Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a ##22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519 ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT01070000257212 Pecora ANCESTRAL SPECIES 32 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a ##22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT01070000257212 Yarkand deer MODERN SPECIES 30 LY86 (ENSCHYG00000001035) #7 F13A1 (ENSCHYG00000001064) #8 NRN1 (ENSCHYG00000001106) #9 FARS2 (ENSCHYG00000001148) #10 ENSCHYG00000001244 #11 PPP1R3G (ENSCHYG00000001273) #12 RPP40 (ENSCHYG00000001289) #13 CDYL (ENSCHYG00000001347) #14 ECI2 (ENSCHYG00000001423) #15 ENSCHYG00000001482 #16 FAM217A (ENSCHYG00000001494) #17 PRPF4B (ENSCHYG00000001509) #18 SLC22A23 (ENSCHYG00000001566) #19 PSMG4 (ENSCHYG00000001621) #20 ENSCHYG00000001640 #21 TUBB2B (ENSCHYG00000001657) #22 BPHL (ENSCHYG00000001696) #23 RIPK1 (ENSCHYG00000001750) #24 DUSP22 (ENSCHYG00000001773) #25 IRF4 (ENSCHYG00000001815) #26 EXOC2 (ENSCHYG00000001849) #27 FOXF2 (ENSCHYG00000001915) #28 GMDS (ENSCHYG00000001942) #29 WRNIP1 (ENSCHYG00000001991) #30 SERPINB1 (ENSCHYG00000002011) #31 SERPINB9 (ENSCHYG00000002035) #32 Percora_a ANCESTRAL SPECIES 12 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a ##22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.f.a.b.a ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b Siberian musk deer MODERN SPECIES 96 NRN1 (ENSMMSG00000019951) #9 FARS2 (ENSMMSG00000019967) #10 ENSMMSG00000019992 ENSMMSG00000020008 ENSMMSG00000020020 #11 PPP1R3G (ENSMMSG00000020040) #12 RPP40 (ENSMMSG00000020056) #13 CDYL (ENSMMSG00000020126) #14 ECI2 (ENSMMSG00000020168) #15 ENSMMSG00000020286 #16 FAM217A (ENSMMSG00000000080) #17 PRPF4B (ENSMMSG00000000148) #18 PXDC1 (ENSMMSG00000000205) SLC22A23 (ENSMMSG00000000252) #19 PSMG4 (ENSMMSG00000000373) #20 TUBB2B (ENSMMSG00000000409) #22 BPHL (ENSMMSG00000000460) #23 RIPK1 (ENSMMSG00000000490) #24 NQO2 (ENSMMSG00000000521) ENSMMSG00000000568 ENSMMSG00000000678 ENSMMSG00000001423 ENSMMSG00000001460 ENSMMSG00000001478 ENSMMSG00000001505 SERPINB9 (ENSMMSG00000001536) #32 SERPINB1 (ENSMMSG00000001564) #31 WRNIP1 (ENSMMSG00000001591) #30 MYLK4 (ENSMMSG00000001649) GMDS (ENSMMSG00000001775) #29 FOXC1 (ENSMMSG00000001806) Bovidae ANCESTRAL SPECIES 13 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00940000154150.xb.s.a ##22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.f.a.b.a ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b Bovinae ANCESTRAL SPECIES 9 ENSGT00940000157533 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.e.b.b.a ENSGT00940000154519.e.a ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT01070000257212 Bos ANCESTRAL SPECIES 37 ENSGT00950000185466 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000154502.o.b ENSGT00940000163747 #12 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.e.b.b.b.a