Euarchontoglires	ANCESTRAL SPECIES	8	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Euarchontoglires_A	ANCESTRAL SPECIES	8	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Glires	ANCESTRAL SPECIES	7	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Rodentia	ANCESTRAL SPECIES	7	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Rodentia_A	ANCESTRAL SPECIES	7	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Sciuridae	ANCESTRAL SPECIES	32	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Eurasian red squirrel	MODERN SPECIES	15	TTC23L (ENSSVLG00005008797) #7	RAD1 (ENSSVLG00005008756) #8	BRIX1 (ENSSVLG00005008728) #9	DNAJC21 (ENSSVLG00005008691) #10	ENSSVLG00005008670 #11	AGXT2 (ENSSVLG00005008530) #12	PRLR (ENSSVLG00005008333) #13	SPEF2 (ENSSVLG00005007810) #14	IL7R (ENSSVLG00005007570) #15	CAPSL (ENSSVLG00005007506) #16	LMBRD2 (ENSSVLG00005007437) #17	SKP2 (ENSSVLG00005007355) #18	NADK2 (ENSSVLG00005007272) #19	RANBP3L (ENSSVLG00005007099) #20	SLC1A3 (ENSSVLG00005006904) #21	NIPBL (ENSSVLG00005006788) #22	ENSSVLG00005006738 #23	ENSSVLG00005006709 #24	CPLANE1 (ENSSVLG00005006661) #25	NUP155 (ENSSVLG00005006573) #26	ENSSVLG00005006521 #27	WDR70 (ENSSVLG00005006404) #28	GDNF (ENSSVLG00005006351) #29	EGFLAM (ENSSVLG00005006208) #30	LIFR (ENSSVLG00005006057) #31	ENSSVLG00005006034 #32	ENSSVLG00005006015 #33	RICTOR (ENSSVLG00005005561) #34	FYB1 (ENSSVLG00005005277) #35	ENSSVLG00005005217 #36	C9 (ENSSVLG00005005172) #37
Marmotini	ANCESTRAL SPECIES	71	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Marmotini_b	ANCESTRAL SPECIES	102	ENSGT00940000161378	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Squirrel	MODERN SPECIES	118	AMACR (ENSSTOG00000015060)	C1QTNF3 (ENSSTOG00000019700)	RAI14 (ENSSTOG00000023891)	RAD1 (ENSSTOG00000009593) #8	BRIX1 (ENSSTOG00000009600) #9	DNAJC21 (ENSSTOG00000009616) #10	AGXT2 (ENSSTOG00000008427) #12	PRLR (ENSSTOG00000008443) #13	SPEF2 (ENSSTOG00000011158) #14	CAPSL (ENSSTOG00000011632) #16	LMBRD2 (ENSSTOG00000002718) #17	SKP2 (ENSSTOG00000002739) #18	NADK2 (ENSSTOG00000002754) #19	RANBP3L (ENSSTOG00000002767) #20	SLC1A3 (ENSSTOG00000015072) #21	NIPBL (ENSSTOG00000014981) #22	CPLANE1 (ENSSTOG00000015341) #25	NUP155 (ENSSTOG00000015151) #26	WDR70 (ENSSTOG00000005031) #28	GDNF (ENSSTOG00000028754) #29	ENSSTOG00000032013	EGFLAM (ENSSTOG00000012561) #30	LIFR (ENSSTOG00000012582) #31	OSMR (ENSSTOG00000005685) #32	RICTOR (ENSSTOG00000005716) #34	ENSSTOG00000028890	C9 (ENSSTOG00000002454) #37	DAB2 (ENSSTOG00000002461)	ENSSTOG00000028948	PTGER4 (ENSSTOG00000024710)	TTC33 (ENSSTOG00000025089)
Arctic ground squirrel	MODERN SPECIES	253										CAPSL (ENSUPAG00010014761) #16	LMBRD2 (ENSUPAG00010014686) #17	SKP2 (ENSUPAG00010014629) #18	NADK2 (ENSUPAG00010014557) #19	RANBP3L (ENSUPAG00010014545) #20	SLC1A3 (ENSUPAG00010014513) #21	NIPBL (ENSUPAG00010014346) #22	CPLANE1 (ENSUPAG00010014108) #25	NUP155 (ENSUPAG00010014037) #26	WDR70 (ENSUPAG00010013979) #28	GDNF (ENSUPAG00010013969) #29	EGFLAM (ENSUPAG00010013916) #30	LIFR (ENSUPAG00010013890) #31	OSMR (ENSUPAG00010013876) #32	RICTOR (ENSUPAG00010013763) #34	FYB1 (ENSUPAG00010013738) #35	ENSUPAG00010013729
Alpin marmot	MODERN SPECIES	44	TTC23L (ENSMMMG00000003108) #7	RAD1 (ENSMMMG00000003078) #8	BRIX1 (ENSMMMG00000003063) #9	DNAJC21 (ENSMMMG00000003040) #10	AGXT2 (ENSMMMG00000002975) #12	PRLR (ENSMMMG00000002932) #13	ENSMMMG00000002868 #14	ENSMMMG00000002836 #15	ENSMMMG00000002727 #15	CAPSL (ENSMMMG00000002701) #16	LMBRD2 (ENSMMMG00000002638) #17	SKP2 (ENSMMMG00000002584) #18	NADK2 (ENSMMMG00000002432) #19	RANBP3L (ENSMMMG00000002394) #20	SLC1A3 (ENSMMMG00000002366) #21	NIPBL (ENSMMMG00000002298) #22	CPLANE1 (ENSMMMG00000002202) #25	NUP155 (ENSMMMG00000002057) #26	WDR70 (ENSMMMG00000002008) #28	GDNF (ENSMMMG00000001995) #29	EGFLAM (ENSMMMG00000001898) #30	LIFR (ENSMMMG00000001748) #31	OSMR (ENSMMMG00000001500) #32	RICTOR (ENSMMMG00000001395) #34	FYB1 (ENSMMMG00000001335) #35	C9 (ENSMMMG00000001324) #37	DAB2 (ENSMMMG00000001159)
Hystricomorpha	ANCESTRAL SPECIES	31	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Hystricomorpha_a	ANCESTRAL SPECIES	29	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000155567.de	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a	ENSGT00940000162106
Hystricomorpha_b	ANCESTRAL SPECIES	60	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000155567.de	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a	ENSGT00940000162106
Long-tailed chinchilla	MODERN SPECIES	133	RAI14 (ENSCLAG00000010437)	TTC23L (ENSCLAG00000006825) #7	RAD1 (ENSCLAG00000007717) #8	BRIX1 (ENSCLAG00000008124) #9	DNAJC21 (ENSCLAG00000011176) #10	AGXT2 (ENSCLAG00000007004) #12	PRLR (ENSCLAG00000008700) #13	SPEF2 (ENSCLAG00000009013) #14	IL7R (ENSCLAG00000015625) #15	CAPSL (ENSCLAG00000009017) #16	LMBRD2 (ENSCLAG00000011208) #17	SKP2 (ENSCLAG00000014622) #18	NADK2 (ENSCLAG00000007509) #19	RANBP3L (ENSCLAG00000011000) #20	SLC1A3 (ENSCLAG00000011675) #21	NIPBL (ENSCLAG00000009826) #22	CPLANE1 (ENSCLAG00000010572) #25	NUP155 (ENSCLAG00000010580) #26	WDR70 (ENSCLAG00000012915) #28	GDNF (ENSCLAG00000013976) #29	EGFLAM (ENSCLAG00000011146) #30	LIFR (ENSCLAG00000008192) #31	OSMR (ENSCLAG00000008932) #32	RICTOR (ENSCLAG00000007847) #34	FYB1 (ENSCLAG00000012441) #35	ENSCLAG00000015330	ENSCLAG00000007996	PTGER4 (ENSCLAG00000014156)	TTC33 (ENSCLAG00000009002)	PRKAA1 (ENSCLAG00000009683)	RPL37 (ENSCLAG00000008803)
