Euarchontoglires ANCESTRAL SPECIES 7 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.h #26 ENSGT00940000154931 #27 ENSGT00940000154519.g.b ##26 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Glires ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Lagomorpha ANCESTRAL SPECIES 58 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.h #26 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 Rabbit MODERN SPECIES 448 NRN1 (ENSOCUG00000008677) #7 FARS2 (ENSOCUG00000014165) #8 LYRM4 (ENSOCUG00000023362) #9 CDYL (ENSOCUG00000004407) #10 RPP40 (ENSOCUG00000000354) #11 ENSOCUG00000030173 #12 ENSOCUG00000032771 #13 ENSOCUG00000016155 #14 ENSOCUG00000016148 #15 FAM217A (ENSOCUG00000016142) #16 PRPF4B (ENSOCUG00000000425) #17 FAM50B (ENSOCUG00000003308) #18 PXDC1 (ENSOCUG00000021247) #19 SLC22A23 (ENSOCUG00000010469) #20 ENSOCUG00000010464 #21 TUBB2B (ENSOCUG00000009827) #22 BPHL (ENSOCUG00000009825) #23 RIPK1 (ENSOCUG00000011791) #24 NQO2 (ENSOCUG00000016499) #25 ENSOCUG00000006216 #26 SERPINB9 (ENSOCUG00000005091) #27 ENSOCUG00000005088 #28 WRNIP1 (ENSOCUG00000005081) #29 ENSOCUG00000005076 #30 GMDS (ENSOCUG00000015142) #31 Pika DUPLICATION Pika MODERN SPECIES 1475 TUBB2B (ENSOPRG00000000403) #22 TUBB2A (ENSOPRG00000000400) #22 ENSOPRG00000000393 #23 Pika MODERN SPECIES 1475 TUBB2B (ENSOPRG00000000403) #22 TUBB2A (ENSOPRG00000000400) #22 ENSOPRG00000000393 #23 Rodentia ANCESTRAL SPECIES 6 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Rodentia_A ANCESTRAL SPECIES 26 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.c.a.b #27 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Sciuridae ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.c.a.b #27 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00390000012138.a.b.t.ab ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005004818 MPLKIP (ENSSVLG00005004837) SUGCT (ENSSVLG00005004898) ENSSVLG00005005063 ENSSVLG00005005081 INHBA (ENSSVLG00005005151) GLI3 (ENSSVLG00005005178) C7orf25 (ENSSVLG00005005209) PSMA2 (ENSSVLG00005005237) MRPL32 (ENSSVLG00005005303) ENSSVLG00005005320 HECW1 (ENSSVLG00005005468) STK17A (ENSSVLG00005005990) COA1 (ENSSVLG00005006028) BLVRA (ENSSVLG00005006049) ENSSVLG00005006086 #22 MRPS24 (ENSSVLG00005006180) URGCP (ENSSVLG00005006226) ENSSVLG00005006336 UBE2D4 (ENSSVLG00005006358) DBNL (ENSSVLG00005006493) PGAM2 (ENSSVLG00005006699) POLM (ENSSVLG00005006728) AEBP1 (ENSSVLG00005006770) POLD2 (ENSSVLG00005006846) MYL7 (ENSSVLG00005006900) GCK (ENSSVLG00005006971) ENSSVLG00005007143 CAMK2B (ENSSVLG00005007607) NUDCD3 (ENSSVLG00005008781) NPC1L1 (ENSSVLG00005008888) Eurasian red squirrel MODERN SPECIES 2 BDNF (ENSSVLG00005007577) KIF18A (ENSSVLG00005007495) ENSSVLG00005007473 METTL15 (ENSSVLG00005007460) KCNA4 (ENSSVLG00005007441) FSHB (ENSSVLG00005007418) ARL14EP (ENSSVLG00005007404) MPPED2 (ENSSVLG00005007385) ENSSVLG00005007367 DCDC1 (ENSSVLG00005007148) DNAJC24 (ENSSVLG00005007079) IMMP1L (ENSSVLG00005007051) ELP4 (ENSSVLG00005007005) PAX6 (ENSSVLG00005006723) ENSSVLG00005006643 ENSSVLG00005006612 #22 RCN1 (ENSSVLG00005006575) ENSSVLG00005006549 WT1 (ENSSVLG00005006232) EIF3M (ENSSVLG00005006089) CCDC73 (ENSSVLG00005005944) PRRG4 (ENSSVLG00005005895) QSER1 (ENSSVLG00005005823) DEPDC7 (ENSSVLG00005005722) TCP11L1 (ENSSVLG00005005675) CSTF3 (ENSSVLG00005005518) ENSSVLG00005005475 HIPK3 (ENSSVLG00005005422) KIAA1549L (ENSSVLG00005005254) C11orf91 (ENSSVLG00005005211) ENSSVLG00005005193 Eurasian red squirrel MODERN SPECIES 16 NRN1 (ENSSVLG00005008393) #7 FARS2 (ENSSVLG00005008373) #8 ENSSVLG00005008346 LYRM4 (ENSSVLG00005008312) #9 PPP1R3G (ENSSVLG00005008297) RPP40 (ENSSVLG00005008216) #11 CDYL (ENSSVLG00005008158) #10 ECI2 (ENSSVLG00005008033) #14 ENSSVLG00005007999 #15 ENSSVLG00005007911 #16 PRPF4B (ENSSVLG00005007879) #17 FAM50B (ENSSVLG00005007859) #18 PXDC1 (ENSSVLG00005007821) #19 SLC22A23 (ENSSVLG00005007747) #20 PSMG4 (ENSSVLG00005007683) #21 TUBB2B (ENSSVLG00005007652) #22 TUBB2A (ENSSVLG00005007615) #22 ENSSVLG00005007569 #23 RIPK1 (ENSSVLG00005007529) #24 NQO2 (ENSSVLG00005007475) #25 SERPINB6 (ENSSVLG00005007395) ##26 ENSSVLG00005007366 ENSSVLG00005006719 #27 ENSSVLG00005006449 #27 SERPINB1 (ENSSVLG00005006417) #28 WRNIP1 (ENSSVLG00005006348) #29 ENSSVLG00005006323 MYLK4 (ENSSVLG00005006200) #30 ENSSVLG00005006132 GMDS (ENSSVLG00005014861) #31 FOXC1 (ENSSVLG00005014837) Eurasian red squirrel MODERN SPECIES 16 FARS2 (ENSSVLG00005008373) #8 ENSSVLG00005008346 LYRM4 (ENSSVLG00005008312) #9 PPP1R3G (ENSSVLG00005008297) RPP40 (ENSSVLG00005008216) #11 CDYL (ENSSVLG00005008158) #10 ECI2 (ENSSVLG00005008033) #14 ENSSVLG00005007999 #15 ENSSVLG00005007911 #16 PRPF4B (ENSSVLG00005007879) #17 FAM50B (ENSSVLG00005007859) #18 PXDC1 (ENSSVLG00005007821) #19 SLC22A23 (ENSSVLG00005007747) #20 PSMG4 (ENSSVLG00005007683) #21 TUBB2B (ENSSVLG00005007652) #22 TUBB2A (ENSSVLG00005007615) #22 ENSSVLG00005007569 #23 RIPK1 (ENSSVLG00005007529) #24 NQO2 (ENSSVLG00005007475) #25 SERPINB6 (ENSSVLG00005007395) ##26 ENSSVLG00005007366 ENSSVLG00005006719 #27 ENSSVLG00005006449 #27 SERPINB1 (ENSSVLG00005006417) #28 WRNIP1 (ENSSVLG00005006348) #29 ENSSVLG00005006323 MYLK4 (ENSSVLG00005006200) #30 ENSSVLG00005006132 GMDS (ENSSVLG00005014861) #31 FOXC1 (ENSSVLG00005014837) FOXF2 (ENSSVLG00005014790) Eurasian red squirrel MODERN SPECIES 11 OR4Q3 (ENSSVLG00005002974) ENSSVLG00005002963 ENSSVLG00005002955 ENSSVLG00005002945 ENSSVLG00005002922 ENSSVLG00005002909 ENSSVLG00005002897 ENSSVLG00005002883 OR11G2 (ENSSVLG00005002875) ENSSVLG00005002866 OR11H6 (ENSSVLG00005002859) OR11H4 (ENSSVLG00005002848) TTC5 (ENSSVLG00005002830) CCNB1IP1 (ENSSVLG00005002813) PARP2 (ENSSVLG00005002754) ENSSVLG00005002730 #22 TEP1 (ENSSVLG00005002176) KLHL33 (ENSSVLG00005001900) OSGEP (ENSSVLG00005001856) APEX1 (ENSSVLG00005001829) PIP4P1 (ENSSVLG00005001794) PNP (ENSSVLG00005001773) RNASE10 (ENSSVLG00005001759) ENSSVLG00005001749 ENSSVLG00005001741 RNASE11 (ENSSVLG00005001735) RNASE12 (ENSSVLG00005001727) OR6S1 (ENSSVLG00005001715) ANG (ENSSVLG00005001703) RNASE4 (ENSSVLG00005001692) ENSSVLG00005001670 Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 37 ENSGT00390000000878.h.a ENSGT00390000014833 ENSGT00940000164650 ENSGT00390000011295.b ENSGT00940000155602 ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167.n ENSGT00940000153470.a.a.a.b.m.a ENSGT00940000154150.gd.a #22 ENSGT00770000120611.B ENSGT00390000007287 ENSGT00940000156475 ENSGT00940000158500 ENSGT00940000155880 ENSGT00940000155957 ENSGT00390000009405.a.a.a.b.a.b.a.b ENSGT00390000015236 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000154431.e.b ENSGT00940000153305.c.e.b ENSGT00940000156007 ENSGT00390000017856.a ENSGT00940000157315 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00390000014833 ENSGT00390000011295.b ENSGT00940000155602 ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167.n ENSGT01030000235027 ENSGT00940000154530.w ENSGT00940000153470.a.a.a.b.m.a ENSGT00940000154150.gd.a #22 ENSGT00770000120611.B ENSGT00390000007287 ENSGT00940000156475 ENSGT00940000158500 ENSGT00940000155880 ENSGT00940000155957 ENSGT00390000009405.a.a.a.b.a.b.a.b ENSGT00390000015236 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000154431.e.b ENSGT00940000153305.c.e.b ENSGT00940000156007 ENSGT00390000017856.a ENSGT00940000157315 Squirrel DUPLICATION Squirrel MODERN SPECIES 78 TOMM7 (ENSSTOG00000008694) HYCC1 (ENSSTOG00000027983) KLHL7 (ENSSTOG00000008470) NUP42 (ENSSTOG00000008486) GPNMB (ENSSTOG00000008499) MALSU1 (ENSSTOG00000027376) IGF2BP3 (ENSSTOG00000008519) TRA2A (ENSSTOG00000012073) ENSSTOG00000030692 ENSSTOG00000032668 CCDC126 (ENSSTOG00000021255) ENSSTOG00000029732 ENSSTOG00000020371 #22 ENSSTOG00000014113 ENSSTOG00000027960 #22 STK31 (ENSSTOG00000003577) ENSSTOG00000033576 ENSSTOG00000021917 NPY (ENSSTOG00000020410) PALS2 (ENSSTOG00000001908) ENSSTOG00000014905 OSBPL3 (ENSSTOG00000001755) C7orf31 (ENSSTOG00000008859) NPVF (ENSSTOG00000008873) NFE2L3 (ENSSTOG00000014758) ENSSTOG00000006202 CBX3 (ENSSTOG00000006223) SNX10 (ENSSTOG00000024131) Squirrel MODERN SPECIES 78 HOXA1 (ENSSTOG00000024209) SKAP2 (ENSSTOG00000021247) SNX10 (ENSSTOG00000024131) CBX3 (ENSSTOG00000006223) ENSSTOG00000006202 NFE2L3 (ENSSTOG00000014758) NPVF (ENSSTOG00000008873) C7orf31 (ENSSTOG00000008859) OSBPL3 (ENSSTOG00000001755) ENSSTOG00000014905 PALS2 (ENSSTOG00000001908) NPY (ENSSTOG00000020410) ENSSTOG00000021917 ENSSTOG00000033576 STK31 (ENSSTOG00000003577) ENSSTOG00000027960 #22 ENSSTOG00000014113 ENSSTOG00000020371 #22 ENSSTOG00000029732 CCDC126 (ENSSTOG00000021255) ENSSTOG00000032668 ENSSTOG00000030692 TRA2A (ENSSTOG00000012073) IGF2BP3 (ENSSTOG00000008519) MALSU1 (ENSSTOG00000027376) GPNMB (ENSSTOG00000008499) NUP42 (ENSSTOG00000008486) KLHL7 (ENSSTOG00000008470) HYCC1 (ENSSTOG00000027983) TOMM7 (ENSSTOG00000008694) Alpin marmot MODERN SPECIES 26 ENSMMMG00000005021 ENSMMMG00000005025 TOMM7 (ENSMMMG00000005059) ENSMMMG00000005078 HYCC1 (ENSMMMG00000005151) ENSMMMG00000005220 KLHL7 (ENSMMMG00000005243) NUP42 (ENSMMMG00000005252) GPNMB (ENSMMMG00000005258) MALSU1 (ENSMMMG00000005281) IGF2BP3 (ENSMMMG00000005303) TRA2A (ENSMMMG00000005330) ENSMMMG00000005357 ENSMMMG00000005362 #22 ENSMMMG00000005429 STK31 (ENSMMMG00000005447) ENSMMMG00000005635 NPY (ENSMMMG00000005649) PALS2 (ENSMMMG00000005665) GSDME (ENSMMMG00000005813) OSBPL3 (ENSMMMG00000005837) ENSMMMG00000006125 C7orf31 (ENSMMMG00000006134) NPVF (ENSMMMG00000006151) ENSMMMG00000006190 ENSMMMG00000006197 ENSMMMG00000006360 SNX10 (ENSMMMG00000006398) ENSMMMG00000006429 Marmotini ANCESTRAL SPECIES 37 ENSGT00390000015821 ENSGT00530000063186.b.a ENSGT00940000155450 ENSGT00390000001319 ENSGT00940000160556 ENSGT00530000063608.A ENSGT00940000155909 ENSGT00940000156004 ENSGT00940000161552 ENSGT00940000156782.c ENSGT00940000162844 ENSGT00520000055647.a ENSGT00720000108792.A ENSGT00940000161703 ENSGT00940000154150.gd.b #22 ENSGT00940000157781 ENSGT00390000014376 ENSGT00940000161393 ENSGT00390000000706 ENSGT00940000162104 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00940000161703 ENSGT00940000154150.gd.b #22 ENSGT00940000157781 ENSGT00390000014376 ENSGT00940000161393 ENSGT00390000000706 ENSGT00940000162104 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Arctic ground squirrel MODERN SPECIES 499 ABCA13 (ENSUPAG00010000302) ENSUPAG00010000185 #22 UPP1 (ENSUPAG00010000153) SUN3 (ENSUPAG00010000131) C7orf57 (ENSUPAG00010000060) HUS1 (ENSUPAG00010000045) PKD1L1 (ENSUPAG00010022631) Squirrel MODERN SPECIES 78 ENSSTOG00000032455 ENSSTOG00000026135 #22 UPP1 (ENSSTOG00000005502) C7orf57 (ENSSTOG00000005482) SUN3 (ENSSTOG00000005471) HUS1 (ENSSTOG00000027204) ENSSTOG00000005345 TNS3 (ENSSTOG00000015793) IGFBP3 (ENSSTOG00000008762) IGFBP1 (ENSSTOG00000008746) ADCY1 (ENSSTOG00000008713) ENSSTOG00000015205 RAMP3 (ENSSTOG00000025331) ENSSTOG00000020680 TBRG4 (ENSSTOG00000008370) NACAD (ENSSTOG00000022804) CCM2 (ENSSTOG00000026702) Alpin marmot MODERN SPECIES 26 ENSMMMG00000015809 ENSMMMG00000015788 ENSMMMG00000015785 ENSMMMG00000015775 ENSMMMG00000015722 GRB10 (ENSMMMG00000015688) DDC (ENSMMMG00000015645) FIGNL1 (ENSMMMG00000015635) IKZF1 (ENSMMMG00000015562) SPATA48 (ENSMMMG00000015542) ZPBP (ENSMMMG00000015506) VWC2 (ENSMMMG00000015492) ENSMMMG00000015482 ENSMMMG00000015465 ABCA13 (ENSMMMG00000015281) ENSMMMG00000015221 #22 UPP1 (ENSMMMG00000015208) C7orf57 (ENSMMMG00000015182) SUN3 (ENSMMMG00000015174) HUS1 (ENSMMMG00000015160) PKD1L1 (ENSMMMG00000015029) TNS3 (ENSMMMG00000014995) ENSMMMG00000014987 ENSMMMG00000014980 ENSMMMG00000014975 IGFBP3 (ENSMMMG00000014868) IGFBP1 (ENSMMMG00000014859) ADCY1 (ENSMMMG00000014821) RAMP3 (ENSMMMG00000014813) ENSMMMG00000014809 ENSMMMG00000014801 Marmotini ANCESTRAL SPECIES 40 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.hd #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 Alpin marmot MODERN SPECIES 36 F13A1 (ENSMMMG00000014594) NRN1 (ENSMMMG00000014586) #7 FARS2 (ENSMMMG00000014567) #8 LYRM4 (ENSMMMG00000014551) #9 PPP1R3G (ENSMMMG00000014548) RPP40 (ENSMMMG00000014521) #11 CDYL (ENSMMMG00000014357) #10 ECI2 (ENSMMMG00000014301) #14 ENSMMMG00000014296 #15 FAM217A (ENSMMMG00000014281) #16 PRPF4B (ENSMMMG00000014263) #17 FAM50B (ENSMMMG00000014258) #18 ENSMMMG00000014254 #19 ENSMMMG00000014241 SLC22A23 (ENSMMMG00000014224) #20 TUBB2B (ENSMMMG00000014205) #22 BPHL (ENSMMMG00000014194) #23 RIPK1 (ENSMMMG00000014179) #24 Marmotini_b ANCESTRAL SPECIES 68 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00390000015826.x ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.hd #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 350 PPP1R3G (ENSUPAG00010010716) RPP40 (ENSUPAG00010010701) #11 ENSUPAG00010010692 CDYL (ENSUPAG00010010685) #10 ECI2 (ENSUPAG00010010667) #14 ENSUPAG00010010661 #15 FAM217A (ENSUPAG00010010641) #16 PRPF4B (ENSUPAG00010010629) #17 FAM50B (ENSUPAG00010010626) #18 PXDC1 (ENSUPAG00010010623) #19 ENSUPAG00010010614 SLC22A23 (ENSUPAG00010010597) #20 PSMG4 (ENSUPAG00010010591) #21 ENSUPAG00010010587 TUBB2B (ENSUPAG00010010579) #22 ENSUPAG00010010577 #22 BPHL (ENSUPAG00010010568) #23 RIPK1 (ENSUPAG00010010546) #24 Arctic ground squirrel MODERN SPECIES 350 PPP1R3G (ENSUPAG00010010716) RPP40 (ENSUPAG00010010701) #11 ENSUPAG00010010692 CDYL (ENSUPAG00010010685) #10 ECI2 (ENSUPAG00010010667) #14 ENSUPAG00010010661 #15 FAM217A (ENSUPAG00010010641) #16 PRPF4B (ENSUPAG00010010629) #17 FAM50B (ENSUPAG00010010626) #18 PXDC1 (ENSUPAG00010010623) #19 ENSUPAG00010010614 SLC22A23 (ENSUPAG00010010597) #20 PSMG4 (ENSUPAG00010010591) #21 ENSUPAG00010010587 TUBB2B (ENSUPAG00010010579) #22 ENSUPAG00010010577 #22 BPHL (ENSUPAG00010010568) #23 RIPK1 (ENSUPAG00010010546) #24 Squirrel DUPLICATION Squirrel MODERN SPECIES 134 ENSSTOG00000024647 #7 FARS2 (ENSSTOG00000012156) #8 LYRM4 (ENSSTOG00000026736) #9 PPP1R3G (ENSSTOG00000021636) RPP40 (ENSSTOG00000011199) #11 CDYL (ENSSTOG00000011187) #10 ECI2 (ENSSTOG00000004305) #14 ENSSTOG00000030065 #15 FAM217A (ENSSTOG00000030768) #16 PRPF4B (ENSSTOG00000004256) #17 FAM50B (ENSSTOG00000026905) #18 PXDC1 (ENSSTOG00000027169) #19 ENSSTOG00000030156 SLC22A23 (ENSSTOG00000031179) #20 PSMG4 (ENSSTOG00000020187) #21 TUBB2B (ENSSTOG00000022186) #22 TUBB2A (ENSSTOG00000024688) #22 BPHL (ENSSTOG00000001554) #23 RIPK1 (ENSSTOG00000001542) #24 Squirrel MODERN SPECIES 134 FARS2 (ENSSTOG00000012156) #8 LYRM4 (ENSSTOG00000026736) #9 PPP1R3G (ENSSTOG00000021636) RPP40 (ENSSTOG00000011199) #11 CDYL (ENSSTOG00000011187) #10 ECI2 (ENSSTOG00000004305) #14 ENSSTOG00000030065 #15 FAM217A (ENSSTOG00000030768) #16 PRPF4B (ENSSTOG00000004256) #17 FAM50B (ENSSTOG00000026905) #18 PXDC1 (ENSSTOG00000027169) #19 ENSSTOG00000030156 SLC22A23 (ENSSTOG00000031179) #20 PSMG4 (ENSSTOG00000020187) #21 TUBB2B (ENSSTOG00000022186) #22 TUBB2A (ENSSTOG00000024688) #22 BPHL (ENSSTOG00000001554) #23 RIPK1 (ENSSTOG00000001542) #24 Hystricomorpha ANCESTRAL SPECIES 42 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000036093 ENSHGLG00000020343 ENSHGLG00000004389 #8 ENSHGLG00000038262 PPP1R3G (ENSHGLG00000041006) ENSHGLG00000040678 #9 RPP40 (ENSHGLG00000004871) #11 ENSHGLG00000005262 #10 ENSHGLG00000038867 ECI2 (ENSHGLG00000005614) #14 PRPF4B (ENSHGLG00000005945) #17 FAM50B (ENSHGLG00000006289) #18 PXDC1 (ENSHGLG00000006650) #19 SLC22A23 (ENSHGLG00000007033) #20 ENSHGLG00000007366 TUBB2B (ENSHGLG00000007696) #22 ENSHGLG00000043950 #22 BPHL (ENSHGLG00000008018) #23 RIPK1 (ENSHGLG00000008330) #24 ENSHGLG00000045779 #25 SERPINB6 (ENSHGLG00000015274) ##26 ENSHGLG00000017487 #27 SERPINB1 (ENSHGLG00000032738) #28 WRNIP1 (ENSHGLG00000014216) #29 ENSHGLG00000040911 ENSHGLG00000014288 #30 ENSHGLG00000033368 GMDS (ENSHGLG00000014454) #31 FOXC1 (ENSHGLG00000040750) FOXF2 (ENSHGLG00000007914) FOXQ1 (ENSHGLG00000007951) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000020343 ENSHGLG00000004389 #8 ENSHGLG00000038262 PPP1R3G (ENSHGLG00000041006) ENSHGLG00000040678 #9 RPP40 (ENSHGLG00000004871) #11 ENSHGLG00000005262 #10 ENSHGLG00000038867 ECI2 (ENSHGLG00000005614) #14 PRPF4B (ENSHGLG00000005945) #17 FAM50B (ENSHGLG00000006289) #18 PXDC1 (ENSHGLG00000006650) #19 SLC22A23 (ENSHGLG00000007033) #20 ENSHGLG00000007366 TUBB2B (ENSHGLG00000007696) #22 ENSHGLG00000043950 #22 BPHL (ENSHGLG00000008018) #23 RIPK1 (ENSHGLG00000008330) #24 ENSHGLG00000045779 #25 SERPINB6 (ENSHGLG00000015274) ##26 ENSHGLG00000017487 #27 SERPINB1 (ENSHGLG00000032738) #28 WRNIP1 (ENSHGLG00000014216) #29 ENSHGLG00000040911 ENSHGLG00000014288 #30 ENSHGLG00000033368 GMDS (ENSHGLG00000014454) #31 FOXC1 (ENSHGLG00000040750) FOXF2 (ENSHGLG00000007914) FOXQ1 (ENSHGLG00000007951) ENSHGLG00000044630 Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 ENSGT01100000263474.a.b.b.f Guinea pig MODERN SPECIES 38 SSR1 (ENSCPOG00000039953) RREB1 (ENSCPOG00000014380) LY86 (ENSCPOG00000012001) F13A1 (ENSCPOG00000005276) NRN1 (ENSCPOG00000021547) #7 FARS2 (ENSCPOG00000003994) #8 LYRM4 (ENSCPOG00000038899) #9 RPP40 (ENSCPOG00000005855) #11 CDYL (ENSCPOG00000005847) #10 ECI2 (ENSCPOG00000004788) #14 PRPF4B (ENSCPOG00000004775) #17 FAM50B (ENSCPOG00000000148) #18 PXDC1 (ENSCPOG00000038768) #19 SLC22A23 (ENSCPOG00000010470) #20 PSMG4 (ENSCPOG00000026747) #21 TUBB2B (ENSCPOG00000039814) #22 BPHL (ENSCPOG00000036729) #23 RIPK1 (ENSCPOG00000005195) #24 NQO2 (ENSCPOG00000033205) #25 SERPINB6 (ENSCPOG00000008254) ##26 ENSCPOG00000024499 #27 ENSCPOG00000040114 #27 ENSCPOG00000037377 #27 ENSCPOG00000021276 #27 ENSCPOG00000030607 #27 Hystricomorpha_b ANCESTRAL SPECIES 58 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000170978 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Degu DUPLICATION Degu MODERN SPECIES 61 ENSODEG00000010547 PLEKHH2 (ENSODEG00000012982) DYNC2LI1 (ENSODEG00000011054) ABCG5 (ENSODEG00000010535) ABCG8 (ENSODEG00000012555) LRPPRC (ENSODEG00000011211) ENSODEG00000019947 ENSODEG00000020039 ENSODEG00000011737 PPM1B (ENSODEG00000012106) SLC3A1 (ENSODEG00000011768) PREPL (ENSODEG00000012834) ENSODEG00000019894 ENSODEG00000019899 CAMKMT (ENSODEG00000013111) ENSODEG00000019927 #22 ENSODEG00000019924 SIX3 (ENSODEG00000011611) SIX2 (ENSODEG00000011970) ENSODEG00000012336 SRBD1 (ENSODEG00000012095) PRKCE (ENSODEG00000011779) EPAS1 (ENSODEG00000011675) RHOQ (ENSODEG00000012565) ENSODEG00000013963 ENSODEG00000011714 SOCS5 (ENSODEG00000019978) ENSODEG00000011724 TTC7A (ENSODEG00000011584) STPG4 (ENSODEG00000012221) CALM2 (ENSODEG00000013273) Degu MODERN SPECIES 64 NRN1 (ENSODEG00000006426) #7 FARS2 (ENSODEG00000006881) #8 ENSODEG00000019555 LYRM4 (ENSODEG00000005678) #9 ENSODEG00000006170 #11 CDYL (ENSODEG00000006073) #10 ENSODEG00000019345 ECI2 (ENSODEG00000007068) #14 FAM217A (ENSODEG00000006489) #16 PRPF4B (ENSODEG00000006156) #17 PXDC1 (ENSODEG00000006864) #19 SLC22A23 (ENSODEG00000007173) #20 PSMG4 (ENSODEG00000006109) #21 ENSODEG00000006987 #22 ENSODEG00000006037 TUBB2A (ENSODEG00000006689) #22 BPHL (ENSODEG00000008397) #23 RIPK1 (ENSODEG00000007668) #24 NQO2 (ENSODEG00000006400) #25 SERPINB6 (ENSODEG00000008291) ##26 ENSODEG00000006244 #27 ENSODEG00000006648 ENSODEG00000006906 #27 SERPINB1 (ENSODEG00000010241) #28 WRNIP1 (ENSODEG00000006805) #29 MYLK4 (ENSODEG00000006897) #30 GMDS (ENSODEG00000009960) #31 ENSODEG00000007557 FOXC1 (ENSODEG00000006912) FOXF2 (ENSODEG00000007607) EXOC2 (ENSODEG00000006797) Degu DUPLICATION Degu MODERN SPECIES 64 LY86 (ENSODEG00000005843) F13A1 (ENSODEG00000006301) NRN1 (ENSODEG00000006426) #7 FARS2 (ENSODEG00000006881) #8 ENSODEG00000019555 LYRM4 (ENSODEG00000005678) #9 ENSODEG00000006170 #11 CDYL (ENSODEG00000006073) #10 ENSODEG00000019345 ECI2 (ENSODEG00000007068) #14 FAM217A (ENSODEG00000006489) #16 PRPF4B (ENSODEG00000006156) #17 PXDC1 (ENSODEG00000006864) #19 SLC22A23 (ENSODEG00000007173) #20 PSMG4 (ENSODEG00000006109) #21 ENSODEG00000006987 #22 ENSODEG00000006037 TUBB2A (ENSODEG00000006689) #22 BPHL (ENSODEG00000008397) #23 RIPK1 (ENSODEG00000007668) #24 NQO2 (ENSODEG00000006400) #25 SERPINB6 (ENSODEG00000008291) ##26 ENSODEG00000006244 #27 ENSODEG00000006648 ENSODEG00000006906 #27 SERPINB1 (ENSODEG00000010241) #28 WRNIP1 (ENSODEG00000006805) #29 MYLK4 (ENSODEG00000006897) #30 GMDS (ENSODEG00000009960) #31 ENSODEG00000007557 FOXC1 (ENSODEG00000006912) Degu MODERN SPECIES 62 HSCB (ENSODEG00000017352) XBP1 (ENSODEG00000017362) ZNRF3 (ENSODEG00000017168) KREMEN1 (ENSODEG00000017265) ENSODEG00000020526 EMID1 (ENSODEG00000017465) ENSODEG00000017244 RHBDD3 (ENSODEG00000017373) ENSODEG00000017496 GAS2L1 (ENSODEG00000017194) RASL10A (ENSODEG00000017393) AP1B1 (ENSODEG00000017338) NEFH (ENSODEG00000017433) ENSODEG00000017650 NIPSNAP1 (ENSODEG00000017189) ENSODEG00000017494 #22 NF2 (ENSODEG00000017517) CABP7 (ENSODEG00000017415) ZMAT5 (ENSODEG00000017389) ENSODEG00000017651 ASCC2 (ENSODEG00000017546) ENSODEG00000017520 