Laurasiatheria_c	ANCESTRAL SPECIES	24	ENSGT00940000153432.A.b #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648	ENSGT00940000155805 #14	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #15	ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT01030000240358	ENSGT00390000006029 #21	ENSGT00550000074846 #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a.b #25	ENSGT01080000257333.E.o.a.a ##25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #29	ENSGT00940000159026 #30	ENSGT00940000161402	ENSGT00940000156943 #31	ENSGT00940000158673 #33	ENSGT00390000011152 #34	ENSGT00390000018344.l #35	ENSGT00940000154807.b #36	ENSGT00940000157051 #37
Chiroptera	ANCESTRAL SPECIES	26	ENSGT00940000159872 #8	ENSGT00940000153432.A.b #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648	ENSGT00940000155805 #14	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #15	ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT00390000006029 #21	ENSGT00550000074846 #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a.b #25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #29	ENSGT00940000159026 #30	ENSGT00940000161402	ENSGT00940000156943 #31	ENSGT00940000158673 #33	ENSGT00390000011152 #34	ENSGT00390000018344.l #35	ENSGT00940000154807.b #36	ENSGT00940000157051 #37	ENSGT00390000000916
Microchiroptera	ANCESTRAL SPECIES	26	ENSGT00940000159872 #8	ENSGT00940000153432.A.b #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648	ENSGT00940000155805 #14	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #15	ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT00390000006029 #21	ENSGT00550000074846 #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a.b #25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #29	ENSGT00940000159026 #30	ENSGT00940000161402	ENSGT00940000156943 #31	ENSGT00940000158673 #33	ENSGT00390000011152 #34	ENSGT00390000018344.l #35	ENSGT00940000154807.b #36	ENSGT00940000157051 #37	ENSGT00390000000916
Microbat	MODERN SPECIES	953	DYM (ENSMLUG00000003419) #7	SMAD7 (ENSMLUG00000016080) #8	CTIF (ENSMLUG00000003025) #9	ZBTB7C (ENSMLUG00000030000) #10	SMAD2 (ENSMLUG00000008857) #11	ENSMLUG00000028440 #12	ENSMLUG00000028696 #13	HDHD2 (ENSMLUG00000004087) #14	KATNAL2 (ENSMLUG00000004078) #15	ENSMLUG00000008902 #16	ST8SIA5 (ENSMLUG00000008890) #17	LOXHD1 (ENSMLUG00000008832) #18	RNF165 (ENSMLUG00000008813) #19	C18orf25 (ENSMLUG00000008806) #20	HAUS1 (ENSMLUG00000009879) #21	ATP5F1A (ENSMLUG00000009856) #22	PSTPIP2 (ENSMLUG00000009831) #23	EPG5 (ENSMLUG00000009791) #24	SIGLEC15 (ENSMLUG00000004894) #25	SLC14A1 (ENSMLUG00000004885) #26	SLC14A2 (ENSMLUG00000000990) #27	ENSMLUG00000013354 #28	ENSMLUG00000022722 #29	SYT4 (ENSMLUG00000016472) #30	PIK3C3 (ENSMLUG00000014471) #31	ENSMLUG00000028486 #32	CELF4 (ENSMLUG00000001755) #33	KIAA1328 (ENSMLUG00000001746) #34	TPGS2 (ENSMLUG00000001739) #35	FHOD3 (ENSMLUG00000001727) #36	MOCOS (ENSMLUG00000008488) #37