Degu	MODERN SPECIES	43					ENSODEG00000017833 #14	IL7R (ENSODEG00000017590) #15	CAPSL (ENSODEG00000017724) #16	UGT3A2 (ENSODEG00000017596)	ENSODEG00000017331	LMBRD2 (ENSODEG00000017584) #17	SKP2 (ENSODEG00000017346) #18	ENSODEG00000017341	ENSODEG00000017427 #20	ENSODEG00000017391	SLC1A3 (ENSODEG00000017216) #21	NIPBL (ENSODEG00000017351) #22	CPLANE1 (ENSODEG00000017720) #25	NUP155 (ENSODEG00000017480) #26	ENSODEG00000017505	WDR70 (ENSODEG00000017279) #28	GDNF (ENSODEG00000017491) #29	ENSODEG00000020500	EGFLAM (ENSODEG00000017406) #30	LIFR (ENSODEG00000017477) #31	OSMR (ENSODEG00000017295) #32	RICTOR (ENSODEG00000017133) #34	FYB1 (ENSODEG00000017404) #35	ENSODEG00000017298	ENSODEG00000017255	TMCO5A (ENSODEG00000017946)	ENSODEG00000017175
Guinea pig	MODERN SPECIES	29	RAI14 (ENSCPOG00000009276)	TTC23L (ENSCPOG00000021477) #7	RAD1 (ENSCPOG00000039837) #8	BRIX1 (ENSCPOG00000022064) #9	ENSCPOG00000006471	AGXT2 (ENSCPOG00000008765) #12	PRLR (ENSCPOG00000035076) #13	ENSCPOG00000009468 #14	IL7R (ENSCPOG00000040614) #15	CAPSL (ENSCPOG00000007724) #16	LMBRD2 (ENSCPOG00000038006) #17	ENSCPOG00000013303 #18	NADK2 (ENSCPOG00000013309) #19	RANBP3L (ENSCPOG00000014458) #20	SLC1A3 (ENSCPOG00000007462) #21	NIPBL (ENSCPOG00000008170) #22	ENSCPOG00000021336 #25	NUP155 (ENSCPOG00000008800) #26	WDR70 (ENSCPOG00000015400) #28	GDNF (ENSCPOG00000034063) #29	EGFLAM (ENSCPOG00000002020) #30	LIFR (ENSCPOG00000000803) #31	OSMR (ENSCPOG00000015086) #32	RICTOR (ENSCPOG00000039121) #34	FYB1 (ENSCPOG00000003694) #35	ENSCPOG00000008684	PTGER4 (ENSCPOG00000000716)	TTC33 (ENSCPOG00000039296)	PRKAA1 (ENSCPOG00000005446)	RPL37 (ENSCPOG00000040164)	C7 (ENSCPOG00000015671)
Naked mole-rat female	MODERN SPECIES	7	AGXT2 (ENSHGLG00000003288) #12	PRLR (ENSHGLG00000009051) #13	ENSHGLG00000007072	SPEF2 (ENSHGLG00000029358) #14	IL7R (ENSHGLG00000047499) #15	ENSHGLG00000004787	CAPSL (ENSHGLG00000004701) #16	LMBRD2 (ENSHGLG00000003754) #17	SKP2 (ENSHGLG00000003646) #18	NADK2 (ENSHGLG00000002659) #19	RANBP3L (ENSHGLG00000012032) #20	ENSHGLG00000047940	ENSHGLG00000039421	ENSHGLG00000048659	SLC1A3 (ENSHGLG00000011585) #21	NIPBL (ENSHGLG00000010862) #22	CPLANE1 (ENSHGLG00000008523) #25	ENSHGLG00000007110	NUP155 (ENSHGLG00000011918) #26	ENSHGLG00000042227	WDR70 (ENSHGLG00000007995) #28	ENSHGLG00000045283 #29	EGFLAM (ENSHGLG00000003265) #30	LIFR (ENSHGLG00000002688) #31	OSMR (ENSHGLG00000002225) #32	ENSHGLG00000038546	RICTOR (ENSHGLG00000004986) #34	ENSHGLG00000049355	ENSHGLG00000003910 #35	C9 (ENSHGLG00000003707) #37	DAB2 (ENSHGLG00000003257)
Rodentia_B	ANCESTRAL SPECIES	4	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Myomorpha	ANCESTRAL SPECIES	5	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Muroidea	ANCESTRAL SPECIES	4	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Muroidea_A	ANCESTRAL SPECIES	11	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Cricetidae	ANCESTRAL SPECIES	11	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Cricetidae_B	ANCESTRAL SPECIES	37	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Northern American deer mouse	MODERN SPECIES	6	Capsl (ENSPEMG00000011650) #16	ENSPEMG00000024009	ENSPEMG00000028702	ENSPEMG00000015486	ENSPEMG00000013389	ENSPEMG00000029840	Cdh9 (ENSPEMG00000022860)	ENSPEMG00000023652	ENSPEMG00000013123	ENSPEMG00000029009	Lmbrd2 (ENSPEMG00000007175) #17	Skp2 (ENSPEMG00000019228) #18	Nadk2 (ENSPEMG00000011766) #19	Ranbp3l (ENSPEMG00000002400) #20	Slc1a3 (ENSPEMG00000000375) #21	Nipbl (ENSPEMG00000020126) #22	Cplane1 (ENSPEMG00000019802) #25	Nup155 (ENSPEMG00000019707) #26	Wdr70 (ENSPEMG00000008794) #28	Gdnf (ENSPEMG00000027275) #29	Egflam (ENSPEMG00000017044) #30	Lifr (ENSPEMG00000004406) #31	ENSPEMG00000030395	Osmr (ENSPEMG00000008906) #32	Rictor (ENSPEMG00000000667) #34	ENSPEMG00000014848	Fyb (ENSPEMG00000001686) #35	C9 (ENSPEMG00000008329) #37	Dab2 (ENSPEMG00000013156)	ENSPEMG00000030159	Ptger4 (ENSPEMG00000028671)
Prairie vole	MODERN SPECIES	6	Rad1 (ENSMOCG00000021129) #8	Brix1 (ENSMOCG00000018798) #9	Dnajc21 (ENSMOCG00000011153) #10	Agxt2 (ENSMOCG00000012490) #12	Prlr (ENSMOCG00000021296) #13	Spef2 (ENSMOCG00000000309) #14	Il7r (ENSMOCG00000000984) #15	Capsl (ENSMOCG00000012675) #16	ENSMOCG00000007394	ENSMOCG00000022525	Lmbrd2 (ENSMOCG00000014813) #17	Skp2 (ENSMOCG00000008331) #18	Nadk2 (ENSMOCG00000019506) #19	Ranbp3l (ENSMOCG00000018661) #20	Slc1a3 (ENSMOCG00000000262) #21	Nipbl (ENSMOCG00000000456) #22	ENSMOCG00000018878	Cplane1 (ENSMOCG00000004713) #25	Nup155 (ENSMOCG00000014018) #26	Wdr70 (ENSMOCG00000000693) #28	Gdnf (ENSMOCG00000016819) #29	Egflam (ENSMOCG00000016024) #30	Lifr (ENSMOCG00000021812) #31	Osmr (ENSMOCG00000017794) #32	Rictor (ENSMOCG00000018257) #34	Fyb (ENSMOCG00000000549) #35	C9 (ENSMOCG00000018405) #37	ENSMOCG00000022736	ENSMOCG00000000823	Ptger4 (ENSMOCG00000017627)	Ttc33 (ENSMOCG00000016527)
Cricetinae	ANCESTRAL SPECIES	7	ENSGT00940000157400	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.b
Chinese hamster chok1gshd	MODERN SPECIES	1	Ttc23l (ENSCGRG00001024333) #7	Rad1 (ENSCGRG00001011029) #8	Brix1 (ENSCGRG00001007932) #9	Dnajc21 (ENSCGRG00001020440) #10	Agxt2 (ENSCGRG00001020038) #12	Prlr (ENSCGRG00001006147) #13	Spef2 (ENSCGRG00001023075) #14	Il7r (ENSCGRG00001016104) #15	Capsl (ENSCGRG00001008670) #16	Lmbrd2 (ENSCGRG00001023603) #17	Skp2 (ENSCGRG00001022106) #18	Nadk2 (ENSCGRG00001022039) #19	Ranbp3l (ENSCGRG00001024211) #20	Slc1a3 (ENSCGRG00001011815) #21	ENSCGRG00001008847	Nipbl (ENSCGRG00001024039) #22	Cplane1 (ENSCGRG00001023647) #25	Nup155 (ENSCGRG00001023185) #26	Wdr70 (ENSCGRG00001024618) #28	Gdnf (ENSCGRG00001024149) #29	ENSCGRG00001024626	ENSCGRG00001024378	Egflam (ENSCGRG00001023724) #30	Lifr (ENSCGRG00001003293) #31	Osmr (ENSCGRG00001017859) #32	Rictor (ENSCGRG00001009015) #34	Fyb (ENSCGRG00001022410) #35	C9 (ENSCGRG00001021695) #37	Dab2 (ENSCGRG00001021141)	ENSCGRG00001012741	ENSCGRG00001008646
