Laurasiatheria DUPLICATION Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417 #21 ENSGT00940000154150.xb #23 ENSGT00940000175246 ENSGT00940000154150.wb.b ##23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00940000175246 ENSGT00940000154150.wb.b ##23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 Laurasiatheria_b ANCESTRAL SPECIES 7 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 Carnivora ANCESTRAL SPECIES 4 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 Felidae ANCESTRAL SPECIES 5 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000009819.a.b.a.a.b.b.b #26 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00550000074840.z #32 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Panthera ANCESTRAL SPECIES 30 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000009819.a.b.a.b ##26 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00550000074840.z #32 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Panthera_a ANCESTRAL SPECIES 32 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00390000009819.a.b.a.b ##26 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00550000074840.z #32 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 leopard DUPLICATION leopard MODERN SPECIES 79 ENSPPRG00000006505 #7 FARS2 (ENSPPRG00000006027) #8 LYRM4 (ENSPPRG00000005664) #9 PPP1R3G (ENSPPRG00000015138) #10 RPP40 (ENSPPRG00000005612) #11 CDYL (ENSPPRG00000004629) #12 ENSPPRG00000003975 #13 ECI2 (ENSPPRG00000003341) #14 ENSPPRG00000002615 #15 FAM217A (ENSPPRG00000002142) #16 PRPF4B (ENSPPRG00000001709) #17 PXDC1 (ENSPPRG00000001339) #18 SLC22A23 (ENSPPRG00000000705) #19 PSMG4 (ENSPPRG00000022994) #20 ENSPPRG00000023661 #21 TUBB2B (ENSPPRG00000023755) #22 TUBB2A (ENSPPRG00000023932) #23 BPHL (ENSPPRG00000023975) #24 RIPK1 (ENSPPRG00000024036) #25 ENSPPRG00000024159 #26 NQO2 (ENSPPRG00000024196) #27 ENSPPRG00000024624 #28 SERPINB9 (ENSPPRG00000020115) #29 SERPINB1 (ENSPPRG00000019499) #30 WRNIP1 (ENSPPRG00000018070) #31 ENSPPRG00000015212 #32 MYLK4 (ENSPPRG00000014341) #33 GMDS (ENSPPRG00000011992) #34 FOXC1 (ENSPPRG00000014362) #35 FOXF2 (ENSPPRG00000011053) #36 FOXQ1 (ENSPPRG00000014349) #37 leopard MODERN SPECIES 79 FARS2 (ENSPPRG00000006027) #8 LYRM4 (ENSPPRG00000005664) #9 PPP1R3G (ENSPPRG00000015138) #10 RPP40 (ENSPPRG00000005612) #11 CDYL (ENSPPRG00000004629) #12 ENSPPRG00000003975 #13 ECI2 (ENSPPRG00000003341) #14 ENSPPRG00000002615 #15 FAM217A (ENSPPRG00000002142) #16 PRPF4B (ENSPPRG00000001709) #17 PXDC1 (ENSPPRG00000001339) #18 SLC22A23 (ENSPPRG00000000705) #19 PSMG4 (ENSPPRG00000022994) #20 ENSPPRG00000023661 #21 TUBB2B (ENSPPRG00000023755) #22 TUBB2A (ENSPPRG00000023932) #23 BPHL (ENSPPRG00000023975) #24 RIPK1 (ENSPPRG00000024036) #25 ENSPPRG00000024159 #26 NQO2 (ENSPPRG00000024196) #27 ENSPPRG00000024624 #28 SERPINB9 (ENSPPRG00000020115) #29 SERPINB1 (ENSPPRG00000019499) #30 WRNIP1 (ENSPPRG00000018070) #31 ENSPPRG00000015212 #32 MYLK4 (ENSPPRG00000014341) #33 GMDS (ENSPPRG00000011992) #34 FOXC1 (ENSPPRG00000014362) #35 FOXF2 (ENSPPRG00000011053) #36 FOXQ1 (ENSPPRG00000014349) #37 EXOC2 (ENSPPRG00000010340) lion DUPLICATION lion MODERN SPECIES 28 F13A1 (ENSPLOG00000019314) NRN1 (ENSPLOG00000019270) FARS2 (ENSPLOG00000019222) #8 LYRM4 (ENSPLOG00000019169) #9 ENSPLOG00000019120 #10 RPP40 (ENSPLOG00000019021) #11 CDYL (ENSPLOG00000018938) #12 ECI2 (ENSPLOG00000018858) #14 ENSPLOG00000018809 #15 FAM217A (ENSPLOG00000018759) #16 PRPF4B (ENSPLOG00000018709) #17 FAM50B (ENSPLOG00000018680) PXDC1 (ENSPLOG00000018629) #18 SLC22A23 (ENSPLOG00000018579) #19 ENSPLOG00000018533 #21 TUBB2B (ENSPLOG00000018497) #23 ENSPLOG00000018446 #23 BPHL (ENSPLOG00000018383) #24 RIPK1 (ENSPLOG00000018363) #25 ENSPLOG00000018333 ##26 NQO2 (ENSPLOG00000018239) #27 SERPINB9 (ENSPLOG00000018094) #29 SERPINB1 (ENSPLOG00000018010) #30 WRNIP1 (ENSPLOG00000017949) #31 ENSPLOG00000017919 ENSPLOG00000017887 #32 MYLK4 (ENSPLOG00000017722) #33 GMDS (ENSPLOG00000017599) #34 ENSPLOG00000017561 #35 FOXF2 (ENSPLOG00000017522) #36 FOXQ1 (ENSPLOG00000017508) #37 lion MODERN SPECIES 28 NRN1 (ENSPLOG00000019270) FARS2 (ENSPLOG00000019222) #8 LYRM4 (ENSPLOG00000019169) #9 ENSPLOG00000019120 #10 RPP40 (ENSPLOG00000019021) #11 CDYL (ENSPLOG00000018938) #12 ECI2 (ENSPLOG00000018858) #14 ENSPLOG00000018809 #15 FAM217A (ENSPLOG00000018759) #16 PRPF4B (ENSPLOG00000018709) #17 FAM50B (ENSPLOG00000018680) PXDC1 (ENSPLOG00000018629) #18 SLC22A23 (ENSPLOG00000018579) #19 ENSPLOG00000018533 #21 TUBB2B (ENSPLOG00000018497) #23 ENSPLOG00000018446 #23 BPHL (ENSPLOG00000018383) #24 RIPK1 (ENSPLOG00000018363) #25 ENSPLOG00000018333 ##26 NQO2 (ENSPLOG00000018239) #27 SERPINB9 (ENSPLOG00000018094) #29 SERPINB1 (ENSPLOG00000018010) #30 WRNIP1 (ENSPLOG00000017949) #31 ENSPLOG00000017919 ENSPLOG00000017887 #32 MYLK4 (ENSPLOG00000017722) #33 GMDS (ENSPLOG00000017599) #34 ENSPLOG00000017561 #35 FOXF2 (ENSPLOG00000017522) #36 FOXQ1 (ENSPLOG00000017508) #37 ENSPLOG00000017393 Cat MODERN SPECIES 236 NRN1 (ENSFCAG00000030503) FARS2 (ENSFCAG00000014441) #8 ENSFCAG00000051390 LYRM4 (ENSFCAG00000038299) #9 PPP1R3G (ENSFCAG00000041787) #10 RPP40 (ENSFCAG00000009249) #11 CDYL (ENSFCAG00000028494) #12 ECI2 (ENSFCAG00000012171) #14 ENSFCAG00000045175 #15 FAM217A (ENSFCAG00000012169) #16 PRPF4B (ENSFCAG00000030050) #17 FAM50B (ENSFCAG00000028350) PXDC1 (ENSFCAG00000039703) #18 SLC22A23 (ENSFCAG00000025838) #19 PSMG4 (ENSFCAG00000046735) #20 TUBB2B (ENSFCAG00000014626) #23 BPHL (ENSFCAG00000046730) #24 RIPK1 (ENSFCAG00000014625) #25 ENSFCAG00000026193 #26 NQO2 (ENSFCAG00000024592) #27 SERPINB6 (ENSFCAG00000000810) #28 SERPINB9 (ENSFCAG00000000807) #29 SERPINB1 (ENSFCAG00000008689) #30 WRNIP1 (ENSFCAG00000042833) #31 ENSFCAG00000053862 ENSFCAG00000034906 #32 MYLK4 (ENSFCAG00000034770) #33 GMDS (ENSFCAG00000004783) #34 FOXC1 (ENSFCAG00000043380) #35 FOXF2 (ENSFCAG00000005901) #36 FOXQ1 (ENSFCAG00000036417) #37 Caniformia ANCESTRAL SPECIES 3 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 Caniformia_b ANCESTRAL SPECIES 31 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 Ursidae ANCESTRAL SPECIES 39 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b.x ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.b #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 ENSGT00390000010872 Giant Panda DUPLICATION Giant Panda MODERN SPECIES 336 ENSAMEG00000031238 #23 Giant Panda MODERN SPECIES 15 NRN1 (ENSAMEG00000024302) FARS2 (ENSAMEG00000027009) #8 LYRM4 (ENSAMEG00000017445) #9 PPP1R3G (ENSAMEG00000025070) #10 RPP40 (ENSAMEG00000012938) #11 CDYL (ENSAMEG00000012914) #12 ENSAMEG00000012910 #13 ECI2 (ENSAMEG00000012888) #14 ENSAMEG00000012884 #15 FAM217A (ENSAMEG00000012875) #16 PRPF4B (ENSAMEG00000012832) #17 FAM50B (ENSAMEG00000019077) PXDC1 (ENSAMEG00000014456) #18 ENSAMEG00000014434 #19 ENSAMEG00000014430 #20 ENSAMEG00000030040 #23 ENSAMEG00000023499 ENSAMEG00000014416 BPHL (ENSAMEG00000014392) #24 RIPK1 (ENSAMEG00000014389) #25 NQO2 (ENSAMEG00000014373) #27 ENSAMEG00000003548 #28 SERPINB9 (ENSAMEG00000003574) #29 SERPINB1 (ENSAMEG00000003580) #30 WRNIP1 (ENSAMEG00000027067) #31 ENSAMEG00000025653 MYLK4 (ENSAMEG00000010940) #33 GMDS (ENSAMEG00000010935) #34 ENSAMEG00000010931 #35 ENSAMEG00000025085 ENSAMEG00000025252 Ursus ANCESTRAL SPECIES 34 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b.x ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00390000008828 #13 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.b #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 ENSGT00390000010872 ENSGT00940000159059 Polar bear DUPLICATION Polar bear MODERN SPECIES 181 F13A1 (ENSUMAG00000018590) NRN1 (ENSUMAG00000018605) FARS2 (ENSUMAG00000018618) #8 LYRM4 (ENSUMAG00000018628) #9 RPP40 (ENSUMAG00000018639) #11 CDYL (ENSUMAG00000018648) #12 ENSUMAG00000018660 #13 ECI2 (ENSUMAG00000018673) #14 ENSUMAG00000018677 #15 FAM217A (ENSUMAG00000018684) #16 PRPF4B (ENSUMAG00000018696) #17 FAM50B (ENSUMAG00000018705) PXDC1 (ENSUMAG00000018711) #18 SLC22A23 (ENSUMAG00000018716) #19 PSMG4 (ENSUMAG00000018729) #20 ENSUMAG00000018733 #23 ENSUMAG00000018735 #23 ENSUMAG00000018737 ##23 BPHL (ENSUMAG00000018741) #24 RIPK1 (ENSUMAG00000018746) #25 NQO2 (ENSUMAG00000018754) #27 ENSUMAG00000018764 #28 SERPINB9 (ENSUMAG00000018772) #29 SERPINB1 (ENSUMAG00000018779) #30 WRNIP1 (ENSUMAG00000018782) #31 MYLK4 (ENSUMAG00000018791) #33 GMDS (ENSUMAG00000018823) #34 ENSUMAG00000018836 #35 ENSUMAG00000018847 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018902 Polar bear MODERN SPECIES 181 NRN1 (ENSUMAG00000018605) FARS2 (ENSUMAG00000018618) #8 LYRM4 (ENSUMAG00000018628) #9 RPP40 (ENSUMAG00000018639) #11 CDYL (ENSUMAG00000018648) #12 ENSUMAG00000018660 #13 ECI2 (ENSUMAG00000018673) #14 ENSUMAG00000018677 #15 FAM217A (ENSUMAG00000018684) #16 PRPF4B (ENSUMAG00000018696) #17 FAM50B (ENSUMAG00000018705) PXDC1 (ENSUMAG00000018711) #18 SLC22A23 (ENSUMAG00000018716) #19 PSMG4 (ENSUMAG00000018729) #20 ENSUMAG00000018733 #23 ENSUMAG00000018735 #23 ENSUMAG00000018737 ##23 BPHL (ENSUMAG00000018741) #24 RIPK1 (ENSUMAG00000018746) #25 NQO2 (ENSUMAG00000018754) #27 ENSUMAG00000018764 #28 SERPINB9 (ENSUMAG00000018772) #29 SERPINB1 (ENSUMAG00000018779) #30 WRNIP1 (ENSUMAG00000018782) #31 MYLK4 (ENSUMAG00000018791) #33 GMDS (ENSUMAG00000018823) #34 ENSUMAG00000018836 #35 ENSUMAG00000018847 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018902 IRF4 (ENSUMAG00000018906) American black bear DUPLICATION American black bear MODERN SPECIES 1147 SLC22A23 (ENSUAMG00000012637) #19 PSMG4 (ENSUAMG00000012633) #20 TUBB2B (ENSUAMG00000012630) #23 ENSUAMG00000012628 American black bear MODERN SPECIES 6712 ENSUAMG00000015412 #23 BPHL (ENSUAMG00000015404) #24 RIPK1 (ENSUAMG00000015400) #25 Mustelinae ANCESTRAL SPECIES 42 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00390000012138.a.b.t.bb.a.b ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 Ferret MODERN SPECIES 202 F13A1 (ENSMPUG00000000546) ENSMPUG00000000541 ENSMPUG00000000540 ENSMPUG00000000537 FARS2 (ENSMPUG00000000534) #8 LYRM4 (ENSMPUG00000000532) #9 RPP40 (ENSMPUG00000000530) #11 CDYL (ENSMPUG00000000521) #12 ECI2 (ENSMPUG00000000515) #14 ENSMPUG00000000507 #15 FAM217A (ENSMPUG00000000502) #16 PRPF4B (ENSMPUG00000000500) #17 FAM50B (ENSMPUG00000000493) PXDC1 (ENSMPUG00000000491) #18 SLC22A23 (ENSMPUG00000000466) #19 TUBB2B (ENSMPUG00000000462) #23 BPHL (ENSMPUG00000000459) #24 RIPK1 (ENSMPUG00000000454) #25 NQO2 (ENSMPUG00000000451) #27 ENSMPUG00000000448 #28 ENSMPUG00000000447 SERPINB9 (ENSMPUG00000000446) #29 SERPINB1 (ENSMPUG00000000421) #30 WRNIP1 (ENSMPUG00000000417) #31 MYLK4 (ENSMPUG00000000408) #33 ENSMPUG00000018450 GMDS (ENSMPUG00000000399) #34 FOXC1 (ENSMPUG00000018449) #35 FOXF2 (ENSMPUG00000000392) #36 FOXQ1 (ENSMPUG00000018966) #37 ENSMPUG00000000390 American mink MODERN SPECIES 158 FAM50B (ENSNVIG00000011720) ENSNVIG00000011710 PXDC1 (ENSNVIG00000011694) #18 SLC22A23 (ENSNVIG00000011656) #19 PSMG4 (ENSNVIG00000011643) #20 TUBB2B (ENSNVIG00000011631) #23 BPHL (ENSNVIG00000011595) #24 RIPK1 (ENSNVIG00000011579) #25 NQO2 (ENSNVIG00000011533) #27 ENSNVIG00000011489 #28 SERPINB9 (ENSNVIG00000011466) #29 ILEU (ENSNVIG00000011445) #30 WRNIP1 (ENSNVIG00000011416) #31 MYLK4 (ENSNVIG00000011396) #33 GMDS (ENSNVIG00000011372) #34 FOXC1 (ENSNVIG00000011358) #35 FOXF2 (ENSNVIG00000011356) #36 ENSNVIG00000011350 #37 ENSNVIG00000011347 EXOC2 (ENSNVIG00000011250) ENSNVIG00000011228 Canidae ANCESTRAL SPECIES 48 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 ENSGT00390000014654 ENSGT00940000163032 Red fox MODERN SPECIES 173 CDYL (ENSVVUG00000018989) #12 ECI2 (ENSVVUG00000019007) #14 ENSVVUG00000019015 #15 FAM217A (ENSVVUG00000019019) #16 PRPF4B (ENSVVUG00000019025) #17 ENSVVUG00000019034 PXDC1 (ENSVVUG00000019041) #18 SLC22A23 (ENSVVUG00000019044) #19 TUBB2B (ENSVVUG00000019054) #23 ENSVVUG00000019059 #24 ENSVVUG00000019060 #24 ENSVVUG00000019068 RIPK1 (ENSVVUG00000019070) #25 NQO2 (ENSVVUG00000019083) #27 ENSVVUG00000019088 #28 SERPINB9 (ENSVVUG00000019101) #29 SERPINB1 (ENSVVUG00000019110) #30 WRNIP1 (ENSVVUG00000019115) #31 MYLK4 (ENSVVUG00000019119) #33 RPLP2 (ENSVVUG00000019125) GMDS (ENSVVUG00000019130) #34 ENSVVUG00000019136 #35 ENSVVUG00000019144 ENSVVUG00000019147 Canis_lupus ANCESTRAL SPECIES 36 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00980000203340 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000003582.q.a.b.a.b.a.b ENSGT01020000230346.C.e.c.b ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00970000193590.b.c.b ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Dingo MODERN SPECIES 411 LYRM4 (ENSCAFG00020013362) #9 ENSCAFG00020013366 #10 RPP40 (ENSCAFG00020013380) #11 CDYL (ENSCAFG00020013382) #12 