Muroidea	ANCESTRAL SPECIES	15	ENSGT01050000244939.a.a.a	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105 #13	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00940000175246	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b #27	ENSGT00940000154931.d #31	ENSGT00940000154573 #35	ENSGT00390000008538 #36	ENSGT01000000215059	ENSGT00940000156211.b	ENSGT00440000033640	ENSGT00940000162303.b	ENSGT00940000162527	ENSGT00940000162937.b	ENSGT00390000010872
Muroidea_A	ANCESTRAL SPECIES	14	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q #13	ENSGT00940000155105.r #14	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00940000175246	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.b ##27	ENSGT00940000154519.g.b.a #27	ENSGT00940000154931.d #31	ENSGT00940000154573 #35	ENSGT01000000215059	ENSGT00390000008538 #36	ENSGT00940000156211.b	ENSGT00440000033640	ENSGT00940000162303.b	ENSGT00940000162527	ENSGT00940000162937.b
Cricetidae	ANCESTRAL SPECIES	22	ENSGT00390000018605	ENSGT01050000244939.a.a.a	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q #13	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00940000175246	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.a.c.a #27	ENSGT00940000154519.g.b.a.d ##27	ENSGT00940000154519.g.b.a.c.b #33	ENSGT00940000154931.d #31	ENSGT00940000154573 #35	ENSGT01000000215059	ENSGT00390000008538 #36	ENSGT00940000156211.b	ENSGT00440000033640	ENSGT00940000162303.b	ENSGT00940000162527
Cricetidae_B	ANCESTRAL SPECIES	22	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q #13	ENSGT00940000155105.r #14	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00940000175246	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.a.c.a #27	ENSGT00940000154519.g.b.a.d ##27	ENSGT00940000154931.d #31	ENSGT00940000154573 #35	ENSGT01000000215059	ENSGT00390000008538 #36	ENSGT00940000156211.b	ENSGT00440000033640	ENSGT00940000162303.b	ENSGT00940000162527	ENSGT00940000162937.b
Prairie vole	DUPLICATION
Prairie vole	MODERN SPECIES	3	Nrn1 (ENSMOCG00000015236) #7	Fars2 (ENSMOCG00000021203) #8	Lyrm4 (ENSMOCG00000015484) #9	Ppp1r3g (ENSMOCG00000005122) #10	Rpp40 (ENSMOCG00000000305) #11	Cdyl (ENSMOCG00000012115) #12	ENSMOCG00000009658 #13	ENSMOCG00000006528 #14	Tex56 (ENSMOCG00000011556) #15	Fam217a (ENSMOCG00000021508) #16	Prpf4b (ENSMOCG00000022394) #17	Fam50b (ENSMOCG00000009994) #18	Pxdc1 (ENSMOCG00000020484) #19	Slc22a23 (ENSMOCG00000009539) #20	Psmg4 (ENSMOCG00000020506) #21	Tubb2b (ENSMOCG00000021829) #22	Tubb2a (ENSMOCG00000021775) #23	Bphl (ENSMOCG00000012434) #24	Ripk1 (ENSMOCG00000002677) #25	Nqo2 (ENSMOCG00000007454) #26	ENSMOCG00000000484 #27	ENSMOCG00000016676 #28	ENSMOCG00000019022 #29	ENSMOCG00000011182 #30	ENSMOCG00000004352 #31	ENSMOCG00000010614 #32	ENSMOCG00000016281 #33	ENSMOCG00000000987 #34	ENSMOCG00000021377 #35	Wrnip1 (ENSMOCG00000002819) #36	ENSMOCG00000019965 #37
