Euarchontoglires_A ANCESTRAL SPECIES 14 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000162300 ENSGT00940000162393 ENSGT00940000154447 #37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 Glires ANCESTRAL SPECIES 13 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000162300 ENSGT00940000162393 ENSGT00940000154447 #37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 Rodentia ANCESTRAL SPECIES 15 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.z #37 ENSGT00940000162300 ENSGT00940000162393 ENSGT00940000154447.y.a ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 Rodentia_A ANCESTRAL SPECIES 14 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000162300 ENSGT00940000162393 ENSGT00940000154447.z #37 ENSGT00940000161705 ENSGT01030000234543.A.a ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n Hystricomorpha ANCESTRAL SPECIES 8 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.z.e.b #35 ENSGT00940000154447.z.e.a #36 ENSGT00940000154447.z.f #37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n Naked mole-rat female MODERN SPECIES 23 MRPL53 (ENSHGLG00000040604) #7 CCDC142 (ENSHGLG00000008633) #8 ENSHGLG00000033871 #9 ENSHGLG00000036953 #10 LBX2 (ENSHGLG00000047185) #11 PCGF1 (ENSHGLG00000033144) #12 TLX2 (ENSHGLG00000005792) #13 DQX1 (ENSHGLG00000011994) #14 AUP1 (ENSHGLG00000013187) #15 HTRA2 (ENSHGLG00000009744) #16 LOXL3 (ENSHGLG00000006170) #17 DOK1 (ENSHGLG00000005074) #18 M1AP (ENSHGLG00000004860) #19 SEMA4F (ENSHGLG00000009042) #20 ENSHGLG00000035045 #21 HK2 (ENSHGLG00000005907) #22 POLE4 (ENSHGLG00000047239) #23 TACR1 (ENSHGLG00000045416) #24 EVA1A (ENSHGLG00000040877) #25 MRPL19 (ENSHGLG00000042011) #26 GCFC2 (ENSHGLG00000008801) #27 ENSHGLG00000015398 #28 ENSHGLG00000015346 #29 ENSHGLG00000034056 #30 ENSHGLG00000038719 #31 ENSHGLG00000034955 #32 ENSHGLG00000008716 #33 ENSHGLG00000047665 #34 ENSHGLG00000034192 #35 ENSHGLG00000008059 #36 ENSHGLG00000007734 #37 Hystricomorpha_a ANCESTRAL SPECIES 35 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.z.e.b #35 ENSGT00940000154447.z.e.a #36 ENSGT00940000154447.z.f #37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n Guinea pig MODERN SPECIES 37 WBP1 (ENSCPOG00000037016) MOGS (ENSCPOG00000026010) MRPL53 (ENSCPOG00000035123) #7 CCDC142 (ENSCPOG00000023486) #8 TTC31 (ENSCPOG00000024373) #10 LBX2 (ENSCPOG00000012727) #11 PCGF1 (ENSCPOG00000012729) #12 TLX2 (ENSCPOG00000019512) #13 DQX1 (ENSCPOG00000022849) #14 AUP1 (ENSCPOG00000025054) #15 HTRA2 (ENSCPOG00000012732) #16 LOXL3 (ENSCPOG00000023961) #17 DOK1 (ENSCPOG00000038650) #18 M1AP (ENSCPOG00000008912) #19 SEMA4F (ENSCPOG00000005867) #20 HK2 (ENSCPOG00000009174) #22 POLE4 (ENSCPOG00000036220) #23 TACR1 (ENSCPOG00000036008) #24 EVA1A (ENSCPOG00000031202) #25 MRPL19 (ENSCPOG00000024548) #26 GCFC2 (ENSCPOG00000002225) #27 LRRTM4 (ENSCPOG00000012033) #28 ENSCPOG00000020711 #35 ENSCPOG00000014439 #36 ENSCPOG00000004885 #37 ENSCPOG00000032214 LRRTM1 (ENSCPOG00000001371) CTNNA2 (ENSCPOG00000023564) SUCLG1 (ENSCPOG00000003017) DNAH6 (ENSCPOG00000015041) KCMF1 (ENSCPOG00000023050) Hystricomorpha_b ANCESTRAL SPECIES 33 