Golden Hamster	MODERN SPECIES	695	C1qtnf3 (ENSMAUG00000018568)	Rai14 (ENSMAUG00000013114)	Ttc23l (ENSMAUG00000015262) #7	Rad1 (ENSMAUG00000020278) #8	Dnajc21 (ENSMAUG00000009009) #10	Agxt2 (ENSMAUG00000015037) #12	Prlr (ENSMAUG00000016749) #13	Spef2 (ENSMAUG00000013955) #14	Il7r (ENSMAUG00000016037) #15	Capsl (ENSMAUG00000020720) #16	Lmbrd2 (ENSMAUG00000014866) #17	Skp2 (ENSMAUG00000001989) #18	Nadk2 (ENSMAUG00000022071) #19	ENSMAUG00000022209 #20	Slc1a3 (ENSMAUG00000009752) #21	Nipbl (ENSMAUG00000017640) #22	Cplane1 (ENSMAUG00000001083) #25	Nup155 (ENSMAUG00000003381) #26	Wdr70 (ENSMAUG00000007958) #28	Gdnf (ENSMAUG00000019401) #29	Egflam (ENSMAUG00000015382) #30	Lifr (ENSMAUG00000015733) #31	Osmr (ENSMAUG00000019728) #32	Rictor (ENSMAUG00000013015) #34	Fyb (ENSMAUG00000001181) #35	C9 (ENSMAUG00000018301) #37	ENSMAUG00000015397	Ptger4 (ENSMAUG00000014264)	Ptchd1 (ENSMAUG00000002646)	Prdx4 (ENSMAUG00000021607)	ENSMAUG00000008759
Murinae	ANCESTRAL SPECIES	24	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Mus	ANCESTRAL SPECIES	22	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B.e #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Mus_A	ANCESTRAL SPECIES	13	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B.e #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263.m.a	ENSGT00940000161263.m.b	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Mus_B	ANCESTRAL SPECIES	12	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B.e #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263.m.a.b	ENSGT00940000161263.m.b	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865.g	ENSGT00940000158865.h
Mouse	MODERN SPECIES	6	Rad1 (ENSMUSG00000022248) #8	Brix1 (ENSMUSG00000022247) #9	Dnajc21 (ENSMUSG00000044224) #10	Agxt2 (ENSMUSG00000089678) #12	Prlr (ENSMUSG00000005268) #13	Spef2 (ENSMUSG00000072663) #14	Il7r (ENSMUSG00000003882) #15	Capsl (ENSMUSG00000039676) #16	Ugt3a2 (ENSMUSG00000049152)	Ugt3a1 (ENSMUSG00000072664)	Lmbrd2 (ENSMUSG00000039704) #17	Skp2 (ENSMUSG00000054115) #18	Nadk2 (ENSMUSG00000022253) #19	Ranbp3l (ENSMUSG00000048424) #20	Slc1a3 (ENSMUSG00000005360) #21	Nipbl (ENSMUSG00000022141) #22	Cplane1 (ENSMUSG00000039801) #25	Nup155 (ENSMUSG00000022142) #26	Wdr70 (ENSMUSG00000039828) #28	Gdnf (ENSMUSG00000022144) #29	Egflam (ENSMUSG00000042961) #30	Lifr (ENSMUSG00000054263) #31	Osmr (ENSMUSG00000022146) #32	Rictor (ENSMUSG00000050310) #34	Fyb (ENSMUSG00000022148) #35	C9 (ENSMUSG00000022149) #37	Dab2 (ENSMUSG00000022150)	Ptger4 (ENSMUSG00000039942)	Ttc33 (ENSMUSG00000022151)	Prkaa1 (ENSMUSG00000050697)	Rpl37 (ENSMUSG00000041841)
Mus_C	ANCESTRAL SPECIES	28	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B.e #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263.m.a.b	ENSGT00940000161263.m.b	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865.g	ENSGT00940000158865.h
spretus	MODERN SPECIES	6	Brix1 (MGP_SPRETEiJ_G0020562) #9	Dnajc21 (MGP_SPRETEiJ_G0020561) #10	Agxt2 (MGP_SPRETEiJ_G0020560) #12	MGP_SPRETEiJ_G0020559 #13	Prlr (MGP_SPRETEiJ_G0020558) #13	MGP_SPRETEiJ_G0020557 #14	Il7r (MGP_SPRETEiJ_G0020556) #15	Capsl (MGP_SPRETEiJ_G0020555) #16	MGP_SPRETEiJ_G0020554	Ugt3a1 (MGP_SPRETEiJ_G0020553)	Lmbrd2 (MGP_SPRETEiJ_G0020552) #17	Skp2 (MGP_SPRETEiJ_G0020551) #18	Nadk2 (MGP_SPRETEiJ_G0020550) #19	Ranbp3l (MGP_SPRETEiJ_G0020549) #20	Slc1a3 (MGP_SPRETEiJ_G0020548) #21	Nipbl (MGP_SPRETEiJ_G0020547) #22	Cplane1 (MGP_SPRETEiJ_G0020546) #25	Nup155 (MGP_SPRETEiJ_G0020545) #26	Wdr70 (MGP_SPRETEiJ_G0020544) #28	Gdnf (MGP_SPRETEiJ_G0020543) #29	Egflam (MGP_SPRETEiJ_G0020542) #30	Lifr (MGP_SPRETEiJ_G0020541) #31	Osmr (MGP_SPRETEiJ_G0020540) #32	Rictor (MGP_SPRETEiJ_G0020539) #34	Fyb (MGP_SPRETEiJ_G0020538) #35	C9 (MGP_SPRETEiJ_G0020537) #37	Dab2 (MGP_SPRETEiJ_G0020536)	Ptger4 (MGP_SPRETEiJ_G0020535)	Ttc33 (MGP_SPRETEiJ_G0020534)	MGP_SPRETEiJ_G0020533	Rpl37 (MGP_SPRETEiJ_G0020532)
Steppe mouse	MODERN SPECIES	3011			Il7r (ENSMSIG00000030891) #15	Capsl (ENSMSIG00000030897) #16	ENSMSIG00000030898	Ugt3a2 (ENSMSIG00000030899)	ENSMSIG00000030908	ENSMSIG00000030913	ENSMSIG00000030917	Lmbrd2 (ENSMSIG00000030920) #17	Skp2 (ENSMSIG00000030934) #18	Nadk2 (ENSMSIG00000030950) #19	Ranbp3l (ENSMSIG00000030958) #20	Slc1a3 (ENSMSIG00000030979) #21	ENSMSIG00000030989	Nipbl (ENSMSIG00000030991) #22	Cplane1 (ENSMSIG00000031010) #25	Nup155 (ENSMSIG00000031024) #26
Ryukyu mouse	MODERN SPECIES	6	Brix1 (MGP_CAROLIEiJ_G0019665) #9	MGP_CAROLIEiJ_G0019664 #10	Agxt2 (MGP_CAROLIEiJ_G0019663) #12	MGP_CAROLIEiJ_G0019662 #13	Prlr (MGP_CAROLIEiJ_G0019661) #13	MGP_CAROLIEiJ_G0019660 #14	Il7r (MGP_CAROLIEiJ_G0019659) #15	Capsl (MGP_CAROLIEiJ_G0019658) #16	MGP_CAROLIEiJ_G0019657	MGP_CAROLIEiJ_G0019656	Lmbrd2 (MGP_CAROLIEiJ_G0019655) #17	Skp2 (MGP_CAROLIEiJ_G0019654) #18	Nadk2 (MGP_CAROLIEiJ_G0019653) #19	MGP_CAROLIEiJ_G0019652 #20	Slc1a3 (MGP_CAROLIEiJ_G0019651) #21	Nipbl (MGP_CAROLIEiJ_G0019650) #22	Cplane1 (MGP_CAROLIEiJ_G0019649) #25	Nup155 (MGP_CAROLIEiJ_G0019648) #26	Wdr70 (MGP_CAROLIEiJ_G0019647) #28	Gdnf (MGP_CAROLIEiJ_G0019646) #29	Egflam (MGP_CAROLIEiJ_G0019645) #30	Lifr (MGP_CAROLIEiJ_G0019644) #31	Osmr (MGP_CAROLIEiJ_G0019643) #32	Rictor (MGP_CAROLIEiJ_G0019642) #34	Fyb (MGP_CAROLIEiJ_G0019641) #35	C9 (MGP_CAROLIEiJ_G0019640) #37	Dab2 (MGP_CAROLIEiJ_G0019639)	Ptger4 (MGP_CAROLIEiJ_G0019638)	MGP_CAROLIEiJ_G0019637	Prkaa1 (MGP_CAROLIEiJ_G0019636)	Rpl37 (MGP_CAROLIEiJ_G0019635)
