Bilateria ANCESTRAL SPECIES ENSGT00940000154150 #22 Chordata ANCESTRAL SPECIES ENSGT00940000154150 #22 Vertebrata ANCESTRAL SPECIES ENSGT00940000154150 #22 Gnathostomata ANCESTRAL SPECIES 229 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289 #9 ENSGT00940000168147 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00940000167514 ENSGT00940000154150 #22 Euteleostomi ANCESTRAL SPECIES 39 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00940000167364 ENSGT00940000167514 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00940000156211.a.a ENSGT00940000162303.a.b ENSGT00940000156211.a.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Sarcopterygii ANCESTRAL SPECIES 40 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00940000167364 ENSGT00940000167514 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162303.a.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000161205 Tetrapoda ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00940000167364 ENSGT00940000167514 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000161205 Amniota ANCESTRAL SPECIES 3 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000161205 ENSGT00940000161637 Mammalia ANCESTRAL SPECIES 3 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C Theria ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Eutheria ANCESTRAL SPECIES 30 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Boreoeutheria ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Euarchontoglires ANCESTRAL SPECIES 7 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.h ##27 ENSGT00940000154931 #31 ENSGT00940000154519.g.b #27 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Euarchontoglires_A ANCESTRAL SPECIES 6 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Glires ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Rodentia ANCESTRAL SPECIES 6 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Rodentia_B ANCESTRAL SPECIES 8 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Myomorpha ANCESTRAL SPECIES 11 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Muroidea ANCESTRAL SPECIES 15 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Muroidea_A ANCESTRAL SPECIES 14 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q #13 ENSGT00940000155105.r #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.b ##27 ENSGT00940000154519.g.b.a #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT01000000215059 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Cricetidae ANCESTRAL SPECIES 22 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q #13 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.a.c.a #27 ENSGT00940000154519.g.b.a.d ##27 ENSGT00940000154519.g.b.a.c.b #33 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT01000000215059 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Cricetidae_B ANCESTRAL SPECIES 22 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q #13 ENSGT00940000155105.r #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.a.c.a #27 ENSGT00940000154519.g.b.a.d ##27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT01000000215059 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Prairie vole DUPLICATION Prairie vole MODERN SPECIES 3 Nrn1 (ENSMOCG00000015236) #7 Fars2 (ENSMOCG00000021203) #8 Lyrm4 (ENSMOCG00000015484) #9 Ppp1r3g (ENSMOCG00000005122) #10 Rpp40 (ENSMOCG00000000305) #11 Cdyl (ENSMOCG00000012115) #12 ENSMOCG00000009658 #13 ENSMOCG00000006528 #14 Tex56 (ENSMOCG00000011556) #15 Fam217a (ENSMOCG00000021508) #16 Prpf4b (ENSMOCG00000022394) #17 Fam50b (ENSMOCG00000009994) #18 Pxdc1 (ENSMOCG00000020484) #19 Slc22a23 (ENSMOCG00000009539) #20 Psmg4 (ENSMOCG00000020506) #21 Tubb2b (ENSMOCG00000021829) #22 Tubb2a (ENSMOCG00000021775) #23 Bphl (ENSMOCG00000012434) #24 Ripk1 (ENSMOCG00000002677) #25 Nqo2 (ENSMOCG00000007454) #26 ENSMOCG00000000484 #27 ENSMOCG00000016676 #28 ENSMOCG00000019022 #29 ENSMOCG00000011182 #30 ENSMOCG00000004352 #31 ENSMOCG00000010614 #32 ENSMOCG00000016281 #33 ENSMOCG00000000987 #34 ENSMOCG00000021377 #35 Wrnip1 (ENSMOCG00000002819) #36 ENSMOCG00000019965 #37 Prairie vole MODERN SPECIES 3 Fars2 (ENSMOCG00000021203) #8 Lyrm4 (ENSMOCG00000015484) #9 Ppp1r3g (ENSMOCG00000005122) #10 Rpp40 (ENSMOCG00000000305) #11 Cdyl (ENSMOCG00000012115) #12 ENSMOCG00000009658 #13 ENSMOCG00000006528 #14 Tex56 (ENSMOCG00000011556) #15 Fam217a (ENSMOCG00000021508) #16 Prpf4b (ENSMOCG00000022394) #17 Fam50b (ENSMOCG00000009994) #18 Pxdc1 (ENSMOCG00000020484) #19 Slc22a23 (ENSMOCG00000009539) #20 Psmg4 (ENSMOCG00000020506) #21 Tubb2b (ENSMOCG00000021829) #22 Tubb2a (ENSMOCG00000021775) #23 Bphl (ENSMOCG00000012434) #24 Ripk1 (ENSMOCG00000002677) #25 Nqo2 (ENSMOCG00000007454) #26 ENSMOCG00000000484 #27 ENSMOCG00000016676 #28 ENSMOCG00000019022 #29 ENSMOCG00000011182 #30 ENSMOCG00000004352 #31 ENSMOCG00000010614 #32 ENSMOCG00000016281 #33 ENSMOCG00000000987 #34 ENSMOCG00000021377 #35 Wrnip1 (ENSMOCG00000002819) #36 ENSMOCG00000019965 #37 Mylk4 (ENSMOCG00000014428) Northern American deer mouse MODERN SPECIES 18 Fars2 (ENSPEMG00000017477) #8 Lyrm4 (ENSPEMG00000030913) #9 Ppp1r3g (ENSPEMG00000014441) #10 Rpp40 (ENSPEMG00000020809) #11 Cdyl (ENSPEMG00000022690) #12 ENSPEMG00000021110 #13 ENSPEMG00000021161 #14 Tex56 (ENSPEMG00000020583) #15 Fam217a (ENSPEMG00000020354) #16 Prpf4b (ENSPEMG00000020358) #17 ENSPEMG00000031049 Fam50b (ENSPEMG00000024324) #18 Pxdc1 (ENSPEMG00000021893) #19 Slc22a23 (ENSPEMG00000020810) #20 Psmg4 (ENSPEMG00000020434) #21 Tubb2b (ENSPEMG00000008538) #22 ENSPEMG00000028800 Bphl (ENSPEMG00000020657) #24 Ripk1 (ENSPEMG00000014892) #25 Nqo2 (ENSPEMG00000022103) #26 ENSPEMG00000030940 ##27 ENSPEMG00000006842 ##27 ENSPEMG00000011189 #31 ENSPEMG00000029739 ##27 ENSPEMG00000025946 #31 ENSPEMG00000007216 #31 ENSPEMG00000007226 ##27 ENSPEMG00000024282 #31 ENSPEMG00000003771 #35 ENSPEMG00000030799 Wrnip1 (ENSPEMG00000000543) #36 Cricetinae ANCESTRAL SPECIES 20 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q #13 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.a.c.a #27 ENSGT00940000154931.d.i #31 ENSGT00940000154519.g.b.a.c.b #33 ENSGT00940000154931.d.j #31 ENSGT00940000154573 #35 ENSGT01000000215059 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 623 Fars2 (ENSMAUG00000008493) #8 Lyrm4 (ENSMAUG00000009051) #9 Rpp40 (ENSMAUG00000010268) #11 Cdyl (ENSMAUG00000011510) #12 ENSMAUG00000020164 #13 ENSMAUG00000001515 #14 Tex56 (ENSMAUG00000002707) #15 Fam217a (ENSMAUG00000004346) #16 Prpf4b (ENSMAUG00000007805) #17 ENSMAUG00000015060 Fam50b (ENSMAUG00000001407) #18 Pxdc1 (ENSMAUG00000016900) #19 Slc22a23 (ENSMAUG00000017453) #20 Psmg4 (ENSMAUG00000017755) #21 ENSMAUG00000018054 #22 Tubb2a (ENSMAUG00000018540) #22 Bphl (ENSMAUG00000000408) #24 Ripk1 (ENSMAUG00000000557) #25 Nqo2 (ENSMAUG00000000875) #26 ENSMAUG00000001093 #27 ENSMAUG00000001439 #31 ENSMAUG00000008075 #31 ENSMAUG00000009098 #33 ENSMAUG00000009345 #31 ENSMAUG00000009659 #35 Wrnip1 (ENSMAUG00000009914) #36 Mylk4 (ENSMAUG00000011053) Gmds (ENSMAUG00000011976) Foxc1 (ENSMAUG00000018460) Foxf2 (ENSMAUG00000012470) Foxq1 (ENSMAUG00000018519) Golden Hamster MODERN SPECIES 623 Nrn1 (ENSMAUG00000008121) #7 Fars2 (ENSMAUG00000008493) #8 Lyrm4 (ENSMAUG00000009051) #9 Rpp40 (ENSMAUG00000010268) #11 Cdyl (ENSMAUG00000011510) #12 ENSMAUG00000020164 #13 ENSMAUG00000001515 #14 Tex56 (ENSMAUG00000002707) #15 Fam217a (ENSMAUG00000004346) #16 Prpf4b (ENSMAUG00000007805) #17 ENSMAUG00000015060 Fam50b (ENSMAUG00000001407) #18 Pxdc1 (ENSMAUG00000016900) #19 Slc22a23 (ENSMAUG00000017453) #20 Psmg4 (ENSMAUG00000017755) #21 ENSMAUG00000018054 #22 Tubb2a (ENSMAUG00000018540) #22 Bphl (ENSMAUG00000000408) #24 Ripk1 (ENSMAUG00000000557) #25 Nqo2 (ENSMAUG00000000875) #26 ENSMAUG00000001093 #27 ENSMAUG00000001439 #31 ENSMAUG00000008075 #31 ENSMAUG00000009098 #33 ENSMAUG00000009345 #31 ENSMAUG00000009659 #35 Wrnip1 (ENSMAUG00000009914) #36 Mylk4 (ENSMAUG00000011053) Gmds (ENSMAUG00000011976) Foxc1 (ENSMAUG00000018460) Foxf2 (ENSMAUG00000012470) Chinese hamster chok1gshd DUPLICATION Chinese hamster chok1gshd MODERN SPECIES 317 Nrn1 (ENSCGRG00001017665) #7 ENSCGRG00001012890 Fars2 (ENSCGRG00001022626) #8 Lyrm4 (ENSCGRG00001020406) #9 Ppp1r3g (ENSCGRG00001001814) #10 Rpp40 (ENSCGRG00001018328) #11 ENSCGRG00001013878 Cdyl (ENSCGRG00001002703) #12 ENSCGRG00001021795 #13 Fam217a (ENSCGRG00001020164) #16 Prpf4b (ENSCGRG00001019388) #17 Fam50b (ENSCGRG00001009274) #18 Pxdc1 (ENSCGRG00001021838) #19 Slc22a23 (ENSCGRG00001010789) #20 Psmg4 (ENSCGRG00001017753) #21 Tubb2b (ENSCGRG00001008382) #22 Tubb2a (ENSCGRG00001020515) #22 Bphl (ENSCGRG00001014124) #24 Ripk1 (ENSCGRG00001014419) #25 Nqo2 (ENSCGRG00001004425) #26 ENSCGRG00001015437 #27 ENSCGRG00001020665 #27 ENSCGRG00001022043 #31 ENSCGRG00001021359 ENSCGRG00001014514 #31 ENSCGRG00001009851 ENSCGRG00001000139 #35 ENSCGRG00001007544 Wrnip1 (ENSCGRG00001020075) #36 Mylk4 (ENSCGRG00001012998) ENSCGRG00001020761 Chinese hamster chok1gshd MODERN SPECIES 317 ENSCGRG00001012890 Fars2 (ENSCGRG00001022626) #8 Lyrm4 (ENSCGRG00001020406) #9 Ppp1r3g (ENSCGRG00001001814) #10 Rpp40 (ENSCGRG00001018328) #11 ENSCGRG00001013878 Cdyl (ENSCGRG00001002703) #12 ENSCGRG00001021795 #13 Fam217a (ENSCGRG00001020164) #16 Prpf4b (ENSCGRG00001019388) #17 Fam50b (ENSCGRG00001009274) #18 Pxdc1 (ENSCGRG00001021838) #19 Slc22a23 (ENSCGRG00001010789) #20 Psmg4 (ENSCGRG00001017753) #21 Tubb2b (ENSCGRG00001008382) #22 Tubb2a (ENSCGRG00001020515) #22 Bphl (ENSCGRG00001014124) #24 Ripk1 (ENSCGRG00001014419) #25 Nqo2 (ENSCGRG00001004425) #26 ENSCGRG00001015437 #27 ENSCGRG00001020665 #27 ENSCGRG00001022043 #31 ENSCGRG00001021359 ENSCGRG00001014514 #31 ENSCGRG00001009851 ENSCGRG00001000139 #35 ENSCGRG00001007544 Wrnip1 (ENSCGRG00001020075) #36 Mylk4 (ENSCGRG00001012998) ENSCGRG00001020761 Gmds (ENSCGRG00001014163) Murinae ANCESTRAL SPECIES 21 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q #13 ENSGT00940000155105.r #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.b ##27 ENSGT00940000154573.k.b #35 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154931.d.o.a.a #31 ENSGT00940000154519.g.b.a.b #27 ENSGT00940000154573.l #35 ENSGT00940000154573.k.a #35 ENSGT01000000215059 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b Rat DUPLICATION Rat MODERN SPECIES 8 Fars2 (ENSRNOG00000016135) #8 Lyrm4 (ENSRNOG00000047970) #9 Ppp1r3g (ENSRNOG00000016222) #10 Rpp40 (ENSRNOG00000016226) #11 Cdyl (ENSRNOG00000032215) #12 Eci2 (ENSRNOG00000066714) #13 Eci3 (ENSRNOG00000029549) #14 Tex56p (ENSRNOG00000033763) #15 Fam217a (ENSRNOG00000016672) #16 Prpf4b (ENSRNOG00000016705) #17 Fam50b (ENSRNOG00000017083) #18 Pxdc1 (ENSRNOG00000017093) #19 Slc22a23 (ENSRNOG00000017210) #20 Psmg4 (ENSRNOG00000039265) #21 Tubb2a (ENSRNOG00000017558) #22 Tubb2b (ENSRNOG00000017445) #22 Bphl (ENSRNOG00000017577) #24 Ripk1 (ENSRNOG00000017787) #25 Serpinb6a (ENSRNOG00000017962) ##27 Nqo2 (ENSRNOG00000017820) #26 RGD1564786 (ENSRNOG00000063990) #27 Serpinb6e (ENSRNOG00000070025) #27 Serpinb9d (ENSRNOG00000022139) #31 Serpinb1b (ENSRNOG00000034229) #35 RGD1562844 (ENSRNOG00000048576) #31 Serpinb9 (ENSRNOG00000033772) #31 Serpinb6b (ENSRNOG00000016420) #27 Serpinb1a (ENSRNOG00000016581) #35 Wrnip1 (ENSRNOG00000017040) #36 ENSRNOG00000063699 Mylk4 (ENSRNOG00000070083) Rat MODERN SPECIES 8 Nrn1 (ENSRNOG00000050767) #7 Fars2 (ENSRNOG00000016135) #8 Lyrm4 (ENSRNOG00000047970) #9 Ppp1r3g (ENSRNOG00000016222) #10 Rpp40 (ENSRNOG00000016226) #11 Cdyl (ENSRNOG00000032215) #12 Eci2 (ENSRNOG00000066714) #13 Eci3 (ENSRNOG00000029549) #14 Tex56p (ENSRNOG00000033763) #15 Fam217a (ENSRNOG00000016672) #16 Prpf4b (ENSRNOG00000016705) #17 Fam50b (ENSRNOG00000017083) #18 Pxdc1 (ENSRNOG00000017093) #19 Slc22a23 (ENSRNOG00000017210) #20 Psmg4 (ENSRNOG00000039265) #21 Tubb2a (ENSRNOG00000017558) #22 Tubb2b (ENSRNOG00000017445) #22 Bphl (ENSRNOG00000017577) #24 Ripk1 (ENSRNOG00000017787) #25 Serpinb6a (ENSRNOG00000017962) ##27 Nqo2 (ENSRNOG00000017820) #26 RGD1564786 (ENSRNOG00000063990) #27 Serpinb6e (ENSRNOG00000070025) #27 Serpinb9d (ENSRNOG00000022139) #31 Serpinb1b (ENSRNOG00000034229) #35 RGD1562844 (ENSRNOG00000048576) #31 Serpinb9 (ENSRNOG00000033772) #31 Serpinb6b (ENSRNOG00000016420) #27 Serpinb1a (ENSRNOG00000016581) #35 Wrnip1 (ENSRNOG00000017040) #36 ENSRNOG00000063699 Mus ANCESTRAL SPECIES 18 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q.a #13 ENSGT00940000155105.q.b #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.b ##27 ENSGT00940000154519.g.b.a.a.a.a #27 ENSGT00940000154519.g.b.a.a.b.a #27 ENSGT00940000154519.g.b.a.a.a.b.a #27 ENSGT00940000154931.d.o.b #31 ENSGT00940000154931.d.p #31 ENSGT00940000154931.d.o.a.a #31 ENSGT00940000154519.g.b.a.b #27 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154573.k.b #35 ENSGT00940000154573.k.a #35 ENSGT01000000215059 Mus_A ANCESTRAL SPECIES 14 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q.a #13 ENSGT00940000155105.q.b #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.b ##27 ENSGT00940000154519.g.b.a.a.a.a #27 ENSGT00940000154519.g.a ##27 ENSGT00940000154931.d.o.a.a #31 ENSGT00940000154519.g.b.a.b #27 ENSGT00940000154573.l #35 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154573.k.b #35 ENSGT00940000154573.k.a #35 ENSGT01000000215059 ENSGT00390000008538 #36 ENSGT00940000156211.b Ryukyu mouse MODERN SPECIES 4 Nrn1 (MGP_CAROLIEiJ_G0018433) #7 Fars2 (MGP_CAROLIEiJ_G0018432) #8 Lyrm4 (MGP_CAROLIEiJ_G0018431) #9 Ppp1r3g (MGP_CAROLIEiJ_G0018430) #10 Rpp40 (MGP_CAROLIEiJ_G0018429) #11 Cdyl (MGP_CAROLIEiJ_G0018428) #12 Eci2 (MGP_CAROLIEiJ_G0018427) #13 Eci3 (MGP_CAROLIEiJ_G0018426) #13 Tex56 (MGP_CAROLIEiJ_G0018425) #15 MGP_CAROLIEiJ_G0018424 #16 Prpf4b (MGP_CAROLIEiJ_G0018423) #17 Fam50b (MGP_CAROLIEiJ_G0018422) #18 Pxdc1 (MGP_CAROLIEiJ_G0018421) #19 Slc22a23 (MGP_CAROLIEiJ_G0018420) #20 Psmg4 (MGP_CAROLIEiJ_G0018419) #21 MGP_CAROLIEiJ_G0018418 #22 Bphl (MGP_CAROLIEiJ_G0018417) #24 Ripk1 (MGP_CAROLIEiJ_G0018416) #25 Nqo2 (MGP_CAROLIEiJ_G0018415) #26 Serpinb6a (MGP_CAROLIEiJ_G0018414) ##27 Serpinb6c (MGP_CAROLIEiJ_G0018413) #27 MGP_CAROLIEiJ_G0018412 ##27 MGP_CAROLIEiJ_G0018411 #31 MGP_CAROLIEiJ_G0018410 #31 MGP_CAROLIEiJ_G0018409 #31 Serpinb9 (MGP_CAROLIEiJ_G0018408) #31 Serpinb6b (MGP_CAROLIEiJ_G0018407) #27 MGP_CAROLIEiJ_G0018406 #35 Serpinb1a (MGP_CAROLIEiJ_G0018405) #35 MGP_CAROLIEiJ_G0018404 Wrnip1 (MGP_CAROLIEiJ_G0018403) #36 Mus_B ANCESTRAL SPECIES 13 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q.a #13 ENSGT00940000155105.q.b #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.b ##27 ENSGT00940000154519.g.b.a.a.a.a #27 ENSGT00940000154519.g.b.a.a.b.a #27 ENSGT00940000154519.g.b.a.a.a.b.a #27 ENSGT00940000154931.d.o.b.a.a #31 ENSGT00940000154931.d.o.b.b #31 ENSGT00940000154931.d.p #31 ENSGT00940000154573.k.b #35 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154931.d.o.a.a #31 ENSGT00940000154519.g.b.a.b #27 ENSGT00940000154573.l #35 Mouse DUPLICATION Mouse MODERN SPECIES 4 Nrn1 (ENSMUSG00000039114) #7 Fars2 (ENSMUSG00000021420) #8 Lyrm4 (ENSMUSG00000046573) #9 Ppp1r3g (ENSMUSG00000050423) #10 Rpp40 (ENSMUSG00000021418) #11 Cdyl (ENSMUSG00000059288) #12 Eci2 (ENSMUSG00000021417) #13 Eci3 (ENSMUSG00000021416) #13 Tex56 (ENSMUSG00000021415) #15 Fam217a (ENSMUSG00000021414) #16 Prpf4b (ENSMUSG00000021413) #17 Fam50b (ENSMUSG00000038246) #18 Pxdc1 (ENSMUSG00000021411) #19 Slc22a23 (ENSMUSG00000038267) #20 Psmg4 (ENSMUSG00000071451) #21 Tubb2b (ENSMUSG00000045136) #22 Tubb2a (ENSMUSG00000058672) #22 Bphl (ENSMUSG00000038286) #24 Ripk1 (ENSMUSG00000021408) #25 Nqo2 (ENSMUSG00000046949) #26 Serpinb6a (ENSMUSG00000060147) ##27 Serpinb6c (ENSMUSG00000052180) #27 Serpinb6e (ENSMUSG00000069248) #27 Serpinb6d (ENSMUSG00000047889) #27 Serpinb9g (ENSMUSG00000057726) #31 Serpinb9h (ENSMUSG00000071452) #31 Serpinb9f (ENSMUSG00000038327) #31 Serpinb9e (ENSMUSG00000062342) #31 Serpinb9d (ENSMUSG00000054266) #31 Serpinb9c (ENSMUSG00000021404) #31 Serpinb1b (ENSMUSG00000051029) #35 Mouse MODERN SPECIES 4 Fars2 (ENSMUSG00000021420) #8 Lyrm4 (ENSMUSG00000046573) #9 Ppp1r3g (ENSMUSG00000050423) #10 Rpp40 (ENSMUSG00000021418) #11 Cdyl (ENSMUSG00000059288) #12 Eci2 (ENSMUSG00000021417) #13 Eci3 (ENSMUSG00000021416) #13 Tex56 (ENSMUSG00000021415) #15 Fam217a (ENSMUSG00000021414) #16 Prpf4b (ENSMUSG00000021413) #17 Fam50b (ENSMUSG00000038246) #18 Pxdc1 (ENSMUSG00000021411) #19 Slc22a23 (ENSMUSG00000038267) #20 Psmg4 (ENSMUSG00000071451) #21 Tubb2b (ENSMUSG00000045136) #22 Tubb2a (ENSMUSG00000058672) #22 Bphl (ENSMUSG00000038286) #24 Ripk1 (ENSMUSG00000021408) #25 Nqo2 (ENSMUSG00000046949) #26 Serpinb6a (ENSMUSG00000060147) ##27 Serpinb6c (ENSMUSG00000052180) #27 Serpinb6e (ENSMUSG00000069248) #27 Serpinb6d (ENSMUSG00000047889) #27 Serpinb9g (ENSMUSG00000057726) #31 Serpinb9h (ENSMUSG00000071452) #31 Serpinb9f (ENSMUSG00000038327) #31 Serpinb9e (ENSMUSG00000062342) #31 Serpinb9d (ENSMUSG00000054266) #31 Serpinb9c (ENSMUSG00000021404) #31 Serpinb1b (ENSMUSG00000051029) #35 Serpinb9b (ENSMUSG00000021403) #31 Mus_C ANCESTRAL SPECIES 10 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105.q.a #13 ENSGT00940000155105.q.b #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b.b ##27 ENSGT00940000154519.g.b.a.a.a.a #27 ENSGT00940000154519.g.b.a.a.b.a #27 ENSGT00940000154519.g.b.a.a.a.b.a #27 ENSGT00940000154931.d.o.b.a.a #31 ENSGT00940000154931.d.o.b.a.b #31 ENSGT00940000154931.d.o.b.b #31 ENSGT00940000154931.d.p #31 ENSGT00940000154573.k.b #35 ENSGT00940000154931.d.o.a.b #31 ENSGT00940000154931.d.o.a.a #31 ENSGT00940000154519.g.b.a.b #27 Steppe mouse DUPLICATION Steppe mouse MODERN SPECIES 2870 Btbd3 (ENSMSIG00000003269) ENSMSIG00000003305 #22 ENSMSIG00000003421 Steppe mouse MODERN SPECIES 2975 ENSMSIG00000002713 #13 Tex56 (ENSMSIG00000002912) #15 Fam217a (ENSMSIG00000002942) #16 Prpf4b (ENSMSIG00000003035) #17 ENSMSIG00000003077 Fam50b (ENSMSIG00000003082) #18 Pxdc1 (ENSMSIG00000003089) #19 Slc22a23 (ENSMSIG00000003104) #20 Psmg4 (ENSMSIG00000003186) #21 Tubb2a (ENSMSIG00000003218) #22 Bphl (ENSMSIG00000003262) #24 Ripk1 (ENSMSIG00000003307) #25 Nqo2 (ENSMSIG00000003346) #26 Serpinb6a (ENSMSIG00000003400) ##27 Serpinb6c (ENSMSIG00000003508) #27 Serpinb6e (ENSMSIG00000003547) #27 Serpinb6d (ENSMSIG00000003590) #27 spretus DUPLICATION spretus DUPLICATION spretus MODERN SPECIES 4 MGP_SPRETEiJ_G0019307 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019303 #13 MGP_SPRETEiJ_G0019302 #13 Tex56 (MGP_SPRETEiJ_G0019301) #15 MGP_SPRETEiJ_G0019300 #16 Prpf4b (MGP_SPRETEiJ_G0019299) #17 Fam50b (MGP_SPRETEiJ_G0019298) #18 Pxdc1 (MGP_SPRETEiJ_G0019297) #19 Slc22a23 (MGP_SPRETEiJ_G0019296) #20 Psmg4 (MGP_SPRETEiJ_G0019295) #21 MGP_SPRETEiJ_G0019294 #22 MGP_SPRETEiJ_G0019293 #22 MGP_SPRETEiJ_G0019292 #22 Bphl (MGP_SPRETEiJ_G0019291) #24 Ripk1 (MGP_SPRETEiJ_G0019290) #25 Nqo2 (MGP_SPRETEiJ_G0019289) #26 Serpinb6a (MGP_SPRETEiJ_G0019288) ##27 Serpinb6c (MGP_SPRETEiJ_G0019287) #27 MGP_SPRETEiJ_G0019286 ##27 Serpinb6d (MGP_SPRETEiJ_G0019285) #27 MGP_SPRETEiJ_G0019284 #31 MGP_SPRETEiJ_G0019283 #31 MGP_SPRETEiJ_G0019282 #31 MGP_SPRETEiJ_G0019281 #31 MGP_SPRETEiJ_G0019280 #31 Serpinb9c (MGP_SPRETEiJ_G0019279) #31 MGP_SPRETEiJ_G0019278 ##31 Serpinb9 (MGP_SPRETEiJ_G0019277) #31 spretus MODERN SPECIES 4 Cdyl (MGP_SPRETEiJ_G0019308) #12 MGP_SPRETEiJ_G0019307 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019303 #13 MGP_SPRETEiJ_G0019302 #13 Tex56 (MGP_SPRETEiJ_G0019301) #15 MGP_SPRETEiJ_G0019300 #16 Prpf4b (MGP_SPRETEiJ_G0019299) #17 Fam50b (MGP_SPRETEiJ_G0019298) #18 Pxdc1 (MGP_SPRETEiJ_G0019297) #19 Slc22a23 (MGP_SPRETEiJ_G0019296) #20 Psmg4 (MGP_SPRETEiJ_G0019295) #21 MGP_SPRETEiJ_G0019294 #22 MGP_SPRETEiJ_G0019293 #22 MGP_SPRETEiJ_G0019292 #22 Bphl (MGP_SPRETEiJ_G0019291) #24 Ripk1 (MGP_SPRETEiJ_G0019290) #25 Nqo2 (MGP_SPRETEiJ_G0019289) #26 Serpinb6a (MGP_SPRETEiJ_G0019288) ##27 Serpinb6c (MGP_SPRETEiJ_G0019287) #27 MGP_SPRETEiJ_G0019286 ##27 Serpinb6d (MGP_SPRETEiJ_G0019285) #27 MGP_SPRETEiJ_G0019284 #31 MGP_SPRETEiJ_G0019283 #31 MGP_SPRETEiJ_G0019282 #31 MGP_SPRETEiJ_G0019281 #31 MGP_SPRETEiJ_G0019280 #31 Serpinb9c (MGP_SPRETEiJ_G0019279) #31 MGP_SPRETEiJ_G0019278 ##31 spretus MODERN SPECIES 4 Rpp40 (MGP_SPRETEiJ_G0019309) #11 Cdyl (MGP_SPRETEiJ_G0019308) #12 MGP_SPRETEiJ_G0019307 MGP_SPRETEiJ_G0019306 MGP_SPRETEiJ_G0019305 MGP_SPRETEiJ_G0019304 MGP_SPRETEiJ_G0019303 #13 MGP_SPRETEiJ_G0019302 #13 Tex56 (MGP_SPRETEiJ_G0019301) #15 MGP_SPRETEiJ_G0019300 #16 Prpf4b (MGP_SPRETEiJ_G0019299) #17 Fam50b (MGP_SPRETEiJ_G0019298) #18 Pxdc1 (MGP_SPRETEiJ_G0019297) #19 Slc22a23 (MGP_SPRETEiJ_G0019296) #20 Psmg4 (MGP_SPRETEiJ_G0019295) #21 MGP_SPRETEiJ_G0019294 #22 MGP_SPRETEiJ_G0019293 #22 MGP_SPRETEiJ_G0019292 #22 Bphl (MGP_SPRETEiJ_G0019291) #24 Ripk1 (MGP_SPRETEiJ_G0019290) #25 Nqo2 (MGP_SPRETEiJ_G0019289) #26 Serpinb6a (MGP_SPRETEiJ_G0019288) ##27 Serpinb6c (MGP_SPRETEiJ_G0019287) #27 MGP_SPRETEiJ_G0019286 ##27 Serpinb6d (MGP_SPRETEiJ_G0019285) #27 MGP_SPRETEiJ_G0019284 #31 MGP_SPRETEiJ_G0019283 #31 MGP_SPRETEiJ_G0019282 #31 MGP_SPRETEiJ_G0019281 #31 MGP_SPRETEiJ_G0019280 #31 Serpinb9c (MGP_SPRETEiJ_G0019279) #31 Shrew mouse DUPLICATION Shrew mouse MODERN SPECIES 7 Fars2 (MGP_PahariEiJ_G0019500) #8 Lyrm4 (MGP_PahariEiJ_G0019499) #9 Ppp1r3g (MGP_PahariEiJ_G0019498) #10 Rpp40 (MGP_PahariEiJ_G0019497) #11 Cdyl (MGP_PahariEiJ_G0019496) #12 Eci2 (MGP_PahariEiJ_G0019495) #13 Eci3 (MGP_PahariEiJ_G0019494) #13 Tex56 (MGP_PahariEiJ_G0019493) #15 MGP_PahariEiJ_G0019492 #16 Prpf4b (MGP_PahariEiJ_G0019491) #17 Fam50b (MGP_PahariEiJ_G0019490) #18 Pxdc1 (MGP_PahariEiJ_G0019489) #19 Slc22a23 (MGP_PahariEiJ_G0019488) #20 Psmg4 (MGP_PahariEiJ_G0019487) #21 Tubb2b (MGP_PahariEiJ_G0019486) #22 MGP_PahariEiJ_G0019485 #22 Bphl (MGP_PahariEiJ_G0019484) #24 Ripk1 (MGP_PahariEiJ_G0019483) #25 Nqo2 (MGP_PahariEiJ_G0019482) #26 Serpinb6a (MGP_PahariEiJ_G0019481) ##27 Serpinb6c (MGP_PahariEiJ_G0019480) #27 Serpinb6e (MGP_PahariEiJ_G0019479) #27 Serpinb6d (MGP_PahariEiJ_G0019478) #27 MGP_PahariEiJ_G0019477 #31 MGP_PahariEiJ_G0019476 #31 MGP_PahariEiJ_G0019475 #31 MGP_PahariEiJ_G0019474 #31 Serpinb9c (MGP_PahariEiJ_G0019473) #31 Serpinb9 (MGP_PahariEiJ_G0019472) #31 Serpinb6b (MGP_PahariEiJ_G0019471) #27 MGP_PahariEiJ_G0019470 #35 Shrew mouse MODERN SPECIES 7 Nrn1 (MGP_PahariEiJ_G0019501) #7 Fars2 (MGP_PahariEiJ_G0019500) #8 Lyrm4 (MGP_PahariEiJ_G0019499) #9 Ppp1r3g (MGP_PahariEiJ_G0019498) #10 Rpp40 (MGP_PahariEiJ_G0019497) #11 Cdyl (MGP_PahariEiJ_G0019496) #12 Eci2 (MGP_PahariEiJ_G0019495) #13 Eci3 (MGP_PahariEiJ_G0019494) #13 Tex56 (MGP_PahariEiJ_G0019493) #15 MGP_PahariEiJ_G0019492 #16 Prpf4b (MGP_PahariEiJ_G0019491) #17 Fam50b (MGP_PahariEiJ_G0019490) #18 Pxdc1 (MGP_PahariEiJ_G0019489) #19 Slc22a23 (MGP_PahariEiJ_G0019488) #20 Psmg4 (MGP_PahariEiJ_G0019487) #21 Tubb2b (MGP_PahariEiJ_G0019486) #22 MGP_PahariEiJ_G0019485 #22 Bphl (MGP_PahariEiJ_G0019484) #24 Ripk1 (MGP_PahariEiJ_G0019483) #25 Nqo2 (MGP_PahariEiJ_G0019482) #26 Serpinb6a (MGP_PahariEiJ_G0019481) ##27 Serpinb6c (MGP_PahariEiJ_G0019480) #27 Serpinb6e (MGP_PahariEiJ_G0019479) #27 Serpinb6d (MGP_PahariEiJ_G0019478) #27 MGP_PahariEiJ_G0019477 #31 MGP_PahariEiJ_G0019476 #31 MGP_PahariEiJ_G0019475 #31 MGP_PahariEiJ_G0019474 #31 Serpinb9c (MGP_PahariEiJ_G0019473) #31 Serpinb9 (MGP_PahariEiJ_G0019472) #31 Serpinb6b (MGP_PahariEiJ_G0019471) #27 Upper Galilee mountains blind mole rat DUPLICATION Upper Galilee mountains blind mole rat MODERN SPECIES 764 Rreb1 (ENSNGAG00000021506) Ly86 (ENSNGAG00000011116) F13a1 (ENSNGAG00000022897) Nrn1 (ENSNGAG00000018954) #7 Fars2 (ENSNGAG00000021589) #8 Lyrm4 (ENSNGAG00000024207) #9 ENSNGAG00000023955 #11 Cdyl (ENSNGAG00000023764) #12 ENSNGAG00000020575 #13 Prpf4b (ENSNGAG00000023322) #17 ENSNGAG00000009942 Fam50b (ENSNGAG00000024017) #18 Pxdc1 (ENSNGAG00000004640) #19 Slc22a23 (ENSNGAG00000021185) #20 Psmg4 (ENSNGAG00000016957) #21 Tubb2b (ENSNGAG00000021437) #22 Tubb2a (ENSNGAG00000020746) #22 Bphl (ENSNGAG00000024371) #24 Ripk1 (ENSNGAG00000010576) #25 Upper Galilee mountains blind mole rat MODERN SPECIES 764 Ly86 (ENSNGAG00000011116) F13a1 (ENSNGAG00000022897) Nrn1 (ENSNGAG00000018954) #7 Fars2 (ENSNGAG00000021589) #8 Lyrm4 (ENSNGAG00000024207) #9 ENSNGAG00000023955 #11 Cdyl (ENSNGAG00000023764) #12 ENSNGAG00000020575 #13 Prpf4b (ENSNGAG00000023322) #17 ENSNGAG00000009942 Fam50b (ENSNGAG00000024017) #18 Pxdc1 (ENSNGAG00000004640) #19 Slc22a23 (ENSNGAG00000021185) #20 Psmg4 (ENSNGAG00000016957) #21 Tubb2b (ENSNGAG00000021437) #22 Tubb2a (ENSNGAG00000020746) #22 Bphl (ENSNGAG00000024371) #24 Ripk1 (ENSNGAG00000010576) #25 Lesser Egyptian jerboa MODERN SPECIES 129 Ly86 (ENSJJAG00000022504) F13a1 (ENSJJAG00000000070) Nrn1 (ENSJJAG00000000725) #7 Fars2 (ENSJJAG00000002799) #8 Lyrm4 (ENSJJAG00000004657) #9 Rpp40 (ENSJJAG00000020629) #11 Cdyl (ENSJJAG00000000586) #12 ENSJJAG00000001626 ENSJJAG00000004231 #13 Tex56 (ENSJJAG00000008898) #15 ENSJJAG00000010338 #16 Prpf4b (ENSJJAG00000011217) #17 Pxdc1 (ENSJJAG00000012785) #19 Slc22a23 (ENSJJAG00000005711) #20 Psmg4 (ENSJJAG00000011408) #21 Tubb2b (ENSJJAG00000011739) #22 Bphl (ENSJJAG00000012949) #24 Ripk1 (ENSJJAG00000013771) #25 Nqo2 (ENSJJAG00000015012) #26 ENSJJAG00000015735 #27 ENSJJAG00000017382 #31 ENSJJAG00000010900 #35 Wrnip1 (ENSJJAG00000011299) #36 ENSJJAG00000013456 Gmds (ENSJJAG00000015490) ENSJJAG00000015833 Foxf2 (ENSJJAG00000017530) ENSJJAG00000017878 Irf4 (ENSJJAG00000019182) Dusp22 (ENSJJAG00000019867) Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat DUPLICATION Kangaroo rat MODERN SPECIES 220 ENSDORG00000024731 #22 ENSDORG00000029362 #22 Kangaroo rat MODERN SPECIES 220 ENSDORG00000024731 #22 ENSDORG00000029362 #22 Kangaroo rat MODERN SPECIES 221 ENSDORG00000027765 #22 Kangaroo rat MODERN SPECIES 351 Nqo2 (ENSDORG00000010390) #26 Ripk1 (ENSDORG00000010392) #25 ENSDORG00000029944 #11 ENSDORG00000011196 #11 ENSDORG00000028660 Cdyl (ENSDORG00000002812) #12 ENSDORG00000023689 ENSDORG00000004072 #13 Tex56 (ENSDORG00000024679) #15 ENSDORG00000025392 ENSDORG00000025074 #16 Prpf4b (ENSDORG00000000464) #17 Pxdc1 (ENSDORG00000029672) #19 Slc22a23 (ENSDORG00000010217) #20 ENSDORG00000010216 #21 Tubb2b (ENSDORG00000029767) #22 ENSDORG00000025335 ENSDORG00000030064 #22 Bphl (ENSDORG00000012891) #24 Lyrm4 (ENSDORG00000029399) #9 Fars2 (ENSDORG00000014796) #8 Nrn1 (ENSDORG00000028098) #7 F13a1 (ENSDORG00000005435) Ly86 (ENSDORG00000009360) Rreb1 (ENSDORG00000006979) Ssr1 (ENSDORG00000009319) Cage1 (ENSDORG00000004490) Riok1 (ENSDORG00000008530) Dsp (ENSDORG00000000359) Snrnp48 (ENSDORG00000015140) Bmp6 (ENSDORG00000004681) Kangaroo rat MODERN SPECIES 351 ENSDORG00000029944 #11 ENSDORG00000011196 #11 ENSDORG00000028660 Cdyl (ENSDORG00000002812) #12 ENSDORG00000023689 ENSDORG00000004072 #13 Tex56 (ENSDORG00000024679) #15 ENSDORG00000025392 ENSDORG00000025074 #16 Prpf4b (ENSDORG00000000464) #17 Pxdc1 (ENSDORG00000029672) #19 Slc22a23 (ENSDORG00000010217) #20 ENSDORG00000010216 #21 Tubb2b (ENSDORG00000029767) #22 ENSDORG00000025335 ENSDORG00000030064 #22 Bphl (ENSDORG00000012891) #24 Lyrm4 (ENSDORG00000029399) #9 Fars2 (ENSDORG00000014796) #8 Nrn1 (ENSDORG00000028098) #7 F13a1 (ENSDORG00000005435) Ly86 (ENSDORG00000009360) Rreb1 (ENSDORG00000006979) Ssr1 (ENSDORG00000009319) Cage1 (ENSDORG00000004490) Riok1 (ENSDORG00000008530) Dsp (ENSDORG00000000359) Snrnp48 (ENSDORG00000015140) Bmp6 (ENSDORG00000004681) Txndc5 (ENSDORG00000004682) ENSDORG00000027767 Rodentia_A ANCESTRAL SPECIES 26 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.c.a.b ##31 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Sciuridae ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.c.a.b ##31 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00390000012138.a.b.t.ab ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Eurasian red squirrel DUPLICATION Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 17 ENSSVLG00005004818 MPLKIP (ENSSVLG00005004837) SUGCT (ENSSVLG00005004898) ENSSVLG00005005063 ENSSVLG00005005081 INHBA (ENSSVLG00005005151) GLI3 (ENSSVLG00005005178) C7orf25 (ENSSVLG00005005209) PSMA2 (ENSSVLG00005005237) MRPL32 (ENSSVLG00005005303) ENSSVLG00005005320 HECW1 (ENSSVLG00005005468) STK17A (ENSSVLG00005005990) COA1 (ENSSVLG00005006028) BLVRA (ENSSVLG00005006049) ENSSVLG00005006086 #22 MRPS24 (ENSSVLG00005006180) URGCP (ENSSVLG00005006226) ENSSVLG00005006336 UBE2D4 (ENSSVLG00005006358) DBNL (ENSSVLG00005006493) PGAM2 (ENSSVLG00005006699) POLM (ENSSVLG00005006728) AEBP1 (ENSSVLG00005006770) POLD2 (ENSSVLG00005006846) MYL7 (ENSSVLG00005006900) GCK (ENSSVLG00005006971) ENSSVLG00005007143 CAMK2B (ENSSVLG00005007607) NUDCD3 (ENSSVLG00005008781) NPC1L1 (ENSSVLG00005008888) Eurasian red squirrel MODERN SPECIES 2 BDNF (ENSSVLG00005007577) KIF18A (ENSSVLG00005007495) ENSSVLG00005007473 METTL15 (ENSSVLG00005007460) KCNA4 (ENSSVLG00005007441) FSHB (ENSSVLG00005007418) ARL14EP (ENSSVLG00005007404) MPPED2 (ENSSVLG00005007385) ENSSVLG00005007367 DCDC1 (ENSSVLG00005007148) DNAJC24 (ENSSVLG00005007079) IMMP1L (ENSSVLG00005007051) ELP4 (ENSSVLG00005007005) PAX6 (ENSSVLG00005006723) ENSSVLG00005006643 ENSSVLG00005006612 #22 RCN1 (ENSSVLG00005006575) ENSSVLG00005006549 WT1 (ENSSVLG00005006232) EIF3M (ENSSVLG00005006089) CCDC73 (ENSSVLG00005005944) PRRG4 (ENSSVLG00005005895) QSER1 (ENSSVLG00005005823) DEPDC7 (ENSSVLG00005005722) TCP11L1 (ENSSVLG00005005675) CSTF3 (ENSSVLG00005005518) ENSSVLG00005005475 HIPK3 (ENSSVLG00005005422) KIAA1549L (ENSSVLG00005005254) C11orf91 (ENSSVLG00005005211) ENSSVLG00005005193 Eurasian red squirrel MODERN SPECIES 16 NRN1 (ENSSVLG00005008393) #7 FARS2 (ENSSVLG00005008373) #8 ENSSVLG00005008346 LYRM4 (ENSSVLG00005008312) #9 PPP1R3G (ENSSVLG00005008297) #10 RPP40 (ENSSVLG00005008216) #11 CDYL (ENSSVLG00005008158) #12 ECI2 (ENSSVLG00005008033) #13 ENSSVLG00005007999 #15 ENSSVLG00005007911 #16 PRPF4B (ENSSVLG00005007879) #17 FAM50B (ENSSVLG00005007859) #18 PXDC1 (ENSSVLG00005007821) #19 SLC22A23 (ENSSVLG00005007747) #20 PSMG4 (ENSSVLG00005007683) #21 TUBB2B (ENSSVLG00005007652) #22 TUBB2A (ENSSVLG00005007615) #22 ENSSVLG00005007569 #24 RIPK1 (ENSSVLG00005007529) #25 NQO2 (ENSSVLG00005007475) #26 SERPINB6 (ENSSVLG00005007395) #27 ENSSVLG00005007366 ENSSVLG00005006719 #31 ENSSVLG00005006449 #31 SERPINB1 (ENSSVLG00005006417) #35 WRNIP1 (ENSSVLG00005006348) #36 ENSSVLG00005006323 MYLK4 (ENSSVLG00005006200) ENSSVLG00005006132 GMDS (ENSSVLG00005014861) FOXC1 (ENSSVLG00005014837) Eurasian red squirrel MODERN SPECIES 16 FARS2 (ENSSVLG00005008373) #8 ENSSVLG00005008346 LYRM4 (ENSSVLG00005008312) #9 PPP1R3G (ENSSVLG00005008297) #10 RPP40 (ENSSVLG00005008216) #11 CDYL (ENSSVLG00005008158) #12 ECI2 (ENSSVLG00005008033) #13 ENSSVLG00005007999 #15 ENSSVLG00005007911 #16 PRPF4B (ENSSVLG00005007879) #17 FAM50B (ENSSVLG00005007859) #18 PXDC1 (ENSSVLG00005007821) #19 SLC22A23 (ENSSVLG00005007747) #20 PSMG4 (ENSSVLG00005007683) #21 TUBB2B (ENSSVLG00005007652) #22 TUBB2A (ENSSVLG00005007615) #22 ENSSVLG00005007569 #24 RIPK1 (ENSSVLG00005007529) #25 NQO2 (ENSSVLG00005007475) #26 SERPINB6 (ENSSVLG00005007395) #27 ENSSVLG00005007366 ENSSVLG00005006719 #31 ENSSVLG00005006449 #31 SERPINB1 (ENSSVLG00005006417) #35 WRNIP1 (ENSSVLG00005006348) #36 ENSSVLG00005006323 MYLK4 (ENSSVLG00005006200) ENSSVLG00005006132 GMDS (ENSSVLG00005014861) FOXC1 (ENSSVLG00005014837) FOXF2 (ENSSVLG00005014790) Eurasian red squirrel MODERN SPECIES 11 OR4Q3 (ENSSVLG00005002974) ENSSVLG00005002963 ENSSVLG00005002955 ENSSVLG00005002945 ENSSVLG00005002922 ENSSVLG00005002909 ENSSVLG00005002897 ENSSVLG00005002883 OR11G2 (ENSSVLG00005002875) ENSSVLG00005002866 OR11H6 (ENSSVLG00005002859) OR11H4 (ENSSVLG00005002848) TTC5 (ENSSVLG00005002830) CCNB1IP1 (ENSSVLG00005002813) PARP2 (ENSSVLG00005002754) ENSSVLG00005002730 #22 TEP1 (ENSSVLG00005002176) KLHL33 (ENSSVLG00005001900) OSGEP (ENSSVLG00005001856) APEX1 (ENSSVLG00005001829) PIP4P1 (ENSSVLG00005001794) PNP (ENSSVLG00005001773) RNASE10 (ENSSVLG00005001759) ENSSVLG00005001749 ENSSVLG00005001741 RNASE11 (ENSSVLG00005001735) RNASE12 (ENSSVLG00005001727) OR6S1 (ENSSVLG00005001715) ANG (ENSSVLG00005001703) RNASE4 (ENSSVLG00005001692) ENSSVLG00005001670 Marmotini DUPLICATION Marmotini DUPLICATION Marmotini ANCESTRAL SPECIES 37 ENSGT00390000000878.h.a ENSGT00390000014833 ENSGT00940000164650 ENSGT00390000011295.b ENSGT00940000155602 ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167.n ENSGT00940000153470.a.a.a.b.m.a ENSGT00940000154150.gd.a #22 ENSGT00770000120611.B ENSGT00390000007287 ENSGT00940000156475 ENSGT00940000158500 ENSGT00940000155880 ENSGT00940000155957 ENSGT00390000009405.a.a.a.b.a.b.a.b ENSGT00390000015236 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000154431.e.b ENSGT00940000153305.c.e.b ENSGT00940000156007 ENSGT00390000017856.a ENSGT00940000157315 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00390000014833 ENSGT00390000011295.b ENSGT00940000155602 ENSGT00390000000118 ENSGT00950000183188.B ENSGT00390000015035 ENSGT00940000154957.B ENSGT00940000157167.n ENSGT01030000235027 ENSGT00940000154530.w ENSGT00940000153470.a.a.a.b.m.a ENSGT00940000154150.gd.a #22 ENSGT00770000120611.B ENSGT00390000007287 ENSGT00940000156475 ENSGT00940000158500 ENSGT00940000155880 ENSGT00940000155957 ENSGT00390000009405.a.a.a.b.a.b.a.b ENSGT00390000015236 ENSGT00390000003271 ENSGT00950000182892.a.b.b ENSGT00940000154431.e.b ENSGT00940000153305.c.e.b ENSGT00940000156007 ENSGT00390000017856.a ENSGT00940000157315 Squirrel DUPLICATION Squirrel MODERN SPECIES 78 TOMM7 (ENSSTOG00000008694) HYCC1 (ENSSTOG00000027983) KLHL7 (ENSSTOG00000008470) NUP42 (ENSSTOG00000008486) GPNMB (ENSSTOG00000008499) MALSU1 (ENSSTOG00000027376) IGF2BP3 (ENSSTOG00000008519) TRA2A (ENSSTOG00000012073) ENSSTOG00000030692 ENSSTOG00000032668 CCDC126 (ENSSTOG00000021255) ENSSTOG00000029732 ENSSTOG00000020371 #22 ENSSTOG00000014113 ENSSTOG00000027960 #22 STK31 (ENSSTOG00000003577) ENSSTOG00000033576 ENSSTOG00000021917 NPY (ENSSTOG00000020410) PALS2 (ENSSTOG00000001908) ENSSTOG00000014905 OSBPL3 (ENSSTOG00000001755) C7orf31 (ENSSTOG00000008859) NPVF (ENSSTOG00000008873) NFE2L3 (ENSSTOG00000014758) ENSSTOG00000006202 CBX3 (ENSSTOG00000006223) SNX10 (ENSSTOG00000024131) Squirrel MODERN SPECIES 78 HOXA1 (ENSSTOG00000024209) SKAP2 (ENSSTOG00000021247) SNX10 (ENSSTOG00000024131) CBX3 (ENSSTOG00000006223) ENSSTOG00000006202 NFE2L3 (ENSSTOG00000014758) NPVF (ENSSTOG00000008873) C7orf31 (ENSSTOG00000008859) OSBPL3 (ENSSTOG00000001755) ENSSTOG00000014905 PALS2 (ENSSTOG00000001908) NPY (ENSSTOG00000020410) ENSSTOG00000021917 ENSSTOG00000033576 STK31 (ENSSTOG00000003577) ENSSTOG00000027960 #22 ENSSTOG00000014113 ENSSTOG00000020371 #22 ENSSTOG00000029732 CCDC126 (ENSSTOG00000021255) ENSSTOG00000032668 ENSSTOG00000030692 TRA2A (ENSSTOG00000012073) IGF2BP3 (ENSSTOG00000008519) MALSU1 (ENSSTOG00000027376) GPNMB (ENSSTOG00000008499) NUP42 (ENSSTOG00000008486) KLHL7 (ENSSTOG00000008470) HYCC1 (ENSSTOG00000027983) TOMM7 (ENSSTOG00000008694) Alpin marmot MODERN SPECIES 26 ENSMMMG00000005021 ENSMMMG00000005025 TOMM7 (ENSMMMG00000005059) ENSMMMG00000005078 HYCC1 (ENSMMMG00000005151) ENSMMMG00000005220 KLHL7 (ENSMMMG00000005243) NUP42 (ENSMMMG00000005252) GPNMB (ENSMMMG00000005258) MALSU1 (ENSMMMG00000005281) IGF2BP3 (ENSMMMG00000005303) TRA2A (ENSMMMG00000005330) ENSMMMG00000005357 ENSMMMG00000005362 #22 ENSMMMG00000005429 STK31 (ENSMMMG00000005447) ENSMMMG00000005635 NPY (ENSMMMG00000005649) PALS2 (ENSMMMG00000005665) GSDME (ENSMMMG00000005813) OSBPL3 (ENSMMMG00000005837) ENSMMMG00000006125 C7orf31 (ENSMMMG00000006134) NPVF (ENSMMMG00000006151) ENSMMMG00000006190 ENSMMMG00000006197 ENSMMMG00000006360 SNX10 (ENSMMMG00000006398) ENSMMMG00000006429 Marmotini ANCESTRAL SPECIES 37 ENSGT00390000015821 ENSGT00530000063186.b.a ENSGT00940000155450 ENSGT00390000001319 ENSGT00940000160556 ENSGT00530000063608.A ENSGT00940000155909 ENSGT00940000156004 ENSGT00940000161552 ENSGT00940000156782.c ENSGT00940000162844 ENSGT00520000055647.a ENSGT00720000108792.A ENSGT00940000161703 ENSGT00940000154150.gd.b #22 ENSGT00940000157781 ENSGT00390000014376 ENSGT00940000161393 ENSGT00390000000706 ENSGT00940000162104 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Marmotini_b ANCESTRAL SPECIES 26 ENSGT00940000161703 ENSGT00940000154150.gd.b #22 ENSGT00940000157781 ENSGT00390000014376 ENSGT00940000161393 ENSGT00390000000706 ENSGT00940000162104 ENSGT00940000156328.b ENSGT00940000158092 ENSGT00940000157394 ENSGT00940000154872.C ENSGT00940000161026 ENSGT00730000111762 ENSGT01030000234607.A.a.b.a ENSGT00940000161501 ENSGT00390000016168.a ENSGT00940000158053 Arctic ground squirrel MODERN SPECIES 499 ABCA13 (ENSUPAG00010000302) ENSUPAG00010000185 #22 UPP1 (ENSUPAG00010000153) SUN3 (ENSUPAG00010000131) C7orf57 (ENSUPAG00010000060) HUS1 (ENSUPAG00010000045) PKD1L1 (ENSUPAG00010022631) Squirrel MODERN SPECIES 78 ENSSTOG00000032455 ENSSTOG00000026135 #22 UPP1 (ENSSTOG00000005502) C7orf57 (ENSSTOG00000005482) SUN3 (ENSSTOG00000005471) HUS1 (ENSSTOG00000027204) ENSSTOG00000005345 TNS3 (ENSSTOG00000015793) IGFBP3 (ENSSTOG00000008762) IGFBP1 (ENSSTOG00000008746) ADCY1 (ENSSTOG00000008713) ENSSTOG00000015205 RAMP3 (ENSSTOG00000025331) ENSSTOG00000020680 TBRG4 (ENSSTOG00000008370) NACAD (ENSSTOG00000022804) CCM2 (ENSSTOG00000026702) Alpin marmot MODERN SPECIES 26 ENSMMMG00000015809 ENSMMMG00000015788 ENSMMMG00000015785 ENSMMMG00000015775 ENSMMMG00000015722 GRB10 (ENSMMMG00000015688) DDC (ENSMMMG00000015645) FIGNL1 (ENSMMMG00000015635) IKZF1 (ENSMMMG00000015562) SPATA48 (ENSMMMG00000015542) ZPBP (ENSMMMG00000015506) VWC2 (ENSMMMG00000015492) ENSMMMG00000015482 ENSMMMG00000015465 ABCA13 (ENSMMMG00000015281) ENSMMMG00000015221 #22 UPP1 (ENSMMMG00000015208) C7orf57 (ENSMMMG00000015182) SUN3 (ENSMMMG00000015174) HUS1 (ENSMMMG00000015160) PKD1L1 (ENSMMMG00000015029) TNS3 (ENSMMMG00000014995) ENSMMMG00000014987 ENSMMMG00000014980 ENSMMMG00000014975 IGFBP3 (ENSMMMG00000014868) IGFBP1 (ENSMMMG00000014859) ADCY1 (ENSMMMG00000014821) RAMP3 (ENSMMMG00000014813) ENSMMMG00000014809 ENSMMMG00000014801 Marmotini ANCESTRAL SPECIES 40 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.hd #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 Alpin marmot MODERN SPECIES 36 F13A1 (ENSMMMG00000014594) NRN1 (ENSMMMG00000014586) #7 FARS2 (ENSMMMG00000014567) #8 LYRM4 (ENSMMMG00000014551) #9 PPP1R3G (ENSMMMG00000014548) #10 RPP40 (ENSMMMG00000014521) #11 CDYL (ENSMMMG00000014357) #12 ECI2 (ENSMMMG00000014301) #13 ENSMMMG00000014296 #15 FAM217A (ENSMMMG00000014281) #16 PRPF4B (ENSMMMG00000014263) #17 FAM50B (ENSMMMG00000014258) #18 ENSMMMG00000014254 #19 ENSMMMG00000014241 SLC22A23 (ENSMMMG00000014224) #20 TUBB2B (ENSMMMG00000014205) #22 BPHL (ENSMMMG00000014194) #24 RIPK1 (ENSMMMG00000014179) #25 Marmotini_b ANCESTRAL SPECIES 68 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00390000015826.x ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.hd #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 Arctic ground squirrel DUPLICATION Arctic ground squirrel MODERN SPECIES 350 PPP1R3G (ENSUPAG00010010716) #10 RPP40 (ENSUPAG00010010701) #11 ENSUPAG00010010692 CDYL (ENSUPAG00010010685) #12 ECI2 (ENSUPAG00010010667) #13 ENSUPAG00010010661 #15 FAM217A (ENSUPAG00010010641) #16 PRPF4B (ENSUPAG00010010629) #17 FAM50B (ENSUPAG00010010626) #18 PXDC1 (ENSUPAG00010010623) #19 ENSUPAG00010010614 SLC22A23 (ENSUPAG00010010597) #20 PSMG4 (ENSUPAG00010010591) #21 ENSUPAG00010010587 TUBB2B (ENSUPAG00010010579) #22 ENSUPAG00010010577 #22 BPHL (ENSUPAG00010010568) #24 RIPK1 (ENSUPAG00010010546) #25 Arctic ground squirrel MODERN SPECIES 350 PPP1R3G (ENSUPAG00010010716) #10 RPP40 (ENSUPAG00010010701) #11 ENSUPAG00010010692 CDYL (ENSUPAG00010010685) #12 ECI2 (ENSUPAG00010010667) #13 ENSUPAG00010010661 #15 FAM217A (ENSUPAG00010010641) #16 PRPF4B (ENSUPAG00010010629) #17 FAM50B (ENSUPAG00010010626) #18 PXDC1 (ENSUPAG00010010623) #19 ENSUPAG00010010614 SLC22A23 (ENSUPAG00010010597) #20 PSMG4 (ENSUPAG00010010591) #21 ENSUPAG00010010587 TUBB2B (ENSUPAG00010010579) #22 ENSUPAG00010010577 #22 BPHL (ENSUPAG00010010568) #24 RIPK1 (ENSUPAG00010010546) #25 Squirrel DUPLICATION Squirrel MODERN SPECIES 134 ENSSTOG00000024647 #7 FARS2 (ENSSTOG00000012156) #8 LYRM4 (ENSSTOG00000026736) #9 PPP1R3G (ENSSTOG00000021636) #10 RPP40 (ENSSTOG00000011199) #11 CDYL (ENSSTOG00000011187) #12 ECI2 (ENSSTOG00000004305) #13 ENSSTOG00000030065 #15 FAM217A (ENSSTOG00000030768) #16 PRPF4B (ENSSTOG00000004256) #17 FAM50B (ENSSTOG00000026905) #18 PXDC1 (ENSSTOG00000027169) #19 ENSSTOG00000030156 SLC22A23 (ENSSTOG00000031179) #20 PSMG4 (ENSSTOG00000020187) #21 TUBB2B (ENSSTOG00000022186) #22 TUBB2A (ENSSTOG00000024688) #22 BPHL (ENSSTOG00000001554) #24 RIPK1 (ENSSTOG00000001542) #25 Squirrel MODERN SPECIES 134 FARS2 (ENSSTOG00000012156) #8 LYRM4 (ENSSTOG00000026736) #9 PPP1R3G (ENSSTOG00000021636) #10 RPP40 (ENSSTOG00000011199) #11 CDYL (ENSSTOG00000011187) #12 ECI2 (ENSSTOG00000004305) #13 ENSSTOG00000030065 #15 FAM217A (ENSSTOG00000030768) #16 PRPF4B (ENSSTOG00000004256) #17 FAM50B (ENSSTOG00000026905) #18 PXDC1 (ENSSTOG00000027169) #19 ENSSTOG00000030156 SLC22A23 (ENSSTOG00000031179) #20 PSMG4 (ENSSTOG00000020187) #21 TUBB2B (ENSSTOG00000022186) #22 TUBB2A (ENSSTOG00000024688) #22 BPHL (ENSSTOG00000001554) #24 RIPK1 (ENSSTOG00000001542) #25 Hystricomorpha ANCESTRAL SPECIES 42 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000036093 ENSHGLG00000020343 ENSHGLG00000004389 #8 ENSHGLG00000038262 PPP1R3G (ENSHGLG00000041006) #10 ENSHGLG00000040678 #9 RPP40 (ENSHGLG00000004871) #11 ENSHGLG00000005262 #12 ENSHGLG00000038867 ECI2 (ENSHGLG00000005614) #13 PRPF4B (ENSHGLG00000005945) #17 FAM50B (ENSHGLG00000006289) #18 PXDC1 (ENSHGLG00000006650) #19 SLC22A23 (ENSHGLG00000007033) #20 ENSHGLG00000007366 TUBB2B (ENSHGLG00000007696) #22 ENSHGLG00000043950 #22 BPHL (ENSHGLG00000008018) #24 RIPK1 (ENSHGLG00000008330) #25 ENSHGLG00000045779 #26 SERPINB6 (ENSHGLG00000015274) #27 ENSHGLG00000017487 #31 SERPINB1 (ENSHGLG00000032738) #35 WRNIP1 (ENSHGLG00000014216) #36 ENSHGLG00000040911 ENSHGLG00000014288 ENSHGLG00000033368 GMDS (ENSHGLG00000014454) FOXC1 (ENSHGLG00000040750) FOXF2 (ENSHGLG00000007914) FOXQ1 (ENSHGLG00000007951) Naked mole-rat female MODERN SPECIES 28 ENSHGLG00000020343 ENSHGLG00000004389 #8 ENSHGLG00000038262 PPP1R3G (ENSHGLG00000041006) #10 ENSHGLG00000040678 #9 RPP40 (ENSHGLG00000004871) #11 ENSHGLG00000005262 #12 ENSHGLG00000038867 ECI2 (ENSHGLG00000005614) #13 PRPF4B (ENSHGLG00000005945) #17 FAM50B (ENSHGLG00000006289) #18 PXDC1 (ENSHGLG00000006650) #19 SLC22A23 (ENSHGLG00000007033) #20 ENSHGLG00000007366 TUBB2B (ENSHGLG00000007696) #22 ENSHGLG00000043950 #22 BPHL (ENSHGLG00000008018) #24 RIPK1 (ENSHGLG00000008330) #25 ENSHGLG00000045779 #26 SERPINB6 (ENSHGLG00000015274) #27 ENSHGLG00000017487 #31 SERPINB1 (ENSHGLG00000032738) #35 WRNIP1 (ENSHGLG00000014216) #36 ENSHGLG00000040911 ENSHGLG00000014288 ENSHGLG00000033368 GMDS (ENSHGLG00000014454) FOXC1 (ENSHGLG00000040750) FOXF2 (ENSHGLG00000007914) FOXQ1 (ENSHGLG00000007951) ENSHGLG00000044630 Hystricomorpha_a ANCESTRAL SPECIES 48 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B.b #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 ENSGT01100000263474.a.b.b.f Guinea pig MODERN SPECIES 38 SSR1 (ENSCPOG00000039953) RREB1 (ENSCPOG00000014380) LY86 (ENSCPOG00000012001) F13A1 (ENSCPOG00000005276) NRN1 (ENSCPOG00000021547) #7 FARS2 (ENSCPOG00000003994) #8 LYRM4 (ENSCPOG00000038899) #9 RPP40 (ENSCPOG00000005855) #11 CDYL (ENSCPOG00000005847) #12 ECI2 (ENSCPOG00000004788) #13 PRPF4B (ENSCPOG00000004775) #17 FAM50B (ENSCPOG00000000148) #18 PXDC1 (ENSCPOG00000038768) #19 SLC22A23 (ENSCPOG00000010470) #20 PSMG4 (ENSCPOG00000026747) #21 TUBB2B (ENSCPOG00000039814) #22 BPHL (ENSCPOG00000036729) #24 RIPK1 (ENSCPOG00000005195) #25 NQO2 (ENSCPOG00000033205) #26 SERPINB6 (ENSCPOG00000008254) #27 ENSCPOG00000024499 #31 ENSCPOG00000040114 #31 ENSCPOG00000037377 #31 ENSCPOG00000021276 #31 ENSCPOG00000030607 #31 Hystricomorpha_b ANCESTRAL SPECIES 58 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000170978 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931.d #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Degu DUPLICATION Degu MODERN SPECIES 61 ENSODEG00000010547 PLEKHH2 (ENSODEG00000012982) DYNC2LI1 (ENSODEG00000011054) ABCG5 (ENSODEG00000010535) ABCG8 (ENSODEG00000012555) LRPPRC (ENSODEG00000011211) ENSODEG00000019947 ENSODEG00000020039 ENSODEG00000011737 PPM1B (ENSODEG00000012106) SLC3A1 (ENSODEG00000011768) PREPL (ENSODEG00000012834) ENSODEG00000019894 ENSODEG00000019899 CAMKMT (ENSODEG00000013111) ENSODEG00000019927 #22 ENSODEG00000019924 SIX3 (ENSODEG00000011611) SIX2 (ENSODEG00000011970) ENSODEG00000012336 SRBD1 (ENSODEG00000012095) PRKCE (ENSODEG00000011779) EPAS1 (ENSODEG00000011675) RHOQ (ENSODEG00000012565) ENSODEG00000013963 ENSODEG00000011714 SOCS5 (ENSODEG00000019978) ENSODEG00000011724 TTC7A (ENSODEG00000011584) STPG4 (ENSODEG00000012221) CALM2 (ENSODEG00000013273) Degu MODERN SPECIES 64 NRN1 (ENSODEG00000006426) #7 FARS2 (ENSODEG00000006881) #8 ENSODEG00000019555 LYRM4 (ENSODEG00000005678) #9 ENSODEG00000006170 #11 CDYL (ENSODEG00000006073) #12 ENSODEG00000019345 ECI2 (ENSODEG00000007068) #13 FAM217A (ENSODEG00000006489) #16 PRPF4B (ENSODEG00000006156) #17 PXDC1 (ENSODEG00000006864) #19 SLC22A23 (ENSODEG00000007173) #20 PSMG4 (ENSODEG00000006109) #21 ENSODEG00000006987 #22 ENSODEG00000006037 TUBB2A (ENSODEG00000006689) #22 BPHL (ENSODEG00000008397) #24 RIPK1 (ENSODEG00000007668) #25 NQO2 (ENSODEG00000006400) #26 SERPINB6 (ENSODEG00000008291) #27 ENSODEG00000006244 #31 ENSODEG00000006648 ENSODEG00000006906 #31 SERPINB1 (ENSODEG00000010241) #35 WRNIP1 (ENSODEG00000006805) #36 MYLK4 (ENSODEG00000006897) GMDS (ENSODEG00000009960) ENSODEG00000007557 FOXC1 (ENSODEG00000006912) FOXF2 (ENSODEG00000007607) EXOC2 (ENSODEG00000006797) Degu DUPLICATION Degu MODERN SPECIES 64 LY86 (ENSODEG00000005843) F13A1 (ENSODEG00000006301) NRN1 (ENSODEG00000006426) #7 FARS2 (ENSODEG00000006881) #8 ENSODEG00000019555 LYRM4 (ENSODEG00000005678) #9 ENSODEG00000006170 #11 CDYL (ENSODEG00000006073) #12 ENSODEG00000019345 ECI2 (ENSODEG00000007068) #13 FAM217A (ENSODEG00000006489) #16 PRPF4B (ENSODEG00000006156) #17 PXDC1 (ENSODEG00000006864) #19 SLC22A23 (ENSODEG00000007173) #20 PSMG4 (ENSODEG00000006109) #21 ENSODEG00000006987 #22 ENSODEG00000006037 TUBB2A (ENSODEG00000006689) #22 BPHL (ENSODEG00000008397) #24 RIPK1 (ENSODEG00000007668) #25 NQO2 (ENSODEG00000006400) #26 SERPINB6 (ENSODEG00000008291) #27 ENSODEG00000006244 #31 ENSODEG00000006648 ENSODEG00000006906 #31 SERPINB1 (ENSODEG00000010241) #35 WRNIP1 (ENSODEG00000006805) #36 MYLK4 (ENSODEG00000006897) GMDS (ENSODEG00000009960) ENSODEG00000007557 FOXC1 (ENSODEG00000006912) Degu MODERN SPECIES 62 HSCB (ENSODEG00000017352) XBP1 (ENSODEG00000017362) ZNRF3 (ENSODEG00000017168) KREMEN1 (ENSODEG00000017265) ENSODEG00000020526 EMID1 (ENSODEG00000017465) ENSODEG00000017244 RHBDD3 (ENSODEG00000017373) ENSODEG00000017496 GAS2L1 (ENSODEG00000017194) RASL10A (ENSODEG00000017393) AP1B1 (ENSODEG00000017338) NEFH (ENSODEG00000017433) ENSODEG00000017650 NIPSNAP1 (ENSODEG00000017189) ENSODEG00000017494 #22 NF2 (ENSODEG00000017517) CABP7 (ENSODEG00000017415) ZMAT5 (ENSODEG00000017389) ENSODEG00000017651 ASCC2 (ENSODEG00000017546) ENSODEG00000017520 ENSODEG00000017459 KIF21A (ENSODEG00000017431) ENSODEG00000017452 CPNE8 (ENSODEG00000017711) ENSODEG00000020455 ENSODEG00000017594 SYT10 (ENSODEG00000017446) Long-tailed chinchilla DUPLICATION Long-tailed chinchilla MODERN SPECIES 172 LY86 (ENSCLAG00000002671) F13A1 (ENSCLAG00000003000) NRN1 (ENSCLAG00000011260) #7 FARS2 (ENSCLAG00000017316) #8 ENSCLAG00000011017 PPP1R3G (ENSCLAG00000012673) #10 RPP40 (ENSCLAG00000003235) #11 CDYL (ENSCLAG00000003356) #12 ECI2 (ENSCLAG00000003560) #13 ENSCLAG00000003863 #15 FAM217A (ENSCLAG00000004051) #16 PRPF4B (ENSCLAG00000004201) #17 PXDC1 (ENSCLAG00000002715) #19 SLC22A23 (ENSCLAG00000002845) #20 PSMG4 (ENSCLAG00000003148) #21 TUBB2B (ENSCLAG00000003177) #22 BPHL (ENSCLAG00000003241) #24 ENSCLAG00000003326 #22 RIPK1 (ENSCLAG00000002300) #25 NQO2 (ENSCLAG00000002417) #26 SERPINB6 (ENSCLAG00000002474) #27 ENSCLAG00000002657 #31 ENSCLAG00000002501 #31 ENSCLAG00000007069 #31 ENSCLAG00000007653 #31 SERPINB1 (ENSCLAG00000008637) #35 WRNIP1 (ENSCLAG00000006960) #36 MYLK4 (ENSCLAG00000007226) GMDS (ENSCLAG00000002602) FOXF2 (ENSCLAG00000002746) EXOC2 (ENSCLAG00000003072) Long-tailed chinchilla MODERN SPECIES 172 NRN1 (ENSCLAG00000011260) #7 FARS2 (ENSCLAG00000017316) #8 ENSCLAG00000011017 PPP1R3G (ENSCLAG00000012673) #10 RPP40 (ENSCLAG00000003235) #11 CDYL (ENSCLAG00000003356) #12 ECI2 (ENSCLAG00000003560) #13 ENSCLAG00000003863 #15 FAM217A (ENSCLAG00000004051) #16 PRPF4B (ENSCLAG00000004201) #17 PXDC1 (ENSCLAG00000002715) #19 SLC22A23 (ENSCLAG00000002845) #20 PSMG4 (ENSCLAG00000003148) #21 TUBB2B (ENSCLAG00000003177) #22 BPHL (ENSCLAG00000003241) #24 ENSCLAG00000003326 #22 RIPK1 (ENSCLAG00000002300) #25 NQO2 (ENSCLAG00000002417) #26 SERPINB6 (ENSCLAG00000002474) #27 ENSCLAG00000002657 #31 ENSCLAG00000002501 #31 ENSCLAG00000007069 #31 ENSCLAG00000007653 #31 SERPINB1 (ENSCLAG00000008637) #35 WRNIP1 (ENSCLAG00000006960) #36 MYLK4 (ENSCLAG00000007226) GMDS (ENSCLAG00000002602) FOXF2 (ENSCLAG00000002746) EXOC2 (ENSCLAG00000003072) IRF4 (ENSCLAG00000004136) DUSP22 (ENSCLAG00000004363) Lagomorpha ANCESTRAL SPECIES 58 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.h ##27 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 Rabbit MODERN SPECIES 448 NRN1 (ENSOCUG00000008677) #7 FARS2 (ENSOCUG00000014165) #8 LYRM4 (ENSOCUG00000023362) #9 CDYL (ENSOCUG00000004407) #12 RPP40 (ENSOCUG00000000354) #11 ENSOCUG00000030173 ENSOCUG00000032771 ENSOCUG00000016155 #13 ENSOCUG00000016148 #15 FAM217A (ENSOCUG00000016142) #16 PRPF4B (ENSOCUG00000000425) #17 FAM50B (ENSOCUG00000003308) #18 PXDC1 (ENSOCUG00000021247) #19 SLC22A23 (ENSOCUG00000010469) #20 ENSOCUG00000010464 #21 TUBB2B (ENSOCUG00000009827) #22 BPHL (ENSOCUG00000009825) #24 RIPK1 (ENSOCUG00000011791) #25 NQO2 (ENSOCUG00000016499) #26 ENSOCUG00000006216 ##27 SERPINB9 (ENSOCUG00000005091) #31 ENSOCUG00000005088 #35 WRNIP1 (ENSOCUG00000005081) #36 ENSOCUG00000005076 GMDS (ENSOCUG00000015142) Pika DUPLICATION Pika MODERN SPECIES 1475 TUBB2B (ENSOPRG00000000403) #22 TUBB2A (ENSOPRG00000000400) #22 ENSOPRG00000000393 #24 Pika MODERN SPECIES 1475 TUBB2B (ENSOPRG00000000403) #22 TUBB2A (ENSOPRG00000000400) #22 ENSOPRG00000000393 #24 Tree shrew DUPLICATION Tree shrew MODERN SPECIES 1075 ENSTBEG00000004854 #22 ENSTBEG00000004015 #22 ENSTBEG00000003715 Tree shrew MODERN SPECIES 1075 ENSTBEG00000004854 #22 ENSTBEG00000004015 #22 ENSTBEG00000003715 Primates ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Strepsirrhini ANCESTRAL SPECIES 29 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT01000000214902 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Bushbaby DUPLICATION Bushbaby MODERN SPECIES 141 NRN1 (ENSOGAG00000027827) #7 FARS2 (ENSOGAG00000001040) #8 ENSOGAG00000015193 PPP1R3G (ENSOGAG00000034237) #10 RPP40 (ENSOGAG00000006055) #11 ENSOGAG00000015920 #12 ECI2 (ENSOGAG00000011635) #13 ENSOGAG00000011631 #15 FAM217A (ENSOGAG00000011629) #16 PRPF4B (ENSOGAG00000033081) #17 FAM50B (ENSOGAG00000016493) #18 PXDC1 (ENSOGAG00000016490) #19 SLC22A23 (ENSOGAG00000003183) #20 ENSOGAG00000027336 #21 TUBB2B (ENSOGAG00000032955) #22 ENSOGAG00000007496 #22 BPHL (ENSOGAG00000007494) #24 RIPK1 (ENSOGAG00000007491) #25 NQO2 (ENSOGAG00000029985) #26 SERPINB6 (ENSOGAG00000028420) #27 SERPINB9 (ENSOGAG00000029897) #31 ENSOGAG00000002491 #35 Bushbaby MODERN SPECIES 141 F13A1 (ENSOGAG00000001042) NRN1 (ENSOGAG00000027827) #7 FARS2 (ENSOGAG00000001040) #8 ENSOGAG00000015193 PPP1R3G (ENSOGAG00000034237) #10 RPP40 (ENSOGAG00000006055) #11 ENSOGAG00000015920 #12 ECI2 (ENSOGAG00000011635) #13 ENSOGAG00000011631 #15 FAM217A (ENSOGAG00000011629) #16 PRPF4B (ENSOGAG00000033081) #17 FAM50B (ENSOGAG00000016493) #18 PXDC1 (ENSOGAG00000016490) #19 SLC22A23 (ENSOGAG00000003183) #20 ENSOGAG00000027336 #21 TUBB2B (ENSOGAG00000032955) #22 ENSOGAG00000007496 #22 BPHL (ENSOGAG00000007494) #24 RIPK1 (ENSOGAG00000007491) #25 NQO2 (ENSOGAG00000029985) #26 SERPINB6 (ENSOGAG00000028420) #27 SERPINB9 (ENSOGAG00000029897) #31 ENSOGAG00000002491 #35 Lemuriformes ANCESTRAL SPECIES 63 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Lemuriformes_a ANCESTRAL SPECIES 166 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155105 #13 ENSGT00940000168960 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Greater bamboo lemur MODERN SPECIES 610 ENSPSMG00000020920 ECI2 (ENSPSMG00000020985) #13 ENSPSMG00000020994 #15 FAM217A (ENSPSMG00000021011) #16 PRPF4B (ENSPSMG00000021046) #17 FAM50B (ENSPSMG00000021061) #18 PXDC1 (ENSPSMG00000021073) #19 SLC22A23 (ENSPSMG00000021123) #20 PSMG4 (ENSPSMG00000021142) #21 ENSPSMG00000021152 #22 Coquerels sifaka DUPLICATION Coquerels sifaka MODERN SPECIES 497 SLC22A23 (ENSPCOG00000007966) #20 PSMG4 (ENSPCOG00000014849) #21 ENSPCOG00000020515 #22 TUBB2B (ENSPCOG00000015941) #22 BPHL (ENSPCOG00000020939) #24 RIPK1 (ENSPCOG00000024336) #25 NQO2 (ENSPCOG00000017951) #26 SERPINB6 (ENSPCOG00000019023) #27 SERPINB9 (ENSPCOG00000025594) #31 SERPINB1 (ENSPCOG00000003266) #35 WRNIP1 (ENSPCOG00000017172) #36 ENSPCOG00000020178 MYLK4 (ENSPCOG00000026431) ENSPCOG00000019865 GMDS (ENSPCOG00000028639) FOXC1 (ENSPCOG00000026920) FOXF2 (ENSPCOG00000022131) Coquerels sifaka MODERN SPECIES 497 SLC22A23 (ENSPCOG00000007966) #20 PSMG4 (ENSPCOG00000014849) #21 ENSPCOG00000020515 #22 TUBB2B (ENSPCOG00000015941) #22 BPHL (ENSPCOG00000020939) #24 RIPK1 (ENSPCOG00000024336) #25 NQO2 (ENSPCOG00000017951) #26 SERPINB6 (ENSPCOG00000019023) #27 SERPINB9 (ENSPCOG00000025594) #31 SERPINB1 (ENSPCOG00000003266) #35 WRNIP1 (ENSPCOG00000017172) #36 ENSPCOG00000020178 MYLK4 (ENSPCOG00000026431) ENSPCOG00000019865 GMDS (ENSPCOG00000028639) FOXC1 (ENSPCOG00000026920) FOXF2 (ENSPCOG00000022131) Mouse lemur DUPLICATION Mouse lemur MODERN SPECIES 5 RREB1 (ENSMICG00000003683) LY86 (ENSMICG00000016183) F13A1 (ENSMICG00000011731) NRN1 (ENSMICG00000003842) #7 FARS2 (ENSMICG00000003828) #8 LYRM4 (ENSMICG00000028549) #9 RPP40 (ENSMICG00000003297) #11 ENSMICG00000011268 #12 ECI2 (ENSMICG00000007925) #13 ENSMICG00000007923 #15 FAM217A (ENSMICG00000011781) #16 PRPF4B (ENSMICG00000011768) #17 PXDC1 (ENSMICG00000027387) #19 SLC22A23 (ENSMICG00000010664) #20 ENSMICG00000027920 #21 ENSMICG00000000129 #22 TUBB2B (ENSMICG00000010649) #22 ENSMICG00000026983 #22 BPHL (ENSMICG00000010641) #24 RIPK1 (ENSMICG00000010628) #25 NQO2 (ENSMICG00000010625) #26 ENSMICG00000038515 ENSMICG00000041621 SERPINB6 (ENSMICG00000001981) #27 ENSMICG00000033572 SERPINB9 (ENSMICG00000032410) #31 SERPINB1 (ENSMICG00000016870) #35 WRNIP1 (ENSMICG00000031945) #36 MYLK4 (ENSMICG00000031773) GMDS (ENSMICG00000047521) ENSMICG00000030022 Mouse lemur MODERN SPECIES 5 LY86 (ENSMICG00000016183) F13A1 (ENSMICG00000011731) NRN1 (ENSMICG00000003842) #7 FARS2 (ENSMICG00000003828) #8 LYRM4 (ENSMICG00000028549) #9 RPP40 (ENSMICG00000003297) #11 ENSMICG00000011268 #12 ECI2 (ENSMICG00000007925) #13 ENSMICG00000007923 #15 FAM217A (ENSMICG00000011781) #16 PRPF4B (ENSMICG00000011768) #17 PXDC1 (ENSMICG00000027387) #19 SLC22A23 (ENSMICG00000010664) #20 ENSMICG00000027920 #21 ENSMICG00000000129 #22 TUBB2B (ENSMICG00000010649) #22 ENSMICG00000026983 #22 BPHL (ENSMICG00000010641) #24 RIPK1 (ENSMICG00000010628) #25 NQO2 (ENSMICG00000010625) #26 ENSMICG00000038515 ENSMICG00000041621 SERPINB6 (ENSMICG00000001981) #27 ENSMICG00000033572 SERPINB9 (ENSMICG00000032410) #31 SERPINB1 (ENSMICG00000016870) #35 WRNIP1 (ENSMICG00000031945) #36 MYLK4 (ENSMICG00000031773) GMDS (ENSMICG00000047521) ENSMICG00000030022 FOXF2 (ENSMICG00000029665) Mouse lemur MODERN SPECIES 5 F13A1 (ENSMICG00000011731) NRN1 (ENSMICG00000003842) #7 FARS2 (ENSMICG00000003828) #8 LYRM4 (ENSMICG00000028549) #9 RPP40 (ENSMICG00000003297) #11 ENSMICG00000011268 #12 ECI2 (ENSMICG00000007925) #13 ENSMICG00000007923 #15 FAM217A (ENSMICG00000011781) #16 PRPF4B (ENSMICG00000011768) #17 PXDC1 (ENSMICG00000027387) #19 SLC22A23 (ENSMICG00000010664) #20 ENSMICG00000027920 #21 ENSMICG00000000129 #22 TUBB2B (ENSMICG00000010649) #22 ENSMICG00000026983 #22 BPHL (ENSMICG00000010641) #24 RIPK1 (ENSMICG00000010628) #25 NQO2 (ENSMICG00000010625) #26 ENSMICG00000038515 ENSMICG00000041621 SERPINB6 (ENSMICG00000001981) #27 ENSMICG00000033572 SERPINB9 (ENSMICG00000032410) #31 SERPINB1 (ENSMICG00000016870) #35 WRNIP1 (ENSMICG00000031945) #36 MYLK4 (ENSMICG00000031773) GMDS (ENSMICG00000047521) ENSMICG00000030022 FOXF2 (ENSMICG00000029665) ENSMICG00000043294 Haplorrhini ANCESTRAL SPECIES 2 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Simiiformes ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Catarrhini ANCESTRAL SPECIES 5 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00910000147563 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Cercopithecidae ANCESTRAL SPECIES 4 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00910000147563 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Rhinopithecus ANCESTRAL SPECIES 233 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154632.q.a.a.b ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00910000147563 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 Black snub-nosed monkey MODERN SPECIES 1511 RPP40 (ENSRBIG00000035800) #11 CDYL (ENSRBIG00000041073) #12 ENSRBIG00000041293 #13 ENSRBIG00000037967 #15 ENSRBIG00000038999 FAM217A (ENSRBIG00000032885) #16 PRPF4B (ENSRBIG00000033308) #17 ENSRBIG00000043910 FAM50B (ENSRBIG00000005193) #18 ENSRBIG00000030150 PXDC1 (ENSRBIG00000034887) #19 ENSRBIG00000028534 SLC22A23 (ENSRBIG00000033453) #20 PSMG4 (ENSRBIG00000030513) #21 TUBB2B (ENSRBIG00000044962) #22 BPHL (ENSRBIG00000023282) #24 RIPK1 (ENSRBIG00000044016) #25 NQO2 (ENSRBIG00000031353) #26 ENSRBIG00000023655 SERPINB6 (ENSRBIG00000035085) #27 SERPINB9 (ENSRBIG00000044955) #31 SERPINB1 (ENSRBIG00000035002) #35 WRNIP1 (ENSRBIG00000030451) #36 MYLK4 (ENSRBIG00000036683) GMDS (ENSRBIG00000032090) ENSRBIG00000024296 FOXF2 (ENSRBIG00000040570) EXOC2 (ENSRBIG00000000949) HUS1B (ENSRBIG00000029067) XRCC4 (ENSRBIG00000035524) Golden snub-nosed monkey DUPLICATION Golden snub-nosed monkey MODERN SPECIES 985 PXDC1 (ENSRROG00000038805) #19 ENSRROG00000034402 SLC22A23 (ENSRROG00000043800) #20 PSMG4 (ENSRROG00000025040) #21 TUBB2B (ENSRROG00000027371) #22 BPHL (ENSRROG00000024570) #24 RIPK1 (ENSRROG00000035266) #25 NQO2 (ENSRROG00000032281) #26 ENSRROG00000025624 SERPINB6 (ENSRROG00000042629) #27 SERPINB9 (ENSRROG00000029131) #31 SERPINB1 (ENSRROG00000029468) #35 WRNIP1 (ENSRROG00000030448) #36 MYLK4 (ENSRROG00000038081) GMDS (ENSRROG00000030799) Golden snub-nosed monkey MODERN SPECIES 36 ENSRROG00000035069 #22 Cercopithecinae ANCESTRAL SPECIES 6 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a.a.b Vervet Monkey DUPLICATION Vervet Monkey MODERN SPECIES 8 F13A1 (ENSCSAG00000007361) NRN1 (ENSCSAG00000007350) #7 FARS2 (ENSCSAG00000007344) #8 LYRM4 (ENSCSAG00000007314) #9 PPP1R3G (ENSCSAG00000019110) #10 RPP40 (ENSCSAG00000007307) #11 CDYL (ENSCSAG00000007301) #12 ECI2 (ENSCSAG00000007294) #13 ENSCSAG00000007286 #15 FAM217A (ENSCSAG00000007279) #16 PRPF4B (ENSCSAG00000007273) #17 FAM50B (ENSCSAG00000019111) #18 PXDC1 (ENSCSAG00000007263) #19 SLC22A23 (ENSCSAG00000007261) #20 PSMG4 (ENSCSAG00000007253) #21 TUBB2B (ENSCSAG00000007249) #22 TUBB2A (ENSCSAG00000007247) #22 BPHL (ENSCSAG00000007243) #24 RIPK1 (ENSCSAG00000007224) #25 NQO2 (ENSCSAG00000007218) #26 SERPINB6 (ENSCSAG00000007210) #27 SERPINB9 (ENSCSAG00000007207) #31 SERPINB1 (ENSCSAG00000007203) #35 WRNIP1 (ENSCSAG00000007198) #36 MYLK4 (ENSCSAG00000007191) ENSCSAG00000007184 FOXC1 (ENSCSAG00000019112) FOXF2 (ENSCSAG00000007180) FOXQ1 (ENSCSAG00000019113) ENSCSAG00000007177 EXOC2 (ENSCSAG00000007171) Vervet Monkey MODERN SPECIES 8 NRN1 (ENSCSAG00000007350) #7 FARS2 (ENSCSAG00000007344) #8 LYRM4 (ENSCSAG00000007314) #9 PPP1R3G (ENSCSAG00000019110) #10 RPP40 (ENSCSAG00000007307) #11 CDYL (ENSCSAG00000007301) #12 ECI2 (ENSCSAG00000007294) #13 ENSCSAG00000007286 #15 FAM217A (ENSCSAG00000007279) #16 PRPF4B (ENSCSAG00000007273) #17 FAM50B (ENSCSAG00000019111) #18 PXDC1 (ENSCSAG00000007263) #19 SLC22A23 (ENSCSAG00000007261) #20 PSMG4 (ENSCSAG00000007253) #21 TUBB2B (ENSCSAG00000007249) #22 TUBB2A (ENSCSAG00000007247) #22 BPHL (ENSCSAG00000007243) #24 RIPK1 (ENSCSAG00000007224) #25 NQO2 (ENSCSAG00000007218) #26 SERPINB6 (ENSCSAG00000007210) #27 SERPINB9 (ENSCSAG00000007207) #31 SERPINB1 (ENSCSAG00000007203) #35 WRNIP1 (ENSCSAG00000007198) #36 MYLK4 (ENSCSAG00000007191) ENSCSAG00000007184 FOXC1 (ENSCSAG00000019112) FOXF2 (ENSCSAG00000007180) FOXQ1 (ENSCSAG00000019113) ENSCSAG00000007177 EXOC2 (ENSCSAG00000007171) IRF4 (ENSCSAG00000007164) Cercopithecinae_a ANCESTRAL SPECIES 6 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Cercopithecinae_b ANCESTRAL SPECIES 37 ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Olive baboon MODERN SPECIES 16 FARS2 (ENSPANG00000018208) #8 ENSPANG00000023576 ENSPANG00000046029 RPP40 (ENSPANG00000017865) #11 ENSPANG00000045914 CDYL (ENSPANG00000023577) #12 ECI2 (ENSPANG00000025189) #13 ENSPANG00000021758 #15 FAM217A (ENSPANG00000009605) #16 PRPF4B (ENSPANG00000008444) #17 ENSPANG00000039354 FAM50B (ENSPANG00000006202) #18 ENSPANG00000037486 #19 SLC22A23 (ENSPANG00000023485) #20 PSMG4 (ENSPANG00000007366) #21 TUBB2B (ENSPANG00000047634) #22 RIPK1 (ENSPANG00000024400) #25 ENSPANG00000038780 ENSPANG00000033442 NQO2 (ENSPANG00000033064) #26 ENSPANG00000015755 #31 SERPINB1 (ENSPANG00000030460) #35 ENSPANG00000041893 WRNIP1 (ENSPANG00000044052) #36 MYLK4 (ENSPANG00000007409) GMDS (ENSPANG00000020544) FOXC1 (ENSPANG00000011156) FOXF2 (ENSPANG00000044013) FOXQ1 (ENSPANG00000037731) EXOC2 (ENSPANG00000010769) IRF4 (ENSPANG00000023389) Cercopithecinae_d ANCESTRAL SPECIES 41 ENSGT00910000146968 ENSGT00950000183142.a.b.a.b.p ENSGT00910000147352 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Sooty mangabey MODERN SPECIES 247 ECI2 (ENSCATG00000039055) #13 ENSCATG00000034182 ENSCATG00000038905 #15 FAM217A (ENSCATG00000045004) #16 PRPF4B (ENSCATG00000039868) #17 FAM50B (ENSCATG00000019736) #18 PXDC1 (ENSCATG00000034625) #19 SLC22A23 (ENSCATG00000022177) #20 PSMG4 (ENSCATG00000036332) #21 TUBB2B (ENSCATG00000017036) #22 BPHL (ENSCATG00000032656) #24 RIPK1 (ENSCATG00000032918) #25 ENSCATG00000021756 NQO2 (ENSCATG00000027170) #26 SERPINB6 (ENSCATG00000030479) #27 SERPINB1 (ENSCATG00000039910) #35 WRNIP1 (ENSCATG00000041978) #36 MYLK4 (ENSCATG00000036658) ENSCATG00000033597 GMDS (ENSCATG00000039562) ENSCATG00000043623 FOXF2 (ENSCATG00000005462) FOXQ1 (ENSCATG00000017933) HUS1B (ENSCATG00000008071) EXOC2 (ENSCATG00000037603) Drill DUPLICATION Drill MODERN SPECIES 899 ENSMLEG00000030282 ENSMLEG00000034332 ENSMLEG00000041575 RPP40 (ENSMLEG00000040851) #11 CDYL (ENSMLEG00000010888) #12 ECI2 (ENSMLEG00000033204) #13 ENSMLEG00000037689 ENSMLEG00000031291 #15 FAM217A (ENSMLEG00000039857) #16 PRPF4B (ENSMLEG00000030421) #17 ENSMLEG00000021954 FAM50B (ENSMLEG00000005931) #18 PXDC1 (ENSMLEG00000037642) #19 SLC22A23 (ENSMLEG00000029569) #20 PSMG4 (ENSMLEG00000035294) #21 TUBB2B (ENSMLEG00000037972) #22 ENSMLEG00000034009 #22 BPHL (ENSMLEG00000033802) #24 RIPK1 (ENSMLEG00000025829) #25 ENSMLEG00000033411 NQO2 (ENSMLEG00000044409) #26 SERPINB6 (ENSMLEG00000013840) #27 SERPINB9 (ENSMLEG00000028963) #31 SERPINB1 (ENSMLEG00000031662) #35 ENSMLEG00000011844 #36 MYLK4 (ENSMLEG00000043022) ENSMLEG00000041640 ENSMLEG00000044127 ENSMLEG00000027734 ENSMLEG00000019226 EXOC2 (ENSMLEG00000033278) Drill MODERN SPECIES 899 ENSMLEG00000034332 ENSMLEG00000041575 RPP40 (ENSMLEG00000040851) #11 CDYL (ENSMLEG00000010888) #12 ECI2 (ENSMLEG00000033204) #13 ENSMLEG00000037689 ENSMLEG00000031291 #15 FAM217A (ENSMLEG00000039857) #16 PRPF4B (ENSMLEG00000030421) #17 ENSMLEG00000021954 FAM50B (ENSMLEG00000005931) #18 PXDC1 (ENSMLEG00000037642) #19 SLC22A23 (ENSMLEG00000029569) #20 PSMG4 (ENSMLEG00000035294) #21 TUBB2B (ENSMLEG00000037972) #22 ENSMLEG00000034009 #22 BPHL (ENSMLEG00000033802) #24 RIPK1 (ENSMLEG00000025829) #25 ENSMLEG00000033411 NQO2 (ENSMLEG00000044409) #26 SERPINB6 (ENSMLEG00000013840) #27 SERPINB9 (ENSMLEG00000028963) #31 SERPINB1 (ENSMLEG00000031662) #35 ENSMLEG00000011844 #36 MYLK4 (ENSMLEG00000043022) ENSMLEG00000041640 ENSMLEG00000044127 ENSMLEG00000027734 ENSMLEG00000019226 EXOC2 (ENSMLEG00000033278) IRF4 (ENSMLEG00000004768) Macaca ANCESTRAL SPECIES 23 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00940000154632.q.a.a.b ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000154295.y.b.b ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00950000183029.B.c.b.b.b.u.