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.z.e.b #35 ENSGT00940000154447.z.e.a #36 ENSGT00940000154447.z.f #37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171.n Degu MODERN SPECIES 99 INO80B (ENSODEG00000011186) WBP1 (ENSODEG00000011560) MOGS (ENSODEG00000014368) CCDC142 (ENSODEG00000014496) #8 LBX2 (ENSODEG00000011284) #11 PCGF1 (ENSODEG00000011844) #12 TLX2 (ENSODEG00000012439) #13 DQX1 (ENSODEG00000012521) #14 AUP1 (ENSODEG00000011987) #15 HTRA2 (ENSODEG00000011661) #16 LOXL3 (ENSODEG00000011550) #17 DOK1 (ENSODEG00000011592) #18 M1AP (ENSODEG00000012536) #19 SEMA4F (ENSODEG00000010194) #20 ENSODEG00000019770 HK2 (ENSODEG00000011759) #22 POLE4 (ENSODEG00000010898) #23 TACR1 (ENSODEG00000013525) #24 EVA1A (ENSODEG00000011258) #25 MRPL19 (ENSODEG00000011430) #26 GCFC2 (ENSODEG00000010845) #27 ENSODEG00000011878 LRRTM4 (ENSODEG00000012374) #28 ENSODEG00000012041 #35 ENSODEG00000011079 #36 ENSODEG00000011827 #37 CTNNA2 (ENSODEG00000014222) LRRTM1 (ENSODEG00000011057) Long-tailed chinchilla MODERN SPECIES 131 MRPL53 (ENSCLAG00000005239) #7 CCDC142 (ENSCLAG00000014185) #8 TTC31 (ENSCLAG00000014144) #10 MOGS (ENSCLAG00000013829) LBX2 (ENSCLAG00000014921) #11 PCGF1 (ENSCLAG00000005785) #12 TLX2 (ENSCLAG00000004657) #13 DQX1 (ENSCLAG00000007521) #14 AUP1 (ENSCLAG00000006421) #15 HTRA2 (ENSCLAG00000007086) #16 LOXL3 (ENSCLAG00000006711) #17 DOK1 (ENSCLAG00000006260) #18 M1AP (ENSCLAG00000005763) #19 SEMA4F (ENSCLAG00000005573) #20 ENSCLAG00000006297 HK2 (ENSCLAG00000005143) #22 POLE4 (ENSCLAG00000004786) #23 TACR1 (ENSCLAG00000004754) #24 EVA1A (ENSCLAG00000004417) #25 MRPL19 (ENSCLAG00000016582) #26 GCFC2 (ENSCLAG00000012347) #27 LRRTM4 (ENSCLAG00000007091) #28 ENSCLAG00000006062 ENSCLAG00000005804 #35 ENSCLAG00000006327 #36 ENSCLAG00000005858 #37 LRRTM1 (ENSCLAG00000005364) CTNNA2 (ENSCLAG00000013755) ENSCLAG00000009325 SUCLG1 (ENSCLAG00000008580) DNAH6 (ENSCLAG00000006035) Sciuridae ANCESTRAL SPECIES 16 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110.f #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000162300 ENSGT00940000162393 ENSGT00940000154447.z #37 ENSGT00940000154447.y.a ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00510000047171.m.b Eurasian red squirrel DUPLICATION Eurasian red squirrel MODERN SPECIES 5 MOGS (ENSSVLG00005024731) MRPL53 (ENSSVLG00005024756) #7 CCDC142 (ENSSVLG00005024776) #8 TTC31 (ENSSVLG00005024821) #10 LBX2 (ENSSVLG00005024879) #11 PCGF1 (ENSSVLG00005024907) #12 TLX2 (ENSSVLG00005024935) #13 DQX1 (ENSSVLG00005024974) #14 AUP1 (ENSSVLG00005024996) #15 HTRA2 (ENSSVLG00005025033) #16 LOXL3 (ENSSVLG00005025127) #17 DOK1 (ENSSVLG00005015837) #18 M1AP (ENSSVLG00005015919) #19 SEMA4F (ENSSVLG00005016158) #20 ENSSVLG00005016309 ENSSVLG00005016338 #22 ENSSVLG00005016623 ENSSVLG00005016659 POLE4 (ENSSVLG00005016692) #23 TACR1 (ENSSVLG00005016729) #24 ENSSVLG00005016813 EVA1A (ENSSVLG00005016866) #25 MRPL19 (ENSSVLG00005016907) #26 GCFC2 (ENSSVLG00005017041) #27 ENSSVLG00005017247 ENSSVLG00005017312 LRRTM4 (ENSSVLG00005017369) #28 ENSSVLG00005017508 REG1A (ENSSVLG00005017633) ENSSVLG00005017714 #37 ENSSVLG00005017804 #37 Eurasian red squirrel MODERN SPECIES 