Gnathostomata ANCESTRAL SPECIES 71 ENSGT00390000017892 #7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00940000157654 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821 #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES 24 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00940000157654 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000157140.a ENSGT00640000091523 #16 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 Sarcopterygii ANCESTRAL SPECIES 81 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000154396.a ENSGT00390000000375 ENSGT00940000161373 Tetrapoda ANCESTRAL SPECIES 2 ENSGT00390000017892 #7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154396.a ENSGT00390000000375 Amniota ANCESTRAL SPECIES 4 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Mammalia ANCESTRAL SPECIES 24 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 Theria ANCESTRAL SPECIES 30 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 Eutheria ANCESTRAL SPECIES 7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Boreoeutheria ANCESTRAL SPECIES 10 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Euarchontoglires ANCESTRAL SPECIES 10 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Euarchontoglires_A ANCESTRAL SPECIES 10 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Glires ANCESTRAL SPECIES 9 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Rodentia ANCESTRAL SPECIES 9 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Rodentia_B ANCESTRAL SPECIES 6 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Myomorpha ANCESTRAL SPECIES 1 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Muroidea ANCESTRAL SPECIES 1 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Muroidea_A ANCESTRAL SPECIES ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Murinae ANCESTRAL SPECIES ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Mus ANCESTRAL SPECIES ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00900000143396 #23 ENSGT00940000155460 #24 ENSGT00520000061590 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Shrew mouse MODERN SPECIES Ptar1 (MGP_PahariEiJ_G0014318) #7 Apba1 (MGP_PahariEiJ_G0014319) #8 Entrep1 (MGP_PahariEiJ_G0014320) #9 Tjp2 (MGP_PahariEiJ_G0014321) #10 MGP_PahariEiJ_G0014322 #11 Fam122a (MGP_PahariEiJ_G0014324) #12 Tmem252 (MGP_PahariEiJ_G0014325) #13 Pgm5 (MGP_PahariEiJ_G0014326) #14 Foxd4 (MGP_PahariEiJ_G0014327) #15 Cbwd1 (MGP_PahariEiJ_G0014328) #16 Dock8 (MGP_PahariEiJ_G0014329) #17 Kank1 (MGP_PahariEiJ_G0014330) #18 Dmrt1 (MGP_PahariEiJ_G0014331) #19 Dmrt3 (MGP_PahariEiJ_G0014332) #20 Dmrt2 (MGP_PahariEiJ_G0014333) #21 Smarca2 (MGP_PahariEiJ_G0014334) #22 MGP_PahariEiJ_G0014335 #23 Vldlr (MGP_PahariEiJ_G0014336) #24 Kcnv2 (MGP_PahariEiJ_G0014337) #25 Pum3 (MGP_PahariEiJ_G0014338) #26 Rfx3 (MGP_PahariEiJ_G0014339) #27 Glis3 (MGP_PahariEiJ_G0014340) #28 Slc1a1 (MGP_PahariEiJ_G0014341) #29 Spata6l (MGP_PahariEiJ_G0014342) #30 Plpp6 (MGP_PahariEiJ_G0014343) #31 Cdc37l1 (MGP_PahariEiJ_G0014344) #32 Ak3 (MGP_PahariEiJ_G0014345) #33 Rcl1 (MGP_PahariEiJ_G0014346) #34 Jak2 (MGP_PahariEiJ_G0014347) #35 Insl6 (MGP_PahariEiJ_G0014348) #36 Rln1 (MGP_PahariEiJ_G0014349) #37 Mus_A ANCESTRAL SPECIES 16 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00900000143396 #23 ENSGT00940000155460 #24 ENSGT00520000061590 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Mus_B ANCESTRAL SPECIES 16 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00900000143396 #23 ENSGT00940000155460 #24 ENSGT00520000061590 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Mus_C ANCESTRAL SPECIES 24 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00900000143396 #23 ENSGT00940000155460 #24 ENSGT00520000061590 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Steppe mouse MODERN SPECIES 3106 Smarca2 (ENSMSIG00000022131) #22 Gm815 (ENSMSIG00000023064) #23 Vldlr (ENSMSIG00000023084) #24 ENSMSIG00000023160 Kcnv2 (ENSMSIG00000023184) #25 Pum3 (ENSMSIG00000023194) #26 Rfx3 (ENSMSIG00000023245) #27 ENSMSIG00000023373 Glis3 (ENSMSIG00000023382) #28 spretus MODERN SPECIES 10 MGP_SPRETEiJ_G0023744 Apba1 (MGP_SPRETEiJ_G0023745) #8 Entrep1 (MGP_SPRETEiJ_G0023746) #9 Tjp2 (MGP_SPRETEiJ_G0023747) #10 Fxn (MGP_SPRETEiJ_G0023748) #11 Pip5k1b (MGP_SPRETEiJ_G0023749) Fam122a (MGP_SPRETEiJ_G0023750) #12 Tmem252 (MGP_SPRETEiJ_G0023751) #13 Pgm5 (MGP_SPRETEiJ_G0023752) #14 Foxd4 (MGP_SPRETEiJ_G0023753) #15 Cbwd1 (MGP_SPRETEiJ_G0023754) #16 Dock8 (MGP_SPRETEiJ_G0023755) #17 Kank1 (MGP_SPRETEiJ_G0023756) #18 Dmrt3 (MGP_SPRETEiJ_G0023757) #20 Dmrt2 (MGP_SPRETEiJ_G0023758) #21 Smarca2 (MGP_SPRETEiJ_G0023759) #22 MGP_SPRETEiJ_G0023760 #23 Vldlr (MGP_SPRETEiJ_G0023761) #24 Kcnv2 (MGP_SPRETEiJ_G0023762) #25 Pum3 (MGP_SPRETEiJ_G0023763) #26 Rfx3 (MGP_SPRETEiJ_G0023764) #27 Glis3 (MGP_SPRETEiJ_G0023765) #28 Slc1a1 (MGP_SPRETEiJ_G0023766) #29 Spata6l (MGP_SPRETEiJ_G0023767) #30 Plpp6 (MGP_SPRETEiJ_G0023768) #31 Cdc37l1 (MGP_SPRETEiJ_G0023769) #32 Ak3 (MGP_SPRETEiJ_G0023770) #33 Rcl1 (MGP_SPRETEiJ_G0023771) #34 Jak2 (MGP_SPRETEiJ_G0023772) #35 Insl6 (MGP_SPRETEiJ_G0023773) #36 Rln1 (MGP_SPRETEiJ_G0023774) #37 Mouse MODERN SPECIES 10 Entrep1 (ENSMUSG00000071604) #9 Tjp2 (ENSMUSG00000024812) #10 Fxn (ENSMUSG00000059363) #11 Pip5k1b (ENSMUSG00000024867) Fam122a (ENSMUSG00000074922) #12 Tmem252 (ENSMUSG00000048572) #13 Pgm5 (ENSMUSG00000041731) #14 Gm10053 (ENSMUSG00000058927) Foxd4 (ENSMUSG00000051490) #15 Cbwd1 (ENSMUSG00000024878) #16 Dock8 (ENSMUSG00000052085) #17 Kank1 (ENSMUSG00000032702) #18 Dmrt1 (ENSMUSG00000024837) #19 Dmrt3 (ENSMUSG00000042372) #20 Dmrt2 (ENSMUSG00000048138) #21 Smarca2 (ENSMUSG00000024921) #22 Gm815 (ENSMUSG00000074913) #23 Vldlr (ENSMUSG00000024924) #24 Kcnv2 (ENSMUSG00000047298) #25 Pum3 (ENSMUSG00000041360) #26 Rfx3 (ENSMUSG00000040929) #27 Glis3 (ENSMUSG00000052942) #28 Slc1a1 (ENSMUSG00000024935) #29 Spata6l (ENSMUSG00000064202) #30 Plpp6 (ENSMUSG00000040105) #31 Cdc37l1 (ENSMUSG00000024780) #32 Ak3 (ENSMUSG00000024782) #33 Rcl1 (ENSMUSG00000024785) #34 Jak2 (ENSMUSG00000024789) #35 Insl6 (ENSMUSG00000050957) #36 Rln1 (ENSMUSG00000039097) #37 Ryukyu mouse MODERN SPECIES 10 Apba1 (MGP_CAROLIEiJ_G0022826) #8 Entrep1 (MGP_CAROLIEiJ_G0022827) #9 Tjp2 (MGP_CAROLIEiJ_G0022828) #10 Fxn (MGP_CAROLIEiJ_G0022829) #11 Pip5k1b (MGP_CAROLIEiJ_G0022830) Fam122a (MGP_CAROLIEiJ_G0022831) #12 Tmem252 (MGP_CAROLIEiJ_G0022832) #13 Pgm5 (MGP_CAROLIEiJ_G0022833) #14 Foxd4 (MGP_CAROLIEiJ_G0022834) #15 Cbwd1 (MGP_CAROLIEiJ_G0022835) #16 Dock8 (MGP_CAROLIEiJ_G0022836) #17 Kank1 (MGP_CAROLIEiJ_G0022837) #18 Dmrt1 (MGP_CAROLIEiJ_G0022838) #19 Dmrt3 (MGP_CAROLIEiJ_G0022839) #20 Dmrt2 (MGP_CAROLIEiJ_G0022840) #21 Smarca2 (MGP_CAROLIEiJ_G0022841) #22 MGP_CAROLIEiJ_G0022842 #23 Vldlr (MGP_CAROLIEiJ_G0022843) #24 Kcnv2 (MGP_CAROLIEiJ_G0022844) #25 Pum3 (MGP_CAROLIEiJ_G0022845) #26 Rfx3 (MGP_CAROLIEiJ_G0022846) #27 Glis3 (MGP_CAROLIEiJ_G0022847) #28 Slc1a1 (MGP_CAROLIEiJ_G0022848) #29 Spata6l (MGP_CAROLIEiJ_G0022849) #30 Plpp6 (MGP_CAROLIEiJ_G0022850) #31 Cdc37l1 (MGP_CAROLIEiJ_G0022851) #32 Ak3 (MGP_CAROLIEiJ_G0022852) #33 Rcl1 (MGP_CAROLIEiJ_G0022853) #34 Jak2 (MGP_CAROLIEiJ_G0022854) #35 Insl6 (MGP_CAROLIEiJ_G0022855) #36 Rln1 (MGP_CAROLIEiJ_G0022856) #37 Rat MODERN SPECIES Tjp2 (ENSRNOG00000015030) #10 Fxn (ENSRNOG00000015213) #11 Pip5k1b (ENSRNOG00000015232) Pabir1 (ENSRNOG00000051051) #12 Tmem252 (ENSRNOG00000025476) #13 Pgm5 (ENSRNOG00000015406) #14 Foxd4 (ENSRNOG00000050486) #15 Zng1a (ENSRNOG00000015516) #16 Dock8 (ENSRNOG00000015894) #17 Hmgb1-ps4 (ENSRNOG00000065098) Kank1 (ENSRNOG00000016023) #18 Dmrt1 (ENSRNOG00000016075) #19 Dmrt3 (ENSRNOG00000016284) #20 Dmrt2 (ENSRNOG00000016301) #21 ENSRNOG00000062555 Smarca2 (ENSRNOG00000011931) #22 ENSRNOG00000069446 Vldlr (ENSRNOG00000027491) #24 ENSRNOG00000062591 Kcnv2 (ENSRNOG00000012566) #25 Pum3 (ENSRNOG00000012574) #26 Rfx3 (ENSRNOG00000014486) #27 ENSRNOG00000066761 Glis3 (ENSRNOG00000014768) #28 Slc1a1 (ENSRNOG00000014816) #29 ENSRNOG00000065811 Spata6l (ENSRNOG00000015137) #30 Plpp6 (ENSRNOG00000015268) #31 RGD1565057 (ENSRNOG00000069618) Cdc37l1 (ENSRNOG00000010967) #32 Ak3 (ENSRNOG00000052506) #33 Cricetidae ANCESTRAL SPECIES 1 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Cricetidae_B ANCESTRAL SPECIES 1 ENSGT00390000017892 #7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Northern American deer mouse MODERN SPECIES Ptar1 (ENSPEMG00000018036) #7 Apba1 (ENSPEMG00000010980) #8 Entrep1 (ENSPEMG00000020060) #9 Tjp2 (ENSPEMG00000020250) #10 ENSPEMG00000019884 #11 Pip5k1b (ENSPEMG00000020095) Fam122a (ENSPEMG00000012823) #12 Tmem252 (ENSPEMG00000007137) #13 Pgm5 (ENSPEMG00000020205) #14 Cbwd1 (ENSPEMG00000000396) #16 Dock8 (ENSPEMG00000014001) #17 Kank1 (ENSPEMG00000013916) #18 Dmrt1 (ENSPEMG00000019943) #19 Dmrt3 (ENSPEMG00000019990) #20 Dmrt2 (ENSPEMG00000019767) #21 Smarca2 (ENSPEMG00000019821) #22 ENSPEMG00000021666 Vldlr (ENSPEMG00000022250) #24 Kcnv2 (ENSPEMG00000020138) #25 ENSPEMG00000030423 ENSPEMG00000019340 #26 Rfx3 (ENSPEMG00000019731) #27 Glis3 (ENSPEMG00000020002) #28 ENSPEMG00000004286 Slc1a1 (ENSPEMG00000009611) #29 ENSPEMG00000021571 Spata6l (ENSPEMG00000023122) #30 Plpp6 (ENSPEMG00000007181) #31 Cdc37l1 (ENSPEMG00000000344) #32 Ak3 (ENSPEMG00000022781) #33 Rcl1 (ENSPEMG00000023275) #34 Prairie vole MODERN SPECIES 16 Apba1 (ENSMOCG00000009892) #8 Entrep1 (ENSMOCG00000018310) #9 Tjp2 (ENSMOCG00000012468) #10 Fxn (ENSMOCG00000014625) #11 Pip5k1b (ENSMOCG00000017594) ENSMOCG00000010285 Fam122a (ENSMOCG00000001051) #12 Tmem252 (ENSMOCG00000017938) #13 Pgm5 (ENSMOCG00000011710) #14 Cbwd1 (ENSMOCG00000015974) #16 Dock8 (ENSMOCG00000014249) #17 Kank1 (ENSMOCG00000020725) #18 ENSMOCG00000017971 #19 Dmrt3 (ENSMOCG00000015270) #20 Dmrt2 (ENSMOCG00000016701) #21 Smarca2 (ENSMOCG00000001611) #22 Vldlr (ENSMOCG00000004269) #24 Kcnv2 (ENSMOCG00000014872) #25 ENSMOCG00000019519 #26 Rfx3 (ENSMOCG00000018931) #27 Glis3 (ENSMOCG00000009953) #28 Slc1a1 (ENSMOCG00000017507) #29 ENSMOCG00000018225 Spata6l (ENSMOCG00000022082) #30 Plpp6 (ENSMOCG00000001135) #31 Cdc37l1 (ENSMOCG00000018341) #32 Ak3 (ENSMOCG00000010856) #33 Rcl1 (ENSMOCG00000012145) #34 Jak2 (ENSMOCG00000013580) #35 Insl6 (ENSMOCG00000015208) #36 Rln1 (ENSMOCG00000012108) #37 Cricetinae ANCESTRAL SPECIES 2 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Chinese hamster chok1gshd MODERN SPECIES 401 Entrep1 (ENSCGRG00001002309) #9 Tjp2 (ENSCGRG00001022408) #10 Fxn (ENSCGRG00001003906) #11 ENSCGRG00001013409 Pip5k1b (ENSCGRG00001017408) Fam122a (ENSCGRG00001012685) #12 Tmem252 (ENSCGRG00001019081) #13 Pgm5 (ENSCGRG00001020037) #14 Foxd4 (ENSCGRG00001006276) #15 Cbwd1 (ENSCGRG00001020851) #16 Dock8 (ENSCGRG00001013079) #17 Kank1 (ENSCGRG00001020355) #18 Dmrt1 (ENSCGRG00001000625) #19 Dmrt3 (ENSCGRG00001005036) #20 Dmrt2 (ENSCGRG00001007562) #21 Smarca2 (ENSCGRG00001002323) #22 Vldlr (ENSCGRG00001014399) #24 ENSCGRG00001017895 Kcnv2 (ENSCGRG00001018140) #25 Pum3 (ENSCGRG00001016402) #26 Rfx3 (ENSCGRG00001021745) #27 Glis3 (ENSCGRG00001014233) #28 Slc1a1 (ENSCGRG00001022336) #29 ENSCGRG00001023585 Spata6l (ENSCGRG00001002881) #30 Plpp6 (ENSCGRG00001012981) #31 Cdc37l1 (ENSCGRG00001000264) #32 AK3 (ENSCGRG00001007296) #33 Rcl1 (ENSCGRG00001013748) #34 Jak2 (ENSCGRG00001015840) #35 Insl6 (ENSCGRG00001020673) #36 Golden Hamster DUPLICATION Golden Hamster DUPLICATION Golden Hamster MODERN SPECIES 617 Tjp2 (ENSMAUG00000008987) #10 Fxn (ENSMAUG00000009158) #11 Pip5k1b (ENSMAUG00000010912) Fam122a (ENSMAUG00000002386) #12 Tmem252 (ENSMAUG00000008962) #13 Pgm5 (ENSMAUG00000009185) #14 Cbwd1 (ENSMAUG00000009107) #16 ENSMAUG00000009538 #17 ENSMAUG00000009191 #17 Kank1 (ENSMAUG00000009263) #18 ENSMAUG00000008975 #19 Dmrt3 (ENSMAUG00000008904) #20 Dmrt2 (ENSMAUG00000010038) #21 ENSMAUG00000010070 #22 ENSMAUG00000008807 #22 ENSMAUG00000008613 #22 ENSMAUG00000008768 Kcnv2 (ENSMAUG00000008727) #25 Pum3 (ENSMAUG00000009733) #26 Rfx3 (ENSMAUG00000009987) #27 Slc1a1 (ENSMAUG00000009046) #29 Plpp6 (ENSMAUG00000001915) #31 Spata6l (ENSMAUG00000010530) #30 Cdc37l1 (ENSMAUG00000008847) #32 Ak3 (ENSMAUG00000008253) #33 Rcl1 (ENSMAUG00000008922) #34 Jak2 (ENSMAUG00000008571) #35 Insl6 (ENSMAUG00000008553) #36 Rln1 (ENSMAUG00000008598) #37 Plgrkt (ENSMAUG00000007601) Cd274 (ENSMAUG00000008788) Golden Hamster MODERN SPECIES 617 Entrep1 (ENSMAUG00000010196) #9 Tjp2 (ENSMAUG00000008987) #10 Fxn (ENSMAUG00000009158) #11 Pip5k1b (ENSMAUG00000010912) Fam122a (ENSMAUG00000002386) #12 Tmem252 (ENSMAUG00000008962) #13 Pgm5 (ENSMAUG00000009185) #14 Cbwd1 (ENSMAUG00000009107) #16 ENSMAUG00000009538 #17 ENSMAUG00000009191 #17 Kank1 (ENSMAUG00000009263) #18 ENSMAUG00000008975 #19 Dmrt3 (ENSMAUG00000008904) #20 Dmrt2 (ENSMAUG00000010038) #21 ENSMAUG00000010070 #22 ENSMAUG00000008807 #22 ENSMAUG00000008613 #22 ENSMAUG00000008768 Kcnv2 (ENSMAUG00000008727) #25 Pum3 (ENSMAUG00000009733) #26 Rfx3 (ENSMAUG00000009987) #27 Slc1a1 (ENSMAUG00000009046) #29 Plpp6 (ENSMAUG00000001915) #31 Spata6l (ENSMAUG00000010530) #30 Cdc37l1 (ENSMAUG00000008847) #32 Ak3 (ENSMAUG00000008253) #33 Rcl1 (ENSMAUG00000008922) #34 Jak2 (ENSMAUG00000008571) #35 Insl6 (ENSMAUG00000008553) #36 Rln1 (ENSMAUG00000008598) #37 Plgrkt (ENSMAUG00000007601) Golden Hamster MODERN SPECIES 617 Apba1 (ENSMAUG00000009290) #8 Entrep1 (ENSMAUG00000010196) #9 Tjp2 (ENSMAUG00000008987) #10 Fxn (ENSMAUG00000009158) #11 Pip5k1b (ENSMAUG00000010912) Fam122a (ENSMAUG00000002386) #12 Tmem252 (ENSMAUG00000008962) #13 Pgm5 (ENSMAUG00000009185) #14 Cbwd1 (ENSMAUG00000009107) #16 ENSMAUG00000009538 #17 ENSMAUG00000009191 #17 Kank1 (ENSMAUG00000009263) #18 ENSMAUG00000008975 #19 Dmrt3 (ENSMAUG00000008904) #20 Dmrt2 (ENSMAUG00000010038) #21 ENSMAUG00000010070 #22 ENSMAUG00000008807 #22 ENSMAUG00000008613 #22 ENSMAUG00000008768 Kcnv2 (ENSMAUG00000008727) #25 Pum3 (ENSMAUG00000009733) #26 Rfx3 (ENSMAUG00000009987) #27 Slc1a1 (ENSMAUG00000009046) #29 Plpp6 (ENSMAUG00000001915) #31 Spata6l (ENSMAUG00000010530) #30 Cdc37l1 (ENSMAUG00000008847) #32 Ak3 (ENSMAUG00000008253) #33 Rcl1 (ENSMAUG00000008922) #34 Jak2 (ENSMAUG00000008571) #35 Insl6 (ENSMAUG00000008553) #36 Rln1 (ENSMAUG00000008598) #37 Upper Galilee mountains blind mole rat MODERN SPECIES 1166 Dmrt1 (ENSNGAG00000001295) #19 Dmrt3 (ENSNGAG00000020423) #20 Dmrt2 (ENSNGAG00000020041) #21 ENSNGAG00000013866 Smarca2 (ENSNGAG00000000108) #22 ENSNGAG00000012912 Vldlr (ENSNGAG00000003966) #24 Kcnv2 (ENSNGAG00000020439) #25 Pum3 (ENSNGAG00000019468) #26 Rfx3 (ENSNGAG00000016470) #27 Glis3 (ENSNGAG00000006111) #28 ENSNGAG00000018137 Slc1a1 (ENSNGAG00000014723) #29 Plpp6 (ENSNGAG00000014756) #31 Spata6l (ENSNGAG00000017948) #30 Cdc37l1 (ENSNGAG00000018155) #32 Ak3 (ENSNGAG00000016647) #33 Rcl1 (ENSNGAG00000015327) #34 Jak2 (ENSNGAG00000000096) #35 Lesser Egyptian jerboa MODERN SPECIES 50 Tjp2 (ENSJJAG00000003581) #10 Fxn (ENSJJAG00000022666) #11 Pip5k1b (ENSJJAG00000018154) Fam122a (ENSJJAG00000009421) #12 Tmem252 (ENSJJAG00000015659) #13 Pgm5 (ENSJJAG00000022690) #14 ENSJJAG00000013817 #16 ENSJJAG00000009646 #17 ENSJJAG00000017231 #17 ENSJJAG00000015498 #17 Kank1 (ENSJJAG00000018774) #18 Dmrt1 (ENSJJAG00000016690) #19 Dmrt3 (ENSJJAG00000022573) #20 Dmrt2 (ENSJJAG00000023959) #21 ENSJJAG00000010719 Smarca2 (ENSJJAG00000010867) #22 Vldlr (ENSJJAG00000016440) #24 ENSJJAG00000000409 Kcnv2 (ENSJJAG00000016782) #25 Pum3 (ENSJJAG00000012563) #26 ENSJJAG00000010263 Rfx3 (ENSJJAG00000010280) #27 ENSJJAG00000024335 Glis3 (ENSJJAG00000011399) #28 Slc1a1 (ENSJJAG00000018507) #29 ENSJJAG00000020462 Spata6l (ENSJJAG00000022941) #30 Plpp6 (ENSJJAG00000011277) #31 Cdc37l1 (ENSJJAG00000024330) #32 Ak3 (ENSJJAG00000023388) #33 ENSJJAG00000022803 #34 Kangaroo rat MODERN SPECIES 359 Mamdc2 (ENSDORG00000000884) Ptar1 (ENSDORG00000005855) #7 Apba1 (ENSDORG00000003149) #8 Entrep1 (ENSDORG00000001566) #9 Tjp2 (ENSDORG00000009039) #10 Fxn (ENSDORG00000027975) #11 Pip5k1b (ENSDORG00000001153) Fam122a (ENSDORG00000001152) #12 Tmem252 (ENSDORG00000005477) #13 Pgm5 (ENSDORG00000005476) #14 Cbwd1 (ENSDORG00000004917) #16 Dock8 (ENSDORG00000007203) #17 Kank1 (ENSDORG00000015159) #18 ENSDORG00000006363 #19 Dmrt2 (ENSDORG00000007216) #21 Smarca2 (ENSDORG00000014832) #22 Vldlr (ENSDORG00000012954) #24 Kcnv2 (ENSDORG00000011511) #25 ENSDORG00000003628 #26 Rfx3 (ENSDORG00000013906) #27 ENSDORG00000025494 #28 Slc1a1 (ENSDORG00000010091) #29 Plpp6 (ENSDORG00000003071) #31 Cdc37l1 (ENSDORG00000023648) #32 Ak3 (ENSDORG00000010355) #33 Rcl1 (ENSDORG00000015645) #34 Jak2 (ENSDORG00000011552) #35 ENSDORG00000000109 ENSDORG00000028062 Rodentia_A ANCESTRAL SPECIES 11 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Sciuridae ANCESTRAL SPECIES 6 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Marmotini ANCESTRAL SPECIES 1 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Marmotini_b ANCESTRAL SPECIES 88 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Squirrel MODERN SPECIES 103 TJP2 (ENSSTOG00000011181) #10 ENSSTOG00000033140 #11 PIP5K1B (ENSSTOG00000023540) PABIR1 (ENSSTOG00000022211) #12 TMEM252 (ENSSTOG00000008860) #13 PGM5 (ENSSTOG00000008834) #14 ENSSTOG00000029964 #15 ENSSTOG00000028764 #16 ENSSTOG00000031824 DOCK8 (ENSSTOG00000016411) #17 ENSSTOG00000030036 KANK1 (ENSSTOG00000010218) #18 DMRT1 (ENSSTOG00000010235) #19 DMRT3 (ENSSTOG00000023574) #20 DMRT2 (ENSSTOG00000026909) #21 SMARCA2 (ENSSTOG00000006812) #22 ENSSTOG00000031987 VLDLR (ENSSTOG00000006880) #24 KCNV2 (ENSSTOG00000020003) #25 PUM3 (ENSSTOG00000009586) #26 RFX3 (ENSSTOG00000006974) #27 GLIS3 (ENSSTOG00000000302) #28 ENSSTOG00000031708 SLC1A1 (ENSSTOG00000023583) #29 PLPP6 (ENSSTOG00000025831) #31 SPATA6L (ENSSTOG00000000018) #30 CDC37L1 (ENSSTOG00000000020) #32 AK3 (ENSSTOG00000000021) #33 RCL1 (ENSSTOG00000000023) #34 JAK2 (ENSSTOG00000006679) #35 ENSSTOG00000016298 #36 Arctic ground squirrel MODERN SPECIES 335 DMRT2 (ENSUPAG00010017350) #21 SMARCA2 (ENSUPAG00010016919) #22 ENSUPAG00010016900 VLDLR (ENSUPAG00010016811) #24 KCNV2 (ENSUPAG00010016794) #25 PUM3 (ENSUPAG00010016775) #26 Alpin marmot MODERN SPECIES 32 FXN (ENSMMMG00000003605) #11 PIP5K1B (ENSMMMG00000003495) PABIR1 (ENSMMMG00000003490) #12 TMEM252 (ENSMMMG00000003476) #13 PGM5 (ENSMMMG00000003460) #14 ENSMMMG00000003446 #15 ENSMMMG00000003411 #16 DOCK8 (ENSMMMG00000003328) #17 ENSMMMG00000003304 ENSMMMG00000003301 KANK1 (ENSMMMG00000003281) #18 DMRT1 (ENSMMMG00000003270) #19 DMRT3 (ENSMMMG00000003239) #20 DMRT2 (ENSMMMG00000003238) #21 ENSMMMG00000003212 SMARCA2 (ENSMMMG00000002811) #22 ENSMMMG00000002785 ENSMMMG00000002765 VLDLR (ENSMMMG00000002594) #24 ENSMMMG00000002572 KCNV2 (ENSMMMG00000002550) #25 PUM3 (ENSMMMG00000002513) #26 ENSMMMG00000002504 GLIS3 (ENSMMMG00000002430) #28 ENSMMMG00000002416 ENSMMMG00000002405 SLC1A1 (ENSMMMG00000002380) #29 SPATA6L (ENSMMMG00000002361) #30 PLPP6 (ENSMMMG00000002356) #31 CDC37L1 (ENSMMMG00000002322) #32 AK3 (ENSMMMG00000002286) #33 Eurasian red squirrel MODERN SPECIES 6 ENTREP1 (ENSSVLG00005022461) #9 TJP2 (ENSSVLG00005022528) #10 ENSSVLG00005022798 #11 PIP5K1B (ENSSVLG00005022876) PABIR1 (ENSSVLG00005023031) #12 TMEM252 (ENSSVLG00005023049) #13 PGM5 (ENSSVLG00005023081) #14 ENSSVLG00005023212 #15 ENSSVLG00005023230 #16 ENSSVLG00005023280 DOCK8 (ENSSVLG00005023344) #17 KANK1 (ENSSVLG00005023807) #18 DMRT1 (ENSSVLG00005023845) #19 DMRT3 (ENSSVLG00005023888) #20 DMRT2 (ENSSVLG00005023918) #21 SMARCA2 (ENSSVLG00005024009) #22 ENSSVLG00005024201 VLDLR (ENSSVLG00005024232) #24 KCNV2 (ENSSVLG00005024318) #25 PUM3 (ENSSVLG00005024338) #26 ENSSVLG00005024401 RFX3 (ENSSVLG00005024420) #27 GLIS3 (ENSSVLG00005024543) #28 SLC1A1 (ENSSVLG00005024569) #29 SPATA6L (ENSSVLG00005024615) #30 PLPP6 (ENSSVLG00005024689) #31 CDC37L1 (ENSSVLG00005024699) #32 ENSSVLG00005024721 #33 RCL1 (ENSSVLG00005024752) #34 JAK2 (ENSSVLG00005024808) #35 INSL6 (ENSSVLG00005024849) #36 Hystricomorpha ANCESTRAL SPECIES 46 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a.c.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Naked mole-rat female MODERN SPECIES 3 TMEM252 (ENSHGLG00000033131) #13 PGM5 (ENSHGLG00000013086) #14 ENSHGLG00000046909 #15 CBWD3 (ENSHGLG00000015962) #16 ENSHGLG00000020779 DOCK8 (ENSHGLG00000016578) #17 ENSHGLG00000050403 ENSHGLG00000045832 KANK1 (ENSHGLG00000012000) #18 DMRT1 (ENSHGLG00000043033) #19 DMRT3 (ENSHGLG00000012858) #20 ENSHGLG00000033430 #21 ENSHGLG00000036415 ENSHGLG00000035319 ENSHGLG00000013697 ENSHGLG00000005215 #22 ENSHGLG00000035043 ENSHGLG00000016566 VLDLR (ENSHGLG00000016113) #24 KCNV2 (ENSHGLG00000015810) #25 ENSHGLG00000015868 #26 ENSHGLG00000016314 ENSHGLG00000042585 ENSHGLG00000019207 ENSHGLG00000018913 #27 ENSHGLG00000015091 #28 ENSHGLG00000032696 ENSHGLG00000017534 SLC1A1 (ENSHGLG00000015155) #29 PLPP6 (ENSHGLG00000038858) #31 SPATA6L (ENSHGLG00000018477) #30 Hystricomorpha_a DUPLICATION Hystricomorpha_a DUPLICATION Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154821.b.c.a #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154821.b.c.a #22 Degu MODERN SPECIES 257 NEK3 (ENSODEG00000001087) CKAP2 (ENSODEG00000001025) VPS36 (ENSODEG00000000909) THSD1 (ENSODEG00000000849) ENSODEG00000000791 ENSODEG00000000772 ENSODEG00000000759 ENSODEG00000000752 FOXO1 (ENSODEG00000000747) ENSODEG00000000728 ENSODEG00000000717 #22 COG6 (ENSODEG00000003859) LHFPL6 (ENSODEG00000003836) ENSODEG00000003473 PROSER1 (ENSODEG00000003365) ENSODEG00000003312 ENSODEG00000003298 ENSODEG00000003236 TWSG1 (ENSODEG00000003220) RALBP1 (ENSODEG00000001763) PPP4R1 (ENSODEG00000001319) RAB31 (ENSODEG00000001085) VAPA (ENSODEG00000001065) APCDD1 (ENSODEG00000001023) ENSODEG00000000963 PIEZO2 (ENSODEG00000000546) Guinea pig MODERN SPECIES 13 ENSCPOG00000031141 ENSCPOG00000034500 TRDC (ENSCPOG00000000844) ENSCPOG00000033000 ENSCPOG00000040263 OR4E2 (ENSCPOG00000026054) OR10G2 (ENSCPOG00000039240) SALL2 (ENSCPOG00000040220) METTL3 (ENSCPOG00000002545) TOX4 (ENSCPOG00000025504) RAB2B (ENSCPOG00000026575) CHD8 (ENSCPOG00000002538) SUPT16H (ENSCPOG00000002534) RPGRIP1 (ENSCPOG00000002526) ENSCPOG00000001474 ENSCPOG00000035385 #22 TMEM253 (ENSCPOG00000031716) ZNF219 (ENSCPOG00000022085) ARHGEF40 (ENSCPOG00000012862) ENSCPOG00000034881 RNASE13 (ENSCPOG00000019970) TPPP2 (ENSCPOG00000023279) NDRG2 (ENSCPOG00000002625) ENSCPOG00000031550 ENSCPOG00000027335 ENSCPOG00000035683 ENSCPOG00000031798 ENSCPOG00000038384 ENSCPOG00000026584 ENSCPOG00000036707 OR6S1 (ENSCPOG00000011915) Hystricomorpha_a ANCESTRAL SPECIES ENSGT00940000154821.b.c.b #22 Hystricomorpha_b ANCESTRAL SPECIES ENSGT00940000154821.b.c.b #22 Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu DUPLICATION Degu MODERN SPECIES 76 ENSODEG00000015493 UPK3B (ENSODEG00000015729) DTX2 (ENSODEG00000015332) ENSODEG00000016251 SSC4D (ENSODEG00000015613) YWHAG (ENSODEG00000016579) HSPB1 (ENSODEG00000015698) ENSODEG00000016162 SRRM3 (ENSODEG00000015988) ENSODEG00000015859 ENSODEG00000020351 STYXL1 (ENSODEG00000015904) TMEM120A (ENSODEG00000015559) POR (ENSODEG00000015517) RHBDD2 (ENSODEG00000016225) ENSODEG00000015918 #22 ENSODEG00000015707 ENSODEG00000020305 CCL24 (ENSODEG00000015142) HIP1 (ENSODEG00000016265) ENSODEG00000015346 NSUN5 (ENSODEG00000015132) TRIM50 (ENSODEG00000015712) FKBP6 (ENSODEG00000016257) FZD9 (ENSODEG00000020544) BAZ1B (ENSODEG00000015361) BCL7B (ENSODEG00000015813) TBL2 (ENSODEG00000016440) MLXIPL (ENSODEG00000015218) ENSODEG00000015421 DNAJC30 (ENSODEG00000015782) Degu MODERN SPECIES 53 CDKN1B (ENSODEG00000012537) GPR19 (ENSODEG00000013191) CREBL2 (ENSODEG00000009860) ENSODEG00000019647 DUSP16 (ENSODEG00000009500) ENSODEG00000008969 MANSC1 (ENSODEG00000009259) LRP6 (ENSODEG00000008930) BCL2L14 (ENSODEG00000008991) ETV6 (ENSODEG00000009759) ENSODEG00000009522 ENSODEG00000008835 ENSODEG00000010368 ENSODEG00000009595 ENSODEG00000010351 ENSODEG00000009496 #22 ENSODEG00000009605 ENSODEG00000009202 CLEC12B (ENSODEG00000009413) CLEC1B (ENSODEG00000009886) CLEC1A (ENSODEG00000009200) CLEC7A (ENSODEG00000008833) TMEM52B (ENSODEG00000010426) GABARAPL1 (ENSODEG00000010037) ENSODEG00000009587 KLRD1 (ENSODEG00000010635) Degu MODERN SPECIES 47 ENSODEG00000007912 CC2D2A (ENSODEG00000008363) FBXL5 (ENSODEG00000009798) BST1 (ENSODEG00000008525) CD38 (ENSODEG00000008127) PROM1 (ENSODEG00000011756) TAPT1 (ENSODEG00000007601) LDB2 (ENSODEG00000010335) QDPR (ENSODEG00000009810) CLRN2 (ENSODEG00000009531) ENSODEG00000008724 MED28 (ENSODEG00000010235) FAM184B (ENSODEG00000008017) NCAPG (ENSODEG00000007988) ENSODEG00000007625 ENSODEG00000007550 #22 SLIT2 (ENSODEG00000011554) ENSODEG00000009142 KCNIP4 (ENSODEG00000009132) ADGRA3 (ENSODEG00000008912) GBA3 (ENSODEG00000007983) ENSODEG00000008409 ENSODEG00000008891 ENSODEG00000008421 LGI2 (ENSODEG00000009206) SEPSECS (ENSODEG00000010607) PI4K2B (ENSODEG00000008999) ENSODEG00000007449 ENSODEG00000006972 ENSODEG00000019525 SLC34A2 (ENSODEG00000010839) Degu MODERN SPECIES 48 ENSODEG00000013469 SLC10A1 (ENSODEG00000013278) ENSODEG00000014061 SMOC1 (ENSODEG00000012836) ENSODEG00000014278 SLC8A3 (ENSODEG00000013865) SYNJ2BP (ENSODEG00000014092) FLVCR2 (ENSODEG00000013854) ERG28 (ENSODEG00000013861) ENSODEG00000012504 ENSODEG00000013591 TGFB3 (ENSODEG00000013103) IFT43 (ENSODEG00000013768) ENSODEG00000012743 GPATCH2L (ENSODEG00000013474) ENSODEG00000013347 #22 ESRRB (ENSODEG00000013419) VASH1 (ENSODEG00000012506) ENSODEG00000019977 ANGEL1 (ENSODEG00000012416) LRRC74A (ENSODEG00000013756) CIPC (ENSODEG00000012302) ZDHHC22 (ENSODEG00000016163) TMEM63C (ENSODEG00000013078) ENSODEG00000011875 ENSODEG00000014820 POMT2 (ENSODEG00000012188) GSTZ1 (ENSODEG00000012019) TMED8 (ENSODEG00000012850) NOXRED1 (ENSODEG00000013652) VIPAS39 (ENSODEG00000013197) Degu MODERN SPECIES 173 ENSODEG00000019887 PRXL2A (ENSODEG00000012446) TSPAN14 (ENSODEG00000010478) SH2D4B (ENSODEG00000013141) NRG3 (ENSODEG00000011562) ENSODEG00000012959 ENSODEG00000011340 ENSODEG00000012481 CDHR1 (ENSODEG00000010766) LRIT2 (ENSODEG00000011609) LRIT1 (ENSODEG00000012611) RGR (ENSODEG00000011393) CCSER2 (ENSODEG00000010793) GRID1 (ENSODEG00000011958) ENSODEG00000011516 ENSODEG00000019892 #22 ENSODEG00000011721 OPN4 (ENSODEG00000011887) ENSODEG00000011383 ENSODEG00000019882 BMPR1A (ENSODEG00000011436) ENSODEG00000012425 SNCG (ENSODEG00000012548) ENSODEG00000012123 ENSODEG00000011593 SHLD2 (ENSODEG00000012114) ENSODEG00000020251 ENSODEG00000011514 ZNF488 (ENSODEG00000011943) RBP3 (ENSODEG00000012586) GDF2 (ENSODEG00000012030) Hystricomorpha_a ANCESTRAL SPECIES 53 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b.d #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a.c.