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a.a.b Pig-tailed macaque DUPLICATION Pig-tailed macaque MODERN SPECIES 136 ENSMNEG00000045067 ENSMNEG00000003878 RPP40 (ENSMNEG00000041986) #11 CDYL (ENSMNEG00000038983) #12 ECI2 (ENSMNEG00000000039) #13 ENSMNEG00000034908 ENSMNEG00000020877 #15 FAM217A (ENSMNEG00000035674) #16 PRPF4B (ENSMNEG00000036107) #17 ENSMNEG00000039272 FAM50B (ENSMNEG00000017045) #18 PXDC1 (ENSMNEG00000029513) #19 ENSMNEG00000040334 SLC22A23 (ENSMNEG00000035865) #20 PSMG4 (ENSMNEG00000045254) #21 TUBB2B (ENSMNEG00000000042) #22 ENSMNEG00000030834 #22 BPHL (ENSMNEG00000034992) #24 RIPK1 (ENSMNEG00000029731) #25 ENSMNEG00000030982 NQO2 (ENSMNEG00000039080) #26 SERPINB6 (ENSMNEG00000038077) #27 SERPINB9 (ENSMNEG00000018071) #31 SERPINB1 (ENSMNEG00000031098) #35 WRNIP1 (ENSMNEG00000032509) #36 MYLK4 (ENSMNEG00000033807) ENSMNEG00000035768 ENSMNEG00000036375 GMDS (ENSMNEG00000035111) FOXC1 (ENSMNEG00000006978) Pig-tailed macaque MODERN SPECIES 136 ENSMNEG00000003878 RPP40 (ENSMNEG00000041986) #11 CDYL (ENSMNEG00000038983) #12 ECI2 (ENSMNEG00000000039) #13 ENSMNEG00000034908 ENSMNEG00000020877 #15 FAM217A (ENSMNEG00000035674) #16 PRPF4B (ENSMNEG00000036107) #17 ENSMNEG00000039272 FAM50B (ENSMNEG00000017045) #18 PXDC1 (ENSMNEG00000029513) #19 ENSMNEG00000040334 SLC22A23 (ENSMNEG00000035865) #20 PSMG4 (ENSMNEG00000045254) #21 TUBB2B (ENSMNEG00000000042) #22 ENSMNEG00000030834 #22 BPHL (ENSMNEG00000034992) #24 RIPK1 (ENSMNEG00000029731) #25 ENSMNEG00000030982 NQO2 (ENSMNEG00000039080) #26 SERPINB6 (ENSMNEG00000038077) #27 SERPINB9 (ENSMNEG00000018071) #31 SERPINB1 (ENSMNEG00000031098) #35 WRNIP1 (ENSMNEG00000032509) #36 MYLK4 (ENSMNEG00000033807) ENSMNEG00000035768 ENSMNEG00000036375 GMDS (ENSMNEG00000035111) FOXC1 (ENSMNEG00000006978) Macaca_a ANCESTRAL SPECIES 24 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00910000147352 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Crab-eating macaque MODERN SPECIES 14 F13A1 (ENSMFAG00000001306) NRN1 (ENSMFAG00000062211) #7 FARS2 (ENSMFAG00000043484) #8 ENSMFAG00000002120 #9 ENSMFAG00000054956 RPP40 (ENSMFAG00000043100) #11 CDYL (ENSMFAG00000042478) #12 ENSMFAG00000061853 ECI2 (ENSMFAG00000039175) #13 ENSMFAG00000044085 #15 FAM217A (ENSMFAG00000044867) #16 PRPF4B (ENSMFAG00000018980) #17 PXDC1 (ENSMFAG00000044456) #19 SLC22A23 (ENSMFAG00000034156) #20 PSMG4 (ENSMFAG00000039884) #21 ENSMFAG00000003772 #22 BPHL (ENSMFAG00000041437) #24 RIPK1 (ENSMFAG00000037119) #25 ENSMFAG00000043217 NQO2 (ENSMFAG00000035954) #26 SERPINB6 (ENSMFAG00000043844) #27 SERPINB9 (ENSMFAG00000042251) #31 SERPINB1 (ENSMFAG00000001421) #35 WRNIP1 (ENSMFAG00000001313) #36 MYLK4 (ENSMFAG00000057340) GMDS (ENSMFAG00000031316) FOXF2 (ENSMFAG00000036369) FOXQ1 (ENSMFAG00000062586) EXOC2 (ENSMFAG00000045215) IRF4 (ENSMFAG00000045100) DUSP22 (ENSMFAG00000034531) Rhesus MODERN SPECIES 14 ENSMMUG00000057424 ENSMMUG00000049865 PPP1R3G (ENSMMUG00000061878) #10 RPP40 (ENSMMUG00000004966) #11 CDYL (ENSMMUG00000004964) #12 ENSMMUG00000055619 ENSMMUG00000054791 ECI2 (ENSMMUG00000014021) #13 TEX56P (ENSMMUG00000014020) #15 FAM217A (ENSMMUG00000014019) #16 PRPF4B (ENSMMUG00000014017) #17 FAM50B (ENSMMUG00000039209) #18 PXDC1 (ENSMMUG00000010926) #19 SLC22A23 (ENSMMUG00000001371) #20 PSMG4 (ENSMMUG00000011031) #21 TUBB2B (ENSMMUG00000023785) #22 BPHL (ENSMMUG00000008483) #24 RIPK1 (ENSMMUG00000008485) #25 NQO2 (ENSMMUG00000008487) #26 SERPINB6 (ENSMMUG00000037816) #27 SERPINB9 (ENSMMUG00000011719) #31 SERPINB1 (ENSMMUG00000042368) #35 WRNIP1 (ENSMMUG00000007143) #36 MYLK4 (ENSMMUG00000007144) GMDS (ENSMMUG00000005779) FOXC1 (ENSMMUG00000005778) FOXF2 (ENSMMUG00000004540) FOXQ1 (ENSMMUG00000059043) EXOC2 (ENSMMUG00000023558) IRF4 (ENSMMUG00000018513) DUSP22 (ENSMMUG00000018514) Hominoidea ANCESTRAL SPECIES 4 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #26 ENSGT00910000147563 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Gibbon DUPLICATION Gibbon MODERN SPECIES 23 FARS2 (ENSNLEG00000011479) #8 ENSNLEG00000030412 ENSNLEG00000011472 ENSNLEG00000028872 PPP1R3G (ENSNLEG00000018873) #10 RPP40 (ENSNLEG00000034397) #11 CDYL (ENSNLEG00000011446) #12 ENSNLEG00000031998 ECI2 (ENSNLEG00000011371) #13 ENSNLEG00000011349 #15 ENSNLEG00000011341 #16 PRPF4B (ENSNLEG00000011291) #17 ENSNLEG00000031341 #19 SLC22A23 (ENSNLEG00000011273) #20 ENSNLEG00000011266 #21 TUBB2B (ENSNLEG00000011121) #22 TUBB2A (ENSNLEG00000031860) #22 BPHL (ENSNLEG00000028923) #24 RIPK1 (ENSNLEG00000011075) #25 ENSNLEG00000011073 NQO2 (ENSNLEG00000011051) #26 ENSNLEG00000029196 SERPINB6 (ENSNLEG00000011022) #27 SERPINB9 (ENSNLEG00000031330) #31 SERPINB1 (ENSNLEG00000010958) #35 WRNIP1 (ENSNLEG00000010928) #36 MYLK4 (ENSNLEG00000010906) ENSNLEG00000035231 GMDS (ENSNLEG00000010832) ENSNLEG00000010830 ENSNLEG00000029356 Gibbon MODERN SPECIES 23 ENSNLEG00000030412 ENSNLEG00000011472 ENSNLEG00000028872 PPP1R3G (ENSNLEG00000018873) #10 RPP40 (ENSNLEG00000034397) #11 CDYL (ENSNLEG00000011446) #12 ENSNLEG00000031998 ECI2 (ENSNLEG00000011371) #13 ENSNLEG00000011349 #15 ENSNLEG00000011341 #16 PRPF4B (ENSNLEG00000011291) #17 ENSNLEG00000031341 #19 SLC22A23 (ENSNLEG00000011273) #20 ENSNLEG00000011266 #21 TUBB2B (ENSNLEG00000011121) #22 TUBB2A (ENSNLEG00000031860) #22 BPHL (ENSNLEG00000028923) #24 RIPK1 (ENSNLEG00000011075) #25 ENSNLEG00000011073 NQO2 (ENSNLEG00000011051) #26 ENSNLEG00000029196 SERPINB6 (ENSNLEG00000011022) #27 SERPINB9 (ENSNLEG00000031330) #31 SERPINB1 (ENSNLEG00000010958) #35 WRNIP1 (ENSNLEG00000010928) #36 MYLK4 (ENSNLEG00000010906) ENSNLEG00000035231 GMDS (ENSNLEG00000010832) ENSNLEG00000010830 ENSNLEG00000029356 ENSNLEG00000010829 Hominidae ANCESTRAL SPECIES 5 ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00550000076325 ENSGT00530000063480.b.h ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Orangutan MODERN SPECIES 19 ENSPPYG00000039334 ENSPPYG00000030077 PPP1R3G (ENSPPYG00000040553) #10 RPP40 (ENSPPYG00000016194) #11 ENSPPYG00000016193 CDYL (ENSPPYG00000016192) #12 ENSPPYG00000033633 ECI2 (ENSPPYG00000016190) #13 ENSPPYG00000016189 #15 ENSPPYG00000016188 #16 PRPF4B (ENSPPYG00000016187) #17 FAM50B (ENSPPYG00000016184) #18 PXDC1 (ENSPPYG00000041429) #19 SLC22A23 (ENSPPYG00000016182) #20 ENSPPYG00000016181 #21 TUBB2B (ENSPPYG00000016180) #22 BPHL (ENSPPYG00000016179) #24 RIPK1 (ENSPPYG00000016178) #25 NQO2 (ENSPPYG00000016176) #26 SERPINB6 (ENSPPYG00000016174) #27 SERPINB9 (ENSPPYG00000016173) #31 SERPINB1 (ENSPPYG00000016172) #35 WRNIP1 (ENSPPYG00000041417) #36 MYLK4 (ENSPPYG00000016170) GMDS (ENSPPYG00000016168) FOXC1 (ENSPPYG00000016167) FOXF2 (ENSPPYG00000016166) FOXQ1 (ENSPPYG00000016165) EXOC2 (ENSPPYG00000016162) IRF4 (ENSPPYG00000016161) DUSP22 (ENSPPYG00000016160) Homo/Pan/Gorilla group ANCESTRAL SPECIES 4 ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00550000076325 ENSGT00530000063480.b.h ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Gorilla DUPLICATION Gorilla MODERN SPECIES 19 ENSGGOG00000039934 PPP1R3G (ENSGGOG00000025700) #10 RPP40 (ENSGGOG00000013764) #11 ENSGGOG00000025602 CDYL (ENSGGOG00000022529) #12 ENSGGOG00000024917 ENSGGOG00000042566 ECI2 (ENSGGOG00000006430) #13 ENSGGOG00000023940 #15 ENSGGOG00000034975 #16 PRPF4B (ENSGGOG00000006422) #17 ENSGGOG00000044208 PXDC1 (ENSGGOG00000000462) #19 SLC22A23 (ENSGGOG00000012609) #20 ENSGGOG00000012606 #21 TUBB2B (ENSGGOG00000002310) #22 ENSGGOG00000041508 #22 BPHL (ENSGGOG00000012596) #24 RIPK1 (ENSGGOG00000012589) #25 NQO2 (ENSGGOG00000011077) #26 SERPINB6 (ENSGGOG00000016546) #27 SERPINB9 (ENSGGOG00000038562) #31 SERPINB1 (ENSGGOG00000007770) #35 WRNIP1 (ENSGGOG00000022046) #36 MYLK4 (ENSGGOG00000004856) GMDS (ENSGGOG00000005663) ENSGGOG00000009269 ENSGGOG00000022142 FOXF2 (ENSGGOG00000013479) ENSGGOG00000038740 HUS1B (ENSGGOG00000007415) Gorilla MODERN SPECIES 19 PPP1R3G (ENSGGOG00000025700) #10 RPP40 (ENSGGOG00000013764) #11 ENSGGOG00000025602 CDYL (ENSGGOG00000022529) #12 ENSGGOG00000024917 ENSGGOG00000042566 ECI2 (ENSGGOG00000006430) #13 ENSGGOG00000023940 #15 ENSGGOG00000034975 #16 PRPF4B (ENSGGOG00000006422) #17 ENSGGOG00000044208 PXDC1 (ENSGGOG00000000462) #19 SLC22A23 (ENSGGOG00000012609) #20 ENSGGOG00000012606 #21 TUBB2B (ENSGGOG00000002310) #22 ENSGGOG00000041508 #22 BPHL (ENSGGOG00000012596) #24 RIPK1 (ENSGGOG00000012589) #25 NQO2 (ENSGGOG00000011077) #26 SERPINB6 (ENSGGOG00000016546) #27 SERPINB9 (ENSGGOG00000038562) #31 SERPINB1 (ENSGGOG00000007770) #35 WRNIP1 (ENSGGOG00000022046) #36 MYLK4 (ENSGGOG00000004856) GMDS (ENSGGOG00000005663) ENSGGOG00000009269 ENSGGOG00000022142 FOXF2 (ENSGGOG00000013479) ENSGGOG00000038740 HUS1B (ENSGGOG00000007415) EXOC2 (ENSGGOG00000005415) Homo/Pan group ANCESTRAL SPECIES 5 ENSGT00940000157289.a #9 ENSGT00940000161627.a.a.a.b.b.b.b.b.b ENSGT00910000146968 ENSGT00940000169445 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.t #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Pan ANCESTRAL SPECIES 29 ENSGT00940000169445 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.t #12 ENSGT00550000076325 ENSGT01020000230346.C.c.b.a.b ENSGT00910000147523 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00550000075030.n ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b.c.a.a ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Bonobo MODERN SPECIES 19 PPP1R3G (ENSPPAG00000010105) #10 RPP40 (ENSPPAG00000023703) #11 ENSPPAG00000042882 CDYL (ENSPPAG00000036996) #12 ENSPPAG00000037535 ENSPPAG00000034861 ECI2 (ENSPPAG00000040308) #13 ENSPPAG00000030290 #15 ENSPPAG00000035868 #16 PRPF4B (ENSPPAG00000040144) #17 ENSPPAG00000036576 PXDC1 (ENSPPAG00000032898) #19 SLC22A23 (ENSPPAG00000033292) #20 ENSPPAG00000035910 #21 ENSPPAG00000035950 TUBB2A (ENSPPAG00000034122) #22 BPHL (ENSPPAG00000035074) #24 RIPK1 (ENSPPAG00000027763) #25 NQO2 (ENSPPAG00000016998) #26 SERPINB6 (ENSPPAG00000043993) #27 SERPINB9 (ENSPPAG00000034571) #31 SERPINB1 (ENSPPAG00000041181) #35 WRNIP1 (ENSPPAG00000034495) #36 MYLK4 (ENSPPAG00000035250) ENSPPAG00000022392 GMDS (ENSPPAG00000026874) ENSPPAG00000039651 ENSPPAG00000039358 HUS1B (ENSPPAG00000023178) EXOC2 (ENSPPAG00000029339) IRF4 (ENSPPAG00000040992) Chimpanzee DUPLICATION Chimpanzee MODERN SPECIES 19 PPP1R3G (ENSPTRG00000042254) #10 RPP40 (ENSPTRG00000017690) #11 ENSPTRG00000046429 CDYL (ENSPTRG00000017688) #12 ENSPTRG00000047562 ENSPTRG00000046313 ECI2 (ENSPTRG00000017687) #13 TEX56P (ENSPTRG00000017686) #15 ENSPTRG00000051400 #16 PRPF4B (ENSPTRG00000017683) #17 ENSPTRG00000051344 PXDC1 (ENSPTRG00000017679) #19 SLC22A23 (ENSPTRG00000017678) #20 PSMG4 (ENSPTRG00000033938) #21 ENSPTRG00000050739 #22 ENSPTRG00000048005 #22 ENSPTRG00000044345 #22 BPHL (ENSPTRG00000017673) #24 RIPK1 (ENSPTRG00000017672) #25 ENSPTRG00000048006 NQO2 (ENSPTRG00000017670) #26 SERPINB6 (ENSPTRG00000017669) #27 SERPINB9 (ENSPTRG00000017668) #31 SERPINB1 (ENSPTRG00000017667) #35 WRNIP1 (ENSPTRG00000017666) #36 MYLK4 (ENSPTRG00000017665) ENSPTRG00000047752 GMDS (ENSPTRG00000017663) FOXC1 (ENSPTRG00000051406) ENSPTRG00000046603 FOXF2 (ENSPTRG00000017662) Chimpanzee MODERN SPECIES 19 ENSPTRG00000045800 PPP1R3G (ENSPTRG00000042254) #10 RPP40 (ENSPTRG00000017690) #11 ENSPTRG00000046429 CDYL (ENSPTRG00000017688) #12 ENSPTRG00000047562 ENSPTRG00000046313 ECI2 (ENSPTRG00000017687) #13 TEX56P (ENSPTRG00000017686) #15 ENSPTRG00000051400 #16 PRPF4B (ENSPTRG00000017683) #17 ENSPTRG00000051344 PXDC1 (ENSPTRG00000017679) #19 SLC22A23 (ENSPTRG00000017678) #20 PSMG4 (ENSPTRG00000033938) #21 ENSPTRG00000050739 #22 ENSPTRG00000048005 #22 ENSPTRG00000044345 #22 BPHL (ENSPTRG00000017673) #24 RIPK1 (ENSPTRG00000017672) #25 ENSPTRG00000048006 NQO2 (ENSPTRG00000017670) #26 SERPINB6 (ENSPTRG00000017669) #27 SERPINB9 (ENSPTRG00000017668) #31 SERPINB1 (ENSPTRG00000017667) #35 WRNIP1 (ENSPTRG00000017666) #36 MYLK4 (ENSPTRG00000017665) ENSPTRG00000047752 GMDS (ENSPTRG00000017663) FOXC1 (ENSPTRG00000051406) ENSPTRG00000046603 Chimpanzee MODERN SPECIES 19 RPP40 (ENSPTRG00000017690) #11 ENSPTRG00000046429 CDYL (ENSPTRG00000017688) #12 ENSPTRG00000047562 ENSPTRG00000046313 ECI2 (ENSPTRG00000017687) #13 TEX56P (ENSPTRG00000017686) #15 ENSPTRG00000051400 #16 PRPF4B (ENSPTRG00000017683) #17 ENSPTRG00000051344 PXDC1 (ENSPTRG00000017679) #19 SLC22A23 (ENSPTRG00000017678) #20 PSMG4 (ENSPTRG00000033938) #21 ENSPTRG00000050739 #22 ENSPTRG00000048005 #22 ENSPTRG00000044345 #22 BPHL (ENSPTRG00000017673) #24 RIPK1 (ENSPTRG00000017672) #25 ENSPTRG00000048006 NQO2 (ENSPTRG00000017670) #26 SERPINB6 (ENSPTRG00000017669) #27 SERPINB9 (ENSPTRG00000017668) #31 SERPINB1 (ENSPTRG00000017667) #35 WRNIP1 (ENSPTRG00000017666) #36 MYLK4 (ENSPTRG00000017665) ENSPTRG00000047752 GMDS (ENSPTRG00000017663) FOXC1 (ENSPTRG00000051406) ENSPTRG00000046603 FOXF2 (ENSPTRG00000017662) FOXQ1 (ENSPTRG00000029883) Human DUPLICATION Human MODERN SPECIES 18 LY86 (ENSG00000112799) F13A1 (ENSG00000124491) NRN1 (ENSG00000124785) #7 FARS2 (ENSG00000145982) #8 LYRM4 (ENSG00000214113) #9 PPP1R3G (ENSG00000219607) #10 RPP40 (ENSG00000124787) #11 CDYL (ENSG00000153046) #12 ECI2 (ENSG00000198721) #13 FAM217A (ENSG00000145975) #16 PRPF4B (ENSG00000112739) #17 FAM50B (ENSG00000145945) #18 PXDC1 (ENSG00000168994) #19 SLC22A23 (ENSG00000137266) #20 PSMG4 (ENSG00000180822) #21 TUBB2B (ENSG00000137285) #22 TUBB2A (ENSG00000137267) #22 BPHL (ENSG00000137274) #24 RIPK1 (ENSG00000137275) #25 NQO2 (ENSG00000124588) #26 SERPINB6 (ENSG00000124570) #27 SERPINB9 (ENSG00000170542) #31 SERPINB1 (ENSG00000021355) #35 WRNIP1 (ENSG00000124535) #36 MYLK4 (ENSG00000145949) GMDS (ENSG00000112699) FOXC1 (ENSG00000054598) FOXF2 (ENSG00000137273) FOXQ1 (ENSG00000164379) HUS1B (ENSG00000188996) EXOC2 (ENSG00000112685) Human MODERN SPECIES 18 F13A1 (ENSG00000124491) NRN1 (ENSG00000124785) #7 FARS2 (ENSG00000145982) #8 LYRM4 (ENSG00000214113) #9 PPP1R3G (ENSG00000219607) #10 RPP40 (ENSG00000124787) #11 CDYL (ENSG00000153046) #12 ECI2 (ENSG00000198721) #13 FAM217A (ENSG00000145975) #16 PRPF4B (ENSG00000112739) #17 FAM50B (ENSG00000145945) #18 PXDC1 (ENSG00000168994) #19 SLC22A23 (ENSG00000137266) #20 PSMG4 (ENSG00000180822) #21 TUBB2B (ENSG00000137285) #22 TUBB2A (ENSG00000137267) #22 BPHL (ENSG00000137274) #24 RIPK1 (ENSG00000137275) #25 NQO2 (ENSG00000124588) #26 SERPINB6 (ENSG00000124570) #27 SERPINB9 (ENSG00000170542) #31 SERPINB1 (ENSG00000021355) #35 WRNIP1 (ENSG00000124535) #36 MYLK4 (ENSG00000145949) GMDS (ENSG00000112699) FOXC1 (ENSG00000054598) FOXF2 (ENSG00000137273) FOXQ1 (ENSG00000164379) HUS1B (ENSG00000188996) EXOC2 (ENSG00000112685) IRF4 (ENSG00000137265) Platyrrhini ANCESTRAL SPECIES 34 ENSGT00940000158071 #8 ENSGT00940000157289.a.a.b #9 ENSGT00940000157289.a.a.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209.f #19 ENSGT00390000009209.e.a #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746.c.a #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a Cebidae ANCESTRAL SPECIES 33 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a.a.b #9 ENSGT00940000157289.a.a.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209.e.a #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746.c.a #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000154953 ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00390000001231.s.a Marmoset MODERN SPECIES 16 NRN1 (ENSCJAG00000084548) #7 FARS2 (ENSCJAG00000021369) #8 ENSCJAG00000021370 #9 ENSCJAG00000069228 PPP1R3G (ENSCJAG00000021371) #10 RPP40 (ENSCJAG00000021373) #11 CDYL (ENSCJAG00000021374) #12 ECI2 (ENSCJAG00000021377) #13 ENSCJAG00000040689 #15 FAM217A (ENSCJAG00000021382) #16 PRPF4B (ENSCJAG00000021385) #17 FAM50B (ENSCJAG00000017601) #18 PXDC1 (ENSCJAG00000017603) #19 SLC22A23 (ENSCJAG00000017606) #20 ENSCJAG00000017623 #21 TUBB2B (ENSCJAG00000045954) #22 ENSCJAG00000017700 #24 RIPK1 (ENSCJAG00000017707) #25 NQO2 (ENSCJAG00000017717) #26 ENSCJAG00000070954 ENSCJAG00000086827 ENSCJAG00000073772 ENSCJAG00000052093 ENSCJAG00000085203 ENSCJAG00000070049 ENSCJAG00000066289 ENSCJAG00000072237 ENSCJAG00000032252 ENSCJAG00000074016 ENSCJAG00000010562 #27 SERPINB9 (ENSCJAG00000042376) #31 Cebidae_a ANCESTRAL SPECIES 42 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a.a.b #9 ENSGT00910000146968 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209.e.a #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746.c.a #24 ENSGT00940000159347 #25 ENSGT00390000006707.w.b ENSGT00940000156563 #26 ENSGT00940000154519.g.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000154953 ENSGT00940000162527 ENSGT00390000010872 ENSGT00390000001231.s.a.d ENSGT00940000159059 Bolivian squirrel monkey MODERN SPECIES 64 NRN1 (ENSSBOG00000016661) #7 FARS2 (ENSSBOG00000025432) #8 ENSSBOG00000033795 #9 ENSSBOG00000029411 RPP40 (ENSSBOG00000020297) #11 CDYL (ENSSBOG00000034197) #12 ECI2 (ENSSBOG00000021463) #13 ENSSBOG00000022307 #15 FAM217A (ENSSBOG00000029826) #16 PRPF4B (ENSSBOG00000014617) #17 ENSSBOG00000013265 FAM50B (ENSSBOG00000036113) #18 PXDC1 (ENSSBOG00000000499) #19 SLC22A23 (ENSSBOG00000026574) #20 ENSSBOG00000033676 TUBB2A (ENSSBOG00000023452) #22 ENSSBOG00000032695 #24 RIPK1 (ENSSBOG00000029217) #25 NQO2 (ENSSBOG00000028797) #26 SERPINB6 (ENSSBOG00000019279) #27 SERPINB9 (ENSSBOG00000028507) #31 SERPINB1 (ENSSBOG00000024614) #35 WRNIP1 (ENSSBOG00000025057) #36 MYLK4 (ENSSBOG00000026264) GMDS (ENSSBOG00000023900) FOXF2 (ENSSBOG00000030093) EXOC2 (ENSSBOG00000023371) IRF4 (ENSSBOG00000034798) ENSSBOG00000024591 DUSP22 (ENSSBOG00000033220) ENSSBOG00000022277 Capuchin DUPLICATION Capuchin MODERN SPECIES 231 ENSCCAG00000017866 ENSCCAG00000018328 GTF3C6 (ENSCCAG00000029714) RPF2 (ENSCCAG00000030864) ENSCCAG00000037609 SLC16A10 (ENSCCAG00000020583) ENSCCAG00000005460 MFSD4B (ENSCCAG00000027584) ENSCCAG00000024842 ENSCCAG00000027786 #15 FAM217A (ENSCCAG00000014228) #16 PRPF4B (ENSCCAG00000001770) #17 PXDC1 (ENSCCAG00000029262) #19 SLC22A23 (ENSCCAG00000019171) #20 PSMG4 (ENSCCAG00000025375) #21 TUBB2B (ENSCCAG00000003095) #22 ENSCCAG00000032435 #22 ENSCCAG00000024163 #24 RIPK1 (ENSCCAG00000030822) #25 ENSCCAG00000036205 NQO2 (ENSCCAG00000032987) #26 SERPINB6 (ENSCCAG00000034114) #27 SERPINB9 (ENSCCAG00000037402) #31 SERPINB1 (ENSCCAG00000037553) #35 WRNIP1 (ENSCCAG00000030869) #36 MYLK4 (ENSCCAG00000023264) GMDS (ENSCCAG00000021064) ENSCCAG00000034696 FOXF2 (ENSCCAG00000033175) Capuchin MODERN SPECIES 231 ENSCCAG00000018328 GTF3C6 (ENSCCAG00000029714) RPF2 (ENSCCAG00000030864) ENSCCAG00000037609 SLC16A10 (ENSCCAG00000020583) ENSCCAG00000005460 MFSD4B (ENSCCAG00000027584) ENSCCAG00000024842 ENSCCAG00000027786 #15 FAM217A (ENSCCAG00000014228) #16 PRPF4B (ENSCCAG00000001770) #17 PXDC1 (ENSCCAG00000029262) #19 SLC22A23 (ENSCCAG00000019171) #20 PSMG4 (ENSCCAG00000025375) #21 TUBB2B (ENSCCAG00000003095) #22 ENSCCAG00000032435 #22 ENSCCAG00000024163 #24 RIPK1 (ENSCCAG00000030822) #25 ENSCCAG00000036205 NQO2 (ENSCCAG00000032987) #26 SERPINB6 (ENSCCAG00000034114) #27 SERPINB9 (ENSCCAG00000037402) #31 SERPINB1 (ENSCCAG00000037553) #35 WRNIP1 (ENSCCAG00000030869) #36 MYLK4 (ENSCCAG00000023264) GMDS (ENSCCAG00000021064) ENSCCAG00000034696 FOXF2 (ENSCCAG00000033175) Mas night monkey DUPLICATION Mas night monkey MODERN SPECIES 638 F13A1 (ENSANAG00000035239) NRN1 (ENSANAG00000026127) #7 FARS2 (ENSANAG00000019047) #8 ENSANAG00000033127 LYRM4 (ENSANAG00000024664) #9 RPP40 (ENSANAG00000029246) #11 CDYL (ENSANAG00000023827) #12 ECI2 (ENSANAG00000028772) #13 ENSANAG00000030717 #15 FAM217A (ENSANAG00000004744) #16 PRPF4B (ENSANAG00000021606) #17 FAM50B (ENSANAG00000031334) #18 ENSANAG00000021015 #19 SLC22A23 (ENSANAG00000023717) #20 PSMG4 (ENSANAG00000032191) #21 TUBB2B (ENSANAG00000036086) #22 TUBB2A (ENSANAG00000030561) #22 ENSANAG00000020303 #24 RIPK1 (ENSANAG00000033311) #25 ENSANAG00000007502 NQO2 (ENSANAG00000033860) #26 Mas night monkey MODERN SPECIES 638 NRN1 (ENSANAG00000026127) #7 FARS2 (ENSANAG00000019047) #8 ENSANAG00000033127 LYRM4 (ENSANAG00000024664) #9 RPP40 (ENSANAG00000029246) #11 CDYL (ENSANAG00000023827) #12 ECI2 (ENSANAG00000028772) #13 ENSANAG00000030717 #15 FAM217A (ENSANAG00000004744) #16 PRPF4B (ENSANAG00000021606) #17 FAM50B (ENSANAG00000031334) #18 ENSANAG00000021015 #19 SLC22A23 (ENSANAG00000023717) #20 PSMG4 (ENSANAG00000032191) #21 TUBB2B (ENSANAG00000036086) #22 TUBB2A (ENSANAG00000030561) #22 ENSANAG00000020303 #24 RIPK1 (ENSANAG00000033311) #25 ENSANAG00000007502 NQO2 (ENSANAG00000033860) #26 Tarsier DUPLICATION Tarsier MODERN SPECIES 6444 PXDC1 (ENSTSYG00000027082) #19 SLC22A23 (ENSTSYG00000000070) #20 PSMG4 (ENSTSYG00000035888) #21 TUBB2B (ENSTSYG00000037166) #22 TUBB2A (ENSTSYG00000012371) #22 BPHL (ENSTSYG00000011270) #24 RIPK1 (ENSTSYG00000011192) #25 NQO2 (ENSTSYG00000003832) #26 SERPINB6 (ENSTSYG00000035626) #27 SERPINB9 (ENSTSYG00000003659) #31 Tarsier MODERN SPECIES 6444 PXDC1 (ENSTSYG00000027082) #19 SLC22A23 (ENSTSYG00000000070) #20 PSMG4 (ENSTSYG00000035888) #21 TUBB2B (ENSTSYG00000037166) #22 TUBB2A (ENSTSYG00000012371) #22 BPHL (ENSTSYG00000011270) #24 RIPK1 (ENSTSYG00000011192) #25 NQO2 (ENSTSYG00000003832) #26 SERPINB6 (ENSTSYG00000035626) #27 SERPINB9 (ENSTSYG00000003659) #31 Laurasiatheria DUPLICATION Laurasiatheria DUPLICATION Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Hedgehog MODERN SPECIES 3460 ENSEEUG00000002989 #22 ENSEEUG00000002955 #22 BPHL (ENSEEUG00000002899) #24 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Carnivora ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Caniformia ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Ursidae ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Ursus ANCESTRAL SPECIES ENSGT00940000154150.wb.a #22 Polar bear MODERN SPECIES 181 FARS2 (ENSUMAG00000018618) #8 LYRM4 (ENSUMAG00000018628) #9 RPP40 (ENSUMAG00000018639) #11 CDYL (ENSUMAG00000018648) #12 ENSUMAG00000018660 ECI2 (ENSUMAG00000018673) #13 ENSUMAG00000018677 #15 FAM217A (ENSUMAG00000018684) #16 PRPF4B (ENSUMAG00000018696) #17 FAM50B (ENSUMAG00000018705) #18 PXDC1 (ENSUMAG00000018711) #19 SLC22A23 (ENSUMAG00000018716) #20 PSMG4 (ENSUMAG00000018729) #21 ENSUMAG00000018733 #22 ENSUMAG00000018735 #22 ENSUMAG00000018737 #22 BPHL (ENSUMAG00000018741) #24 RIPK1 (ENSUMAG00000018746) #25 NQO2 (ENSUMAG00000018754) #26 ENSUMAG00000018764 #27 SERPINB9 (ENSUMAG00000018772) #31 SERPINB1 (ENSUMAG00000018779) #35 WRNIP1 (ENSUMAG00000018782) #36 MYLK4 (ENSUMAG00000018791) GMDS (ENSUMAG00000018823) ENSUMAG00000018836 ENSUMAG00000018847 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018902 IRF4 (ENSUMAG00000018906) DUSP22 (ENSUMAG00000018924) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150.xb #22 ENSGT00940000175246 ENSGT00940000154150.wb.b #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 Eulipotyphla ANCESTRAL SPECIES 2278 ENSGT00940000154150.wb.b #22 ENSGT00390000004746 #24 Hedgehog MODERN SPECIES 3460 ENSEEUG00000002989 #22 ENSEEUG00000002955 #22 BPHL (ENSEEUG00000002899) #24 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00940000175246 ENSGT00940000154150.wb.b #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154150.wb.b #22 Carnivora ANCESTRAL SPECIES ENSGT00940000154150.wb.b #22 Felidae ANCESTRAL SPECIES ENSGT00940000154150.wb.b #22 Panthera ANCESTRAL SPECIES ENSGT00940000154150.wb.b #22 Tiger MODERN SPECIES 15 CAGE1 (ENSPTIG00000019168) SSR1 (ENSPTIG00000006156) LY86 (ENSPTIG00000014095) F13A1 (ENSPTIG00000014413) NRN1 (ENSPTIG00000015277) #7 FARS2 (ENSPTIG00000016684) #8 LYRM4 (ENSPTIG00000018145) #9 RPP40 (ENSPTIG00000018847) #11 CDYL (ENSPTIG00000004597) #12 ECI2 (ENSPTIG00000007246) #13 ENSPTIG00000011297 #15 FAM217A (ENSPTIG00000011724) #16 PRPF4B (ENSPTIG00000013243) #17 PXDC1 (ENSPTIG00000015113) #19 SLC22A23 (ENSPTIG00000015797) #20 TUBB2A (ENSPTIG00000019182) #22 BPHL (ENSPTIG00000019655) #24 RIPK1 (ENSPTIG00000000019) #25 ENSPTIG00000005890 NQO2 (ENSPTIG00000006542) #26 ENSPTIG00000008964 #27 SERPINB9 (ENSPTIG00000011314) #31 SERPINB1 (ENSPTIG00000012609) #35 WRNIP1 (ENSPTIG00000012879) #36 MYLK4 (ENSPTIG00000014895) GMDS (ENSPTIG00000016896) EXOC2 (ENSPTIG00000017629) IRF4 (ENSPTIG00000019685) DUSP22 (ENSPTIG00000020047) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150.xb #22 ENSGT00940000175246 ENSGT00940000154150.wb.b #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154150.xb #22 Common shrew MODERN SPECIES 8252 ENSSARG00000003430 #22 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00940000175246 ENSGT00940000154150.wb.b #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Equus ANCESTRAL SPECIES 47 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT01000000214902 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Donkey DUPLICATION Donkey MODERN SPECIES 27 NRN1 (ENSEASG00005031623) #7 FARS2 (ENSEASG00005012111) #8 ENSEASG00005012113 PPP1R3G (ENSEASG00005030057) #10 RPP40 (ENSEASG00005012116) #11 CDYL (ENSEASG00005012117) #12 ENSEASG00005032457 ECI2 (ENSEASG00005012124) #13 ENSEASG00005012126 #15 FAM217A (ENSEASG00005012129) #16 PRPF4B (ENSEASG00005012132) #17 FAM50B (ENSEASG00005012136) #18 ENSEASG00005012139 #19 SLC22A23 (ENSEASG00005012146) #20 PSMG4 (ENSEASG00005012153) #21 TUBB2B (ENSEASG00005032707) #22 ENSEASG00005012165 TUBB2A (ENSEASG00005030900) #22 BPHL (ENSEASG00005012172) #24 RIPK1 (ENSEASG00005012175) #25 NQO2 (ENSEASG00005012177) #26 ENSEASG00005012179 #27 SERPINB9 (ENSEASG00005012183) #31 SERPINB1 (ENSEASG00005012189) #35 WRNIP1 (ENSEASG00005012190) #36 MYLK4 (ENSEASG00005012193) GMDS (ENSEASG00005012197) ENSEASG00005031584 FOXF2 (ENSEASG00005012206) EXOC2 (ENSEASG00005012215) IRF4 (ENSEASG00005012225) Donkey MODERN SPECIES 27 ENSEASG00005012113 PPP1R3G (ENSEASG00005030057) #10 RPP40 (ENSEASG00005012116) #11 CDYL (ENSEASG00005012117) #12 ENSEASG00005032457 ECI2 (ENSEASG00005012124) #13 ENSEASG00005012126 #15 FAM217A (ENSEASG00005012129) #16 PRPF4B (ENSEASG00005012132) #17 FAM50B (ENSEASG00005012136) #18 ENSEASG00005012139 #19 SLC22A23 (ENSEASG00005012146) #20 PSMG4 (ENSEASG00005012153) #21 TUBB2B (ENSEASG00005032707) #22 ENSEASG00005012165 TUBB2A (ENSEASG00005030900) #22 BPHL (ENSEASG00005012172) #24 RIPK1 (ENSEASG00005012175) #25 NQO2 (ENSEASG00005012177) #26 ENSEASG00005012179 #27 SERPINB9 (ENSEASG00005012183) #31 SERPINB1 (ENSEASG00005012189) #35 WRNIP1 (ENSEASG00005012190) #36 MYLK4 (ENSEASG00005012193) GMDS (ENSEASG00005012197) ENSEASG00005031584 FOXF2 (ENSEASG00005012206) EXOC2 (ENSEASG00005012215) IRF4 (ENSEASG00005012225) ENSEASG00005012235 ENSEASG00005027632 Horse DUPLICATION Horse MODERN SPECIES 12 NRN1 (ENSECAG00000007120) #7 FARS2 (ENSECAG00000000279) #8 ENSECAG00000050087 #9 RPP40 (ENSECAG00000017247) #11 CDYL (ENSECAG00000014044) #12 ENSECAG00000046549 ECI2 (ENSECAG00000000313) #13 ENSECAG00000000206 #15 FAM217A (ENSECAG00000000041) #16 PRPF4B (ENSECAG00000014830) #17 ENSECAG00000033231 FAM50B (ENSECAG00000014818) #18 PXDC1 (ENSECAG00000014479) #19 SLC22A23 (ENSECAG00000013821) #20 ENSECAG00000013813 #21 TUBB2B (ENSECAG00000058458) #22 TUBB (ENSECAG00000020234) #22 BPHL (ENSECAG00000013049) #24 RIPK1 (ENSECAG00000010293) #25 NQO2 (ENSECAG00000008386) #26 SERPINB6 (ENSECAG00000015966) #27 SERPINB9 (ENSECAG00000012506) #31 SERPINB1 (ENSECAG00000009896) #35 WRNIP1 (ENSECAG00000008348) #36 MYLK4 (ENSECAG00000006224) ENSECAG00000060133 GMDS (ENSECAG00000001999) FOXC1 (ENSECAG00000029381) FOXQ1 (ENSECAG00000034522) ENSECAG00000046100 EXOC2 (ENSECAG00000000078) Horse MODERN SPECIES 12 FARS2 (ENSECAG00000000279) #8 ENSECAG00000050087 #9 RPP40 (ENSECAG00000017247) #11 CDYL (ENSECAG00000014044) #12 ENSECAG00000046549 ECI2 (ENSECAG00000000313) #13 ENSECAG00000000206 #15 FAM217A (ENSECAG00000000041) #16 PRPF4B (ENSECAG00000014830) #17 ENSECAG00000033231 FAM50B (ENSECAG00000014818) #18 PXDC1 (ENSECAG00000014479) #19 SLC22A23 (ENSECAG00000013821) #20 ENSECAG00000013813 #21 TUBB2B (ENSECAG00000058458) #22 TUBB (ENSECAG00000020234) #22 BPHL (ENSECAG00000013049) #24 RIPK1 (ENSECAG00000010293) #25 NQO2 (ENSECAG00000008386) #26 SERPINB6 (ENSECAG00000015966) #27 SERPINB9 (ENSECAG00000012506) #31 SERPINB1 (ENSECAG00000009896) #35 WRNIP1 (ENSECAG00000008348) #36 MYLK4 (ENSECAG00000006224) ENSECAG00000060133 GMDS (ENSECAG00000001999) FOXC1 (ENSECAG00000029381) FOXQ1 (ENSECAG00000034522) ENSECAG00000046100 EXOC2 (ENSECAG00000000078) IRF4 (ENSECAG00000016808) Chiroptera ANCESTRAL SPECIES 50 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154931 #31 ENSGT00940000154519 #27 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Megabat DUPLICATION Megabat MODERN SPECIES 783 PSMG4 (ENSPVAG00000013677) #21 TUBB2B (ENSPVAG00000013676) #22 Megabat MODERN SPECIES 782 TUBB2A (ENSPVAG00000003354) #22 BPHL (ENSPVAG00000003353) #24 RIPK1 (ENSPVAG00000003352) #25 Microchiroptera ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154573 #35 ENSGT00940000154931 #31 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Greater horseshoe bat MODERN SPECIES 27 FARS2 (ENSRFEG00010000859) #8 LYRM4 (ENSRFEG00010000898) #9 ENSRFEG00010000919 PPP1R3G (ENSRFEG00010000932) #10 RPP40 (ENSRFEG00010000963) #11 CDYL (ENSRFEG00010001012) #12 ECI2 (ENSRFEG00010001054) #13 ENSRFEG00010001108 #15 FAM217A (ENSRFEG00010001133) #16 PRPF4B (ENSRFEG00010001165) #17 ENSRFEG00010001206 FAM50B (ENSRFEG00010001229) #18 PXDC1 (ENSRFEG00010001243) #19 SLC22A23 (ENSRFEG00010001273) #20 PSMG4 (ENSRFEG00010001338) #21 TUBB2B (ENSRFEG00010001382) #22 BPHL (ENSRFEG00010001423) #24 RIPK1 (ENSRFEG00010001467) #25 ENSRFEG00010001506 NQO2 (ENSRFEG00010001518) #26 ENSRFEG00010001556 #31 ENSRFEG00010001648 #31 ENSRFEG00010001710 #27 SERPINB1 (ENSRFEG00010001747) #35 ENSRFEG00010001768 WRNIP1 (ENSRFEG00010001786) #36 MYLK4 (ENSRFEG00010001828) GMDS (ENSRFEG00010001869) NACA2 (ENSRFEG00010001919) ENSRFEG00010001928 ENSRFEG00010001950 Microbat DUPLICATION Microbat MODERN SPECIES 958 ENSMLUG00000025590 PXDC1 (ENSMLUG00000011359) #19 ENSMLUG00000028399 ENSMLUG00000006824 #20 PSMG4 (ENSMLUG00000024906) #21 TUBB2B (ENSMLUG00000006805) #22 ENSMLUG00000016179 #22 BPHL (ENSMLUG00000016171) #24 RIPK1 (ENSMLUG00000016163) #25 NQO2 (ENSMLUG00000000386) #26 ENSMLUG00000008803 #27 ENSMLUG00000016863 #35 ENSMLUG00000016842 #35 ENSMLUG00000016858 #35 ENSMLUG00000016847 #35 ENSMLUG00000016839 #35 WRNIP1 (ENSMLUG00000011209) #36 MYLK4 (ENSMLUG00000011182) ENSMLUG00000003910 GMDS (ENSMLUG00000003934) ENSMLUG00000023644 FOXF2 (ENSMLUG00000030088) Microbat MODERN SPECIES 958 ENSMLUG00000025590 PXDC1 (ENSMLUG00000011359) #19 ENSMLUG00000028399 ENSMLUG00000006824 #20 PSMG4 (ENSMLUG00000024906) #21 TUBB2B (ENSMLUG00000006805) #22 ENSMLUG00000016179 #22 BPHL (ENSMLUG00000016171) #24 RIPK1 (ENSMLUG00000016163) #25 NQO2 (ENSMLUG00000000386) #26 ENSMLUG00000008803 #27 ENSMLUG00000016863 #35 ENSMLUG00000016842 #35 ENSMLUG00000016858 #35 ENSMLUG00000016847 #35 ENSMLUG00000016839 #35 WRNIP1 (ENSMLUG00000011209) #36 MYLK4 (ENSMLUG00000011182) ENSMLUG00000003910 GMDS (ENSMLUG00000003934) ENSMLUG00000023644 Carnivora ANCESTRAL SPECIES 4 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 Caniformia ANCESTRAL SPECIES 3 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 Caniformia_b ANCESTRAL SPECIES 31 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 Ursidae ANCESTRAL SPECIES 39 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b.x #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 ENSGT00390000010872 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 336 ENSAMEG00000031238 #22 Giant Panda MODERN SPECIES 15 NRN1 (ENSAMEG00000024302) #7 FARS2 (ENSAMEG00000027009) #8 LYRM4 (ENSAMEG00000017445) #9 PPP1R3G (ENSAMEG00000025070) #10 RPP40 (ENSAMEG00000012938) #11 CDYL (ENSAMEG00000012914) #12 ENSAMEG00000012910 ECI2 (ENSAMEG00000012888) #13 ENSAMEG00000012884 #15 FAM217A (ENSAMEG00000012875) #16 PRPF4B (ENSAMEG00000012832) #17 FAM50B (ENSAMEG00000019077) #18 PXDC1 (ENSAMEG00000014456) #19 ENSAMEG00000014434 #20 ENSAMEG00000014430 #21 ENSAMEG00000030040 #22 ENSAMEG00000023499 ENSAMEG00000014416 BPHL (ENSAMEG00000014392) #24 RIPK1 (ENSAMEG00000014389) #25 NQO2 (ENSAMEG00000014373) #26 ENSAMEG00000003548 #27 SERPINB9 (ENSAMEG00000003574) #31 SERPINB1 (ENSAMEG00000003580) #35 WRNIP1 (ENSAMEG00000027067) #36 ENSAMEG00000025653 MYLK4 (ENSAMEG00000010940) GMDS (ENSAMEG00000010935) ENSAMEG00000010931 ENSAMEG00000025085 ENSAMEG00000025252 Ursus ANCESTRAL SPECIES 34 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b.x #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00390000008828 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00860000135685 ENSGT00390000010872 ENSGT00940000159059 Polar bear DUPLICATION Polar bear MODERN SPECIES 181 F13A1 (ENSUMAG00000018590) NRN1 (ENSUMAG00000018605) #7 FARS2 (ENSUMAG00000018618) #8 LYRM4 (ENSUMAG00000018628) #9 RPP40 (ENSUMAG00000018639) #11 CDYL (ENSUMAG00000018648) #12 ENSUMAG00000018660 ECI2 (ENSUMAG00000018673) #13 ENSUMAG00000018677 #15 FAM217A (ENSUMAG00000018684) #16 PRPF4B (ENSUMAG00000018696) #17 FAM50B (ENSUMAG00000018705) #18 PXDC1 (ENSUMAG00000018711) #19 SLC22A23 (ENSUMAG00000018716) #20 PSMG4 (ENSUMAG00000018729) #21 ENSUMAG00000018733 #22 ENSUMAG00000018735 #22 ENSUMAG00000018737 #22 BPHL (ENSUMAG00000018741) #24 RIPK1 (ENSUMAG00000018746) #25 NQO2 (ENSUMAG00000018754) #26 ENSUMAG00000018764 #27 SERPINB9 (ENSUMAG00000018772) #31 SERPINB1 (ENSUMAG00000018779) #35 WRNIP1 (ENSUMAG00000018782) #36 MYLK4 (ENSUMAG00000018791) GMDS (ENSUMAG00000018823) ENSUMAG00000018836 ENSUMAG00000018847 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018902 Polar bear MODERN SPECIES 181 NRN1 (ENSUMAG00000018605) #7 FARS2 (ENSUMAG00000018618) #8 LYRM4 (ENSUMAG00000018628) #9 RPP40 (ENSUMAG00000018639) #11 CDYL (ENSUMAG00000018648) #12 ENSUMAG00000018660 ECI2 (ENSUMAG00000018673) #13 ENSUMAG00000018677 #15 FAM217A (ENSUMAG00000018684) #16 PRPF4B (ENSUMAG00000018696) #17 FAM50B (ENSUMAG00000018705) #18 PXDC1 (ENSUMAG00000018711) #19 SLC22A23 (ENSUMAG00000018716) #20 PSMG4 (ENSUMAG00000018729) #21 ENSUMAG00000018733 #22 ENSUMAG00000018735 #22 ENSUMAG00000018737 #22 BPHL (ENSUMAG00000018741) #24 RIPK1 (ENSUMAG00000018746) #25 NQO2 (ENSUMAG00000018754) #26 ENSUMAG00000018764 #27 SERPINB9 (ENSUMAG00000018772) #31 SERPINB1 (ENSUMAG00000018779) #35 WRNIP1 (ENSUMAG00000018782) #36 MYLK4 (ENSUMAG00000018791) GMDS (ENSUMAG00000018823) ENSUMAG00000018836 ENSUMAG00000018847 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018902 IRF4 (ENSUMAG00000018906) American black bear DUPLICATION American black bear MODERN SPECIES 1147 SLC22A23 (ENSUAMG00000012637) #20 PSMG4 (ENSUAMG00000012633) #21 TUBB2B (ENSUAMG00000012630) #22 ENSUAMG00000012628 American black bear MODERN SPECIES 6712 ENSUAMG00000015412 #22 BPHL (ENSUAMG00000015404) #24 RIPK1 (ENSUAMG00000015400) #25 Mustelinae ANCESTRAL SPECIES 42 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Ferret MODERN SPECIES 202 F13A1 (ENSMPUG00000000546) ENSMPUG00000000541 ENSMPUG00000000540 #7 ENSMPUG00000000537 FARS2 (ENSMPUG00000000534) #8 LYRM4 (ENSMPUG00000000532) #9 RPP40 (ENSMPUG00000000530) #11 CDYL (ENSMPUG00000000521) #12 ECI2 (ENSMPUG00000000515) #13 ENSMPUG00000000507 #15 FAM217A (ENSMPUG00000000502) #16 PRPF4B (ENSMPUG00000000500) #17 FAM50B (ENSMPUG00000000493) #18 PXDC1 (ENSMPUG00000000491) #19 SLC22A23 (ENSMPUG00000000466) #20 TUBB2B (ENSMPUG00000000462) #22 BPHL (ENSMPUG00000000459) #24 RIPK1 (ENSMPUG00000000454) #25 NQO2 (ENSMPUG00000000451) #26 ENSMPUG00000000448 #27 ENSMPUG00000000447 SERPINB9 (ENSMPUG00000000446) #31 SERPINB1 (ENSMPUG00000000421) #35 WRNIP1 (ENSMPUG00000000417) #36 MYLK4 (ENSMPUG00000000408) ENSMPUG00000018450 GMDS (ENSMPUG00000000399) FOXC1 (ENSMPUG00000018449) FOXF2 (ENSMPUG00000000392) FOXQ1 (ENSMPUG00000018966) ENSMPUG00000000390 American mink MODERN SPECIES 158 FAM50B (ENSNVIG00000011720) #18 ENSNVIG00000011710 PXDC1 (ENSNVIG00000011694) #19 SLC22A23 (ENSNVIG00000011656) #20 PSMG4 (ENSNVIG00000011643) #21 TUBB2B (ENSNVIG00000011631) #22 BPHL (ENSNVIG00000011595) #24 RIPK1 (ENSNVIG00000011579) #25 NQO2 (ENSNVIG00000011533) #26 ENSNVIG00000011489 #27 SERPINB9 (ENSNVIG00000011466) #31 ILEU (ENSNVIG00000011445) #35 WRNIP1 (ENSNVIG00000011416) #36 MYLK4 (ENSNVIG00000011396) GMDS (ENSNVIG00000011372) FOXC1 (ENSNVIG00000011358) FOXF2 (ENSNVIG00000011356) ENSNVIG00000011350 ENSNVIG00000011347 EXOC2 (ENSNVIG00000011250) ENSNVIG00000011228 Canidae ANCESTRAL SPECIES 48 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 ENSGT00390000014654 ENSGT00940000163032 Red fox MODERN SPECIES 173 CDYL (ENSVVUG00000018989) #12 ECI2 (ENSVVUG00000019007) #13 ENSVVUG00000019015 #15 FAM217A (ENSVVUG00000019019) #16 PRPF4B (ENSVVUG00000019025) #17 ENSVVUG00000019034 PXDC1 (ENSVVUG00000019041) #19 SLC22A23 (ENSVVUG00000019044) #20 TUBB2B (ENSVVUG00000019054) #22 ENSVVUG00000019059 #24 ENSVVUG00000019060 #24 ENSVVUG00000019068 RIPK1 (ENSVVUG00000019070) #25 NQO2 (ENSVVUG00000019083) #26 ENSVVUG00000019088 #27 SERPINB9 (ENSVVUG00000019101) #31 SERPINB1 (ENSVVUG00000019110) #35 WRNIP1 (ENSVVUG00000019115) #36 MYLK4 (ENSVVUG00000019119) RPLP2 (ENSVVUG00000019125) GMDS (ENSVVUG00000019130) ENSVVUG00000019136 ENSVVUG00000019144 ENSVVUG00000019147 Canis_lupus ANCESTRAL SPECIES 36 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00980000203340 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000003582.q.a.b.a.b.a.b ENSGT01020000230346.C.e.c.b ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00970000193590.b.c.