Euarchontoglires_A ANCESTRAL SPECIES 22 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT00390000002428.a.g.b ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Glires ANCESTRAL SPECIES 23 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT00390000002428.a.g.b ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Rodentia ANCESTRAL SPECIES 23 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00390000002428.a.g.b ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Rodentia_A ANCESTRAL SPECIES 23 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00390000002428.a.g.b ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Sciuridae DUPLICATION Sciuridae ANCESTRAL SPECIES 31 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00390000002428.a.g.b ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846.z #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Marmotini ANCESTRAL SPECIES 31 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT01030000236530 #13 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846.z #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Alpin marmot MODERN SPECIES 10 C18orf32 (ENSMMMG00000006157) #7 DYM (ENSMMMG00000006170) #8 SMAD7 (ENSMMMG00000006202) #9 CTIF (ENSMMMG00000006232) #10 ZBTB7C (ENSMMMG00000006278) #11 SMAD2 (ENSMMMG00000006290) #12 ENSMMMG00000006338 #13 HDHD2 (ENSMMMG00000006342) #14 KATNAL2 (ENSMMMG00000006351) #15 PIAS2 (ENSMMMG00000006515) #16 ST8SIA5 (ENSMMMG00000006633) #17 LOXHD1 (ENSMMMG00000006669) #18 RNF165 (ENSMMMG00000006757) #19 C18orf25 (ENSMMMG00000006777) #20 HAUS1 (ENSMMMG00000006810) #21 ATP5F1A (ENSMMMG00000006823) #22 PSTPIP2 (ENSMMMG00000006839) #23 EPG5 (ENSMMMG00000006854) #24 SIGLEC15 (ENSMMMG00000006905) #25 SLC14A1 (ENSMMMG00000006914) #26 SLC14A2 (ENSMMMG00000006939) #27 SETBP1 (ENSMMMG00000006996) #28 SYT4 (ENSMMMG00000007022) #29 RIT2 (ENSMMMG00000007046) #30 ENSMMMG00000007059 #31 PIK3C3 (ENSMMMG00000007071) #32 CELF4 (ENSMMMG00000007204) #33 KIAA1328 (ENSMMMG00000007270) #34 TPGS2 (ENSMMMG00000007348) #35 FHOD3 (ENSMMMG00000007376) #36 ENSMMMG00000007438 #37 Marmotini_b ANCESTRAL SPECIES 137 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846.z #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Squirrel MODERN SPECIES 117 PIAS2 (ENSSTOG00000014612) #16 ST8SIA5 (ENSSTOG00000027926) #17 LOXHD1 (ENSSTOG00000023476) #18 RNF165 (ENSSTOG00000023324) #19 C18orf25 (ENSSTOG00000006376) #20 HAUS1 (ENSSTOG00000003708) #21 ATP5F1A (ENSSTOG00000003680) #22 PSTPIP2 (ENSSTOG00000003652) #23 EPG5 (ENSSTOG00000021864) #24 SIGLEC15 (ENSSTOG00000002555) #25 SLC14A1 (ENSSTOG00000002535) #26 SLC14A2 (ENSSTOG00000002511) #27 SETBP1 (ENSSTOG00000002563) #28 SYT4 (ENSSTOG00000009215) #29 RIT2 (ENSSTOG00000027357) #30 PIK3C3 (ENSSTOG00000013565) #32 ENSSTOG00000009698 #33 ENSSTOG00000030096 #34 ENSSTOG00000031930 TPGS2 (ENSSTOG00000011053) #35 FHOD3 (ENSSTOG00000024002) #36 ENSSTOG00000020333 Arctic ground squirrel MODERN SPECIES 622 PIAS2 (ENSUPAG00010010887) #16 ST8SIA5 (ENSUPAG00010010865) #17 LOXHD1 (ENSUPAG00010010785) #18 ENSUPAG00010010781 #19 ENSUPAG00010010778 C18orf25 (ENSUPAG00010010766) #20 ENSUPAG00010010762 #37 ENSUPAG00010010754 #21 ATP5F1A (ENSUPAG00010010740) #22 Eurasian red squirrel MODERN SPECIES 4 SMAD7 (ENSSVLG00005019787) #9 CTIF (ENSSVLG00005019619) #10 ZBTB7C (ENSSVLG00005019433) #11 ENSSVLG00005019379 #12 SKOR2 (ENSSVLG00005019180) ENSSVLG00005019150 HDHD2 (ENSSVLG00005019073) #14 