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Hystricomorpha_b ANCESTRAL SPECIES 71 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489.n #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b.d #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00900000143153 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a.c.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Long-tailed chinchilla MODERN SPECIES 141 PTAR1 (ENSCLAG00000008830) #7 APBA1 (ENSCLAG00000006043) #8 ENTREP1 (ENSCLAG00000007506) #9 TJP2 (ENSCLAG00000012841) #10 FXN (ENSCLAG00000009225) #11 PIP5K1B (ENSCLAG00000011292) TMEM252 (ENSCLAG00000005523) #13 PGM5 (ENSCLAG00000005854) #14 ENSCLAG00000006762 #15 ENSCLAG00000005076 #16 DOCK8 (ENSCLAG00000005204) #17 KANK1 (ENSCLAG00000015509) #18 DMRT1 (ENSCLAG00000015238) #19 DMRT3 (ENSCLAG00000015537) #20 DMRT2 (ENSCLAG00000006168) #21 SMARCA2 (ENSCLAG00000014484) #22 VLDLR (ENSCLAG00000007543) #24 KCNV2 (ENSCLAG00000013226) #25 PUM3 (ENSCLAG00000011892) #26 RFX3 (ENSCLAG00000009044) #27 GLIS3 (ENSCLAG00000008116) #28 ENSCLAG00000009238 SLC1A1 (ENSCLAG00000009832) #29 ENSCLAG00000009476 SPATA6L (ENSCLAG00000010497) #30 PLPP6 (ENSCLAG00000017735) #31 CDC37L1 (ENSCLAG00000005805) #32 AK3 (ENSCLAG00000006329) #33 RCL1 (ENSCLAG00000007445) #34 JAK2 (ENSCLAG00000005091) #35 INSL6 (ENSCLAG00000007423) #36 Degu MODERN SPECIES 128 FXN (ENSODEG00000003413) #11 PIP5K1B (ENSODEG00000003585) ENSODEG00000003739 PABIR1 (ENSODEG00000019013) #12 TMEM252 (ENSODEG00000003841) #13 PGM5 (ENSODEG00000003917) #14 ENSODEG00000003983 #16 ENSODEG00000004467 #17 ENSODEG00000004602 #17 ENSODEG00000004711 #17 ENSODEG00000004719 KANK1 (ENSODEG00000004766) #18 DMRT1 (ENSODEG00000004898) #19 DMRT3 (ENSODEG00000004984) #20 DMRT2 (ENSODEG00000004992) #21 SMARCA2 (ENSODEG00000005452) #22 ENSODEG00000006378 ENSODEG00000003492 #24 KCNV2 (ENSODEG00000003536) #25 ENSODEG00000003625 #26 RFX3 (ENSODEG00000003682) #27 GLIS3 (ENSODEG00000003731) #28 SLC1A1 (ENSODEG00000003884) #29 ENSODEG00000003949 SPATA6L (ENSODEG00000004066) #30 PLPP6 (ENSODEG00000019026) #31 CDC37L1 (ENSODEG00000004185) #32 ENSODEG00000004121 #33 RCL1 (ENSODEG00000004151) #34 JAK2 (ENSODEG00000004208) #35 ENSODEG00000004220 Guinea pig MODERN SPECIES 21 PTAR1 (ENSCPOG00000008368) #7 APBA1 (ENSCPOG00000032780) #8 ENTREP1 (ENSCPOG00000003236) #9 TJP2 (ENSCPOG00000021062) #10 FXN (ENSCPOG00000004293) #11 PIP5K1B (ENSCPOG00000004288) PABIR1 (ENSCPOG00000003280) #12 TMEM252 (ENSCPOG00000013771) #13 PGM5 (ENSCPOG00000015031) #14 ENSCPOG00000019718 #16 DOCK8 (ENSCPOG00000008366) #17 KANK1 (ENSCPOG00000008389) #18 DMRT1 (ENSCPOG00000005909) #19 DMRT3 (ENSCPOG00000005912) #20 DMRT2 (ENSCPOG00000008452) #21 SMARCA2 (ENSCPOG00000005475) #22 VLDLR (ENSCPOG00000007685) #24 KCNV2 (ENSCPOG00000032893) #25 ENSCPOG00000008552 #26 RFX3 (ENSCPOG00000000900) #27 GLIS3 (ENSCPOG00000005523) #28 ENSCPOG00000030794 SLC1A1 (ENSCPOG00000011151) #29 PLPP6 (ENSCPOG00000012931) #31 SPATA6L (ENSCPOG00000012925) #30 CDC37L1 (ENSCPOG00000030938) #32 AK3 (ENSCPOG00000011927) #33 RCL1 (ENSCPOG00000015354) #34 JAK2 (ENSCPOG00000014653) #35 INSL6 (ENSCPOG00000002694) #36 ENSCPOG00000001365 #37 Lagomorpha ANCESTRAL SPECIES ENSGT00940000154821.b #22 Pika MODERN SPECIES 4399 SMARCA2 (ENSOPRG00000013474) #22 Rabbit MODERN SPECIES ENSOCUG00000014142 #13 PGM5 (ENSOCUG00000014125) #14 ENSOCUG00000010467 #15 ENSOCUG00000000733 #16 DOCK8 (ENSOCUG00000003208) #17 KANK1 (ENSOCUG00000004753) #18 ENSOCUG00000036685 DMRT3 (ENSOCUG00000004582) #20 ENSOCUG00000027863 DMRT2 (ENSOCUG00000003299) #21 ENSOCUG00000037388 ENSOCUG00000034834 ENSOCUG00000023438 ENSOCUG00000035677 ENSOCUG00000000241 SMARCA2 (ENSOCUG00000006320) #22 ENSOCUG00000022775 VLDLR (ENSOCUG00000002231) #24 KCNV2 (ENSOCUG00000004385) #25 ENSOCUG00000004189 #26 ENSOCUG00000039572 RFX3 (ENSOCUG00000014086) #27 ENSOCUG00000023393 ENSOCUG00000027590 GLIS3 (ENSOCUG00000023004) #28 ENSOCUG00000036407 ENSOCUG00000013264 #29 ENSOCUG00000026987 ENSOCUG00000022202 #29 PLPP6 (ENSOCUG00000003465) #31 SPATA6L (ENSOCUG00000003455) #30 Tree shrew MODERN SPECIES 5134 ENSTBEG00000008665 SMARCA2 (ENSTBEG00000008767) #22 Primates ANCESTRAL SPECIES 9 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Strepsirrhini ANCESTRAL SPECIES 8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896.q #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Lemuriformes ANCESTRAL SPECIES 59 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896.q #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Lemuriformes_a ANCESTRAL SPECIES 86 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523.s #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896.q #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a.a #37 Greater bamboo lemur MODERN SPECIES 152 ENTREP1 (ENSPSMG00000025763) #9 TJP2 (ENSPSMG00000025742) #10 FXN (ENSPSMG00000025681) #11 PIP5K1B (ENSPSMG00000025678) PABIR1 (ENSPSMG00000025658) #12 TMEM252 (ENSPSMG00000025655) #13 PGM5 (ENSPSMG00000025652) #14 ENSPSMG00000025644 #15 ENSPSMG00000025574 #16 DOCK8 (ENSPSMG00000025332) #17 KANK1 (ENSPSMG00000025243) #18 DMRT1 (ENSPSMG00000025222) #19 DMRT3 (ENSPSMG00000025210) #20 DMRT2 (ENSPSMG00000025206) #21 ENSPSMG00000025195 SMARCA2 (ENSPSMG00000025173) #22 ENSPSMG00000025075 VLDLR (ENSPSMG00000025041) #24 KCNV2 (ENSPSMG00000024960) #25 ENSPSMG00000024956 #26 ENSPSMG00000024950 RFX3 (ENSPSMG00000024938) #27 GLIS3 (ENSPSMG00000024897) #28 SLC1A1 (ENSPSMG00000024890) #29 PLPP6 (ENSPSMG00000024881) #31 SPATA6L (ENSPSMG00000024878) #30 CDC37L1 (ENSPSMG00000024864) #32 AK3 (ENSPSMG00000024859) #33 RCL1 (ENSPSMG00000024848) #34 JAK2 (ENSPSMG00000024838) #35 ENSPSMG00000024795 Coquerels sifaka MODERN SPECIES 549 SMARCA2 (ENSPCOG00000025709) #22 ENSPCOG00000026110 ENSPCOG00000019796 VLDLR (ENSPCOG00000026506) #24 KCNV2 (ENSPCOG00000023607) #25 PUM3 (ENSPCOG00000027325) #26 RFX3 (ENSPCOG00000022172) #27 GLIS3 (ENSPCOG00000022619) #28 SLC1A1 (ENSPCOG00000013653) #29 SPATA6L (ENSPCOG00000001879) #30 PLPP6 (ENSPCOG00000013586) #31 CDC37L1 (ENSPCOG00000025983) #32 ENSPCOG00000024436 #33 RCL1 (ENSPCOG00000009611) #34 Mouse lemur MODERN SPECIES 1 APBA1 (ENSMICG00000009602) #8 ENTREP1 (ENSMICG00000002917) #9 TJP2 (ENSMICG00000002908) #10 FXN (ENSMICG00000044611) #11 PIP5K1B (ENSMICG00000004323) TMEM252 (ENSMICG00000044472) #13 PGM5 (ENSMICG00000015998) #14 ENSMICG00000036465 #15 ENSMICG00000005330 ENSMICG00000031232 DOCK8 (ENSMICG00000008267) #17 KANK1 (ENSMICG00000010410) #18 DMRT1 (ENSMICG00000010417) #19 DMRT3 (ENSMICG00000044854) #20 DMRT2 (ENSMICG00000010426) #21 SMARCA2 (ENSMICG00000005162) #22 ENSMICG00000005190 VLDLR (ENSMICG00000005182) #24 KCNV2 (ENSMICG00000005193) #25 PUM3 (ENSMICG00000045916) #26 ENSMICG00000029542 RFX3 (ENSMICG00000011871) #27 ENSMICG00000041775 #28 ENSMICG00000031277 #28 SLC1A1 (ENSMICG00000005171) #29 SPATA6L (ENSMICG00000017688) #30 CDC37L1 (ENSMICG00000017690) #32 ENSMICG00000013112 #33 RCL1 (ENSMICG00000015562) #34 JAK2 (ENSMICG00000003885) #35 INSL6 (ENSMICG00000044551) #36 Bushbaby MODERN SPECIES 121 TJP2 (ENSOGAG00000014757) #10 ENSOGAG00000031105 #11 PIP5K1B (ENSOGAG00000009431) PABIR1 (ENSOGAG00000024522) #12 TMEM252 (ENSOGAG00000015132) #13 PGM5 (ENSOGAG00000015121) #14 ENSOGAG00000029277 #15 ENSOGAG00000002011 #16 DOCK8 (ENSOGAG00000004639) #17 ENSOGAG00000031226 KANK1 (ENSOGAG00000001985) #18 DMRT1 (ENSOGAG00000001989) #19 DMRT3 (ENSOGAG00000026565) #20 DMRT2 (ENSOGAG00000001994) #21 ENSOGAG00000025218 SMARCA2 (ENSOGAG00000017053) #22 VLDLR (ENSOGAG00000013312) #24 KCNV2 (ENSOGAG00000030433) #25 ENSOGAG00000008125 #26 RFX3 (ENSOGAG00000007762) #27 GLIS3 (ENSOGAG00000007376) #28 SLC1A1 (ENSOGAG00000007464) #29 PLPP6 (ENSOGAG00000007472) #31 SPATA6L (ENSOGAG00000007468) #30 CDC37L1 (ENSOGAG00000007475) #32 AK3 (ENSOGAG00000007477) #33 RCL1 (ENSOGAG00000007480) #34 JAK2 (ENSOGAG00000012246) #35 ENSOGAG00000009500 #37 PLGRKT (ENSOGAG00000003280) CD274 (ENSOGAG00000003282) Haplorrhini ANCESTRAL SPECIES 9 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a.a #37 Tarsier DUPLICATION Tarsier MODERN SPECIES 5009 CUNH11orf74 (ENSTSYG00000011833) TRAF6 (ENSTSYG00000028225) PRR5L (ENSTSYG00000031790) ENSTSYG00000006704 SMARCA2 (ENSTSYG00000003858) #22 Tarsier MODERN SPECIES 6262 ENSTSYG00000036848 #22 Simiiformes ANCESTRAL SPECIES 11 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Platyrrhini ANCESTRAL SPECIES 8 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00390000005811.w.a #11 ENSGT00940000158634 #10 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523.r #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Cebidae ANCESTRAL SPECIES 7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00390000005811.w.a #11 ENSGT00940000158634 #10 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523.r #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Cebidae_a ANCESTRAL SPECIES 92 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00390000005811.w.a #11 ENSGT00940000158634 #10 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523.r #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.ab ENSGT00530000063402.a.h ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Capuchin MODERN SPECIES 227 SMARCA2 (ENSCCAG00000030636) #22 ENSCCAG00000032291 ENSCCAG00000024458 VLDLR (ENSCCAG00000034631) #24 KCNV2 (ENSCCAG00000006608) #25 PUM3 (ENSCCAG00000032650) #26 ENSCCAG00000023250 ENSCCAG00000034048 ENSCCAG00000032475 RFX3 (ENSCCAG00000030352) #27 GLIS3 (ENSCCAG00000025272) #28 SLC1A1 (ENSCCAG00000024828) #29 SPATA6L (ENSCCAG00000019855) #30 PLPP6 (ENSCCAG00000017149) #31 CDC37L1 (ENSCCAG00000036002) #32 AK3 (ENSCCAG00000024553) #33 Bolivian squirrel monkey MODERN SPECIES 118 ENTREP1 (ENSSBOG00000021064) #9 FXN (ENSSBOG00000022179) #11 TJP2 (ENSSBOG00000035815) #10 PIP5K1B (ENSSBOG00000027534) TMEM252 (ENSSBOG00000022996) #13 PGM5 (ENSSBOG00000030297) #14 ENSSBOG00000020533 #15 ENSSBOG00000031336 #16 ENSSBOG00000032210 DOCK8 (ENSSBOG00000020599) #17 KANK1 (ENSSBOG00000032525) #18 DMRT1 (ENSSBOG00000027694) #19 DMRT3 (ENSSBOG00000027585) #20 DMRT2 (ENSSBOG00000010665) #21 ENSSBOG00000019886 SMARCA2 (ENSSBOG00000034827) #22 ENSSBOG00000020747 VLDLR (ENSSBOG00000031091) #24 KCNV2 (ENSSBOG00000023504) #25 PUM3 (ENSSBOG00000028066) #26 ENSSBOG00000022458 ENSSBOG00000026932 ENSSBOG00000016907 RFX3 (ENSSBOG00000031103) #27 GLIS3 (ENSSBOG00000032997) #28 ENSSBOG00000019687 SLC1A1 (ENSSBOG00000032684) #29 SPATA6L (ENSSBOG00000026985) #30 ENSSBOG00000022998 PLPP6 (ENSSBOG00000019035) #31 CDC37L1 (ENSSBOG00000032737) #32 Marmoset MODERN SPECIES ENSCJAG00000054232 ENSCJAG00000032275 #16 ENSCJAG00000003147 ENSCJAG00000074827 ENSCJAG00000085396 ENSCJAG00000073324 ENSCJAG00000040149 #15 ENSCJAG00000010423 #16 ENSCJAG00000054365 ENSCJAG00000078334 DOCK8 (ENSCJAG00000010485) #17 KANK1 (ENSCJAG00000010595) #18 ENSCJAG00000084547 DMRT3 (ENSCJAG00000063670) #20 DMRT2 (ENSCJAG00000010690) #21 SMARCA2 (ENSCJAG00000010710) #22 ENSCJAG00000042690 VLDLR (ENSCJAG00000010772) #24 KCNV2 (ENSCJAG00000042809) #25 PUM3 (ENSCJAG00000010917) #26 RFX3 (ENSCJAG00000010996) #27 GLIS3 (ENSCJAG00000011083) #28 ENSCJAG00000073768 SLC1A1 (ENSCJAG00000011113) #29 SPATA6L (ENSCJAG00000011136) #30 PLPP6 (ENSCJAG00000063898) #31 AK3 (ENSCJAG00000011188) #33 CDC37L1 (ENSCJAG00000011155) #32 ENSCJAG00000059464 RCL1 (ENSCJAG00000011202) #34 JAK2 (ENSCJAG00000011228) #35 Mas night monkey MODERN SPECIES 599 DMRT1 (ENSANAG00000030765) #19 DMRT3 (ENSANAG00000027840) #20 DMRT2 (ENSANAG00000020591) #21 ENSANAG00000018592 SMARCA2 (ENSANAG00000026498) #22 ENSANAG00000029407 VLDLR (ENSANAG00000020851) #24 KCNV2 (ENSANAG00000035114) #25 PUM3 (ENSANAG00000024520) #26 ENSANAG00000036903 RFX3 (ENSANAG00000038145) #27 GLIS3 (ENSANAG00000038022) #28 SLC1A1 (ENSANAG00000032125) #29 PLPP6 (ENSANAG00000019076) #31 SPATA6L (ENSANAG00000030395) #30 ENSANAG00000029767 CDC37L1 (ENSANAG00000028426) #32 AK3 (ENSANAG00000037726) #33 RCL1 (ENSANAG00000037372) #34 JAK2 (ENSANAG00000027034) #35 Catarrhini ANCESTRAL SPECIES 13 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Hominoidea ANCESTRAL SPECIES 23 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Hominidae ANCESTRAL SPECIES 10 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353.a #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Homo/Pan/Gorilla group ANCESTRAL SPECIES 10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353.a.a.a #15 ENSGT00940000163353.a.a.b #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Homo/Pan group ANCESTRAL SPECIES 27 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Pan ANCESTRAL SPECIES 26 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 Chimpanzee MODERN SPECIES 22 ENSPTRG00000031407 ENSPTRG00000020994 ENSPTRG00000052275 DOCK8 (ENSPTRG00000020725) #17 ENSPTRG00000044534 KANK1 (ENSPTRG00000041819) #18 DMRT1 (ENSPTRG00000020728) #19 DMRT3 (ENSPTRG00000020729) #20 DMRT2 (ENSPTRG00000020730) #21 SMARCA2 (ENSPTRG00000051168) #22 ENSPTRG00000052144 ENSPTRG00000047815 VLDLR (ENSPTRG00000020732) #24 KCNV2 (ENSPTRG00000020734) #25 PUM3 (ENSPTRG00000020735) #26 ENSPTRG00000046907 RFX3 (ENSPTRG00000048670) #27 ENSPTRG00000050873 GLIS3 (ENSPTRG00000020738) #28 SLC1A1 (ENSPTRG00000020739) #29 SPATA6L (ENSPTRG00000020740) #30 PLPP6 (ENSPTRG00000044921) #31 CDC37L1 (ENSPTRG00000020741) #32 AK3 (ENSPTRG00000020742) #33 RCL1 (ENSPTRG00000020743) #34 Bonobo MODERN SPECIES 22 ENSPPAG00000035014 DOCK8 (ENSPPAG00000041152) #17 DMRT1 (ENSPPAG00000036830) #19 ENSPPAG00000027768 #20 DMRT2 (ENSPPAG00000033739) #21 SMARCA2 (ENSPPAG00000038717) #22 ENSPPAG00000042332 ENSPPAG00000042393 VLDLR (ENSPPAG00000029389) #24 KCNV2 (ENSPPAG00000040791) #25 PUM3 (ENSPPAG00000041337) #26 ENSPPAG00000029157 RFX3 (ENSPPAG00000039978) #27 ENSPPAG00000011368 GLIS3 (ENSPPAG00000043097) #28 SLC1A1 (ENSPPAG00000027502) #29 SPATA6L (ENSPPAG00000010175) #30 CDC37L1 (ENSPPAG00000038614) #32 AK3 (ENSPPAG00000033568) #33 RCL1 (ENSPPAG00000037958) #34 JAK2 (ENSPPAG00000019000) #35 Human MODERN SPECIES 21 WASHC1 (ENSG00000181404) FOXD4 (ENSG00000170122) #15 ZNG1A (ENSG00000172785) DOCK8 (ENSG00000107099) #17 KANK1 (ENSG00000107104) #18 DMRT1 (ENSG00000137090) #19 DMRT3 (ENSG00000064218) #20 DMRT2 (ENSG00000173253) #21 SMARCA2 (ENSG00000080503) #22 VLDLR (ENSG00000147852) #24 KCNV2 (ENSG00000168263) #25 PUM3 (ENSG00000080608) #26 RFX3 (ENSG00000080298) #27 GLIS3 (ENSG00000107249) #28 SLC1A1 (ENSG00000106688) #29 SPATA6L (ENSG00000106686) #30 PLPP6 (ENSG00000205808) #31 CDC37L1 (ENSG00000106993) #32 AK3 (ENSG00000147853) #33 RCL1 (ENSG00000120158) #34 JAK2 (ENSG00000096968) #35 INSL6 (ENSG00000120210) #36 INSL4 (ENSG00000120211) ##37 RLN2 (ENSG00000107014) #37 Gorilla MODERN SPECIES 22 TJP2 (ENSGGOG00000010313) #10 FXN (ENSGGOG00000007636) #11 PIP5K1B (ENSGGOG00000013948) PABIR1 (ENSGGOG00000034987) #12 TMEM252 (ENSGGOG00000015514) #13 ENSGGOG00000037092 #14 FOXD4 (ENSGGOG00000003673) #15 ENSGGOG00000022867 #16 ENSGGOG00000015757 DOCK8 (ENSGGOG00000008791) #17 KANK1 (ENSGGOG00000005466) #18 DMRT1 (ENSGGOG00000013298) #19 DMRT3 (ENSGGOG00000013303) #20 DMRT2 (ENSGGOG00000025101) #21 ENSGGOG00000039224 SMARCA2 (ENSGGOG00000000513) #22 ENSGGOG00000038609 VLDLR (ENSGGOG00000001362) #24 KCNV2 (ENSGGOG00000000231) #25 PUM3 (ENSGGOG00000006143) #26 ENSGGOG00000022372 RFX3 (ENSGGOG00000003805) #27 GLIS3 (ENSGGOG00000038970) #28 SLC1A1 (ENSGGOG00000000262) #29 PLPP6 (ENSGGOG00000040149) #31 SPATA6L (ENSGGOG00000034964) #30 CDC37L1 (ENSGGOG00000006889) #32 AK3 (ENSGGOG00000028122) #33 RCL1 (ENSGGOG00000015041) #34 ENSGGOG00000022573 JAK2 (ENSGGOG00000007243) #35 Orangutan MODERN SPECIES 22 ENTREP1 (ENSPPYG00000019277) #9 TJP2 (ENSPPYG00000019275) #10 PRKACG (ENSPPYG00000019273) ENSPPYG00000019272 PABIR1 (ENSPPYG00000019271) #12 TMEM252 (ENSPPYG00000019269) #13 PGM5 (ENSPPYG00000019268) #14 ENSPPYG00000041038 #15 ZNG1A (ENSPPYG00000019265) #16 ENSPPYG00000030930 DOCK8 (ENSPPYG00000019264) #17 KANK1 (ENSPPYG00000019262) #18 DMRT1 (ENSPPYG00000019261) #19 DMRT3 (ENSPPYG00000019260) #20 DMRT2 (ENSPPYG00000035747) #21 SMARCA2 (ENSPPYG00000019258) #22 ENSPPYG00000041078 VLDLR (ENSPPYG00000019257) #24 KCNV2 (ENSPPYG00000019256) #25 PUM3 (ENSPPYG00000019255) #26 ENSPPYG00000019254 RFX3 (ENSPPYG00000019253) #27 GLIS3 (ENSPPYG00000019250) #28 SLC1A1 (ENSPPYG00000019249) #29 PLPP6 (ENSPPYG00000019248) #31 SPATA6L (ENSPPYG00000019247) #30 CDC37L1 (ENSPPYG00000019246) #32 AK3 (ENSPPYG00000019245) #33 RCL1 (ENSPPYG00000019244) #34 JAK2 (ENSPPYG00000019243) #35 INSL6 (ENSPPYG00000019242) #36 Gibbon MODERN SPECIES 10 PIP5K1B (ENSNLEG00000008227) PABIR1 (ENSNLEG00000034102) #12 ENSNLEG00000030468 TMEM252 (ENSNLEG00000028670) #13 ENSNLEG00000008260 #14 ENSNLEG00000018739 ENSNLEG00000008264 #15 ENSNLEG00000008270 #16 ENSNLEG00000028331 DOCK8 (ENSNLEG00000008451) #17 KANK1 (ENSNLEG00000008510) #18 ENSNLEG00000018709 DMRT1 (ENSNLEG00000008544) #19 DMRT3 (ENSNLEG00000008556) #20 DMRT2 (ENSNLEG00000008564) #21 SMARCA2 (ENSNLEG00000008575) #22 ENSNLEG00000029055 ENSNLEG00000008695 VLDLR (ENSNLEG00000008596) #24 KCNV2 (ENSNLEG00000008701) #25 PUM3 (ENSNLEG00000008712) #26 ENSNLEG00000029981 RFX3 (ENSNLEG00000008785) #27 ENSNLEG00000028743 ENSNLEG00000034817 #28 ENSNLEG00000035119 #28 SLC1A1 (ENSNLEG00000031411) #29 SPATA6L (ENSNLEG00000008860) #30 ENSNLEG00000028049 #31 CDC37L1 (ENSNLEG00000008879) #32 AK3 (ENSNLEG00000008885) #33 Cercopithecidae ANCESTRAL SPECIES 9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00940000154318.B.i.b ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 Rhinopithecus ANCESTRAL SPECIES 227 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00390000010770.q.a ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 Black snub-nosed monkey MODERN SPECIES 90 TMEM252 (ENSRBIG00000012350) #13 PGM5 (ENSRBIG00000031935) #14 ENSRBIG00000042766 #16 ENSRBIG00000034943 ENSRBIG00000041692 DOCK8 (ENSRBIG00000031277) #17 KANK1 (ENSRBIG00000030454) #18 DMRT1 (ENSRBIG00000040985) #19 DMRT3 (ENSRBIG00000030818) #20 DMRT2 (ENSRBIG00000038326) #21 SMARCA2 (ENSRBIG00000038618) #22 ENSRBIG00000039498 SLC24A3 (ENSRBIG00000026610) RIN2 (ENSRBIG00000030048) NAA20 (ENSRBIG00000037845) CRNKL1 (ENSRBIG00000031770) CFAP61 (ENSRBIG00000013830) RALGAPA2 (ENSRBIG00000011325) ENSRBIG00000044906 KIZ (ENSRBIG00000004023) XRN2 (ENSRBIG00000036193) Golden snub-nosed monkey MODERN SPECIES 1156 ITGB1 (ENSRROG00000044827) NRP1 (ENSRROG00000036541) PGM5 (ENSRROG00000035630) #14 ENSRROG00000004214 #16 ENSRROG00000041612 ENSRROG00000031285 DOCK8 (ENSRROG00000030555) #17 KANK1 (ENSRROG00000028581) #18 DMRT1 (ENSRROG00000035111) #19 DMRT3 (ENSRROG00000033393) #20 DMRT2 (ENSRROG00000028272) #21 ENSRROG00000034283 SMARCA2 (ENSRROG00000019271) #22 Cercopithecinae ANCESTRAL SPECIES 12 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00940000154318.B.i.b ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 Vervet Monkey MODERN SPECIES 3 TJP2 (ENSCSAG00000008451) #10 FXN (ENSCSAG00000008470) #11 PRKACG (ENSCSAG00000018499) PIP5K1B (ENSCSAG00000008511) PABIR1 (ENSCSAG00000018497) #12 TMEM252 (ENSCSAG00000008529) #13 PGM5 (ENSCSAG00000008540) #14 FOXD4L1 (ENSCSAG00000018495) #15 ENSCSAG00000008555 #16 ENSCSAG00000018493 DOCK8 (ENSCSAG00000008591) #17 KANK1 (ENSCSAG00000008611) #18 DMRT1 (ENSCSAG00000008623) #19 DMRT3 (ENSCSAG00000008627) #20 DMRT2 (ENSCSAG00000008632) #21 SMARCA2 (ENSCSAG00000008650) #22 ENSCSAG00000008657 VLDLR (ENSCSAG00000008671) #24 KCNV2 (ENSCSAG00000008677) #25 PUM3 (ENSCSAG00000008691) #26 RFX3 (ENSCSAG00000008704) #27 ENSCSAG00000008711 #28 SLC1A1 (ENSCSAG00000008723) #29 PLPP6 (ENSCSAG00000018491) #31 SPATA6L (ENSCSAG00000008768) #30 CDC37L1 (ENSCSAG00000008790) #32 AK3 (ENSCSAG00000008801) #33 RCL1 (ENSCSAG00000008811) #34 JAK2 (ENSCSAG00000008828) #35 INSL6 (ENSCSAG00000008855) #36 INSL4 (ENSCSAG00000008859) ##37 Cercopithecinae_a ANCESTRAL SPECIES 12 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00940000154318.B.i.b ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00940000159989.h ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 Cercopithecinae_b ANCESTRAL SPECIES 7 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000154318.B.i.b ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00940000159989.h ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 Cercopithecinae_d ANCESTRAL SPECIES 34 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000154318.B.i.b ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00940000159989.h ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 Drill MODERN SPECIES 978 SMARCA2 (ENSMLEG00000027418) #22 ENSMLEG00000041221 ENSMLEG00000035182 VLDLR (ENSMLEG00000032288) #24 KCNV2 (ENSMLEG00000032357) #25 PUM3 (ENSMLEG00000034820) #26 