Prairie vole	MODERN SPECIES	3	Fars2 (ENSMOCG00000021203) #8	Lyrm4 (ENSMOCG00000015484) #9	Ppp1r3g (ENSMOCG00000005122) #10	Rpp40 (ENSMOCG00000000305) #11	Cdyl (ENSMOCG00000012115) #12	ENSMOCG00000009658 #13	ENSMOCG00000006528 #14	Tex56 (ENSMOCG00000011556) #15	Fam217a (ENSMOCG00000021508) #16	Prpf4b (ENSMOCG00000022394) #17	Fam50b (ENSMOCG00000009994) #18	Pxdc1 (ENSMOCG00000020484) #19	Slc22a23 (ENSMOCG00000009539) #20	Psmg4 (ENSMOCG00000020506) #21	Tubb2b (ENSMOCG00000021829) #22	Tubb2a (ENSMOCG00000021775) #23	Bphl (ENSMOCG00000012434) #24	Ripk1 (ENSMOCG00000002677) #25	Nqo2 (ENSMOCG00000007454) #26	ENSMOCG00000000484 #27	ENSMOCG00000016676 #28	ENSMOCG00000019022 #29	ENSMOCG00000011182 #30	ENSMOCG00000004352 #31	ENSMOCG00000010614 #32	ENSMOCG00000016281 #33	ENSMOCG00000000987 #34	ENSMOCG00000021377 #35	Wrnip1 (ENSMOCG00000002819) #36	ENSMOCG00000019965 #37	Mylk4 (ENSMOCG00000014428)
Northern American deer mouse	MODERN SPECIES	18	Fars2 (ENSPEMG00000017477) #8	Lyrm4 (ENSPEMG00000030913) #9	Ppp1r3g (ENSPEMG00000014441) #10	Rpp40 (ENSPEMG00000020809) #11	Cdyl (ENSPEMG00000022690) #12	ENSPEMG00000021110 #13	ENSPEMG00000021161 #14	Tex56 (ENSPEMG00000020583) #15	Fam217a (ENSPEMG00000020354) #16	Prpf4b (ENSPEMG00000020358) #17	ENSPEMG00000031049	Fam50b (ENSPEMG00000024324) #18	Pxdc1 (ENSPEMG00000021893) #19	Slc22a23 (ENSPEMG00000020810) #20	Psmg4 (ENSPEMG00000020434) #21	Tubb2b (ENSPEMG00000008538) #22	ENSPEMG00000028800	Bphl (ENSPEMG00000020657) #24	Ripk1 (ENSPEMG00000014892) #25	Nqo2 (ENSPEMG00000022103) #26	ENSPEMG00000030940 ##27	ENSPEMG00000006842 ##27	ENSPEMG00000011189 #31	ENSPEMG00000029739 ##27	ENSPEMG00000025946 #31	ENSPEMG00000007216 #31	ENSPEMG00000007226 ##27	ENSPEMG00000024282 #31	ENSPEMG00000003771 #35	ENSPEMG00000030799	Wrnip1 (ENSPEMG00000000543) #36
Cricetinae	ANCESTRAL SPECIES	20	ENSGT00390000018605	ENSGT01050000244939.a.a.a	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q #13	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.a.c.a #27	ENSGT00940000154931.d.i #31	ENSGT00940000154519.g.b.a.c.b #33	ENSGT00940000154931.d.j #31	ENSGT00940000154573 #35	ENSGT01000000215059	ENSGT00390000008538 #36	ENSGT00940000156211.b	ENSGT00440000033640	ENSGT00940000162303.b	ENSGT00940000162527	ENSGT00940000162937.b
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	623	Fars2 (ENSMAUG00000008493) #8	Lyrm4 (ENSMAUG00000009051) #9	Rpp40 (ENSMAUG00000010268) #11	Cdyl (ENSMAUG00000011510) #12	ENSMAUG00000020164 #13	ENSMAUG00000001515 #14	Tex56 (ENSMAUG00000002707) #15	Fam217a (ENSMAUG00000004346) #16	Prpf4b (ENSMAUG00000007805) #17	ENSMAUG00000015060	Fam50b (ENSMAUG00000001407) #18	Pxdc1 (ENSMAUG00000016900) #19	Slc22a23 (ENSMAUG00000017453) #20	Psmg4 (ENSMAUG00000017755) #21	ENSMAUG00000018054 #22	Tubb2a (ENSMAUG00000018540) #22	Bphl (ENSMAUG00000000408) #24	Ripk1 (ENSMAUG00000000557) #25	Nqo2 (ENSMAUG00000000875) #26	ENSMAUG00000001093 #27	ENSMAUG00000001439 #31	ENSMAUG00000008075 #31	ENSMAUG00000009098 #33	ENSMAUG00000009345 #31	ENSMAUG00000009659 #35	Wrnip1 (ENSMAUG00000009914) #36	Mylk4 (ENSMAUG00000011053)	Gmds (ENSMAUG00000011976)	Foxc1 (ENSMAUG00000018460)	Foxf2 (ENSMAUG00000012470)	Foxq1 (ENSMAUG00000018519)