Shrew mouse	MODERN SPECIES	2	Rad1 (MGP_PahariEiJ_G0016046) #8	MGP_PahariEiJ_G0016045 #9	Dnajc21 (MGP_PahariEiJ_G0016044) #10	Agxt2 (MGP_PahariEiJ_G0016043) #12	MGP_PahariEiJ_G0016042 #13	Prlr (MGP_PahariEiJ_G0016041) #13	MGP_PahariEiJ_G0016040 #14	Il7r (MGP_PahariEiJ_G0016039) #15	Capsl (MGP_PahariEiJ_G0016038) #16	MGP_PahariEiJ_G0016037	Lmbrd2 (MGP_PahariEiJ_G0016036) #17	Skp2 (MGP_PahariEiJ_G0016035) #18	Nadk2 (MGP_PahariEiJ_G0016034) #19	MGP_PahariEiJ_G0016033 #20	Slc1a3 (MGP_PahariEiJ_G0016032) #21	Nipbl (MGP_PahariEiJ_G0016031) #22	Cplane1 (MGP_PahariEiJ_G0016030) #25	Nup155 (MGP_PahariEiJ_G0016029) #26	Wdr70 (MGP_PahariEiJ_G0016028) #28	Gdnf (MGP_PahariEiJ_G0016027) #29	Egflam (MGP_PahariEiJ_G0016026) #30	Lifr (MGP_PahariEiJ_G0016025) #31	Osmr (MGP_PahariEiJ_G0016024) #32	Rictor (MGP_PahariEiJ_G0016023) #34	Fyb (MGP_PahariEiJ_G0016022) #35	C9 (MGP_PahariEiJ_G0016021) #37	Dab2 (MGP_PahariEiJ_G0016020)	Ptger4 (MGP_PahariEiJ_G0016019)	Ttc33 (MGP_PahariEiJ_G0016018)	Prkaa1 (MGP_PahariEiJ_G0016017)	Rpl37 (MGP_PahariEiJ_G0016016)
Rat	MODERN SPECIES	11	Dnajc21 (ENSRNOG00000017876) #10	Agxt2 (ENSRNOG00000017821) #12	Prlr (ENSRNOG00000057557) #13	ENSRNOG00000065396	Spef2 (ENSRNOG00000058275) #14	Il7r (ENSRNOG00000065741) #15	Capsl (ENSRNOG00000054277) #16	Ugt3a2 (ENSRNOG00000059568)	Lmbrd2 (ENSRNOG00000054751) #17	Skp2 (ENSRNOG00000059059) #18	Nadk2 (ENSRNOG00000054157) #19	ENSRNOG00000068920	Ranbp3l (ENSRNOG00000052173) #20	Slc1a3 (ENSRNOG00000016163) #21	AABR07008421.1 (ENSRNOG00000030748)	Nipbl (ENSRNOG00000056907) #22	Cplane1 (ENSRNOG00000042118) #25	Nup155 (ENSRNOG00000013411) #26	Wdr70 (ENSRNOG00000013336) #28	Gdnf (ENSRNOG00000012819) #29	Egflam (ENSRNOG00000012058) #30	Lifr (ENSRNOG00000011696) #31	Osmr (ENSRNOG00000033192) #32	Rictor (ENSRNOG00000011341) #34	Fyb1 (ENSRNOG00000013886) #35	C9 (ENSRNOG00000013736) #37	Dab2 (ENSRNOG00000028930)	ENSRNOG00000063101	Rps15al4 (ENSRNOG00000052207)	Ptger4 (ENSRNOG00000013240)	Ttc33 (ENSRNOG00000013217)
Upper Galilee mountains blind mole rat	MODERN SPECIES	1183							ENSNGAG00000018242 #14	Il7r (ENSNGAG00000000177) #15	Capsl (ENSNGAG00000002404) #16	ENSNGAG00000017914	Lmbrd2 (ENSNGAG00000000092) #17	Skp2 (ENSNGAG00000002105) #18	Nadk2 (ENSNGAG00000012720) #19	ENSNGAG00000016646 #20	Slc1a3 (ENSNGAG00000018048) #21	Nipbl (ENSNGAG00000018174) #22	Cplane1 (ENSNGAG00000014748) #25	Nup155 (ENSNGAG00000001345) #26	Wdr70 (ENSNGAG00000013618) #28	Gdnf (ENSNGAG00000017460) #29	Egflam (ENSNGAG00000019890) #30	Lifr (ENSNGAG00000006273) #31	ENSNGAG00000009080	Osmr (ENSNGAG00000016413) #32	Rictor (ENSNGAG00000000546) #34	Fyb (ENSNGAG00000008827) #35	C9 (ENSNGAG00000013631) #37	ENSNGAG00000018186	ENSNGAG00000017678	Ptger4 (ENSNGAG00000002797)	Ttc33 (ENSNGAG00000005682)
Lesser Egyptian jerboa	MODERN SPECIES	48	Dnajc21 (ENSJJAG00000019642) #10	Agxt2 (ENSJJAG00000017162) #12	Prlr (ENSJJAG00000004948) #13	ENSJJAG00000014652	ENSJJAG00000009870 #14	Il7r (ENSJJAG00000015821) #15	Capsl (ENSJJAG00000024164) #16	ENSJJAG00000023154	ENSJJAG00000002933	Lmbrd2 (ENSJJAG00000011271) #17	Skp2 (ENSJJAG00000014879) #18	Nadk2 (ENSJJAG00000023107) #19	ENSJJAG00000007978 #20	ENSJJAG00000012664	Slc1a3 (ENSJJAG00000011327) #21	Nipbl (ENSJJAG00000022683) #22	Cplane1 (ENSJJAG00000021533) #25	Nup155 (ENSJJAG00000020587) #26	Wdr70 (ENSJJAG00000000410) #28	Gdnf (ENSJJAG00000024134) #29	Egflam (ENSJJAG00000017564) #30	Lifr (ENSJJAG00000018296) #31	Osmr (ENSJJAG00000011588) #32	Rictor (ENSJJAG00000014049) #34	Fyb (ENSJJAG00000016416) #35	ENSJJAG00000000928 #37	ENSJJAG00000018434	ENSJJAG00000011581	Ptger4 (ENSJJAG00000023417)	ENSJJAG00000007891	Prkaa1 (ENSJJAG00000021671)
Kangaroo rat	MODERN SPECIES	360	Rai14 (ENSDORG00000009364)	Ttc23l (ENSDORG00000009367) #7	Rad1 (ENSDORG00000009368) #8	Brix1 (ENSDORG00000009369) #9	Dnajc21 (ENSDORG00000009370) #10	Agxt2 (ENSDORG00000009372) #12	Prlr (ENSDORG00000003846) #13	ENSDORG00000009555 #14	Il7r (ENSDORG00000030122) #15	Capsl (ENSDORG00000009565) #16	Lmbrd2 (ENSDORG00000013092) #17	Skp2 (ENSDORG00000013094) #18	Nadk2 (ENSDORG00000013100) #19	ENSDORG00000029340 #20	Slc1a3 (ENSDORG00000016590) #21	Nipbl (ENSDORG00000002543) #22	Nup155 (ENSDORG00000009542) #26	Wdr70 (ENSDORG00000008417) #28	Gdnf (ENSDORG00000027984) #29	Egflam (ENSDORG00000016165) #30	Lifr (ENSDORG00000016168) #31	Osmr (ENSDORG00000010368) #32	Rictor (ENSDORG00000010369) #34	Fyb (ENSDORG00000015775) #35	ENSDORG00000006875	Ptger4 (ENSDORG00000005762)	Ttc33 (ENSDORG00000014182)	Prkaa1 (ENSDORG00000014183)	ENSDORG00000008300	ENSDORG00000008302	C7 (ENSDORG00000008303)
Lagomorpha	ANCESTRAL SPECIES	28	ENSGT00530000063847.b #7	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Rabbit	MODERN SPECIES	2	RAD1 (ENSOCUG00000014474) #8	BRIX1 (ENSOCUG00000014478) #9	DNAJC21 (ENSOCUG00000005257) #10	AGXT2 (ENSOCUG00000005264) #12	PRLR (ENSOCUG00000005274) #13	SPEF2 (ENSOCUG00000006774) #14	IL7R (ENSOCUG00000011402) #15	CAPSL (ENSOCUG00000011410) #16	UGT3A2 (ENSOCUG00000011414)	LMBRD2 (ENSOCUG00000011423) #17	ENSOCUG00000009154 #18	NADK2 (ENSOCUG00000009162) #19	RANBP3L (ENSOCUG00000038387) #20	ENSOCUG00000003073	SLC1A3 (ENSOCUG00000021947) #21	NIPBL (ENSOCUG00000005888) #22	CPLANE1 (ENSOCUG00000025870) #25	NUP155 (ENSOCUG00000000170) #26	WDR70 (ENSOCUG00000006883) #28	ENSOCUG00000000065	ENSOCUG00000038540	GDNF (ENSOCUG00000003033) #29	EGFLAM (ENSOCUG00000003322) #30	ENSOCUG00000034940 #30	LIFR (ENSOCUG00000003333) #31	OSMR (ENSOCUG00000012643) #32	RICTOR (ENSOCUG00000012668) #34	FYB1 (ENSOCUG00000012699) #35	C9 (ENSOCUG00000012708) #37	DAB2 (ENSOCUG00000012721)	PTGER4 (ENSOCUG00000000895)
Pika	MODERN SPECIES	2854																NIPBL (ENSOPRG00000005225) #22
Tree shrew	MODERN SPECIES	3203																NIPBL (ENSTBEG00000004308) #22
Primates	ANCESTRAL SPECIES	8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Haplorrhini	ANCESTRAL SPECIES	4	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Simiiformes	ANCESTRAL SPECIES	6	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00910000147583	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Catarrhini	ANCESTRAL SPECIES	7	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00910000147583	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Cercopithecidae	ANCESTRAL SPECIES	5	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37