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Dingo MODERN SPECIES 411 LYRM4 (ENSCAFG00020013362) #9 ENSCAFG00020013366 #10 RPP40 (ENSCAFG00020013380) #11 CDYL (ENSCAFG00020013382) #12 ENSCAFG00020013385 ECI2 (ENSCAFG00020013391) #13 ENSCAFG00020013395 #15 FAM217A (ENSCAFG00020013397) #16 PRPF4B (ENSCAFG00020013403) #17 ENSCAFG00020000097 ENSCAFG00020000116 ENSCAFG00020000131 ENSCAFG00020000138 #19 SLC22A23 (ENSCAFG00020000148) #20 ENSCAFG00020000376 #21 TUBB2B (ENSCAFG00020000389) #22 BPHL (ENSCAFG00020000419) #24 RIPK1 (ENSCAFG00020000428) #25 ENSCAFG00020000437 NQO2 (ENSCAFG00020000450) #26 ENSCAFG00020000462 #27 SERPINB9 (ENSCAFG00020000463) #31 SERPINB1 (ENSCAFG00020000473) #35 WRNIP1 (ENSCAFG00020000482) #36 MYLK4 (ENSCAFG00020000493) GMDS (ENSCAFG00020000552) ENSCAFG00020000565 ENSCAFG00020000579 ENSCAFG00020000590 FOXF2 (ENSCAFG00020000598) ENSCAFG00020000606 Dog MODERN SPECIES 28 FARS2 (ENSCAFG00845019317) #8 LYRM4 (ENSCAFG00845019185) #9 ENSCAFG00845019068 #10 RPP40 (ENSCAFG00845018947) #11 CDYL (ENSCAFG00845018889) #12 ENSCAFG00845018833 ECI2 (ENSCAFG00845018709) #13 ENSCAFG00845018634 #15 ENSCAFG00845018572 #16 PRPF4B (ENSCAFG00845018389) #17 ENSCAFG00845018330 ENSCAFG00845018280 ENSCAFG00845018193 #19 SLC22A23 (ENSCAFG00845017898) #20 PSMG4 (ENSCAFG00845017809) #21 TUBB2B (ENSCAFG00845017639) #22 BPHL (ENSCAFG00845017516) #24 ENSCAFG00845017474 RIPK1 (ENSCAFG00845017400) #25 NQO2 (ENSCAFG00845017337) #26 ENSCAFG00845017319 SERPINB6 (ENSCAFG00845017287) #27 SERPINB9 (ENSCAFG00845017203) #31 SERPINB1 (ENSCAFG00845017116) #35 WRNIP1 (ENSCAFG00845016996) #36 MYLK4 (ENSCAFG00845016887) ENSCAFG00845016489 ENSCAFG00845016313 ENSCAFG00845016281 ENSCAFG00845016251 FOXF2 (ENSCAFG00845016185) Felidae ANCESTRAL SPECIES 5 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000009819.a.b.a.a.b.b.b ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00550000074840.z ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Cat MODERN SPECIES 236 NRN1 (ENSFCAG00000030503) #7 FARS2 (ENSFCAG00000014441) #8 ENSFCAG00000051390 LYRM4 (ENSFCAG00000038299) #9 PPP1R3G (ENSFCAG00000041787) #10 RPP40 (ENSFCAG00000009249) #11 CDYL (ENSFCAG00000028494) #12 ECI2 (ENSFCAG00000012171) #13 ENSFCAG00000045175 #15 FAM217A (ENSFCAG00000012169) #16 PRPF4B (ENSFCAG00000030050) #17 FAM50B (ENSFCAG00000028350) #18 PXDC1 (ENSFCAG00000039703) #19 SLC22A23 (ENSFCAG00000025838) #20 PSMG4 (ENSFCAG00000046735) #21 TUBB2B (ENSFCAG00000014626) #22 BPHL (ENSFCAG00000046730) #24 RIPK1 (ENSFCAG00000014625) #25 ENSFCAG00000026193 NQO2 (ENSFCAG00000024592) #26 SERPINB6 (ENSFCAG00000000810) #27 SERPINB9 (ENSFCAG00000000807) #31 SERPINB1 (ENSFCAG00000008689) #35 WRNIP1 (ENSFCAG00000042833) #36 ENSFCAG00000053862 ENSFCAG00000034906 MYLK4 (ENSFCAG00000034770) GMDS (ENSFCAG00000004783) FOXC1 (ENSFCAG00000043380) FOXF2 (ENSFCAG00000005901) FOXQ1 (ENSFCAG00000036417) Panthera ANCESTRAL SPECIES 30 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000009819.a.b.a.b ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00550000074840.z ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Panthera_a ANCESTRAL SPECIES 32 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a ENSGT00940000154150.xb #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000009819.a.b.a.b ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT01000000215059 ENSGT00550000074840.z ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b lion DUPLICATION lion MODERN SPECIES 28 F13A1 (ENSPLOG00000019314) NRN1 (ENSPLOG00000019270) #7 FARS2 (ENSPLOG00000019222) #8 LYRM4 (ENSPLOG00000019169) #9 ENSPLOG00000019120 #10 RPP40 (ENSPLOG00000019021) #11 CDYL (ENSPLOG00000018938) #12 ECI2 (ENSPLOG00000018858) #13 ENSPLOG00000018809 #15 FAM217A (ENSPLOG00000018759) #16 PRPF4B (ENSPLOG00000018709) #17 FAM50B (ENSPLOG00000018680) #18 PXDC1 (ENSPLOG00000018629) #19 SLC22A23 (ENSPLOG00000018579) #20 ENSPLOG00000018533 TUBB2B (ENSPLOG00000018497) #22 ENSPLOG00000018446 #22 BPHL (ENSPLOG00000018383) #24 RIPK1 (ENSPLOG00000018363) #25 ENSPLOG00000018333 NQO2 (ENSPLOG00000018239) #26 SERPINB9 (ENSPLOG00000018094) #31 SERPINB1 (ENSPLOG00000018010) #35 WRNIP1 (ENSPLOG00000017949) #36 ENSPLOG00000017919 ENSPLOG00000017887 MYLK4 (ENSPLOG00000017722) GMDS (ENSPLOG00000017599) ENSPLOG00000017561 FOXF2 (ENSPLOG00000017522) FOXQ1 (ENSPLOG00000017508) lion MODERN SPECIES 28 NRN1 (ENSPLOG00000019270) #7 FARS2 (ENSPLOG00000019222) #8 LYRM4 (ENSPLOG00000019169) #9 ENSPLOG00000019120 #10 RPP40 (ENSPLOG00000019021) #11 CDYL (ENSPLOG00000018938) #12 ECI2 (ENSPLOG00000018858) #13 ENSPLOG00000018809 #15 FAM217A (ENSPLOG00000018759) #16 PRPF4B (ENSPLOG00000018709) #17 FAM50B (ENSPLOG00000018680) #18 PXDC1 (ENSPLOG00000018629) #19 SLC22A23 (ENSPLOG00000018579) #20 ENSPLOG00000018533 TUBB2B (ENSPLOG00000018497) #22 ENSPLOG00000018446 #22 BPHL (ENSPLOG00000018383) #24 RIPK1 (ENSPLOG00000018363) #25 ENSPLOG00000018333 NQO2 (ENSPLOG00000018239) #26 SERPINB9 (ENSPLOG00000018094) #31 SERPINB1 (ENSPLOG00000018010) #35 WRNIP1 (ENSPLOG00000017949) #36 ENSPLOG00000017919 ENSPLOG00000017887 MYLK4 (ENSPLOG00000017722) GMDS (ENSPLOG00000017599) ENSPLOG00000017561 FOXF2 (ENSPLOG00000017522) FOXQ1 (ENSPLOG00000017508) ENSPLOG00000017393 leopard DUPLICATION leopard MODERN SPECIES 79 ENSPPRG00000006505 FARS2 (ENSPPRG00000006027) #8 LYRM4 (ENSPPRG00000005664) #9 PPP1R3G (ENSPPRG00000015138) #10 RPP40 (ENSPPRG00000005612) #11 CDYL (ENSPPRG00000004629) #12 ENSPPRG00000003975 ECI2 (ENSPPRG00000003341) #13 ENSPPRG00000002615 #15 FAM217A (ENSPPRG00000002142) #16 PRPF4B (ENSPPRG00000001709) #17 PXDC1 (ENSPPRG00000001339) #19 SLC22A23 (ENSPPRG00000000705) #20 PSMG4 (ENSPPRG00000022994) #21 ENSPPRG00000023661 TUBB2B (ENSPPRG00000023755) #22 TUBB2A (ENSPPRG00000023932) #22 BPHL (ENSPPRG00000023975) #24 RIPK1 (ENSPPRG00000024036) #25 ENSPPRG00000024159 NQO2 (ENSPPRG00000024196) #26 ENSPPRG00000024624 #27 SERPINB9 (ENSPPRG00000020115) #31 SERPINB1 (ENSPPRG00000019499) #35 WRNIP1 (ENSPPRG00000018070) #36 ENSPPRG00000015212 MYLK4 (ENSPPRG00000014341) GMDS (ENSPPRG00000011992) FOXC1 (ENSPPRG00000014362) FOXF2 (ENSPPRG00000011053) FOXQ1 (ENSPPRG00000014349) leopard MODERN SPECIES 79 FARS2 (ENSPPRG00000006027) #8 LYRM4 (ENSPPRG00000005664) #9 PPP1R3G (ENSPPRG00000015138) #10 RPP40 (ENSPPRG00000005612) #11 CDYL (ENSPPRG00000004629) #12 ENSPPRG00000003975 ECI2 (ENSPPRG00000003341) #13 ENSPPRG00000002615 #15 FAM217A (ENSPPRG00000002142) #16 PRPF4B (ENSPPRG00000001709) #17 PXDC1 (ENSPPRG00000001339) #19 SLC22A23 (ENSPPRG00000000705) #20 PSMG4 (ENSPPRG00000022994) #21 ENSPPRG00000023661 TUBB2B (ENSPPRG00000023755) #22 TUBB2A (ENSPPRG00000023932) #22 BPHL (ENSPPRG00000023975) #24 RIPK1 (ENSPPRG00000024036) #25 ENSPPRG00000024159 NQO2 (ENSPPRG00000024196) #26 ENSPPRG00000024624 #27 SERPINB9 (ENSPPRG00000020115) #31 SERPINB1 (ENSPPRG00000019499) #35 WRNIP1 (ENSPPRG00000018070) #36 ENSPPRG00000015212 MYLK4 (ENSPPRG00000014341) GMDS (ENSPPRG00000011992) FOXC1 (ENSPPRG00000014362) FOXF2 (ENSPPRG00000011053) FOXQ1 (ENSPPRG00000014349) EXOC2 (ENSPPRG00000010340) Artiodactyla DUPLICATION Artiodactyla DUPLICATION Artiodactyla ANCESTRAL SPECIES 15 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.s.a #22 ENSGT00940000167417.a ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b Artiodactyla_a ANCESTRAL SPECIES 27 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 ENSGT00940000159059 Pecora ANCESTRAL SPECIES 32 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 ENSGT00940000159059 Percora_a ANCESTRAL SPECIES 12 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.f.a.b.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 Bovidae ANCESTRAL SPECIES 13 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.f.a.b.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 Bovinae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #22 American bison MODERN SPECIES 2738 ENSBBBG00000001144 #13 ENSBBBG00000001114 #15 FAM217A (ENSBBBG00000001094) #16 PRPF4B (ENSBBBG00000001052) #17 ENSBBBG00000000979 #20 ENSBBBG00000000939 #21 ENSBBBG00000000913 #22 Bos ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #22 Bos_a ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #22 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #20 ENSBMUG00000009939 #22 ENSBMUG00000009950 #22 ENSBMUG00000009966 #22 BPHL (ENSBMUG00000009972) #24 RIPK1 (ENSBMUG00000009980) #25 NQO2 (ENSBMUG00000010004) #26 ENSBMUG00000010067 #27 Camelidae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #22 Alpaca MODERN SPECIES 2132 ENSVPAG00000001566 #22 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.s.a #22 ENSGT00940000167417.a ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Suina ANCESTRAL SPECIES 8 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a.b ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 Pig MODERN SPECIES 15 LY86 (ENSSSCG00000032355) F13A1 (ENSSSCG00000024310) NRN1 (ENSSSCG00000026211) #7 FARS2 (ENSSSCG00000038717) #8 LYRM4 (ENSSSCG00000031269) #9 PPP1R3G (ENSSSCG00000000997) #10 RPP40 (ENSSSCG00000000998) #11 CDYL (ENSSSCG00000000999) #12 ECI2 (ENSSSCG00000001000) #13 ENSSSCG00000001001 #15 PRPF4B (ENSSSCG00000001002) #17 FAM50B (ENSSSCG00000026323) #18 PXDC1 (ENSSSCG00000025582) #19 SLC22A23 (ENSSSCG00000001004) #20 ENSSSCG00000036988 TUBB2B (ENSSSCG00000033655) #22 TUBB2A (ENSSSCG00000062050) #22 BPHL (ENSSSCG00000001008) #24 RIPK1 (ENSSSCG00000001009) #25 NQO2 (ENSSSCG00000020758) #26 ENSSSCG00000038404 #27 SERPINB9 (ENSSSCG00000031615) #31 SERPINB1 (ENSSSCG00000001011) #35 WRNIP1 (ENSSSCG00000001010) #36 ENSSSCG00000028777 FOXC1 (ENSSSCG00000039756) GMDS (ENSSSCG00000000994) FOXF2 (ENSSSCG00000037195) FOXQ1 (ENSSSCG00000000991) ENSSSCG00000059227 ENSSSCG00000041494 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Pecora ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Percora_a ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Bovidae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Bovinae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Bos ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #22 Bos_a ANCESTRAL SPECIES 49 ENSGT00950000185466 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.e.b.b.b.a #27 ENSGT00940000154519.e.b.b.a.c #27 ENSGT00940000154519.e.a.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #20 ENSBMUG00000009939 #22 ENSBMUG00000009950 #22 ENSBMUG00000009966 #22 BPHL (ENSBMUG00000009972) #24 RIPK1 (ENSBMUG00000009980) #25 NQO2 (ENSBMUG00000010004) #26 ENSBMUG00000010067 #27 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.s.a #22 ENSGT00940000167417.a ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 Artiodactyla_a ANCESTRAL SPECIES 27 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Camelidae ANCESTRAL SPECIES 54 ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00910000147105 ENSGT00440000033640 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Arabian camel MODERN SPECIES 12 LY86 (ENSCDRG00005009098) F13A1 (ENSCDRG00005009013) ENSCDRG00005008875 #7 FARS2 (ENSCDRG00005008824) #8 LYRM4 (ENSCDRG00005016295) #9 RPP40 (ENSCDRG00005015971) #11 CDYL (ENSCDRG00005015913) #12 ENSCDRG00005015881 ECI2 (ENSCDRG00005015840) #13 ENSCDRG00005015800 #15 FAM217A (ENSCDRG00005015744) #16 PRPF4B (ENSCDRG00005015684) #17 PXDC1 (ENSCDRG00005015617) #19 SLC22A23 (ENSCDRG00005015543) #20 ENSCDRG00005015514 #21 TUBB2B (ENSCDRG00005015474) #22 BPHL (ENSCDRG00005015385) #24 RIPK1 (ENSCDRG00005015351) #25 NQO2 (ENSCDRG00005015309) #26 ENSCDRG00005015210 #27 SERPINB9 (ENSCDRG00005015109) #31 SERPINB1 (ENSCDRG00005015041) #35 WRNIP1 (ENSCDRG00005014977) #36 MYLK4 (ENSCDRG00005014815) ENSCDRG00005014762 GMDS (ENSCDRG00005014630) EXOC2 (ENSCDRG00005013918) IRF4 (ENSCDRG00005013862) ENSCDRG00005013769 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 Cetacea ANCESTRAL SPECIES 7 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.c #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Blue whale MODERN SPECIES 2 F13A1 (ENSBMSG00010007558) NRN1 (ENSBMSG00010007552) #7 FARS2 (ENSBMSG00010007535) #8 LYRM4 (ENSBMSG00010007512) #9 PPP1R3G (ENSBMSG00010007505) #10 RPP40 (ENSBMSG00010007489) #11 CDYL (ENSBMSG00010007473) #12 ECI2 (ENSBMSG00010007466) #13 ENSBMSG00010007461 ENSBMSG00010007453 #15 FAM217A (ENSBMSG00010007442) #16 PRPF4B (ENSBMSG00010007428) #17 PXDC1 (ENSBMSG00010007412) #19 SLC22A23 (ENSBMSG00010007297) #20 PSMG4 (ENSBMSG00010007269) #21 TUBB2A (ENSBMSG00010007239) #22 BPHL (ENSBMSG00010007209) #24 RIPK1 (ENSBMSG00010007199) #25 NQO2 (ENSBMSG00010007187) #26 ENSBMSG00010007165 #27 SERPINB9 (ENSBMSG00010007151) #31 SERPINB1 (ENSBMSG00010007136) #35 WRNIP1 (ENSBMSG00010007123) #36 MYLK4 (ENSBMSG00010007088) ENSBMSG00010007069 GMDS (ENSBMSG00010007043) FOXC1 (ENSBMSG00010007030) FOXF2 (ENSBMSG00010007027) FOXQ1 (ENSBMSG00010007017) EXOC2 (ENSBMSG00010006978) IRF4 (ENSBMSG00010006934) Odontoceti ANCESTRAL SPECIES 5 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.c #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 9 LY86 (ENSPCTG00005008221) F13A1 (ENSPCTG00005008252) NRN1 (ENSPCTG00005008319) #7 ENSPCTG00005008355 FARS2 (ENSPCTG00005008380) #8 LYRM4 (ENSPCTG00005008407) #9 PPP1R3G (ENSPCTG00005008426) #10 RPP40 (ENSPCTG00005008452) #11 ENSPCTG00005008550 #12 ECI2 (ENSPCTG00005008598) #13 ENSPCTG00005008657 #15 FAM217A (ENSPCTG00005008731) #16 PRPF4B (ENSPCTG00005008801) #17 PXDC1 (ENSPCTG00005008936) #19 TUBB2A (ENSPCTG00005008977) #22 TUBB2A (ENSPCTG00005009021) #22 BPHL (ENSPCTG00005009057) #24 RIPK1 (ENSPCTG00005009207) #25 NQO2 (ENSPCTG00005009321) #26 ENSPCTG00005009401 #27 SERPINB9 (ENSPCTG00005009506) #31 ENSPCTG00005009581 #35 WRNIP1 (ENSPCTG00005009615) #36 MYLK4 (ENSPCTG00005009809) ENSPCTG00005010105 GMDS (ENSPCTG00005010205) ENSPCTG00005010376 FOXF2 (ENSPCTG00005010432) EXOC2 (ENSPCTG00005010489) IRF4 (ENSPCTG00005010577) DUSP22 (ENSPCTG00005010689) Sperm whale MODERN SPECIES 9 DSP (ENSPCTG00005007793) LY86 (ENSPCTG00005008221) F13A1 (ENSPCTG00005008252) NRN1 (ENSPCTG00005008319) #7 ENSPCTG00005008355 FARS2 (ENSPCTG00005008380) #8 LYRM4 (ENSPCTG00005008407) #9 PPP1R3G (ENSPCTG00005008426) #10 RPP40 (ENSPCTG00005008452) #11 ENSPCTG00005008550 #12 ECI2 (ENSPCTG00005008598) #13 ENSPCTG00005008657 #15 FAM217A (ENSPCTG00005008731) #16 PRPF4B (ENSPCTG00005008801) #17 PXDC1 (ENSPCTG00005008936) #19 TUBB2A (ENSPCTG00005008977) #22 TUBB2A (ENSPCTG00005009021) #22 BPHL (ENSPCTG00005009057) #24 RIPK1 (ENSPCTG00005009207) #25 NQO2 (ENSPCTG00005009321) #26 ENSPCTG00005009401 #27 SERPINB9 (ENSPCTG00005009506) #31 ENSPCTG00005009581 #35 WRNIP1 (ENSPCTG00005009615) #36 MYLK4 (ENSPCTG00005009809) ENSPCTG00005010105 GMDS (ENSPCTG00005010205) ENSPCTG00005010376 FOXF2 (ENSPCTG00005010432) EXOC2 (ENSPCTG00005010489) IRF4 (ENSPCTG00005010577) Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u.a #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.c #27 ENSGT00940000154573.u #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u.a #12 ENSGT00940000155105 #13 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.c #27 ENSGT00940000154573.u #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Monodontidae ANCESTRAL SPECIES 4 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u.a #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.c #27 ENSGT00390000008538 #36 ENSGT01010000230145 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Narwhal MODERN SPECIES 310 RREB1 (ENSMMNG00015010935) LY86 (ENSMMNG00015010924) F13A1 (ENSMMNG00015010895) NRN1 (ENSMMNG00015010879) #7 ENSMMNG00015010864 FARS2 (ENSMMNG00015010823) #8 ENSMMNG00015010792 #9 PPP1R3G (ENSMMNG00015010783) #10 RPP40 (ENSMMNG00015010735) #11 ENSMMNG00015010684 #12 ECI2 (ENSMMNG00015010653) #13 PRPF4B (ENSMMNG00015010640) #17 PXDC1 (ENSMMNG00015010618) #19 SLC22A23 (ENSMMNG00015010564) #20 PSMG4 (ENSMMNG00015010506) #21 TUBB2B (ENSMMNG00015010464) #22 BPHL (ENSMMNG00015010397) #24 RIPK1 (ENSMMNG00015010383) #25 NQO2 (ENSMMNG00015010357) #26 ENSMMNG00015010309 #27 WRNIP1 (ENSMMNG00015010266) #36 ENSMMNG00015010243 MYLK4 (ENSMMNG00015010218) ENSMMNG00015010189 GMDS (ENSMMNG00015014105) FOXC1 (ENSMMNG00015014093) FOXF2 (ENSMMNG00015014085) EXOC2 (ENSMMNG00015014030) IRF4 (ENSMMNG00015014004) DUSP22 (ENSMMNG00015013987) VAMP7 (ENSMMNG00015013948) Beluga whale MODERN SPECIES 10 RREB1 (ENSDLEG00000001663) LY86 (ENSDLEG00000001638) F13A1 (ENSDLEG00000001613) NRN1 (ENSDLEG00000001599) #7 FARS2 (ENSDLEG00000001576) #8 ENSDLEG00000001554 LYRM4 (ENSDLEG00000001535) #9 PPP1R3G (ENSDLEG00000001526) #10 RPP40 (ENSDLEG00000001512) #11 ENSDLEG00000001490 #12 ECI2 (ENSDLEG00000001462) #13 PRPF4B (ENSDLEG00000001431) #17 ENSDLEG00000001426 #19 SLC22A23 (ENSDLEG00000001395) #20 PSMG4 (ENSDLEG00000001383) #21 TUBB2A (ENSDLEG00000001358) #22 BPHL (ENSDLEG00000001285) #24 RIPK1 (ENSDLEG00000001254) #25 NQO2 (ENSDLEG00000001236) #26 ENSDLEG00000001211 #27 WRNIP1 (ENSDLEG00000001184) #36 ENSDLEG00000001175 ENSDLEG00000001169 GMDS (ENSDLEG00000001155) FOXC1 (ENSDLEG00000001148) FOXF2 (ENSDLEG00000001139) ENSDLEG00000001130 EXOC2 (ENSDLEG00000000911) IRF4 (ENSDLEG00000000806) ENSDLEG00000000793 ENSDLEG00000000776 Vaquita MODERN SPECIES 2 RREB1 (ENSPSNG00000014036) LY86 (ENSPSNG00000014090) F13A1 (ENSPSNG00000014208) NRN1 (ENSPSNG00000014328) #7 FARS2 (ENSPSNG00000014384) #8 LYRM4 (ENSPSNG00000014436) #9 PPP1R3G (ENSPSNG00000014484) #10 RPP40 (ENSPSNG00000014549) #11 ENSPSNG00000014779 #12 ECI2 (ENSPSNG00000014875) #13 FAM217A (ENSPSNG00000014949) #16 PRPF4B (ENSPSNG00000015086) #17 PXDC1 (ENSPSNG00000015171) #19 SLC22A23 (ENSPSNG00000015233) #20 PSMG4 (ENSPSNG00000015357) #21 TUBB2A (ENSPSNG00000015438) #22 BPHL (ENSPSNG00000015565) #24 RIPK1 (ENSPSNG00000015681) #25 NQO2 (ENSPSNG00000015747) #26 ENSPSNG00000015836 #27 SERPINB1 (ENSPSNG00000015980) #35 WRNIP1 (ENSPSNG00000016040) #36 MYLK4 (ENSPSNG00000016111) ENSPSNG00000016357 GMDS (ENSPSNG00000016429) ENSPSNG00000016521 FOXF2 (ENSPSNG00000016588) FOXQ1 (ENSPSNG00000016632) EXOC2 (ENSPSNG00000016671) IRF4 (ENSPSNG00000016722) DUSP22 (ENSPSNG00000016848) Dolphin DUPLICATION Dolphin MODERN SPECIES 161 PSMG4 (ENSTTRG00000006146) #21 TUBB2B (ENSTTRG00000006144) #22 ENSTTRG00000006142 #22 BPHL (ENSTTRG00000006140) #24 ENSTTRG00000006137 #25 NQO2 (ENSTTRG00000006128) #26 Dolphin MODERN SPECIES 161 PSMG4 (ENSTTRG00000006146) #21 TUBB2B (ENSTTRG00000006144) #22 ENSTTRG00000006142 #22 BPHL (ENSTTRG00000006140) #24 ENSTTRG00000006137 #25 NQO2 (ENSTTRG00000006128) #26 Pecora ANCESTRAL SPECIES 32 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 Yarkand deer MODERN SPECIES 30 LY86 (ENSCHYG00000001035) F13A1 (ENSCHYG00000001064) NRN1 (ENSCHYG00000001106) #7 FARS2 (ENSCHYG00000001148) #8 ENSCHYG00000001244 #9 PPP1R3G (ENSCHYG00000001273) #10 RPP40 (ENSCHYG00000001289) #11 CDYL (ENSCHYG00000001347) #12 ECI2 (ENSCHYG00000001423) #13 ENSCHYG00000001482 #15 FAM217A (ENSCHYG00000001494) #16 PRPF4B (ENSCHYG00000001509) #17 SLC22A23 (ENSCHYG00000001566) #20 PSMG4 (ENSCHYG00000001621) #21 ENSCHYG00000001640 TUBB2B (ENSCHYG00000001657) #22 BPHL (ENSCHYG00000001696) #24 RIPK1 (ENSCHYG00000001750) #25 DUSP22 (ENSCHYG00000001773) IRF4 (ENSCHYG00000001815) EXOC2 (ENSCHYG00000001849) FOXF2 (ENSCHYG00000001915) GMDS (ENSCHYG00000001942) WRNIP1 (ENSCHYG00000001991) #36 SERPINB1 (ENSCHYG00000002011) #35 SERPINB9 (ENSCHYG00000002035) #31 Percora_a ANCESTRAL SPECIES 12 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.f.a.b.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Siberian musk deer MODERN SPECIES 96 NRN1 (ENSMMSG00000019951) #7 FARS2 (ENSMMSG00000019967) #8 ENSMMSG00000019992 ENSMMSG00000020008 ENSMMSG00000020020 #9 PPP1R3G (ENSMMSG00000020040) #10 RPP40 (ENSMMSG00000020056) #11 CDYL (ENSMMSG00000020126) #12 ECI2 (ENSMMSG00000020168) #13 ENSMMSG00000020286 #15 FAM217A (ENSMMSG00000000080) #16 PRPF4B (ENSMMSG00000000148) #17 PXDC1 (ENSMMSG00000000205) #19 SLC22A23 (ENSMMSG00000000252) #20 PSMG4 (ENSMMSG00000000373) #21 TUBB2B (ENSMMSG00000000409) #22 BPHL (ENSMMSG00000000460) #24 RIPK1 (ENSMMSG00000000490) #25 NQO2 (ENSMMSG00000000521) #26 ENSMMSG00000000568 #27 ENSMMSG00000000678 #27 ENSMMSG00000001423 #27 ENSMMSG00000001460 #27 ENSMMSG00000001478 #27 ENSMMSG00000001505 #27 SERPINB9 (ENSMMSG00000001536) #31 SERPINB1 (ENSMMSG00000001564) #35 WRNIP1 (ENSMMSG00000001591) #36 MYLK4 (ENSMMSG00000001649) GMDS (ENSMMSG00000001775) FOXC1 (ENSMMSG00000001806) Bovidae ANCESTRAL SPECIES 13 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.f.a.b.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Bovinae ANCESTRAL SPECIES 9 ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.e.b.b.a #27 ENSGT00940000154519.e.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 Bos ANCESTRAL SPECIES 37 ENSGT00950000185466 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.e.b.b.b.a #27 ENSGT00940000154519.e.b.b.a.c #27 ENSGT00940000154519.e.a.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Bos_a ANCESTRAL SPECIES 49 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.e.b.b.b.a #27 ENSGT00940000154519.e.b.b.a.c #27 ENSGT00940000154519.e.a.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b Domestic yak MODERN SPECIES 16 ENSBGRG00000007376 ENSBGRG00000007447 #9 SDCBP (ENSBGRG00000007518) PPP1R3G (ENSBGRG00000007602) #10 ENSBGRG00000007618 RPP40 (ENSBGRG00000007644) #11 CDYL (ENSBGRG00000007875) #12 ECI2 (ENSBGRG00000007960) #13 ENSBGRG00000008092 #15 FAM217A (ENSBGRG00000008153) #16 PRPF4B (ENSBGRG00000008304) #17 PXDC1 (ENSBGRG00000008589) #19 ENSBGRG00000008631 SLC22A23 (ENSBGRG00000008663) #20 ENSBGRG00000008779 #21 TUBB2A (ENSBGRG00000008862) #22 BPHL (ENSBGRG00000008956) #24 RIPK1 (ENSBGRG00000009042) #25 NQO2 (ENSBGRG00000009131) #26 ENSBGRG00000009235 #27 ENSBGRG00000009283 #27 ENSBGRG00000009409 #27 ENSBGRG00000010125 #27 SERPINB9 (ENSBGRG00000010171) #31 SERPINB1 (ENSBGRG00000010205) #35 WRNIP1 (ENSBGRG00000010299) #36 MYLK4 (ENSBGRG00000010518) GMDS (ENSBGRG00000011025) FOXC1 (ENSBGRG00000011734) FOXF2 (ENSBGRG00000011788) ENSBGRG00000011879 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #20 ENSBMUG00000009939 #22 ENSBMUG00000009950 #22 ENSBMUG00000009966 #22 BPHL (ENSBMUG00000009972) #24 RIPK1 (ENSBMUG00000009980) #25 NQO2 (ENSBMUG00000010004) #26 ENSBMUG00000010067 #27 Bos_b ANCESTRAL SPECIES 8 ENSGT00950000185466 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.e.b.b.b.a #27 ENSGT00940000154519.e.b.b.a.c #27 ENSGT00940000154519.e.a.a #27 ENSGT00940000154519.e.a.b #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Cow DUPLICATION Cow MODERN SPECIES 15 ENSBTAG00000049778 FARS2 (ENSBTAG00000018072) #8 LYRM4 (ENSBTAG00000031432) #9 ENSBTAG00000018309 PPP1R3G (ENSBTAG00000054777) #10 ENSBTAG00000051366 RPP40 (ENSBTAG00000003332) #11 CDYL (ENSBTAG00000016397) #12 ECI2 (ENSBTAG00000015178) #13 ENSBTAG00000015176 #15 FAM217A (ENSBTAG00000002089) #16 PRPF4B (ENSBTAG00000002086) #17 PXDC1 (ENSBTAG00000026919) #19 SLC22A23 (ENSBTAG00000010943) #20 PSMG4 (ENSBTAG00000031249) #21 TUBB2B (ENSBTAG00000054330) #22 TUBB2A (ENSBTAG00000048485) #22 BPHL (ENSBTAG00000006379) #24 RIPK1 (ENSBTAG00000006378) #25 ENSBTAG00000051842 NQO2 (ENSBTAG00000000786) #26 ENSBTAG00000049906 #27 ENSBTAG00000053741 #27 ENSBTAG00000054098 #27 SERPINB6 (ENSBTAG00000050155) #27 ENSBTAG00000053511 #27 SERPINB9 (ENSBTAG00000031267) #31 SERPINB1 (ENSBTAG00000011975) #35 WRNIP1 (ENSBTAG00000006166) #36 MYLK4 (ENSBTAG00000012079) GMDS (ENSBTAG00000012058) Cow MODERN SPECIES 15 FARS2 (ENSBTAG00000018072) #8 LYRM4 (ENSBTAG00000031432) #9 ENSBTAG00000018309 PPP1R3G (ENSBTAG00000054777) #10 ENSBTAG00000051366 RPP40 (ENSBTAG00000003332) #11 CDYL (ENSBTAG00000016397) #12 ECI2 (ENSBTAG00000015178) #13 ENSBTAG00000015176 #15 FAM217A (ENSBTAG00000002089) #16 PRPF4B (ENSBTAG00000002086) #17 PXDC1 (ENSBTAG00000026919) #19 SLC22A23 (ENSBTAG00000010943) #20 PSMG4 (ENSBTAG00000031249) #21 TUBB2B (ENSBTAG00000054330) #22 TUBB2A (ENSBTAG00000048485) #22 BPHL (ENSBTAG00000006379) #24 RIPK1 (ENSBTAG00000006378) #25 ENSBTAG00000051842 NQO2 (ENSBTAG00000000786) #26 ENSBTAG00000049906 #27 ENSBTAG00000053741 #27 ENSBTAG00000054098 #27 SERPINB6 (ENSBTAG00000050155) #27 ENSBTAG00000053511 #27 SERPINB9 (ENSBTAG00000031267) #31 SERPINB1 (ENSBTAG00000011975) #35 WRNIP1 (ENSBTAG00000006166) #36 MYLK4 (ENSBTAG00000012079) GMDS (ENSBTAG00000012058) ENSBTAG00000050875 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 15 LYRM4 (ENSBIXG00005026120) #9 ENSBIXG00005006186 PPP1R3G (ENSBIXG00005026071) #10 ENSBIXG00005026061 RPP40 (ENSBIXG00005026040) #11 CDYL (ENSBIXG00005004428) #12 ENSBIXG00005007197 ENSBIXG00005025934 ECI2 (ENSBIXG00005025904) #13 ENSBIXG00005025813 #15 FAM217A (ENSBIXG00005025792) #16 PRPF4B (ENSBIXG00005025750) #17 PXDC1 (ENSBIXG00005025631) #19 SLC22A23 (ENSBIXG00005004357) #20 PSMG4 (ENSBIXG00005025413) #21 TUBB2A (ENSBIXG00005025393) #22 ENSBIXG00005025336 #22 BPHL (ENSBIXG00005025316) #24 RIPK1 (ENSBIXG00005004294) #25 ENSBIXG00005025217 NQO2 (ENSBIXG00005025196) #26 ENSBIXG00005025063 #27 ENSBIXG00005024949 ENSBIXG00005024919 #27 SERPINB9 (ENSBIXG00005024704) #31 SERPINB1 (ENSBIXG00005024645) #35 WRNIP1 (ENSBIXG00005006680) #36 MYLK4 (ENSBIXG00005024549) GMDS (ENSBIXG00005024373) FOXF2 (ENSBIXG00005024208) FOXQ1 (ENSBIXG00005024190) Hybrid Bos Indicus MODERN SPECIES 15 ENSBIXG00005006186 PPP1R3G (ENSBIXG00005026071) #10 ENSBIXG00005026061 RPP40 (ENSBIXG00005026040) #11 CDYL (ENSBIXG00005004428) #12 ENSBIXG00005007197 ENSBIXG00005025934 ECI2 (ENSBIXG00005025904) #13 ENSBIXG00005025813 #15 FAM217A (ENSBIXG00005025792) #16 PRPF4B (ENSBIXG00005025750) #17 PXDC1 (ENSBIXG00005025631) #19 SLC22A23 (ENSBIXG00005004357) #20 PSMG4 (ENSBIXG00005025413) #21 TUBB2A (ENSBIXG00005025393) #22 ENSBIXG00005025336 #22 BPHL (ENSBIXG00005025316) #24 RIPK1 (ENSBIXG00005004294) #25 ENSBIXG00005025217 NQO2 (ENSBIXG00005025196) #26 ENSBIXG00005025063 #27 ENSBIXG00005024949 ENSBIXG00005024919 #27 SERPINB9 (ENSBIXG00005024704) #31 SERPINB1 (ENSBIXG00005024645) #35 WRNIP1 (ENSBIXG00005006680) #36 MYLK4 (ENSBIXG00005024549) GMDS (ENSBIXG00005024373) FOXF2 (ENSBIXG00005024208) FOXQ1 (ENSBIXG00005024190) EXOC2 (ENSBIXG00005002582) Caprinae ANCESTRAL SPECIES 41 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.e.b.a #27 ENSGT00940000154519.f.a.a.a.b #27 ENSGT00940000154931 #31 ENSGT00940000154519.f.a.a.a.a.a #27 ENSGT00940000154519.f.a.b.a #27 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 12 RREB1 (ENSOARG00020025006) LY86 (ENSOARG00020025014) F13A1 (ENSOARG00020025035) NRN1 (ENSOARG00020025044) #7 FARS2 (ENSOARG00020025055) #8 LYRM4 (ENSOARG00020025075) #9 PPP1R3G (ENSOARG00020025083) #10 RPP40 (ENSOARG00020025115) #11 CDYL (ENSOARG00020025174) #12 ENSOARG00020025197 #15 PRPF4B (ENSOARG00020025239) #17 ENSOARG00020025307 #19 SLC22A23 (ENSOARG00020006359) #20 TUBB2A (ENSOARG00020006431) #22 PSMG4 (ENSOARG00020006491) #21 TUBB2B (ENSOARG00020006539) #22 ENSOARG00020006586 RIPK1 (ENSOARG00020006661) #24 RIPK1 (ENSOARG00020006711) #25 ENSOARG00020006784 #26 ENSOARG00020006863 #27 ENSOARG00020007031 #27 ENSOARG00020008292 ENSOARG00020008345 #27 ENSOARG00020008440 #27 SERPINB9 (ENSOARG00020008599) #31 ENSOARG00020008634 #27 SERPINB1 (ENSOARG00020008679) #35 WRNIP1 (ENSOARG00020008718) #36 ENSOARG00020008839 ENSOARG00020009120 Rambouillet Sheep MODERN SPECIES 12 SSR1 (ENSOARG00020024975) ENSOARG00020024996 RREB1 (ENSOARG00020025006) LY86 (ENSOARG00020025014) F13A1 (ENSOARG00020025035) NRN1 (ENSOARG00020025044) #7 FARS2 (ENSOARG00020025055) #8 LYRM4 (ENSOARG00020025075) #9 PPP1R3G (ENSOARG00020025083) #10 RPP40 (ENSOARG00020025115) #11 CDYL (ENSOARG00020025174) #12 ENSOARG00020025197 #15 PRPF4B (ENSOARG00020025239) #17 ENSOARG00020025307 #19 SLC22A23 (ENSOARG00020006359) #20 TUBB2A (ENSOARG00020006431) #22 PSMG4 (ENSOARG00020006491) #21 TUBB2B (ENSOARG00020006539) #22 ENSOARG00020006586 RIPK1 (ENSOARG00020006661) #24 RIPK1 (ENSOARG00020006711) #25 ENSOARG00020006784 #26 ENSOARG00020006863 #27 ENSOARG00020007031 #27 ENSOARG00020008292 ENSOARG00020008345 #27 ENSOARG00020008440 #27 SERPINB9 (ENSOARG00020008599) #31 ENSOARG00020008634 #27 SERPINB1 (ENSOARG00020008679) #35 WRNIP1 (ENSOARG00020008718) #36 Goat DUPLICATION Goat MODERN SPECIES 15 NRN1 (ENSCHIG00000023169) #7 ENSCHIG00000017222 FARS2 (ENSCHIG00000017678) #8 LYRM4 (ENSCHIG00000010740) #9 PPP1R3G (ENSCHIG00000017990) #10 ENSCHIG00000022246 RPP40 (ENSCHIG00000016849) #11 CDYL (ENSCHIG00000021846) #12 ECI2 (ENSCHIG00000016201) #13 ENSCHIG00000021666 #15 ENSCHIG00000023235 #16 PRPF4B (ENSCHIG00000014208) #17 PXDC1 (ENSCHIG00000025104) #19 SLC22A23 (ENSCHIG00000013035) #20 PSMG4 (ENSCHIG00000018602) #21 TUBB2B (ENSCHIG00000021272) #22 TUBB2A (ENSCHIG00000025595) #22 BPHL (ENSCHIG00000018519) #24 RIPK1 (ENSCHIG00000026577) #25 NQO2 (ENSCHIG00000014702) #26 ENSCHIG00000020501 #27 ENSCHIG00000014090 #27 ENSCHIG00000013116 #27 HDGFL1 (ENSCHIG00000011655) ENSCHIG00000010444 ENSCHIG00000017218 SOX4 (ENSCHIG00000013419) CDKAL1 (ENSCHIG00000022647) ENSCHIG00000022931 ENSCHIG00000010662 MBOAT1 (ENSCHIG00000009573) Goat MODERN SPECIES 15 ENSCHIG00000017222 FARS2 (ENSCHIG00000017678) #8 LYRM4 (ENSCHIG00000010740) #9 PPP1R3G (ENSCHIG00000017990) #10 ENSCHIG00000022246 RPP40 (ENSCHIG00000016849) #11 CDYL (ENSCHIG00000021846) #12 ECI2 (ENSCHIG00000016201) #13 ENSCHIG00000021666 #15 ENSCHIG00000023235 #16 PRPF4B (ENSCHIG00000014208) #17 PXDC1 (ENSCHIG00000025104) #19 SLC22A23 (ENSCHIG00000013035) #20 PSMG4 (ENSCHIG00000018602) #21 TUBB2B (ENSCHIG00000021272) #22 TUBB2A (ENSCHIG00000025595) #22 BPHL (ENSCHIG00000018519) #24 RIPK1 (ENSCHIG00000026577) #25 NQO2 (ENSCHIG00000014702) #26 ENSCHIG00000020501 #27 ENSCHIG00000014090 #27 ENSCHIG00000013116 #27 HDGFL1 (ENSCHIG00000011655) ENSCHIG00000010444 ENSCHIG00000017218 SOX4 (ENSCHIG00000013419) CDKAL1 (ENSCHIG00000022647) ENSCHIG00000022931 ENSCHIG00000010662 MBOAT1 (ENSCHIG00000009573) ID4 (ENSCHIG00000020094) Suina ANCESTRAL SPECIES 8 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417.a.b ENSGT00940000154150.xb.s.b #22 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519 #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT01070000257212 ENSGT00390000010872 ENSGT00940000159059 Pig MODERN SPECIES 15 F13A1 (ENSSSCG00000024310) NRN1 (ENSSSCG00000026211) #7 FARS2 (ENSSSCG00000038717) #8 LYRM4 (ENSSSCG00000031269) #9 PPP1R3G (ENSSSCG00000000997) #10 RPP40 (ENSSSCG00000000998) #11 CDYL (ENSSSCG00000000999) #12 ECI2 (ENSSSCG00000001000) #13 ENSSSCG00000001001 #15 PRPF4B (ENSSSCG00000001002) #17 FAM50B (ENSSSCG00000026323) #18 PXDC1 (ENSSSCG00000025582) #19 SLC22A23 (ENSSSCG00000001004) #20 ENSSSCG00000036988 TUBB2B (ENSSSCG00000033655) #22 TUBB2A (ENSSSCG00000062050) #22 BPHL (ENSSSCG00000001008) #24 RIPK1 (ENSSSCG00000001009) #25 NQO2 (ENSSSCG00000020758) #26 ENSSSCG00000038404 #27 SERPINB9 (ENSSSCG00000031615) #31 SERPINB1 (ENSSSCG00000001011) #35 WRNIP1 (ENSSSCG00000001010) #36 ENSSSCG00000028777 FOXC1 (ENSSSCG00000039756) GMDS (ENSSSCG00000000994) FOXF2 (ENSSSCG00000037195) FOXQ1 (ENSSSCG00000000991) ENSSSCG00000059227 ENSSSCG00000041494 EXOC2 (ENSSSCG00000000985) Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 780 ENSCWAG00000009446 #22 TUBB2A (ENSCWAG00000010033) #22 BPHL (ENSCWAG00000010053) #24 RIPK1 (ENSCWAG00000010115) #25 NQO2 (ENSCWAG00000010221) #26 ENSCWAG00000010295 #27 SERPINB9 (ENSCWAG00000010349) #31 SERPINB1 (ENSCWAG00000010393) #35 WRNIP1 (ENSCWAG00000010435) #36 MYLK4 (ENSCWAG00000010554) GMDS (ENSCWAG00000010697) Chacoan peccary MODERN SPECIES 780 ENSCWAG00000009446 #22 TUBB2A (ENSCWAG00000010033) #22 BPHL (ENSCWAG00000010053) #24 RIPK1 (ENSCWAG00000010115) #25 NQO2 (ENSCWAG00000010221) #26 ENSCWAG00000010295 #27 SERPINB9 (ENSCWAG00000010349) #31 SERPINB1 (ENSCWAG00000010393) #35 WRNIP1 (ENSCWAG00000010435) #36 MYLK4 (ENSCWAG00000010554) GMDS (ENSCWAG00000010697) Atlantogenata ANCESTRAL SPECIES 86 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000168960 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.j #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Xenarthra ANCESTRAL SPECIES 531 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000174583 ENSGT00940000156563 #26 ENSGT00940000154519.j #27 ENSGT00940000154931.h #31 Armadillo DUPLICATION Armadillo MODERN SPECIES 2012 ENSDNOG00000041366 #22 Armadillo MODERN SPECIES 4572 CD200 (ENSDNOG00000004455) ENSDNOG00000035110 SLC9C1 (ENSDNOG00000006265) ENSDNOG00000011769 C3orf52 (ENSDNOG00000032086) TAGLN3 (ENSDNOG00000046524) ABHD10 (ENSDNOG00000044065) PHLDB2 (ENSDNOG00000013616) PLCXD2 (ENSDNOG00000025935) SLC22A23 (ENSDNOG00000030775) #20 PSMG4 (ENSDNOG00000010146) #21 ENSDNOG00000006449 #22 ENSDNOG00000010566 #22 BPHL (ENSDNOG00000004617) #24 ENSDNOG00000030682 NQO2 (ENSDNOG00000031821) #26 ENSDNOG00000048294 #27 ENSDNOG00000004180 #31 Armadillo MODERN SPECIES 4572 CD200 (ENSDNOG00000004455) ENSDNOG00000035110 SLC9C1 (ENSDNOG00000006265) ENSDNOG00000011769 C3orf52 (ENSDNOG00000032086) TAGLN3 (ENSDNOG00000046524) ABHD10 (ENSDNOG00000044065) PHLDB2 (ENSDNOG00000013616) PLCXD2 (ENSDNOG00000025935) SLC22A23 (ENSDNOG00000030775) #20 PSMG4 (ENSDNOG00000010146) #21 ENSDNOG00000006449 #22 ENSDNOG00000010566 #22 BPHL (ENSDNOG00000004617) #24 ENSDNOG00000030682 NQO2 (ENSDNOG00000031821) #26 ENSDNOG00000048294 #27 ENSDNOG00000004180 #31 Afrotheria ANCESTRAL SPECIES 94 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000168960 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167514 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.i.a.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Tenrec MODERN SPECIES 3324 TUBB2A (ENSETEG00000006085) #22 Afrotheria_a ANCESTRAL SPECIES 96 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000168960 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B #18 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167514 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000154519.i.a.a #27 ENSGT00940000154931 #31 ENSGT00940000154573 #35 ENSGT00390000008538 #36 ENSGT00940000156211.b ENSGT00440000033640 ENSGT00940000162303.b ENSGT00940000162527 ENSGT00940000162937.