Golden Hamster	MODERN SPECIES	623	Nrn1 (ENSMAUG00000008121) #7	Fars2 (ENSMAUG00000008493) #8	Lyrm4 (ENSMAUG00000009051) #9	Rpp40 (ENSMAUG00000010268) #11	Cdyl (ENSMAUG00000011510) #12	ENSMAUG00000020164 #13	ENSMAUG00000001515 #14	Tex56 (ENSMAUG00000002707) #15	Fam217a (ENSMAUG00000004346) #16	Prpf4b (ENSMAUG00000007805) #17	ENSMAUG00000015060	Fam50b (ENSMAUG00000001407) #18	Pxdc1 (ENSMAUG00000016900) #19	Slc22a23 (ENSMAUG00000017453) #20	Psmg4 (ENSMAUG00000017755) #21	ENSMAUG00000018054 #22	Tubb2a (ENSMAUG00000018540) #22	Bphl (ENSMAUG00000000408) #24	Ripk1 (ENSMAUG00000000557) #25	Nqo2 (ENSMAUG00000000875) #26	ENSMAUG00000001093 #27	ENSMAUG00000001439 #31	ENSMAUG00000008075 #31	ENSMAUG00000009098 #33	ENSMAUG00000009345 #31	ENSMAUG00000009659 #35	Wrnip1 (ENSMAUG00000009914) #36	Mylk4 (ENSMAUG00000011053)	Gmds (ENSMAUG00000011976)	Foxc1 (ENSMAUG00000018460)	Foxf2 (ENSMAUG00000012470)
Chinese hamster chok1gshd	DUPLICATION
Chinese hamster chok1gshd	MODERN SPECIES	317	Nrn1 (ENSCGRG00001017665) #7	ENSCGRG00001012890	Fars2 (ENSCGRG00001022626) #8	Lyrm4 (ENSCGRG00001020406) #9	Ppp1r3g (ENSCGRG00001001814) #10	Rpp40 (ENSCGRG00001018328) #11	ENSCGRG00001013878	Cdyl (ENSCGRG00001002703) #12	ENSCGRG00001021795 #13	Fam217a (ENSCGRG00001020164) #16	Prpf4b (ENSCGRG00001019388) #17	Fam50b (ENSCGRG00001009274) #18	Pxdc1 (ENSCGRG00001021838) #19	Slc22a23 (ENSCGRG00001010789) #20	Psmg4 (ENSCGRG00001017753) #21	Tubb2b (ENSCGRG00001008382) #22	Tubb2a (ENSCGRG00001020515) #22	Bphl (ENSCGRG00001014124) #24	Ripk1 (ENSCGRG00001014419) #25	Nqo2 (ENSCGRG00001004425) #26	ENSCGRG00001015437 #27	ENSCGRG00001020665 #27	ENSCGRG00001022043 #31	ENSCGRG00001021359	ENSCGRG00001014514 #31	ENSCGRG00001009851	ENSCGRG00001000139 #35	ENSCGRG00001007544	Wrnip1 (ENSCGRG00001020075) #36	Mylk4 (ENSCGRG00001012998)	ENSCGRG00001020761
Chinese hamster chok1gshd	MODERN SPECIES	317	ENSCGRG00001012890	Fars2 (ENSCGRG00001022626) #8	Lyrm4 (ENSCGRG00001020406) #9	Ppp1r3g (ENSCGRG00001001814) #10	Rpp40 (ENSCGRG00001018328) #11	ENSCGRG00001013878	Cdyl (ENSCGRG00001002703) #12	ENSCGRG00001021795 #13	Fam217a (ENSCGRG00001020164) #16	Prpf4b (ENSCGRG00001019388) #17	Fam50b (ENSCGRG00001009274) #18	Pxdc1 (ENSCGRG00001021838) #19	Slc22a23 (ENSCGRG00001010789) #20	Psmg4 (ENSCGRG00001017753) #21	Tubb2b (ENSCGRG00001008382) #22	Tubb2a (ENSCGRG00001020515) #22	Bphl (ENSCGRG00001014124) #24	Ripk1 (ENSCGRG00001014419) #25	Nqo2 (ENSCGRG00001004425) #26	ENSCGRG00001015437 #27	ENSCGRG00001020665 #27	ENSCGRG00001022043 #31	ENSCGRG00001021359	ENSCGRG00001014514 #31	ENSCGRG00001009851	ENSCGRG00001000139 #35	ENSCGRG00001007544	Wrnip1 (ENSCGRG00001020075) #36	Mylk4 (ENSCGRG00001012998)	ENSCGRG00001020761	Gmds (ENSCGRG00001014163)
