Amniota DUPLICATION Amniota DUPLICATION Amniota ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Mammalia ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Theria ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Eutheria ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Boreoeutheria ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Euarchontoglires ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Primates ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Haplorrhini ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Tarsier DUPLICATION Tarsier MODERN SPECIES 7007 ENSTSYG00000027124 #19 HSD17B6 (ENSTSYG00000013583) #20 PRIM1 (ENSTSYG00000006664) #21 NACA (ENSTSYG00000036184) #22 PTGES3 (ENSTSYG00000009622) #23 ATP5B (ENSTSYG00000009962) #24 BAZ2A (ENSTSYG00000008784) #25 ENSTSYG00000030853 #26 RBMS2 (ENSTSYG00000001167) #27 GLS2 (ENSTSYG00000007581) #28 SPRYD4 (ENSTSYG00000035448) #29 MIP (ENSTSYG00000030357) #30 Tarsier MODERN SPECIES 5956 ENSTSYG00000030604 ##22 PARP8 (ENSTSYG00000003929) Tarsier MODERN SPECIES 5489 DGKQ (ENSTSYG00000002505) TMEM175 (ENSTSYG00000035482) GAK (ENSTSYG00000036328) CPLX1 (ENSTSYG00000032505) ENSTSYG00000035619 ##22 PCGF3 (ENSTSYG00000031809) SLC49A3 (ENSTSYG00000001586) MYL5 (ENSTSYG00000001583) ATP5I (ENSTSYG00000028770) PDE6B (ENSTSYG00000010537) Simiiformes ANCESTRAL SPECIES 17 ENSGT00940000154525.b.a ENSGT00940000162108.tb ENSGT00390000005511 ENSGT00390000012112 ENSGT00950000183145.E ENSGT00940000156955 ENSGT00650000095054 ENSGT00940000155157 ENSGT00940000161718 ENSGT00940000157052 ENSGT00390000011476 ENSGT00500000044926.b ENSGT00940000155447 ENSGT00390000004068 ENSGT00940000158288 ENSGT00440000033468.c.b #22 ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000154259.k.a ENSGT00940000159204 ENSGT00500000044913.b ENSGT00940000160482 ENSGT00940000161426 ENSGT00910000148293 ENSGT00940000160702.b ENSGT00940000153430.a.b.r ENSGT01030000234641.a.b ENSGT00390000014431 ENSGT00730000111063 ENSGT00950000183135.B.b Catarrhini ANCESTRAL SPECIES 18 ENSGT00940000154525.b.a ENSGT00940000162108.tb ENSGT00390000005511 ENSGT00390000012112 ENSGT00950000183145.E ENSGT00940000156955 ENSGT00650000095054 ENSGT00940000155157 ENSGT00940000161718 ENSGT00940000157052 ENSGT00390000011476 ENSGT00500000044926.b ENSGT00940000155447 ENSGT00390000004068 ENSGT00940000158288 ENSGT00440000033468.c.b #22 ENSGT00940000156602 ENSGT00390000017265 ENSGT00940000155996 ENSGT00940000154259.k.a ENSGT00940000159204 ENSGT00500000044913.b ENSGT00940000160482 ENSGT00910000147084 ENSGT00940000161426 ENSGT00910000148293 ENSGT00940000160702.b ENSGT00940000153430.a.b.r ENSGT01030000234641.a.b ENSGT00390000014431 ENSGT00730000111063 Cercopithecidae ANCESTRAL SPECIES 14 ENSGT00940000163468 ENSGT00940000160530 ENSGT00940000158854 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 ENSGT00390000005711.l Cercopithecinae ANCESTRAL SPECIES 16 ENSGT00940000163468 ENSGT00940000160530 ENSGT00940000158854 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 ENSGT00390000005711.l Cercopithecinae_a ANCESTRAL SPECIES 15 ENSGT00940000160530 ENSGT00940000158854 ENSGT00940000154684 ENSGT00940000162275 ENSGT00390000011196.f ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00910000148873 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 Macaca ANCESTRAL SPECIES 14 ENSGT00940000158854 ENSGT00940000154684 ENSGT00940000162275 ENSGT00390000011196.f ENSGT00500000044936 ENSGT00530000063692.a ENSGT00940000164643 ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00940000158862 ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT00390000013853 ENSGT00910000148873 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 ENSGT00390000005711.l.a.a ENSGT00940000155236 Pig-tailed macaque MODERN SPECIES 535 ENSMNEG00000036946 OSR2 (ENSMNEG00000028787) ENSMNEG00000034864 VPS13B (ENSMNEG00000029094) COX6C (ENSMNEG00000030335) RGS22 (ENSMNEG00000043087) FBXO43 (ENSMNEG00000036160) ENSMNEG00000042506 SPAG1 (ENSMNEG00000028691) RNF19A (ENSMNEG00000030685) ANKRD46 (ENSMNEG00000032302) SNX31 (ENSMNEG00000041333) PABPC1 (ENSMNEG00000009340) ENSMNEG00000041365 ZNF706 (ENSMNEG00000029722) ENSMNEG00000034441 #22 GRHL2 (ENSMNEG00000038814) NCALD (ENSMNEG00000029033) ENSMNEG00000039535 UBR5 (ENSMNEG00000028834) ODF1 (ENSMNEG00000040981) KLF10 (ENSMNEG00000032838) AZIN1 (ENSMNEG00000019639) ATP6V1C1 (ENSMNEG00000043769) ENSMNEG00000045049 ENSMNEG00000001326 FZD6 (ENSMNEG00000042736) CTHRC1 (ENSMNEG00000038540) SLC25A32 (ENSMNEG00000039981) ENSMNEG00000033963 RIMS2 (ENSMNEG00000030361) Cercopithecinae_b ANCESTRAL SPECIES 9 ENSGT00940000154684 ENSGT00940000162275 ENSGT00390000011196.f ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.b.t.a ENSGT00940000153773.a.b.a.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00910000148873 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 Olive baboon MODERN SPECIES 19 INHBC (ENSPANG00000012538) R3HDM2 (ENSPANG00000024002) STAC3 (ENSPANG00000002380) NDUFA4L2 (ENSPANG00000004071) SHMT2 (ENSPANG00000009141) NXPH4 (ENSPANG00000042378) ENSPANG00000013191 ENSPANG00000048911 STAT6 (ENSPANG00000024919) NAB2 (ENSPANG00000004072) NEMP1 (ENSPANG00000022961) MYO1A (ENSPANG00000004850) TAC3 (ENSPANG00000026356) ZBTB39 (ENSPANG00000012176) GPR182 (ENSPANG00000003193) ENSPANG00000009561 #22 ENSPANG00000029684 #23 ATP5F1B (ENSPANG00000024003) #24 BAZ2A (ENSPANG00000021120) #25 RBMS2 (ENSPANG00000014113) #27 ENSPANG00000043550 GLS2 (ENSPANG00000017045) #28 SPRYD4 (ENSPANG00000010685) #29 MIP (ENSPANG00000011371) #30 TIMELESS (ENSPANG00000004690) ENSPANG00000047501 APOF (ENSPANG00000014071) STAT2 (ENSPANG00000012539) IL23A (ENSPANG00000012662) PAN2 (ENSPANG00000018906) CNPY2 (ENSPANG00000019456) Cercopithecinae_d ANCESTRAL SPECIES 92 ENSGT00940000154684 ENSGT00940000162275 ENSGT00390000011196.f ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.b.t.a ENSGT00940000153773.a.b.a.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00910000148873 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 Drill MODERN SPECIES 872 ENSMLEG00000027792 ENSMLEG00000033187 ZNF706 (ENSMLEG00000037610) ENSMLEG00000038288 #22 GRHL2 (ENSMLEG00000007196) NCALD (ENSMLEG00000030016) ENSMLEG00000040262 RRM2B (ENSMLEG00000028350) UBR5 (ENSMLEG00000039922) ODF1 (ENSMLEG00000033052) KLF10 (ENSMLEG00000034886) AZIN1 (ENSMLEG00000008532) ATP6V1C1 (ENSMLEG00000028654) ENSMLEG00000044296 BAALC (ENSMLEG00000034503) ENSMLEG00000027301 FZD6 (ENSMLEG00000028707) CTHRC1 (ENSMLEG00000029976) SLC25A32 (ENSMLEG00000042902) Sooty mangabey DUPLICATION Sooty mangabey MODERN SPECIES 658 STK3 (ENSCATG00000026061) ENSCATG00000001750 ##26 OSR2 (ENSCATG00000044939) VPS13B (ENSCATG00000035674) COX6C (ENSCATG00000041529) RGS22 (ENSCATG00000037557) FBXO43 (ENSCATG00000040501) POLR2K (ENSCATG00000007143) SPAG1 (ENSCATG00000037794) RNF19A (ENSCATG00000037706) ANKRD46 (ENSCATG00000035515) SNX31 (ENSCATG00000035665) PABPC1 (ENSCATG00000039184) ENSCATG00000024186 ZNF706 (ENSCATG00000031731) ENSCATG00000032859 #22 GRHL2 (ENSCATG00000023707) NCALD (ENSCATG00000043115) RRM2B (ENSCATG00000026045) UBR5 (ENSCATG00000035969) ODF1 (ENSCATG00000040837) KLF10 (ENSCATG00000042287) AZIN1 (ENSCATG00000039600) ATP6V1C1 (ENSCATG00000041797) BAALC (ENSCATG00000040039) FZD6 (ENSCATG00000031457) CTHRC1 (ENSCATG00000035908) SLC25A32 (ENSCATG00000033455) DCAF13 (ENSCATG00000032160) Sooty mangabey MODERN SPECIES 527 FAM24A (ENSCATG00000037982) FAM24B (ENSCATG00000043992) ENSCATG00000036116 C10orf120 (ENSCATG00000033658) DMBT1 (ENSCATG00000044187) HTRA1 (ENSCATG00000038268) ARMS2 (ENSCATG00000026311) PLEKHA1 (ENSCATG00000005094) BTBD16 (ENSCATG00000012464) TACC2 (ENSCATG00000000364) NSMCE4A (ENSCATG00000037970) ATE1 (ENSCATG00000039070) FGFR2 (ENSCATG00000037271) WDR11 (ENSCATG00000043471) PLPP4 (ENSCATG00000008532) ENSCATG00000039059 #22 SEC23IP (ENSCATG00000031879) MCMBP (ENSCATG00000035237) INPP5F (ENSCATG00000016832) ENSCATG00000036096 BAG3 (ENSCATG00000043521) ENSCATG00000042161 TIAL1 (ENSCATG00000043838) RGS10 (ENSCATG00000032717) GRK5 (ENSCATG00000025277) PRDX3 (ENSCATG00000041288) SFXN4 (ENSCATG00000038203) DENND10 (ENSCATG00000044731) EIF3A (ENSCATG00000037599) NANOS1 (ENSCATG00000000994) CACUL1 (ENSCATG00000021798) Rhinopithecus ANCESTRAL SPECIES 71 ENSGT00940000154984.C ENSGT00940000163468 ENSGT00940000160530 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.a.b ENSGT01090000260040.a.a.b.u ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00390000002944.f ENSGT00940000155788 ENSGT00940000158862 ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 ENSGT00390000005711.l ENSGT00940000155236 Black snub-nosed monkey MODERN SPECIES 2000 FBXO43 (ENSRBIG00000032986) ENSRBIG00000035082 SPAG1 (ENSRBIG00000033092) RNF19A (ENSRBIG00000042666) ANKRD46 (ENSRBIG00000043708) SNX31 (ENSRBIG00000037977) ENSRBIG00000029759 ENSRBIG00000035734 ZNF706 (ENSRBIG00000017868) ENSRBIG00000033733 #22 ENSRBIG00000040580 GRHL2 (ENSRBIG00000023592) NCALD (ENSRBIG00000044706) RRM2B (ENSRBIG00000032299) ENSRBIG00000002104 UBR5 (ENSRBIG00000038821) ENSRBIG00000023693 ODF1 (ENSRBIG00000044212) KLF10 (ENSRBIG00000040429) AZIN1 (ENSRBIG00000035031) ATP6V1C1 (ENSRBIG00000033994) BAALC (ENSRBIG00000036629) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 2036 SDR9C7 (ENSRROG00000033292) ENSRROG00000032901 HSD17B6 (ENSRROG00000038505) #20 PRIM1 (ENSRROG00000043202) #21 ENSRROG00000039064 #22 ENSRROG00000042343 ENSRROG00000033807 #23 ATP5F1B (ENSRROG00000036322) #24 BAZ2A (ENSRROG00000041655) #25 RBMS2 (ENSRROG00000044831) #27 ENSRROG00000032292 GLS2 (ENSRROG00000034902) #28 SPRYD4 (ENSRROG00000044380) #29 MIP (ENSRROG00000038909) #30 TIMELESS (ENSRROG00000029339) APOF (ENSRROG00000039109) STAT2 (ENSRROG00000031109) IL23A (ENSRROG00000045544) PAN2 (ENSRROG00000041950) CNPY2 (ENSRROG00000045089) Golden snub-nosed monkey MODERN SPECIES 1779 RGS22 (ENSRROG00000037971) FBXO43 (ENSRROG00000043955) ENSRROG00000043844 SPAG1 (ENSRROG00000040225) RNF19A (ENSRROG00000034781) ANKRD46 (ENSRROG00000043205) SNX31 (ENSRROG00000035914) ENSRROG00000042796 ENSRROG00000032856 ZNF706 (ENSRROG00000033465) ENSRROG00000035017 #22 GRHL2 (ENSRROG00000007872) ENSRROG00000030696 NCALD (ENSRROG00000044296) Golden snub-nosed monkey MODERN SPECIES 1908 ENSRROG00000038213 #22 SEC23IP (ENSRROG00000035815) MCMBP (ENSRROG00000014769) INPP5F (ENSRROG00000037556) ENSRROG00000044558 BAG3 (ENSRROG00000038656) ENSRROG00000037188 TIAL1 (ENSRROG00000043377) RGS10 (ENSRROG00000030607) GRK5 (ENSRROG00000043736) PRDX3 (ENSRROG00000040925) SFXN4 (ENSRROG00000013169) DENND10 (ENSRROG00000039397) EIF3A (ENSRROG00000045359) Hominoidea ANCESTRAL SPECIES 14 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00390000010391.w.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00940000153773.a.b.a.a.a ENSGT01090000260040.a.a.b ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00390000002944.f ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 Gibbon MODERN SPECIES 6 ENSNLEG00000002742 ENSNLEG00000029708 COX6C (ENSNLEG00000002864) RGS22 (ENSNLEG00000002877) FBXO43 (ENSNLEG00000002980) ENSNLEG00000002993 SPAG1 (ENSNLEG00000002998) ENSNLEG00000030526 RNF19A (ENSNLEG00000003030) ENSNLEG00000029724 ANKRD46 (ENSNLEG00000028498) SNX31 (ENSNLEG00000003099) ENSNLEG00000003142 YWHAZ (ENSNLEG00000030006) ZNF706 (ENSNLEG00000003260) ENSNLEG00000018390 #22 GRHL2 (ENSNLEG00000003271) ENSNLEG00000030983 NCALD (ENSNLEG00000003344) ENSNLEG00000030326 RRM2B (ENSNLEG00000003370) UBR5 (ENSNLEG00000003404) ENSNLEG00000031244 ODF1 (ENSNLEG00000003644) KLF10 (ENSNLEG00000003646) AZIN1 (ENSNLEG00000003653) ATP6V1C1 (ENSNLEG00000003690) ENSNLEG00000003730 FZD6 (ENSNLEG00000003744) CTHRC1 (ENSNLEG00000003773) SLC25A32 (ENSNLEG00000003777) Hominidae ANCESTRAL SPECIES 15 ENSGT00940000160530 ENSGT00940000158854 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00390000010391.w.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00390000002944.f ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 Homo/Pan/Gorilla group ANCESTRAL SPECIES 13 ENSGT00940000160530 ENSGT00940000158854 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00390000010391.w.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b.o.a ENSGT00440000033468.c.b #22 ENSGT01090000260040.a.a.b ENSGT00390000003465.b.b.p ENSGT00940000155788 ENSGT00390000002944.f ENSGT00940000158862 ENSGT00940000154295.y.a.a ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT01050000247280 ENSGT00390000013853 ENSGT00940000158485 Gorilla MODERN SPECIES 1 ENSGGOG00000006191 FAM24B (ENSGGOG00000007190) CUZD1 (ENSGGOG00000007184) C10orf120 (ENSGGOG00000026034) HTRA1 (ENSGGOG00000004853) ARMS2 (ENSGGOG00000037501) PLEKHA1 (ENSGGOG00000005120) BTBD16 (ENSGGOG00000004960) TACC2 (ENSGGOG00000004946) ENSGGOG00000010663 ATE1 (ENSGGOG00000008233) FGFR2 (ENSGGOG00000008336) ENSGGOG00000024510 WDR11 (ENSGGOG00000003069) ENSGGOG00000011322 ENSGGOG00000025941 #22 SEC23IP (ENSGGOG00000003921) MCMBP (ENSGGOG00000006006) INPP5F (ENSGGOG00000005991) ENSGGOG00000022627 BAG3 (ENSGGOG00000011503) ENSGGOG00000024741 TIAL1 (ENSGGOG00000001816) ENSGGOG00000041190 RGS10 (ENSGGOG00000008414) ENSGGOG00000042904 GRK5 (ENSGGOG00000011618) PRDX3 (ENSGGOG00000026364) SFXN4 (ENSGGOG00000036305) DENND10 (ENSGGOG00000000888) EIF3A (ENSGGOG00000000036) Homo/Pan group ANCESTRAL SPECIES 12 ENSGT00940000163468 ENSGT00940000160530 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00390000010391.w.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b.o.a ENSGT00440000033468.c.b #22 ENSGT01090000260040.a.a.b ENSGT00390000003465.b.b.p ENSGT00940000155788 ENSGT00390000002944.f ENSGT00940000158862 ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 Pan ANCESTRAL SPECIES 11 ENSGT00940000154984.C ENSGT00940000163468 ENSGT00940000160530 ENSGT00940000154684 ENSGT00940000162275 ENSGT00500000044936 ENSGT00530000063692.a ENSGT00390000008918.b ENSGT00940000154697.a.b ENSGT00940000158703 ENSGT00940000157094 ENSGT00950000183212.A ENSGT00940000153773.a.b.b ENSGT01090000260040.a.a.a.r ENSGT00390000003465.b.b.o.a ENSGT00440000033468.c.b #22 ENSGT00940000155788 ENSGT00390000002944.f ENSGT00940000158862 ENSGT00390000013305.a.b ENSGT00940000156357 ENSGT00440000038909 ENSGT00940000159405 ENSGT00950000182995.e.b ENSGT00390000004263.a ENSGT00390000013853 ENSGT00940000158485 ENSGT00390000018094 ENSGT00920000149145 ENSGT00390000005711 ENSGT00940000155236 Bonobo MODERN SPECIES 1 ENSPPAG00000026413 FAM24B (ENSPPAG00000030186) CUZD1 (ENSPPAG00000038806) C10orf120 (ENSPPAG00000027128) DMBT1 (ENSPPAG00000029246) HTRA1 (ENSPPAG00000000055) ARMS2 (ENSPPAG00000041770) PLEKHA1 (ENSPPAG00000003709) BTBD16 (ENSPPAG00000042790) TACC2 (ENSPPAG00000038587) ENSPPAG00000035638 ATE1 (ENSPPAG00000039734) FGFR2 (ENSPPAG00000034123) WDR11 (ENSPPAG00000034753) PLPP4 (ENSPPAG00000040406) ENSPPAG00000035383 #22 SEC23IP (ENSPPAG00000021343) MCMBP (ENSPPAG00000041372) INPP5F (ENSPPAG00000028448) ENSPPAG00000030508 BAG3 (ENSPPAG00000042723) ENSPPAG00000036209 TIAL1 (ENSPPAG00000043098) RGS10 (ENSPPAG00000028477) GRK5 (ENSPPAG00000028552) PRDX3 (ENSPPAG00000029603) SFXN4 (ENSPPAG00000035782) DENND10 (ENSPPAG00000027869) EIF3A (ENSPPAG00000028284) ENSPPAG00000033515 PRLHR (ENSPPAG00000002478) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 21 OSR2 (ENSPTRG00000020463) VPS13B (ENSPTRG00000020464) ENSPTRG00000044726 COX6C (ENSPTRG00000020467) RGS22 (ENSPTRG00000020468) FBXO43 (ENSPTRG00000020469) POLR2K (ENSPTRG00000020470) SPAG1 (ENSPTRG00000020471) ENSPTRG00000046118 RNF19A (ENSPTRG00000020472) ANKRD46 (ENSPTRG00000020473) SNX31 (ENSPTRG00000020474) PABPC1 (ENSPTRG00000047939) ENSPTRG00000048115 ZNF706 (ENSPTRG00000051229) ENSPTRG00000043738 #22 GRHL2 (ENSPTRG00000020479) ENSPTRG00000049988 NCALD (ENSPTRG00000052014) RRM2B (ENSPTRG00000020481) UBR5 (ENSPTRG00000020482) ODF1 (ENSPTRG00000020483) KLF10 (ENSPTRG00000020484) AZIN1 (ENSPTRG00000020485) ATP6V1C1 (ENSPTRG00000020486) BAALC (ENSPTRG00000020488) FZD6 (ENSPTRG00000020490) CTHRC1 (ENSPTRG00000020491) SLC25A32 (ENSPTRG00000020492) DCAF13 (ENSPTRG00000020493) RIMS2 (ENSPTRG00000020494) Chimpanzee MODERN SPECIES 1 ENSPTRG00000048474 FAM24B (ENSPTRG00000034300) CUZD1 (ENSPTRG00000003015) C10H10orf120 (ENSPTRG00000003012) DMBT1 (ENSPTRG00000022758) HTRA1 (ENSPTRG00000003011) ARMS2 (ENSPTRG00000051999) PLEKHA1 (ENSPTRG00000003010) BTBD16 (ENSPTRG00000003009) TACC2 (ENSPTRG00000003008) NSMCE4A (ENSPTRG00000003006) ATE1 (ENSPTRG00000003005) FGFR2 (ENSPTRG00000003003) WDR11 (ENSPTRG00000003004) PLPP4 (ENSPTRG00000029684) ENSPTRG00000048120 #22 SEC23IP (ENSPTRG00000003001) MCMBP (ENSPTRG00000003000) INPP5F (ENSPTRG00000022873) ENSPTRG00000051748 BAG3 (ENSPTRG00000002998) ENSPTRG00000040193 ENSPTRG00000046181 TIAL1 (ENSPTRG00000002996) RGS10 (ENSPTRG00000002995) GRK5 (ENSPTRG00000002993) PRDX3 (ENSPTRG00000002992) SFXN4 (ENSPTRG00000002990) DENND10 (ENSPTRG00000002989) EIF3A (ENSPTRG00000002988) NANOS1 (ENSPTRG00000013314) Platyrrhini ANCESTRAL SPECIES 6 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 966 NRG2 (ENSANAG00000020081) PURA (ENSANAG00000035484) IGIP (ENSANAG00000016486) CYSTM1 (ENSANAG00000036421) PFDN1 (ENSANAG00000026284) HBEGF (ENSANAG00000025689) SLC4A9 (ENSANAG00000035536) ENSANAG00000037215 ENSANAG00000035559 ANKHD1 (ENSANAG00000035164) SRA1 (ENSANAG00000020391) APBB3 (ENSANAG00000034312) ENSANAG00000033588 SLC35A4 (ENSANAG00000016426) ENSANAG00000036424 ENSANAG00000034215 #22 CD14 (ENSANAG00000034732) TMCO6 (ENSANAG00000034193) ENSANAG00000036345 IK (ENSANAG00000037081) WDR55 (ENSANAG00000029439) ENSANAG00000037212 HARS1 (ENSANAG00000034093) HARS2 (ENSANAG00000028635) ZMAT2 (ENSANAG00000028921) ENSANAG00000028755 ENSANAG00000026457 PCDHAC2 (ENSANAG00000033673) ENSANAG00000024712 PCDHB3 (ENSANAG00000029348) PCDHB4 (ENSANAG00000032867) Mas night monkey MODERN SPECIES 1031 RDH16 (ENSANAG00000032638) SDR9C7 (ENSANAG00000026961) ENSANAG00000034716 HSD17B6 (ENSANAG00000033905) #20 PRIM1 (ENSANAG00000027645) #21 ENSANAG00000034226 #22 ENSANAG00000033609 #23 ATP5F1B (ENSANAG00000032807) #24 BAZ2A (ENSANAG00000019057) #25 RBMS2 (ENSANAG00000038292) #27 GLS2 (ENSANAG00000021030) #28 SPRYD4 (ENSANAG00000036275) #29 MIP (ENSANAG00000028757) #30 TIMELESS (ENSANAG00000035017) APOF (ENSANAG00000026056) STAT2 (ENSANAG00000032564) IL23A (ENSANAG00000020935) PAN2 (ENSANAG00000036468) CNPY2 (ENSANAG00000038284) CS (ENSANAG00000036325) COQ10A (ENSANAG00000034472) Cebidae ANCESTRAL SPECIES 2 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Marmoset MODERN SPECIES 21 LRP1 (ENSCJAG00000010289) ENSCJAG00000070274 ENSCJAG00000086164 STAT6 (ENSCJAG00000010327) NAB2 (ENSCJAG00000010414) NEMP1 (ENSCJAG00000010449) MYO1A (ENSCJAG00000010493) ENSCJAG00000078826 ZBTB39 (ENSCJAG00000045887) GPR182 (ENSCJAG00000010632) RDH16 (ENSCJAG00000071462) SDR9C7 (ENSCJAG00000042213) ENSCJAG00000080305 HSD17B6 (ENSCJAG00000010652) #20 PRIM1 (ENSCJAG00000010662) #21 ENSCJAG00000045644 #22 ENSCJAG00000067823 PTGES3 (ENSCJAG00000010724) #23 ENSCJAG00000033571 #24 BAZ2A (ENSCJAG00000010774) #25 RBMS2 (ENSCJAG00000010803) #27 GLS2 (ENSCJAG00000010875) #28 SPRYD4 (ENSCJAG00000039389) #29 MIP (ENSCJAG00000010971) #30 TIMELESS (ENSCJAG00000010984) APOF (ENSCJAG00000011065) STAT2 (ENSCJAG00000011101) IL23A (ENSCJAG00000048090) PAN2 (ENSCJAG00000011141) CNPY2 (ENSCJAG00000011259) CS (ENSCJAG00000011275) Cebidae_a ANCESTRAL SPECIES 5 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Capuchin MODERN SPECIES 96 STAC3 (ENSCCAG00000026123) NDUFA4L2 (ENSCCAG00000023385) SHMT2 (ENSCCAG00000032795) NXPH4 (ENSCCAG00000021360) LRP1 (ENSCCAG00000037240) STAT6 (ENSCCAG00000021197) NAB2 (ENSCCAG00000034977) NEMP1 (ENSCCAG00000037438) MYO1A (ENSCCAG00000028277) TAC3 (ENSCCAG00000025170) ZBTB39 (ENSCCAG00000015143) RDH16 (ENSCCAG00000027610) SDR9C7 (ENSCCAG00000037710) HSD17B6 (ENSCCAG00000030523) #20 PRIM1 (ENSCCAG00000017735) #21 NACA (ENSCCAG00000023819) #22 ENSCCAG00000028637 #23 ENSCCAG00000026178 #24 BAZ2A (ENSCCAG00000033508) #25 RBMS2 (ENSCCAG00000030291) #27 ENSCCAG00000022716 #28 SPRYD4 (ENSCCAG00000028028) #29 MIP (ENSCCAG00000032355) #30 TIMELESS (ENSCCAG00000036271) APOF (ENSCCAG00000025558) STAT2 (ENSCCAG00000026474) IL23A (ENSCCAG00000016182) PAN2 (ENSCCAG00000036637) CNPY2 (ENSCCAG00000028288) CS (ENSCCAG00000033165) COQ10A (ENSCCAG00000032473) Bolivian squirrel monkey MODERN SPECIES 47 C10orf88 (ENSSBOG00000030071) FAM24A (ENSSBOG00000031885) FAM24B (ENSSBOG00000034235) CUZD1 (ENSSBOG00000019778) C10orf120 (ENSSBOG00000021674) ENSSBOG00000033598 HTRA1 (ENSSBOG00000022966) PLEKHA1 (ENSSBOG00000032388) BTBD16 (ENSSBOG00000030401) TACC2 (ENSSBOG00000034773) NSMCE4A (ENSSBOG00000034475) ATE1 (ENSSBOG00000033557) FGFR2 (ENSSBOG00000016345) WDR11 (ENSSBOG00000034391) PLPP4 (ENSSBOG00000027942) ENSSBOG00000028957 #22 SEC23IP (ENSSBOG00000028088) MCMBP (ENSSBOG00000029485) INPP5F (ENSSBOG00000034456) BAG3 (ENSSBOG00000033183) TIAL1 (ENSSBOG00000028408) ENSSBOG00000028139 RGS10 (ENSSBOG00000023795) GRK5 (ENSSBOG00000025587) ENSSBOG00000034959 PRDX3 (ENSSBOG00000033406) SFXN4 (ENSSBOG00000036043) DENND10 (ENSSBOG00000019475) EIF3A (ENSSBOG00000011487) CACUL1 (ENSSBOG00000024256) PRLHR (ENSSBOG00000018248) Strepsirrhini ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Bushbaby MODERN SPECIES 124 ENSOGAG00000027585 TEX46 (ENSOGAG00000025352) KDM1A (ENSOGAG00000002158) LUZP1 (ENSOGAG00000002161) ENSOGAG00000031738 ENSOGAG00000033955 ##26 HNRNPR (ENSOGAG00000009179) ENSOGAG00000009181 ASAP3 (ENSOGAG00000009200) ENSOGAG00000005617 NDP (ENSOGAG00000006156) EFHC2 (ENSOGAG00000006158) ENSOGAG00000030222 FUNDC1 (ENSOGAG00000008188) ENSOGAG00000029882 ENSOGAG00000029756 #22 ENSOGAG00000015534 KDM6A (ENSOGAG00000015535) DIPK2B (ENSOGAG00000002115) Lemuriformes ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Mouse lemur MODERN SPECIES 16 WDR83OS (ENSMICG00000041694) MAN2B1 (ENSMICG00000030973) ZNF791 (ENSMICG00000001543) ENSMICG00000027449 ZNF564 (ENSMICG00000031514) ZNF709 (ENSMICG00000041711) ENSMICG00000042203 ZNF136 (ENSMICG00000006354) ENSMICG00000044274 ENSMICG00000048081 ENSMICG00000027179 ENSMICG00000033630 ENSMICG00000042598 ENSMICG00000045859 ENSMICG00000041956 ENSMICG00000015430 #22 ENSMICG00000027210 ENSMICG00000034536 ENSMICG00000041761 ENSMICG00000038248 ACP5 (ENSMICG00000007032) ELOF1 (ENSMICG00000011684) CNN1 (ENSMICG00000011674) ECSIT (ENSMICG00000043164) ATP13A1 (ENSMICG00000005954) GMIP (ENSMICG00000005944) LPAR2 (ENSMICG00000047382) PBX4 (ENSMICG00000005939) CILP2 (ENSMICG00000038618) YJEFN3 (ENSMICG00000043804) NDUFA13 (ENSMICG00000027711) Lemuriformes_a ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Coquerels