Cercopithecinae	ANCESTRAL SPECIES	9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Cercopithecinae_a	ANCESTRAL SPECIES	9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Macaca	ANCESTRAL SPECIES	7	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00940000165039	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Pig-tailed macaque	MODERN SPECIES	504	BRIX1 (ENSMNEG00000039324) #9	DNAJC21 (ENSMNEG00000035975) #10	AGXT2 (ENSMNEG00000032982) #12	PRLR (ENSMNEG00000030216) #13	SPEF2 (ENSMNEG00000032522) #14	IL7R (ENSMNEG00000031607) #15	CAPSL (ENSMNEG00000035600) #16	UGT3A1 (ENSMNEG00000038697)	ENSMNEG00000001785	LMBRD2 (ENSMNEG00000032535) #17	ENSMNEG00000030813	SKP2 (ENSMNEG00000045203) #18	NADK2 (ENSMNEG00000013281) #19	RANBP3L (ENSMNEG00000038063) #20	SLC1A3 (ENSMNEG00000039089) #21	NIPBL (ENSMNEG00000022277) #22	CPLANE1 (ENSMNEG00000029968) #25	ENSMNEG00000042623	NUP155 (ENSMNEG00000039083) #26	WDR70 (ENSMNEG00000029911) #28	ENSMNEG00000045383	GDNF (ENSMNEG00000035033) #29	EGFLAM (ENSMNEG00000032080) #30	ENSMNEG00000024358	LIFR (ENSMNEG00000035771) #31	OSMR (ENSMNEG00000029404) #32	ENSMNEG00000040659	RICTOR (ENSMNEG00000035093) #34	FYB1 (ENSMNEG00000033176) #35	C9 (ENSMNEG00000036689) #37	DAB2 (ENSMNEG00000029168)
Macaca_a	ANCESTRAL SPECIES	8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00940000164709.a.b.b.a.a.b.b.b.b.a.b.b.c.a.b.a	ENSGT01000000216185.c	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Rhesus	MODERN SPECIES	16	RAD1 (ENSMMUG00000045918) #8	BRIX1 (ENSMMUG00000038794) #9	DNAJC21 (ENSMMUG00000000446) #10	ENSMMUG00000057066	AGXT2 (ENSMMUG00000006301) #12	PRLR (ENSMMUG00000006302) #13	SPEF2 (ENSMMUG00000018739) #14	IL7R (ENSMMUG00000001676) #15	CAPSL (ENSMMUG00000001678) #16	UGT3A1 (ENSMMUG00000055113)	LMBRD2 (ENSMMUG00000015223) #17	SKP2 (ENSMMUG00000015225) #18	NADK2 (ENSMMUG00000015226) #19	RANBP3L (ENSMMUG00000059966) #20	SLC1A3 (ENSMMUG00000006202) #21	NIPBL (ENSMMUG00000022154) #22	ENSMMUG00000030178	CPLANE1 (ENSMMUG00000022166) #25	ENSMMUG00000000703	ENSMMUG00000061988	ENSMMUG00000058026	NUP155 (ENSMMUG00000000704) #26	WDR70 (ENSMMUG00000006107) #28	ENSMMUG00000052836	ENSMMUG00000052974	GDNF (ENSMMUG00000018963) #29	EGFLAM (ENSMMUG00000017163) #30	LIFR (ENSMMUG00000007386) #31	ENSMMUG00000051389	OSMR (ENSMMUG00000001609) #32	RICTOR (ENSMMUG00000001611) #34
Crab-eating macaque	MODERN SPECIES	16	BRIX1 (ENSMFAG00000033107) #9	DNAJC21 (ENSMFAG00000001345) #10	AGXT2 (ENSMFAG00000001767) #12	PRLR (ENSMFAG00000039749) #13	ENSMFAG00000058323	SPEF2 (ENSMFAG00000036146) #14	IL7R (ENSMFAG00000040996) #15	CAPSL (ENSMFAG00000002782) #16	ENSMFAG00000034336	LMBRD2 (ENSMFAG00000003540) #17	ENSMFAG00000044438	SKP2 (ENSMFAG00000030476) #18	NADK2 (ENSMFAG00000039756) #19	RANBP3L (ENSMFAG00000014218) #20	SLC1A3 (ENSMFAG00000024693) #21	NIPBL (ENSMFAG00000041940) #22	ENSMFAG00000049453	ENSMFAG00000060328	CPLANE1 (ENSMFAG00000036182) #25	ENSMFAG00000056932	ENSMFAG00000061363	ENSMFAG00000061867	ENSMFAG00000052450	NUP155 (ENSMFAG00000040363) #26	WDR70 (ENSMFAG00000030910) #28	ENSMFAG00000057345	ENSMFAG00000061244	GDNF (ENSMFAG00000047234) #29	EGFLAM (ENSMFAG00000001590) #30	ENSMFAG00000034705	LIFR (ENSMFAG00000036647) #31
Cercopithecinae_b	ANCESTRAL SPECIES	4	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Olive baboon	MODERN SPECIES	15	AMACR (ENSPANG00000008957)	RAI14 (ENSPANG00000012243)	TTC23L (ENSPANG00000010903) #7	RAD1 (ENSPANG00000024799) #8	BRIX1 (ENSPANG00000016504) #9	DNAJC21 (ENSPANG00000002427) #10	SPEF2 (ENSPANG00000013351) #14	IL7R (ENSPANG00000021405) #15	CAPSL (ENSPANG00000011302) #16	UGT3A1 (ENSPANG00000030682)	LMBRD2 (ENSPANG00000008846) #17	SKP2 (ENSPANG00000026073) #18	NADK2 (ENSPANG00000013350) #19	RANBP3L (ENSPANG00000009354) #20	SLC1A3 (ENSPANG00000014048) #21	NIPBL (ENSPANG00000004378) #22	CPLANE1 (ENSPANG00000022779) #25	ENSPANG00000042997	NUP155 (ENSPANG00000004003) #26	WDR70 (ENSPANG00000018958) #28	GDNF (ENSPANG00000010790) #29	EGFLAM (ENSPANG00000010086) #30	LIFR (ENSPANG00000017937) #31	ENSPANG00000040263	OSMR (ENSPANG00000003727) #32	ENSPANG00000003026	RICTOR (ENSPANG00000009353) #34	ENSPANG00000044550	FYB1 (ENSPANG00000019520) #35	C9 (ENSPANG00000006998) #37	DAB2 (ENSPANG00000005734)
Cercopithecinae_d	ANCESTRAL SPECIES	83	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00390000018651 #17	ENSGT00950000182965.a.b.b.a	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT01040000241472	ENSGT00800000124150 #25	ENSGT00940000165039	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00910000147779	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Drill	MODERN SPECIES	1414				SPEF2 (ENSMLEG00000037353) #14	IL7R (ENSMLEG00000034155) #15	CAPSL (ENSMLEG00000030886) #16	UGT3A1 (ENSMLEG00000034718)	UGT3A2 (ENSMLEG00000041808)	ENSMLEG00000019441	LMBRD2 (ENSMLEG00000043988) #17	ENSMLEG00000029047	SKP2 (ENSMLEG00000036215) #18	NADK2 (ENSMLEG00000030455) #19	RANBP3L (ENSMLEG00000024894) #20	SLC1A3 (ENSMLEG00000028629) #21	NIPBL (ENSMLEG00000041956) #22	ENSMLEG00000033949	ENSMLEG00000020591 #25	ENSMLEG00000029850 #25
