG00000021494 IGSF1 (ENSPSNG00000021617) ENSPSNG00000021761 ENSPSNG00000021778 ENSPSNG00000021797 STK26 (ENSPSNG00000021837) FRMD7 (ENSPSNG00000021916) RAP2C (ENSPSNG00000021968) ENSPSNG00000021985 MBNL3 (ENSPSNG00000022024) HS6ST2 (ENSPSNG00000022087) ENSPSNG00000022105 #22 ENSPSNG00000022111 GPC4 (ENSPSNG00000010161) GPC3 (ENSPSNG00000010234) CCDC160 (ENSPSNG00000010362) PHF6 (ENSPSNG00000010401) ENSPSNG00000010479 PLAC1 (ENSPSNG00000010543) PABIR2 (ENSPSNG00000010575) ENSPSNG00000010626 ENSPSNG00000010694 SMIM10 (ENSPSNG00000010745) ENSPSNG00000010794 ENSPSNG00000010824 ENSPSNG00000010844 ENSPSNG00000010864 Sperm whale MODERN SPECIES 13 GPR119 (ENSPCTG00005015660) RBMX2 (ENSPCTG00005015674) ENOX2 (ENSPCTG00005015726) ARHGAP36 (ENSPCTG00005015910) ENSPCTG00005016178 IGSF1 (ENSPCTG00005016228) ENSPCTG00005017158 ENSPCTG00005017709 ENSPCTG00005017763 STK26 (ENSPCTG00005017926) FRMD7 (ENSPCTG00005018194) ENSPCTG00005018545 RAP2C (ENSPCTG00005018568) MBNL3 (ENSPCTG00005018635) HS6ST2 (ENSPCTG00005018919) ENSPCTG00005019012 #22 USP26 (ENSPCTG00005019026) GPC4 (ENSPCTG00005019050) GPC3 (ENSPCTG00005019082) CCDC160 (ENSPCTG00005019178) PHF6 (ENSPCTG00005019193) ENSPCTG00005019248 PLAC1 (ENSPCTG00005019301) FAM122B (ENSPCTG00005019312) ENSPCTG00005019428 ENSPCTG00005019455 MOSPD1 (ENSPCTG00005019475) ENSPCTG00005019582 ENSPCTG00005019593 ENSPCTG00005019602 ENSPCTG00005019626 Blue whale MODERN SPECIES 40 ZNF280C (ENSBMSG00010018974) SLC25A14 (ENSBMSG00010019050) GPR119 (ENSBMSG00010019214) ENSBMSG00010019230 ENOX2 (ENSBMSG00010019269) ARHGAP36 (ENSBMSG00010019383) ENSBMSG00010019464 ENSBMSG00010019479 ENSBMSG00010019501 IGSF1 (ENSBMSG00010019583) STK26 (ENSBMSG00010019951) FRMD7 (ENSBMSG00010020071) RAP2C (ENSBMSG00010020115) MBNL3 (ENSBMSG00010020141) HS6ST2 (ENSBMSG00010020202) ENSBMSG00010020245 #22 ENSBMSG00010020254 GPC4 (ENSBMSG00010020282) GPC3 (ENSBMSG00010020313) ENSBMSG00010020361 CCDC160 (ENSBMSG00010020402) PHF6 (ENSBMSG00010020419) ENSBMSG00010020439 PLAC1 (ENSBMSG00010020527) PABIR2 (ENSBMSG00010020539) ENSBMSG00010020559 ENSBMSG00010020570 MOSPD1 (ENSBMSG00010020590) ENSBMSG00010020603 SMIM10 (ENSBMSG00010020614) ENSBMSG00010020624 Cetacea ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.b #22 Odontoceti ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.b #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.b #22 Odontoceti_b ANCESTRAL SPECIES 15 ENSGT00390000013305.a.a ENSGT00940000154645.A ENSGT00950000182995.e.a.a.a.db.b ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000155646 ENSGT00940000160213 ENSGT00940000153916.B ENSGT01030000234517.D ENSGT00940000155734 ENSGT00940000168548 ENSGT00390000008041.C.f ENSGT01100000263518.A.a.a.b ENSGT00940000157219 ENSGT00950000182986.a.b.a ENSGT00390000012178.g.b.a.b.b #22 ENSGT00940000161165 ENSGT00390000012474 ENSGT00940000155678 ENSGT00950000185177 ENSGT00940000158432 ENSGT00950000185985 ENSGT00390000015159.a.b ENSGT00470000042500 ENSGT00940000156513 ENSGT00550000074816.A.a ENSGT00940000159266 ENSGT00530000063712.a.b ENSGT00940000155979 ENSGT00940000160181 ENSGT00390000017767.b.a Monodontidae ANCESTRAL SPECIES 13 ENSGT00390000013305.a.a ENSGT00940000154645.A ENSGT00950000182995.e.a.a.a.db.b ENSGT00390000007900 ENSGT00390000004263.b ENSGT00940000155646 ENSGT00940000160213 ENSGT00940000153916.B ENSGT01030000234517.D ENSGT00940000155734 ENSGT00940000168548 ENSGT00390000008041.C.f ENSGT01100000263518.A.a.a.b ENSGT00940000157219 ENSGT00950000182986.a.b.a ENSGT00390000012178.g.b.a.b.b #22 ENSGT00940000161165 ENSGT00390000012474 ENSGT00940000155678 ENSGT00950000185177 ENSGT00940000158432 ENSGT00390000015159.a.b ENSGT00470000042500 ENSGT00940000156513 ENSGT00550000074816.A.a ENSGT00940000159266 ENSGT00530000063712.a.b ENSGT00940000155979 ENSGT00940000160181 ENSGT00390000017767.b.a ENSGT00940000158993 Beluga whale MODERN SPECIES 37 NOL10 (ENSDLEG00000004668) ATP6V1C2 (ENSDLEG00000004632) PDIA6 (ENSDLEG00000004606) KCNF1 (ENSDLEG00000004602) PQLC3 (ENSDLEG00000004589) ENSDLEG00000004566 ENSDLEG00000004551 ENSDLEG00000004536 E2F6 (ENSDLEG00000004522) GREB1 (ENSDLEG00000004506) NTSR2 (ENSDLEG00000004495) LPIN1 (ENSDLEG00000004420) ENSDLEG00000004406 TRIB2 (ENSDLEG00000004400) ENSDLEG00000004393 ENSDLEG00000004388 #22 FAM84A (ENSDLEG00000004385) NBAS (ENSDLEG00000004320) DDX1 (ENSDLEG00000004022) ENSDLEG00000003947 ENSDLEG00000003941 MYCN (ENSDLEG00000003931) FAM49A (ENSDLEG00000003918) RAD51AP2 (ENSDLEG00000003910) VSNL1 (ENSDLEG00000003903) SMC6 (ENSDLEG00000003874) GEN1 (ENSDLEG00000003850) MSGN1 (ENSDLEG00000003842) KCNS3 (ENSDLEG00000003837) RDH14 (ENSDLEG00000003827) NT5C1B (ENSDLEG00000003811) Vaquita MODERN SPECIES 4 ENSPSNG00000022567 NOL10 (ENSPSNG00000022572) ATP6V1C2 (ENSPSNG00000022577) PDIA6 (ENSPSNG00000022580) KCNF1 (ENSPSNG00000022584) SLC66A3 (ENSPSNG00000004284) ROCK2 (ENSPSNG00000004347) E2F6 (ENSPSNG00000004405) ENSPSNG00000004435 ENSPSNG00000004458 NTSR2 (ENSPSNG00000004561) LPIN1 (ENSPSNG00000004678) ENSPSNG00000004854 TRIB2 (ENSPSNG00000004874) ENSPSNG00000004892 ENSPSNG00000004906 #22 LRATD1 (ENSPSNG00000004919) NBAS (ENSPSNG00000004987) DDX1 (ENSPSNG00000005062) ENSPSNG00000005167 MYCN (ENSPSNG00000005177) ENSPSNG00000005190 CYRIA (ENSPSNG00000005208) RAD51AP2 (ENSPSNG00000005244) VSNL1 (ENSPSNG00000005265) SMC6 (ENSPSNG00000005297) GEN1 (ENSPSNG00000005368) MSGN1 (ENSPSNG00000005383) KCNS3 (ENSPSNG00000005395) RDH14 (ENSPSNG00000005407) NT5C1B (ENSPSNG00000005430) Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00390000012178.g.b.a.b #22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b Carnivora ANCESTRAL SPECIES 11 ENSGT00390000003601.a ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00390000012178.g.b.a.b #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.c #22 Canidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.c #22 Canis_lupus ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.c #22 Dog MODERN SPECIES 8 EIF2AK2 (ENSCAFG00845018782) GPATCH11 (ENSCAFG00845018699) HEATR5B (ENSCAFG00845018460) STRN (ENSCAFG00845018075) VIT (ENSCAFG00845017725) FEZ2 (ENSCAFG00845017471) CRIM1 (ENSCAFG00845017126) ENSCAFG00845016854 PPHLN1 (ENSCAFG00845016821) ENSCAFG00845014510 FAM98A (ENSCAFG00845014458) RASGRP3 (ENSCAFG00845014372) LTBP1 (ENSCAFG00845013785) ENSCAFG00845013624 ENSCAFG00845013573 ENSCAFG00845013291 #22 YIPF4 (ENSCAFG00845013264) SLC30A6 (ENSCAFG00845013180) SPAST (ENSCAFG00845012945) DPY30 (ENSCAFG00845012855) MEMO1 (ENSCAFG00845012779) SRD5A2 (ENSCAFG00845012713) XDH (ENSCAFG00845012424) EHD3 (ENSCAFG00845012374) CAPN14 (ENSCAFG00845012156) GALNT14 (ENSCAFG00845011969) CAPN13 (ENSCAFG00845011898) LCLAT1 (ENSCAFG00845011833) LBH (ENSCAFG00845011780) ENSCAFG00845011744 YPEL5 (ENSCAFG00845011721) Red fox MODERN SPECIES 38 ENSVVUG00000008086 ENSVVUG00000008088 ENSVVUG00000008094 GLIPR1 (ENSVVUG00000008101) GLIPR1L2 (ENSVVUG00000008125) ENSVVUG00000008130 CAPS2 (ENSVVUG00000008152) KCNC2 (ENSVVUG00000008169) ENSVVUG00000008177 ENSVVUG00000008182 ATXN7L3B (ENSVVUG00000008201) ENSVVUG00000008213 #22 ENSVVUG00000008215 TRHDE (ENSVVUG00000008252) TPH2 (ENSVVUG00000008519) ENSVVUG00000008561 ENSVVUG00000008565 TBC1D15 (ENSVVUG00000008586) TMEM19 (ENSVVUG00000008629) THAP2 (ENSVVUG00000008651) ZFC3H1 (ENSVVUG00000008655) ENSVVUG00000008688 ENSVVUG00000008702 ENSVVUG00000008707 ENSVVUG00000008710 TSPAN8 (ENSVVUG00000008726) PTPRR (ENSVVUG00000008764) Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES 22 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.b.a #22 ENSGT00390000012178.g.b.a.b.d.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 Ursidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.a #22 Ursus ANCESTRAL SPECIES 246 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.b.a.b #22 ENSGT00390000012178.g.b.a.b.d.