sifaka MODERN SPECIES 346 PLOD2 (ENSPCOG00000014444) PLSCR4 (ENSPCOG00000025204) ENSPCOG00000020032 ENSPCOG00000019592 PLSCR5 (ENSPCOG00000028578) SCAND3 (ENSPCOG00000028692) TRIM27 (ENSPCOG00000018155) APELA (ENSPCOG00000017930) SMIM31 (ENSPCOG00000016981) ENSPCOG00000020782 #22 ENSPCOG00000021363 ENSPCOG00000015982 MARCHF1 (ENSPCOG00000014699) TMA16 (ENSPCOG00000018500) TKTL2 (ENSPCOG00000012803) NPY5R (ENSPCOG00000026942) NPY1R (ENSPCOG00000013845) Euarchontoglires_A ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Glires ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Lagomorpha ANCESTRAL SPECIES 30 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Pika MODERN SPECIES 1642 ENSOPRG00000001781 #22 PTGES3 (ENSOPRG00000001757) #23 ATP5F1B (ENSOPRG00000001737) #24 BAZ2A (ENSOPRG00000001687) #25 RBMS2 (ENSOPRG00000001667) #27 GLS2 (ENSOPRG00000001636) #28 SPRYD4 (ENSOPRG00000001631) #29 MIP (ENSOPRG00000001623) #30 TIMELESS (ENSOPRG00000001561) APOF (ENSOPRG00000001553) STAT2 (ENSOPRG00000001512) IL23A (ENSOPRG00000001506) PAN2 (ENSOPRG00000001468) CNPY2 (ENSOPRG00000001459) CS (ENSOPRG00000001441) COQ10A (ENSOPRG00000001423) Rodentia ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Rodentia_A ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Hystricomorpha ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Hystricomorpha_a ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Degu MODERN SPECIES 328 ENSODEG00000019060 ENSODEG00000005499 #21 ENSODEG00000005695 #22 ENSODEG00000005729 #23 ENSODEG00000005809 #24 BAZ2A (ENSODEG00000005990) #25 RBMS2 (ENSODEG00000006249) #27 ENSODEG00000019283 ENSODEG00000006174 ##28 ENSODEG00000006227 #28 SPRYD4 (ENSODEG00000006258) #29 MIP (ENSODEG00000006269) #30 TIMELESS (ENSODEG00000006692) APOF (ENSODEG00000006931) STAT2 (ENSODEG00000006968) IL23A (ENSODEG00000007085) PAN2 (ENSODEG00000007203) ENSODEG00000004820 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 21 ILVBL (ENSHGLG00000006099) SYDE1 (ENSHGLG00000004301) OR1I1 (ENSHGLG00000020056) CASP14 (ENSHGLG00000003676) ENSHGLG00000011020 CCDC105 (ENSHGLG00000009025) SLC1A6 (ENSHGLG00000044141) ENSHGLG00000020442 ENSHGLG00000005565 ENSHGLG00000043939 ENSHGLG00000020237 ENSHGLG00000034158 ENSHGLG00000037347 ENSHGLG00000038574 ENSHGLG00000048956 ENSHGLG00000041413 #22 ENSHGLG00000036859 ENSHGLG00000032390 ENSHGLG00000035999 NDUFB7 (ENSHGLG00000044161) ENSHGLG00000018607 DNAJB1 (ENSHGLG00000016171) GIPC1 (ENSHGLG00000035217) PTGER1 (ENSHGLG00000015428) PKN1 (ENSHGLG00000015605) DDX39A (ENSHGLG00000018263) ENSHGLG00000042784 ADGRL1 (ENSHGLG00000011314) ENSHGLG00000009203 ENSHGLG00000007137 ENSHGLG00000041868 Naked mole-rat female MODERN SPECIES 8 ENSHGLG00000050903 STAT6 (ENSHGLG00000018890) NAB2 (ENSHGLG00000046085) TMEM194A (ENSHGLG00000050319) MYO1A (ENSHGLG00000016942) TAC3 (ENSHGLG00000045829) ZBTB39 (ENSHGLG00000040796) ENSHGLG00000017107 ENSHGLG00000015298 SDR9C7 (ENSHGLG00000015339) ENSHGLG00000041982 #20 HSD17B6 (ENSHGLG00000016546) #20 ENSHGLG00000045594 #20 ENSHGLG00000049699 PRIM1 (ENSHGLG00000034649) #21 ENSHGLG00000006553 #22 PTGES3 (ENSHGLG00000033363) #23 ATP5F1B (ENSHGLG00000006040) #24 ENSHGLG00000032509 #25 RBMS2 (ENSHGLG00000018238) #27 GLS2 (ENSHGLG00000013406) #28 SPRYD4 (ENSHGLG00000016750) #29 MIP (ENSHGLG00000016789) #30 TIMELESS (ENSHGLG00000016404) APOF (ENSHGLG00000008028) STAT2 (ENSHGLG00000016677) IL23A (ENSHGLG00000038635) PAN2 (ENSHGLG00000005647) CNPY2 (ENSHGLG00000005988) ENSHGLG00000006836 ENSHGLG00000049591 Sciuridae ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Marmotini ANCESTRAL SPECIES 4 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800.ob #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Alpin marmot MODERN SPECIES 11 ENSMMMG00000012783 SHMT2 (ENSMMMG00000012788) NXPH4 (ENSMMMG00000012812) LRP1 (ENSMMMG00000012817) STAT6 (ENSMMMG00000012942) NAB2 (ENSMMMG00000012959) NEMP1 (ENSMMMG00000012998) MYO1A (ENSMMMG00000013029) TAC3 (ENSMMMG00000013065) ZBTB39 (ENSMMMG00000013072) GPR182 (ENSMMMG00000013074) RDH16 (ENSMMMG00000013078) SDR9C7 (ENSMMMG00000013089) ENSMMMG00000013092 PRIM1 (ENSMMMG00000013128) #21 ENSMMMG00000013160 #22 PTGES3 (ENSMMMG00000013173) #23 ATP5F1B (ENSMMMG00000013206) #24 BAZ2A (ENSMMMG00000013218) #25 RBMS2 (ENSMMMG00000013350) #27 GLS2 (ENSMMMG00000013386) #28 SPRYD4 (ENSMMMG00000013401) #29 MIP (ENSMMMG00000013405) #30 TIMELESS (ENSMMMG00000013421) ENSMMMG00000013511 APOF (ENSMMMG00000013515) STAT2 (ENSMMMG00000013531) IL23A (ENSMMMG00000013576) PAN2 (ENSMMMG00000013586) CNPY2 (ENSMMMG00000013663) CS (ENSMMMG00000013670) Marmotini_b ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Arctic ground squirrel MODERN SPECIES 197 R3HDM2 (ENSUPAG00010016815) STAC3 (ENSUPAG00010016748) SHMT2 (ENSUPAG00010016720) NXPH4 (ENSUPAG00010016712) LRP1 (ENSUPAG00010016565) STAT6 (ENSUPAG00010016543) NAB2 (ENSUPAG00010016528) NEMP1 (ENSUPAG00010016506) MYO1A (ENSUPAG00010016464) TAC3 (ENSUPAG00010016446) ZBTB39 (ENSUPAG00010016442) GPR182 (ENSUPAG00010016435) RDH16 (ENSUPAG00010016427) SDR9C7 (ENSUPAG00010016416) PRIM1 (ENSUPAG00010016373) #21 ENSUPAG00010016347 #22 PTGES3 (ENSUPAG00010016328) #23 ATP5F1B (ENSUPAG00010016293) #24 BAZ2A (ENSUPAG00010016135) #25 RBMS2 (ENSUPAG00010016103) #27 GLS2 (ENSUPAG00010016072) #28 SPRYD4 (ENSUPAG00010016065) #29 MIP (ENSUPAG00010016061) #30 TIMELESS (ENSUPAG00010015979) ENSUPAG00010015975 APOF (ENSUPAG00010015964) STAT2 (ENSUPAG00010015949) IL23A (ENSUPAG00010015944) PAN2 (ENSUPAG00010015834) CNPY2 (ENSUPAG00010015808) CS (ENSUPAG00010015794) Rodentia_B ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Myomorpha ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Muroidea ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Muroidea_A ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Cricetidae ANCESTRAL SPECIES 21 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Cricetinae ANCESTRAL SPECIES 22 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.q ENSGT00940000154118.b.r ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Chinese hamster chok1gshd MODERN SPECIES 352 Lrp1 (ENSCGRG00001011627) ENSCGRG00001002945 Stat6 (ENSCGRG00001020526) Nab2 (ENSCGRG00001018114) Nemp1 (ENSCGRG00001014268) Myo1a (ENSCGRG00001005373) Tac2 (ENSCGRG00001014061) Zbtb39 (ENSCGRG00001001407) Gpr182 (ENSCGRG00001011877) ENSCGRG00001016912 ENSCGRG00001003209 ENSCGRG00001023626 Sdr9c7 (ENSCGRG00001014788) Hsd17b6 (ENSCGRG00001003931) #20 Prim1 (ENSCGRG00001022266) #21 ENSCGRG00001019512 #22 Ptges3 (ENSCGRG00001015638) #23 Atp5b (ENSCGRG00001017195) #24 Baz2a (ENSCGRG00001005683) #25 Rbms2 (ENSCGRG00001023923) #27 Gls2 (ENSCGRG00001012770) #28 Spryd4 (ENSCGRG00001016587) #29 Mip (ENSCGRG00001020147) #30 Timeless (ENSCGRG00001012271) ENSCGRG00001001978 Apof (ENSCGRG00001021570) Stat2 (ENSCGRG00001011774) Il23a (ENSCGRG00001004465) Pan2 (ENSCGRG00001019707) Cnpy2 (ENSCGRG00001013192) ENSCGRG00001012140 Golden Hamster MODERN SPECIES 710 Stac3 (ENSMAUG00000017379) ENSMAUG00000016907 Shmt2 (ENSMAUG00000014511) Nxph4 (ENSMAUG00000010802) Lrp1 (ENSMAUG00000009058) Stat6 (ENSMAUG00000000383) Nab2 (ENSMAUG00000004697) Nemp1 (ENSMAUG00000004172) Myo1a (ENSMAUG00000018930) Tac2 (ENSMAUG00000018582) Zbtb39 (ENSMAUG00000017199) Gpr182 (ENSMAUG00000015199) ENSMAUG00000016734 Sdr9c7 (ENSMAUG00000007487) Prim1 (ENSMAUG00000008749) #21 ENSMAUG00000015543 #22 Ptges3 (ENSMAUG00000016336) #23 Baz2a (ENSMAUG00000020341) #25 ENSMAUG00000016984 #27 Gls2 (ENSMAUG00000019243) #28 Spryd4 (ENSMAUG00000018363) #29 Mip (ENSMAUG00000012086) #30 ENSMAUG00000010695 Apof (ENSMAUG00000017165) Stat2 (ENSMAUG00000012842) Il23a (ENSMAUG00000011310) Pan2 (ENSMAUG00000012602) Cnpy2 (ENSMAUG00000001150) ENSMAUG00000020525 Coq10a (ENSMAUG00000010816) Ankrd52 (ENSMAUG00000016598) Cricetidae_B ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Northern American deer mouse MODERN SPECIES 9 Nab2 (ENSPEMG00000003067) Nemp1 (ENSPEMG00000000349) Myo1a (ENSPEMG00000018549) Tac2 (ENSPEMG00000007115) Zbtb39 (ENSPEMG00000001529) Gpr182 (ENSPEMG00000012025) ENSPEMG00000008778 ENSPEMG00000030154 ENSPEMG00000029591 ENSPEMG00000025685 ENSPEMG00000025627 ENSPEMG00000025710 Sdr9c7 (ENSPEMG00000023090) Hsd17b6 (ENSPEMG00000009978) #20 Prim1 (ENSPEMG00000011486) #21 ENSPEMG00000005647 #22 Ptges3 (ENSPEMG00000010029) #23 Atp5b (ENSPEMG00000013983) #24 Baz2a (ENSPEMG00000018987) #25 Rbms2 (ENSPEMG00000012948) #27 Gls2 (ENSPEMG00000013787) #28 Spryd4 (ENSPEMG00000029549) #29 Mip (ENSPEMG00000014379) #30 Timeless (ENSPEMG00000017944) ENSPEMG00000031146 Tespa1 (ENSPEMG00000023928) ENSPEMG00000026112 Neurod4 (ENSPEMG00000000933) Or9k7 (ENSPEMG00000005610) ENSPEMG00000030893 ENSPEMG00000028193 Prairie vole MODERN SPECIES 99 ENSMOCG00000016759 ENSMOCG00000015444 ENSMOCG00000022803 ENSMOCG00000022418 #22 S100a10 (ENSMOCG00000004139) Tchhl1 (ENSMOCG00000021433) ENSMOCG00000007199 ENSMOCG00000000629 ENSMOCG00000022052 Crnn (ENSMOCG00000019488) ENSMOCG00000004193 ENSMOCG00000021258 ENSMOCG00000010107 ENSMOCG00000008570 2310050C09Rik (ENSMOCG00000000973) ENSMOCG00000005487 Kprp (ENSMOCG00000005848) ENSMOCG00000005788 ENSMOCG00000004279 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 606 ENSNGAG00000020260 ENSNGAG00000020704 #20 ENSNGAG00000020955 Sdr9c7 (ENSNGAG00000021175) ENSNGAG00000007035 #21 ENSNGAG00000009199 #22 Ptges3 (ENSNGAG00000010865) #23 Atp5b (ENSNGAG00000021013) #24 Baz2a (ENSNGAG00000021737) #25 Rbms2 (ENSNGAG00000001476) #27 Gls2 (ENSNGAG00000016238) #28 Spryd4 (ENSNGAG00000012514) #29 Upper Galilee mountains blind mole rat MODERN SPECIES 682 ENSNGAG00000024170 Nmbr (ENSNGAG00000001918) Vta1 (ENSNGAG00000019074) Adgrg6 (ENSNGAG00000024324) Hivep2 (ENSNGAG00000022374) Aig1 (ENSNGAG00000009899) Adat2 (ENSNGAG00000022136) Pex3 (ENSNGAG00000023273) Fuca2 (ENSNGAG00000024268) Phactr2 (ENSNGAG00000011617) Ltv1 (ENSNGAG00000006148) Zc2hc1b (ENSNGAG00000019507) ENSNGAG00000011361 ENSNGAG00000022505 ENSNGAG00000013436 #22 Sf3b5 (ENSNGAG00000010732) ENSNGAG00000017949 ENSNGAG00000017852 ENSNGAG00000014438 Laurasiatheria ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Artiodactyla ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Camelidae ANCESTRAL SPECIES 79 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00940000164642 Arabian camel MODERN SPECIES 3 ENSCDRG00005009738 ENSCDRG00005009723 ENSCDRG00005009708 ENSCDRG00005009681 OR6C4 (ENSCDRG00005009660) ENSCDRG00005009632 ENSCDRG00005009589 ENSCDRG00005009578 ENSCDRG00005009562 ENSCDRG00005009453 ENSCDRG00005009428 ENSCDRG00005009400 ENSCDRG00005009340 ENSCDRG00005009285 PRIM1 (ENSCDRG00005009145) #21 ENSCDRG00005009077 #22 PTGES3 (ENSCDRG00005008722) #23 ATP5F1B (ENSCDRG00005008606) #24 BAZ2A (ENSCDRG00005007803) #25 RBMS2 (ENSCDRG00005007594) #27 GLS2 (ENSCDRG00005007217) #28 SPRYD4 (ENSCDRG00005007190) #29 MIP (ENSCDRG00005007133) #30 TIMELESS (ENSCDRG00005006669) ENSCDRG00005006594 APOF (ENSCDRG00005006565) STAT2 (ENSCDRG00005006459) IL23A (ENSCDRG00005006395) PAN2 (ENSCDRG00005006321) CNPY2 (ENSCDRG00005006281) CS (ENSCDRG00005006204) Alpaca MODERN SPECIES 2389 ENSVPAG00000004028 #22 PTGES3 (ENSVPAG00000004026) #23 ATP5F1B (ENSVPAG00000004025) #24 BAZ2A (ENSVPAG00000004023) #25 RBMS2 (ENSVPAG00000004022) #27 Artiodactyla_b DUPLICATION Artiodactyla_b DUPLICATION Artiodactyla_b ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Cetacea ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Odontoceti ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Odontoceti_b ANCESTRAL SPECIES 19 ENSGT00390000003680.b ENSGT00390000012840 ENSGT00940000164066 ENSGT01100000263544.c.b ENSGT00950000183176.b.f ENSGT00390000001958.n.b ENSGT00390000017350 ENSGT00390000010285.c ENSGT00940000158322 ENSGT00390000010606 ENSGT00940000156368.b ENSGT00940000157655 ENSGT00940000157830 ENSGT00390000008778 ENSGT00940000156966 ENSGT00440000033468.c.b.q.a #22 ENSGT00390000002833 ENSGT00940000159511 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934 ENSGT00530000063829.A ENSGT00510000048688 ENSGT00940000156408 ENSGT00390000006173 ENSGT00940000162274 ENSGT00390000012916.z ENSGT00390000005801 ENSGT00530000063576.B ENSGT00940000157222 ENSGT00390000018110 Monodontidae ANCESTRAL SPECIES 20 ENSGT00390000003680.b ENSGT00390000012840.s ENSGT00940000164066 ENSGT01100000263544.c.b ENSGT00950000183176.b.f ENSGT00390000001958.n.b ENSGT00390000017350 ENSGT00390000010285.c ENSGT00940000158322 ENSGT00390000010606 ENSGT00940000156368.b ENSGT00940000157655 ENSGT00940000157830 ENSGT00390000008778 ENSGT00940000156966 ENSGT00440000033468.c.b.q.a #22 ENSGT00390000002833 ENSGT00940000159511 ENSGT00530000063023.A.b ENSGT00390000007597 ENSGT00940000156934 ENSGT00530000063829.A ENSGT00510000048688 ENSGT00940000156408 ENSGT00390000006173 ENSGT00940000162274 ENSGT00390000012916.z ENSGT00390000005801 ENSGT00530000063576.B ENSGT00940000157222 ENSGT00390000018110 Beluga whale MODERN SPECIES 9 PIP4P2 (ENSDLEG00000000505) ENSDLEG00000000412 LRRC69 (ENSDLEG00000000353) SLC26A7 (ENSDLEG00000000245) RUNX1T1 (ENSDLEG00000000164) ENSDLEG00000000125 TRIQK (ENSDLEG00000000114) ENSDLEG00000000093 RBM12B (ENSDLEG00000003583) TMEM67 (ENSDLEG00000003533) PDP1 (ENSDLEG00000003518) CDH17 (ENSDLEG00000003453) GEM (ENSDLEG00000003439) FSBP (ENSDLEG00000003437) RAD54B (ENSDLEG00000003431) ENSDLEG00000003429 #22 VIRMA (ENSDLEG00000003400) ESRP1 (ENSDLEG00000003391) DPY19L4 (ENSDLEG00000003350) CCNE2 (ENSDLEG00000003335) INTS8 (ENSDLEG00000003281) TP53INP1 (ENSDLEG00000003269) NDUFAF6 (ENSDLEG00000003260) PLEKHF2 (ENSDLEG00000003248) CFAP418 (ENSDLEG00000003235) ENSDLEG00000003204 GDF6 (ENSDLEG00000003195) ENSDLEG00000003190 MTERF3 (ENSDLEG00000003175) PTDSS1 (ENSDLEG00000003149) SDC2 (ENSDLEG00000003137) Sperm whale MODERN SPECIES 6 SLC26A7 (ENSPCTG00005008652) ENSPCTG00005008617 RUNX1T1 (ENSPCTG00005008176) ENSPCTG00005008141 TRIQK (ENSPCTG00005008124) ENSPCTG00005008114 ENSPCTG00005008101 RBM12B (ENSPCTG00005008096) ENSPCTG00005008073 TMEM67 (ENSPCTG00005007975) PDP1 (ENSPCTG00005007940) ENSPCTG00005007923 CDH17 (ENSPCTG00005007812) GEM (ENSPCTG00005007759) RAD54B (ENSPCTG00005007630) ENSPCTG00005007598 #22 VIRMA (ENSPCTG00005007475) ESRP1 (ENSPCTG00005007404) DPY19L4 (ENSPCTG00005007336) INTS8 (ENSPCTG00005007091) CCNE2 (ENSPCTG00005007033) ENSPCTG00005007014 TP53INP1 (ENSPCTG00005006971) NDUFAF6 (ENSPCTG00005006899) PLEKHF2 (ENSPCTG00005006872) C15H8orf37 (ENSPCTG00005006841) ENSPCTG00005006830 GDF6 (ENSPCTG00005006818) ENSPCTG00005006779 MTERF3 (ENSPCTG00005006724) PTDSS1 (ENSPCTG00005006587) Pecora ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Percora_a ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Bovidae ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Caprinae ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.a #22 Goat MODERN SPECIES 16 ENSCHIG00000021894 SERPINB8 (ENSCHIG00000019063) CDH7 (ENSCHIG00000016363) CDH19 (ENSCHIG00000009966) DSEL (ENSCHIG00000000464) TMX3 (ENSCHIG00000000388) ENSCHIG00000000357 DOK6 (ENSCHIG00000000290) CD226 (ENSCHIG00000000255) RTTN (ENSCHIG00000009958) ENSCHIG00000024754 ENSCHIG00000021728 CBLN2 (ENSCHIG00000018855) NETO1 (ENSCHIG00000013781) ENSCHIG00000009717 ENSCHIG00000009949 #22 FBXO15 (ENSCHIG00000000420) TIMM21 (ENSCHIG00000000355) CYB5A (ENSCHIG00000000287) C18orf63 (ENSCHIG00000000176) DIPK1C (ENSCHIG00000000144) CNDP2 (ENSCHIG00000000112) CNDP1 (ENSCHIG00000010519) ZNF407 (ENSCHIG00000000452) PTGR3 (ENSCHIG00000019084) TSHZ1 (ENSCHIG00000016422) ZNF516 (ENSCHIG00000014196) ENSCHIG00000010813 ZNF236 (ENSCHIG00000000391) ENSCHIG00000000358 GALR1 (ENSCHIG00000000288) Artiodactyla_b ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.b #22 Pecora ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.b #22 Percora_a ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.b #22 Bovidae ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.b #22 Caprinae ANCESTRAL SPECIES ENSGT00440000033468.c.b.q.b #22 Goat MODERN SPECIES 27 GNRH1 (ENSCHIG00000016406) KCTD9 (ENSCHIG00000015791) CDCA2 (ENSCHIG00000018580) EBF2 (ENSCHIG00000023729) PPP2R2A (ENSCHIG00000007473) ENSCHIG00000024818 PNMA2 (ENSCHIG00000002000) DPYSL2 (ENSCHIG00000026845) ADRA1A (ENSCHIG00000021001) STMN4 (ENSCHIG00000020412) TRIM35 (ENSCHIG00000009723) PTK2B (ENSCHIG00000026234) CHRNA2 (ENSCHIG00000018927) EPHX2 (ENSCHIG00000007111) ENSCHIG00000008405 ENSCHIG00000015473 #22 ENSCHIG00000026235 ENSCHIG00000020043 APTX (ENSCHIG00000012896) ENSCHIG00000015674 SMU1 (ENSCHIG00000027107) ENSCHIG00000013974 B4GALT1 (ENSCHIG00000026540) SPINK4 (ENSCHIG00000010389) ENSCHIG00000023332 CHMP5 (ENSCHIG00000026558) NFX1 (ENSCHIG00000020037) ENSCHIG00000002384 AQP3 (ENSCHIG00000021187) NOL6 (ENSCHIG00000011813) UBE2R2 (ENSCHIG00000020551) Artiodactyla_b ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Cetacea ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Odontoceti ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Odontoceti_a ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Dolphin MODERN SPECIES 2089 PRIM1 (ENSTTRG00000002153) #21 ENSTTRG00000002150 #22 PTGES3 (ENSTTRG00000002147) #23 ATP5F1B (ENSTTRG00000002144) #24 BAZ2A (ENSTTRG00000002130) #25 RBMS2 (ENSTTRG00000002117) #27 Pecora ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Percora_a ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Bovidae ANCESTRAL SPECIES ENSGT00440000033468.c.b.r #22 Caprinae ANCESTRAL SPECIES ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.rb.b.a ENSGT00950000182834.A.a.a.w.a ENSGT00940000154118.b.rb.a.a ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.b.r #22 ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Rambouillet Sheep MODERN SPECIES 19 NAB2 (ENSOARG00020002028) NEMP1 (ENSOARG00020002060) MYO1A (ENSOARG00020002126) TAC3 (ENSOARG00020002146) ZBTB39 (ENSOARG00020002175) GPR182 (ENSOARG00020002179) ENSOARG00020002192 ENSOARG00020002206 ENSOARG00020002217 #20 ENSOARG00020002226 SDR9C7 (ENSOARG00020002232) ENSOARG00020002244 ENSOARG00020002250 #20 HSD17B6 (ENSOARG00020002262) #20 PRIM1 (ENSOARG00020002282) #21 ENSOARG00020002301 #22 ENSOARG00020002335 #23 ATP5F1B (ENSOARG00020002370) #24 BAZ2A (ENSOARG00020002394) #25 RBMS2 (ENSOARG00020002450) #27 ENSOARG00020002476 GLS2 (ENSOARG00020002498) #28 SPRYD4 (ENSOARG00020002567) #29 MIP (ENSOARG00020002585) #30 TIMELESS (ENSOARG00020002605) ENSOARG00020002631 APOF (ENSOARG00020002637) STAT2 (ENSOARG00020002651) IL23A (ENSOARG00020002694) PAN2 (ENSOARG00020002722) CNPY2 (ENSOARG00020002812) Goat MODERN SPECIES 23 TAC1 (ENSCHIG00000022845) ENSCHIG00000008860 DLX5 (ENSCHIG00000009075) DLX6 (ENSCHIG00000022329) ENSCHIG00000020492 ENSCHIG00000010410 SLC25A13 (ENSCHIG00000022398) DYNC1I1 (ENSCHIG00000013760) ENSCHIG00000024760 PDK4 (ENSCHIG00000013432) ASB4 (ENSCHIG00000015322) PON2 (ENSCHIG00000023025) PON3 (ENSCHIG00000011355) PON1 (ENSCHIG00000012757) ENSCHIG00000026533 ENSCHIG00000017712 #22 ENSCHIG00000008653 SGCE (ENSCHIG00000012578) CASD1 (ENSCHIG00000010702) COL1A2 (ENSCHIG00000025647) BET1 (ENSCHIG00000019249) GNG11 (ENSCHIG00000024748) GNGT1 (ENSCHIG00000019362) TFPI2 (ENSCHIG00000026816) CALCR (ENSCHIG00000012930) VPS50 (ENSCHIG00000012919) HEPACAM2 (ENSCHIG00000008983) ENSCHIG00000012415 SAMD9 (ENSCHIG00000007683) CDK6 (ENSCHIG00000011604) ENSCHIG00000025157 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Chiroptera ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Microchiroptera ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Microbat MODERN SPECIES 1023 ENSMLUG00000024394 #22 ENSMLUG00000027477 ENSMLUG00000024031 ENSMLUG00000023900 TENM4 (ENSMLUG00000011352) NARS2 (ENSMLUG00000030064) GAB2 (ENSMLUG00000015964) USP35 (ENSMLUG00000015951) KCTD21 (ENSMLUG00000014632) ALG8 (ENSMLUG00000014622) ENSMLUG00000014617 THRSP (ENSMLUG00000014613) KCTD14 (ENSMLUG00000014611) INTS4 (ENSMLUG00000005683) ENSMLUG00000025569 AAMDC (ENSMLUG00000005674) Carnivora ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Caniformia ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Caniformia_b ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Mustelinae ANCESTRAL SPECIES 61 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.g #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Ferret MODERN SPECIES 340 NXPH4 (ENSMPUG00000001769) LRP1 (ENSMPUG00000001753) STAT6 (ENSMPUG00000001746) NAB2 (ENSMPUG00000001738) NEMP1 (ENSMPUG00000001732) MYO1A (ENSMPUG00000001720) TAC3 (ENSMPUG00000001702) ZBTB39 (ENSMPUG00000018500) GPR182 (ENSMPUG00000018498) RDH16 (ENSMPUG00000001697) SDR9C7 (ENSMPUG00000001689) ENSMPUG00000001685 ENSMPUG00000001683 HSD17B6 (ENSMPUG00000001678) #20 PRIM1 (ENSMPUG00000001603) #21 ENSMPUG00000001597 #22 ENSMPUG00000001589 #23 ATP5F1B (ENSMPUG00000001507) #24 BAZ2A (ENSMPUG00000001495) #25 ENSMPUG00000001490 #27 SPRYD4 (ENSMPUG00000001489) #29 GLS2 (ENSMPUG00000001477) #28 MIP (ENSMPUG00000001456) #30 ENSMPUG00000001445 APOF (ENSMPUG00000001442) STAT2 (ENSMPUG00000001431) IL23A (ENSMPUG00000001394) PAN2 (ENSMPUG00000001383) CNPY2 (ENSMPUG00000001366) CS (ENSMPUG00000001323) COQ10A (ENSMPUG00000001321) Felidae ANCESTRAL SPECIES 12 ENSGT00940000163031.b.a ENSGT00440000033329.b.a.b ENSGT01030000234522.C.b.e.a.b.i ENSGT00940000160896 ENSGT00940000155658 ENSGT00940000157557 ENSGT00940000154359.f ENSGT00390000018873 ENSGT00940000159688 ENSGT01050000244888.b.a.c.a ENSGT00950000183097.a.a.a ENSGT00940000160039 ENSGT00940000159971 ENSGT00940000157540.A.k.b ENSGT01050000244937.a.b.a ENSGT00440000033468.c.b #22 ENSGT00960000186788 ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00940000159922.b ENSGT00510000047493 ENSGT00950000183232 ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000160983 ENSGT00730000110943.A.d ENSGT00390000010397.a Cat DUPLICATION Cat MODERN SPECIES 242 SFTPD (ENSFCAG00000029978) ENSFCAG00000048777 TMEM254 (ENSFCAG00000046502) ENSFCAG00000040701 ANXA11 (ENSFCAG00000023518) ZCCHC24 (ENSFCAG00000040394) PPIF (ENSFCAG00000025543) ZMIZ1 (ENSFCAG00000011569) ENSFCAG00000000849 POLR3A (ENSFCAG00000000843) DLG5 (ENSFCAG00000002056) KCNMA1 (ENSFCAG00000007701) ENSFCAG00000052289 LRMDA (ENSFCAG00000041676) ZNF503 (ENSFCAG00000010035) ENSFCAG00000026027 #22 COMTD1 (ENSFCAG00000005086) VDAC2 (ENSFCAG00000026943) SAMD8 (ENSFCAG00000026865) DUSP13 (ENSFCAG00000036709) DUSP29 (ENSFCAG00000005553) KAT6B (ENSFCAG00000005552) ENSFCAG00000039301 ADK (ENSFCAG00000015570) AP3M1 (ENSFCAG00000000775) VCL (ENSFCAG00000015569) PLAU (ENSFCAG00000015567) CAMK2G (ENSFCAG00000018407) NDST2 (ENSFCAG00000010960) ZSWIM8 (ENSFCAG00000018535) CHCHD1 (ENSFCAG00000034312) Cat MODERN SPECIES 252 IL13RA1 (ENSFCAG00000027640) DOCK11 (ENSFCAG00000007899) WDR44 (ENSFCAG00000007898) KLHL13 (ENSFCAG00000027267) ENSFCAG00000012661 ENSFCAG00000027803 AGTR2 (ENSFCAG00000014073) PLS3 (ENSFCAG00000008706) ENSFCAG00000040943 ENSFCAG00000043650 ENSFCAG00000005959 LRCH2 (ENSFCAG00000013912) IL13RA2 (ENSFCAG00000003202) HTR2C (ENSFCAG00000038903) ENSFCAG00000046973 ENSFCAG00000014633 #22 ENSFCAG00000040139 AMOT (ENSFCAG00000012495) ENSFCAG00000030473 LHFPL1 (ENSFCAG00000012493) RTL4 (ENSFCAG00000046538) TRPC5OS (ENSFCAG00000044915) TRPC5 (ENSFCAG00000010632) ENSFCAG00000053654 ENSFCAG00000010631 SERTM2 (ENSFCAG00000041919) DCX (ENSFCAG00000004890) CAPN6 (ENSFCAG00000011507) PAK3 (ENSFCAG00000011506) CHRDL1 (ENSFCAG00000008546) RTL9 (ENSFCAG00000040955) Panthera ANCESTRAL SPECIES 33 ENSGT00940000160619 ENSGT00440000033329.b.a.b ENSGT01030000234522.C.b.e.a.b.i ENSGT00940000160896 ENSGT00940000155658 ENSGT00940000157557 ENSGT00940000154359.f ENSGT00390000018873 ENSGT00940000159688 ENSGT01050000244888.b.a.c.a ENSGT00950000183097.a.a.a ENSGT00940000160039 ENSGT00940000159971 ENSGT00940000157540.A.k.b ENSGT01050000244937.a.b.a ENSGT00440000033468.c.b #22 ENSGT00960000186788 ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00940000159922.b ENSGT00510000047493 ENSGT00950000183232 ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000160983 ENSGT00730000110943.A.d ENSGT00390000010397.a Tiger MODERN SPECIES 160 STAC3 (ENSPTIG00000008442) NDUFA4L2 (ENSPTIG00000008275) SHMT2 (ENSPTIG00000008037) ENSPTIG00000006559 STAT6 (ENSPTIG00000000983) NAB2 (ENSPTIG00000021268) NEMP1 (ENSPTIG00000021161) MYO1A (ENSPTIG00000020954) TAC3 (ENSPTIG00000020761) ZBTB39 (ENSPTIG00000006437) ENSPTIG00000020569 #20 RDH16 (ENSPTIG00000020198) SDR9C7 (ENSPTIG00000020147) HSD17B6 (ENSPTIG00000020042) #20 PRIM1 (ENSPTIG00000019991) #21 ENSPTIG00000019812 #22 PTGES3 (ENSPTIG00000019339) #23 ATP5F1B (ENSPTIG00000019256) #24 BAZ2A (ENSPTIG00000018184) #25 RBMS2 (ENSPTIG00000017925) #27 GLS2 (ENSPTIG00000017548) #28 SPRYD4 (ENSPTIG00000017452) #29 MIP (ENSPTIG00000017418) #30 ENSPTIG00000016933 ENSPTIG00000006370 STAT2 (ENSPTIG00000015130) IL23A (ENSPTIG00000015077) PAN2 (ENSPTIG00000012494) CNPY2 (ENSPTIG00000012376) CS (ENSPTIG00000012285) COQ10A (ENSPTIG00000012041) Panthera_a ANCESTRAL SPECIES 34 ENSGT00440000033329.b.a.b ENSGT01030000234522.C.b.e.a.b.i ENSGT00940000160896 ENSGT00940000155658 ENSGT00940000157557 ENSGT00940000154359.f ENSGT00390000018873 ENSGT00940000159688 ENSGT01050000244888.b.a.c.a ENSGT00950000183097.a.a.a ENSGT01020000230624.a ENSGT00940000160039 ENSGT00940000159971 ENSGT00940000157540.A.k.b ENSGT01050000244937.a.b.a ENSGT00440000033468.c.b #22 ENSGT00960000186788 ENSGT00940000159055 ENSGT00990000203589.a.b.a.b ENSGT00940000163925 ENSGT00390000018248 ENSGT01060000248594.e.a ENSGT00940000159922.b ENSGT00510000047493 ENSGT00950000183232 ENSGT00940000161570 ENSGT00940000156128.b ENSGT00950000182988.a.b.b.b ENSGT00940000160983 ENSGT00730000110943.A.d ENSGT00390000010397.a lion MODERN SPECIES 88 ENSPLOG00000021014 IL13RA1 (ENSPLOG00000021046) DOCK11 (ENSPLOG00000021192) WDR44 (ENSPLOG00000021463) KLHL13 (ENSPLOG00000021654) CT83 (ENSPLOG00000021722) SLC6A14 (ENSPLOG00000021739) AGTR2 (ENSPLOG00000021782) PLS3 (ENSPLOG00000021800) ENSPLOG00000021869 LRCH2 (ENSPLOG00000021954) ENSPLOG00000022017 IL13RA2 (ENSPLOG00000022032) HTR2C (ENSPLOG00000022042) ENSPLOG00000022069 ENSPLOG00000022079 #22 ENSPLOG00000022089 AMOT (ENSPLOG00000022107) LHFPL1 (ENSPLOG00000022139) RTL4 (ENSPLOG00000022145) TRPC5 (ENSPLOG00000022151) TRPC5OS (ENSPLOG00000014375) ENSPLOG00000014399 ENSPLOG00000014442 SERTM2 (ENSPLOG00000014493) DCX (ENSPLOG00000014518) CAPN6 (ENSPLOG00000014640) PAK3 (ENSPLOG00000014863) CHRDL1 (ENSPLOG00000015672) ENSPLOG00000016080 RTL9 (ENSPLOG00000016101) leopard MODERN SPECIES 107 PLS3 (ENSPPRG00000011821) ENSPPRG00000022198 ENSPPRG00000012859 LRCH2 (ENSPPRG00000017668) IL13RA2 (ENSPPRG00000019917) ENSPPRG00000023226 HTR2C (ENSPPRG00000000141) ENSPPRG00000022460 #22 ENSPPRG00000022472 AMOT (ENSPPRG00000001479) LHFPL1 (ENSPPRG00000002421) RTL4 (ENSPPRG00000022559) TRPC5OS (ENSPPRG00000022580) TRPC5 (ENSPPRG00000002642) ALG13 (ENSPPRG00000006304) SERTM2 (ENSPPRG00000014278) DCX (ENSPPRG00000007137) CAPN6 (ENSPPRG00000007646) PAK3 (ENSPPRG00000009671) CHRDL1 (ENSPPRG00000011933) RTL9 (ENSPPRG00000014437) AMMECR1 (ENSPPRG00000015236) TMEM164 (ENSPPRG00000018845) Atlantogenata ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Xenarthra ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Armadillo MODERN SPECIES 2301 STAC3 (ENSDNOG00000049085) NDUFA4L2 (ENSDNOG00000013585) SHMT2 (ENSDNOG00000034318) LRP1 (ENSDNOG00000025390) STAT6 (ENSDNOG00000033099) NAB2 (ENSDNOG00000033168) ENSDNOG00000009044 MYO1A (ENSDNOG00000006370) ENSDNOG00000011223 ZBTB39 (ENSDNOG00000011215) GPR182 (ENSDNOG00000011175) ENSDNOG00000025072 ENSDNOG00000034193 HSD17B6 (ENSDNOG00000015533) #20 PRIM1 (ENSDNOG00000001608) #21 ENSDNOG00000033528 #22 ENSDNOG00000011289 #24 ENSDNOG00000032543 BAZ2A (ENSDNOG00000011221) #25 RBMS2 (ENSDNOG00000011198) #27 ENSDNOG00000011157 #29 GLS2 (ENSDNOG00000011167) #28 MIP (ENSDNOG00000030726) #30 TIMELESS (ENSDNOG00000011047) ENSDNOG00000037282 STAT2 (ENSDNOG00000011002) IL23A (ENSDNOG00000034705) PAN2 (ENSDNOG00000010940) CNPY2 (ENSDNOG00000010925) ENSDNOG00000010907 COQ10A (ENSDNOG00000038641) Afrotheria ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Tenrec MODERN SPECIES 16086 ENSETEG00000015364 #22 Afrotheria_a ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Elephant MODERN SPECIES 1 ENSLAFG00000032469 MAP7 (ENSLAFG00000004444) MAP3K5 (ENSLAFG00000000588) ENSLAFG00000032335 PEX7 (ENSLAFG00000007598) SLC35D3 (ENSLAFG00000016308) ENSLAFG00000007603 IL22RA2 (ENSLAFG00000001324) IFNGR1 (ENSLAFG00000029501) OLIG3 (ENSLAFG00000005655) TNFAIP3 (ENSLAFG00000011428) PERP (ENSLAFG00000000047) ARFGEF3 (ENSLAFG00000001882) HEBP2 (ENSLAFG00000013501) NHSL1 (ENSLAFG00000022496) ENSLAFG00000032149 #22 CCDC28A (ENSLAFG00000023017) ECT2L (ENSLAFG00000011906) REPS1 (ENSLAFG00000007507) ABRACL (ENSLAFG00000022880) HECA (ENSLAFG00000005898) TXLNB (ENSLAFG00000004086) CITED2 (ENSLAFG00000006376) NMBR (ENSLAFG00000006103) GJE1 (ENSLAFG00000006107) VTA1 (ENSLAFG00000006109) ADGRG6 (ENSLAFG00000005050) HIVEP2 (ENSLAFG00000009644) ENSLAFG00000032051 AIG1 (ENSLAFG00000009672) ADAT2 (ENSLAFG00000012597) Marsupialia ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Marsupialia_b ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Diprotodontia ANCESTRAL SPECIES ENSGT00440000033468.c.b #22 Wallaby MODERN SPECIES 9632 ENSMEUG00000008412 #22 Platypus MODERN SPECIES 1 ENSOANG00000039683 STAC3 (ENSOANG00000038086) NDUFA4L2 (ENSOANG00000044477) SHMT2 (ENSOANG00000047243) ENSOANG00000051029 ENSOANG00000040423 STAT6 (ENSOANG00000049497) NAB2 (ENSOANG00000048993) NEMP1 (ENSOANG00000040767) MYO1A (ENSOANG00000044794) GPR182 (ENSOANG00000044878) ENSOANG00000043202 SDR9C7 (ENSOANG00000007123) ENSOANG00000008411 PRIM1 (ENSOANG00000008121) #21 ENSOANG00000050977 #22 PTGES3 (ENSOANG00000010129) #23 ATP5F1B (ENSOANG00000003235) #24 BAZ2A (ENSOANG00000004476) #25 RBMS2 (ENSOANG00000004477) #27 GLS2 (ENSOANG00000043788) #28 SPRYD4 (ENSOANG00000014627) #29 MIP (ENSOANG00000011653) #30 TIMELESS (ENSOANG00000012531) ENSOANG00000012739 IL23A (ENSOANG00000012738) PAN2 (ENSOANG00000005151) CNPY2 (ENSOANG00000036646) CS (ENSOANG00000031970) COQ10A (ENSOANG00000007562) ANKRD52 (ENSOANG00000041448) Amniota ANCESTRAL SPECIES 30 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 Sauria ANCESTRAL SPECIES 25 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 Archelosauria ANCESTRAL SPECIES 26 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Archosauria ANCESTRAL SPECIES 32 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Australian saltwater crocodile MODERN SPECIES 7 ENSCPRG00005004475 ENSCPRG00005004477 PDE1B (ENSCPRG00005004495) ENSCPRG00005004583 ENSCPRG00005004631 ENSCPRG00005005080 ENSCPRG00005005090 KRT80 (ENSCPRG00005005095) BCDIN3D (ENSCPRG00005005099) FAIM2 (ENSCPRG00005005106) AQP2 (ENSCPRG00005005189) AQP5 (ENSCPRG00005005196) ENSCPRG00005005216 ENSCPRG00005005227 PRIM1 (ENSCPRG00005005260) #21 ENSCPRG00005005384 ##22 PTGES3 (ENSCPRG00005005396) #23 ATP5F1B (ENSCPRG00005005401) #24 BAZ2A (ENSCPRG00005005425) #25 Aves ANCESTRAL SPECIES 37 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.c ENSGT00940000154118.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155 Neognathae ANCESTRAL SPECIES 31 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Neognathae_b ANCESTRAL SPECIES 30 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Neognathae_c ANCESTRAL SPECIES 34 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Golden eagle MODERN SPECIES 6 STAC3 (ENSACCG00020015892) NDUFA4L2 (ENSACCG00020015876) SHMT2 (ENSACCG00020015862) NXPH4 (ENSACCG00020015847) LRP1 (ENSACCG00020015781) STAT6 (ENSACCG00020015729) NAB2 (ENSACCG00020015713) NEMP1 (ENSACCG00020015693) MYO1A (ENSACCG00020015671) ENSACCG00020015645 ZBTB39 (ENSACCG00020015630) GPR182 (ENSACCG00020015617) ENSACCG00020015613 ENSACCG00020015599 PRIM1 (ENSACCG00020015585) #21 NACA (ENSACCG00020015549) ##22 PTGES3 (ENSACCG00020015514) #23 ATP5F1B (ENSACCG00020015476) #24 RBMS2 (ENSACCG00020015428) #27 MIP (ENSACCG00020015403) #30 TIMELESS (ENSACCG00020015371) ENSACCG00020015345 STAT2 (ENSACCG00020015315) ENSACCG00020015282 PAN2 (ENSACCG00020015236) ENSACCG00020015206 CS (ENSACCG00020015191) COQ10A (ENSACCG00020015178) ANKRD52 (ENSACCG00020015109) SLC39A5 (ENSACCG00020015008) NABP2 (ENSACCG00020014975) Passeriformes ANCESTRAL SPECIES 42 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d.a ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00440000033468.d ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Passeriformes_d ANCESTRAL SPECIES 33 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d.a ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155 Passeriformes_g ANCESTRAL SPECIES 32 ENSGT00940000160065 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d.a ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155 Passeroidea ANCESTRAL SPECIES 35 ENSGT00940000160065 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d.a ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155 Zebra finch MODERN SPECIES 22 INHBC (ENSTGUG00000015903) R3HDM2 (ENSTGUG00000015881) STAC3 (ENSTGUG00000020646) NDUFA4L2 (ENSTGUG00000024308) SHMT2 (ENSTGUG00000015865) NXPH4 (ENSTGUG00000021359) STAT6 (ENSTGUG00000015716) NAB2 (ENSTGUG00000024445) NEMP1 (ENSTGUG00000029403) MYO1A (ENSTGUG00000015653) ZBTB39 (ENSTGUG00000028597) GPR182 (ENSTGUG00000015646) ENSTGUG00000019140 ENSTGUG00000015636 PRIM1 (ENSTGUG00000014616) #21 ENSTGUG00000015631 ##22 PTGES3 (ENSTGUG00000028263) #23 ATP5F1B (ENSTGUG00000015620) #24 BAZ2A (ENSTGUG00000022334) #25 ENSTGUG00000019418 #27 ENSTGUG00000019692 #30 ENSTGUG00000029018 ENSTGUG00000023554 ENSTGUG00000020708 ENSTGUG00000024359 ENSTGUG00000025066 ENSTGUG00000023442 ENSTGUG00000019109 ENSTGUG00000022936 ENSTGUG00000028882 ENSTGUG00000023260 Galloanserae ANCESTRAL SPECIES 98 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 Phasianidae ANCESTRAL SPECIES 72 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 Phasianidae_b ANCESTRAL SPECIES 35 ENSGT00940000155637 ENSGT00940000160235 ENSGT00940000160065 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155.c ENSGT00940000161079 Chicken MODERN SPECIES 27 INHBC (ENSGALG00010025533) R3HDM2 (ENSGALG00010025506) STAC3 (ENSGALG00010025499) LRP1 (ENSGALG00010025368) STAT6 (ENSGALG00010025355) NAB2 (ENSGALG00010025343) NEMP1 (ENSGALG00010025337) MYO1A (ENSGALG00010025329) ENSGALG00010025311 GPR182 (ENSGALG00010025305) ENSGALG00010025283 ZBTB39 (ENSGALG00010025268) ENSGALG00010025956 ENSGALG00010025236 PRIM1 (ENSGALG00010025232) #21 NACA (ENSGALG00010025219) ##22 PTGES3 (ENSGALG00010025167) #23 ATP5B (ENSGALG00010025098) #24 BAZ2A (ENSGALG00010025080) #25 RBMS2 (ENSGALG00010025056) #27 ENSGALG00010025030 MIP (ENSGALG00010025019) #30 TIMELESS (ENSGALG00010024989) ENSGALG00010024983 STAT2 (ENSGALG00010024965) ENSGALG00010024954 PAN2 (ENSGALG00010024949) ENSGALG00010024944 CS (ENSGALG00010024933) COQ10A (ENSGALG00010024939) ANKRD52 (ENSGALG00010024919) Cryptodira ANCESTRAL SPECIES 25 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Chinese turtle MODERN SPECIES 1705 ENSPSIG00000003355 ENSPSIG00000003352 PRIM1 (ENSPSIG00000003343) #21 ENSPSIG00000003335 ##22 PTGES3 (ENSPSIG00000003333) #23 ATP5F1B (ENSPSIG00000003329) #24 ENSPSIG00000003327 #25 SPRYD4 (ENSPSIG00000000828) #29 MIP (ENSPSIG00000003323) #30 TIMELESS (ENSPSIG00000003292) PAN2 (ENSPSIG00000003267) ENSPSIG00000003265 CS (ENSPSIG00000003243) COQ10A (ENSPSIG00000003240) ANKRD52 (ENSPSIG00000003197) NABP2 (ENSPSIG00000003187) RNF41 (ENSPSIG00000003175) SMARCC2 (ENSPSIG00000003139) MYL6 (ENSPSIG00000003136) Testudinoidea ANCESTRAL SPECIES 21 ENSGT00940000161040 ENSGT00390000002762.a.a.d ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Testudinidae ANCESTRAL SPECIES 25 ENSGT00950000183092.a ENSGT00390000002762.a.a.d ENSGT00950000182883.b.a.b ENSGT00940000157899.b.a ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Abingdon island giant tortoise MODERN SPECIES 1111 ENSCABG00000004652 ENSCABG00000004653 ENSCABG00000004655 ENSCABG00000004658 STAT6 (ENSCABG00000004685) NAB2 (ENSCABG00000005187) NEMP1 (ENSCABG00000005194) MYO1A (ENSCABG00000005283) TAC3 (ENSCABG00000005361) ZBTB39 (ENSCABG00000005364) GPR182 (ENSCABG00000005367) ENSCABG00000005371 ENSCABG00000005438 ENSCABG00000005447 PRIM1 (ENSCABG00000005476) #21 ENSCABG00000005477 ##22 PTGES3 (ENSCABG00000005479) #23 ATP5F1B (ENSCABG00000005480) #24 BAZ2A (ENSCABG00000005491) #25 RBMS2 (ENSCABG00000005725) #27 SPRYD4 (ENSCABG00000005856) #29 MIP (ENSCABG00000005862) #30 TIMELESS (ENSCABG00000005900) ENSCABG00000005905 STAT2 (ENSCABG00000005909) PAN2 (ENSCABG00000005914) ENSCABG00000006007 CS (ENSCABG00000006009) COQ10A (ENSCABG00000006012) ANKRD52 (ENSCABG00000006014) SLC39A5 (ENSCABG00000006018) Goode s thornscrub tortoise MODERN SPECIES 17 SHMT2 (ENSGEVG00005000136) NXPH4 (ENSGEVG00005000164) LRP1 (ENSGEVG00005000600) STAT6 (ENSGEVG00005001199) ENSGEVG00005001231 NAB2 (ENSGEVG00005001257) NEMP1 (ENSGEVG00005001310) MYO1A (ENSGEVG00005001425) ZBTB39 (ENSGEVG00005001731) GPR182 (ENSGEVG00005001736) ENSGEVG00005001785 ENSGEVG00005001876 ENSGEVG00005001912 ENSGEVG00005001937 PRIM1 (ENSGEVG00005001967) #21 ENSGEVG00005002019 ##22 PTGES3 (ENSGEVG00005002066) #23 ATP5F1B (ENSGEVG00005002094) #24 BAZ2A (ENSGEVG00005002255) #25 RBMS2 (ENSGEVG00005002677) #27 SPRYD4 (ENSGEVG00005002694) #29 ENSGEVG00005002712 MIP (ENSGEVG00005002732) #30 TIMELESS (ENSGEVG00005002758) ENSGEVG00005002798 STAT2 (ENSGEVG00005002819) PAN2 (ENSGEVG00005002917) ENSGEVG00005002956 CS (ENSGEVG00005002985) ENSGEVG00005003023 COQ10A (ENSGEVG00005003085) Emydidae ANCESTRAL SPECIES 49 ENSGT00940000161040 ENSGT00390000002762.a.a.d ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b ENSGT00940000154118.a.a.b.a.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.e ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155 Three-toed box turtle MODERN SPECIES 299 ENSTMTG00000010684 R3HDM2 (ENSTMTG00000010799) STAC3 (ENSTMTG00000011599) ENSTMTG00000011666 LRP1 (ENSTMTG00000011913) STAT6 (ENSTMTG00000014562) NAB2 (ENSTMTG00000014612) NEMP1 (ENSTMTG00000014657) ENSTMTG00000014950 ZBTB39 (ENSTMTG00000014988) GPR182 (ENSTMTG00000014991) ENSTMTG00000014995 ENSTMTG00000015015 PRIM1 (ENSTMTG00000015030) #21 ENSTMTG00000015051 ##22 PTGES3 (ENSTMTG00000015117) #23 painted turtle MODERN SPECIES 973 ENSCPBG00000014208 ENSCPBG00000014203 PRIM1 (ENSCPBG00000014198) #21 ENSCPBG00000014194 ##22 PTGES3 (ENSCPBG00000014188) #23 ENSCPBG00000014182 #24 ENSCPBG00000014180 #25 ENSCPBG00000014178 #25 RBMS2 (ENSCPBG00000014176) #27 SPRYD4 (ENSCPBG00000014175) #29 MIP (ENSCPBG00000014124) #30 TIMELESS (ENSCPBG00000014064) ENSCPBG00000014040 ENSCPBG00000014036 PAN2 (ENSCPBG00000014029) ENSCPBG00000014023 CS (ENSCPBG00000013780) COQ10A (ENSCPBG00000013774) ENSCPBG00000013773 Lepidosauria ANCESTRAL SPECIES 131 ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000154118.a.a.b.a.a ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156037.b ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000013978.d Episquamata ANCESTRAL SPECIES 4 ENSGT00940000155862.a.a.a.a.b.a.b.a.a ENSGT00940000155862.a.a.a.a.b.a.b.a.b ENSGT00940000155862.a.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.a.b ENSGT00940000155862.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.b ENSGT00940000155862.a.a.a.a.b.b ENSGT00940000155862.a.a.a.a.a ENSGT00940000154307.D ENSGT00940000160722 ENSGT00390000000335 ENSGT00940000154118.a.a.a.a.b ENSGT00940000154118.a.a.a.a.a ENSGT00940000154118.a.a.a.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00390000010523.d ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544 ENSGT00390000010327 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 Toxicofera ANCESTRAL SPECIES 19 ENSGT00940000155862.a.a.a.a.b.a.b.a.a ENSGT00940000155862.a.a.a.a.b.a.b.a.b ENSGT00940000155862.a.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.a.b ENSGT00940000155862.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.b ENSGT00940000155862.a.a.a.a.b.b ENSGT00940000155862.a.a.a.a.a ENSGT00940000154307.D ENSGT00940000160722 ENSGT00390000000335 ENSGT00940000154118.a.a.a.a.b ENSGT00940000154118.a.a.a.a.a ENSGT00940000154118.a.a.a.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00390000010523.d ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544 ENSGT00390000010327 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 Elapidae ANCESTRAL SPECIES 2 ENSGT00940000155862.a.a.a.a.b.a.b.a.b ENSGT00940000155862.a.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.a.b ENSGT00940000155862.a.a.a.b.a.a.b ENSGT00940000155862.a.a.a.b.a.a.a ENSGT00940000155862.a.a.a.a.b.b ENSGT00940000155862.a.a.a.a.a ENSGT00940000154307.D ENSGT00940000160722 ENSGT00390000000335 ENSGT00940000154118.a.a.a.a.b ENSGT00940000154118.a.a.a.a.a.c ENSGT00940000154118.a.a.a.a.a.d.a.a ENSGT00940000154118.a.a.a.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00390000010523.d ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544 ENSGT00390000010327 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 Indian cobra MODERN SPECIES 1 ENSNNAG00000007269 ENSNNAG00000007351 KRT4 (ENSNNAG00000007380) ENSNNAG00000007451 ENSNNAG00000007521 ENSNNAG00000008011 ENSNNAG00000008103 ENSNNAG00000008129 GPR182 (ENSNNAG00000008146) ZBTB39 (ENSNNAG00000008163) ENSNNAG00000008192 ENSNNAG00000008376 ENSNNAG00000008506 ENSNNAG00000008689 PRIM1 (ENSNNAG00000008835) #21 NACA (ENSNNAG00000008952) ##22 PTGES3 (ENSNNAG00000009137) #23 ENSNNAG00000009163 PRPF40B (ENSNNAG00000009183) FMNL3 (ENSNNAG00000009336) TMBIM6 (ENSNNAG00000010618) NCKAP5L (ENSNNAG00000010637) KANSL2 (ENSNNAG00000010712) CCNT1 (ENSNNAG00000010829) ADCY6 (ENSNNAG00000010911) ENSNNAG00000011638 CACNB3 (ENSNNAG00000011651) DDX23 (ENSNNAG00000011713) RND1 (ENSNNAG00000011770) CCDC65 (ENSNNAG00000011803) FKBP11 (ENSNNAG00000011832) Elapidae_a ANCESTRAL SPECIES 54 ENSGT00940000155862.a.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.a.b ENSGT00940000155862.a.a.a.b.a.a.b ENSGT00940000155862.a.a.a.b.a.a.a ENSGT00940000155862.a.a.a.a.b.b ENSGT00940000155862.a.a.a.a.a ENSGT00940000154307.D ENSGT00940000160722 ENSGT00390000000335 ENSGT00940000154118.a.a.a.a.b ENSGT00940000154118.a.a.a.a.a.c ENSGT00940000154118.a.a.a.a.a.d.a.a ENSGT00940000154118.a.a.a.a.a.d.a.b ENSGT00940000154118.a.a.a.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00390000010523.d ENSGT00950000185385 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544 ENSGT00390000010327 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B Acanthophiinae ANCESTRAL SPECIES 53 ENSGT00940000155862.a.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.a.b ENSGT00940000155862.a.a.a.b.a.a.b ENSGT00940000155862.a.a.a.b.a.a.a ENSGT00940000155862.a.a.a.a.b.b ENSGT00940000155862.a.a.a.a.a ENSGT00940000154307.D ENSGT00940000160722 ENSGT00390000000335 ENSGT00940000154118.a.a.a.a.b ENSGT00940000154118.a.a.a.a.a.c ENSGT00940000154118.a.a.a.a.a.d.a.a ENSGT00940000154118.a.a.a.a.a.d.a.b ENSGT00940000154118.a.a.a.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00390000010523.d ENSGT00950000185385 ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 Eastern brown snake MODERN SPECIES 72 ENSPTXG00000013152 ENSPTXG00000013350 ENSPTXG00000013352 ENSPTXG00000013354 ENSPTXG00000013437 GPR182 (ENSPTXG00000013441) ZBTB39 (ENSPTXG00000013442) TAC3 (ENSPTXG00000013446) ENSPTXG00000013447 ENSPTXG00000013449 ENSPTXG00000013453 ENSPTXG00000013457 ENSPTXG00000013513 ENSPTXG00000013514 PRIM1 (ENSPTXG00000013516) #21 NACA (ENSPTXG00000006235) ##22 PTGES3 (ENSPTXG00000006236) #23 ENSPTXG00000006237 PRPF40B (ENSPTXG00000006240) FMNL3 (ENSPTXG00000006243) TMBIM6 (ENSPTXG00000006878) NCKAP5L (ENSPTXG00000006880) KANSL2 (ENSPTXG00000006881) CCNT1 (ENSPTXG00000006884) ADCY6 (ENSPTXG00000006885) CACNB3 (ENSPTXG00000006887) DDX23 (ENSPTXG00000006889) RND1 (ENSPTXG00000006892) CCDC65 (ENSPTXG00000006894) FKBP11 (ENSPTXG00000006956) ARF3 (ENSPTXG00000006957) Blue-lipped sea krait MODERN SPECIES 5465 PRIM1 (ENSLLTG00000016034) #21 ENSLLTG00000016041 ##22 Laterata ANCESTRAL SPECIES 1 ENSGT00940000155862.a.a.a.a.b.a.b.a.a ENSGT00940000162738.j.a.a.a ENSGT00940000155862.a.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.a.b ENSGT00940000155862.a.a.a.b.a.a ENSGT00940000155862.a.a.a.b.b ENSGT00940000155862.a.a.a.a.b.b ENSGT00940000155862.a.a.a.a.a ENSGT00940000154307.D ENSGT00940000160722 ENSGT00390000000335 ENSGT00940000154118.a.a.a.a.b ENSGT00940000154118.a.a.a.a.a.b ENSGT00940000154118.a.a.a.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00390000010523.d ENSGT00930000150980.b ENSGT00940000159962 ENSGT01050000244940.a.a ENSGT00530000063607.a ENSGT00940000155808 ENSGT00940000159544 ENSGT00390000010327 ENSGT00940000155687 ENSGT00950000182837.b.a ENSGT00940000155606.b ENSGT00940000158666 ENSGT00940000153804.B ENSGT00940000159521 Argentine black and white tegu MODERN SPECIES 18 ENSSMRG00000009233 ENSSMRG00000009236 ENSSMRG00000009237 ENSSMRG00000009238 ENSSMRG00000009239 ENSSMRG00000009240 ENSSMRG00000009246 GPR182 (ENSSMRG00000009256) ZBTB39 (ENSSMRG00000009257) TAC3 (ENSSMRG00000009259) ENSSMRG00000009271 ENSSMRG00000009270 ENSSMRG00000009272 ENSSMRG00000009273 PRIM1 (ENSSMRG00000009274) #21 NACA (ENSSMRG00000009276) ##22 PTGES3 (ENSSMRG00000009278) #23 ENSSMRG00000009279 ENSSMRG00000009281 PRPF40B (ENSSMRG00000009282) FMNL3 (ENSSMRG00000009293) TMBIM6 (ENSSMRG00000011940) ENSSMRG00000011943 NCKAP5L (ENSSMRG00000011944) KANSL2 (ENSSMRG00000011945) CCNT1 (ENSSMRG00000011948) TEX49 (ENSSMRG00000011949) ADCY6 (ENSSMRG00000011989) CACNB3 (ENSSMRG00000012001) DDX23 (ENSSMRG00000012008) RND1 (ENSSMRG00000012016) Mammalia ANCESTRAL SPECIES 31 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000161764 ENSGT00940000154118.