Sooty mangabey	MODERN SPECIES	618	BRIX1 (ENSCATG00000037721) #9	DNAJC21 (ENSCATG00000029357) #10	AGXT2 (ENSCATG00000039875) #12	PRLR (ENSCATG00000044109) #13	SPEF2 (ENSCATG00000039845) #14	IL7R (ENSCATG00000035894) #15	CAPSL (ENSCATG00000036845) #16	UGT3A2 (ENSCATG00000044360)	ENSCATG00000018498	LMBRD2 (ENSCATG00000031788) #17	ENSCATG00000022161	SKP2 (ENSCATG00000034287) #18	NADK2 (ENSCATG00000030594) #19	RANBP3L (ENSCATG00000036983) #20	SLC1A3 (ENSCATG00000040527) #21	NIPBL (ENSCATG00000038296) #22	CPLANE1 (ENSCATG00000036842) #25	ENSCATG00000039550	ENSCATG00000039836	NUP155 (ENSCATG00000022656) #26	WDR70 (ENSCATG00000032326) #28	ENSCATG00000029476	GDNF (ENSCATG00000039360) #29	EGFLAM (ENSCATG00000031363) #30	ENSCATG00000019362	LIFR (ENSCATG00000037247) #31	ENSCATG00000040214	OSMR (ENSCATG00000040888) #32	ENSCATG00000037542	RICTOR (ENSCATG00000043229) #34	FYB1 (ENSCATG00000036267) #35
Vervet Monkey	MODERN SPECIES	23	RAD1 (ENSCSAG00000017124) #8	BRIX1 (ENSCSAG00000017117) #9	DNAJC21 (ENSCSAG00000017112) #10	AGXT2 (ENSCSAG00000017109) #12	PRLR (ENSCSAG00000017107) #13	SPEF2 (ENSCSAG00000017093) #14	IL7R (ENSCSAG00000017048) #15	CAPSL (ENSCSAG00000017045) #16	UGT3A1 (ENSCSAG00000017042)	UGT3A2 (ENSCSAG00000017039)	LMBRD2 (ENSCSAG00000017036) #17	SKP2 (ENSCSAG00000017028) #18	NADK2 (ENSCSAG00000017026) #19	RANBP3L (ENSCSAG00000017022) #20	SLC1A3 (ENSCSAG00000017016) #21	NIPBL (ENSCSAG00000017012) #22	CPLANE1 (ENSCSAG00000017005) #25	ENSCSAG00000018995	NUP155 (ENSCSAG00000016999) #26	WDR70 (ENSCSAG00000016994) #28	GDNF (ENSCSAG00000016991) #29	EGFLAM (ENSCSAG00000016988) #30	LIFR (ENSCSAG00000016984) #31	OSMR (ENSCSAG00000016980) #32	RICTOR (ENSCSAG00000016972) #34	ENSCSAG00000016963	ENSCSAG00000018996	FYB1 (ENSCSAG00000016953) #35	C9 (ENSCSAG00000016939) #37	DAB2 (ENSCSAG00000016933)	ENSCSAG00000018997
Rhinopithecus	ANCESTRAL SPECIES	678															ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00800000124150 #25	ENSGT00390000001798.d
Golden snub-nosed monkey	MODERN SPECIES	675															SLC1A3 (ENSRROG00000037610) #21	NIPBL (ENSRROG00000027875) #22	ENSRROG00000012772	CPLANE1 (ENSRROG00000044447) #25	ENSRROG00000039919
Black snub-nosed monkey	MODERN SPECIES	264															SLC1A3 (ENSRBIG00000041759) #21	NIPBL (ENSRBIG00000044409) #22	ENSRBIG00000042540	ENSRBIG00000037643	CPLANE1 (ENSRBIG00000028763) #25
Hominoidea	ANCESTRAL SPECIES	8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00940000154314.k.a.b	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567
Hominidae	ANCESTRAL SPECIES	7	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00800000124150 #25	ENSGT00390000001798.d	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT00390000016655.a.a.b.f
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	7	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00940000165039	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT00390000016655.a.a.b.f
Homo/Pan group	ANCESTRAL SPECIES	8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00940000165039	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT00390000016655.a.a.b.f
Pan	ANCESTRAL SPECIES	21	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000163740.c	ENSGT00940000161263	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00390000005569.x.a.a.a.a.a.b.a.a	ENSGT00940000165039	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00620000089245	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT00390000016655.a.a.b.f
Bonobo	MODERN SPECIES	18	DNAJC21 (ENSPPAG00000042627) #10	AGXT2 (ENSPPAG00000035314) #12	PRLR (ENSPPAG00000043899) #13	ENSPPAG00000037233 #14	IL7R (ENSPPAG00000039723) #15	CAPSL (ENSPPAG00000019420) #16	ENSPPAG00000004829	ENSPPAG00000040298	ENSPPAG00000039004	ENSPPAG00000031288	LMBRD2 (ENSPPAG00000029193) #17	SKP2 (ENSPPAG00000026467) #18	ENSPPAG00000036531 #19	RANBP3L (ENSPPAG00000031849) #20	SLC1A3 (ENSPPAG00000032856) #21	NIPBL (ENSPPAG00000038200) #22	ENSPPAG00000039740	ENSPPAG00000032480	CPLANE1 (ENSPPAG00000036782) #25	NUP155 (ENSPPAG00000043867) #26	ENSPPAG00000000687 #28	ENSPPAG00000030132	ENSPPAG00000036064 #28	GDNF (ENSPPAG00000012574) #29	EGFLAM (ENSPPAG00000034407) #30	LIFR (ENSPPAG00000040148) #31	OSMR (ENSPPAG00000033213) #32	RICTOR (ENSPPAG00000039635) #34	ENSPPAG00000024305	ENSPPAG00000039798 #35	C9 (ENSPPAG00000037150) #37
Chimpanzee	MODERN SPECIES	18	RAD1 (ENSPTRG00000016783) #8	BRIX1 (ENSPTRG00000016784) #9	DNAJC21 (ENSPTRG00000016785) #10	AGXT2 (ENSPTRG00000016786) #12	PRLR (ENSPTRG00000016787) #13	SPEF2 (ENSPTRG00000016788) #14	IL7R (ENSPTRG00000016790) #15	CAPSL (ENSPTRG00000016791) #16	UGT3A1 (ENSPTRG00000016792)	UGT3A2 (ENSPTRG00000051465)	LMBRD2 (ENSPTRG00000016794) #17	SKP2 (ENSPTRG00000016797) #18	NADK2 (ENSPTRG00000016798) #19	RANBP3L (ENSPTRG00000016799) #20	SLC1A3 (ENSPTRG00000016800) #21	NIPBL (ENSPTRG00000016801) #22	ENSPTRG00000045502	CPLANE1 (ENSPTRG00000023298) #25	NUP155 (ENSPTRG00000016804) #26	ENSPTRG00000049546	WDR70 (ENSPTRG00000016806) #28	GDNF (ENSPTRG00000016807) #29	EGFLAM (ENSPTRG00000016808) #30	LIFR (ENSPTRG00000016809) #31	OSMR (ENSPTRG00000016810) #32	RICTOR (ENSPTRG00000016811) #34	ENSPTRG00000042831	FYB1 (ENSPTRG00000045930) #35	C9 (ENSPTRG00000016816) #37	DAB2 (ENSPTRG00000016817)	ENSPTRG00000052510
Human	MODERN SPECIES	17	RAD1 (ENSG00000113456) #8	BRIX1 (ENSG00000113460) #9	DNAJC21 (ENSG00000168724) #10	AGXT2 (ENSG00000113492) #12	PRLR (ENSG00000113494) #13	SPEF2 (ENSG00000152582) #14	IL7R (ENSG00000168685) #15	CAPSL (ENSG00000152611) #16	UGT3A1 (ENSG00000145626)	UGT3A2 (ENSG00000168671)	LMBRD2 (ENSG00000164187) #17	SKP2 (ENSG00000145604) #18	NADK2 (ENSG00000152620) #19	RANBP3L (ENSG00000164188) #20	SLC1A3 (ENSG00000079215) #21	NIPBL (ENSG00000164190) #22	CPLANE1 (ENSG00000197603) #25	NUP155 (ENSG00000113569) #26	WDR70 (ENSG00000082068) #28	GDNF (ENSG00000168621) #29	EGFLAM (ENSG00000164318) #30	LIFR (ENSG00000113594) #31	OSMR (ENSG00000145623) #32	RICTOR (ENSG00000164327) #34	FYB1 (ENSG00000082074) #35	C9 (ENSG00000113600) #37	DAB2 (ENSG00000153071)	TTC33 (ENSG00000113638)	PTGER4 (ENSG00000171522)	PRKAA1 (ENSG00000132356)	RPL37 (ENSG00000145592)