ENSSVLG00005019019 KATNAL2 (ENSSVLG00005018737) #15 ENSSVLG00005018588 #16 ST8SIA5 (ENSSVLG00005018346) #17 LOXHD1 (ENSSVLG00005016724) #18 RNF165 (ENSSVLG00005016476) #19 C18orf25 (ENSSVLG00005016394) #20 HAUS1 (ENSSVLG00005016339) #21 ATP5F1A (ENSSVLG00005016277) #22 ENSSVLG00005016239 PSTPIP2 (ENSSVLG00005016011) #23 EPG5 (ENSSVLG00005015968) #24 SIGLEC15 (ENSSVLG00005015863) #25 SLC14A1 (ENSSVLG00005015590) #26 ENSSVLG00005015418 #27 SETBP1 (ENSSVLG00005015356) #28 ENSSVLG00005015263 SYT4 (ENSSVLG00005021147) #29 RIT2 (ENSSVLG00005020975) #30 ENSSVLG00005020916 PIK3C3 (ENSSVLG00005020640) #32 CELF4 (ENSSVLG00005019912) #33 KIAA1328 (ENSSVLG00005019689) #34 TPGS2 (ENSSVLG00005019531) #35 Sciuridae ANCESTRAL SPECIES 162 ENSGT00550000074846.y ##22 ENSGT00390000000747.g Marmotini ANCESTRAL SPECIES 267 ENSGT00550000074846.y ##22 ENSGT00390000000747.g Alpin marmot MODERN SPECIES 335 ENSMMMG00000009521 ##22 ENSMMMG00000009530 Hystricomorpha ANCESTRAL SPECIES 32 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029.q #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Naked mole-rat female DUPLICATION Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000040505 ENSHGLG00000048272 #31 ENSHGLG00000042101 #9 ENSHGLG00000031912 SMAD2 (ENSHGLG00000008711) #12 SKOR2 (ENSHGLG00000035792) ENSHGLG00000048898 HDHD2 (ENSHGLG00000010130) #14 ENSHGLG00000034217 #15 ENSHGLG00000040167 PIAS2 (ENSHGLG00000015588) #16 ST8SIA5 (ENSHGLG00000040367) #17 ENSHGLG00000006211 #18 RNF165 (ENSHGLG00000035767) #19 C18orf25 (ENSHGLG00000041108) #20 ENSHGLG00000036445 #22 ENSHGLG00000036850 #21 ENSHGLG00000009522 #22 PSTPIP2 (ENSHGLG00000005740) #23 SLC14A1 (ENSHGLG00000007316) #26 ENSHGLG00000005880 #27 ENSHGLG00000046959 #27 ENSHGLG00000033588 ENSHGLG00000040364 #28 ENSHGLG00000001864 ENSHGLG00000041163 ENSHGLG00000043125 ENSHGLG00000002070 ENSHGLG00000039994 ENSHGLG00000048003 ENSHGLG00000048589 #29 Naked mole-rat female MODERN SPECIES 9 ENSHGLG00000042101 #9 ENSHGLG00000031912 SMAD2 (ENSHGLG00000008711) #12 SKOR2 (ENSHGLG00000035792) ENSHGLG00000048898 HDHD2 (ENSHGLG00000010130) #14 ENSHGLG00000034217 #15 ENSHGLG00000040167 PIAS2 (ENSHGLG00000015588) #16 ST8SIA5 (ENSHGLG00000040367) #17 ENSHGLG00000006211 #18 RNF165 (ENSHGLG00000035767) #19 C18orf25 (ENSHGLG00000041108) #20 ENSHGLG00000036445 #22 ENSHGLG00000036850 #21 ENSHGLG00000009522 #22 PSTPIP2 (ENSHGLG00000005740) #23 SLC14A1 (ENSHGLG00000007316) #26 ENSHGLG00000005880 #27 ENSHGLG00000046959 #27 ENSHGLG00000033588 ENSHGLG00000040364 #28 ENSHGLG00000001864 ENSHGLG00000041163 ENSHGLG00000043125 ENSHGLG00000002070 ENSHGLG00000039994 ENSHGLG00000048003 ENSHGLG00000048589 #29 RIT2 (ENSHGLG00000002499) #30 ENSHGLG00000037189 Hystricomorpha_a ANCESTRAL SPECIES 26 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029.q #21 ENSGT00390000006029.p #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Hystricomorpha_b ANCESTRAL SPECIES 21 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029.q #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 ENSGT00390000000916 Long-tailed chinchilla MODERN SPECIES 109 DYM (ENSCLAG00000008080) #8 SMAD7 (ENSCLAG00000007063) #9 CTIF (ENSCLAG00000008174) #10 ZBTB7C (ENSCLAG00000012082) #11 SMAD2 (ENSCLAG00000011258) #12 SKOR2 (ENSCLAG00000012544) IER3IP1 (ENSCLAG00000007652) HDHD2 (ENSCLAG00000006391) #14 KATNAL2 (ENSCLAG00000013657) #15 ENSCLAG00000011621 #16 ST8SIA5 (ENSCLAG00000012639) #17 LOXHD1 (ENSCLAG00000011718) #18 