Murinae	ANCESTRAL SPECIES	21	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q #13	ENSGT00940000155105.r #14	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.b ##27	ENSGT00940000154573.k.b #35	ENSGT00940000154931.d.o.a.b #31	ENSGT00940000154931.d.o.a.a #31	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154573.l #35	ENSGT00940000154573.k.a #35	ENSGT01000000215059	ENSGT00390000008538 #36	ENSGT00940000156211.b	ENSGT00440000033640	ENSGT00940000162303.b
Rat	DUPLICATION
Rat	MODERN SPECIES	8	Fars2 (ENSRNOG00000016135) #8	Lyrm4 (ENSRNOG00000047970) #9	Ppp1r3g (ENSRNOG00000016222) #10	Rpp40 (ENSRNOG00000016226) #11	Cdyl (ENSRNOG00000032215) #12	Eci2 (ENSRNOG00000066714) #13	Eci3 (ENSRNOG00000029549) #14	Tex56p (ENSRNOG00000033763) #15	Fam217a (ENSRNOG00000016672) #16	Prpf4b (ENSRNOG00000016705) #17	Fam50b (ENSRNOG00000017083) #18	Pxdc1 (ENSRNOG00000017093) #19	Slc22a23 (ENSRNOG00000017210) #20	Psmg4 (ENSRNOG00000039265) #21	Tubb2a (ENSRNOG00000017558) #22	Tubb2b (ENSRNOG00000017445) #22	Bphl (ENSRNOG00000017577) #24	Ripk1 (ENSRNOG00000017787) #25	Serpinb6a (ENSRNOG00000017962) ##27	Nqo2 (ENSRNOG00000017820) #26	RGD1564786 (ENSRNOG00000063990) #27	Serpinb6e (ENSRNOG00000070025) #27	Serpinb9d (ENSRNOG00000022139) #31	Serpinb1b (ENSRNOG00000034229) #35	RGD1562844 (ENSRNOG00000048576) #31	Serpinb9 (ENSRNOG00000033772) #31	Serpinb6b (ENSRNOG00000016420) #27	Serpinb1a (ENSRNOG00000016581) #35	Wrnip1 (ENSRNOG00000017040) #36	ENSRNOG00000063699	Mylk4 (ENSRNOG00000070083)
Rat	MODERN SPECIES	8	Nrn1 (ENSRNOG00000050767) #7	Fars2 (ENSRNOG00000016135) #8	Lyrm4 (ENSRNOG00000047970) #9	Ppp1r3g (ENSRNOG00000016222) #10	Rpp40 (ENSRNOG00000016226) #11	Cdyl (ENSRNOG00000032215) #12	Eci2 (ENSRNOG00000066714) #13	Eci3 (ENSRNOG00000029549) #14	Tex56p (ENSRNOG00000033763) #15	Fam217a (ENSRNOG00000016672) #16	Prpf4b (ENSRNOG00000016705) #17	Fam50b (ENSRNOG00000017083) #18	Pxdc1 (ENSRNOG00000017093) #19	Slc22a23 (ENSRNOG00000017210) #20	Psmg4 (ENSRNOG00000039265) #21	Tubb2a (ENSRNOG00000017558) #22	Tubb2b (ENSRNOG00000017445) #22	Bphl (ENSRNOG00000017577) #24	Ripk1 (ENSRNOG00000017787) #25	Serpinb6a (ENSRNOG00000017962) ##27	Nqo2 (ENSRNOG00000017820) #26	RGD1564786 (ENSRNOG00000063990) #27	Serpinb6e (ENSRNOG00000070025) #27	Serpinb9d (ENSRNOG00000022139) #31	Serpinb1b (ENSRNOG00000034229) #35	RGD1562844 (ENSRNOG00000048576) #31	Serpinb9 (ENSRNOG00000033772) #31	Serpinb6b (ENSRNOG00000016420) #27	Serpinb1a (ENSRNOG00000016581) #35	Wrnip1 (ENSRNOG00000017040) #36	ENSRNOG00000063699
Mus	ANCESTRAL SPECIES	18	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q.a #13	ENSGT00940000155105.q.b #13	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.b ##27	ENSGT00940000154519.g.b.a.a.a.a #27	ENSGT00940000154519.g.b.a.a.b.a #27	ENSGT00940000154519.g.b.a.a.a.b.a #27	ENSGT00940000154931.d.o.b #31	ENSGT00940000154931.d.p #31	ENSGT00940000154931.d.o.a.a #31	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154931.d.o.a.b #31	ENSGT00940000154573.k.b #35	ENSGT00940000154573.k.a #35	ENSGT01000000215059
