Sciuridae	ANCESTRAL SPECIES	31	ENSGT00940000159872	ENSGT00940000153432.A.b	ENSGT00940000159814	ENSGT00940000153499.a	ENSGT00940000160474	ENSGT00510000047648	ENSGT00940000155805	ENSGT00390000002428.a.g.b	ENSGT00940000157302	ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT00390000006029 #21	ENSGT00550000074846.z #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a #25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #28	ENSGT00940000159026 #29	ENSGT00940000161402 #30	ENSGT00940000156943 #31	ENSGT00940000158673 #32	ENSGT00390000011152 #33	ENSGT00940000164615 #34	ENSGT00390000018344 #35	ENSGT00940000154807.b #36	ENSGT00940000157051
Marmotini	ANCESTRAL SPECIES	31	ENSGT00940000159872	ENSGT00940000153432.A.b	ENSGT00940000159814	ENSGT00940000153499.a	ENSGT01030000236530	ENSGT00940000160474	ENSGT00510000047648	ENSGT00940000155805	ENSGT00940000157302	ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT00390000006029 #21	ENSGT00550000074846.z #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a #25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #28	ENSGT00940000159026 #29	ENSGT00940000161402 #30	ENSGT00940000156943 #31	ENSGT00940000158673 #32	ENSGT00390000011152 #33	ENSGT00940000164615 #34	ENSGT00390000018344 #35	ENSGT00940000154807.b #36	ENSGT00940000157051
Marmotini_b	ANCESTRAL SPECIES	137										ENSGT01030000234539.a.a.b.b #16	ENSGT01030000234535.C #17	ENSGT00390000018830 #18	ENSGT00940000156997 #19	ENSGT00390000016167 #20	ENSGT00390000006029 #21	ENSGT00550000074846.z #22	ENSGT00940000158788 #23	ENSGT00390000007354 #24	ENSGT01080000257333.E.o.a #25	ENSGT00390000018729.a.a #26	ENSGT00390000018729.a.b #27	ENSGT00940000158784 #28	ENSGT00940000159026 #29	ENSGT00940000161402 #30	ENSGT00940000156943 #31	ENSGT00940000158673 #32	ENSGT00390000011152 #33	ENSGT00940000164615 #34	ENSGT00390000018344 #35	ENSGT00940000154807.b #36	ENSGT00940000157051
Squirrel	MODERN SPECIES	117										PIAS2 (ENSSTOG00000014612) #16	ST8SIA5 (ENSSTOG00000027926) #17	LOXHD1 (ENSSTOG00000023476) #18	RNF165 (ENSSTOG00000023324) #19	C18orf25 (ENSSTOG00000006376) #20	HAUS1 (ENSSTOG00000003708) #21	ATP5F1A (ENSSTOG00000003680) #22	PSTPIP2 (ENSSTOG00000003652) #23	EPG5 (ENSSTOG00000021864) #24	SIGLEC15 (ENSSTOG00000002555) #25	SLC14A1 (ENSSTOG00000002535) #26	SLC14A2 (ENSSTOG00000002511) #27	SETBP1 (ENSSTOG00000002563) #28	SYT4 (ENSSTOG00000009215) #29	RIT2 (ENSSTOG00000027357) #30	PIK3C3 (ENSSTOG00000013565) #31	ENSSTOG00000009698 #32	ENSSTOG00000030096 #33	ENSSTOG00000031930 #34	TPGS2 (ENSSTOG00000011053) #35	FHOD3 (ENSSTOG00000024002) #36	ENSSTOG00000020333 #37
Arctic ground squirrel	MODERN SPECIES	622								PIAS2 (ENSUPAG00010010887) #16	ST8SIA5 (ENSUPAG00010010865) #17	LOXHD1 (ENSUPAG00010010785) #18	ENSUPAG00010010781 #19	ENSUPAG00010010778	C18orf25 (ENSUPAG00010010766) #20	ENSUPAG00010010762	ENSUPAG00010010754 #21	ATP5F1A (ENSUPAG00010010740) #22
Alpin marmot	MODERN SPECIES	10	C18orf32 (ENSMMMG00000006157)	DYM (ENSMMMG00000006170)	SMAD7 (ENSMMMG00000006202)	CTIF (ENSMMMG00000006232)	ZBTB7C (ENSMMMG00000006278)	SMAD2 (ENSMMMG00000006290)	ENSMMMG00000006338	HDHD2 (ENSMMMG00000006342)	KATNAL2 (ENSMMMG00000006351)	PIAS2 (ENSMMMG00000006515) #16	ST8SIA5 (ENSMMMG00000006633) #17	LOXHD1 (ENSMMMG00000006669) #18	RNF165 (ENSMMMG00000006757) #19	C18orf25 (ENSMMMG00000006777) #20	HAUS1 (ENSMMMG00000006810) #21	ATP5F1A (ENSMMMG00000006823) #22	PSTPIP2 (ENSMMMG00000006839) #23	EPG5 (ENSMMMG00000006854) #24	SIGLEC15 (ENSMMMG00000006905) #25	SLC14A1 (ENSMMMG00000006914) #26	SLC14A2 (ENSMMMG00000006939) #27	SETBP1 (ENSMMMG00000006996) #28	SYT4 (ENSMMMG00000007022) #29	RIT2 (ENSMMMG00000007046) #30	ENSMMMG00000007059	PIK3C3 (ENSMMMG00000007071) #31	CELF4 (ENSMMMG00000007204) #32	KIAA1328 (ENSMMMG00000007270) #33	TPGS2 (ENSMMMG00000007348) #35	FHOD3 (ENSMMMG00000007376) #36	ENSMMMG00000007438
Eurasian red squirrel	MODERN SPECIES	4	SMAD7 (ENSSVLG00005019787)	CTIF (ENSSVLG00005019619)	ZBTB7C (ENSSVLG00005019433)	ENSSVLG00005019379	SKOR2 (ENSSVLG00005019180)	ENSSVLG00005019150	HDHD2 (ENSSVLG00005019073)	ENSSVLG00005019019	KATNAL2 (ENSSVLG00005018737)	ENSSVLG00005018588 #16	ST8SIA5 (ENSSVLG00005018346) #17	LOXHD1 (ENSSVLG00005016724) #18	RNF165 (ENSSVLG00005016476) #19	C18orf25 (ENSSVLG00005016394) #20	HAUS1 (ENSSVLG00005016339) #21	ATP5F1A (ENSSVLG00005016277) #22	ENSSVLG00005016239	PSTPIP2 (ENSSVLG00005016011) #23	EPG5 (ENSSVLG00005015968) #24	SIGLEC15 (ENSSVLG00005015863) #25	SLC14A1 (ENSSVLG00005015590) #26	ENSSVLG00005015418 #27	SETBP1 (ENSSVLG00005015356) #28	ENSSVLG00005015263	SYT4 (ENSSVLG00005021147) #29	RIT2 (ENSSVLG00005020975) #30	ENSSVLG00005020916	PIK3C3 (ENSSVLG00005020640) #31	CELF4 (ENSSVLG00005019912) #32	KIAA1328 (ENSSVLG00005019689) #33	TPGS2 (ENSSVLG00005019531) #35