ENSGT00940000154519.e.b.b.a.c ENSGT00940000154519.e.a.a ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b Bos_a ANCESTRAL SPECIES 49 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000154502.o.b ENSGT00940000163747 #12 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.s.b ##22 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.e.b.b.b.a ENSGT00940000154519.e.b.b.a.c ENSGT00940000154519.e.a.a ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b Domestic yak MODERN SPECIES 16 ENSBGRG00000007376 ENSBGRG00000007447 #11 SDCBP (ENSBGRG00000007518) PPP1R3G (ENSBGRG00000007602) #12 ENSBGRG00000007618 RPP40 (ENSBGRG00000007644) #13 CDYL (ENSBGRG00000007875) #14 ECI2 (ENSBGRG00000007960) #15 ENSBGRG00000008092 #16 FAM217A (ENSBGRG00000008153) #17 PRPF4B (ENSBGRG00000008304) #18 PXDC1 (ENSBGRG00000008589) ENSBGRG00000008631 SLC22A23 (ENSBGRG00000008663) #19 ENSBGRG00000008779 #20 TUBB2A (ENSBGRG00000008862) #22 BPHL (ENSBGRG00000008956) #23 RIPK1 (ENSBGRG00000009042) #24 NQO2 (ENSBGRG00000009131) ENSBGRG00000009235 ENSBGRG00000009283 ENSBGRG00000009409 ENSBGRG00000010125 SERPINB9 (ENSBGRG00000010171) #32 SERPINB1 (ENSBGRG00000010205) #31 WRNIP1 (ENSBGRG00000010299) #30 MYLK4 (ENSBGRG00000010518) GMDS (ENSBGRG00000011025) #29 FOXC1 (ENSBGRG00000011734) FOXF2 (ENSBGRG00000011788) #28 ENSBGRG00000011879 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #19 ENSBMUG00000009939 ##22 ENSBMUG00000009950 #22 ENSBMUG00000009966 ##22 BPHL (ENSBMUG00000009972) #23 RIPK1 (ENSBMUG00000009980) #24 NQO2 (ENSBMUG00000010004) ENSBMUG00000010067 Bos_b ANCESTRAL SPECIES 8 ENSGT00950000185466 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000154502.o.b ENSGT00940000163747 #12 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.e.b.b.b.a ENSGT00940000154519.e.b.b.a.c ENSGT00940000154519.e.a.a ENSGT00940000154519.e.a.b ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 Cow DUPLICATION Cow MODERN SPECIES 15 ENSBTAG00000049778 FARS2 (ENSBTAG00000018072) #10 LYRM4 (ENSBTAG00000031432) #11 ENSBTAG00000018309 PPP1R3G (ENSBTAG00000054777) #12 ENSBTAG00000051366 RPP40 (ENSBTAG00000003332) #13 CDYL (ENSBTAG00000016397) #14 ECI2 (ENSBTAG00000015178) #15 ENSBTAG00000015176 #16 FAM217A (ENSBTAG00000002089) #17 PRPF4B (ENSBTAG00000002086) #18 PXDC1 (ENSBTAG00000026919) SLC22A23 (ENSBTAG00000010943) #19 PSMG4 (ENSBTAG00000031249) #20 TUBB2B (ENSBTAG00000054330) #22 TUBB2A (ENSBTAG00000048485) #22 BPHL (ENSBTAG00000006379) #23 RIPK1 (ENSBTAG00000006378) #24 ENSBTAG00000051842 NQO2 (ENSBTAG00000000786) ENSBTAG00000049906 ENSBTAG00000053741 ENSBTAG00000054098 SERPINB6 (ENSBTAG00000050155) ENSBTAG00000053511 SERPINB9 (ENSBTAG00000031267) #32 SERPINB1 (ENSBTAG00000011975) #31 WRNIP1 (ENSBTAG00000006166) #30 MYLK4 (ENSBTAG00000012079) GMDS (ENSBTAG00000012058) #29 Cow MODERN SPECIES 15 FARS2 (ENSBTAG00000018072) #10 LYRM4 (ENSBTAG00000031432) #11 ENSBTAG00000018309 PPP1R3G (ENSBTAG00000054777) #12 ENSBTAG00000051366 RPP40 (ENSBTAG00000003332) #13 CDYL (ENSBTAG00000016397) #14 ECI2 (ENSBTAG00000015178) #15 ENSBTAG00000015176 #16 FAM217A (ENSBTAG00000002089) #17 PRPF4B (ENSBTAG00000002086) #18 PXDC1 (ENSBTAG00000026919) SLC22A23 (ENSBTAG00000010943) #19 PSMG4 (ENSBTAG00000031249) #20 TUBB2B (ENSBTAG00000054330) #22 TUBB2A (ENSBTAG00000048485) #22 BPHL (ENSBTAG00000006379) #23 RIPK1 (ENSBTAG00000006378) #24 ENSBTAG00000051842 NQO2 (ENSBTAG00000000786) ENSBTAG00000049906 ENSBTAG00000053741 ENSBTAG00000054098 SERPINB6 (ENSBTAG00000050155) ENSBTAG00000053511 SERPINB9 (ENSBTAG00000031267) #32 SERPINB1 (ENSBTAG00000011975) #31 WRNIP1 (ENSBTAG00000006166) #30 MYLK4 (ENSBTAG00000012079) GMDS (ENSBTAG00000012058) #29 ENSBTAG00000050875 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 15 LYRM4 (ENSBIXG00005026120) #11 ENSBIXG00005006186 PPP1R3G (ENSBIXG00005026071) #12 ENSBIXG00005026061 RPP40 (ENSBIXG00005026040) #13 CDYL (ENSBIXG00005004428) #14 ENSBIXG00005007197 ENSBIXG00005025934 ECI2 (ENSBIXG00005025904) #15 ENSBIXG00005025813 #16 FAM217A (ENSBIXG00005025792) #17 PRPF4B (ENSBIXG00005025750) #18 PXDC1 (ENSBIXG00005025631) SLC22A23 (ENSBIXG00005004357) #19 PSMG4 (ENSBIXG00005025413) #20 TUBB2A (ENSBIXG00005025393) #22 ENSBIXG00005025336 #22 BPHL (ENSBIXG00005025316) #23 RIPK1 (ENSBIXG00005004294) #24 ENSBIXG00005025217 NQO2 (ENSBIXG00005025196) ENSBIXG00005025063 ENSBIXG00005024949 ENSBIXG00005024919 SERPINB9 (ENSBIXG00005024704) #32 SERPINB1 (ENSBIXG00005024645) #31 WRNIP1 (ENSBIXG00005006680) #30 MYLK4 (ENSBIXG00005024549) GMDS (ENSBIXG00005024373) #29 FOXF2 (ENSBIXG00005024208) #28 FOXQ1 (ENSBIXG00005024190) Hybrid Bos Indicus MODERN SPECIES 15 ENSBIXG00005006186 PPP1R3G (ENSBIXG00005026071) #12 ENSBIXG00005026061 RPP40 (ENSBIXG00005026040) #13 CDYL (ENSBIXG00005004428) #14 ENSBIXG00005007197 ENSBIXG00005025934 ECI2 (ENSBIXG00005025904) #15 ENSBIXG00005025813 #16 FAM217A (ENSBIXG00005025792) #17 PRPF4B (ENSBIXG00005025750) #18 PXDC1 (ENSBIXG00005025631) SLC22A23 (ENSBIXG00005004357) #19 PSMG4 (ENSBIXG00005025413) #20 TUBB2A (ENSBIXG00005025393) #22 ENSBIXG00005025336 #22 BPHL (ENSBIXG00005025316) #23 RIPK1 (ENSBIXG00005004294) #24 ENSBIXG00005025217 NQO2 (ENSBIXG00005025196) ENSBIXG00005025063 ENSBIXG00005024949 ENSBIXG00005024919 SERPINB9 (ENSBIXG00005024704) #32 SERPINB1 (ENSBIXG00005024645) #31 WRNIP1 (ENSBIXG00005006680) #30 MYLK4 (ENSBIXG00005024549) GMDS (ENSBIXG00005024373) #29 FOXF2 (ENSBIXG00005024208) #28 FOXQ1 (ENSBIXG00005024190) EXOC2 (ENSBIXG00005002582) #27 Caprinae ANCESTRAL SPECIES 41 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106 #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00940000175246 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.e.b.a