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b American black bear MODERN SPECIES 1827 ENSUAMG00000021488 #22 ATP7A (ENSUAMG00000021478) PGK1 (ENSUAMG00000021471) TAF9B (ENSUAMG00000021467) Mustelinae ANCESTRAL SPECIES 181 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b American mink MODERN SPECIES 401 FGF16 (ENSNVIG00000023507) ATRX (ENSNVIG00000023512) MAGT1 (ENSNVIG00000023527) ENSNVIG00000023530 #22 ATP7A (ENSNVIG00000023535) PGK1 (ENSNVIG00000023554) TAF9B (ENSNVIG00000023558) ENSNVIG00000023564 CYSLTR1 (ENSNVIG00000023584) Canidae DUPLICATION Canidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.a.a #22 Canis_lupus ANCESTRAL SPECIES 44 ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333.r.a ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.a.b #22 ENSGT00950000185204 ENSGT00390000012178.g.b.a.b.d.a.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT00940000153288.a.b.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000165353 ENSGT00940000161429 ENSGT00730000111075.b Dog MODERN SPECIES 144 RLIM (ENSCAFG00845030030) NEXMIF (ENSCAFG00845030052) ENSCAFG00845030063 ABCB7 (ENSCAFG00845030100) UPRT (ENSCAFG00845030172) ZDHHC15 (ENSCAFG00845030214) MAGEE2 (ENSCAFG00845030260) PBDC1 (ENSCAFG00845030268) ENSCAFG00845030276 RPL31 (ENSCAFG00845030299) ENSCAFG00845030304 FGF16 (ENSCAFG00845030312) ATRX (ENSCAFG00845030352) MAGT1 (ENSCAFG00845019924) ENSCAFG00845020008 ENSCAFG00845020039 #22 ATP7A (ENSCAFG00845020199) ENSCAFG00845020708 PGK1 (ENSCAFG00845020758) TAF9B (ENSCAFG00845020868) CYSLTR1 (ENSCAFG00845020915) ENSCAFG00845020948 ENSCAFG00845020985 LPAR4 (ENSCAFG00845021017) ENSCAFG00845021038 P2RY10 (ENSCAFG00845021084) GPR174 (ENSCAFG00845021116) TENT5D (ENSCAFG00845021138) BRWD3 (ENSCAFG00845021308) ENSCAFG00845022233 SH3BGRL (ENSCAFG00845022327) Dingo MODERN SPECIES 223 EIF2AK2 (ENSCAFG00020022842) GPATCH11 (ENSCAFG00020022847) HEATR5B (ENSCAFG00020022854) STRN (ENSCAFG00020022876) VIT (ENSCAFG00020022889) FEZ2 (ENSCAFG00020022913) CRIM1 (ENSCAFG00020022922) ENSCAFG00020022982 ENSCAFG00020022999 ENSCAFG00020023002 FAM98A (ENSCAFG00020023008) RASGRP3 (ENSCAFG00020023024) LTBP1 (ENSCAFG00020023118) TTC27 (ENSCAFG00020023206) BIRC6 (ENSCAFG00020023216) ENSCAFG00020023343 #22 YIPF4 (ENSCAFG00020023346) SLC30A6 (ENSCAFG00020023357) SPAST (ENSCAFG00020023436) DPY30 (ENSCAFG00020023631) MEMO1 (ENSCAFG00020023633) SRD5A2 (ENSCAFG00020023636) XDH (ENSCAFG00020023641) EHD3 (ENSCAFG00020023684) GALNT14 (ENSCAFG00020023701) CAPN13 (ENSCAFG00020023707) LCLAT1 (ENSCAFG00020023712) LBH (ENSCAFG00020023715) ENSCAFG00020023716 YPEL5 (ENSCAFG00020023717) ALK (ENSCAFG00020023746) Red fox DUPLICATION Red fox MODERN SPECIES 6 HACD2 (ENSVVUG00000004161) MYLK (ENSVVUG00000004229) CCDC14 (ENSVVUG00000004392) ENSVVUG00000004417 KALRN (ENSVVUG00000004441) ENSVVUG00000004468 UMPS (ENSVVUG00000004616) ITGB5 (ENSVVUG00000004688) ENSVVUG00000007197 ENSVVUG00000007213 HEG1 (ENSVVUG00000007247) SLC12A8 (ENSVVUG00000007273) ZNF148 (ENSVVUG00000007287) SNX4 (ENSVVUG00000007353) OSBPL11 (ENSVVUG00000007401) ENSVVUG00000007413 #22 LMLN (ENSVVUG00000007417) ENSVVUG00000007437 ENSVVUG00000007448 IQCG (ENSVVUG00000007451) LRCH3 (ENSVVUG00000007483) FYTTD1 (ENSVVUG00000008003) RUBCN (ENSVVUG00000008027) MUC20 (ENSVVUG00000008082) ENSVVUG00000008098 TNK2 (ENSVVUG00000008337) TFRC (ENSVVUG00000008402) ZDHHC19 (ENSVVUG00000008435) SLC51A (ENSVVUG00000008440) PCYT1A (ENSVVUG00000008467) TM4SF19 (ENSVVUG00000008481) Red fox MODERN SPECIES 40 ENSVVUG00000016767 ENSVVUG00000016751 ENSVVUG00000016732 DSE (ENSVVUG00000016723) CALHM6 (ENSVVUG00000016722) ENSVVUG00000016721 #22 CALHM5 (ENSVVUG00000016720) CALHM4 (ENSVVUG00000016718) TRAPPC3L (ENSVVUG00000016711) ENSVVUG00000016707 ENSVVUG00000016705 RSPH4A (ENSVVUG00000016700) ZUP1 (ENSVVUG00000016696) KPNA5 (ENSVVUG00000016678) FAM162B (ENSVVUG00000016671) GPRC6A (ENSVVUG00000016663) RFX6 (ENSVVUG00000016613) ENSVVUG00000016599 VGLL2 (ENSVVUG00000016593) ROS1 (ENSVVUG00000015982) DCBLD1 (ENSVVUG00000015933) Canidae ANCESTRAL SPECIES 59 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333.r ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.a.b #22 ENSGT00950000185204 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000165353 ENSGT00940000161429 ENSGT00730000111075.b Canis_lupus ANCESTRAL SPECIES 44 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333.r.a ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.a.b #22 ENSGT00950000185204 ENSGT00390000012178.g.b.a.b.d.a.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT00940000153288.a.b.a.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000165353 Dingo MODERN SPECIES 265 RLIM (ENSCAFG00020024549) NEXMIF (ENSCAFG00020024551) ABCB7 (ENSCAFG00020024573) UPRT (ENSCAFG00020024656) ZDHHC15 (ENSCAFG00020024662) MAGEE2 (ENSCAFG00020024664) ENSCAFG00020024666 ENSCAFG00020024668 ENSCAFG00020024670 ENSCAFG00020024676 FGF16 (ENSCAFG00020024678) ATRX (ENSCAFG00020024682) ENSCAFG00020024699 ENSCAFG00020024701 MAGT1 (ENSCAFG00020024703) ENSCAFG00020024706 #22 ENSCAFG00020024708 ATP7A (ENSCAFG00020024712) PGK1 (ENSCAFG00020024764) TAF9B (ENSCAFG00020024984) CYSLTR1 (ENSCAFG00020024986) ENSCAFG00020024987 ENSCAFG00020024988 LPAR4 (ENSCAFG00020024989) ENSCAFG00020024991 P2RY10 (ENSCAFG00020024995) ENSCAFG00020024996 GPR174 (ENSCAFG00020024998) TENT5D (ENSCAFG00020025000) BRWD3 (ENSCAFG00020025005) ENSCAFG00020025022 Caniformia DUPLICATION Caniformia ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.a #22 Canidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.a #22 Canis_lupus ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.a #22 Dingo MODERN SPECIES 30 NPBWR1 (ENSCAFG00020015443) ENSCAFG00020015442 ENSCAFG00020015441 ENSCAFG00020015440 RB1CC1 (ENSCAFG00020015438) ALKAL1 (ENSCAFG00020015436) ST18 (ENSCAFG00020015423) PCMTD1 (ENSCAFG00020015421) PXDNL (ENSCAFG00020015420) SNTG1 (ENSCAFG00020015399) ENSCAFG00020015388 SNAI2 (ENSCAFG00020015384) CLXN (ENSCAFG00020015379) ENSCAFG00020015372 UBE2V2 (ENSCAFG00020015367) ENSCAFG00020015365 #22 MCM4 (ENSCAFG00020015359) PRKDC (ENSCAFG00020015315) Dog MODERN SPECIES 21 OPRK1 (ENSCAFG00845024764) NPBWR1 (ENSCAFG00845024737) RPSA (ENSCAFG00845024673) ENSCAFG00845024539 RB1CC1 (ENSCAFG00845024092) ENSCAFG00845024001 ST18 (ENSCAFG00845029327) PCMTD1 (ENSCAFG00845029271) PXDNL (ENSCAFG00845029236) ENSCAFG00845029197 SNTG1 (ENSCAFG00845028965) PPDPFL (ENSCAFG00845028586) SNAI2 (ENSCAFG00845028533) EFCAB1 (ENSCAFG00845028482) ENSCAFG00845028428 ENSCAFG00845028412 #22 UBE2V2 (ENSCAFG00845028369) MCM4 (ENSCAFG00845028253) PRKDC (ENSCAFG00845027748) Caniformia_b ANCESTRAL SPECIES 24 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.b.a #22 ENSGT00390000012178.g.b.a.b.d.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 Ursidae ANCESTRAL SPECIES 47 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT01030000239825 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.b.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b.e.