RNF165 (ENSCLAG00000009534) #19 C18orf25 (ENSCLAG00000008611) #20 HAUS1 (ENSCLAG00000012155) #21 ATP5F1A (ENSCLAG00000014431) #22 ENSCLAG00000015055 PSTPIP2 (ENSCLAG00000011006) #23 EPG5 (ENSCLAG00000009230) #24 SIGLEC15 (ENSCLAG00000007394) #25 SLC14A1 (ENSCLAG00000007299) #26 SLC14A2 (ENSCLAG00000012015) #27 SETBP1 (ENSCLAG00000010509) #28 ENSCLAG00000008619 SYT4 (ENSCLAG00000008440) #29 RIT2 (ENSCLAG00000007553) #30 PIK3C3 (ENSCLAG00000014762) #32 CELF4 (ENSCLAG00000008344) #33 KIAA1328 (ENSCLAG00000009322) #34 TPGS2 (ENSCLAG00000008336) #35 FHOD3 (ENSCLAG00000010998) #36 Degu MODERN SPECIES 44 ENSODEG00000018340 ENSODEG00000018367 SKOR2 (ENSODEG00000018363) IER3IP1 (ENSODEG00000018375) HDHD2 (ENSODEG00000018388) #14 KATNAL2 (ENSODEG00000018481) #15 ENSODEG00000018457 ENSODEG00000020536 ENSODEG00000018432 #16 ST8SIA5 (ENSODEG00000018352) #17 ENSODEG00000020498 LOXHD1 (ENSODEG00000018482) #18 RNF165 (ENSODEG00000018412) #19 C18orf25 (ENSODEG00000018458) #20 ENSODEG00000018366 #21 ATP5F1A (ENSODEG00000018359) #22 ENSODEG00000020534 ENSODEG00000018334 PSTPIP2 (ENSODEG00000018461) #23 EPG5 (ENSODEG00000018404) #24 SIGLEC15 (ENSODEG00000018459) #25 SLC14A1 (ENSODEG00000018379) #26 SLC14A2 (ENSODEG00000018353) #27 SETBP1 (ENSODEG00000018419) #28 SYT4 (ENSODEG00000018346) #29 RIT2 (ENSODEG00000018423) #30 PIK3C3 (ENSODEG00000018465) #32 ENSODEG00000018374 ENSODEG00000018343 CELF4 (ENSODEG00000018464) #33 ENSODEG00000018335 #34 Guinea pig MODERN SPECIES 14 C18orf32 (ENSCPOG00000034745) #7 DYM (ENSCPOG00000013484) #8 SMAD7 (ENSCPOG00000030295) #9 CTIF (ENSCPOG00000001049) #10 ZBTB7C (ENSCPOG00000040464) #11 SMAD2 (ENSCPOG00000013398) #12 SKOR2 (ENSCPOG00000021920) IER3IP1 (ENSCPOG00000040200) HDHD2 (ENSCPOG00000030325) #14 KATNAL2 (ENSCPOG00000008150) #15 ENSCPOG00000003067 #16 ST8SIA5 (ENSCPOG00000030161) #17 LOXHD1 (ENSCPOG00000009824) #18 RNF165 (ENSCPOG00000009298) #19 HAUS1 (ENSCPOG00000012723) #21 ATP5F1A (ENSCPOG00000012719) #22 PSTPIP2 (ENSCPOG00000004876) #23 EPG5 (ENSCPOG00000012114) #24 SLC14A1 (ENSCPOG00000007979) #26 ENSCPOG00000007976 #27 SETBP1 (ENSCPOG00000011164) #28 SYT4 (ENSCPOG00000009941) #29 RIT2 (ENSCPOG00000009357) #30 PIK3C3 (ENSCPOG00000004375) #32 ENSCPOG00000040621 CELF4 (ENSCPOG00000035956) #33 ENSCPOG00000040211 #34 ENSCPOG00000033026 TPGS2 (ENSCPOG00000001354) #35 FHOD3 (ENSCPOG00000001349) #36 MOCOS (ENSCPOG00000012104) Rodentia_B ANCESTRAL SPECIES 27 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00940000164615 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 Kangaroo rat MODERN SPECIES 344 Pias2 (ENSDORG00000013246) #16 St8sia5 (ENSDORG00000014254) #17 ENSDORG00000014253 #18 Rnf165 (ENSDORG00000008058) #19 8030462N17Rik (ENSDORG00000004172) #20 Haus1 (ENSDORG00000023830) #21 Atp5a1 (ENSDORG00000009630) #22 Pstpip2 (ENSDORG00000003911) #23 Epg5 (ENSDORG00000013620) #24 ENSDORG00000013618 Slc14a1 (ENSDORG00000014939) #26 ENSDORG00000014932 #27 Setbp1 (ENSDORG00000006424) #28 Syt4 (ENSDORG00000012271) #29 Rit2 (ENSDORG00000009400) #30 Pik3c3 (ENSDORG00000014804) #32 ENSDORG00000028143 Celf4 (ENSDORG00000007169) #33 ENSDORG00000007168 Tpgs2 (ENSDORG00000007166) #35 Fhod3 (ENSDORG00000007164) #36 Mocos (ENSDORG00000007163) Myomorpha ANCESTRAL SPECIES 35 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A ENSGT00940000154686 ENSGT00390000018415 Lesser Egyptian jerboa DUPLICATION Lesser Egyptian jerboa MODERN SPECIES 60 Ctif (ENSJJAG00000013706) #10 ENSJJAG00000000639 Zbtb7c (ENSJJAG00000005484) #11 ENSJJAG00000000783 Smad2 (ENSJJAG00000021902) #12 Skor2 (ENSJJAG00000013235) ENSJJAG00000009768 Hdhd2 (ENSJJAG00000020515) #14 Katnal2 (ENSJJAG00000013360) #15 ENSJJAG00000021561 #16 St8sia5 (ENSJJAG00000023613) #17 Loxhd1 (ENSJJAG00000012049) #18 Rnf165 (ENSJJAG00000014596) #19 8030462N17Rik (ENSJJAG00000015948) #20 ENSJJAG00000014908 #21 ENSJJAG00000022136 #22 Pstpip2 (ENSJJAG00000011600) #23 Epg5 (ENSJJAG00000008036) #24 Siglec15 (ENSJJAG00000011775) #25 Slc14a1 (ENSJJAG00000009670) #26 ENSJJAG00000021572 #27 Setbp1 (ENSJJAG00000004320) #28 ENSJJAG00000000736 Mc2r (ENSJJAG00000000906) Mc5r (ENSJJAG00000012730) Rnmt (ENSJJAG00000024212) Fam210a (ENSJJAG00000023094) ENSJJAG00000001552 Ldlrad4 (ENSJJAG00000016449) ENSJJAG00000000778 ENSJJAG00000021543 Lesser Egyptian jerboa MODERN SPECIES 108 Arhgap29 (ENSJJAG00000016273) Abcd3 (ENSJJAG00000012890) F3 (ENSJJAG00000011091) Slc44a3 (ENSJJAG00000010238) Cnn3 (ENSJJAG00000009894) Alg14 (ENSJJAG00000006879) Tlcd4 (ENSJJAG00000012418) ENSJJAG00000011561 Ptbp2 (ENSJJAG00000023985) Dpyd (ENSJJAG00000023195) ENSJJAG00000021970 ENSJJAG00000021559 Snx7 (ENSJJAG00000020217) Plppr5 (ENSJJAG00000019001) Plppr4 (ENSJJAG00000018478) ENSJJAG00000014146 #22 Palmd (ENSJJAG00000014018) Frrs1 (ENSJJAG00000022287) Agl (ENSJJAG00000019943) Slc35a3 (ENSJJAG00000017210) Mfsd14a (ENSJJAG00000009694) ENSJJAG00000006236 Sass6 (ENSJJAG00000021079) Trmt13 (ENSJJAG00000018012) Lrrc39 (ENSJJAG00000015686) ENSJJAG00000000497 ENSJJAG00000023095 ENSJJAG00000021982 Muroidea ANCESTRAL SPECIES 13 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT01030000234510.a.a.b ENSGT01030000234510.a.a.a.a.a.a ENSGT00390000002368 ENSGT00940000156554 ENSGT00390000000724.c.b ENSGT00510000048187 ENSGT00940000153393.A ENSGT00940000154686 ENSGT00390000018415 Upper Galilee mountains blind mole rat MODERN SPECIES 1888 ENSNGAG00000001549 Smad7 (ENSNGAG00000004962) #9 Ctif (ENSNGAG00000011452) #10 Zbtb7c (ENSNGAG00000012022) #11 Smad2 (ENSNGAG00000013343) #12 Skor2 (ENSNGAG00000018430) ENSNGAG00000020722 Hdhd2 (ENSNGAG00000000250) #14 Katnal2 (ENSNGAG00000010954) #15 Pias2 (ENSNGAG00000010511) #16 St8sia5 (ENSNGAG00000017269) #17 Loxhd1 (ENSNGAG00000020158) #18 Rnf165 (ENSNGAG00000012965) #19 8030462N17Rik (ENSNGAG00000014428) #20 Haus1 (ENSNGAG00000001553) #21 Atp5a1 (ENSNGAG00000009807) #22 Pstpip2 (ENSNGAG00000018122) #23 Epg5 (ENSNGAG00000005612) #24 Siglec15 (ENSNGAG00000013867) #25 Slc14a1 (ENSNGAG00000014056) #26 ENSNGAG00000015050 #27 Setbp1 (ENSNGAG00000016368) #28 Mc2r (ENSNGAG00000014364) Mc5r (ENSNGAG00000008073) Rnmt (ENSNGAG00000014958) Fam210a (ENSNGAG00000011579) Ldlrad4 (ENSNGAG00000000898) ENSNGAG00000020859 Muroidea_A ANCESTRAL SPECIES 18 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 Murinae ANCESTRAL SPECIES 17 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 Mus ANCESTRAL SPECIES 19 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648.c ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 Mus_A ANCESTRAL SPECIES 19 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648.c ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT01100000265037 ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 Mus_B ANCESTRAL SPECIES 19 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648.c ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT01100000265037 ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a