ENSMLEG00000041919 RFX3 (ENSMLEG00000033860) #27 ENSMLEG00000038681 ENSMLEG00000000662 GLIS3 (ENSMLEG00000040353) #28 SLC1A1 (ENSMLEG00000042172) #29 SPATA6L (ENSMLEG00000034746) #30 PLPP6 (ENSMLEG00000009133) #31 CDC37L1 (ENSMLEG00000014590) #32 AK3 (ENSMLEG00000032869) #33 Sooty mangabey MODERN SPECIES 629 APBA1 (ENSCATG00000037394) #8 ENTREP1 (ENSCATG00000029249) #9 TJP2 (ENSCATG00000004548) #10 FXN (ENSCATG00000031607) #11 PIP5K1B (ENSCATG00000030684) TMEM252 (ENSCATG00000030856) #13 PGM5 (ENSCATG00000040727) #14 FOXD4L1 (ENSCATG00000041044) #15 ENSCATG00000043151 #16 ENSCATG00000035578 DOCK8 (ENSCATG00000037251) #17 KANK1 (ENSCATG00000042088) #18 DMRT1 (ENSCATG00000043860) #19 DMRT3 (ENSCATG00000043509) #20 DMRT2 (ENSCATG00000032878) #21 SMARCA2 (ENSCATG00000031470) #22 ENSCATG00000034215 ENSCATG00000014393 VLDLR (ENSCATG00000033177) #24 KCNV2 (ENSCATG00000037552) #25 PUM3 (ENSCATG00000024880) #26 ENSCATG00000034924 ENSCATG00000029808 RFX3 (ENSCATG00000034639) #27 ENSCATG00000030409 GLIS3 (ENSCATG00000038488) #28 SLC1A1 (ENSCATG00000039114) #29 PLPP6 (ENSCATG00000022355) #31 SPATA6L (ENSCATG00000043815) #30 CDC37L1 (ENSCATG00000041223) #32 AK3 (ENSCATG00000044404) #33 Olive baboon MODERN SPECIES 4 ENSPANG00000050497 TJP2 (ENSPANG00000025110) #10 FXN (ENSPANG00000025109) #11 PRKACG (ENSPANG00000041885) PIP5K1B (ENSPANG00000025113) ENSPANG00000042661 TMEM252 (ENSPANG00000025115) #13 PGM5 (ENSPANG00000025114) #14 FOXD4L1 (ENSPANG00000009332) #15 ENSPANG00000025116 #16 DOCK8 (ENSPANG00000025117) #17 KANK1 (ENSPANG00000025125) #18 DMRT1 (ENSPANG00000025124) #19 DMRT3 (ENSPANG00000025123) #20 DMRT2 (ENSPANG00000025122) #21 SMARCA2 (ENSPANG00000025121) #22 ENSPANG00000042712 VLDLR (ENSPANG00000025120) #24 KCNV2 (ENSPANG00000025119) #25 PUM3 (ENSPANG00000025118) #26 RFX3 (ENSPANG00000025143) #27 ENSPANG00000046940 GLIS3 (ENSPANG00000025157) #28 SLC1A1 (ENSPANG00000025156) #29 SPATA6L (ENSPANG00000025154) #30 CDC37L1 (ENSPANG00000025153) #32 AK3 (ENSPANG00000025152) #33 RCL1 (ENSPANG00000025151) #34 JAK2 (ENSPANG00000025145) #35 ENSPANG00000041678 INSL6 (ENSPANG00000025144) #36 Macaca ANCESTRAL SPECIES 10 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.w.a #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00940000154318.B.i.b ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00390000004049.cb ENSGT01050000244879.a.a.b #27 ENSGT00940000159989.h ENSGT00910000146957 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 Pig-tailed macaque MODERN SPECIES 182 ENTREP1 (ENSMNEG00000040043) #9 TJP2 (ENSMNEG00000036109) #10 FXN (ENSMNEG00000034453) #11 PIP5K1B (ENSMNEG00000011196) TMEM252 (ENSMNEG00000034076) #13 PGM5 (ENSMNEG00000042872) #14 FOXD4L1 (ENSMNEG00000037878) #15 ENSMNEG00000034389 #16 ENSMNEG00000005621 ENSMNEG00000040201 DOCK8 (ENSMNEG00000042769) #17 KANK1 (ENSMNEG00000029060) #18 DMRT1 (ENSMNEG00000036006) #19 DMRT3 (ENSMNEG00000035240) #20 DMRT2 (ENSMNEG00000033851) #21 SMARCA2 (ENSMNEG00000041069) #22 ENSMNEG00000028744 ENSMNEG00000040152 ENSMNEG00000044919 VLDLR (ENSMNEG00000040863) #24 KCNV2 (ENSMNEG00000012723) #25 PUM3 (ENSMNEG00000035288) #26 ENSMNEG00000032248 RFX3 (ENSMNEG00000038188) #27 ENSMNEG00000042708 ENSMNEG00000040313 GLIS3 (ENSMNEG00000032738) #28 SLC1A1 (ENSMNEG00000029913) #29 SPATA6L (ENSMNEG00000044422) #30 PLPP6 (ENSMNEG00000001828) #31 CDC37L1 (ENSMNEG00000030663) #32 Macaca_a ANCESTRAL SPECIES 10 ENSGT00390000005811.w.a #11 ENSGT00940000163244.d.b.a.b.b.b.b.b.b.b.b.a.b.a.b.a.b.b.a.a.a.a.a ENSGT00940000165129 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00390000010770.r ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT01100000264112.b.a ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00910000146995 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a.b ##37 Rhesus MODERN SPECIES 6 PRKACG (ENSMMUG00000020379) PIP5K1B (ENSMMUG00000012472) TMEM252 (ENSMMUG00000056154) #13 PGM5 (ENSMMUG00000008230) #14 FOXD4L1 (ENSMMUG00000023182) #15 ZNG1A (ENSMMUG00000016193) #16 ENSMMUG00000050562 ENSMMUG00000058086 DOCK8 (ENSMMUG00000016976) #17 ENSMMUG00000064601 KANK1 (ENSMMUG00000019862) #18 ENSMMUG00000061012 DMRT3 (ENSMMUG00000044083) #20 DMRT2 (ENSMMUG00000014844) #21 ENSMMUG00000051059 SMARCA2 (ENSMMUG00000015279) #22 VLDLR (ENSMMUG00000015093) #24 KCNV2 (ENSMMUG00000060949) #25 PUM3 (ENSMMUG00000002362) #26 RFX3 (ENSMMUG00000000802) #27 GLIS3 (ENSMMUG00000057568) #28 SLC1A1 (ENSMMUG00000000135) #29 PLPP6 (ENSMMUG00000059411) #31 SPATA6L (ENSMMUG00000000136) #30 CDC37L1 (ENSMMUG00000000141) #32 AK3 (ENSMMUG00000000143) #33 RCL1 (ENSMMUG00000057331) #34 JAK2 (ENSMMUG00000014558) #35 INSL6 (ENSMMUG00000065127) #36 INSL4 (ENSMMUG00000058221) ##37 RLN2 (ENSMMUG00000047971) #37 Crab-eating macaque DUPLICATION Crab-eating macaque MODERN SPECIES 6 ENSMFAG00000053935 ENSMFAG00000063759 PRKACG (ENSMFAG00000030376) PIP5K1B (ENSMFAG00000038711) TMEM252 (ENSMFAG00000062896) #13 PGM5 (ENSMFAG00000045131) #14 ENSMFAG00000044635 #16 ENSMFAG00000051139 ENSMFAG00000045857 DOCK8 (ENSMFAG00000008069) #17 ENSMFAG00000047680 KANK1 (ENSMFAG00000036947) #18 ENSMFAG00000060255 DMRT3 (ENSMFAG00000045391) #20 DMRT2 (ENSMFAG00000040812) #21 ENSMFAG00000058821 #22 ENSMFAG00000056188 ENSMFAG00000003814 #22 ENSMFAG00000048099 VLDLR (ENSMFAG00000032374) #24 KCNV2 (ENSMFAG00000055892) #25 PUM3 (ENSMFAG00000001430) #26 ENSMFAG00000049201 RFX3 (ENSMFAG00000000237) #27 ENSMFAG00000049557 ENSMFAG00000030908 #28 SLC1A1 (ENSMFAG00000038163) #29 SPATA6L (ENSMFAG00000032285) #30 CDC37L1 (ENSMFAG00000000879) #32 AK3 (ENSMFAG00000041698) #33 ENSMFAG00000049440 Crab-eating macaque MODERN SPECIES 6 PRKACG (ENSMFAG00000030376) PIP5K1B (ENSMFAG00000038711) TMEM252 (ENSMFAG00000062896) #13 PGM5 (ENSMFAG00000045131) #14 ENSMFAG00000044635 #16 ENSMFAG00000051139 ENSMFAG00000045857 DOCK8 (ENSMFAG00000008069) #17 ENSMFAG00000047680 KANK1 (ENSMFAG00000036947) #18 ENSMFAG00000060255 DMRT3 (ENSMFAG00000045391) #20 DMRT2 (ENSMFAG00000040812) #21 ENSMFAG00000058821 #22 ENSMFAG00000056188 ENSMFAG00000003814 #22 ENSMFAG00000048099 VLDLR (ENSMFAG00000032374) #24 KCNV2 (ENSMFAG00000055892) #25 PUM3 (ENSMFAG00000001430) #26 ENSMFAG00000049201 RFX3 (ENSMFAG00000000237) #27 ENSMFAG00000049557 ENSMFAG00000030908 #28 SLC1A1 (ENSMFAG00000038163) #29 SPATA6L (ENSMFAG00000032285) #30 CDC37L1 (ENSMFAG00000000879) #32 AK3 (ENSMFAG00000041698) #33 ENSMFAG00000049440 RCL1 (ENSMFAG00000037906) #34 JAK2 (ENSMFAG00000003627) #35 Laurasiatheria ANCESTRAL SPECIES 9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Eulipotyphla ANCESTRAL SPECIES ENSGT00940000154821.b #22 Hedgehog MODERN SPECIES 8952 ENSEEUG00000015540 #22 Common shrew MODERN SPECIES 6943 SMARCA2 (ENSSARG00000007888) #22 Laurasiatheria_a ANCESTRAL SPECIES 11 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Artiodactyla ANCESTRAL SPECIES 7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Suina ANCESTRAL SPECIES 23 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00520000061590 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Chacoan peccary MODERN SPECIES 20 TJP2 (ENSCWAG00000018633) #10 ENSCWAG00000019132 FXN (ENSCWAG00000019158) #11 PIP5K1B (ENSCWAG00000019197) PABIR1 (ENSCWAG00000019304) #12 TMEM252 (ENSCWAG00000019312) #13 PGM5 (ENSCWAG00000019336) #14 ENSCWAG00000019440 #15 ENSCWAG00000019496 #16 DOCK8 (ENSCWAG00000019884) #17 KANK1 (ENSCWAG00000020332) #18 DMRT1 (ENSCWAG00000020382) #19 DMRT3 (ENSCWAG00000020400) #20 DMRT2 (ENSCWAG00000020422) #21 ENSCWAG00000020471 SMARCA2 (ENSCWAG00000020512) #22 VLDLR (ENSCWAG00000020653) #24 ENSCWAG00000020684 KCNV2 (ENSCWAG00000020693) #25 PUM3 (ENSCWAG00000020700) #26 RFX3 (ENSCWAG00000020726) #27 ENSCWAG00000020759 GLIS3 (ENSCWAG00000020767) #28 SLC1A1 (ENSCWAG00000020776) #29 SPATA6L (ENSCWAG00000020801) #30 PLPP6 (ENSCWAG00000020823) #31 CDC37L1 (ENSCWAG00000020832) #32 AK3 (ENSCWAG00000020856) #33 RCL1 (ENSCWAG00000020883) #34 ENSCWAG00000020913 ENSCWAG00000020920 Pig DUPLICATION Pig MODERN SPECIES PIP5K1B (ENSSSCG00000027161) PABIR1 (ENSSSCG00000057474) #12 TMEM252 (ENSSSCG00000037125) #13 PGM5 (ENSSSCG00000005243) #14 ENSSSCG00000041279 #15 ENSSSCG00000005241 #16 DOCK8 (ENSSSCG00000005240) #17 KANK1 (ENSSSCG00000005235) #18 DMRT1 (ENSSSCG00000005236) #19 DMRT3 (ENSSSCG00000040481) #20 DMRT2 (ENSSSCG00000005233) #21 ENSSSCG00000046403 ENSSSCG00000044946 ENSSSCG00000032324 ENSSSCG00000057314 #22 ENSSSCG00000005232 #22 ENSSSCG00000041522 ENSSSCG00000052990 ENSSSCG00000040670 VLDLR (ENSSSCG00000005229) #24 KCNV2 (ENSSSCG00000005228) #25 PUM3 (ENSSSCG00000005227) #26 ENSSSCG00000039823 RFX3 (ENSSSCG00000005225) #27 GLIS3 (ENSSSCG00000005224) #28 SLC1A1 (ENSSSCG00000005222) #29 PLPP6 (ENSSSCG00000005220) #31 SPATA6L (ENSSSCG00000005221) #30 CDC37L1 (ENSSSCG00000005219) #32 AK3 (ENSSSCG00000023595) #33 ENSSSCG00000058562 #34 Pig MODERN SPECIES ENSSSCG00000032999 #11 PIP5K1B (ENSSSCG00000027161) PABIR1 (ENSSSCG00000057474) #12 TMEM252 (ENSSSCG00000037125) #13 PGM5 (ENSSSCG00000005243) #14 ENSSSCG00000041279 #15 ENSSSCG00000005241 #16 DOCK8 (ENSSSCG00000005240) #17 KANK1 (ENSSSCG00000005235) #18 DMRT1 (ENSSSCG00000005236) #19 DMRT3 (ENSSSCG00000040481) #20 DMRT2 (ENSSSCG00000005233) #21 ENSSSCG00000046403 ENSSSCG00000044946 ENSSSCG00000032324 ENSSSCG00000057314 #22 ENSSSCG00000005232 #22 ENSSSCG00000041522 ENSSSCG00000052990 ENSSSCG00000040670 VLDLR (ENSSSCG00000005229) #24 KCNV2 (ENSSSCG00000005228) #25 PUM3 (ENSSSCG00000005227) #26 ENSSSCG00000039823 RFX3 (ENSSSCG00000005225) #27 GLIS3 (ENSSSCG00000005224) #28 SLC1A1 (ENSSSCG00000005222) #29 PLPP6 (ENSSSCG00000005220) #31 SPATA6L (ENSSSCG00000005221) #30 CDC37L1 (ENSSSCG00000005219) #32 AK3 (ENSSSCG00000023595) #33 Artiodactyla_a ANCESTRAL SPECIES 6 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Artiodactyla_b ANCESTRAL SPECIES 7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Pecora ANCESTRAL SPECIES 30 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Yarkand deer MODERN SPECIES 21 FXN (ENSCHYG00000017028) #11 ENSCHYG00000016971 PIP5K1B (ENSCHYG00000016753) PABIR1 (ENSCHYG00000016706) #12 TMEM252 (ENSCHYG00000016651) #13 ENSCHYG00000016626 PGM5 (ENSCHYG00000016305) #14 ENSCHYG00000016258 #15 ENSCHYG00000015376 #16 DOCK8 (ENSCHYG00000014734) #17 KANK1 (ENSCHYG00000014368) #18 ENSCHYG00000014288 DMRT1 (ENSCHYG00000014189) #19 DMRT3 (ENSCHYG00000026880) #20 DMRT2 (ENSCHYG00000026873) #21 SMARCA2 (ENSCHYG00000026820) #22 ENSCHYG00000026782 VLDLR (ENSCHYG00000026763) #24 KCNV2 (ENSCHYG00000026745) #25 PUM3 (ENSCHYG00000026723) #26 RFX3 (ENSCHYG00000026695) #27 GLIS3 (ENSCHYG00000026667) #28 SLC1A1 (ENSCHYG00000026638) #29 PLPP6 (ENSCHYG00000026621) #31 SPATA6L (ENSCHYG00000026599) #30 CDC37L1 (ENSCHYG00000026576) #32 AK3 (ENSCHYG00000026564) #33 RCL1 (ENSCHYG00000026548) #34 JAK2 (ENSCHYG00000026521) #35 INSL6 (ENSCHYG00000026514) #36 PLGRKT (ENSCHYG00000026504) Percora_a ANCESTRAL SPECIES 24 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Siberian musk deer MODERN SPECIES 112 PIP5K1B (ENSMMSG00000003205) PABIR1 (ENSMMSG00000003185) #12 ENSMMSG00000003177 TMEM252 (ENSMMSG00000003173) #13 PGM5 (ENSMMSG00000003148) #14 ENSMMSG00000003127 #15 ENSMMSG00000002933 #16 ENSMMSG00000002885 DOCK8 (ENSMMSG00000002837) #17 KANK1 (ENSMMSG00000002767) #18 ENSMMSG00000002748 DMRT1 (ENSMMSG00000002731) #19 DMRT3 (ENSMMSG00000002720) #20 DMRT2 (ENSMMSG00000002675) #21 ENSMMSG00000002655 SMARCA2 (ENSMMSG00000002325) #22 ENSMMSG00000002272 Bovidae ANCESTRAL SPECIES 14 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Caprinae ANCESTRAL SPECIES 14 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00660000097148 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Goat MODERN SPECIES 27 PTAR1 (ENSCHIG00000007358) #7 APBA1 (ENSCHIG00000016850) #8 ENSCHIG00000022109 #9 TJP2 (ENSCHIG00000009916) #10 FXN (ENSCHIG00000019169) #11 PIP5K1B (ENSCHIG00000015013) TMEM252 (ENSCHIG00000021046) #13 PGM5 (ENSCHIG00000006743) #14 ENSCHIG00000006716 #15 ENSCHIG00000024887 #16 DOCK8 (ENSCHIG00000014695) #17 KANK1 (ENSCHIG00000018134) #18 DMRT1 (ENSCHIG00000024212) #19 DMRT3 (ENSCHIG00000013041) #20 DMRT2 (ENSCHIG00000020138) #21 SMARCA2 (ENSCHIG00000025863) #22 ENSCHIG00000012185 VLDLR (ENSCHIG00000021572) #24 KCNV2 (ENSCHIG00000011625) #25 PUM3 (ENSCHIG00000021559) #26 RFX3 (ENSCHIG00000011556) #27 ENSCHIG00000019534 #28 ENSCHIG00000007959 SLC1A1 (ENSCHIG00000018337) #29 PLPP6 (ENSCHIG00000001745) #31 SPATA6L (ENSCHIG00000020946) #30 ENSCHIG00000010369 CDC37L1 (ENSCHIG00000025238) #32 AK3 (ENSCHIG00000024602) #33 RCL1 (ENSCHIG00000012407) #34 INSL6 (ENSCHIG00000020505) #36 Rambouillet Sheep MODERN SPECIES 11 APBA1 (ENSOARG00020019533) #8 ENTREP1 (ENSOARG00020019624) #9 ENSOARG00020019784 TJP2 (ENSOARG00020019889) #10 PIP5K1B (ENSOARG00020021769) ENSOARG00020022107 FAM122A (ENSOARG00020022127) #12 TMEM252 (ENSOARG00020022146) #13 PGM5 (ENSOARG00020022177) #14 ENSOARG00020022393 #16 DOCK8 (ENSOARG00020022900) #17 KANK1 (ENSOARG00020024004) #18 DMRT1 (ENSOARG00020024107) #19 DMRT3 (ENSOARG00020024138) #20 DMRT2 (ENSOARG00020024148) #21 SMARCA2 (ENSOARG00020024243) #22 VLDLR (ENSOARG00020024482) #24 ENSOARG00020024556 KCNV2 (ENSOARG00020006537) #25 PUM3 (ENSOARG00020006587) #26 ENSOARG00020006681 RFX3 (ENSOARG00020006756) #27 GLIS3 (ENSOARG00020007233) #28 SLC1A1 (ENSOARG00020007364) #29 PLPP6 (ENSOARG00020007422) #31 ENSOARG00020007455 CDC37L1 (ENSOARG00020007479) #32 AK3 (ENSOARG00020007523) #33 RCL1 (ENSOARG00020007598) #34 JAK2 (ENSOARG00020007686) #35 ENSOARG00020007887 #36 Bovinae ANCESTRAL SPECIES 14 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 American bison MODERN SPECIES 3328 ENTREP1 (ENSBBBG00000004748) #9 TJP2 (ENSBBBG00000018750) #10 FXN (ENSBBBG00000018035) #11 PIP5K1B (ENSBBBG00000008201) PABIR1 (ENSBBBG00000017969) #12 TMEM252 (ENSBBBG00000017966) #13 PGM5 (ENSBBBG00000004418) #14 ENSBBBG00000017925 ENSBBBG00000017865 #16 DOCK8 (ENSBBBG00000017006) #17 ENSBBBG00000000733 KANK1 (ENSBBBG00000007906) #18 DMRT1 (ENSBBBG00000016649) #19 DMRT3 (ENSBBBG00000016636) #20 DMRT2 (ENSBBBG00000016627) #21 SMARCA2 (ENSBBBG00000004105) #22 ENSBBBG00000016209 VLDLR (ENSBBBG00000008333) #24 ENSBBBG00000007174 KCNV2 (ENSBBBG00000016123) #25 PUM3 (ENSBBBG00000007035) #26 RFX3 (ENSBBBG00000003993) #27 GLIS3 (ENSBBBG00000016019) #28 SLC1A1 (ENSBBBG00000015989) #29 SPATA6L (ENSBBBG00000015978) #30 PLPP6 (ENSBBBG00000015953) #31 ENSBBBG00000003969 CDC37L1 (ENSBBBG00000002586) #32 AK3 (ENSBBBG00000003960) #33 RCL1 (ENSBBBG00000015884) #34 JAK2 (ENSBBBG00000015845) #35 Bos ANCESTRAL SPECIES 10 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.a.b.b.a ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00390000000375 Bos_b ANCESTRAL SPECIES 3 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.a.b.b.a ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00390000000375 Hybrid Bos Indicus MODERN SPECIES 27 APBA1 (ENSBIXG00005000159) #8 ENTREP1 (ENSBIXG00005015945) #9 TJP2 (ENSBIXG00005016444) #10 FXN (ENSBIXG00005016495) #11 PIP5K1B (ENSBIXG00005002661) TMEM252 (ENSBIXG00005002669) #13 ENSBIXG00005002670 PGM5 (ENSBIXG00005016605) #14 ENSBIXG00005016626 #15 ENSBIXG00005017167 #16 DOCK8 (ENSBIXG00005002913) #17 KANK1 (ENSBIXG00005018119) #18 DMRT1 (ENSBIXG00005018189) #19 DMRT3 (ENSBIXG00005018199) #20 DMRT2 (ENSBIXG00005018266) #21 SMARCA2 (ENSBIXG00005018551) #22 ENSBIXG00005005990 VLDLR (ENSBIXG00005003037) #24 KCNV2 (ENSBIXG00005018778) #25 PUM3 (ENSBIXG00005018805) #26 ENSBIXG00005018899 RFX3 (ENSBIXG00005003091) #27 GLIS3 (ENSBIXG00005002642) #28 ENSBIXG00005019106 SLC1A1 (ENSBIXG00005019133) #29 PLPP6 (ENSBIXG00005019138) #31 ENSBIXG00005019159 SPATA6L (ENSBIXG00005019220) #30 CDC37L1 (ENSBIXG00005019277) #32 AK3 (ENSBIXG00005019326) #33 RCL1 (ENSBIXG00005019414) #34 Cow MODERN SPECIES 27 ENTREP1 (ENSBTAG00000011173) #9 TJP2 (ENSBTAG00000011770) #10 FXN (ENSBTAG00000001306) #11 PIP5K1B (ENSBTAG00000009917) TMEM252 (ENSBTAG00000011874) #13 ENSBTAG00000049235 PGM5 (ENSBTAG00000033190) #14 ENSBTAG00000033122 #15 ENSBTAG00000000269 #16 ENSBTAG00000049728 DOCK8 (ENSBTAG00000002190) #17 KANK1 (ENSBTAG00000010976) #18 DMRT1 (ENSBTAG00000033352) #19 DMRT3 (ENSBTAG00000017800) #20 DMRT2 (ENSBTAG00000008062) #21 SMARCA2 (ENSBTAG00000007494) #22 ENSBTAG00000051041 ENSBTAG00000048500 VLDLR (ENSBTAG00000018517) #24 KCNV2 (ENSBTAG00000017884) #25 PUM3 (ENSBTAG00000013357) #26 RFX3 (ENSBTAG00000000819) #27 ENSBTAG00000014467 ENSBTAG00000052736 SLC1A1 (ENSBTAG00000019125) PLPP6 (ENSBTAG00000011050) ENSBTAG00000046486 SPATA6L (ENSBTAG00000011048) CDC37L1 (ENSBTAG00000017137) AK3 (ENSBTAG00000017147) RCL1 (ENSBTAG00000018667) Bos_a ANCESTRAL SPECIES 30 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT01100000263480.a.a.b.b.b.a.a.a.a.a.b.b.a.b.b.a ENSGT00940000158126 #14 ENSGT00390000009110.fb ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00910000144347.a.a ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Domestic yak MODERN SPECIES 26 TJP2 (ENSBGRG00000001216) #10 ENSBGRG00000002457 #11 PIP5K1B (ENSBGRG00000002519) TMEM252 (ENSBGRG00000002724) #13 PGM5 (ENSBGRG00000002775) #14 ENSBGRG00000002858 ENSBGRG00000002865 ENSBGRG00000002878 #15 ENSBGRG00000002972 #16 DOCK8 (ENSBGRG00000003466) #17 ENSBGRG00000003655 KANK1 (ENSBGRG00000003717) #18 DMRT1 (ENSBGRG00000003868) #19 DMRT3 (ENSBGRG00000003946) #20 DMRT2 (ENSBGRG00000003984) #21 SMARCA2 (ENSBGRG00000004107) #22 VLDLR (ENSBGRG00000004545) #24 KCNV2 (ENSBGRG00000004767) #25 PUM3 (ENSBGRG00000004833) #26 ENSBGRG00000004951 RFX3 (ENSBGRG00000004985) #27 ENSBGRG00000005081 ENSBGRG00000005096 GLIS3 (ENSBGRG00000005123) #28 SLC1A1 (ENSBGRG00000005214) #29 SPATA6L (ENSBGRG00000005420) #30 PLPP6 (ENSBGRG00000005557) #31 ENSBGRG00000005568 CDC37L1 (ENSBGRG00000005637) #32 AK3 (ENSBGRG00000005727) #33 RCL1 (ENSBGRG00000005812) #34 Wild yak MODERN SPECIES 1150 FXN (ENSBMUG00000009346) #11 PIP5K1B (ENSBMUG00000009326) TMEM252 (ENSBMUG00000009272) #13 PGM5 (ENSBMUG00000009266) #14 ENSBMUG00000009246 ENSBMUG00000009244 #15 ENSBMUG00000008736 #16 DOCK8 (ENSBMUG00000008468) #17 KANK1 (ENSBMUG00000008397) #18 ENSBMUG00000008309 #19 DMRT3 (ENSBMUG00000008302) #20 DMRT2 (ENSBMUG00000008275) #21 SMARCA2 (ENSBMUG00000008202) #22 Cetacea ANCESTRAL SPECIES 9 ENSGT00990000210075 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00940000164995 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Blue whale MODERN SPECIES 17 ENSBMSG00010001005 TJP2 (ENSBMSG00010000778) #10 FXN (ENSBMSG00010000687) #11 PIP5K1B (ENSBMSG00010000638) ENSBMSG00010000615 #12 TMEM252 (ENSBMSG00010000603) #13 PGM5 (ENSBMSG00010000557) #14 ENSBMSG00010000512 #15 ENSBMSG00010000431 DOCK8 (ENSBMSG00010000177) #17 ENSBMSG00010000100 KANK1 (ENSBMSG00010000089) #18 DMRT1 (ENSBMSG00010004442) #19 DMRT3 (ENSBMSG00010004420) #20 DMRT2 (ENSBMSG00010004396) #21 SMARCA2 (ENSBMSG00010004262) #22 VLDLR (ENSBMSG00010004233) #24 KCNV2 (ENSBMSG00010004219) #25 PUM3 (ENSBMSG00010004204) #26 RFX3 (ENSBMSG00010004165) #27 GLIS3 (ENSBMSG00010004124) #28 SLC1A1 (ENSBMSG00010004095) #29 PLPP6 (ENSBMSG00010004080) #31 SPATA6L (ENSBMSG00010004050) #30 CDC37L1 (ENSBMSG00010004036) #32 AK3 (ENSBMSG00010004013) #33 RCL1 (ENSBMSG00010003993) #34 JAK2 (ENSBMSG00010003969) #35 INSL6 (ENSBMSG00010003955) #36 ENSBMSG00010003948 #37 PLGRKT (ENSBMSG00010003942) Odontoceti ANCESTRAL SPECIES 8 ENSGT00390000005811.f #11 ENSGT00990000210075 ENSGT00390000005811.e.a #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000165777.a.a ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Odontoceti_a ANCESTRAL SPECIES 15 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.f #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000165777.a.a ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Dolphin MODERN SPECIES 2679 SMARCA2 (ENSTTRG00000002033) #22 Odontoceti_b ANCESTRAL SPECIES 8 ENSGT00940000158634 #10 ENSGT00390000005811.f.b #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000165777.a.a ENSGT01050000244891.A.c.a.a ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Monodontidae ANCESTRAL SPECIES 5 ENSGT00940000158634 #10 ENSGT00390000005811.f.b #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000165777.a.a ENSGT01050000244891.A.c.a.a ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Narwhal MODERN SPECIES 312 TJP2 (ENSMMNG00015013657) #10 FXN (ENSMMNG00015013572) #11 PIP5K1B (ENSMMNG00015013540) PABIR1 (ENSMMNG00015013514) #12 TMEM252 (ENSMMNG00015013503) #13 PGM5 (ENSMMNG00015013485) #14 ENSMMNG00015013464 #15 ENSMMNG00015013419 #16 DOCK8 (ENSMMNG00015013245) #17 KANK1 (ENSMMNG00015013138) #18 DMRT1 (ENSMMNG00015013112) #19 DMRT3 (ENSMMNG00015013099) #20 DMRT2 (ENSMMNG00015013077) #21 ENSMMNG00015021427 ENSMMNG00015021422 SMARCA2 (ENSMMNG00015021345) #22 VLDLR (ENSMMNG00015021252) #24 KCNV2 (ENSMMNG00015021226) #25 PUM3 (ENSMMNG00015021202) #26 ENSMMNG00015021179 RFX3 (ENSMMNG00015021042) #27 GLIS3 (ENSMMNG00015021011) #28 SLC1A1 (ENSMMNG00015020990) #29 PLPP6 (ENSMMNG00015020983) #31 SPATA6L (ENSMMNG00015020944) #30 CDC37L1 (ENSMMNG00015020918) #32 AK3 (ENSMMNG00015020890) #33 RCL1 (ENSMMNG00015020841) #34 JAK2 (ENSMMNG00015020808) #35 ENSMMNG00015020785 #36 ENSMMNG00015020775 #37 Beluga whale MODERN SPECIES 50 FXN (ENSDLEG00000011543) #11 PIP5K1B (ENSDLEG00000011558) PABIR1 (ENSDLEG00000011588) #12 TMEM252 (ENSDLEG00000011598) #13 PGM5 (ENSDLEG00000011615) #14 ENSDLEG00000011631 #15 ENSDLEG00000011652 #16 DOCK8 (ENSDLEG00000012329) #17 KANK1 (ENSDLEG00000019090) #18 DMRT1 (ENSDLEG00000019261) #19 DMRT3 (ENSDLEG00000019280) #20 ENSDLEG00000019284 ##21 DMRT2 (ENSDLEG00000019289) #21 ENSDLEG00000019303 ENSDLEG00000019309 SMARCA2 (ENSDLEG00000019318) #22 VLDLR (ENSDLEG00000019340) #24 KCNV2 (ENSDLEG00000019382) #25 PUM3 (ENSDLEG00000019389) #26 RFX3 (ENSDLEG00000019460) #27 ENSDLEG00000019514 #28 ENSDLEG00000019522 SLC1A1 (ENSDLEG00000019531) #29 ENSDLEG00000019547 #30 ENSDLEG00000019609 #30 PLPP6 (ENSDLEG00000019637) #31 CDC37L1 (ENSDLEG00000019644) #32 AK3 (ENSDLEG00000019654) #33 RCL1 (ENSDLEG00000019668) #34 JAK2 (ENSDLEG00000019680) #35 ENSDLEG00000019692 #36 Vaquita MODERN SPECIES 17 ENSPSNG00000015625 #11 ENSPSNG00000015658 PIP5K1B (ENSPSNG00000015709) PABIR1 (ENSPSNG00000016069) #12 TMEM252 (ENSPSNG00000016104) #13 PGM5 (ENSPSNG00000016170) #14 ENSPSNG00000016403 #15 ENSPSNG00000016463 #16 DOCK8 (ENSPSNG00000016745) #17 KANK1 (ENSPSNG00000018178) #18 DMRT1 (ENSPSNG00000018301) #19 DMRT3 (ENSPSNG00000018387) #20 DMRT2 (ENSPSNG00000018429) #21 ENSPSNG00000018606 ENSPSNG00000018632 SMARCA2 (ENSPSNG00000018802) #22 VLDLR (ENSPSNG00000019297) #24 KCNV2 (ENSPSNG00000019443) #25 PUM3 (ENSPSNG00000019496) #26 RFX3 (ENSPSNG00000019643) #27 GLIS3 (ENSPSNG00000019903) #28 SLC1A1 (ENSPSNG00000019992) #29 SPATA6L (ENSPSNG00000020084) #30 PLPP6 (ENSPSNG00000020203) #31 CDC37L1 (ENSPSNG00000020228) #32 AK3 (ENSPSNG00000020263) #33 RCL1 (ENSPSNG00000020330) #34 JAK2 (ENSPSNG00000020398) #35 ENSPSNG00000020509 #37 PLGRKT (ENSPSNG00000020541) ENSPSNG00000020589 Sperm whale DUPLICATION Sperm whale MODERN SPECIES 925 ENSPCTG00005015514 #22 Sperm whale MODERN SPECIES 20 ENSPCTG00005003835 FXN (ENSPCTG00005003847) #11 PIP5K1B (ENSPCTG00005003865) FAM122A (ENSPCTG00005003904) #12 TMEM252 (ENSPCTG00005003909) #13 PGM5 (ENSPCTG00005003918) #14 ENSPCTG00005003942 #15 ENSPCTG00005004008 #16 DOCK8 (ENSPCTG00005004178) #17 KANK1 (ENSPCTG00005004438) #18 DMRT1 (ENSPCTG00005004498) #19 DMRT3 (ENSPCTG00005004535) #20 DMRT2 (ENSPCTG00005004572) #21 ENSPCTG00005004671 ENSPCTG00005004691 ENSPCTG00005004736 #22 VLDLR (ENSPCTG00005004995) #24 KCNV2 (ENSPCTG00005005193) #25 PUM3 (ENSPCTG00005005228) #26 ENSPCTG00005005299 RFX3 (ENSPCTG00005005359) #27 GLIS3 (ENSPCTG00005005407) #28 SLC1A1 (ENSPCTG00005005440) #29 SPATA6L (ENSPCTG00005005489) #30 PLPP6 (ENSPCTG00005005512) #31 CDC37L1 (ENSPCTG00005005531) #32 AK3 (ENSPCTG00005005584) #33 RCL1 (ENSPCTG00005005644) #34 JAK2 (ENSPCTG00005005720) #35 INSL6 (ENSPCTG00005005856) #36 ENSPCTG00005005885 #37 Camelidae ANCESTRAL SPECIES 5 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000169111 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a.f #37 Alpaca MODERN SPECIES 2909 SMARCA2 (ENSVPAG00000001204) #22 VLDLR (ENSVPAG00000001205) #24 Arabian camel MODERN SPECIES 30 ENTREP1 (ENSCDRG00005002279) #9 TJP2 (ENSCDRG00005002337) #10 FXN (ENSCDRG00005002495) #11 PIP5K1B (ENSCDRG00005002534) PABIR1 (ENSCDRG00005002619) #12 TMEM252 (ENSCDRG00005002626) #13 PGM5 (ENSCDRG00005002644) #14 ENSCDRG00005002664 #15 ENSCDRG00005002760 #16 ENSCDRG00005003094 DOCK8 (ENSCDRG00005003115) #17 KANK1 (ENSCDRG00005003188) #18 DMRT1 (ENSCDRG00005003226) #19 DMRT3 (ENSCDRG00005003237) #20 DMRT2 (ENSCDRG00005003248) #21 ENSCDRG00005003352 #22 VLDLR (ENSCDRG00005003699) #24 KCNV2 (ENSCDRG00005003822) #25 PUM3 (ENSCDRG00005003846) #26 ENSCDRG00005003916 RFX3 (ENSCDRG00005004007) #27 GLIS3 (ENSCDRG00005004109) #28 SLC1A1 (ENSCDRG00005004192) #29 SPATA6L (ENSCDRG00005004284) #30 PLPP6 (ENSCDRG00005004350) #31 CDC37L1 (ENSCDRG00005004358) #32 AK3 (ENSCDRG00005004398) #33 RCL1 (ENSCDRG00005004458) #34 JAK2 (ENSCDRG00005004520) #35 INSL6 (ENSCDRG00005004548) #36 ENSCDRG00005004570 #37 Laurasiatheria_b ANCESTRAL SPECIES 11 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Carnivora ANCESTRAL SPECIES 25 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Caniformia ANCESTRAL SPECIES 29 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000164995 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Canidae ANCESTRAL SPECIES 47 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00990000204089 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120.lb.b #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Red fox DUPLICATION Red fox MODERN SPECIES 37 ENSVVUG00000004075 APBA1 (ENSVVUG00000004105) #8 FAM189A2 (ENSVVUG00000004164) #9 ENSVVUG00000004192 TJP2 (ENSVVUG00000004207) #10 FXN (ENSVVUG00000004304) #11 PIP5K1B (ENSVVUG00000004306) TMEM252 (ENSVVUG00000004338) #13 PGM5 (ENSVVUG00000004340) #14 ENSVVUG00000004359 #16 DOCK8 (ENSVVUG00000004407) #17 KANK1 (ENSVVUG00000004494) #18 DMRT1 (ENSVVUG00000004545) #19 DMRT3 (ENSVVUG00000004555) #20 DMRT2 (ENSVVUG00000004562) #21 ENSVVUG00000004580 #22 ENSVVUG00000004598 #22 VLDLR (ENSVVUG00000004925) #24 ENSVVUG00000006514 KCNV2 (ENSVVUG00000006518) #25 PUM3 (ENSVVUG00000006527) #26 ENSVVUG00000006545 RFX3 (ENSVVUG00000006609) #27 GLIS3 (ENSVVUG00000007122) #28 SLC1A1 (ENSVVUG00000007200) #29 SPATA6L (ENSVVUG00000007223) #30 ENSVVUG00000007267 #31 CDC37L1 (ENSVVUG00000007275) #32 AK3 (ENSVVUG00000007282) #33 RCL1 (ENSVVUG00000007304) #34 JAK2 (ENSVVUG00000007315) #35 Red fox MODERN SPECIES 37 APBA1 (ENSVVUG00000004105) #8 FAM189A2 (ENSVVUG00000004164) #9 ENSVVUG00000004192 TJP2 (ENSVVUG00000004207) #10 FXN (ENSVVUG00000004304) #11 PIP5K1B (ENSVVUG00000004306) TMEM252 (ENSVVUG00000004338) #13 PGM5 (ENSVVUG00000004340) #14 ENSVVUG00000004359 #16 DOCK8 (ENSVVUG00000004407) #17 KANK1 (ENSVVUG00000004494) #18 DMRT1 (ENSVVUG00000004545) #19 DMRT3 (ENSVVUG00000004555) #20 DMRT2 (ENSVVUG00000004562) #21 ENSVVUG00000004580 #22 ENSVVUG00000004598 #22 VLDLR (ENSVVUG00000004925) #24 ENSVVUG00000006514 KCNV2 (ENSVVUG00000006518) #25 PUM3 (ENSVVUG00000006527) #26 ENSVVUG00000006545 RFX3 (ENSVVUG00000006609) #27 GLIS3 (ENSVVUG00000007122) #28 SLC1A1 (ENSVVUG00000007200) #29 SPATA6L (ENSVVUG00000007223) #30 ENSVVUG00000007267 #31 CDC37L1 (ENSVVUG00000007275) #32 AK3 (ENSVVUG00000007282) #33 RCL1 (ENSVVUG00000007304) #34 JAK2 (ENSVVUG00000007315) #35 INSL6 (ENSVVUG00000007335) #36 Canis_lupus ANCESTRAL SPECIES ENSGT00990000204089 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00950000183030.m.a.b.a.a.a ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00950000182772.A.a.b.n.b ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120.lb.b #33 ENSGT00530000063404.a #34 ENSGT01050000248397 ENSGT00940000155640 #35 Dog MODERN SPECIES ENTREP1 (ENSCAFG00845000882) #9 ENSCAFG00845000920 TJP2 (ENSCAFG00845001062) #10 FXN (ENSCAFG00845001342) #11 PIP5K1B (ENSCAFG00845001394) TMEM252 (ENSCAFG00845001485) #13 PGM5 (ENSCAFG00845001506) #14 ENSCAFG00845001539 ZNG1A (ENSCAFG00845001577) #16 DOCK8 (ENSCAFG00845001647) #17 KANK1 (ENSCAFG00845001908) #18 DMRT1 (ENSCAFG00845001983) #19 DMRT3 (ENSCAFG00845002003) #20 DMRT2 (ENSCAFG00845002026) #21 ENSCAFG00845002045 SMARCA2 (ENSCAFG00845002161) #22 VLDLR (ENSCAFG00845002345) #24 KCNV2 (ENSCAFG00845002424) #25 PUM3 (ENSCAFG00845002440) #26 ENSCAFG00845002474 RFX3 (ENSCAFG00845002562) #27 ENSCAFG00845002739 GLIS3 (ENSCAFG00845002759) #28 SLC1A1 (ENSCAFG00845002818) #29 SPATA6L (ENSCAFG00845002856) #30 PLPP6 (ENSCAFG00845002916) #31 CDC37L1 (ENSCAFG00845015553) #32 ENSCAFG00845015626 #33 ENSCAFG00845015667 JAK2 (ENSCAFG00845015728) #34 ENSCAFG00845015836 Dingo DUPLICATION Dingo MODERN SPECIES 125 ENSCAFG00020026606 PIP5K1B (ENSCAFG00020026608) PABIR1 (ENSCAFG00020026613) #12 TMEM252 (ENSCAFG00020026616) #13 PGM5 (ENSCAFG00020026619) #14 ENSCAFG00020026621 ENSCAFG00020026623 #16 ENSCAFG00020026625 ENSCAFG00020026627 DOCK8 (ENSCAFG00020026637) #17 KANK1 (ENSCAFG00020026742) #18 DMRT1 (ENSCAFG00020026750) #19 DMRT3 (ENSCAFG00020026752) #20 DMRT2 (ENSCAFG00020026753) #21 ENSCAFG00020026759 ENSCAFG00020026766 #22 ENSCAFG00020026802 #22 ENSCAFG00020026863 VLDLR (ENSCAFG00020026865) #24 KCNV2 (ENSCAFG00020026866) #25 PUM3 (ENSCAFG00020026867) #26 RFX3 (ENSCAFG00020026868) #27 ENSCAFG00020026870 GLIS3 (ENSCAFG00020000104) #28 SLC1A1 (ENSCAFG00020000361) #29 SPATA6L (ENSCAFG00020000384) #30 PLPP6 (ENSCAFG00020000503) #31 CDC37L1 (ENSCAFG00020000516) #32 ENSCAFG00020000594 #33 ENSCAFG00020000622 RCL1 (ENSCAFG00020000638) #34 Dingo MODERN SPECIES 125 PIP5K1B (ENSCAFG00020026608) PABIR1 (ENSCAFG00020026613) #12 TMEM252 (ENSCAFG00020026616) #13 PGM5 (ENSCAFG00020026619) #14 ENSCAFG00020026621 ENSCAFG00020026623 #16 ENSCAFG00020026625 ENSCAFG00020026627 DOCK8 (ENSCAFG00020026637) #17 KANK1 (ENSCAFG00020026742) #18 DMRT1 (ENSCAFG00020026750) #19 DMRT3 (ENSCAFG00020026752) #20 DMRT2 (ENSCAFG00020026753) #21 ENSCAFG00020026759 ENSCAFG00020026766 #22 ENSCAFG00020026802 #22 ENSCAFG00020026863 VLDLR (ENSCAFG00020026865) #24 KCNV2 (ENSCAFG00020026866) #25 PUM3 (ENSCAFG00020026867) #26 RFX3 (ENSCAFG00020026868) #27 ENSCAFG00020026870 GLIS3 (ENSCAFG00020000104) #28 SLC1A1 (ENSCAFG00020000361) #29 SPATA6L (ENSCAFG00020000384) #30 PLPP6 (ENSCAFG00020000503) #31 CDC37L1 (ENSCAFG00020000516) #32 ENSCAFG00020000594 #33 ENSCAFG00020000622 RCL1 (ENSCAFG00020000638) #34 ENSCAFG00020000655 Caniformia_b ANCESTRAL SPECIES 32 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Mustelinae ANCESTRAL SPECIES 87 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00940000160907 #31 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a #37 American mink MODERN SPECIES 72 APBA1 (ENSNVIG00000010432) #8 ENTREP1 (ENSNVIG00000010390) #9 TJP2 (ENSNVIG00000009677) #10 ENSNVIG00000009630 FXN (ENSNVIG00000009610) #11 PIP5K1B (ENSNVIG00000009548) CI071 (ENSNVIG00000009508) #13 PGM5 (ENSNVIG00000009442) #14 ENSNVIG00000009420 #15 ENSNVIG00000008929 DOCK8 (ENSNVIG00000008726) #17 KANK1 (ENSNVIG00000008630) #18 DMRT1 (ENSNVIG00000008608) #19 DMRT3 (ENSNVIG00000008601) #20 DMRT2 (ENSNVIG00000008589) #21 SMARCA2 (ENSNVIG00000008097) #22 VLDLR (ENSNVIG00000008014) #24 KCNV2 (ENSNVIG00000007991) #25 K0020 (ENSNVIG00000007919) #26 RFX3 (ENSNVIG00000007796) #27 Ferret MODERN SPECIES 281 ENSMPUG00000005707 DOCK8 (ENSMPUG00000005223) #17 KANK1 (ENSMPUG00000005216) #18 DMRT1 (ENSMPUG00000005204) #19 DMRT2 (ENSMPUG00000005199) #21 ENSMPUG00000005192 SMARCA2 (ENSMPUG00000005171) #22 ENSMPUG00000005169 VLDLR (ENSMPUG00000005155) #24 KCNV2 (ENSMPUG00000005137) #25 PUM3 (ENSMPUG00000005125) #26 ENSMPUG00000005120 RFX3 (ENSMPUG00000005101) #27 GLIS3 (ENSMPUG00000005095) #28 SLC1A1 (ENSMPUG00000005081) #29 SPATA6L (ENSMPUG00000005024) #30 CDC37L1 (ENSMPUG00000005018) #32 AK3 (ENSMPUG00000005006) #33 RCL1 (ENSMPUG00000004998) #34 JAK2 (ENSMPUG00000004974) #35 INSL6 (ENSMPUG00000004968) #36 ENSMPUG00000004961 #37 Ursidae ANCESTRAL SPECIES 43 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a #37 Giant Panda MODERN SPECIES 8 PTAR1 (ENSAMEG00000007011) #7 APBA1 (ENSAMEG00000006989) #8 ENTREP1 (ENSAMEG00000006981) #9 TJP2 (ENSAMEG00000006921) #10 ENSAMEG00000006915 #11 PIP5K1B (ENSAMEG00000008089) TMEM252 (ENSAMEG00000008083) #13 PGM5 (ENSAMEG00000008064) #14 ENSAMEG00000025926 #15 ENSAMEG00000006824 #16 DOCK8 (ENSAMEG00000006698) #17 KANK1 (ENSAMEG00000006667) #18 DMRT3 (ENSAMEG00000006664) #20 DMRT2 (ENSAMEG00000006648) #21 ENSAMEG00000019747 SMARCA2 (ENSAMEG00000012325) #22 ENSAMEG00000027822 VLDLR (ENSAMEG00000012233) #24 KCNV2 (ENSAMEG00000012228) #25 PUM3 (ENSAMEG00000012187) #26 ENSAMEG00000012183 RFX3 (ENSAMEG00000012132) #27 GLIS3 (ENSAMEG00000002733) #28 SLC1A1 (ENSAMEG00000002682) #29 ENSAMEG00000002674 #30 CDC37L1 (ENSAMEG00000002657) #32 AK3 (ENSAMEG00000002640) #33 RCL1 (ENSAMEG00000002631) #34 JAK2 (ENSAMEG00000009661) #35 INSL6 (ENSAMEG00000009778) #36 ENSAMEG00000009780 #37 Ursus ANCESTRAL SPECIES 50 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT00940000166172 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120.hb.a #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Polar bear DUPLICATION Polar bear MODERN SPECIES 171 CFAP95 (ENSUMAG00000021672) PTAR1 (ENSUMAG00000021667) #7 APBA1 (ENSUMAG00000021636) #8 ENTREP1 (ENSUMAG00000021620) #9 TJP2 (ENSUMAG00000020541) #10 ENSUMAG00000020328 #11 PIP5K1B (ENSUMAG00000020312) PABIR1 (ENSUMAG00000020302) #12 TMEM252 (ENSUMAG00000020280) #13 PGM5 (ENSUMAG00000020142) #14 ENSUMAG00000020081 #16 DOCK8 (ENSUMAG00000019524) #17 KANK1 (ENSUMAG00000019362) #18 ENSUMAG00000019350 #19 DMRT2 (ENSUMAG00000019339) #21 ENSUMAG00000019328 #22 ENSUMAG00000019303 #22 VLDLR (ENSUMAG00000018747) #24 KCNV2 (ENSUMAG00000018690) #25 PUM3 (ENSUMAG00000018443) #26 ENSUMAG00000018187 ENSUMAG00000018118 RFX3 (ENSUMAG00000018101) #27 GLIS3 (ENSUMAG00000018031) #28 SLC1A1 (ENSUMAG00000017970) #29 ENSUMAG00000017954 #31 SPATA6L (ENSUMAG00000017942) #30 CDC37L1 (ENSUMAG00000017926) #32 ENSUMAG00000017904 #33 RCL1 (ENSUMAG00000017890) #34 JAK2 (ENSUMAG00000016820) #35 Polar bear MODERN SPECIES 171 PTAR1 (ENSUMAG00000021667) #7 APBA1 (ENSUMAG00000021636) #8 ENTREP1 (ENSUMAG00000021620) #9 TJP2 (ENSUMAG00000020541) #10 ENSUMAG00000020328 #11 PIP5K1B (ENSUMAG00000020312) PABIR1 (ENSUMAG00000020302) #12 TMEM252 (ENSUMAG00000020280) #13 PGM5 (ENSUMAG00000020142) #14 ENSUMAG00000020081 #16 DOCK8 (ENSUMAG00000019524) #17 KANK1 (ENSUMAG00000019362) #18 ENSUMAG00000019350 #19 DMRT2 (ENSUMAG00000019339) #21 ENSUMAG00000019328 #22 ENSUMAG00000019303 #22 VLDLR (ENSUMAG00000018747) #24 KCNV2 (ENSUMAG00000018690) #25 PUM3 (ENSUMAG00000018443) #26 ENSUMAG00000018187 ENSUMAG00000018118 RFX3 (ENSUMAG00000018101) #27 GLIS3 (ENSUMAG00000018031) #28 SLC1A1 (ENSUMAG00000017970) #29 ENSUMAG00000017954 #31 SPATA6L (ENSUMAG00000017942) #30 CDC37L1 (ENSUMAG00000017926) #32 ENSUMAG00000017904 #33 RCL1 (ENSUMAG00000017890) #34 JAK2 (ENSUMAG00000016820) #35 INSL6 (ENSUMAG00000016724) #36 American black bear DUPLICATION American black bear MODERN SPECIES 1533 SMARCA2 (ENSUAMG00000024701) #22 American black bear MODERN SPECIES 2359 ENSUAMG00000008012 #22 Felidae ANCESTRAL SPECIES 28 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00950000183123.g.a.a.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155028.q.b.e.b ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Cat MODERN SPECIES 244 ENTREP1 (ENSFCAG00000014622) #9 TJP2 (ENSFCAG00000008814) #10 FXN (ENSFCAG00000031454) #11 PIP5K1B (ENSFCAG00000008812) ENSFCAG00000050603 TMEM252 (ENSFCAG00000008053) #13 PGM5 (ENSFCAG00000008050) #14 ENSFCAG00000043244 #15 ENSFCAG00000012045 #16 ENSFCAG00000047266 DOCK8 (ENSFCAG00000012046) #17 KANK1 (ENSFCAG00000006458) #18 DMRT1 (ENSFCAG00000006459) #19 DMRT3 (ENSFCAG00000036847) #20 DMRT2 (ENSFCAG00000006461) #21 SMARCA2 (ENSFCAG00000001568) #22 ENSFCAG00000041218 VLDLR (ENSFCAG00000013257) #24 KCNV2 (ENSFCAG00000004335) #25 ENSFCAG00000013260 RFX3 (ENSFCAG00000012950) #27 GLIS3 (ENSFCAG00000046401) #28 ENSFCAG00000037557 SLC1A1 (ENSFCAG00000023590) #29 PLPP6 (ENSFCAG00000038113) #31 SPATA6L (ENSFCAG00000002369) #30 CDC37L1 (ENSFCAG00000027076) #32 AK3 (ENSFCAG00000028063) #33 RCL1 (ENSFCAG00000014557) #34 JAK2 (ENSFCAG00000028588) #35 INSL6 (ENSFCAG00000044599) #36 Panthera ANCESTRAL SPECIES 34 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00950000183123.g.a.a.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155028.q.b.e.b ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 Panthera_a ANCESTRAL SPECIES 35 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00950000183123.g.a.a.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 leopard MODERN SPECIES 42 APBA1 (ENSPPRG00000007808) #8 ENTREP1 (ENSPPRG00000007577) #9 TJP2 (ENSPPRG00000007262) #10 FXN (ENSPPRG00000006297) #11 PIP5K1B (ENSPPRG00000006228) ENSPPRG00000005893 TMEM252 (ENSPPRG00000005826) #13 PGM5 (ENSPPRG00000005783) #14 ENSPPRG00000005661 #15 ENSPPRG00000005315 #16 DOCK8 (ENSPPRG00000003143) #17 KANK1 (ENSPPRG00000002516) #18 DMRT1 (ENSPPRG00000002380) #19 DMRT3 (ENSPPRG00000002367) #20 DMRT2 (ENSPPRG00000002109) #21 SMARCA2 (ENSPPRG00000001879) #22 ENSPPRG00000001027 VLDLR (ENSPPRG00000000915) #24 KCNV2 (ENSPPRG00000000862) #25 PUM3 (ENSPPRG00000000809) #26 ENSPPRG00000000748 RFX3 (ENSPPRG00000000606) #27 GLIS3 (ENSPPRG00000000400) #28 SLC1A1 (ENSPPRG00000000232) #29 SPATA6L (ENSPPRG00000000218) #30 PLPP6 (ENSPPRG00000019670) #31 CDC37L1 (ENSPPRG00000000059) #32 AK3 (ENSPPRG00000000041) #33 RCL1 (ENSPPRG00000022645) #34 JAK2 (ENSPPRG00000022744) #35 INSL6 (ENSPPRG00000022777) #36 lion MODERN SPECIES 13 PTAR1 (ENSPLOG00000013055) #7 APBA1 (ENSPLOG00000013238) #8 ENTREP1 (ENSPLOG00000013369) #9 TJP2 (ENSPLOG00000013563) #10 FXN (ENSPLOG00000013999) #11 PIP5K1B (ENSPLOG00000014086) TMEM252 (ENSPLOG00000014372) #13 PGM5 (ENSPLOG00000014414) #14 ENSPLOG00000014655 #15 ENSPLOG00000014827 #16 DOCK8 (ENSPLOG00000015754) #17 KANK1 (ENSPLOG00000016894) #18 DMRT1 (ENSPLOG00000017065) #19 DMRT3 (ENSPLOG00000017150) #20 DMRT2 (ENSPLOG00000017190) #21 SMARCA2 (ENSPLOG00000017478) #22 ENSPLOG00000017911 VLDLR (ENSPLOG00000017962) #24 KCNV2 (ENSPLOG00000018027) #25 PUM3 (ENSPLOG00000018076) #26 ENSPLOG00000018220 RFX3 (ENSPLOG00000018336) #27 GLIS3 (ENSPLOG00000018479) #28 SLC1A1 (ENSPLOG00000018538) #29 SPATA6L (ENSPLOG00000018652) #30 PLPP6 (ENSPLOG00000018812) #31 CDC37L1 (ENSPLOG00000018840) #32 AK3 (ENSPLOG00000018913) #33 RCL1 (ENSPLOG00000019004) #34 JAK2 (ENSPLOG00000019062) #35 INSL6 (ENSPLOG00000019128) #36 Tiger DUPLICATION Tiger MODERN SPECIES 463 ENSPTIG00000015817 #22 ENSPTIG00000010794 #22 ENSPTIG00000009737 VLDLR (ENSPTIG00000005593) #24 PUM3 (ENSPTIG00000021934) #26 ENSPTIG00000021167 RFX3 (ENSPTIG00000017617) #27 GLIS3 (ENSPTIG00000015969) #28 ENSPTIG00000014983 SLC1A1 (ENSPTIG00000013599) #29 SPATA6L (ENSPTIG00000011794) #30 CDC37L1 (ENSPTIG00000008469) #32 AK3 (ENSPTIG00000000703) #33 RCL1 (ENSPTIG00000019031) #34 JAK2 (ENSPTIG00000016939) #35 INSL6 (ENSPTIG00000016722) #36 Tiger MODERN SPECIES 463 ENSPTIG00000015817 #22 ENSPTIG00000010794 #22 ENSPTIG00000009737 VLDLR (ENSPTIG00000005593) #24 PUM3 (ENSPTIG00000021934) #26 ENSPTIG00000021167 RFX3 (ENSPTIG00000017617) #27 GLIS3 (ENSPTIG00000015969) #28 ENSPTIG00000014983 SLC1A1 (ENSPTIG00000013599) #29 SPATA6L (ENSPTIG00000011794) #30 CDC37L1 (ENSPTIG00000008469) #32 AK3 (ENSPTIG00000000703) #33 RCL1 (ENSPTIG00000019031) #34 JAK2 (ENSPTIG00000016939) #35 INSL6 (ENSPTIG00000016722) #36 ENSPTIG00000016439 #37 Laurasiatheria_c ANCESTRAL SPECIES 11 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Equus ANCESTRAL SPECIES 37 ENSGT00940000158634 #10 ENSGT00390000005811.m #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00410000028750 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00520000061590 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Horse DUPLICATION Horse MODERN SPECIES 15 TJP2 (ENSECAG00000016742) #10 FXN (ENSECAG00000019174) #11 PIP5K1B (ENSECAG00000019992) PABIR1 (ENSECAG00000003116) #12 ENSECAG00000044520 PGM5 (ENSECAG00000010805) #14 TMEM252 (ENSECAG00000010049) #13 ENSECAG00000003227 #15 ENSECAG00000014036 #16 ENSECAG00000041352 DOCK8 (ENSECAG00000011917) #17 KANK1 (ENSECAG00000016219) #18 DMRT1 (ENSECAG00000060160) #19 DMRT3 (ENSECAG00000023412) #20 DMRT2 (ENSECAG00000035701) #21 ENSECAG00000047891 #22 ENSECAG00000045647 #22 VLDLR (ENSECAG00000021859) #24 ENSECAG00000037169 KCNV2 (ENSECAG00000016602) #25 PUM3 (ENSECAG00000017193) #26 ENSECAG00000009736 RFX3 (ENSECAG00000011075) #27 GLIS3 (ENSECAG00000020544) #28 SLC1A1 (ENSECAG00000010935) #29 SPATA6L (ENSECAG00000021902) #30 PLPP6 (ENSECAG00000023969) #31 CDC37L1 (ENSECAG00000000269) #32 AK3 (ENSECAG00000011235) #33 ENSECAG00000058759 RCL1 (ENSECAG00000015973) #34 Horse MODERN SPECIES 15 FXN (ENSECAG00000019174) #11 PIP5K1B (ENSECAG00000019992) PABIR1 (ENSECAG00000003116) #12 ENSECAG00000044520 PGM5 (ENSECAG00000010805) #14 TMEM252 (ENSECAG00000010049) #13 ENSECAG00000003227 #15 ENSECAG00000014036 #16 ENSECAG00000041352 DOCK8 (ENSECAG00000011917) #17 KANK1 (ENSECAG00000016219) #18 DMRT1 (ENSECAG00000060160) #19 DMRT3 (ENSECAG00000023412) #20 DMRT2 (ENSECAG00000035701) #21 ENSECAG00000047891 #22 ENSECAG00000045647 #22 VLDLR (ENSECAG00000021859) #24 ENSECAG00000037169 KCNV2 (ENSECAG00000016602) #25 PUM3 (ENSECAG00000017193) #26 ENSECAG00000009736 RFX3 (ENSECAG00000011075) #27 GLIS3 (ENSECAG00000020544) #28 SLC1A1 (ENSECAG00000010935) #29 SPATA6L (ENSECAG00000021902) #30 PLPP6 (ENSECAG00000023969) #31 CDC37L1 (ENSECAG00000000269) #32 AK3 (ENSECAG00000011235) #33 ENSECAG00000058759 RCL1 (ENSECAG00000015973) #34 JAK2 (ENSECAG00000009119) #35 Donkey DUPLICATION Donkey MODERN SPECIES 15 APBA1 (ENSEASG00005009603) #8 ENTREP1 (ENSEASG00005009605) #9 TJP2 (ENSEASG00005009607) #10 FXN (ENSEASG00005025449) #11 PIP5K1B (ENSEASG00005009622) TMEM252 (ENSEASG00005032638) #13 PGM5 (ENSEASG00005009626) #14 ENSEASG00005009631 #15 ENSEASG00005009634 #16 DOCK8 (ENSEASG00005009734) #17 KANK1 (ENSEASG00005010292) #18 DMRT1 (ENSEASG00005010297) #19 DMRT3 (ENSEASG00005010303) #20 DMRT2 (ENSEASG00005010307) #21 ENSEASG00005032228 #22 ENSEASG00005033232 #22 ENSEASG00005010323 VLDLR (ENSEASG00005010330) #24 KCNV2 (ENSEASG00005010348) #25 PUM3 (ENSEASG00005010350) #26 ENSEASG00005010361 ENSEASG00005010358 RFX3 (ENSEASG00005010402) #27 GLIS3 (ENSEASG00005010634) #28 SLC1A1 (ENSEASG00005010637) #29 PLPP6 (ENSEASG00005010645) #31 SPATA6L (ENSEASG00005010642) #30 CDC37L1 (ENSEASG00005010646) #32 AK3 (ENSEASG00005010651) #33 RCL1 (ENSEASG00005010653) #34 JAK2 (ENSEASG00005010656) #35 Donkey MODERN SPECIES 15 ENSEASG00005024635 #7 APBA1 (ENSEASG00005009603) #8 ENTREP1 (ENSEASG00005009605) #9 TJP2 (ENSEASG00005009607) #10 FXN (ENSEASG00005025449) #11 PIP5K1B (ENSEASG00005009622) TMEM252 (ENSEASG00005032638) #13 PGM5 (ENSEASG00005009626) #14 ENSEASG00005009631 #15 ENSEASG00005009634 #16 DOCK8 (ENSEASG00005009734) #17 KANK1 (ENSEASG00005010292) #18 DMRT1 (ENSEASG00005010297) #19 DMRT3 (ENSEASG00005010303) #20 DMRT2 (ENSEASG00005010307) #21 ENSEASG00005032228 #22 ENSEASG00005033232 #22 ENSEASG00005010323 VLDLR (ENSEASG00005010330) #24 KCNV2 (ENSEASG00005010348) #25 PUM3 (ENSEASG00005010350) #26 ENSEASG00005010361 ENSEASG00005010358 RFX3 (ENSEASG00005010402) #27 GLIS3 (ENSEASG00005010634) #28 SLC1A1 (ENSEASG00005010637) #29 PLPP6 (ENSEASG00005010645) #31 SPATA6L (ENSEASG00005010642) #30 CDC37L1 (ENSEASG00005010646) #32 AK3 (ENSEASG00005010651) #33 RCL1 (ENSEASG00005010653) #34 Chiroptera ANCESTRAL SPECIES 40 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a #37 Megabat MODERN SPECIES 3455 SMARCA2 (ENSPVAG00000000901) #22 Microchiroptera ANCESTRAL SPECIES 36 ENSGT00390000017892 #7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00940000156639 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a #37 Microbat MODERN SPECIES 1067 SMARCA2 (ENSMLUG00000002342) #22 VLDLR (ENSMLUG00000002294) #24 KCNV2 (ENSMLUG00000002304) #25 PUM3 (ENSMLUG00000002309) #26 ENSMLUG00000022735 RFX3 (ENSMLUG00000013765) #27 ENSMLUG00000030513 #28 ENSMLUG00000014482 #28 ENSMLUG00000012988 #29 SPATA6L (ENSMLUG00000012996) #30 PLPP6 (ENSMLUG00000017269) #31 CDC37L1 (ENSMLUG00000017270) #32 AK3 (ENSMLUG00000017272) #33 RCL1 (ENSMLUG00000009654) #34 JAK2 (ENSMLUG00000012756) #35 INSL6 (ENSMLUG00000007982) #36 Greater horseshoe bat MODERN SPECIES 3 CFAP95 (ENSRFEG00010007629) PTAR1 (ENSRFEG00010007537) #7 APBA1 (ENSRFEG00010007458) #8 ENTREP1 (ENSRFEG00010007317) #9 TJP2 (ENSRFEG00010007216) #10 PIP5K1B (ENSRFEG00010006963) TMEM252 (ENSRFEG00010006856) #13 PGM5 (ENSRFEG00010006806) #14 ENSRFEG00010006757 #15 ENSRFEG00010006573 #16 DOCK8 (ENSRFEG00010006288) #17 KANK1 (ENSRFEG00010006153) #18 DMRT1 (ENSRFEG00010006049) #19 DMRT3 (ENSRFEG00010006020) #20 DMRT2 (ENSRFEG00010005950) #21 SMARCA2 (ENSRFEG00010005719) #22 VLDLR (ENSRFEG00010005438) #24 KCNV2 (ENSRFEG00010005355) #25 ENSRFEG00010005315 #26 ENSRFEG00010005258 RFX3 (ENSRFEG00010005210) #27 GLIS3 (ENSRFEG00010005187) #28 SLC1A1 (ENSRFEG00010005159) #29 ENSRFEG00010005145 PLPP6 (ENSRFEG00010005138) #31 SPATA6L (ENSRFEG00010005120) #30 CDC37L1 (ENSRFEG00010015324) #32 AK3 (ENSRFEG00010015150) #33 RCL1 (ENSRFEG00010015039) #34 JAK2 (ENSRFEG00010014972) #35 INSL6 (ENSRFEG00010014917) #36 Atlantogenata ANCESTRAL SPECIES 68 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a #37 Afrotheria ANCESTRAL SPECIES 145 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896.n #28 ENSGT00940000156896.m #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Afrotheria_a ANCESTRAL SPECIES 145 ENSGT00940000156639 ENSGT01050000248464 ENSGT00390000015476.d.b #12 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896.n #28 ENSGT00940000156896.m #28 ENSGT00900000143153 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 Elephant MODERN SPECIES 593 ENSLAFG00000030532 ENSLAFG00000031361 PIP5K1B (ENSLAFG00000007792) ENSLAFG00000027844 PABIR1 (ENSLAFG00000016843) #12 ENSLAFG00000029981 TMEM252 (ENSLAFG00000015792) #13 PGM5 (ENSLAFG00000015785) #14 ENSLAFG00000006679 #16 DOCK8 (ENSLAFG00000010626) #17 ENSLAFG00000010633 #18 ENSLAFG00000031278 #18 ENSLAFG00000010638 #19 DMRT3 (ENSLAFG00000028125) #20 DMRT2 (ENSLAFG00000008510) #21 SMARCA2 (ENSLAFG00000014061) #22 VLDLR (ENSLAFG00000015211) #24 KCNV2 (ENSLAFG00000017292) #25 PUM3 (ENSLAFG00000017341) #26 RFX3 (ENSLAFG00000021602) #27 ENSLAFG00000031654 #28 ENSLAFG00000029971 #28 ENSLAFG00000026125 SLC1A1 (ENSLAFG00000001120) #29 PLPP6 (ENSLAFG00000001123) #31 SPATA6L (ENSLAFG00000001121) #30 CDC37L1 (ENSLAFG00000001125) #32 AK3 (ENSLAFG00000001126) #33 RCL1 (ENSLAFG00000017495) #34 JAK2 (ENSLAFG00000007471) #35 INSL6 (ENSLAFG00000007479) #36 Hyrax MODERN SPECIES 7507 SMARCA2 (ENSPCAG00000016969) #22 Tenrec MODERN SPECIES 8467 ENSETEG00000003898 #22 Xenarthra ANCESTRAL SPECIES 76 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00940000160907 #31 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434.b #36 ENSGT00940000154434.a #37 ENSGT00390000000375 Armadillo MODERN SPECIES 1454 ST8SIA4 (ENSDNOG00000046147) ENSDNOG00000040306 SMARCA2 (ENSDNOG00000006402) #22 VLDLR (ENSDNOG00000001086) #24 KCNV2 (ENSDNOG00000041737) #25 PUM3 (ENSDNOG00000008157) #26 RFX3 (ENSDNOG00000018668) #27 ENSDNOG00000012636 #28 ENSDNOG00000042655 ENSDNOG00000035748 #28 ENSDNOG00000042157 SLC1A1 (ENSDNOG00000001798) #29 SPATA6L (ENSDNOG00000038916) #30 PLPP6 (ENSDNOG00000015974) #31 CDC37L1 (ENSDNOG00000015975) #32 AK3 (ENSDNOG00000038787) #33 RCL1 (ENSDNOG00000019911) #34 JAK2 (ENSDNOG00000008173) #35 Sloth MODERN SPECIES 7973 SMARCA2 (ENSCHOG00000004316) #22 Marsupialia ANCESTRAL SPECIES 6 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000164995 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00940000154259 ENSGT00940000162445 ENSGT00940000156061 ENSGT00940000158226 ENSGT01050000244941.A ENSGT00550000074857 ENSGT00940000160271 ENSGT00390000007773 ENSGT00940000155421.b ENSGT00390000000111.b.b ENSGT00390000002393 ENSGT00440000038745.b ENSGT00730000111088 Marsupialia_b ANCESTRAL SPECIES 11 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00940000154259.n ENSGT00940000162445 ENSGT00940000156061 ENSGT00940000158226 ENSGT01050000244941.A ENSGT00550000074857 ENSGT00940000160271 ENSGT00390000007773 ENSGT00940000155421.b ENSGT00390000000111.b.b ENSGT00390000002393 ENSGT00440000038745.b ENSGT00730000111088 Diprotodontia ANCESTRAL SPECIES 21 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00940000154259.n ENSGT00940000162445 ENSGT00940000156061 ENSGT00940000158226 ENSGT01050000244941.A ENSGT00550000074857 ENSGT00940000160271 ENSGT00390000007773 ENSGT00940000155421.b ENSGT00390000000111.b.b ENSGT00390000002393 ENSGT00440000038745.b ENSGT00730000111088 Diprotodontia_a ANCESTRAL SPECIES 17 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811.a #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000163353 #15 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00940000154259.n ENSGT00940000162445 ENSGT00940000156061 ENSGT00940000158226 ENSGT01050000244941.A ENSGT00550000074857 ENSGT00940000160271 ENSGT00390000007773 ENSGT00940000155421.b ENSGT00390000000111.b.b ENSGT00390000002393 ENSGT00440000038745.b ENSGT00730000111088 koala MODERN SPECIES 92 ENTREP1 (ENSPCIG00000030326) #9 TJP2 (ENSPCIG00000030318) #10 ENSPCIG00000030316 #11 PIP5K1B (ENSPCIG00000030314) ENSPCIG00000030312 #13 PGM5 (ENSPCIG00000030310) #14 ENSPCIG00000030308 #16 ENSPCIG00000031430 ENSPCIG00000035585 #17 ENSPCIG00000030200 #17 KANK1 (ENSPCIG00000030084) #18 ENSPCIG00000030081 DMRT1 (ENSPCIG00000030080) #19 DMRT3 (ENSPCIG00000030078) #20 DMRT2 (ENSPCIG00000030077) #21 SMARCA2 (ENSPCIG00000015658) #22 ENSPCIG00000015665 VLDLR (ENSPCIG00000010606) #24 KCNV2 (ENSPCIG00000010599) #25 ENSPCIG00000010598 ENSPCIG00000032183 SVEP1 (ENSPCIG00000015236) MUSK (ENSPCIG00000015083) LPAR1 (ENSPCIG00000015072) SMC2 (ENSPCIG00000026558) ABCC1 (ENSPCIG00000016945) ENSPCIG00000016944 MYH11 (ENSPCIG00000016933) NDE1 (ENSPCIG00000016924) MARF1 (ENSPCIG00000016908) BMERB1 (ENSPCIG00000016906) Common wonbat MODERN SPECIES 1066 APBA1 (ENSVURG00010007265) #8 ENTREP1 (ENSVURG00010007290) #9 TJP2 (ENSVURG00010007350) #10 ENSVURG00010007444 #11 PIP5K1B (ENSVURG00010007456) ENSVURG00010007484 #13 PGM5 (ENSVURG00010007494) #14 ENSVURG00010007501 #15 ENSVURG00010007512 #16 DOCK8 (ENSVURG00010007566) #17 KANK1 (ENSVURG00010007648) #18 DMRT1 (ENSVURG00010007673) #19 DMRT3 (ENSVURG00010007680) #20 ENSVURG00010007684 DMRT2 (ENSVURG00010007688) #21 SMARCA2 (ENSVURG00010007727) #22 VLDLR (ENSVURG00010008117) #24 ENSVURG00010008151 #25 ENSVURG00010008158 ENSVURG00010008167 SVEP1 (ENSVURG00010008182) MUSK (ENSVURG00010008274) LPAR1 (ENSVURG00010008572) SMC2 (ENSVURG00010008589) ENSVURG00010008619 ENSVURG00010008671 MYH11 (ENSVURG00010008696) NDE1 (ENSVURG00010008816) MARF1 (ENSVURG00010008830) BMERB1 (ENSVURG00010008875) ENSVURG00010008879 Wallaby MODERN SPECIES 352 SMARCA2 (ENSMEUG00000009812) #22 Tasmanian devil MODERN SPECIES ENSSHAG00000001209 ENSSHAG00000001019 ENSSHAG00000006135 ENSSHAG00000023898 ENSSHAG00000001482 ENSSHAG00000031308 NFIL3 (ENSSHAG00000030770) ENSSHAG00000025064 ENSSHAG00000001579 ENSSHAG00000029291 #16 ENSSHAG00000000407 #17 ENSSHAG00000005856 #18 DMRT1 (ENSSHAG00000006920) #19 DMRT3 (ENSSHAG00000008620) #20 DMRT2 (ENSSHAG00000009329) #21 SMARCA2 (ENSSHAG00000007884) #22 VLDLR (ENSSHAG00000001123) #24 ENSSHAG00000025886 #25 ENSSHAG00000006739 ENSSHAG00000023521 SVEP1 (ENSSHAG00000027165) MUSK (ENSSHAG00000001254) ENSSHAG00000005546 ENSSHAG00000004265 ENSSHAG00000005536 MYH11 (ENSSHAG00000007381) NDE1 (ENSSHAG00000008432) MARF1 (ENSSHAG00000008782) BMERB1 (ENSSHAG00000029806) ENSSHAG00000029566 ENSSHAG00000010677 Opossum MODERN SPECIES 5 PIP5K1B (ENSMODG00000003063) TMEM252 (ENSMODG00000003092) #13 PGM5 (ENSMODG00000003131) #14 ENSMODG00000024854 ENSMODG00000044468 #15 ENSMODG00000039961 ENSMODG00000044962 #17 ENSMODG00000045417 #17 ENSMODG00000003306 #17 KANK1 (ENSMODG00000003387) #18 DMRT1 (ENSMODG00000003401) #19 DMRT3 (ENSMODG00000003407) #20 DMRT2 (ENSMODG00000003430) #21 ENSMODG00000024673 ENSMODG00000024839 SMARCA2 (ENSMODG00000003578) #22 ENSMODG00000041801 VLDLR (ENSMODG00000003620) #24 KCNV2 (ENSMODG00000003631) #25 ENSMODG00000049910 ENSMODG00000003635 SVEP1 (ENSMODG00000003939) MUSK (ENSMODG00000003983) LPAR1 (ENSMODG00000003999) ENSMODG00000048116 SMC2 (ENSMODG00000004036) ABCC1 (ENSMODG00000004194) ENSMODG00000040466 ENSMODG00000024730 ENSMODG00000004204 MYH11 (ENSMODG00000004360) Platypus MODERN SPECIES 88 PTAR1 (ENSOANG00000005028) #7 APBA1 (ENSOANG00000002093) #8 ENTREP1 (ENSOANG00000003151) #9 TJP2 (ENSOANG00000013266) #10 PIP5K1B (ENSOANG00000013264) ENSOANG00000028420 #13 PGM5 (ENSOANG00000012517) #14 ENSOANG00000040009 #15 ENSOANG00000012519 #16 DOCK8 (ENSOANG00000044143) #17 KANK1 (ENSOANG00000008293) #18 DMRT1 (ENSOANG00000036834) #19 DMRT3 (ENSOANG00000008295) #20 DMRT2 (ENSOANG00000008296) #21 ENSOANG00000008297 SMARCA2 (ENSOANG00000008299) #22 VLDLR (ENSOANG00000014993) #24 KCNV2 (ENSOANG00000014994) #25 PUM3 (ENSOANG00000014995) #26 ENSOANG00000043031 RFX3 (ENSOANG00000014996) #27 GLIS3 (ENSOANG00000014997) #28 SLC1A1 (ENSOANG00000013192) #29 ENSOANG00000039420 #31 ENSOANG00000036739 #30 CDC37L1 (ENSOANG00000001511) #32 ENSOANG00000049559 AK3 (ENSOANG00000001505) #33 RCL1 (ENSOANG00000013193) #34 JAK2 (ENSOANG00000010092) #35 ENSOANG00000031851 #37 Sauria ANCESTRAL SPECIES 5 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Lepidosauria ANCESTRAL SPECIES 1 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Episquamata ANCESTRAL SPECIES 6 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Toxicofera ANCESTRAL SPECIES 6 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Elapidae ANCESTRAL SPECIES 7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00390000000375 ENSGT00940000161373 Elapidae_a ANCESTRAL SPECIES 101 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00390000000375 ENSGT00940000161373 ENSGT00390000002955 Acanthophiinae ANCESTRAL SPECIES 9 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000164995 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876.m #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00390000000375 ENSGT00940000161373 ENSGT00390000002955 Mainland tiger snake MODERN SPECIES 1 PTAR1 (ENSNSUG00000017852) #7 APBA1 (ENSNSUG00000017853) #8 ENTREP1 (ENSNSUG00000017854) #9 ENSNSUG00000017855 FXN (ENSNSUG00000018034) #11 PIP5K1B (ENSNSUG00000018035) TMEM252 (ENSNSUG00000018038) #13 PGM5 (ENSNSUG00000018044) #14 ENSNSUG00000018047 ENSNSUG00000018048 DOCK8 (ENSNSUG00000018049) #17 KANK1 (ENSNSUG00000018050) #18 DMRT1 (ENSNSUG00000018051) #19 DMRT3 (ENSNSUG00000018056) #20 DMRT2 (ENSNSUG00000018057) #21 SMARCA2 (ENSNSUG00000018108) #22 VLDLR (ENSNSUG00000019901) #24 KCNV2 (ENSNSUG00000019916) #25 PUM3 (ENSNSUG00000019917) #26 ENSNSUG00000019918 RFX3 (ENSNSUG00000019919) #27 GLIS3 (ENSNSUG00000019925) #28 SLC1A1 (ENSNSUG00000019926) #29 SPATA6L (ENSNSUG00000019928) #30 CDC37L1 (ENSNSUG00000019929) #32 AK3 (ENSNSUG00000019930) #33 ENSNSUG00000019931 #34 ENSNSUG00000019932 #34 JAK2 (ENSNSUG00000019934) #35 PLGRKT (ENSNSUG00000019935) PDCD1LG2 (ENSNSUG00000019936) Eastern brown snake MODERN SPECIES 23 PTAR1 (ENSPTXG00000019202) #7 APBA1 (ENSPTXG00000019201) #8 ENTREP1 (ENSPTXG00000019200) #9 ENSPTXG00000018866 FXN (ENSPTXG00000018865) #11 PIP5K1B (ENSPTXG00000018864) TMEM252 (ENSPTXG00000018863) #13 PGM5 (ENSPTXG00000018862) #14 ENSPTXG00000018861 ENSPTXG00000018860 #16 DOCK8 (ENSPTXG00000018810) #17 KANK1 (ENSPTXG00000018808) #18 DMRT1 (ENSPTXG00000018807) #19 DMRT3 (ENSPTXG00000018806) #20 DMRT2 (ENSPTXG00000018805) #21 SMARCA2 (ENSPTXG00000018801) #22 VLDLR (ENSPTXG00000018796) #24 KCNV2 (ENSPTXG00000018795) #25 PUM3 (ENSPTXG00000018794) #26 ENSPTXG00000018793 RFX3 (ENSPTXG00000018767) #27 GLIS3 (ENSPTXG00000018766) #28 SLC1A1 (ENSPTXG00000018764) #29 CDC37L1 (ENSPTXG00000018763) #32 AK3 (ENSPTXG00000018762) #33 RCL1 (ENSPTXG00000018760) #34 JAK2 (ENSPTXG00000018752) #35 PLGRKT (ENSPTXG00000018751) PDCD1LG2 (ENSPTXG00000018750) RIC1 (ENSPTXG00000018749) ERMP1 (ENSPTXG00000018748) Blue-lipped sea krait MODERN SPECIES 2851 SMARCA2 (ENSLLTG00000001135) #22 Indian cobra MODERN SPECIES 1 ENTREP1 (ENSNNAG00000017925) #9 TJP2 (ENSNNAG00000017694) #10 FXN (ENSNNAG00000017581) #11 PIP5K1B (ENSNNAG00000017571) TMEM252 (ENSNNAG00000017566) #13 PGM5 (ENSNNAG00000017535) #14 ENSNNAG00000017526 ENSNNAG00000017514 #16 ENSNNAG00000017496 #17 ENSNNAG00000017479 #17 ENSNNAG00000017470 #17 KANK1 (ENSNNAG00000017462) #18 DMRT1 (ENSNNAG00000017439) #19 DMRT3 (ENSNNAG00000017425) #20 DMRT2 (ENSNNAG00000017421) #21 SMARCA2 (ENSNNAG00000016662) #22 VLDLR (ENSNNAG00000016101) #24 KCNV2 (ENSNNAG00000016029) #25 ENSNNAG00000015978 #26 ENSNNAG00000015953 #26 ENSNNAG00000015896 RFX3 (ENSNNAG00000015581) #27 GLIS3 (ENSNNAG00000015518) #28 ENSNNAG00000015513 SLC1A1 (ENSNNAG00000015451) #29 CDC37L1 (ENSNNAG00000015380) #32 AK3 (ENSNNAG00000015359) #33 RCL1 (ENSNNAG00000015339) #34 JAK2 (ENSNNAG00000015311) #35 PLGRKT (ENSNNAG00000015298) PDCD1LG2 (ENSNNAG00000015251) Lizard MODERN SPECIES 1 APBA1 (ENSACAG00000001040) #8 ENTREP1 (ENSACAG00000001191) #9 ENSACAG00000001252 FXN (ENSACAG00000043698) #11 PIP5K1B (ENSACAG00000001281) TMEM252 (ENSACAG00000029180) #13 PGM5 (ENSACAG00000001410) #14 ENSACAG00000008130 ENSACAG00000001658 #16 DOCK8 (ENSACAG00000001924) #17 ENSACAG00000036574 KANK1 (ENSACAG00000002270) #18 DMRT1 (ENSACAG00000002356) #19 DMRT3 (ENSACAG00000002401) #20 DMRT2 (ENSACAG00000002411) #21 SMARCA2 (ENSACAG00000002423) #22 VLDLR (ENSACAG00000003015) #24 KCNV2 (ENSACAG00000003138) #25 PUM3 (ENSACAG00000003174) #26 ENSACAG00000003227 ENSACAG00000035469 RFX3 (ENSACAG00000003262) #27 GLIS3 (ENSACAG00000003374) #28 ENSACAG00000036408 SLC1A1 (ENSACAG00000003433) #29 ENSACAG00000043625 SPATA6L (ENSACAG00000029209) #30 CDC37L1 (ENSACAG00000003578) #32 AK3 (ENSACAG00000003605) #33 RCL1 (ENSACAG00000003640) #34 JAK2 (ENSACAG00000003673) #35 Laterata ANCESTRAL SPECIES 8 ENSGT00390000017892 #7 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000161645.a.e ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a.i #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 Argentine black and white tegu MODERN SPECIES 25 ENTREP1 (ENSSMRG00000016063) #9 TJP2 (ENSSMRG00000016062) #10 FXN (ENSSMRG00000016061) #11 PIP5K1B (ENSSMRG00000016060) TMEM252 (ENSSMRG00000016059) #13 ENSSMRG00000016058 PGM5 (ENSSMRG00000016057) #14 ENSSMRG00000016056 ENSSMRG00000016054 #16 DOCK8 (ENSSMRG00000012483) #17 KANK1 (ENSSMRG00000012463) #18 DMRT1 (ENSSMRG00000012418) #19 DMRT3 (ENSSMRG00000012413) #20 DMRT2 (ENSSMRG00000012412) #21 ENSSMRG00000012401 SMARCA2 (ENSSMRG00000012396) #22 VLDLR (ENSSMRG00000012387) #24 KCNV2 (ENSSMRG00000012381) #25 PUM3 (ENSSMRG00000012380) #26 ENSSMRG00000012379 RFX3 (ENSSMRG00000012376) #27 GLIS3 (ENSSMRG00000012362) #28 ENSSMRG00000012349 KIAA2026 (ENSSMRG00000012326) MLANA (ENSSMRG00000012325) ERMP1 (ENSSMRG00000012324) RIC1 (ENSSMRG00000012320) PDCD1LG2 (ENSSMRG00000012319) PLGRKT (ENSSMRG00000012308) ENSSMRG00000012307 #37 JAK2 (ENSSMRG00000012306) #35 Common wall lizard MODERN SPECIES 8 HACD4 (ENSPMRG00000021384) ENSPMRG00000021394 ENSPMRG00000021401 ENSPMRG00000021420 ENSPMRG00000021428 ENSPMRG00000021432 ENSPMRG00000021439 ENSPMRG00000021447 MTAP (ENSPMRG00000021457) CDKN2A (ENSPMRG00000021465) CDKN2B (ENSPMRG00000021467) KANK1 (ENSPMRG00000021475) #18 DMRT1 (ENSPMRG00000021487) #19 DMRT3 (ENSPMRG00000021491) #20 DMRT2 (ENSPMRG00000021499) #21 SMARCA2 (ENSPMRG00000021519) #22 ENSPMRG00000021578 VLDLR (ENSPMRG00000021598) #24 ENSPMRG00000021621 KCNV2 (ENSPMRG00000021625) #25 PUM3 (ENSPMRG00000021630) #26 ENSPMRG00000021639 RFX3 (ENSPMRG00000021654) #27 GLIS3 (ENSPMRG00000021747) #28 ENSPMRG00000021781 TMEM39A (ENSPMRG00000021818) ALG5 (ENSPMRG00000021829) EXOSC8 (ENSPMRG00000021840) SUPT20H (ENSPMRG00000021871) POSTN (ENSPMRG00000021938) ENSPMRG00000022112 tuatara MODERN SPECIES 1196 SMARCA2 (ENSSPUG00000001629) #22 VLDLR (ENSSPUG00000001691) #24 KCNV2 (ENSSPUG00000001702) #25 PUM3 (ENSSPUG00000001707) #26 ENSSPUG00000001722 RFX3 (ENSSPUG00000001791) #27 ENSSPUG00000001944 ENSSPUG00000001966 #28 ENSSPUG00000001985 #28 Archelosauria ANCESTRAL SPECIES 7 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00910000144227.t ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Cryptodira ANCESTRAL SPECIES 48 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00950000185504 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Testudinoidea ANCESTRAL SPECIES 7 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00950000185504 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Emydidae ANCESTRAL SPECIES 20 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00950000185504 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161430 Three-toed box turtle MODERN SPECIES 50 APBA1 (ENSTMTG00000004858) #8 ENTREP1 (ENSTMTG00000005867) #9 TJP2 (ENSTMTG00000005907) #10 FXN (ENSTMTG00000005998) #11 PIP5K1B (ENSTMTG00000006026) TMEM252 (ENSTMTG00000006221) #13 PGM5 (ENSTMTG00000006248) #14 ENSTMTG00000006284 #16 DOCK8 (ENSTMTG00000006799) #17 ENSTMTG00000015924 KANK1 (ENSTMTG00000015933) #18 ENSTMTG00000015959 DMRT1 (ENSTMTG00000015977) #19 DMRT3 (ENSTMTG00000015991) #20 DMRT2 (ENSTMTG00000016004) #21 SMARCA2 (ENSTMTG00000016037) #22 VLDLR (ENSTMTG00000016110) #24 KCNV2 (ENSTMTG00000016251) #25 PUM3 (ENSTMTG00000016264) #26 ENSTMTG00000016298 RFX3 (ENSTMTG00000016347) #27 GLIS3 (ENSTMTG00000016537) #28 SLC1A1 (ENSTMTG00000016551) #29 SPATA6L (ENSTMTG00000016584) #30 CDC37L1 (ENSTMTG00000016607) #32 AK3 (ENSTMTG00000016623) #33 RCL1 (ENSTMTG00000016634) #34 JAK2 (ENSTMTG00000016660) #35 ENSTMTG00000016706 #37 PLGRKT (ENSTMTG00000016710) CD274 (ENSTMTG00000016745) painted turtle MODERN SPECIES 15 ENSCPBG00000025309 APBA1 (ENSCPBG00000025317) #8 ENTREP1 (ENSCPBG00000025326) #9 TJP2 (ENSCPBG00000025332) #10 FXN (ENSCPBG00000025340) #11 PIP5K1B (ENSCPBG00000025343) TMEM252 (ENSCPBG00000025354) #13 PGM5 (ENSCPBG00000025365) #14 ENSCPBG00000025429 #16 DOCK8 (ENSCPBG00000025439) #17 ENSCPBG00000025452 KANK1 (ENSCPBG00000025457) #18 DMRT1 (ENSCPBG00000025458) #19 DMRT3 (ENSCPBG00000025461) #20 DMRT2 (ENSCPBG00000025462) #21 SMARCA2 (ENSCPBG00000025463) #22 VLDLR (ENSCPBG00000025468) #24 KCNV2 (ENSCPBG00000025469) #25 PUM3 (ENSCPBG00000025470) #26 ENSCPBG00000025471 RFX3 (ENSCPBG00000025473) #27 GLIS3 (ENSCPBG00000025474) #28 SLC1A1 (ENSCPBG00000025475) #29 SPATA6L (ENSCPBG00000025478) #30 CDC37L1 (ENSCPBG00000025479) #32 AK3 (ENSCPBG00000025480) #33 RCL1 (ENSCPBG00000025481) #34 JAK2 (ENSCPBG00000025483) #35 ENSCPBG00000025484 #37 PLGRKT (ENSCPBG00000025485) CD274 (ENSCPBG00000025486) Testudinidae ANCESTRAL SPECIES 15 ENSGT00940000156820.a.a #8 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000157140.b.b ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a.ib #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757.c #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00950000186013 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 Goode s thornscrub tortoise MODERN SPECIES 20 ENSGEVG00005014485 PTAR1 (ENSGEVG00005014516) #7 APBA1 (ENSGEVG00005014541) #8 ENTREP1 (ENSGEVG00005014644) #9 TJP2 (ENSGEVG00005014736) #10 FXN (ENSGEVG00005014780) #11 PIP5K1B (ENSGEVG00005014815) TMEM252 (ENSGEVG00005014919) #13 PGM5 (ENSGEVG00005014982) #14 ENSGEVG00005015265 #16 DOCK8 (ENSGEVG00005015343) #17 KANK1 (ENSGEVG00005015437) #18 DMRT1 (ENSGEVG00005015585) #19 DMRT3 (ENSGEVG00005015865) #20 DMRT2 (ENSGEVG00005015890) #21 SMARCA2 (ENSGEVG00005015950) #22 KCNV2 (ENSGEVG00005016696) #25 ENSGEVG00005016771 #26 ENSGEVG00005017017 RFX3 (ENSGEVG00005017166) #27 GLIS3 (ENSGEVG00005017217) #28 ENSGEVG00005017260 SLC1A1 (ENSGEVG00005017274) #29 SPATA6L (ENSGEVG00005017368) #30 CDC37L1 (ENSGEVG00005017405) #32 AK3 (ENSGEVG00005017423) #33 RCL1 (ENSGEVG00005017434) #34 JAK2 (ENSGEVG00005017459) #35 ENSGEVG00005017487 #37 PLGRKT (ENSGEVG00005017508) CD274 (ENSGEVG00005017525) Abingdon island giant tortoise MODERN SPECIES 2200 FXN (ENSCABG00000022464) #11 PIP5K1B (ENSCABG00000022463) TMEM252 (ENSCABG00000022462) #13 PGM5 (ENSCABG00000022451) #14 ENSCABG00000022444 ENSCABG00000022441 #16 ENSCABG00000022438 ENSCABG00000022437 #17 ENSCABG00000022434 #17 ENSCABG00000022433 #18 ENSCABG00000022432 #18 DMRT1 (ENSCABG00000022413) #19 DMRT3 (ENSCABG00000022401) #20 DMRT2 (ENSCABG00000022399) #21 ENSCABG00000022392 SMARCA2 (ENSCABG00000019732) #22 VLDLR (ENSCABG00000019415) #24 KCNV2 (ENSCABG00000019411) #25 ENSCABG00000019410 #26 ENSCABG00000019407 RFX3 (ENSCABG00000019365) #27 GLIS3 (ENSCABG00000019359) #28 ENSCABG00000019358 SLC1A1 (ENSCABG00000019357) #29 ENSCABG00000019356 Chinese turtle MODERN SPECIES 1589 SMARCA2 (ENSPSIG00000006284) #22 VLDLR (ENSPSIG00000009633) #24 KCNV2 (ENSPSIG00000016104) #25 PUM3 (ENSPSIG00000016272) #26 ENSPSIG00000017939 Archosauria ANCESTRAL SPECIES 31 ENSGT00530000063335.B.a.b #9 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00910000144227.t ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161430 Australian saltwater crocodile MODERN SPECIES 67 PTAR1 (ENSCPRG00005005647) #7 ENSCPRG00005005637 APBA1 (ENSCPRG00005005588) #8 ENTREP1 (ENSCPRG00005005585) #9 ENSCPRG00005005571 FXN (ENSCPRG00005005552) #11 PIP5K1B (ENSCPRG00005005542) TMEM252 (ENSCPRG00005005520) #13 PGM5 (ENSCPRG00005005087) #14 ENSCPRG00005005028 #16 DOCK8 (ENSCPRG00005004968) #17 KANK1 (ENSCPRG00005004939) #18 DMRT1 (ENSCPRG00005004893) #19 DMRT3 (ENSCPRG00005004879) #20 DMRT2 (ENSCPRG00005004868) #21 SMARCA2 (ENSCPRG00005004803) #22 ENSCPRG00005004774 VLDLR (ENSCPRG00005004758) #24 KCNV2 (ENSCPRG00005004751) #25 PUM3 (ENSCPRG00005004547) #26 ENSCPRG00005004519 RFX3 (ENSCPRG00005004493) #27 GLIS3 (ENSCPRG00005004466) #28 SLC1A1 (ENSCPRG00005004424) #29 SPATA6L (ENSCPRG00005004407) #30 CDC37L1 (ENSCPRG00005004396) #32 AK3 (ENSCPRG00005004395) #33 RCL1 (ENSCPRG00005004387) #34 JAK2 (ENSCPRG00005004373) #35 ENSCPRG00005004371 #37 PLGRKT (ENSCPRG00005004366) Aves ANCESTRAL SPECIES 45 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161430 African ostrich DUPLICATION African ostrich DUPLICATION African ostrich MODERN SPECIES 431 DMRT3 (ENSSCUG00000009435) #20 DMRT2 (ENSSCUG00000009438) #21 ENSSCUG00000009444 #22 African ostrich MODERN SPECIES 923 ENSSCUG00000016608 #22 VLDLR (ENSSCUG00000016871) #24 PUM3 (ENSSCUG00000016947) #26 ENSSCUG00000016959 RFX3 (ENSSCUG00000016961) #27 GLIS3 (ENSSCUG00000016965) #28 African ostrich MODERN SPECIES 622 ENSSCUG00000008383 #22 Neognathae ANCESTRAL SPECIES 12 ENSGT00940000155389.c ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161430 ENSGT00940000161373 Neognathae_b ANCESTRAL SPECIES 5 ENSGT00940000155389.d.a ENSGT00940000155389.c ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161430 ENSGT00940000161373 Passeriformes ANCESTRAL SPECIES 7 ENSGT00940000157105.n.b ENSGT00940000155389.d.a ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000162777.a.a.a.a ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161430 ENSGT00940000161373 Great tit MODERN SPECIES 642 ENSPMJG00000016175 TMEM174 (ENSPMJG00000016176) TMEM171 (ENSPMJG00000016177) FCHO2 (ENSPMJG00000016179) TNPO1 (ENSPMJG00000016180) ZNF366 (ENSPMJG00000016182) MRPS27 (ENSPMJG00000016185) MAP1B (ENSPMJG00000016186) PGM5 (ENSPMJG00000016187) #14 ENSPMJG00000016188 #13 ENSPMJG00000016189 #16 DOCK8 (ENSPMJG00000016190) #17 KANK1 (ENSPMJG00000016191) #18 DMRT1 (ENSPMJG00000016192) #19 DMRT2 (ENSPMJG00000016193) #21 SMARCA2 (ENSPMJG00000016196) #22 VLDLR (ENSPMJG00000016197) #24 KCNV2 (ENSPMJG00000016198) #25 PUM3 (ENSPMJG00000016199) #26 ENSPMJG00000016200 RFX3 (ENSPMJG00000016201) #27 GLIS3 (ENSPMJG00000016202) #28 SLC1A1 (ENSPMJG00000016203) #29 ENSPMJG00000016204 ENSPMJG00000016205 CDC37L1 (ENSPMJG00000016206) #32 AK3 (ENSPMJG00000016207) #33 RCL1 (ENSPMJG00000016208) #34 JAK2 (ENSPMJG00000016210) #35 ENSPMJG00000016211 #37 PLGRKT (ENSPMJG00000016212) Passeriformes_d ANCESTRAL SPECIES 6 ENSGT00940000157105.n.b ENSGT00940000155389.d.a ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000162777.a.a.a.a ENSGT01050000244879.a.a.b.e #27 ENSGT01100000265023 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a.k #34 ENSGT00940000155640 #35 ENSGT00940000169000 ENSGT00390000000375 ENSGT00940000161430 Passeriformes_g ANCESTRAL SPECIES 7 ENSGT00940000157105.n.b ENSGT00940000155389.d.a ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000162777.a.a.a.a ENSGT01050000244879.a.a.b.e #27 ENSGT01100000265023 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00940000155319.g.b.a.b ENSGT00960000189358 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a.k #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 Medium ground finch MODERN SPECIES 165 ZNF366 (ENSGFOG00000011222) PTCD2 (ENSGFOG00000011214) MRPS27 (ENSGFOG00000011203) ENSGFOG00000011197 ENSGFOG00000011192 #13 PGM5 (ENSGFOG00000011183) #14 ENSGFOG00000011177 #16 ENSGFOG00000011169 #17 ENSGFOG00000011163 #17 ENSGFOG00000011159 #17 KANK1 (ENSGFOG00000011149) #18 DMRT2 (ENSGFOG00000011147) #21 SMARCA2 (ENSGFOG00000011122) #22 VLDLR (ENSGFOG00000009041) #24 KCNV2 (ENSGFOG00000008864) #25 PUM3 (ENSGFOG00000008804) #26 ENSGFOG00000008784 ENSGFOG00000008755 #27 Passeroidea ANCESTRAL SPECIES 23 ENSGT00940000157105.n.b ENSGT00940000155389.d.a ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00960000189645 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000162777.a.a.a.a ENSGT01050000244879.a.a.b.e #27 ENSGT01100000265023 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00940000155319.g.b.a.b ENSGT00960000189358 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a.k #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 Zebra finch MODERN SPECIES 104 TMEM171 (ENSTGUG00000005840) FCHO2 (ENSTGUG00000005780) TNPO1 (ENSTGUG00000005729) ZNF366 (ENSTGUG00000005717) PTCD2 (ENSTGUG00000005705) MRPS27 (ENSTGUG00000005691) MAP1B (ENSTGUG00000005669) TMEM252 (ENSTGUG00000005666) #13 PGM5 (ENSTGUG00000005644) #14 ENSTGUG00000005631 #16 DOCK8 (ENSTGUG00000005550) #17 KANK1 (ENSTGUG00000005531) #18 DMRT1 (ENSTGUG00000005524) #19 DMRT3 (ENSTGUG00000005521) #20 DMRT2 (ENSTGUG00000005515) #21 SMARCA2 (ENSTGUG00000005460) #22 VLDLR (ENSTGUG00000005386) #24 ENSTGUG00000005381 KCNV2 (ENSTGUG00000018853) #25 PUM3 (ENSTGUG00000005339) #26 ENSTGUG00000005327 RFX3 (ENSTGUG00000005287) #27 ENSTGUG00000022949 ENSTGUG00000024012 GLIS3 (ENSTGUG00000005266) #28 SLC1A1 (ENSTGUG00000005214) #29 ENSTGUG00000005203 ENSTGUG00000019342 ENSTGUG00000029693 CDC37L1 (ENSTGUG00000005189) #32 AK3 (ENSTGUG00000005155) #33 Common canary MODERN SPECIES 25 FCHO2 (ENSSCAG00000004714) ENSSCAG00000004350 