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 Ursus DUPLICATION Ursus ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.a.a #22 American black bear MODERN SPECIES 2199 ENSUAMG00000002127 #22 Polar bear MODERN SPECIES 500 ENSUMAG00000015313 #22 SLCO4C1 (ENSUMAG00000015315) SLCO6A1 (ENSUMAG00000015316) PAM (ENSUMAG00000015342) GIN1 (ENSUMAG00000015363) PPIP5K2 (ENSUMAG00000015386) MACIR (ENSUMAG00000015475) ENSUMAG00000015479 NUDT12 (ENSUMAG00000015498) Ursus ANCESTRAL SPECIES 246 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.b.d.b.a.b #22 ENSGT00390000012178.g.b.a.b.d.a #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b Polar bear MODERN SPECIES 266 ATRX (ENSUMAG00000017404) MAGT1 (ENSUMAG00000018638) ENSUMAG00000018667 #22 ATP7A (ENSUMAG00000018795) PGK1 (ENSUMAG00000019727) TAF9B (ENSUMAG00000019735) ENSUMAG00000019746 CYSLTR1 (ENSUMAG00000019766) ENSUMAG00000019770 LPAR4 (ENSUMAG00000019773) Giant Panda MODERN SPECIES 2288 SLC16A2 (ENSAMEG00000002832) RLIM (ENSAMEG00000002826) NEXMIF (ENSAMEG00000002822) ABCB7 (ENSAMEG00000001785) UPRT (ENSAMEG00000001806) ENSAMEG00000023973 ZDHHC15 (ENSAMEG00000017414) ENSAMEG00000026155 MAGEE2 (ENSAMEG00000019120) PBDC1 (ENSAMEG00000011521) ENSAMEG00000028402 FGF16 (ENSAMEG00000031057) ATRX (ENSAMEG00000001904) ENSAMEG00000030323 MAGT1 (ENSAMEG00000006102) COX7B (ENSAMEG00000028958) #22 ATP7A (ENSAMEG00000017631) ENSAMEG00000017619 TAF9B (ENSAMEG00000017613) CYSLTR1 (ENSAMEG00000019893) ENSAMEG00000024348 LPAR4 (ENSAMEG00000020009) P2RY10 (ENSAMEG00000020169) GPR174 (ENSAMEG00000020171) ITM2A (ENSAMEG00000006587) TENT5D (ENSAMEG00000018974) BRWD3 (ENSAMEG00000008691) HMGN5 (ENSAMEG00000030368) SH3BGRL (ENSAMEG00000027788) POU3F4 (ENSAMEG00000019562) CYLC1 (ENSAMEG00000002561) Mustelinae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.a #22 American mink MODERN SPECIES 195 RP1 (ENSNVIG00000003995) SOX17 (ENSNVIG00000003990) ENSNVIG00000003981 #22 MRPL15 (ENSNVIG00000003963) LYPLA1 (ENSNVIG00000003898) ENSNVIG00000003892 TCEA1 (ENSNVIG00000003798) RGS20 (ENSNVIG00000003730) ATP6V1H (ENSNVIG00000003634) TRIQK (ENSNVIG00000003571) RUNX1T1 (ENSNVIG00000003144) ENSNVIG00000003105 SLC26A7 (ENSNVIG00000003049) LRRC69 (ENSNVIG00000003020) OTUD6B (ENSNVIG00000003004) TM55A (ENSNVIG00000002974) C8orf88 (ENSNVIG00000002953) ENSNVIG00000002940 Caniformia ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.b #22 Canidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.b #22 Canis_lupus ANCESTRAL SPECIES 42 ENSGT00390000000706.d ENSGT00940000162104 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00940000154872.C ENSGT00940000155961.c.a ENSGT00940000157738 ENSGT00390000012178.g.b.a.b.d.b.b #22 ENSGT00940000155013 ENSGT00940000154774 ENSGT00940000154516.b ENSGT00390000016016.A ENSGT00650000093445 ENSGT01030000234571.b.b.b.a.a ENSGT00940000153255.a.l ENSGT00940000153255.a.k ENSGT00940000161677.c.b ENSGT00940000153255.b.a.b.b ENSGT00940000153255.b.a.b.a ENSGT00940000153255.b.a.a.a ENSGT00940000153255.b.a.a.b ENSGT00940000161677.c.a ENSGT00940000153255.b.b Dog MODERN SPECIES 7 ENSCAFG00845009577 ENSCAFG00845009802 TNS3 (ENSCAFG00845010444) IGFBP3 (ENSCAFG00845011212) IGFBP1 (ENSCAFG00845011343) ENSCAFG00845011766 ENSCAFG00845011832 ENSCAFG00845011896 ENSCAFG00845011934 ENSCAFG00845011952 #22 EZH2 (ENSCAFG00845012096) CUL1 (ENSCAFG00845012432) CNTNAP2 (ENSCAFG00845012836) ENSCAFG00845012954 TPK1 (ENSCAFG00845013044) ENSCAFG00845013135 NOBOX (ENSCAFG00845013154) ARHGEF5 (ENSCAFG00845013215) OR2A9B (ENSCAFG00845013318) OR2A9 (ENSCAFG00845013334) OR2A7 (ENSCAFG00845013349) OR2A58 (ENSCAFG00845013360) OR2A13 (ENSCAFG00845013372) OR2A14 (ENSCAFG00845013380) OR2A12 (ENSCAFG00845013394) Dingo MODERN SPECIES 389 ENSCAFG00020020411 PKD1L1 (ENSCAFG00020020412) TNS3 (ENSCAFG00020020437) IGFBP3 (ENSCAFG00020020474) IGFBP1 (ENSCAFG00020020480) ADCY1 (ENSCAFG00020020482) ENSCAFG00020020497 ENSCAFG00020020500 ENSCAFG00020020504 PDIA4 (ENSCAFG00020020510) ENSCAFG00020020512 #22 EZH2 (ENSCAFG00020020525) CUL1 (ENSCAFG00020020532) ENSCAFG00020020541 ENSCAFG00020020544 ENSCAFG00020020560 ENSCAFG00020020580 ARHGEF5 (ENSCAFG00020020593) ENSCAFG00020020605 ENSCAFG00020020613 ENSCAFG00020020615 OR2A2 (ENSCAFG00020020621) ENSCAFG00020020627 ENSCAFG00020020633 OR2A12 (ENSCAFG00020020638) OR2A25 (ENSCAFG00020020641) Caniformia_b ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.b #22 Ursidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.b #22 Ursus ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.b.d.b.b #22 American black bear MODERN SPECIES 3971 ENSUAMG00000015834 #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Cetacea ANCESTRAL SPECIES 19 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00390000009110.ab ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00950000182992.a.b.b.b ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 Odontoceti ANCESTRAL SPECIES 19 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00390000009110.ab ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00950000182992.a.b.b.b ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00980000203089 ENSGT00940000159568 ENSGT00940000164489 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b Sperm whale MODERN SPECIES 13 ENSPCTG00005013715 SLC16A2 (ENSPCTG00005013786) RLIM (ENSPCTG00005013848) NEXMIF (ENSPCTG00005013886) ENSPCTG00005013967 ABCB7 (ENSPCTG00005014159) UPRT (ENSPCTG00005014811) ZDHHC15 (ENSPCTG00005014875) ENSPCTG00005015177 MAGEE2 (ENSPCTG00005015233) PBDC1 (ENSPCTG00005015248) ENSPCTG00005015275 FGF16 (ENSPCTG00005015353) ATRX (ENSPCTG00005015436) MAGT1 (ENSPCTG00005015692) ENSPCTG00005015887 ##22 ENSPCTG00005015993 ATP7A (ENSPCTG00005016014) ENSPCTG00005016116 PGK1 (ENSPCTG00005016156) TAF9B (ENSPCTG00005016200) LPAR4 (ENSPCTG00005016476) P2RY10 (ENSPCTG00005016500) ENSPCTG00005016517 GPR174 (ENSPCTG00005016529) ITM2A (ENSPCTG00005016548) TBX22 (ENSPCTG00005016705) ENSPCTG00005016800 ENSPCTG00005016832 TENT5D (ENSPCTG00005016891) BRWD3 (ENSPCTG00005016926) Odontoceti_a ANCESTRAL SPECIES 28 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00390000009110.ab ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00950000182992.a.b.b.b ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00980000203089 ENSGT00940000159568 ENSGT00940000164489 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b Dolphin MODERN SPECIES 2961 ATRX (ENSTTRG00000004342) MAGT1 (ENSTTRG00000004379) COX7B (ENSTTRG00000004387) ##22 Odontoceti_b ANCESTRAL SPECIES 17 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00390000009110.ab ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00950000182992.a.b.b.b ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00980000203089 ENSGT00940000159568 ENSGT01090000260912.A ENSGT00940000164489 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 Monodontidae ANCESTRAL SPECIES 19 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00960000186788.c ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00950000182992.a.b.b.b ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00940000159568 ENSGT01090000260912.A ENSGT00940000164489 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b Narwhal MODERN SPECIES 309 ENSMMNG00015011664 SLC16A2 (ENSMMNG00015011721) RLIM (ENSMMNG00015011741) NEXMIF (ENSMMNG00015011752) ENSMMNG00015011764 ABCB7 (ENSMMNG00015011807) UPRT (ENSMMNG00015011908) ZDHHC15 (ENSMMNG00015011945) MAGEE2 (ENSMMNG00015011964) ENSMMNG00015011974 PBDC1 (ENSMMNG00015011993) ENSMMNG00015012016 FGF16 (ENSMMNG00015009354) ATRX (ENSMMNG00015009368) MAGT1 (ENSMMNG00015009385) ENSMMNG00015009397 ##22 ATP7A (ENSMMNG00015009419) ENSMMNG00015009432 PGK1 (ENSMMNG00015009442) TAF9B (ENSMMNG00015009451) RTL3 (ENSMMNG00015009461) LPAR4 (ENSMMNG00015009468) P2RY10 (ENSMMNG00015009475) ENSMMNG00015009482 ITM2A (ENSMMNG00015009496) ENSMMNG00015009510 TBX22 (ENSMMNG00015009523) ENSMMNG00015009536 TENT5D (ENSMMNG00015009540) BRWD3 (ENSMMNG00015009554) ENSMMNG00015009577 Beluga whale MODERN SPECIES 15 ENSDLEG00000002853 SLC16A2 (ENSDLEG00000002823) RLIM (ENSDLEG00000002817) NEXMIF (ENSDLEG00000002812) ENSDLEG00000002805 ENSDLEG00000002793 ABCB7 (ENSDLEG00000002777) UPRT (ENSDLEG00000002766) ZDHHC15 (ENSDLEG00000002756) ENSDLEG00000002753 PBDC1 (ENSDLEG00000002743) FGF16 (ENSDLEG00000002733) ENSDLEG00000002727 ATRX (ENSDLEG00000002566) MAGT1 (ENSDLEG00000002529) ENSDLEG00000002519 ##22 ATP7A (ENSDLEG00000002484) ENSDLEG00000002475 ENSDLEG00000002472 PGK1 (ENSDLEG00000002462) TAF9B (ENSDLEG00000002449) RTL3 (ENSDLEG00000002439) LPAR4 (ENSDLEG00000002433) P2RY10 (ENSDLEG00000002430) ENSDLEG00000002427 GPR174 (ENSDLEG00000002420) ITM2A (ENSDLEG00000002408) TBX22 (ENSDLEG00000002390) ENSDLEG00000002378 FAM46D (ENSDLEG00000002371) ENSDLEG00000002366 Vaquita MODERN SPECIES 34 CDX4 (ENSPSNG00000021015) CHIC1 (ENSPSNG00000021038) ZCCHC13 (ENSPSNG00000021100) ENSPSNG00000021128 SLC16A2 (ENSPSNG00000021147) RLIM (ENSPSNG00000021171) NEXMIF (ENSPSNG00000021191) ABCB7 (ENSPSNG00000021266) UPRT (ENSPSNG00000021463) ZDHHC15 (ENSPSNG00000021505) MAGEE2 (ENSPSNG00000021558) PBDC1 (ENSPSNG00000021568) FGF16 (ENSPSNG00000021608) ATRX (ENSPSNG00000021664) MAGT1 (ENSPSNG00000021746) ENSPSNG00000021781 ##22 ENSPSNG00000021803 ATP7A (ENSPSNG00000013495) ENSPSNG00000013610 ENSPSNG00000013679 PGK1 (ENSPSNG00000013773) TAF9B (ENSPSNG00000013833) RTL3 (ENSPSNG00000013887) LPAR4 (ENSPSNG00000013916) P2RY10 (ENSPSNG00000013950) ENSPSNG00000013978 GPR174 (ENSPSNG00000014042) ITM2A (ENSPSNG00000014072) TBX22 (ENSPSNG00000014253) TENT5D (ENSPSNG00000014369) BRWD3 (ENSPSNG00000014395) Blue whale MODERN SPECIES 40 ZCCHC13 (ENSBMSG00010020707) ENSBMSG00010020715 SLC16A2 (ENSBMSG00010020722) ENSBMSG00010020729 RLIM (ENSBMSG00010020736) NEXMIF (ENSBMSG00010020750) ENSBMSG00010020759 ABCB7 (ENSBMSG00010020772) UPRT (ENSBMSG00010020790) ZDHHC15 (ENSBMSG00010020818) MAGEE2 (ENSBMSG00010020865) PBDC1 (ENSBMSG00010020886) FGF16 (ENSBMSG00010020906) ATRX (ENSBMSG00010020930) MAGT1 (ENSBMSG00010020956) ENSBMSG00010020983 ##22 ATP7A (ENSBMSG00010020999) ENSBMSG00010021016 PGK1 (ENSBMSG00010021023) TAF9B (ENSBMSG00010021035) LPAR4 (ENSBMSG00010021050) GPR174 (ENSBMSG00010016108) ITM2A (ENSBMSG00010016249) TBX22 (ENSBMSG00010016318) ENSBMSG00010016362 ENSBMSG00010016407 ENSBMSG00010016435 SH3BGRL (ENSBMSG00010016502) ENSBMSG00010016527 ENSBMSG00010016538 POU3F4 (ENSBMSG00010016551) Suina ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Pig MODERN SPECIES 300 ENSSSCG00000051237 NEXMIF (ENSSSCG00000035689) ABCB7 (ENSSSCG00000012424) UPRT (ENSSSCG00000012425) ZDHHC15 (ENSSSCG00000012426) ENSSSCG00000012427 MAGEE2 (ENSSSCG00000062125) PBDC1 (ENSSSCG00000030577) ENSSSCG00000045569 ENSSSCG00000061476 ENSSSCG00000031428 ENSSSCG00000044504 FGF16 (ENSSSCG00000022833) ATRX (ENSSSCG00000012434) MAGT1 (ENSSSCG00000012435) COX7B (ENSSSCG00000032129) ##22 ATP7A (ENSSSCG00000012437) ENSSSCG00000030886 PGK1 (ENSSSCG00000012440) TAF9B (ENSSSCG00000026714) CYSLTR1 (ENSSSCG00000039203) ENSSSCG00000052341 ENSSSCG00000052427 LPAR4 (ENSSSCG00000012445) P2RY10 (ENSSSCG00000012446) GPR174 (ENSSSCG00000021734) ENSSSCG00000045237 ITM2A (ENSSSCG00000012448) TBX22 (ENSSSCG00000012449) TENT5D (ENSSSCG00000012450) BRWD3 (ENSSSCG00000025156) Laurasiatheria_b ANCESTRAL SPECIES 10 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00390000012178.g.b.a.b #22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 Carnivora ANCESTRAL SPECIES 11 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00390000012178.g.b.a.b #22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 Felidae ANCESTRAL SPECIES 12 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00940000166485.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00940000159568 ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 Panthera ANCESTRAL SPECIES 75 ENSGT00970000193421.B.c.b ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00940000159568 Tiger MODERN SPECIES 336 ENSPTIG00000021338 FGF16 (ENSPTIG00000021358) ATRX (ENSPTIG00000021388) MAGT1 (ENSPTIG00000021447) COX7B (ENSPTIG00000021523) ##22 ATP7A (ENSPTIG00000021533) Panthera_a ANCESTRAL SPECIES 90 ENSGT00970000193421.B.c.b ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.a.a ##22 ENSGT00940000159568 lion MODERN SPECIES 88 ALAS2 (ENSPLOG00000018064) APEX2 (ENSPLOG00000017994) PFKFB1 (ENSPLOG00000017772) ENSPLOG00000017485 ENSPLOG00000017426 MAGED2 (ENSPLOG00000017329) GNL3L (ENSPLOG00000017251) FGD1 (ENSPLOG00000017101) TSR2 (ENSPLOG00000017069) WNK3 (ENSPLOG00000016605) FAM120C (ENSPLOG00000016518) PHF8 (ENSPLOG00000016412) FGF16 (ENSPLOG00000016349) ATRX (ENSPLOG00000016232) MAGT1 (ENSPLOG00000016070) COX7B (ENSPLOG00000015994) ##22 ATP7A (ENSPLOG00000015884) MAGEE2 (ENSPLOG00000015837) ZDHHC15 (ENSPLOG00000015678) UPRT (ENSPLOG00000015614) ABCB7 (ENSPLOG00000015472) NEXMIF (ENSPLOG00000015399) RLIM (ENSPLOG00000015386) SLC16A2 (ENSPLOG00000015313) ZCCHC13 (ENSPLOG00000015295) ENSPLOG00000015275 CHIC1 (ENSPLOG00000015214) CDX4 (ENSPLOG00000015137) VSIG4 (ENSPLOG00000014903) HEPH (ENSPLOG00000014754) ENSPLOG00000014722 leopard MODERN SPECIES 191 ENSPPRG00000024213 FGF16 (ENSPPRG00000024226) ATRX (ENSPPRG00000024247) MAGT1 (ENSPPRG00000024285) COX7B (ENSPPRG00000024301) ##22 ATP7A (ENSPPRG00000024314) ENSPPRG00000024369 Cat MODERN SPECIES 252 SLC16A2 (ENSFCAG00000008075) RLIM (ENSFCAG00000003136) ABCB7 (ENSFCAG00000009557) ENSFCAG00000025696 UPRT (ENSFCAG00000015059) ENSFCAG00000049082 ENSFCAG00000034660 ENSFCAG00000042637 ZDHHC15 (ENSFCAG00000014128) MAGEE2 (ENSFCAG00000027322) PBDC1 (ENSFCAG00000027255) ENSFCAG00000025177 FGF16 (ENSFCAG00000029609) ATRX (ENSFCAG00000030040) MAGT1 (ENSFCAG00000024932) COX7B (ENSFCAG00000033601) ##22 ATP7A (ENSFCAG00000022051) ENSFCAG00000053752 ENSFCAG00000034406 ENSFCAG00000013209 TAF9B (ENSFCAG00000025493) ENSFCAG00000022156 CYSLTR1 (ENSFCAG00000024786) P2RY10 (ENSFCAG00000035535) ITM2A (ENSFCAG00000007957) TBX22 (ENSFCAG00000002301) ENSFCAG00000018360 TENT5D (ENSFCAG00000031837) BRWD3 (ENSFCAG00000022198) ENSFCAG00000037632 SH3BGRL (ENSFCAG00000030770) Caniformia ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Caniformia_b ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 Mustelinae ANCESTRAL SPECIES ENSGT00390000012178.g.b.a.a ##22 American mink MODERN SPECIES 161 IFI44L (ENSNVIG00000020622) IFI44 (ENSNVIG00000020590) ADGRL4 (ENSNVIG00000020565) ENSNVIG00000020549 ENSNVIG00000020530 ##22 ADGRL2 (ENSNVIG00000019994) ENSNVIG00000019882 Laurasiatheria_a ANCESTRAL SPECIES 10 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b Artiodactyla ANCESTRAL SPECIES 9 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 Suina ANCESTRAL SPECIES 7 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00390000016333 ENSGT00940000163487 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000161429 Chacoan peccary MODERN SPECIES 22 CDX4 (ENSCWAG00000002816) CHIC1 (ENSCWAG00000002797) ZCCHC13 (ENSCWAG00000002770) SLC16A2 (ENSCWAG00000002764) RLIM (ENSCWAG00000002752) NEXMIF (ENSCWAG00000002739) ABCB7 (ENSCWAG00000002270) UPRT (ENSCWAG00000002203) ZDHHC15 (ENSCWAG00000002160) MAGEE2 (ENSCWAG00000002135) PBDC1 (ENSCWAG00000002124) ENSCWAG00000002111 FGF16 (ENSCWAG00000002091) ATRX (ENSCWAG00000002015) MAGT1 (ENSCWAG00000001949) COX7B (ENSCWAG00000001934) ##22 ATP7A (ENSCWAG00000001849) ENSCWAG00000001817 PGK1 (ENSCWAG00000001796) TAF9B (ENSCWAG00000001780) ENSCWAG00000001774 CYSLTR1 (ENSCWAG00000001770) LPAR4 (ENSCWAG00000001749) P2RY10 (ENSCWAG00000001742) GPR174 (ENSCWAG00000001736) ITM2A (ENSCWAG00000001718) ENSCWAG00000001703 TBX22 (ENSCWAG00000001694) TENT5D (ENSCWAG00000001683) BRWD3 (ENSCWAG00000001634) ENSCWAG00000001613 Artiodactyla_a ANCESTRAL SPECIES 9 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b Camelidae ANCESTRAL SPECIES 43 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 Arabian camel MODERN SPECIES 204 CHIC1 (ENSCDRG00005020723) ENSCDRG00005020728 ZCCHC13 (ENSCDRG00005020743) SLC16A2 (ENSCDRG00005020750) RLIM (ENSCDRG00005020761) NEXMIF (ENSCDRG00005020765) ABCB7 (ENSCDRG00005020791) UPRT (ENSCDRG00005020970) ZDHHC15 (ENSCDRG00005020979) MAGEE2 (ENSCDRG00005020988) PBDC1 (ENSCDRG00005020992) FGF16 (ENSCDRG00005020998) ATRX (ENSCDRG00005021010) ENSCDRG00005021046 MAGT1 (ENSCDRG00005021053) COX7B (ENSCDRG00005021062) ##22 ATP7A (ENSCDRG00005021074) PGK1 (ENSCDRG00005021108) TAF9B (ENSCDRG00005021113) CYSLTR1 (ENSCDRG00005021119) RTL3 (ENSCDRG00005021121) LPAR4 (ENSCDRG00005021124) P2RY10 (ENSCDRG00005021126) ENSCDRG00005021132 GPR174 (ENSCDRG00005021134) ITM2A (ENSCDRG00005021142) TBX22 (ENSCDRG00005021148) ENSCDRG00005021154 TENT5D (ENSCDRG00005021162) BRWD3 (ENSCDRG00005021171) ENSCDRG00005021186 Alpaca MODERN SPECIES 3276 MAGT1 (ENSVPAG00000001323) COX7B (ENSVPAG00000001324) ##22 Artiodactyla_b ANCESTRAL SPECIES 19 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 Pecora