ENSGT00940000154519.f.a.a.a.b ENSGT00940000154931 #32 ENSGT00940000154519.f.a.a.a.a.a ENSGT00940000154519.f.a.b.a ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 12 RREB1 (ENSOARG00020025006) LY86 (ENSOARG00020025014) #7 F13A1 (ENSOARG00020025035) #8 NRN1 (ENSOARG00020025044) #9 FARS2 (ENSOARG00020025055) #10 LYRM4 (ENSOARG00020025075) #11 PPP1R3G (ENSOARG00020025083) #12 RPP40 (ENSOARG00020025115) #13 CDYL (ENSOARG00020025174) #14 ENSOARG00020025197 #16 PRPF4B (ENSOARG00020025239) #18 ENSOARG00020025307 SLC22A23 (ENSOARG00020006359) #19 TUBB2A (ENSOARG00020006431) #22 PSMG4 (ENSOARG00020006491) #20 TUBB2B (ENSOARG00020006539) #22 ENSOARG00020006586 RIPK1 (ENSOARG00020006661) #23 RIPK1 (ENSOARG00020006711) #24 ENSOARG00020006784 ENSOARG00020006863 ENSOARG00020007031 ENSOARG00020008292 ENSOARG00020008345 ENSOARG00020008440 SERPINB9 (ENSOARG00020008599) #32 ENSOARG00020008634 SERPINB1 (ENSOARG00020008679) #31 WRNIP1 (ENSOARG00020008718) #30 ENSOARG00020008839 ENSOARG00020009120 Rambouillet Sheep MODERN SPECIES 12 SSR1 (ENSOARG00020024975) ENSOARG00020024996 RREB1 (ENSOARG00020025006) LY86 (ENSOARG00020025014) #7 F13A1 (ENSOARG00020025035) #8 NRN1 (ENSOARG00020025044) #9 FARS2 (ENSOARG00020025055) #10 LYRM4 (ENSOARG00020025075) #11 PPP1R3G (ENSOARG00020025083) #12 RPP40 (ENSOARG00020025115) #13 CDYL (ENSOARG00020025174) #14 ENSOARG00020025197 #16 PRPF4B (ENSOARG00020025239) #18 ENSOARG00020025307 SLC22A23 (ENSOARG00020006359) #19 TUBB2A (ENSOARG00020006431) #22 PSMG4 (ENSOARG00020006491) #20 TUBB2B (ENSOARG00020006539) #22 ENSOARG00020006586 RIPK1 (ENSOARG00020006661) #23 RIPK1 (ENSOARG00020006711) #24 ENSOARG00020006784 ENSOARG00020006863 ENSOARG00020007031 ENSOARG00020008292 ENSOARG00020008345 ENSOARG00020008440 SERPINB9 (ENSOARG00020008599) #32 ENSOARG00020008634 SERPINB1 (ENSOARG00020008679) #31 WRNIP1 (ENSOARG00020008718) #30 Goat DUPLICATION Goat MODERN SPECIES 15 NRN1 (ENSCHIG00000023169) #9 ENSCHIG00000017222 FARS2 (ENSCHIG00000017678) #10 LYRM4 (ENSCHIG00000010740) #11 PPP1R3G (ENSCHIG00000017990) #12 ENSCHIG00000022246 RPP40 (ENSCHIG00000016849) #13 CDYL (ENSCHIG00000021846) #14 ECI2 (ENSCHIG00000016201) #15 ENSCHIG00000021666 #16 ENSCHIG00000023235 #17 PRPF4B (ENSCHIG00000014208) #18 PXDC1 (ENSCHIG00000025104) SLC22A23 (ENSCHIG00000013035) #19 PSMG4 (ENSCHIG00000018602) #20 TUBB2B (ENSCHIG00000021272) #22 TUBB2A (ENSCHIG00000025595) #22 BPHL (ENSCHIG00000018519) #23 RIPK1 (ENSCHIG00000026577) #24 NQO2 (ENSCHIG00000014702) ENSCHIG00000020501 ENSCHIG00000014090 ENSCHIG00000013116 HDGFL1 (ENSCHIG00000011655) ENSCHIG00000010444 ENSCHIG00000017218 SOX4 (ENSCHIG00000013419) CDKAL1 (ENSCHIG00000022647) ENSCHIG00000022931 ENSCHIG00000010662 MBOAT1 (ENSCHIG00000009573) Goat MODERN SPECIES 15 ENSCHIG00000017222 FARS2 (ENSCHIG00000017678) #10 LYRM4 (ENSCHIG00000010740) #11 PPP1R3G (ENSCHIG00000017990) #12 