ZNF366 (ENSSCAG00000004281) PTCD2 (ENSSCAG00000004277) MRPS27 (ENSSCAG00000004269) ENSSCAG00000004262 TMEM252 (ENSSCAG00000004252) #13 PGM5 (ENSSCAG00000004248) #14 ENSSCAG00000004163 #16 DOCK8 (ENSSCAG00000003379) #17 KANK1 (ENSSCAG00000003206) #18 ENSSCAG00000003201 DMRT1 (ENSSCAG00000003198) #19 DMRT3 (ENSSCAG00000003195) #20 DMRT2 (ENSSCAG00000003191) #21 SMARCA2 (ENSSCAG00000003181) #22 VLDLR (ENSSCAG00000003171) #24 KCNV2 (ENSSCAG00000003167) #25 PUM3 (ENSSCAG00000003162) #26 ENSSCAG00000003143 ENSSCAG00000003133 #27 ENSSCAG00000003109 PTPRD (ENSSCAG00000002170) TYRP1 (ENSSCAG00000001949) MPDZ (ENSSCAG00000001857) NFIB (ENSSCAG00000001799) ZDHHC21 (ENSSCAG00000001780) CER1 (ENSSCAG00000001779) FREM1 (ENSSCAG00000001715) TTC39B (ENSSCAG00000001680) SNAPC3 (ENSSCAG00000001672) Flycatcher MODERN SPECIES 561 TNPO1 (ENSFALG00000010292) ZNF366 (ENSFALG00000010297) PTCD2 (ENSFALG00000010299) MRPS27 (ENSFALG00000010306) ENSFALG00000010312 ENSFALG00000025792 ENSFALG00000023216 #13 ENSFALG00000010321 #14 ENSFALG00000010329 #16 DOCK8 (ENSFALG00000010346) #17 KANK1 (ENSFALG00000010385) #18 DMRT1 (ENSFALG00000010388) #19 DMRT3 (ENSFALG00000010391) #20 DMRT2 (ENSFALG00000010393) #21 ENSFALG00000023612 SMARCA2 (ENSFALG00000010416) #22 VLDLR (ENSFALG00000010477) #24 KCNV2 (ENSFALG00000010508) #25 PUM3 (ENSFALG00000010509) #26 ENSFALG00000010512 RFX3 (ENSFALG00000010515) #27 ENSFALG00000027595 GLIS3 (ENSFALG00000010519) #28 SLC1A1 (ENSFALG00000010522) #29 ENSFALG00000014597 ENSFALG00000010526 ENSFALG00000010531 CDC37L1 (ENSFALG00000023426) #32 AK3 (ENSFALG00000010543) #33 ENSFALG00000025956 ENSFALG00000010553 #34 Neognathae_c ANCESTRAL SPECIES 2 ENSGT00940000157105.n.b ENSGT00940000155389.d.a ENSGT00940000155389.c ENSGT00940000155498.h ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161373 ENSGT00390000002955 Kakapo MODERN SPECIES 19 ENSSHBG00005020632 ENSSHBG00005020631 PTCD2 (ENSSHBG00005020628) MRPS27 (ENSSHBG00005020624) ENSSHBG00005020612 ENSSHBG00005020611 TMEM252 (ENSSHBG00005020607) #13 PGM5 (ENSSHBG00005020602) #14 ENSSHBG00005020597 #16 DOCK8 (ENSSHBG00005020306) #17 ENSSHBG00005020200 #18 ENSSHBG00005020196 #18 DMRT1 (ENSSHBG00005020193) #19 DMRT3 (ENSSHBG00005020188) #20 DMRT2 (ENSSHBG00005020185) #21 SMARCA2 (ENSSHBG00005017989) #22 VLDLR (ENSSHBG00005017636) #24 KCNV2 (ENSSHBG00005017626) #25 PUM3 (ENSSHBG00005017598) #26 ENSSHBG00005017578 ENSSHBG00005017571 #27 GLIS3 (ENSSHBG00005017563) #28 AK3 (ENSSHBG00005017556) #33 CDC37L1 (ENSSHBG00005017553) #32 SLC1A1 (ENSSHBG00005017548) #29 RCL1 (ENSSHBG00005017541) #34 JAK2 (ENSSHBG00005017499) #35 ENSSHBG00005017481 #37 PDCD1LG2 (ENSSHBG00005017476) RIC1 (ENSSHBG00005017400) ERMP1 (ENSSHBG00005017385) Golden eagle MODERN SPECIES 91 TNPO1 (ENSACCG00020016800) ZNF366 (ENSACCG00020016792) PTCD2 (ENSACCG00020016781) MRPS27 (ENSACCG00020016774) ENSACCG00020016767 ENSACCG00020016763 TMEM252 (ENSACCG00020016759) #13 PGM5 (ENSACCG00020016754) #14 ENSACCG00020016750 #16 DOCK8 (ENSACCG00020016450) #17 ENSACCG00020014971 #18 ENSACCG00020014951 #18 DMRT1 (ENSACCG00020014930) #19 DMRT3 (ENSACCG00020014910) #20 DMRT2 (ENSACCG00020014901) #21 SMARCA2 (ENSACCG00020014838) #22 VLDLR (ENSACCG00020014749) #24 KCNV2 (ENSACCG00020014716) #25 PUM3 (ENSACCG00020014700) #26 ENSACCG00020014683 RFX3 (ENSACCG00020014653) #27 GLIS3 (ENSACCG00020014613) #28 SLC1A1 (ENSACCG00020014593) #29 CDC37L1 (ENSACCG00020014575) #32 AK3 (ENSACCG00020014563) #33 RCL1 (ENSACCG00020014540) #34 JAK2 (ENSACCG00020014493) #35 ENSACCG00020014475 #37 PLGRKT (ENSACCG00020014461) ENSACCG00020014444 PDCD1LG2 (ENSACCG00020014424) Galloanserae ANCESTRAL SPECIES 11 ENSGT00940000155389.d ENSGT00940000155389.c ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154396.a ENSGT00390000000375 ENSGT00940000161373 ENSGT00390000002955 Phasianidae ANCESTRAL SPECIES 5 ENSGT00940000155389.d ENSGT00940000155389.c ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876.e.a #17 ENSGT00940000154886.a.a.db.a #18 ENSGT00940000154886.a.a.db.b #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154396.a ENSGT00940000161373 ENSGT00390000002955 ENSGT00530000063839 ENSGT00940000164450 Japanese quail MODERN SPECIES 699 ENSCJPG00005002058 ENSCJPG00005002062 ENSCJPG00005002070 ZNF366 (ENSCJPG00005002079) PTCD2 (ENSCJPG00005002087) MRPS27 (ENSCJPG00005002094) MAP1B (ENSCJPG00005002102) TMEM252 (ENSCJPG00005002105) #13 PGM5 (ENSCJPG00005002107) #14 ENSCJPG00005002115 #16 DOCK8 (ENSCJPG00005002158) #17 KANK1 (ENSCJPG00005002171) #18 DMRT1 (ENSCJPG00005002189) #19 DMRT3 (ENSCJPG00005002191) #20 DMRT2 (ENSCJPG00005002194) #21 SMARCA2 (ENSCJPG00005002199) #22 VLDLR (ENSCJPG00005002212) #24 KCNV2 (ENSCJPG00005003166) #25 PUM3 (ENSCJPG00005003170) #26 RFX3 (ENSCJPG00005003180) #27 GLIS3 (ENSCJPG00005003188) #28 SLC1A1 (ENSCJPG00005003195) #29 CDC37L1 (ENSCJPG00005003200) #32 AK3 (ENSCJPG00005003204) #33 RCL1 (ENSCJPG00005003205) #34 JAK2 (ENSCJPG00005003214) #35 ENSCJPG00005003229 ENSCJPG00005003230 PDCD1LG2 (ENSCJPG00005003231) RIC1 (ENSCJPG00005003232) ERMP1 (ENSCJPG00005003237) Phasianidae_b ANCESTRAL SPECIES 5 ENSGT00390000004161 ENSGT00390000017024 ENSGT00940000157105 ENSGT00940000155389.d ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00940000155876.e.a #17 ENSGT00940000154886.a.a.db.a #18 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154396.a ENSGT00940000161373 ENSGT00390000002955 ENSGT00530000063839 ENSGT00940000164450 Chicken MODERN SPECIES 131 ENSGALG00010012110 FCHO2 (ENSGALG00010013297) TNPO1 (ENSGALG00010010186) ZNF366 (ENSGALG00010012008) PTCD2 (ENSGALG00010011572) MRPS27 (ENSGALG00010011649) MAP1B (ENSGALG00010011681) TMEM252 (ENSGALG00010011444) #13 PGM5 (ENSGALG00010011887) #14 CBWD1 (ENSGALG00010011287) #16 DOCK8 (ENSGALG00010011311) #17 KANK1 (ENSGALG00010011351) #18 DMRT1 (ENSGALG00010011437) #20 ENSGALG00010011462 DMRT2 (ENSGALG00010011482) #21 SMARCA2 (ENSGALG00010011808) #22 VLDLR (ENSGALG00010011837) #24 KCNV2 (ENSGALG00010010198) #25 PUM3 (ENSGALG00010011384) #26 RFX3 (ENSGALG00010011873) #27 GLIS3 (ENSGALG00010010147) #28 SLC1A1 (ENSGALG00010011937) #29 CDC37L1 (ENSGALG00010011133) #32 AK3 (ENSGALG00010011143) #33 RCL1 (ENSGALG00010011222) #34 JAK2 (ENSGALG00010012833) #35 RLN3 (ENSGALG00010012847) CD274 (ENSGALG00010012871) PDCD1LG2 (ENSGALG00010013312) RIC1 (ENSGALG00010012889) ERMP1 (ENSGALG00010012904) Turkey MODERN SPECIES 1299 ENSMGAG00000005094 #18 ENSMGAG00000022563 #17 ENSMGAG00000005034 #17 ENSMGAG00000022224 #17 ENSMGAG00000005135 ENSMGAG00000018973 #16 ENSMGAG00000017142 #14 ENSMGAG00000020678 #13 ENSMGAG00000019468 #18 ENSMGAG00000005156 #19 ENSMGAG00000021756 ENSMGAG00000016103 #21 ENSMGAG00000002255 #26 KCNV2 (ENSMGAG00000001039) #25 VLDLR (ENSMGAG00000003673) #24 ENSMGAG00000016991 #22 ENSMGAG00000019982 SLC1A1 (ENSMGAG00000005250) #29 CDC37L1 (ENSMGAG00000005316) #32 AK3 (ENSMGAG00000005306) #33 ENSMGAG00000021960 #34 ENSMGAG00000002245 #34 JAK2 (ENSMGAG00000005291) #35 ENSMGAG00000016647 ENSMGAG00000005340 PDCD1LG2 (ENSMGAG00000020864) RIC1 (ENSMGAG00000005427) ERMP1 (ENSMGAG00000005374) ENSMGAG00000005367 MLANA (ENSMGAG00000005363) KIAA2026 (ENSMGAG00000021166) Anatidae ANCESTRAL SPECIES 20 ENSGT00940000157105 ENSGT00940000155389.d.c ENSGT00940000155389.c ENSGT00940000155498 ENSGT00390000009329 ENSGT00390000007246 ENSGT00940000155897.mb.a ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00640000091523 #16 ENSGT00950000185125 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b.e #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154396.a ENSGT00390000000375 ENSGT00940000161373 ENSGT00390000002955 Pink-footed goose MODERN SPECIES 236 SMARCA2 (ENSABRG00000010971) #22 VLDLR (ENSABRG00000009580) #24 KCNV2 (ENSABRG00000009444) #25 PUM3 (ENSABRG00000009367) #26 ENSABRG00000009339 ENSABRG00000009271 #27 GLIS3 (ENSABRG00000009214) #28 SLC1A1 (ENSABRG00000009175) #29 Duck DUPLICATION Duck MODERN SPECIES 94 ENSAPLG00000024781 #22 Duck MODERN SPECIES 4281 TNPO1 (ENSAPLG00000009619) ENSAPLG00000022145 ZNF366 (ENSAPLG00000010278) ENSAPLG00000019695 MRPS27 (ENSAPLG00000010577) MAP1B (ENSAPLG00000030918) PGM5 (ENSAPLG00000011043) #14 TMEM252 (ENSAPLG00000010990) #13 ENSAPLG00000012182 #16 ENSAPLG00000025062 ENSAPLG00000017480 #17 ENSAPLG00000012724 #17 KANK1 (ENSAPLG00000020411) #18 DMRT3 (ENSAPLG00000013743) #20 DMRT2 (ENSAPLG00000013872) #21 SMARCA2 (ENSAPLG00000013873) #22 ENSAPLG00000015474 #24 KCNV2 (ENSAPLG00000018126) #25 PUM3 (ENSAPLG00000002920) #26 ENSAPLG00000019362 RFX3 (ENSAPLG00000011096) #27 GLIS3 (ENSAPLG00000014844) #28 SLC1A1 (ENSAPLG00000015022) #29 CDC37L1 (ENSAPLG00000006614) #32 AK3 (ENSAPLG00000006356) #33 RCL1 (ENSAPLG00000006031) #34 JAK2 (ENSAPLG00000004748) #35 ENSAPLG00000011419 PLGRKT (ENSAPLG00000018947) ENSAPLG00000004669 PDCD1LG2 (ENSAPLG00000004593) Anura ANCESTRAL SPECIES 29 ENSGT00940000155164 ENSGT00940000158634 #10 ENSGT00390000005811 #11 ENSGT00940000156639 ENSGT00390000005250 #13 ENSGT00940000158126 #14 ENSGT00940000157140.a ENSGT00940000163497 ENSGT00940000164556 ENSGT00640000091523 #16 ENSGT00940000155876 #17 ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000155460 #24 ENSGT00940000157438 #25 ENSGT00390000015757 #26 ENSGT00940000164013 ENSGT01050000244879.a.a.b #27 ENSGT00940000156896 #28 ENSGT00940000155397.b #29 ENSGT00530000063821.b.b #30 ENSGT00390000013443.d #32 ENSGT00940000155120 #33 ENSGT00530000063404.a #34 ENSGT00940000155640 #35 ENSGT00940000154434 #37 ENSGT00390000000375 ENSGT00940000161373 Leishan spiny toad MODERN SPECIES ENSLLEG00000022171 ENSLLEG00000022237 ENSLLEG00000022271 ENSLLEG00000022376 ENSLLEG00000022440 #16 DOCK8 (ENSLLEG00000000077) #17 KANK1 (ENSLLEG00000000147) #18 ENSLLEG00000000168 DMRT1 (ENSLLEG00000000180) #19 DMRT3 (ENSLLEG00000000195) #20 ENSLLEG00000000201 DMRT2 (ENSLLEG00000000206) #21 ENSLLEG00000000229 ENSLLEG00000000269 ENSLLEG00000000280 SMARCA2 (ENSLLEG00000000350) #22 ENSLLEG00000000580 VLDLR (ENSLLEG00000000597) #24 KCNV2 (ENSLLEG00000000652) #25 PUM3 (ENSLLEG00000000665) #26 RFX3 (ENSLLEG00000000718) #27 ENSLLEG00000000868 ENSLLEG00000000876 GLIS3 (ENSLLEG00000000897) #28 ENSLLEG00000000928 SLC1A1 (ENSLLEG00000001013) #29 SPATA6L (ENSLLEG00000001082) #30 CDC37L1 (ENSLLEG00000001174) #32 AK3 (ENSLLEG00000001204) #33 ENSLLEG00000001238 RCL1 (ENSLLEG00000001251) #34 Frog MODERN SPECIES tjp2 (ENSXETG00000001683) pip5k1b (ENSXETG00000001678) ENSXETG00000001676 tmem252 (ENSXETG00000035157) #13 pgm5 (ENSXETG00000001670) #14 foxd4l1.2 (ENSXETG00000001668) foxd4l1.1 (ENSXETG00000001667) XB5815362 [provisional:cyp2j6] (ENSXETG00000001660) cbwd1.1 (ENSXETG00000001666) cbwd2 (ENSXETG00000001656) #16 dock8 (ENSXETG00000001648) #17 kank1 (ENSXETG00000002278) #18 dmrt1 (ENSXETG00000002277) #19 dmrt3 (ENSXETG00000015285) #20 dmrt2 (ENSXETG00000033983) #21 smarca2 (ENSXETG00000015299) #22 vldlr (ENSXETG00000011709) #24 kcnv2 (ENSXETG00000011708) #25 pum3 (ENSXETG00000011707) #26 carm1p1 (ENSXETG00000036672) crygbl.2 (ENSXETG00000048659) rfx3 (ENSXETG00000011698) #27 glis3 (ENSXETG00000011692) #28 slc1a1 (ENSXETG00000011685) #29 spata6l (ENSXETG00000030483) #30 cdc37l1 (ENSXETG00000000595) #32 ak3 (ENSXETG00000000588) #33 rcl1 (ENSXETG00000000592) #34 ENSXETG00000042090 jak2 (ENSXETG00000000586) #35 plgrkt (ENSXETG00000000587) Coelacanth DUPLICATION Coelacanth MODERN SPECIES 897 KANK1 (ENSLACG00000013685) #18 ENSLACG00000022162 DMRT1 (ENSLACG00000013139) #19 DMRT3 (ENSLACG00000012023) #20 DMRT2 (ENSLACG00000011510) #21 SMARCA2 (ENSLACG00000000270) #22 Coelacanth MODERN SPECIES 1155 ENSLACG00000000879 #22 VLDLR (ENSLACG00000006989) #24 KCNV2 (ENSLACG00000007982) #25 PUM3 (ENSLACG00000008312) #26 ENSLACG00000009739 RFX3 (ENSLACG00000011846) #27 Actinopterygii ANCESTRAL SPECIES 65 ENSGT00940000154969.b ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.a.a ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 ENSGT00530000064292 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 Reedfish MODERN SPECIES 15 hmgcs1 (ENSECRG00000010062) TMEM8B (ENSECRG00000010078) ENSECRG00000010092 ENSECRG00000010100 tars1 (ENSECRG00000010130) gas1a (ENSECRG00000010191) dapk1 (ENSECRG00000010207) si:dkey-26g8.5 (ENSECRG00000010227) fbp2 (ENSECRG00000010235) FBP1 (ENSECRG00000010251) KANK1 (ENSECRG00000010264) #18 dmrt1 (ENSECRG00000010275) #19 ENSECRG00000010288 dmrt3a (ENSECRG00000010299) #20 dmrt2a (ENSECRG00000010306) #21 smarca2 (ENSECRG00000010322) #22 adamts3 (ENSECRG00000011880) ENSECRG00000011896 NPFFR2 (ENSECRG00000011914) gc (ENSECRG00000011938) slc4a4a (ENSECRG00000012016) dck (ENSECRG00000012135) mob1bb (ENSECRG00000012154) GRSF1 (ENSECRG00000012177) rufy3 (ENSECRG00000012250) ENSECRG00000012363 cxcl11.1 (ENSECRG00000012371) cxcl11.1 (ENSECRG00000012379) ENSECRG00000012390 ENSECRG00000012405 cnot6l (ENSECRG00000012417) Neopterygii ANCESTRAL SPECIES 26 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b ENSGT00390000000113.B ENSGT00940000156290 ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 ENSGT00530000064292 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174 ENSGT00940000157548 ENSGT00940000155291 Spotted gar MODERN SPECIES 658 ENSLOCG00000011364 dab2 (ENSLOCG00000011371) c9 (ENSLOCG00000011377) TMEM8B (ENSLOCG00000011389) ENSLOCG00000011395 tars1 (ENSLOCG00000011402) gas1a (ENSLOCG00000017545) dapk1 (ENSLOCG00000011423) ctsla (ENSLOCG00000011433) fbp2 (ENSLOCG00000011443) fbp1b (ENSLOCG00000011449) KANK1 (ENSLOCG00000011458) #18 dmrt1 (ENSLOCG00000011472) #19 dmrt3a (ENSLOCG00000011480) #20 dmrt2a (ENSLOCG00000011487) #21 smarca2 (ENSLOCG00000011499) #22 adamts3 (ENSLOCG00000011512) NPFFR2 (ENSLOCG00000011523) ENSLOCG00000011536 slc4a4a (ENSLOCG00000011541) DCK (ENSLOCG00000011567) mob1bb (ENSLOCG00000011573) GRSF1 (ENSLOCG00000011589) rufy3 (ENSLOCG00000011601) ENSLOCG00000011622 nop14 (ENSLOCG00000011611) mfsd10 (ENSLOCG00000011631) add1 (ENSLOCG00000011644) C18orf32 (ENSLOCG00000011664) DYM (ENSLOCG00000011668) CTIF (ENSLOCG00000011697) Osteoglossocephalai ANCESTRAL SPECIES 8 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.a #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT00940000156035 ENSGT01080000257489 ENSGT00530000064292 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174.f ENSGT00940000157548 Osteoglossiformes ANCESTRAL SPECIES 169 ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762 ENSGT00940000155567 ENSGT01050000244902.a.a.a.b ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a.a ENSGT00940000153424.a.b.a ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.b.e ENSGT00940000154886.a.a.g.b #18 ENSGT00940000160420.c #20 ENSGT00940000156282.a.a.g #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT00940000157321 ENSGT00940000158529 Asian bonytongue MODERN SPECIES 8 mccc2 (ENSSFOG00015015370) ENSSFOG00015015341 DAB2 (ENSSFOG00015015237) TMEM8B (ENSSFOG00015015208) ENSSFOG00015025706 ENSSFOG00015015181 tars1 (ENSSFOG00015015118) gas1a (ENSSFOG00015027640) dapk1 (ENSSFOG00015015059) ctsla (ENSSFOG00015015031) fbp2 (ENSSFOG00015015025) ENSSFOG00015015007 ENSSFOG00015014968 #18 dmrt3a (ENSSFOG00015014937) #20 dmrt2a (ENSSFOG00015014922) #21 SMARCA2 (ENSSFOG00015014870) #22 adamts3 (ENSSFOG00015014846) NPFFR2 (ENSSFOG00015029921) gc (ENSSFOG00015014799) slc4a4a (ENSSFOG00015032673) dck (ENSSFOG00015014636) ENSSFOG00015030617 rufy3 (ENSSFOG00015014519) NPFFR2 (ENSSFOG00015014828) slc4a4a (ENSSFOG00015014669) ENSSFOG00015030739 ENSSFOG00015014499 mrpl1 (ENSSFOG00015014444) fras1 (ENSSFOG00015014319) bmp2k (ENSSFOG00015014230) paqr3a (ENSSFOG00015014198) P. kingsleyae MODERN SPECIES 180 gas1a (ENSPKIG00000018079) dapk1 (ENSPKIG00000018149) fbp2 (ENSPKIG00000018383) dmrt2a (ENSPKIG00000018410) #21 ENSPKIG00000018469 #22 adamts3 (ENSPKIG00000018591) slc4a4a (ENSPKIG00000018691) med27 (ENSPKIG00000018804) ENSPKIG00000018856 pomt1 (ENSPKIG00000018915) PPIL3 (ENSPKIG00000019031) fgf5 (ENSPKIG00000019047) prdm8b (ENSPKIG00000019066) bmp2k (ENSPKIG00000019084) fras1 (ENSPKIG00000019151) ENSPKIG00000019282 mrpl1 (ENSPKIG00000019299) rufy3 (ENSPKIG00000019344) grsf1 (ENSPKIG00000019432) ENSPKIG00000019469 Clupeocephala ANCESTRAL SPECIES 239 ENSGT00940000166263 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 Otomorpha ANCESTRAL SPECIES 33 ENSGT00940000158491.a ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000155567 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000158529 ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 ENSGT01030000234997 ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174.f Clupeiformes ANCESTRAL SPECIES 77 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000158529 ENSGT00940000156035 ENSGT01080000257489 ENSGT01030000234997 ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174.f ENSGT00940000158711 Atlantic herring MODERN SPECIES 23 elovl7a (ENSCHAG00000026800) zcchc8 (ENSCHAG00000026801) DAB2 (ENSCHAG00000026804) TMEM8B (ENSCHAG00000026814) ENSCHAG00000026822 ENSCHAG00000026831 tars1 (ENSCHAG00000026904) gas1a (ENSCHAG00000027396) dapk1 (ENSCHAG00000027445) ctsla (ENSCHAG00000027488) fbp2 (ENSCHAG00000000965) ENSCHAG00000001123 #18 dmrt1 (ENSCHAG00000001231) #19 dmrt3a (ENSCHAG00000001256) #20 dmrt2a (ENSCHAG00000001301) #21 smarca2 (ENSCHAG00000001539) #22 adamts3 (ENSCHAG00000003933) NPFFR2 (ENSCHAG00000009148) gc (ENSCHAG00000009172) slc4a4a (ENSCHAG00000009209) mob1ba (ENSCHAG00000010808) GRSF1 (ENSCHAG00000010995) rufy3 (ENSCHAG00000011029) ENSCHAG00000012187 cxcl11.1 (ENSCHAG00000012224) ENSCHAG00000012277 ENSCHAG00000012312 cnot6l (ENSCHAG00000012356) mrpl1 (ENSCHAG00000012472) fras1 (ENSCHAG00000012524) anxa3a (ENSCHAG00000013950) Denticle herring MODERN SPECIES 282 ENSDCDG00000018633 ggt5a (ENSDCDG00000018624) dmrt1 (ENSDCDG00000018262) #19 dmrt3a (ENSDCDG00000018245) #20 dmrt2a (ENSDCDG00000018243) #21 smarca2 (ENSDCDG00000014797) #22 adamts3 (ENSDCDG00000013813) gldc (ENSDCDG00000013789) coq2 (ENSDCDG00000013786) mfsd10 (ENSDCDG00000013711) ENSDCDG00000013699 ENSDCDG00000013693 TMEM50B (ENSDCDG00000013689) ENSDCDG00000013685 mllt11 (ENSDCDG00000013679) gabpb2a (ENSDCDG00000013673) PI4KB (ENSDCDG00000013657) ENSDCDG00000013648 ENSDCDG00000013643 selenoh (ENSDCDG00000013635) ENSDCDG00000013631 Otophysi ANCESTRAL SPECIES 78 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000155567 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 ENSGT01030000234997 ENSGT00940000161751 ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174.f Characiphysae ANCESTRAL SPECIES 36 ENSGT00940000153352.A ENSGT00940000166675 ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 ENSGT01030000234997 ENSGT00940000161751 ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000157548 Channel catfish MODERN SPECIES 14 Mccc2 (ENSIPUG00000012419) ENSIPUG00000012377 dab2 (ENSIPUG00000012221) tmem8b (ENSIPUG00000012178) ggt6 (ENSIPUG00000012153) tars1 (ENSIPUG00000012104) Gas1 (ENSIPUG00000012093) dapk1 (ENSIPUG00000011874) ctsla (ENSIPUG00000011719) fbp2 (ENSIPUG00000011685) fbp1a (ENSIPUG00000011530) kank1 (ENSIPUG00000011334) #18 dmrt1 (ENSIPUG00000011312) #19 dmrt3 (ENSIPUG00000011306) #20 dmrt2a (ENSIPUG00000011295) #21 smarca2 (ENSIPUG00000011060) #22 adamts3 (ENSIPUG00000010920) npffr2 (ENSIPUG00000010900) gc (ENSIPUG00000010871) SLC4A4 (ENSIPUG00000010635) mob1ba (ENSIPUG00000010553) grsf1 (ENSIPUG00000010533) rufy3 (ENSIPUG00000010389) CXCL11.3 (ENSIPUG00000010185) ENSIPUG00000010048 CXCL11.2 (ENSIPUG00000009994) CXCL20.2 (ENSIPUG00000009952) cxcl11.1 (ENSIPUG00000009941) cxcl13 (ENSIPUG00000009919) cnot6l (ENSIPUG00000009879) mrpl1 (ENSIPUG00000009866) Characiphysae_b ANCESTRAL SPECIES 9 ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 ENSGT01030000234997 ENSGT00940000161751.a ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000157548 Characoidei ANCESTRAL SPECIES 35 ENSGT00940000166675 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00390000000113.B ENSGT00940000156290.a ENSGT01050000244898.b.b.e.a ENSGT00940000165677 ENSGT00940000156035 ENSGT01080000257489 ENSGT00940000161751.b ENSGT01030000234997.c ENSGT00940000161751.a ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 Red-bellied piranha MODERN SPECIES 39 ENSPNAG00000003035 ENSPNAG00000014151 ENSPNAG00000014161 TMEM8B (ENSPNAG00000014213) ENSPNAG00000014238 tars1 (ENSPNAG00000014293) gas1a (ENSPNAG00000014302) dapk1 (ENSPNAG00000014365) ctsla (ENSPNAG00000014392) fbp2 (ENSPNAG00000014425) fbp1a (ENSPNAG00000014457) ENSPNAG00000014507 #18 dmrt1 (ENSPNAG00000014524) #19 dmrt3a (ENSPNAG00000014527) #20 dmrt2a (ENSPNAG00000003158) #21 smarca2 (ENSPNAG00000014635) #22 adamts3 (ENSPNAG00000014731) NPFFR2 (ENSPNAG00000014742) ENSPNAG00000014754 gc (ENSPNAG00000003246) slc4a4a (ENSPNAG00000014878) mob1ba (ENSPNAG00000014908) grsf1 (ENSPNAG00000014912) rufy3 (ENSPNAG00000015037) ENSPNAG00000015051 ENSPNAG00000015057 cxcl11.1 (ENSPNAG00000015068) Mexicana tetra MODERN SPECIES 28 gas1a (ENSAMXG00000025638) dapk1 (ENSAMXG00000012193) ctsla (ENSAMXG00000043917) ctsla (ENSAMXG00000042927) fbp2 (ENSAMXG00000012219) fbp1a (ENSAMXG00000012239) ENSAMXG00000012523 #18 dmrt1 (ENSAMXG00000033247) #19 dmrt3a (ENSAMXG00000033043) #20 dmrt2a (ENSAMXG00000012490) #21 smarca2 (ENSAMXG00000012404) #22 adamts3 (ENSAMXG00000012344) NPFFR2 (ENSAMXG00000012321) gc (ENSAMXG00000012314) slc4a4a (ENSAMXG00000012301) mob1ba (ENSAMXG00000013309) grsf1 (ENSAMXG00000012270) rufy3 (ENSAMXG00000012255) ENSAMXG00000039760 ENSAMXG00000036399 cxcl11.1 (ENSAMXG00000038718) ENSAMXG00000040166 ENSAMXG00000040357 cxcl11.1 (ENSAMXG00000042180) cxcl11.1 (ENSAMXG00000008942) ENSAMXG00000036528 Electric eel MODERN SPECIES 20 TMEM8B (ENSEEEG00000004822) ENSEEEG00000004819 tars1 (ENSEEEG00000003576) gas1a (ENSEEEG00000003531) dapk1 (ENSEEEG00000003337) ctsla (ENSEEEG00000003114) fbp2 (ENSEEEG00000003100) fbp1a (ENSEEEG00000003085) ENSEEEG00000003075 #18 dmrt1 (ENSEEEG00000003068) #19 dmrt3a (ENSEEEG00000003065) #20 dmrt2a (ENSEEEG00000003032) #21 smarca2 (ENSEEEG00000002979) #22 adamts3 (ENSEEEG00000002940) NPFFR2 (ENSEEEG00000002938) gc (ENSEEEG00000002926) slc4a4a (ENSEEEG00000001876) mob1ba (ENSEEEG00000001798) grsf1 (ENSEEEG00000001796) rufy3 (ENSEEEG00000001085) ENSEEEG00000001024 cxcl11.1 (ENSEEEG00000001022) cxcl11.1 (ENSEEEG00000001020) cxcl11.6 (ENSEEEG00000001017) ENSEEEG00000001015 ENSEEEG00000001008 cnot6l (ENSEEEG00000000964) mrpl1 (ENSEEEG00000000955) Cyprinoidei ANCESTRAL SPECIES 43 ENSGT00940000155949 ENSGT00390000012762.v ENSGT00940000155567 ENSGT00940000157861 ENSGT00940000161883 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.a.a.e #18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.b #22 ENSGT00940000156085 ENSGT01070000253744.b.b.e.a ENSGT00390000000113.B ENSGT00940000156290.a ENSGT00940000165457.b ENSGT00940000156667 ENSGT00940000154170.A ENSGT00940000164571 ENSGT00950000182940.b.b.e ENSGT01050000244840.A.b.b.a ENSGT00950000183076.a.b.a ENSGT01050000244840.A.a.b.e ENSGT00950000183049.E ENSGT00940000164012.C ENSGT00940000166014 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000155949.e ENSGT00390000012762.v.a ENSGT00940000155567.x.a ENSGT00940000157861.m.b ENSGT00940000161883 ENSGT00940000154969.b.d ENSGT00390000001195.a.a.e ENSGT00940000153424.a.b.c ENSGT00940000153321.b.b.v.a ENSGT00390000015513.a.a.b.b ENSGT00390000015513.a.b.a.c ENSGT00940000154886.a.a.e.a #18 ENSGT00940000156489.b #19 ENSGT00940000160420.f #20 ENSGT00940000156282.a.a.b #21 ENSGT00940000154821.b.fb #22 ENSGT00940000156085.s ENSGT01070000253744.b.b.e.a.a.a ENSGT00390000000113.B.h ENSGT00940000156290.a.a ENSGT00940000165457.b.a ENSGT00940000156667.k ENSGT00940000164571.a ENSGT00950000182940.b.b.e.b