DUPLICATION Pecora DUPLICATION Pecora ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.a ##22 Percora_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.a ##22 Bovidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.a ##22 Caprinae DUPLICATION Caprinae DUPLICATION Caprinae ANCESTRAL SPECIES 24 ENSGT00510000047710 ENSGT00390000018525.a.a.c.b.a ENSGT00940000155967 ENSGT00940000156571 ENSGT00390000006243 ENSGT00940000158733 ENSGT00940000158562 ENSGT00390000015280 ENSGT00940000158321 ENSGT00950000183171.A.b.a.a ENSGT00940000159526 ENSGT00730000110872.a ENSGT01030000235193 ENSGT00940000156399 ENSGT00940000161183 ENSGT00390000012178.g.b.b.a.a.a.a ##22 ENSGT00940000155553 ENSGT00940000155754 ENSGT00940000154586.j ENSGT00390000009578 ENSGT00390000017443.k.b ENSGT00940000155179 ENSGT00440000039958 ENSGT00390000015930 ENSGT00940000155097.f ENSGT00440000039046 ENSGT00940000155771 ENSGT00730000110989 ENSGT00490000043395 ENSGT00940000163559 ENSGT00940000153352.A Goat MODERN SPECIES 12 ENSCHIG00000007977 CWC27 (ENSCHIG00000016233) ADAMTS6 (ENSCHIG00000024306) CENPK (ENSCHIG00000017610) PPWD1 (ENSCHIG00000012297) TRIM23 (ENSCHIG00000011866) TRAPPC13 (ENSCHIG00000023801) SGTB (ENSCHIG00000015161) NLN (ENSCHIG00000024544) ERBIN (ENSCHIG00000014468) ENSCHIG00000025052 ENSCHIG00000013372 ENSCHIG00000008624 MAST4 (ENSCHIG00000016352) CD180 (ENSCHIG00000012138) ENSCHIG00000007869 ##22 PIK3R1 (ENSCHIG00000021158) ENSCHIG00000004863 SLC30A5 (ENSCHIG00000021792) ENSCHIG00000016273 CENPH (ENSCHIG00000014036) ENSCHIG00000026342 CDK7 (ENSCHIG00000023847) CCDC125 (ENSCHIG00000017643) ENSCHIG00000012429 AK6 (ENSCHIG00000017952) RAD17 (ENSCHIG00000020796) MARVELD2 (ENSCHIG00000016241) OCLN (ENSCHIG00000001852) ENSCHIG00000012368 NAIP (ENSCHIG00000018493) Rambouillet Sheep MODERN SPECIES 7 SHISAL2B (ENSOARG00020005809) SREK1IP1 (ENSOARG00020005791) ENSOARG00020005769 CWC27 (ENSOARG00020005744) ADAMTS6 (ENSOARG00020005687) CENPK (ENSOARG00020005638) PPWD1 (ENSOARG00020005575) TRIM23 (ENSOARG00020005534) TRAPPC13 (ENSOARG00020005467) SGTB (ENSOARG00020005415) NLN (ENSOARG00020005037) ERBIN (ENSOARG00020004686) SREK1 (ENSOARG00020004539) MAST4 (ENSOARG00020004329) CD180 (ENSOARG00020004248) ENSOARG00020004229 ##22 PIK3R1 (ENSOARG00020004041) ENSOARG00020004005 SLC30A5 (ENSOARG00020003947) ENSOARG00020003927 CENPH (ENSOARG00020003855) MRPS36 (ENSOARG00020003822) CDK7 (ENSOARG00020003717) TAF9 (ENSOARG00020003593) AK6 (ENSOARG00020003479) RAD17 (ENSOARG00020003355) MARVELD2 (ENSOARG00020003236) OCLN (ENSOARG00020023936) ENSOARG00020023910 NAIP (ENSOARG00020023784) ENSOARG00020023678 Caprinae ANCESTRAL SPECIES 5 ENSGT00390000001376.gb.b.a ENSGT00940000155962 ENSGT00390000012929.q ENSGT00940000153231.A ENSGT00940000162860 ENSGT00940000167875 ENSGT00940000160622 ENSGT00390000005140.b.b.d ENSGT00390000013989.a.ab ENSGT00950000183071.a.a.b ENSGT00390000004600.b.a ENSGT00440000037733 ENSGT00900000141068.e.a.h ENSGT00390000010397.b ENSGT00390000004912 ENSGT00390000012178.g.b.b.a.a.a.b ##22 ENSGT00730000111130 ENSGT00390000018525.b ENSGT00940000153518.d.a ENSGT01100000263537.b.a.a.b.a ENSGT00940000157247 ENSGT00720000108834 ENSGT00940000154474.C ENSGT00940000156884 ENSGT00390000002204 ENSGT00950000182905.a.b ENSGT00950000182882.A.b.b ENSGT00970000194549 ENSGT01020000230389.b.a.a.b ENSGT00390000006330.a.a ENSGT00390000002174.b Rambouillet Sheep MODERN SPECIES 11 CYFIP1 (ENSOARG00020020376) ENSOARG00020020815 TUBGCP5 (ENSOARG00020020859) ENSOARG00020021205 IMP4 (ENSOARG00020021252) ENSOARG00020021317 FAM168B (ENSOARG00020021435) PLEKHB2 (ENSOARG00020021480) ENSOARG00020021651 HS6ST1 (ENSOARG00020021735) UGGT1 (ENSOARG00020021792) SAP130 (ENSOARG00020022426) ENSOARG00020022687 AMMECR1L (ENSOARG00020006543) POLR2D (ENSOARG00020006571) ENSOARG00020006654 ##22 WDR33 (ENSOARG00020006732) SFT2D3 (ENSOARG00020007219) LIMS2 (ENSOARG00020007250) GPR17 (ENSOARG00020007349) MYO7B (ENSOARG00020007427) IWS1 (ENSOARG00020008014) ENSOARG00020008263 ENSOARG00020008323 MAP3K2 (ENSOARG00020008364) ERCC3 (ENSOARG00020008449) BIN1 (ENSOARG00020008621) ENSOARG00020009130 ENSOARG00020009156 NAB1 (ENSOARG00020009187) MFSD6 (ENSOARG00020009267) Goat MODERN SPECIES 11 ENSCHIG00000025882 ENSCHIG00000012973 ENSCHIG00000018690 FAM168B (ENSCHIG00000023919) ENSCHIG00000007457 PLEKHB2 (ENSCHIG00000020463) ENSCHIG00000009789 ENSCHIG00000016781 ENSCHIG00000025950 HS6ST1 (ENSCHIG00000016130) UGGT1 (ENSCHIG00000017321) SAP130 (ENSCHIG00000019417) ENSCHIG00000011826 AMMECR1L (ENSCHIG00000011778) POLR2D (ENSCHIG00000025995) ENSCHIG00000007698 ##22 WDR33 (ENSCHIG00000019104) SFT2D3 (ENSCHIG00000009475) GPR17 (ENSCHIG00000009894) LIMS2 (ENSCHIG00000017089) MYO7B (ENSCHIG00000010823) IWS1 (ENSCHIG00000008783) ENSCHIG00000018775 MAP3K2 (ENSCHIG00000024378) ERCC3 (ENSCHIG00000014551) CYP27C1 (ENSCHIG00000022529) BIN1 (ENSCHIG00000017866) ENSCHIG00000019254 NAB1 (ENSCHIG00000022201) NEMP2 (ENSCHIG00000019525) MFSD6 (ENSCHIG00000012721) Caprinae ANCESTRAL SPECIES 52 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00950000186410 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.a.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 Rambouillet Sheep MODERN SPECIES 205 CDX4 (ENSOARG00020019400) CHIC1 (ENSOARG00020019334) ZCCHC13 (ENSOARG00020019179) SLC16A2 (ENSOARG00020019109) RLIM (ENSOARG00020019056) NEXMIF (ENSOARG00020019011) ABCB7 (ENSOARG00020018131) ENSOARG00020018053 ENSOARG00020018033 UPRT (ENSOARG00020017941) ZDHHC15 (ENSOARG00020017751) MAGEE2 (ENSOARG00020017729) PBDC1 (ENSOARG00020017659) FGF16 (ENSOARG00020017605) MAGT1 (ENSOARG00020017197) ENSOARG00020017129 ##22 ENSOARG00020017092 ATP7A (ENSOARG00020016877) PGK1 (ENSOARG00020016769) TAF9B (ENSOARG00020016750) CYSLTR1 (ENSOARG00020016671) LPAR4 (ENSOARG00020016628) P2RY10 (ENSOARG00020016610) ENSOARG00020016579 ENSOARG00020016548 GPR174 (ENSOARG00020016533) ITM2A (ENSOARG00020016499) TBX22 (ENSOARG00020016413) TENT5D (ENSOARG00020016386) BRWD3 (ENSOARG00020015617) HMGN5 (ENSOARG00020015488) Goat MODERN SPECIES 141 ENSCHIG00000000050 ##22 Bovinae ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.a ##22 Bos ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.a ##22 Bos_b ANCESTRAL SPECIES 29 ENSGT00510000047710 ENSGT00390000018525.a.a.c.b.a ENSGT00940000155967 ENSGT00940000156571 ENSGT00390000006243 ENSGT00940000158733 ENSGT00940000158562 ENSGT00530000065159 ENSGT00390000015280 ENSGT00940000158321 ENSGT00950000183171.A.b.a.a ENSGT00940000159526 ENSGT00730000110872.a ENSGT00940000156399 ENSGT00940000161183 ENSGT00390000012178.g.b.b.a.a ##22 ENSGT00940000155553 ENSGT00940000155754 ENSGT00940000154586.j.g ENSGT00390000009578 ENSGT00390000017443.k.b ENSGT00940000155179 ENSGT00440000039958 ENSGT00940000155097.f ENSGT00390000015930 ENSGT00440000039046 ENSGT00940000155771 ENSGT00730000110989 ENSGT00490000043395 ENSGT00940000163559.m ENSGT00940000153352.A Cow MODERN SPECIES 12 CWC27 (ENSBTAG00000000037) ADAMTS6 (ENSBTAG00000016963) CENPK (ENSBTAG00000044175) PPWD1 (ENSBTAG00000009514) TRIM23 (ENSBTAG00000009519) SHLD3 (ENSBTAG00000047828) TRAPPC13 (ENSBTAG00000016900) SGTB (ENSBTAG00000016902) NLN (ENSBTAG00000016903) ERBIN (ENSBTAG00000000415) SREK1 (ENSBTAG00000007321) ENSBTAG00000053341 ENSBTAG00000049964 MAST4 (ENSBTAG00000025964) CD180 (ENSBTAG00000006360) ENSBTAG00000055154 ##22 ENSBTAG00000034170 PIK3R1 (ENSBTAG00000010989) SLC30A5 (ENSBTAG00000001013) CCNB1 (ENSBTAG00000014239) CENPH (ENSBTAG00000014246) MRPS36 (ENSBTAG00000011045) CDK7 (ENSBTAG00000011046) CCDC125 (ENSBTAG00000017011) TAF9 (ENSBTAG00000027980) AK6 (ENSBTAG00000046192) RAD17 (ENSBTAG00000002073) MARVELD2 (ENSBTAG00000040001) OCLN (ENSBTAG00000000561) GTF2H2 (ENSBTAG00000027983) ENSBTAG00000051768 American bison MODERN SPECIES 3135 SHISAL2B (ENSBBBG00000003043) SREK1IP1 (ENSBBBG00000003042) CWC27 (ENSBBBG00000003037) ENSBBBG00000013931 ADAMTS6 (ENSBBBG00000003025) CENPK (ENSBBBG00000013900) PPWD1 (ENSBBBG00000002975) TRIM23 (ENSBBBG00000013840) TRAPPC13 (ENSBBBG00000013812) SGTB (ENSBBBG00000013762) NLN (ENSBBBG00000013750) ERBIN (ENSBBBG00000002910) SREK1 (ENSBBBG00000013313) MAST4 (ENSBBBG00000002690) CD180 (ENSBBBG00000002607) ENSBBBG00000013048 ##22 ENSBBBG00000007451 ENSBBBG00000013044 Pecora ANCESTRAL SPECIES 27 ENSGT00940000163372 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00940000165353 Percora_a ANCESTRAL SPECIES 22 ENSGT00410000029400 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00390000011425.A Bovidae ANCESTRAL SPECIES 23 ENSGT00940000163063 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00390000011425.A Bovinae DUPLICATION Bovinae ANCESTRAL SPECIES 38 ENSGT00940000160311.