Mus_A	ANCESTRAL SPECIES	14	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q.a #13	ENSGT00940000155105.q.b #13	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.b ##27	ENSGT00940000154519.g.b.a.a.a.a #27	ENSGT00940000154519.g.a ##27	ENSGT00940000154931.d.o.a.a #31	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154573.l #35	ENSGT00940000154931.d.o.a.b #31	ENSGT00940000154573.k.b #35	ENSGT00940000154573.k.a #35	ENSGT01000000215059	ENSGT00390000008538 #36	ENSGT00940000156211.b
Ryukyu mouse	MODERN SPECIES	4	Nrn1 (MGP_CAROLIEiJ_G0018433) #7	Fars2 (MGP_CAROLIEiJ_G0018432) #8	Lyrm4 (MGP_CAROLIEiJ_G0018431) #9	Ppp1r3g (MGP_CAROLIEiJ_G0018430) #10	Rpp40 (MGP_CAROLIEiJ_G0018429) #11	Cdyl (MGP_CAROLIEiJ_G0018428) #12	Eci2 (MGP_CAROLIEiJ_G0018427) #13	Eci3 (MGP_CAROLIEiJ_G0018426) #13	Tex56 (MGP_CAROLIEiJ_G0018425) #15	MGP_CAROLIEiJ_G0018424 #16	Prpf4b (MGP_CAROLIEiJ_G0018423) #17	Fam50b (MGP_CAROLIEiJ_G0018422) #18	Pxdc1 (MGP_CAROLIEiJ_G0018421) #19	Slc22a23 (MGP_CAROLIEiJ_G0018420) #20	Psmg4 (MGP_CAROLIEiJ_G0018419) #21	MGP_CAROLIEiJ_G0018418 #22	Bphl (MGP_CAROLIEiJ_G0018417) #24	Ripk1 (MGP_CAROLIEiJ_G0018416) #25	Nqo2 (MGP_CAROLIEiJ_G0018415) #26	Serpinb6a (MGP_CAROLIEiJ_G0018414) ##27	Serpinb6c (MGP_CAROLIEiJ_G0018413) #27	MGP_CAROLIEiJ_G0018412 ##27	MGP_CAROLIEiJ_G0018411 #31	MGP_CAROLIEiJ_G0018410 #31	MGP_CAROLIEiJ_G0018409 #31	Serpinb9 (MGP_CAROLIEiJ_G0018408) #31	Serpinb6b (MGP_CAROLIEiJ_G0018407) #27	MGP_CAROLIEiJ_G0018406 #35	Serpinb1a (MGP_CAROLIEiJ_G0018405) #35	MGP_CAROLIEiJ_G0018404	Wrnip1 (MGP_CAROLIEiJ_G0018403) #36
Mus_B	ANCESTRAL SPECIES	13	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q.a #13	ENSGT00940000155105.q.b #13	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.b ##27	ENSGT00940000154519.g.b.a.a.a.a #27	ENSGT00940000154519.g.b.a.a.b.a #27	ENSGT00940000154519.g.b.a.a.a.b.a #27	ENSGT00940000154931.d.o.b.a.a #31	ENSGT00940000154931.d.o.b.b #31	ENSGT00940000154931.d.p #31	ENSGT00940000154573.k.b #35	ENSGT00940000154931.d.o.a.b #31	ENSGT00940000154931.d.o.a.a #31	ENSGT00940000154519.g.b.a.b #27	ENSGT00940000154573.l #35
Mouse	DUPLICATION
Mouse	MODERN SPECIES	4	Nrn1 (ENSMUSG00000039114) #7	Fars2 (ENSMUSG00000021420) #8	Lyrm4 (ENSMUSG00000046573) #9	Ppp1r3g (ENSMUSG00000050423) #10	Rpp40 (ENSMUSG00000021418) #11	Cdyl (ENSMUSG00000059288) #12	Eci2 (ENSMUSG00000021417) #13	Eci3 (ENSMUSG00000021416) #13	Tex56 (ENSMUSG00000021415) #15	Fam217a (ENSMUSG00000021414) #16	Prpf4b (ENSMUSG00000021413) #17	Fam50b (ENSMUSG00000038246) #18	Pxdc1 (ENSMUSG00000021411) #19	Slc22a23 (ENSMUSG00000038267) #20	Psmg4 (ENSMUSG00000071451) #21	Tubb2b (ENSMUSG00000045136) #22	Tubb2a (ENSMUSG00000058672) #22	Bphl (ENSMUSG00000038286) #24	Ripk1 (ENSMUSG00000021408) #25	Nqo2 (ENSMUSG00000046949) #26	Serpinb6a (ENSMUSG00000060147) ##27	Serpinb6c (ENSMUSG00000052180) #27	Serpinb6e (ENSMUSG00000069248) #27	Serpinb6d (ENSMUSG00000047889) #27	Serpinb9g (ENSMUSG00000057726) #31	Serpinb9h (ENSMUSG00000071452) #31	Serpinb9f (ENSMUSG00000038327) #31	Serpinb9e (ENSMUSG00000062342) #31	Serpinb9d (ENSMUSG00000054266) #31	Serpinb9c (ENSMUSG00000021404) #31	Serpinb1b (ENSMUSG00000051029) #35