Mouse MODERN SPECIES 9 Dym (ENSMUSG00000035765) #8 Smad7 (ENSMUSG00000025880) #9 Ctif (ENSMUSG00000052928) #10 Zbtb7c (ENSMUSG00000044646) #11 Smad2 (ENSMUSG00000024563) #12 Skor2 (ENSMUSG00000091519) Ier3ip1 (ENSMUSG00000090000) #13 Hdhd2 (ENSMUSG00000025421) #14 Katnal2 (ENSMUSG00000025420) #15 Pias2 (ENSMUSG00000025423) #16 St8sia5 (ENSMUSG00000025425) #17 Loxhd1 (ENSMUSG00000032818) #18 Rnf165 (ENSMUSG00000025427) #19 8030462N17Rik (ENSMUSG00000047466) #20 Haus1 (ENSMUSG00000041840) #21 Atp5a1 (ENSMUSG00000025428) #22 Pstpip2 (ENSMUSG00000025429) #23 Epg5 (ENSMUSG00000039840) #24 Siglec15 (ENSMUSG00000091055) #25 Slc14a1 (ENSMUSG00000059336) #26 Slc14a2 (ENSMUSG00000024552) #27 Gm6133 (ENSMUSG00000090451) Setbp1 (ENSMUSG00000024548) #28 Pard6g (ENSMUSG00000056214) Adnp2 (ENSMUSG00000053950) Rbfa (ENSMUSG00000024570) Naa12 (ENSMUSG00000024571) Txnl4a (ENSMUSG00000057130) Hsbp1l1 (ENSMUSG00000078963) Slc66a2 (ENSMUSG00000034006) Kcng2 (ENSMUSG00000059852) Mus_C ANCESTRAL SPECIES 16 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648.c ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00950000183010.a.b.a.a.a.a.a.b.l.d ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT01100000265037 ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00940000164242.b ENSGT00550000076117 ENSGT00390000002381.a Steppe mouse MODERN SPECIES 2730 ENSMSIG00000031992 #16 St8sia5 (ENSMSIG00000031990) #17 Loxhd1 (ENSMSIG00000031989) #18 Rnf165 (ENSMSIG00000031988) #19 8030462N17Rik (ENSMSIG00000031987) #20 Haus1 (ENSMSIG00000031985) #21 Atp5a1 (ENSMSIG00000031984) #22 Pstpip2 (ENSMSIG00000031982) #23 spretus MODERN SPECIES 9 Dym (MGP_SPRETEiJ_G0023319) #8 Smad7 (MGP_SPRETEiJ_G0023320) #9 Ctif (MGP_SPRETEiJ_G0023321) #10 Zbtb7c (MGP_SPRETEiJ_G0023322) #11 Smad2 (MGP_SPRETEiJ_G0023323) #12 Skor2 (MGP_SPRETEiJ_G0023324) MGP_SPRETEiJ_G0023325 Hdhd2 (MGP_SPRETEiJ_G0023326) #14 Katnal2 (MGP_SPRETEiJ_G0023327) #15 Pias2 (MGP_SPRETEiJ_G0023328) #16 MGP_SPRETEiJ_G0023329 St8sia5 (MGP_SPRETEiJ_G0023330) #17 Loxhd1 (MGP_SPRETEiJ_G0023331) #18 8030462N17Rik (MGP_SPRETEiJ_G0023333) #20 Haus1 (MGP_SPRETEiJ_G0023334) #21 Atp5a1 (MGP_SPRETEiJ_G0023335) #22 Pstpip2 (MGP_SPRETEiJ_G0023336) #23 Epg5 (MGP_SPRETEiJ_G0023337) #24 Siglec15 (MGP_SPRETEiJ_G0023338) #25 Slc14a1 (MGP_SPRETEiJ_G0023339) #26 Slc14a2 (MGP_SPRETEiJ_G0023340) #27 MGP_SPRETEiJ_G0023341 Setbp1 (MGP_SPRETEiJ_G0023342) #28 Eola1 (MGP_SPRETEiJ_G0023343) MGP_SPRETEiJ_G0023344 Pard6g (MGP_SPRETEiJ_G0023345) MGP_SPRETEiJ_G0023346 Adnp2 (MGP_SPRETEiJ_G0023347) Rbfa (MGP_SPRETEiJ_G0023348) Naa12 (MGP_SPRETEiJ_G0023349) Txnl4a (MGP_SPRETEiJ_G0023350) Ryukyu mouse MODERN SPECIES 9 Smad7 (MGP_CAROLIEiJ_G0022407) #9 Ctif (MGP_CAROLIEiJ_G0022408) #10 Zbtb7c (MGP_CAROLIEiJ_G0022409) #11 Smad2 (MGP_CAROLIEiJ_G0022410) #12 Skor2 (MGP_CAROLIEiJ_G0022411) MGP_CAROLIEiJ_G0022412 Hdhd2 (MGP_CAROLIEiJ_G0022413) #14 Katnal2 (MGP_CAROLIEiJ_G0022414) #15 Pias2 (MGP_CAROLIEiJ_G0022415) #16 MGP_CAROLIEiJ_G0022416 St8sia5 (MGP_CAROLIEiJ_G0022417) #17 Loxhd1 (MGP_CAROLIEiJ_G0022418) #18 Rnf165 (MGP_CAROLIEiJ_G0022419) #19 8030462N17Rik (MGP_CAROLIEiJ_G0022420) #20 Haus1 (MGP_CAROLIEiJ_G0022421) #21 Atp5a1 (MGP_CAROLIEiJ_G0022422) #22 Pstpip2 (MGP_CAROLIEiJ_G0022423) #23 MGP_CAROLIEiJ_G0022424 #24 Siglec15 (MGP_CAROLIEiJ_G0022425) #25 Slc14a1 (MGP_CAROLIEiJ_G0022426) #26 Slc14a2 (MGP_CAROLIEiJ_G0022427) #27 MGP_CAROLIEiJ_G0022428 Setbp1 (MGP_CAROLIEiJ_G0022429) #28 