`c ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b.a ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01030000234518.D ENSGT00390000015224.c.a.a.b.f.a.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 ENSGT00940000156017 ENSGT00390000011425.A Bos ANCESTRAL SPECIES 30 ENSGT00940000160311.`c ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b.a ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT00390000009948.c.l ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT00390000007560.k.b ENSGT01030000234518.D ENSGT00390000015224.c.a.a.b.f.a.b ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b ENSGT00730000111570 Bos_b ANCESTRAL SPECIES 12 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000163243 ENSGT00940000160087 ENSGT00940000155902 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b.a ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT00550000074618.a.b.ab.a.a.a.a ENSGT01100000263536.B.c.b ENSGT00390000009948.c.l ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT00390000012877 ENSGT00940000158413 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.a.a.b.b.a.a.a.b.b.a.a.a.b ENSGT00530000063516.a.a.c.b ENSGT00440000033232.d ENSGT00390000009554 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005004383 SLC16A2 (ENSBIXG00005025654) RLIM (ENSBIXG00005025624) NEXMIF (ENSBIXG00005025570) ABCB7 (ENSBIXG00005004343) ENSBIXG00005025206 UPRT (ENSBIXG00005025199) ZDHHC15 (ENSBIXG00005007086) MAGEE2 (ENSBIXG00005025035) PBDC1 (ENSBIXG00005025021) ENSBIXG00005024994 FGF16 (ENSBIXG00005024964) ATRX (ENSBIXG00005024905) MAGT1 (ENSBIXG00005024624) ENSBIXG00005004205 ENSBIXG00005004198 ##22 ENSBIXG00005024547 ATP7A (ENSBIXG00005024508) PGK1 (ENSBIXG00005024390) TAF9B (ENSBIXG00005024355) ENSBIXG00005024310 ENSBIXG00005024230 CYSLTR1 (ENSBIXG00005024205) ENSBIXG00005024189 P2RY10 (ENSBIXG00005024150) ENSBIXG00005024140 GPR174 (ENSBIXG00005005599) ENSBIXG00005024094 TBX22 (ENSBIXG00005024042) TENT5D (ENSBIXG00005024005) BRWD3 (ENSBIXG00005023949) Hybrid Bos Indicus MODERN SPECIES 26 TRIM7 (ENSBIXG00005004519) TRIM41 (ENSBIXG00005026488) ENSBIXG00005007643 ENSBIXG00005026618 ENSBIXG00005026624 ENSBIXG00005026630 ZNF496 (ENSBIXG00005004553) NLRP3 (ENSBIXG00005004574) OR2B11 (ENSBIXG00005026765) ENSBIXG00005026771 ENSBIXG00005026781 ENSBIXG00005026786 GCSAML (ENSBIXG00005026826) ENSBIXG00005026848 OR2G2 (ENSBIXG00005026861) ENSBIXG00005026865 ##22 OR2G3 (ENSBIXG00005026871) ENSBIXG00005026891 ENSBIXG00005026899 OR13G1 (ENSBIXG00005004596) OR6F1 (ENSBIXG00005026921) ENSBIXG00005026930 ENSBIXG00005026950 TRIM58 (ENSBIXG00005026978) OR2W3 (ENSBIXG00005026994) ENSBIXG00005027017 ENSBIXG00005027022 ENSBIXG00005027048 ENSBIXG00005027079 ENSBIXG00005004652 OR2AJ1 (ENSBIXG00005027175) Cow DUPLICATION Cow DUPLICATION Cow MODERN SPECIES 8 TMEM233 (ENSBTAG00000048560) CCDC60 (ENSBTAG00000004693) HSPB8 (ENSBTAG00000001303) SRRM4 (ENSBTAG00000008676) SUDS3 (ENSBTAG00000019757) TAOK3 (ENSBTAG00000012550) PEBP1 (ENSBTAG00000018115) WSB2 (ENSBTAG00000007139) RFC5 (ENSBTAG00000007137) KSR2 (ENSBTAG00000044119) NOS1 (ENSBTAG00000002023) FBXO21 (ENSBTAG00000032097) TESC (ENSBTAG00000044078) ENSBTAG00000053074 FBXW8 (ENSBTAG00000036183) ENSBTAG00000037415 ##22 RNFT2 (ENSBTAG00000043976) SPRING1 (ENSBTAG00000047139) MED13L (ENSBTAG00000001888) TBX3 (ENSBTAG00000021706) TBX5 (ENSBTAG00000011384) RBM19 (ENSBTAG00000031824) LHX5 (ENSBTAG00000003107) SDSL (ENSBTAG00000008945) SDS (ENSBTAG00000031814) PLBD2 (ENSBTAG00000019040) DTX1 (ENSBTAG00000016738) RASAL1 (ENSBTAG00000016739) CFAP73 (ENSBTAG00000011924) DDX54 (ENSBTAG00000011930) RITA1 (ENSBTAG00000011937) Cow MODERN SPECIES 26 TRIM52 (ENSBTAG00000019651) ENSBTAG00000004815 IFI47 (ENSBTAG00000015727) ENSBTAG00000050157 ZNF496 (ENSBTAG00000049098) NLRP3 (ENSBTAG00000001273) ENSBTAG00000051477 OR2H10 (ENSBTAG00000039986) OR2B11 (ENSBTAG00000039422) OR2W53 (ENSBTAG00000048813) OR2C3 (ENSBTAG00000048315) OR2C3B (ENSBTAG00000048069) GCSAML (ENSBTAG00000052663) OR2G27 (ENSBTAG00000039484) OR2G28 (ENSBTAG00000039930) ENSBTAG00000030735 ##22 OR2G3 (ENSBTAG00000027911) OR9E2 (ENSBTAG00000039804) OR5AE4 (ENSBTAG00000052311) OR5AE3 (ENSBTAG00000054452) OR6F1 (ENSBTAG00000031412) OR14P2 (ENSBTAG00000045691) OR6AA1 (ENSBTAG00000001761) OR6AN1 (ENSBTAG00000040109) OR11L1 (ENSBTAG00000017725) TRIM58 (ENSBTAG00000007470) OR2W3 (ENSBTAG00000025293) OR2W3D (ENSBTAG00000039797) OR2AO1 (ENSBTAG00000039805) OR2T54 (ENSBTAG00000053872) OR2AK3 (ENSBTAG00000007557) Cow MODERN SPECIES 177 SLC16A2 (ENSBTAG00000002585) ENSBTAG00000051929 RLIM (ENSBTAG00000015630) NEXMIF (ENSBTAG00000000300) ABCB7 (ENSBTAG00000011028) UPRT (ENSBTAG00000004549) ZDHHC15 (ENSBTAG00000008047) MAGEE2 (ENSBTAG00000025062) PBDC1 (ENSBTAG00000003609) ENSBTAG00000051706 ENSBTAG00000046806 FGF16 (ENSBTAG00000006722) ATRX (ENSBTAG00000038434) ENSBTAG00000053487 MAGT1 (ENSBTAG00000045931) COX7B (ENSBTAG00000047768) ##22 ATP7A (ENSBTAG00000010018) PGK1 (ENSBTAG00000000894) TAF9B (ENSBTAG00000000895) ENSBTAG00000026025 ENSBTAG00000051877 CYSLTR1 (ENSBTAG00000024675) ENSBTAG00000035882 LPAR4 (ENSBTAG00000003299) P2RY10 (ENSBTAG00000008555) ENSBTAG00000050883 ENSBTAG00000054002 GPR174 (ENSBTAG00000021437) ENSBTAG00000045678 TBX22 (ENSBTAG00000048060) TENT5D (ENSBTAG00000045653) Bos_a ANCESTRAL SPECIES 19 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00940000154426.b.b.h ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.a.b.a ##22 ENSGT00940000159568 ENSGT00390000008820.e.b.kb ENSGT00940000161697 ENSGT00940000163592 ENSGT00550000074618.a.b.ab.a.a.a.a ENSGT01100000263536.B.c.b ENSGT00390000009948.c.l ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT00390000007560.k.b ENSGT01030000234518.D ENSGT00390000015224.c.a.a.a.t.a.b.a.a ENSGT00940000161206 ENSGT00940000162488 ENSGT00950000183107.a.b.b Domestic yak MODERN SPECIES 69 SLC16A2 (ENSBGRG00000024018) RLIM (ENSBGRG00000023991) NEXMIF (ENSBGRG00000023961) ENSBGRG00000023925 ABCB7 (ENSBGRG00000023373) UPRT (ENSBGRG00000023239) ENSBGRG00000023226 ZDHHC15 (ENSBGRG00000023027) MAGEE2 (ENSBGRG00000022989) ENSBGRG00000022974 PBDC1 (ENSBGRG00000022890) FGF16 (ENSBGRG00000022814) ATRX (ENSBGRG00000016038) ENSBGRG00000015557 MAGT1 (ENSBGRG00000015408) ENSBGRG00000015336 ##22 ATP7A (ENSBGRG00000015150) PGK1 (ENSBGRG00000014778) TAF9B (ENSBGRG00000014722) ENSBGRG00000014446 CYSLTR1 (ENSBGRG00000014355) ENSBGRG00000014334 LPAR4 (ENSBGRG00000014316) P2RY10 (ENSBGRG00000014291) GPR174 (ENSBGRG00000014278) ENSBGRG00000014249 ENSBGRG00000014224 TBX22 (ENSBGRG00000014109) TENT5D (ENSBGRG00000014080) BRWD3 (ENSBGRG00000013595) ENSBGRG00000013533 Wild yak MODERN SPECIES 172 FGF16 (ENSBMUG00000017116) ATRX (ENSBMUG00000017099) ENSBMUG00000017021 MAGT1 (ENSBMUG00000017005) ENSBMUG00000016989 ##22 ATP7A (ENSBMUG00000016980) PGK1 (ENSBMUG00000016916) TAF9B (ENSBMUG00000016896) ENSBMUG00000016872 ENSBMUG00000016853 Bovinae ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.b.b ##22 Bos ANCESTRAL SPECIES 32 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a ENSGT00390000014753 ENSGT00940000161153 ENSGT00940000162022 ENSGT00440000033720.