ENSCHIG00000022246 RPP40 (ENSCHIG00000016849) #13 CDYL (ENSCHIG00000021846) #14 ECI2 (ENSCHIG00000016201) #15 ENSCHIG00000021666 #16 ENSCHIG00000023235 #17 PRPF4B (ENSCHIG00000014208) #18 PXDC1 (ENSCHIG00000025104) SLC22A23 (ENSCHIG00000013035) #19 PSMG4 (ENSCHIG00000018602) #20 TUBB2B (ENSCHIG00000021272) #22 TUBB2A (ENSCHIG00000025595) #22 BPHL (ENSCHIG00000018519) #23 RIPK1 (ENSCHIG00000026577) #24 NQO2 (ENSCHIG00000014702) ENSCHIG00000020501 ENSCHIG00000014090 ENSCHIG00000013116 HDGFL1 (ENSCHIG00000011655) ENSCHIG00000010444 ENSCHIG00000017218 SOX4 (ENSCHIG00000013419) CDKAL1 (ENSCHIG00000022647) ENSCHIG00000022931 ENSCHIG00000010662 MBOAT1 (ENSCHIG00000009573) ID4 (ENSCHIG00000020094) Cetacea ANCESTRAL SPECIES 7 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106.u #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.c ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT00390000010872 #27 ENSGT00940000159059 #26 Blue whale MODERN SPECIES 2 F13A1 (ENSBMSG00010007558) #8 NRN1 (ENSBMSG00010007552) #9 FARS2 (ENSBMSG00010007535) #10 LYRM4 (ENSBMSG00010007512) #11 PPP1R3G (ENSBMSG00010007505) #12 RPP40 (ENSBMSG00010007489) #13 CDYL (ENSBMSG00010007473) #14 ECI2 (ENSBMSG00010007466) #15 ENSBMSG00010007461 ENSBMSG00010007453 #16 FAM217A (ENSBMSG00010007442) #17 PRPF4B (ENSBMSG00010007428) #18 PXDC1 (ENSBMSG00010007412) SLC22A23 (ENSBMSG00010007297) #19 PSMG4 (ENSBMSG00010007269) #20 TUBB2A (ENSBMSG00010007239) #22 BPHL (ENSBMSG00010007209) #23 RIPK1 (ENSBMSG00010007199) #24 NQO2 (ENSBMSG00010007187) ENSBMSG00010007165 SERPINB9 (ENSBMSG00010007151) #32 SERPINB1 (ENSBMSG00010007136) #31 WRNIP1 (ENSBMSG00010007123) #30 MYLK4 (ENSBMSG00010007088) ENSBMSG00010007069 GMDS (ENSBMSG00010007043) #29 FOXC1 (ENSBMSG00010007030) FOXF2 (ENSBMSG00010007027) #28 FOXQ1 (ENSBMSG00010007017) EXOC2 (ENSBMSG00010006978) #27 IRF4 (ENSBMSG00010006934) #26 Odontoceti ANCESTRAL SPECIES 5 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106.u #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.c ENSGT00940000154931 #32 ENSGT00940000154573 #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT00390000010872 #27 ENSGT00940000159059 #26 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 9 LY86 (ENSPCTG00005008221) #7 F13A1 (ENSPCTG00005008252) #8 NRN1 (ENSPCTG00005008319) #9 ENSPCTG00005008355 FARS2 (ENSPCTG00005008380) #10 LYRM4 (ENSPCTG00005008407) #11 PPP1R3G (ENSPCTG00005008426) #12 RPP40 (ENSPCTG00005008452) #13 ENSPCTG00005008550 #14 ECI2 (ENSPCTG00005008598) #15 ENSPCTG00005008657 #16 FAM217A (ENSPCTG00005008731) #17 PRPF4B (ENSPCTG00005008801) #18 PXDC1 (ENSPCTG00005008936) TUBB2A (ENSPCTG00005008977) #22 TUBB2A (ENSPCTG00005009021) #22 BPHL (ENSPCTG00005009057) #23 RIPK1 (ENSPCTG00005009207) #24 NQO2 (ENSPCTG00005009321) ENSPCTG00005009401 SERPINB9 (ENSPCTG00005009506) #32 ENSPCTG00005009581 #31 WRNIP1 (ENSPCTG00005009615) #30 MYLK4 (ENSPCTG00005009809) ENSPCTG00005010105 GMDS (ENSPCTG00005010205) #29 ENSPCTG00005010376 FOXF2 (ENSPCTG00005010432) #28 EXOC2 (ENSPCTG00005010489) #27 IRF4 (ENSPCTG00005010577) #26 DUSP22 (ENSPCTG00005010689) #25 Sperm whale MODERN SPECIES 9 DSP (ENSPCTG00005007793) LY86 (ENSPCTG00005008221) #7 F13A1 (ENSPCTG00005008252) #8 NRN1 (ENSPCTG00005008319) #9 ENSPCTG00005008355 FARS2 (ENSPCTG00005008380) #10 LYRM4 (ENSPCTG00005008407) #11 PPP1R3G (ENSPCTG00005008426) #12 RPP40 (ENSPCTG00005008452) #13 ENSPCTG00005008550 #14 ECI2 (ENSPCTG00005008598) #15 ENSPCTG00005008657 #16 FAM217A (ENSPCTG00005008731) #17 PRPF4B (ENSPCTG00005008801) #18 PXDC1 (ENSPCTG00005008936) TUBB2A (ENSPCTG00005008977) #22 TUBB2A (ENSPCTG00005009021) #22 BPHL (ENSPCTG00005009057) #23 RIPK1 (ENSPCTG00005009207) #24 NQO2 (ENSPCTG00005009321) ENSPCTG00005009401 SERPINB9 (ENSPCTG00005009506) #32 ENSPCTG00005009581 #31 WRNIP1 (ENSPCTG00005009615) #30 MYLK4 (ENSPCTG00005009809) ENSPCTG00005010105 GMDS (ENSPCTG00005010205) #29 ENSPCTG00005010376 FOXF2 (ENSPCTG00005010432) #28 EXOC2 (ENSPCTG00005010489) #27 IRF4 (ENSPCTG00005010577) #26 Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106.u.a #14 ENSGT00940000155105 #15 ENSGT00390000008360 #16 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.c ENSGT00940000154573.u #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT00390000010872 #27 ENSGT00940000159059 #26 ENSGT00940000157153 #25 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000157533 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106.u.a #14 ENSGT00940000155105 #15 ENSGT00940000154543.b #17 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.c ENSGT00940000154573.u #31 ENSGT00390000008538 #30 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00940000162937.b ENSGT00390000010872 #27 ENSGT00940000159059 #26 ENSGT00940000157153 #25 Monodontidae ANCESTRAL SPECIES 4 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 #7 ENSGT01050000244939.a.a.a #8 ENSGT00530000063853.a.a.b #9 ENSGT00940000158071 #10 ENSGT00940000157289.a #11 ENSGT00940000163747 #12 ENSGT00390000014167 #13 ENSGT00940000155106.u.a #14 ENSGT00940000155105 #15 ENSGT00940000155562 #18 ENSGT00390000009209 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #22 ENSGT00390000004746 #23 ENSGT00940000159347 #24 ENSGT00940000156563 ENSGT00940000154519.c ENSGT00390000008538 #30 ENSGT01010000230145 ENSGT00940000156211.b ENSGT01000000221719 ENSGT00440000033640 #29 ENSGT00940000162303.b ENSGT00940000162527 #28 ENSGT00390000010872 #27 ENSGT00940000159059 #26 ENSGT00940000157153 #25 Narwhal MODERN SPECIES 310 RREB1 (ENSMMNG00015010935) LY86 (ENSMMNG00015010924) #7 F13A1 (ENSMMNG00015010895) #8 NRN1 (ENSMMNG00015010879) #9 ENSMMNG00015010864 FARS2 (ENSMMNG00015010823) #10 ENSMMNG00015010792 #11 PPP1R3G (ENSMMNG00015010783) #12 RPP40 (ENSMMNG00015010735) #13 ENSMMNG00015010684 #14 ECI2 (ENSMMNG00015010653) #15 PRPF4B (ENSMMNG00015010640) #18 PXDC1 (ENSMMNG00015010618) SLC22A23 (ENSMMNG00015010564) #19 PSMG4 (ENSMMNG00015010506) #20 TUBB2B (ENSMMNG00015010464) #22 BPHL (ENSMMNG00015010397) #23 RIPK1 (ENSMMNG00015010383) #24 NQO2 (ENSMMNG00015010357) ENSMMNG00015010309 WRNIP1 (ENSMMNG00015010266) #30 ENSMMNG00015010243 MYLK4 (ENSMMNG00015010218) ENSMMNG00015010189 GMDS (ENSMMNG00015014105) #29 FOXC1 (ENSMMNG00015014093) FOXF2 (ENSMMNG00015014085) #28 EXOC2 (ENSMMNG00015014030) #27 IRF4 (ENSMMNG00015014004) #26 DUSP22 (ENSMMNG00015013987) #25 VAMP7 (ENSMMNG00015013948) Beluga whale MODERN SPECIES 10 RREB1 (ENSDLEG00000001663) LY86 (ENSDLEG00000001638) #7 F13A1 (ENSDLEG00000001613) #8 NRN1 (ENSDLEG00000001599) #9 FARS2 (ENSDLEG00000001576) #10 ENSDLEG00000001554 LYRM4 (ENSDLEG00000001535) #11 PPP1R3G (ENSDLEG00000001526) #12 RPP40 (ENSDLEG00000001512) #13 ENSDLEG00000001490 #14 ECI2 (ENSDLEG00000001462) #15 PRPF4B (ENSDLEG00000001431) #18 ENSDLEG00000001426 SLC22A23 (ENSDLEG00000001395) #19 PSMG4 (ENSDLEG00000001383) #20 TUBB2A (ENSDLEG00000001358) #22 BPHL (ENSDLEG00000001285) #23 RIPK1 (ENSDLEG00000001254) #24 NQO2 (ENSDLEG00000001236) ENSDLEG00000001211 WRNIP1 (ENSDLEG00000001184) #30 ENSDLEG00000001175 ENSDLEG00000001169 GMDS (ENSDLEG00000001155) #29 FOXC1 (ENSDLEG00000001148) FOXF2 (ENSDLEG00000001139) #28 ENSDLEG00000001130 EXOC2 (ENSDLEG00000000911) #27 IRF4 (ENSDLEG00000000806) #26 ENSDLEG00000000793 #25 ENSDLEG00000000776 #25 Vaquita MODERN SPECIES 2 RREB1 (ENSPSNG00000014036) LY86 (ENSPSNG00000014090) #7 F13A1 (ENSPSNG00000014208) #8 NRN1 (ENSPSNG00000014328) #9 FARS2 (ENSPSNG00000014384) #10 LYRM4 (ENSPSNG00000014436) #11 PPP1R3G (ENSPSNG00000014484) #12 RPP40 (ENSPSNG00000014549) #13 ENSPSNG00000014779 #14 ECI2 (ENSPSNG00000014875) #15 FAM217A (ENSPSNG00000014949) #17 PRPF4B (ENSPSNG00000015086) #18 PXDC1 (ENSPSNG00000015171) SLC22A23 (ENSPSNG00000015233) #19 PSMG4 (ENSPSNG00000015357) #20 TUBB2A (ENSPSNG00000015438) #22 BPHL (ENSPSNG00000015565) #23 RIPK1 (ENSPSNG00000015681) #24 NQO2 (ENSPSNG00000015747) ENSPSNG00000015836 SERPINB1 (ENSPSNG00000015980) #31 WRNIP1 (ENSPSNG00000016040) #30 MYLK4 (ENSPSNG00000016111) ENSPSNG00000016357 GMDS (ENSPSNG00000016429) #29 ENSPSNG00000016521 FOXF2 (ENSPSNG00000016588) #28 FOXQ1 (ENSPSNG00000016632) EXOC2 (ENSPSNG00000016671) #27 IRF4 (ENSPSNG00000016722) #26 DUSP22 (ENSPSNG00000016848) #25 Dolphin DUPLICATION Dolphin MODERN SPECIES 161 PSMG4 (ENSTTRG00000006146) #20 TUBB2B (ENSTTRG00000006144) #22 ENSTTRG00000006142 #22 BPHL (ENSTTRG00000006140) #23 ENSTTRG00000006137 #24 NQO2 (ENSTTRG00000006128) Dolphin MODERN SPECIES 161 PSMG4 (ENSTTRG00000006146) #20 TUBB2B (ENSTTRG00000006144) #22 ENSTTRG00000006142 #22 BPHL (ENSTTRG00000006140) #23 ENSTTRG00000006137 #24 NQO2 (ENSTTRG00000006128)