ENSODEG00000017459 KIF21A (ENSODEG00000017431) ENSODEG00000017452 CPNE8 (ENSODEG00000017711) ENSODEG00000020455 ENSODEG00000017594 SYT10 (ENSODEG00000017446) Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 172 LY86 (ENSCLAG00000002671) F13A1 (ENSCLAG00000003000) NRN1 (ENSCLAG00000011260) #7 FARS2 (ENSCLAG00000017316) #8 ENSCLAG00000011017 PPP1R3G (ENSCLAG00000012673) RPP40 (ENSCLAG00000003235) #11 CDYL (ENSCLAG00000003356) #10 ECI2 (ENSCLAG00000003560) #14 ENSCLAG00000003863 #15 FAM217A (ENSCLAG00000004051) #16 PRPF4B (ENSCLAG00000004201) #17 PXDC1 (ENSCLAG00000002715) #19 SLC22A23 (ENSCLAG00000002845) #20 PSMG4 (ENSCLAG00000003148) #21 TUBB2B (ENSCLAG00000003177) #22 BPHL (ENSCLAG00000003241) #23 ENSCLAG00000003326 #22 RIPK1 (ENSCLAG00000002300) #24 NQO2 (ENSCLAG00000002417) #25 SERPINB6 (ENSCLAG00000002474) ##26 ENSCLAG00000002657 #27 ENSCLAG00000002501 #27 ENSCLAG00000007069 #27 ENSCLAG00000007653 #27 SERPINB1 (ENSCLAG00000008637) #28 WRNIP1 (ENSCLAG00000006960) #29 MYLK4 (ENSCLAG00000007226) #30 GMDS (ENSCLAG00000002602) #31 FOXF2 (ENSCLAG00000002746) EXOC2 (ENSCLAG00000003072) Long-tailed chinchilla MODERN SPECIES 172 NRN1 (ENSCLAG00000011260) #7 FARS2 (ENSCLAG00000017316) #8 ENSCLAG00000011017 PPP1R3G (ENSCLAG00000012673) RPP40 (ENSCLAG00000003235) #11 CDYL (ENSCLAG00000003356) #10 ECI2 (ENSCLAG00000003560) #14 ENSCLAG00000003863 #15 FAM217A (ENSCLAG00000004051) #16 PRPF4B (ENSCLAG00000004201) #17 PXDC1 (ENSCLAG00000002715) #19 SLC22A23 (ENSCLAG00000002845) #20 PSMG4 (ENSCLAG00000003148) #21 TUBB2B (ENSCLAG00000003177) #22 BPHL (ENSCLAG00000003241) #23 ENSCLAG00000003326 #22 RIPK1 (ENSCLAG00000002300) #24 NQO2 (ENSCLAG00000002417) #25 SERPINB6 (ENSCLAG00000002474) ##26 ENSCLAG00000002657 #27 ENSCLAG00000002501 #27 ENSCLAG00000007069 #27 ENSCLAG00000007653 #27 SERPINB1 (ENSCLAG00000008637) #28 WRNIP1 (ENSCLAG00000006960) #29 MYLK4 (ENSCLAG00000007226) #30 GMDS (ENSCLAG00000002602) #31 FOXF2 (ENSCLAG00000002746) EXOC2 (ENSCLAG00000003072) IRF4 (ENSCLAG00000004136) DUSP22 (ENSCLAG00000004363) Rodentia_B ANCESTRAL SPECIES 8 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Myomorpha ANCESTRAL SPECIES 11 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Lesser Egyptian jerboa MODERN SPECIES 129 Ly86 (ENSJJAG00000022504) F13a1 (ENSJJAG00000000070) Nrn1 (ENSJJAG00000000725) #7 Fars2 (ENSJJAG00000002799) #8 Lyrm4 (ENSJJAG00000004657) #9 Rpp40 (ENSJJAG00000020629) #11 Cdyl (ENSJJAG00000000586) #10 ENSJJAG00000001626 ENSJJAG00000004231 #14 Tex56 (ENSJJAG00000008898) #15 ENSJJAG00000010338 #16 Prpf4b (ENSJJAG00000011217) #17 Pxdc1 (ENSJJAG00000012785) #19 Slc22a23 (ENSJJAG00000005711) #20 Psmg4 (ENSJJAG00000011408) #21 Tubb2b (ENSJJAG00000011739) #22 Bphl (ENSJJAG00000012949) #23 Ripk1 (ENSJJAG00000013771) #24 Nqo2 (ENSJJAG00000015012) #25 ENSJJAG00000015735 ##26 ENSJJAG00000017382 #27 ENSJJAG00000010900 #28 Wrnip1 (ENSJJAG00000011299) #29 ENSJJAG00000013456 #30 Gmds (ENSJJAG00000015490) #31 ENSJJAG00000015833 Foxf2 (ENSJJAG00000017530) ENSJJAG00000017878 Irf4 (ENSJJAG00000019182) Dusp22 (ENSJJAG00000019867) Muroidea ANCESTRAL SPECIES 15 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT01000000215059 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 764 Rreb1 (ENSNGAG00000021506) Ly86 (ENSNGAG00000011116) F13a1 (ENSNGAG00000022897) Nrn1 (ENSNGAG00000018954) #7 Fars2 (ENSNGAG00000021589) #8 Lyrm4 (ENSNGAG00000024207) #9 ENSNGAG00000023955 #11 Cdyl (ENSNGAG00000023764) #10 ENSNGAG00000020575 #14 Prpf4b (ENSNGAG00000023322) #17 ENSNGAG00000009942 Fam50b (ENSNGAG00000024017) #18 Pxdc1 (ENSNGAG00000004640) #19 Slc22a23 (ENSNGAG00000021185) #20 Psmg4 (ENSNGAG00000016957) #21 Tubb2b (ENSNGAG00000021437) #22 Tubb2a (ENSNGAG00000020746) #22 Bphl (ENSNGAG00000024371) #23 Ripk1 (ENSNGAG00000010576) #24 Upper Galilee mountains blind mole rat MODERN SPECIES 764 Ly86 (ENSNGAG00000011116) F13a1 (ENSNGAG00000022897) Nrn1 (ENSNGAG00000018954) #7 Fars2 (ENSNGAG00000021589) #8 Lyrm4 (ENSNGAG00000024207) #9 ENSNGAG00000023955 #11 Cdyl (ENSNGAG00000023764) #10 ENSNGAG00000020575 #14 Prpf4b (ENSNGAG00000023322) #17 ENSNGAG00000009942 Fam50b (ENSNGAG00000024017) #18 Pxdc1 (ENSNGAG00000004640) #19 Slc22a23 (ENSNGAG00000021185) #20 Psmg4 (ENSNGAG00000016957) #21 Tubb2b (ENSNGAG00000021437) #22 Tubb2a (ENSNGAG00000020746) #22 Bphl (ENSNGAG00000024371) #23 Ripk1 (ENSNGAG00000010576) #24 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q #14 ENSGT00940000155105.r #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.b ##26 ENSGT00940000154519.g.b.a ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT01000000215059 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Murinae ANCESTRAL SPECIES 21 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q #14 ENSGT00940000155105.r #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.b ##26 ENSGT00940000154573.k.b #28 ENSGT00940000154931.d.o.a.b #27 ENSGT00940000154931.d.o.a.a #27 ENSGT00940000154519.g.b.a.b ##26 ENSGT00940000154573.l #28 ENSGT00940000154573.k.a #28 ENSGT01000000215059 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b Rat DUPLICATION Rat MODERN SPECIES 8 Fars2 (ENSRNOG00000016135) #8 Lyrm4 (ENSRNOG00000047970) #9 Ppp1r3g (ENSRNOG00000016222) Rpp40 (ENSRNOG00000016226) #11 Cdyl (ENSRNOG00000032215) #10 Eci2 (ENSRNOG00000066714) #14 Eci3 (ENSRNOG00000029549) #14 Tex56p (ENSRNOG00000033763) #15 Fam217a (ENSRNOG00000016672) #16 Prpf4b (ENSRNOG00000016705) #17 Fam50b (ENSRNOG00000017083) #18 Pxdc1 (ENSRNOG00000017093) #19 Slc22a23 (ENSRNOG00000017210) #20 Psmg4 (ENSRNOG00000039265) #21 Tubb2a (ENSRNOG00000017558) #22 Tubb2b (ENSRNOG00000017445) #22 Bphl (ENSRNOG00000017577) #23 Ripk1 (ENSRNOG00000017787) #24 Serpinb6a (ENSRNOG00000017962) ##26 Nqo2 (ENSRNOG00000017820) #25 RGD1564786 (ENSRNOG00000063990) ##26 Serpinb6e (ENSRNOG00000070025) ##26 Serpinb9d (ENSRNOG00000022139) #27 Serpinb1b (ENSRNOG00000034229) #28 RGD1562844 (ENSRNOG00000048576) #27 Serpinb9 (ENSRNOG00000033772) #27 Serpinb6b (ENSRNOG00000016420) ##26 Serpinb1a (ENSRNOG00000016581) #28 Wrnip1 (ENSRNOG00000017040) #29 ENSRNOG00000063699 Mylk4 (ENSRNOG00000070083) #30 Rat MODERN SPECIES 8 Nrn1 (ENSRNOG00000050767) #7 Fars2 (ENSRNOG00000016135) #8 Lyrm4 (ENSRNOG00000047970) #9 Ppp1r3g (ENSRNOG00000016222) Rpp40 (ENSRNOG00000016226) #11 Cdyl (ENSRNOG00000032215) #10 Eci2 (ENSRNOG00000066714) #14 Eci3 (ENSRNOG00000029549) #14 Tex56p (ENSRNOG00000033763) #15 Fam217a (ENSRNOG00000016672) #16 Prpf4b (ENSRNOG00000016705) #17 Fam50b (ENSRNOG00000017083) #18 Pxdc1 (ENSRNOG00000017093) #19 Slc22a23 (ENSRNOG00000017210) #20 Psmg4 (ENSRNOG00000039265) #21 Tubb2a (ENSRNOG00000017558) #22 Tubb2b (ENSRNOG00000017445) #22 Bphl (ENSRNOG00000017577) #23 Ripk1 (ENSRNOG00000017787) #24 Serpinb6a (ENSRNOG00000017962) ##26 Nqo2 (ENSRNOG00000017820) #25 RGD1564786 (ENSRNOG00000063990) ##26 Serpinb6e (ENSRNOG00000070025) ##26 Serpinb9d (ENSRNOG00000022139) #27 Serpinb1b (ENSRNOG00000034229) #28 RGD1562844 (ENSRNOG00000048576) #27 Serpinb9 (ENSRNOG00000033772) #27 Serpinb6b (ENSRNOG00000016420) ##26 Serpinb1a (ENSRNOG00000016581) #28 Wrnip1 (ENSRNOG00000017040) #29 ENSRNOG00000063699 Mus ANCESTRAL SPECIES 18 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q.a #14 ENSGT00940000155105.q.b #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.b ##26 ENSGT00940000154519.g.b.a.a.a.a ##26 ENSGT00940000154519.g.b.a.a.b.a ##26 ENSGT00940000154519.g.b.a.a.a.b.a ##26 ENSGT00940000154931.d.o.b #27 ENSGT00940000154931.d.p #27 ENSGT00940000154931.d.o.a.a #27 ENSGT00940000154519.g.b.a.b ##26 ENSGT00940000154931.d.o.a.b #27 ENSGT00940000154573.k.b #28 ENSGT00940000154573.k.a #28 ENSGT01000000215059 Mus_A ANCESTRAL SPECIES 14 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q.a #14 ENSGT00940000155105.q.b #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.b ##26 ENSGT00940000154519.g.b.a.a.a.a ##26 ENSGT00940000154519.g.a ##26 ENSGT00940000154931.d.o.a.a #27 ENSGT00940000154519.g.b.a.b ##26 ENSGT00940000154573.l #28 ENSGT00940000154931.d.o.a.b #27 ENSGT00940000154573.k.b #28 ENSGT00940000154573.k.a #28 ENSGT01000000215059 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 Ryukyu mouse MODERN SPECIES 4 Nrn1 (MGP_CAROLIEiJ_G0018433) #7 Fars2 (MGP_CAROLIEiJ_G0018432) #8 Lyrm4 (MGP_CAROLIEiJ_G0018431) #9 Ppp1r3g (MGP_CAROLIEiJ_G0018430) Rpp40 (MGP_CAROLIEiJ_G0018429) #11 Cdyl (MGP_CAROLIEiJ_G0018428) #10 Eci2 (MGP_CAROLIEiJ_G0018427) #14 Eci3 (MGP_CAROLIEiJ_G0018426) #14 Tex56 (MGP_CAROLIEiJ_G0018425) #15 MGP_CAROLIEiJ_G0018424 #16 Prpf4b (MGP_CAROLIEiJ_G0018423) #17 Fam50b (MGP_CAROLIEiJ_G0018422) #18 Pxdc1 (MGP_CAROLIEiJ_G0018421) #19 Slc22a23 (MGP_CAROLIEiJ_G0018420) #20 Psmg4 (MGP_CAROLIEiJ_G0018419) #21 MGP_CAROLIEiJ_G0018418 #22 Bphl (MGP_CAROLIEiJ_G0018417) #23 Ripk1 (MGP_CAROLIEiJ_G0018416) #24 Nqo2 (MGP_CAROLIEiJ_G0018415) #25 Serpinb6a (MGP_CAROLIEiJ_G0018414) ##26 Serpinb6c (MGP_CAROLIEiJ_G0018413) ##26 MGP_CAROLIEiJ_G0018412 ##26 MGP_CAROLIEiJ_G0018411 #27 MGP_CAROLIEiJ_G0018410 #27 MGP_CAROLIEiJ_G0018409 #27 Serpinb9 (MGP_CAROLIEiJ_G0018408) #27 Serpinb6b (MGP_CAROLIEiJ_G0018407) ##26 MGP_CAROLIEiJ_G0018406 #28 Serpinb1a (MGP_CAROLIEiJ_G0018405) #28 MGP_CAROLIEiJ_G0018404 Wrnip1 (MGP_CAROLIEiJ_G0018403) #29 Mus_B ANCESTRAL SPECIES 13 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q.a #14 ENSGT00940000155105.q.b #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.b ##26 ENSGT00940000154519.g.b.a.a.a.a ##26 ENSGT00940000154519.g.b.a.a.b.a ##26 ENSGT00940000154519.g.b.a.a.a.b.a ##26 ENSGT00940000154931.d.o.b.a.a #27 ENSGT00940000154931.d.o.b.b #27 ENSGT00940000154931.d.p #27 ENSGT00940000154573.k.b #28 ENSGT00940000154931.d.o.a.b #27 ENSGT00940000154931.d.o.a.a #27 ENSGT00940000154519.g.b.a.b ##26 ENSGT00940000154573.l #28 Mouse DUPLICATION Mouse MODERN SPECIES 4 Nrn1 (ENSMUSG00000039114) #7 Fars2 (ENSMUSG00000021420) #8 Lyrm4 (ENSMUSG00000046573) #9 Ppp1r3g (ENSMUSG00000050423) Rpp40 (ENSMUSG00000021418) #11 Cdyl (ENSMUSG00000059288) #10 Eci2 (ENSMUSG00000021417) #14 Eci3 (ENSMUSG00000021416) #14 Tex56 (ENSMUSG00000021415) #15 Fam217a (ENSMUSG00000021414) #16 Prpf4b (ENSMUSG00000021413) #17 Fam50b (ENSMUSG00000038246) #18 Pxdc1 (ENSMUSG00000021411) #19 Slc22a23 (ENSMUSG00000038267) #20 Psmg4 (ENSMUSG00000071451) #21 Tubb2b (ENSMUSG00000045136) #22 Tubb2a (ENSMUSG00000058672) #22 Bphl (ENSMUSG00000038286) #23 Ripk1 (ENSMUSG00000021408) #24 Nqo2 (ENSMUSG00000046949) #25 Serpinb6a (ENSMUSG00000060147) ##26 Serpinb6c (ENSMUSG00000052180) ##26 Serpinb6e (ENSMUSG00000069248) ##26 Serpinb6d (ENSMUSG00000047889) ##26 Serpinb9g (ENSMUSG00000057726) #27 Serpinb9h (ENSMUSG00000071452) #27 Serpinb9f (ENSMUSG00000038327) #27 Serpinb9e (ENSMUSG00000062342) #27 Serpinb9d (ENSMUSG00000054266) #27 Serpinb9c (ENSMUSG00000021404) #27 Serpinb1b (ENSMUSG00000051029) #28 Mouse MODERN SPECIES 4 Fars2 (ENSMUSG00000021420) #8 Lyrm4 (ENSMUSG00000046573) #9 Ppp1r3g (ENSMUSG00000050423) Rpp40 (ENSMUSG00000021418) #11 Cdyl (ENSMUSG00000059288) #10 Eci2 (ENSMUSG00000021417) #14 Eci3 (ENSMUSG00000021416) #14 Tex56 (ENSMUSG00000021415) #15 Fam217a (ENSMUSG00000021414) #16 Prpf4b (ENSMUSG00000021413) #17 Fam50b (ENSMUSG00000038246) #18 Pxdc1 (ENSMUSG00000021411) #19 Slc22a23 (ENSMUSG00000038267) #20 Psmg4 (ENSMUSG00000071451) #21 Tubb2b (ENSMUSG00000045136) #22 Tubb2a (ENSMUSG00000058672) #22 Bphl (ENSMUSG00000038286) #23 Ripk1 (ENSMUSG00000021408) #24 Nqo2 (ENSMUSG00000046949) #25 Serpinb6a (ENSMUSG00000060147) ##26 Serpinb6c (ENSMUSG00000052180) ##26 Serpinb6e (ENSMUSG00000069248) ##26 Serpinb6d (ENSMUSG00000047889) ##26 Serpinb9g (ENSMUSG00000057726) #27 Serpinb9h (ENSMUSG00000071452) #27 Serpinb9f (ENSMUSG00000038327) #27 Serpinb9e (ENSMUSG00000062342) #27 Serpinb9d (ENSMUSG00000054266) #27 Serpinb9c (ENSMUSG00000021404) #27 Serpinb1b (ENSMUSG00000051029) #28 Serpinb9b (ENSMUSG00000021403) #27 Mus_C ANCESTRAL SPECIES 10 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q.a #14 ENSGT00940000155105.q.b #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.b ##26 ENSGT00940000154519.g.b.a.a.a.a ##26 ENSGT00940000154519.g.b.a.a.b.a ##26 ENSGT00940000154519.g.b.a.a.a.b.a ##26 ENSGT00940000154931.d.o.b.a.a #27 ENSGT00940000154931.d.o.b.a.b #27 ENSGT00940000154931.d.o.b.b #27 ENSGT00940000154931.d.p #27 ENSGT00940000154573.k.b #28 ENSGT00940000154931.d.o.a.b #27 ENSGT00940000154931.d.o.a.a #27 ENSGT00940000154519.g.b.a.b ##26 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2870 Btbd3 (ENSMSIG00000003269) ENSMSIG00000003305 #22 ENSMSIG00000003421 Steppe mouse MODERN SPECIES 2975 ENSMSIG00000002713 #14 Tex56 (ENSMSIG00000002912) #15 Fam217a (ENSMSIG00000002942) #16 Prpf4b (ENSMSIG00000003035) #17 ENSMSIG00000003077 Fam50b (ENSMSIG00000003082) #18 Pxdc1 (ENSMSIG00000003089) #19 Slc22a23 (ENSMSIG00000003104) #20 Psmg4 (ENSMSIG00000003186) #21 Tubb2a (ENSMSIG00000003218) #22 Bphl (ENSMSIG00000003262) #23 Ripk1 (ENSMSIG00000003307) #24 Nqo2 (ENSMSIG00000003346) #25 Serpinb6a (ENSMSIG00000003400) ##26 Serpinb6c (ENSMSIG00000003508) ##26 Serpinb6e (ENSMSIG00000003547) ##26 Serpinb6d (ENSMSIG00000003590) ##26 spretus DUPLICATION spretus DUPLICATION spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019307 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019303 #14 MGP_SPRETEiJ_G0019302 #14 Tex56 (MGP_SPRETEiJ_G0019301) #15 MGP_SPRETEiJ_G0019300 #16 Prpf4b (MGP_SPRETEiJ_G0019299) #17 Fam50b (MGP_SPRETEiJ_G0019298) #18 Pxdc1 (MGP_SPRETEiJ_G0019297) #19 Slc22a23 (MGP_SPRETEiJ_G0019296) #20 Psmg4 (MGP_SPRETEiJ_G0019295) #21 MGP_SPRETEiJ_G0019294 #22 MGP_SPRETEiJ_G0019293 #22 MGP_SPRETEiJ_G0019292 #22 Bphl (MGP_SPRETEiJ_G0019291) #23 Ripk1 (MGP_SPRETEiJ_G0019290) #24 Nqo2 (MGP_SPRETEiJ_G0019289) #25 Serpinb6a (MGP_SPRETEiJ_G0019288) ##26 Serpinb6c (MGP_SPRETEiJ_G0019287) ##26 MGP_SPRETEiJ_G0019286 ##26 Serpinb6d (MGP_SPRETEiJ_G0019285) ##26 MGP_SPRETEiJ_G0019284 #27 MGP_SPRETEiJ_G0019283 #27 MGP_SPRETEiJ_G0019282 #27 MGP_SPRETEiJ_G0019281 #27 MGP_SPRETEiJ_G0019280 #27 Serpinb9c (MGP_SPRETEiJ_G0019279) #27 MGP_SPRETEiJ_G0019278 #27 Serpinb9 (MGP_SPRETEiJ_G0019277) #27 spretus MODERN SPECIES 4 Cdyl (MGP_SPRETEiJ_G0019308) #10 MGP_SPRETEiJ_G0019307 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019303 #14 MGP_SPRETEiJ_G0019302 #14 Tex56 (MGP_SPRETEiJ_G0019301) #15 MGP_SPRETEiJ_G0019300 #16 Prpf4b (MGP_SPRETEiJ_G0019299) #17 Fam50b (MGP_SPRETEiJ_G0019298) #18 Pxdc1 (MGP_SPRETEiJ_G0019297) #19 Slc22a23 (MGP_SPRETEiJ_G0019296) #20 Psmg4 (MGP_SPRETEiJ_G0019295) #21 MGP_SPRETEiJ_G0019294 #22 MGP_SPRETEiJ_G0019293 #22 MGP_SPRETEiJ_G0019292 #22 Bphl (MGP_SPRETEiJ_G0019291) #23 Ripk1 (MGP_SPRETEiJ_G0019290) #24 Nqo2 (MGP_SPRETEiJ_G0019289) #25 Serpinb6a (MGP_SPRETEiJ_G0019288) ##26 Serpinb6c (MGP_SPRETEiJ_G0019287) ##26 MGP_SPRETEiJ_G0019286 ##26 Serpinb6d (MGP_SPRETEiJ_G0019285) ##26 MGP_SPRETEiJ_G0019284 #27 MGP_SPRETEiJ_G0019283 #27 MGP_SPRETEiJ_G0019282 #27 MGP_SPRETEiJ_G0019281 #27 MGP_SPRETEiJ_G0019280 #27 Serpinb9c (MGP_SPRETEiJ_G0019279) #27 MGP_SPRETEiJ_G0019278 #27 spretus MODERN SPECIES 4 Rpp40 (MGP_SPRETEiJ_G0019309) #11 Cdyl (MGP_SPRETEiJ_G0019308) #10 MGP_SPRETEiJ_G0019307 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019303 #14 MGP_SPRETEiJ_G0019302 #14 Tex56 (MGP_SPRETEiJ_G0019301) #15 MGP_SPRETEiJ_G0019300 #16 Prpf4b (MGP_SPRETEiJ_G0019299) #17 Fam50b (MGP_SPRETEiJ_G0019298) #18 Pxdc1 (MGP_SPRETEiJ_G0019297) #19 Slc22a23 (MGP_SPRETEiJ_G0019296) #20 Psmg4 (MGP_SPRETEiJ_G0019295) #21 MGP_SPRETEiJ_G0019294 #22 MGP_SPRETEiJ_G0019293 #22 MGP_SPRETEiJ_G0019292 #22 Bphl (MGP_SPRETEiJ_G0019291) #23 Ripk1 (MGP_SPRETEiJ_G0019290) #24 Nqo2 (MGP_SPRETEiJ_G0019289) #25 Serpinb6a (MGP_SPRETEiJ_G0019288) ##26 Serpinb6c (MGP_SPRETEiJ_G0019287) ##26 MGP_SPRETEiJ_G0019286 ##26 Serpinb6d (MGP_SPRETEiJ_G0019285) ##26 MGP_SPRETEiJ_G0019284 #27 MGP_SPRETEiJ_G0019283 #27 MGP_SPRETEiJ_G0019282 #27 MGP_SPRETEiJ_G0019281 #27 MGP_SPRETEiJ_G0019280 #27 Serpinb9c (MGP_SPRETEiJ_G0019279) #27 Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 7 Fars2 (MGP_PahariEiJ_G0019500) #8 Lyrm4 (MGP_PahariEiJ_G0019499) #9 Ppp1r3g (MGP_PahariEiJ_G0019498) Rpp40 (MGP_PahariEiJ_G0019497) #11 Cdyl (MGP_PahariEiJ_G0019496) #10 Eci2 (MGP_PahariEiJ_G0019495) #14 Eci3 (MGP_PahariEiJ_G0019494) #14 Tex56 (MGP_PahariEiJ_G0019493) #15 MGP_PahariEiJ_G0019492 #16 Prpf4b (MGP_PahariEiJ_G0019491) #17 Fam50b (MGP_PahariEiJ_G0019490) #18 Pxdc1 (MGP_PahariEiJ_G0019489) #19 Slc22a23 (MGP_PahariEiJ_G0019488) #20 Psmg4 (MGP_PahariEiJ_G0019487) #21 Tubb2b (MGP_PahariEiJ_G0019486) #22 MGP_PahariEiJ_G0019485 #22 Bphl (MGP_PahariEiJ_G0019484) #23 Ripk1 (MGP_PahariEiJ_G0019483) #24 Nqo2 (MGP_PahariEiJ_G0019482) #25 Serpinb6a (MGP_PahariEiJ_G0019481) ##26 Serpinb6c (MGP_PahariEiJ_G0019480) ##26 Serpinb6e (MGP_PahariEiJ_G0019479) ##26 Serpinb6d (MGP_PahariEiJ_G0019478) ##26 MGP_PahariEiJ_G0019477 #27 MGP_PahariEiJ_G0019476 #27 MGP_PahariEiJ_G0019475 #27 MGP_PahariEiJ_G0019474 #27 Serpinb9c (MGP_PahariEiJ_G0019473) #27 Serpinb9 (MGP_PahariEiJ_G0019472) #27 Serpinb6b (MGP_PahariEiJ_G0019471) ##26 MGP_PahariEiJ_G0019470 #28 Shrew mouse MODERN SPECIES 7 Nrn1 (MGP_PahariEiJ_G0019501) #7 Fars2 (MGP_PahariEiJ_G0019500) #8 Lyrm4 (MGP_PahariEiJ_G0019499) #9 Ppp1r3g (MGP_PahariEiJ_G0019498) Rpp40 (MGP_PahariEiJ_G0019497) #11 Cdyl (MGP_PahariEiJ_G0019496) #10 Eci2 (MGP_PahariEiJ_G0019495) #14 Eci3 (MGP_PahariEiJ_G0019494) #14 Tex56 (MGP_PahariEiJ_G0019493) #15 MGP_PahariEiJ_G0019492 #16 Prpf4b (MGP_PahariEiJ_G0019491) #17 Fam50b (MGP_PahariEiJ_G0019490) #18 Pxdc1 (MGP_PahariEiJ_G0019489) #19 Slc22a23 (MGP_PahariEiJ_G0019488) #20 Psmg4 (MGP_PahariEiJ_G0019487) #21 Tubb2b (MGP_PahariEiJ_G0019486) #22 MGP_PahariEiJ_G0019485 #22 Bphl (MGP_PahariEiJ_G0019484) #23 Ripk1 (MGP_PahariEiJ_G0019483) #24 Nqo2 (MGP_PahariEiJ_G0019482) #25 Serpinb6a (MGP_PahariEiJ_G0019481) ##26 Serpinb6c (MGP_PahariEiJ_G0019480) ##26 Serpinb6e (MGP_PahariEiJ_G0019479) ##26 Serpinb6d (MGP_PahariEiJ_G0019478) ##26 MGP_PahariEiJ_G0019477 #27 MGP_PahariEiJ_G0019476 #27 MGP_PahariEiJ_G0019475 #27 MGP_PahariEiJ_G0019474 #27 Serpinb9c (MGP_PahariEiJ_G0019473) #27 Serpinb9 (MGP_PahariEiJ_G0019472) #27 Serpinb6b (MGP_PahariEiJ_G0019471) ##26 Cricetidae ANCESTRAL SPECIES 22 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q #14 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.a.c.a ##26 ENSGT00940000154519.g.b.a.d ##26 ENSGT00940000154519.g.b.a.c.b ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT01000000215059 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 Cricetinae ANCESTRAL SPECIES 20 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q #14 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.a.c.a ##26 ENSGT00940000154931.d.i #27 ENSGT00940000154519.g.b.a.c.b ##26 ENSGT00940000154931.d.j #27 ENSGT00940000154573 #28 ENSGT01000000215059 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 623 Fars2 (ENSMAUG00000008493) #8 Lyrm4 (ENSMAUG00000009051) #9 Rpp40 (ENSMAUG00000010268) #11 Cdyl (ENSMAUG00000011510) #10 ENSMAUG00000020164 #14 ENSMAUG00000001515 #14 Tex56 (ENSMAUG00000002707) #15 Fam217a (ENSMAUG00000004346) #16 Prpf4b (ENSMAUG00000007805) #17 ENSMAUG00000015060 Fam50b (ENSMAUG00000001407) #18 Pxdc1 (ENSMAUG00000016900) #19 Slc22a23 (ENSMAUG00000017453) #20 Psmg4 (ENSMAUG00000017755) #21 ENSMAUG00000018054 #22 Tubb2a (ENSMAUG00000018540) #22 Bphl (ENSMAUG00000000408) #23 Ripk1 (ENSMAUG00000000557) #24 Nqo2 (ENSMAUG00000000875) #25 ENSMAUG00000001093 ##26 ENSMAUG00000001439 #27 ENSMAUG00000008075 #27 ENSMAUG00000009098 ##26 ENSMAUG00000009345 #27 ENSMAUG00000009659 #28 Wrnip1 (ENSMAUG00000009914) #29 Mylk4 (ENSMAUG00000011053) #30 Gmds (ENSMAUG00000011976) #31 Foxc1 (ENSMAUG00000018460) Foxf2 (ENSMAUG00000012470) Foxq1 (ENSMAUG00000018519) Golden Hamster MODERN SPECIES 623 Nrn1 (ENSMAUG00000008121) #7 Fars2 (ENSMAUG00000008493) #8 Lyrm4 (ENSMAUG00000009051) #9 Rpp40 (ENSMAUG00000010268) #11 Cdyl (ENSMAUG00000011510) #10 ENSMAUG00000020164 #14 ENSMAUG00000001515 #14 Tex56 (ENSMAUG00000002707) #15 Fam217a (ENSMAUG00000004346) #16 Prpf4b (ENSMAUG00000007805) #17 ENSMAUG00000015060 Fam50b (ENSMAUG00000001407) #18 Pxdc1 (ENSMAUG00000016900) #19 Slc22a23 (ENSMAUG00000017453) #20 Psmg4 (ENSMAUG00000017755) #21 ENSMAUG00000018054 #22 Tubb2a (ENSMAUG00000018540) #22 Bphl (ENSMAUG00000000408) #23 Ripk1 (ENSMAUG00000000557) #24 Nqo2 (ENSMAUG00000000875) #25 ENSMAUG00000001093 ##26 ENSMAUG00000001439 #27 ENSMAUG00000008075 #27 ENSMAUG00000009098 ##26 ENSMAUG00000009345 #27 ENSMAUG00000009659 #28 Wrnip1 (ENSMAUG00000009914) #29 Mylk4 (ENSMAUG00000011053) #30 Gmds (ENSMAUG00000011976) #31 Foxc1 (ENSMAUG00000018460) Foxf2 (ENSMAUG00000012470) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 317 Nrn1 (ENSCGRG00001017665) #7 ENSCGRG00001012890 Fars2 (ENSCGRG00001022626) #8 Lyrm4 (ENSCGRG00001020406) #9 