11 ENSSVLG00005007350 ENSSVLG00005007323 FRMD6 (ENSSVLG00005007280) ENSSVLG00005007247 RTRAF (ENSSVLG00005007221) NID2 (ENSSVLG00005007195) PTGDR (ENSSVLG00005007172) ENSSVLG00005007151 PTGER2 (ENSSVLG00005007122) TXNDC16 (ENSSVLG00005007046) GPR137C (ENSSVLG00005006997) ERO1A (ENSSVLG00005006953) PSMC6 (ENSSVLG00005006842) STYX (ENSSVLG00005006759) GNPNAT1 (ENSSVLG00005006714) ENSSVLG00005006693 #22 FERMT2 (ENSSVLG00005006620) ENSSVLG00005006589 DDHD1 (ENSSVLG00005006359) ENSSVLG00005006333 ENSSVLG00005006320 CDKN3 (ENSSVLG00005006189) CNIH1 (ENSSVLG00005006051) ENSSVLG00005005962 ENSSVLG00005005906 SAMD4A (ENSSVLG00005005855) ENSSVLG00005005811 ENSSVLG00005004501 WDHD1 (ENSSVLG00005004416) SOCS4 (ENSSVLG00005004401) ENSSVLG00005004383 Marmotini ANCESTRAL SPECIES 79 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110.f #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000162393 ENSGT00940000154447.z #37 ENSGT00940000154447.y.a ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00510000047171.m.b ENSGT00940000163007 Marmotini_b ANCESTRAL SPECIES 130 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000161036.A #10 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110.f #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000162393 ENSGT00940000154447.y.a ##37 ENSGT01030000234543.A.a ENSGT00940000161705 Arctic ground squirrel MODERN SPECIES 185 WBP1 (ENSUPAG00010016718) MOGS (ENSUPAG00010016709) MRPL53 (ENSUPAG00010016700) #7 CCDC142 (ENSUPAG00010016686) #8 TTC31 (ENSUPAG00010016656) #10 LBX2 (ENSUPAG00010016649) #11 PCGF1 (ENSUPAG00010016615) #12 TLX2 (ENSUPAG00010016603) #13 DQX1 (ENSUPAG00010016586) #14 AUP1 (ENSUPAG00010016560) #15 HTRA2 (ENSUPAG00010016515) #16 LOXL3 (ENSUPAG00010016491) #17 DOK1 (ENSUPAG00010016478) #18 M1AP (ENSUPAG00010016450) #19 SEMA4F (ENSUPAG00010016418) #20 HK2 (ENSUPAG00010016363) #22 POLE4 (ENSUPAG00010016344) #23 TACR1 (ENSUPAG00010016322) #24 ENSUPAG00010016313 EVA1A (ENSUPAG00010016304) #25 ENSUPAG00010016294 #26 GCFC2 (ENSUPAG00010016015) #27 ENSUPAG00010016007 LRRTM4 (ENSUPAG00010015987) #28 Squirrel MODERN SPECIES 156 WBP1 (ENSSTOG00000025943) MOGS (ENSSTOG00000026661) MRPL53 (ENSSTOG00000001025) #7 CCDC142 (ENSSTOG00000001028) #8 TTC31 (ENSSTOG00000001033) #10 LBX2 (ENSSTOG00000019987) #11 PCGF1 (ENSSTOG00000001040) #12 TLX2 (ENSSTOG00000001045) #13 DQX1 (ENSSTOG00000026252) #14 AUP1 (ENSSTOG00000001051) #15 HTRA2 (ENSSTOG00000001063) #16 LOXL3 (ENSSTOG00000001072) #17 DOK1 (ENSSTOG00000001076) #18 M1AP (ENSSTOG00000001080) #19 SEMA4F (ENSSTOG00000001082) #20 HK2 (ENSSTOG00000002437) #22 POLE4 (ENSSTOG00000030120) #23 TACR1 (ENSSTOG00000011077) #24 EVA1A (ENSSTOG00000021469) #25 MRPL19 (ENSSTOG00000002873) #26 GCFC2 (ENSSTOG00000024464) #27 ENSSTOG00000024435 LRRTM4 (ENSSTOG00000001717) #28 REG1A (ENSSTOG00000003573) ENSSTOG00000001662 ##37 ENSSTOG00000021505 LRRTM1 (ENSSTOG00000028545) ENSSTOG00000026194 Alpin marmot MODERN SPECIES 64 WBP1 (ENSMMMG00000004707) MOGS (ENSMMMG00000004720) ENSMMMG00000004733 #7 CCDC142 (ENSMMMG00000004738) #8 ENSMMMG00000004752 #10 LBX2 (ENSMMMG00000004780) #11 PCGF1 (ENSMMMG00000004790) #12 TLX2 (ENSMMMG00000004825) #13 DQX1 (ENSMMMG00000004834) #14 AUP1 (ENSMMMG00000004858) #15 HTRA2 (ENSMMMG00000004896) #16 LOXL3 (ENSMMMG00000004988) #17 DOK1 (ENSMMMG00000005037) #18 M1AP (ENSMMMG00000005048) #19 SEMA4F (ENSMMMG00000005082) #20 HK2 (ENSMMMG00000005126) #22 POLE4 (ENSMMMG00000005188) #23 TACR1 (ENSMMMG00000005201) #24 EVA1A (ENSMMMG00000005216) #25 MRPL19 (ENSMMMG00000005228) #26 GCFC2 (ENSMMMG00000005247) #27 LRRTM4 (ENSMMMG00000005273) #28 ENSMMMG00000005287 #37 REG1A (ENSMMMG00000005302) ENSMMMG00000005338 #37 ENSMMMG00000005359 ##37 CTNNA2 (ENSMMMG00000005377) LRRTM1 (ENSMMMG00000005631) ENSMMMG00000005652 ENSMMMG00000005682 ENSMMMG00000005696 Rodentia_B ANCESTRAL SPECIES 14 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a ##37 ENSGT00940000162393 ENSGT00940000162300 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 ENSGT00510000047171 Myomorpha ANCESTRAL SPECIES 37 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393 ENSGT00940000162300 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000163007 Muroidea ANCESTRAL SPECIES 38 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393 ENSGT00940000162300 ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 Muroidea_A ANCESTRAL SPECIES 4 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000162300 ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 Cricetidae ANCESTRAL SPECIES 3 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000162300 ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 Cricetidae_B ANCESTRAL SPECIES 10 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.b ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j ENSGT00940000156351 Prairie vole MODERN SPECIES 83 Ino80b (ENSMOCG00000020754) Wbp1 (ENSMOCG00000005967) Mogs (ENSMOCG00000000117) Mrpl53 (ENSMOCG00000015167) #7 Ccdc142 (ENSMOCG00000015304) #8 Lbx2 (ENSMOCG00000002385) #11 Pcgf1 (ENSMOCG00000001359) #12 Tlx2 (ENSMOCG00000011667) #13 Dqx1 (ENSMOCG00000017871) #14 Aup1 (ENSMOCG00000021809) #15 Htra2 (ENSMOCG00000003555) #16 Loxl3 (ENSMOCG00000011718) #17 Dok1 (ENSMOCG00000021462) #18 M1ap (ENSMOCG00000009481) #19 Sema4f (ENSMOCG00000014077) #20 Hk2 (ENSMOCG00000019865) #22 Pole4 (ENSMOCG00000016768) #23 Tacr1 (ENSMOCG00000006018) #24 Eva1a (ENSMOCG00000012884) #25 ENSMOCG00000018596 #26 Gcfc2 (ENSMOCG00000017779) #27 ENSMOCG00000000151 Lrrtm4 (ENSMOCG00000008317) #28 ENSMOCG00000015470 ENSMOCG00000003469 Reg3g (ENSMOCG00000000838) ##37 Reg2 (ENSMOCG00000019434) Reg3b (ENSMOCG00000000127) ##37 ENSMOCG00000019395 Lrrtm1 (ENSMOCG00000015921) ENSMOCG00000016382 Northern American deer mouse MODERN SPECIES 16 Ino80b (ENSPEMG00000006161) Wbp1 (ENSPEMG00000010594) Mogs (ENSPEMG00000008417) Mrpl53 (ENSPEMG00000008725) #7 Ccdc142 (ENSPEMG00000014703) #8 Lbx2 (ENSPEMG00000011990) #11 Pcgf1 (ENSPEMG00000017121) #12 Tlx2 (ENSPEMG00000010782) #13 Dqx1 (ENSPEMG00000000695) #14 Aup1 (ENSPEMG00000008201) #15 Htra2 (ENSPEMG00000015428) #16 Loxl3 (ENSPEMG00000015153) #17 Dok1 (ENSPEMG00000010752) #18 M1ap (ENSPEMG00000011948) #19 Sema4f (ENSPEMG00000008768) #20 Hk2 (ENSPEMG00000022631) #22 Pole4 (ENSPEMG00000028015) #23 Tacr1 (ENSPEMG00000023294) #24 