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Hyrax MODERN SPECIES 2720 ENSPCAG00000002925 #22 Elephant DUPLICATION Elephant DUPLICATION Elephant MODERN SPECIES 447 NRN1 (ENSLAFG00000012437) #7 FARS2 (ENSLAFG00000007104) #8 LYRM4 (ENSLAFG00000020549) #9 PPP1R3G (ENSLAFG00000031926) #10 RPP40 (ENSLAFG00000007530) #11 CDYL (ENSLAFG00000018419) #12 ECI2 (ENSLAFG00000000020) #13 ENSLAFG00000027067 FAM217A (ENSLAFG00000022708) #16 ENSLAFG00000027337 PRPF4B (ENSLAFG00000004109) #17 FAM50B (ENSLAFG00000006170) #18 PXDC1 (ENSLAFG00000018619) #19 SLC22A23 (ENSLAFG00000012205) #20 ENSLAFG00000032203 ENSLAFG00000027462 #22 ENSLAFG00000031279 #22 ENSLAFG00000010068 #22 BPHL (ENSLAFG00000010064) #24 RIPK1 (ENSLAFG00000010059) #25 NQO2 (ENSLAFG00000031167) #26 ENSLAFG00000011947 #27 SERPINB9 (ENSLAFG00000007487) #31 SERPINB1 (ENSLAFG00000006794) #35 WRNIP1 (ENSLAFG00000014603) #36 MYLK4 (ENSLAFG00000014597) GMDS (ENSLAFG00000012336) ENSLAFG00000029094 FOXC1 (ENSLAFG00000028626) FOXF2 (ENSLAFG00000002074) FOXQ1 (ENSLAFG00000000082) Elephant MODERN SPECIES 447 LYRM4 (ENSLAFG00000020549) #9 PPP1R3G (ENSLAFG00000031926) #10 RPP40 (ENSLAFG00000007530) #11 CDYL (ENSLAFG00000018419) #12 ECI2 (ENSLAFG00000000020) #13 ENSLAFG00000027067 FAM217A (ENSLAFG00000022708) #16 ENSLAFG00000027337 PRPF4B (ENSLAFG00000004109) #17 FAM50B (ENSLAFG00000006170) #18 PXDC1 (ENSLAFG00000018619) #19 SLC22A23 (ENSLAFG00000012205) #20 ENSLAFG00000032203 ENSLAFG00000027462 #22 ENSLAFG00000031279 #22 ENSLAFG00000010068 #22 BPHL (ENSLAFG00000010064) #24 RIPK1 (ENSLAFG00000010059) #25 NQO2 (ENSLAFG00000031167) #26 ENSLAFG00000011947 #27 SERPINB9 (ENSLAFG00000007487) #31 SERPINB1 (ENSLAFG00000006794) #35 WRNIP1 (ENSLAFG00000014603) #36 MYLK4 (ENSLAFG00000014597) GMDS (ENSLAFG00000012336) ENSLAFG00000029094 FOXC1 (ENSLAFG00000028626) FOXF2 (ENSLAFG00000002074) FOXQ1 (ENSLAFG00000000082) ENSLAFG00000030668 EXOC2 (ENSLAFG00000012946) Elephant MODERN SPECIES 447 FARS2 (ENSLAFG00000007104) #8 LYRM4 (ENSLAFG00000020549) #9 PPP1R3G (ENSLAFG00000031926) #10 RPP40 (ENSLAFG00000007530) #11 CDYL (ENSLAFG00000018419) #12 ECI2 (ENSLAFG00000000020) #13 ENSLAFG00000027067 FAM217A (ENSLAFG00000022708) #16 ENSLAFG00000027337 PRPF4B (ENSLAFG00000004109) #17 FAM50B (ENSLAFG00000006170) #18 PXDC1 (ENSLAFG00000018619) #19 SLC22A23 (ENSLAFG00000012205) #20 ENSLAFG00000032203 ENSLAFG00000027462 #22 ENSLAFG00000031279 #22 ENSLAFG00000010068 #22 BPHL (ENSLAFG00000010064) #24 RIPK1 (ENSLAFG00000010059) #25 NQO2 (ENSLAFG00000031167) #26 ENSLAFG00000011947 #27 SERPINB9 (ENSLAFG00000007487) #31 SERPINB1 (ENSLAFG00000006794) #35 WRNIP1 (ENSLAFG00000014603) #36 MYLK4 (ENSLAFG00000014597) GMDS (ENSLAFG00000012336) ENSLAFG00000029094 FOXC1 (ENSLAFG00000028626) FOXF2 (ENSLAFG00000002074) FOXQ1 (ENSLAFG00000000082) ENSLAFG00000030668 Marsupialia ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563.f #26 ENSGT00940000156563.e #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000162917 ENSGT00390000002200.a.b Opossum MODERN SPECIES 2 ENSMODG00000042097 #7 FARS2 (ENSMODG00000009839) #8 ENSMODG00000042735 #9 ENSMODG00000049736 #10 RPP40 (ENSMODG00000009826) #11 ENSMODG00000009804 #12 ENSMODG00000027364 ECI2 (ENSMODG00000009786) #13 ENSMODG00000036689 #15 FAM217A (ENSMODG00000009773) #16 ENSMODG00000009756 #17 ENSMODG00000028179 PXDC1 (ENSMODG00000008942) #19 SLC22A23 (ENSMODG00000008782) #20 PSMG4 (ENSMODG00000038283) #21 TUBB2A (ENSMODG00000024592) #22 BPHL (ENSMODG00000008512) #24 RIPK1 (ENSMODG00000008505) #25 ENSMODG00000008493 #26 ENSMODG00000046608 #26 DUSP22 (ENSMODG00000050834) IRF4 (ENSMODG00000008383) EXOC2 (ENSMODG00000008367) ENSMODG00000008316 FOXF2 (ENSMODG00000008307) ENSMODG00000008294 ENSMODG00000024590 GMDS (ENSMODG00000008260) ENSMODG00000028941 WRNIP1 (ENSMODG00000008193) #36 ENSMODG00000047146 Marsupialia_b ANCESTRAL SPECIES 2 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563.f #26 ENSGT00940000157153.u ENSGT00940000156563.e #26 ENSGT00940000157153.v.b ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000162917 Diprotodontia ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563.f #26 ENSGT00940000157153.u ENSGT00940000156563.e #26 ENSGT00940000157153.v.b ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000162917 Wallaby DUPLICATION Wallaby MODERN SPECIES 11194 TUBB2B (ENSMEUG00000012226) #22 Wallaby MODERN SPECIES 4396 TUBB2A (ENSMEUG00000003738) #22 ENSMEUG00000003729 #24 Diprotodontia_a ANCESTRAL SPECIES ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563.f #26 ENSGT00940000157153.u ENSGT00940000156563.e #26 ENSGT00940000157153.v.b ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00530000063786.a.p koala MODERN SPECIES 296 SLC22A23 (ENSPCIG00000000903) #20 ENSPCIG00000000888 TUBB2B (ENSPCIG00000022050) #22 BPHL (ENSPCIG00000022052) #24 RIPK1 (ENSPCIG00000022064) #25 ENSPCIG00000012249 #26 ENSPCIG00000022067 #26 DUSP22 (ENSPCIG00000037144) IRF4 (ENSPCIG00000022070) EXOC2 (ENSPCIG00000022073) FOXQ1 (ENSPCIG00000007926) FOXF2 (ENSPCIG00000011639) FOXC1 (ENSPCIG00000035615) Common wonbat MODERN SPECIES 34 FARS2 (ENSVURG00010004338) #8 LYRM4 (ENSVURG00010004361) #9 ENSVURG00010004367 #10 RPP40 (ENSVURG00010004377) #11 ENSVURG00010004414 #12 ENSVURG00010004422 ENSVURG00010004427 ENSVURG00010004444 ECI2 (ENSVURG00010004465) #13 FAM217A (ENSVURG00010004476) #16 PRPF4B (ENSVURG00010004483) #17 ENSVURG00010004506 PXDC1 (ENSVURG00010004534) #19 SLC22A23 (ENSVURG00010004586) #20 PSMG4 (ENSVURG00010004617) #21 TUBB2A (ENSVURG00010004658) #22 BPHL (ENSVURG00010004675) #24 RIPK1 (ENSVURG00010004694) #25 ENSVURG00010004709 #26 ENSVURG00010004723 IRF4 (ENSVURG00010004732) EXOC2 (ENSVURG00010004782) FOXF2 (ENSVURG00010004836) FOXC1 (ENSVURG00010004905) GMDS (ENSVURG00010004946) ENSVURG00010004983 MYLK4 (ENSVURG00010005033) WRNIP1 (ENSVURG00010005089) #36 ENSVURG00010005123 ENSVURG00010005129 PSKH2 (ENSVURG00010005146) Tasmanian devil DUPLICATION Tasmanian devil MODERN SPECIES NRN1 (ENSSHAG00000020937) #7 FARS2 (ENSSHAG00000026087) #8 PPP1R3G (ENSSHAG00000025505) #10 ENSSHAG00000007760 RPP40 (ENSSHAG00000002102) #11 ENSSHAG00000008802 #12 ECI2 (ENSSHAG00000031929) #13 ENSSHAG00000006576 #15 ENSSHAG00000007175 #16 PRPF4B (ENSSHAG00000007603) #17 ENSSHAG00000028945 PXDC1 (ENSSHAG00000009869) #19 ENSSHAG00000029443 SLC22A23 (ENSSHAG00000023393) #20 PSMG4 (ENSSHAG00000030196) #21 TUBB2B (ENSSHAG00000007892) #22 TUBB2A (ENSSHAG00000021520) #22 BPHL (ENSSHAG00000014312) #24 RIPK1 (ENSSHAG00000014446) #25 ENSSHAG00000014609 #26 ENSSHAG00000015165 ENSSHAG00000022026 #26 IRF4 (ENSSHAG00000015592) EXOC2 (ENSSHAG00000001430) FOXQ1 (ENSSHAG00000012341) FOXF2 (ENSSHAG00000012720) FOXC1 (ENSSHAG00000023841) GMDS (ENSSHAG00000031057) MYLK4 (ENSSHAG00000026920) ENSSHAG00000014703 #36 ENSSHAG00000025112 Tasmanian devil MODERN SPECIES FARS2 (ENSSHAG00000026087) #8 PPP1R3G (ENSSHAG00000025505) #10 ENSSHAG00000007760 RPP40 (ENSSHAG00000002102) #11 ENSSHAG00000008802 #12 ECI2 (ENSSHAG00000031929) #13 ENSSHAG00000006576 #15 ENSSHAG00000007175 #16 PRPF4B (ENSSHAG00000007603) #17 ENSSHAG00000028945 PXDC1 (ENSSHAG00000009869) #19 ENSSHAG00000029443 SLC22A23 (ENSSHAG00000023393) #20 PSMG4 (ENSSHAG00000030196) #21 TUBB2B (ENSSHAG00000007892) #22 TUBB2A (ENSSHAG00000021520) #22 BPHL (ENSSHAG00000014312) #24 RIPK1 (ENSSHAG00000014446) #25 ENSSHAG00000014609 #26 ENSSHAG00000015165 ENSSHAG00000022026 #26 IRF4 (ENSSHAG00000015592) EXOC2 (ENSSHAG00000001430) FOXQ1 (ENSSHAG00000012341) FOXF2 (ENSSHAG00000012720) FOXC1 (ENSSHAG00000023841) GMDS (ENSSHAG00000031057) MYLK4 (ENSSHAG00000026920) ENSSHAG00000014703 #36 ENSSHAG00000025112 ENSSHAG00000031754 Platypus DUPLICATION Platypus MODERN SPECIES 23 ENSOANG00000037725 SSR1Y (ENSOANG00000048793) ENSOANG00000048797 ENSOANG00000041525 #12 ENSOANG00000014951 #17 ENSOANG00000014953 #20 ENSOANG00000031691 #21 TUBB2B (ENSOANG00000047005) #22 ENSOANG00000036177 #24 ENSOANG00000039611 ENSOANG00000040013 #25 ENSOANG00000041660 #26 ENSOANG00000044106 ENSOANG00000050518 ENSOANG00000042886 ENSOANG00000039862 ENSOANG00000036916 Platypus MODERN SPECIES 86 ENSOANG00000032215 ENSOANG00000031552 F13A1 (ENSOANG00000045613) NRN1 (ENSOANG00000039068) #7 FARS2 (ENSOANG00000001199) #8 ENSOANG00000050753 #9 RPP40 (ENSOANG00000001200) #11 ENSOANG00000001201 #12 ECI2 (ENSOANG00000043493) #13 ENSOANG00000047145 #15 ENSOANG00000050718 #17 ENSOANG00000028882 PXDC1 (ENSOANG00000050046) #19 ENSOANG00000044215 #20 ENSOANG00000040291 #21 ENSOANG00000004797 #22 ENSOANG00000014956 #24 ENSOANG00000014957 #25 ENSOANG00000014959 #26 ENSOANG00000014901 ENSOANG00000006326 ENSOANG00000006327 ENSOANG00000041195 ENSOANG00000041907 GMDS (ENSOANG00000029425) ENSOANG00000044472 WRNIP1 (ENSOANG00000015739) #36 ENSOANG00000015740 DROSHA (ENSOANG00000015744) CDH6 (ENSOANG00000015746) CDH9 (ENSOANG00000002505) Sauria ANCESTRAL SPECIES ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C Archelosauria ANCESTRAL SPECIES 5 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915 Cryptodira ANCESTRAL SPECIES 7 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915 Testudinoidea ANCESTRAL SPECIES ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C.p.a ENSGT00940000165915 Emydidae ANCESTRAL SPECIES ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C.p.a ENSGT00940000165915 ENSGT00940000161205 Three-toed box turtle DUPLICATION Three-toed box turtle MODERN SPECIES 2589 ENSTMTG00000009713 #22 Three-toed box turtle MODERN SPECIES 2610 ENSTMTG00000010082 #22 painted turtle DUPLICATION painted turtle MODERN SPECIES 2427 ENSCPBG00000008989 ENSCPBG00000008999 PPP1R3G (ENSCPBG00000009001) #10 RPP40 (ENSCPBG00000009003) #11 ENSCPBG00000009008 #12 ECI2 (ENSCPBG00000009023) #13 FAM217A (ENSCPBG00000009034) #16 ENSCPBG00000009043 #17 ENSCPBG00000009044 ENSCPBG00000009048 PXDC1 (ENSCPBG00000009051) #19 ENSCPBG00000009054 SLC22A23 (ENSCPBG00000009061) #20 PSMG4 (ENSCPBG00000009067) #21 ENSCPBG00000009070 #22 ENSCPBG00000009079 #22 BPHL (ENSCPBG00000009096) #24 RIPK1 (ENSCPBG00000009112) #25 IRF4 (ENSCPBG00000009145) EXOC2 (ENSCPBG00000009169) FOXQ1 (ENSCPBG00000009662) FOXF2 (ENSCPBG00000009665) FOXC1 (ENSCPBG00000009668) GMDS (ENSCPBG00000009672) MYLK4 (ENSCPBG00000009690) WRNIP1 (ENSCPBG00000009703) #36 SERPINB1 (ENSCPBG00000009708) #35 ENSCPBG00000009713 ENSCPBG00000009720 ENSCPBG00000009765 ENSCPBG00000010925 painted turtle MODERN SPECIES 2427 FARS2 (ENSCPBG00000008751) #8 ENSCPBG00000008989 ENSCPBG00000008999 PPP1R3G (ENSCPBG00000009001) #10 RPP40 (ENSCPBG00000009003) #11 ENSCPBG00000009008 #12 ECI2 (ENSCPBG00000009023) #13 FAM217A (ENSCPBG00000009034) #16 ENSCPBG00000009043 #17 ENSCPBG00000009044 ENSCPBG00000009048 PXDC1 (ENSCPBG00000009051) #19 ENSCPBG00000009054 SLC22A23 (ENSCPBG00000009061) #20 PSMG4 (ENSCPBG00000009067) #21 ENSCPBG00000009070 #22 ENSCPBG00000009079 #22 BPHL (ENSCPBG00000009096) #24 RIPK1 (ENSCPBG00000009112) #25 IRF4 (ENSCPBG00000009145) EXOC2 (ENSCPBG00000009169) FOXQ1 (ENSCPBG00000009662) FOXF2 (ENSCPBG00000009665) FOXC1 (ENSCPBG00000009668) GMDS (ENSCPBG00000009672) MYLK4 (ENSCPBG00000009690) WRNIP1 (ENSCPBG00000009703) #36 SERPINB1 (ENSCPBG00000009708) #35 ENSCPBG00000009713 ENSCPBG00000009720 ENSCPBG00000009765 Testudinidae DUPLICATION Testudinidae DUPLICATION Testudinidae ANCESTRAL SPECIES 4 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.n #22 ENSGT00940000154150.m.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00940000174615 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C.p.a ENSGT00940000165915 Goode s thornscrub tortoise MODERN SPECIES 11 NRN1 (ENSGEVG00005000507) #7 FARS2 (ENSGEVG00005000493) #8 ENSGEVG00005000479 LYRM4 (ENSGEVG00005000460) #9 PPP1R3G (ENSGEVG00005000436) #10 RPP40 (ENSGEVG00005000417) #11 ENSGEVG00005000394 #12 ECI2 (ENSGEVG00005000363) #13 FAM217A (ENSGEVG00005000347) #16 PRPF4B (ENSGEVG00005000196) #17 ENSGEVG00005000106 PXDC1 (ENSGEVG00005000084) #19 SLC22A23 (ENSGEVG00005000069) #20 PSMG4 (ENSGEVG00005000058) #21 ENSGEVG00005000037 #22 ENSGEVG00005006301 #22 BPHL (ENSGEVG00005006271) #24 RIPK1 (ENSGEVG00005006245) #25 NQO2 (ENSGEVG00005006223) #26 ENSGEVG00005006207 DUSP22 (ENSGEVG00005006150) IRF4 (ENSGEVG00005006121) EXOC2 (ENSGEVG00005006088) FOXF2 (ENSGEVG00005006060) FOXC1 (ENSGEVG00005006039) ENSGEVG00005006016 GMDS (ENSGEVG00005005964) MYLK4 (ENSGEVG00005005851) WRNIP1 (ENSGEVG00005005814) #36 SERPINB1 (ENSGEVG00005005167) #35 ENSGEVG00005004941 Abingdon island giant tortoise MODERN SPECIES 2039 ECI2 (ENSCABG00000020580) #13 FAM217A (ENSCABG00000020579) #16 PRPF4B (ENSCABG00000020578) #17 PXDC1 (ENSCABG00000020577) #19 SLC22A23 (ENSCABG00000020576) #20 PSMG4 (ENSCABG00000020575) #21 ENSCABG00000020574 TUBB2A (ENSCABG00000020573) #22 ENSCABG00000020572 #22 BPHL (ENSCABG00000020571) #24 ENSCABG00000020569 RIPK1 (ENSCABG00000020568) #25 NQO2 (ENSCABG00000020567) #26 DUSP22 (ENSCABG00000020565) IRF4 (ENSCABG00000020564) EXOC2 (ENSCABG00000020305) FOXF2 (ENSCABG00000020267) Testudinidae ANCESTRAL SPECIES ENSGT00940000154150.m.b #22 Goode s thornscrub tortoise MODERN SPECIES 11 F13A1 (ENSGEVG00005000527) NRN1 (ENSGEVG00005000507) #7 FARS2 (ENSGEVG00005000493) #8 ENSGEVG00005000479 LYRM4 (ENSGEVG00005000460) #9 PPP1R3G (ENSGEVG00005000436) #10 RPP40 (ENSGEVG00005000417) #11 ENSGEVG00005000394 #12 ECI2 (ENSGEVG00005000363) #13 FAM217A (ENSGEVG00005000347) #16 PRPF4B (ENSGEVG00005000196) #17 ENSGEVG00005000106 PXDC1 (ENSGEVG00005000084) #19 SLC22A23 (ENSGEVG00005000069) #20 PSMG4 (ENSGEVG00005000058) #21 ENSGEVG00005000037 #22 ENSGEVG00005006301 #22 BPHL (ENSGEVG00005006271) #24 RIPK1 (ENSGEVG00005006245) #25 NQO2 (ENSGEVG00005006223) #26 ENSGEVG00005006207 DUSP22 (ENSGEVG00005006150) IRF4 (ENSGEVG00005006121) EXOC2 (ENSGEVG00005006088) FOXF2 (ENSGEVG00005006060) FOXC1 (ENSGEVG00005006039) ENSGEVG00005006016 GMDS (ENSGEVG00005005964) MYLK4 (ENSGEVG00005005851) WRNIP1 (ENSGEVG00005005814) #36 SERPINB1 (ENSGEVG00005005167) #35 Testudinidae ANCESTRAL SPECIES 4 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150.n #22 ENSGT00940000154150.m.a #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00940000174615 ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C.p.a Abingdon island giant tortoise MODERN SPECIES 2039 ECI2 (ENSCABG00000020580) #13 FAM217A (ENSCABG00000020579) #16 PRPF4B (ENSCABG00000020578) #17 PXDC1 (ENSCABG00000020577) #19 SLC22A23 (ENSCABG00000020576) #20 PSMG4 (ENSCABG00000020575) #21 ENSCABG00000020574 TUBB2A (ENSCABG00000020573) #22 ENSCABG00000020572 #22 BPHL (ENSCABG00000020571) #24 ENSCABG00000020569 RIPK1 (ENSCABG00000020568) #25 NQO2 (ENSCABG00000020567) #26 DUSP22 (ENSCABG00000020565) IRF4 (ENSCABG00000020564) EXOC2 (ENSCABG00000020305) FOXF2 (ENSCABG00000020267) Chinese turtle DUPLICATION Chinese turtle MODERN SPECIES 2232 ENSPSIG00000000639 LY86 (ENSPSIG00000007069) F13A1 (ENSPSIG00000007111) NRN1 (ENSPSIG00000007743) #7 FARS2 (ENSPSIG00000007752) #8 ENSPSIG00000000655 RPP40 (ENSPSIG00000007854) #11 ENSPSIG00000007881 #12 ECI2 (ENSPSIG00000008142) #13 FAM217A (ENSPSIG00000008371) #16 PRPF4B (ENSPSIG00000008502) #17 SLC22A23 (ENSPSIG00000009072) #20 PXDC1 (ENSPSIG00000009675) #19 PSMG4 (ENSPSIG00000009729) #21 TUBB2B (ENSPSIG00000010016) #22 ENSPSIG00000010210 #22 BPHL (ENSPSIG00000010301) #24 RIPK1 (ENSPSIG00000010708) #25 NQO2 (ENSPSIG00000011276) #26 DUSP22 (ENSPSIG00000011481) IRF4 (ENSPSIG00000011619) EXOC2 (ENSPSIG00000011950) FOXF2 (ENSPSIG00000004712) GMDS (ENSPSIG00000004891) ENSPSIG00000004958 Chinese turtle MODERN SPECIES 2232 RREB1 (ENSPSIG00000006582) ENSPSIG00000000639 LY86 (ENSPSIG00000007069) F13A1 (ENSPSIG00000007111) NRN1 (ENSPSIG00000007743) #7 FARS2 (ENSPSIG00000007752) #8 ENSPSIG00000000655 RPP40 (ENSPSIG00000007854) #11 ENSPSIG00000007881 #12 ECI2 (ENSPSIG00000008142) #13 FAM217A (ENSPSIG00000008371) #16 PRPF4B (ENSPSIG00000008502) #17 SLC22A23 (ENSPSIG00000009072) #20 PXDC1 (ENSPSIG00000009675) #19 PSMG4 (ENSPSIG00000009729) #21 TUBB2B (ENSPSIG00000010016) #22 ENSPSIG00000010210 #22 BPHL (ENSPSIG00000010301) #24 RIPK1 (ENSPSIG00000010708) #25 NQO2 (ENSPSIG00000011276) #26 DUSP22 (ENSPSIG00000011481) IRF4 (ENSPSIG00000011619) EXOC2 (ENSPSIG00000011950) FOXF2 (ENSPSIG00000004712) GMDS (ENSPSIG00000004891) ENSPSIG00000004958 Archosauria ANCESTRAL SPECIES ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915 Australian saltwater crocodile DUPLICATION Australian saltwater crocodile MODERN SPECIES LY86 (ENSCPRG00005001383) F13A1 (ENSCPRG00005001285) NRN1 (ENSCPRG00005001282) #7 FARS2 (ENSCPRG00005001193) #8 LYRM4 (ENSCPRG00005001108) #9 RPP40 (ENSCPRG00005001044) #11 ENSCPRG00005001031 #12 ECI2 (ENSCPRG00005000853) #13 ENSCPRG00005000847 FAM217A (ENSCPRG00005000840) #16 PRPF4B (ENSCPRG00005000821) #17 PXDC1 (ENSCPRG00005000666) #19 SLC22A23 (ENSCPRG00005000653) #20 PSMG4 (ENSCPRG00005000572) #21 ENSCPRG00005000567 #22 ENSCPRG00005000564 #22 BPHL (ENSCPRG00005000493) #24 RIPK1 (ENSCPRG00005000470) #25 NQO2 (ENSCPRG00005000381) #26 DUSP22 (ENSCPRG00005000375) IRF4 (ENSCPRG00005000341) EXOC2 (ENSCPRG00005000238) FOXF2 (ENSCPRG00005017746) ENSCPRG00005017733 GMDS (ENSCPRG00005017730) MYLK4 (ENSCPRG00005017700) WRNIP1 (ENSCPRG00005017695) #36 SERPINB1 (ENSCPRG00005017691) #35 SERPINB8 (ENSCPRG00005017689) ENSCPRG00005017585 SERPINB10 (ENSCPRG00005017554) Australian saltwater crocodile MODERN SPECIES RREB1 (ENSCPRG00005001486) LY86 (ENSCPRG00005001383) F13A1 (ENSCPRG00005001285) NRN1 (ENSCPRG00005001282) #7 FARS2 (ENSCPRG00005001193) #8 LYRM4 (ENSCPRG00005001108) #9 RPP40 (ENSCPRG00005001044) #11 ENSCPRG00005001031 #12 ECI2 (ENSCPRG00005000853) #13 ENSCPRG00005000847 FAM217A (ENSCPRG00005000840) #16 PRPF4B (ENSCPRG00005000821) #17 PXDC1 (ENSCPRG00005000666) #19 SLC22A23 (ENSCPRG00005000653) #20 PSMG4 (ENSCPRG00005000572) #21 ENSCPRG00005000567 #22 ENSCPRG00005000564 #22 BPHL (ENSCPRG00005000493) #24 RIPK1 (ENSCPRG00005000470) #25 NQO2 (ENSCPRG00005000381) #26 DUSP22 (ENSCPRG00005000375) IRF4 (ENSCPRG00005000341) EXOC2 (ENSCPRG00005000238) FOXF2 (ENSCPRG00005017746) ENSCPRG00005017733 GMDS (ENSCPRG00005017730) MYLK4 (ENSCPRG00005017700) WRNIP1 (ENSCPRG00005017695) #36 SERPINB1 (ENSCPRG00005017691) #35 SERPINB8 (ENSCPRG00005017689) ENSCPRG00005017585 Aves ANCESTRAL SPECIES 24 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a African ostrich MODERN SPECIES 726 ENSSCUG00000010744 SSR1 (ENSSCUG00000010751) RREB1 (ENSSCUG00000010760) LY86 (ENSSCUG00000010764) F13A1 (ENSSCUG00000010770) NRN1 (ENSSCUG00000010777) #7 FARS2 (ENSSCUG00000010782) #8 ENSSCUG00000010786 RPP40 (ENSSCUG00000010789) #11 ENSSCUG00000010792 #12 ECI2 (ENSSCUG00000010805) #13 PRPF4B (ENSSCUG00000010810) #17 PXDC1 (ENSSCUG00000010818) #19 SLC22A23 (ENSSCUG00000010819) #20 ENSSCUG00000010821 TUBB2B (ENSSCUG00000010826) #22 BPHL (ENSSCUG00000010828) #24 RIPK1 (ENSSCUG00000010831) #25 NQO2 (ENSSCUG00000010834) #26 ENSSCUG00000010837 ENSSCUG00000010839 IRF4 (ENSSCUG00000010840) EXOC2 (ENSSCUG00000010844) GMDS (ENSSCUG00000010849) MYLK4 (ENSSCUG00000010853) WRNIP1 (ENSSCUG00000010857) #36 SERPINB1 (ENSSCUG00000010864) #35 SERPINB8 (ENSSCUG00000010867) ENSSCUG00000010870 ENSSCUG00000010873 SERPINB5 (ENSSCUG00000010876) Neognathae ANCESTRAL SPECIES ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Neognathae_b ANCESTRAL SPECIES 3 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Neognathae_c ANCESTRAL SPECIES 1 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Golden eagle MODERN SPECIES 9 SSR1 (ENSACCG00020012841) RREB1 (ENSACCG00020012781) LY86 (ENSACCG00020012756) F13A1 (ENSACCG00020012719) NRN1 (ENSACCG00020012698) #7 FARS2 (ENSACCG00020012651) #8 ENSACCG00020012608 #9 PPP1R3G (ENSACCG00020012576) #10 RPP40 (ENSACCG00020012532) #11 ENSACCG00020012468 #12 ECI2 (ENSACCG00020012393) #13 PRPF4B (ENSACCG00020012258) #17 PXDC1 (ENSACCG00020012218) #19 SLC22A23 (ENSACCG00020012173) #20 PSMG4 (ENSACCG00020012113) #21 ENSACCG00020012081 #22 BPHL (ENSACCG00020011982) #24 RIPK1 (ENSACCG00020011942) #25 NQO2 (ENSACCG00020011913) #26 DUSP22 (ENSACCG00020011886) IRF4 (ENSACCG00020011853) EXOC2 (ENSACCG00020011786) FOXQ1 (ENSACCG00020011745) FOXF2 (ENSACCG00020011731) FOXC1 (ENSACCG00020011716) GMDS (ENSACCG00020011687) MYLK4 (ENSACCG00020011621) WRNIP1 (ENSACCG00020011491) #36 SERPINB1 (ENSACCG00020016192) #35 SERPINB8 (ENSACCG00020016184) ENSACCG00020016175 Kakapo DUPLICATION Kakapo MODERN SPECIES APCDD1 (ENSSHBG00005006347) VAPA (ENSSHBG00005006288) RAB31 (ENSSHBG00005006263) PPP4R1 (ENSSHBG00005006216) ENSSHBG00005006189 RALBP1 (ENSSHBG00005006172) TWSG1 (ENSSHBG00005006144) ANKRD12 (ENSSHBG00005006105) NDUFV2 (ENSSHBG00005006080) MTCL1 (ENSSHBG00005005903) RAB12 (ENSSHBG00005000650) ENSSHBG00005000649 SLC22A23 (ENSSHBG00005004433) #20 PSMG4 (ENSSHBG00005004425) #21 ENSSHBG00005004422 #22 ENSSHBG00005004411 #22 BPHL (ENSSHBG00005004398) #24 RIPK1 (ENSSHBG00005004382) #25 NQO2 (ENSSHBG00005004374) #26 DUSP22 (ENSSHBG00005004366) IRF4 (ENSSHBG00005004353) EXOC2 (ENSSHBG00005004310) FOXQ1 (ENSSHBG00005004279) FOXF2 (ENSSHBG00005004277) FOXC1 (ENSSHBG00005004271) GMDS (ENSSHBG00005004265) MYLK4 (ENSSHBG00005004245) WRNIP1 (ENSSHBG00005004231) #36 SERPINB1 (ENSSHBG00005004225) #35 SERPINB8 (ENSSHBG00005004219) ENSSHBG00005004209 Kakapo MODERN SPECIES NAPG (ENSSHBG00005006399) APCDD1 (ENSSHBG00005006347) VAPA (ENSSHBG00005006288) RAB31 (ENSSHBG00005006263) PPP4R1 (ENSSHBG00005006216) ENSSHBG00005006189 RALBP1 (ENSSHBG00005006172) TWSG1 (ENSSHBG00005006144) ANKRD12 (ENSSHBG00005006105) NDUFV2 (ENSSHBG00005006080) MTCL1 (ENSSHBG00005005903) RAB12 (ENSSHBG00005000650) ENSSHBG00005000649 SLC22A23 (ENSSHBG00005004433) #20 PSMG4 (ENSSHBG00005004425) #21 ENSSHBG00005004422 #22 ENSSHBG00005004411 #22 BPHL (ENSSHBG00005004398) #24 RIPK1 (ENSSHBG00005004382) #25 NQO2 (ENSSHBG00005004374) #26 DUSP22 (ENSSHBG00005004366) IRF4 (ENSSHBG00005004353) EXOC2 (ENSSHBG00005004310) FOXQ1 (ENSSHBG00005004279) FOXF2 (ENSSHBG00005004277) FOXC1 (ENSSHBG00005004271) GMDS (ENSSHBG00005004265) MYLK4 (ENSSHBG00005004245) WRNIP1 (ENSSHBG00005004231) #36 SERPINB1 (ENSSHBG00005004225) #35 SERPINB8 (ENSSHBG00005004219) Passeriformes ANCESTRAL SPECIES ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Great tit MODERN SPECIES 11 RIOK1 (ENSPMJG00000018337) SSR1 (ENSPMJG00000018338) RREB1 (ENSPMJG00000018339) LY86 (ENSPMJG00000018344) F13A1 (ENSPMJG00000018345) NRN1 (ENSPMJG00000018347) #7 FARS2 (ENSPMJG00000018349) #8 ENSPMJG00000018350 #9 RPP40 (ENSPMJG00000018352) #11 ENSPMJG00000018353 #12 ECI2 (ENSPMJG00000018355) #13 PRPF4B (ENSPMJG00000018359) #17 PXDC1 (ENSPMJG00000018361) #19 SLC22A23 (ENSPMJG00000018363) #20 PSMG4 (ENSPMJG00000018368) #21 ENSPMJG00000018369 #22 BPHL (ENSPMJG00000018371) #24 RIPK1 (ENSPMJG00000018375) #25 ENSPMJG00000018377 DUSP22 (ENSPMJG00000018378) IRF4 (ENSPMJG00000018379) EXOC2 (ENSPMJG00000018383) FOXQ1 (ENSPMJG00000018389) FOXF2 (ENSPMJG00000018391) FOXC1 (ENSPMJG00000018394) GMDS (ENSPMJG00000000076) MYLK4 (ENSPMJG00000000147) WRNIP1 (ENSPMJG00000000158) #36 SERPINB1 (ENSPMJG00000000195) #35 SERPINB8 (ENSPMJG00000000213) ENSPMJG00000000225 Passeriformes_d ANCESTRAL SPECIES ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT01040000244549 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Flycatcher DUPLICATION Flycatcher MODERN SPECIES 11 DSP (ENSFALG00000013249) RIOK1 (ENSFALG00000013244) SSR1 (ENSFALG00000028864) RREB1 (ENSFALG00000013231) LY86 (ENSFALG00000013228) F13A1 (ENSFALG00000013198) NRN1 (ENSFALG00000013174) #7 FARS2 (ENSFALG00000013171) #8 LYRM4 (ENSFALG00000013168) #9 RPP40 (ENSFALG00000013166) #11 ENSFALG00000013160 #12 ECI2 (ENSFALG00000013156) #13 PRPF4B (ENSFALG00000013150) #17 PXDC1 (ENSFALG00000013145) #19 SLC22A23 (ENSFALG00000026713) #20 ENSFALG00000013119 #22 PSMG4 (ENSFALG00000014789) #21 ENSFALG00000013131 #22 BPHL (ENSFALG00000013104) #24 RIPK1 (ENSFALG00000013093) #25 ENSFALG00000028950 #26 ENSFALG00000023587 #26 DUSP22 (ENSFALG00000029026) IRF4 (ENSFALG00000013071) ENSFALG00000025007 EXOC2 (ENSFALG00000013064) ENSFALG00000026073 ENSFALG00000027331 GMDS (ENSFALG00000013059) MYLK4 (ENSFALG00000023986) WRNIP1 (ENSFALG00000013052) #36 Flycatcher MODERN SPECIES 11 SSR1 (ENSFALG00000028864) RREB1 (ENSFALG00000013231) LY86 (ENSFALG00000013228) F13A1 (ENSFALG00000013198) NRN1 (ENSFALG00000013174) #7 FARS2 (ENSFALG00000013171) #8 LYRM4 (ENSFALG00000013168) #9 RPP40 (ENSFALG00000013166) #11 ENSFALG00000013160 #12 ECI2 (ENSFALG00000013156) #13 PRPF4B (ENSFALG00000013150) #17 PXDC1 (ENSFALG00000013145) #19 SLC22A23 (ENSFALG00000026713) #20 ENSFALG00000013119 #22 PSMG4 (ENSFALG00000014789) #21 ENSFALG00000013131 #22 BPHL (ENSFALG00000013104) #24 RIPK1 (ENSFALG00000013093) #25 ENSFALG00000028950 #26 ENSFALG00000023587 #26 DUSP22 (ENSFALG00000029026) IRF4 (ENSFALG00000013071) ENSFALG00000025007 EXOC2 (ENSFALG00000013064) ENSFALG00000026073 ENSFALG00000027331 GMDS (ENSFALG00000013059) MYLK4 (ENSFALG00000023986) WRNIP1 (ENSFALG00000013052) #36 SERPINB1 (ENSFALG00000028871) #35 ENSFALG00000013046 Passeriformes_g ANCESTRAL SPECIES 3 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT01040000244549 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Medium ground finch DUPLICATION Medium ground finch MODERN SPECIES 76 PABPN1L (ENSGFOG00000004646) ENSGFOG00000004668 ENSGFOG00000004675 ACSF3 (ENSGFOG00000004695) ANKRD11 (ENSGFOG00000004732) SPG7 (ENSGFOG00000004756) RPL13 (ENSGFOG00000004794) ENSGFOG00000004867 CHMP1A (ENSGFOG00000004907) CDK10 (ENSGFOG00000004922) ZNF276 (ENSGFOG00000004964) FANCA (ENSGFOG00000005012) SPIRE2 (ENSGFOG00000005126) TCF25 (ENSGFOG00000005151) MC1R (ENSGFOG00000005172) ENSGFOG00000005182 #22 DEF8 (ENSGFOG00000005196) GAS8 (ENSGFOG00000005208) ENSGFOG00000005220 ENSGFOG00000005227 CDH1 (ENSGFOG00000005242) HAS3 (ENSGFOG00000005448) CHTF8 (ENSGFOG00000005461) UTP4 (ENSGFOG00000005478) SNTB2 (ENSGFOG00000005490) VPS4A (ENSGFOG00000008500) COG8 (ENSGFOG00000008651) TMED6 (ENSGFOG00000008658) TERF2 (ENSGFOG00000008665) CYB5B (ENSGFOG00000008672) NFAT5 (ENSGFOG00000008689) Medium ground finch MODERN SPECIES 100 ENSGFOG00000008975 #22 BPHL (ENSGFOG00000008775) #24 RIPK1 (ENSGFOG00000008752) #25 NQO2 (ENSGFOG00000008738) #26 ENSGFOG00000008733 IRF4 (ENSGFOG00000008701) EXOC2 (ENSGFOG00000008679) ENSGFOG00000008669 GMDS (ENSGFOG00000008614) MYLK4 (ENSGFOG00000008576) WRNIP1 (ENSGFOG00000008533) #36 SERPINB1 (ENSGFOG00000008522) #35 ENSGFOG00000008517 ENSGFOG00000008513 ENSGFOG00000008476 ENSGFOG00000008425 Medium ground finch MODERN SPECIES 79 RIOK1 (ENSGFOG00000013445) SSR1 (ENSGFOG00000013437) RREB1 (ENSGFOG00000013428) LY86 (ENSGFOG00000013427) F13A1 (ENSGFOG00000013409) NRN1 (ENSGFOG00000013406) #7 FARS2 (ENSGFOG00000013403) #8 ENSGFOG00000013401 RPP40 (ENSGFOG00000013400) #11 ENSGFOG00000013398 #12 ECI2 (ENSGFOG00000013394) #13 PRPF4B (ENSGFOG00000013384) #17 PXDC1 (ENSGFOG00000013381) #19 SLC22A23 (ENSGFOG00000013374) #20 ENSGFOG00000013373 ENSGFOG00000013371 #22 ENSGFOG00000013368 Passeroidea ANCESTRAL SPECIES 2 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT01040000244549 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Zebra finch MODERN SPECIES 12 RREB1 (ENSTGUG00000002309) LY86 (ENSTGUG00000026091) F13A1 (ENSTGUG00000002276) NRN1 (ENSTGUG00000002274) #7 FARS2 (ENSTGUG00000002269) #8 LYRM4 (ENSTGUG00000021255) #9 PPP1R3G (ENSTGUG00000020062) #10 ENSTGUG00000021338 RPP40 (ENSTGUG00000002258) #11 ENSTGUG00000002246 #12 ECI2 (ENSTGUG00000002230) #13 PRPF4B (ENSTGUG00000002208) #17 PXDC1 (ENSTGUG00000002202) #19 SLC22A23 (ENSTGUG00000002194) #20 PSMG4 (ENSTGUG00000023303) #21 ENSTGUG00000028536 #22 BPHL (ENSTGUG00000002178) #24 RIPK1 (ENSTGUG00000002170) #25 NQO2 (ENSTGUG00000002159) #26 DUSP22 (ENSTGUG00000027185) IRF4 (ENSTGUG00000002144) EXOC2 (ENSTGUG00000002131) ENSTGUG00000022060 FOXQ1 (ENSTGUG00000018779) ENSTGUG00000002129 FOXC1 (ENSTGUG00000002127) GMDS (ENSTGUG00000002124) MYLK4 (ENSTGUG00000019999) WRNIP1 (ENSTGUG00000002117) #36 SERPINB1 (ENSTGUG00000002101) #35 ENSTGUG00000021604 Common canary MODERN SPECIES RIOK1 (ENSSCAG00000001794) SSR1 (ENSSCAG00000001843) RREB1 (ENSSCAG00000001855) LY86 (ENSSCAG00000001879) F13A1 (ENSSCAG00000001885) NRN1 (ENSSCAG00000001893) #7 FARS2 (ENSSCAG00000001940) #8 ENSSCAG00000001955 RPP40 (ENSSCAG00000001959) #11 ENSSCAG00000001965 #12 ECI2 (ENSSCAG00000001987) #13 PRPF4B (ENSSCAG00000001999) #17 PXDC1 (ENSSCAG00000002010) #19 SLC22A23 (ENSSCAG00000002027) #20 PSMG4 (ENSSCAG00000002041) #21 TUBB2B (ENSSCAG00000002047) #22 BPHL (ENSSCAG00000002072) #24 RIPK1 (ENSSCAG00000002077) #25 NQO2 (ENSSCAG00000002088) #26 DUSP22 (ENSSCAG00000002092) IRF4 (ENSSCAG00000002096) ENSSCAG00000002099 EXOC2 (ENSSCAG00000002115) FOXF2 (ENSSCAG00000002132) ENSSCAG00000002139 GMDS (ENSSCAG00000002174) MYLK4 (ENSSCAG00000002209) WRNIP1 (ENSSCAG00000002234) #36 SERPINB1 (ENSSCAG00000002246) #35 ENSSCAG00000002253 ENSSCAG00000002262 Galloanserae ANCESTRAL SPECIES ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209.d #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Anatidae ANCESTRAL SPECIES 3 ENSGT00940000155171.a.a ENSGT00940000155171.a.b ENSGT00390000012731.a.a ENSGT00390000004886 ENSGT00500000044852.a ENSGT00940000154574.c ENSGT00940000154952.a.b ENSGT00940000155533.d ENSGT00940000154766.a.a ENSGT00940000166969.b ENSGT00390000009802.a ENSGT00940000155562 #17 ENSGT00390000009209.d #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000163866.