ENSCAFG00020013385 ECI2 (ENSCAFG00020013391) #14 ENSCAFG00020013395 #15 FAM217A (ENSCAFG00020013397) #16 PRPF4B (ENSCAFG00020013403) #17 ENSCAFG00020000097 ENSCAFG00020000116 ENSCAFG00020000131 ENSCAFG00020000138 #18 SLC22A23 (ENSCAFG00020000148) #19 ENSCAFG00020000376 #20 TUBB2B (ENSCAFG00020000389) #23 BPHL (ENSCAFG00020000419) #24 RIPK1 (ENSCAFG00020000428) #25 ENSCAFG00020000437 NQO2 (ENSCAFG00020000450) #27 ENSCAFG00020000462 #28 SERPINB9 (ENSCAFG00020000463) #29 SERPINB1 (ENSCAFG00020000473) #30 WRNIP1 (ENSCAFG00020000482) #31 MYLK4 (ENSCAFG00020000493) #33 GMDS (ENSCAFG00020000552) #34 ENSCAFG00020000565 #35 ENSCAFG00020000579 ENSCAFG00020000590 FOXF2 (ENSCAFG00020000598) #36 ENSCAFG00020000606 Dog MODERN SPECIES 28 FARS2 (ENSCAFG00845019317) #8 LYRM4 (ENSCAFG00845019185) #9 ENSCAFG00845019068 #10 RPP40 (ENSCAFG00845018947) #11 CDYL (ENSCAFG00845018889) #12 ENSCAFG00845018833 ECI2 (ENSCAFG00845018709) #14 ENSCAFG00845018634 #15 ENSCAFG00845018572 #16 PRPF4B (ENSCAFG00845018389) #17 ENSCAFG00845018330 ENSCAFG00845018280 ENSCAFG00845018193 #18 SLC22A23 (ENSCAFG00845017898) #19 PSMG4 (ENSCAFG00845017809) #20 TUBB2B (ENSCAFG00845017639) #23 BPHL (ENSCAFG00845017516) #24 ENSCAFG00845017474 RIPK1 (ENSCAFG00845017400) #25 NQO2 (ENSCAFG00845017337) #27 ENSCAFG00845017319 SERPINB6 (ENSCAFG00845017287) #28 SERPINB9 (ENSCAFG00845017203) #29 SERPINB1 (ENSCAFG00845017116) #30 WRNIP1 (ENSCAFG00845016996) #31 MYLK4 (ENSCAFG00845016887) #33 ENSCAFG00845016489 #34 ENSCAFG00845016313 #35 ENSCAFG00845016281 ENSCAFG00845016251 FOXF2 (ENSCAFG00845016185) #36 Laurasiatheria_c ANCESTRAL SPECIES 6 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Equus ANCESTRAL SPECIES 47 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT01000000214902 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Donkey DUPLICATION Donkey MODERN SPECIES 27 NRN1 (ENSEASG00005031623) FARS2 (ENSEASG00005012111) #8 ENSEASG00005012113 PPP1R3G (ENSEASG00005030057) #10 RPP40 (ENSEASG00005012116) #11 CDYL (ENSEASG00005012117) #12 ENSEASG00005032457 ECI2 (ENSEASG00005012124) #14 ENSEASG00005012126 #15 FAM217A (ENSEASG00005012129) #16 PRPF4B (ENSEASG00005012132) #17 FAM50B (ENSEASG00005012136) ENSEASG00005012139 #18 SLC22A23 (ENSEASG00005012146) #19 PSMG4 (ENSEASG00005012153) #20 TUBB2B (ENSEASG00005032707) #23 ENSEASG00005012165 TUBB2A (ENSEASG00005030900) #23 BPHL (ENSEASG00005012172) #24 RIPK1 (ENSEASG00005012175) #25 NQO2 (ENSEASG00005012177) #27 ENSEASG00005012179 #28 SERPINB9 (ENSEASG00005012183) #29 SERPINB1 (ENSEASG00005012189) #30 WRNIP1 (ENSEASG00005012190) #31 MYLK4 (ENSEASG00005012193) #33 GMDS (ENSEASG00005012197) #34 ENSEASG00005031584 #35 FOXF2 (ENSEASG00005012206) #36 EXOC2 (ENSEASG00005012215) IRF4 (ENSEASG00005012225) Donkey MODERN SPECIES 27 ENSEASG00005012113 PPP1R3G (ENSEASG00005030057) #10 RPP40 (ENSEASG00005012116) #11 CDYL (ENSEASG00005012117) #12 ENSEASG00005032457 ECI2 (ENSEASG00005012124) #14 ENSEASG00005012126 #15 FAM217A (ENSEASG00005012129) #16 PRPF4B (ENSEASG00005012132) #17 FAM50B (ENSEASG00005012136) ENSEASG00005012139 #18 SLC22A23 (ENSEASG00005012146) #19 PSMG4 (ENSEASG00005012153) #20 TUBB2B (ENSEASG00005032707) #23 ENSEASG00005012165 TUBB2A (ENSEASG00005030900) #23 BPHL (ENSEASG00005012172) #24 RIPK1 (ENSEASG00005012175) #25 NQO2 (ENSEASG00005012177) #27 ENSEASG00005012179 #28 SERPINB9 (ENSEASG00005012183) #29 SERPINB1 (ENSEASG00005012189) #30 WRNIP1 (ENSEASG00005012190) #31 MYLK4 (ENSEASG00005012193) #33 GMDS (ENSEASG00005012197) #34 ENSEASG00005031584 #35 FOXF2 (ENSEASG00005012206) #36 EXOC2 (ENSEASG00005012215) IRF4 (ENSEASG00005012225) ENSEASG00005012235 ENSEASG00005027632 Horse DUPLICATION Horse MODERN SPECIES 12 NRN1 (ENSECAG00000007120) FARS2 (ENSECAG00000000279) #8 ENSECAG00000050087 #9 RPP40 (ENSECAG00000017247) #11 CDYL (ENSECAG00000014044) #12 ENSECAG00000046549 ECI2 (ENSECAG00000000313) #14 ENSECAG00000000206 #15 FAM217A (ENSECAG00000000041) #16 PRPF4B (ENSECAG00000014830) #17 ENSECAG00000033231 FAM50B (ENSECAG00000014818) PXDC1 (ENSECAG00000014479) #18 SLC22A23 (ENSECAG00000013821) #19 ENSECAG00000013813 #20 TUBB2B (ENSECAG00000058458) #23 TUBB (ENSECAG00000020234) #23 BPHL (ENSECAG00000013049) #24 RIPK1 (ENSECAG00000010293) #25 NQO2 (ENSECAG00000008386) #27 SERPINB6 (ENSECAG00000015966) #28 SERPINB9 (ENSECAG00000012506) #29 SERPINB1 (ENSECAG00000009896) #30 WRNIP1 (ENSECAG00000008348) #31 MYLK4 (ENSECAG00000006224) #33 ENSECAG00000060133 GMDS (ENSECAG00000001999) #34 FOXC1 (ENSECAG00000029381) #35 FOXQ1 (ENSECAG00000034522) #37 ENSECAG00000046100 EXOC2 (ENSECAG00000000078) Horse MODERN SPECIES 12 FARS2 (ENSECAG00000000279) #8 ENSECAG00000050087 #9 RPP40 (ENSECAG00000017247) #11 CDYL (ENSECAG00000014044) #12 ENSECAG00000046549 ECI2 (ENSECAG00000000313) #14 ENSECAG00000000206 #15 FAM217A (ENSECAG00000000041) #16 PRPF4B (ENSECAG00000014830) #17 ENSECAG00000033231 FAM50B (ENSECAG00000014818) PXDC1 (ENSECAG00000014479) #18 SLC22A23 (ENSECAG00000013821) #19 ENSECAG00000013813 #20 TUBB2B (ENSECAG00000058458) #23 TUBB (ENSECAG00000020234) #23 BPHL (ENSECAG00000013049) #24 RIPK1 (ENSECAG00000010293) #25 NQO2 (ENSECAG00000008386) #27 SERPINB6 (ENSECAG00000015966) #28 SERPINB9 (ENSECAG00000012506) #29 SERPINB1 (ENSECAG00000009896) #30 WRNIP1 (ENSECAG00000008348) #31 MYLK4 (ENSECAG00000006224) #33 ENSECAG00000060133 GMDS (ENSECAG00000001999) #34 FOXC1 (ENSECAG00000029381) #35 FOXQ1 (ENSECAG00000034522) #37 ENSECAG00000046100 EXOC2 (ENSECAG00000000078) IRF4 (ENSECAG00000016808) Chiroptera ANCESTRAL SPECIES 50 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154931 #29 ENSGT00940000154519 #28 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Megabat DUPLICATION Megabat MODERN SPECIES 783 PSMG4 (ENSPVAG00000013677) #20 TUBB2B (ENSPVAG00000013676) #23 Megabat MODERN SPECIES 782 TUBB2A (ENSPVAG00000003354) #23 BPHL (ENSPVAG00000003353) #24 RIPK1 (ENSPVAG00000003352) #25 Microchiroptera ANCESTRAL SPECIES 1 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154573 #30 ENSGT00940000154931 #29 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Greater horseshoe bat MODERN SPECIES 27 FARS2 (ENSRFEG00010000859) #8 LYRM4 (ENSRFEG00010000898) #9 ENSRFEG00010000919 PPP1R3G (ENSRFEG00010000932) #10 RPP40 (ENSRFEG00010000963) #11 CDYL (ENSRFEG00010001012) #12 ECI2 (ENSRFEG00010001054) #14 ENSRFEG00010001108 #15 FAM217A (ENSRFEG00010001133) #16 PRPF4B (ENSRFEG00010001165) #17 ENSRFEG00010001206 FAM50B (ENSRFEG00010001229) PXDC1 (ENSRFEG00010001243) #18 SLC22A23 (ENSRFEG00010001273) #19 PSMG4 (ENSRFEG00010001338) #20 TUBB2B (ENSRFEG00010001382) #23 BPHL (ENSRFEG00010001423) #24 RIPK1 (ENSRFEG00010001467) #25 ENSRFEG00010001506 NQO2 (ENSRFEG00010001518) #27 ENSRFEG00010001556 #29 ENSRFEG00010001648 #29 ENSRFEG00010001710 #28 SERPINB1 (ENSRFEG00010001747) #30 ENSRFEG00010001768 WRNIP1 (ENSRFEG00010001786) #31 MYLK4 (ENSRFEG00010001828) #33 GMDS (ENSRFEG00010001869) #34 NACA2 (ENSRFEG00010001919) ENSRFEG00010001928 #35 ENSRFEG00010001950 Microbat DUPLICATION Microbat MODERN SPECIES 958 ENSMLUG00000025590 PXDC1 (ENSMLUG00000011359) #18 ENSMLUG00000028399 ENSMLUG00000006824 #19 PSMG4 (ENSMLUG00000024906) #20 TUBB2B (ENSMLUG00000006805) #23 ENSMLUG00000016179 #23 BPHL (ENSMLUG00000016171) #24 RIPK1 (ENSMLUG00000016163) #25 NQO2 (ENSMLUG00000000386) #27 ENSMLUG00000008803 #28 ENSMLUG00000016863 #30 ENSMLUG00000016842 #30 ENSMLUG00000016858 #30 ENSMLUG00000016847 #30 ENSMLUG00000016839 #30 WRNIP1 (ENSMLUG00000011209) #31 MYLK4 (ENSMLUG00000011182) #33 ENSMLUG00000003910 GMDS (ENSMLUG00000003934) #34 ENSMLUG00000023644 FOXF2 (ENSMLUG00000030088) #36 Microbat MODERN SPECIES 958 ENSMLUG00000025590 PXDC1 (ENSMLUG00000011359) #18 ENSMLUG00000028399 ENSMLUG00000006824 #19 PSMG4 (ENSMLUG00000024906) #20 TUBB2B (ENSMLUG00000006805) #23 ENSMLUG00000016179 #23 BPHL (ENSMLUG00000016171) #24 RIPK1 (ENSMLUG00000016163) #25 NQO2 (ENSMLUG00000000386) #27 ENSMLUG00000008803 #28 ENSMLUG00000016863 #30 ENSMLUG00000016842 #30 ENSMLUG00000016858 #30 ENSMLUG00000016847 #30 ENSMLUG00000016839 #30 WRNIP1 (ENSMLUG00000011209) #31 MYLK4 (ENSMLUG00000011182) #33 ENSMLUG00000003910 GMDS (ENSMLUG00000003934) #34 ENSMLUG00000023644 Artiodactyla DUPLICATION Artiodactyla DUPLICATION Artiodactyla ANCESTRAL SPECIES 15 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.s.a #23 ENSGT00940000167417.a #21 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 Artiodactyla_a ANCESTRAL SPECIES 27 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 ENSGT00940000159059 Pecora ANCESTRAL SPECIES 32 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 ENSGT00940000159059 Percora_a ANCESTRAL SPECIES 12 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.f.a.b.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 Bovidae ANCESTRAL SPECIES 13 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.f.a.b.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 Bovinae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #23 American bison MODERN SPECIES 2738 ENSBBBG00000001144 #14 ENSBBBG00000001114 #15 FAM217A (ENSBBBG00000001094) #16 PRPF4B (ENSBBBG00000001052) #17 ENSBBBG00000000979 #19 ENSBBBG00000000939 #20 ENSBBBG00000000913 #23 Bos ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #23 Bos_a ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #23 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #19 ENSBMUG00000009939 #23 ENSBMUG00000009950 #23 ENSBMUG00000009966 #23 BPHL (ENSBMUG00000009972) #24 RIPK1 (ENSBMUG00000009980) #25 NQO2 (ENSBMUG00000010004) #27 ENSBMUG00000010067 #28 Camelidae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.a #23 Alpaca MODERN SPECIES 2132 ENSVPAG00000001566 #23 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.s.a #23 ENSGT00940000167417.a #21 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Suina ANCESTRAL SPECIES 8 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a.b #21 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 Pig MODERN SPECIES 15 LY86 (ENSSSCG00000032355) F13A1 (ENSSSCG00000024310) NRN1 (ENSSSCG00000026211) FARS2 (ENSSSCG00000038717) #8 LYRM4 (ENSSSCG00000031269) #9 PPP1R3G (ENSSSCG00000000997) #10 RPP40 (ENSSSCG00000000998) #11 CDYL (ENSSSCG00000000999) #12 ECI2 (ENSSSCG00000001000) #14 ENSSSCG00000001001 #15 PRPF4B (ENSSSCG00000001002) #17 FAM50B (ENSSSCG00000026323) PXDC1 (ENSSSCG00000025582) #18 SLC22A23 (ENSSSCG00000001004) #19 ENSSSCG00000036988 #21 TUBB2B (ENSSSCG00000033655) #23 TUBB2A (ENSSSCG00000062050) #23 BPHL (ENSSSCG00000001008) #24 RIPK1 (ENSSSCG00000001009) #25 NQO2 (ENSSSCG00000020758) #27 ENSSSCG00000038404 #28 SERPINB9 (ENSSSCG00000031615) #29 SERPINB1 (ENSSSCG00000001011) #30 WRNIP1 (ENSSSCG00000001010) #31 ENSSSCG00000028777 #33 FOXC1 (ENSSSCG00000039756) #35 GMDS (ENSSSCG00000000994) #34 FOXF2 (ENSSSCG00000037195) #36 FOXQ1 (ENSSSCG00000000991) #37 ENSSSCG00000059227 ENSSSCG00000041494 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Pecora ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Percora_a ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Bovidae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Bovinae ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Bos ANCESTRAL SPECIES ENSGT00940000154150.xb.s.b #23 Bos_a ANCESTRAL SPECIES 49 ENSGT00950000185466 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.e.b.b.b.a #28 ENSGT00940000154519.e.b.b.a.c #28 ENSGT00940000154519.e.a.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #19 ENSBMUG00000009939 #23 ENSBMUG00000009950 #23 ENSBMUG00000009966 #23 BPHL (ENSBMUG00000009972) #24 RIPK1 (ENSBMUG00000009980) #25 NQO2 (ENSBMUG00000010004) #27 ENSBMUG00000010067 #28 Artiodactyla ANCESTRAL SPECIES 15 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.s.a #23 ENSGT00940000167417.a #21 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 Artiodactyla_a ANCESTRAL SPECIES 27 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Camelidae ANCESTRAL SPECIES 54 ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Arabian camel MODERN SPECIES 12 LY86 (ENSCDRG00005009098) F13A1 (ENSCDRG00005009013) ENSCDRG00005008875 FARS2 (ENSCDRG00005008824) #8 LYRM4 (ENSCDRG00005016295) #9 RPP40 (ENSCDRG00005015971) #11 CDYL (ENSCDRG00005015913) #12 ENSCDRG00005015881 ECI2 (ENSCDRG00005015840) #14 ENSCDRG00005015800 #15 FAM217A (ENSCDRG00005015744) #16 PRPF4B (ENSCDRG00005015684) #17 PXDC1 (ENSCDRG00005015617) #18 SLC22A23 (ENSCDRG00005015543) #19 ENSCDRG00005015514 #20 TUBB2B (ENSCDRG00005015474) #23 BPHL (ENSCDRG00005015385) #24 RIPK1 (ENSCDRG00005015351) #25 NQO2 (ENSCDRG00005015309) #27 ENSCDRG00005015210 #28 SERPINB9 (ENSCDRG00005015109) #29 SERPINB1 (ENSCDRG00005015041) #30 WRNIP1 (ENSCDRG00005014977) #31 MYLK4 (ENSCDRG00005014815) #33 ENSCDRG00005014762 