Mouse	MODERN SPECIES	4	Fars2 (ENSMUSG00000021420) #8	Lyrm4 (ENSMUSG00000046573) #9	Ppp1r3g (ENSMUSG00000050423) #10	Rpp40 (ENSMUSG00000021418) #11	Cdyl (ENSMUSG00000059288) #12	Eci2 (ENSMUSG00000021417) #13	Eci3 (ENSMUSG00000021416) #13	Tex56 (ENSMUSG00000021415) #15	Fam217a (ENSMUSG00000021414) #16	Prpf4b (ENSMUSG00000021413) #17	Fam50b (ENSMUSG00000038246) #18	Pxdc1 (ENSMUSG00000021411) #19	Slc22a23 (ENSMUSG00000038267) #20	Psmg4 (ENSMUSG00000071451) #21	Tubb2b (ENSMUSG00000045136) #22	Tubb2a (ENSMUSG00000058672) #22	Bphl (ENSMUSG00000038286) #24	Ripk1 (ENSMUSG00000021408) #25	Nqo2 (ENSMUSG00000046949) #26	Serpinb6a (ENSMUSG00000060147) ##27	Serpinb6c (ENSMUSG00000052180) #27	Serpinb6e (ENSMUSG00000069248) #27	Serpinb6d (ENSMUSG00000047889) #27	Serpinb9g (ENSMUSG00000057726) #31	Serpinb9h (ENSMUSG00000071452) #31	Serpinb9f (ENSMUSG00000038327) #31	Serpinb9e (ENSMUSG00000062342) #31	Serpinb9d (ENSMUSG00000054266) #31	Serpinb9c (ENSMUSG00000021404) #31	Serpinb1b (ENSMUSG00000051029) #35	Serpinb9b (ENSMUSG00000021403) #31
Mus_C	ANCESTRAL SPECIES	10	ENSGT00530000063853.a.a.b #7	ENSGT00940000158071 #8	ENSGT00940000157289.a #9	ENSGT00940000163747 #10	ENSGT00390000014167 #11	ENSGT00940000155106 #12	ENSGT00940000155105.q.a #13	ENSGT00940000155105.q.b #13	ENSGT00390000008360 #15	ENSGT00940000154543.b #16	ENSGT00940000155562 #17	ENSGT00390000004735.B #18	ENSGT00390000009209 #19	ENSGT00940000157354 #20	ENSGT00390000011804 #21	ENSGT00940000154150 #22	ENSGT00390000004746 #24	ENSGT00940000159347 #25	ENSGT00940000156563 #26	ENSGT00940000154519.g.b.b ##27	ENSGT00940000154519.g.b.a.a.a.a #27	ENSGT00940000154519.g.b.a.a.b.a #27	ENSGT00940000154519.g.b.a.a.a.b.a #27	ENSGT00940000154931.d.o.b.a.a #31	ENSGT00940000154931.d.o.b.a.b #31	ENSGT00940000154931.d.o.b.b #31	ENSGT00940000154931.d.p #31	ENSGT00940000154573.k.b #35	ENSGT00940000154931.d.o.a.b #31	ENSGT00940000154931.d.o.a.a #31	ENSGT00940000154519.g.b.a.b #27
Steppe mouse	DUPLICATION
Steppe mouse	MODERN SPECIES	2870															Btbd3 (ENSMSIG00000003269)	ENSMSIG00000003305 #22	ENSMSIG00000003421
Steppe mouse	MODERN SPECIES	2975							ENSMSIG00000002713 #13	Tex56 (ENSMSIG00000002912) #15	Fam217a (ENSMSIG00000002942) #16	Prpf4b (ENSMSIG00000003035) #17	ENSMSIG00000003077	Fam50b (ENSMSIG00000003082) #18	Pxdc1 (ENSMSIG00000003089) #19	Slc22a23 (ENSMSIG00000003104) #20	Psmg4 (ENSMSIG00000003186) #21	Tubb2a (ENSMSIG00000003218) #22	Bphl (ENSMSIG00000003262) #24	Ripk1 (ENSMSIG00000003307) #25	Nqo2 (ENSMSIG00000003346) #26	Serpinb6a (ENSMSIG00000003400) ##27	Serpinb6c (ENSMSIG00000003508) #27	Serpinb6e (ENSMSIG00000003547) #27	Serpinb6d (ENSMSIG00000003590) #27
spretus	DUPLICATION
spretus	DUPLICATION