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Duck MODERN SPECIES 10 ANKRD33B (ENSAPLG00000016329) DAP (ENSAPLG00000021887) ENSAPLG00000016359 ENSAPLG00000028170 ENSAPLG00000026688 ENSAPLG00000022935 ENSAPLG00000026164 ENSAPLG00000018807 TRIO (ENSAPLG00000008508) ENSAPLG00000017143 OTULINL (ENSAPLG00000009753) PRPF4B (ENSAPLG00000009869) #17 ENSAPLG00000013227 #19 SLC22A23 (ENSAPLG00000015771) #20 PSMG4 (ENSAPLG00000023970) #21 TUBB2A (ENSAPLG00000027345) #22 BPHL (ENSAPLG00000015545) #24 RIPK1 (ENSAPLG00000015420) #25 NQO2 (ENSAPLG00000015289) #26 DUSP22 (ENSAPLG00000015108) IRF4 (ENSAPLG00000014646) EXOC2 (ENSAPLG00000013910) ENSAPLG00000017427 FOXC1 (ENSAPLG00000017354) ENSAPLG00000026009 GMDS (ENSAPLG00000013864) MYLK4 (ENSAPLG00000013701) WRNIP1 (ENSAPLG00000013539) #36 SERPINB1 (ENSAPLG00000012958) #35 SERPINB8 (ENSAPLG00000012569) ENSAPLG00000001572 Pink-footed goose DUPLICATION Pink-footed goose MODERN SPECIES 55 DNAH5 (ENSABRG00000004814) TRIO (ENSABRG00000005891) OTULINL (ENSABRG00000011720) PRPF4B (ENSABRG00000011735) #17 PXDC1 (ENSABRG00000011748) #19 SLC22A23 (ENSABRG00000011756) #20 PSMG4 (ENSABRG00000011758) #21 ENSABRG00000011762 ENSABRG00000011765 #22 ENSABRG00000011768 #22 BPHL (ENSABRG00000011769) #24 DUSP22 (ENSABRG00000011775) RIPK1 (ENSABRG00000011788) #25 NQO2 (ENSABRG00000011803) #26 IRF4 (ENSABRG00000011809) EXOC2 (ENSABRG00000011820) FOXF2 (ENSABRG00000011864) FOXC1 (ENSABRG00000011867) GMDS (ENSABRG00000011874) MYLK4 (ENSABRG00000011911) WRNIP1 (ENSABRG00000011943) #36 SERPINB1 (ENSABRG00000011958) #35 SERPINB8 (ENSABRG00000011968) ENSABRG00000011978 Pink-footed goose MODERN SPECIES 55 DNAH5 (ENSABRG00000004814) TRIO (ENSABRG00000005891) OTULINL (ENSABRG00000011720) PRPF4B (ENSABRG00000011735) #17 PXDC1 (ENSABRG00000011748) #19 SLC22A23 (ENSABRG00000011756) #20 PSMG4 (ENSABRG00000011758) #21 ENSABRG00000011762 ENSABRG00000011765 #22 ENSABRG00000011768 #22 BPHL (ENSABRG00000011769) #24 DUSP22 (ENSABRG00000011775) RIPK1 (ENSABRG00000011788) #25 NQO2 (ENSABRG00000011803) #26 IRF4 (ENSABRG00000011809) EXOC2 (ENSABRG00000011820) FOXF2 (ENSABRG00000011864) FOXC1 (ENSABRG00000011867) GMDS (ENSABRG00000011874) MYLK4 (ENSABRG00000011911) WRNIP1 (ENSABRG00000011943) #36 SERPINB1 (ENSABRG00000011958) #35 SERPINB8 (ENSABRG00000011968) ENSABRG00000011978 ENSABRG00000011985 Phasianidae ANCESTRAL SPECIES 1 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209.d #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a Japanese quail DUPLICATION Japanese quail MODERN SPECIES 11 RREB1 (ENSCJPG00005016991) LY86 (ENSCJPG00005016981) F13A1 (ENSCJPG00005016970) NRN1 (ENSCJPG00005016967) #7 FARS2 (ENSCJPG00005016936) #8 LYRM4 (ENSCJPG00005016880) #9 PPP1R3G (ENSCJPG00005016879) #10 RPP40 (ENSCJPG00005016878) #11 ENSCJPG00005016876 #12 ECI2 (ENSCJPG00005016830) #13 PRPF4B (ENSCJPG00005016829) #17 ENSCJPG00005016794 #19 SLC22A23 (ENSCJPG00005016793) #20 PSMG4 (ENSCJPG00005016792) #21 ENSCJPG00005016791 #22 ENSCJPG00005016790 #22 BPHL (ENSCJPG00005016789) #24 RIPK1 (ENSCJPG00005016788) #25 SERPINB11 (ENSCJPG00005016777) SERPINB5 (ENSCJPG00005016776) VPS4B (ENSCJPG00005016775) KDSR (ENSCJPG00005016774) BCL2 (ENSCJPG00005016773) ENSCJPG00005016772 PHLPP1 (ENSCJPG00005016771) ZCCHC2 (ENSCJPG00005016739) TNFRSF11A (ENSCJPG00005016738) RELCH (ENSCJPG00005016435) PIGN (ENSCJPG00005015650) RNF152 (ENSCJPG00005015648) CDH20 (ENSCJPG00005015646) Japanese quail MODERN SPECIES 11 SSR1 (ENSCJPG00005016996) RREB1 (ENSCJPG00005016991) LY86 (ENSCJPG00005016981) F13A1 (ENSCJPG00005016970) NRN1 (ENSCJPG00005016967) #7 FARS2 (ENSCJPG00005016936) #8 LYRM4 (ENSCJPG00005016880) #9 PPP1R3G (ENSCJPG00005016879) #10 RPP40 (ENSCJPG00005016878) #11 ENSCJPG00005016876 #12 ECI2 (ENSCJPG00005016830) #13 PRPF4B (ENSCJPG00005016829) #17 ENSCJPG00005016794 #19 SLC22A23 (ENSCJPG00005016793) #20 PSMG4 (ENSCJPG00005016792) #21 ENSCJPG00005016791 #22 ENSCJPG00005016790 #22 BPHL (ENSCJPG00005016789) #24 RIPK1 (ENSCJPG00005016788) #25 SERPINB11 (ENSCJPG00005016777) SERPINB5 (ENSCJPG00005016776) VPS4B (ENSCJPG00005016775) KDSR (ENSCJPG00005016774) BCL2 (ENSCJPG00005016773) ENSCJPG00005016772 PHLPP1 (ENSCJPG00005016771) ZCCHC2 (ENSCJPG00005016739) TNFRSF11A (ENSCJPG00005016738) RELCH (ENSCJPG00005016435) PIGN (ENSCJPG00005015650) RNF152 (ENSCJPG00005015648) Phasianidae_b ANCESTRAL SPECIES 1 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209.d #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C ENSGT00940000165915.a ENSGT00940000165915.b Chicken DUPLICATION Chicken MODERN SPECIES 11 LY86 (ENSGALG00010010896) F13A1 (ENSGALG00010010923) NRN1 (ENSGALG00010010942) #7 FARS2 (ENSGALG00010010977) #8 LYRM4 (ENSGALG00010011015) #9 PPP1R3G (ENSGALG00010011021) #10 ENSGALG00010011235 ENSGALG00010011247 #12 ECI2 (ENSGALG00010011306) #13 PRPF4B (ENSGALG00010011318) #17 PXDC1 (ENSGALG00010011343) #19 SLC22A23 (ENSGALG00010011348) #20 PSMG4 (ENSGALG00010011365) #21 TUBB2B (ENSGALG00010011378) #22 BPHL (ENSGALG00010011400) #24 ENSGALG00010012742 #22 RIPK1 (ENSGALG00010011418) #25 NQO2 (ENSGALG00010011426) #26 DUSP22 (ENSGALG00010011449) IRF4 (ENSGALG00010011461) EXOC2 (ENSGALG00010011509) FOXQ1 (ENSGALG00010012139) ENSGALG00010011521 GMDS (ENSGALG00010011551) MYLK4 (ENSGALG00010011578) WRNIP1 (ENSGALG00010011593) #36 SERPINB1 (ENSGALG00010011626) #35 SERPINB6 (ENSGALG00010011651) SERPINB10B (ENSGALG00010011664) ENSGALG00010011674 OVAL (ENSGALG00010011679) Chicken MODERN SPECIES 11 SSR1 (ENSGALG00010010270) RREB1 (ENSGALG00010010349) LY86 (ENSGALG00010010896) F13A1 (ENSGALG00010010923) NRN1 (ENSGALG00010010942) #7 FARS2 (ENSGALG00010010977) #8 LYRM4 (ENSGALG00010011015) #9 PPP1R3G (ENSGALG00010011021) #10 ENSGALG00010011235 ENSGALG00010011247 #12 ECI2 (ENSGALG00010011306) #13 PRPF4B (ENSGALG00010011318) #17 PXDC1 (ENSGALG00010011343) #19 SLC22A23 (ENSGALG00010011348) #20 PSMG4 (ENSGALG00010011365) #21 TUBB2B (ENSGALG00010011378) #22 BPHL (ENSGALG00010011400) #24 ENSGALG00010012742 #22 RIPK1 (ENSGALG00010011418) #25 NQO2 (ENSGALG00010011426) #26 DUSP22 (ENSGALG00010011449) IRF4 (ENSGALG00010011461) EXOC2 (ENSGALG00010011509) FOXQ1 (ENSGALG00010012139) ENSGALG00010011521 GMDS (ENSGALG00010011551) MYLK4 (ENSGALG00010011578) WRNIP1 (ENSGALG00010011593) #36 SERPINB1 (ENSGALG00010011626) #35 SERPINB6 (ENSGALG00010011651) SERPINB10B (ENSGALG00010011664) Turkey DUPLICATION Turkey MODERN SPECIES 22 RIOK1 (ENSMGAG00000003816) SSR1 (ENSMGAG00000003888) RREB1 (ENSMGAG00000003910) LY86 (ENSMGAG00000003927) F13A1 (ENSMGAG00000003939) NRN1 (ENSMGAG00000022812) #7 FARS2 (ENSMGAG00000003984) #8 LYRM4 (ENSMGAG00000004002) #9 RPP40 (ENSMGAG00000004009) #11 ENSMGAG00000004026 #12 ECI2 (ENSMGAG00000004079) #13 PRPF4B (ENSMGAG00000004104) #17 PXDC1 (ENSMGAG00000017797) #19 SLC22A23 (ENSMGAG00000004155) #20 ENSMGAG00000022935 ENSMGAG00000004168 #22 BPHL (ENSMGAG00000004203) #24 RIPK1 (ENSMGAG00000004233) #25 DUSP22 (ENSMGAG00000004393) NQO2 (ENSMGAG00000004502) #26 IRF4 (ENSMGAG00000004406) ENSMGAG00000004422 GMDS (ENSMGAG00000004494) MYLK4 (ENSMGAG00000004532) WRNIP1 (ENSMGAG00000004262) #36 SERPINB1 (ENSMGAG00000004352) #35 ENSMGAG00000004267 ENSMGAG00000018556 ENSMGAG00000004373 SERPINB10 (ENSMGAG00000004382) SERPINB14 (ENSMGAG00000016695) Turkey MODERN SPECIES 474 ENSMGAG00000020741 #22 Lepidosauria ANCESTRAL SPECIES 2 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000167417 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C Episquamata ANCESTRAL SPECIES 1 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C.f Toxicofera ANCESTRAL SPECIES 8 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Lizard DUPLICATION Lizard MODERN SPECIES 1666 NDOR1 (ENSACAG00000012920) TMEM203 (ENSACAG00000038616) TPRN (ENSACAG00000012919) ENSACAG00000012869 #22 ENSACAG00000012845 Lizard MODERN SPECIES 861 KDSR (ENSACAG00000017590) VPS4B (ENSACAG00000017602) SERPINB5 (ENSACAG00000017619) SERPINB11 (ENSACAG00000017621) ENSACAG00000043944 ENSACAG00000017641 ENSACAG00000017642 PRPF4B (ENSACAG00000017650) #17 PXDC1 (ENSACAG00000017660) #19 SLC22A23 (ENSACAG00000042433) #20 ENSACAG00000035794 ENSACAG00000038434 #22 ENSACAG00000039065 #22 BPHL (ENSACAG00000017692) #24 RIPK1 (ENSACAG00000017693) #25 NQO2 (ENSACAG00000017701) #26 DUSP22 (ENSACAG00000017705) IRF4 (ENSACAG00000017711) EXOC2 (ENSACAG00000017715) FOXQ1 (ENSACAG00000038044) ENSACAG00000017732 FOXC1 (ENSACAG00000044418) Lizard MODERN SPECIES 861 KDSR (ENSACAG00000017590) VPS4B (ENSACAG00000017602) SERPINB5 (ENSACAG00000017619) SERPINB11 (ENSACAG00000017621) ENSACAG00000043944 ENSACAG00000017641 ENSACAG00000017642 PRPF4B (ENSACAG00000017650) #17 PXDC1 (ENSACAG00000017660) #19 SLC22A23 (ENSACAG00000042433) #20 ENSACAG00000035794 ENSACAG00000038434 #22 ENSACAG00000039065 #22 BPHL (ENSACAG00000017692) #24 RIPK1 (ENSACAG00000017693) #25 NQO2 (ENSACAG00000017701) #26 DUSP22 (ENSACAG00000017705) IRF4 (ENSACAG00000017711) EXOC2 (ENSACAG00000017715) FOXQ1 (ENSACAG00000038044) ENSACAG00000017732 FOXC1 (ENSACAG00000044418) Elapidae ANCESTRAL SPECIES 8 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153.e ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573.e #35 ENSGT00940000154573.f #35 ENSGT00940000154835.C.f.c.b.b Elapidae_a ANCESTRAL SPECIES 14 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153.f ENSGT00940000157153.e ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573.e #35 Blue-lipped sea krait MODERN SPECIES 3655 TUBB2A (ENSLLTG00000001528) #22 Acanthophiinae ANCESTRAL SPECIES 16 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153.f ENSGT00940000157153.e ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573.e #35 Eastern brown snake MODERN SPECIES 75 RREB1 (ENSPTXG00000014803) LY86 (ENSPTXG00000014806) F13A1 (ENSPTXG00000014807) NRN1 (ENSPTXG00000014810) #7 FARS2 (ENSPTXG00000014815) #8 ENSPTXG00000014816 LYRM4 (ENSPTXG00000014817) #9 PPP1R3G (ENSPTXG00000014818) #10 RPP40 (ENSPTXG00000014825) #11 ENSPTXG00000014829 #12 ECI2 (ENSPTXG00000014830) #13 PRPF4B (ENSPTXG00000014832) #17 PXDC1 (ENSPTXG00000014833) #19 SLC22A23 (ENSPTXG00000012278) #20 PSMG4 (ENSPTXG00000012279) #21 ENSPTXG00000012281 #22 ENSPTXG00000012285 BPHL (ENSPTXG00000012286) #24 RIPK1 (ENSPTXG00000012287) #25 NQO2 (ENSPTXG00000012288) #26 ENSPTXG00000012290 ENSPTXG00000012291 IRF4 (ENSPTXG00000012295) EXOC2 (ENSPTXG00000012355) FOXF2 (ENSPTXG00000012358) FOXC1 (ENSPTXG00000012359) GMDS (ENSPTXG00000012360) MYLK4 (ENSPTXG00000012362) WRNIP1 (ENSPTXG00000012366) #36 ENSPTXG00000012367 #35 ENSPTXG00000012368 #35 Mainland tiger snake DUPLICATION Mainland tiger snake MODERN SPECIES 84 SSR1 (ENSNSUG00000005581) RREB1 (ENSNSUG00000005568) LY86 (ENSNSUG00000005567) F13A1 (ENSNSUG00000005558) NRN1 (ENSNSUG00000005557) #7 FARS2 (ENSNSUG00000005555) #8 LYRM4 (ENSNSUG00000005554) #9 PPP1R3G (ENSNSUG00000005553) #10 RPP40 (ENSNSUG00000005551) #11 ENSNSUG00000005548 #12 ECI2 (ENSNSUG00000005541) #13 PRPF4B (ENSNSUG00000005540) #17 PXDC1 (ENSNSUG00000005538) #19 SLC22A23 (ENSNSUG00000005534) #20 PSMG4 (ENSNSUG00000005533) #21 ENSNSUG00000005532 #22 ENSNSUG00000005510 #22 TUBB2A (ENSNSUG00000005509) #22 BPHL (ENSNSUG00000005503) #24 RIPK1 (ENSNSUG00000005501) #25 NQO2 (ENSNSUG00000005474) #26 ENSNSUG00000005471 ENSNSUG00000005470 IRF4 (ENSNSUG00000005456) EXOC2 (ENSNSUG00000005455) FOXQ1 (ENSNSUG00000005453) FOXC1 (ENSNSUG00000005451) GMDS (ENSNSUG00000005444) MYLK4 (ENSNSUG00000005436) WRNIP1 (ENSNSUG00000005435) #36 ENSNSUG00000005434 #35 Mainland tiger snake MODERN SPECIES 84 LY86 (ENSNSUG00000005567) F13A1 (ENSNSUG00000005558) NRN1 (ENSNSUG00000005557) #7 FARS2 (ENSNSUG00000005555) #8 LYRM4 (ENSNSUG00000005554) #9 PPP1R3G (ENSNSUG00000005553) #10 RPP40 (ENSNSUG00000005551) #11 ENSNSUG00000005548 #12 ECI2 (ENSNSUG00000005541) #13 PRPF4B (ENSNSUG00000005540) #17 PXDC1 (ENSNSUG00000005538) #19 SLC22A23 (ENSNSUG00000005534) #20 PSMG4 (ENSNSUG00000005533) #21 ENSNSUG00000005532 #22 ENSNSUG00000005510 #22 TUBB2A (ENSNSUG00000005509) #22 BPHL (ENSNSUG00000005503) #24 RIPK1 (ENSNSUG00000005501) #25 NQO2 (ENSNSUG00000005474) #26 ENSNSUG00000005471 ENSNSUG00000005470 IRF4 (ENSNSUG00000005456) EXOC2 (ENSNSUG00000005455) FOXQ1 (ENSNSUG00000005453) FOXC1 (ENSNSUG00000005451) GMDS (ENSNSUG00000005444) MYLK4 (ENSNSUG00000005436) WRNIP1 (ENSNSUG00000005435) #36 ENSNSUG00000005434 #35 ENSNSUG00000005433 #35 Mainland tiger snake MODERN SPECIES 84 RREB1 (ENSNSUG00000005568) LY86 (ENSNSUG00000005567) F13A1 (ENSNSUG00000005558) NRN1 (ENSNSUG00000005557) #7 FARS2 (ENSNSUG00000005555) #8 LYRM4 (ENSNSUG00000005554) #9 PPP1R3G (ENSNSUG00000005553) #10 RPP40 (ENSNSUG00000005551) #11 ENSNSUG00000005548 #12 ECI2 (ENSNSUG00000005541) #13 PRPF4B (ENSNSUG00000005540) #17 PXDC1 (ENSNSUG00000005538) #19 SLC22A23 (ENSNSUG00000005534) #20 PSMG4 (ENSNSUG00000005533) #21 ENSNSUG00000005532 #22 ENSNSUG00000005510 #22 TUBB2A (ENSNSUG00000005509) #22 BPHL (ENSNSUG00000005503) #24 RIPK1 (ENSNSUG00000005501) #25 NQO2 (ENSNSUG00000005474) #26 ENSNSUG00000005471 ENSNSUG00000005470 IRF4 (ENSNSUG00000005456) EXOC2 (ENSNSUG00000005455) FOXQ1 (ENSNSUG00000005453) FOXC1 (ENSNSUG00000005451) GMDS (ENSNSUG00000005444) MYLK4 (ENSNSUG00000005436) WRNIP1 (ENSNSUG00000005435) #36 ENSNSUG00000005434 #35 ENSNSUG00000005433 #35 Indian cobra DUPLICATION Indian cobra MODERN SPECIES 2 RREB1 (ENSNNAG00000008698) LY86 (ENSNNAG00000008627) F13A1 (ENSNNAG00000008507) NRN1 (ENSNNAG00000008461) #7 FARS2 (ENSNNAG00000008399) #8 LYRM4 (ENSNNAG00000008378) #9 PPP1R3G (ENSNNAG00000008372) #10 RPP40 (ENSNNAG00000008348) #11 ENSNNAG00000008323 #12 ECI2 (ENSNNAG00000008208) #13 PRPF4B (ENSNNAG00000007587) #17 PXDC1 (ENSNNAG00000016457) #19 SLC22A23 (ENSNNAG00000016441) #20 PSMG4 (ENSNNAG00000016435) #21 ENSNNAG00000016425 #22 ENSNNAG00000016415 #22 BPHL (ENSNNAG00000016410) #24 ENSNNAG00000016405 NQO2 (ENSNNAG00000016400) #26 DUSP22 (ENSNNAG00000016392) IRF4 (ENSNNAG00000016381) ENSNNAG00000016376 FOXF2 (ENSNNAG00000016367) FOXC1 (ENSNNAG00000016361) GMDS (ENSNNAG00000016354) MYLK4 (ENSNNAG00000016322) WRNIP1 (ENSNNAG00000016296) #36 SERPINB1 (ENSNNAG00000016284) #35 ENSNNAG00000016209 ENSNNAG00000016179 ENSNNAG00000016150 Indian cobra MODERN SPECIES 2 SSR1 (ENSNNAG00000009475) RREB1 (ENSNNAG00000008698) LY86 (ENSNNAG00000008627) F13A1 (ENSNNAG00000008507) NRN1 (ENSNNAG00000008461) #7 FARS2 (ENSNNAG00000008399) #8 LYRM4 (ENSNNAG00000008378) #9 PPP1R3G (ENSNNAG00000008372) #10 RPP40 (ENSNNAG00000008348) #11 ENSNNAG00000008323 #12 ECI2 (ENSNNAG00000008208) #13 PRPF4B (ENSNNAG00000007587) #17 PXDC1 (ENSNNAG00000016457) #19 SLC22A23 (ENSNNAG00000016441) #20 PSMG4 (ENSNNAG00000016435) #21 ENSNNAG00000016425 #22 ENSNNAG00000016415 #22 BPHL (ENSNNAG00000016410) #24 ENSNNAG00000016405 NQO2 (ENSNNAG00000016400) #26 DUSP22 (ENSNNAG00000016392) IRF4 (ENSNNAG00000016381) ENSNNAG00000016376 FOXF2 (ENSNNAG00000016367) FOXC1 (ENSNNAG00000016361) GMDS (ENSNNAG00000016354) MYLK4 (ENSNNAG00000016322) WRNIP1 (ENSNNAG00000016296) #36 SERPINB1 (ENSNNAG00000016284) #35 ENSNNAG00000016209 ENSNNAG00000016179 Laterata ANCESTRAL SPECIES 5 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00390000011804 #21 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000162527 ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 ENSGT00940000154835.C.f ENSGT00940000165915 Argentine black and white tegu DUPLICATION Argentine black and white tegu MODERN SPECIES 4 LY86 (ENSSMRG00000006825) F13A1 (ENSSMRG00000006851) NRN1 (ENSSMRG00000008058) #7 FARS2 (ENSSMRG00000008101) #8 LYRM4 (ENSSMRG00000008133) #9 PPP1R3G (ENSSMRG00000008139) #10 RPP40 (ENSSMRG00000008143) #11 ENSSMRG00000008170 #12 ENSSMRG00000008195 #13 ECI2 (ENSSMRG00000008211) #13 ENSSMRG00000008212 #16 PRPF4B (ENSSMRG00000008213) #17 PXDC1 (ENSSMRG00000008220) #19 SLC22A23 (ENSSMRG00000008240) #20 PSMG4 (ENSSMRG00000008242) #21 ENSSMRG00000008243 #22 TUBB2B (ENSSMRG00000008244) #22 BPHL (ENSSMRG00000008245) #24 RIPK1 (ENSSMRG00000008251) #25 DUSP22 (ENSSMRG00000008261) NQO2 (ENSSMRG00000008267) #26 IRF4 (ENSSMRG00000008285) EXOC2 (ENSSMRG00000008321) ENSSMRG00000008323 FOXQ1 (ENSSMRG00000008344) FOXF2 (ENSSMRG00000008387) FOXC1 (ENSSMRG00000008390) GMDS (ENSSMRG00000008413) MYLK4 (ENSSMRG00000008475) WRNIP1 (ENSSMRG00000008479) #36 ENSSMRG00000008497 Argentine black and white tegu MODERN SPECIES 4 F13A1 (ENSSMRG00000006851) NRN1 (ENSSMRG00000008058) #7 FARS2 (ENSSMRG00000008101) #8 LYRM4 (ENSSMRG00000008133) #9 PPP1R3G (ENSSMRG00000008139) #10 RPP40 (ENSSMRG00000008143) #11 ENSSMRG00000008170 #12 ENSSMRG00000008195 #13 ECI2 (ENSSMRG00000008211) #13 ENSSMRG00000008212 #16 PRPF4B (ENSSMRG00000008213) #17 PXDC1 (ENSSMRG00000008220) #19 SLC22A23 (ENSSMRG00000008240) #20 PSMG4 (ENSSMRG00000008242) #21 ENSSMRG00000008243 #22 TUBB2B (ENSSMRG00000008244) #22 BPHL (ENSSMRG00000008245) #24 RIPK1 (ENSSMRG00000008251) #25 DUSP22 (ENSSMRG00000008261) NQO2 (ENSSMRG00000008267) #26 IRF4 (ENSSMRG00000008285) EXOC2 (ENSSMRG00000008321) ENSSMRG00000008323 FOXQ1 (ENSSMRG00000008344) FOXF2 (ENSSMRG00000008387) FOXC1 (ENSSMRG00000008390) GMDS (ENSSMRG00000008413) MYLK4 (ENSSMRG00000008475) WRNIP1 (ENSSMRG00000008479) #36 ENSSMRG00000008497 ENSSMRG00000008565 Common wall lizard DUPLICATION Common wall lizard MODERN SPECIES 15 ENSPMRG00000005274 LYRM4 (ENSPMRG00000005276) #9 PPP1R3G (ENSPMRG00000005280) #10 RPP40 (ENSPMRG00000005289) #11 ENSPMRG00000005303 #12 ECI2 (ENSPMRG00000005317) #13 ENSPMRG00000005331 #15 ENSPMRG00000005337 #16 PRPF4B (ENSPMRG00000005348) #17 PXDC1 (ENSPMRG00000005377) #19 SLC22A23 (ENSPMRG00000005395) #20 PSMG4 (ENSPMRG00000005411) #21 ENSPMRG00000005418 #22 ENSPMRG00000005422 #22 ENSPMRG00000005427 #22 ENSPMRG00000005443 #22 BPHL (ENSPMRG00000005453) #24 RIPK1 (ENSPMRG00000005461) #25 DUSP22 (ENSPMRG00000005470) ENSPMRG00000005486 IRF4 (ENSPMRG00000005490) EXOC2 (ENSPMRG00000005505) FOXQ1 (ENSPMRG00000005547) FOXF2 (ENSPMRG00000005550) FOXC1 (ENSPMRG00000005555) GMDS (ENSPMRG00000005558) ENSPMRG00000005567 MYLK4 (ENSPMRG00000005583) WRNIP1 (ENSPMRG00000005616) #36 SERPINB1 (ENSPMRG00000005641) #35 SERPINB8 (ENSPMRG00000005773) Common wall lizard MODERN SPECIES 15 ENSPMRG00000005272 ENSPMRG00000005274 LYRM4 (ENSPMRG00000005276) #9 PPP1R3G (ENSPMRG00000005280) #10 RPP40 (ENSPMRG00000005289) #11 ENSPMRG00000005303 #12 ECI2 (ENSPMRG00000005317) #13 ENSPMRG00000005331 #15 ENSPMRG00000005337 #16 PRPF4B (ENSPMRG00000005348) #17 PXDC1 (ENSPMRG00000005377) #19 SLC22A23 (ENSPMRG00000005395) #20 PSMG4 (ENSPMRG00000005411) #21 ENSPMRG00000005418 #22 ENSPMRG00000005422 #22 ENSPMRG00000005427 #22 ENSPMRG00000005443 #22 BPHL (ENSPMRG00000005453) #24 RIPK1 (ENSPMRG00000005461) #25 DUSP22 (ENSPMRG00000005470) ENSPMRG00000005486 IRF4 (ENSPMRG00000005490) EXOC2 (ENSPMRG00000005505) FOXQ1 (ENSPMRG00000005547) FOXF2 (ENSPMRG00000005550) FOXC1 (ENSPMRG00000005555) GMDS (ENSPMRG00000005558) ENSPMRG00000005567 MYLK4 (ENSPMRG00000005583) WRNIP1 (ENSPMRG00000005616) #36 SERPINB1 (ENSPMRG00000005641) #35 Common wall lizard MODERN SPECIES 15 NRN1 (ENSPMRG00000005263) #7 FARS2 (ENSPMRG00000005269) #8 ENSPMRG00000005272 ENSPMRG00000005274 LYRM4 (ENSPMRG00000005276) #9 PPP1R3G (ENSPMRG00000005280) #10 RPP40 (ENSPMRG00000005289) #11 ENSPMRG00000005303 #12 ECI2 (ENSPMRG00000005317) #13 ENSPMRG00000005331 #15 ENSPMRG00000005337 #16 PRPF4B (ENSPMRG00000005348) #17 PXDC1 (ENSPMRG00000005377) #19 SLC22A23 (ENSPMRG00000005395) #20 PSMG4 (ENSPMRG00000005411) #21 ENSPMRG00000005418 #22 ENSPMRG00000005422 #22 ENSPMRG00000005427 #22 ENSPMRG00000005443 #22 BPHL (ENSPMRG00000005453) #24 RIPK1 (ENSPMRG00000005461) #25 DUSP22 (ENSPMRG00000005470) ENSPMRG00000005486 IRF4 (ENSPMRG00000005490) EXOC2 (ENSPMRG00000005505) FOXQ1 (ENSPMRG00000005547) FOXF2 (ENSPMRG00000005550) FOXC1 (ENSPMRG00000005555) GMDS (ENSPMRG00000005558) ENSPMRG00000005567 MYLK4 (ENSPMRG00000005583) Common wall lizard MODERN SPECIES 15 FARS2 (ENSPMRG00000005269) #8 ENSPMRG00000005272 ENSPMRG00000005274 LYRM4 (ENSPMRG00000005276) #9 PPP1R3G (ENSPMRG00000005280) #10 RPP40 (ENSPMRG00000005289) #11 ENSPMRG00000005303 #12 ECI2 (ENSPMRG00000005317) #13 ENSPMRG00000005331 #15 ENSPMRG00000005337 #16 PRPF4B (ENSPMRG00000005348) #17 PXDC1 (ENSPMRG00000005377) #19 SLC22A23 (ENSPMRG00000005395) #20 PSMG4 (ENSPMRG00000005411) #21 ENSPMRG00000005418 #22 ENSPMRG00000005422 #22 ENSPMRG00000005427 #22 ENSPMRG00000005443 #22 BPHL (ENSPMRG00000005453) #24 RIPK1 (ENSPMRG00000005461) #25 DUSP22 (ENSPMRG00000005470) ENSPMRG00000005486 IRF4 (ENSPMRG00000005490) EXOC2 (ENSPMRG00000005505) FOXQ1 (ENSPMRG00000005547) FOXF2 (ENSPMRG00000005550) FOXC1 (ENSPMRG00000005555) GMDS (ENSPMRG00000005558) ENSPMRG00000005567 MYLK4 (ENSPMRG00000005583) WRNIP1 (ENSPMRG00000005616) #36 tuatara DUPLICATION tuatara MODERN SPECIES 1207 ENSSPUG00000007673 TONSL (ENSSPUG00000007765) VPS28 (ENSSPUG00000007986) ENSSPUG00000008009 #22 ENSSPUG00000008038 tuatara MODERN SPECIES 1313 ENSSPUG00000017487 #11 ENSSPUG00000017443 #12 ECI2 (ENSSPUG00000017412) #13 PRPF4B (ENSSPUG00000017391) #17 ENSSPUG00000017379 PXDC1 (ENSSPUG00000017370) #19 SLC22A23 (ENSSPUG00000017354) #20 PSMG4 (ENSSPUG00000017345) #21 ENSSPUG00000017341 ENSSPUG00000017336 #22 BPHL (ENSSPUG00000017311) #24 RIPK1 (ENSSPUG00000017287) #25 DUSP22 (ENSSPUG00000017277) IRF4 (ENSSPUG00000017270) EXOC2 (ENSSPUG00000017253) ENSSPUG00000017190 ENSSPUG00000017087 MYLK4 (ENSSPUG00000017045) WRNIP1 (ENSSPUG00000017030) #36 ENSSPUG00000017023 #35 ENSSPUG00000017016 ENSSPUG00000017008 ENSSPUG00000015731 SERPINB10 (ENSSPUG00000015442) ENSSPUG00000015437 Anura ANCESTRAL SPECIES 1 ENSGT00530000063853.a.a.b #7 ENSGT00940000158071 #8 ENSGT01000000214902 ENSGT00940000161906 ENSGT01030000234639.A.a.bb.a.b ENSGT01030000234639.A.a.bb.a.a ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #13 ENSGT00940000155562 #17 ENSGT00910000144592 ENSGT00390000009209 #19 ENSGT00940000157354 #20 ENSGT00940000167364 ENSGT00390000004877 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #26 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.b ENSGT00940000163866.a.b ENSGT00940000162303.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154520 ENSGT00940000161560 ENSGT00940000154573 #35 Frog MODERN SPECIES 6 foxf2 (ENSXETG00000041951) FOXQ1 (ENSXETG00000040929) ENSXETG00000045049 ENSXETG00000046984 exoc2 (ENSXETG00000011411) irf4 (ENSXETG00000011413) dusp22 (ENSXETG00000011414) ripk1 (ENSXETG00000011415) #25 prpf4b (ENSXETG00000011416) #17 XB5799681 [provisional:znf26] (ENSXETG00000025594) pxdc1 (ENSXETG00000018024) #19 slc22a23 (ENSXETG00000038931) #20 psmg4 (ENSXETG00000036272) XB5835883 [provisional] (ENSXETG00000018031) ENSXETG00000049374 tubb2b (ENSXETG00000018032) #22 bphl (ENSXETG00000018034) #24 serpinb4 (ENSXETG00000018037) serpinb11 (ENSXETG00000025592) ENSXETG00000032831 eci2 (ENSXETG00000018066) #13 ENSXETG00000036842 cdyl (ENSXETG00000030044) #12 ENSXETG00000045311 rpp40 (ENSXETG00000017617) #11 ENSXETG00000047051 ENSXETG00000046693 ENSXETG00000038879 ENSXETG00000040470 ENSXETG00000033600 lyrm4 (ENSXETG00000038488) Leishan spiny toad DUPLICATION Leishan spiny toad MODERN SPECIES 1442 ENSLLEG00000027111 #22 Leishan spiny toad MODERN SPECIES 8 ENSLLEG00000006664 RPP40 (ENSLLEG00000006778) #11 ENSLLEG00000006879 #12 ENSLLEG00000007014 ENSLLEG00000007045 ECI2 (ENSLLEG00000007079) #13 ENSLLEG00000007199 ENSLLEG00000007225 #13 PRPF4B (ENSLLEG00000007279) #17 ENSLLEG00000007348 ENSLLEG00000007394 PXDC1 (ENSLLEG00000007414) #19 SLC22A23 (ENSLLEG00000007451) #20 ENSLLEG00000007528 ENSLLEG00000007539 TUBB2A (ENSLLEG00000007597) #22 ENSLLEG00000007696 #24 RIPK1 (ENSLLEG00000007756) #25 NQO2 (ENSLLEG00000007807) #26 DUSP22 (ENSLLEG00000007865) IRF4 (ENSLLEG00000007909) EXOC2 (ENSLLEG00000007960) ENSLLEG00000008305 ENSLLEG00000008326 ENSLLEG00000008351 FOXQ1 (ENSLLEG00000008367) ENSLLEG00000008427 FOXC1 (ENSLLEG00000008452) ENSLLEG00000008516 ENSLLEG00000008883 ENSLLEG00000008896 Coelacanth DUPLICATION Coelacanth MODERN SPECIES 1260 SLC22A23 (ENSLACG00000011793) #20 ENSLACG00000011520 TUBB2A (ENSLACG00000011176) #22 tubb2 (ENSLACG00000010984) #22 BPHL (ENSLACG00000010588) #24 RIPK1 (ENSLACG00000009905) #25 ENSLACG00000022503 MAK (ENSLACG00000006403) PAK1IP1 (ENSLACG00000005202) ENSLACG00000002770 ENSLACG00000000802 Coelacanth MODERN SPECIES 1260 SLC22A23 (ENSLACG00000011793) #20 ENSLACG00000011520 TUBB2A (ENSLACG00000011176) #22 tubb2 (ENSLACG00000010984) #22 BPHL (ENSLACG00000010588) #24 RIPK1 (ENSLACG00000009905) #25 ENSLACG00000022503 MAK (ENSLACG00000006403) PAK1IP1 (ENSLACG00000005202) ENSLACG00000002770 ENSLACG00000000802 Actinopterygii ANCESTRAL SPECIES 217 ENSGT00940000157354 #20 ENSGT00940000167364 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00940000156211.a.a ENSGT00940000162303.a.b ENSGT00940000156211.a.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 ENSGT00940000154573 #35 Neopterygii ANCESTRAL SPECIES 100 ENSGT00940000154772 ENSGT00940000156581 ENSGT00390000006777.b ENSGT00530000063859.a ENSGT01050000244838.C.a ENSGT00390000009122 ENSGT00940000155842 ENSGT00990000209355 ENSGT00940000154872.C ENSGT00940000157394 ENSGT00940000158092 ENSGT00940000156328.b ENSGT00940000154843.F ENSGT00940000157354 #20 ENSGT00940000167364 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00940000156211.a.a ENSGT00940000162303.a.b ENSGT00940000156211.a.b ENSGT00440000033640 ENSGT00940000156211.b ENSGT00390000008538 #36 Spotted gar MODERN SPECIES 675 ENSLOCG00000013148 gcm2 (ENSLOCG00000013145) SYCP2L (ENSLOCG00000013137) elovl2 (ENSLOCG00000013133) tbc1d7 (ENSLOCG00000013127) PHACTR1 (ENSLOCG00000013116) ENSLOCG00000013110 sirt5 (ENSLOCG00000013106) adcy1b (ENSLOCG00000013092) igfbp1a (ENSLOCG00000013086) igfbp3 (ENSLOCG00000013080) TNS3 (ENSLOCG00000013065) DSP (ENSLOCG00000013051) slc22a23 (ENSLOCG00000013043) #20 ENSLOCG00000013039 tubb2 (ENSLOCG00000013034) #22 BPHL (ENSLOCG00000013027) #24 ripk1l (ENSLOCG00000013018) #25 dusp22b (ENSLOCG00000013015) irf4a (ENSLOCG00000013008) exoc2 (ENSLOCG00000012994) foxq1a (ENSLOCG00000012990) ENSLOCG00000012987 foxc1a (ENSLOCG00000018165) gmds (ENSLOCG00000012983) MYLK4 (ENSLOCG00000012976) wrnip1 (ENSLOCG00000012970) #36 serpinb1 (ENSLOCG00000012967) #35 serpinb1l4 (ENSLOCG00000012960) FYCO1 (ENSLOCG00000012949) XCR1 (ENSLOCG00000018164) Osteoglossocephalai ANCESTRAL SPECIES 166 ENSGT00940000155842.s ENSGT00940000156080.l ENSGT00940000154872.B ENSGT00940000157394.a ENSGT00940000158092.o ENSGT00940000156328.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F ENSGT00940000157354.i #20 ENSGT00940000167364 ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000157153 ENSGT00940000159059 ENSGT00390000010872 ENSGT00940000162937.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.a ENSGT00940000162937.a.b ENSGT00940000163866.a.a ENSGT00940000162303.a.b ENSGT00940000156211.a.b ENSGT00390000008538 #36 ENSGT00940000158279 ENSGT00940000155265.b.a Clupeocephala ANCESTRAL SPECIES 271 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 Euteleosteomorpha ANCESTRAL SPECIES 10 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00970000194032 ENSGT00990000204641.a ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b Protacanthopterygii ANCESTRAL SPECIES 14 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354.i.b ENSGT00940000160354.i.a ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00970000194032 ENSGT01000000217386 ENSGT00990000204641.a ENSGT00950000182917.b.a.a Northern pike MODERN SPECIES 2 ENSELUG00000027282 foxf2a (ENSELUG00000019684) irf4a (ENSELUG00000019609) dusp22b (ENSELUG00000019302) ripk1l (ENSELUG00000019275) #25 ENSELUG00000019236 MEP1B (ENSELUG00000019128) PHLPP1 (ENSELUG00000019046) SIRT5 (ENSELUG00000018832) adcy1b (ENSELUG00000018779) IGFBP3 (ENSELUG00000018696) igfbp1b (ENSELUG00000025505) TNS3 (ENSELUG00000018646) DSP (ENSELUG00000018625) slc22a23 (ENSELUG00000018595) #20 ENSELUG00000034646 #22 ENSELUG00000000788 ENSELUG00000018430 CDH2 (ENSELUG00000018413) AQP4 (ENSELUG00000018339) KCTD1 (ENSELUG00000018289) ENSELUG00000025852 PSMA8 (ENSELUG00000018226) ss18 (ENSELUG00000018184) ZNF521 (ENSELUG00000018072) ENSELUG00000018026 OSBPL1A (ENSELUG00000017991) ENSELUG00000017890 ENSELUG00000017878 ENSELUG00000033588 TTC39C (ENSELUG00000000725) Salmoninae ANCESTRAL SPECIES 511 ENSGT00940000162937.a.b.f ENSGT00940000159059.j ENSGT00940000157153.w.d ENSGT00940000159347.i #25 ENSGT01100000263524.B.b.b.m.b ENSGT00940000158137.c.a.k ENSGT00940000155842.t.u.a ENSGT00940000156080.k ENSGT00940000154872.A.c ENSGT00940000157394.b.e ENSGT00940000158092.p.a ENSGT00940000156328.a.a.b.j ENSGT00940000154843.F.c.a.e ENSGT00940000157354.j.f.a.a #20 ENSGT00940000157354.j.e #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b.i ENSGT01030000234624.a.s.a Huchen DUPLICATION Huchen MODERN SPECIES 215 ripk1l (ENSHHUG00000023299) #25 ENSHHUG00000023281 ENSHHUG00000023280 PHLPP1 (ENSHHUG00000023257) ENSHHUG00000023240 ENSHHUG00000023237 ENSHHUG00000023231 ENSHHUG00000023225 adcy1b (ENSHHUG00000023201) igfbp1b (ENSHHUG00000023188) IGFBP3 (ENSHHUG00000023178) TNS3 (ENSHHUG00000023144) DSP (ENSHHUG00000022995) ENSHHUG00000022981 #20 ENSHHUG00000022970 #20 tubb2 (ENSHHUG00000022960) #22 ENSHHUG00000022932 ENSHHUG00000022862 ENSHHUG00000022861 DSEL (ENSHHUG00000022857) ENSHHUG00000022847 CDH7 (ENSHHUG00000022043) ENSHHUG00000022016 impa1 (ENSHHUG00000022004) ENSHHUG00000021971 ENSHHUG00000021948 ENSHHUG00000021923 ENSHHUG00000021911 ENSHHUG00000021899 ENSHHUG00000021892 zgc:111976 (ENSHHUG00000021861) Huchen MODERN SPECIES 5638 ENSHHUG00000029648 #20 ENSHHUG00000029632 #22 ENSHHUG00000029619 Salmoninae_a DUPLICATION Salmoninae_a DUPLICATION Salmoninae_a ANCESTRAL SPECIES 6 ENSGT00940000163866.a.a.g ENSGT00940000162937.a.b.f ENSGT00940000159059.j ENSGT00940000157153.w.d ENSGT00940000159347.i #25 ENSGT01100000263524.B.b.b.m.b ENSGT00940000158137.c.a.k ENSGT00940000155842.t.u.a ENSGT00940000156080.k ENSGT00940000154872.A.c ENSGT00940000157394.b.e ENSGT00940000158092.p.a ENSGT00940000156328.a.a.b.j ENSGT00940000154843.F.c.a.e ENSGT00940000157354.j.f.a.a #20 ENSGT00940000154150.df.a #22 ENSGT01030000234624.b.b.c.b.i ENSGT01030000234624.a.s.a ENSGT00940000155981.g.d ENSGT00940000156037.a.f.b ENSGT00940000156453.a.i ENSGT00940000160354.i.a ENSGT00940000156352.e.a ENSGT00940000159287.k ENSGT00940000155295.z.e ENSGT00970000194032.b ENSGT00990000204641.a ENSGT00950000182917.b.a.a.f ENSGT00940000155638.wb.a.lb.b ENSGT00940000154973.a.a.c ENSGT00940000156961.a Oncorhynchus ANCESTRAL SPECIES 15 ENSGT00940000163866.a.a.g ENSGT00940000162937.a.b.f ENSGT00940000159059.j ENSGT00940000157153.w.d ENSGT00940000159347.i #25 ENSGT01100000263524.B.b.b.m.b ENSGT00940000158137.c.a.k ENSGT00940000155842.t.u.a ENSGT00940000156080.k ENSGT00940000154872.A.c ENSGT00940000157394.b.e ENSGT00940000158092.p.b.a.b.a ENSGT00940000156328.a.a.b.j ENSGT00940000154843.F.c.a.e ENSGT00940000157354.j.f.a.a #20 ENSGT00940000154150.df.a #22 ENSGT01030000234624.b.b.c.b.i ENSGT01030000234624.a.s.a ENSGT00940000155981.g.d ENSGT00940000156037.a.f.b ENSGT00940000156453.a.i ENSGT00940000160354.i.a ENSGT00940000156352.e.a ENSGT00940000159287.k ENSGT00940000155295.z.e ENSGT00970000194032.b ENSGT00990000204641.a ENSGT00950000182917.b.a.a.f ENSGT00940000154973.a.a.c ENSGT00940000156961.a ENSGT01090000260003.a.b.b.a.a.b.a.b.b.h Oncorhynchus_a ANCESTRAL SPECIES 22 ENSGT00940000163866.a.a.g ENSGT00940000162937.a.b.f ENSGT00940000159059.j ENSGT00940000157153.w.d ENSGT00940000159347.i #25 ENSGT01100000263524.B.b.b.m.b ENSGT00940000158137.c.a.k ENSGT00940000155842.t.u.a ENSGT00940000156080.k ENSGT00940000154872.A.c ENSGT00940000157394.b.e ENSGT00940000158092.p.a ENSGT00940000156328.a.a.b.j ENSGT00940000154843.F.c.a.e ENSGT00940000157354.j.f.a.a #20 ENSGT00940000154150.df.a #22 ENSGT01030000234624.b.b.c.b.i ENSGT01030000234624.a.s.a ENSGT00940000155981.g.d ENSGT00940000156037.a.f.b ENSGT00940000156453.a.i ENSGT00940000160354.i.a ENSGT00940000156352.e.a ENSGT00940000159287.k ENSGT00940000155295.z.e ENSGT00970000194032.b ENSGT00990000204641.a ENSGT00950000182917.b.a.a.f ENSGT00940000154973.a.a.c ENSGT00940000156961.a ENSGT01090000260003.a.b.b.a.a.b.a.b.b.h Coho salmon MODERN SPECIES 19 foxf2a (ENSOKIG00005027300) foxq1a (ENSOKIG00005027304) irf4a (ENSOKIG00005027316) dusp22b (ENSOKIG00005027347) ripk1l (ENSOKIG00005027370) #25 opn7a (ENSOKIG00005027394) PHLPP1 (ENSOKIG00005027458) PHACTR1 (ENSOKIG00005028032) ENSOKIG00005028044 ADCY1 (ENSOKIG00005028104) IGFBP1 (ENSOKIG00005028491) IGFBP3 (ENSOKIG00005028528) TNS3 (ENSOKIG00005028568) DSP (ENSOKIG00005028793) SLC22A23 (ENSOKIG00005006310) #20 tubb2 (ENSOKIG00005006339) #22 ENSOKIG00005006373 ENSOKIG00005006438 CDH2 (ENSOKIG00005006649) ENSOKIG00005010445 AQP4 (ENSOKIG00005010450) KCTD1 (ENSOKIG00005010470) ENSOKIG00005010482 PSMA8 (ENSOKIG00005010511) SS18 (ENSOKIG00005011033) ZNF521 (ENSOKIG00005011096) OSBPL1A (ENSOKIG00005011331) ENSOKIG00005015888 TTC39C (ENSOKIG00005015903) vps4b (ENSOKIG00005016233) kdsr (ENSOKIG00005016331) Rainbow trout MODERN SPECIES 20 foxq1a (ENSOMYG00000026767) irf-10 (ENSOMYG00000026797) dusp22b (ENSOMYG00000058162) ripk1l (ENSOMYG00000026838) #25 ENSOMYG00000026853 ENSOMYG00000026874 ENSOMYG00000027168 ENSOMYG00000027677 ENSOMYG00000027684 ADCY1 (ENSOMYG00000027934) IGFBP1 (ENSOMYG00000028256) IGFBP3 (ENSOMYG00000028231) TNS3 (ENSOMYG00000028397) ENSOMYG00000029385 ENSOMYG00000031366 #20 tubb2 (ENSOMYG00000031371) #22 ENSOMYG00000031415 ENSOMYG00000031533 CDH2 (ENSOMYG00000032107) AQP4 (ENSOMYG00000035014) KCTD1 (ENSOMYG00000035049) PSMA8 (ENSOMYG00000035075) SS18 (ENSOMYG00000035116) ZNF521 (ENSOMYG00000035153) OSBPL1A (ENSOMYG00000035356) ENSOMYG00000036421 TTC39C (ENSOMYG00000036476) vps4b (ENSOMYG00000036845) kdsr (ENSOMYG00000038764) BCL2 (ENSOMYG00000038826) ENSOMYG00000039790 Salmo ANCESTRAL SPECIES 5 ENSGT00940000163866.a.a.g ENSGT00940000162937.a.b.f ENSGT00940000159059.j ENSGT00940000157153.w.d ENSGT00940000159347.i #25 ENSGT01100000263524.B.b.b.m.b ENSGT00940000158137.c.a.k ENSGT00940000155842.t.u.a ENSGT00940000156080.k ENSGT00940000154872.A.c ENSGT00940000157394.b.e ENSGT00940000158092.p.a ENSGT00940000156328.a.a.b.j ENSGT00940000154843.F.c.a.e ENSGT00940000157354.j.f.b #20 ENSGT00940000154150.df.a #22 ENSGT01030000234624.b.b.c.b.i ENSGT01030000234624.a.s.a ENSGT00940000155981.g.d ENSGT00940000156037.a.f.b ENSGT00940000156453.a.i ENSGT00940000160354.i.a ENSGT00940000156352.e.a ENSGT00940000159287.k ENSGT00940000155295.z.e ENSGT00970000194032.b ENSGT00990000204641.a ENSGT00950000182917.b.a.a.f ENSGT00940000155638.wb.a.lb.b ENSGT00940000154973.a.a.c ENSGT00940000156961.a Atlantic salmon MODERN SPECIES 22 ENSSSAG00000109351 ENSSSAG00000001975 ENSSSAG00000001949 ENSSSAG00000119789 ENSSSAG00000084777 ENSSSAG00000093664 ENSSSAG00000001858 ADCY1 (ENSSSAG00000001783) IGFBP1 (ENSSSAG00000001734) ENSSSAG00000097769 IGFBP3 (ENSSSAG00000105062) ENSSSAG00000101425 TNS3 (ENSSSAG00000001460) ENSSSAG00000001063 ENSSSAG00000110683 #20 tubb2 (ENSSSAG00000086767) #22 ENSSSAG00000000957 ENSSSAG00000000942 CDH2 (ENSSSAG00000000678) AQP4 (ENSSSAG00000000411) KCTD1 (ENSSSAG00000000399) PSA7 (ENSSSAG00000000364) SS18 (ENSSSAG00000082109) ZNF521 (ENSSSAG00000000242) OSBPL1A (ENSSSAG00000078714) ENSSSAG00000078667 TTC39C (ENSSSAG00000078611) LAMA3 (ENSSSAG00000078246) vps4b (ENSSSAG00000077506) ENSSSAG00000107931 kdsr (ENSSSAG00000077312) River trout MODERN SPECIES 24 foxq1a (ENSSTUG00000016965) irf4a (ENSSTUG00000016969) dusp22b (ENSSTUG00000016989) ripk1l (ENSSTUG00000016994) #25 ENSSTUG00000017009 ENSSTUG00000017065 PHLPP1 (ENSSTUG00000017079) PHACTR1 (ENSSTUG00000017217) ENSSTUG00000017340 adcy1b (ENSSTUG00000017396) IGFBP1 (ENSSTUG00000017860) IGFBP3 (ENSSTUG00000017865) TNS3 (ENSSTUG00000017882) DSP (ENSSTUG00000018301) SLC22A23 (ENSSTUG00000020258) #20 tubb2 (ENSSTUG00000020266) #22 ENSSTUG00000020309 ENSSTUG00000020465 CDH2 (ENSSTUG00000020664) AQP4 (ENSSTUG00000025027) KCTD1 (ENSSTUG00000025255) PSMA8 (ENSSTUG00000025289) ss18 (ENSSTUG00000025621) ZNF521 (ENSSTUG00000025747) OSBPL1A (ENSSTUG00000025792) ENSSTUG00000026346 TTC39C (ENSSTUG00000026364) vps4b (ENSSTUG00000026545) kdsr (ENSSTUG00000028052) BCL2 (ENSSTUG00000028266) ENSSTUG00000028274 Salmoninae_a ANCESTRAL SPECIES 2 ENSGT00940000157153.w.c ENSGT00940000159347.j #25 ENSGT01100000263524.B.b.b.m.a ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a.l ENSGT00940000155842.t.v ENSGT00940000155842.t.u.b ENSGT00940000182575 ENSGT00940000154872.A.d ENSGT00940000157394.b.f ENSGT00940000158092.p.b.b ENSGT00940000156328.a.a.b.i ENSGT00940000154843.F.c.a.f ENSGT00940000157354.j.e #20 ENSGT00940000154150.df.b #22 ENSGT01030000234624.b.b.c.b.j ENSGT01030000234624.a.s.b ENSGT00940000155981.g.c ENSGT00940000156037.a.f.a ENSGT00940000156453.a.j ENSGT00940000160354.i.b ENSGT00940000156352.e.b ENSGT00940000159287.l ENSGT00940000163206.b.a.b ENSGT00940000155295.z.f ENSGT00970000194032.a ENSGT00950000182917.b.a.a.e ENSGT00940000155638.wb.a.mb ENSGT00940000154973.a.a.d ENSGT00940000156961.b Oncorhynchus ANCESTRAL SPECIES 11 ENSGT00940000162937.a.b.e ENSGT00940000159059.i ENSGT00940000157153.w.c ENSGT00940000159347.j #25 ENSGT01100000263524.B.b.b.m.a ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a.l ENSGT00940000155842.t.u.b ENSGT00940000154872.A.d ENSGT00940000157394.b.f ENSGT00940000158092.p.b.b ENSGT00940000156328.a.a.b.i ENSGT00940000154843.F.c.a.f ENSGT00940000157354.j.e #20 ENSGT00940000154150.df.b #22 ENSGT01030000234624.b.b.c.b.j ENSGT01030000234624.a.s.b ENSGT00940000155981.g.c ENSGT00940000156037.a.f.a ENSGT00940000156453.a.j ENSGT00940000160354.i.b ENSGT00940000156352.e.b ENSGT00940000159287.l ENSGT00940000163206.b.a.b ENSGT00940000155295.z.f ENSGT00950000182917.b.a.a.e ENSGT00940000155638.wb.a.mb ENSGT00940000154973.a.a.d ENSGT00940000156961.b ENSGT01090000260003.a.b.b.a.a.b.a.b.b.g Oncorhynchus_a ANCESTRAL SPECIES 24 ENSGT00940000162937.a.b.e ENSGT00940000159059.i ENSGT00940000157153.w.c ENSGT00940000159347.j #25 ENSGT01100000263524.B.b.b.m.a ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a.l ENSGT00940000155842.t.u.b ENSGT00940000154872.A.d ENSGT00940000157394.b.f ENSGT00940000158092.p.b.b ENSGT00940000156328.a.a.b.i ENSGT00940000154843.F.c.a.f ENSGT00940000157354.j.e #20 ENSGT00940000154150.df.b #22 ENSGT01030000234624.b.b.c.b.j ENSGT01030000234624.a.s.b ENSGT00940000155981.g.c ENSGT00940000156037.a.f.a ENSGT00940000156453.a.j ENSGT00940000160354.i.b ENSGT00940000156352.e.b ENSGT00940000159287.l ENSGT00940000163206.b.a.b ENSGT00940000155295.z.f ENSGT00950000182917.b.a.a.e ENSGT00940000155638.wb.a.mb ENSGT00940000154973.a.a.d ENSGT00940000156961.b ENSGT01090000260003.a.b.b.a.a.b.a.b.b.g