GMDS (ENSCDRG00005014630) #34 EXOC2 (ENSCDRG00005013918) IRF4 (ENSCDRG00005013862) ENSCDRG00005013769 Artiodactyla_b ANCESTRAL SPECIES 15 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 Cetacea ANCESTRAL SPECIES 7 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.c #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT01000000221719 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 Blue whale MODERN SPECIES 2 F13A1 (ENSBMSG00010007558) NRN1 (ENSBMSG00010007552) FARS2 (ENSBMSG00010007535) #8 LYRM4 (ENSBMSG00010007512) #9 PPP1R3G (ENSBMSG00010007505) #10 RPP40 (ENSBMSG00010007489) #11 CDYL (ENSBMSG00010007473) #12 ECI2 (ENSBMSG00010007466) #14 ENSBMSG00010007461 ENSBMSG00010007453 #15 FAM217A (ENSBMSG00010007442) #16 PRPF4B (ENSBMSG00010007428) #17 PXDC1 (ENSBMSG00010007412) #18 SLC22A23 (ENSBMSG00010007297) #19 PSMG4 (ENSBMSG00010007269) #20 TUBB2A (ENSBMSG00010007239) #23 BPHL (ENSBMSG00010007209) #24 RIPK1 (ENSBMSG00010007199) #25 NQO2 (ENSBMSG00010007187) #27 ENSBMSG00010007165 #28 SERPINB9 (ENSBMSG00010007151) #29 SERPINB1 (ENSBMSG00010007136) #30 WRNIP1 (ENSBMSG00010007123) #31 MYLK4 (ENSBMSG00010007088) #33 ENSBMSG00010007069 GMDS (ENSBMSG00010007043) #34 FOXC1 (ENSBMSG00010007030) #35 FOXF2 (ENSBMSG00010007027) #36 FOXQ1 (ENSBMSG00010007017) #37 EXOC2 (ENSBMSG00010006978) IRF4 (ENSBMSG00010006934) Odontoceti ANCESTRAL SPECIES 5 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.c #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT01000000221719 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 9 LY86 (ENSPCTG00005008221) F13A1 (ENSPCTG00005008252) NRN1 (ENSPCTG00005008319) ENSPCTG00005008355 FARS2 (ENSPCTG00005008380) #8 LYRM4 (ENSPCTG00005008407) #9 PPP1R3G (ENSPCTG00005008426) #10 RPP40 (ENSPCTG00005008452) #11 ENSPCTG00005008550 #12 ECI2 (ENSPCTG00005008598) #14 ENSPCTG00005008657 #15 FAM217A (ENSPCTG00005008731) #16 PRPF4B (ENSPCTG00005008801) #17 PXDC1 (ENSPCTG00005008936) #18 TUBB2A (ENSPCTG00005008977) #23 TUBB2A (ENSPCTG00005009021) #23 BPHL (ENSPCTG00005009057) #24 RIPK1 (ENSPCTG00005009207) #25 NQO2 (ENSPCTG00005009321) #27 ENSPCTG00005009401 #28 SERPINB9 (ENSPCTG00005009506) #29 ENSPCTG00005009581 #30 WRNIP1 (ENSPCTG00005009615) #31 MYLK4 (ENSPCTG00005009809) #33 ENSPCTG00005010105 GMDS (ENSPCTG00005010205) #34 ENSPCTG00005010376 #35 FOXF2 (ENSPCTG00005010432) #36 EXOC2 (ENSPCTG00005010489) IRF4 (ENSPCTG00005010577) DUSP22 (ENSPCTG00005010689) Sperm whale MODERN SPECIES 9 DSP (ENSPCTG00005007793) LY86 (ENSPCTG00005008221) F13A1 (ENSPCTG00005008252) NRN1 (ENSPCTG00005008319) ENSPCTG00005008355 FARS2 (ENSPCTG00005008380) #8 LYRM4 (ENSPCTG00005008407) #9 PPP1R3G (ENSPCTG00005008426) #10 RPP40 (ENSPCTG00005008452) #11 ENSPCTG00005008550 #12 ECI2 (ENSPCTG00005008598) #14 ENSPCTG00005008657 #15 FAM217A (ENSPCTG00005008731) #16 PRPF4B (ENSPCTG00005008801) #17 PXDC1 (ENSPCTG00005008936) #18 TUBB2A (ENSPCTG00005008977) #23 TUBB2A (ENSPCTG00005009021) #23 BPHL (ENSPCTG00005009057) #24 RIPK1 (ENSPCTG00005009207) #25 NQO2 (ENSPCTG00005009321) #27 ENSPCTG00005009401 #28 SERPINB9 (ENSPCTG00005009506) #29 ENSPCTG00005009581 #30 WRNIP1 (ENSPCTG00005009615) #31 MYLK4 (ENSPCTG00005009809) #33 ENSPCTG00005010105 GMDS (ENSPCTG00005010205) #34 ENSPCTG00005010376 #35 FOXF2 (ENSPCTG00005010432) #36 EXOC2 (ENSPCTG00005010489) IRF4 (ENSPCTG00005010577) Odontoceti_a ANCESTRAL SPECIES 5 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u.a #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.c #28 ENSGT00940000154573.u #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT01000000221719 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Odontoceti_b ANCESTRAL SPECIES 6 ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u.a #12 ENSGT00940000155105 #14 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.c #28 ENSGT00940000154573.u #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT01000000221719 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Monodontidae ANCESTRAL SPECIES 4 ENSGT00400000022103.a ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106.u.a #12 ENSGT00940000155105 #14 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.c #28 ENSGT00390000008538 #31 ENSGT01010000230145 ENSGT00940000156211.b #33 ENSGT01000000221719 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00390000010872 ENSGT00940000159059 ENSGT00940000157153 Narwhal MODERN SPECIES 310 RREB1 (ENSMMNG00015010935) LY86 (ENSMMNG00015010924) F13A1 (ENSMMNG00015010895) NRN1 (ENSMMNG00015010879) ENSMMNG00015010864 FARS2 (ENSMMNG00015010823) #8 ENSMMNG00015010792 #9 PPP1R3G (ENSMMNG00015010783) #10 RPP40 (ENSMMNG00015010735) #11 ENSMMNG00015010684 #12 ECI2 (ENSMMNG00015010653) #14 PRPF4B (ENSMMNG00015010640) #17 PXDC1 (ENSMMNG00015010618) #18 SLC22A23 (ENSMMNG00015010564) #19 PSMG4 (ENSMMNG00015010506) #20 TUBB2B (ENSMMNG00015010464) #23 BPHL (ENSMMNG00015010397) #24 RIPK1 (ENSMMNG00015010383) #25 NQO2 (ENSMMNG00015010357) #27 ENSMMNG00015010309 #28 WRNIP1 (ENSMMNG00015010266) #31 ENSMMNG00015010243 MYLK4 (ENSMMNG00015010218) #33 ENSMMNG00015010189 GMDS (ENSMMNG00015014105) #34 FOXC1 (ENSMMNG00015014093) #35 FOXF2 (ENSMMNG00015014085) #36 EXOC2 (ENSMMNG00015014030) IRF4 (ENSMMNG00015014004) DUSP22 (ENSMMNG00015013987) VAMP7 (ENSMMNG00015013948) Beluga whale MODERN SPECIES 10 RREB1 (ENSDLEG00000001663) LY86 (ENSDLEG00000001638) F13A1 (ENSDLEG00000001613) NRN1 (ENSDLEG00000001599) FARS2 (ENSDLEG00000001576) #8 ENSDLEG00000001554 LYRM4 (ENSDLEG00000001535) #9 PPP1R3G (ENSDLEG00000001526) #10 RPP40 (ENSDLEG00000001512) #11 ENSDLEG00000001490 #12 ECI2 (ENSDLEG00000001462) #14 PRPF4B (ENSDLEG00000001431) #17 ENSDLEG00000001426 #18 SLC22A23 (ENSDLEG00000001395) #19 PSMG4 (ENSDLEG00000001383) #20 TUBB2A (ENSDLEG00000001358) #23 BPHL (ENSDLEG00000001285) #24 RIPK1 (ENSDLEG00000001254) #25 NQO2 (ENSDLEG00000001236) #27 ENSDLEG00000001211 #28 WRNIP1 (ENSDLEG00000001184) #31 ENSDLEG00000001175 ENSDLEG00000001169 GMDS (ENSDLEG00000001155) #34 FOXC1 (ENSDLEG00000001148) #35 FOXF2 (ENSDLEG00000001139) #36 ENSDLEG00000001130 EXOC2 (ENSDLEG00000000911) IRF4 (ENSDLEG00000000806) ENSDLEG00000000793 ENSDLEG00000000776 Vaquita MODERN SPECIES 2 RREB1 (ENSPSNG00000014036) LY86 (ENSPSNG00000014090) F13A1 (ENSPSNG00000014208) NRN1 (ENSPSNG00000014328) FARS2 (ENSPSNG00000014384) #8 LYRM4 (ENSPSNG00000014436) #9 PPP1R3G (ENSPSNG00000014484) #10 RPP40 (ENSPSNG00000014549) #11 ENSPSNG00000014779 #12 ECI2 (ENSPSNG00000014875) #14 FAM217A (ENSPSNG00000014949) #16 PRPF4B (ENSPSNG00000015086) #17 PXDC1 (ENSPSNG00000015171) #18 SLC22A23 (ENSPSNG00000015233) #19 PSMG4 (ENSPSNG00000015357) #20 TUBB2A (ENSPSNG00000015438) #23 BPHL (ENSPSNG00000015565) #24 RIPK1 (ENSPSNG00000015681) #25 NQO2 (ENSPSNG00000015747) #27 ENSPSNG00000015836 #28 SERPINB1 (ENSPSNG00000015980) #30 WRNIP1 (ENSPSNG00000016040) #31 MYLK4 (ENSPSNG00000016111) #33 ENSPSNG00000016357 GMDS (ENSPSNG00000016429) #34 ENSPSNG00000016521 #35 FOXF2 (ENSPSNG00000016588) #36 FOXQ1 (ENSPSNG00000016632) #37 EXOC2 (ENSPSNG00000016671) IRF4 (ENSPSNG00000016722) DUSP22 (ENSPSNG00000016848) Dolphin DUPLICATION Dolphin MODERN SPECIES 161 PSMG4 (ENSTTRG00000006146) #20 TUBB2B (ENSTTRG00000006144) #23 ENSTTRG00000006142 #23 BPHL (ENSTTRG00000006140) #24 ENSTTRG00000006137 #25 NQO2 (ENSTTRG00000006128) #27 Dolphin MODERN SPECIES 161 PSMG4 (ENSTTRG00000006146) #20 TUBB2B (ENSTTRG00000006144) #23 ENSTTRG00000006142 #23 BPHL (ENSTTRG00000006140) #24 ENSTTRG00000006137 #25 NQO2 (ENSTTRG00000006128) #27 Pecora ANCESTRAL SPECIES 32 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 Yarkand deer MODERN SPECIES 30 LY86 (ENSCHYG00000001035) F13A1 (ENSCHYG00000001064) NRN1 (ENSCHYG00000001106) FARS2 (ENSCHYG00000001148) #8 ENSCHYG00000001244 #9 PPP1R3G (ENSCHYG00000001273) #10 RPP40 (ENSCHYG00000001289) #11 CDYL (ENSCHYG00000001347) #12 ECI2 (ENSCHYG00000001423) #14 ENSCHYG00000001482 #15 FAM217A (ENSCHYG00000001494) #16 PRPF4B (ENSCHYG00000001509) #17 SLC22A23 (ENSCHYG00000001566) #19 PSMG4 (ENSCHYG00000001621) #20 ENSCHYG00000001640 TUBB2B (ENSCHYG00000001657) #23 BPHL (ENSCHYG00000001696) #24 RIPK1 (ENSCHYG00000001750) #25 DUSP22 (ENSCHYG00000001773) IRF4 (ENSCHYG00000001815) EXOC2 (ENSCHYG00000001849) FOXF2 (ENSCHYG00000001915) #36 GMDS (ENSCHYG00000001942) #34 WRNIP1 (ENSCHYG00000001991) #31 SERPINB1 (ENSCHYG00000002011) #30 SERPINB9 (ENSCHYG00000002035) #29 Percora_a ANCESTRAL SPECIES 12 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.f.a.b.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Siberian musk deer MODERN SPECIES 96 NRN1 (ENSMMSG00000019951) FARS2 (ENSMMSG00000019967) #8 ENSMMSG00000019992 ENSMMSG00000020008 ENSMMSG00000020020 #9 PPP1R3G (ENSMMSG00000020040) #10 RPP40 (ENSMMSG00000020056) #11 CDYL (ENSMMSG00000020126) #12 ECI2 (ENSMMSG00000020168) #14 ENSMMSG00000020286 #15 FAM217A (ENSMMSG00000000080) #16 PRPF4B (ENSMMSG00000000148) #17 PXDC1 (ENSMMSG00000000205) #18 SLC22A23 (ENSMMSG00000000252) #19 PSMG4 (ENSMMSG00000000373) #20 TUBB2B (ENSMMSG00000000409) #23 BPHL (ENSMMSG00000000460) #24 RIPK1 (ENSMMSG00000000490) #25 NQO2 (ENSMMSG00000000521) #27 ENSMMSG00000000568 #28 ENSMMSG00000000678 #28 ENSMMSG00000001423 #28 ENSMMSG00000001460 #28 ENSMMSG00000001478 #28 ENSMMSG00000001505 #28 SERPINB9 (ENSMMSG00000001536) #29 SERPINB1 (ENSMMSG00000001564) #30 WRNIP1 (ENSMMSG00000001591) #31 MYLK4 (ENSMMSG00000001649) #33 GMDS (ENSMMSG00000001775) #34 FOXC1 (ENSMMSG00000001806) #35 Bovidae ANCESTRAL SPECIES 13 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00940000154150.xb.s.a #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.f.a.b.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Bovinae ANCESTRAL SPECIES 9 ENSGT00940000157533 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.e.b.b.a #28 ENSGT00940000154519.e.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 Bos ANCESTRAL SPECIES 37 ENSGT00950000185466 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.e.b.b.b.a #28 ENSGT00940000154519.e.b.b.a.c #28 ENSGT00940000154519.e.a.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Bos_a ANCESTRAL SPECIES 49 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.e.b.b.b.a #28 ENSGT00940000154519.e.b.b.a.c #28 ENSGT00940000154519.e.a.a #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 Domestic yak MODERN SPECIES 16 ENSBGRG00000007376 ENSBGRG00000007447 #9 SDCBP (ENSBGRG00000007518) PPP1R3G (ENSBGRG00000007602) #10 ENSBGRG00000007618 RPP40 (ENSBGRG00000007644) #11 CDYL (ENSBGRG00000007875) #12 ECI2 (ENSBGRG00000007960) #14 ENSBGRG00000008092 #15 FAM217A (ENSBGRG00000008153) #16 PRPF4B (ENSBGRG00000008304) #17 PXDC1 (ENSBGRG00000008589) #18 ENSBGRG00000008631 SLC22A23 (ENSBGRG00000008663) #19 ENSBGRG00000008779 #20 TUBB2A (ENSBGRG00000008862) #23 BPHL (ENSBGRG00000008956) #24 RIPK1 (ENSBGRG00000009042) #25 NQO2 (ENSBGRG00000009131) #27 ENSBGRG00000009235 #28 ENSBGRG00000009283 #28 ENSBGRG00000009409 #28 ENSBGRG00000010125 #28 SERPINB9 (ENSBGRG00000010171) #29 SERPINB1 (ENSBGRG00000010205) #30 WRNIP1 (ENSBGRG00000010299) #31 MYLK4 (ENSBGRG00000010518) #33 GMDS (ENSBGRG00000011025) #34 FOXC1 (ENSBGRG00000011734) #35 FOXF2 (ENSBGRG00000011788) #36 ENSBGRG00000011879 #37 Wild yak MODERN SPECIES 2027 ENSBMUG00000009912 #19 ENSBMUG00000009939 #23 ENSBMUG00000009950 #23 ENSBMUG00000009966 #23 BPHL (ENSBMUG00000009972) #24 RIPK1 (ENSBMUG00000009980) #25 NQO2 (ENSBMUG00000010004) #27 ENSBMUG00000010067 #28 Bos_b ANCESTRAL SPECIES 8 ENSGT00950000185466 ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000154502.o.b ENSGT00940000163747 #10 ENSGT01100000263480.a.a.b.b.b.a.a.b.a.a.b.a.b.a.b ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.e.b.b.b.a #28 ENSGT00940000154519.e.b.b.a.c #28 ENSGT00940000154519.e.a.a #28 ENSGT00940000154519.e.a.b #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 Cow DUPLICATION Cow MODERN SPECIES 15 ENSBTAG00000049778 FARS2 (ENSBTAG00000018072) #8 LYRM4 (ENSBTAG00000031432) #9 ENSBTAG00000018309 PPP1R3G (ENSBTAG00000054777) #10 ENSBTAG00000051366 RPP40 (ENSBTAG00000003332) #11 CDYL (ENSBTAG00000016397) #12 ECI2 (ENSBTAG00000015178) #14 ENSBTAG00000015176 #15 FAM217A (ENSBTAG00000002089) #16 PRPF4B (ENSBTAG00000002086) #17 PXDC1 (ENSBTAG00000026919) #18 SLC22A23 (ENSBTAG00000010943) #19 PSMG4 (ENSBTAG00000031249) #20 TUBB2B (ENSBTAG00000054330) #23 TUBB2A (ENSBTAG00000048485) #23 BPHL (ENSBTAG00000006379) #24 RIPK1 (ENSBTAG00000006378) #25 ENSBTAG00000051842 NQO2 (ENSBTAG00000000786) #27 ENSBTAG00000049906 #28 ENSBTAG00000053741 #28 ENSBTAG00000054098 #28 SERPINB6 (ENSBTAG00000050155) #28 ENSBTAG00000053511 #28 SERPINB9 (ENSBTAG00000031267) #29 SERPINB1 (ENSBTAG00000011975) #30 WRNIP1 (ENSBTAG00000006166) #31 MYLK4 (ENSBTAG00000012079) #33 GMDS (ENSBTAG00000012058) #34 Cow MODERN SPECIES 15 FARS2 (ENSBTAG00000018072) #8 LYRM4 (ENSBTAG00000031432) #9 ENSBTAG00000018309 PPP1R3G (ENSBTAG00000054777) #10 ENSBTAG00000051366 RPP40 (ENSBTAG00000003332) #11 CDYL (ENSBTAG00000016397) #12 ECI2 (ENSBTAG00000015178) #14 ENSBTAG00000015176 #15 FAM217A (ENSBTAG00000002089) #16 PRPF4B (ENSBTAG00000002086) #17 PXDC1 (ENSBTAG00000026919) #18 SLC22A23 (ENSBTAG00000010943) #19 PSMG4 (ENSBTAG00000031249) #20 TUBB2B (ENSBTAG00000054330) #23 TUBB2A (ENSBTAG00000048485) #23 BPHL (ENSBTAG00000006379) #24 RIPK1 (ENSBTAG00000006378) #25 ENSBTAG00000051842 NQO2 (ENSBTAG00000000786) #27 ENSBTAG00000049906 #28 ENSBTAG00000053741 #28 ENSBTAG00000054098 #28 SERPINB6 (ENSBTAG00000050155) #28 ENSBTAG00000053511 #28 SERPINB9 (ENSBTAG00000031267) #29 SERPINB1 (ENSBTAG00000011975) #30 WRNIP1 (ENSBTAG00000006166) #31 MYLK4 (ENSBTAG00000012079) #33 GMDS (ENSBTAG00000012058) #34 ENSBTAG00000050875 #35 Hybrid Bos Indicus DUPLICATION Hybrid Bos Indicus MODERN SPECIES 15 LYRM4 (ENSBIXG00005026120) #9 ENSBIXG00005006186 PPP1R3G (ENSBIXG00005026071) #10 ENSBIXG00005026061 RPP40 (ENSBIXG00005026040) #11 CDYL (ENSBIXG00005004428) #12 ENSBIXG00005007197 ENSBIXG00005025934 ECI2 (ENSBIXG00005025904) #14 ENSBIXG00005025813 #15 FAM217A (ENSBIXG00005025792) #16 PRPF4B (ENSBIXG00005025750) #17 PXDC1 (ENSBIXG00005025631) #18 SLC22A23 (ENSBIXG00005004357) #19 PSMG4 (ENSBIXG00005025413) #20 TUBB2A (ENSBIXG00005025393) #23 ENSBIXG00005025336 #23 BPHL (ENSBIXG00005025316) #24 RIPK1 (ENSBIXG00005004294) #25 ENSBIXG00005025217 NQO2 (ENSBIXG00005025196) #27 ENSBIXG00005025063 #28 ENSBIXG00005024949 ENSBIXG00005024919 #28 SERPINB9 (ENSBIXG00005024704) #29 SERPINB1 (ENSBIXG00005024645) #30 WRNIP1 (ENSBIXG00005006680) #31 MYLK4 (ENSBIXG00005024549) #33 GMDS (ENSBIXG00005024373) #34 FOXF2 (ENSBIXG00005024208) #36 FOXQ1 (ENSBIXG00005024190) #37 Hybrid Bos Indicus MODERN SPECIES 15 ENSBIXG00005006186 PPP1R3G (ENSBIXG00005026071) #10 ENSBIXG00005026061 RPP40 (ENSBIXG00005026040) #11 CDYL (ENSBIXG00005004428) #12 ENSBIXG00005007197 ENSBIXG00005025934 ECI2 (ENSBIXG00005025904) #14 ENSBIXG00005025813 #15 FAM217A (ENSBIXG00005025792) #16 PRPF4B (ENSBIXG00005025750) #17 PXDC1 (ENSBIXG00005025631) #18 SLC22A23 (ENSBIXG00005004357) #19 PSMG4 (ENSBIXG00005025413) #20 TUBB2A (ENSBIXG00005025393) #23 ENSBIXG00005025336 #23 BPHL (ENSBIXG00005025316) #24 RIPK1 (ENSBIXG00005004294) #25 ENSBIXG00005025217 NQO2 (ENSBIXG00005025196) #27 ENSBIXG00005025063 #28 ENSBIXG00005024949 ENSBIXG00005024919 #28 SERPINB9 (ENSBIXG00005024704) #29 SERPINB1 (ENSBIXG00005024645) #30 WRNIP1 (ENSBIXG00005006680) #31 MYLK4 (ENSBIXG00005024549) #33 GMDS (ENSBIXG00005024373) #34 FOXF2 (ENSBIXG00005024208) #36 FOXQ1 (ENSBIXG00005024190) #37 EXOC2 (ENSBIXG00005002582) Caprinae ANCESTRAL SPECIES 41 ENSGT00390000018605 ENSGT01050000244939.a.a.a ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000154150.xb.t #23 ENSGT00940000175246 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519.e.b.a #28 ENSGT00940000154519.f.a.a.a.b #28 ENSGT00940000154931 #29 ENSGT00940000154519.f.a.a.a.a.a #28 ENSGT00940000154519.f.a.b.a #28 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 Rambouillet Sheep DUPLICATION Rambouillet Sheep MODERN SPECIES 12 RREB1 (ENSOARG00020025006) LY86 (ENSOARG00020025014) F13A1 (ENSOARG00020025035) NRN1 (ENSOARG00020025044) FARS2 (ENSOARG00020025055) #8 LYRM4 (ENSOARG00020025075) #9 PPP1R3G (ENSOARG00020025083) #10 RPP40 (ENSOARG00020025115) #11 CDYL (ENSOARG00020025174) #12 ENSOARG00020025197 #15 PRPF4B (ENSOARG00020025239) #17 ENSOARG00020025307 #18 SLC22A23 (ENSOARG00020006359) #19 TUBB2A (ENSOARG00020006431) #23 PSMG4 (ENSOARG00020006491) #20 TUBB2B (ENSOARG00020006539) #23 ENSOARG00020006586 RIPK1 (ENSOARG00020006661) #24 RIPK1 (ENSOARG00020006711) #25 ENSOARG00020006784 #27 ENSOARG00020006863 #28 ENSOARG00020007031 #28 ENSOARG00020008292 ENSOARG00020008345 #28 ENSOARG00020008440 #28 SERPINB9 (ENSOARG00020008599) #29 ENSOARG00020008634 #28 SERPINB1 (ENSOARG00020008679) #30 WRNIP1 (ENSOARG00020008718) #31 ENSOARG00020008839 #33 ENSOARG00020009120 Rambouillet Sheep MODERN SPECIES 12 SSR1 (ENSOARG00020024975) ENSOARG00020024996 RREB1 (ENSOARG00020025006) LY86 (ENSOARG00020025014) F13A1 (ENSOARG00020025035) NRN1 (ENSOARG00020025044) FARS2 (ENSOARG00020025055) #8 LYRM4 (ENSOARG00020025075) #9 PPP1R3G (ENSOARG00020025083) #10 RPP40 (ENSOARG00020025115) #11 CDYL (ENSOARG00020025174) #12 ENSOARG00020025197 #15 PRPF4B (ENSOARG00020025239) #17 ENSOARG00020025307 #18 SLC22A23 (ENSOARG00020006359) #19 TUBB2A (ENSOARG00020006431) #23 PSMG4 (ENSOARG00020006491) #20 TUBB2B (ENSOARG00020006539) #23 ENSOARG00020006586 RIPK1 (ENSOARG00020006661) #24 RIPK1 (ENSOARG00020006711) #25 ENSOARG00020006784 #27 ENSOARG00020006863 #28 ENSOARG00020007031 #28 ENSOARG00020008292 ENSOARG00020008345 #28 ENSOARG00020008440 #28 SERPINB9 (ENSOARG00020008599) #29 ENSOARG00020008634 #28 SERPINB1 (ENSOARG00020008679) #30 WRNIP1 (ENSOARG00020008718) #31 Goat DUPLICATION Goat MODERN SPECIES 15 NRN1 (ENSCHIG00000023169) ENSCHIG00000017222 FARS2 (ENSCHIG00000017678) #8 LYRM4 (ENSCHIG00000010740) #9 PPP1R3G (ENSCHIG00000017990) #10 ENSCHIG00000022246 RPP40 (ENSCHIG00000016849) #11 CDYL (ENSCHIG00000021846) #12 ECI2 (ENSCHIG00000016201) #14 ENSCHIG00000021666 #15 ENSCHIG00000023235 #16 PRPF4B (ENSCHIG00000014208) #17 PXDC1 (ENSCHIG00000025104) #18 SLC22A23 (ENSCHIG00000013035) #19 PSMG4 (ENSCHIG00000018602) #20 TUBB2B (ENSCHIG00000021272) #23 TUBB2A (ENSCHIG00000025595) #23 BPHL (ENSCHIG00000018519) #24 RIPK1 (ENSCHIG00000026577) #25 NQO2 (ENSCHIG00000014702) #27 ENSCHIG00000020501 #28 ENSCHIG00000014090 #28 ENSCHIG00000013116 #28 HDGFL1 (ENSCHIG00000011655) ENSCHIG00000010444 ENSCHIG00000017218 SOX4 (ENSCHIG00000013419) CDKAL1 (ENSCHIG00000022647) ENSCHIG00000022931 ENSCHIG00000010662 MBOAT1 (ENSCHIG00000009573) Goat MODERN SPECIES 15 ENSCHIG00000017222 FARS2 (ENSCHIG00000017678) #8 LYRM4 (ENSCHIG00000010740) #9 PPP1R3G (ENSCHIG00000017990) #10 ENSCHIG00000022246 RPP40 (ENSCHIG00000016849) #11 CDYL (ENSCHIG00000021846) #12 ECI2 (ENSCHIG00000016201) #14 ENSCHIG00000021666 #15 ENSCHIG00000023235 #16 PRPF4B (ENSCHIG00000014208) #17 PXDC1 (ENSCHIG00000025104) #18 SLC22A23 (ENSCHIG00000013035) #19 PSMG4 (ENSCHIG00000018602) #20 TUBB2B (ENSCHIG00000021272) #23 TUBB2A (ENSCHIG00000025595) #23 