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00940000164642 ENSGT00390000006813 Theria ANCESTRAL SPECIES 2 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 Eutheria ANCESTRAL SPECIES 1 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Atlantogenata ANCESTRAL SPECIES 16 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Xenarthra ANCESTRAL SPECIES 12 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000159780 #29 ENSGT00390000010463.a.a.a #28 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B Sloth MODERN SPECIES 7162 ENSCHOG00000006654 #21 ENSCHOG00000006648 ##22 Afrotheria ANCESTRAL SPECIES 8 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Afrotheria_a ANCESTRAL SPECIES 8 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Elephant MODERN SPECIES 196 NDUFA4L2 (ENSLAFG00000021950) SHMT2 (ENSLAFG00000011532) NXPH4 (ENSLAFG00000011528) LRP1 (ENSLAFG00000005976) STAT6 (ENSLAFG00000005970) NAB2 (ENSLAFG00000032283) NEMP1 (ENSLAFG00000017999) MYO1A (ENSLAFG00000017988) ENSLAFG00000017982 ZBTB39 (ENSLAFG00000004913) GPR182 (ENSLAFG00000004909) RDH16 (ENSLAFG00000017862) SDR9C7 (ENSLAFG00000017871) HSD17B6 (ENSLAFG00000012770) #20 PRIM1 (ENSLAFG00000004602) #21 ENSLAFG00000004598 ##22 PTGES3 (ENSLAFG00000008268) #23 ATP5F1B (ENSLAFG00000028428) #24 BAZ2A (ENSLAFG00000008255) #25 RBMS2 (ENSLAFG00000008251) #27 GLS2 (ENSLAFG00000002237) #28 SPRYD4 (ENSLAFG00000002235) #29 MIP (ENSLAFG00000032685) #30 TIMELESS (ENSLAFG00000004742) ENSLAFG00000026784 STAT2 (ENSLAFG00000014890) IL23A (ENSLAFG00000014886) PAN2 (ENSLAFG00000014873) CNPY2 (ENSLAFG00000014867) CS (ENSLAFG00000014860) COQ10A (ENSLAFG00000014858) Tenrec DUPLICATION Tenrec MODERN SPECIES 12719 ENSETEG00000000251 ##22 Tenrec MODERN SPECIES 10808 ENSETEG00000003599 ##22 Boreoeutheria ANCESTRAL SPECIES 6 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00940000154118.b ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000162028 #20 ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Eulipotyphla ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Hedgehog MODERN SPECIES 8101 ENSEEUG00000010458 ##22 Laurasiatheria_a ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000161764 ENSGT00940000162028.a.b #20 ENSGT00940000154118.b ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Laurasiatheria_b ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000162028.a.b #20 ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Laurasiatheria_c ANCESTRAL SPECIES 5 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.vb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00940000154118.b.vb.b ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.wb ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Equus ANCESTRAL SPECIES 43 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.vb.b.a.a ENSGT00940000154118.b.vb.a ENSGT00940000161764 ENSGT00940000154118.b.wb ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Horse MODERN SPECIES 27 MYO1A (ENSECAG00000021228) ENSECAG00000035776 ZBTB39 (ENSECAG00000006101) GPR182 (ENSECAG00000049899) ENSECAG00000048525 ENSECAG00000028933 ENSECAG00000038236 SDR9C7 (ENSECAG00000018703) ENSECAG00000029773 ENSECAG00000031430 ENSECAG00000051324 ENSECAG00000036993 ENSECAG00000050633 #21 HSD17B6 (ENSECAG00000016761) #20 ENSECAG00000015297 #21 ENSECAG00000015242 ##22 PTGES3 (ENSECAG00000013127) #23 ATP5F1B (ENSECAG00000022627) #24 BAZ2A (ENSECAG00000018243) #25 RBMS2 (ENSECAG00000013470) #27 GLS2 (ENSECAG00000008933) #28 SPRYD4 (ENSECAG00000008889) #29 MIP (ENSECAG00000008856) #30 TIMELESS (ENSECAG00000002892) STAT2 (ENSECAG00000022326) IL23A (ENSECAG00000022310) PAN2 (ENSECAG00000019814) CNPY2 (ENSECAG00000019676) CS (ENSECAG00000016568) COQ10A (ENSECAG00000015874) ANKRD52 (ENSECAG00000009511) Donkey MODERN SPECIES 1 ENSEASG00005025268 C5orf22 (ENSEASG00005007146) DROSHA (ENSEASG00005007149) ENSEASG00005035698 CDH6 (ENSEASG00005007155) ENSEASG00005023693 CDH9 (ENSEASG00005007157) CDH10 (ENSEASG00005007161) CDH12 (ENSEASG00005007168) CDH18 (ENSEASG00005007180) ENSEASG00005007184 BASP1 (ENSEASG00005026829) MYO10 (ENSEASG00005007206) RETREG1 (ENSEASG00005029345) ZNF622 (ENSEASG00005007253) ENSEASG00005033563 ##22 MARCHF11 (ENSEASG00005038351) FBXL7 (ENSEASG00005038620) ANKH (ENSEASG00005017738) OTULIN (ENSEASG00005017769) OTULINL (ENSEASG00005017778) TRIO (ENSEASG00005017933) DNAH5 (ENSEASG00005018225) CTNND2 (ENSEASG00005018602) DAP (ENSEASG00005037402) ANKRD33B (ENSEASG00005033374) ROPN1L (ENSEASG00005018599) MARCHF6 (ENSEASG00005018598) CMBL (ENSEASG00005018596) CCT5 (ENSEASG00005018595) ATPSCKMT (ENSEASG00005018594) Chiroptera ANCESTRAL SPECIES 4 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.vb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Megabat MODERN SPECIES 4526 PRIM1 (ENSPVAG00000008017) #21 ENSPVAG00000008015 ##22 Microchiroptera ANCESTRAL SPECIES 2 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.vb.a ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Microbat MODERN SPECIES 1056 NDUFA4L2 (ENSMLUG00000004963) SHMT2 (ENSMLUG00000004955) ENSMLUG00000006731 ENSMLUG00000030361 STAT6 (ENSMLUG00000006689) NAB2 (ENSMLUG00000006662) NEMP1 (ENSMLUG00000000419) MYO1A (ENSMLUG00000000404) ZBTB39 (ENSMLUG00000000390) GPR182 (ENSMLUG00000024401) ENSMLUG00000023673 ENSMLUG00000027072 ENSMLUG00000000374 SDR9C7 (ENSMLUG00000011015) PRIM1 (ENSMLUG00000016776) #21 ENSMLUG00000001169 ##22 PTGES3 (ENSMLUG00000015927) #23 ATP5F1B (ENSMLUG00000016195) #24 ENSMLUG00000000546 #25 ENSMLUG00000026475 #25 RBMS2 (ENSMLUG00000000530) #27 ENSMLUG00000024707 GLS2 (ENSMLUG00000006854) #28 SPRYD4 (ENSMLUG00000006850) #29 ENSMLUG00000008153 MIP (ENSMLUG00000006844) #30 TIMELESS (ENSMLUG00000006822) APOF (ENSMLUG00000006814) STAT2 (ENSMLUG00000006785) IL23A (ENSMLUG00000006778) ENSMLUG00000029293 Carnivora ANCESTRAL SPECIES 3 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Caniformia ANCESTRAL SPECIES 20 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Caniformia_b ANCESTRAL SPECIES 18 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Mustelinae ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Ferret MODERN SPECIES 407 ENSMPUG00000017976 FGF20 (ENSMPUG00000017975) MICU3 (ENSMPUG00000017974) ZDHHC2 (ENSMPUG00000017973) CNOT7 (ENSMPUG00000017972) VPS37A (ENSMPUG00000017971) MTMR7 (ENSMPUG00000017970) ENSMPUG00000017969 SLC7A2 (ENSMPUG00000017968) PDGFRL (ENSMPUG00000017967) MTUS1 (ENSMPUG00000017966) FGL1 (ENSMPUG00000017965) PCM1 (ENSMPUG00000017964) ASAH1 (ENSMPUG00000017963) FRG1 (ENSMPUG00000017962) ENSMPUG00000017960 ##22 Ursidae ANCESTRAL SPECIES 13 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 6 NDUFA4L2 (ENSAMEG00000004785) SHMT2 (ENSAMEG00000004736) NXPH4 (ENSAMEG00000026081) LRP1 (ENSAMEG00000004561) STAT6 (ENSAMEG00000004487) NAB2 (ENSAMEG00000004458) NEMP1 (ENSAMEG00000004429) MYO1A (ENSAMEG00000004303) ENSAMEG00000004296 ZBTB39 (ENSAMEG00000019393) GPR182 (ENSAMEG00000019381) RDH16 (ENSAMEG00000004269) SDR9C7 (ENSAMEG00000004266) HSD17B6 (ENSAMEG00000004236) #20 PRIM1 (ENSAMEG00000004198) #21 NACA (ENSAMEG00000026887) ##22 ATP5F1B (ENSAMEG00000004135) #24 BAZ2A (ENSAMEG00000004115) #25 RBMS2 (ENSAMEG00000004054) #27 GLS2 (ENSAMEG00000004014) #28 SPRYD4 (ENSAMEG00000004011) #29 MIP (ENSAMEG00000003992) #30 TIMELESS (ENSAMEG00000003946) ENSAMEG00000003941 STAT2 (ENSAMEG00000003886) IL23A (ENSAMEG00000026605) PAN2 (ENSAMEG00000003824) CNPY2 (ENSAMEG00000003822) CS (ENSAMEG00000003774) COQ10A (ENSAMEG00000003762) ANKRD52 (ENSAMEG00000003658) Giant Panda DUPLICATION Giant Panda DUPLICATION Giant Panda MODERN SPECIES 1535 ENSAMEG00000030225 ##22 Giant Panda MODERN SPECIES 834 ENSAMEG00000028436 ##22 Giant Panda MODERN SPECIES 1521 ENSAMEG00000025408 ##22 Ursus ANCESTRAL SPECIES 23 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Polar bear MODERN SPECIES 113 R3HDM2 (ENSUMAG00000019179) STAC3 (ENSUMAG00000019103) NDUFA4L2 (ENSUMAG00000019098) SHMT2 (ENSUMAG00000019095) LRP1 (ENSUMAG00000018098) STAT6 (ENSUMAG00000017856) NAB2 (ENSUMAG00000017844) NEMP1 (ENSUMAG00000017823) MYO1A (ENSUMAG00000017779) TAC3 (ENSUMAG00000017770) ZBTB39 (ENSUMAG00000017768) RDH16 (ENSUMAG00000017762) ENSUMAG00000017756 #20 PRIM1 (ENSUMAG00000017750) #21 HSD17B6 (ENSUMAG00000017746) #20 ENSUMAG00000017739 ##22 PTGES3 (ENSUMAG00000017733) #23 ATP5F1B (ENSUMAG00000017709) #24 BAZ2A (ENSUMAG00000017488) #25 RBMS2 (ENSUMAG00000017426) #27 GLS2 (ENSUMAG00000017313) #28 SPRYD4 (ENSUMAG00000017278) #29 MIP (ENSUMAG00000017267) #30 TIMELESS (ENSUMAG00000017082) APOF (ENSUMAG00000017052) STAT2 (ENSUMAG00000017043) IL23A (ENSUMAG00000017034) PAN2 (ENSUMAG00000017020) CNPY2 (ENSUMAG00000017016) CS (ENSUMAG00000016853) COQ10A (ENSUMAG00000016840) American black bear MODERN SPECIES 507 PRIM1 (ENSUAMG00000021739) #21 HSD17B6 (ENSUAMG00000021738) #20 ENSUAMG00000021735 ##22 PTGES3 (ENSUAMG00000021731) #23 ATP5F1B (ENSUAMG00000021725) #24 BAZ2A (ENSUAMG00000021587) #25 RBMS2 (ENSUAMG00000021435) #27 Canidae ANCESTRAL SPECIES 44 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT01050000245459 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Canis_lupus ANCESTRAL SPECIES 40 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000018018.ib.a ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000164082 ENSGT00940000156260 #30 ENSGT01050000245459 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Dog MODERN SPECIES 35 NPC1 (ENSCAFG00845014901) LAMA3 (ENSCAFG00845013821) TTC39C (ENSCAFG00845013441) CABYR (ENSCAFG00845013397) OSBPL1A (ENSCAFG00845013281) IMPACT (ENSCAFG00845013207) HRH4 (ENSCAFG00845013170) ZNF521 (ENSCAFG00845013072) SS18 (ENSCAFG00845012949) PSMA8 (ENSCAFG00845012864) TAF4B (ENSCAFG00845012684) KCTD1 (ENSCAFG00845012599) AQP4 (ENSCAFG00845012372) CHST9 (ENSCAFG00845012262) CDH2 (ENSCAFG00845012116) NACA (ENSCAFG00845012021) ##22 ENSCAFG00845011983 ENSCAFG00845011961 ENSCAFG00845011726 DSC1 (ENSCAFG00845011207) DSG1 (ENSCAFG00845011100) DSG4 (ENSCAFG00845011015) DSG3 (ENSCAFG00845010787) DSG3 (ENSCAFG00845010678) TTR (ENSCAFG00845010593) B4GALT6 (ENSCAFG00845010375) TRAPPC8 (ENSCAFG00845010099) RNF125 (ENSCAFG00845010018) RNF138 (ENSCAFG00845009916) MEP1B (ENSCAFG00845009736) GAREM1 (ENSCAFG00845009634) Dingo MODERN SPECIES 374 NDUFA4L2 (ENSCAFG00020023921) SHMT2 (ENSCAFG00020023922) NXPH4 (ENSCAFG00020023924) LRP1 (ENSCAFG00020023946) STAT6 (ENSCAFG00020024215) NAB2 (ENSCAFG00020024217) NEMP1 (ENSCAFG00020024218) MYO1A (ENSCAFG00020024230) TAC3 (ENSCAFG00020024234) ZBTB39 (ENSCAFG00020024236) GPR182 (ENSCAFG00020024237) RDH16 (ENSCAFG00020024238) SDR9C7 (ENSCAFG00020024239) HSD17B6 (ENSCAFG00020024242) #20 PRIM1 (ENSCAFG00020024246) #21 ENSCAFG00020024247 ##22 PTGES3 (ENSCAFG00020024254) #23 ATP5F1B (ENSCAFG00020024257) #24 BAZ2A (ENSCAFG00020024281) #25 RBMS2 (ENSCAFG00020024460) #27 ENSCAFG00020024463 GLS2 (ENSCAFG00020024477) #28 SPRYD4 (ENSCAFG00020024734) #29 ENSCAFG00020024736 MIP (ENSCAFG00020024739) #30 ENSCAFG00020024754 STAT2 (ENSCAFG00020024840) IL23A (ENSCAFG00020024855) PAN2 (ENSCAFG00020024865) CNPY2 (ENSCAFG00020024900) CS (ENSCAFG00020024902) Felidae ANCESTRAL SPECIES 2 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Panthera ANCESTRAL SPECIES ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT01050000245459 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Panthera_a ANCESTRAL SPECIES 12 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT01050000245459 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 leopard MODERN SPECIES 27 NDUFA4L2 (ENSPPRG00000010214) SHMT2 (ENSPPRG00000013185) NXPH4 (ENSPPRG00000013279) LRP1 (ENSPPRG00000002876) STAT6 (ENSPPRG00000006529) NAB2 (ENSPPRG00000007034) NEMP1 (ENSPPRG00000008388) MYO1A (ENSPPRG00000010635) TAC3 (ENSPPRG00000011571) ZBTB39 (ENSPPRG00000019325) ENSPPRG00000012314 #20 RDH16 (ENSPPRG00000012691) SDR9C7 (ENSPPRG00000012977) HSD17B6 (ENSPPRG00000014390) #20 PRIM1 (ENSPPRG00000015766) #21 ENSPPRG00000017562 ##22 ENSPPRG00000023429 #23 ATP5F1B (ENSPPRG00000022752) #24 BAZ2A (ENSPPRG00000006678) #25 RBMS2 (ENSPPRG00000007678) #27 GLS2 (ENSPPRG00000008872) #28 SPRYD4 (ENSPPRG00000009022) #29 MIP (ENSPPRG00000009463) #30 ENSPPRG00000011001 STAT2 (ENSPPRG00000017893) IL23A (ENSPPRG00000018623) PAN2 (ENSPPRG00000021586) CNPY2 (ENSPPRG00000022430) CS (ENSPPRG00000024058) COQ10A (ENSPPRG00000023240) ANKRD52 (ENSPPRG00000022768) lion MODERN SPECIES 7 STAC3 (ENSPLOG00000013483) NDUFA4L2 (ENSPLOG00000013393) SHMT2 (ENSPLOG00000013189) NXPH4 (ENSPLOG00000013138) LRP1 (ENSPLOG00000012269) STAT6 (ENSPLOG00000012048) NAB2 (ENSPLOG00000011892) MYO1A (ENSPLOG00000011602) TAC3 (ENSPLOG00000011494) ZBTB39 (ENSPLOG00000011459) GPR182 (ENSPLOG00000011406) SDR9C7 (ENSPLOG00000011361) HSD17B6 (ENSPLOG00000011332) #20 PRIM1 (ENSPLOG00000011287) #21 ENSPLOG00000011263 ENSPLOG00000011177 ##22 PTGES3 (ENSPLOG00000011000) #23 ATP5F1B (ENSPLOG00000010913) #24 BAZ2A (ENSPLOG00000010410) #25 RBMS2 (ENSPLOG00000010209) #27 GLS2 (ENSPLOG00000010015) #28 SPRYD4 (ENSPLOG00000009958) #29 MIP (ENSPLOG00000009925) #30 TIMELESS (ENSPLOG00000009704) ENSPLOG00000009664 APOF (ENSPLOG00000009651) STAT2 (ENSPLOG00000009589) IL23A (ENSPLOG00000009557) PAN2 (ENSPLOG00000009514) CNPY2 (ENSPLOG00000009487) CS (ENSPLOG00000009410) Cat MODERN SPECIES 238 NDUFA4L2 (ENSFCAG00000000189) SHMT2 (ENSFCAG00000000188) NXPH4 (ENSFCAG00000045731) LRP1 (ENSFCAG00000000185) STAT6 (ENSFCAG00000014571) NAB2 (ENSFCAG00000022519) NEMP1 (ENSFCAG00000024952) MYO1A (ENSFCAG00000014568) TAC3 (ENSFCAG00000014566) ZBTB39 (ENSFCAG00000005613) GPR182 (ENSFCAG00000045279) RDH16 (ENSFCAG00000014562) SDR9C7 (ENSFCAG00000032766) HSD17B6 (ENSFCAG00000000899) #20 PRIM1 (ENSFCAG00000006964) #21 ENSFCAG00000038588 ##22 ENSFCAG00000048175 PTGES3 (ENSFCAG00000006110) #23 ATP5F1B (ENSFCAG00000012030) #24 BAZ2A (ENSFCAG00000012029) #25 RBMS2 (ENSFCAG00000012028) #27 GLS2 (ENSFCAG00000012027) #28 SPRYD4 (ENSFCAG00000023005) #29 MIP (ENSFCAG00000012025) #30 TIMELESS (ENSFCAG00000012024) APOF (ENSFCAG00000028837) STAT2 (ENSFCAG00000012023) IL23A (ENSFCAG00000012022) PAN2 (ENSFCAG00000012021) CNPY2 (ENSFCAG00000012020) CS (ENSFCAG00000012019) Artiodactyla ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000161764 ENSGT00940000162028.a.a #20 ENSGT00940000154118.b ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Suina ANCESTRAL SPECIES 4 ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000162028.a.a #20 ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.u #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Chacoan peccary MODERN SPECIES 900 ENSCWAG00000003947 ENSCWAG00000003974 #20 SDR9C7 (ENSCWAG00000003991) HSD17B6 (ENSCWAG00000004028) #20 PRIM1 (ENSCWAG00000004065) #21 ENSCWAG00000004123 ##22 PTGES3 (ENSCWAG00000004197) #23 ENSCWAG00000004335 #24 BAZ2A (ENSCWAG00000004421) #25 RBMS2 (ENSCWAG00000004720) #27 GLS2 (ENSCWAG00000004785) #28 SPRYD4 (ENSCWAG00000004942) #29 MIP (ENSCWAG00000004953) #30 TIMELESS (ENSCWAG00000004988) ENSCWAG00000005148 APOF (ENSCWAG00000005160) STAT2 (ENSCWAG00000005182) IL23A (ENSCWAG00000005239) PAN2 (ENSCWAG00000005280) CNPY2 (ENSCWAG00000005326) CS (ENSCWAG00000005353) Artiodactyla_a ANCESTRAL SPECIES 5 ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000162028.a.b #20 ENSGT00940000154118.b ENSGT00940000162028.a.a #20 ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Camelidae ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Alpaca MODERN SPECIES 3297 ENSVPAG00000002895 HYDIN (ENSVPAG00000002897) CMTR2 (ENSVPAG00000002903) CALB2 (ENSVPAG00000002904) ZNF19 (ENSVPAG00000002906) ENSVPAG00000002907 ##22 TAT (ENSVPAG00000002908) ENSVPAG00000002909 PHLPP2 (ENSVPAG00000002910) AP1G1 (ENSVPAG00000002912) ZNF821 (ENSVPAG00000002914) IST1 (ENSVPAG00000002915) PKD1L3 (ENSVPAG00000002916) DHODH (ENSVPAG00000002917) TXNL4B (ENSVPAG00000002918) PMFBP1 (ENSVPAG00000002919) Artiodactyla_b ANCESTRAL SPECIES 5 ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000162028.a.b #20 ENSGT00940000154118.b ENSGT00940000162028.a.a #20 ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Pecora ANCESTRAL SPECIES 3 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.rb.a.a ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.rb.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Yarkand deer MODERN SPECIES 22 NXPH4 (ENSCHYG00000002015) LRP1 (ENSCHYG00000002067) STAT6 (ENSCHYG00000002302) NAB2 (ENSCHYG00000002341) NEMP1 (ENSCHYG00000002376) MYO1A (ENSCHYG00000002446) TAC3 (ENSCHYG00000002535) ZBTB39 (ENSCHYG00000002554) GPR182 (ENSCHYG00000002559) ENSCHYG00000002565 #20 RDH16 (ENSCHYG00000002593) SDR9C7 (ENSCHYG00000002626) ENSCHYG00000002650 HSD17B6 (ENSCHYG00000002745) #20 PRIM1 (ENSCHYG00000002764) #21 ENSCHYG00000002804 ##22 ENSCHYG00000002851 #23 ATP5F1B (ENSCHYG00000002934) #24 BAZ2A (ENSCHYG00000002971) #25 RBMS2 (ENSCHYG00000003089) #27 GLS2 (ENSCHYG00000003128) #28 SPRYD4 (ENSCHYG00000003172) #29 MIP (ENSCHYG00000003178) #30 TIMELESS (ENSCHYG00000003196) ENSCHYG00000003221 APOF (ENSCHYG00000003234) STAT2 (ENSCHYG00000003249) IL23A (ENSCHYG00000003289) PAN2 (ENSCHYG00000003311) CNPY2 (ENSCHYG00000003322) CS (ENSCHYG00000003344) Percora_a ANCESTRAL SPECIES 3 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.rb.a.a ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Siberian musk deer MODERN SPECIES 1241 NEMP1 (ENSMMSG00000016873) MYO1A (ENSMMSG00000016701) TAC3 (ENSMMSG00000016614) ZBTB39 (ENSMMSG00000016599) GPR182 (ENSMMSG00000016587) ENSMMSG00000016565 ENSMMSG00000016550 ENSMMSG00000016516 ENSMMSG00000016459 SDR9C7 (ENSMMSG00000016406) ENSMMSG00000016383 #26 ENSMMSG00000016333 HSD17B6 (ENSMMSG00000016311) #20 ENSMMSG00000016273 PRIM1 (ENSMMSG00000016240) #21 ENSMMSG00000016159 ##22 ENSMMSG00000015953 #24 ENSMMSG00000015852 #25 RBMS2 (ENSMMSG00000015740) #27 GLS2 (ENSMMSG00000015620) #28 SPRYD4 (ENSMMSG00000015594) #29 MIP (ENSMMSG00000015573) #30 TIMELESS (ENSMMSG00000015470) ENSMMSG00000015438 APOF (ENSMMSG00000015426) STAT2 (ENSMMSG00000015363) IL23A (ENSMMSG00000015329) PAN2 (ENSMMSG00000015301) CNPY2 (ENSMMSG00000015263) CS (ENSMMSG00000015185) COQ10A (ENSMMSG00000015112) Bovidae ANCESTRAL SPECIES 3 ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.rb.b.a ENSGT00950000182834.A.a.a.w.a ENSGT00940000162028.a.a #20 ENSGT00940000154118.b.rb.a.a ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Bovinae ANCESTRAL SPECIES 17 ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00950000182834.A.a.a.w.a ENSGT00940000162028.a.a #20 ENSGT00940000154118.b.rb.a.a ENSGT00940000154118.b.rb.a.b ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.a.b #20 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813.o American bison MODERN SPECIES 3043 ENSBBBG00000012717 NEMP1 (ENSBBBG00000012736) MYO1A (ENSBBBG00000007932) TAC3 (ENSBBBG00000012783) ZBTB39 (ENSBBBG00000002475) GPR182 (ENSBBBG00000012789) ENSBBBG00000012805 ENSBBBG00000012808 ENSBBBG00000012963 ENSBBBG00000012989 SDR9C7 (ENSBBBG00000013000) ENSBBBG00000013007 ENSBBBG00000007888 #20 HSD17B6 (ENSBBBG00000013035) #20 PRIM1 (ENSBBBG00000013047) #21 ENSBBBG00000013066 ##22 PTGES3 (ENSBBBG00000013107) #23 ATP5F1B (ENSBBBG00000002642) #24 BAZ2A (ENSBBBG00000002669) #25 RBMS2 (ENSBBBG00000013272) #27 GLS2 (ENSBBBG00000013300) #28 SPRYD4 (ENSBBBG00000002703) #29 MIP (ENSBBBG00000013310) #30 TIMELESS (ENSBBBG00000001590) ENSBBBG00000013371 APOF (ENSBBBG00000001582) STAT2 (ENSBBBG00000008286) IL23A (ENSBBBG00000013451) PAN2 (ENSBBBG00000002802) CNPY2 (ENSBBBG00000013563) ENSBBBG00000009053 Bos ANCESTRAL SPECIES 2 ENSGT00390000006330.a.b ENSGT00390000011666.h.b.b.a.a ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.rb.a.a ENSGT00940000154118.b.rb.a.b ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.a.b #20 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT01100000263481.n.a.b.a.b.a.b.b ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Bos_b ANCESTRAL SPECIES 4 ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000011666.h.b.b.a.a ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.rb.a.a ENSGT00940000154118.b.rb.a.b ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT01100000263481.n.a.b.a.b.a.b.b ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Cow MODERN SPECIES 24 NAB2 (ENSBTAG00000006324) ENSBTAG00000031076 NEMP1 (ENSBTAG00000014659) MYO1A (ENSBTAG00000014655) TAC3 (ENSBTAG00000021807) ZBTB39 (ENSBTAG00000038498) GPR182 (ENSBTAG00000039157) ENSBTAG00000049081 ENSBTAG00000050051 RDH16 (ENSBTAG00000001392) SDR9C7 (ENSBTAG00000013443) ENSBTAG00000055155 ENSBTAG00000051761 HSD17B6 (ENSBTAG00000011720) #20 PRIM1 (ENSBTAG00000044000) #21 NACA (ENSBTAG00000010701) ##22 ENSBTAG00000055262 PTGES3 (ENSBTAG00000017967) #23 ATP5F1B (ENSBTAG00000013315) #24 BAZ2A (ENSBTAG00000017840) #25 RBMS2 (ENSBTAG00000017830) #27 SPRYD4 (ENSBTAG00000009281) #29 GLS2 (ENSBTAG00000009284) #28 MIP (ENSBTAG00000010127) #30 TIMELESS (ENSBTAG00000020459) APON (ENSBTAG00000045969) APOF (ENSBTAG00000004384) STAT2 (ENSBTAG00000004380) IL23A (ENSBTAG00000004378) PAN2 (ENSBTAG00000004376) CNPY2 (ENSBTAG00000004374) Hybrid Bos Indicus MODERN SPECIES 24 NAB2 (ENSBIXG00005007004) NEMP1 (ENSBIXG00005012888) MYO1A (ENSBIXG00005013026) TAC3 (ENSBIXG00005013089) ZBTB39 (ENSBIXG00005013102) GPR182 (ENSBIXG00005013112) ENSBIXG00005013123 ENSBIXG00005013438 ENSBIXG00005013487 ENSBIXG00005013505 SDR9C7 (ENSBIXG00005013558) ENSBIXG00005013575 ENSBIXG00005013779 HSD17B6 (ENSBIXG00005013894) #20 PRIM1 (ENSBIXG00005013939) #21 ENSBIXG00005014024 ##22 PTGES3 (ENSBIXG00005014081) #23 ATP5F1B (ENSBIXG00005001839) #24 BAZ2A (ENSBIXG00005014206) #25 RBMS2 (ENSBIXG00005000251) #27 GLS2 (ENSBIXG00005014289) #28 SPRYD4 (ENSBIXG00005001889) #29 MIP (ENSBIXG00005014332) #30 TIMELESS (ENSBIXG00005005934) ENSBIXG00005014370 APOF (ENSBIXG00005014379) STAT2 (ENSBIXG00005014399) IL23A (ENSBIXG00005014416) PAN2 (ENSBIXG00005014495) CNPY2 (ENSBIXG00005005638) ENSBIXG00005005706 Bos_a ANCESTRAL SPECIES 3 ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00950000182834.A.a.a.w.a ENSGT00940000162028.a.a #20 ENSGT00940000154118.b.rb.a.a ENSGT00940000154118.b.rb.a.b ENSGT00940000154118.b.rb.b.b ENSGT00940000161764 ENSGT00940000154118.b.sb ENSGT00940000162028.a.b #20 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT01100000263481.n.a.b.a.b.a.b.b