Gorilla	MODERN SPECIES	8	RAD1 (ENSGGOG00000004219) #8	BRIX1 (ENSGGOG00000004225) #9	DNAJC21 (ENSGGOG00000024744) #10	AGXT2 (ENSGGOG00000006579) #12	PRLR (ENSGGOG00000043123) #13	ENSGGOG00000011332 #14	IL7R (ENSGGOG00000014862) #15	CAPSL (ENSGGOG00000022838) #16	UGT3A1 (ENSGGOG00000008662)	UGT3A2 (ENSGGOG00000003108)	LMBRD2 (ENSGGOG00000023658) #17	SKP2 (ENSGGOG00000015620) #18	NADK2 (ENSGGOG00000015623) #19	RANBP3L (ENSGGOG00000010607) #20	SLC1A3 (ENSGGOG00000004661) #21	NIPBL (ENSGGOG00000026268) #22	ENSGGOG00000038240	ENSGGOG00000041963	CPLANE1 (ENSGGOG00000015352) #25	NUP155 (ENSGGOG00000013905) #26	WDR70 (ENSGGOG00000034954) #28	GDNF (ENSGGOG00000039274) #29	EGFLAM (ENSGGOG00000005053) #30	LIFR (ENSGGOG00000015008) #31	OSMR (ENSGGOG00000014580) #32	RICTOR (ENSGGOG00000014599) #34	ENSGGOG00000025102	FYB1 (ENSGGOG00000001364) #35	C9 (ENSGGOG00000015918) #37	DAB2 (ENSGGOG00000005856)	ENSGGOG00000040103
Orangutan	MODERN SPECIES	18	BRIX1 (ENSPPYG00000015390) #9	ENSPPYG00000015391 #10	AGXT2 (ENSPPYG00000015392) #12	PRLR (ENSPPYG00000015393) #13	SPEF2 (ENSPPYG00000015395) #14	IL7R (ENSPPYG00000015396) #15	CAPSL (ENSPPYG00000015397) #16	UGT3A1 (ENSPPYG00000015398)	ENSPPYG00000034817	ENSPPYG00000038428	LMBRD2 (ENSPPYG00000015399) #17	SKP2 (ENSPPYG00000015400) #18	NADK2 (ENSPPYG00000015401) #19	RANBP3L (ENSPPYG00000036945) #20	SLC1A3 (ENSPPYG00000015403) #21	NIPBL (ENSPPYG00000015404) #22	CPLANE1 (ENSPPYG00000015405) #25	ENSPPYG00000015406	NUP155 (ENSPPYG00000015407) #26	WDR70 (ENSPPYG00000015408) #28	ENSPPYG00000034921	GDNF (ENSPPYG00000034776) #29	EGFLAM (ENSPPYG00000015410) #30	LIFR (ENSPPYG00000015411) #31	OSMR (ENSPPYG00000015413) #32	RICTOR (ENSPPYG00000015414) #34	ENSPPYG00000031776	FYB1 (ENSPPYG00000015415) #35	C9 (ENSPPYG00000015416) #37	DAB2 (ENSPPYG00000015417)	TTC33 (ENSPPYG00000015420)
Gibbon	MODERN SPECIES	21	TTC23L (ENSNLEG00000014433) #7	RAD1 (ENSNLEG00000014437) #8	BRIX1 (ENSNLEG00000032149) #9	DNAJC21 (ENSNLEG00000014463) #10	ENSNLEG00000014471 #12	PRLR (ENSNLEG00000032379) #13	ENSNLEG00000015937 #14	IL7R (ENSNLEG00000015949) #15	CAPSL (ENSNLEG00000015973) #16	UGT3A2 (ENSNLEG00000015982)	LMBRD2 (ENSNLEG00000015983) #17	SKP2 (ENSNLEG00000016025) #18	NADK2 (ENSNLEG00000016064) #19	RANBP3L (ENSNLEG00000016078) #20	SLC1A3 (ENSNLEG00000016107) #21	NIPBL (ENSNLEG00000016123) #22	ENSNLEG00000032397	CPLANE1 (ENSNLEG00000016160) #25	ENSNLEG00000016210	NUP155 (ENSNLEG00000016211) #26	ENSNLEG00000035003	WDR70 (ENSNLEG00000016270) #28	ENSNLEG00000032684	ENSNLEG00000016286 #29	EGFLAM (ENSNLEG00000016287) #30	LIFR (ENSNLEG00000028672) #31	OSMR (ENSNLEG00000016342) #32	RICTOR (ENSNLEG00000016355) #34	FYB1 (ENSNLEG00000032915) #35	C9 (ENSNLEG00000016425) #37	DAB2 (ENSNLEG00000016439)
Platyrrhini	ANCESTRAL SPECIES	7	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00390000007918.s.a #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462.o	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Cebidae	ANCESTRAL SPECIES	6	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00390000007918.s.a #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462.o	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Marmoset	MODERN SPECIES	11	AGXT2 (ENSCJAG00000018485) #12	PRLR (ENSCJAG00000018457) #13	ENSCJAG00000075083	SPEF2 (ENSCJAG00000018398) #14	IL7R (ENSCJAG00000018379) #15	CAPSL (ENSCJAG00000018371) #16	ENSCJAG00000065949	UGT3A1 (ENSCJAG00000018354)	LMBRD2 (ENSCJAG00000018328) #17	SKP2 (ENSCJAG00000018275) #18	NADK2 (ENSCJAG00000018248) #19	RANBP3L (ENSCJAG00000018235) #20	ENSCJAG00000069947	ENSCJAG00000082486	SLC1A3 (ENSCJAG00000018196) #21	NIPBL (ENSCJAG00000018052) #22	CPLANE1 (ENSCJAG00000018003) #25	ENSCJAG00000078551	ENSCJAG00000085546	NUP155 (ENSCJAG00000017976) #26	ENSCJAG00000070684	WDR70 (ENSCJAG00000007784) #28	GDNF (ENSCJAG00000007761) #29	EGFLAM (ENSCJAG00000007668) #30	LIFR (ENSCJAG00000007608) #31	ENSCJAG00000074673	ENSCJAG00000078983	OSMR (ENSCJAG00000007577) #32	RICTOR (ENSCJAG00000007501) #34	FYB1 (ENSCJAG00000007485) #35	C9 (ENSCJAG00000007477) #37
Cebidae_a	ANCESTRAL SPECIES	3	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000163740.d	ENSGT00940000161263	ENSGT00910000147583	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00390000007918.s.a #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462.o	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Bolivian squirrel monkey	MODERN SPECIES	57	PRLR (ENSSBOG00000025238) #13	ENSSBOG00000020338	ENSSBOG00000021503	SPEF2 (ENSSBOG00000028933) #14	IL7R (ENSSBOG00000031974) #15	CAPSL (ENSSBOG00000023443) #16	UGT3A1 (ENSSBOG00000028464)	UGT3A2 (ENSSBOG00000021569)	ENSSBOG00000011356	LMBRD2 (ENSSBOG00000027034) #17	ENSSBOG00000019827 #18	NADK2 (ENSSBOG00000025237) #19	RANBP3L (ENSSBOG00000027413) #20	ENSSBOG00000025695	SLC1A3 (ENSSBOG00000022569) #21	NIPBL (ENSSBOG00000021705) #22	CPLANE1 (ENSSBOG00000035658) #25	ENSSBOG00000034912	NUP155 (ENSSBOG00000019052) #26	ENSSBOG00000019791	ENSSBOG00000034407	WDR70 (ENSSBOG00000026848) #28	GDNF (ENSSBOG00000024539) #29	EGFLAM (ENSSBOG00000024254) #30	LIFR (ENSSBOG00000032569) #31	OSMR (ENSSBOG00000018501) #32	RICTOR (ENSSBOG00000033799) #34	FYB1 (ENSSBOG00000036067) #35	C9 (ENSSBOG00000027417) #37	DAB2 (ENSSBOG00000035362)	ENSSBOG00000032629
Capuchin	MODERN SPECIES	205	BRIX1 (ENSCCAG00000033405) #9	DNAJC21 (ENSCCAG00000038110) #10	AGXT2 (ENSCCAG00000022707) #12	PRLR (ENSCCAG00000029726) #13	ENSCCAG00000031804	SPEF2 (ENSCCAG00000031269) #14	IL7R (ENSCCAG00000031319) #15	CAPSL (ENSCCAG00000036140) #16	UGT3A1 (ENSCCAG00000026886)	ENSCCAG00000024654	LMBRD2 (ENSCCAG00000021003) #17	ENSCCAG00000029445 #18	NADK2 (ENSCCAG00000033594) #19	RANBP3L (ENSCCAG00000021294) #20	SLC1A3 (ENSCCAG00000036245) #21	NIPBL (ENSCCAG00000036588) #22	CPLANE1 (ENSCCAG00000035993) #25	NUP155 (ENSCCAG00000032379) #26	ENSCCAG00000032930	WDR70 (ENSCCAG00000036278) #28	GDNF (ENSCCAG00000020812) #29