BPHL (ENSCHIG00000018519) #24 RIPK1 (ENSCHIG00000026577) #25 NQO2 (ENSCHIG00000014702) #27 ENSCHIG00000020501 #28 ENSCHIG00000014090 #28 ENSCHIG00000013116 #28 HDGFL1 (ENSCHIG00000011655) ENSCHIG00000010444 ENSCHIG00000017218 SOX4 (ENSCHIG00000013419) CDKAL1 (ENSCHIG00000022647) ENSCHIG00000022931 ENSCHIG00000010662 MBOAT1 (ENSCHIG00000009573) ID4 (ENSCHIG00000020094) Suina ANCESTRAL SPECIES 8 ENSGT00530000063853.a.a.b ENSGT00940000158071 #8 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a.b #21 ENSGT00940000154150.xb.s.b #23 ENSGT00940000154150.xb.t #23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT00940000156211.b #33 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT01070000257212 ENSGT00390000010872 ENSGT00940000159059 Pig MODERN SPECIES 15 F13A1 (ENSSSCG00000024310) NRN1 (ENSSSCG00000026211) FARS2 (ENSSSCG00000038717) #8 LYRM4 (ENSSSCG00000031269) #9 PPP1R3G (ENSSSCG00000000997) #10 RPP40 (ENSSSCG00000000998) #11 CDYL (ENSSSCG00000000999) #12 ECI2 (ENSSSCG00000001000) #14 ENSSSCG00000001001 #15 PRPF4B (ENSSSCG00000001002) #17 FAM50B (ENSSSCG00000026323) PXDC1 (ENSSSCG00000025582) #18 SLC22A23 (ENSSSCG00000001004) #19 ENSSSCG00000036988 #21 TUBB2B (ENSSSCG00000033655) #23 TUBB2A (ENSSSCG00000062050) #23 BPHL (ENSSSCG00000001008) #24 RIPK1 (ENSSSCG00000001009) #25 NQO2 (ENSSSCG00000020758) #27 ENSSSCG00000038404 #28 SERPINB9 (ENSSSCG00000031615) #29 SERPINB1 (ENSSSCG00000001011) #30 WRNIP1 (ENSSSCG00000001010) #31 ENSSSCG00000028777 #33 FOXC1 (ENSSSCG00000039756) #35 GMDS (ENSSSCG00000000994) #34 FOXF2 (ENSSSCG00000037195) #36 FOXQ1 (ENSSSCG00000000991) #37 ENSSSCG00000059227 ENSSSCG00000041494 EXOC2 (ENSSSCG00000000985) Chacoan peccary DUPLICATION Chacoan peccary MODERN SPECIES 780 ENSCWAG00000009446 #23 TUBB2A (ENSCWAG00000010033) #23 BPHL (ENSCWAG00000010053) #24 RIPK1 (ENSCWAG00000010115) #25 NQO2 (ENSCWAG00000010221) #27 ENSCWAG00000010295 #28 SERPINB9 (ENSCWAG00000010349) #29 SERPINB1 (ENSCWAG00000010393) #30 WRNIP1 (ENSCWAG00000010435) #31 MYLK4 (ENSCWAG00000010554) #33 GMDS (ENSCWAG00000010697) #34 Chacoan peccary MODERN SPECIES 780 ENSCWAG00000009446 #23 TUBB2A (ENSCWAG00000010033) #23 BPHL (ENSCWAG00000010053) #24 RIPK1 (ENSCWAG00000010115) #25 NQO2 (ENSCWAG00000010221) #27 ENSCWAG00000010295 #28 SERPINB9 (ENSCWAG00000010349) #29 SERPINB1 (ENSCWAG00000010393) #30 WRNIP1 (ENSCWAG00000010435) #31 MYLK4 (ENSCWAG00000010554) #33 GMDS (ENSCWAG00000010697) #34 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154150.xb #23 Common shrew MODERN SPECIES 8252 ENSSARG00000003430 #23 Laurasiatheria DUPLICATION Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Hedgehog MODERN SPECIES 3460 ENSEEUG00000002989 ##23 ENSEEUG00000002955 ##23 BPHL (ENSEEUG00000002899) #24 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Carnivora ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Caniformia ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Caniformia_b ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Ursidae ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Ursus ANCESTRAL SPECIES ENSGT00940000154150.wb.a ##23 Polar bear MODERN SPECIES 181 FARS2 (ENSUMAG00000018618) #8 LYRM4 (ENSUMAG00000018628) #9 RPP40 (ENSUMAG00000018639) #11 CDYL (ENSUMAG00000018648) #12 ENSUMAG00000018660 #13 ECI2 (ENSUMAG00000018673) #14 ENSUMAG00000018677 #15 FAM217A (ENSUMAG00000018684) #16 PRPF4B (ENSUMAG00000018696) #17 FAM50B (ENSUMAG00000018705) PXDC1 (ENSUMAG00000018711) #18 SLC22A23 (ENSUMAG00000018716) #19 PSMG4 (ENSUMAG00000018729) #20 ENSUMAG00000018733 #23 ENSUMAG00000018735 #23 ENSUMAG00000018737 ##23 BPHL (ENSUMAG00000018741) #24 RIPK1 (ENSUMAG00000018746) #25 NQO2 (ENSUMAG00000018754) #27 ENSUMAG00000018764 #28 SERPINB9 (ENSUMAG00000018772) #29 SERPINB1 (ENSUMAG00000018779) #30 WRNIP1 (ENSUMAG00000018782) #31 MYLK4 (ENSUMAG00000018791) #33 GMDS (ENSUMAG00000018823) #34 ENSUMAG00000018836 #35 ENSUMAG00000018847 EXOC2 (ENSUMAG00000018869) ENSUMAG00000018902 IRF4 (ENSUMAG00000018906) DUSP22 (ENSUMAG00000018924) Laurasiatheria ANCESTRAL SPECIES 7 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417 #21 ENSGT00940000154150.xb #23 ENSGT00940000175246 ENSGT00940000154150.wb.b ##23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00860000135685 Eulipotyphla ANCESTRAL SPECIES 2278 ENSGT00940000154150.wb.b ##23 ENSGT00390000004746 #24 Hedgehog MODERN SPECIES 3460 ENSEEUG00000002989 ##23 ENSEEUG00000002955 ##23 BPHL (ENSEEUG00000002899) #24 Laurasiatheria_a ANCESTRAL SPECIES 7 ENSGT00940000157289.a #9 ENSGT00940000163747 #10 ENSGT00390000014167 #11 ENSGT00940000155106 #12 ENSGT00940000155105 #14 ENSGT00390000008360 #15 ENSGT00940000154543.b #16 ENSGT00940000155562 #17 ENSGT00390000004735.B ENSGT00390000009209 #18 ENSGT00940000157354 #19 ENSGT00390000011804 #20 ENSGT00940000167417.a #21 ENSGT00940000154150.xb #23 ENSGT00940000175246 ENSGT00940000154150.wb.b ##23 ENSGT00390000004746 #24 ENSGT00940000159347 #25 ENSGT00940000156563 #27 ENSGT00940000154519 #28 ENSGT00940000154931 #29 ENSGT00940000154573 #30 ENSGT00390000008538 #31 ENSGT01000000215059 ENSGT00940000156211.b #33 ENSGT00910000147105 ENSGT00440000033640 #34 ENSGT00940000162303.b #35 ENSGT00940000162527 #36 ENSGT00940000162937.b #37 ENSGT00390000010872 Laurasiatheria_b ANCESTRAL SPECIES ENSGT00940000154150.wb.b ##23 Carnivora ANCESTRAL SPECIES ENSGT00940000154150.wb.b ##23 Felidae ANCESTRAL SPECIES ENSGT00940000154150.wb.b ##23 Panthera ANCESTRAL SPECIES ENSGT00940000154150.wb.b ##23 Tiger MODERN SPECIES 15 CAGE1 (ENSPTIG00000019168) SSR1 (ENSPTIG00000006156) LY86 (ENSPTIG00000014095) F13A1 (ENSPTIG00000014413) NRN1 (ENSPTIG00000015277) FARS2 (ENSPTIG00000016684) #8 LYRM4 (ENSPTIG00000018145) #9 RPP40 (ENSPTIG00000018847) #11 CDYL (ENSPTIG00000004597) #12 ECI2 (ENSPTIG00000007246) #14 ENSPTIG00000011297 #15 FAM217A (ENSPTIG00000011724) #16 PRPF4B (ENSPTIG00000013243) #17 PXDC1 (ENSPTIG00000015113) #18 SLC22A23 (ENSPTIG00000015797) #19 TUBB2A (ENSPTIG00000019182) ##23 BPHL (ENSPTIG00000019655) #24 RIPK1 (ENSPTIG00000000019) #25 ENSPTIG00000005890 ##26 NQO2 (ENSPTIG00000006542) #27 ENSPTIG00000008964 #28 SERPINB9 (ENSPTIG00000011314) #29 SERPINB1 (ENSPTIG00000012609) #30 WRNIP1 (ENSPTIG00000012879) #31 MYLK4 (ENSPTIG00000014895) #33 GMDS (ENSPTIG00000016896) #34 EXOC2 (ENSPTIG00000017629) IRF4 (ENSPTIG00000019685) DUSP22 (ENSPTIG00000020047)