Ppp1r3g (ENSCGRG00001001814) Rpp40 (ENSCGRG00001018328) #11 ENSCGRG00001013878 Cdyl (ENSCGRG00001002703) #10 ENSCGRG00001021795 #14 Fam217a (ENSCGRG00001020164) #16 Prpf4b (ENSCGRG00001019388) #17 Fam50b (ENSCGRG00001009274) #18 Pxdc1 (ENSCGRG00001021838) #19 Slc22a23 (ENSCGRG00001010789) #20 Psmg4 (ENSCGRG00001017753) #21 Tubb2b (ENSCGRG00001008382) #22 Tubb2a (ENSCGRG00001020515) #22 Bphl (ENSCGRG00001014124) #23 Ripk1 (ENSCGRG00001014419) #24 Nqo2 (ENSCGRG00001004425) #25 ENSCGRG00001015437 ##26 ENSCGRG00001020665 ##26 ENSCGRG00001022043 #27 ENSCGRG00001021359 ENSCGRG00001014514 #27 ENSCGRG00001009851 ENSCGRG00001000139 #28 ENSCGRG00001007544 Wrnip1 (ENSCGRG00001020075) #29 Mylk4 (ENSCGRG00001012998) #30 ENSCGRG00001020761 Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001012890 Fars2 (ENSCGRG00001022626) #8 Lyrm4 (ENSCGRG00001020406) #9 Ppp1r3g (ENSCGRG00001001814) Rpp40 (ENSCGRG00001018328) #11 ENSCGRG00001013878 Cdyl (ENSCGRG00001002703) #10 ENSCGRG00001021795 #14 Fam217a (ENSCGRG00001020164) #16 Prpf4b (ENSCGRG00001019388) #17 Fam50b (ENSCGRG00001009274) #18 Pxdc1 (ENSCGRG00001021838) #19 Slc22a23 (ENSCGRG00001010789) #20 Psmg4 (ENSCGRG00001017753) #21 Tubb2b (ENSCGRG00001008382) #22 Tubb2a (ENSCGRG00001020515) #22 Bphl (ENSCGRG00001014124) #23 Ripk1 (ENSCGRG00001014419) #24 Nqo2 (ENSCGRG00001004425) #25 ENSCGRG00001015437 ##26 ENSCGRG00001020665 ##26 ENSCGRG00001022043 #27 ENSCGRG00001021359 ENSCGRG00001014514 #27 ENSCGRG00001009851 ENSCGRG00001000139 #28 ENSCGRG00001007544 Wrnip1 (ENSCGRG00001020075) #29 Mylk4 (ENSCGRG00001012998) #30 ENSCGRG00001020761 Gmds (ENSCGRG00001014163) #31 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105.q #14 ENSGT00940000155105.r #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b.a.c.a ##26 ENSGT00940000154519.g.b.a.d ##26 ENSGT00940000154931.d #27 ENSGT00940000154573 #28 ENSGT01000000215059 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Northern American deer mouse MODERN SPECIES 18 Fars2 (ENSPEMG00000017477) #8 Lyrm4 (ENSPEMG00000030913) #9 Ppp1r3g (ENSPEMG00000014441) Rpp40 (ENSPEMG00000020809) #11 Cdyl (ENSPEMG00000022690) #10 ENSPEMG00000021110 #14 ENSPEMG00000021161 #14 Tex56 (ENSPEMG00000020583) #15 Fam217a (ENSPEMG00000020354) #16 Prpf4b (ENSPEMG00000020358) #17 ENSPEMG00000031049 Fam50b (ENSPEMG00000024324) #18 Pxdc1 (ENSPEMG00000021893) #19 Slc22a23 (ENSPEMG00000020810) #20 Psmg4 (ENSPEMG00000020434) #21 Tubb2b (ENSPEMG00000008538) #22 ENSPEMG00000028800 Bphl (ENSPEMG00000020657) #23 Ripk1 (ENSPEMG00000014892) #24 Nqo2 (ENSPEMG00000022103) #25 ENSPEMG00000030940 ##26 ENSPEMG00000006842 ##26 ENSPEMG00000011189 #27 ENSPEMG00000029739 ##26 ENSPEMG00000025946 #27 ENSPEMG00000007216 #27 ENSPEMG00000007226 ##26 ENSPEMG00000024282 #27 ENSPEMG00000003771 #28 ENSPEMG00000030799 Wrnip1 (ENSPEMG00000000543) #29 Prairie vole DUPLICATION Prairie vole MODERN SPECIES 3 Nrn1 (ENSMOCG00000015236) #7 Fars2 (ENSMOCG00000021203) #8 Lyrm4 (ENSMOCG00000015484) #9 Ppp1r3g (ENSMOCG00000005122) Rpp40 (ENSMOCG00000000305) #11 Cdyl (ENSMOCG00000012115) #10 ENSMOCG00000009658 #14 ENSMOCG00000006528 #14 Tex56 (ENSMOCG00000011556) #15 Fam217a (ENSMOCG00000021508) #16 Prpf4b (ENSMOCG00000022394) #17 Fam50b (ENSMOCG00000009994) #18 Pxdc1 (ENSMOCG00000020484) #19 Slc22a23 (ENSMOCG00000009539) #20 Psmg4 (ENSMOCG00000020506) #21 Tubb2b (ENSMOCG00000021829) #22 Tubb2a (ENSMOCG00000021775) #22 Bphl (ENSMOCG00000012434) #23 Ripk1 (ENSMOCG00000002677) #24 Nqo2 (ENSMOCG00000007454) #25 ENSMOCG00000000484 ##26 ENSMOCG00000016676 ##26 ENSMOCG00000019022 ENSMOCG00000011182 ##26 ENSMOCG00000004352 #27 ENSMOCG00000010614 #27 ENSMOCG00000016281 ##26 ENSMOCG00000000987 #27 ENSMOCG00000021377 #28 Wrnip1 (ENSMOCG00000002819) #29 ENSMOCG00000019965 Prairie vole MODERN SPECIES 3 Fars2 (ENSMOCG00000021203) #8 Lyrm4 (ENSMOCG00000015484) #9 Ppp1r3g (ENSMOCG00000005122) Rpp40 (ENSMOCG00000000305) #11 Cdyl (ENSMOCG00000012115) #10 ENSMOCG00000009658 #14 ENSMOCG00000006528 #14 Tex56 (ENSMOCG00000011556) #15 Fam217a (ENSMOCG00000021508) #16 Prpf4b (ENSMOCG00000022394) #17 Fam50b (ENSMOCG00000009994) #18 Pxdc1 (ENSMOCG00000020484) #19 Slc22a23 (ENSMOCG00000009539) #20 Psmg4 (ENSMOCG00000020506) #21 Tubb2b (ENSMOCG00000021829) #22 Tubb2a (ENSMOCG00000021775) #22 Bphl (ENSMOCG00000012434) #23 Ripk1 (ENSMOCG00000002677) #24 Nqo2 (ENSMOCG00000007454) #25 ENSMOCG00000000484 ##26 ENSMOCG00000016676 ##26 ENSMOCG00000019022 ENSMOCG00000011182 ##26 ENSMOCG00000004352 #27 ENSMOCG00000010614 #27 ENSMOCG00000016281 ##26 ENSMOCG00000000987 #27 ENSMOCG00000021377 #28 Wrnip1 (ENSMOCG00000002819) #29 ENSMOCG00000019965 Mylk4 (ENSMOCG00000014428) #30 Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 220 ENSDORG00000024731 #22 ENSDORG00000029362 #22 Kangaroo rat MODERN SPECIES 220 ENSDORG00000024731 #22 ENSDORG00000029362 #22 Kangaroo rat MODERN SPECIES 221 ENSDORG00000027765 #22 Kangaroo rat MODERN SPECIES 351 Nqo2 (ENSDORG00000010390) #25 Ripk1 (ENSDORG00000010392) #24 ENSDORG00000029944 #11 ENSDORG00000011196 #11 ENSDORG00000028660 Cdyl (ENSDORG00000002812) #10 ENSDORG00000023689 ENSDORG00000004072 #14 Tex56 (ENSDORG00000024679) #15 ENSDORG00000025392 ENSDORG00000025074 #16 Prpf4b (ENSDORG00000000464) #17 Pxdc1 (ENSDORG00000029672) #19 Slc22a23 (ENSDORG00000010217) #20 ENSDORG00000010216 #21 Tubb2b (ENSDORG00000029767) #22 ENSDORG00000025335 ENSDORG00000030064 #22 Bphl (ENSDORG00000012891) #23 Lyrm4 (ENSDORG00000029399) #9 Fars2 (ENSDORG00000014796) #8 Nrn1 (ENSDORG00000028098) #7 F13a1 (ENSDORG00000005435) Ly86 (ENSDORG00000009360) Rreb1 (ENSDORG00000006979) Ssr1 (ENSDORG00000009319) Cage1 (ENSDORG00000004490) Riok1 (ENSDORG00000008530) Dsp (ENSDORG00000000359) Snrnp48 (ENSDORG00000015140) Bmp6 (ENSDORG00000004681) Kangaroo rat MODERN SPECIES 351 ENSDORG00000029944 #11 ENSDORG00000011196 #11 ENSDORG00000028660 Cdyl (ENSDORG00000002812) #10 ENSDORG00000023689 ENSDORG00000004072 #14 Tex56 (ENSDORG00000024679) #15 ENSDORG00000025392 ENSDORG00000025074 #16 Prpf4b (ENSDORG00000000464) #17 Pxdc1 (ENSDORG00000029672) #19 Slc22a23 (ENSDORG00000010217) #20 ENSDORG00000010216 #21 Tubb2b (ENSDORG00000029767) #22 ENSDORG00000025335 ENSDORG00000030064 #22 Bphl (ENSDORG00000012891) #23 Lyrm4 (ENSDORG00000029399) #9 Fars2 (ENSDORG00000014796) #8 Nrn1 (ENSDORG00000028098) #7 F13a1 (ENSDORG00000005435) Ly86 (ENSDORG00000009360) Rreb1 (ENSDORG00000006979) Ssr1 (ENSDORG00000009319) Cage1 (ENSDORG00000004490) Riok1 (ENSDORG00000008530) Dsp (ENSDORG00000000359) Snrnp48 (ENSDORG00000015140) Bmp6 (ENSDORG00000004681) Txndc5 (ENSDORG00000004682) ENSDORG00000027767 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 1075 ENSTBEG00000004854 #22 ENSTBEG00000004015 #22 ENSTBEG00000003715 Tree shrew MODERN SPECIES 1075 ENSTBEG00000004854 #22 ENSTBEG00000004015 #22 ENSTBEG00000003715 Primates ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT01000000214902 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 141 NRN1 (ENSOGAG00000027827) #7 FARS2 (ENSOGAG00000001040) #8 ENSOGAG00000015193 PPP1R3G (ENSOGAG00000034237) RPP40 (ENSOGAG00000006055) #11 ENSOGAG00000015920 #10 ECI2 (ENSOGAG00000011635) #14 ENSOGAG00000011631 #15 FAM217A (ENSOGAG00000011629) #16 PRPF4B (ENSOGAG00000033081) #17 FAM50B (ENSOGAG00000016493) #18 PXDC1 (ENSOGAG00000016490) #19 SLC22A23 (ENSOGAG00000003183) #20 ENSOGAG00000027336 #21 TUBB2B (ENSOGAG00000032955) #22 ENSOGAG00000007496 #22 BPHL (ENSOGAG00000007494) #23 RIPK1 (ENSOGAG00000007491) #24 NQO2 (ENSOGAG00000029985) #25 SERPINB6 (ENSOGAG00000028420) ##26 SERPINB9 (ENSOGAG00000029897) #27 ENSOGAG00000002491 #28 Bushbaby MODERN SPECIES 141 F13A1 (ENSOGAG00000001042) NRN1 (ENSOGAG00000027827) #7 FARS2 (ENSOGAG00000001040) #8 ENSOGAG00000015193 PPP1R3G (ENSOGAG00000034237) RPP40 (ENSOGAG00000006055) #11 ENSOGAG00000015920 #10 ECI2 (ENSOGAG00000011635) #14 ENSOGAG00000011631 #15 FAM217A (ENSOGAG00000011629) #16 PRPF4B (ENSOGAG00000033081) #17 FAM50B (ENSOGAG00000016493) #18 PXDC1 (ENSOGAG00000016490) #19 SLC22A23 (ENSOGAG00000003183) #20 ENSOGAG00000027336 #21 TUBB2B (ENSOGAG00000032955) #22 ENSOGAG00000007496 #22 BPHL (ENSOGAG00000007494) #23 RIPK1 (ENSOGAG00000007491) #24 NQO2 (ENSOGAG00000029985) #25 SERPINB6 (ENSOGAG00000028420) ##26 SERPINB9 (ENSOGAG00000029897) #27 ENSOGAG00000002491 #28 Lemuriformes ANCESTRAL SPECIES 63 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Lemuriformes_a ANCESTRAL SPECIES 166 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155105 #14 ENSGT00940000168960 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Greater bamboo lemur MODERN SPECIES 610 ENSPSMG00000020920 ECI2 (ENSPSMG00000020985) #14 ENSPSMG00000020994 #15 FAM217A (ENSPSMG00000021011) #16 PRPF4B (ENSPSMG00000021046) #17 FAM50B (ENSPSMG00000021061) #18 PXDC1 (ENSPSMG00000021073) #19 SLC22A23 (ENSPSMG00000021123) #20 PSMG4 (ENSPSMG00000021142) #21 ENSPSMG00000021152 #22 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 497 SLC22A23 (ENSPCOG00000007966) #20 PSMG4 (ENSPCOG00000014849) #21 ENSPCOG00000020515 #22 TUBB2B (ENSPCOG00000015941) #22 BPHL (ENSPCOG00000020939) #23 RIPK1 (ENSPCOG00000024336) #24 NQO2 (ENSPCOG00000017951) #25 SERPINB6 (ENSPCOG00000019023) ##26 SERPINB9 (ENSPCOG00000025594) #27 SERPINB1 (ENSPCOG00000003266) #28 WRNIP1 (ENSPCOG00000017172) #29 ENSPCOG00000020178 MYLK4 (ENSPCOG00000026431) #30 ENSPCOG00000019865 GMDS (ENSPCOG00000028639) #31 FOXC1 (ENSPCOG00000026920) FOXF2 (ENSPCOG00000022131) Coquerels sifaka MODERN SPECIES 497 SLC22A23 (ENSPCOG00000007966) #20 PSMG4 (ENSPCOG00000014849) #21 ENSPCOG00000020515 #22 TUBB2B (ENSPCOG00000015941) #22 BPHL (ENSPCOG00000020939) #23 RIPK1 (ENSPCOG00000024336) #24 NQO2 (ENSPCOG00000017951) #25 SERPINB6 (ENSPCOG00000019023) ##26 SERPINB9 (ENSPCOG00000025594) #27 SERPINB1 (ENSPCOG00000003266) #28 WRNIP1 (ENSPCOG00000017172) #29 ENSPCOG00000020178 MYLK4 (ENSPCOG00000026431) #30 ENSPCOG00000019865 GMDS (ENSPCOG00000028639) #31 FOXC1 (ENSPCOG00000026920) FOXF2 (ENSPCOG00000022131) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 5 RREB1 (ENSMICG00000003683) LY86 (ENSMICG00000016183) F13A1 (ENSMICG00000011731) NRN1 (ENSMICG00000003842) #7 FARS2 (ENSMICG00000003828) #8 LYRM4 (ENSMICG00000028549) #9 RPP40 (ENSMICG00000003297) #11 ENSMICG00000011268 #10 ECI2 (ENSMICG00000007925) #14 ENSMICG00000007923 #15 FAM217A (ENSMICG00000011781) #16 PRPF4B (ENSMICG00000011768) #17 PXDC1 (ENSMICG00000027387) #19 SLC22A23 (ENSMICG00000010664) #20 ENSMICG00000027920 #21 ENSMICG00000000129 #22 TUBB2B (ENSMICG00000010649) #22 ENSMICG00000026983 #22 BPHL (ENSMICG00000010641) #23 RIPK1 (ENSMICG00000010628) #24 NQO2 (ENSMICG00000010625) #25 ENSMICG00000038515 ENSMICG00000041621 SERPINB6 (ENSMICG00000001981) ##26 ENSMICG00000033572 SERPINB9 (ENSMICG00000032410) #27 SERPINB1 (ENSMICG00000016870) #28 WRNIP1 (ENSMICG00000031945) #29 MYLK4 (ENSMICG00000031773) #30 GMDS (ENSMICG00000047521) #31 ENSMICG00000030022 Mouse lemur MODERN SPECIES 5 LY86 (ENSMICG00000016183) F13A1 (ENSMICG00000011731) NRN1 (ENSMICG00000003842) #7 FARS2 (ENSMICG00000003828) #8 LYRM4 (ENSMICG00000028549) #9 RPP40 (ENSMICG00000003297) #11 ENSMICG00000011268 #10 ECI2 (ENSMICG00000007925) #14 ENSMICG00000007923 #15 FAM217A (ENSMICG00000011781) #16 PRPF4B (ENSMICG00000011768) #17 PXDC1 (ENSMICG00000027387) #19 SLC22A23 (ENSMICG00000010664) #20 ENSMICG00000027920 #21 ENSMICG00000000129 #22 TUBB2B (ENSMICG00000010649) #22 ENSMICG00000026983 #22 BPHL (ENSMICG00000010641) #23 RIPK1 (ENSMICG00000010628) #24 NQO2 (ENSMICG00000010625) #25 ENSMICG00000038515 ENSMICG00000041621 SERPINB6 (ENSMICG00000001981) ##26 ENSMICG00000033572 SERPINB9 (ENSMICG00000032410) #27 SERPINB1 (ENSMICG00000016870) #28 WRNIP1 (ENSMICG00000031945) #29 MYLK4 (ENSMICG00000031773) #30 GMDS (ENSMICG00000047521) #31 ENSMICG00000030022 FOXF2 (ENSMICG00000029665) Mouse lemur MODERN SPECIES 5 F13A1 (ENSMICG00000011731) NRN1 (ENSMICG00000003842) #7 FARS2 (ENSMICG00000003828) #8 LYRM4 (ENSMICG00000028549) #9 RPP40 (ENSMICG00000003297) #11 ENSMICG00000011268 #10 ECI2 (ENSMICG00000007925) #14 ENSMICG00000007923 #15 FAM217A (ENSMICG00000011781) #16 PRPF4B (ENSMICG00000011768) #17 PXDC1 (ENSMICG00000027387) #19 SLC22A23 (ENSMICG00000010664) #20 ENSMICG00000027920 #21 ENSMICG00000000129 #22 TUBB2B (ENSMICG00000010649) #22 ENSMICG00000026983 #22 BPHL (ENSMICG00000010641) #23 RIPK1 (ENSMICG00000010628) #24 NQO2 (ENSMICG00000010625) #25 ENSMICG00000038515 ENSMICG00000041621 SERPINB6 (ENSMICG00000001981) ##26 ENSMICG00000033572 SERPINB9 (ENSMICG00000032410) #27 SERPINB1 (ENSMICG00000016870) #28 WRNIP1 (ENSMICG00000031945) #29 MYLK4 (ENSMICG00000031773) #30 GMDS (ENSMICG00000047521) #31 ENSMICG00000030022 FOXF2 (ENSMICG00000029665) ENSMICG00000043294 Haplorrhini ANCESTRAL SPECIES 2 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Simiiformes ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Catarrhini ANCESTRAL SPECIES 5 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00910000147563 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00910000147563 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Rhinopithecus ANCESTRAL SPECIES 233 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154632.q.a.a.b ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00910000147563 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 Black snub-nosed monkey MODERN SPECIES 1511 RPP40 (ENSRBIG00000035800) #11 CDYL (ENSRBIG00000041073) #10 ENSRBIG00000041293 #14 ENSRBIG00000037967 #15 ENSRBIG00000038999 FAM217A (ENSRBIG00000032885) #16 PRPF4B (ENSRBIG00000033308) #17 ENSRBIG00000043910 FAM50B (ENSRBIG00000005193) #18 ENSRBIG00000030150 PXDC1 (ENSRBIG00000034887) #19 ENSRBIG00000028534 SLC22A23 (ENSRBIG00000033453) #20 PSMG4 (ENSRBIG00000030513) #21 TUBB2B (ENSRBIG00000044962) #22 BPHL (ENSRBIG00000023282) #23 RIPK1 (ENSRBIG00000044016) #24 NQO2 (ENSRBIG00000031353) #25 ENSRBIG00000023655 SERPINB6 (ENSRBIG00000035085) ##26 SERPINB9 (ENSRBIG00000044955) #27 SERPINB1 (ENSRBIG00000035002) #28 WRNIP1 (ENSRBIG00000030451) #29 MYLK4 (ENSRBIG00000036683) #30 GMDS (ENSRBIG00000032090) #31 ENSRBIG00000024296 FOXF2 (ENSRBIG00000040570) EXOC2 (ENSRBIG00000000949) HUS1B (ENSRBIG00000029067) XRCC4 (ENSRBIG00000035524) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 985 PXDC1 (ENSRROG00000038805) #19 ENSRROG00000034402 SLC22A23 (ENSRROG00000043800) #20 PSMG4 (ENSRROG00000025040) #21 TUBB2B (ENSRROG00000027371) #22 BPHL (ENSRROG00000024570) #23 RIPK1 (ENSRROG00000035266) #24 NQO2 (ENSRROG00000032281) #25 ENSRROG00000025624 SERPINB6 (ENSRROG00000042629) ##26 SERPINB9 (ENSRROG00000029131) #27 SERPINB1 (ENSRROG00000029468) #28 WRNIP1 (ENSRROG00000030448) #29 MYLK4 (ENSRROG00000038081) #30 GMDS (ENSRROG00000030799) #31 Golden snub-nosed monkey MODERN SPECIES 36 ENSRROG00000035069 #22 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000157289.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a.a.b Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 8 F13A1 (ENSCSAG00000007361) NRN1 (ENSCSAG00000007350) #7 FARS2 (ENSCSAG00000007344) #8 LYRM4 (ENSCSAG00000007314) #9 PPP1R3G (ENSCSAG00000019110) RPP40 (ENSCSAG00000007307) #11 CDYL (ENSCSAG00000007301) #10 ECI2 (ENSCSAG00000007294) #14 ENSCSAG00000007286 #15 FAM217A (ENSCSAG00000007279) #16 PRPF4B (ENSCSAG00000007273) #17 FAM50B (ENSCSAG00000019111) #18 PXDC1 (ENSCSAG00000007263) #19 SLC22A23 (ENSCSAG00000007261) #20 PSMG4 (ENSCSAG00000007253) #21 TUBB2B (ENSCSAG00000007249) #22 TUBB2A (ENSCSAG00000007247) #22 BPHL (ENSCSAG00000007243) #23 RIPK1 (ENSCSAG00000007224) #24 NQO2 (ENSCSAG00000007218) #25 SERPINB6 (ENSCSAG00000007210) ##26 SERPINB9 (ENSCSAG00000007207) #27 SERPINB1 (ENSCSAG00000007203) #28 WRNIP1 (ENSCSAG00000007198) #29 MYLK4 (ENSCSAG00000007191) #30 ENSCSAG00000007184 #31 FOXC1 (ENSCSAG00000019112) FOXF2 (ENSCSAG00000007180) FOXQ1 (ENSCSAG00000019113) ENSCSAG00000007177 EXOC2 (ENSCSAG00000007171) Vervet Monkey MODERN SPECIES 8 NRN1 (ENSCSAG00000007350) #7 FARS2 (ENSCSAG00000007344) #8 LYRM4 (ENSCSAG00000007314) #9 PPP1R3G (ENSCSAG00000019110) RPP40 (ENSCSAG00000007307) #11 CDYL (ENSCSAG00000007301) #10 ECI2 (ENSCSAG00000007294) #14 ENSCSAG00000007286 #15 FAM217A (ENSCSAG00000007279) #16 PRPF4B (ENSCSAG00000007273) #17 FAM50B (ENSCSAG00000019111) #18 PXDC1 (ENSCSAG00000007263) #19 SLC22A23 (ENSCSAG00000007261) #20 PSMG4 (ENSCSAG00000007253) #21 TUBB2B (ENSCSAG00000007249) #22 TUBB2A (ENSCSAG00000007247) #22 BPHL (ENSCSAG00000007243) #23 RIPK1 (ENSCSAG00000007224) #24 NQO2 (ENSCSAG00000007218) #25 SERPINB6 (ENSCSAG00000007210) ##26 SERPINB9 (ENSCSAG00000007207) #27 SERPINB1 (ENSCSAG00000007203) #28 WRNIP1 (ENSCSAG00000007198) #29 MYLK4 (ENSCSAG00000007191) #30 ENSCSAG00000007184 #31 FOXC1 (ENSCSAG00000019112) FOXF2 (ENSCSAG00000007180) FOXQ1 (ENSCSAG00000019113) ENSCSAG00000007177 EXOC2 (ENSCSAG00000007171) IRF4 (ENSCSAG00000007164) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Cercopithecinae_b ANCESTRAL SPECIES 37 ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Olive baboon MODERN SPECIES 16 FARS2 (ENSPANG00000018208) #8 ENSPANG00000023576 ENSPANG00000046029 RPP40 (ENSPANG00000017865) #11 ENSPANG00000045914 CDYL (ENSPANG00000023577) #10 ECI2 (ENSPANG00000025189) #14 ENSPANG00000021758 #15 FAM217A (ENSPANG00000009605) #16 PRPF4B (ENSPANG00000008444) #17 ENSPANG00000039354 FAM50B (ENSPANG00000006202) #18 ENSPANG00000037486 #19 SLC22A23 (ENSPANG00000023485) #20 PSMG4 (ENSPANG00000007366) #21 TUBB2B (ENSPANG00000047634) #22 RIPK1 (ENSPANG00000024400) #24 ENSPANG00000038780 ENSPANG00000033442 NQO2 (ENSPANG00000033064) #25 ENSPANG00000015755 #27 SERPINB1 (ENSPANG00000030460) #28 ENSPANG00000041893 WRNIP1 (ENSPANG00000044052) #29 MYLK4 (ENSPANG00000007409) #30 GMDS (ENSPANG00000020544) #31 FOXC1 (ENSPANG00000011156) FOXF2 (ENSPANG00000044013) FOXQ1 (ENSPANG00000037731) EXOC2 (ENSPANG00000010769) IRF4 (ENSPANG00000023389) Cercopithecinae_d ANCESTRAL SPECIES 41 ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Sooty mangabey MODERN SPECIES 247 ECI2 (ENSCATG00000039055) #14 ENSCATG00000034182 ENSCATG00000038905 #15 FAM217A (ENSCATG00000045004) #16 PRPF4B (ENSCATG00000039868) #17 FAM50B (ENSCATG00000019736) #18 PXDC1 (ENSCATG00000034625) #19 SLC22A23 (ENSCATG00000022177) #20 PSMG4 (ENSCATG00000036332) #21 TUBB2B (ENSCATG00000017036) #22 BPHL (ENSCATG00000032656) #23 RIPK1 (ENSCATG00000032918) #24 ENSCATG00000021756 NQO2 (ENSCATG00000027170) #25 SERPINB6 (ENSCATG00000030479) ##26 SERPINB1 (ENSCATG00000039910) #28 WRNIP1 (ENSCATG00000041978) #29 MYLK4 (ENSCATG00000036658) #30 ENSCATG00000033597 GMDS (ENSCATG00000039562) #31 ENSCATG00000043623 FOXF2 (ENSCATG00000005462) FOXQ1 (ENSCATG00000017933) HUS1B (ENSCATG00000008071) EXOC2 (ENSCATG00000037603) Drill DUPLICATION Drill MODERN SPECIES 899 ENSMLEG00000030282 ENSMLEG00000034332 ENSMLEG00000041575 RPP40 (ENSMLEG00000040851) #11 CDYL (ENSMLEG00000010888) #10 ECI2 (ENSMLEG00000033204) #14 ENSMLEG00000037689 ENSMLEG00000031291 #15 FAM217A (ENSMLEG00000039857) #16 PRPF4B (ENSMLEG00000030421) #17 ENSMLEG00000021954 FAM50B (ENSMLEG00000005931) #18 PXDC1 (ENSMLEG00000037642) #19 SLC22A23 (ENSMLEG00000029569) #20 PSMG4 (ENSMLEG00000035294) #21 TUBB2B (ENSMLEG00000037972) #22 ENSMLEG00000034009 #22 BPHL (ENSMLEG00000033802) #23 RIPK1 (ENSMLEG00000025829) #24 ENSMLEG00000033411 NQO2 (ENSMLEG00000044409) #25 SERPINB6 (ENSMLEG00000013840) ##26 SERPINB9 (ENSMLEG00000028963) #27 SERPINB1 (ENSMLEG00000031662) #28 ENSMLEG00000011844 #29 MYLK4 (ENSMLEG00000043022) #30 ENSMLEG00000041640 ENSMLEG00000044127 ENSMLEG00000027734 ENSMLEG00000019226 EXOC2 (ENSMLEG00000033278) Drill MODERN SPECIES 899 ENSMLEG00000034332 ENSMLEG00000041575 RPP40 (ENSMLEG00000040851) #11 CDYL (ENSMLEG00000010888) #10 ECI2 (ENSMLEG00000033204) #14 ENSMLEG00000037689 ENSMLEG00000031291 #15 FAM217A (ENSMLEG00000039857) #16 PRPF4B (ENSMLEG00000030421) #17 ENSMLEG00000021954 FAM50B (ENSMLEG00000005931) #18 PXDC1 (ENSMLEG00000037642) #19 SLC22A23 (ENSMLEG00000029569) #20 PSMG4 (ENSMLEG00000035294) #21 TUBB2B (ENSMLEG00000037972) #22 ENSMLEG00000034009 #22 BPHL (ENSMLEG00000033802) #23 RIPK1 (ENSMLEG00000025829) #24 ENSMLEG00000033411 NQO2 (ENSMLEG00000044409) #25 SERPINB6 (ENSMLEG00000013840) ##26 SERPINB9 (ENSMLEG00000028963) #27 SERPINB1 (ENSMLEG00000031662) #28 ENSMLEG00000011844 #29 MYLK4 (ENSMLEG00000043022) #30 ENSMLEG00000041640 ENSMLEG00000044127 ENSMLEG00000027734 ENSMLEG00000019226 EXOC2 (ENSMLEG00000033278) IRF4 (ENSMLEG00000004768) Macaca ANCESTRAL SPECIES 23 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a.a.b Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 136 ENSMNEG00000045067 ENSMNEG00000003878 RPP40 (ENSMNEG00000041986) #11 CDYL (ENSMNEG00000038983) #10 ECI2 (ENSMNEG00000000039) #14 ENSMNEG00000034908 ENSMNEG00000020877 #15 FAM217A (ENSMNEG00000035674) #16 PRPF4B (ENSMNEG00000036107) #17 ENSMNEG00000039272 FAM50B (ENSMNEG00000017045) #18 PXDC1 (ENSMNEG00000029513) #19 ENSMNEG00000040334 SLC22A23 (ENSMNEG00000035865) #20 PSMG4 (ENSMNEG00000045254) #21 TUBB2B (ENSMNEG00000000042) #22 ENSMNEG00000030834 #22 BPHL (ENSMNEG00000034992) #23 RIPK1 (ENSMNEG00000029731) #24 ENSMNEG00000030982 NQO2 (ENSMNEG00000039080) #25 SERPINB6 (ENSMNEG00000038077) ##26 SERPINB9 (ENSMNEG00000018071) #27 SERPINB1 (ENSMNEG00000031098) #28 WRNIP1 (ENSMNEG00000032509) #29 MYLK4 (ENSMNEG00000033807) #30 ENSMNEG00000035768 ENSMNEG00000036375 GMDS (ENSMNEG00000035111) #31 FOXC1 (ENSMNEG00000006978) Pig-tailed macaque MODERN SPECIES 136 ENSMNEG00000003878 RPP40 (ENSMNEG00000041986) #11 CDYL (ENSMNEG00000038983) #10 ECI2 (ENSMNEG00000000039) #14 ENSMNEG00000034908 ENSMNEG00000020877 #15 FAM217A (ENSMNEG00000035674) #16 PRPF4B (ENSMNEG00000036107) #17 ENSMNEG00000039272 FAM50B (ENSMNEG00000017045) #18 PXDC1 (ENSMNEG00000029513) #19 ENSMNEG00000040334 SLC22A23 (ENSMNEG00000035865) #20 PSMG4 (ENSMNEG00000045254) #21 TUBB2B (ENSMNEG00000000042) #22 ENSMNEG00000030834 #22 BPHL (ENSMNEG00000034992) #23 RIPK1 (ENSMNEG00000029731) #24 ENSMNEG00000030982 NQO2 (ENSMNEG00000039080) #25 SERPINB6 (ENSMNEG00000038077) ##26 SERPINB9 (ENSMNEG00000018071) #27 SERPINB1 (ENSMNEG00000031098) #28 WRNIP1 (ENSMNEG00000032509) #29 MYLK4 (ENSMNEG00000033807) #30 ENSMNEG00000035768 ENSMNEG00000036375 GMDS (ENSMNEG00000035111) #31 FOXC1 (ENSMNEG00000006978) Macaca_a ANCESTRAL SPECIES 24 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00910000147352 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Crab-eating macaque MODERN SPECIES 14 F13A1 (ENSMFAG00000001306) NRN1 (ENSMFAG00000062211) #7 FARS2 (ENSMFAG00000043484) #8 ENSMFAG00000002120 #9 ENSMFAG00000054956 RPP40 (ENSMFAG00000043100) #11 CDYL (ENSMFAG00000042478) #10 ENSMFAG00000061853 ECI2 (ENSMFAG00000039175) #14 ENSMFAG00000044085 #15 FAM217A (ENSMFAG00000044867) #16 PRPF4B (ENSMFAG00000018980) #17 PXDC1 (ENSMFAG00000044456) #19 SLC22A23 (ENSMFAG00000034156) #20 PSMG4 (ENSMFAG00000039884) #21 ENSMFAG00000003772 #22 BPHL (ENSMFAG00000041437) #23 RIPK1 (ENSMFAG00000037119) #24 ENSMFAG00000043217 NQO2 (ENSMFAG00000035954) #25 SERPINB6 (ENSMFAG00000043844) ##26 SERPINB9 (ENSMFAG00000042251) #27 SERPINB1 (ENSMFAG00000001421) #28 WRNIP1 (ENSMFAG00000001313) #29 MYLK4 (ENSMFAG00000057340) #30 GMDS (ENSMFAG00000031316) #31 FOXF2 (ENSMFAG00000036369) FOXQ1 (ENSMFAG00000062586) EXOC2 (ENSMFAG00000045215) IRF4 (ENSMFAG00000045100) DUSP22 (ENSMFAG00000034531) Rhesus MODERN SPECIES 14 ENSMMUG00000057424 ENSMMUG00000049865 PPP1R3G (ENSMMUG00000061878) RPP40 (ENSMMUG00000004966) #11 CDYL (ENSMMUG00000004964) #10 ENSMMUG00000055619 ENSMMUG00000054791 ECI2 (ENSMMUG00000014021) #14 TEX56P (ENSMMUG00000014020) #15 FAM217A (ENSMMUG00000014019) #16 PRPF4B (ENSMMUG00000014017) #17 FAM50B (ENSMMUG00000039209) #18 PXDC1 (ENSMMUG00000010926) #19 SLC22A23 (ENSMMUG00000001371) #20 PSMG4 (ENSMMUG00000011031) #21 TUBB2B (ENSMMUG00000023785) #22 BPHL (ENSMMUG00000008483) #23 RIPK1 (ENSMMUG00000008485) #24 NQO2 (ENSMMUG00000008487) #25 SERPINB6 (ENSMMUG00000037816) ##26 SERPINB9 (ENSMMUG00000011719) #27 SERPINB1 (ENSMMUG00000042368) #28 WRNIP1 (ENSMMUG00000007143) #29 MYLK4 (ENSMMUG00000007144) #30 GMDS (ENSMMUG00000005779) #31 FOXC1 (ENSMMUG00000005778) FOXF2 (ENSMMUG00000004540) FOXQ1 (ENSMMUG00000059043) EXOC2 (ENSMMUG00000023558) IRF4 (ENSMMUG00000018513) DUSP22 (ENSMMUG00000018514) Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #25 ENSGT00910000147563 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Gibbon DUPLICATION Gibbon MODERN SPECIES 23 FARS2 (ENSNLEG00000011479) #8 ENSNLEG00000030412 ENSNLEG00000011472 ENSNLEG00000028872 PPP1R3G (ENSNLEG00000018873) RPP40 (ENSNLEG00000034397) #11 CDYL (ENSNLEG00000011446) #10 ENSNLEG00000031998 ECI2 (ENSNLEG00000011371) #14 ENSNLEG00000011349 #15 ENSNLEG00000011341 #16 PRPF4B (ENSNLEG00000011291) #17 ENSNLEG00000031341 #19 SLC22A23 (ENSNLEG00000011273) #20 ENSNLEG00000011266 #21 TUBB2B (ENSNLEG00000011121) #22 TUBB2A (ENSNLEG00000031860) #22 BPHL (ENSNLEG00000028923) #23 RIPK1 (ENSNLEG00000011075) #24 ENSNLEG00000011073 NQO2 (ENSNLEG00000011051) #25 ENSNLEG00000029196 SERPINB6 (ENSNLEG00000011022) ##26 SERPINB9 (ENSNLEG00000031330) #27 SERPINB1 (ENSNLEG00000010958) #28 WRNIP1 (ENSNLEG00000010928) #29 MYLK4 (ENSNLEG00000010906) #30 ENSNLEG00000035231 GMDS (ENSNLEG00000010832) #31 ENSNLEG00000010830 ENSNLEG00000029356 Gibbon MODERN SPECIES 23 ENSNLEG00000030412 ENSNLEG00000011472 ENSNLEG00000028872 PPP1R3G (ENSNLEG00000018873) RPP40 (ENSNLEG00000034397) #11 CDYL (ENSNLEG00000011446) #10 ENSNLEG00000031998 ECI2 (ENSNLEG00000011371) #14 ENSNLEG00000011349 #15 ENSNLEG00000011341 #16 PRPF4B (ENSNLEG00000011291) #17 ENSNLEG00000031341 #19 SLC22A23 (ENSNLEG00000011273) #20 ENSNLEG00000011266 #21 TUBB2B (ENSNLEG00000011121) #22 TUBB2A (ENSNLEG00000031860) #22 BPHL (ENSNLEG00000028923) #23 RIPK1 (ENSNLEG00000011075) #24 ENSNLEG00000011073 NQO2 (ENSNLEG00000011051) #25 ENSNLEG00000029196 SERPINB6 (ENSNLEG00000011022) ##26 SERPINB9 (ENSNLEG00000031330) #27 SERPINB1 (ENSNLEG00000010958) #28 WRNIP1 (ENSNLEG00000010928) #29 MYLK4 (ENSNLEG00000010906) #30 ENSNLEG00000035231 GMDS (ENSNLEG00000010832) #31 ENSNLEG00000010830 ENSNLEG00000029356 ENSNLEG00000010829 Hominidae ANCESTRAL SPECIES 5 ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00550000076325 ENSGT00530000063480.b.h ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Orangutan MODERN SPECIES 19 ENSPPYG00000039334 ENSPPYG00000030077 PPP1R3G (ENSPPYG00000040553) RPP40 (ENSPPYG00000016194) #11 ENSPPYG00000016193 CDYL (ENSPPYG00000016192) #10 ENSPPYG00000033633 ECI2 (ENSPPYG00000016190) #14 ENSPPYG00000016189 #15 ENSPPYG00000016188 #16 PRPF4B (ENSPPYG00000016187) #17 FAM50B (ENSPPYG00000016184) #18 PXDC1 (ENSPPYG00000041429) #19 SLC22A23 (ENSPPYG00000016182) #20 ENSPPYG00000016181 #21 TUBB2B (ENSPPYG00000016180) #22 BPHL (ENSPPYG00000016179) #23 RIPK1 (ENSPPYG00000016178) #24 NQO2 (ENSPPYG00000016176) #25 SERPINB6 (ENSPPYG00000016174) ##26 SERPINB9 (ENSPPYG00000016173) #27 SERPINB1 (ENSPPYG00000016172) #28 WRNIP1 (ENSPPYG00000041417) #29 MYLK4 (ENSPPYG00000016170) #30 GMDS (ENSPPYG00000016168) #31 FOXC1 (ENSPPYG00000016167) FOXF2 (ENSPPYG00000016166) FOXQ1 (ENSPPYG00000016165) EXOC2 (ENSPPYG00000016162) IRF4 (ENSPPYG00000016161) DUSP22 (ENSPPYG00000016160) Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00550000076325 ENSGT00530000063480.b.h ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Gorilla DUPLICATION Gorilla MODERN SPECIES 19 ENSGGOG00000039934 PPP1R3G (ENSGGOG00000025700) RPP40 (ENSGGOG00000013764) #11 ENSGGOG00000025602 CDYL (ENSGGOG00000022529) #10 ENSGGOG00000024917 ENSGGOG00000042566 ECI2 (ENSGGOG00000006430) #14 ENSGGOG00000023940 #15 ENSGGOG00000034975 #16 PRPF4B (ENSGGOG00000006422) #17 ENSGGOG00000044208 PXDC1 (ENSGGOG00000000462) #19 SLC22A23 (ENSGGOG00000012609) #20 ENSGGOG00000012606 #21 TUBB2B (ENSGGOG00000002310) #22 ENSGGOG00000041508 #22 BPHL (ENSGGOG00000012596) #23 RIPK1 (ENSGGOG00000012589) #24 NQO2 (ENSGGOG00000011077) #25 SERPINB6 (ENSGGOG00000016546) ##26 SERPINB9 (ENSGGOG00000038562) #27 SERPINB1 (ENSGGOG00000007770) #28 WRNIP1 (ENSGGOG00000022046) #29 MYLK4 (ENSGGOG00000004856) #30 GMDS (ENSGGOG00000005663) #31 ENSGGOG00000009269 ENSGGOG00000022142 FOXF2 (ENSGGOG00000013479) ENSGGOG00000038740 HUS1B (ENSGGOG00000007415) Gorilla MODERN SPECIES 19 PPP1R3G (ENSGGOG00000025700) RPP40 (ENSGGOG00000013764) #11 ENSGGOG00000025602 CDYL (ENSGGOG00000022529) #10 ENSGGOG00000024917 ENSGGOG00000042566 ECI2 (ENSGGOG00000006430) #14 ENSGGOG00000023940 #15 ENSGGOG00000034975 #16 PRPF4B (ENSGGOG00000006422) #17 ENSGGOG00000044208 PXDC1 (ENSGGOG00000000462) #19 SLC22A23 (ENSGGOG00000012609) #20 ENSGGOG00000012606 #21 TUBB2B (ENSGGOG00000002310) #22 ENSGGOG00000041508 #22 BPHL (ENSGGOG00000012596) #23 RIPK1 (ENSGGOG00000012589) #24 NQO2 (ENSGGOG00000011077) #25 SERPINB6 (ENSGGOG00000016546) ##26 SERPINB9 (ENSGGOG00000038562) #27 SERPINB1 (ENSGGOG00000007770) #28 WRNIP1 (ENSGGOG00000022046) #29 MYLK4 (ENSGGOG00000004856) #30 GMDS (ENSGGOG00000005663) #31 ENSGGOG00000009269 ENSGGOG00000022142 FOXF2 (ENSGGOG00000013479) ENSGGOG00000038740 HUS1B (ENSGGOG00000007415) EXOC2 (ENSGGOG00000005415) Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000157289.a #9 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106.t #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Pan ANCESTRAL SPECIES 29 ENSGT00940000169445 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106.t #10 ENSGT00550000076325 ENSGT01020000230346.C.c.b.a.b ENSGT00910000147523 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00910000147105 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Bonobo MODERN SPECIES 19 PPP1R3G (ENSPPAG00000010105) RPP40 (ENSPPAG00000023703) #11 ENSPPAG00000042882 CDYL (ENSPPAG00000036996) #10 ENSPPAG00000037535 ENSPPAG00000034861 ECI2 (ENSPPAG00000040308) #14 ENSPPAG00000030290 #15 ENSPPAG00000035868 #16 PRPF4B (ENSPPAG00000040144) #17 ENSPPAG00000036576 PXDC1 (ENSPPAG00000032898) #19 SLC22A23 (ENSPPAG00000033292) #20 ENSPPAG00000035910 #21 ENSPPAG00000035950 TUBB2A (ENSPPAG00000034122) #22 BPHL (ENSPPAG00000035074) #23 RIPK1 (ENSPPAG00000027763) #24 NQO2 (ENSPPAG00000016998) #25 SERPINB6 (ENSPPAG00000043993) ##26 SERPINB9 (ENSPPAG00000034571) #27 SERPINB1 (ENSPPAG00000041181) #28 WRNIP1 (ENSPPAG00000034495) #29 MYLK4 (ENSPPAG00000035250) #30 ENSPPAG00000022392 GMDS (ENSPPAG00000026874) #31 ENSPPAG00000039651 ENSPPAG00000039358 HUS1B (ENSPPAG00000023178) EXOC2 (ENSPPAG00000029339) IRF4 (ENSPPAG00000040992) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 19 PPP1R3G (ENSPTRG00000042254) RPP40 (ENSPTRG00000017690) #11 ENSPTRG00000046429 CDYL (ENSPTRG00000017688) #10 ENSPTRG00000047562 ENSPTRG00000046313 ECI2 (ENSPTRG00000017687) #14 TEX56P (ENSPTRG00000017686) #15 ENSPTRG00000051400 #16 PRPF4B (ENSPTRG00000017683) #17 ENSPTRG00000051344 PXDC1 (ENSPTRG00000017679) #19 SLC22A23 (ENSPTRG00000017678) #20 PSMG4 (ENSPTRG00000033938) #21 ENSPTRG00000050739 #22 ENSPTRG00000048005 #22 ENSPTRG00000044345 #22 BPHL (ENSPTRG00000017673) #23 RIPK1 (ENSPTRG00000017672) #24 ENSPTRG00000048006 NQO2 (ENSPTRG00000017670) #25 SERPINB6 (ENSPTRG00000017669) ##26 SERPINB9 (ENSPTRG00000017668) #27 SERPINB1 (ENSPTRG00000017667) #28 WRNIP1 (ENSPTRG00000017666) #29 MYLK4 (ENSPTRG00000017665) #30 ENSPTRG00000047752 GMDS (ENSPTRG00000017663) #31 FOXC1 (ENSPTRG00000051406) ENSPTRG00000046603 FOXF2 (ENSPTRG00000017662) Chimpanzee MODERN SPECIES 19 ENSPTRG00000045800 PPP1R3G (ENSPTRG00000042254) RPP40 (ENSPTRG00000017690) #11 ENSPTRG00000046429 CDYL (ENSPTRG00000017688) #10 ENSPTRG00000047562 ENSPTRG00000046313 ECI2 (ENSPTRG00000017687) #14 TEX56P (ENSPTRG00000017686) #15 ENSPTRG00000051400 #16 PRPF4B (ENSPTRG00000017683) #17 ENSPTRG00000051344 PXDC1 (ENSPTRG00000017679) #19 SLC22A23 (ENSPTRG00000017678) #20 PSMG4 (ENSPTRG00000033938) #21 ENSPTRG00000050739 #22 ENSPTRG00000048005 #22 ENSPTRG00000044345 #22 BPHL (ENSPTRG00000017673) #23 RIPK1 (ENSPTRG00000017672) #24 ENSPTRG00000048006 NQO2 (ENSPTRG00000017670) #25 SERPINB6 (ENSPTRG00000017669) ##26 SERPINB9 (ENSPTRG00000017668) #27 SERPINB1 (ENSPTRG00000017667) #28 WRNIP1 (ENSPTRG00000017666) #29 MYLK4 (ENSPTRG00000017665) #30 ENSPTRG00000047752 GMDS (ENSPTRG00000017663) #31 FOXC1 (ENSPTRG00000051406) ENSPTRG00000046603 Chimpanzee MODERN SPECIES 19 RPP40 (ENSPTRG00000017690) #11 ENSPTRG00000046429 CDYL (ENSPTRG00000017688) #10 ENSPTRG00000047562 ENSPTRG00000046313 ECI2 (ENSPTRG00000017687) #14 TEX56P (ENSPTRG00000017686) #15 ENSPTRG00000051400 #16 PRPF4B (ENSPTRG00000017683) #17 ENSPTRG00000051344 PXDC1 (ENSPTRG00000017679) #19 SLC22A23 (ENSPTRG00000017678) #20 PSMG4 (ENSPTRG00000033938) #21 ENSPTRG00000050739 #22 ENSPTRG00000048005 #22 ENSPTRG00000044345 #22 BPHL (ENSPTRG00000017673) #23 RIPK1 (ENSPTRG00000017672) #24 ENSPTRG00000048006 NQO2 (ENSPTRG00000017670) #25 SERPINB6 (ENSPTRG00000017669) ##26 SERPINB9 (ENSPTRG00000017668) #27 SERPINB1 (ENSPTRG00000017667) #28 WRNIP1 (ENSPTRG00000017666) #29 MYLK4 (ENSPTRG00000017665) #30 ENSPTRG00000047752 GMDS (ENSPTRG00000017663) #31 FOXC1 (ENSPTRG00000051406) ENSPTRG00000046603 FOXF2 (ENSPTRG00000017662) FOXQ1 (ENSPTRG00000029883) Human DUPLICATION Human MODERN SPECIES 18 LY86 (ENSG00000112799) F13A1 (ENSG00000124491) NRN1 (ENSG00000124785) #7 FARS2 (ENSG00000145982) #8 LYRM4 (ENSG00000214113) #9 PPP1R3G (ENSG00000219607) RPP40 (ENSG00000124787) #11 CDYL (ENSG00000153046) #10 ECI2 (ENSG00000198721) #14 FAM217A (ENSG00000145975) #16 PRPF4B (ENSG00000112739) #17 FAM50B (ENSG00000145945) #18 PXDC1 (ENSG00000168994) #19 SLC22A23 (ENSG00000137266) #20 PSMG4 (ENSG00000180822) #21 TUBB2B (ENSG00000137285) #22 TUBB2A (ENSG00000137267) #22 BPHL (ENSG00000137274) #23 RIPK1 (ENSG00000137275) #24 NQO2 (ENSG00000124588) #25 SERPINB6 (ENSG00000124570) ##26 SERPINB9 (ENSG00000170542) #27 SERPINB1 (ENSG00000021355) #28 WRNIP1 (ENSG00000124535) #29 MYLK4 (ENSG00000145949) #30 GMDS (ENSG00000112699) #31 FOXC1 (ENSG00000054598) FOXF2 (ENSG00000137273) FOXQ1 (ENSG00000164379) HUS1B (ENSG00000188996) EXOC2 (ENSG00000112685) Human MODERN SPECIES 18 F13A1 (ENSG00000124491) NRN1 (ENSG00000124785) #7 FARS2 (ENSG00000145982) #8 LYRM4 (ENSG00000214113) #9 PPP1R3G (ENSG00000219607) RPP40 (ENSG00000124787) #11 CDYL (ENSG00000153046) #10 ECI2 (ENSG00000198721) #14 FAM217A (ENSG00000145975) #16 PRPF4B (ENSG00000112739) #17 FAM50B (ENSG00000145945) #18 PXDC1 (ENSG00000168994) #19 SLC22A23 (ENSG00000137266) #20 PSMG4 (ENSG00000180822) #21 TUBB2B (ENSG00000137285) #22 TUBB2A (ENSG00000137267) #22 BPHL (ENSG00000137274) #23 RIPK1 (ENSG00000137275) #24 NQO2 (ENSG00000124588) #25 SERPINB6 (ENSG00000124570) ##26 SERPINB9 (ENSG00000170542) #27 SERPINB1 (ENSG00000021355) #28 WRNIP1 (ENSG00000124535) #29 MYLK4 (ENSG00000145949) #30 GMDS (ENSG00000112699) #31 FOXC1 (ENSG00000054598) FOXF2 (ENSG00000137273) FOXQ1 (ENSG00000164379) HUS1B (ENSG00000188996) EXOC2 (ENSG00000112685) IRF4 (ENSG00000137265) Platyrrhini ANCESTRAL SPECIES 34 ENSGT00940000158071 #8 ENSGT00940000157289.a.a.b #9 ENSGT00940000157289.a.a.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209.f #19 ENSGT00390000009209.e.a #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746.c.a #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a Cebidae ANCESTRAL SPECIES 33 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a.a.b #9 ENSGT00940000157289.a.a.a #9 ENSGT00940000163747 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209.e.a #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746.c.a #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000154953 ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a Marmoset MODERN SPECIES 16 NRN1 (ENSCJAG00000084548) #7 FARS2 (ENSCJAG00000021369) #8 ENSCJAG00000021370 #9 ENSCJAG00000069228 PPP1R3G (ENSCJAG00000021371) RPP40 (ENSCJAG00000021373) #11 CDYL (ENSCJAG00000021374) #10 ECI2 (ENSCJAG00000021377) #14 ENSCJAG00000040689 #15 FAM217A (ENSCJAG00000021382) #16 PRPF4B (ENSCJAG00000021385) #17 FAM50B (ENSCJAG00000017601) #18 PXDC1 (ENSCJAG00000017603) #19 SLC22A23 (ENSCJAG00000017606) #20 ENSCJAG00000017623 #21 TUBB2B (ENSCJAG00000045954) #22 ENSCJAG00000017700 #23 RIPK1 (ENSCJAG00000017707) #24 NQO2 (ENSCJAG00000017717) #25 ENSCJAG00000070954 ENSCJAG00000086827 ENSCJAG00000073772 ENSCJAG00000052093 ENSCJAG00000085203 ENSCJAG00000070049 ENSCJAG00000066289 ENSCJAG00000072237 ENSCJAG00000032252 ENSCJAG00000074016 ENSCJAG00000010562 ##26 SERPINB9 (ENSCJAG00000042376) #27 Cebidae_a ANCESTRAL SPECIES 42 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a.a.b #9 ENSGT00910000146968 ENSGT00390000014167 #11 ENSGT00940000155106 #10 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209.e.a #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746.c.a #23 ENSGT00940000159347 #24 ENSGT00390000006707.w.b ENSGT00940000156563 #25 ENSGT00940000154519.g.b ##26 ENSGT00940000154931 #27 ENSGT00940000154573 #28 ENSGT00390000008538 #29 ENSGT00940000156211.b #30 ENSGT00440000033640 #31 ENSGT00940000154953 ENSGT00940000162527 ENSGT00390000010872 ENSGT00390000001231.s.a.d ENSGT00940000159059 Bolivian squirrel monkey MODERN SPECIES 64 NRN1 (ENSSBOG00000016661) #7 FARS2 (ENSSBOG00000025432) #8 ENSSBOG00000033795 #9 ENSSBOG00000029411 RPP40 (ENSSBOG00000020297) #11 CDYL (ENSSBOG00000034197) #10 ECI2 (ENSSBOG00000021463) #14 ENSSBOG00000022307 #15 FAM217A (ENSSBOG00000029826) #16 PRPF4B (ENSSBOG00000014617) #17 ENSSBOG00000013265 FAM50B (ENSSBOG00000036113) #18 PXDC1 (ENSSBOG00000000499) #19 SLC22A23 (ENSSBOG00000026574) #20 ENSSBOG00000033676 TUBB2A (ENSSBOG00000023452) #22 ENSSBOG00000032695 #23 RIPK1 (ENSSBOG00000029217) #24 NQO2 (ENSSBOG00000028797) #25 SERPINB6 (ENSSBOG00000019279) ##26 SERPINB9 (ENSSBOG00000028507) #27 SERPINB1 (ENSSBOG00000024614) #28 WRNIP1 (ENSSBOG00000025057) #29 MYLK4 (ENSSBOG00000026264) #30 GMDS (ENSSBOG00000023900) #31 FOXF2 (ENSSBOG00000030093) EXOC2 (ENSSBOG00000023371) IRF4 (ENSSBOG00000034798) ENSSBOG00000024591 DUSP22 (ENSSBOG00000033220) ENSSBOG00000022277 Capuchin DUPLICATION Capuchin MODERN SPECIES 231 ENSCCAG00000017866 ENSCCAG00000018328 GTF3C6 (ENSCCAG00000029714) RPF2 (ENSCCAG00000030864) ENSCCAG00000037609 SLC16A10 (ENSCCAG00000020583) ENSCCAG00000005460 MFSD4B (ENSCCAG00000027584) ENSCCAG00000024842 ENSCCAG00000027786 #15 FAM217A (ENSCCAG00000014228) #16 PRPF4B (ENSCCAG00000001770) #17 PXDC1 (ENSCCAG00000029262) #19 SLC22A23 (ENSCCAG00000019171) #20 PSMG4 (ENSCCAG00000025375) #21 TUBB2B (ENSCCAG00000003095) #22 ENSCCAG00000032435 #22 ENSCCAG00000024163 #23 RIPK1 (ENSCCAG00000030822) #24 ENSCCAG00000036205 NQO2 (ENSCCAG00000032987) #25 SERPINB6 (ENSCCAG00000034114) ##26 SERPINB9 (ENSCCAG00000037402) #27 SERPINB1 (ENSCCAG00000037553) #28 WRNIP1 (ENSCCAG00000030869) #29 MYLK4 (ENSCCAG00000023264) #30 GMDS (ENSCCAG00000021064) #31 ENSCCAG00000034696 FOXF2 (ENSCCAG00000033175) Capuchin MODERN SPECIES 231 ENSCCAG00000018328 GTF3C6 (ENSCCAG00000029714) RPF2 (ENSCCAG00000030864) ENSCCAG00000037609 SLC16A10 (ENSCCAG00000020583) ENSCCAG00000005460 MFSD4B (ENSCCAG00000027584) ENSCCAG00000024842 ENSCCAG00000027786 #15 FAM217A (ENSCCAG00000014228) #16 PRPF4B (ENSCCAG00000001770) #17 PXDC1 (ENSCCAG00000029262) #19 SLC22A23 (ENSCCAG00000019171) #20 PSMG4 (ENSCCAG00000025375) #21 TUBB2B (ENSCCAG00000003095) #22 ENSCCAG00000032435 #22 ENSCCAG00000024163 #23 RIPK1 (ENSCCAG00000030822) #24 ENSCCAG00000036205 NQO2 (ENSCCAG00000032987) #25 SERPINB6 (ENSCCAG00000034114) ##26 SERPINB9 (ENSCCAG00000037402) #27 SERPINB1 (ENSCCAG00000037553) #28 WRNIP1 (ENSCCAG00000030869) #29 MYLK4 (ENSCCAG00000023264) #30 GMDS (ENSCCAG00000021064) #31 ENSCCAG00000034696 FOXF2 (ENSCCAG00000033175) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 638 F13A1 (ENSANAG00000035239) NRN1 (ENSANAG00000026127) #7 FARS2 (ENSANAG00000019047) #8 ENSANAG00000033127 LYRM4 (ENSANAG00000024664) #9 RPP40 (ENSANAG00000029246) #11 CDYL (ENSANAG00000023827) #10 ECI2 (ENSANAG00000028772) #14 ENSANAG00000030717 #15 FAM217A (ENSANAG00000004744) #16 PRPF4B (ENSANAG00000021606) #17 FAM50B (ENSANAG00000031334) #18 ENSANAG00000021015 #19 SLC22A23 (ENSANAG00000023717) #20 PSMG4 (ENSANAG00000032191) #21 TUBB2B (ENSANAG00000036086) #22 TUBB2A (ENSANAG00000030561) #22 ENSANAG00000020303 #23 RIPK1 (ENSANAG00000033311) #24 ENSANAG00000007502 NQO2 (ENSANAG00000033860) #25 Mas night monkey MODERN SPECIES 638 NRN1 (ENSANAG00000026127) #7 FARS2 (ENSANAG00000019047) #8 ENSANAG00000033127 LYRM4 (ENSANAG00000024664) #9 RPP40 (ENSANAG00000029246) #11 CDYL (ENSANAG00000023827) #10 ECI2 (ENSANAG00000028772) #14 ENSANAG00000030717 #15 FAM217A (ENSANAG00000004744) #16 PRPF4B (ENSANAG00000021606) #17 FAM50B (ENSANAG00000031334) #18 ENSANAG00000021015 #19 SLC22A23 (ENSANAG00000023717) #20 PSMG4 (ENSANAG00000032191) #21 TUBB2B (ENSANAG00000036086) #22 TUBB2A (ENSANAG00000030561) #22 ENSANAG00000020303 #23 RIPK1 (ENSANAG00000033311) #24 ENSANAG00000007502 NQO2 (ENSANAG00000033860) #25 Tarsier DUPLICATION Tarsier MODERN SPECIES 6444 PXDC1 (ENSTSYG00000027082) #19 SLC22A23 (ENSTSYG00000000070) #20 PSMG4 (ENSTSYG00000035888) #21 TUBB2B (ENSTSYG00000037166) #22 TUBB2A (ENSTSYG00000012371) #22 BPHL (ENSTSYG00000011270) #23 RIPK1 (ENSTSYG00000011192) #24 NQO2 (ENSTSYG00000003832) #25 SERPINB6 (ENSTSYG00000035626) ##26 SERPINB9 (ENSTSYG00000003659) #27 Tarsier MODERN SPECIES 6444 PXDC1 (ENSTSYG00000027082) #19 SLC22A23 (ENSTSYG00000000070) #20 PSMG4 (ENSTSYG00000035888) #21 TUBB2B (ENSTSYG00000037166) #22 TUBB2A (ENSTSYG00000012371) #22 BPHL (ENSTSYG00000011270) #23 RIPK1 (ENSTSYG00000011192) #24 NQO2 (ENSTSYG00000003832) #25 SERPINB6 (ENSTSYG00000035626) ##26 SERPINB9 (ENSTSYG00000003659) #27