Mas night monkey	MODERN SPECIES	576	DNAJC21 (ENSANAG00000029512) #10	AGXT2 (ENSANAG00000036773) #12	PRLR (ENSANAG00000037843) #13	SPEF2 (ENSANAG00000019062) #14	IL7R (ENSANAG00000035265) #15	CAPSL (ENSANAG00000024812) #16	UGT3A1 (ENSANAG00000031527)	ENSANAG00000027830	LMBRD2 (ENSANAG00000033559) #17	ENSANAG00000023606 #18	NADK2 (ENSANAG00000025565) #19	RANBP3L (ENSANAG00000031353) #20	ENSANAG00000030132	ENSANAG00000032983	SLC1A3 (ENSANAG00000022305) #21	NIPBL (ENSANAG00000023189) #22	ENSANAG00000017913	CPLANE1 (ENSANAG00000026997) #25	ENSANAG00000024251	NUP155 (ENSANAG00000022258) #26	ENSANAG00000024058	WDR70 (ENSANAG00000027079) #28	GDNF (ENSANAG00000027668) #29	EGFLAM (ENSANAG00000036951) #30	LIFR (ENSANAG00000007846) #31	OSMR (ENSANAG00000036639) #32	RICTOR (ENSANAG00000035097) #34	FYB1 (ENSANAG00000020505) #35	C9 (ENSANAG00000036485) #37	DAB2 (ENSANAG00000038111)	ENSANAG00000022538
Tarsier	MODERN SPECIES	3855																NIPBL (ENSTSYG00000013472) #22	CPLANE1 (ENSTSYG00000001585) #25
Strepsirrhini	ANCESTRAL SPECIES	5	ENSGT00500000044913 #8	ENSGT00390000014467 #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00940000163740.c	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Lemuriformes	ANCESTRAL SPECIES	47	ENSGT00500000044913.c #8	ENSGT00390000014467.m #9	ENSGT00510000047097 #10	ENSGT00940000156125 #12	ENSGT00940000154851.B #13	ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00940000163740.c.c	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Mouse lemur	MODERN SPECIES	3	RAD1 (ENSMICG00000005664) #8	BRIX1 (ENSMICG00000005672) #9	DNAJC21 (ENSMICG00000005679) #10	AGXT2 (ENSMICG00000005689) #12	PRLR (ENSMICG00000005697) #13	SPEF2 (ENSMICG00000001636) #14	IL7R (ENSMICG00000001648) #15	CAPSL (ENSMICG00000042256) #16	ENSMICG00000026841	ENSMICG00000017827	LMBRD2 (ENSMICG00000017828) #17	SKP2 (ENSMICG00000017829) #18	NADK2 (ENSMICG00000031635) #19	RANBP3L (ENSMICG00000017831) #20	SLC1A3 (ENSMICG00000012786) #21	NIPBL (ENSMICG00000012468) #22	CPLANE1 (ENSMICG00000012526) #25	NUP155 (ENSMICG00000017202) #26	WDR70 (ENSMICG00000027615) #28	GDNF (ENSMICG00000038777) #29	EGFLAM (ENSMICG00000017230) #30	LIFR (ENSMICG00000017232) #31	OSMR (ENSMICG00000006658) #32	RICTOR (ENSMICG00000006675) #34	FYB1 (ENSMICG00000030963) #35	C9 (ENSMICG00000006710) #37	ENSMICG00000026620	DAB2 (ENSMICG00000006730)	ENSMICG00000047886	PTGER4 (ENSMICG00000027186)	PRKAA1 (ENSMICG00000036665)
Lemuriformes_a	ANCESTRAL SPECIES	131						ENSGT00390000008160 #14	ENSGT00510000048500 #15	ENSGT00940000156466 #16	ENSGT00940000161263	ENSGT00940000163740.c.c	ENSGT00390000018651 #17	ENSGT00390000007918 #18	ENSGT00390000006320 #19	ENSGT00940000161387 #20	ENSGT00940000155464 #21	ENSGT00390000010427.c #22	ENSGT00800000124150 #25	ENSGT00390000016532 #26	ENSGT00390000015433 #28	ENSGT00950000182993.A.b #29	ENSGT00940000158504 #30	ENSGT00940000155776 #31	ENSGT00940000160851 #32	ENSGT00390000002096 #34	ENSGT00530000063460.A.b #35	ENSGT00940000159777 #37	ENSGT00940000155567	ENSGT01050000244902.a.a.a.a	ENSGT00390000017462	ENSGT00940000158865	ENSGT00390000005254.i.a.a.a.a
Greater bamboo lemur	MODERN SPECIES	547									ENSPSMG00000004355	ENSPSMG00000004345	LMBRD2 (ENSPSMG00000004334) #17	SKP2 (ENSPSMG00000004287) #18	NADK2 (ENSPSMG00000004172) #19	RANBP3L (ENSPSMG00000004080) #20	SLC1A3 (ENSPSMG00000003924) #21	NIPBL (ENSPSMG00000003534) #22	CPLANE1 (ENSPSMG00000003356) #25	NUP155 (ENSPSMG00000003091) #26	WDR70 (ENSPSMG00000002916) #28	GDNF (ENSPSMG00000002888) #29	ENSPSMG00000002879	EGFLAM (ENSPSMG00000002763) #30	LIFR (ENSPSMG00000002683) #31	ENSPSMG00000002662 #32	RICTOR (ENSPSMG00000002540) #34	FYB1 (ENSPSMG00000002386) #35	C9 (ENSPSMG00000002380) #37	DAB2 (ENSPSMG00000002035)
Coquerels sifaka	MODERN SPECIES	88							IL7R (ENSPCOG00000002642) #15	CAPSL (ENSPCOG00000015639) #16	ENSPCOG00000015550	ENSPCOG00000026238	LMBRD2 (ENSPCOG00000015557) #17	SKP2 (ENSPCOG00000025797) #18	NADK2 (ENSPCOG00000020255) #19	RANBP3L (ENSPCOG00000018367) #20	SLC1A3 (ENSPCOG00000003394) #21	NIPBL (ENSPCOG00000021900) #22	CPLANE1 (ENSPCOG00000021498) #25	NUP155 (ENSPCOG00000013228) #26	WDR70 (ENSPCOG00000022281) #28	GDNF (ENSPCOG00000022994) #29	EGFLAM (ENSPCOG00000018965) #30	LIFR (ENSPCOG00000023656) #31	ENSPCOG00000010776 #32	RICTOR (ENSPCOG00000027952) #34	FYB1 (ENSPCOG00000026925) #35	ENSPCOG00000004423 #37	DAB2 (ENSPCOG00000022554)	PTGER4 (ENSPCOG00000022906)	TTC33 (ENSPCOG00000024676)	PRKAA1 (ENSPCOG00000023955)	RPL37 (ENSPCOG00000025802)
Bushbaby	MODERN SPECIES	178	RAI14 (ENSOGAG00000014808)	TTC23L (ENSOGAG00000014818) #7	RAD1 (ENSOGAG00000014822) #8	BRIX1 (ENSOGAG00000014827) #9	DNAJC21 (ENSOGAG00000001468) #10	AGXT2 (ENSOGAG00000001469) #12	PRLR (ENSOGAG00000001473) #13	SPEF2 (ENSOGAG00000014357) #14	CAPSL (ENSOGAG00000025579) #16	UGT3A2 (ENSOGAG00000007228)	LMBRD2 (ENSOGAG00000007231) #17	ENSOGAG00000007236 #18	NADK2 (ENSOGAG00000007242) #19	RANBP3L (ENSOGAG00000007246) #20	SLC1A3 (ENSOGAG00000004888) #21	NIPBL (ENSOGAG00000006135) #22	ENSOGAG00000012406 #25	NUP155 (ENSOGAG00000012413) #26	WDR70 (ENSOGAG00000006649) #28	GDNF (ENSOGAG00000001397) #29	EGFLAM (ENSOGAG00000002067) #30	LIFR (ENSOGAG00000002071) #31	OSMR (ENSOGAG00000006678) #32	RICTOR (ENSOGAG00000024700) #34	FYB1 (ENSOGAG00000009935) #35	C9 (ENSOGAG00000012072) #37	DAB2 (ENSOGAG00000015730)	ENSOGAG00000029379	PTGER4 (ENSOGAG00000024975)	TTC33 (ENSOGAG00000011946)	PRKAA1 (ENSOGAG00000011950)