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000016722 ENSGT00940000155212 ENSGT00960000190178 ENSGT00980000198921.a.a ENSGT00410000025556.a.b ENSGT00940000158265 ENSGT00940000155821 ENSGT00390000012178.g.b.b.a.b.b ##22 ENSGT00390000004175 ENSGT00940000153904.a ENSGT00390000009151.i ENSGT01000000214694.A.b ENSGT00950000182965.b ENSGT00950000183035.a.b.a ENSGT00950000182803.B.d.a.j ENSGT00940000159771 ENSGT00940000160879 ENSGT00930000150973.A ENSGT00940000162067.a.a ENSGT00940000158619 ENSGT00510000047168 ENSGT00390000001798.i ENSGT00390000006915.c.c.b Bos_a ANCESTRAL SPECIES 143 ENSGT00980000198921.a.a ENSGT00410000025556.a.b ENSGT00940000158265 ENSGT00940000155821 ENSGT00390000012178.g.b.b.a.b.b ##22 Domestic yak MODERN SPECIES 70 AKAP17A (ENSBGRG00000019461) P2RY8 (ENSBGRG00000019508) ASMTL (ENSBGRG00000007075) SLC25A6 (ENSBGRG00000007164) ENSBGRG00000007226 ENSBGRG00000007304 ENSBGRG00000007359 CRLF2 (ENSBGRG00000007417) SHOX (ENSBGRG00000007528) ENSBGRG00000007677 GTPBP6 (ENSBGRG00000007868) PLCXD1 (ENSBGRG00000008103) WWC3 (ENSBGRG00000008199) CLCN4 (ENSBGRG00000008267) MID1 (ENSBGRG00000008397) ENSBGRG00000008580 ##22 ENSBGRG00000008615 EGFL6 (ENSBGRG00000008638) ENSBGRG00000008712 ENSBGRG00000008725 RAB9A (ENSBGRG00000008766) ENSBGRG00000008778 ENSBGRG00000008898 GPM6B (ENSBGRG00000009564) GEMIN8 (ENSBGRG00000009823) GLRA2 (ENSBGRG00000009906) FANCB (ENSBGRG00000010115) MOSPD2 (ENSBGRG00000010151) ASB9 (ENSBGRG00000010217) ENSBGRG00000010354 VEGFD (ENSBGRG00000010905) Wild yak MODERN SPECIES 2636 ENSBMUG00000010493 ##22 Bos_b ANCESTRAL SPECIES 39 ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.a.b ENSGT01050000244868.a.a.a.b.a.b.a.a.b.b.b ENSGT00940000156607.a.a ENSGT00390000014753 ENSGT00940000161153 ENSGT00940000162022 ENSGT00440000033720.a ENSGT00940000153421.a.a.a.a.b ENSGT00390000016722 ENSGT00940000155212 ENSGT00960000190178 ENSGT00980000198921.a.a ENSGT00410000025556.a.b ENSGT00940000158265 ENSGT00940000155821 ENSGT00390000012178.g.b.b.a.b.b ##22 ENSGT00390000004175 ENSGT00940000153904.a ENSGT00390000009151.i ENSGT01000000214694.A.b ENSGT00950000183035.a.b.a ENSGT00950000182803.B.d.a.j ENSGT00940000159771 ENSGT00940000160879 ENSGT00930000150973.A ENSGT00940000162067.a.a ENSGT00940000158619 ENSGT00510000047168 ENSGT00390000001798.i ENSGT00390000006915.c.c.b ENSGT00390000013608 Hybrid Bos Indicus MODERN SPECIES 315 ENSBIXG00005011152 STS (ENSBIXG00005011080) PNPLA4 (ENSBIXG00005011002) ANOS1 (ENSBIXG00005010908) ENSBIXG00005010818 GPR143 (ENSBIXG00005010743) SHROOM2 (ENSBIXG00005000636) ENSBIXG00005010661 ENSBIXG00005010650 ENSBIXG00005010631 ENSBIXG00005010460 WWC3 (ENSBIXG00005010425) CLCN4 (ENSBIXG00005010373) MID1 (ENSBIXG00005010309) ENSBIXG00005010237 ENSBIXG00005010228 ##22 ARHGAP6 (ENSBIXG00005010176) HCCS (ENSBIXG00005010146) AMELX (ENSBIXG00005010091) ENSBIXG00005010072 MSL3 (ENSBIXG00005010008) FRMPD4 (ENSBIXG00005009833) ENSBIXG00005009647 TLR7 (ENSBIXG00005009598) TLR8 (ENSBIXG00005009578) ENSBIXG00005009560 ENSBIXG00005009511 ENSBIXG00005009503 EGFL6 (ENSBIXG00005006708) ENSBIXG00005009392 RAB9A (ENSBIXG00005009378) Cow MODERN SPECIES 176 ENSBTAG00000050071 ##22 HCCS (ENSBTAG00000012113) ARHGAP6 (ENSBTAG00000002626) AMELX (ENSBTAG00000012089) ENSBTAG00000051129 American bison MODERN SPECIES 2435 ENSBBBG00000005552 ##22 Caprinae ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.a.b ##22 Goat MODERN SPECIES 21 ENSCHIG00000020228 ENSCHIG00000019709 ENSCHIG00000026949 ALDH3B2 (ENSCHIG00000016769) UNC93B1 (ENSCHIG00000026943) ENSCHIG00000026059 ENSCHIG00000013308 TCIRG1 (ENSCHIG00000021975) CHKA (ENSCHIG00000014786) KMT5B (ENSCHIG00000025585) ENSCHIG00000016165 LRP5 (ENSCHIG00000019530) PPP6R3 (ENSCHIG00000020367) GAL (ENSCHIG00000024788) TESMIN (ENSCHIG00000026439) ENSCHIG00000019619 ##22 CPT1A (ENSCHIG00000015344) MRPL21 (ENSCHIG00000020757) IGHMBP2 (ENSCHIG00000011703) ENSCHIG00000008487 MRGPRF (ENSCHIG00000024512) TPCN2 (ENSCHIG00000024724) CCND1 (ENSCHIG00000010534) LTO1 (ENSCHIG00000016576) FGF19 (ENSCHIG00000012980) FGF4 (ENSCHIG00000010447) FGF3 (ENSCHIG00000001606) ANO1 (ENSCHIG00000025110) FADD (ENSCHIG00000008257) ENSCHIG00000020155 PPFIA1 (ENSCHIG00000006687) Yarkand deer DUPLICATION Yarkand deer DUPLICATION Yarkand deer MODERN SPECIES 1323 ENSCHYG00000013216 SLC16A2 (ENSCHYG00000013135) RLIM (ENSCHYG00000013107) NEXMIF (ENSCHYG00000013048) ENSCHYG00000013033 ABCB7 (ENSCHYG00000012079) UPRT (ENSCHYG00000011786) ZDHHC15 (ENSCHYG00000011470) MAGEE2 (ENSCHYG00000011410) ENSCHYG00000011362 ENSCHYG00000011310 FGF16 (ENSCHYG00000011260) ENSCHYG00000011219 ATRX (ENSCHYG00000011090) MAGT1 (ENSCHYG00000010961) ENSCHYG00000010895 ##22 ATP7A (ENSCHYG00000010379) ENSCHYG00000010341 ENSCHYG00000010325 ENSCHYG00000010187 TAF9B (ENSCHYG00000010082) ENSCHYG00000009821 CYSLTR1 (ENSCHYG00000009807) LPAR4 (ENSCHYG00000009794) P2RY10 (ENSCHYG00000009753) GPR174 (ENSCHYG00000009735) ITM2A (ENSCHYG00000009688) TBX22 (ENSCHYG00000009606) ENSCHYG00000009550 TENT5D (ENSCHYG00000009524) ENSCHYG00000009482 Yarkand deer MODERN SPECIES 14 LAG3 (ENSCHYG00000024522) ENSCHYG00000024584 MLF2 (ENSCHYG00000024596) COPS7A (ENSCHYG00000024633) PIANP (ENSCHYG00000024684) ZNF384 (ENSCHYG00000024746) ING4 (ENSCHYG00000024855) ACRBP (ENSCHYG00000024938) LPAR5 (ENSCHYG00000024995) CHD4 (ENSCHYG00000025019) NOP2 (ENSCHYG00000025184) IFFO1 (ENSCHYG00000025348) ENSCHYG00000025387 NCAPD2 (ENSCHYG00000025563) MRPL51 (ENSCHYG00000025676) ENSCHYG00000025696 ##22 ENSCHYG00000025715 TAPBPL (ENSCHYG00000025766) ENSCHYG00000025783 CD27 (ENSCHYG00000025790) LTBR (ENSCHYG00000025819) SCNN1A (ENSCHYG00000025885) TNFRSF1A (ENSCHYG00000025998) PLEKHG6 (ENSCHYG00000026050) CD9 (ENSCHYG00000026113) VWF (ENSCHYG00000026172) ANO2 (ENSCHYG00000026287) NTF3 (ENSCHYG00000026438) KCNA5 (ENSCHYG00000026449) ENSCHYG00000011432 KCNA1 (ENSCHYG00000011459) Yarkand deer MODERN SPECIES 3 RNF212B (ENSCHYG00000014629) HOMEZ (ENSCHYG00000014595) PPP1R3E (ENSCHYG00000014529) PABPN1 (ENSCHYG00000014202) SLC22A17 (ENSCHYG00000013916) EFS (ENSCHYG00000013648) IL25 (ENSCHYG00000013553) ENSCHYG00000013291 ENSCHYG00000013203 MYH7 (ENSCHYG00000012682) NGDN (ENSCHYG00000012516) ZFHX2 (ENSCHYG00000012435) THTPA (ENSCHYG00000012365) AP1G2 (ENSCHYG00000012260) JPH4 (ENSCHYG00000012168) ENSCHYG00000012150 ##22 ENSCHYG00000012105 ENSCHYG00000012084 ENSCHYG00000012053 ENSCHYG00000012023 ENSCHYG00000011583 CARMIL3 (ENSCHYG00000011429) CPNE6 (ENSCHYG00000011191) NRL (ENSCHYG00000011152) PCK2 (ENSCHYG00000010885) DCAF11 (ENSCHYG00000010574) FITM1 (ENSCHYG00000010518) PSME1 (ENSCHYG00000010154) EMC9 (ENSCHYG00000010055) ENSCHYG00000009594 RNF31 (ENSCHYG00000009118) Pecora ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.b ##22 Percora_a ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.b ##22 Siberian musk deer DUPLICATION Siberian musk deer DUPLICATION Siberian musk deer MODERN SPECIES 9 ZCCHC13 (ENSMMSG00000001254) SLC16A2 (ENSMMSG00000001236) RLIM (ENSMMSG00000001223) NEXMIF (ENSMMSG00000001198) ENSMMSG00000001187 ABCB7 (ENSMMSG00000001025) UPRT (ENSMMSG00000000982) ZDHHC15 (ENSMMSG00000000902) MAGEE2 (ENSMMSG00000000878) ENSMMSG00000000865 PBDC1 (ENSMMSG00000000843) ENSMMSG00000000830 FGF16 (ENSMMSG00000000801) ATRX (ENSMMSG00000000633) MAGT1 (ENSMMSG00000000570) ENSMMSG00000000541 ##22 ATP7A (ENSMMSG00000000479) ENSMMSG00000000439 ENSMMSG00000000413 TAF9B (ENSMMSG00000000384) ENSMMSG00000000301 CYSLTR1 (ENSMMSG00000000289) ENSMMSG00000000270 LPAR4 (ENSMMSG00000000242) P2RY10 (ENSMMSG00000000233) GPR174 (ENSMMSG00000000217) ENSMMSG00000000211 TENT5D (ENSMMSG00000000196) ENSMMSG00000000165 BRWD3 (ENSMMSG00000000027) HMGN5 (ENSMMSG00000000002) Siberian musk deer MODERN SPECIES 1194 MSRB2 (ENSMMSG00000009568) ARMC3 (ENSMMSG00000009602) ENSMMSG00000009832 PIP4K2A (ENSMMSG00000009845) SPAG6 (ENSMMSG00000009939) BMI1 (ENSMMSG00000010401) COMMD3 (ENSMMSG00000010440) DNAJC1 (ENSMMSG00000010489) MLLT10 (ENSMMSG00000010556) SKIDA1 (ENSMMSG00000010753) ENSMMSG00000010830 