spretus	MODERN SPECIES	4	MGP_SPRETEiJ_G0019307	MGP_SPRETEiJ_G0019306	MGP_SPRETEiJ_G0019305	MGP_SPRETEiJ_G0019304	MGP_SPRETEiJ_G0019303 #13	MGP_SPRETEiJ_G0019302 #13	Tex56 (MGP_SPRETEiJ_G0019301) #15	MGP_SPRETEiJ_G0019300 #16	Prpf4b (MGP_SPRETEiJ_G0019299) #17	Fam50b (MGP_SPRETEiJ_G0019298) #18	Pxdc1 (MGP_SPRETEiJ_G0019297) #19	Slc22a23 (MGP_SPRETEiJ_G0019296) #20	Psmg4 (MGP_SPRETEiJ_G0019295) #21	MGP_SPRETEiJ_G0019294 #22	MGP_SPRETEiJ_G0019293 #22	MGP_SPRETEiJ_G0019292 #22	Bphl (MGP_SPRETEiJ_G0019291) #24	Ripk1 (MGP_SPRETEiJ_G0019290) #25	Nqo2 (MGP_SPRETEiJ_G0019289) #26	Serpinb6a (MGP_SPRETEiJ_G0019288) ##27	Serpinb6c (MGP_SPRETEiJ_G0019287) #27	MGP_SPRETEiJ_G0019286 ##27	Serpinb6d (MGP_SPRETEiJ_G0019285) #27	MGP_SPRETEiJ_G0019284 #31	MGP_SPRETEiJ_G0019283 #31	MGP_SPRETEiJ_G0019282 #31	MGP_SPRETEiJ_G0019281 #31	MGP_SPRETEiJ_G0019280 #31	Serpinb9c (MGP_SPRETEiJ_G0019279) #31	MGP_SPRETEiJ_G0019278 ##31	Serpinb9 (MGP_SPRETEiJ_G0019277) #31
spretus	MODERN SPECIES	4	Cdyl (MGP_SPRETEiJ_G0019308) #12	MGP_SPRETEiJ_G0019307	MGP_SPRETEiJ_G0019306	MGP_SPRETEiJ_G0019305	MGP_SPRETEiJ_G0019304	MGP_SPRETEiJ_G0019303 #13	MGP_SPRETEiJ_G0019302 #13	Tex56 (MGP_SPRETEiJ_G0019301) #15	MGP_SPRETEiJ_G0019300 #16	Prpf4b (MGP_SPRETEiJ_G0019299) #17	Fam50b (MGP_SPRETEiJ_G0019298) #18	Pxdc1 (MGP_SPRETEiJ_G0019297) #19	Slc22a23 (MGP_SPRETEiJ_G0019296) #20	Psmg4 (MGP_SPRETEiJ_G0019295) #21	MGP_SPRETEiJ_G0019294 #22	MGP_SPRETEiJ_G0019293 #22	MGP_SPRETEiJ_G0019292 #22	Bphl (MGP_SPRETEiJ_G0019291) #24	Ripk1 (MGP_SPRETEiJ_G0019290) #25	Nqo2 (MGP_SPRETEiJ_G0019289) #26	Serpinb6a (MGP_SPRETEiJ_G0019288) ##27	Serpinb6c (MGP_SPRETEiJ_G0019287) #27	MGP_SPRETEiJ_G0019286 ##27	Serpinb6d (MGP_SPRETEiJ_G0019285) #27	MGP_SPRETEiJ_G0019284 #31	MGP_SPRETEiJ_G0019283 #31	MGP_SPRETEiJ_G0019282 #31	MGP_SPRETEiJ_G0019281 #31	MGP_SPRETEiJ_G0019280 #31	Serpinb9c (MGP_SPRETEiJ_G0019279) #31	MGP_SPRETEiJ_G0019278 ##31
spretus	MODERN SPECIES	4	Rpp40 (MGP_SPRETEiJ_G0019309) #11	Cdyl (MGP_SPRETEiJ_G0019308) #12	MGP_SPRETEiJ_G0019307	MGP_SPRETEiJ_G0019306	MGP_SPRETEiJ_G0019305	MGP_SPRETEiJ_G0019304	MGP_SPRETEiJ_G0019303 #13	MGP_SPRETEiJ_G0019302 #13	Tex56 (MGP_SPRETEiJ_G0019301) #15	MGP_SPRETEiJ_G0019300 #16	Prpf4b (MGP_SPRETEiJ_G0019299) #17	Fam50b (MGP_SPRETEiJ_G0019298) #18	Pxdc1 (MGP_SPRETEiJ_G0019297) #19	Slc22a23 (MGP_SPRETEiJ_G0019296) #20	Psmg4 (MGP_SPRETEiJ_G0019295) #21	MGP_SPRETEiJ_G0019294 #22	MGP_SPRETEiJ_G0019293 #22	MGP_SPRETEiJ_G0019292 #22	Bphl (MGP_SPRETEiJ_G0019291) #24	Ripk1 (MGP_SPRETEiJ_G0019290) #25	Nqo2 (MGP_SPRETEiJ_G0019289) #26	Serpinb6a (MGP_SPRETEiJ_G0019288) ##27	Serpinb6c (MGP_SPRETEiJ_G0019287) #27	MGP_SPRETEiJ_G0019286 ##27	Serpinb6d (MGP_SPRETEiJ_G0019285) #27	MGP_SPRETEiJ_G0019284 #31	MGP_SPRETEiJ_G0019283 #31	MGP_SPRETEiJ_G0019282 #31	MGP_SPRETEiJ_G0019281 #31	MGP_SPRETEiJ_G0019280 #31	Serpinb9c (MGP_SPRETEiJ_G0019279) #31
Shrew mouse	DUPLICATION