Eva1a (ENSPEMG00000026422) #25 Mrpl19 (ENSPEMG00000024632) #26 Gcfc2 (ENSPEMG00000005238) #27 ENSPEMG00000030656 Lrrtm4 (ENSPEMG00000019651) #28 ENSPEMG00000001831 Reg3g (ENSPEMG00000019588) ##37 ENSPEMG00000011894 Reg3a (ENSPEMG00000000477) ##37 ENSPEMG00000014440 ##37 Reg3b (ENSPEMG00000009322) ##37 Lrrtm1 (ENSPEMG00000019466) ENSPEMG00000024773 Cricetinae ANCESTRAL SPECIES 8 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000162300 ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00390000018097.j Chinese hamster chok1gshd MODERN SPECIES 242 Wbp1 (ENSCGRG00001009466) Mrpl53 (ENSCGRG00001012557) #7 Ccdc142 (ENSCGRG00001020073) #8 Lbx2 (ENSCGRG00001000433) #11 Pcgf1 (ENSCGRG00001002493) #12 Tlx2 (ENSCGRG00001008627) #13 Dqx1 (ENSCGRG00001011093) #14 Aup1 (ENSCGRG00001013091) #15 Htra2 (ENSCGRG00001000338) #16 Loxl3 (ENSCGRG00001010598) #17 Dok1 (ENSCGRG00001006719) #18 M1ap (ENSCGRG00001011175) #19 ENSCGRG00001015764 Sema4f (ENSCGRG00001016218) #20 ENSCGRG00001020271 Hk2 (ENSCGRG00001002061) #22 Pole4 (ENSCGRG00001013295) #23 Tacr1 (ENSCGRG00001015125) #24 ENSCGRG00001019682 Eva1a (ENSCGRG00001001093) #25 Mrpl19 (ENSCGRG00001002468) #26 Gcfc2 (ENSCGRG00001004931) #27 ENSCGRG00001015827 Lrrtm4 (ENSCGRG00001012847) #28 ENSCGRG00001014116 ENSCGRG00001015880 ENSCGRG00001016319 Reg3g (ENSCGRG00001014964) ##37 Reg1 (ENSCGRG00001015288) Reg2 (ENSCGRG00001016071) ENSCGRG00001016649 Golden Hamster MODERN SPECIES 698 Wbp1 (ENSMAUG00000022150) Mogs (ENSMAUG00000021939) Mrpl53 (ENSMAUG00000010618) #7 Ccdc142 (ENSMAUG00000017920) #8 Lbx2 (ENSMAUG00000001333) #11 Pcgf1 (ENSMAUG00000019230) #12 Tlx2 (ENSMAUG00000018780) #13 Dqx1 (ENSMAUG00000022113) #14 Aup1 (ENSMAUG00000012161) #15 Htra2 (ENSMAUG00000012010) #16 Loxl3 (ENSMAUG00000001931) #17 Dok1 (ENSMAUG00000022023) #18 M1ap (ENSMAUG00000010825) #19 Sema4f (ENSMAUG00000009786) #20 ENSMAUG00000010231 Hk2 (ENSMAUG00000020920) #22 Pole4 (ENSMAUG00000002015) #23 Tacr1 (ENSMAUG00000016810) #24 Eva1a (ENSMAUG00000013107) #25 Mrpl19 (ENSMAUG00000011327) #26 Gcfc2 (ENSMAUG00000021915) #27 Lrrtm4 (ENSMAUG00000021688) #28 ENSMAUG00000020837 Reg3gamma (ENSMAUG00000013518) ##37 Reg2 (ENSMAUG00000000796) ENSMAUG00000009913 ##37 Reg3d (ENSMAUG00000001387) ##37 Reg3b (ENSMAUG00000004298) ##37 ENSMAUG00000015429 Lrrtm1 (ENSMAUG00000020167) ENSMAUG00000011430 Murinae ANCESTRAL SPECIES 4 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j Mus ANCESTRAL SPECIES 12 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j Mus_A ANCESTRAL SPECIES 7 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00390000018097.j Mus_B ANCESTRAL SPECIES 15 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00950000184960 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 Mouse MODERN SPECIES 15 Ino80b (ENSMUSG00000030034) Wbp1 (ENSMUSG00000030035) Mogs (ENSMUSG00000030036) Mrpl53 (ENSMUSG00000030037) #7 Ccdc142 (ENSMUSG00000107499) #8 Lbx2 (ENSMUSG00000034968) #11 Pcgf1 (ENSMUSG00000069678) #12 Tlx2 (ENSMUSG00000068327) #13 Dqx1 (ENSMUSG00000009145) #14 Aup1 (ENSMUSG00000068328) #15 Htra2 (ENSMUSG00000068329) #16 Loxl3 (ENSMUSG00000000693) #17 Dok1 (ENSMUSG00000068335) #18 M1ap (ENSMUSG00000030041) #19 Sema4f (ENSMUSG00000000627) #20 Hk2 (ENSMUSG00000000628) #22 Pole4 (ENSMUSG00000030042) #23 Tacr1 (ENSMUSG00000030043) #24 Eva1a (ENSMUSG00000035104) #25 Mrpl19 (ENSMUSG00000030045) #26 Gcfc2 (ENSMUSG00000035125) #27 Lrrtm4 (ENSMUSG00000052581) #28 Gm20594 (ENSMUSG00000096887) Reg3g (ENSMUSG00000030017) ##37 Reg1 (ENSMUSG00000059654) Reg2 (ENSMUSG00000023140) Reg3a (ENSMUSG00000079516) ##37 Reg3d (ENSMUSG00000068341) ##37 Reg3b (ENSMUSG00000071356) ##37 Lrrtm1 (ENSMUSG00000060780) Ctnna2 (ENSMUSG00000063063) Mus_C ANCESTRAL SPECIES 18 ENSGT00390000001754 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000160888 #23 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154909 #28 ENSGT00950000184960 ENSGT00940000154447.y.a.a ##37 ENSGT00940000162393.a ENSGT00940000162393.b ENSGT00940000154447.y.b.b ##37 ENSGT00940000154447.y.b.a ##37 ENSGT00940000154447.y.a.b ##37 ENSGT01030000234543.A.a ENSGT00940000161705 spretus MODERN SPECIES 15 Wbp1 (MGP_SPRETEiJ_G0029552) Mogs (MGP_SPRETEiJ_G0029551) Mrpl53 (MGP_SPRETEiJ_G0029550) #7 MGP_SPRETEiJ_G0029549 #8 MGP_SPRETEiJ_G0029548 #8 Lbx2 (MGP_SPRETEiJ_G0029547) #11 Pcgf1 (MGP_SPRETEiJ_G0029546) #12 Tlx2 (MGP_SPRETEiJ_G0029545) #13 MGP_SPRETEiJ_G0029544 #14 Aup1 (MGP_SPRETEiJ_G0029543) #15 Htra2 (MGP_SPRETEiJ_G0029542) #16 Loxl3 (MGP_SPRETEiJ_G0029541) #17 Dok1 (MGP_SPRETEiJ_G0029540) #18 M1ap (MGP_SPRETEiJ_G0029539) #19 Sema4f (MGP_SPRETEiJ_G0029538) #20 Hk2 (MGP_SPRETEiJ_G0029537) #22 Pole4 (MGP_SPRETEiJ_G0029536) #23 Tacr1 (MGP_SPRETEiJ_G0029535) #24 Eva1a (MGP_SPRETEiJ_G0029534) #25 Mrpl19 (MGP_SPRETEiJ_G0029533) #26 Gcfc2 (MGP_SPRETEiJ_G0029532) #27 Lrrtm4 (MGP_SPRETEiJ_G0029531) #28 Gm20594 (MGP_SPRETEiJ_G0029530) Reg3g (MGP_SPRETEiJ_G0029529) ##37 Reg1 (MGP_SPRETEiJ_G0029528) Reg2 (MGP_SPRETEiJ_G0029527) Reg3a (MGP_SPRETEiJ_G0029526) ##37 Reg3d (MGP_SPRETEiJ_G0029525) ##37 Reg3b (MGP_SPRETEiJ_G0029524) ##37 Lrrtm1 (MGP_SPRETEiJ_G0029523) Ctnna2 (MGP_SPRETEiJ_G0029522) Steppe mouse MODERN SPECIES 3332 Hk2 (ENSMSIG00000021677) #22 Pole4 (ENSMSIG00000021737) #23 Tacr1 (ENSMSIG00000021757) #24 Eva1a (ENSMSIG00000021770) #25 Mrpl19 (ENSMSIG00000021780) #26 Gcfc2 (ENSMSIG00000021791) #27 Lrrtm4 (ENSMSIG00000021825) #28 Gm20594 (ENSMSIG00000021837) ENSMSIG00000021840 ENSMSIG00000021860 ##37 Ryukyu mouse MODERN SPECIES 15 Wbp1 (MGP_CAROLIEiJ_G0028546) Mogs (MGP_CAROLIEiJ_G0028545) Mrpl53 (MGP_CAROLIEiJ_G0028544) #7 MGP_CAROLIEiJ_G0028543 #8 MGP_CAROLIEiJ_G0028542 #8 Lbx2 (MGP_CAROLIEiJ_G0028541) #11 Pcgf1 (MGP_CAROLIEiJ_G0028540) #12 Tlx2 (MGP_CAROLIEiJ_G0028539) #13 MGP_CAROLIEiJ_G0028538 #14 Aup1 (MGP_CAROLIEiJ_G0028537) #15 Htra2 (MGP_CAROLIEiJ_G0028536) #16 Loxl3 (MGP_CAROLIEiJ_G0028535) #17 Dok1 (MGP_CAROLIEiJ_G0028534) #18 M1ap (MGP_CAROLIEiJ_G0028533) #19 Sema4f (MGP_CAROLIEiJ_G0028532) #20 Hk2 (MGP_CAROLIEiJ_G0028531) #22 Pole4 (MGP_CAROLIEiJ_G0028530) #23 Tacr1 (MGP_CAROLIEiJ_G0028529) #24 Eva1a (MGP_CAROLIEiJ_G0028528) #25 Mrpl19 (MGP_CAROLIEiJ_G0028527) #26 Gcfc2 (MGP_CAROLIEiJ_G0028526) #27 Lrrtm4 (MGP_CAROLIEiJ_G0028525) #28 Reg3g (MGP_CAROLIEiJ_G0028524) ##37 Reg1 (MGP_CAROLIEiJ_G0028523) Reg2 (MGP_CAROLIEiJ_G0028522) Reg3a (MGP_CAROLIEiJ_G0028521) ##37 Reg3d (MGP_CAROLIEiJ_G0028520) ##37 Reg3b (MGP_CAROLIEiJ_G0028519) ##37 Lrrtm1 (MGP_CAROLIEiJ_G0028518) Ctnna2 (MGP_CAROLIEiJ_G0028517) Jkampl (MGP_CAROLIEiJ_G0028516) Shrew mouse MODERN SPECIES 11 Wbp1 (MGP_PahariEiJ_G0022281) Mogs (MGP_PahariEiJ_G0022280) Mrpl53 (MGP_PahariEiJ_G0022279) #7 MGP_PahariEiJ_G0022278 #8 MGP_PahariEiJ_G0022277 #8 Lbx2 (MGP_PahariEiJ_G0022276) #11 Pcgf1 (MGP_PahariEiJ_G0022275) #12 Tlx2 (MGP_PahariEiJ_G0022274) #13 Dqx1 (MGP_PahariEiJ_G0022273) #14 Aup1 (MGP_PahariEiJ_G0022272) #15 Htra2 (MGP_PahariEiJ_G0022271) #16 Loxl3 (MGP_PahariEiJ_G0022270) #17 Dok1 (MGP_PahariEiJ_G0022269) #18 M1ap (MGP_PahariEiJ_G0022268) #19 Sema4f (MGP_PahariEiJ_G0022267) #20 Hk2 (MGP_PahariEiJ_G0022266) #22 Pole4 (MGP_PahariEiJ_G0022265) #23 Tacr1 (MGP_PahariEiJ_G0022264) #24 Eva1a (MGP_PahariEiJ_G0022263) #25 Mrpl19 (MGP_PahariEiJ_G0022262) #26 Gcfc2 (MGP_PahariEiJ_G0022261) #27 Lrrtm4 (MGP_PahariEiJ_G0022260) #28 Reg3g (MGP_PahariEiJ_G0022259) ##37 Reg1 (MGP_PahariEiJ_G0022258) Reg2 (MGP_PahariEiJ_G0022257) Reg3a (MGP_PahariEiJ_G0022256) ##37 MGP_PahariEiJ_G0022255 Reg3b (MGP_PahariEiJ_G0022254) ##37 Lrrtm1 (MGP_PahariEiJ_G0022253) Ctnna2 (MGP_PahariEiJ_G0022252) Jkampl (MGP_PahariEiJ_G0022251) Rat MODERN SPECIES 14 Rtkn (ENSRNOG00000009022) Ino80b (ENSRNOG00000008873) Wbp1 (ENSRNOG00000008720) Mogs (ENSRNOG00000054176) Ccdc142 (ENSRNOG00000058785) #8 Lbx2 (ENSRNOG00000008466) #11 Pcgf1 (ENSRNOG00000051433) #12 Tlx2 (ENSRNOG00000055188) #13 Dqx1 (ENSRNOG00000008062) #14 Aup1 (ENSRNOG00000007842) #15 Htra2 (ENSRNOG00000022448) #16 Loxl3 (ENSRNOG00000061373) #17 Dok1 (ENSRNOG00000007412) #18 M1ap (ENSRNOG00000007288) #19 Sema4f (ENSRNOG00000006784) #20 Hk2 (ENSRNOG00000006116) #22 Pole4 (ENSRNOG00000006102) #23 Tacr1 (ENSRNOG00000005853) #24 ENSRNOG00000063971 Eva1a (ENSRNOG00000007118) #25 Mrpl19 (ENSRNOG00000006968) #26 Gcfc2 (ENSRNOG00000006888) #27 AABR07061254.1 (ENSRNOG00000038024) ENSRNOG00000064641 Lrrtm4 (ENSRNOG00000021938) #28 Reg3g (ENSRNOG00000006579) ##37 Reg1a (ENSRNOG00000006486) Reg3a (ENSRNOG00000006360) ##37 Reg3b (ENSRNOG00000006151) ##37 LRRTM1 (ENSRNOG00000006093) Ctnna2 (ENSRNOG00000006003) Upper Galilee mountains blind mole rat MODERN SPECIES 1871 Ino80b (ENSNGAG00000001416) Wbp1 (ENSNGAG00000016758) Mogs (ENSNGAG00000018314) Mrpl53 (ENSNGAG00000001052) #7 Ccdc142 (ENSNGAG00000017389) #8 Lbx2 (ENSNGAG00000004590) #11 Pcgf1 (ENSNGAG00000023164) #12 Tlx2 (ENSNGAG00000022815) #13 Dqx1 (ENSNGAG00000022609) #14 Aup1 (ENSNGAG00000021192) #15 Htra2 (ENSNGAG00000020588) #16 ENSNGAG00000007181 #17 Dok1 (ENSNGAG00000004316) #18 M1ap (ENSNGAG00000024114) #19 Sema4f (ENSNGAG00000022767) #20 Hk2 (ENSNGAG00000013722) #22 Egr4 (ENSNGAG00000002193) Fbxo41 (ENSNGAG00000019168) Cct7 (ENSNGAG00000018805) Pradc1 (ENSNGAG00000022973) Smyd5 (ENSNGAG00000011517) Noto (ENSNGAG00000005430) Rab11fip5 (ENSNGAG00000015746) Sfxn5 (ENSNGAG00000022575) Emx1 (ENSNGAG00000019661) ENSNGAG00000019431 ENSNGAG00000022373 ENSNGAG00000012614 Exoc6b (ENSNGAG00000022129) Cyp26b1 (ENSNGAG00000012506) Dysf (ENSNGAG00000021698) Lesser