ENSMMSG00000010842 NEBL (ENSMMSG00000010862) ENSMMSG00000011005 PLXDC2 (ENSMMSG00000011036) ENSMMSG00000011128 ##22 MALRD1 (ENSMMSG00000011144) Siberian musk deer MODERN SPECIES 328 CENPP (ENSMMSG00000008957) OGN (ENSMMSG00000009002) ENSMMSG00000009029 OMD (ENSMMSG00000009072) ASPN (ENSMMSG00000009119) ECM2 (ENSMMSG00000009172) IPPK (ENSMMSG00000009229) BICD2 (ENSMMSG00000009303) FGD3 (ENSMMSG00000009438) SUSD3 (ENSMMSG00000011011) CARD19 (ENSMMSG00000011058) NINJ1 (ENSMMSG00000011130) WNK2 (ENSMMSG00000011320) FAM120A (ENSMMSG00000013138) PHF2 (ENSMMSG00000013156) ENSMMSG00000013189 ##22 BARX1 (ENSMMSG00000013194) PTPDC1 (ENSMMSG00000013237) ZNF169 (ENSMMSG00000013319) ENSMMSG00000013343 ENSMMSG00000013370 ENSMMSG00000013382 SPTLC1 (ENSMMSG00000013434) ROR2 (ENSMMSG00000013476) ENSMMSG00000013531 NFIL3 (ENSMMSG00000013545) AUH (ENSMMSG00000013559) SYK (ENSMMSG00000013609) ENSMMSG00000013651 DIRAS2 (ENSMMSG00000013671) GADD45G (ENSMMSG00000013683) Laurasiatheria_b ANCESTRAL SPECIES ENSGT00390000012178.g.b.b ##22 Carnivora ANCESTRAL SPECIES ENSGT00390000012178.g.b.b ##22 Caniformia ANCESTRAL SPECIES ENSGT00390000012178.g.b.b ##22 Canidae ANCESTRAL SPECIES ENSGT00390000012178.g.b.b ##22 Canis_lupus ANCESTRAL SPECIES 13 ENSGT00950000182899.A ENSGT00940000156426 ENSGT00940000155428.f ENSGT00940000160301 ENSGT00950000186311 ENSGT00390000018717.b.a.a ENSGT00940000155666.c ENSGT00390000013444.a.b.a ENSGT00940000161448 ENSGT00390000001607 ENSGT01090000260080.a ENSGT00390000008327 ENSGT00390000014165.c.a.a.h.f.b.a ENSGT00940000154206.b ENSGT00390000014969 ENSGT00390000012178.g.b.b ##22 ENSGT00440000033970 ENSGT00940000154544.b ENSGT00940000158877 ENSGT00390000004965 ENSGT00390000008694.b.b.c.a ENSGT00950000182953.C.c ENSGT00940000158546 ENSGT00390000017668 ENSGT00510000049083.b ENSGT00940000160795 ENSGT00940000157511 ENSGT00940000159443 ENSGT00940000157626 ENSGT00510000049120 ENSGT00390000013178 Dingo MODERN SPECIES 343 LAMP5 (ENSCAFG00020027564) PLCB4 (ENSCAFG00020027572) PLCB1 (ENSCAFG00020027584) ENSCAFG00020027586 TMX4 (ENSCAFG00020000183) ENSCAFG00020000262 HAO1 (ENSCAFG00020000270) BMP2 (ENSCAFG00020000368) FERMT1 (ENSCAFG00020000398) CRLS1 (ENSCAFG00020000734) MCM8 (ENSCAFG00020000771) TRMT6 (ENSCAFG00020000777) ENSCAFG00020000781 CHGB (ENSCAFG00020000789) SHLD1 (ENSCAFG00020000822) ENSCAFG00020000827 ##22 GPCPD1 (ENSCAFG00020000839) PROKR2 (ENSCAFG00020000846) CDS2 (ENSCAFG00020000922) PCNA (ENSCAFG00020001289) ENSCAFG00020001296 SLC23A2 (ENSCAFG00020001322) RASSF2 (ENSCAFG00020001561) PRND (ENSCAFG00020001574) PRNP (ENSCAFG00020001602) ADRA1D (ENSCAFG00020001611) SMOX (ENSCAFG00020001635) ENSCAFG00020001682 RNF24 (ENSCAFG00020001686) PANK2 (ENSCAFG00020001695) MAVS (ENSCAFG00020001723) Dog MODERN SPECIES 16 PAK5 (ENSCAFG00845024949) LAMP5 (ENSCAFG00845025200) PLCB4 (ENSCAFG00845025366) PLCB1 (ENSCAFG00845025883) TMX4 (ENSCAFG00845026769) ENSCAFG00845026888 HAO1 (ENSCAFG00845026925) BMP2 (ENSCAFG00845027004) FERMT1 (ENSCAFG00845027072) ENSCAFG00845027161 MCM8 (ENSCAFG00845027289) TRMT6 (ENSCAFG00845027607) ENSCAFG00845027656 CHGB (ENSCAFG00845027687) SHLD1 (ENSCAFG00845027765) ENSCAFG00845027885 ##22 GPCPD1 (ENSCAFG00845027927) PROKR2 (ENSCAFG00845028125) CDS2 (ENSCAFG00845028177) PCNA (ENSCAFG00845028229) TMEM230 (ENSCAFG00845028266) SLC23A2 (ENSCAFG00845028487) RASSF2 (ENSCAFG00845028911) PRND (ENSCAFG00845029075) PRNP (ENSCAFG00845013725) ADRA1D (ENSCAFG00845013754) SMOX (ENSCAFG00845013771) RNF24 (ENSCAFG00845013808) ENSCAFG00845013820 PANK2 (ENSCAFG00845013830) MAVS (ENSCAFG00845013869) Laurasiatheria_c ANCESTRAL SPECIES 10 ENSGT00940000162554 ENSGT00390000003601.a ENSGT00950000183041.A.f ENSGT00940000159450 ENSGT00940000155753 ENSGT00940000159746 ENSGT00940000156281 ENSGT01020000230412.D ENSGT00940000158214 ENSGT00940000163487 ENSGT00390000016333 ENSGT00940000160087 ENSGT00940000155902 ENSGT00980000202753 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT00940000163592 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b Chiroptera ANCESTRAL SPECIES 28 ENSGT00940000160087 ENSGT00940000155902 ENSGT00980000202753 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b ##22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00390000015224.c.a.a.b ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b Microchiroptera DUPLICATION Microchiroptera ANCESTRAL SPECIES 28 ENSGT00940000160087 ENSGT00940000155902 ENSGT00980000202753 ENSGT00390000012030.b.a ENSGT00390000012178.g.b.b.c ##22 ENSGT00940000159568 ENSGT00940000163576 ENSGT00390000008820.e.b ENSGT00940000161697 ENSGT01100000263536.B.c.b ENSGT01050000245003 ENSGT00940000163808 ENSGT01040000240444.A.a.a.a.b ENSGT01100000263536.A.a.a.b ENSGT01100000263536.A.a.a.a ENSGT01030000234518.D ENSGT00950000183115.b.b ENSGT00940000161206 ENSGT00950000182832.D.b ENSGT00940000162488 Microbat MODERN SPECIES 941 ARHGEF9 (ENSMLUG00000002051) ENSMLUG00000027999 ENSMLUG00000023405 SPIN4 (ENSMLUG00000007170) ENSMLUG00000000361 ENSMLUG00000008292 ENSMLUG00000024793 ENSMLUG00000029783 ENSMLUG00000005846 ENSMLUG00000027225 FGF16 (ENSMLUG00000011190) ENSMLUG00000027761 ENSMLUG00000028355 ENSMLUG00000027763 MAGT1 (ENSMLUG00000008595) ENSMLUG00000022443 ##22 ATP7A (ENSMLUG00000025990) ENSMLUG00000026413 PGK1 (ENSMLUG00000017791) TAF9B (ENSMLUG00000014581) RTL3 (ENSMLUG00000002371) LPAR4 (ENSMLUG00000006096) P2RY10 (ENSMLUG00000010499) ENSMLUG00000025815 GPR174 (ENSMLUG00000005162) ENSMLUG00000025668 ITM2A (ENSMLUG00000010431) TBX22 (ENSMLUG00000016826) ENSMLUG00000024811 TENT5D (ENSMLUG00000000409) BRWD3 (ENSMLUG00000005607) Greater horseshoe bat MODERN SPECIES ZC4H2 (ENSRFEG00010000420) ENSRFEG00010000382 ENSRFEG00010000366 MTMR8 (ENSRFEG00010000342) AMER1 (ENSRFEG00010000332) ENSRFEG00010000325 ARHGEF9 (ENSRFEG00010000258) ENSRFEG00010000214 SPIN4 (ENSRFEG00010000198) ENSRFEG00010000193 FGF16 (ENSRFEG00010000182) ATRX (ENSRFEG00010000118) ENSRFEG00010000095 ENSRFEG00010005487 MAGT1 (ENSRFEG00010005458) ENSRFEG00010005435 ##22 ATP7A (ENSRFEG00010005348) ENSRFEG00010005309 ENSRFEG00010005300 ENSRFEG00010005289 TAF9B (ENSRFEG00010005277) ENSRFEG00010005274 ENSRFEG00010005262 ENSRFEG00010005245 CYSLTR1 (ENSRFEG00010005241) ENSRFEG00010005233 RTL3 (ENSRFEG00010005225) LPAR4 (ENSRFEG00010005218) P2RY10 (ENSRFEG00010005207) GPR174 (ENSRFEG00010005200) ITM2A (ENSRFEG00010005189) Microchiroptera ANCESTRAL SPECIES ENSGT00390000012178.g.b.b.d ##22 Greater horseshoe bat MODERN SPECIES 6 DACT3 (ENSRFEG00010011826) PRKD2 (ENSRFEG00010011924) STRN4 (ENSRFEG00010012035) FKRP (ENSRFEG00010012506) SLC1A5 (ENSRFEG00010012525) AP2S1 (ENSRFEG00010012755) ARHGAP35 (ENSRFEG00010013104) NPAS1 (ENSRFEG00010013143) TMEM160 (ENSRFEG00010013212) ZC3H4 (ENSRFEG00010013266) SAE1 (ENSRFEG00010013378) ENSRFEG00010013509 CCDC9 (ENSRFEG00010013812) ENSRFEG00010013918 C5AR1 (ENSRFEG00010013939) ENSRFEG00010013958 ##22 C5AR2 (ENSRFEG00010013977) DHX34 (ENSRFEG00010014000) MEIS3 (ENSRFEG00010014079) SLC8A2 (ENSRFEG00010014268) KPTN (ENSRFEG00010014307) NAPA (ENSRFEG00010014363) ZNF541 (ENSRFEG00010014459) BICRA (ENSRFEG00010014745) EHD2 (ENSRFEG00010015006) NOP53 (ENSRFEG00010015079) SELENOW (ENSRFEG00010005319) CRX (ENSRFEG00010005332) SULT2A1 (ENSRFEG00010005353) ENSRFEG00010005368 CABP5 (ENSRFEG00010005387) Microbat MODERN SPECIES 1284 SCUBE3 (ENSMLUG00000008561) ZNF76 (ENSMLUG00000008610) DEF6 (ENSMLUG00000008624) PPARD (ENSMLUG00000010594) ENSMLUG00000023455 ENSMLUG00000024807 FKBP5 (ENSMLUG00000011255) ARMC12 (ENSMLUG00000005100) ENSMLUG00000022424 ##22 ENSMLUG00000010934 CLPS (ENSMLUG00000010948) LHFPL5 (ENSMLUG00000010960) SRPK1 (ENSMLUG00000010974) SLC26A8 (ENSMLUG00000003668) MAPK14 (ENSMLUG00000005967) ENSMLUG00000024504 BRPF3 (ENSMLUG00000002418) PNPLA1 (ENSMLUG00000000853) BNIP5 (ENSMLUG00000000855) ENSMLUG00000000866 KCTD20 (ENSMLUG00000007139) STK38 (ENSMLUG00000007149) Megabat MODERN SPECIES 3736 MAGT1 (ENSPVAG00000003236) COX7B (ENSPVAG00000003237) ##22