ENSGT00940000154256.yb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Wild yak MODERN SPECIES 1528 ENSBMUG00000018859 ENSBMUG00000018847 HSD17B6 (ENSBMUG00000018818) #20 PRIM1 (ENSBMUG00000018797) #21 ENSBMUG00000018759 ##22 PTGES3 (ENSBMUG00000018662) #23 ATP5F1B (ENSBMUG00000018553) #24 BAZ2A (ENSBMUG00000018464) #25 RBMS2 (ENSBMUG00000018323) #27 GLS2 (ENSBMUG00000018274) #28 SPRYD4 (ENSBMUG00000018242) #29 MIP (ENSBMUG00000018233) #30 TIMELESS (ENSBMUG00000018192) ENSBMUG00000018152 APOF (ENSBMUG00000018139) STAT2 (ENSBMUG00000018117) IL23A (ENSBMUG00000018083) PAN2 (ENSBMUG00000017939) CNPY2 (ENSBMUG00000017783) ENSBMUG00000017759 Domestic yak MODERN SPECIES 24 NEMP1 (ENSBGRG00000004148) MYO1A (ENSBGRG00000004047) ENSBGRG00000003965 ZBTB39 (ENSBGRG00000003920) GPR182 (ENSBGRG00000003907) ENSBGRG00000003857 ENSBGRG00000003844 #20 ENSBGRG00000003798 ENSBGRG00000003774 SDR9C7 (ENSBGRG00000003657) ENSBGRG00000003614 ENSBGRG00000003600 ENSBGRG00000003589 #20 HSD17B6 (ENSBGRG00000003564) #20 PRIM1 (ENSBGRG00000003542) #21 ENSBGRG00000003514 ##22 ENSBGRG00000003503 ENSBGRG00000003401 #23 ATP5F1B (ENSBGRG00000003323) #24 BAZ2A (ENSBGRG00000003190) #25 RBMS2 (ENSBGRG00000003102) #27 GLS2 (ENSBGRG00000002966) #28 SPRYD4 (ENSBGRG00000002935) #29 MIP (ENSBGRG00000002930) #30 TIMELESS (ENSBGRG00000002908) ENSBGRG00000002887 APOF (ENSBGRG00000002880) STAT2 (ENSBGRG00000002647) IL23A (ENSBGRG00000002614) PAN2 (ENSBGRG00000002582) CNPY2 (ENSBGRG00000002556) Cetacea ANCESTRAL SPECIES 8 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000162028.a.b #20 ENSGT00940000154118.b.pb.b ENSGT00940000162028.a.a #20 ENSGT00940000154118.b.pb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.w #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Blue whale MODERN SPECIES 1 NXPH4 (ENSBMSG00010008903) LRP1 (ENSBMSG00010008798) STAT6 (ENSBMSG00010008695) NAB2 (ENSBMSG00010008669) NEMP1 (ENSBMSG00010008654) MYO1A (ENSBMSG00010008622) TAC3 (ENSBMSG00010008569) ZBTB39 (ENSBMSG00010008551) GPR182 (ENSBMSG00010008541) ENSBMSG00010008533 #20 ENSBMSG00010008523 #20 RDH16 (ENSBMSG00010008507) SDR9C7 (ENSBMSG00010008484) HSD17B6 (ENSBMSG00010008464) #20 PRIM1 (ENSBMSG00010008439) #21 ENSBMSG00010008408 ##22 PTGES3 (ENSBMSG00010008330) #23 ENSBMSG00010008276 #24 BAZ2A (ENSBMSG00010008180) #25 ENSBMSG00010008102 RBMS2 (ENSBMSG00010008084) #27 GLS2 (ENSBMSG00010008060) #28 SPRYD4 (ENSBMSG00010008034) #29 MIP (ENSBMSG00010008023) #30 TIMELESS (ENSBMSG00010008010) ENSBMSG00010007993 APOF (ENSBMSG00010007986) STAT2 (ENSBMSG00010007971) IL23A (ENSBMSG00010007956) PAN2 (ENSBMSG00010007942) CNPY2 (ENSBMSG00010007923) Odontoceti ANCESTRAL SPECIES 7 ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.pb.b ENSGT00940000162028.a.a #20 ENSGT00940000154118.b.pb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.w #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Sperm whale MODERN SPECIES 17 NXPH4 (ENSPCTG00005017237) LRP1 (ENSPCTG00005017297) STAT6 (ENSPCTG00005018224) NAB2 (ENSPCTG00005018392) NEMP1 (ENSPCTG00005018448) MYO1A (ENSPCTG00005018524) TAC3 (ENSPCTG00005018801) ENSPCTG00005018833 ENSPCTG00005018865 #20 ENSPCTG00005018887 ENSPCTG00005018932 #20 ENSPCTG00005018975 SDR9C7 (ENSPCTG00005019042) HSD17B6 (ENSPCTG00005019089) #20 PRIM1 (ENSPCTG00005019146) #21 NACA (ENSPCTG00005019191) ##22 PTGES3 (ENSPCTG00005019303) #23 ATP5F1B (ENSPCTG00005019389) #24 BAZ2A (ENSPCTG00005019466) #25 RBMS2 (ENSPCTG00005019997) #27 ENSPCTG00005020067 ENSPCTG00005020099 GLS2 (ENSPCTG00005020110) #28 SPRYD4 (ENSPCTG00005020245) #29 MIP (ENSPCTG00005020265) #30 TIMELESS (ENSPCTG00005020308) ENSPCTG00005020413 IKZF4 (ENSPCTG00005020456) SUOX (ENSPCTG00005006172) RAB5B (ENSPCTG00005006228) CDK2 (ENSPCTG00005006312) Odontoceti_a ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a.e ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.pb.b ENSGT00940000154118.b.pb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.w #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Odontoceti_b ANCESTRAL SPECIES 7 ENSGT00940000161040 ENSGT00390000002762.a.a.e ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.pb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.w #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Vaquita MODERN SPECIES 1 NDUFA4L2 (ENSPSNG00000006121) SHMT2 (ENSPSNG00000006153) NXPH4 (ENSPSNG00000006288) LRP1 (ENSPSNG00000006383) STAT6 (ENSPSNG00000006492) NAB2 (ENSPSNG00000006572) NEMP1 (ENSPSNG00000006630) MYO1A (ENSPSNG00000006677) TAC3 (ENSPSNG00000006778) ZBTB39 (ENSPSNG00000006814) GPR182 (ENSPSNG00000006835) RDH16 (ENSPSNG00000006845) SDR9C7 (ENSPSNG00000006881) HSD17B6 (ENSPSNG00000006917) #20 PRIM1 (ENSPSNG00000006950) #21 ENSPSNG00000007037 ##22 PTGES3 (ENSPSNG00000007149) #23 ATP5F1B (ENSPSNG00000007263) #24 BAZ2A (ENSPSNG00000007406) #25 RBMS2 (ENSPSNG00000007836) #27 GLS2 (ENSPSNG00000007903) #28 SPRYD4 (ENSPSNG00000008071) #29 MIP (ENSPSNG00000008094) #30 TIMELESS (ENSPSNG00000008209) ENSPSNG00000008282 APOF (ENSPSNG00000008312) STAT2 (ENSPSNG00000008353) IL23A (ENSPSNG00000008386) PAN2 (ENSPSNG00000008437) CNPY2 (ENSPSNG00000008498) CS (ENSPSNG00000008567) Monodontidae ANCESTRAL SPECIES 6 ENSGT00940000161040 ENSGT00390000002762.a.a.e ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.pb.a ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.w #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Narwhal MODERN SPECIES 313 STAC3 (ENSMMNG00015021084) NDUFA4L2 (ENSMMNG00015021056) ENSMMNG00015021030 NXPH4 (ENSMMNG00015021013) LRP1 (ENSMMNG00015020900) STAT6 (ENSMMNG00015020805) NAB2 (ENSMMNG00015020767) NEMP1 (ENSMMNG00015020716) MYO1A (ENSMMNG00015020668) TAC3 (ENSMMNG00015020636) ZBTB39 (ENSMMNG00015020619) GPR182 (ENSMMNG00015020610) SDR9C7 (ENSMMNG00015020599) HSD17B6 (ENSMMNG00015020586) #20 PRIM1 (ENSMMNG00015020540) #21 ENSMMNG00015020490 ##22 PTGES3 (ENSMMNG00015020421) #23 ENSMMNG00015020352 #24 BAZ2A (ENSMMNG00015020138) #25 ENSMMNG00015020030 #27 GLS2 (ENSMMNG00015019958) #28 SPRYD4 (ENSMMNG00015019937) #29 MIP (ENSMMNG00015019920) #30 TIMELESS (ENSMMNG00015019865) APOF (ENSMMNG00015019831) STAT2 (ENSMMNG00015019784) IL23A (ENSMMNG00015019758) PAN2 (ENSMMNG00015019731) CNPY2 (ENSMMNG00015019705) CS (ENSMMNG00015019660) COQ10A (ENSMMNG00015019621) Beluga whale MODERN SPECIES 39 NDUFA4L2 (ENSDLEG00000003536) SHMT2 (ENSDLEG00000003549) NXPH4 (ENSDLEG00000003607) LRP1 (ENSDLEG00000003892) STAT6 (ENSDLEG00000005231) NAB2 (ENSDLEG00000005321) NEMP1 (ENSDLEG00000005331) MYO1A (ENSDLEG00000005355) TAC3 (ENSDLEG00000005396) ZBTB39 (ENSDLEG00000005412) GPR182 (ENSDLEG00000005420) ENSDLEG00000005424 SDR9C7 (ENSDLEG00000005442) HSD17B6 (ENSDLEG00000005448) #20 PRIM1 (ENSDLEG00000005458) #21 NACA (ENSDLEG00000005467) ##22 ENSDLEG00000005486 #23 ATP5B (ENSDLEG00000005494) #24 BAZ2A (ENSDLEG00000005511) #25 RBMS2 (ENSDLEG00000005536) #27 GLS2 (ENSDLEG00000005634) #28 SPRYD4 (ENSDLEG00000005656) #29 MIP (ENSDLEG00000005665) #30 TIMELESS (ENSDLEG00000005692) ENSDLEG00000005775 APOF (ENSDLEG00000005801) STAT2 (ENSDLEG00000005822) IL23A (ENSDLEG00000005833) PAN2 (ENSDLEG00000005845) CNPY2 (ENSDLEG00000005916) COQ10A (ENSDLEG00000005975) Euarchontoglires ANCESTRAL SPECIES 6 ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Primates ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Haplorrhini ANCESTRAL SPECIES 3 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Tarsier MODERN SPECIES 2453 ENSTSYG00000028319 ##22 Simiiformes ANCESTRAL SPECIES 4 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Platyrrhini ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Cebidae ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Cebidae_a ANCESTRAL SPECIES 5 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00440000033468.c.b #22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Capuchin MODERN SPECIES 82 ENSCCAG00000037962 ENSCCAG00000024944 ARPC1A (ENSCCAG00000019780) ENSCCAG00000037322 PDAP1 (ENSCCAG00000031892) BUD31 (ENSCCAG00000021788) PTCD1 (ENSCCAG00000034025) CPSF4 (ENSCCAG00000028291) ENSCCAG00000017059 ENSCCAG00000020703 ZNF394 (ENSCCAG00000027351) ZNF789 (ENSCCAG00000025456) ZKSCAN5 (ENSCCAG00000030902) ZNF655 (ENSCCAG00000022358) TMEM225B (ENSCCAG00000018539) ENSCCAG00000037804 ##22 ZSCAN25 (ENSCCAG00000037223) CYP3A5 (ENSCCAG00000034158) CYP3A90 (ENSCCAG00000036748) CYP3A4 (ENSCCAG00000017463) TRIM4 (ENSCCAG00000029392) GJC3 (ENSCCAG00000024102) AZGP1 (ENSCCAG00000033551) ZKSCAN1 (ENSCCAG00000024849) ZSCAN21 (ENSCCAG00000020654) ZNF3 (ENSCCAG00000017227) COPS6 (ENSCCAG00000016311) MCM7 (ENSCCAG00000037289) AP4M1 (ENSCCAG00000026127) TAF6 (ENSCCAG00000022802) CNPY4 (ENSCCAG00000014461) Bolivian squirrel monkey DUPLICATION Bolivian squirrel monkey MODERN SPECIES 60 R3HDM2 (ENSSBOG00000023547) ENSSBOG00000036259 NDUFA4L2 (ENSSBOG00000000521) SHMT2 (ENSSBOG00000028812) LRP1 (ENSSBOG00000033999) STAT6 (ENSSBOG00000020733) NAB2 (ENSSBOG00000021938) NEMP1 (ENSSBOG00000036147) MYO1A (ENSSBOG00000028972) TAC3 (ENSSBOG00000032982) ZBTB39 (ENSSBOG00000020135) RDH16 (ENSSBOG00000026865) SDR9C7 (ENSSBOG00000024925) HSD17B6 (ENSSBOG00000018711) #20 PRIM1 (ENSSBOG00000035864) #21 ENSSBOG00000034868 ##22 Bolivian squirrel monkey MODERN SPECIES 110 EPHA2 (ENSSBOG00000028925) FAM131C (ENSSBOG00000024741) ENSSBOG00000034174 HSPB7 (ENSSBOG00000025780) SRARP (ENSSBOG00000030246) ZBTB17 (ENSSBOG00000028990) ENSSBOG00000024996 SPEN (ENSSBOG00000028770) FBLIM1 (ENSSBOG00000019159) TMEM82 (ENSSBOG00000026126) SLC25A34 (ENSSBOG00000029337) PLEKHM2 (ENSSBOG00000033401) RSC1A1 (ENSSBOG00000032268) AGMAT (ENSSBOG00000034495) DNAJC16 (ENSSBOG00000035624) ENSSBOG00000024838 ##22 CASP9 (ENSSBOG00000009264) ENSSBOG00000030351 CTRC (ENSSBOG00000025369) EFHD2 (ENSSBOG00000032949) FHAD1 (ENSSBOG00000000586) TMEM51 (ENSSBOG00000033958) KAZN (ENSSBOG00000033671) PRDM2 (ENSSBOG00000018480) ENSSBOG00000028333 LRRC38 (ENSSBOG00000033893) Catarrhini ANCESTRAL SPECIES 4 ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Hominoidea ANCESTRAL SPECIES 5 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Gibbon MODERN SPECIES 1 NDUFA4L2 (ENSNLEG00000017371) SHMT2 (ENSNLEG00000017373) LRP1 (ENSNLEG00000030531) STAT6 (ENSNLEG00000017396) NAB2 (ENSNLEG00000017421) NEMP1 (ENSNLEG00000017426) MYO1A (ENSNLEG00000033040) TAC3 (ENSNLEG00000017433) ZBTB39 (ENSNLEG00000019268) ENSNLEG00000034950 GPR182 (ENSNLEG00000017438) RDH16 (ENSNLEG00000017439) SDR9C7 (ENSNLEG00000017440) HSD17B6 (ENSNLEG00000017442) #20 PRIM1 (ENSNLEG00000017443) #21 ENSNLEG00000017453 ##22 ENSNLEG00000017454 #23 ATP5F1B (ENSNLEG00000017458) #24 BAZ2A (ENSNLEG00000017462) #25 RBMS2 (ENSNLEG00000017466) #27 ENSNLEG00000019303 GLS2 (ENSNLEG00000017473) #28 SPRYD4 (ENSNLEG00000017482) #29 MIP (ENSNLEG00000017484) #30 TIMELESS (ENSNLEG00000017486) APOF (ENSNLEG00000017492) STAT2 (ENSNLEG00000017494) IL23A (ENSNLEG00000017498) PAN2 (ENSNLEG00000017499) CNPY2 (ENSNLEG00000017512) CS (ENSNLEG00000017514) Hominidae ANCESTRAL SPECIES 4 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Orangutan MODERN SPECIES 3 SHMT2 (ENSPPYG00000004683) NXPH4 (ENSPPYG00000004682) ENSPPYG00000041371 STAT6 (ENSPPYG00000004680) NAB2 (ENSPPYG00000004679) NEMP1 (ENSPPYG00000004678) MYO1A (ENSPPYG00000004677) TAC3 (ENSPPYG00000004676) ZBTB39 (ENSPPYG00000031176) GPR182 (ENSPPYG00000039450) RDH16 (ENSPPYG00000004675) SDR9C7 (ENSPPYG00000004674) HSD17B6 (ENSPPYG00000004673) #20 PRIM1 (ENSPPYG00000004672) #21 ENSPPYG00000004671 NACA (ENSPPYG00000004670) ##22 PTGES3 (ENSPPYG00000004669) #23 ATP5F1B (ENSPPYG00000004668) #24 BAZ2A (ENSPPYG00000004667) #25 RBMS2 (ENSPPYG00000004665) #27 ENSPPYG00000035194 GLS2 (ENSPPYG00000004664) #28 SPRYD4 (ENSPPYG00000004663) #29 MIP (ENSPPYG00000004662) #30 TIMELESS (ENSPPYG00000004661) ENSPPYG00000004660 APOF (ENSPPYG00000040049) STAT2 (ENSPPYG00000037444) IL23A (ENSPPYG00000004657) PAN2 (ENSPPYG00000004656) CNPY2 (ENSPPYG00000004655) Homo/Pan/Gorilla group ANCESTRAL SPECIES 5 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158.f ENSGT00390000006813 Gorilla MODERN SPECIES 161 ENSGGOG00000036161 ##22 Homo/Pan group ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158.f ENSGT00390000006813 Human MODERN SPECIES 3 SHMT2 (ENSG00000182199) NXPH4 (ENSG00000182379) LRP1 (ENSG00000123384) STAT6 (ENSG00000166888) NAB2 (ENSG00000166886) NEMP1 (ENSG00000166881) MYO1A (ENSG00000166866) TAC3 (ENSG00000166863) ZBTB39 (ENSG00000166860) GPR182 (ENSG00000166856) RDH16 (ENSG00000139547) SDR9C7 (ENSG00000170426) HSD17B6 (ENSG00000025423) #20 PRIM1 (ENSG00000198056) #21 ENSG00000285625 NACA (ENSG00000196531) ##22 PTGES3 (ENSG00000110958) #23 ATP5F1B (ENSG00000110955) #24 BAZ2A (ENSG00000076108) #25 RBMS2 (ENSG00000076067) #27 GLS2 (ENSG00000135423) #28 SPRYD4 (ENSG00000176422) #29 MIP (ENSG00000135517) #30 TIMELESS (ENSG00000111602) APOF (ENSG00000175336) STAT2 (ENSG00000170581) IL23A (ENSG00000110944) PAN2 (ENSG00000135473) CNPY2 (ENSG00000257727) ENSG00000144785 CS (ENSG00000062485) Pan ANCESTRAL SPECIES 4 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p.c #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158.f ENSGT00390000006813 Bonobo MODERN SPECIES 3 SHMT2 (ENSPPAG00000033906) NXPH4 (ENSPPAG00000004184) LRP1 (ENSPPAG00000029361) STAT6 (ENSPPAG00000029694) NAB2 (ENSPPAG00000031480) NEMP1 (ENSPPAG00000032473) MYO1A (ENSPPAG00000032265) TAC3 (ENSPPAG00000039691) ZBTB39 (ENSPPAG00000025376) ENSPPAG00000017514 GPR182 (ENSPPAG00000022193) RDH16 (ENSPPAG00000010809) SDR9C7 (ENSPPAG00000008394) HSD17B6 (ENSPPAG00000029098) #20 PRIM1 (ENSPPAG00000034763) #21 ENSPPAG00000007016 ##22 ENSPPAG00000012378 #23 ATP5F1B (ENSPPAG00000037354) #24 BAZ2A (ENSPPAG00000003707) #25 ENSPPAG00000042975 #27 ENSPPAG00000000307 GLS2 (ENSPPAG00000028139) #28 SPRYD4 (ENSPPAG00000027537) #29 MIP (ENSPPAG00000043947) #30 TIMELESS (ENSPPAG00000035399) APOF (ENSPPAG00000037531) STAT2 (ENSPPAG00000041859) IL23A (ENSPPAG00000043115) PAN2 (ENSPPAG00000001208) CNPY2 (ENSPPAG00000031156) CS (ENSPPAG00000036762) Chimpanzee MODERN SPECIES 377 ENSPTRG00000051027 ##22 Cercopithecidae ANCESTRAL SPECIES 3 ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Rhinopithecus ANCESTRAL SPECIES 192 ENSGT00940000161764 ENSGT00950000183036.a.a.d ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Black snub-nosed monkey MODERN SPECIES 1633 SDR9C7 (ENSRBIG00000031670) ENSRBIG00000010203 HSD17B6 (ENSRBIG00000035773) #20 PRIM1 (ENSRBIG00000039705) #21 NACA (ENSRBIG00000040423) ##22 ENSRBIG00000038317 #23 ATP5F1B (ENSRBIG00000030365) #24 BAZ2A (ENSRBIG00000040119) #25 RBMS2 (ENSRBIG00000036293) #27 GLS2 (ENSRBIG00000032292) #28 SPRYD4 (ENSRBIG00000038455) #29 MIP (ENSRBIG00000040282) #30 TIMELESS (ENSRBIG00000012600) APOF (ENSRBIG00000030835) STAT2 (ENSRBIG00000040469) IL23A (ENSRBIG00000035644) PAN2 (ENSRBIG00000029591) CNPY2 (ENSRBIG00000027781) CS (ENSRBIG00000032425) COQ10A (ENSRBIG00000026274) Cercopithecinae ANCESTRAL SPECIES 7 ENSGT00950000182883.b.a.b ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800.fb #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Cercopithecinae_a ANCESTRAL SPECIES 7 ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b.gb ENSGT00940000154118.b.fb ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800.fb #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Macaca ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.gb ENSGT00940000154118.b.fb ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800.fb #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Macaca_a ANCESTRAL SPECIES 6 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.gb ENSGT00940000154118.b.fb ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800.fb #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.a.l.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00940000161627.a.a.a.a.b.a.a.b.a.a.b.b.b ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00390000006813 Crab-eating macaque MODERN SPECIES 2 SHMT2 (ENSMFAG00000002112) ENSMFAG00000042434 LRP1 (ENSMFAG00000039927) STAT6 (ENSMFAG00000036764) NAB2 (ENSMFAG00000036629) NEMP1 (ENSMFAG00000001688) MYO1A (ENSMFAG00000044427) TAC3 (ENSMFAG00000035535) ZBTB39 (ENSMFAG00000012946) GPR182 (ENSMFAG00000064680) ENSMFAG00000034508 ENSMFAG00000045675 ENSMFAG00000052881 SDR9C7 (ENSMFAG00000034208) HSD17B6 (ENSMFAG00000040118) #20 ENSMFAG00000004178 ##22 PRIM1 (ENSMFAG00000036445) #21 ENSMFAG00000045371 #23 ATP5F1B (ENSMFAG00000042914) #24 BAZ2A (ENSMFAG00000029840) #25 RBMS2 (ENSMFAG00000002049) #27 ENSMFAG00000000609 GLS2 (ENSMFAG00000045451) #28 SPRYD4 (ENSMFAG00000003483) #29 MIP (ENSMFAG00000030328) #30 TIMELESS (ENSMFAG00000030313) ENSMFAG00000064858 APOF (ENSMFAG00000036691) STAT2 (ENSMFAG00000037100) IL23A (ENSMFAG00000000058) PAN2 (ENSMFAG00000002293) Pig-tailed macaque MODERN SPECIES 526 NDUFA4L2 (ENSMNEG00000030349) SHMT2 (ENSMNEG00000041793) NXPH4 (ENSMNEG00000042450) LRP1 (ENSMNEG00000032147) STAT6 (ENSMNEG00000045129) NAB2 (ENSMNEG00000028556) NEMP1 (ENSMNEG00000023962) MYO1A (ENSMNEG00000045540) TAC3 (ENSMNEG00000042940) ZBTB39 (ENSMNEG00000015989) ENSMNEG00000040609 RDH16 (ENSMNEG00000045214) SDR9C7 (ENSMNEG00000045037) HSD17B6 (ENSMNEG00000037670) #20 PRIM1 (ENSMNEG00000032559) #21 NACA (ENSMNEG00000034624) ##22 ENSMNEG00000032804 #23 ATP5F1B (ENSMNEG00000034124) #24 BAZ2A (ENSMNEG00000034555) #25 RBMS2 (ENSMNEG00000035121) #27 ENSMNEG00000030798 GLS2 (ENSMNEG00000035725) #28 SPRYD4 (ENSMNEG00000038600) #29 MIP (ENSMNEG00000033083) #30 TIMELESS (ENSMNEG00000040552) APOF (ENSMNEG00000044594) STAT2 (ENSMNEG00000034007) IL23A (ENSMNEG00000036003) PAN2 (ENSMNEG00000033264) CNPY2 (ENSMNEG00000041624) CS (ENSMNEG00000035815) Cercopithecinae_b ANCESTRAL SPECIES 2 ENSGT00940000166603 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b.gb ENSGT00940000154118.b.fb ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800.fb #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Cercopithecinae_d ANCESTRAL SPECIES 3 ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00910000146902 ENSGT00940000154307.D ENSGT00940000154118.b.gb ENSGT00940000154118.b.fb ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.m #23 ENSGT00550000074800.fb #24 ENSGT00940000159490 #25 ENSGT00940000155250.p #27 ENSGT00390000005727.a.b.a.b.c.b.b ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Sooty mangabey MODERN SPECIES 117 NXPH4 (ENSCATG00000035691) LRP1 (ENSCATG00000044497) STAT6 (ENSCATG00000040616) NAB2 (ENSCATG00000023506) NEMP1 (ENSCATG00000039924) MYO1A (ENSCATG00000033380) TAC3 (ENSCATG00000036447) ZBTB39 (ENSCATG00000015348) ENSCATG00000044587 GPR182 (ENSCATG00000015166) ENSCATG00000033733 ENSCATG00000042416 SDR9C7 (ENSCATG00000040729) HSD17B6 (ENSCATG00000043939) #20 PRIM1 (ENSCATG00000031299) #21 NACA (ENSCATG00000019110) ##22 ENSCATG00000015228 #23 ATP5F1B (ENSCATG00000037301) #24 BAZ2A (ENSCATG00000042491) #25 RBMS2 (ENSCATG00000003342) #27 ENSCATG00000045349 GLS2 (ENSCATG00000039516) #28 SPRYD4 (ENSCATG00000017241) #29 MIP (ENSCATG00000036566) #30 TIMELESS (ENSCATG00000035871) APOF (ENSCATG00000024930) STAT2 (ENSCATG00000040123) IL23A (ENSCATG00000029741) PAN2 (ENSCATG00000045076) CNPY2 (ENSCATG00000042349) CS (ENSCATG00000039101) Drill MODERN SPECIES 983 SHMT2 (ENSMLEG00000031792) NXPH4 (ENSMLEG00000031215) LRP1 (ENSMLEG00000039373) STAT6 (ENSMLEG00000038113) NAB2 (ENSMLEG00000015890) NEMP1 (ENSMLEG00000030213) MYO1A (ENSMLEG00000029951) TAC3 (ENSMLEG00000039458) ZBTB39 (ENSMLEG00000026718) ENSMLEG00000042710 GPR182 (ENSMLEG00000021221) RDH16 (ENSMLEG00000037989) SDR9C7 (ENSMLEG00000034967) HSD17B6 (ENSMLEG00000029350) #20 PRIM1 (ENSMLEG00000008369) #21 NACA (ENSMLEG00000032530) ##22 PTGES3 (ENSMLEG00000043895) #23 ATP5F1B (ENSMLEG00000034572) #24 BAZ2A (ENSMLEG00000042063) #25 RBMS2 (ENSMLEG00000032780) #27 ENSMLEG00000004650 GLS2 (ENSMLEG00000042740) #28 SPRYD4 (ENSMLEG00000008953) #29 MIP (ENSMLEG00000033868) #30 TIMELESS (ENSMLEG00000040486) Strepsirrhini ANCESTRAL SPECIES 3 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Bushbaby MODERN SPECIES 134 NMT2 (ENSOGAG00000008060) RPP38 (ENSOGAG00000008059) ENSOGAG00000033527 MEIG1 (ENSOGAG00000033381) DCLRE1C (ENSOGAG00000004732) SUV39H2 (ENSOGAG00000004729) HSPA14 (ENSOGAG00000004728) MSANTD7 (ENSOGAG00000027284) CDNF (ENSOGAG00000004727) FAM107B (ENSOGAG00000004725) FRMD4A (ENSOGAG00000007298) PRPF18 (ENSOGAG00000007294) BEND7 (ENSOGAG00000010676) SEPHS1 (ENSOGAG00000007807) PHYH (ENSOGAG00000007803) ENSOGAG00000025545 ##22 UCMA (ENSOGAG00000027294) OPTN (ENSOGAG00000000624) CCDC3 (ENSOGAG00000024450) CAMK1D (ENSOGAG00000008560) CDC123 (ENSOGAG00000005820) NUDT5 (ENSOGAG00000005816) SEC61A2 (ENSOGAG00000005809) DHTKD1 (ENSOGAG00000005802) UPF2 (ENSOGAG00000005796) PROSER2 (ENSOGAG00000029648) ECHDC3 (ENSOGAG00000005792) USP6NL (ENSOGAG00000025172) CELF2 (ENSOGAG00000005541) GATA3 (ENSOGAG00000011371) ENSOGAG00000034156 Lemuriformes ANCESTRAL SPECIES 1 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.lb.b ENSGT00940000162028 #20 ENSGT00940000154118.b.lb.a ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Lemuriformes_a ANCESTRAL SPECIES 27 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.lb.b ENSGT00940000162028 #20 ENSGT00940000154118.b.lb.a ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Coquerels sifaka MODERN SPECIES 91 NDUFA4L2 (ENSPCOG00000019477) SHMT2 (ENSPCOG00000024293) NXPH4 (ENSPCOG00000016192) LRP1 (ENSPCOG00000028198) STAT6 (ENSPCOG00000014408) NAB2 (ENSPCOG00000016530) NEMP1 (ENSPCOG00000016183) MYO1A (ENSPCOG00000015135) TAC3 (ENSPCOG00000028599) ENSPCOG00000016062 ENSPCOG00000020017 SDR9C7 (ENSPCOG00000016103) HSD17B6 (ENSPCOG00000016115) #20 ENSPCOG00000019425 PRIM1 (ENSPCOG00000027734) #21 ENSPCOG00000024750 ##22 PTGES3 (ENSPCOG00000028246) #23 ATP5F1B (ENSPCOG00000016499) #24 BAZ2A (ENSPCOG00000017805) #25 ENSPCOG00000016699 #27 GLS2 (ENSPCOG00000019018) #28 SPRYD4 (ENSPCOG00000015229) #29 MIP (ENSPCOG00000020082) #30 TIMELESS (ENSPCOG00000018817) APOF (ENSPCOG00000015999) STAT2 (ENSPCOG00000016628) IL23A (ENSPCOG00000016105) PAN2 (ENSPCOG00000018263) CNPY2 (ENSPCOG00000019272) ENSPCOG00000019826 COQ10A (ENSPCOG00000018212) Greater bamboo lemur MODERN SPECIES 128 MYO1A (ENSPSMG00000023326) TAC3 (ENSPSMG00000023334) ZBTB39 (ENSPSMG00000023342) GPR182 (ENSPSMG00000023346) ENSPSMG00000023352 ENSPSMG00000023358 ENSPSMG00000023363 #20 ENSPSMG00000023371 ENSPSMG00000023379 #20 ENSPSMG00000023385 #20 ENSPSMG00000023390 SDR9C7 (ENSPSMG00000023397) HSD17B6 (ENSPSMG00000023411) #20 ENSPSMG00000023416 PRIM1 (ENSPSMG00000023427) #21 ENSPSMG00000023464 ##22 ENSPSMG00000023507 #23 ENSPSMG00000023515 ATP5F1B (ENSPSMG00000023521) #24 BAZ2A (ENSPSMG00000023555) #25 RBMS2 (ENSPSMG00000023596) #27 GLS2 (ENSPSMG00000023676) #28 SPRYD4 (ENSPSMG00000023714) #29 ENSPSMG00000023721 #30 TIMELESS (ENSPSMG00000023752) ENSPSMG00000023767 ENSPSMG00000023769 APOF (ENSPSMG00000023773) STAT2 (ENSPSMG00000023810) IL23A (ENSPSMG00000023824) PAN2 (ENSPSMG00000023877) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 29 KIF21A (ENSMICG00000013145) CPNE8 (ENSMICG00000017464) ENSMICG00000029831 ENSMICG00000005398 SYT10 (ENSMICG00000010299) ENSMICG00000037631 ENSMICG00000047187 ENSMICG00000047530 ENSMICG00000047394 ENSMICG00000037040 SDR9C7 (ENSMICG00000041509) HSD17B6 (ENSMICG00000043569) #20 ENSMICG00000045041 ENSMICG00000036736 PRIM1 (ENSMICG00000006060) #21 ENSMICG00000036539 ##22 PTGES3 (ENSMICG00000001086) #23 ENSMICG00000045771 #24 BAZ2A (ENSMICG00000001077) #25 RBMS2 (ENSMICG00000001075) #27 GLS2 (ENSMICG00000010158) #28 SPRYD4 (ENSMICG00000042006) #29 MIP (ENSMICG00000027583) #30 TIMELESS (ENSMICG00000000094) APOF (ENSMICG00000000093) STAT2 (ENSMICG00000000089) IL23A (ENSMICG00000027017) PAN2 (ENSMICG00000017661) CNPY2 (ENSMICG00000046113) CS (ENSMICG00000017659) COQ10A (ENSMICG00000017658) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 104 ENSMICG00000041440 ##22 Mouse lemur MODERN SPECIES 22 THBS1 (ENSMICG00000003177) FSIP1 (ENSMICG00000003185) GPR176 (ENSMICG00000007606) ENSMICG00000009902 EIF2AK4 (ENSMICG00000007608) SRP14 (ENSMICG00000007637) BMF (ENSMICG00000032595) ENSMICG00000028916 BUB1B (ENSMICG00000007654) PAK6 (ENSMICG00000007683) ANKRD63 (ENSMICG00000030985) PLCB2 (ENSMICG00000007700) CCDC9B (ENSMICG00000007747) PHGR1 (ENSMICG00000046959) DISP2 (ENSMICG00000027535) ENSMICG00000042710 ##22 KNSTRN (ENSMICG00000041457) IVD (ENSMICG00000008788) BAHD1 (ENSMICG00000008795) CCDC32 (ENSMICG00000008817) RPUSD2 (ENSMICG00000028637) KNL1 (ENSMICG00000045152) RAD51 (ENSMICG00000005941) RMDN3 (ENSMICG00000005945) GCHFR (ENSMICG00000033887) DNAJC17 (ENSMICG00000026885) ZFYVE19 (ENSMICG00000005962) PPP1R14D (ENSMICG00000032223) SPINT1 (ENSMICG00000005969) RHOV (ENSMICG00000037315) VPS18 (ENSMICG00000010011) Euarchontoglires_A ANCESTRAL SPECIES 5 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Glires ANCESTRAL SPECIES 4 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Rodentia ANCESTRAL SPECIES 5 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Rodentia_A ANCESTRAL SPECIES 4 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Hystricomorpha ANCESTRAL SPECIES 9 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 31 Ndufb11 (ENSHGLG00000045173) Rgn (ENSHGLG00000000674) ENSHGLG00000000616 RP2 (ENSHGLG00000047413) ENSHGLG00000020120 SLC9A7 (ENSHGLG00000007119) CHST7 (ENSHGLG00000006779) ENSHGLG00000045686 ENSHGLG00000035126 DIPK2B (ENSHGLG00000006052) KDM6A (ENSHGLG00000005358) ENSHGLG00000004981 ENSHGLG00000047295 ENSHGLG00000044457 ENSHGLG00000004037 ENSHGLG00000039999 ##22 NDP (ENSHGLG00000008619) ENSHGLG00000018403 MAOB (ENSHGLG00000018385) ENSHGLG00000048133 ENSHGLG00000039815 ENSHGLG00000048297 ENSHGLG00000012354 GPR82 (ENSHGLG00000018778) GPR34 (ENSHGLG00000041208) ENSHGLG00000047643 CASK (ENSHGLG00000008006) ENSHGLG00000037147 ENSHGLG00000016669 NYX (ENSHGLG00000004422) ENSHGLG00000034784 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000018174 GPR119 (ENSHGLG00000020429) RBMX2 (ENSHGLG00000048307) ENSHGLG00000028508 ENOX2 (ENSHGLG00000010881) ARHGAP36 (ENSHGLG00000013596) ENSHGLG00000002092 ENSHGLG00000019881 IGSF1 (ENSHGLG00000002270) ENSHGLG00000018874 ENSHGLG00000019864 ENSHGLG00000033634 ENSHGLG00000003373 ENSHGLG00000007311 ENSHGLG00000019909 ENSHGLG00000020040 ##22 ENSHGLG00000033534 ENSHGLG00000004576 FRMD7 (ENSHGLG00000004804) ENSHGLG00000038852 MBNL3 (ENSHGLG00000006589) ENSHGLG00000007327 ENSHGLG00000020292 ENSHGLG00000020448 ENSHGLG00000037440 ENSHGLG00000033346 GPC4 (ENSHGLG00000050287) ENSHGLG00000005212 ENSHGLG00000005130 ENSHGLG00000050037 ENSHGLG00000020853 Hystricomorpha_a ANCESTRAL SPECIES 7 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Guinea pig MODERN SPECIES 9 NDUFA4L2 (ENSCPOG00000035802) SHMT2 (ENSCPOG00000012840) LRP1 (ENSCPOG00000031730) STAT6 (ENSCPOG00000012941) NAB2 (ENSCPOG00000012940) NEMP1 (ENSCPOG00000034078) MYO1A (ENSCPOG00000012927) TAC3 (ENSCPOG00000012924) ZBTB39 (ENSCPOG00000035858) GPR182 (ENSCPOG00000022599) RDH16 (ENSCPOG00000002833) SDR9C7 (ENSCPOG00000040671) ENSCPOG00000002890 #20 ENSCPOG00000006822 #20 PRIM1 (ENSCPOG00000024424) #21 ENSCPOG00000012654 ##22 PTGES3 (ENSCPOG00000000057) #23 ATP5F1B (ENSCPOG00000023092) #24 BAZ2A (ENSCPOG00000006404) #25 RBMS2 (ENSCPOG00000008256) #27 GLS2 (ENSCPOG00000002352) #28 SPRYD4 (ENSCPOG00000002349) #29 MIP (ENSCPOG00000002347) #30 TIMELESS (ENSCPOG00000002338) APOF (ENSCPOG00000014939) STAT2 (ENSCPOG00000014930) IL23A (ENSCPOG00000014926) PAN2 (ENSCPOG00000014918) CNPY2 (ENSCPOG00000020068) CS (ENSCPOG00000014910) COQ10A (ENSCPOG00000014909) Hystricomorpha_b ANCESTRAL SPECIES 13 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256.jb #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Long-tailed chinchilla MODERN SPECIES 165 STAT6 (ENSCLAG00000011587) NAB2 (ENSCLAG00000009310) NEMP1 (ENSCLAG00000011169) MYO1A (ENSCLAG00000009254) TAC3 (ENSCLAG00000014146) ZBTB39 (ENSCLAG00000012800) GPR182 (ENSCLAG00000012163) ENSCLAG00000009985 ENSCLAG00000012992 #20 ENSCLAG00000011030 ENSCLAG00000013334 ENSCLAG00000012956 SDR9C7 (ENSCLAG00000009483) ENSCLAG00000013306 #20 PRIM1 (ENSCLAG00000010248) #21 Naca (ENSCLAG00000013441) ##22 ENSCLAG00000013717 #23 ATP5F1B (ENSCLAG00000011615) #24 BAZ2A (ENSCLAG00000010711) #25 RBMS2 (ENSCLAG00000012661) #27 SPRYD4 (ENSCLAG00000013017) #29 GLS2 (ENSCLAG00000009741) #28 MIP (ENSCLAG00000009467) #30 TIMELESS (ENSCLAG00000012850) APOF (ENSCLAG00000017022) STAT2 (ENSCLAG00000012105) IL23A (ENSCLAG00000011380) PAN2 (ENSCLAG00000011700) CNPY2 (ENSCLAG00000014215) CS (ENSCLAG00000014833) COQ10A (ENSCLAG00000016266) Degu DUPLICATION Degu MODERN SPECIES 158 TRPC5 (ENSODEG00000015042) LHFPL1 (ENSODEG00000012333) AMOT (ENSODEG00000011962) ENSODEG00000012271 ENSODEG00000011733 ENSODEG00000012804 ENSODEG00000012999 ENSODEG00000012702 ENSODEG00000011755 HTR2C (ENSODEG00000012130) ENSODEG00000011935 IL13RA2 (ENSODEG00000014962) ENSODEG00000013562 LRCH2 (ENSODEG00000011349) ENSODEG00000020187 ENSODEG00000012403 ##22 PLS3 (ENSODEG00000011831) ENSODEG00000011300 Degu DUPLICATION Degu MODERN SPECIES 109 PNPLA8 (ENSODEG00000002289) ENSODEG00000000630 ##22 ENSODEG00000000647 ENSODEG00000000666 LAMB1 (ENSODEG00000000690) DLD (ENSODEG00000000733) ENSODEG00000000746 ENSODEG00000000753 SLC26A3 (ENSODEG00000000813) ENSODEG00000001115 ENSODEG00000018679 SLC26A4 (ENSODEG00000001172) ENSODEG00000001457 DUS4L (ENSODEG00000001582) COG5 (ENSODEG00000001169) ENSODEG00000001284 GPR22 (ENSODEG00000001302) Degu MODERN SPECIES 78 ENSODEG00000012366 ZNF341 (ENSODEG00000013884) PXMP4 (ENSODEG00000015173) E2F1 (ENSODEG00000012327) ENSODEG00000013210 NECAB3 (ENSODEG00000012739) ENSODEG00000013862 CBFA2T2 (ENSODEG00000012562) ENSODEG00000019960 SNTA1 (ENSODEG00000012817) CDK5RAP1 (ENSODEG00000013190) BPIFB1 (ENSODEG00000012392) BPIFA1 (ENSODEG00000011803) BPIFA3 (ENSODEG00000011797) ENSODEG00000013174 ENSODEG00000012886 ##22 ENSODEG00000012670 BPIFB4 (ENSODEG00000013037) BPIFB3 (ENSODEG00000012502) BPIFB6 (ENSODEG00000011706) BPIFB2 (ENSODEG00000012498) SUN5 (ENSODEG00000012284) ENSODEG00000012036 DNMT3B (ENSODEG00000011753) COMMD7 (ENSODEG00000014983) NOL4L (ENSODEG00000012307) ENSODEG00000012381 KIF3B (ENSODEG00000012196) ENSODEG00000019976 POFUT1 (ENSODEG00000012053) PLAGL2 (ENSODEG00000012837) Degu MODERN SPECIES 122 ENSODEG00000006114 ZPLD1 (ENSODEG00000007525) ENSODEG00000007067 ENSODEG00000005667 NFKBIZ (ENSODEG00000005703) ENSODEG00000005326 ENSODEG00000007096 ##22 NXPE3 (ENSODEG00000006809) ENSODEG00000006503 ENSODEG00000005842 ZBTB11 (ENSODEG00000006262) ENSODEG00000019290 ENSODEG00000005207 SENP7 (ENSODEG00000006738) ENSODEG00000005550 IMPG2 (ENSODEG00000006079) ABI3BP (ENSODEG00000005855) ENSODEG00000005535 ADGRG7 (ENSODEG00000005676) TMEM45A (ENSODEG00000005098) ENSODEG00000006299 ENSODEG00000019267 Sciuridae ANCESTRAL SPECIES 14 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Eurasian red squirrel MODERN SPECIES 14 LRP1 (ENSSVLG00005009995) STAT6 (ENSSVLG00005009880) NAB2 (ENSSVLG00005009807) NEMP1 (ENSSVLG00005009668) MYO1A (ENSSVLG00005009487) TAC3 (ENSSVLG00005009429) ZBTB39 (ENSSVLG00005009416) GPR182 (ENSSVLG00005009407) RDH16 (ENSSVLG00005009375) ENSSVLG00005009344 ENSSVLG00005009281 ENSSVLG00005009263 ENSSVLG00005009223 ENSSVLG00005009208 ENSSVLG00005009127 #21 ENSSVLG00005009065 ##22 PTGES3 (ENSSVLG00005008976) #23 ATP5F1B (ENSSVLG00005008891) #24 BAZ2A (ENSSVLG00005008631) #25 RBMS2 (ENSSVLG00005008523) #27 GLS2 (ENSSVLG00005008285) #28 ENSSVLG00005008222 #29 MIP (ENSSVLG00005008182) #30 TIMELESS (ENSSVLG00005007872) ENSSVLG00005007805 APOF (ENSSVLG00005007709) STAT2 (ENSSVLG00005007635) IL23A (ENSSVLG00005007584) PAN2 (ENSSVLG00005007533) CNPY2 (ENSSVLG00005007500) ENSSVLG00005007387 Marmotini ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Marmotini_b ANCESTRAL SPECIES 3 ENSGT00940000155609 ENSGT00950000183092.a ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.ob #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Squirrel MODERN SPECIES 246 ENSSTOG00000013424 STAC3 (ENSSTOG00000013409) SHMT2 (ENSSTOG00000013388) NXPH4 (ENSSTOG00000024980) LRP1 (ENSSTOG00000013305) STAT6 (ENSSTOG00000013280) NAB2 (ENSSTOG00000020459) NEMP1 (ENSSTOG00000012331) MYO1A (ENSSTOG00000012304) TAC3 (ENSSTOG00000012292) ZBTB39 (ENSSTOG00000012284) GPR182 (ENSSTOG00000020264) RDH16 (ENSSTOG00000021331) SDR9C7 (ENSSTOG00000026458) PRIM1 (ENSSTOG00000009049) #21 ENSSTOG00000009028 ##22 ENSSTOG00000030668 #23 ENSSTOG00000013882 #24 BAZ2A (ENSSTOG00000013452) #25 RBMS2 (ENSSTOG00000013442) #27 GLS2 (ENSSTOG00000020896) #28 SPRYD4 (ENSSTOG00000024949) #29 MIP (ENSSTOG00000002295) #30 TIMELESS (ENSSTOG00000014170) STAT2 (ENSSTOG00000015985) IL23A (ENSSTOG00000015981) PAN2 (ENSSTOG00000015974) CNPY2 (ENSSTOG00000015971) CS (ENSSTOG00000015969) COQ10A (ENSSTOG00000015967) ANKRD52 (ENSSTOG00000015950) Rodentia_B ANCESTRAL SPECIES 3 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Kangaroo rat MODERN SPECIES 322 R3hdm2 (ENSDORG00000011462) Stac3 (ENSDORG00000011461) Ndufa4l2 (ENSDORG00000024207) Shmt2 (ENSDORG00000011460) Nxph4 (ENSDORG00000012565) Lrp1 (ENSDORG00000012553) Stat6 (ENSDORG00000012548) Nab2 (ENSDORG00000029120) Nemp1 (ENSDORG00000013953) Myo1a (ENSDORG00000001275) Tac2 (ENSDORG00000001270) ENSDORG00000003680 #20 Sdr9c7 (ENSDORG00000003679) ENSDORG00000008049 #20 ENSDORG00000014523 #21 ENSDORG00000014522 ##22 Ptges3 (ENSDORG00000000964) #23 Atp5b (ENSDORG00000009241) #24 Baz2a (ENSDORG00000009234) #25 Rbms2 (ENSDORG00000009231) #27 Gls2 (ENSDORG00000001951) #28 Spryd4 (ENSDORG00000029899) #29 Mip (ENSDORG00000006382) #30 Timeless (ENSDORG00000007148) Stat2 (ENSDORG00000012958) Il23a (ENSDORG00000012955) Pan2 (ENSDORG00000012951) Cnpy2 (ENSDORG00000012950) ENSDORG00000012948 Coq10a (ENSDORG00000012947) Ankrd52 (ENSDORG00000012944) Myomorpha ANCESTRAL SPECIES 2 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Lesser Egyptian jerboa MODERN SPECIES 42 Inhbe (ENSJJAG00000005854) Inhbc (ENSJJAG00000024406) R3hdm2 (ENSJJAG00000010001) Stac3 (ENSJJAG00000004686) Ndufa4l2 (ENSJJAG00000022945) Shmt2 (ENSJJAG00000006620) Nxph4 (ENSJJAG00000005486) Lrp1 (ENSJJAG00000024081) Stat6 (ENSJJAG00000024129) Nab2 (ENSJJAG00000016380) Nemp1 (ENSJJAG00000020038) Myo1a (ENSJJAG00000012576) Tac2 (ENSJJAG00000015356) Sdr9c7 (ENSJJAG00000013857) Prim1 (ENSJJAG00000016717) #21 ENSJJAG00000021261 ##22 ENSJJAG00000021434 #23 Baz2a (ENSJJAG00000009782) #25 ENSJJAG00000015940 #27 Gls2 (ENSJJAG00000021800) #28 Spryd4 (ENSJJAG00000011088) #29 Mip (ENSJJAG00000018656) #30 Timeless (ENSJJAG00000010259) Stat2 (ENSJJAG00000014738) Il23a (ENSJJAG00000018889) Pan2 (ENSJJAG00000013044) Cnpy2 (ENSJJAG00000020135) ENSJJAG00000024275 Ankrd52 (ENSJJAG00000019796) Slc39a5 (ENSJJAG00000010955) Nabp2 (ENSJJAG00000024279) Muroidea ANCESTRAL SPECIES 5 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Muroidea_A ANCESTRAL SPECIES 22 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Murinae ANCESTRAL SPECIES 22 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.a.a.a ENSGT00940000154118.b.w ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 Mus ANCESTRAL SPECIES 23 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.w.b ENSGT00940000154118.b.w.a.a ENSGT00940000154118.b.w.a.b ENSGT00940000154118.b.x ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813.s Mus_A ANCESTRAL SPECIES 11 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.w.b ENSGT00940000154118.b.w.a.a ENSGT00940000154118.b.w.a.b ENSGT00940000154118.b.x ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813.s Mus_B ANCESTRAL SPECIES 10 ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.w.b ENSGT00940000154118.b.w.a.a ENSGT00940000154118.b.w.a.b ENSGT00940000154118.b.x ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813.s Mus_C ANCESTRAL SPECIES 7 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b.w.a.b ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813.s Steppe mouse MODERN SPECIES 2674 ENSMSIG00000006869 Prim1 (ENSMSIG00000006902) #21 ENSMSIG00000007006 ##22 Ptges3 (ENSMSIG00000007018) #23 Atp5b (ENSMSIG00000007056) #24 Baz2a (ENSMSIG00000007101) #25 ENSMSIG00000007270 #27 ENSMSIG00000007384 Gls2 (ENSMSIG00000007430) #28 Spryd4 (ENSMSIG00000007508) #29 Mip (ENSMSIG00000007522) #30 Timeless (ENSMSIG00000007572) Apon (ENSMSIG00000007837) Apof (ENSMSIG00000007852) Stat2 (ENSMSIG00000007867) Il23a (ENSMSIG00000007967) Pan2 (ENSMSIG00000007997) ENSMSIG00000008203 spretus MODERN SPECIES 1 Shmt2 (MGP_SPRETEiJ_G0016725) Nxph4 (MGP_SPRETEiJ_G0016726) Lrp1 (MGP_SPRETEiJ_G0016727) Stat6 (MGP_SPRETEiJ_G0016728) Nab2 (MGP_SPRETEiJ_G0016729) Myo1a (MGP_SPRETEiJ_G0016731) Tac2 (MGP_SPRETEiJ_G0016732) Zbtb39 (MGP_SPRETEiJ_G0016733) Gpr182 (MGP_SPRETEiJ_G0016734) MGP_SPRETEiJ_G0016735 MGP_SPRETEiJ_G0016737 MGP_SPRETEiJ_G0016738 Sdr9c7 (MGP_SPRETEiJ_G0016739) Hsd17b6 (MGP_SPRETEiJ_G0016740) #20 Prim1 (MGP_SPRETEiJ_G0016741) #21 Naca (MGP_SPRETEiJ_G0016742) ##22 Ptges3 (MGP_SPRETEiJ_G0016743) #23 Atp5b (MGP_SPRETEiJ_G0016744) #24 Baz2a (MGP_SPRETEiJ_G0016745) #25 Rbms2 (MGP_SPRETEiJ_G0016746) #27 Gls2 (MGP_SPRETEiJ_G0016747) #28 Spryd4 (MGP_SPRETEiJ_G0016748) #29 Mip (MGP_SPRETEiJ_G0016749) #30 Timeless (MGP_SPRETEiJ_G0016750) Apon (MGP_SPRETEiJ_G0016751) Apof (MGP_SPRETEiJ_G0016752) Stat2 (MGP_SPRETEiJ_G0016753) Il23a (MGP_SPRETEiJ_G0016754) Pan2 (MGP_SPRETEiJ_G0016755) Cnpy2 (MGP_SPRETEiJ_G0016756) Cs (MGP_SPRETEiJ_G0016757) Mouse MODERN SPECIES 1 Nemp1 (ENSMUSG00000040195) Myo1a (ENSMUSG00000025401) Tac2 (ENSMUSG00000025400) Zbtb39 (ENSMUSG00000044617) Gpr182 (ENSMUSG00000058396) Rdh1 (ENSMUSG00000089789) Rdh16f1 (ENSMUSG00000099009) Rdh9 (ENSMUSG00000056148) Rdh16 (ENSMUSG00000069456) Rdh19 (ENSMUSG00000054052) Rdh16f2 (ENSMUSG00000074639) Rdh7 (ENSMUSG00000040134) Sdr9c7 (ENSMUSG00000040127) Hsd17b6 (ENSMUSG00000025396) #20 Prim1 (ENSMUSG00000025395) #21 Naca (ENSMUSG00000061315) ##22 Ptges3 (ENSMUSG00000071072) #23 Atp5b (ENSMUSG00000025393) #24 Baz2a (ENSMUSG00000040054) #25 Rbms2 (ENSMUSG00000040043) #27 Gls2 (ENSMUSG00000044005) #28 Spryd4 (ENSMUSG00000051346) #29 Mip (ENSMUSG00000025389) #30 Timeless (ENSMUSG00000039994) Apon (ENSMUSG00000051716) Apof (ENSMUSG00000047631) Stat2 (ENSMUSG00000040033) Il23a (ENSMUSG00000025383) Pan2 (ENSMUSG00000005682) Cnpy2 (ENSMUSG00000025381) Cs (ENSMUSG00000005683) Ryukyu mouse MODERN SPECIES 1 Lrp1 (MGP_CAROLIEiJ_G0015901) Stat6 (MGP_CAROLIEiJ_G0015902) Nab2 (MGP_CAROLIEiJ_G0015903) Nemp1 (MGP_CAROLIEiJ_G0015904) Myo1a (MGP_CAROLIEiJ_G0015905) Tac2 (MGP_CAROLIEiJ_G0015906) Zbtb39 (MGP_CAROLIEiJ_G0015907) Gpr182 (MGP_CAROLIEiJ_G0015908) Rdh1 (MGP_CAROLIEiJ_G0015909) MGP_CAROLIEiJ_G0015911 MGP_CAROLIEiJ_G0015912 Rdh7 (MGP_CAROLIEiJ_G0015913) Sdr9c7 (MGP_CAROLIEiJ_G0015914) MGP_CAROLIEiJ_G0015915 #20 Prim1 (MGP_CAROLIEiJ_G0015916) #21 Naca (MGP_CAROLIEiJ_G0015917) ##22 Atp5b (MGP_CAROLIEiJ_G0015919) #24 Baz2a (MGP_CAROLIEiJ_G0015920) #25 Rbms2 (MGP_CAROLIEiJ_G0015921) #27 Gls2 (MGP_CAROLIEiJ_G0015922) #28 Spryd4 (MGP_CAROLIEiJ_G0015923) #29 Mip (MGP_CAROLIEiJ_G0015924) #30 Timeless (MGP_CAROLIEiJ_G0015925) Apon (MGP_CAROLIEiJ_G0015926) Apof (MGP_CAROLIEiJ_G0015927) Stat2 (MGP_CAROLIEiJ_G0015928) Il23a (MGP_CAROLIEiJ_G0015929) Pan2 (MGP_CAROLIEiJ_G0015930) Cnpy2 (MGP_CAROLIEiJ_G0015931) Cs (MGP_CAROLIEiJ_G0015932) Coq10a (MGP_CAROLIEiJ_G0015933) Shrew mouse MODERN SPECIES 22 Nab2 (MGP_PahariEiJ_G0031182) Nemp1 (MGP_PahariEiJ_G0031181) Myo1a (MGP_PahariEiJ_G0031180) Tac2 (MGP_PahariEiJ_G0031179) Zbtb39 (MGP_PahariEiJ_G0031178) Gpr182 (MGP_PahariEiJ_G0031177) MGP_PahariEiJ_G0031176 MGP_PahariEiJ_G0031175 MGP_PahariEiJ_G0031174 MGP_PahariEiJ_G0031173 Rdh16f2 (MGP_PahariEiJ_G0031172) MGP_PahariEiJ_G0031171 Sdr9c7 (MGP_PahariEiJ_G0031170) Hsd17b6 (MGP_PahariEiJ_G0031169) #20 Prim1 (MGP_PahariEiJ_G0031168) #21 Naca (MGP_PahariEiJ_G0031167) ##22 Atp5b (MGP_PahariEiJ_G0031165) #24 Baz2a (MGP_PahariEiJ_G0031164) #25 Rbms2 (MGP_PahariEiJ_G0031163) #27 Gls2 (MGP_PahariEiJ_G0031162) #28 Spryd4 (MGP_PahariEiJ_G0031161) #29 Mip (MGP_PahariEiJ_G0031160) #30 Timeless (MGP_PahariEiJ_G0031159) MGP_PahariEiJ_G0031158 MGP_PahariEiJ_G0031157 MGP_PahariEiJ_G0031156 Il23a (MGP_PahariEiJ_G0031155) Pan2 (MGP_PahariEiJ_G0031154) Cnpy2 (MGP_PahariEiJ_G0031153) Cs (MGP_PahariEiJ_G0031152) Coq10a (MGP_PahariEiJ_G0031151) Rat MODERN SPECIES 17 ENSRNOG00000067773 LOC103692755 (ENSRNOG00000068259) Hsd17b6 (ENSRNOG00000002597) #20 Prim1 (ENSRNOG00000031993) #21 Naca (ENSRNOG00000002632) ##22 Ptges3 (ENSRNOG00000002642) #23 Atp5f1b (ENSRNOG00000002840) #24 Baz2a (ENSRNOG00000053881) #25 Rbms2 (ENSRNOG00000003076) #27 Gls2 (ENSRNOG00000031612) #28 Spryd4 (ENSRNOG00000003127) #29 Mip (ENSRNOG00000003132) #30 Timeless (ENSRNOG00000031916) Apon (ENSRNOG00000033466) Stat2 (ENSRNOG00000031081) Il23a (ENSRNOG00000003254) Pan2 (ENSRNOG00000032441) Cnpy2 (ENSRNOG00000003549) Cs (ENSRNOG00000023520) Coq10a (ENSRNOG00000029571) Cricetidae ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00440000033468.c.a ##22 Golden Hamster MODERN SPECIES 890 Ezh2 (ENSMAUG00000008772) Cul1 (ENSMAUG00000008868) ENSMAUG00000008677 ENSMAUG00000008420 ##22 Cricetidae_B ANCESTRAL SPECIES 35 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 ENSGT00390000006813 ENSGT00940000160056 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 353 Ptrhd1 (ENSMOCG00000001204) ENSMOCG00000004487 Adcy3 (ENSMOCG00000000285) Dnajc27 (ENSMOCG00000015357) Efr3b (ENSMOCG00000017910) Pomc (ENSMOCG00000010293) ENSMOCG00000020449 Dtnb (ENSMOCG00000015987) ENSMOCG00000001748 Asxl2 (ENSMOCG00000003954) Kif3c (ENSMOCG00000000499) Rab10 (ENSMOCG00000020028) ENSMOCG00000013952 Garem2 (ENSMOCG00000003375) Hadha (ENSMOCG00000019513) ENSMOCG00000015399 ##22 Il6 (ENSMOCG00000008857) Hycc1 (ENSMOCG00000012168) Klhl7 (ENSMOCG00000014969) Nupl2 (ENSMOCG00000014431) Gpnmb (ENSMOCG00000017232) Malsu1 (ENSMOCG00000011177) Igf2bp3 (ENSMOCG00000001740) ENSMOCG00000014464 ENSMOCG00000007609 Ccdc126 (ENSMOCG00000004033) Fam221a (ENSMOCG00000005873) Stk31 (ENSMOCG00000005284) Plekha8 (ENSMOCG00000012638) Fkbp14 (ENSMOCG00000002920) Scrn1 (ENSMOCG00000001909) Prairie vole DUPLICATION Prairie vole MODERN SPECIES 182 Sdr9c7 (ENSMOCG00000001984) Hsd17b6 (ENSMOCG00000014834) #20 Prim1 (ENSMOCG00000001141) #21 ENSMOCG00000014533 ##22 ENSMOCG00000015668 #23 ENSMOCG00000005638 #24 Baz2a (ENSMOCG00000012655) #25 Rbms2 (ENSMOCG00000015140) #27 Gls2 (ENSMOCG00000006273) #28 Spryd4 (ENSMOCG00000021819) #29 Mip (ENSMOCG00000016991) #30 ENSMOCG00000019429 Apof (ENSMOCG00000012603) Stat2 (ENSMOCG00000005506) Il23a (ENSMOCG00000014943) Pan2 (ENSMOCG00000007191) Cnpy2 (ENSMOCG00000014978) ENSMOCG00000003452 Coq10a (ENSMOCG00000002793) Prairie vole MODERN SPECIES 6 Aggf1 (ENSMOCG00000003377) ENSMOCG00000001987 Crhbp (ENSMOCG00000021245) S100z (ENSMOCG00000020194) F2rl1 (ENSMOCG00000013582) F2r (ENSMOCG00000012362) F2rl2 (ENSMOCG00000008663) Iqgap2 (ENSMOCG00000002734) Sv2c (ENSMOCG00000021524) Poc5 (ENSMOCG00000009038) Ankdd1b (ENSMOCG00000003243) ENSMOCG00000014817 Polk (ENSMOCG00000016143) ENSMOCG00000019480 Hmgcr (ENSMOCG00000008012) ENSMOCG00000019171 ##22 Ankrd31 (ENSMOCG00000009502) Gcnt4 (ENSMOCG00000017465) Fam169a (ENSMOCG00000014172) ENSMOCG00000012395 ENSMOCG00000004402 Hexb (ENSMOCG00000005839) Enc1 (ENSMOCG00000022713) Arhgef28 (ENSMOCG00000017301) Utp15 (ENSMOCG00000000493) Ankra2 (ENSMOCG00000014365) ENSMOCG00000012385 Btf3 (ENSMOCG00000011394) Foxd1 (ENSMOCG00000005673) Tmem174 (ENSMOCG00000013056) Tmem171 (ENSMOCG00000004565) Tree shrew DUPLICATION Tree shrew MODERN SPECIES 4898 ENSTBEG00000016270 ##22 Tree shrew MODERN SPECIES 7285 ENSTBEG00000014116 ##22 Marsupialia ANCESTRAL SPECIES 11 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000161764 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 Marsupialia_b ANCESTRAL SPECIES 13 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 Tasmanian devil MODERN SPECIES 4 NDUFA4L2 (ENSSHAG00000029208) SHMT2 (ENSSHAG00000002708) LRP1 (ENSSHAG00000007379) STAT6 (ENSSHAG00000006372) NAB2 (ENSSHAG00000006277) NEMP1 (ENSSHAG00000005742) MYO1A (ENSSHAG00000005404) TAC3 (ENSSHAG00000005021) ZBTB39 (ENSSHAG00000025188) GPR182 (ENSSHAG00000026071) RDH16 (ENSSHAG00000031840) SDR9C7 (ENSSHAG00000020616) ENSSHAG00000001470 HSD17B6 (ENSSHAG00000003202) #20 PRIM1 (ENSSHAG00000003174) #21 ENSSHAG00000025553 ##22 ENSSHAG00000031892 #23 ATP5F1B (ENSSHAG00000002661) #24 BAZ2A (ENSSHAG00000000118) #25 RBMS2 (ENSSHAG00000020932) #27 GLS2 (ENSSHAG00000003536) #28 SPRYD4 (ENSSHAG00000029425) #29 MIP (ENSSHAG00000002486) #30 TIMELESS (ENSSHAG00000000431) STAT2 (ENSSHAG00000000508) IL23A (ENSSHAG00000025056) PAN2 (ENSSHAG00000000122) CS (ENSSHAG00000000672) COQ10A (ENSSHAG00000001551) ANKRD52 (ENSSHAG00000001327) SLC39A5 (ENSSHAG00000002221) Diprotodontia ANCESTRAL SPECIES 8 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 Diprotodontia_a ANCESTRAL SPECIES 8 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028 #20 ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000174110 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 Common wonbat MODERN SPECIES 682 STAC3 (ENSVURG00010023194) ENSVURG00010023200 SHMT2 (ENSVURG00010023203) NXPH4 (ENSVURG00010023207) LRP1 (ENSVURG00010023315) STAT6 (ENSVURG00010023612) NAB2 (ENSVURG00010023614) NEMP1 (ENSVURG00010023617) MYO1A (ENSVURG00010023618) TAC3 (ENSVURG00010023622) ZBTB39 (ENSVURG00010023623) GPR182 (ENSVURG00010023624) RDH16 (ENSVURG00010023625) SDR9C7 (ENSVURG00010023627) ENSVURG00010023630 ENSVURG00010023633 ##22 PTGES3 (ENSVURG00010023636) #23 ATP5F1B (ENSVURG00010023640) #24 BAZ2A (ENSVURG00010023645) #25 RBMS2 (ENSVURG00010023648) #27 ENSVURG00010023651 GLS2 (ENSVURG00010023652) #28 SPRYD4 (ENSVURG00010023655) #29 MIP (ENSVURG00010023657) #30 TIMELESS (ENSVURG00010023659) ENSVURG00010023661 STAT2 (ENSVURG00010023662) IL23A (ENSVURG00010023664) PAN2 (ENSVURG00010023667) ENSVURG00010023683 CS (ENSVURG00010023685) koala MODERN SPECIES 37 NDUFA4L2 (ENSPCIG00000032569) SHMT2 (ENSPCIG00000024398) NXPH4 (ENSPCIG00000035483) LRP1 (ENSPCIG00000024483) STAT6 (ENSPCIG00000024615) NAB2 (ENSPCIG00000024618) NEMP1 (ENSPCIG00000024619) MYO1A (ENSPCIG00000024623) TAC3 (ENSPCIG00000024626) ZBTB39 (ENSPCIG00000031658) GPR182 (ENSPCIG00000024628) RDH16 (ENSPCIG00000024627) SDR9C7 (ENSPCIG00000024629) HSD17B6 (ENSPCIG00000031287) #20 PRIM1 (ENSPCIG00000024632) #21 ENSPCIG00000024633 ##22 ENSPCIG00000031059 #23 ATP5F1B (ENSPCIG00000018036) #24 BAZ2A (ENSPCIG00000018044) #25 RBMS2 (ENSPCIG00000018048) #27 ENSPCIG00000018051 ENSPCIG00000024634 GLS2 (ENSPCIG00000024635) #28 SPRYD4 (ENSPCIG00000024636) #29 MIP (ENSPCIG00000024637) #30 TIMELESS (ENSPCIG00000024638) ENSPCIG00000037057 STAT2 (ENSPCIG00000024641) IL23A (ENSPCIG00000024642) PAN2 (ENSPCIG00000024643) ENSPCIG00000024644 Amniota ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Mammalia ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Theria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Marsupialia ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Opossum MODERN SPECIES 369 ENSMODG00000041974 ENSMODG00000019856 ##22 PTGES3 (ENSMODG00000019855) #23 ATP5F1B (ENSMODG00000019853) #24 Eutheria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Atlantogenata ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Afrotheria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Afrotheria_a ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Hyrax MODERN SPECIES 6763 PRIM1 (ENSPCAG00000007103) #21 ENSPCAG00000007067 ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Euarchontoglires ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Primates ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Haplorrhini ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Simiiformes ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Catarrhini ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Cercopithecidae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Cercopithecinae DUPLICATION Cercopithecinae DUPLICATION Cercopithecinae ANCESTRAL SPECIES 4 ENSGT00940000154173.A.a.c.b ENSGT00510000046704.a ENSGT00390000018533 ENSGT00940000156673 ENSGT00940000159010 ENSGT00940000158902 ENSGT00950000183166.a.a.a.a ENSGT00390000015991 ENSGT00390000007230 ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000156740 ENSGT00390000013680.b ENSGT00390000011888 ENSGT00950000182970.A.a ENSGT00440000033468.d.a.a ##22 ENSGT00940000166484.b ENSGT00940000158882 ENSGT00860000135714 ENSGT00940000158439 ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 ENSGT00940000155797 ENSGT01050000245374 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o ENSGT00940000157382 ENSGT00390000013520 Cercopithecinae_a ANCESTRAL SPECIES 4 ENSGT00940000154173.A.a.c.b ENSGT00510000046704.a ENSGT00390000018533 ENSGT00940000156673 ENSGT00940000159010 ENSGT00940000158902 ENSGT00950000183166.a.a.a.a ENSGT00390000015991 ENSGT00390000007230 ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000156740 ENSGT00390000013680.b ENSGT00390000011888 ENSGT00950000182970.A.a ENSGT00440000033468.d.a.a ##22 ENSGT00940000166484.b ENSGT00940000158882 ENSGT00860000135714 ENSGT00940000158439 ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 ENSGT00940000155797 ENSGT01050000245374 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o ENSGT00940000157382 ENSGT00390000013520 Macaca ANCESTRAL SPECIES 4 ENSGT00510000046704.a ENSGT00940000154173.A.a.c.b ENSGT00390000018533 ENSGT00940000156673 ENSGT00940000159010 ENSGT00940000158902 ENSGT00950000183166.a.a.a.a ENSGT00390000015991 ENSGT00390000007230 ENSGT00940000157069 ENSGT00940000154203 ENSGT00940000156740 ENSGT00390000013680.b ENSGT00390000011888 ENSGT00950000182970.A.a ENSGT00440000033468.d.a.a ##22 ENSGT00940000158882 ENSGT00860000135714 ENSGT00940000158439 ENSGT00390000006454 ENSGT00940000155672 ENSGT00390000010722 ENSGT00390000003769 ENSGT00940000155797 ENSGT00940000165945 ENSGT00940000155690 ENSGT00390000010822.o ENSGT00940000157382 ENSGT00390000013520 ENSGT00390000009552 ENSGT00840000129887 Pig-tailed macaque MODERN SPECIES 541 ENSMNEG00000038245 SMG8 (ENSMNEG00000044030) GDPD1 (ENSMNEG00000031028) YPEL2 (ENSMNEG00000033354) DHX40 (ENSMNEG00000043921) CLTC (ENSMNEG00000022607) PTRH2 (ENSMNEG00000037063) VMP1 (ENSMNEG00000045570) TUBD1 (ENSMNEG00000020432) RPS6KB1 (ENSMNEG00000045115) RNFT1 (ENSMNEG00000033585) ENSMNEG00000034412 MED13 (ENSMNEG00000042012) INTS2 (ENSMNEG00000035838) BRIP1 (ENSMNEG00000040728) ENSMNEG00000029514 ##22 TBX4 (ENSMNEG00000031407) ENSMNEG00000029116 TBX2 (ENSMNEG00000038002) BCAS3 (ENSMNEG00000030205) PPM1D (ENSMNEG00000033293) APPBP2 (ENSMNEG00000031571) CHCT1 (ENSMNEG00000032058) ENSMNEG00000042038 ENSMNEG00000042229 ENSMNEG00000038726 CA4 (ENSMNEG00000037240) ZNHIT3 (ENSMNEG00000031757) MYO19 (ENSMNEG00000043092) PIGW (ENSMNEG00000010275) GGNBP2 (ENSMNEG00000036757) Vervet Monkey MODERN SPECIES 7 ENSCSAG00000005844 PRR11 (ENSCSAG00000005850) SMG8 (ENSCSAG00000005852) GDPD1 (ENSCSAG00000005854) YPEL2 (ENSCSAG00000005856) DHX40 (ENSCSAG00000005860) CLTC (ENSCSAG00000005869) PTRH2 (ENSCSAG00000000552) VMP1 (ENSCSAG00000005874) TUBD1 (ENSCSAG00000005884) RPS6KB1 (ENSCSAG00000005890) RNFT1 (ENSCSAG00000005893) MED13 (ENSCSAG00000005903) INTS2 (ENSCSAG00000005911) BRIP1 (ENSCSAG00000005928) ENSCSAG00000000553 ##22 TBX4 (ENSCSAG00000005933) TBX2 (ENSCSAG00000005940) ENSCSAG00000005959 PPM1D (ENSCSAG00000005981) APPBP2 (ENSCSAG00000005988) CHCT1 (ENSCSAG00000005993) ENSCSAG00000006004 CA4 (ENSCSAG00000006017) ENSCSAG00000006027 MYO19 (ENSCSAG00000006037) PIGW (ENSCSAG00000000554) GGNBP2 (ENSCSAG00000006044) DHRS11 (ENSCSAG00000006049) MRM1 (ENSCSAG00000006055) LHX1 (ENSCSAG00000006059) Cercopithecinae ANCESTRAL SPECIES ENSGT00440000033468.d.a.b ##22 Vervet Monkey MODERN SPECIES 2 NDUFA4L2 (ENSCSAG00000004922) SHMT2 (ENSCSAG00000004929) NXPH4 (ENSCSAG00000004932) LRP1 (ENSCSAG00000004953) STAT6 (ENSCSAG00000004973) NAB2 (ENSCSAG00000004977) NEMP1 (ENSCSAG00000004982) MYO1A (ENSCSAG00000004990) TAC3 (ENSCSAG00000004995) ZBTB39 (ENSCSAG00000018897) GPR182 (ENSCSAG00000018895) RDH16 (ENSCSAG00000004999) SDR9C7 (ENSCSAG00000005002) HSD17B6 (ENSCSAG00000005007) #20 ENSCSAG00000005015 #21 ENSCSAG00000005018 ##22 ENSCSAG00000005020 ##22 ATP5F1B (ENSCSAG00000005027) #24 BAZ2A (ENSCSAG00000005062) #25 RBMS2 (ENSCSAG00000005074) #27 GLS2 (ENSCSAG00000005081) #28 SPRYD4 (ENSCSAG00000005075) #29 MIP (ENSCSAG00000005087) #30 TIMELESS (ENSCSAG00000005142) APOF (ENSCSAG00000005156) STAT2 (ENSCSAG00000005161) IL23A (ENSCSAG00000005166) PAN2 (ENSCSAG00000005173) CNPY2 (ENSCSAG00000005180) CS (ENSCSAG00000005183) COQ10A (ENSCSAG00000005184) Cercopithecinae ANCESTRAL SPECIES ENSGT00440000033468.d.b ##22 Vervet Monkey MODERN SPECIES 2 SHMT2 (ENSCSAG00000004929) NXPH4 (ENSCSAG00000004932) LRP1 (ENSCSAG00000004953) STAT6 (ENSCSAG00000004973) NAB2 (ENSCSAG00000004977) NEMP1 (ENSCSAG00000004982) MYO1A (ENSCSAG00000004990) TAC3 (ENSCSAG00000004995) ZBTB39 (ENSCSAG00000018897) GPR182 (ENSCSAG00000018895) RDH16 (ENSCSAG00000004999) SDR9C7 (ENSCSAG00000005002) HSD17B6 (ENSCSAG00000005007) #20 ENSCSAG00000005015 #21 ENSCSAG00000005018 ##22 ENSCSAG00000005020 ##22 ATP5F1B (ENSCSAG00000005027) #24 BAZ2A (ENSCSAG00000005062) #25 RBMS2 (ENSCSAG00000005074) #27 GLS2 (ENSCSAG00000005081) #28 SPRYD4 (ENSCSAG00000005075) #29 MIP (ENSCSAG00000005087) #30 TIMELESS (ENSCSAG00000005142) APOF (ENSCSAG00000005156) STAT2 (ENSCSAG00000005161) IL23A (ENSCSAG00000005166) PAN2 (ENSCSAG00000005173) CNPY2 (ENSCSAG00000005180) CS (ENSCSAG00000005183) COQ10A (ENSCSAG00000005184) ANKRD52 (ENSCSAG00000005189) Cercopithecinae_a ANCESTRAL SPECIES ENSGT00440000033468.d.b ##22 Macaca ANCESTRAL SPECIES ENSGT00440000033468.d.b ##22 Macaca_a ANCESTRAL SPECIES ENSGT00440000033468.d.b ##22 Rhesus MODERN SPECIES 2 NXPH4 (ENSMMUG00000021784) LRP1 (ENSMMUG00000021782) STAT6 (ENSMMUG00000017527) NAB2 (ENSMMUG00000017525) NEMP1 (ENSMMUG00000019783) MYO1A (ENSMMUG00000013518) TAC3 (ENSMMUG00000003203) GPR182 (ENSMMUG00000021114) ENSMMUG00000003763 ZBTB39 (ENSMMUG00000043411) RDH16 (ENSMMUG00000060449) SDR9C7 (ENSMMUG00000057714) ENSMMUG00000051454 HSD17B6 (ENSMMUG00000057617) #20 PRIM1 (ENSMMUG00000004522) #21 NACA (ENSMMUG00000003073) ##22 PTGES3 (ENSMMUG00000013766) #23 ATP5F1B (ENSMMUG00000001027) #24 BAZ2A (ENSMMUG00000019332) #25 RBMS2 (ENSMMUG00000019330) #27 SPRYD4 (ENSMMUG00000053986) #29 GLS2 (ENSMMUG00000000860) #28 MIP (ENSMMUG00000010334) #30 TIMELESS (ENSMMUG00000021878) ENSMMUG00000053460 APOF (ENSMMUG00000063898) ENSMMUG00000052144 STAT2 (ENSMMUG00000000803) IL23A (ENSMMUG00000031831) PAN2 (ENSMMUG00000013482) CS (ENSMMUG00000002483) Hominoidea ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Gibbon MODERN SPECIES 22 ETFDH (ENSNLEG00000006389) PPID (ENSNLEG00000006403) FNIP2 (ENSNLEG00000006415) C4orf45 (ENSNLEG00000006432) RAPGEF2 (ENSNLEG00000006434) FSTL5 (ENSNLEG00000006442) ENSNLEG00000006459 NPY1R (ENSNLEG00000006463) ENSNLEG00000030552 TMA16 (ENSNLEG00000029819) MARCHF1 (ENSNLEG00000006467) ENSNLEG00000028234 ENSNLEG00000018928 SMIM31 (ENSNLEG00000036078) ENSNLEG00000006472 ENSNLEG00000033723 ##22 ENSNLEG00000006473 ENSNLEG00000018929 ENSNLEG00000035696 TRIM75 (ENSNLEG00000018930) TMEM192 (ENSNLEG00000006475) KLHL2 (ENSNLEG00000006478) ENSNLEG00000033748 MSMO1 (ENSNLEG00000032156) ENSNLEG00000031432 CPE (ENSNLEG00000006506) ENSNLEG00000034714 ENSNLEG00000028854 TLL1 (ENSNLEG00000006519) SPOCK3 (ENSNLEG00000006528) ANXA10 (ENSNLEG00000006535) Hominidae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Homo/Pan/Gorilla group ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Homo/Pan group ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Pan ANCESTRAL SPECIES 4 ENSGT00390000003290 ENSGT01000000215340 ENSGT00390000007888.c.b.h ENSGT00940000156334 ENSGT00940000158165 ENSGT00390000005848 ENSGT00940000157275 ENSGT00940000154003.A ENSGT01020000230394.e.a.a.b.a.a.b.a.b ENSGT00900000143786 ENSGT00390000014448 ENSGT00940000157983 ENSGT00390000010491 ENSGT00540000070023.d ENSGT00940000155210.a.b ENSGT00440000033468.d ##22 ENSGT00940000156910 ENSGT00510000046843.b ENSGT00430000032851 ENSGT00410000029301 ENSGT00950000182952.C ENSGT00940000158382 ENSGT00940000158177.b ENSGT00940000158968 ENSGT00940000157574 ENSGT00730000111529 ENSGT00950000183107.a.b.a.tb.b ENSGT00940000158686 ENSGT00390000016737.b ENSGT00940000160413 ENSGT00940000158342.b Bonobo MODERN SPECIES 3 NR2C1 (ENSPPAG00000043732) NDUFA12 (ENSPPAG00000014970) TMCC3 (ENSPPAG00000043931) ENSPPAG00000038252 ENSPPAG00000028908 ENSPPAG00000033767 #27 CEP83 (ENSPPAG00000038283) PLXNC1 (ENSPPAG00000041664) ENSPPAG00000033933 ENSPPAG00000031890 ENSPPAG00000030048 SOCS2 (ENSPPAG00000040884) MRPL42 (ENSPPAG00000038254) ENSPPAG00000028330 ENSPPAG00000035362 ENSPPAG00000043536 ##22 EEA1 (ENSPPAG00000041822) ENSPPAG00000044085 ENSPPAG00000043982 BTG1 (ENSPPAG00000043618) DCN (ENSPPAG00000039448) LUM (ENSPPAG00000027479) KERA (ENSPPAG00000042356) EPYC (ENSPPAG00000029056) CCER1 (ENSPPAG00000003461) ENSPPAG00000017362 ATP2B1 (ENSPPAG00000044122) ENSPPAG00000014801 POC1B (ENSPPAG00000030897) DUSP6 (ENSPPAG00000028930) KITLG (ENSPPAG00000031443) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 3 VEZT (ENSPTRG00000005312) ENSPTRG00000043616 FGD6 (ENSPTRG00000005309) NR2C1 (ENSPTRG00000005307) NDUFA12 (ENSPTRG00000005306) TMCC3 (ENSPTRG00000005304) ENSPTRG00000049511 CEP83 (ENSPTRG00000005302) PLXNC1 (ENSPTRG00000005301) ENSPTRG00000047060 CRADD (ENSPTRG00000005300) SOCS2 (ENSPTRG00000005299) MRPL42 (ENSPTRG00000022791) UBE2N (ENSPTRG00000005297) NUDT4 (ENSPTRG00000005296) ENSPTRG00000048686 ##22 EEA1 (ENSPTRG00000005295) PLEKHG7 (ENSPTRG00000005292) C12H12orf74 (ENSPTRG00000033711) ENSPTRG00000029605 BTG1 (ENSPTRG00000050131) DCN (ENSPTRG00000005290) LUM (ENSPTRG00000005289) KERA (ENSPTRG00000005288) EPYC (ENSPTRG00000005287) CCER1 (ENSPTRG00000023775) ENSPTRG00000046703 ATP2B1 (ENSPTRG00000005286) ENSPTRG00000046518 POC1B (ENSPTRG00000005284) DUSP6 (ENSPTRG00000005282) Chimpanzee MODERN SPECIES 3 NDUFA4L2 (ENSPTRG00000045465) SHMT2 (ENSPTRG00000005124) NXPH4 (ENSPTRG00000005123) LRP1 (ENSPTRG00000005122) STAT6 (ENSPTRG00000005121) NAB2 (ENSPTRG00000005120) NEMP1 (ENSPTRG00000005119) MYO1A (ENSPTRG00000005118) TAC3 (ENSPTRG00000048234) ZBTB39 (ENSPTRG00000044060) ENSPTRG00000047240 GPR182 (ENSPTRG00000005114) RDH16 (ENSPTRG00000005113) SDR9C7 (ENSPTRG00000005112) PRIM1 (ENSPTRG00000022987) #21 ENSPTRG00000049588 ##22 PTGES3 (ENSPTRG00000005108) #23 ATP5F1B (ENSPTRG00000005107) #24 BAZ2A (ENSPTRG00000005106) #25 RBMS2 (ENSPTRG00000005104) #27 ENSPTRG00000043291 GLS2 (ENSPTRG00000005101) #28 SPRYD4 (ENSPTRG00000005100) #29 MIP (ENSPTRG00000005099) #30 TIMELESS (ENSPTRG00000022963) APOF (ENSPTRG00000005096) STAT2 (ENSPTRG00000005095) IL23A (ENSPTRG00000005093) PAN2 (ENSPTRG00000052054) CNPY2 (ENSPTRG00000046892) CS (ENSPTRG00000005090) Tarsier DUPLICATION Tarsier MODERN SPECIES 674 ENSTSYG00000028737 ##22 ENSTSYG00000027913 TAS2R39 (ENSTSYG00000034624) Tarsier MODERN SPECIES 5999 ENSTSYG00000028875 CARD8 (ENSTSYG00000007210) ENSTSYG00000009333 ##22 ENSTSYG00000008342 Strepsirrhini ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Lemuriformes ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Mouse lemur MODERN SPECIES 21 ENSMICG00000043784 MAPK10 (ENSMICG00000014359) ARHGAP24 (ENSMICG00000028999) WDFY3 (ENSMICG00000004962) ENSMICG00000047148 ##22 ENSMICG00000000970 NKX6-1 (ENSMICG00000042480) ENSMICG00000005904 ENSMICG00000047779 TAFA4 (ENSMICG00000042440) EOGT (ENSMICG00000047274) TMF1 (ENSMICG00000035913) ENSMICG00000003407 ENSMICG00000042511 ENSMICG00000046450 FRMD4B (ENSMICG00000045910) PROP1 (ENSMICG00000027568) ZNF354B (ENSMICG00000035274) TRIM52 (ENSMICG00000043353) RACK1 (ENSMICG00000014201) Lemuriformes_a ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Greater bamboo lemur DUPLICATION Greater bamboo lemur MODERN SPECIES 967 ENSPSMG00000006054 ##22 ENSPSMG00000006057 IGFL1 (ENSPSMG00000006068) HIF3A (ENSPSMG00000006129) PPP5C (ENSPSMG00000006234) PNMA8A (ENSPSMG00000006391) PNMA8C (ENSPSMG00000006395) PNMA8B (ENSPSMG00000006398) CALM3 (ENSPSMG00000006412) PTGIR (ENSPSMG00000006434) GNG8 (ENSPSMG00000006435) DACT3 (ENSPSMG00000006455) PRKD2 (ENSPSMG00000006485) STRN4 (ENSPSMG00000006556) FKRP (ENSPSMG00000006706) SLC1A5 (ENSPSMG00000006768) Greater bamboo lemur MODERN SPECIES 71 ENSPSMG00000007303 ENSPSMG00000007292 GK5 (ENSPSMG00000007275) ENSPSMG00000007251 ENSPSMG00000007238 ENSPSMG00000007236 ##22 XRN1 (ENSPSMG00000007127) ATR (ENSPSMG00000006948) PLS1 (ENSPSMG00000006858) TRPC1 (ENSPSMG00000006833) ENSPSMG00000006785 PCOLCE2 (ENSPSMG00000006776) PAQR9 (ENSPSMG00000006758) U2SURP (ENSPSMG00000006545) CHST2 (ENSPSMG00000006433) SLC9A9 (ENSPSMG00000006417) DIPK2A (ENSPSMG00000006404) Euarchontoglires_A DUPLICATION Euarchontoglires_A DUPLICATION Euarchontoglires_A ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Glires ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Rodentia ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Myomorpha ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Muroidea ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Cricetidae ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Cricetinae ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Chinese hamster chok1gshd MODERN SPECIES 1 Ufsp2 (ENSCGRG00001016637) 1700029J07Rik (ENSCGRG00001013769) Ccdc110 (ENSCGRG00001005516) Pdlim3 (ENSCGRG00001008240) Sorbs2 (ENSCGRG00001012795) Tlr3 (ENSCGRG00001014027) Fam149a (ENSCGRG00001012179) Cyp4v3 (ENSCGRG00001013032) Klkb1 (ENSCGRG00001013789) F11 (ENSCGRG00001014058) ENSCGRG00001024702 Mtnr1a (ENSCGRG00001002715) Fat1 (ENSCGRG00001020269) ENSCGRG00001006783 ENSCGRG00001008161 ENSCGRG00001023820 ##22 Zfp42 (ENSCGRG00001024253) Triml2 (ENSCGRG00001000515) Triml1 (ENSCGRG00001014182) Frg1 (ENSCGRG00001014998) Asah1 (ENSCGRG00001018918) Pcm1 (ENSCGRG00001020402) Fgl1 (ENSCGRG00001023635) ENSCGRG00001024241 Pdgfrl (ENSCGRG00001024745) Slc7a2 (ENSCGRG00001017279) ENSCGRG00001014016 Adam24 (ENSCGRG00001004936) Mtmr7 (ENSCGRG00001021013) Vps37a (ENSCGRG00001011654) Cnot7 (ENSCGRG00001011174) Rodentia_A ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Sciuridae ANCESTRAL SPECIES ENSGT00440000033468.d.i.a ##22 Eurasian red squirrel MODERN SPECIES 156 KLHL4 (ENSSVLG00005023401) DACH2 (ENSSVLG00005023583) ENSSVLG00005023891 POF1B (ENSSVLG00005023983) ZNF711 (ENSSVLG00005024106) ENSSVLG00005024140 ENSSVLG00005024204 APOOL (ENSSVLG00005024251) ENSSVLG00005024287 ENSSVLG00005024295 ENSSVLG00005024315 HDX (ENSSVLG00005024346) RPS6KA6 (ENSSVLG00005024442) CYLC1 (ENSSVLG00005024602) POU3F4 (ENSSVLG00005024640) ENSSVLG00005024677 ##22 ENSSVLG00005010323 ENSSVLG00005010356 ENSSVLG00005010369 SH3BGRL (ENSSVLG00005010419) ENSSVLG00005010444 BRWD3 (ENSSVLG00005010574) ENSSVLG00005010912 TENT5D (ENSSVLG00005010945) ENSSVLG00005010961 ENSSVLG00005010993 TBX22 (ENSSVLG00005011035) ITM2A (ENSSVLG00005011136) GPR174 (ENSSVLG00005011269) ENSSVLG00005011291 P2RY10 (ENSSVLG00005011313) Tree shrew MODERN SPECIES 9342 ENSTBEG00000011329 ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Glires ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Lagomorpha ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Rabbit MODERN SPECIES 6 ENSOCUG00000009004 PCDH18 (ENSOCUG00000009057) ENSOCUG00000032687 ENSOCUG00000026992 ENSOCUG00000030197 ENSOCUG00000035926 ENSOCUG00000036673 ENSOCUG00000038661 PABPC4L (ENSOCUG00000028226) ENSOCUG00000033772 PRSS12 (ENSOCUG00000013625) NDST3 (ENSOCUG00000009952) ENSOCUG00000038669 TRAM1L1 (ENSOCUG00000003846) ENSOCUG00000003691 ENSOCUG00000002295 ##22 NDST4 (ENSOCUG00000007796) UGT8 (ENSOCUG00000015037) ENSOCUG00000030939 CAMK2D (ENSOCUG00000023650) ENSOCUG00000035520 ANK2 (ENSOCUG00000010618) ENSOCUG00000021222 LARP7 (ENSOCUG00000007073) ZGRF1 (ENSOCUG00000007057) NEUROG2 (ENSOCUG00000007063) ENSOCUG00000010848 ALPK1 (ENSOCUG00000024991) TIFA (ENSOCUG00000017578) AP1AR (ENSOCUG00000004413) FAM241A (ENSOCUG00000011383) Rodentia ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Rodentia_B ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Myomorpha ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Muroidea ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Cricetidae ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Cricetinae ANCESTRAL SPECIES ENSGT00440000033468.d.i.b ##22 Chinese hamster chok1gshd MODERN SPECIES 2 Ankmy2 (ENSCGRG00001009172) ENSCGRG00001013113 Tspan13 (ENSCGRG00001023940) Agr2 (ENSCGRG00001001104) Agr3 (ENSCGRG00001002325) Ahr (ENSCGRG00001005179) ENSCGRG00001007669 Snx13 (ENSCGRG00001000684) Prps1l1 (ENSCGRG00001011587) Hdac9 (ENSCGRG00001012600) ENSCGRG00001016294 ENSCGRG00001014414 Twist1 (ENSCGRG00001010741) Ferd3l (ENSCGRG00001003018) ENSCGRG00001021716 ENSCGRG00001022667 ##22 Euarchontoglires_A ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Glires ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Rodentia ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Rodentia_A ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Hystricomorpha ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Naked mole-rat female DUPLICATION Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 25 ENSHGLG00000049940 SMIM31 (ENSHGLG00000004408) ENSHGLG00000010125 ENSHGLG00000020521 TRIM60 (ENSHGLG00000044107) ENSHGLG00000042682 TMEM192 (ENSHGLG00000042804) KLHL2 (ENSHGLG00000006484) ENSHGLG00000005109 CPE (ENSHGLG00000044272) ENSHGLG00000050964 ENSHGLG00000038708 ENSHGLG00000041799 ENSHGLG00000043287 ENSHGLG00000006655 ENSHGLG00000049226 ##22 ENSHGLG00000034446 ENSHGLG00000047271 ENSHGLG00000039306 ENSHGLG00000035113 ANXA10 (ENSHGLG00000001262) ENSHGLG00000050525 ENSHGLG00000013790 ENSHGLG00000034493 PALLD (ENSHGLG00000015506) ENSHGLG00000032370 SH3RF1 (ENSHGLG00000016975) NEK1 (ENSHGLG00000012517) CLCN3 (ENSHGLG00000007901) HPF1 (ENSHGLG00000009625) ENSHGLG00000047060 Naked mole-rat female MODERN SPECIES 31 ENSHGLG00000041421 BRWD3 (ENSHGLG00000002063) ENSHGLG00000037295 ENSHGLG00000007722 ENSHGLG00000007062 ENSHGLG00000020488 ENSHGLG00000020202 ENSHGLG00000005940 ENSHGLG00000050061 ENSHGLG00000050316 ENSHGLG00000040597 ENSHGLG00000037398 RPS6KA6 (ENSHGLG00000004511) HDX (ENSHGLG00000003945) ENSHGLG00000045926 ENSHGLG00000035970 ##22 APOOL (ENSHGLG00000003635) ENSHGLG00000003516 ZNF711 (ENSHGLG00000003254) POF1B (ENSHGLG00000003095) ENSHGLG00000033497 ENSHGLG00000041349 CHM (ENSHGLG00000002772) DACH2 (ENSHGLG00000008869) ENSHGLG00000020892 ENSHGLG00000034462 ENSHGLG00000002543 ENSHGLG00000049697 ENSHGLG00000014839 ENSHGLG00000046264 ENSHGLG00000000569 Naked mole-rat female MODERN SPECIES 3 ENSHGLG00000004959 ENSHGLG00000011793 ENSHGLG00000005602 ENSHGLG00000000210 ENSHGLG00000035491 ENSHGLG00000041847 ENSHGLG00000006616 ENSHGLG00000020314 ENSHGLG00000008650 ENSHGLG00000034314 CDKN2B (ENSHGLG00000038311) ENSHGLG00000040016 DMRTA1 (ENSHGLG00000051021) ELAVL2 (ENSHGLG00000005423) ENSHGLG00000047261 ENSHGLG00000001616 ##22 ENSHGLG00000020416 TUSC1 (ENSHGLG00000039095) ENSHGLG00000036016 ENSHGLG00000034551 PLAA (ENSHGLG00000010977) LRRC19 (ENSHGLG00000040675) ENSHGLG00000032796 IFT74 (ENSHGLG00000007564) ENSHGLG00000037234 TEK (ENSHGLG00000017418) MOB3B (ENSHGLG00000005405) ENSHGLG00000020201 ENSHGLG00000008527 ENSHGLG00000039277 ENSHGLG00000039388 Rodentia_B ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Myomorpha ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Muroidea ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Muroidea_A ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Cricetidae ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Cricetinae ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Golden Hamster MODERN SPECIES 622 Lrtm2 (ENSMAUG00000018872) Cacna2d4 (ENSMAUG00000010863) Adipor2 (ENSMAUG00000009923) Wnt5b (ENSMAUG00000021552) Erc1 (ENSMAUG00000004622) Rad52 (ENSMAUG00000017264) ENSMAUG00000004175 ENSMAUG00000014503 Ninj2 (ENSMAUG00000014145) B4galnt3 (ENSMAUG00000009442) ENSMAUG00000016800 Ccdc77 (ENSMAUG00000015602) ENSMAUG00000012905 Il17ra (ENSMAUG00000021439) Hdhd5 (ENSMAUG00000000662) ENSMAUG00000015523 ##22 Cecr2 (ENSMAUG00000019396) Slc25a18 (ENSMAUG00000006541) Atp6v1e1 (ENSMAUG00000010551) Bcl2l13 (ENSMAUG00000001418) ENSMAUG00000016061 ENSMAUG00000010804 Pex26 (ENSMAUG00000021306) Tuba8 (ENSMAUG00000016003) ENSMAUG00000010948 Slc6a13 (ENSMAUG00000002527) Slc6a12 (ENSMAUG00000016005) Iqsec3 (ENSMAUG00000014844) A2m (ENSMAUG00000016738) ENSMAUG00000017104 ENSMAUG00000010289 Lesser Egyptian jerboa MODERN SPECIES 112 Tmem98 (ENSJJAG00000017013) Spaca3 (ENSJJAG00000023074) ENSJJAG00000022033 Asic2 (ENSJJAG00000016957) Ccl12 (ENSJJAG00000003016) ENSJJAG00000016181 Tmem132e (ENSJJAG00000018290) Cct6b (ENSJJAG00000014826) Zfp830 (ENSJJAG00000010210) Lig3 (ENSJJAG00000003848) Rffl (ENSJJAG00000020929) Rad51d (ENSJJAG00000014931) Fndc8 (ENSJJAG00000018336) Nle1 (ENSJJAG00000008356) Unc45b (ENSJJAG00000018066) ENSJJAG00000016743 ##22 ENSJJAG00000020087 ENSJJAG00000024250 ENSJJAG00000018288 Slfn14 (ENSJJAG00000016028) ENSJJAG00000008010 Ap2b1 (ENSJJAG00000023688) Rasl10b (ENSJJAG00000011469) ENSJJAG00000020015 1700020L24Rik (ENSJJAG00000011369) Mmp28 (ENSJJAG00000009319) Taf15 (ENSJJAG00000010606) Heatr9 (ENSJJAG00000012557) Ccl5 (ENSJJAG00000024069) Ccl3 (ENSJJAG00000022032) Ccl4 (ENSJJAG00000011404) Lagomorpha ANCESTRAL SPECIES ENSGT00440000033468.d.j ##22 Rabbit DUPLICATION Rabbit MODERN SPECIES 9 ENSOCUG00000029316 ENSOCUG00000035024 ENSOCUG00000027361 ENSOCUG00000011354 ENSOCUG00000038810 ENSOCUG00000033019 ENSOCUG00000030221 ENSOCUG00000035303 ENSOCUG00000034459 ENSOCUG00000024510 ENSOCUG00000033921 ENSOCUG00000031416 ENSOCUG00000034049 ENSOCUG00000032917 ENSOCUG00000029733 ENSOCUG00000010552 ##22 ENSOCUG00000026637 ENSOCUG00000038198 ENSOCUG00000036428 ENSOCUG00000037482 ENSOCUG00000021588 ENSOCUG00000027147 ENSOCUG00000025363 ENSOCUG00000029654 ENSOCUG00000026012 ENSOCUG00000029758 ENSOCUG00000022083 ENSOCUG00000030276 ENSOCUG00000029159 ENSOCUG00000029476 ENSOCUG00000028023 Rabbit MODERN SPECIES 1154 ENSOCUG00000003678 ##22 Laurasiatheria ANCESTRAL SPECIES 6 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000162028 #20 ENSGT00940000161764 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Eulipotyphla ANCESTRAL SPECIES 2351 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 Common shrew MODERN SPECIES 6380 PRIM1 (ENSSARG00000001610) #21 ENSSARG00000001573 ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Laurasiatheria_c ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Equus ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Donkey MODERN SPECIES 14 ZBTB39 (ENSEASG00005025709) GPR182 (ENSEASG00005036945) ENSEASG00005034579 #20 ENSEASG00005006331 ENSEASG00005006326 #20 ENSEASG00005006334 ENSEASG00005031913 ENSEASG00005006346 ENSEASG00005006329 #20 ENSEASG00005025949 ENSEASG00005006341 SDR9C7 (ENSEASG00005006337) ENSEASG00005032791 HSD17B6 (ENSEASG00005027419) #20 PRIM1 (ENSEASG00005006308) #21 ENSEASG00005035244 ##22 PTGES3 (ENSEASG00005006299) #23 ATP5F1B (ENSEASG00005006269) #24 ENSEASG00005035823 #25 RBMS2 (ENSEASG00005005834) #27 ENSEASG00005006215 #25 GLS2 (ENSEASG00005005782) #28 SPRYD4 (ENSEASG00005037318) #29 MIP (ENSEASG00005005765) #30 TIMELESS (ENSEASG00005005617) APOF (ENSEASG00005026252) STAT2 (ENSEASG00005005423) IL23A (ENSEASG00005035882) PAN2 (ENSEASG00005005235) CNPY2 (ENSEASG00005005179) CS (ENSEASG00005005030) Chiroptera ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Microchiroptera ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Greater horseshoe bat DUPLICATION Greater horseshoe bat MODERN SPECIES 1 NDUFA4L2 (ENSRFEG00010013025) SHMT2 (ENSRFEG00010012928) NXPH4 (ENSRFEG00010012875) LRP1 (ENSRFEG00010011635) STAT6 (ENSRFEG00010011526) NAB2 (ENSRFEG00010011442) ENSRFEG00010011417 NEMP1 (ENSRFEG00010011322) MYO1A (ENSRFEG00010011248) TAC3 (ENSRFEG00010011154) ZBTB39 (ENSRFEG00010011129) GPR182 (ENSRFEG00010011107) RDH16 (ENSRFEG00010010987) SDR9C7 (ENSRFEG00010010912) PRIM1 (ENSRFEG00010010857) #21 ENSRFEG00010010764 ##22 ENSRFEG00010010712 ENSRFEG00010010659 #23 ATP5F1B (ENSRFEG00010010570) #24 BAZ2A (ENSRFEG00010009982) #25 RBMS2 (ENSRFEG00010009809) #27 GLS2 (ENSRFEG00010009734) #28 SPRYD4 (ENSRFEG00010009705) #29 ENSRFEG00010009680 MIP (ENSRFEG00010009638) #30 TIMELESS (ENSRFEG00010009600) APOF (ENSRFEG00010009558) STAT2 (ENSRFEG00010009437) IL23A (ENSRFEG00010009379) PAN2 (ENSRFEG00010009344) CS (ENSRFEG00010009145) Greater horseshoe bat MODERN SPECIES 2 ENSRFEG00010018641 TH (ENSRFEG00010018664) ASCL2 (ENSRFEG00010018749) ENSRFEG00010018769 CD81 (ENSRFEG00010018819) ENSRFEG00010018863 TRPM5 (ENSRFEG00010018900) KCNQ1 (ENSRFEG00010018942) CDKN1C (ENSRFEG00010019122) SLC22A18 (ENSRFEG00010019147) PHLDA2 (ENSRFEG00010019209) NAP1L4 (ENSRFEG00010019235) CARS1 (ENSRFEG00010019344) ENSRFEG00010019461 OSBPL5 (ENSRFEG00010019508) ENSRFEG00010019649 ##22 ENSRFEG00010019667 MRGPRG (ENSRFEG00010019682) ENSRFEG00010019689 NADSYN1 (ENSRFEG00010019709) DHCR7 (ENSRFEG00010019782) SHANK2 (ENSRFEG00010019833) CTTN (ENSRFEG00010020070) PPFIA1 (ENSRFEG00010020279) FADD (ENSRFEG00010020342) ANO1 (ENSRFEG00010020393) FGF3 (ENSRFEG00010020546) FGF4 (ENSRFEG00010020567) FGF19 (ENSRFEG00010020594) LTO1 (ENSRFEG00010020618) CCND1 (ENSRFEG00010020663) Carnivora ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Caniformia ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Canidae ANCESTRAL SPECIES 44 ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT01050000245459 ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Canis_lupus ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Dog MODERN SPECIES 1 NDUFA4L2 (ENSCAFG00845010422) SHMT2 (ENSCAFG00845010365) NXPH4 (ENSCAFG00845010342) LRP1 (ENSCAFG00845010106) STAT6 (ENSCAFG00845009828) NAB2 (ENSCAFG00845009686) NEMP1 (ENSCAFG00845009633) TAC3 (ENSCAFG00845009491) ENSCAFG00845009429 ZBTB39 (ENSCAFG00845009407) GPR182 (ENSCAFG00845009393) RDH16 (ENSCAFG00845009333) SDR9C7 (ENSCAFG00845009288) HSD17B6 (ENSCAFG00845009238) #20 PRIM1 (ENSCAFG00845009163) #21 NACA (ENSCAFG00845009133) ##22 ATP5F1B (ENSCAFG00845008893) #24 RBMS2 (ENSCAFG00845008621) #27 ENSCAFG00845008578 GLS2 (ENSCAFG00845008418) #28 SPRYD4 (ENSCAFG00845008355) #29 ENSCAFG00845008341 MIP (ENSCAFG00845008298) #30 TIMELESS (ENSCAFG00845008229) APOF (ENSCAFG00845008198) STAT2 (ENSCAFG00845008098) IL23A (ENSCAFG00845008036) PAN2 (ENSCAFG00845007965) CNPY2 (ENSCAFG00845007911) CS (ENSCAFG00845007644) COQ10A (ENSCAFG00845007484) Red fox MODERN SPECIES 38 SHMT2 (ENSVVUG00000018132) NXPH4 (ENSVVUG00000018138) LRP1 (ENSVVUG00000018159) STAT6 (ENSVVUG00000018501) NAB2 (ENSVVUG00000019302) NEMP1 (ENSVVUG00000019316) MYO1A (ENSVVUG00000019418) ENSVVUG00000020802 ZBTB39 (ENSVVUG00000020803) GPR182 (ENSVVUG00000020804) ENSVVUG00000020807 #20 ENSVVUG00000020809 SDR9C7 (ENSVVUG00000020813) HSD17B6 (ENSVVUG00000020818) #20 PRIM1 (ENSVVUG00000020823) #21 ENSVVUG00000020829 ##22 ENSVVUG00000020831 #23 ATP5F1B (ENSVVUG00000020852) #24 BAZ2A (ENSVVUG00000020881) #25 RBMS2 (ENSVVUG00000021554) #27 GLS2 (ENSVVUG00000021555) #28 SPRYD4 (ENSVVUG00000021557) #29 ENSVVUG00000021558 MIP (ENSVVUG00000021559) #30 TIMELESS (ENSVVUG00000021563) STAT2 (ENSVVUG00000021580) IL23A (ENSVVUG00000021877) PAN2 (ENSVVUG00000021878) CNPY2 (ENSVVUG00000021880) CS (ENSVVUG00000021881) COQ10A (ENSVVUG00000021958) Caniformia_b ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Mustelinae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 American mink MODERN SPECIES 28 FLRT3 (ENSNVIG00000017394) ENSNVIG00000017400 SEL1L2 (ENSNVIG00000017421) NDUFAF5 (ENSNVIG00000017538) ESF1 (ENSNVIG00000017569) TASP1 (ENSNVIG00000017586) ISM1 (ENSNVIG00000017629) SPTC3 (ENSNVIG00000017652) BTBD3 (ENSNVIG00000017698) ENSNVIG00000017739 JAG1 (ENSNVIG00000017758) MKKS (ENSNVIG00000017843) SNAP25 (ENSNVIG00000017860) ENSNVIG00000017897 ##22 ANKEF1 (ENSNVIG00000017906) ENSNVIG00000017920 PAK7 (ENSNVIG00000017934) LAMP5 (ENSNVIG00000017969) PLCB4 (ENSNVIG00000018037) PLCB1 (ENSNVIG00000018320) TMX4 (ENSNVIG00000018532) HAO1 (ENSNVIG00000018550) BMP2 (ENSNVIG00000018558) FERMT1 (ENSNVIG00000018576) LRRN4 (ENSNVIG00000018602) CRLS1 (ENSNVIG00000018610) MCM8 (ENSNVIG00000018649) TRM6 (ENSNVIG00000018778) CHGB (ENSNVIG00000018787) Ursidae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Ursus ANCESTRAL SPECIES ENSGT00440000033468.d ##22 American black bear MODERN SPECIES 6076 ENSUAMG00000012623 ##22 Giant Panda MODERN SPECIES 1040 ENSAMEG00000027235 ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Suina ANCESTRAL SPECIES 4 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00390000000335 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.b ENSGT00940000162028.a.a #20 ENSGT00940000161764 ENSGT00940000162028.b #20 ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00440000033468.c.a ##22 ENSGT00940000154256 #23 ENSGT00550000074800.u #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00390000010463.a.a.a #28 ENSGT00940000159780 #29 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104.h ENSGT00500000045104.g ENSGT01050000244905.C ENSGT00390000006482 ENSGT00390000013978.d ENSGT00940000161158 Chacoan peccary MODERN SPECIES 204 IL5 (ENSCWAG00000000297) RAD50 (ENSCWAG00000000310) IL13 (ENSCWAG00000000347) IL4 (ENSCWAG00000000368) KIF3A (ENSCWAG00000000413) SEPTIN8 (ENSCWAG00000000563) SOWAHA (ENSCWAG00000000597) SHROOM1 (ENSCWAG00000000622) GDF9 (ENSCWAG00000000656) UQCRQ (ENSCWAG00000000670) LEAP2 (ENSCWAG00000000679) AFF4 (ENSCWAG00000000699) ZCCHC10 (ENSCWAG00000000742) HSPA4 (ENSCWAG00000000776) FSTL4 (ENSCWAG00000000828) ENSCWAG00000000888 ##22 C5orf15 (ENSCWAG00000000899) VDAC1 (ENSCWAG00000000911) TCF7 (ENSCWAG00000000966) SKP1 (ENSCWAG00000001228) PPP2CA (ENSCWAG00000001252) CDKL3 (ENSCWAG00000001280) UBE2B (ENSCWAG00000001325) CDKN2AIPNL (ENSCWAG00000001332) JADE2 (ENSCWAG00000001373) SAR1B (ENSCWAG00000001466) SEC24A (ENSCWAG00000001484) CAMLG (ENSCWAG00000001526) DDX46 (ENSCWAG00000001555) ENSCWAG00000001585 C5orf24 (ENSCWAG00000001594) Pig MODERN SPECIES 13 STAT6 (ENSSSCG00000040435) NAB2 (ENSSSCG00000000411) NEMP1 (ENSSSCG00000025542) MYO1A (ENSSSCG00000000413) TAC3 (ENSSSCG00000055762) ZBTB39 (ENSSSCG00000037617) GPR182 (ENSSSCG00000037701) ENSSSCG00000000419 ENSSSCG00000052399 ENSSSCG00000052944 RDH16 (ENSSSCG00000052675) SDR9C7 (ENSSSCG00000000415) ENSSSCG00000031735 HSD17B6 (ENSSSCG00000027854) #20 PRIM1 (ENSSSCG00000026055) #21 ENSSSCG00000020830 ##22 PTGES3 (ENSSSCG00000000406) #23 ENSSSCG00000000405 #24 BAZ2A (ENSSSCG00000000403) #25 ENSSSCG00000063415 RBMS2 (ENSSSCG00000000402) #27 GLS2 (ENSSSCG00000000401) #28 SPRYD4 (ENSSSCG00000028066) #29 MIP (ENSSSCG00000000400) #30 TIMELESS (ENSSSCG00000000399) APOF (ENSSSCG00000000398) STAT2 (ENSSSCG00000000396) IL23A (ENSSSCG00000033520) PAN2 (ENSSSCG00000000393) CNPY2 (ENSSSCG00000000394) CS (ENSSSCG00000035686) Artiodactyla_a ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Pecora ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Percora_a ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Bovidae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Caprinae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Goat DUPLICATION Goat MODERN SPECIES 24 NEMP1 (ENSCHIG00000015757) MYO1A (ENSCHIG00000011774) TAC3 (ENSCHIG00000026341) ZBTB39 (ENSCHIG00000001253) GPR182 (ENSCHIG00000008110) ENSCHIG00000012307 ENSCHIG00000024299 ENSCHIG00000010628 ENSCHIG00000025887 ENSCHIG00000022462 SDR9C7 (ENSCHIG00000026773) ENSCHIG00000008219 ENSCHIG00000027068 HSD17B6 (ENSCHIG00000012163) #20 PRIM1 (ENSCHIG00000026915) #21 ENSCHIG00000013646 ##22 ENSCHIG00000011269 #23 ATP5F1B (ENSCHIG00000010757) #24 BAZ2A (ENSCHIG00000025797) #25 RBMS2 (ENSCHIG00000020791) #27 ENSCHIG00000017636 GLS2 (ENSCHIG00000009891) #28 SPRYD4 (ENSCHIG00000021196) #29 MIP (ENSCHIG00000013963) #30 TIMELESS (ENSCHIG00000010689) ENSCHIG00000002500 APOF (ENSCHIG00000022892) STAT2 (ENSCHIG00000016058) IL23A (ENSCHIG00000010965) PAN2 (ENSCHIG00000026935) CNPY2 (ENSCHIG00000011857) Goat MODERN SPECIES 22 TRABD2B (ENSCHIG00000016346) ENSCHIG00000008212 FOXD2 (ENSCHIG00000000964) FOXE3 (ENSCHIG00000005171) CMPK1 (ENSCHIG00000009857) STIL (ENSCHIG00000018306) TAL1 (ENSCHIG00000023704) PDZK1IP1 (ENSCHIG00000010100) CYP4X1 (ENSCHIG00000017002) CYP4A42 (ENSCHIG00000025289) ENSCHIG00000022081 ENSCHIG00000002358 ENSCHIG00000017193 CYP4A41 (ENSCHIG00000013010) ENSCHIG00000008252 ENSCHIG00000006577 ##22 CYP4B1 (ENSCHIG00000010220) EFCAB14 (ENSCHIG00000021934) TEX38 (ENSCHIG00000019654) ENSCHIG00000024752 MOB3C (ENSCHIG00000017303) MKNK1 (ENSCHIG00000025017) KNCN (ENSCHIG00000012933) DMBX1 (ENSCHIG00000018374) FAAH (ENSCHIG00000022289) NSUN4 (ENSCHIG00000024189) ENSCHIG00000013936 LRRC41 (ENSCHIG00000027187) RAD54L (ENSCHIG00000020118) LURAP1 (ENSCHIG00000013931) POMGNT1 (ENSCHIG00000014882) Sauria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Archelosauria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Archosauria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Australian saltwater crocodile MODERN SPECIES JMJD4 (ENSCPRG00005002616) ALS2CL (ENSCPRG00005002624) ENSCPRG00005002674 MYL3 (ENSCPRG00005002730) PTH1R (ENSCPRG00005002800) ENSCPRG00005002835 NBEAL2 (ENSCPRG00005002905) ENSCPRG00005002928 ENSCPRG00005002930 ENSCPRG00005002936 ENSCPRG00005002971 ENSCPRG00005002987 KLHL18 (ENSCPRG00005002997) ENSCPRG00005002999 ENSCPRG00005003002 ENSCPRG00005003007 ##22 CCM2 (ENSCPRG00005003010) ENSCPRG00005003021 ENSCPRG00005003076 ENSCPRG00005003125 ENSCPRG00005003126 GARS1 (ENSCPRG00005003127) CTDSPL (ENSCPRG00005003172) VILL (ENSCPRG00005003212) PLCD1 (ENSCPRG00005003264) ENSCPRG00005003275 DLEC1 (ENSCPRG00005003285) ACAA1 (ENSCPRG00005003330) ENSCPRG00005003351 MYD88 (ENSCPRG00005003358) OXSR1 (ENSCPRG00005003415) Aves ANCESTRAL SPECIES ENSGT00440000033468.d ##22 African ostrich MODERN SPECIES 774 ZBTB39 (ENSSCUG00000010505) GPR182 (ENSSCUG00000010507) ENSSCUG00000010508 ENSSCUG00000010509 ENSSCUG00000010510 ##22 PTGES3 (ENSSCUG00000010513) #23 ATP5F1B (ENSSCUG00000010522) #24 ENSSCUG00000010533 #25 ENSSCUG00000010535 #25 TIMELESS (ENSSCUG00000010541) PAN2 (ENSSCUG00000010551) ANKRD52 (ENSSCUG00000010638) RNF41 (ENSSCUG00000010720) Neognathae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Neognathae_b ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Passeriformes ANCESTRAL SPECIES 42 ENSGT00950000183092.a ENSGT00940000161040 ENSGT00390000002762.a.a ENSGT00950000182883.b.a.b ENSGT00940000157899.b ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d.a ENSGT00940000154118.a.b.c ENSGT00390000011466 #21 ENSGT00440000033468.c.a ##22 ENSGT00440000033468.d ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 ENSGT00940000155250 #27 ENSGT00940000156260 #30 ENSGT00390000015124 ENSGT00500000045104 ENSGT01050000244905.C.g ENSGT01050000246713 ENSGT00390000013978.d ENSGT00940000164642 ENSGT00390000006813 ENSGT00940000160056 ENSGT00950000182908.B ENSGT00940000161155 Great tit MODERN SPECIES 267 R3HDM2 (ENSPMJG00000005215) STAC3 (ENSPMJG00000005210) ENSPMJG00000005207 SHMT2 (ENSPMJG00000005201) NXPH4 (ENSPMJG00000005196) STAT6 (ENSPMJG00000005062) NAB2 (ENSPMJG00000005060) NEMP1 (ENSPMJG00000005059) MYO1A (ENSPMJG00000005052) ENSPMJG00000005051 ZBTB39 (ENSPMJG00000005049) GPR182 (ENSPMJG00000005048) ENSPMJG00000005046 ENSPMJG00000005045 PRIM1 (ENSPMJG00000005044) #21 ENSPMJG00000005040 ##22 PTGES3 (ENSPMJG00000005037) #23 ATP5F1B (ENSPMJG00000005034) #24 ENSPMJG00000005028 #25 Passeriformes_d ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Passeriformes_g ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Passeroidea ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Common canary MODERN SPECIES 272 ENSSCAG00000006947 ##22 PTGES3 (ENSSCAG00000006943) #23 ATP5F1B (ENSSCAG00000006933) #24 Galloanserae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Anatidae ANCESTRAL SPECIES 101 ENSGT00940000157899.b.c ENSGT01080000257420.C.b.a ENSGT00390000006330.a.b ENSGT00390000002174.a ENSGT00940000160660 ENSGT00940000160722 ENSGT00940000154307.D ENSGT00940000154118.a.b.d ENSGT00940000154118.b ENSGT00390000011466 #21 ENSGT00440000033468.d ##22 ENSGT00940000154256 #23 ENSGT00550000074800 #24 ENSGT00940000159490 #25 Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 452 LRP1 (ENSABRG00000018115) STAT6 (ENSABRG00000018169) NAB2 (ENSABRG00000018178) ENSABRG00000018183 MYO1A (ENSABRG00000018193) ZBTB39 (ENSABRG00000018230) GPR182 (ENSABRG00000018233) ENSABRG00000018237 ENSABRG00000018243 PRIM1 (ENSABRG00000018252) #21 ENSABRG00000018272 ##22 PTGES3 (ENSABRG00000018276) #23 ATP5F1B (ENSABRG00000018281) #24 BAZ2A (ENSABRG00000018356) #25 Pink-footed goose MODERN SPECIES 334 ENSABRG00000004068 ##22 CCM2 (ENSABRG00000004086) ENSABRG00000004097 MYO1G (ENSABRG00000004138) PTPN23 (ENSABRG00000004194) SCAP (ENSABRG00000005055) ENSABRG00000005087 ELP6 (ENSABRG00000005099) CSPG5 (ENSABRG00000005110) SMARCC1 (ENSABRG00000005118) DHX30 (ENSABRG00000005144) ENSABRG00000005168 ENSABRG00000005187 CDC25A (ENSABRG00000005264) ENSABRG00000005279 ENSABRG00000005285 Duck MODERN SPECIES 1985 ENSAPLG00000009052 ##22 Phasianidae ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Japanese quail MODERN SPECIES 24 TRUB1 (ENSCJPG00005020102) ATRNL1 (ENSCJPG00005020103) GFRA1 (ENSCJPG00005020104) CCDC172 (ENSCJPG00005020105) ENSCJPG00005020107 ENSCJPG00005020109 ENSCJPG00005020112 HSPA12A (ENSCJPG00005020113) ENO4 (ENSCJPG00005020114) SHTN1 (ENSCJPG00005020115) VAX1 (ENSCJPG00005020117) KCNK18 (ENSCJPG00005020118) SLC18A2 (ENSCJPG00005020119) PDZD8 (ENSCJPG00005020120) EMX2 (ENSCJPG00005020121) ENSCJPG00005020122 ##22 RAB11FIP2 (ENSCJPG00005020123) FAM204A (ENSCJPG00005020126) ENSCJPG00005020127 CACUL1 (ENSCJPG00005020128) NANOS1 (ENSCJPG00005020131) EIF3A (ENSCJPG00005020132) ENSCJPG00005020135 SFXN4 (ENSCJPG00005020136) PRDX3 (ENSCJPG00005020137) GRK5 (ENSCJPG00005020139) RGS10 (ENSCJPG00005020142) ENSCJPG00005020143 BAG3 (ENSCJPG00005020144) INPP5F (ENSCJPG00005020145) MCMBP (ENSCJPG00005020146) Phasianidae_b ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Turkey MODERN SPECIES 22 ENSMGAG00000012827 ENSMGAG00000012831 OC90 (ENSMGAG00000012820) ENSMGAG00000012806 ENSMGAG00000022313 ENSMGAG00000021266 ENSMGAG00000018841 ENSMGAG00000013067 ENSMGAG00000013064 ENSMGAG00000013058 ENSMGAG00000013070 ENSMGAG00000004974 #21 ENSMGAG00000017665 #25 ATP5F1B (ENSMGAG00000001133) #24 PTGES3 (ENSMGAG00000001129) #23 ENSMGAG00000003551 ##22 ENSMGAG00000004967 ENSMGAG00000004952 ENSMGAG00000001265 Lepidosauria ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Episquamata ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Laterata ANCESTRAL SPECIES ENSGT00440000033468.d ##22 Common wall lizard MODERN SPECIES 10 GPR182 (ENSPMRG00000022586) ZBTB39 (ENSPMRG00000022584) ENSPMRG00000022577 ENSPMRG00000022568 ENSPMRG00000022556 ENSPMRG00000022551 ENSPMRG00000022549 ENSPMRG00000022545 ENSPMRG00000022543 ENSPMRG00000022540 ENSPMRG00000022535 ENSPMRG00000022529 ENSPMRG00000022504 ENSPMRG00000022483 PRIM1 (ENSPMRG00000022380) #21 ENSPMRG00000022361 ##22 PTGES3 (ENSPMRG00000022334) #23 ENSPMRG00000022316 PRPF40B (ENSPMRG00000022297) FMNL3 (ENSPMRG00000021374) TMBIM6 (ENSPMRG00000021105) NCKAP5L (ENSPMRG00000021064) KANSL2 (ENSPMRG00000020997) CCNT1 (ENSPMRG00000020978) ENSPMRG00000020976 ADCY6 (ENSPMRG00000020545) CACNB3 (ENSPMRG00000020335) DDX23 (ENSPMRG00000020281) RND1 (ENSPMRG00000020270) CCDC65 (ENSPMRG00000020261) FKBP11 (ENSPMRG00000020247) Toxicofera ANCESTRAL SPECIES 54 ENSGT00940000161209 ENSGT00940000165528 ENSGT00940000157571 ENSGT00390000018078 ENSGT00390000005780.a ENSGT00940000160485 ENSGT00940000156963.a.b ENSGT00940000163656 ENSGT00940000158975 ENSGT00940000165541 ENSGT00390000003022 ENSGT00940000160369 ENSGT00390000016016.B ENSGT00940000154563 ENSGT01030000234607.A.a.b.a ENSGT00440000033468.d ##22 ENSGT00390000012929 ENSGT00940000153231.A ENSGT00390000006665.b ENSGT00390000017352 ENSGT00730000111044 ENSGT00950000183005.a.a ENSGT00940000153832.f.b Lizard MODERN SPECIES 1075 ENSACAG00000043931 ENSACAG00000000911 ENSACAG00000001165 TMEM215 (ENSACAG00000001211) ENSACAG00000036173 ENSACAG00000045300 ENSACAG00000001263 TOPORS (ENSACAG00000001351) RIGI (ENSACAG00000001354) ENSACAG00000009185 ##22 Elapidae ANCESTRAL SPECIES 176 ENSGT01030000234607.A.a.b.a ENSGT00440000033468.d ##22 Elapidae_a ANCESTRAL SPECIES 237 ENSGT00940000154563 ENSGT01030000234607.A.a.b.a ENSGT00440000033468.d ##22 Acanthophiinae ANCESTRAL SPECIES 137 ENSGT00940000161885 ENSGT00940000162364.b ENSGT00940000159742 ENSGT00940000160737 ENSGT00940000160216 ENSGT00940000163607 ENSGT00940000154276 ENSGT00940000159274 ENSGT00940000154268 ENSGT00390000013284 ENSGT00940000154563 ENSGT01030000234607.A.a.b.a ENSGT00440000033468.d ##22 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 18 FBXO8 (ENSNSUG00000009704) ENSNSUG00000009703 HPGD (ENSNSUG00000009702) GLRA3 (ENSNSUG00000009701) GPM6A (ENSNSUG00000009700) WDR17 (ENSNSUG00000009691) SPATA4 (ENSNSUG00000009685) ASB5 (ENSNSUG00000009682) SPCS3 (ENSNSUG00000009681) ENSNSUG00000009680 VEGFC (ENSNSUG00000009678) ENSNSUG00000009677 AGA (ENSNSUG00000009676) ENSNSUG00000009675 ENSNSUG00000009674 ##22 TENM3 (ENSNSUG00000009672) ENSNSUG00000009671 DCTD (ENSNSUG00000009670) ENSNSUG00000009669 ENSNSUG00000009668 ENSNSUG00000009667 ENSNSUG00000009666 ENSNSUG00000009665 CDKN2AIP (ENSNSUG00000009664) ING2 (ENSNSUG00000009662) RWDD4 (ENSNSUG00000009648) TRAPPC11 (ENSNSUG00000009636) STOX2 (ENSNSUG00000009624) ENPP6 (ENSNSUG00000009622) IRF2 (ENSNSUG00000009621) Mainland tiger snake MODERN SPECIES 207 ENSNSUG00000018156 ENSNSUG00000018157 ENSNSUG00000018158 ENSNSUG00000018181 ENSNSUG00000018182 ENSNSUG00000018183 GPR182 (ENSNSUG00000018195) ZBTB39 (ENSNSUG00000018196) TAC3 (ENSNSUG00000018198) ENSNSUG00000018199 ENSNSUG00000018201 ENSNSUG00000018202 ENSNSUG00000018203 ENSNSUG00000018204 PRIM1 (ENSNSUG00000018205) #21 ENSNSUG00000018207 ##22 PTGES3 (ENSNSUG00000018208) #23 ENSNSUG00000018209 PRPF40B (ENSNSUG00000018211) FMNL3 (ENSNSUG00000018212) TMBIM6 (ENSNSUG00000018213) NCKAP5L (ENSNSUG00000018215) KANSL2 (ENSNSUG00000018216) CCNT1 (ENSNSUG00000018217) ADCY6 (ENSNSUG00000018218) Mainland tiger snake MODERN SPECIES 493 BPNT2 (ENSNSUG00000007723) GALNT4 (ENSNSUG00000007719) HIGD1A (ENSNSUG00000007718) ENSNSUG00000007717 NDUFA4 (ENSNSUG00000007716) TMEM129 (ENSNSUG00000007715) ADIPOR1 (ENSNSUG00000007713) TBRG4 (ENSNSUG00000007712) ENSNSUG00000007710 ##22