Egyptian jerboa MODERN SPECIES 77 Jph1 (ENSJJAG00000014118) Gdap1 (ENSJJAG00000014819) ENSJJAG00000008907 Pi15 (ENSJJAG00000017870) ENSJJAG00000016188 Hnf4g (ENSJJAG00000024184) Zfhx4 (ENSJJAG00000022978) Pex2 (ENSJJAG00000006470) Pkia (ENSJJAG00000021457) Zc2hc1a (ENSJJAG00000015487) Il7 (ENSJJAG00000020747) Hk2 (ENSJJAG00000023582) #22 Tacr1 (ENSJJAG00000009094) #24 Eva1a (ENSJJAG00000000520) #25 Mrpl19 (ENSJJAG00000011449) #26 Gcfc2 (ENSJJAG00000020797) #27 ENSJJAG00000021250 ENSJJAG00000016811 Lrrtm4 (ENSJJAG00000014862) #28 ENSJJAG00000004619 ENSJJAG00000024137 ##37 ENSJJAG00000004867 ##37 ENSJJAG00000023603 ENSJJAG00000020877 Lrrtm1 (ENSJJAG00000021646) Ctnna2 (ENSJJAG00000020758) ENSJJAG00000014736 Kangaroo rat MODERN SPECIES 509 Ino80b (ENSDORG00000016185) Wbp1 (ENSDORG00000019752) Mogs (ENSDORG00000016186) ENSDORG00000016187 Ccdc142 (ENSDORG00000025374) #8 Lbx2 (ENSDORG00000010863) #11 Pcgf1 (ENSDORG00000010860) #12 Tlx2 (ENSDORG00000010859) #13 Dqx1 (ENSDORG00000013672) #14 Aup1 (ENSDORG00000013678) #15 Htra2 (ENSDORG00000013684) #16 Loxl3 (ENSDORG00000013687) #17 Dok1 (ENSDORG00000013690) #18 M1ap (ENSDORG00000013692) #19 Sema4f (ENSDORG00000014340) #20 Hk2 (ENSDORG00000006463) #22 Pole4 (ENSDORG00000010725) #23 Tacr1 (ENSDORG00000006212) #24 Eva1a (ENSDORG00000023980) #25 Mrpl19 (ENSDORG00000007011) #26 Gcfc2 (ENSDORG00000007015) #27 ENSDORG00000023277 Lrrtm4 (ENSDORG00000024289) #28 Lagomorpha ANCESTRAL SPECIES 47 ENSGT00940000167728 ENSGT00950000183109.d ENSGT00390000017452 ENSGT00390000001440 #7 ENSGT00390000009871 #8 ENSGT00940000162295 #11 ENSGT00940000159651 #12 ENSGT00940000162452 #13 ENSGT00940000159579 #14 ENSGT00390000016110 #15 ENSGT00940000155108 #16 ENSGT00940000158157 #17 ENSGT00940000155980.C #18 ENSGT00390000005656 #19 ENSGT00940000159592 #20 ENSGT00950000182787.C #22 ENSGT00940000153745.a #24 ENSGT00940000154096.b.b.b.a #25 ENSGT00390000009415 #26 ENSGT00390000000455.b #27 ENSGT00940000154447.`b #37 ENSGT00940000162393 ENSGT00940000154447.ab #37 ENSGT01030000234543.A.a ENSGT00940000161705 ENSGT00940000156351 ENSGT00940000154761 ENSGT00940000162805 ENSGT00940000163007 ENSGT00510000047171 ENSGT00940000157038 Rabbit MODERN SPECIES 11 ENSOCUG00000039031 WBP1 (ENSOCUG00000015323) ENSOCUG00000015328 ENSOCUG00000015342 #7 CCDC142 (ENSOCUG00000015350) #8 LBX2 (ENSOCUG00000025427) #11 PCGF1 (ENSOCUG00000015358) #12 TLX2 (ENSOCUG00000015369) #13 DQX1 (ENSOCUG00000015372) #14 AUP1 (ENSOCUG00000015388) #15 HTRA2 (ENSOCUG00000015403) #16 LOXL3 (ENSOCUG00000027040) #17 DOK1 (ENSOCUG00000004656) #18 M1AP (ENSOCUG00000004664) #19 SEMA4F (ENSOCUG00000004668) #20 HK2 (ENSOCUG00000000197) #22 ENSOCUG00000031334 ENSOCUG00000022792 TACR1 (ENSOCUG00000001006) #24 EVA1A (ENSOCUG00000011295) #25 MRPL19 (ENSOCUG00000001712) #26 GCFC2 (ENSOCUG00000001715) #27 ENSOCUG00000022879 LRRTM4 (ENSOCUG00000011833) #28 ENSOCUG00000026249 ENSOCUG00000015884 #37 REG1A (ENSOCUG00000027194) ENSOCUG00000005632 #37 ENSOCUG00000030492 LRRTM1 (ENSOCUG00000005244) ENSOCUG00000035825 Pika MODERN SPECIES 2559 HK2 (ENSOPRG00000005838) #22 Tree shrew MODERN SPECIES 2885 HK2 (ENSTBEG00000014904) #22