Chinook salmon DUPLICATION Chinook salmon MODERN SPECIES 1 irf4a (ENSOTSG00005047622) dusp22b (ENSOTSG00005047620) ripk1l (ENSOTSG00005047619) #25 opn7a (ENSOTSG00005047616) ENSOTSG00005047612 MEP1B (ENSOTSG00005047611) PHLPP1 (ENSOTSG00005047603) PHACTR1 (ENSOTSG00005047601) adcy1b (ENSOTSG00005047597) igfbp1b (ENSOTSG00005047593) IGFBP3 (ENSOTSG00005047592) TNS3 (ENSOTSG00005047579) DSP (ENSOTSG00005047444) SLC22A23 (ENSOTSG00005047429) #20 ENSOTSG00005047428 #22 tubb2 (ENSOTSG00005047427) #22 ENSOTSG00005047426 ENSOTSG00005047425 CDH2 (ENSOTSG00005046663) AQP4 (ENSOTSG00005046661) KCTD1 (ENSOTSG00005046660) PSMA8 (ENSOTSG00005046659) ss18 (ENSOTSG00005046658) ZNF521 (ENSOTSG00005046657) ENSOTSG00005046656 OSBPL1A (ENSOTSG00005046095) TTC39C (ENSOTSG00005046093) LAMA3 (ENSOTSG00005046092) vps4b (ENSOTSG00005046091) kdsr (ENSOTSG00005046082) BCL2 (ENSOTSG00005046080) Chinook salmon MODERN SPECIES 1 foxq1a (ENSOTSG00005047624) irf4a (ENSOTSG00005047622) dusp22b (ENSOTSG00005047620) ripk1l (ENSOTSG00005047619) #25 opn7a (ENSOTSG00005047616) ENSOTSG00005047612 MEP1B (ENSOTSG00005047611) PHLPP1 (ENSOTSG00005047603) PHACTR1 (ENSOTSG00005047601) adcy1b (ENSOTSG00005047597) igfbp1b (ENSOTSG00005047593) IGFBP3 (ENSOTSG00005047592) TNS3 (ENSOTSG00005047579) DSP (ENSOTSG00005047444) SLC22A23 (ENSOTSG00005047429) #20 ENSOTSG00005047428 #22 tubb2 (ENSOTSG00005047427) #22 ENSOTSG00005047426 ENSOTSG00005047425 CDH2 (ENSOTSG00005046663) AQP4 (ENSOTSG00005046661) KCTD1 (ENSOTSG00005046660) PSMA8 (ENSOTSG00005046659) ss18 (ENSOTSG00005046658) ZNF521 (ENSOTSG00005046657) ENSOTSG00005046656 OSBPL1A (ENSOTSG00005046095) TTC39C (ENSOTSG00005046093) LAMA3 (ENSOTSG00005046092) vps4b (ENSOTSG00005046091) kdsr (ENSOTSG00005046082) Coho salmon MODERN SPECIES 23 foxq1a (ENSOKIG00005030027) irf4a (ENSOKIG00005029995) dusp22b (ENSOKIG00005029978) ripk1l (ENSOKIG00005029960) #25 ENSOKIG00005029927 ENSOKIG00005029898 MEP1B (ENSOKIG00005029850) PHLPP1 (ENSOKIG00005029438) ENSOKIG00005029394 PHACTR1 (ENSOKIG00005029337) adcy1b (ENSOKIG00005029062) IGFBP1 (ENSOKIG00005028999) IGFBP3 (ENSOKIG00005028986) TNS3 (ENSOKIG00005028639) DSP (ENSOKIG00005026305) ENSOKIG00005026167 #22 ENSOKIG00005026096 ENSOKIG00005025941 CDH2 (ENSOKIG00005021087) ENSOKIG00005020744 AQP4 (ENSOKIG00005020735) KCTD1 (ENSOKIG00005020710) PSMA8 (ENSOKIG00005020644) ss18 (ENSOKIG00005020593) ENSOKIG00005045657 ZNF521 (ENSOKIG00005045641) ENSOKIG00005045614 ENSOKIG00005045609 OSBPL1A (ENSOKIG00005045274) TTC39C (ENSOKIG00005044770) LAMA3 (ENSOKIG00005044670) Rainbow trout MODERN SPECIES 29 ENSOMYG00000004133 ENSOMYG00000004091 ENSOMYG00000003525 ENSOMYG00000053000 ENSOMYG00000066510 ENSOMYG00000003057 ENSOMYG00000050787 ENSOMYG00000070003 ADCY1 (ENSOMYG00000002880) igfbp1 (ENSOMYG00000002616) IGFBP3 (ENSOMYG00000002589) TNS3 (ENSOMYG00000002544) ENSOMYG00000002065 ENSOMYG00000048629 ENSOMYG00000001493 #20 tubb2 (ENSOMYG00000001436) #22 ENSOMYG00000001398 ENSOMYG00000042640 CDH2 (ENSOMYG00000038138) ENSOMYG00000066444 AQP4 (ENSOMYG00000037366) ENSOMYG00000069120 KCTD1 (ENSOMYG00000037337) PSMA8 (ENSOMYG00000037281) ENSOMYG00000077031 SS18 (ENSOMYG00000037239) ENSOMYG00000047922 ENSOMYG00000068421 ZNF521 (ENSOMYG00000037181) ENSOMYG00000037106 OSBPL1A (ENSOMYG00000036811) Salmo ANCESTRAL SPECIES 21 ENSGT00940000157153.w.c ENSGT00940000159347.j #25 ENSGT01100000263524.B.b.b.m.a ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a.l ENSGT00940000155842.t.v ENSGT00940000155842.t.u.b ENSGT00940000154872.A.d ENSGT00940000157394.b.f ENSGT00990000211270 ENSGT00940000158092.p.b.b ENSGT00940000156328.a.a.b.i ENSGT00940000154843.F.c.a.f ENSGT00940000157354.j.e #20 ENSGT00940000154150.df.b #22 ENSGT01030000234624.b.b.c.b.j ENSGT01030000234624.a.s.b ENSGT00940000155981.g.c ENSGT00940000156037.a.f.a ENSGT00940000156453.a.j ENSGT00940000160354.i.b ENSGT00940000156352.e.b ENSGT00940000159287.l ENSGT00940000163206.b.a.b ENSGT00940000155295.z.f ENSGT00970000194032.a ENSGT00950000182917.b.a.a.e ENSGT00940000155638.wb.a.mb ENSGT00940000154973.a.a.d ENSGT00940000156961.b Atlantic salmon MODERN SPECIES 5 ripk1 (ENSSSAG00000080317) #25 ENSSSAG00000110993 rnf138 (ENSSSAG00000080311) ENSSSAG00000080306 ENSSSAG00000114392 ENSSSAG00000080265 ENSSSAG00000001879 ENSSSAG00000088530 ADCY1 (ENSSSAG00000080202) ENSSSAG00000091522 ENSSSAG00000080191 IGFBP3 (ENSSSAG00000080183) TNS3 (ENSSSAG00000079851) ENSSSAG00000079718 ENSSSAG00000090689 #20 tbb2a (ENSSSAG00000079687) #22 ENSSSAG00000079678 ENSSSAG00000079671 CDH2 (ENSSSAG00000079622) AQP4 (ENSSSAG00000079610) KCTD1 (ENSSSAG00000079600) PSMA8 (ENSSSAG00000079572) SS18 (ENSSSAG00000079554) ZNF521 (ENSSSAG00000079536) ENSSSAG00000079532 OSBPL1A (ENSSSAG00000079414) TTC39C (ENSSSAG00000103768) LAMA3 (ENSSSAG00000079146) vps4b (ENSSSAG00000079067) kdsr (ENSSSAG00000079039) BCL2 (ENSSSAG00000079029) River trout MODERN SPECIES 13 dusp22b (ENSSTUG00000050557) ripk1l (ENSSTUG00000050555) #25 ENSSTUG00000050553 ENSSTUG00000050551 MEP1B (ENSSTUG00000050545) PHLPP1 (ENSSTUG00000050534) ENSSTUG00000050529 PHACTR1 (ENSSTUG00000050520) adcy1b (ENSSTUG00000050469) IGFBP1 (ENSSTUG00000050461) ENSSTUG00000050460 IGFBP3 (ENSSTUG00000050458) TNS3 (ENSSTUG00000050372) DSP (ENSSTUG00000050348) SLC22A23 (ENSSTUG00000050342) #20 tubb2 (ENSSTUG00000050337) #22 ENSSTUG00000050328 ENSSTUG00000050320 ENSSTUG00000050301 CDH2 (ENSSTUG00000049609) AQP4 (ENSSTUG00000049563) KCTD1 (ENSSTUG00000049559) PSMA8 (ENSSTUG00000049555) ss18 (ENSSTUG00000049539) ZNF521 (ENSSTUG00000049525) ENSSTUG00000049524 ENSSTUG00000049518 OSBPL1A (ENSSTUG00000048639) ENSSTUG00000048593 TTC39C (ENSSTUG00000048399) LAMA3 (ENSSTUG00000048317) Salmoninae_a ANCESTRAL SPECIES ENSGT00940000154150.ef #22 Oncorhynchus ANCESTRAL SPECIES ENSGT00940000154150.ef #22 Oncorhynchus_a ANCESTRAL SPECIES ENSGT00940000154150.ef #22 Chinook salmon MODERN SPECIES 20 foxf2a (ENSOTSG00005044456) foxq1a (ENSOTSG00005044457) irf4a (ENSOTSG00005044458) dusp22b (ENSOTSG00005044459) ripk1l (ENSOTSG00005044460) #25 opn7a (ENSOTSG00005044461) PHLPP1 (ENSOTSG00005044502) ENSOTSG00005044518 SIRT5 (ENSOTSG00005044520) adcy1b (ENSOTSG00005044529) igfbp1b (ENSOTSG00005044829) IGFBP3 (ENSOTSG00005044830) TNS3 (ENSOTSG00005044832) DSP (ENSOTSG00005044853) slc22a23 (ENSOTSG00005045613) #20 ENSOTSG00005045615 #22 ENSOTSG00005045618 ENSOTSG00005045620 CDH2 (ENSOTSG00005045646) ENSOTSG00005046832 tfr2 (ENSOTSG00005046833) AQP4 (ENSOTSG00005046834) KCTD1 (ENSOTSG00005046835) PSMA8 (ENSOTSG00005046837) ss18 (ENSOTSG00005046838) ZNF521 (ENSOTSG00005046839) OSBPL1A (ENSOTSG00005046841) ENSOTSG00005046883 ENSOTSG00005002612 TTC39C (ENSOTSG00005002810) vps4b (ENSOTSG00005003893) Acanthomorphata ANCESTRAL SPECIES ENSGT00940000163866.a.a ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Cod MODERN SPECIES 21 yes1 (ENSGMOG00000007146) adcyap1b (ENSGMOG00000007155) ENSGMOG00000032714 EMILIN2 (ENSGMOG00000036485) ENSGMOG00000005291 myom1a (ENSGMOG00000005326) ENSGMOG00000007370 ENSGMOG00000032975 ENSGMOG00000027155 e2f5 (ENSGMOG00000012711) IGFBP1 (ENSGMOG00000013011) ENSGMOG00000022250 TNS3 (ENSGMOG00000013032) ENSGMOG00000013073 ENSGMOG00000032764 #20 ENSGMOG00000035818 #22 ENSGMOG00000013127 ENSGMOG00000013140 CDH2 (ENSGMOG00000002921) AQP4 (ENSGMOG00000032654) KCTD1 (ENSGMOG00000002982) PSMA8 (ENSGMOG00000002995) SS18 (ENSGMOG00000003018) ZNF521 (ENSGMOG00000003035) ENSGMOG00000003059 OSBPL1A (ENSGMOG00000003066) TTC39C (ENSGMOG00000003129) LAMA3 (ENSGMOG00000003159) vps4b (ENSGMOG00000003324) kdsr (ENSGMOG00000003350) BCL2 (ENSGMOG00000029862) Euacanthomorphacea ANCESTRAL SPECIES 4 ENSGT00940000163866.a.a ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Pinecone sodierfish MODERN SPECIES 8 dusp22b (ENSMMDG00005021861) ripk1l (ENSMMDG00005021858) #25 opn7a (ENSMMDG00005021783) MEP1B (ENSMMDG00005021769) PHLPP1 (ENSMMDG00005021758) ENSMMDG00005021753 PHACTR1 (ENSMMDG00005021752) SIRT5 (ENSMMDG00005021750) adcy1b (ENSMMDG00005021745) igfbp1b (ENSMMDG00005021740) IGFBP3 (ENSMMDG00005021738) ENSMMDG00005021726 ENSMMDG00005021722 DSP (ENSMMDG00005021716) slc22a23 (ENSMMDG00005021710) #20 tubb2 (ENSMMDG00005021687) #22 ENSMMDG00005021685 ENSMMDG00005021681 CDH2 (ENSMMDG00005021050) AQP4 (ENSMMDG00005021026) KCTD1 (ENSMMDG00005021020) psma8 (ENSMMDG00005021016) ss18 (ENSMMDG00005021012) ZNF521 (ENSMMDG00005021011) ENSMMDG00005020992 OSBPL1A (ENSMMDG00005017331) TTC39C (ENSMMDG00005017229) ENSMMDG00005017213 ENSMMDG00005017208 vps4b (ENSMMDG00005017163) kdsr (ENSMMDG00005017088) Percomorphaceae ANCESTRAL SPECIES 6 ENSGT00940000163866.a.a ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Tiger tail seahorse MODERN SPECIES 277 foxq1a (ENSHCOG00000020294) irf4a (ENSHCOG00000020303) dusp22b (ENSHCOG00000020341) ripk1l (ENSHCOG00000020345) #25 opn7a (ENSHCOG00000020385) MEP1B (ENSHCOG00000020393) PHLPP1 (ENSHCOG00000020453) PHACTR1 (ENSHCOG00000020494) SIRT5 (ENSHCOG00000020510) adcy1b (ENSHCOG00000020550) igfbp1b (ENSHCOG00000020561) IGFBP3 (ENSHCOG00000020646) TNS3 (ENSHCOG00000020753) DSP (ENSHCOG00000020775) slc22a23 (ENSHCOG00000020796) #20 tubb2 (ENSHCOG00000020921) #22 ENSHCOG00000020945 dsc2l (ENSHCOG00000020948) CDH2 (ENSHCOG00000020987) AQP4 (ENSHCOG00000020996) KCTD1 (ENSHCOG00000021009) psma8 (ENSHCOG00000021052) ss18 (ENSHCOG00000021070) ZNF521 (ENSHCOG00000003388) ENSHCOG00000003394 OSBPL1A (ENSHCOG00000003408) TTC39C (ENSHCOG00000003485) ENSHCOG00000003515 ENSHCOG00000003530 vps4b (ENSHCOG00000003587) kdsr (ENSHCOG00000003613) Percomorphaceae_B ANCESTRAL SPECIES 8 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Ovalentaria ANCESTRAL SPECIES 5 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Atherinomorphae ANCESTRAL SPECIES 4 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Oryzias ANCESTRAL SPECIES 12 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000175716 ENSGT00940000154973.a.a ENSGT00940000156961 Oryzias_b ANCESTRAL SPECIES 8 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000175716 ENSGT00940000154973.a.a ENSGT00940000156961 Javanese ricefish MODERN SPECIES 8 foxq1a (ENSOJAG00000014436) irf4a (ENSOJAG00000014411) dusp22b (ENSOJAG00000014404) ripk1l (ENSOJAG00000014388) #25 ENSOJAG00000014354 MEP1B (ENSOJAG00000014338) PHLPP1 (ENSOJAG00000014165) PHACTR1 (ENSOJAG00000014099) SIRT5 (ENSOJAG00000014078) adcy1b (ENSOJAG00000013940) igfbp1b (ENSOJAG00000013905) IGFBP3 (ENSOJAG00000013874) TNS3 (ENSOJAG00000013443) DSP (ENSOJAG00000012694) slc22a23 (ENSOJAG00000012659) #20 tubb2 (ENSOJAG00000012588) #22 ENSOJAG00000012569 dsc2l (ENSOJAG00000012505) CDH2 (ENSOJAG00000010488) AQP4 (ENSOJAG00000010251) KCTD1 (ENSOJAG00000010204) psma8 (ENSOJAG00000010085) ss18 (ENSOJAG00000010056) ZNF521 (ENSOJAG00000009908) ENSOJAG00000009881 OSBPL1A (ENSOJAG00000009598) TTC39C (ENSOJAG00000009476) vps4b (ENSOJAG00000023380) kdsr (ENSOJAG00000023342) ENSOJAG00000023338 PRKAG2 (ENSOJAG00000022884) Indian medaka MODERN SPECIES 10 irf4a (ENSOMEG00000005225) dusp22b (ENSOMEG00000005206) ripk1l (ENSOMEG00000005184) #25 opn7a (ENSOMEG00000005163) MEP1B (ENSOMEG00000005145) PHLPP1 (ENSOMEG00000005099) PHACTR1 (ENSOMEG00000004987) SIRT5 (ENSOMEG00000004922) ENSOMEG00000004894 adcy1b (ENSOMEG00000004767) IGFBP1 (ENSOMEG00000004680) IGFBP3 (ENSOMEG00000004654) TNS3 (ENSOMEG00000004596) DSP (ENSOMEG00000004499) SLC22A23 (ENSOMEG00000004421) #20 tubb2 (ENSOMEG00000004353) #22 ENSOMEG00000004342 dsc2l (ENSOMEG00000004331) CDH2 (ENSOMEG00000004301) AQP4 (ENSOMEG00000001022) KCTD1 (ENSOMEG00000004223) psma8 (ENSOMEG00000004187) ss18 (ENSOMEG00000004158) ZNF521 (ENSOMEG00000004084) ENSOMEG00000004040 ENSOMEG00000004034 ENSOMEG00000004018 TTC39C (ENSOMEG00000003999) ENSOMEG00000003956 ENSOMEG00000003887 ENSOMEG00000003863 Oryzias_a ANCESTRAL SPECIES 7 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00950000182917.b.b ENSGT00940000155638.wb.a ENSGT00940000175716 ENSGT00940000154973.a.a Japanese Medaka HdrR MODERN SPECIES 8 foxq1a (ENSORLG00000022023) irf4a (ENSORLG00000017242) dusp22b (ENSORLG00000030334) ripk1l (ENSORLG00000017231) #25 ENSORLG00000017226 MEP1B (ENSORLG00000017217) PHLPP1 (ENSORLG00000017203) ENSORLG00000017195 ENSORLG00000017188 adcy1b (ENSORLG00000017169) igfbp1b (ENSORLG00000017161) IGFBP3 (ENSORLG00000017149) TNS3 (ENSORLG00000017139) DSP (ENSORLG00000017125) ENSORLG00000017117 #20 tubb2 (ENSORLG00000017113) #22 ENSORLG00000017110 dsc2l (ENSORLG00000017106) cdh2 (ENSORLG00000017084) AQP4 (ENSORLG00000017012) KCTD1 (ENSORLG00000016995) psma8 (ENSORLG00000027101) ss18 (ENSORLG00000016977) ZNF521 (ENSORLG00000016949) ENSORLG00000016939 ENSORLG00000022929 OSBPL1A (ENSORLG00000016922) TTC39C (ENSORLG00000016907) ENSORLG00000025340 ENSORLG00000016886 ENSORLG00000029606 Chinese medaka MODERN SPECIES 741 irf4a (ENSOSIG00000014532) dusp22b (ENSOSIG00000014539) ripk1l (ENSOSIG00000014544) #25 opn7a (ENSOSIG00000014546) MEP1B (ENSOSIG00000014553) PHLPP1 (ENSOSIG00000014572) ENSOSIG00000014614 ENSOSIG00000014615 SIRT5 (ENSOSIG00000014616) adcy1b (ENSOSIG00000014625) igfbp1b (ENSOSIG00000015002) IGFBP3 (ENSOSIG00000015004) TNS3 (ENSOSIG00000015005) DSP (ENSOSIG00000015032) SLC22A23 (ENSOSIG00000016137) #20 tubb2 (ENSOSIG00000016140) #22 ENSOSIG00000016194 dsc2l (ENSOSIG00000016201) CDH2 (ENSOSIG00000016358) AQP4 (ENSOSIG00000020392) ENSOSIG00000020397 ss18 (ENSOSIG00000020412) psma8 (ENSOSIG00000020419) ZNF521 (ENSOSIG00000020440) ENSOSIG00000020441 OSBPL1A (ENSOSIG00000020452) ENSOSIG00000020478 vps4b (ENSOSIG00000020510) kdsr (ENSOSIG00000020808) BCL2 (ENSOSIG00000020811) ENSOSIG00000020823 Cyprinodontiformes ANCESTRAL SPECIES 5 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Cyprinodontoidei ANCESTRAL SPECIES 2 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Poeciliinae ANCESTRAL SPECIES 6 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Poecilia ANCESTRAL SPECIES 16 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000175716 ENSGT00940000154973.a.a ENSGT00940000156961 NAME_6 ANCESTRAL SPECIES 11 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000175716 ENSGT00940000154973.a.a ENSGT00940000156961 Amazon molly MODERN SPECIES 355 PHLPP1 (ENSPFOG00000000119) PHACTR1 (ENSPFOG00000000187) SIRT5 (ENSPFOG00000000225) adcy1b (ENSPFOG00000000275) igfbp1b (ENSPFOG00000000389) IGFBP3 (ENSPFOG00000000425) TNS3 (ENSPFOG00000000477) DSP (ENSPFOG00000000696) slc22a23 (ENSPFOG00000000854) #20 tubb2 (ENSPFOG00000000911) #22 ENSPFOG00000001104 DSC1 (ENSPFOG00000001588) CDH2 (ENSPFOG00000001883) AQP4 (ENSPFOG00000002247) KCTD1 (ENSPFOG00000002282) psma8 (ENSPFOG00000002326) ss18 (ENSPFOG00000002394) ZNF521 (ENSPFOG00000002544) ENSPFOG00000002644 OSBPL1A (ENSPFOG00000002704) TTC39C (ENSPFOG00000003056) LAMA3 (ENSPFOG00000003277) vps4b (ENSPFOG00000004886) kdsr (ENSPFOG00000005119) BCL2 (ENSPFOG00000005254) Sailfin molly MODERN SPECIES 1007 ENSPLAG00000019090 DSP (ENSPLAG00000019042) slc22a23 (ENSPLAG00000018946) #20 tubb2 (ENSPLAG00000000569) #22 ENSPLAG00000018892 dsc2l (ENSPLAG00000018853) Guppy MODERN SPECIES 447 ENSPREG00000006569 rock1 (ENSPREG00000006471) IRF4 (ENSPREG00000006448) ENSPREG00000006382 opn7a (ENSPREG00000006325) MEP1B (ENSPREG00000006193) PHLPP1 (ENSPREG00000006112) PHACTR1 (ENSPREG00000006064) SIRT5 (ENSPREG00000006045) adcy1b (ENSPREG00000005997) igfbp1b (ENSPREG00000005763) IGFBP3 (ENSPREG00000005716) TNS3 (ENSPREG00000005624) DSP (ENSPREG00000005396) SLC22A23 (ENSPREG00000005290) #20 tubb2 (ENSPREG00000005152) #22 ENSPREG00000005081 dsc2l (ENSPREG00000004908) CDH2 (ENSPREG00000004831) AQP4 (ENSPREG00000004681) KCTD1 (ENSPREG00000004636) psma8 (ENSPREG00000004611) ss18 (ENSPREG00000004572) ENSPREG00000004550 ENSPREG00000004535 OSBPL1A (ENSPREG00000004467) TTC39C (ENSPREG00000004391) ENSPREG00000004352 vps4b (ENSPREG00000004314) kdsr (ENSPREG00000004276) BCL2 (ENSPREG00000004267) Platyfish DUPLICATION Platyfish MODERN SPECIES 20 foxq1a (ENSXMAG00000021726) irf4a (ENSXMAG00000017015) dusp22b (ENSXMAG00000023204) ripk1l (ENSXMAG00000016997) #25 opn7a (ENSXMAG00000016993) MEP1B (ENSXMAG00000016976) PHLPP1 (ENSXMAG00000016960) PHACTR1 (ENSXMAG00000016948) SIRT5 (ENSXMAG00000016935) adcy1b (ENSXMAG00000016898) igfbp1b (ENSXMAG00000016888) IGFBP3 (ENSXMAG00000028732) TNS3 (ENSXMAG00000016847) DSP (ENSXMAG00000016816) slc22a23 (ENSXMAG00000027849) #20 tubb2 (ENSXMAG00000016789) #22 ENSXMAG00000016745 dsc2l (ENSXMAG00000016712) CDH2 (ENSXMAG00000016663) AQP4 (ENSXMAG00000016658) KCTD1 (ENSXMAG00000016653) psma8 (ENSXMAG00000016624) ss18 (ENSXMAG00000016590) ZNF521 (ENSXMAG00000016577) ENSXMAG00000023966 OSBPL1A (ENSXMAG00000012174) TTC39C (ENSXMAG00000012148) ENSXMAG00000021209 ENSXMAG00000022508 vps4b (ENSXMAG00000016491) kdsr (ENSXMAG00000016480) Platyfish MODERN SPECIES 9 cntn5 (ENSXMAG00000007575) ARHGAP42 (ENSXMAG00000007558) pgr (ENSXMAG00000007553) trpc6a (ENSXMAG00000007545) ENSXMAG00000023671 yap1 (ENSXMAG00000007536) ENSXMAG00000007534 ENSXMAG00000028255 GAB2 (ENSXMAG00000015477) nars2 (ENSXMAG00000015442) tenm4 (ENSXMAG00000007490) FAM181B (ENSXMAG00000020233) prcp (ENSXMAG00000007481) rab30 (ENSXMAG00000025848) ENSXMAG00000023047 ENSXMAG00000028264 #22 ndufc2 (ENSXMAG00000023972) thrsp (ENSXMAG00000020232) guca1c (ENSXMAG00000007435) ENSXMAG00000021352 zgc:153184 (ENSXMAG00000029895) MLNR (ENSXMAG00000028025) FNDC3A (ENSXMAG00000007420) RCBTB2 (ENSXMAG00000007413) lpar6a (ENSXMAG00000020230) ENSXMAG00000007407 lhfpl6 (ENSXMAG00000007405) cog6 (ENSXMAG00000007388) foxo1a (ENSXMAG00000028449) SLC25A15 (ENSXMAG00000007371) STOML3 (ENSXMAG00000023044) NAME_4 ANCESTRAL SPECIES 19 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Sheepshead minnow MODERN SPECIES 491 MEP1B (ENSCVAG00000021821) PHLPP1 (ENSCVAG00000021844) PHACTR1 (ENSCVAG00000021901) SIRT5 (ENSCVAG00000021916) adcy1b (ENSCVAG00000021962) IGFBP1 (ENSCVAG00000021968) IGFBP3 (ENSCVAG00000021975) ENSCVAG00000022017 DSP (ENSCVAG00000022035) SLC22A23 (ENSCVAG00000022046) #20 tubb2 (ENSCVAG00000022054) #22 ENSCVAG00000022078 DSC1 (ENSCVAG00000022149) CDH2 (ENSCVAG00000022187) Mummichog MODERN SPECIES 314 dusp22b (ENSFHEG00000014798) ripk1l (ENSFHEG00000014819) #25 opn7a (ENSFHEG00000014883) ENSFHEG00000014906 MEP1B (ENSFHEG00000015055) PHLPP1 (ENSFHEG00000015164) ENSFHEG00000015196 ENSFHEG00000015206 SIRT5 (ENSFHEG00000015217) adcy1b (ENSFHEG00000015271) igfbp1b (ENSFHEG00000015291) IGFBP3 (ENSFHEG00000015298) TNS3 (ENSFHEG00000015421) DSP (ENSFHEG00000015442) slc22a23 (ENSFHEG00000015460) #20 ENSFHEG00000015474 #22 ENSFHEG00000015495 ENSFHEG00000015515 DSC1 (ENSFHEG00000015569) CDH2 (ENSFHEG00000015625) AQP4 (ENSFHEG00000015640) KCTD1 (ENSFHEG00000015661) psma8 (ENSFHEG00000015704) ss18 (ENSFHEG00000015714) ZNF521 (ENSFHEG00000000599) ENSFHEG00000015836 OSBPL1A (ENSFHEG00000015997) TTC39C (ENSFHEG00000016060) ENSFHEG00000016163 ENSFHEG00000016209 vps4b (ENSFHEG00000016319) Aplocheiloidei ANCESTRAL SPECIES 11 ENSGT00940000163866.a.a ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Turquoise killifish MODERN SPECIES 1618 ENSNFUG00015023065 ENSNFUG00015023066 ripk1l (ENSNFUG00015023069) #25 opn7a (ENSNFUG00015023088) MEP1B (ENSNFUG00015023097) PHLPP1 (ENSNFUG00015023102) PHACTR1 (ENSNFUG00015023123) ENSNFUG00015023158 adcy1b (ENSNFUG00015023171) igfbp1 (ENSNFUG00015023235) igfbp3 (ENSNFUG00015023248) ENSNFUG00015023253 TNS3 (ENSNFUG00015023268) DSP (ENSNFUG00015004891) SLC22A23 (ENSNFUG00015006019) #20 tubb2 (ENSNFUG00015006023) #22 ENSNFUG00015006033 DSC2L (ENSNFUG00015006058) CDH2 (ENSNFUG00015006188) AQP4 (ENSNFUG00015006581) KCTD15B (ENSNFUG00015006591) psma8 (ENSNFUG00015006600) SS18 (ENSNFUG00015006618) ENSNFUG00015006650 ZNF521 (ENSNFUG00015006661) CABZ01084564.1 (ENSNFUG00015006686) OSBPL1A (ENSNFUG00015006692) TTC39C (ENSNFUG00015006774) ENSNFUG00015006806 VPS4B (ENSNFUG00015006857) kdsr (ENSNFUG00015007481) Mangrove rivulus MODERN SPECIES 65 irf4a (ENSKMAG00000015009) ripk1l (ENSKMAG00000014984) #25 opn7a (ENSKMAG00000014956) MEP1B (ENSKMAG00000014925) PHLPP1 (ENSKMAG00000014856) ENSKMAG00000014817 PHACTR1 (ENSKMAG00000014734) SIRT5 (ENSKMAG00000014681) adcy1b (ENSKMAG00000014589) IGFBP1 (ENSKMAG00000014503) IGFBP3 (ENSKMAG00000014481) TNS3 (ENSKMAG00000014376) DSP (ENSKMAG00000014314) DSP (ENSKMAG00000014265) SLC22A23 (ENSKMAG00000014165) #20 ENSKMAG00000014113 #22 ENSKMAG00000014082 DSC1 (ENSKMAG00000014058) CDH2 (ENSKMAG00000013992) AQP4 (ENSKMAG00000013938) KCTD1 (ENSKMAG00000013894) psma8 (ENSKMAG00000013841) ss18 (ENSKMAG00000013752) ZNF521 (ENSKMAG00000013661) ENSKMAG00000013538 OSBPL1A (ENSKMAG00000013357) TTC39C (ENSKMAG00000013303) ENSKMAG00000013242 ENSKMAG00000013192 vps4b (ENSKMAG00000013121) kdsr (ENSKMAG00000013061) Ovalentaria_B ANCESTRAL SPECIES 6 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000167019 ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a Pomacentridae ANCESTRAL SPECIES 6 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000167019 ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a.g ENSGT00940000155638.wb.a.h ENSGT00940000154973.b Bicolor damselfish MODERN SPECIES 1737 igfbp1b (ENSSPAG00000006670) IGFBP3 (ENSSPAG00000006646) TNS3 (ENSSPAG00000006595) DSP (ENSSPAG00000006562) SLC22A23 (ENSSPAG00000006534) #20 tubb2 (ENSSPAG00000006137) #22 ENSSPAG00000006095 dsc2l (ENSSPAG00000005885) Pomacentridae_A ANCESTRAL SPECIES 5 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b.g ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000179839 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a.g ENSGT00940000154973.b ENSGT00940000155638.wb.a.h Spiny chromis MODERN SPECIES 1608 ENSAPOG00000022469 IGFBP1 (ENSAPOG00000022479) IGFBP3 (ENSAPOG00000022489) TNS3 (ENSAPOG00000022516) DSP (ENSAPOG00000022553) slc22a23 (ENSAPOG00000022623) #20 tubb2 (ENSAPOG00000022652) #22 Amphiprion ANCESTRAL SPECIES 35 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b.g ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000179839 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a.g ENSGT00940000155638.wb.a.h ENSGT00940000154973.a.a Clown anemonefish MODERN SPECIES 873 dusp22b (ENSAOCG00000017936) ripk1l (ENSAOCG00000001266) #25 opn7a (ENSAOCG00000018016) MEP1B (ENSAOCG00000018043) PHLPP1 (ENSAOCG00000018132) ENSAOCG00000018170 ENSAOCG00000018185 ENSAOCG00000018189 SIRT5 (ENSAOCG00000018198) adcy1b (ENSAOCG00000018269) igfbp1b (ENSAOCG00000018285) IGFBP3 (ENSAOCG00000018293) TNS3 (ENSAOCG00000018309) DSP (ENSAOCG00000018330) slc22a23 (ENSAOCG00000001312) #20 tubb2 (ENSAOCG00000002022) #22 Orange clownfish MODERN SPECIES 1 dusp22b (ENSAPEG00000004637) ripk1l (ENSAPEG00000004703) #25 opn7a (ENSAPEG00000004717) MEP1B (ENSAPEG00000004783) PHLPP1 (ENSAPEG00000004948) PHACTR1 (ENSAPEG00000005017) ENSAPEG00000005077 SIRT5 (ENSAPEG00000005104) adcy1b (ENSAPEG00000005123) IGFBP1 (ENSAPEG00000005229) IGFBP3 (ENSAPEG00000005245) ENSAPEG00000005304 ENSAPEG00000005353 DSP (ENSAPEG00000005404) SLC22A23 (ENSAPEG00000005434) #20 tubb2 (ENSAPEG00000005474) #22 ENSAPEG00000005493 dsc2l (ENSAPEG00000005505) CDH2 (ENSAPEG00000005586) AQP4 (ENSAPEG00000005665) KCTD1 (ENSAPEG00000005714) psma8 (ENSAPEG00000005737) ss18 (ENSAPEG00000005771) ZNF521 (ENSAPEG00000005881) ENSAPEG00000005920 ENSAPEG00000005950 OSBPL1A (ENSAPEG00000005982) TTC39C (ENSAPEG00000006058) ENSAPEG00000006127 ENSAPEG00000006176 vps4b (ENSAPEG00000006226) Cichlidae ANCESTRAL SPECIES 2 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Midas cichlid MODERN SPECIES 641 foxq1a (ENSACIG00000017470) irf4a (ENSACIG00000017452) dusp22b (ENSACIG00000017434) ripk1l (ENSACIG00000017396) #25 opn7a (ENSACIG00000017356) MEP1B (ENSACIG00000017305) PHLPP1 (ENSACIG00000017274) PHACTR1 (ENSACIG00000017248) SIRT5 (ENSACIG00000017231) adcy1b (ENSACIG00000017194) igfbp1b (ENSACIG00000017060) IGFBP3 (ENSACIG00000017002) TNS3 (ENSACIG00000016907) DSP (ENSACIG00000016672) SLC22A23 (ENSACIG00000016579) #20 tubb2 (ENSACIG00000016390) #22 ENSACIG00000016342 dsc2l (ENSACIG00000016234) CDH2 (ENSACIG00000016202) AQP4 (ENSACIG00000016092) KCTD1 (ENSACIG00000016065) psma8 (ENSACIG00000016049) ss18 (ENSACIG00000016031) ZNF521 (ENSACIG00000016013) ENSACIG00000015985 OSBPL1A (ENSACIG00000015935) TTC39C (ENSACIG00000015911) ENSACIG00000015898 ENSACIG00000015857 ENSACIG00000015823 vps4b (ENSACIG00000015790) Pseudocrenilabrinae ANCESTRAL SPECIES 7 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Nile tilapia MODERN SPECIES 9 dusp22b (ENSONIG00000009639) ripk1l (ENSONIG00000009641) #25 opn7a (ENSONIG00000009642) MEP1B (ENSONIG00000009643) PHLPP1 (ENSONIG00000009647) ENSONIG00000035845 ENSONIG00000040123 ENSONIG00000030477 SIRT5 (ENSONIG00000009653) adcy1b (ENSONIG00000009657) IGFBP1 (ENSONIG00000009667) IGFBP3 (ENSONIG00000009669) TNS3 (ENSONIG00000009674) DSP (ENSONIG00000009681) slc22a23 (ENSONIG00000009683) #20 tubb2 (ENSONIG00000009687) #22 ENSONIG00000009689 DSC1 (ENSONIG00000009697) CDH2 (ENSONIG00000009709) AQP4 (ENSONIG00000009731) KCTD1 (ENSONIG00000032280) ss18 (ENSONIG00000009737) psma8 (ENSONIG00000009734) ZNF521 (ENSONIG00000009740) hrh3 (ENSONIG00000031115) OSBPL1A (ENSONIG00000009743) TTC39C (ENSONIG00000009745) LAMA3 (ENSONIG00000009751) vps4b (ENSONIG00000009758) kdsr (ENSONIG00000009764) ENSONIG00000028347 Pseudocrenilabrinae_A ANCESTRAL SPECIES 4 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Haplochromini ANCESTRAL SPECIES 2 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Haplochromini_A ANCESTRAL SPECIES 3 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Haplochromini_B ANCESTRAL SPECIES 12 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000167019 ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a Zebra mbuna MODERN SPECIES 1100 foxq1a (ENSMZEG00005025109) irf4a (ENSMZEG00005025111) dusp22b (ENSMZEG00005025117) ripk1l (ENSMZEG00005025120) #25 opn7a (ENSMZEG00005025126) MEP1B (ENSMZEG00005025139) PHLPP1 (ENSMZEG00005025144) PHACTR1 (ENSMZEG00005025149) SIRT5 (ENSMZEG00005025150) adcy1b (ENSMZEG00005025153) igfbp1b (ENSMZEG00005025156) IGFBP3 (ENSMZEG00005025157) TNS3 (ENSMZEG00005025159) DSP (ENSMZEG00005025162) slc22a23 (ENSMZEG00005025166) #20 tubb2 (ENSMZEG00005025168) #22 ENSMZEG00005025358 dsc2l (ENSMZEG00005025360) CDH2 (ENSMZEG00005025365) AQP4 (ENSMZEG00005025370) KCTD1 (ENSMZEG00005025372) psma8 (ENSMZEG00005025374) ss18 (ENSMZEG00005025376) ZNF521 (ENSMZEG00005025380) ENSMZEG00005025383 ENSMZEG00005025384 ENSMZEG00005025385 ENSMZEG00005025389 OSBPL1A (ENSMZEG00005025393) TTC39C (ENSMZEG00005025399) ENSMZEG00005025400 Eastern happy MODERN SPECIES 9 foxq1a (ENSACLG00000020510) irf4a (ENSACLG00000020537) dusp22b (ENSACLG00000020544) ripk1l (ENSACLG00000020558) #25 opn7a (ENSACLG00000020612) MEP1B (ENSACLG00000020775) PHLPP1 (ENSACLG00000020816) PHACTR1 (ENSACLG00000020914) SIRT5 (ENSACLG00000020953) adcy1b (ENSACLG00000020993) igfbp1b (ENSACLG00000021105) IGFBP3 (ENSACLG00000021124) TNS3 (ENSACLG00000021153) DSP (ENSACLG00000021205) slc22a23 (ENSACLG00000021330) #20 tubb2 (ENSACLG00000021381) #22 ENSACLG00000021621 dsc2l (ENSACLG00000021646) CDH2 (ENSACLG00000021735) AQP4 (ENSACLG00000021796) KCTD1 (ENSACLG00000021856) psma8 (ENSACLG00000021904) ss18 (ENSACLG00000021934) ZNF521 (ENSACLG00000022025) ENSACLG00000022064 OSBPL1A (ENSACLG00000022080) TTC39C (ENSACLG00000022180) ENSACLG00000022281 ENSACLG00000022335 vps4b (ENSACLG00000022372) kdsr (ENSACLG00000022436) P. nyererei MODERN SPECIES 299 foxq1a (ENSPNYG00000014087) irf4a (ENSPNYG00000014073) dusp22b (ENSPNYG00000014062) ripk1l (ENSPNYG00000014044) #25 opn7a (ENSPNYG00000013959) MEP1B (ENSPNYG00000013848) PHLPP1 (ENSPNYG00000013774) PHACTR1 (ENSPNYG00000013733) SIRT5 (ENSPNYG00000013717) adcy1b (ENSPNYG00000013673) igfbp1b (ENSPNYG00000013647) IGFBP3 (ENSPNYG00000013633) TNS3 (ENSPNYG00000013611) DSP (ENSPNYG00000013581) SLC22A23 (ENSPNYG00000013540) #20 tubb2 (ENSPNYG00000013382) #22 ENSPNYG00000013338 dsc2l (ENSPNYG00000013238) CDH2 (ENSPNYG00000013184) AQP4 (ENSPNYG00000013097) KCTD1 (ENSPNYG00000013059) psma8 (ENSPNYG00000013038) ss18 (ENSPNYG00000012992) ZNF521 (ENSPNYG00000012950) ENSPNYG00000012926 OSBPL1A (ENSPNYG00000012641) TTC39C (ENSPNYG00000012599) ENSPNYG00000012519 ENSPNYG00000012468 ENSPNYG00000012445 vps4b (ENSPNYG00000012425) Burton s mouthbrooder MODERN SPECIES 271 foxq1a (ENSHBUG00000000876) irf4a (ENSHBUG00000005913) dusp22b (ENSHBUG00000005862) ripk1l (ENSHBUG00000005852) #25 opn7a (ENSHBUG00000005826) MEP1B (ENSHBUG00000005743) PHLPP1 (ENSHBUG00000005725) PHACTR1 (ENSHBUG00000005703) SIRT5 (ENSHBUG00000005638) adcy1b (ENSHBUG00000005622) igfbp1b (ENSHBUG00000005525) IGFBP3 (ENSHBUG00000000729) ENSHBUG00000005521 DSP (ENSHBUG00000005465) slc22a23 (ENSHBUG00000005374) #20 tubb2 (ENSHBUG00000000132) #22 ENSHBUG00000005033 dsc2l (ENSHBUG00000005015) CDH2 (ENSHBUG00000004968) AQP4 (ENSHBUG00000004927) KCTD1 (ENSHBUG00000004918) psma8 (ENSHBUG00000004895) ss18 (ENSHBUG00000004841) ZNF521 (ENSHBUG00000004805) ENSHBUG00000004759 OSBPL1A (ENSHBUG00000004747) TTC39C (ENSHBUG00000004690) ENSHBUG00000004613 ENSHBUG00000004508 ENSHBUG00000000850 vps4b (ENSHBUG00000004463) Lyretail cichlid MODERN SPECIES 300 foxq1a (ENSNBRG00000012688) irf4a (ENSNBRG00000012710) dusp22b (ENSNBRG00000012885) ripk1l (ENSNBRG00000012956) #25 opn7a (ENSNBRG00000013050) MEP1B (ENSNBRG00000013141) PHLPP1 (ENSNBRG00000013249) PHACTR1 (ENSNBRG00000013293) SIRT5 (ENSNBRG00000013327) adcy1b (ENSNBRG00000013359) igfbp1b (ENSNBRG00000013401) IGFBP3 (ENSNBRG00000013393) TNS3 (ENSNBRG00000013410) DSP (ENSNBRG00000013461) slc22a23 (ENSNBRG00000013476) #20 ENSNBRG00000013503 #22 ENSNBRG00000013524 dsc2l (ENSNBRG00000013611) CDH2 (ENSNBRG00000013653) AQP4 (ENSNBRG00000013687) KCTD1 (ENSNBRG00000013706) psma8 (ENSNBRG00000013730) ss18 (ENSNBRG00000013754) ZNF521 (ENSNBRG00000013822) ENSNBRG00000013868 OSBPL1A (ENSNBRG00000013905) TTC39C (ENSNBRG00000014109) ENSNBRG00000014153 ENSNBRG00000014217 ENSNBRG00000014238 vps4b (ENSNBRG00000014255) Percomorphaceae_C ANCESTRAL SPECIES 6 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Percomorphaceae_D ANCESTRAL SPECIES 6 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Carangaria ANCESTRAL SPECIES 5 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Pleuronectoidei ANCESTRAL SPECIES 1 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Turbot MODERN SPECIES 19 foxq1a (ENSSMAG00000020104) irf4a (ENSSMAG00000020109) dusp22b (ENSSMAG00000020141) ripk1l (ENSSMAG00000020150) #25 ENSSMAG00000020169 ENSSMAG00000020172 ENSSMAG00000020187 ENSSMAG00000020205 ENSSMAG00000020222 adcy1b (ENSSMAG00000020231) IGFBP1 (ENSSMAG00000020271) IGFBP3 (ENSSMAG00000020265) TNS3 (ENSSMAG00000020276) ENSSMAG00000020294 ENSSMAG00000020314 #20 tubb2 (ENSSMAG00000020319) #22 ENSSMAG00000020322 DSC1 (ENSSMAG00000020331) CDH2 (ENSSMAG00000020336) AQP4 (ENSSMAG00000020351) KCTD1 (ENSSMAG00000020364) PSMA8 (ENSSMAG00000020374) SS18 (ENSSMAG00000020375) ZNF521 (ENSSMAG00000020393) ENSSMAG00000020412 OSBPL1A (ENSSMAG00000020415) TTC39C (ENSSMAG00000020421) LAMA3 (ENSSMAG00000020427) vps4b (ENSSMAG00000020443) kdsr (ENSSMAG00000020454) ENSSMAG00000020475 Carangaria_A ANCESTRAL SPECIES 2 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Barramundi perch MODERN SPECIES 69 irf4a (ENSLCAG00010009618) dusp22b (ENSLCAG00010009634) ripk1l (ENSLCAG00010009640) #25 opn7a (ENSLCAG00010009644) MEP1B (ENSLCAG00010009658) PHLPP1 (ENSLCAG00010009705) PHACTR1 (ENSLCAG00010009788) ENSLCAG00010009797 ENSLCAG00010009802 adcy1b (ENSLCAG00010009831) igfbp1b (ENSLCAG00010009927) IGFBP3 (ENSLCAG00010009929) TNS3 (ENSLCAG00010009939) DSP (ENSLCAG00010010041) SLC22A23 (ENSLCAG00010010384) #20 tubb2 (ENSLCAG00010010387) #22 ENSLCAG00010010407 dsc2l (ENSLCAG00010010416) CDH2 (ENSLCAG00010010423) AQP4 (ENSLCAG00010010432) KCTD1 (ENSLCAG00010010437) psma8 (ENSLCAG00010010442) ss18 (ENSLCAG00010010463) ZNF521 (ENSLCAG00010010472) ENSLCAG00010010479 OSBPL1A (ENSLCAG00010010485) TTC39C (ENSLCAG00010010512) LAMA3 (ENSLCAG00010010572) vps4b (ENSLCAG00010010804) kdsr (ENSLCAG00010010821) BCL2 (ENSLCAG00010010850) Seriola ANCESTRAL SPECIES ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000180519 ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000167019 ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 Yellowtail amberjack MODERN SPECIES 3151 opn7a (ENSSLDG00000018385) MEP1B (ENSSLDG00000018458) PHLPP1 (ENSSLDG00000018484) ENSSLDG00000018532 ENSSLDG00000018549 ENSSLDG00000018564 ENSSLDG00000018570 SIRT5 (ENSSLDG00000018587) adcy1b (ENSSLDG00000018607) ENSSLDG00000018655 igfbp1b (ENSSLDG00000018680) IGFBP3 (ENSSLDG00000018666) TNS3 (ENSSLDG00000018690) DSP (ENSSLDG00000018724) SLC22A23 (ENSSLDG00000018764) #20 tubb2 (ENSSLDG00000018797) #22 ENSSLDG00000018816 dsc2l (ENSSLDG00000018841) CDH2 (ENSSLDG00000018869) AQP4 (ENSSLDG00000018897) KCTD1 (ENSSLDG00000018914) psma8 (ENSSLDG00000018934) ss18 (ENSSLDG00000018962) ZNF521 (ENSSLDG00000019016) ENSSLDG00000019063 ENSSLDG00000019071 OSBPL1A (ENSSLDG00000019088) TTC39C (ENSSLDG00000019116) ENSSLDG00000019140 LAMA3 (ENSSLDG00000019192) vps4b (ENSSLDG00000019487) Greater amberjack MODERN SPECIES 99 dusp22b (ENSSDUG00000020054) ripk1l (ENSSDUG00000020067) #25 opn7a (ENSSDUG00000020100) MEP1B (ENSSDUG00000020161) PHLPP1 (ENSSDUG00000020186) PHACTR1 (ENSSDUG00000020251) ENSSDUG00000020274 SIRT5 (ENSSDUG00000020289) adcy1b (ENSSDUG00000020308) ENSSDUG00000020347 IGFBP1 (ENSSDUG00000020363) IGFBP3 (ENSSDUG00000020472) TNS3 (ENSSDUG00000020485) DSP (ENSSDUG00000020531) slc22a23 (ENSSDUG00000020659) #20 tubb2 (ENSSDUG00000020682) #22 ENSSDUG00000020725 dsc2l (ENSSDUG00000020748) CDH2 (ENSSDUG00000020770) AQP4 (ENSSDUG00000020808) KCTD1 (ENSSDUG00000020834) psma8 (ENSSDUG00000020844) ss18 (ENSSDUG00000020873) ZNF521 (ENSSDUG00000020931) Anabantaria ANCESTRAL SPECIES 8 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT00950000183019.f.a.c.b Zig-zag eel MODERN SPECIES 8 foxq1a (ENSMAMG00000014500) irf4a (ENSMAMG00000014470) dusp22b (ENSMAMG00000014461) ripk1l (ENSMAMG00000014429) #25 ENSMAMG00000014416 