Pard6g (MGP_CAROLIEiJ_G0022430) MGP_CAROLIEiJ_G0022431 Adnp2 (MGP_CAROLIEiJ_G0022432) Rbfa (MGP_CAROLIEiJ_G0022433) Naa12 (MGP_CAROLIEiJ_G0022434) Txnl4a (MGP_CAROLIEiJ_G0022435) Hsbp1l1 (MGP_CAROLIEiJ_G0022436) Slc66a2 (MGP_CAROLIEiJ_G0022437) Shrew mouse MODERN SPECIES 6 Smad7 (MGP_PahariEiJ_G0019136) #9 Ctif (MGP_PahariEiJ_G0019137) #10 Zbtb7c (MGP_PahariEiJ_G0019138) #11 Smad2 (MGP_PahariEiJ_G0019139) #12 Skor2 (MGP_PahariEiJ_G0019140) MGP_PahariEiJ_G0019141 Hdhd2 (MGP_PahariEiJ_G0019142) #14 Katnal2 (MGP_PahariEiJ_G0019143) #15 Pias2 (MGP_PahariEiJ_G0019144) #16 MGP_PahariEiJ_G0019145 St8sia5 (MGP_PahariEiJ_G0019146) #17 MGP_PahariEiJ_G0019147 #18 Rnf165 (MGP_PahariEiJ_G0019148) #19 8030462N17Rik (MGP_PahariEiJ_G0019149) #20 Haus1 (MGP_PahariEiJ_G0019150) #21 Atp5a1 (MGP_PahariEiJ_G0019151) #22 Pstpip2 (MGP_PahariEiJ_G0019152) #23 Epg5 (MGP_PahariEiJ_G0019153) #24 Siglec15 (MGP_PahariEiJ_G0019154) #25 Slc14a1 (MGP_PahariEiJ_G0019155) #26 Slc14a2 (MGP_PahariEiJ_G0019156) #27 MGP_PahariEiJ_G0019157 Setbp1 (MGP_PahariEiJ_G0019158) #28 Pard6g (MGP_PahariEiJ_G0019159) Adnp2 (MGP_PahariEiJ_G0019160) Rbfa (MGP_PahariEiJ_G0019161) Naa12 (MGP_PahariEiJ_G0019162) Txnl4a (MGP_PahariEiJ_G0019163) Hsbp1l1 (MGP_PahariEiJ_G0019164) Slc66a2 (MGP_PahariEiJ_G0019165) Kcng2 (MGP_PahariEiJ_G0019166) Rat MODERN SPECIES 9 Smad7 (ENSRNOG00000018359) #9 Ctif (ENSRNOG00000018342) #10 ENSRNOG00000067472 Zbtb7c (ENSRNOG00000047924) #11 Smad2 (ENSRNOG00000018140) #12 Skor2 (ENSRNOG00000018006) Ier3ip1 (ENSRNOG00000043171) #14 Katnal2 (ENSRNOG00000017788) #15 Pias2 (ENSRNOG00000017493) #16 St8sia5 (ENSRNOG00000022691) #17 Loxhd1 (ENSRNOG00000017410) #18 Rnf165 (ENSRNOG00000048824) #19 RGD1308601 (ENSRNOG00000017215) #20 ENSRNOG00000063575 Haus1 (ENSRNOG00000017067) #21 Atp5f1a (ENSRNOG00000017032) #22 Pstpip2 (ENSRNOG00000016987) #23 Epg5 (ENSRNOG00000052894) #24 Siglec15 (ENSRNOG00000033588) #25 Slc14a1 (ENSRNOG00000016753) #26 Slc14a2 (ENSRNOG00000061714) #27 Setbp1 (ENSRNOG00000016208) #28 ENSRNOG00000065450 Pard6g (ENSRNOG00000055157) Adnp2 (ENSRNOG00000053370) Rbfa (ENSRNOG00000055647) RGD1560212 (ENSRNOG00000057774) Hsbp1l1 (ENSRNOG00000059055) Slc66a2 (ENSRNOG00000059215) Kcng2 (ENSRNOG00000053640) Ctdp1 (ENSRNOG00000061474) Cricetidae DUPLICATION Cricetidae ANCESTRAL SPECIES 18 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846.u #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a.e #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 Cricetinae ANCESTRAL SPECIES 14 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846.u #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a.e #26 ENSGT00390000018729.a.b #27 Chinese hamster chok1gshd MODERN SPECIES 314 Zbtb7c (ENSCGRG00001005320) #11 Smad2 (ENSCGRG00001006348) #12 Skor2 (ENSCGRG00001007925) Hdhd2 (ENSCGRG00001009445) #14 Katnal2 (ENSCGRG00001010923) #15 Pias2 (ENSCGRG00001023617) #16 St8sia5 (ENSCGRG00001004611) #17 Loxhd1 (ENSCGRG00001009440) #18 Rnf165 (ENSCGRG00001011050) #19 8030462N17Rik (ENSCGRG00001011465) #20 Haus1 (ENSCGRG00001012089) #21 Atp5a1 (ENSCGRG00001012335) #22 Pstpip2 (ENSCGRG00001012933) #23 Epg5 (ENSCGRG00001013764) #24 Siglec15 (ENSCGRG00001014278) #25 ENSCGRG00001014534 Slc14a1 (ENSCGRG00001014682) #26 Slc14a2 (ENSCGRG00001015350) #27 ENSCGRG00001002557 Setbp1 (ENSCGRG00001003049) #28 ENSCGRG00001005434 Golden Hamster MODERN SPECIES 680 ENSMAUG00000020878 Smad7 (ENSMAUG00000020326) #9 Ctif (ENSMAUG00000000656) #10 Zbtb7c (ENSMAUG00000000374) #11 Smad2 (ENSMAUG00000006737) #12 Skor2 (ENSMAUG00000016006) ENSMAUG00000012040 Hdhd2 (ENSMAUG00000019526) #14 Katnal2 (ENSMAUG00000019836) #15 Pias2 (ENSMAUG00000014565) #16 St8sia5 (ENSMAUG00000011966) #17 Loxhd1 (ENSMAUG00000010353) #18 Rnf165 (ENSMAUG00000017550) #19 8030462N17Rik (ENSMAUG00000006561) #20 Haus1 (ENSMAUG00000009723) #21 Atp5f1a (ENSMAUG00000019838) #22 Pstpip2 (ENSMAUG00000014774) #23 Epg5 (ENSMAUG00000019707) #24 Siglec15 (ENSMAUG00000000352) #25 Slc14a1 (ENSMAUG00000014121) #26 ENSMAUG00000018876 #27 ENSMAUG00000006240 ENSMAUG00000014437 Toporsl (ENSMAUG00000021881) Or13c3 (ENSMAUG00000004828) Or13c25 (ENSMAUG00000001767) ENSMAUG00000004208 Or13d1 (ENSMAUG00000004601) Nipsnap3a (ENSMAUG00000000390) Nipsnap3b (ENSMAUG00000013369) Abca1 (ENSMAUG00000014255) Cricetidae_B ANCESTRAL SPECIES 15 ENSGT00390000008772 #8 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846.u #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a.e #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00950000183211.a.b ENSGT00530000063631.a ENSGT00390000011362 ENSGT00390000010779.a.a ENSGT00550000076117 ENSGT00390000002381.a ENSGT00940000160858 ENSGT00390000015641 ENSGT00940000157616 Northern American deer mouse MODERN SPECIES 10 Dym (ENSPEMG00000020826) #8 Smad7 (ENSPEMG00000021331) #9 Ctif (ENSPEMG00000022746) #10 Zbtb7c (ENSPEMG00000020629) #11 Smad2 (ENSPEMG00000020383) #12 Skor2 (ENSPEMG00000022190) ENSPEMG00000026193 Hdhd2 (ENSPEMG00000020912) #14 Katnal2 (ENSPEMG00000021096) #15 Pias2 (ENSPEMG00000022220) #16 St8sia5 (ENSPEMG00000022119) #17 Loxhd1 (ENSPEMG00000022919) #18 ENSPEMG00000029031 #19 8030462N17Rik (ENSPEMG00000010341) #20 Haus1 (ENSPEMG00000021388) #21 Atp5a1 (ENSPEMG00000022004) #22 Pstpip2 (ENSPEMG00000022379) #23 Epg5 (ENSPEMG00000022153) #24 Siglec15 (ENSPEMG00000024146) #25 ENSPEMG00000028869 Slc14a1 (ENSPEMG00000008835) #26 ENSPEMG00000022112 #27 Setbp1 (ENSPEMG00000021869) #28 ENSPEMG00000006471 Pard6g (ENSPEMG00000025457) Adnp2 (ENSPEMG00000023970) Rbfa (ENSPEMG00000021588) Txnl4a (ENSPEMG00000021776) Hsbp1l1 (ENSPEMG00000028002) Slc66a2 (ENSPEMG00000021424) Kcng2 (ENSPEMG00000026971) Prairie vole MODERN SPECIES 5 Dym (ENSMOCG00000022593) #8 Smad7 (ENSMOCG00000001269) #9 Ctif (ENSMOCG00000020507) #10 Zbtb7c (ENSMOCG00000017640) #11 Smad2 (ENSMOCG00000017648) #12 Skor2 (ENSMOCG00000018264) ENSMOCG00000009073 Hdhd2 (ENSMOCG00000008063) #14 Katnal2 (ENSMOCG00000011716) #15 Pias2 (ENSMOCG00000015605) #16 St8sia5 (ENSMOCG00000011361) #17 Loxhd1 (ENSMOCG00000016732) #18 ENSMOCG00000019837 #19 8030462N17Rik (ENSMOCG00000000844) #20 Haus1 (ENSMOCG00000011366) #21 Atp5a1 (ENSMOCG00000009175) #22 Pstpip2 (ENSMOCG00000006361) #23 Epg5 (ENSMOCG00000015567) #24 Siglec15 (ENSMOCG00000007709) #25 ENSMOCG00000002421 #26 Slc14a2 (ENSMOCG00000013965) #27 Setbp1 (ENSMOCG00000021557) #28 Pard6g (ENSMOCG00000019881) ENSMOCG00000019582 Rbfa (ENSMOCG00000018963) Txnl4a (ENSMOCG00000012922) Hsbp1l1 (ENSMOCG00000000864) Slc66a2 (ENSMOCG00000005974) Kcng2 (ENSMOCG00000011974) Ctdp1 (ENSMOCG00000017315) Nfatc1 (ENSMOCG00000017415) Cricetidae ANCESTRAL SPECIES ENSGT00550000074846.v #22 Cricetidae_B ANCESTRAL SPECIES ENSGT00550000074846.v #22 Northern American deer mouse MODERN SPECIES 475 Spin4 (ENSPEMG00000002526) Arhgef9 (ENSPEMG00000012933) Amer1 (ENSPEMG00000012693) Asb12 (ENSPEMG00000000256) Pfn5 (ENSPEMG00000030788) Zc4h2 (ENSPEMG00000026603) ENSPEMG00000031140 Zc3h12b (ENSPEMG00000030441) Las1l (ENSPEMG00000001210) Msn (ENSPEMG00000014831) Vsig4 (ENSPEMG00000005797) ENSPEMG00000028906 Hsf3 (ENSPEMG00000001674) Heph (ENSPEMG00000000424) Gpr165 (ENSPEMG00000027719) ENSPEMG00000029584 #22 Pgr15l (ENSPEMG00000011660) Eda2r (ENSPEMG00000010048) ENSPEMG00000024572 Ar (ENSPEMG00000000264) ENSPEMG00000024504 Ophn1 (ENSPEMG00000000716) Yipf6 (ENSPEMG00000006259) Stard8 (ENSPEMG00000006401) Efnb1 (ENSPEMG00000029561) Pja1 (ENSPEMG00000018003) Nalf2 (ENSPEMG00000015427) Eda (ENSPEMG00000012939) Awat2 (ENSPEMG00000012556) Otud6a (ENSPEMG00000008684) Igbp1 (ENSPEMG00000007101) Lagomorpha ANCESTRAL SPECIES 29 ENSGT00940000159872 #9 ENSGT00940000153432.A.b #10 ENSGT00940000159814 #11 ENSGT00940000153499.a #12 ENSGT00940000160474 ENSGT00510000047648 ENSGT00940000155805 #14 ENSGT00940000157302 #15 ENSGT00390000002428.a.g.b ENSGT01030000234539.a.a.b.b #16 ENSGT01030000234535.C #17 ENSGT00390000018830 #18 ENSGT00940000156997 #19 ENSGT00390000016167 #20 ENSGT00390000006029 #21 ENSGT00550000074846 #22 ENSGT00940000158788 #23 ENSGT00390000007354 #24 ENSGT01080000257333.E.o.a #25 ENSGT00390000018729.a.a #26 ENSGT00390000018729.a.b #27 ENSGT00940000158784 #28 ENSGT00940000159026 #29 ENSGT00940000161402 #30 ENSGT00940000156943 #32 ENSGT00940000158673 #33 ENSGT00390000011152 #34 ENSGT00390000018344 #35 ENSGT00940000154807.b #36 ENSGT00940000157051 ENSGT00390000000916 Rabbit DUPLICATION Rabbit MODERN SPECIES 20 CTIF (ENSOCUG00000024842) #10 ENSOCUG00000026631 ZBTB7C (ENSOCUG00000022348) #11 SMAD2 (ENSOCUG00000011290) #12 ENSOCUG00000027573 IER3IP1 (ENSOCUG00000012555) HDHD2 (ENSOCUG00000006979) #14 ENSOCUG00000035984 ENSOCUG00000006940 KATNAL2 (ENSOCUG00000006971) #15 PIAS2 (ENSOCUG00000006900) #16 ENSOCUG00000033989 #18 RNF165 (ENSOCUG00000011801) #19 C18orf25 (ENSOCUG00000009573) #20 HAUS1 (ENSOCUG00000017483) #21 ENSOCUG00000003967 #22 PSTPIP2 (ENSOCUG00000000324) #23 EPG5 (ENSOCUG00000003950) #24 SIGLEC15 (ENSOCUG00000023340) #25 SLC14A1 (ENSOCUG00000006758) #26 ENSOCUG00000006749 #27 SETBP1 (ENSOCUG00000009706) #28 SYT4 (ENSOCUG00000009669) #29 RIT2 (ENSOCUG00000003652) #30 PIK3C3 (ENSOCUG00000009451) #32 ENSOCUG00000039403 ENSOCUG00000014048 ENSOCUG00000036229 ENSOCUG00000035744 CELF4 (ENSOCUG00000024790) #33 ENSOCUG00000022319 Rabbit MODERN SPECIES 15 TMTC2 (ENSOCUG00000017847) SLC6A15 (ENSOCUG00000014066) TSPAN19 (ENSOCUG00000037319) ENSOCUG00000034706 LRRIQ1 (ENSOCUG00000017527) ALX1 (ENSOCUG00000009125) ENSOCUG00000036577 RASSF9 (ENSOCUG00000017872) NTS (ENSOCUG00000010336) MGAT4C (ENSOCUG00000017314) ENSOCUG00000034843 #31 ENSOCUG00000034779 ENSOCUG00000023687 ENSOCUG00000038571 ENSOCUG00000027442 ENSOCUG00000027647 #22 ENSOCUG00000037685 ENSOCUG00000037227 C12orf50 (ENSOCUG00000004280) C12orf29 (ENSOCUG00000004284) CEP290 (ENSOCUG00000004290) TMTC3 (ENSOCUG00000004320) KITLG (ENSOCUG00000017687) DUSP6 (ENSOCUG00000002902) POC1B (ENSOCUG00000008219) ENSOCUG00000012940 ATP2B1 (ENSOCUG00000016507) ENSOCUG00000030126 #31 CCER1 (ENSOCUG00000013386) EPYC (ENSOCUG00000013389) KERA (ENSOCUG00000013394) Pika MODERN SPECIES 2238 ST8SIA5 (ENSOPRG00000005661) #17 LOXHD1 (ENSOPRG00000005624) #18 RNF165 (ENSOPRG00000005612) #19 ENSOPRG00000005601 C18orf25 (ENSOPRG00000005591) #20 HAUS1 (ENSOPRG00000005574) #21 ATP5F1A (ENSOPRG00000005543) #22 PSTPIP2 (ENSOPRG00000005522) #23 Tree shrew MODERN SPECIES 2563 ENSTBEG00000002259 #22