Shrew mouse	MODERN SPECIES	7	Fars2 (MGP_PahariEiJ_G0019500) #8	Lyrm4 (MGP_PahariEiJ_G0019499) #9	Ppp1r3g (MGP_PahariEiJ_G0019498) #10	Rpp40 (MGP_PahariEiJ_G0019497) #11	Cdyl (MGP_PahariEiJ_G0019496) #12	Eci2 (MGP_PahariEiJ_G0019495) #13	Eci3 (MGP_PahariEiJ_G0019494) #13	Tex56 (MGP_PahariEiJ_G0019493) #15	MGP_PahariEiJ_G0019492 #16	Prpf4b (MGP_PahariEiJ_G0019491) #17	Fam50b (MGP_PahariEiJ_G0019490) #18	Pxdc1 (MGP_PahariEiJ_G0019489) #19	Slc22a23 (MGP_PahariEiJ_G0019488) #20	Psmg4 (MGP_PahariEiJ_G0019487) #21	Tubb2b (MGP_PahariEiJ_G0019486) #22	MGP_PahariEiJ_G0019485 #22	Bphl (MGP_PahariEiJ_G0019484) #24	Ripk1 (MGP_PahariEiJ_G0019483) #25	Nqo2 (MGP_PahariEiJ_G0019482) #26	Serpinb6a (MGP_PahariEiJ_G0019481) ##27	Serpinb6c (MGP_PahariEiJ_G0019480) #27	Serpinb6e (MGP_PahariEiJ_G0019479) #27	Serpinb6d (MGP_PahariEiJ_G0019478) #27	MGP_PahariEiJ_G0019477 #31	MGP_PahariEiJ_G0019476 #31	MGP_PahariEiJ_G0019475 #31	MGP_PahariEiJ_G0019474 #31	Serpinb9c (MGP_PahariEiJ_G0019473) #31	Serpinb9 (MGP_PahariEiJ_G0019472) #31	Serpinb6b (MGP_PahariEiJ_G0019471) #27	MGP_PahariEiJ_G0019470 #35
Shrew mouse	MODERN SPECIES	7	Nrn1 (MGP_PahariEiJ_G0019501) #7	Fars2 (MGP_PahariEiJ_G0019500) #8	Lyrm4 (MGP_PahariEiJ_G0019499) #9	Ppp1r3g (MGP_PahariEiJ_G0019498) #10	Rpp40 (MGP_PahariEiJ_G0019497) #11	Cdyl (MGP_PahariEiJ_G0019496) #12	Eci2 (MGP_PahariEiJ_G0019495) #13	Eci3 (MGP_PahariEiJ_G0019494) #13	Tex56 (MGP_PahariEiJ_G0019493) #15	MGP_PahariEiJ_G0019492 #16	Prpf4b (MGP_PahariEiJ_G0019491) #17	Fam50b (MGP_PahariEiJ_G0019490) #18	Pxdc1 (MGP_PahariEiJ_G0019489) #19	Slc22a23 (MGP_PahariEiJ_G0019488) #20	Psmg4 (MGP_PahariEiJ_G0019487) #21	Tubb2b (MGP_PahariEiJ_G0019486) #22	MGP_PahariEiJ_G0019485 #22	Bphl (MGP_PahariEiJ_G0019484) #24	Ripk1 (MGP_PahariEiJ_G0019483) #25	Nqo2 (MGP_PahariEiJ_G0019482) #26	Serpinb6a (MGP_PahariEiJ_G0019481) ##27	Serpinb6c (MGP_PahariEiJ_G0019480) #27	Serpinb6e (MGP_PahariEiJ_G0019479) #27	Serpinb6d (MGP_PahariEiJ_G0019478) #27	MGP_PahariEiJ_G0019477 #31	MGP_PahariEiJ_G0019476 #31	MGP_PahariEiJ_G0019475 #31	MGP_PahariEiJ_G0019474 #31	Serpinb9c (MGP_PahariEiJ_G0019473) #31	Serpinb9 (MGP_PahariEiJ_G0019472) #31	Serpinb6b (MGP_PahariEiJ_G0019471) #27
Upper Galilee mountains blind mole rat	DUPLICATION
Upper Galilee mountains blind mole rat	MODERN SPECIES	764	Rreb1 (ENSNGAG00000021506)	Ly86 (ENSNGAG00000011116)	F13a1 (ENSNGAG00000022897)	Nrn1 (ENSNGAG00000018954) #7	Fars2 (ENSNGAG00000021589) #8	Lyrm4 (ENSNGAG00000024207) #9	ENSNGAG00000023955 #11	Cdyl (ENSNGAG00000023764) #12	ENSNGAG00000020575 #13	Prpf4b (ENSNGAG00000023322) #17	ENSNGAG00000009942	Fam50b (ENSNGAG00000024017) #18	Pxdc1 (ENSNGAG00000004640) #19	Slc22a23 (ENSNGAG00000021185) #20	Psmg4 (ENSNGAG00000016957) #21	Tubb2b (ENSNGAG00000021437) #22	Tubb2a (ENSNGAG00000020746) #22	Bphl (ENSNGAG00000024371) #24	Ripk1 (ENSNGAG00000010576) #25
Upper Galilee mountains blind mole rat	MODERN SPECIES	764	Ly86 (ENSNGAG00000011116)	F13a1 (ENSNGAG00000022897)	Nrn1 (ENSNGAG00000018954) #7	Fars2 (ENSNGAG00000021589) #8	Lyrm4 (ENSNGAG00000024207) #9	ENSNGAG00000023955 #11	Cdyl (ENSNGAG00000023764) #12	ENSNGAG00000020575 #13	Prpf4b (ENSNGAG00000023322) #17	ENSNGAG00000009942	Fam50b (ENSNGAG00000024017) #18	Pxdc1 (ENSNGAG00000004640) #19	Slc22a23 (ENSNGAG00000021185) #20	Psmg4 (ENSNGAG00000016957) #21	Tubb2b (ENSNGAG00000021437) #22	Tubb2a (ENSNGAG00000020746) #22	Bphl (ENSNGAG00000024371) #24	Ripk1 (ENSNGAG00000010576) #25