ENSMAMG00000014322 ENSMAMG00000014289 ENSMAMG00000014247 adcy1b (ENSMAMG00000014197) ENSMAMG00000014185 igfbp1b (ENSMAMG00000014172) IGFBP3 (ENSMAMG00000014131) TNS3 (ENSMAMG00000014107) ENSMAMG00000014080 ENSMAMG00000014036 #20 tubb2 (ENSMAMG00000026660) #22 ENSMAMG00000013907 DSC1 (ENSMAMG00000013873) CDH2 (ENSMAMG00000013818) AQP4 (ENSMAMG00000013796) KCTD1 (ENSMAMG00000013768) PSMA8 (ENSMAMG00000013734) SS18 (ENSMAMG00000013697) ZNF521 (ENSMAMG00000013641) ENSMAMG00000013614 OSBPL1A (ENSMAMG00000013505) TTC39C (ENSMAMG00000013441) LAMA3 (ENSMAMG00000013323) vps4b (ENSMAMG00000013215) kdsr (ENSMAMG00000013168) ENSMAMG00000013096 Anabantoidei ANCESTRAL SPECIES 18 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT00950000183019.f.a.c.b Climbing perch MODERN SPECIES 8 foxq1a (ENSATEG00000008360) irf4a (ENSATEG00000008375) dusp22b (ENSATEG00000008418) ripk1l (ENSATEG00000008438) #25 ENSATEG00000008461 ENSATEG00000008553 ENSATEG00000008694 ENSATEG00000008715 ENSATEG00000008773 adcy1b (ENSATEG00000008822) igfbp1b (ENSATEG00000008951) IGFBP3 (ENSATEG00000009283) TNS3 (ENSATEG00000009291) ENSATEG00000009310 ENSATEG00000026617 #20 tubb2 (ENSATEG00000023934) #22 ENSATEG00000009363 DSC1 (ENSATEG00000009379) CDH2 (ENSATEG00000009412) AQP4 (ENSATEG00000009503) KCTD1 (ENSATEG00000009640) PSMA8 (ENSATEG00000009669) SS18 (ENSATEG00000009718) ZNF521 (ENSATEG00000009781) ENSATEG00000027816 ENSATEG00000027987 ENSATEG00000026507 ENSATEG00000010100 ENSATEG00000026843 OSBPL1A (ENSATEG00000010119) TTC39C (ENSATEG00000010184) Siamese fighting fish MODERN SPECIES 8 foxq1a (ENSBSLG00000006577) irf4a (ENSBSLG00000006486) dusp22b (ENSBSLG00000006429) ripk1l (ENSBSLG00000006395) #25 opn7a (ENSBSLG00000006333) MEP1B (ENSBSLG00000005999) PHLPP1 (ENSBSLG00000005913) PHACTR1 (ENSBSLG00000005845) SIRT5 (ENSBSLG00000005825) adcy1b (ENSBSLG00000005015) igfbp1b (ENSBSLG00000026250) IGFBP3 (ENSBSLG00000026225) TNS3 (ENSBSLG00000026183) DSP (ENSBSLG00000026042) slc22a23 (ENSBSLG00000025972) #20 tubb2 (ENSBSLG00000025961) #22 ENSBSLG00000025887 dsc2l (ENSBSLG00000025886) CDH2 (ENSBSLG00000025824) ENSBSLG00000025762 KCTD1 (ENSBSLG00000025755) psma8 (ENSBSLG00000025729) ss18 (ENSBSLG00000025636) ZNF521 (ENSBSLG00000025611) ENSBSLG00000025604 ENSBSLG00000025587 TTC39C (ENSBSLG00000025425) vps4b (ENSBSLG00000024890) kdsr (ENSBSLG00000024806) PRKAG2 (ENSBSLG00000024494) ENSBSLG00000024439 Eupercaria ANCESTRAL SPECIES 24 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Tetraodontidae ANCESTRAL SPECIES 30 ENSGT00940000162937.a.b ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Fugu MODERN SPECIES 14 irf4a (ENSTRUG00000021189) dusp22b (ENSTRUG00000024159) ripk1l (ENSTRUG00000011793) #25 opn7a (ENSTRUG00000011946) MEP1B (ENSTRUG00000011996) PHLPP1 (ENSTRUG00000012154) ENSTRUG00000024462 PHACTR1 (ENSTRUG00000012375) SIRT5 (ENSTRUG00000012455) adcy1b (ENSTRUG00000012530) igfbp1b (ENSTRUG00000013034) IGFBP3 (ENSTRUG00000013099) TNS3 (ENSTRUG00000026106) slc22a23 (ENSTRUG00000031254) #20 SLC22A23 (ENSTRUG00000030886) #20 tubb2 (ENSTRUG00000030757) #22 ENSTRUG00000005736 DSC1 (ENSTRUG00000007388) CDH2 (ENSTRUG00000008035) ENSTRUG00000029330 AQP4 (ENSTRUG00000032168) KCTD1 (ENSTRUG00000027125) psma8 (ENSTRUG00000008786) ss18 (ENSTRUG00000008991) ZNF521 (ENSTRUG00000003333) ENSTRUG00000031063 OSBPL1A (ENSTRUG00000002151) TTC39C (ENSTRUG00000002949) LAMA3 (ENSTRUG00000031253) vps4b (ENSTRUG00000004439) kdsr (ENSTRUG00000005033) Tetraodon MODERN SPECIES 6 ENSTNIG00000005873 ENSTNIG00000005874 ENSTNIG00000005875 syt5b (ENSTNIG00000001694) dnaaf3 (ENSTNIG00000015186) TNNT1 (ENSTNIG00000015187) ENSTNIG00000015188 ENSTNIG00000015189 PRR12 (ENSTNIG00000015190) irf3 (ENSTNIG00000015191) ENSTNIG00000015192 trpm4b.2 (ENSTNIG00000015193) ENSTNIG00000015194 DSP (ENSTNIG00000015195) slc22a23 (ENSTNIG00000015196) #20 tubb2 (ENSTNIG00000015197) #22 ENSTNIG00000015198 ENSTNIG00000015199 ENSTNIG00000015200 zgc:92313 (ENSTNIG00000015201) mapk7 (ENSTNIG00000015202) vkorc1 (ENSTNIG00000015203) ENSTNIG00000001073 ENSTNIG00000015204 mep1ba (ENSTNIG00000015205) ENSTNIG00000015206 vkorc1 (ENSTNIG00000006213) aldoaa (ENSTNIG00000015207) ENSTNIG00000015208 ENSTNIG00000015209 eif3c (ENSTNIG00000015210) Eupecaria_A ANCESTRAL SPECIES 8 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.b ENSGT00940000154973.a.a ENSGT00940000156961 Ballan wrasse MODERN SPECIES 4 opn7a (ENSLBEG00000017091) MEP1B (ENSLBEG00000017151) PHLPP1 (ENSLBEG00000017227) PHACTR1 (ENSLBEG00000017318) ENSLBEG00000017362 ENSLBEG00000017385 ENSLBEG00000017407 ENSLBEG00000017424 SIRT5 (ENSLBEG00000017445) adcy1b (ENSLBEG00000017481) igfbp1b (ENSLBEG00000017546) IGFBP3 (ENSLBEG00000017562) TNS3 (ENSLBEG00000017592) DSP (ENSLBEG00000017750) slc22a23 (ENSLBEG00000017989) #20 tubb2 (ENSLBEG00000018010) #22 ENSLBEG00000018058 dsc2l (ENSLBEG00000018158) CDH2 (ENSLBEG00000018251) AQP4 (ENSLBEG00000018294) KCTD1 (ENSLBEG00000018323) psma8 (ENSLBEG00000018353) ss18 (ENSLBEG00000018416) ZNF521 (ENSLBEG00000018510) ENSLBEG00000018555 ENSLBEG00000018573 OSBPL1A (ENSLBEG00000018612) TTC39C (ENSLBEG00000018652) ENSLBEG00000018733 ENSLBEG00000018891 vps4b (ENSLBEG00000018938) Eupecaria_B ANCESTRAL SPECIES 8 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Eupecaria_C ANCESTRAL SPECIES 10 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT00950000183019.f.a.c.b Gilthead seabream MODERN SPECIES 13 ripk1l (ENSSAUG00010023359) #25 opn7a (ENSSAUG00010023361) MEP1B (ENSSAUG00010023365) PHLPP1 (ENSSAUG00010023394) ENSSAUG00010023396 ENSSAUG00010023408 ENSSAUG00010023409 SIRT5 (ENSSAUG00010023410) adcy1b (ENSSAUG00010023411) IGFBP1 (ENSSAUG00010023441) ENSSAUG00010023442 IGFBP3 (ENSSAUG00010023443) TNS3 (ENSSAUG00010023453) DSP (ENSSAUG00010023788) SLC22A23 (ENSSAUG00010023798) #20 tubb2 (ENSSAUG00010023813) #22 ENSSAUG00010023815 dsc2l (ENSSAUG00010023817) CDH2 (ENSSAUG00010023834) AQP4 (ENSSAUG00010025731) KCTD1 (ENSSAUG00010025732) psma8 (ENSSAUG00010025737) ss18 (ENSSAUG00010025742) ENSSAUG00010025744 ZNF521 (ENSSAUG00010025747) ENSSAUG00010025750 OSBPL1A (ENSSAUG00010025769) TTC39C (ENSSAUG00010026433) LAMA3 (ENSSAUG00010026450) vps4b (ENSSAUG00010026478) kdsr (ENSSAUG00010026533) Eupercaria_incertae_sedis ANCESTRAL SPECIES 8 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT00950000183019.f.a.c.b Large yellow croaker MODERN SPECIES 1 irf4a (ENSLCRG00005015973) dusp22b (ENSLCRG00005015974) ripk1l (ENSLCRG00005015975) #25 opn7a (ENSLCRG00005015977) MEP1B (ENSLCRG00005015978) PHLPP1 (ENSLCRG00005015982) PHACTR1 (ENSLCRG00005016360) ENSLCRG00005016401 SIRT5 (ENSLCRG00005016402) adcy1b (ENSLCRG00005016410) IGFBP1 (ENSLCRG00005016477) IGFBP3 (ENSLCRG00005016479) TNS3 (ENSLCRG00005016488) DSP (ENSLCRG00005016560) SLC22A23 (ENSLCRG00005017072) #20 tubb2 (ENSLCRG00005017073) #22 ENSLCRG00005017081 dsc2l (ENSLCRG00005017086) ENSLCRG00005017091 CDH2 (ENSLCRG00005017109) AQP4 (ENSLCRG00005019553) ENSLCRG00005019555 psma8 (ENSLCRG00005019556) ss18 (ENSLCRG00005019572) ENSLCRG00005019616 ZNF521 (ENSLCRG00005019617) ENSLCRG00005019622 OSBPL1A (ENSLCRG00005019637) TTC39C (ENSLCRG00005019961) LAMA3 (ENSLCRG00005020019) vps4b (ENSLCRG00005020088) European seabass MODERN SPECIES irf4a (ENSDLAG00005021983) dusp22b (ENSDLAG00005021976) ripk1l (ENSDLAG00005021971) #25 ENSDLAG00005021964 ENSDLAG00005021947 ENSDLAG00005021592 ENSDLAG00005021571 ENSDLAG00005021514 ENSDLAG00005021506 ADCY1 (ENSDLAG00005021214) IGFBP1 (ENSDLAG00005021204) IGFBP3 (ENSDLAG00005021201) TNS3 (ENSDLAG00005021110) ENSDLAG00005020378 ENSDLAG00005020341 #20 tubb2 (ENSDLAG00005020323) #22 ENSDLAG00005020314 DSC1 (ENSDLAG00005020295) CDH2 (ENSDLAG00005016326) AQP4 (ENSDLAG00005016143) KCTD1 (ENSDLAG00005016121) PSMA8 (ENSDLAG00005017693) SS18 (ENSDLAG00005016072) ZNF521 (ENSDLAG00005016043) ENSDLAG00005015974 OSBPL1A (ENSDLAG00005012507) TTC39C (ENSDLAG00005012161) LAMA3 (ENSDLAG00005010185) vps4b (ENSDLAG00005009823) kdsr (ENSDLAG00005009694) ENSDLAG00005009158 Perciformes ANCESTRAL SPECIES 5 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Perciformes_a ANCESTRAL SPECIES 17 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT01100000263533.b.a.a.b ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT00950000183019.f.a.c.b Pike perch MODERN SPECIES 12 irf4a (ENSSLUG00000003880) dusp22b (ENSSLUG00000003886) ripk1l (ENSSLUG00000003896) #25 opn7a (ENSSLUG00000003911) MEP1B (ENSSLUG00000003945) PHLPP1 (ENSSLUG00000003968) PHACTR1 (ENSSLUG00000004007) ENSSLUG00000004052 SIRT5 (ENSSLUG00000004063) adcy1b (ENSSLUG00000004140) igfbp1b (ENSSLUG00000004848) IGFBP3 (ENSSLUG00000004852) TNS3 (ENSSLUG00000004891) DSP (ENSSLUG00000005224) slc22a23 (ENSSLUG00000007392) #20 tubb2 (ENSSLUG00000007414) #22 ENSSLUG00000007478 dsc2l (ENSSLUG00000007507) CDH2 (ENSSLUG00000007866) AQP4 (ENSSLUG00000013995) KCTD1 (ENSSLUG00000014003) psma8 (ENSSLUG00000014022) ss18 (ENSSLUG00000014054) ZNF521 (ENSSLUG00000014084) ENSSLUG00000014099 OSBPL1A (ENSSLUG00000014272) TTC39C (ENSSLUG00000017213) LAMA3 (ENSSLUG00000017309) vps4b (ENSSLUG00000017490) kdsr (ENSSLUG00000018000) PRKAG2 (ENSSLUG00000018073) Channel bull blenny MODERN SPECIES 8 irf4a (ENSCGOG00000022552) dusp22b (ENSCGOG00000022575) ripk1l (ENSCGOG00000022577) #25 opn7a (ENSCGOG00000022580) MEP1B (ENSCGOG00000022584) PHLPP1 (ENSCGOG00000022589) PHACTR1 (ENSCGOG00000022699) ENSCGOG00000022702 SIRT5 (ENSCGOG00000022704) adcy1b (ENSCGOG00000022721) IGFBP1 (ENSCGOG00000022730) IGFBP3 (ENSCGOG00000022740) TNS3 (ENSCGOG00000022788) DSP (ENSCGOG00000023011) slc22a23 (ENSCGOG00000023243) #20 tubb2 (ENSCGOG00000023246) #22 ENSCGOG00000023261 dsc2l (ENSCGOG00000023275) CDH2 (ENSCGOG00000023360) AQP4 (ENSCGOG00000023794) KCTD1 (ENSCGOG00000023795) psma8 (ENSCGOG00000023801) ss18 (ENSCGOG00000023838) ZNF521 (ENSCGOG00000023847) ENSCGOG00000023851 OSBPL1A (ENSCGOG00000023855) TTC39C (ENSCGOG00000023866) ENSCGOG00000023886 ENSCGOG00000001709 vps4b (ENSCGOG00000001734) kdsr (ENSCGOG00000001794) Cottioidei ANCESTRAL SPECIES 15 ENSGT00940000175414 ENSGT00940000155526.i.b ENSGT00390000008686.d.a ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT01030000234624.b.b.c.b ENSGT01030000234624.a ENSGT00940000155981.g ENSGT00940000156037.a.f.f ENSGT00940000156453.a ENSGT00940000160354 ENSGT00940000156352 ENSGT00940000159287 ENSGT00940000163206.b.a.b ENSGT00940000155295.z ENSGT00950000182917.b.a.a ENSGT00940000155638.wb.a ENSGT00940000154973.a.a ENSGT00940000156961 ENSGT01090000260003.a.b.b.a.a.b.a.b.b Lumpfish MODERN SPECIES 8 GAD1 (ENSCLMG00005001502) GORASP2 (ENSCLMG00005001542) ripk1l (ENSCLMG00005001554) #25 opn7a (ENSCLMG00005001594) MEP1B (ENSCLMG00005001681) PHLPP1 (ENSCLMG00005001737) ENSCLMG00005001750 ENSCLMG00005001752 SIRT5 (ENSCLMG00005001754) adcy1b (ENSCLMG00005001762) igfbp1b (ENSCLMG00005001769) IGFBP3 (ENSCLMG00005001832) TNS3 (ENSCLMG00005002024) DSP (ENSCLMG00005002130) SLC22A23 (ENSCLMG00005002742) #20 tubb2 (ENSCLMG00005002743) #22 ENSCLMG00005002751 dsc2l (ENSCLMG00005002754) CDH2 (ENSCLMG00005002755) AQP4 (ENSCLMG00005002757) KCTD1 (ENSCLMG00005002758) psma8 (ENSCLMG00005002759) ss18 (ENSCLMG00005003096) ZNF521 (ENSCLMG00005003102) ENSCLMG00005003106 ENSCLMG00005003107 OSBPL1A (ENSCLMG00005003132) TTC39C (ENSCLMG00005003532) ENSCLMG00005004034 ENSCLMG00005004036 vps4b (ENSCLMG00005004043) Stickleback MODERN SPECIES 2 SLC25A30 (ENSGACG00000012919) gad1b (ENSGACG00000012944) gorasp2 (ENSGACG00000012972) ripk1l (ENSGACG00000012991) #25 opn7a (ENSGACG00000012996) MEP1B (ENSGACG00000012999) PHLPP1 (ENSGACG00000013009) PHACTR1 (ENSGACG00000013017) SIRT5 (ENSGACG00000013024) adcy1b (ENSGACG00000013069) igfbp1b (ENSGACG00000013082) IGFBP3 (ENSGACG00000013090) TNS3 (ENSGACG00000013093) DSP (ENSGACG00000013099) slc22a23 (ENSGACG00000013105) #20 tubb2 (ENSGACG00000013114) #22 ENSGACG00000013161 dsc2l (ENSGACG00000013163) CDH2 (ENSGACG00000013168) AQP4 (ENSGACG00000013183) KCTD1 (ENSGACG00000013193) psma8 (ENSGACG00000013222) ss18 (ENSGACG00000013236) ZNF521 (ENSGACG00000013251) ENSGACG00000013253 OSBPL1A (ENSGACG00000013256) TTC39C (ENSGACG00000013290) LAMA3 (ENSGACG00000013300) vps4b (ENSGACG00000013317) kdsr (ENSGACG00000013347) BCL2 (ENSGACG00000013368) Otomorpha ANCESTRAL SPECIES 231 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT00950000182909.b.a.a.cb ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000155842.s ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 ENSGT00530000063497.b ENSGT00940000158038.c.b ENSGT00940000160247 ENSGT00940000160126 ENSGT00940000175752 ENSGT00940000156450.d Clupeiformes ANCESTRAL SPECIES 191 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153.w ENSGT00940000159347 #25 ENSGT01100000263524.B.b.b ENSGT00950000183111.b.a.a ENSGT00940000158137.c.a ENSGT00940000155842.t ENSGT00940000156080.k ENSGT00940000154872.A ENSGT00940000157394.b ENSGT00940000158092.p ENSGT00940000156328.a.a.b ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150 #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 ENSGT00530000063497.b ENSGT00940000170421 ENSGT00730000110988.wb.b.e ENSGT00950000182913.B.e ENSGT00940000158038.c.b ENSGT00940000160247 ENSGT00940000160126 ENSGT00530000063460.A.a ENSGT00940000156450.d Denticle herring MODERN SPECIES 14 apela (ENSDCDG00000020345) ENSDCDG00000020347 ENSDCDG00000020348 tma16 (ENSDCDG00000020350) KLHL2 (ENSDCDG00000020354) msmo1 (ENSDCDG00000020357) cpe (ENSDCDG00000020360) tll1 (ENSDCDG00000020595) SIRT5 (ENSDCDG00000021918) adcy1b (ENSDCDG00000021929) igfbp1b (ENSDCDG00000021949) IGFBP3 (ENSDCDG00000022153) TNS3 (ENSDCDG00000022743) DSP (ENSDCDG00000024080) slc22a23 (ENSDCDG00000026183) #20 tubb2 (ENSDCDG00000026185) #22 ssx2ipa (ENSDCDG00000026191) ENSDCDG00000026202 ENSDCDG00000026214 ENSDCDG00000026215 RNF11 (ENSDCDG00000026217) aurkb (ENSDCDG00000026218) aurkb (ENSDCDG00000026219) TMEM107 (ENSDCDG00000026220) rpe65a (ENSDCDG00000026226) dab1b (ENSDCDG00000026787) c8b (ENSDCDG00000026817) C8A (ENSDCDG00000026826) ENSDCDG00000026827 PLPP3 (ENSDCDG00000026831) ENSDCDG00000026841 Atlantic herring MODERN SPECIES 17 ss18 (ENSCHAG00000026788) PSMA8 (ENSCHAG00000026807) KCTD1 (ENSCHAG00000026830) AQP4 (ENSCHAG00000026833) CDH2 (ENSCHAG00000026938) ENSCHAG00000027533 ENSCHAG00000000637 ENSCHAG00000001004 ENSCHAG00000001264 ENSCHAG00000001294 rpe65a (ENSCHAG00000001421) dab1b (ENSCHAG00000003066) c8b (ENSCHAG00000003222) C8A (ENSCHAG00000003365) ENSCHAG00000003398 #20 ENSCHAG00000003418 #22 DSP (ENSCHAG00000003527) TNS3 (ENSCHAG00000005515) IGFBP3 (ENSCHAG00000006509) igfbp1b (ENSCHAG00000007437) adcy1b (ENSCHAG00000007463) ENSCHAG00000007997 PHACTR1 (ENSCHAG00000008026) PHLPP1 (ENSCHAG00000008085) MEP1B (ENSCHAG00000008256) ENSCHAG00000008341 ripk1l (ENSCHAG00000008506) #25 dusp22b (ENSCHAG00000008514) irf4a (ENSCHAG00000008525) foxq1a (ENSCHAG00000008564) foxf2a (ENSCHAG00000008585) Otophysi DUPLICATION Otophysi DUPLICATION Otophysi ANCESTRAL SPECIES 336 ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150.if #22 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 ENSGT00940000156450.d ENSGT00940000175752 ENSGT00940000160126 ENSGT00940000160247 ENSGT00940000158038.c.b Cyprinoidei ANCESTRAL SPECIES 140 ENSGT01030000234517.A ENSGT00390000009615 ENSGT00390000016232 ENSGT00940000157015.i.b.b ENSGT00940000157015.i.a ENSGT00940000156795 ENSGT01030000234570.d.b.a.b.b.b ENSGT00940000158574.c ENSGT00940000164845 ENSGT00390000000596 ENSGT00940000154276 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 ENSGT00940000163111.a.b ENSGT00940000158038.c.b ENSGT00940000160247 ENSGT00940000160126 ENSGT00940000175752 ENSGT00390000013685 ENSGT00950000182913.B.e ENSGT00940000156352 ENSGT00940000159287.m ENSGT00940000155638.wb.a ENSGT00940000155601.h ENSGT00390000004912.g.a Cyprininae ANCESTRAL SPECIES 66 ENSGT01060000248962 ENSGT00510000047568.a ENSGT01030000234517.A.n ENSGT00390000009615.q ENSGT00390000016232.q ENSGT00940000157015.i.b.b.b ENSGT00940000157015.i.a.j ENSGT00940000156795.e ENSGT01030000234570.d.b.a.b.b.b.i ENSGT00940000158574.c.a ENSGT00940000164845 ENSGT00390000000596.g ENSGT00940000154276 ENSGT00940000154843.F.c.a.b ENSGT00940000157354.j.b #20 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b.a ENSGT00950000183036.a.a.h ENSGT00940000165852.c ENSGT00940000153348.B ENSGT00940000156348.B.m.b ENSGT01030000235262 ENSGT00940000158038.c.b.a ENSGT00940000160247 ENSGT00940000160126 ENSGT00530000063460.A.a.f.b ENSGT00940000175752 ENSGT00390000013685 ENSGT00950000182913.B.e ENSGT00940000158749.r.a ENSGT01030000234624.b.b.c.b.c Cyprininae_a ANCESTRAL SPECIES 98 ENSGT00510000047568.a ENSGT01030000234517.A.n ENSGT00390000009615.q ENSGT00390000016232.q ENSGT00940000157015.i.b.b.b ENSGT00940000157015.i.a.j ENSGT00940000156795.e ENSGT01030000234570.d.b.a.b.b.b.i ENSGT00940000158574.c.a ENSGT00940000164845 ENSGT00390000000596.g ENSGT00390000000596.h ENSGT00940000154276 ENSGT00940000154843.F.c.a.b ENSGT00940000157354.j.b #20 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b.a ENSGT00950000183036.a.a.h ENSGT00940000165852.c ENSGT00940000153348.B.c ENSGT00940000156348.B.m.b ENSGT01030000235262 ENSGT00940000158038.c.b.a ENSGT00940000160247 ENSGT00940000160126 ENSGT00530000063460.A.a.f.b ENSGT00940000175752 ENSGT00390000013685.a ENSGT00950000182913.B.e ENSGT00940000158749.r.a ENSGT01030000234624.b.b.c.b.c Common carp reference MODERN SPECIES 29 ENSCCRG00000010092 rock1 (ENSCCRG00000009200) usp14 (ENSCCRG00000063203) thoc1 (ENSCCRG00000009585) ENSCCRG00000068034 aqp1a.2 (ENSCCRG00000058786) aqp1a.1 (ENSCCRG00000009618) ENSCCRG00000064335 ENSCCRG00000079755 myl13 (ENSCCRG00000042460) pth1r (ENSCCRG00000058326) tmie (ENSCCRG00000078992) ENSCCRG00000079909 ENSCCRG00000004106 slc22a23 (ENSCCRG00000004101) #20 tubb2 (ENSCCRG00000082419) #22 ssx2ipa (ENSCCRG00000000282) ENSCCRG00000055008 ENSCCRG00000058328 exosc4 (ENSCCRG00000063514) ENSCCRG00000020992 ENSCCRG00000008791 ENSCCRG00000072928 ENSCCRG00000082743 prkacbb (ENSCCRG00000021027) dab1b (ENSCCRG00000021428) c8b (ENSCCRG00000021460) C8A (ENSCCRG00000021535) si:ch211-188c16.1 (ENSCCRG00000021545) ENSCCRG00000021578 rpe65a (ENSCCRG00000069901) Zebrafish MODERN SPECIES 11 usp14 (ENSDARG00000025889) thoc1 (ENSDARG00000088246) aqp1a.2 (ENSDARG00000091027) aqp1a.1 (ENSDARG00000023713) ENSDARG00000087421 ENSDARG00000114019 CRHR2 (ENSDARG00000062377) crhr2 (ENSDARG00000103704) myl13 (ENSDARG00000042245) pth1r (ENSDARG00000020957) tmie (ENSDARG00000069423) ENSDARG00000063451 higd1a (ENSDARG00000022303) DSP (ENSDARG00000022309) slc22a23 (ENSDARG00000078856) #20 tubb2 (ENSDARG00000039522) #22 ssx2ipa (ENSDARG00000039521) ENSDARG00000078363 ENSDARG00000077130 exosc4 (ENSDARG00000103432) ADGRL2 (ENSDARG00000075899) ENSDARG00000111712 prkacbb (ENSDARG00000059125) dab1b (ENSDARG00000003290) c8a (ENSDARG00000039516) c8b (ENSDARG00000039517) si:ch211-188c16.1 (ENSDARG00000077288) GPAA1 (ENSDARG00000074571) rpe65a (ENSDARG00000007480) ss18 (ENSDARG00000002970) ZNF521 (ENSDARG00000116769) Characiphysae ANCESTRAL SPECIES 179 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 ENSGT00940000156450.d ENSGT00940000175752 ENSGT00940000160126 ENSGT00940000160247 ENSGT00940000158038.c.b ENSGT00940000153458.A ENSGT00940000160059.a.a ENSGT00940000156321 ENSGT01040000240385.A.b.b.b.a.a.a.d.b.b.b ENSGT00940000164582.a ENSGT01030000234531.B ENSGT00940000180229 Characiphysae_b ANCESTRAL SPECIES 300 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 Characoidei ANCESTRAL SPECIES 478 ENSGT00940000157354.j #20 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b Mexicana tetra MODERN SPECIES 381 slc22a23 (ENSAMXG00000030750) #20 TUBB2A (ENSAMXG00000032445) #22 Red-bellied piranha MODERN SPECIES 1473 ENSPNAG00000022968 #22 ssx2ipa (ENSPNAG00000022953) Otophysi ANCESTRAL SPECIES ENSGT00940000154150.hf.b #22 Cyprinoidei ANCESTRAL SPECIES ENSGT00940000154150.hf.b #22 Cyprininae ANCESTRAL SPECIES ENSGT00940000154150.hf.b #22 Cyprininae_a ANCESTRAL SPECIES 259 ENSGT00940000154843.F.c.a.a ENSGT00940000157354.j.a #20 ENSGT00940000154150.if #22 ENSGT00940000154150.hf.b #22 ENSGT00390000007688.a.b.b ENSGT00940000165852.d ENSGT00940000153348.B.d ENSGT00940000156348.B.m.a ENSGT00940000163111.a.b ENSGT00940000158038.c.b.b ENSGT00530000063460.A.a.f.a ENSGT00390000013685.b ENSGT00940000158749.r.b ENSGT01030000234624.b.b.c.b.d ENSGT00940000156352.h.b ENSGT00940000159287.m.d ENSGT00940000163206.b.a.b.b ENSGT00390000004912.h ENSGT00940000155601.h.c Common carp reference MODERN SPECIES 21 ENSCCRG00000013424 ENSCCRG00000013420 rock1 (ENSCCRG00000009725) usp14 (ENSCCRG00000005390) thoc1 (ENSCCRG00000007373) aqp1a.2 (ENSCCRG00000068182) aqp1a.1 (ENSCCRG00000063379) ENSCCRG00000007405 myl13 (ENSCCRG00000077228) pth1r (ENSCCRG00000000322) tmie (ENSCCRG00000061065) ENSCCRG00000064351 higd1a (ENSCCRG00000061634) ENSCCRG00000004133 slc22a23 (ENSCCRG00000000245) #20 ENSCCRG00000077145 #22 ssx2ipa (ENSCCRG00000020755) ENSCCRG00000068981 exosc4 (ENSCCRG00000068106) ENSCCRG00000000653 prkacbb (ENSCCRG00000058517) dab1b (ENSCCRG00000058535) si:ch211-188c16.1 (ENSCCRG00000021893) ENSCCRG00000064432 rpe65a (ENSCCRG00000021653) ENSCCRG00000021904 ENSCCRG00000021915 ss18 (ENSCCRG00000068968) ENSCCRG00000027393 ENSCCRG00000062837 ENSCCRG00000001024 Otophysi ANCESTRAL SPECIES 336 ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150.if #22 ENSGT00940000154150.hf.a #22 ENSGT00390000007688.a.b ENSGT00950000183036.a.a.h ENSGT00940000165852 ENSGT00940000156450.d ENSGT00940000175752 ENSGT00940000160126 ENSGT00940000160247 ENSGT00940000158038.c.b Cyprinoidei ANCESTRAL SPECIES 343 ENSGT00940000154843.F.c.a ENSGT00940000157354.j #20 ENSGT00940000154150.if #22 Cyprininae ANCESTRAL SPECIES 165 ENSGT00390000005590 ENSGT00940000155815.q.b ENSGT00940000156259.a.b.b.a ENSGT00530000063187.B.d ENSGT00510000047568.b ENSGT01030000234517.A.m ENSGT00390000009615.r ENSGT00390000016232.r ENSGT00940000157015.i.b.b.a ENSGT00940000157015.i.a.i ENSGT00940000156795.f ENSGT01030000234570.d.b.a.b.b.b.j ENSGT00940000158574.c.b ENSGT00940000154843.F.c.a.a ENSGT00940000157354.j.a #20 ENSGT00940000154150.if #22 ENSGT00390000007688.a.b.b ENSGT00940000165852.d ENSGT00940000156348.B.m.a ENSGT00940000163111.a.b ENSGT00940000158038.c.b.b ENSGT00530000063460.A.a.f.a ENSGT00940000158749.r.b ENSGT01030000234624.b.b.c.b.d ENSGT00940000156352.h.b ENSGT00940000159287.m.d ENSGT00940000163206.b.a.b.b ENSGT00390000004912.h ENSGT00940000155601.h.c ENSGT00940000155638.wb.a.c ENSGT00940000156211.a.b.a Cyprininae_a ANCESTRAL SPECIES 259 ENSGT00940000154843.F.c.a.a ENSGT00940000157354.j.a #20 ENSGT00940000154150.if #22 ENSGT00940000154150.hf.b #22 ENSGT00390000007688.a.b.b ENSGT00940000165852.d ENSGT00940000153348.B.d ENSGT00940000156348.B.m.a ENSGT00940000163111.a.b ENSGT00940000158038.c.b.b ENSGT00530000063460.A.a.f.a ENSGT00390000013685.b ENSGT00940000158749.r.b ENSGT01030000234624.b.b.c.b.d ENSGT00940000156352.h.b ENSGT00940000159287.m.d ENSGT00940000163206.b.a.b.b ENSGT00390000004912.h Golden-line barbel DUPLICATION Golden-line barbel MODERN SPECIES 1190 ENSSGRG00000010855 usp14 (ENSSGRG00000010856) thoc1 (ENSSGRG00000010860) aqp1a.2 (ENSSGRG00000010889) aqp1a.1 (ENSSGRG00000010896) ENSSGRG00000010899 CRHR2 (ENSSGRG00000010902) myl13 (ENSSGRG00000010942) pth1r (ENSSGRG00000010944) ENSSGRG00000010947 tmie (ENSSGRG00000010948) ENSSGRG00000010949 ENSSGRG00000010958 DSP (ENSSGRG00000011017) slc22a23 (ENSSGRG00000011847) #20 ENSSGRG00000011851 #22 Golden-line barbel MODERN SPECIES 2003 slc22a23 (ENSSGRG00000019043) #20 ENSSGRG00000019049 #22 ssx2ipa (ENSSGRG00000019051) ENSSGRG00000019054 Goldfish MODERN SPECIES 11 ENSCARG00000054353 eif2b5 (ENSCARG00000053639) rock1 (ENSCARG00000051534) usp14 (ENSCARG00000049551) thoc1 (ENSCARG00000049321) aqp1a.2 (ENSCARG00000049277) aqp1a.1 (ENSCARG00000049175) ENSCARG00000049159 CRHR2 (ENSCARG00000048814) myl13 (ENSCARG00000048731) pth1r (ENSCARG00000047642) ENSCARG00000047570 ENSCARG00000047535 DSP (ENSCARG00000047306) slc22a23 (ENSCARG00000047265) #20 ENSCARG00000047244 #22 ssx2ipa (ENSCARG00000047224) ENSCARG00000047214 ENSCARG00000047202 ENSCARG00000011319 prkacbb (ENSCARG00000010857) dab1b (ENSCARG00000010763) si:ch211-188c16.1 (ENSCARG00000010725) ENSCARG00000010711 ENSCARG00000010696 ss18 (ENSCARG00000010672) ZNF521 (ENSCARG00000010648) ENSCARG00000010636 polr2d (ENSCARG00000010625) CACNA1E (ENSCARG00000009491) ENSCARG00000009410 Characiphysae ANCESTRAL SPECIES 352 ENSGT00940000157354.j #20 ENSGT00940000154150.if #22 Characiphysae_b ANCESTRAL SPECIES 375 ENSGT00940000157354.j #20 ENSGT00940000154150.if #22 Electric eel MODERN SPECIES 1425 slc22a23 (ENSEEEG00000006403) #20 ENSEEEG00000006406 #22 Osteoglossiformes ANCESTRAL SPECIES 119 ENSGT00940000158019.l ENSGT01100000263524.B.b.b ENSGT00390000000568 ENSGT00950000183102.A.b.a ENSGT00940000158137.c.a.c ENSGT00390000009122 ENSGT00940000155842.s.b ENSGT00940000156080.l ENSGT00940000154872.B ENSGT00940000157394.a ENSGT00940000158092.o ENSGT00940000156328.b ENSGT00940000154843.F.b ENSGT00940000157354.i #20 ENSGT00940000167364 ENSGT00940000154150 #22 ENSGT00390000004746 #24 ENSGT00940000159347.f #25 ENSGT00940000157153.z ENSGT00940000159059.g ENSGT00390000010872 ENSGT00940000162937.a.b ENSGT00940000163866.a.a ENSGT00940000163866.a.b ENSGT00940000162303.a.b ENSGT00440000033640 ENSGT00940000156211.a.a ENSGT00940000154573 #35 ENSGT00940000155265.b.b Asian bonytongue MODERN SPECIES 10 opn7a (ENSSFOG00015011229) TRAPPC8 (ENSSFOG00015011261) mcm3l (ENSSFOG00015011464) si:ch211-191a24.4 (ENSSFOG00015011524) PHLPP1 (ENSSFOG00015011540) tbc1d7 (ENSSFOG00015013112) PHACTR1 (ENSSFOG00015013145) sirt5 (ENSSFOG00015027400) adcy1a (ENSSFOG00015013194) igfbp1a (ENSSFOG00015025197) igfbp3 (ENSSFOG00015030365) TNS3 (ENSSFOG00015013361) DSP (ENSSFOG00015013531) SLC22A23 (ENSSFOG00015013601) #20 ENSSFOG00015013633 ENSSFOG00015013649 #22 BPHL (ENSSFOG00015032944) #24 ripk1l (ENSSFOG00015013668) #25 DUSP22 (ENSSFOG00015013700) irf4a (ENSSFOG00015013722) exoc2 (ENSSFOG00015013797) foxq1a (ENSSFOG00015029527) ENSSFOG00015013941 foxc1a (ENSSFOG00015018620) gmds (ENSSFOG00015032528) MYLK4 (ENSSFOG00015014044) serpinb1 (ENSSFOG00015031077) #35 ENSSFOG00015014090 ENSSFOG00015028260 maf1b (ENSSFOG00015014127) shrprbck1r (ENSSFOG00015014150) P. kingsleyae DUPLICATION P. kingsleyae MODERN SPECIES 20 PHLPP1 (ENSPKIG00000007909) tbc1d7 (ENSPKIG00000007972) ENSPKIG00000008026 ENSPKIG00000008041 sirt5 (ENSPKIG00000008055) adcy1a (ENSPKIG00000008108) igfbp1a (ENSPKIG00000008217) igfbp3 (ENSPKIG00000008313) ENSPKIG00000008426 ENSPKIG00000008447 DSP (ENSPKIG00000008493) DSP (ENSPKIG00000008536) SLC22A23 (ENSPKIG00000008590) #20 ENSPKIG00000008624 ENSPKIG00000008638 #22 TUBB2B (ENSPKIG00000008719) #22 BPHL (ENSPKIG00000008728) #24 DUSP22 (ENSPKIG00000008750) irf4a (ENSPKIG00000008792) exoc2 (ENSPKIG00000008891) ENSPKIG00000009023 FOXC1 (ENSPKIG00000009037) gmds (ENSPKIG00000009075) MYLK4 (ENSPKIG00000009177) SERPINB1 (ENSPKIG00000009257) #35 cops5 (ENSPKIG00000009291) ppp1r42 (ENSPKIG00000009308) TCF24 (ENSPKIG00000009320) ENSPKIG00000009329 ENSPKIG00000009364 MTPAP (ENSPKIG00000009397) P. kingsleyae MODERN SPECIES 20 si:ch211-191a24.4 (ENSPKIG00000007876) PHLPP1 (ENSPKIG00000007909) tbc1d7 (ENSPKIG00000007972) ENSPKIG00000008026 ENSPKIG00000008041 sirt5 (ENSPKIG00000008055) adcy1a (ENSPKIG00000008108) igfbp1a (ENSPKIG00000008217) igfbp3 (ENSPKIG00000008313) ENSPKIG00000008426 ENSPKIG00000008447 DSP (ENSPKIG00000008493) DSP (ENSPKIG00000008536) SLC22A23 (ENSPKIG00000008590) #20 ENSPKIG00000008624 ENSPKIG00000008638 #22 TUBB2B (ENSPKIG00000008719) #22 BPHL (ENSPKIG00000008728) #24 DUSP22 (ENSPKIG00000008750) irf4a (ENSPKIG00000008792) exoc2 (ENSPKIG00000008891) ENSPKIG00000009023 FOXC1 (ENSPKIG00000009037) gmds (ENSPKIG00000009075) MYLK4 (ENSPKIG00000009177) SERPINB1 (ENSPKIG00000009257) #35 cops5 (ENSPKIG00000009291) ppp1r42 (ENSPKIG00000009308) TCF24 (ENSPKIG00000009320) ENSPKIG00000009329 ENSPKIG00000009364 Reedfish DUPLICATION Reedfish DUPLICATION Reedfish MODERN SPECIES 14 bfsp2 (ENSECRG00000003478) TMEM108 (ENSECRG00000003436) ENSECRG00000003427 ENSECRG00000003416 ENSECRG00000003375 #35 ENSECRG00000003337 ENSECRG00000002769 ENSECRG00000002719 ENSECRG00000002697 ENSECRG00000001541 #35 slc22a23 (ENSECRG00000001295) #20 ENSECRG00000001263 ENSECRG00000001239 #22 ENSECRG00000001209 #22 BPHL (ENSECRG00000001177) #24 ENSECRG00000001147 #22 ripk1l (ENSECRG00000001089) #25 dusp22b (ENSECRG00000001028) irf4a (ENSECRG00000000981) exoc2 (ENSECRG00000000920) ENSECRG00000000804 foxq1a (ENSECRG00000003809) ENSECRG00000003807 foxc1a (ENSECRG00000003801) gmds (ENSECRG00000003792) MYLK4 (ENSECRG00000003781) wrnip1 (ENSECRG00000003772) #36 serpinb1 (ENSECRG00000003764) #35 ENSECRG00000003755 amph (ENSECRG00000003738) vps41 (ENSECRG00000003103) Reedfish MODERN SPECIES 14 topbp1 (ENSECRG00000003741) cdv3 (ENSECRG00000003693) bfsp2 (ENSECRG00000003478) TMEM108 (ENSECRG00000003436) ENSECRG00000003427 ENSECRG00000003416 ENSECRG00000003375 #35 ENSECRG00000003337 ENSECRG00000002769 ENSECRG00000002719 ENSECRG00000002697 ENSECRG00000001541 #35 slc22a23 (ENSECRG00000001295) #20 ENSECRG00000001263 ENSECRG00000001239 #22 ENSECRG00000001209 #22 BPHL (ENSECRG00000001177) #24 ENSECRG00000001147 #22 ripk1l (ENSECRG00000001089) #25 dusp22b (ENSECRG00000001028) irf4a (ENSECRG00000000981) exoc2 (ENSECRG00000000920) ENSECRG00000000804 foxq1a (ENSECRG00000003809) ENSECRG00000003807 foxc1a (ENSECRG00000003801) gmds (ENSECRG00000003792) MYLK4 (ENSECRG00000003781) wrnip1 (ENSECRG00000003772) #36 serpinb1 (ENSECRG00000003764) #35 ENSECRG00000003755 Reedfish MODERN SPECIES 14 ENSECRG00000003791 topbp1 (ENSECRG00000003741) cdv3 (ENSECRG00000003693) bfsp2 (ENSECRG00000003478) TMEM108 (ENSECRG00000003436) ENSECRG00000003427 ENSECRG00000003416 ENSECRG00000003375 #35 ENSECRG00000003337 ENSECRG00000002769 ENSECRG00000002719 ENSECRG00000002697 ENSECRG00000001541 #35 slc22a23 (ENSECRG00000001295) #20 ENSECRG00000001263 ENSECRG00000001239 #22 ENSECRG00000001209 #22 BPHL (ENSECRG00000001177) #24 ENSECRG00000001147 #22 ripk1l (ENSECRG00000001089) #25 dusp22b (ENSECRG00000001028) irf4a (ENSECRG00000000981) exoc2 (ENSECRG00000000920) ENSECRG00000000804 foxq1a (ENSECRG00000003809) ENSECRG00000003807 foxc1a (ENSECRG00000003801) gmds (ENSECRG00000003792) MYLK4 (ENSECRG00000003781) wrnip1 (ENSECRG00000003772) #36 serpinb1 (ENSECRG00000003764) #35 Elephant shark DUPLICATION Elephant shark MODERN SPECIES 1491 TUBB1 (ENSCMIG00000014949) ENSCMIG00000014947 prelid3b (ENSCMIG00000014941) ENSCMIG00000014939 ctsa (ENSCMIG00000014818) ENSCMIG00000014787 ENSCMIG00000014785 ENSCMIG00000014783 ENSCMIG00000014780 slc35c2 (ENSCMIG00000014777) ELMO2 (ENSCMIG00000014737) ENSCMIG00000014712 snrpb (ENSCMIG00000014702) ddx27 (ENSCMIG00000014655) PDRG1 (ENSCMIG00000014643) ENSCMIG00000014642 #22 cstf1 (ENSCMIG00000014631) ENSCMIG00000014619 ENSCMIG00000014562 ENSCMIG00000014522 ENSCMIG00000014519 ENSCMIG00000014517 CDH22 (ENSCMIG00000014480) ENSCMIG00000014463 ENSCMIG00000014461 ZNF335 (ENSCMIG00000014455) mmp9 (ENSCMIG00000014451) ENSCMIG00000014337 NCOA5 (ENSCMIG00000014288) ENSCMIG00000014275 tnnc2.2 (ENSCMIG00000014268) Elephant shark MODERN SPECIES 1583 f13a1b (ENSCMIG00000012757) nrn1a (ENSCMIG00000012750) #7 fars2 (ENSCMIG00000012745) #8 ENSCMIG00000012742 rpp40 (ENSCMIG00000012739) #11 CDY1 (ENSCMIG00000012726) #12 eci2 (ENSCMIG00000012704) #13 prpf4bb (ENSCMIG00000012691) #17 PXDC1 (ENSCMIG00000012687) #19 slc22a23 (ENSCMIG00000012684) #20 ENSCMIG00000012678 ENSCMIG00000012677 #22 serpinb1 (ENSCMIG00000012675) #35 lrrc14b (ENSCMIG00000012673) elovl2 (ENSCMIG00000012672) ENSCMIG00000012666 ENSCMIG00000012664 rnf182 (ENSCMIG00000012661) ENSCMIG00000012659 atxn1a (ENSCMIG00000012657) gmpr (ENSCMIG00000012637) mylipb (ENSCMIG00000012620) dtnbp1b (ENSCMIG00000012613) jarid2b (ENSCMIG00000012572) ENSCMIG00000012561 ripor2 (ENSCMIG00000012543) si:dkeyp-120h9.1 (ENSCMIG00000012519) Cyclostomata ANCESTRAL SPECIES ENSGT00940000154150 #22 Lamprey DUPLICATION Lamprey MODERN SPECIES 4664 ENSPMAG00000008696 #22 Lamprey MODERN SPECIES 5055 TUBB2B (ENSPMAG00000000310) #22 Hagfish DUPLICATION Hagfish MODERN SPECIES 918 trmt11 (ENSEBUG00000014368) TVP23A (ENSEBUG00000000497) ENSEBUG00000004755 nubp1 (ENSEBUG00000005245) pmp22a (ENSEBUG00000004003) ENSEBUG00000000393 ENSEBUG00000003663 NT5C (ENSEBUG00000002310) ENSEBUG00000015708 slc35b3 (ENSEBUG00000006749) ENSEBUG00000016396 slc31a1 (ENSEBUG00000006631) ENSEBUG00000003242 ENSEBUG00000012691 #22 ENSEBUG00000006187 ENSEBUG00000010468 TOP3A (ENSEBUG00000004586) ENSEBUG00000014104 DAZAP2 (ENSEBUG00000008111) adprs (ENSEBUG00000011843) ENSEBUG00000017084 rab3ip (ENSEBUG00000015279) tmem258 (ENSEBUG00000013925) nploc4 (ENSEBUG00000000325) ENSEBUG00000000315 ENSEBUG00000001181 ENSEBUG00000005976 PIGC (ENSEBUG00000010574) ENSEBUG00000003602 Hagfish MODERN SPECIES 1327 ENSEBUG00000003218 ENSEBUG00000002769 ENSEBUG00000008794 ENSEBUG00000006383 ENSEBUG00000008005 #22 ENSEBUG00000016820 ENSEBUG00000014944 ENSEBUG00000001621 ENSEBUG00000015941 ENSEBUG00000002893 ENSEBUG00000011295 ENSEBUG00000010763 ENSEBUG00000010674 ENSEBUG00000006725 ENSEBUG00000014367 ENSEBUG00000002431 ENSEBUG00000015535 ENSEBUG00000003664 ENSEBUG00000009841 prdm12b (ENSEBUG00000016780) Ecdysozoa ANCESTRAL SPECIES ENSGT00940000154150 #22 Fruitfly MODERN SPECIES 19 CG8176 (FBgn0037702) Kdm3 (FBgn0037703) mRpL47 (FBgn0014023) Rlb1 (FBgn0014022) Ras85D (FBgn0003205) rump (FBgn0267790) CG8149 (FBgn0037700) RhoL (FBgn0014380) phu (FBgn0043791) CG16779 (FBgn0037698) GstZ2 (FBgn0037697) GstZ1 (FBgn0037696) ps (FBgn0261552) alpha-Man-IIa (FBgn0011740) Task7 (FBgn0037690) betaTub85D (FBgn0003889) #22 CG44261 (FBgn0265201) BBIP1 (FBgn0260237) CG8135 (FBgn0037689) CG9356 (FBgn0037688) CG8132 (FBgn0037687) RpL34b (FBgn0037686) CG34117 (FBgn0083953) Or85f (FBgn0037685) FER (FBgn0000723) Srr (FBgn0037684) CG18473 (FBgn0037683) CG43675 (FBgn0263750) CG45050 (FBgn0266410) pasi2 (FBgn0037680) Aduk (FBgn0037679)