Greater horseshoe bat	MODERN SPECIES	10	CTIF (ENSRFEG00010014128) #9	ZBTB7C (ENSRFEG00010014086) #10	SMAD2 (ENSRFEG00010013927) #11	SKOR2 (ENSRFEG00010013793) #13	IER3IP1 (ENSRFEG00010013708)	HDHD2 (ENSRFEG00010013605) #14	ENSRFEG00010013519	KATNAL2 (ENSRFEG00010013030) #15	PIAS2 (ENSRFEG00010012942) #16	ENSRFEG00010012921	ST8SIA5 (ENSRFEG00010012732) #17	LOXHD1 (ENSRFEG00010010653) #18	RNF165 (ENSRFEG00010010311) #19	C18orf25 (ENSRFEG00010010226) #20	HAUS1 (ENSRFEG00010010163) #21	ATP5F1A (ENSRFEG00010010087) #22	PSTPIP2 (ENSRFEG00010010012) #23	EPG5 (ENSRFEG00010009969) #24	SIGLEC15 (ENSRFEG00010009873) #25	ENSRFEG00010009827	SLC14A1 (ENSRFEG00010009754) #26	SLC14A2 (ENSRFEG00010009717) #27	SETBP1 (ENSRFEG00010009647) #29	SYT4 (ENSRFEG00010009492) #30	RIT2 (ENSRFEG00010009431)	PIK3C3 (ENSRFEG00010009116) #31	ENSRFEG00010008933 #33	KIAA1328 (ENSRFEG00010008800) #34	TPGS2 (ENSRFEG00010008479) #35	FHOD3 (ENSRFEG00010008140) #36	MOCOS (ENSRFEG00010008005) #37
Megabat	MODERN SPECIES	1396												LOXHD1 (ENSPVAG00000012119) #18	RNF165 (ENSPVAG00000012118) #19	C18orf25 (ENSPVAG00000012117) #20	HAUS1 (ENSPVAG00000012116) #21	ATP5F1A (ENSPVAG00000012113) #22
Equus	ANCESTRAL SPECIES	36	ENSGT00940000153432.A.b #9	ENSGT00940000159814 #10	ENSGT00940000153499.a #11	ENSGT00940000160474 #13	ENSGT00510000047648	ENSGT00940000155805 #14	ENSGT00390000002428.a.g.b	ENSGT00940000157302 #15	ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT01030000240358	ENSGT00390000006029 #21	ENSGT00550000074846 #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a.a ##25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #29	ENSGT00940000159026 #30	ENSGT00940000161402	ENSGT00940000156943 #31	ENSGT00940000158673 #33	ENSGT00390000011152 #34	ENSGT00390000018344.l #35	ENSGT00940000154807.b #36	ENSGT00940000157051 #37	ENSGT00390000000916
Horse	MODERN SPECIES	29	CTIF (ENSECAG00000020473) #9	ZBTB7C (ENSECAG00000020456) #10	SMAD2 (ENSECAG00000015132) #11	SKOR2 (ENSECAG00000040113) #13	IER3IP1 (ENSECAG00000026829)	HDHD2 (ENSECAG00000012664) #14	ENSECAG00000010000	KATNAL2 (ENSECAG00000010207) #15	PIAS2 (ENSECAG00000002816) #16	ST8SIA5 (ENSECAG00000023864) #17	LOXHD1 (ENSECAG00000022216) #18	RNF165 (ENSECAG00000021547) #19	ENSECAG00000031869	C18orf25 (ENSECAG00000020333) #20	HAUS1 (ENSECAG00000016553) #21	ATP5F1A (ENSECAG00000021561) #22	PSTPIP2 (ENSECAG00000019025) #23	EPG5 (ENSECAG00000002267) #24	SIGLEC15 (ENSECAG00000018025) ##25	SLC14A1 (ENSECAG00000014487) #26	SLC14A2 (ENSECAG00000034918) #27	SETBP1 (ENSECAG00000019793) #29	SYT4 (ENSECAG00000017570) #30	RIT2 (ENSECAG00000016682)	ENSECAG00000047316	PIK3C3 (ENSECAG00000010657) #31	CELF4 (ENSECAG00000008810) #33	ENSECAG00000039323	KIAA1328 (ENSECAG00000007375) #34	TPGS2 (ENSECAG00000023096) #35	ENSECAG00000057964
Donkey	MODERN SPECIES	27	CTIF (ENSEASG00005016094) #9	ZBTB7C (ENSEASG00005016097) #10	SMAD2 (ENSEASG00005016099) #11	SKOR2 (ENSEASG00005016101) #13	IER3IP1 (ENSEASG00005037358)	HDHD2 (ENSEASG00005016104) #14	ENSEASG00005028481	KATNAL2 (ENSEASG00005016106) #15	ENSEASG00005016132	PIAS2 (ENSEASG00005016126) #16	ST8SIA5 (ENSEASG00005016136) #17	LOXHD1 (ENSEASG00005016151) #18	RNF165 (ENSEASG00005016163) #19	C18orf25 (ENSEASG00005016164) #20	HAUS1 (ENSEASG00005016165) #21	ATP5F1A (ENSEASG00005016183) #22	PSTPIP2 (ENSEASG00005016428) #23	SIGLEC15 (ENSEASG00005034343) ##25	EPG5 (ENSEASG00005016455) #24	SLC14A1 (ENSEASG00005016489) #26	SLC14A2 (ENSEASG00005016499) #27	SETBP1 (ENSEASG00005016505) #29	SYT4 (ENSEASG00005016507) #30	RIT2 (ENSEASG00005031366)	PIK3C3 (ENSEASG00005016514) #31	ENSEASG00005037255	CELF4 (ENSEASG00005016534) #33	KIAA1328 (ENSEASG00005016543) #34	TPGS2 (ENSEASG00005016548) #35	FHOD3 (ENSEASG00005016560) #36	MOCOS (ENSEASG00005016577) #37