ENSGT01050000244840.A.b.b.a.b ENSGT00950000183076.a.b.a.a ENSGT01050000244840.A.a.b.e.a ENSGT00950000183049.E.t.a ENSGT00940000164012.C.d ENSGT00940000166014.g ENSGT00940000156102.q.b.g Goldfish MODERN SPECIES 44 ENSCARG00000024217 DAB2 (ENSCARG00000024223) TMEM8B (ENSCARG00000024233) ENSCARG00000024282 tars1 (ENSCARG00000024520) gas1a (ENSCARG00000030222) ENSCARG00000030229 dapk1 (ENSCARG00000030276) ctsla (ENSCARG00000030758) fbp2 (ENSCARG00000030776) fbp1a (ENSCARG00000030809) ENSCARG00000030842 #18 dmrt1 (ENSCARG00000031029) #19 dmrt3a (ENSCARG00000031347) #20 dmrt2a (ENSCARG00000031374) #21 smarca2 (ENSCARG00000031497) #22 ENSCARG00000032107 adamts3 (ENSCARG00000032241) NPFFR2 (ENSCARG00000036313) ENSCARG00000036330 cox7c (ENSCARG00000036332) RASA1 (ENSCARG00000036380) ccnh (ENSCARG00000036775) tmem161b (ENSCARG00000036839) mef2cb (ENSCARG00000037336) mblac2 (ENSCARG00000037689) lysmd3 (ENSCARG00000037733) ENSCARG00000037761 ARRDC3 (ENSCARG00000037812) nr2f1a (ENSCARG00000037927) fam172a (ENSCARG00000038096) Cyprininae_a ANCESTRAL SPECIES ENSGT00940000155949.e ENSGT00390000012762.v.a ENSGT00940000155567.x.a ENSGT00940000157861.m.b ENSGT00940000161883 ENSGT00940000154969.b.d ENSGT00390000001195.a.a.e ENSGT00940000153424.a.b.c ENSGT00940000153321.b.b.v.a ENSGT00390000015513.a.a.b.b ENSGT00390000015513.a.b.a.c ENSGT00940000154886.a.a.e.a #18 ENSGT00940000156489.b #19 ENSGT00940000160420.f #20 ENSGT00940000156282.a.a.b #21 ENSGT00940000154821.b.fb #22 ENSGT00940000156085.s ENSGT01070000253744.b.b.e.a.a.a ENSGT00390000000113.B.h ENSGT00940000156290.a.a ENSGT00940000165457.b.a ENSGT00940000156667.k ENSGT00940000164571.a ENSGT00950000182940.b.b.e.b ENSGT01050000244840.A.b.b.a.b ENSGT00950000183076.a.b.a.a ENSGT01050000244840.A.a.b.e.a ENSGT00950000183049.E.t.a ENSGT00940000164012.C.d ENSGT00940000166014.g ENSGT00940000156102.q.b.g Common carp reference MODERN SPECIES 7 ENSCCRG00000062359 ENSCCRG00000015125 ENSCCRG00000070219 ENSCCRG00000025270 ENSCCRG00000051782 tars1 (ENSCCRG00000024983) gas1a (ENSCCRG00000071957) dapk1 (ENSCCRG00000037031) ctsla (ENSCCRG00000065835) fbp2 (ENSCCRG00000039499) fbp1a (ENSCCRG00000061213) ENSCCRG00000032839 #18 dmrt1 (ENSCCRG00000032706) #19 dmrt3a (ENSCCRG00000032698) #20 dmrt2a (ENSCCRG00000032696) #21 smarca2 (ENSCCRG00000032681) #22 ENSCCRG00000078663 adamts3 (ENSCCRG00000072701) NPFFR2 (ENSCCRG00000075865) gc (ENSCCRG00000028390) slc4a4a (ENSCCRG00000028529) ifngr2 (ENSCCRG00000044672) POLK (ENSCCRG00000065827) ENSCCRG00000044683 sv2ca (ENSCCRG00000017476) F2RL2 (ENSCCRG00000025911) iqgap2 (ENSCCRG00000080066) f2r (ENSCCRG00000025914) ssbp2a (ENSCCRG00000025930) ENSCCRG00000067008 ENSCCRG00000025654 Golden-line barbel MODERN SPECIES 627 tars1 (ENSSGRG00000049559) gas1a (ENSSGRG00000049744) dapk1 (ENSSGRG00000049748) ctsla (ENSSGRG00000050025) fbp2 (ENSSGRG00000050030) fbp1a (ENSSGRG00000050063) ENSSGRG00000050080 #18 dmrt1 (ENSSGRG00000050083) #19 dmrt2a (ENSSGRG00000050091) #21 smarca2 (ENSSGRG00000050098) #22 adamts3 (ENSSGRG00000050500) Cyprininae ANCESTRAL SPECIES 53 ENSGT00940000166675 ENSGT00940000155949.f ENSGT00390000012762.v.b ENSGT00940000155567.x.b ENSGT00940000157861.m.a ENSGT00940000154969.b.c ENSGT00390000001195.a.a.f ENSGT00940000153424.a.b.d ENSGT00940000153321.b.b.v.b ENSGT00390000015513.a.a.b.a ENSGT00390000015513.a.b.a.d ENSGT00940000154886.a.a.e.b #18 ENSGT00940000156489.a #19 ENSGT00940000160420.e #20 ENSGT00940000156282.a.a.a #21 ENSGT00940000154821.b.gb #22 ENSGT00940000156085.t ENSGT01070000253744.b.b.e.a.a.b ENSGT00390000000113.B.g ENSGT00940000156290.a.b ENSGT00940000165457.b.b ENSGT00940000156667.l ENSGT00940000154170.A ENSGT00940000164571.b ENSGT00950000182940.b.b.e.a ENSGT00950000183076.a.b.a.b ENSGT01050000244840.A.b.b.a.a ENSGT01050000244840.A.a.b.e.b ENSGT00950000183049.E.t.b ENSGT00940000164012.C.c ENSGT00940000166014.h Goldfish MODERN SPECIES 23 hspb11 (ENSCARG00000009149) mccc2 (ENSCARG00000009178) ENSCARG00000009493 DAB2 (ENSCARG00000009548) TMEM8B (ENSCARG00000009588) tars1 (ENSCARG00000009832) gas1a (ENSCARG00000014625) dapk1 (ENSCARG00000014658) ctsla (ENSCARG00000014920) fbp2 (ENSCARG00000014970) fbp1a (ENSCARG00000014995) ENSCARG00000015018 #18 dmrt1 (ENSCARG00000015111) #19 dmrt3a (ENSCARG00000015270) #20 dmrt2a (ENSCARG00000015272) #21 smarca2 (ENSCARG00000015308) #22 adamts3 (ENSCARG00000015706) NPFFR2 (ENSCARG00000018894) ENSCARG00000018903 ENSCARG00000018907 slc4a4a (ENSCARG00000019161) ifngr2 (ENSCARG00000025619) POLK (ENSCARG00000025641) ANKDD1B (ENSCARG00000025684) ENSCARG00000025709 sv2ca (ENSCARG00000025726) iqgap2 (ENSCARG00000026236) F2RL2 (ENSCARG00000036677) ENSCARG00000036686 f2r (ENSCARG00000036706) ssbp2a (ENSCARG00000036772) Cyprininae_a ANCESTRAL SPECIES 151 ENSGT00940000166675 ENSGT00940000155949.f ENSGT00940000171993 ENSGT00940000155567.x.b ENSGT00940000157861.m.a ENSGT00940000154969.b.c ENSGT00390000001195.a.a.f ENSGT00940000153424.a.b.d ENSGT00940000153321.b.b.v.b ENSGT00390000015513.a.a.b.a ENSGT00390000015513.a.b.a.d ENSGT00940000154886.a.a.e.b #18 ENSGT00940000156489.a #19 ENSGT00940000160420.e #20 ENSGT00940000156282.a.a.a #21 ENSGT00940000154821.b.gb #22 ENSGT00940000156085.t ENSGT01070000253744.b.b.e.a.a.b ENSGT00390000000113.B.g ENSGT00940000156290.a.b ENSGT00940000156667.l ENSGT00940000164571.b ENSGT00950000182940.b.b.e.a ENSGT01050000244840.A.b.b.a.a ENSGT00950000183076.a.b.a.b ENSGT01050000244840.A.a.b.e.b ENSGT00950000183049.E.t.b ENSGT00940000164012.C.c ENSGT00940000166014.h ENSGT00940000156102.q.b.h ENSGT00940000156102.q.a.b Common carp reference MODERN SPECIES 15 smn1 (ENSCCRG00000041959) hspb11 (ENSCCRG00000041954) mccc2 (ENSCCRG00000014989) ENSCCRG00000059851 ENSCCRG00000055634 ENSCCRG00000042761 tars1 (ENSCCRG00000033752) dapk1 (ENSCCRG00000015435) ctsla (ENSCCRG00000058422) fbp2 (ENSCCRG00000073989) fbp1a (ENSCCRG00000080555) ENSCCRG00000039510 #18 dmrt1 (ENSCCRG00000039591) #19 dmrt3a (ENSCCRG00000048607) #20 dmrt2a (ENSCCRG00000061986) #21 smarca2 (ENSCCRG00000055138) #22 adamts3 (ENSCCRG00000052924) NPFFR2 (ENSCCRG00000028360) gc (ENSCCRG00000001110) slc4a4a (ENSCCRG00000009148) ENSCCRG00000060599 POLK (ENSCCRG00000041529) ENSCCRG00000041503 sv2ca (ENSCCRG00000041429) F2RL2 (ENSCCRG00000041422) iqgap2 (ENSCCRG00000080285) f2r (ENSCCRG00000019984) ssbp2a (ENSCCRG00000019895) ENSCCRG00000041408 ENSCCRG00000025959 ENSCCRG00000070726 Golden-line barbel MODERN SPECIES 610 tars1 (ENSSGRG00000007533) gas1a (ENSSGRG00000007537) dapk1 (ENSSGRG00000007542) ctsla (ENSSGRG00000007603) fbp2 (ENSSGRG00000007997) fbp1a (ENSSGRG00000008083) ENSSGRG00000008259 #18 dmrt1 (ENSSGRG00000008262) #19 dmrt3a (ENSSGRG00000008270) #20 dmrt2a (ENSSGRG00000008275) #21 smarca2 (ENSSGRG00000008436) #22 adamts3 (ENSSGRG00000015665) Zebrafish MODERN SPECIES 20 DAB2 (ENSDARG00000053091) zgc:112966 (ENSDARG00000095369) TMEM8B (ENSDARG00000075126) ENSDARG00000094625 ENSDARG00000094268 tars1 (ENSDARG00000013250) gas1a (ENSDARG00000077298) dapk1 (ENSDARG00000060093) ctsla (ENSDARG00000007836) fbp2 (ENSDARG00000012366) fbp1a (ENSDARG00000021366) ENSDARG00000060102 #18 dmrt1 (ENSDARG00000007349) #19 dmrt3a (ENSDARG00000035290) #20 dmrt2a (ENSDARG00000015072) #21 smarca2 (ENSDARG00000008904) #22 adamts3 (ENSDARG00000060127) NPFFR2 (ENSDARG00000033635) gc (ENSDARG00000089310) slc4a4a (ENSDARG00000013730) ifngr2 (ENSDARG00000067795) POLK (ENSDARG00000059963) ANKDD1B (ENSDARG00000025866) ENSDARG00000059982 sv2ca (ENSDARG00000059997) iqgap2 (ENSDARG00000060010) F2RL2 (ENSDARG00000090524) f2r (ENSDARG00000060012) ssbp2a (ENSDARG00000057395) zgc:110626 (ENSDARG00000053159) si:ch211-130m23.2 (ENSDARG00000095136) Euteleosteomorpha ANCESTRAL SPECIES ENSGT00940000154821.b #22 Acanthomorphata ANCESTRAL SPECIES ENSGT00940000154821.b #22 Euacanthomorphacea ANCESTRAL SPECIES ENSGT00940000154821.b #22 Percomorphaceae ANCESTRAL SPECIES ENSGT00940000154821.b #22 Percomorphaceae_B ANCESTRAL SPECIES ENSGT00940000154821.b #22 Ovalentaria ANCESTRAL SPECIES ENSGT00940000154821.b #22 Atherinomorphae ANCESTRAL SPECIES ENSGT00940000154821.b #22 Cyprinodontiformes ANCESTRAL SPECIES ENSGT00940000154821.b #22 Cyprinodontoidei ANCESTRAL SPECIES ENSGT00940000154821.b #22 NAME_4 ANCESTRAL SPECIES ENSGT00940000154821.b #22 Sheepshead minnow MODERN SPECIES 739 PTCD1 (ENSCVAG00000015826) fbxl18 (ENSCVAG00000015834) ENSCVAG00000015858 ENSCVAG00000015870 ENSCVAG00000015892 ENSCVAG00000015915 ENSCVAG00000016343 fbp2 (ENSCVAG00000016361) fbp1a (ENSCVAG00000016383) ENSCVAG00000016441 ##18 ENSCVAG00000016463 dmrt1 (ENSCVAG00000016485) #19 dmrt3a (ENSCVAG00000016490) #20 dmrt2a (ENSCVAG00000016506) #21 ENSCVAG00000016571 ##22 ENSCVAG00000016587 #22 Protacanthopterygii ANCESTRAL SPECIES ENSGT00940000154821.b #22 Salmoninae ANCESTRAL SPECIES ENSGT00940000154821.b #22 Huchen DUPLICATION Huchen MODERN SPECIES 9389 ENSHHUG00000038855 #22 Huchen DUPLICATION Huchen MODERN SPECIES 7988 ENSHHUG00000022531 #22 ENSHHUG00000022528 #22 Huchen MODERN SPECIES 7988 ENSHHUG00000022531 #22 ENSHHUG00000022528 #22 Huchen MODERN SPECIES 11457 ENSHHUG00000016200 #22 Euteleostomi DUPLICATION Euteleostomi ANCESTRAL SPECIES ENSGT00940000154821.a.a ##22 Actinopterygii ANCESTRAL SPECIES ENSGT00940000154821.a.a ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000154821.a.a ##22 Osteoglossocephalai ANCESTRAL SPECIES 575 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b Osteoglossiformes ANCESTRAL SPECIES 122 ENSGT00940000166272 ENSGT00940000164944.n ENSGT00940000166263.a ENSGT00940000163584.a ENSGT00940000158491.a.b ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000001195.a.a.b ENSGT00940000153424.a.b.b ENSGT00940000153321.b.b ENSGT00390000015513.a.b.b.f ENSGT00940000154886.a.a.g.a #18 ENSGT00940000156489 #19 ENSGT00940000160420.d #20 ENSGT00940000156282.a.a.h #21 ENSGT00940000154821.a.a ##22 Asian bonytongue MODERN SPECIES 21 rhobtb4 (ENSSFOG00015026928) ENSSFOG00015019950 ENSSFOG00015019932 rtkna (ENSSFOG00015019916) ENSSFOG00015019884 dab2 (ENSSFOG00015028048) c9 (ENSSFOG00015019837) gas1b (ENSSFOG00015024998) dapk1 (ENSSFOG00015019739) si:dkey-26g8.5 (ENSSFOG00015019688) ENSSFOG00015019665 ENSSFOG00015019609 #18 dmrt1 (ENSSFOG00015032337) #19 DMRT3 (ENSSFOG00015019574) #20 DMRT2 (ENSSFOG00015019541) #21 ENSSFOG00015019506 ##22 NPFFR2 (ENSSFOG00015019405) SLC4A4 (ENSSFOG00015019317) mob1ba (ENSSFOG00015019281) RUFY3 (ENSSFOG00015019217) ENSSFOG00015019206 cxcl11.6 (ENSSFOG00015019137) ENSSFOG00015019118 ENSSFOG00015019085 cnot6l (ENSSFOG00015019044) anxa3b (ENSSFOG00015018260) paqr3b (ENSSFOG00015018231) antxr2a (ENSSFOG00015018203) PRDM8 (ENSSFOG00015018189) bmp3 (ENSSFOG00015018171) ENSSFOG00015028656 P. kingsleyae MODERN SPECIES 163 rhobtb4 (ENSPKIG00000003871) ENSPKIG00000003740 ENSPKIG00000003676 rtkna (ENSPKIG00000003583) ENSPKIG00000003484 dab2 (ENSPKIG00000003408) c9 (ENSPKIG00000003353) gas1a (ENSPKIG00000003338) dapk1 (ENSPKIG00000003300) ctsla (ENSPKIG00000003259) fbp1b (ENSPKIG00000003215) ENSPKIG00000003169 #18 ENSPKIG00000003133 dmrt3a (ENSPKIG00000003109) #20 DMRT2 (ENSPKIG00000003092) #21 ENSPKIG00000003039 ##22 Clupeocephala ANCESTRAL SPECIES 121 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000158529 ENSGT01000000214878 ENSGT00940000157298 ENSGT00940000162168 ENSGT00940000163761 ENSGT00940000159174.f ENSGT00940000157548 ENSGT00940000155291.a ENSGT00940000156320.c ENSGT00890000139463.b.b.b ENSGT00940000158449 Otomorpha ANCESTRAL SPECIES 557 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b.e.b Clupeiformes ANCESTRAL SPECIES 12 ENSGT00530000063340 ENSGT00940000154437 ENSGT00940000174898 ENSGT00940000166467 ENSGT00950000182938.b.b.b.b.b.b.i.b.a.b ENSGT00940000159146 ENSGT00390000014907.B ENSGT00940000158207 ENSGT00940000166813 ENSGT00390000018810 ENSGT00950000183015.D ENSGT00940000153692.A ENSGT00940000155133.b ENSGT01050000244898.b.b.e.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT00390000008823 ENSGT00390000001566 ENSGT00940000157449 ENSGT01020000230359.E ENSGT00940000167600 ENSGT00940000159129 ENSGT00940000156170 ENSGT01030000234618.E ENSGT00390000016258 ENSGT00950000183103.d.a.b ENSGT01030000234535.E.d ENSGT00940000155301.a Atlantic herring MODERN SPECIES 3 ENSCHAG00000022637 ZNF532 (ENSCHAG00000022630) ENSCHAG00000022622 rx3 (ENSCHAG00000022613) cplx4a (ENSCHAG00000022609) lman1 (ENSCHAG00000022472) ccbe1 (ENSCHAG00000022450) HCN1 (ENSCHAG00000022418) ENSCHAG00000021333 esm1 (ENSCHAG00000021313) ARHGAP24 (ENSCHAG00000021267) mapk10 (ENSCHAG00000020156) ptpn13 (ENSCHAG00000019401) mob1bb (ENSCHAG00000019337) ENSCHAG00000019248 ##18 ENSCHAG00000019237 ##22 NPFFR2 (ENSCHAG00000018883) ENSCHAG00000016237 dck (ENSCHAG00000016094) zgc:152948 (ENSCHAG00000016082) wdr91 (ENSCHAG00000016022) RAB27B (ENSCHAG00000015976) MPC2 (ENSCHAG00000015960) acadl (ENSCHAG00000015439) ENSCHAG00000015409 TCF4 (ENSCHAG00000014900) txnl1 (ENSCHAG00000014836) ENSCHAG00000014662 ENSCHAG00000014650 SCARB2 (ENSCHAG00000014549) ENSCHAG00000014530 Denticle herring MODERN SPECIES 13 ENSDCDG00000009425 ENSDCDG00000009408 ZNF532 (ENSDCDG00000009394) ENSDCDG00000009386 rx3 (ENSDCDG00000009378) cplx4a (ENSDCDG00000009371) lman1 (ENSDCDG00000009173) ccbe1 (ENSDCDG00000009103) HCN1 (ENSDCDG00000008944) esm1 (ENSDCDG00000007679) ARHGAP24 (ENSDCDG00000007654) mapk10 (ENSDCDG00000004583) ptpn13 (ENSDCDG00000002672) mob1bb (ENSDCDG00000002594) ENSDCDG00000002589 ##18 ENSDCDG00000002586 ##22 NPFFR2 (ENSDCDG00000002581) ENSDCDG00000000816 dck (ENSDCDG00000000331) zgc:152948 (ENSDCDG00000000319) wdr91 (ENSDCDG00000000255) RAB27B (ENSDCDG00000000191) klhl8 (ENSDCDG00000035774) ENSDCDG00000035770 ENSDCDG00000035767 ENSDCDG00000035765 ENSDCDG00000035763 ENSDCDG00000035761 ENSDCDG00000035758 PPEF2 (ENSDCDG00000035755) NUP54 (ENSDCDG00000035752) Otophysi ANCESTRAL SPECIES 100 ENSGT00390000017030.b.a ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a ENSGT00390000020276.mb.b ENSGT00940000154394.b.a.a.b.b ENSGT00940000164907.b.b ENSGT00940000155151.a.a.b ENSGT00940000164386 ENSGT00390000006922 ENSGT00930000151044 ENSGT00530000064286 ENSGT00940000155151.a.a.a ENSGT00940000164907.b.a ENSGT00620000089226 ENSGT00940000154394.b.a.a.a.a.a.b ENSGT01060000248556.A.a.a.a.b.a Characiphysae ANCESTRAL SPECIES 142 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a ENSGT00390000020276.mb.b ENSGT00390000020276.mb.a ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000164907.b.b ENSGT00940000155151.a.a.b ENSGT00940000164386 ENSGT00390000006922 ENSGT00930000151044 ENSGT00530000064286 ENSGT01060000248556.A.a.a.a.b.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b Channel catfish MODERN SPECIES 20 ift22 (ENSIPUG00000008609) ftr82 (ENSIPUG00000008590) ftr83 (ENSIPUG00000008538) ptges (ENSIPUG00000008525) usp20 (ENSIPUG00000008278) c28h9orf78 (ENSIPUG00000008211) med22 (ENSIPUG00000008190) rpl7a (ENSIPUG00000008146) surf1 (ENSIPUG00000008089) surf6 (ENSIPUG00000008066) kyat1 (ENSIPUG00000008008) kyat1 (ENSIPUG00000007984) kyat1 (ENSIPUG00000007957) prkaa1 (ENSIPUG00000007912) ENSIPUG00000007883 ##18 ENSIPUG00000007855 ##22 NPFFR2 (ENSIPUG00000007782) ENSIPUG00000007759 ENSIPUG00000007750 ENSIPUG00000007738 lmo4a (ENSIPUG00000007705) ccn1l1 (ENSIPUG00000007680) pole3 (ENSIPUG00000007668) rpl12 (ENSIPUG00000007575) Lrsam1 (ENSIPUG00000007487) ENSIPUG00000007367 crat (ENSIPUG00000007250) ptpa (ENSIPUG00000007164) ier5l (ENSIPUG00000007148) ntmt1 (ENSIPUG00000007083) ENSIPUG00000007066 Characiphysae_b ANCESTRAL SPECIES 43 ENSGT00530000063405.b.f ENSGT00950000183155.a.a.a.b ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00390000020276.mb.a ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000164907.b.b ENSGT00940000155151.a.a.b ENSGT00940000164386 ENSGT00390000006922 ENSGT00930000151044 ENSGT00530000064286 ENSGT01060000248556.A.a.a.a.b.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00940000160451 Characoidei ANCESTRAL SPECIES 69 ENSGT00530000063405.b.f ENSGT00950000183155.a.a.a.b ENSGT00940000155545.b ENSGT01010000222313.A.b.b.b.a ENSGT00390000016067 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000155193 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00940000158865 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000164907.b.b ENSGT00940000155151.a.a.b ENSGT00940000164386 ENSGT00390000006922 ENSGT00930000151044 ENSGT00530000064286 ENSGT01060000248556.A.a.a.a.b.a ENSGT00390000011500 ENSGT00900000141021.b.a.d ENSGT00390000008371.b ENSGT00930000151050 ENSGT00940000160451 ENSGT00940000154645.B ENSGT00930000151016 Red-bellied piranha MODERN SPECIES 96 TBCEL (ENSPNAG00000009784) TECTA (ENSPNAG00000009763) ENSPNAG00000029516 ENSPNAG00000029359 TIMM22 (ENSPNAG00000005699) ptges (ENSPNAG00000029325) usp20 (ENSPNAG00000029303) zgc:103692 (ENSPNAG00000029243) med22 (ENSPNAG00000029208) rpl7a (ENSPNAG00000029194) surf1 (ENSPNAG00000006796) surf6 (ENSPNAG00000006939) kyat1 (ENSPNAG00000029006) prkaa1 (ENSPNAG00000004485) ENSPNAG00000028947 ##18 ENSPNAG00000028939 ##22 znrf2b (ENSPNAG00000028933) NOD1 (ENSPNAG00000028910) ggctb (ENSPNAG00000005351) SLC6A20 (ENSPNAG00000028847) ENSPNAG00000028761 ENSPNAG00000028742 ENSPNAG00000006566 ENSPNAG00000028723 ENSPNAG00000028720 ENSPNAG00000004847 ENSPNAG00000004408 xrcc1 (ENSPNAG00000004392) drd2l (ENSPNAG00000006971) ENSPNAG00000028465 ethe1 (ENSPNAG00000004361) Mexicana tetra MODERN SPECIES 32 TECTA (ENSAMXG00000012346) ENSAMXG00000012371 ENSAMXG00000012383 TIMM22 (ENSAMXG00000012393) ptges (ENSAMXG00000040752) ENSAMXG00000043964 usp20 (ENSAMXG00000012425) zgc:103692 (ENSAMXG00000012482) med22 (ENSAMXG00000038059) rpl7a (ENSAMXG00000012525) surf1 (ENSAMXG00000012501) surf6 (ENSAMXG00000012546) kyat1 (ENSAMXG00000012558) prkaa1 (ENSAMXG00000037858) ENSAMXG00000033982 ##18 ENSAMXG00000037089 ##22 ENSAMXG00000034527 NPFFR2 (ENSAMXG00000012627) golga7 (ENSAMXG00000034794) Electric eel MODERN SPECIES 29 TECTA (ENSEEEG00000014863) ENSEEEG00000014866 ENSEEEG00000014867 ENSEEEG00000014964 TIMM22 (ENSEEEG00000014966) ptges (ENSEEEG00000014967) usp20 (ENSEEEG00000014969) zgc:103692 (ENSEEEG00000014971) med22 (ENSEEEG00000014972) RPL7A (ENSEEEG00000014979) surf1 (ENSEEEG00000014996) surf6 (ENSEEEG00000014997) kyat1 (ENSEEEG00000014998) prkaa1 (ENSEEEG00000015011) ENSEEEG00000015021 ##18 ENSEEEG00000015040 ##22 NPFFR2 (ENSEEEG00000015048) ENSEEEG00000015134 ENSEEEG00000015143 lmo4a (ENSEEEG00000015152) ccn1l1 (ENSEEEG00000015155) pole3 (ENSEEEG00000015165) rpl12 (ENSEEEG00000015168) lrsam1 (ENSEEEG00000015206) crata (ENSEEEG00000015351) ptpa (ENSEEEG00000015855) ier5l (ENSEEEG00000016141) ntmt1 (ENSEEEG00000016143) ndor1 (ENSEEEG00000016145) gpr107 (ENSEEEG00000016155) ncs1a (ENSEEEG00000016162) Cyprinoidei ANCESTRAL SPECIES 19 ENSGT00940000155853.d.a ENSGT00940000156689 ENSGT00940000164999 ENSGT00940000159362 ENSGT00390000011980.b.b ENSGT00940000158829 ENSGT00390000009787 ENSGT00390000004339 ENSGT00940000153294 ENSGT00530000064194 ENSGT00390000006980 ENSGT00940000158797 ENSGT00950000182857.a.b ENSGT00940000158865 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a ENSGT00390000020276.mb.b ENSGT00390000020276.mb.a ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000154394.b.a.a.b.b.c.b ENSGT00940000164907.b.b ENSGT00940000155151.a.a.b ENSGT00940000164386 ENSGT00390000006922 ENSGT00930000151044 ENSGT00530000064286 ENSGT00940000155151.a.a.a ENSGT00940000164907.b.a ENSGT00620000089226 Cyprininae DUPLICATION Cyprininae ANCESTRAL SPECIES ENSGT00940000155853.d.a.f ENSGT00940000156689.d ENSGT00940000164999.g ENSGT00940000159362.g ENSGT00390000011980.b.b.a ENSGT00940000158829.a ENSGT00390000009787.cb ENSGT00390000004339.s ENSGT00940000153294.h ENSGT00530000064194.g ENSGT00390000006980.c ENSGT00940000158797.v ENSGT00950000182857.a.b ENSGT00940000158865.o ENSGT00940000154886.a.b.k ##18 ENSGT00940000154821.a.a.a ##22 ENSGT00940000165492.a.a.c.a ENSGT00940000154394.b.a.a.b.b.c.b ENSGT00940000164907.b.b.b.b ENSGT00940000155151.a.a.b.a ENSGT00940000164386.f ENSGT00390000006922.d ENSGT00930000151044.a ENSGT01060000248556.A.a.a.a.b.a.c ENSGT00390000011500.f ENSGT00900000141021.b.a.d.c ENSGT00390000008371.b.c ENSGT00930000151050.b ENSGT00940000160451.b ENSGT00940000154645.B.i.b ENSGT00930000151016.y Cyprininae_a ANCESTRAL SPECIES ENSGT00940000158715.f ENSGT00940000155853.d.a.f ENSGT00940000156689.d ENSGT00940000164999.g ENSGT00940000159362.g ENSGT00390000011980.b.b.a ENSGT00940000158829.a ENSGT00390000009787.cb ENSGT00390000004339.s ENSGT00530000064194.g ENSGT00390000006980.c ENSGT00940000158797.v ENSGT00950000182857.a.b ENSGT00940000158865.o ENSGT00940000154886.a.b.k ##18 ENSGT00940000154821.a.a.a ##22 ENSGT00940000165492.a.a.c.a ENSGT00940000154394.b.a.a.b.b.c.a ENSGT00940000164907.b.b.b.b ENSGT00940000155151.a.a.b.a ENSGT00940000164386.f ENSGT00390000006922.d ENSGT00930000151044.a ENSGT01060000248556.A.a.a.a.b.a.c ENSGT00390000011500.f ENSGT00900000141021.b.a.d.c ENSGT00390000008371.b.c ENSGT00930000151050.b ENSGT00940000160451.b ENSGT00940000163010.u.b ENSGT00930000151016.y Golden-line barbel MODERN SPECIES 91 dab2ipb (ENSSGRG00000017238) ttll11 (ENSSGRG00000017237) ENSSGRG00000017236 garnl3 (ENSSGRG00000017234) ptges (ENSSGRG00000017233) usp20 (ENSSGRG00000016911) zgc:103692 (ENSSGRG00000016908) med22 (ENSSGRG00000016907) ENSSGRG00000016903 surf1 (ENSSGRG00000016901) surf6 (ENSSGRG00000016898) kyat1 (ENSSGRG00000016230) ifitm1 (ENSSGRG00000016208) prkaa1 (ENSSGRG00000016198) ENSSGRG00000016196 ##18 ENSSGRG00000016195 ##22 ENSSGRG00000016154 zgc:55461 (ENSSGRG00000016148) lmo4a (ENSSGRG00000016145) ccn1l1 (ENSSGRG00000016144) pole3 (ENSSGRG00000016141) rpl12 (ENSSGRG00000016092) lrsam1 (ENSSGRG00000016091) crata (ENSSGRG00000015586) ptpa (ENSSGRG00000015567) ier5l (ENSSGRG00000015565) ntmt1 (ENSSGRG00000015561) ndor1 (ENSSGRG00000015544) gpr107 (ENSSGRG00000015537) fbxw2 (ENSSGRG00000015532) gas1b (ENSSGRG00000015530) Common carp reference MODERN SPECIES 7 ENSCCRG00000067960 ENSCCRG00000017092 ENSCCRG00000073143 ENSCCRG00000069539 ENSCCRG00000013331 garnl3 (ENSCCRG00000044660) ptges (ENSCCRG00000060524) usp20 (ENSCCRG00000033705) zgc:103692 (ENSCCRG00000034113) med22 (ENSCCRG00000074301) surf1 (ENSCCRG00000081884) RPL7A (ENSCCRG00000034022) kyat1 (ENSCCRG00000062125) prkaa1 (ENSCCRG00000078593) ENSCCRG00000031194 ##18 ENSCCRG00000055438 ##22 ENSCCRG00000052661 ENSCCRG00000031181 ENSCCRG00000054308 lmo4a (ENSCCRG00000075174) ccn1l1 (ENSCCRG00000035740) pole3 (ENSCCRG00000080860) rpl12 (ENSCCRG00000071587) lrsam1 (ENSCCRG00000034301) crata (ENSCCRG00000031927) ptpa (ENSCCRG00000031445) ntmt1 (ENSCCRG00000043894) gpr107 (ENSCCRG00000043862) ENSCCRG00000071330 fbxw2 (ENSCCRG00000053560) dab2 (ENSCCRG00000026586) Cyprininae ANCESTRAL SPECIES 48 ENSGT00390000017030.b.a.g ENSGT00940000155853.d.a.e ENSGT00940000156689.c ENSGT00940000164999.h ENSGT00940000159362.h ENSGT00390000011980.b.b.b ENSGT00940000158829.b ENSGT00390000009787.bb ENSGT00390000004339.t ENSGT00940000153294.g ENSGT00530000064194.h ENSGT00390000006980.d ENSGT00940000158797.u ENSGT00940000158865.p ENSGT00940000154886.a.b.l ##18 ENSGT00940000154821.a.a.b ##22 ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a.c.b ENSGT00940000165492.a.a.d ENSGT00390000020276.mb.a ENSGT00940000154394.b.a.a.a.b.a.b ENSGT00940000164907.b.b.b.a ENSGT00940000155151.a.a.b.b ENSGT00940000164386.e ENSGT00390000006922.c ENSGT00930000151044.b ENSGT00530000064286.n ENSGT01060000248556.A.a.a.a.b.a.d ENSGT00390000011500.e ENSGT00900000141021.b.a.d.d ENSGT00390000008371.b.d Goldfish MODERN SPECIES 23 ENSCARG00000006620 ENSCARG00000006593 ENSCARG00000006548 ms4a17c.1 (ENSCARG00000006531) ENSCARG00000006505 garnl3 (ENSCARG00000006359) ptges (ENSCARG00000006304) usp20 (ENSCARG00000005878) zgc:103692 (ENSCARG00000005767) med22 (ENSCARG00000005742) RPL7A (ENSCARG00000059940) surf1 (ENSCARG00000059885) surf6 (ENSCARG00000059875) kyat1 (ENSCARG00000059358) prkaa1 (ENSCARG00000059027) ENSCARG00000059013 ##22 NPFFR2 (ENSCARG00000059007) ENSCARG00000058950 ENSCARG00000058849 ENSCARG00000058801 lmo4a (ENSCARG00000058713) ccn1l1 (ENSCARG00000058690) pole3 (ENSCARG00000058656) rpl12 (ENSCARG00000058517) lrsam1 (ENSCARG00000057109) ENSCARG00000057036 crata (ENSCARG00000055185) ptpa (ENSCARG00000054252) ier5l (ENSCARG00000054199) ntmt1 (ENSCARG00000054134) ndor1 (ENSCARG00000054025) Cyprininae_a ANCESTRAL SPECIES 22 ENSGT00390000017030.b.a.g ENSGT00940000155853.d.a.e ENSGT00940000156689.c ENSGT00940000164999.h ENSGT00940000159362.h ENSGT00390000011980.b.b.b ENSGT00940000158829.b ENSGT00390000009787.bb ENSGT00390000004339.t ENSGT00940000153294.g ENSGT00530000064194.h ENSGT00390000006980.d ENSGT00940000158797.u ENSGT00940000158865.p ENSGT00940000154886.a.b.l ##18 ENSGT00940000154821.a.a.b ##22 ENSGT01070000253744.b.b.f ENSGT00940000165492.a.a.c.b ENSGT00940000154394.b.a.a.b.b.c.b ENSGT00940000164907.b.b.b.a ENSGT00940000155151.a.a.b.b ENSGT00940000164386.e ENSGT00390000006922.c ENSGT00930000151044.b ENSGT00530000064286.n ENSGT01060000248556.A.a.a.a.b.a.d ENSGT00390000011500.e ENSGT00900000141021.b.a.d.d ENSGT00390000008371.b.d ENSGT00930000151050.a ENSGT00940000160451.a Common carp reference MODERN SPECIES 15 ttll11 (ENSCCRG00000010997) ENSCCRG00000075726 ms4a17c.1 (ENSCCRG00000049327) ENSCCRG00000064986 ENSCCRG00000077186 garnl3 (ENSCCRG00000034141) ptges (ENSCCRG00000077847) usp20 (ENSCCRG00000033287) zgc:103692 (ENSCCRG00000057134) med22 (ENSCCRG00000034299) ENSCCRG00000057824 surf1 (ENSCCRG00000034272) kyat1 (ENSCCRG00000081468) prkaa1 (ENSCCRG00000034210) ENSCCRG00000056731 ##18 ENSCCRG00000001587 ##22 ENSCCRG00000050873 ENSCCRG00000030567 zgc:55461 (ENSCCRG00000028081) lmo4a (ENSCCRG00000035744) ccn1l1 (ENSCCRG00000024280) pole3 (ENSCCRG00000054380) rpl12 (ENSCCRG00000035688) lrsam1 (ENSCCRG00000024030) ENSCCRG00000024040 crata (ENSCCRG00000024065) ptpa (ENSCCRG00000025867) ier5l (ENSCCRG00000057758) ntmt1 (ENSCCRG00000058345) ndor1 (ENSCCRG00000032106) gpr107 (ENSCCRG00000032112) Golden-line barbel MODERN SPECIES 11 dab2ipb (ENSSGRG00000044555) ttll11 (ENSSGRG00000045137) ENSSGRG00000045139 garnl3 (ENSSGRG00000045142) ptges (ENSSGRG00000045144) usp20 (ENSSGRG00000045154) zgc:103692 (ENSSGRG00000045997) med22 (ENSSGRG00000045998) RPL7A (ENSSGRG00000045999) surf1 (ENSSGRG00000046150) surf6 (ENSSGRG00000046151) kyat1 (ENSSGRG00000046159) prkaa1 (ENSSGRG00000046663) ENSSGRG00000046776 ##18 ENSSGRG00000046777 ##18 ENSSGRG00000046778 ##22 NPFFR2 (ENSSGRG00000046781) ENSSGRG00000046830 ENSSGRG00000046831 ENSSGRG00000046834 ENSSGRG00000046838 lmo4a (ENSSGRG00000046844) ccn1l1 (ENSSGRG00000046845) pole3 (ENSSGRG00000046846) rpl12 (ENSSGRG00000046847) lrsam1 (ENSSGRG00000046852) crata (ENSSGRG00000001397) ptpa (ENSSGRG00000003585) ier5l (ENSSGRG00000005440) ntmt1 (ENSSGRG00000005442) ndor1 (ENSSGRG00000005492) Zebrafish MODERN SPECIES 20 ENSDARG00000092593 ENSDARG00000028659 ENSDARG00000093512 garnl3 (ENSDARG00000060631) ptges (ENSDARG00000020136) usp20 (ENSDARG00000027501) C5H9orf78 (ENSDARG00000002220) med22 (ENSDARG00000014148) rpl7a (ENSDARG00000019230) surf1 (ENSDARG00000003592) surf6 (ENSDARG00000035427) kyat1 (ENSDARG00000023645) ifitm1 (ENSDARG00000093303) prkaa1 (ENSDARG00000060596) ENSDARG00000060584 ##18 ENSDARG00000060578 ##22 NPFFR2 (ENSDARG00000060702) ENSDARG00000041724 zgc:55461 (ENSDARG00000041723) lmo4a (ENSDARG00000013853) ccn1l1 (ENSDARG00000035422) pole3 (ENSDARG00000008551) rpl12 (ENSDARG00000006691) lrsam1 (ENSDARG00000060683) ENSDARG00000095142 crata (ENSDARG00000040248) ptpa (ENSDARG00000031985) ier5l (ENSDARG00000054906) ntmt1 (ENSDARG00000022399) ndor1 (ENSDARG00000007429) gpr107 (ENSDARG00000103200) Euteleosteomorpha ANCESTRAL SPECIES 152 ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Protacanthopterygii ANCESTRAL SPECIES 17 ENSGT00940000167011.a ENSGT00940000154290.b ENSGT01080000257489 ENSGT00390000005254.c.a.a ENSGT01030000234535.C ENSGT00390000018830.a.b ENSGT00940000156997.b ENSGT00390000016167 ENSGT00390000006029 ENSGT00550000074846.mb.a ENSGT00900000141071.b.d ENSGT01000000214630 ENSGT00940000156090.b ENSGT00390000018729.a.f ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.f.b ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Northern pike DUPLICATION Northern pike MODERN SPECIES 12 ENSELUG00000011613 mccc2 (ENSELUG00000000415) TMEM8B (ENSELUG00000011515) tars1 (ENSELUG00000011403) gas1a (ENSELUG00000010947) gig2e (ENSELUG00000025963) dapk1 (ENSELUG00000010912) ctsla (ENSELUG00000010848) fbp2 (ENSELUG00000010811) fbp1a (ENSELUG00000010788) ENSELUG00000010767 ##18 ENSELUG00000033087 dmrt1 (ENSELUG00000010698) #19 dmrt3a (ENSELUG00000010386) #20 dmrt2a (ENSELUG00000010372) #21 SMARCA2 (ENSELUG00000010318) ##22 ENSELUG00000026581 adamts3 (ENSELUG00000010111) NPFFR2 (ENSELUG00000024861) slc4a4a (ENSELUG00000009950) Northern pike MODERN SPECIES 13 ENSELUG00000024396 ENSELUG00000024412 ENSELUG00000024465 rpl37 (ENSELUG00000024481) st8sia5 (ENSELUG00000024561) LOXHD1 (ENSELUG00000002422) RNF165 (ENSELUG00000002469) zgc:77838 (ENSELUG00000002487) haus1 (ENSELUG00000002516) atp5fa1 (ENSELUG00000002526) vcp (ENSELUG00000002541) hwa (ENSELUG00000001275) zgc:122979 (ENSELUG00000002557) ENSELUG00000002574 ENSELUG00000002592 ##18 ENSELUG00000000069 ##22 NPFFR2 (ENSELUG00000002622) SLC4A4 (ENSELUG00000002753) dck (ENSELUG00000002787) mob1ba (ENSELUG00000002806) TNPO1 (ENSELUG00000002821) fcho2 (ENSELUG00000000085) TMEM174 (ENSELUG00000002868) btf3 (ENSELUG00000002875) foxd1 (ENSELUG00000002873) ankra2 (ENSELUG00000002891) ARHGEF28 (ENSELUG00000002989) ENC1 (ENSELUG00000003012) hexb (ENSELUG00000003037) gfm2 (ENSELUG00000003075) nsa2 (ENSELUG00000003102) Salmoninae DUPLICATION Salmoninae DUPLICATION Salmoninae ANCESTRAL SPECIES 78 ENSGT00940000154290.b.f ENSGT00940000163461.a.a.a.b.c.b.b.b.b ENSGT01080000257489.f ENSGT00390000005254.c.a.a ENSGT01030000234535.C.a ENSGT00390000018830.a.b ENSGT00940000156997.b.a ENSGT00390000016167.j ENSGT00390000006029 ENSGT00550000074846.mb.a.a ENSGT00900000141071.b.d.b ENSGT01000000214630 ENSGT00940000156090.b.c ENSGT00390000018729.a.f ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a.e.a ##22 ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w ENSGT00940000157105.d.b ENSGT00950000182929.B.a.b.b ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ENSGT00940000157156.q ENSGT00940000155831.cb.d Salmoninae_a ANCESTRAL SPECIES 7 ENSGT00940000154290.b.f ENSGT00940000163461.a.a.a.b.c.b.b.b.b ENSGT01080000257489.f ENSGT00390000005254.c.a.a ENSGT01030000234535.C.a ENSGT00390000018830.a.b ENSGT00940000156997.b.a ENSGT00390000016167.j ENSGT00390000006029 ENSGT00550000074846.mb.a.a ENSGT00900000141071.b.d.b ENSGT01000000214630.b ENSGT00940000156090.b.c ENSGT00390000018729.a.f ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a.e.a ##22 ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w ENSGT00940000157105.d.b ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ENSGT00940000157156.q ENSGT00940000155831.cb.d ENSGT00950000182983.B.a.b.f.b.a ENSGT00390000008107.c.a.h ENSGT00390000018706.b Salmo ANCESTRAL SPECIES ENSGT00940000167011.a ENSGT00940000154290.b.f ENSGT00940000163461.a.a.a.b.c.b.b.b.b ENSGT00390000005254.c.a.a ENSGT01030000234535.C.a ENSGT00390000018830.a.b ENSGT00940000156997.b.a ENSGT00390000016167.j ENSGT00390000006029 ENSGT00550000074846.mb.a.a ENSGT00900000141071.b.d.b ENSGT01000000214630.b ENSGT00940000156090.b.c ENSGT00390000018729.a.f ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a.e.a ##22 ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w ENSGT00940000157105.d.b ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b.h ENSGT00940000157156.q ENSGT00940000155831.cb.d ENSGT00950000182983.B.a.b.f.b.a ENSGT00390000008107.c.a.h ENSGT00390000018706.b River trout MODERN SPECIES 15 ENSSTUG00000044479 ENSSTUG00000043974 ENSSTUG00000042475 ENSSTUG00000042352 st8sia5 (ENSSTUG00000042282) LOXHD1 (ENSSTUG00000041783) RNF165 (ENSSTUG00000041727) zgc:77838 (ENSSTUG00000041696) haus1 (ENSSTUG00000041594) atp5fa1 (ENSSTUG00000040150) vcp (ENSSTUG00000039209) hwa (ENSSTUG00000039162) zgc:122979 (ENSSTUG00000039156) ENSSTUG00000039134 ENSSTUG00000039110 ##18 ENSSTUG00000039096 ##22 NPFFR2 (ENSSTUG00000039090) SLC4A4 (ENSSTUG00000036695) dck (ENSSTUG00000036589) MOB1B (ENSSTUG00000036525) TNPO1 (ENSSTUG00000036279) fcho2 (ENSSTUG00000036056) apoa4a (ENSSTUG00000036042) TMEM174 (ENSSTUG00000036035) foxd1 (ENSSTUG00000036032) btf3 (ENSSTUG00000036025) ankra2 (ENSSTUG00000036021) ARHGEF28 (ENSSTUG00000035967) ENC1 (ENSSTUG00000035953) hexb (ENSSTUG00000035782) nsa2 (ENSSTUG00000035751) Atlantic salmon MODERN SPECIES ENSSSAG00000100685 ENSSSAG00000003651 rpl37 (ENSSSAG00000003215) ST8SIA5 (ENSSSAG00000095774) LOXHD1 (ENSSSAG00000002953) RNF165 (ENSSSAG00000002893) zgc:77838 (ENSSSAG00000119651) haus1 (ENSSSAG00000002850) ATPA (ENSSSAG00000002781) ENSSSAG00000002698 ENSSSAG00000107725 ENSSSAG00000002660 ENSSSAG00000002639 ENSSSAG00000002628 ##18 NPFFR2 (ENSSSAG00000002602) ENSSSAG00000002614 ##22 SLC4A4 (ENSSSAG00000001818) DCK (ENSSSAG00000001721) mol1a (ENSSSAG00000001698) TNPO1 (ENSSSAG00000001451) fcho2 (ENSSSAG00000092276) ENSSSAG00000102395 TMEM174 (ENSSSAG00000000709) foxd1 (ENSSSAG00000099692) ENSSSAG00000000689 ankra2 (ENSSSAG00000000631) ENSSSAG00000084502 ENSSSAG00000084001 ENSSSAG00000100616 ARHGEF28 (ENSSSAG00000000544) ENC1 (ENSSSAG00000079458) Oncorhynchus ANCESTRAL SPECIES 19 ENSGT00940000154290.b.f ENSGT00940000163461.a.a.a.b.c.b.b.b.b ENSGT01080000257489.f ENSGT00390000005254.c.a.a ENSGT01030000234535.C.a ENSGT00390000018830.a.b ENSGT00940000156997.b.a ENSGT00390000016167.j ENSGT00390000006029 ENSGT00550000074846.mb.a.a ENSGT00900000141071.b.d.b ENSGT01000000214630.b ENSGT00940000156090.b.c ENSGT00390000018729.a.f ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a.e.a ##22 ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w ENSGT00940000157105.d.b ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ENSGT00940000157156.q ENSGT00940000155831.cb.d ENSGT00950000182983.B.a.b.f.b.a ENSGT00390000008107.c.a.h ENSGT00390000018706.b Oncorhynchus_a ANCESTRAL SPECIES 12 ENSGT00940000154290.b.f ENSGT00940000163461.a.a.a.b.c.b.b.b.b ENSGT01080000257489.f ENSGT00390000005254.c.a.a ENSGT01030000234535.C.a ENSGT00390000018830.a.b ENSGT00940000156997.b.a ENSGT00390000016167.j ENSGT00390000006029 ENSGT00550000074846.mb.a.a ENSGT00900000141071.b.d.b ENSGT01000000214630.b ENSGT00940000156090.b.c ENSGT00390000018729.a.f ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a.e.a ##22 ENSGT01070000253744.b.b.f.b ENSGT00940000156290.b.d ENSGT00940000157321.e.a ENSGT01050000244898.b.b.b ENSGT00940000155389.w ENSGT00940000157105.d.b ENSGT00950000182929.B.a.b.b ENSGT00390000004161.h ENSGT00940000157140.b.a.b.b.d ENSGT00940000153288.b ENSGT00940000157156.q ENSGT00940000155831.cb.d ENSGT00950000182983.B.a.b.f.b.a ENSGT00390000008107.c.a.h ENSGT00390000018706.b Coho salmon MODERN SPECIES 15 ENSOKIG00005038606 ENSOKIG00005037864 rpl37 (ENSOKIG00005037836) ST8SIA5 (ENSOKIG00005037795) LOXHD1 (ENSOKIG00005037390) RNF165 (ENSOKIG00005037349) zgc:77838 (ENSOKIG00005037328) haus1 (ENSOKIG00005037213) atp5fa1 (ENSOKIG00005037113) VCP (ENSOKIG00005035117) hwa (ENSOKIG00005034955) zgc:122979 (ENSOKIG00005034942) ENSOKIG00005034840 ENSOKIG00005034808 ##18 ENSOKIG00005034791 ENSOKIG00005034769 ##22 NPFFR2 (ENSOKIG00005034757) SLC4A4 (ENSOKIG00005034421) dck (ENSOKIG00005034369) MOB1B (ENSOKIG00005034307) TNPO1 (ENSOKIG00005034029) fcho2 (ENSOKIG00005032346) apoa4a (ENSOKIG00005032239) TMEM174 (ENSOKIG00005032225) foxd1 (ENSOKIG00005032220) ENSOKIG00005032187 ankra2 (ENSOKIG00005032143) ENC1 (ENSOKIG00005032125) hexb (ENSOKIG00005031280) ENSOKIG00005031219 NSA2 (ENSOKIG00005031206) Chinook salmon MODERN SPECIES 1784 ENSOTSG00005019929 ##22 Rainbow trout MODERN SPECIES 26 ENSOMYG00000025926 ENSOMYG00000026078 ENSOMYG00000028244 rpl37 (ENSOMYG00000037290) ST8SIA5 (ENSOMYG00000037328) LOXHD1 (ENSOMYG00000037456) RNF165 (ENSOMYG00000037497) zgc:77838 (ENSOMYG00000037519) haus1 (ENSOMYG00000037541) atp5fa1 (ENSOMYG00000037593) ENSOMYG00000037945 ENSOMYG00000039902 ENSOMYG00000039905 ENSOMYG00000039907 ENSOMYG00000039914 ##18 ENSOMYG00000039923 ##22 ENSOMYG00000053809 NPFFR2 (ENSOMYG00000039927) SLC4A4 (ENSOMYG00000040169) DCK (ENSOMYG00000041148) ENSOMYG00000070118 MOB1B (ENSOMYG00000041162) ENSOMYG00000041233 fcho2 (ENSOMYG00000000122) ENSOMYG00000000149 ENSOMYG00000059087 foxd1 (ENSOMYG00000000189) ENSOMYG00000000217 ankra2 (ENSOMYG00000000227) ARHGEF28 (ENSOMYG00000000251) ENSOMYG00000059901 Huchen MODERN SPECIES 896 ENSHHUG00000000174 ENSHHUG00000000156 rpl37 (ENSHHUG00000000137) st8sia5 (ENSHHUG00000000124) ENSHHUG00000000065 ENSHHUG00000000056 RNF165 (ENSHHUG00000000042) zgc:77838 (ENSHHUG00000030360) haus1 (ENSHHUG00000030305) atp5fa1 (ENSHHUG00000030282) ENSHHUG00000030275 vcp (ENSHHUG00000030200) zgc:122979 (ENSHHUG00000030193) ENSHHUG00000030186 ENSHHUG00000030169 ##18 ENSHHUG00000030166 ##22 ENSHHUG00000030164 Salmoninae ANCESTRAL SPECIES 118 ENSGT00940000167350.e ENSGT00950000183162.a.b.j.b ENSGT00950000182943.o ENSGT00940000161102.g ENSGT00940000156317.w.a.f ENSGT00940000167011.b ENSGT00940000154290.b.e ENSGT01080000257489.e ENSGT00390000005254.c.a.b ENSGT01030000234535.C.b ENSGT00390000018830.b ENSGT00940000156997.b.b ENSGT00390000016167.i ENSGT00550000074846.lb ENSGT00940000156090.b.d ENSGT00940000154821.a.a.e.b ##22 ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x ENSGT00940000157105.d.a ENSGT00390000004161 ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ENSGT00940000157156.r ENSGT00940000155831.cb.c ENSGT00950000182983.B.a.b.f.b.b ENSGT00390000008107.c.a.g ENSGT00550000074890.f ENSGT00390000018706.a Salmoninae_a ANCESTRAL SPECIES 80 ENSGT00950000183162.a.b.j.b ENSGT00950000182943.o ENSGT00940000161102.g ENSGT00940000156317.w.a.f ENSGT00940000167011.b ENSGT00940000154290.b.e ENSGT01080000257489.e ENSGT00390000005254.c.a.b ENSGT01030000234535.C.b ENSGT00940000156997.b.b ENSGT00390000016167.i ENSGT00550000074846.mb.a.b ENSGT00900000141071.b.d.a ENSGT01000000214630.a ENSGT00940000156090.b.d ENSGT00940000154821.a.a.e.b ##22 ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x ENSGT00940000157105.d.a ENSGT00390000004161.g ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ENSGT00940000157156.r ENSGT00940000155831.cb.c ENSGT00950000182983.B.a.b.f.b.b ENSGT00390000008107.c.a.g ENSGT00550000074890.f ENSGT00390000018706.a Oncorhynchus ANCESTRAL SPECIES 18 ENSGT00390000005254.d ENSGT01030000234535.C.b ENSGT00940000156997.b.b ENSGT00390000016167.i ENSGT00900000141071.b.d.a ENSGT01000000214630.a ENSGT00940000156090.b.d ENSGT00940000154821.a.a.e.b ##22 ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x ENSGT00940000157105.d.a ENSGT00390000004161.g ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ENSGT00940000157156.r ENSGT00940000155831.cb.c ENSGT00950000182983.B.a.b.f.b.b ENSGT00390000008107.c.a.g ENSGT00550000074890.f ENSGT00390000018706.a Oncorhynchus_a ANCESTRAL SPECIES 47 ENSGT00390000005254.d ENSGT01030000234535.C.b ENSGT00940000156997.b.b ENSGT00390000016167.i ENSGT00900000141071.b.d.a ENSGT01000000214630.a ENSGT00940000156090.b.d ENSGT00940000154821.a.a.e.b ##22 ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x ENSGT00940000157105.d.a ENSGT00390000004161.g ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.a.b.b ENSGT00940000157156.r ENSGT00940000155831.cb.c ENSGT00950000182983.B.a.b.f.b.b ENSGT00390000008107.c.a.g ENSGT00550000074890.f ENSGT00390000018706.a Coho salmon MODERN SPECIES 21 ENSOKIG00005050503 WHRN (ENSOKIG00005050485) ENSOKIG00005050479 MAN1B1 (ENSOKIG00005050474) ENSOKIG00005050471 ENSOKIG00005047629 ehmt1b (ENSOKIG00005046516) rtknb (ENSOKIG00005046467) ENSOKIG00005046451 st8sia5 (ENSOKIG00005046436) RNF165 (ENSOKIG00005046414) zgc:77838 (ENSOKIG00005046395) VCP (ENSOKIG00005045627) ENSOKIG00005045531 ENSOKIG00005045527 ENSOKIG00005045517 ##22 NPFFR2 (ENSOKIG00005045515) SLC4A4 (ENSOKIG00005042034) MOB1B (ENSOKIG00005041667) TNPO1 (ENSOKIG00005040886) fcho2 (ENSOKIG00005039380) TMEM174 (ENSOKIG00005039194) foxd1 (ENSOKIG00005039179) btf3 (ENSOKIG00005039137) ankra2 (ENSOKIG00005039104) ARHGEF28 (ENSOKIG00005038932) ENC1 (ENSOKIG00005038892) hexb (ENSOKIG00005038659) gfm2 (ENSOKIG00005038482) nsa2 (ENSOKIG00005038405) tor1 (ENSOKIG00005038359) Chinook salmon MODERN SPECIES 26 BCR (ENSOTSG00005039880) SPECC1L (ENSOTSG00005039858) ADORA2A (ENSOTSG00005039855) ENSOTSG00005039853 ENSOTSG00005039852 zgc:113162 (ENSOTSG00005039850) NSMF (ENSOTSG00005039849) ENSOTSG00005039846 rpl37 (ENSOTSG00005039836) st8sia5 (ENSOTSG00005039835) RNF165 (ENSOTSG00005039832) zgc:77838 (ENSOTSG00005039830) vcp (ENSOTSG00005039772) hwa (ENSOTSG00005039768) zgc:122979 (ENSOTSG00005039767) ENSOTSG00005039766 ##22 NPFFR2 (ENSOTSG00005039750) SLC4A4 (ENSOTSG00005028448) dck (ENSOTSG00005028395) MOB1B (ENSOTSG00005028267) TNPO1 (ENSOTSG00005027517) fcho2 (ENSOTSG00005024700) TMEM174 (ENSOTSG00005024696) foxd1 (ENSOTSG00005024694) btf3 (ENSOTSG00005024692) ankra2 (ENSOTSG00005024685) ENC1 (ENSOTSG00005024682) hexb (ENSOTSG00005024669) gfm2 (ENSOTSG00005024651) nsa2 (ENSOTSG00005024642) tor1 (ENSOTSG00005024640) Rainbow trout MODERN SPECIES 364 sdy (ENSOMYG00000068768) ENSOMYG00000067890 ENSOMYG00000071258 ENSOMYG00000049821 ENSOMYG00000031753 ENSOMYG00000076326 ENSOMYG00000067853 ENSOMYG00000054492 ENSOMYG00000056085 ENSOMYG00000057258 ST8SIA5 (ENSOMYG00000034302) ENSOMYG00000034366 C18orf25 (ENSOMYG00000034406) ENSOMYG00000034424 ENSOMYG00000034435 ENSOMYG00000034446 ##22 NPFFR2 (ENSOMYG00000034453) SLC4A4 (ENSOMYG00000034651) DCK (ENSOMYG00000034882) MOB1B (ENSOMYG00000034906) TNPO1 (ENSOMYG00000035081) FCHO2 (ENSOMYG00000069297) ENSOMYG00000036506 TMEM174 (ENSOMYG00000037558) foxd1 (ENSOMYG00000037563) Btf3-1 (ENSOMYG00000037569) ankra2 (ENSOMYG00000037576) ARHGEF28 (ENSOMYG00000037598) ENC1 (ENSOMYG00000037623) hexb (ENSOMYG00000037737) gfm2 (ENSOMYG00000038309) Salmo ANCESTRAL SPECIES 1 ENSGT00950000183162.a.b.j.b ENSGT00950000182943.o ENSGT00940000161102.g ENSGT00940000156317.w.a.f ENSGT00940000167011.b ENSGT00940000154290.b.e ENSGT01080000257489.e ENSGT00390000005254.c.a.b ENSGT01030000234535.C.b ENSGT00940000156997.b.b ENSGT00390000016167.i ENSGT00550000074846.mb.a.b ENSGT00900000141071.b.d.a ENSGT01000000214630.a ENSGT00940000156090.b.d ENSGT00940000154821.a.a.e.b ##22 ENSGT01070000253744.b.b.f.a ENSGT00940000156290.b.c ENSGT00940000157321.e.b ENSGT01050000244898.b.b.a ENSGT00940000155389.x ENSGT00940000157105.d.a ENSGT00390000004161.g ENSGT00940000157140.b.a.b.b.c ENSGT00940000153288.b.g ENSGT00940000157156.r ENSGT00940000155831.cb.c ENSGT00950000182983.B.a.b.f.b.b ENSGT00390000008107.c.a.g ENSGT00550000074890.f ENSGT00390000018706.a River trout MODERN SPECIES 3 ved (ENSSTUG00000013629) h2az2b (ENSSTUG00000013663) PURB (ENSSTUG00000013715) il1b (ENSSTUG00000013720) ENSSTUG00000013763 CNNM4 (ENSSTUG00000013836) ENSSTUG00000013884 ENSSTUG00000014169 rpl37 (ENSSTUG00000014178) st8sia5 (ENSSTUG00000014209) RNF165 (ENSSTUG00000014249) zgc:77838 (ENSSTUG00000014266) atp5fa1 (ENSSTUG00000014277) vcp (ENSSTUG00000014383) hwa (ENSSTUG00000015819) ENSSTUG00000015826 ##22 zgc:122979 (ENSSTUG00000015838) NPFFR2 (ENSSTUG00000015842) SLC4A4 (ENSSTUG00000016091) ENSSTUG00000019120 dck (ENSSTUG00000019125) MOB1B (ENSSTUG00000019143) TNPO1 (ENSSTUG00000019248) fcho2 (ENSSTUG00000019513) TMEM174 (ENSSTUG00000020301) foxd1 (ENSSTUG00000020310) btf3 (ENSSTUG00000020316) ankra2 (ENSSTUG00000020344) ARHGEF28 (ENSSTUG00000020358) ENC1 (ENSSTUG00000020413) hexb (ENSSTUG00000020445) Atlantic salmon MODERN SPECIES 2 cnnm3 (ENSSSAG00000061036) ENSSSAG00000061123 ENSSSAG00000061150 ENSSSAG00000061191 ENSSSAG00000107205 CXL10 (ENSSSAG00000061390) ENSSSAG00000109975 RL37 (ENSSSAG00000061468) ST8SIA5 (ENSSSAG00000098370) RNF165 (ENSSSAG00000121000) C18orf25 (ENSSSAG00000061825) atp5fa1 (ENSSSAG00000061907) ENSSSAG00000063064 ENSSSAG00000104832 ENSSSAG00000067134 ENSSSAG00000067132 ##22 NPFFR2 (ENSSSAG00000034609) SLC4A4 (ENSSSAG00000067184) DCK (ENSSSAG00000068041) MOB1B (ENSSSAG00000100755) TNPO1 (ENSSSAG00000068062) fcho2 (ENSSSAG00000000898) TMEM174 (ENSSSAG00000069497) foxd1 (ENSSSAG00000102047) ENSSSAG00000069505 ankra2 (ENSSSAG00000088737) ARHGEF28 (ENSSSAG00000069533) ENSSSAG00000100343 ENC1 (ENSSSAG00000069539) hexb (ENSSSAG00000069551) gfm2 (ENSSSAG00000069717) Huchen MODERN SPECIES 16 ENSHHUG00000003425 ENSHHUG00000003422 RNF165 (ENSHHUG00000003396) zgc:77838 (ENSHHUG00000003386) ENSHHUG00000003382 vcp (ENSHHUG00000002899) zgc:122979 (ENSHHUG00000002890) ENSHHUG00000002866 ##22 NPFFR2 (ENSHHUG00000002860) SLC4A4 (ENSHHUG00000001565) dck (ENSHHUG00000001529) MOB1B (ENSHHUG00000001436) TNPO1 (ENSHHUG00000001188) fcho2 (ENSHHUG00000001010) foxd1 (ENSHHUG00000000981) ENSHHUG00000000918 ankra2 (ENSHHUG00000000897) ENSHHUG00000000891 ENSHHUG00000000879 ENSHHUG00000000869 ENSHHUG00000000864 ENSHHUG00000000830 ENC1 (ENSHHUG00000000825) Salmoninae ANCESTRAL SPECIES 693 ENSGT00940000156771.j ENSGT00940000156035.y.a ENSGT00940000158529.a ENSGT00940000155949 ENSGT00940000157861 ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b.b ##18 ENSGT00940000160420.h #20 ENSGT00940000156282.a.a.e #21 ENSGT00940000154821.a.a.f ##22 Huchen DUPLICATION Huchen DUPLICATION Huchen MODERN SPECIES 6334 ENSHHUG00000023401 ##22 ENSHHUG00000023396 ##22 Huchen MODERN SPECIES 6334 ENSHHUG00000023401 ##22 ENSHHUG00000023396 ##22 Huchen MODERN SPECIES 7724 ENSHHUG00000017538 ##22 Salmoninae_a ANCESTRAL SPECIES 50 ENSGT00940000159010.e.a ENSGT00940000156771.j ENSGT00940000156035.y.a ENSGT00940000158529.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000155949 ENSGT00420000029943 ENSGT00940000157861 ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b.b ##18 ENSGT00940000160420.h #20 ENSGT00940000156282.a.a.e #21 ENSGT00940000154821.a.a.f ##22 ENSGT00940000156085 Salmo ANCESTRAL SPECIES 19 ENSGT00940000153189.A ENSGT00940000159010.e.a ENSGT00940000156771.j ENSGT00940000156035.y.a ENSGT00940000165677 ENSGT00940000155949.i ENSGT00420000029943 ENSGT00940000157861 ENSGT00390000001195.a.a ENSGT01020000231785.a ENSGT00940000153424.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b.b ##18 ENSGT00940000160420.h #20 ENSGT00940000156282.a.a.e #21 ENSGT00940000154821.a.a.f ##22 ENSGT00940000156085 River trout MODERN SPECIES 39 mccc2 (ENSSTUG00000008590) mccc2 (ENSSTUG00000009985) ENSSTUG00000010059 ENSSTUG00000010062 mccc2 (ENSSTUG00000010087) fbxl8 (ENSSTUG00000010111) TMEM8B (ENSSTUG00000010126) gas1a (ENSSTUG00000010144) ENSSTUG00000010151 dapk1 (ENSSTUG00000010166) ENSSTUG00000010280 fbp1a (ENSSTUG00000010287) ENSSTUG00000010312 ##18 dmrt3a (ENSSTUG00000010375) #20 dmrt2a (ENSSTUG00000010422) #21 SMARCA2 (ENSSTUG00000010441) ##22 adamts3 (ENSSTUG00000010671) ENSSTUG00000011099 Atlantic salmon MODERN SPECIES 6 ENSSSAG00000103177 ENSSSAG00000043181 ENSSSAG00000096508 gas1a (ENSSSAG00000102309) ENSSSAG00000111548 dapk1 (ENSSSAG00000108825) ENSSSAG00000108551 fbp1a (ENSSSAG00000095867) ENSSSAG00000114358 ENSSSAG00000118786 dmrt3a (ENSSSAG00000047601) #20 dmrt2a (ENSSSAG00000089152) #21 ENSSSAG00000031294 ENSSSAG00000043060 ENSSSAG00000014321 SMARCA2 (ENSSSAG00000045598) ##22 adamts3 (ENSSSAG00000047659) ENSSSAG00000104997 tfap2d (ENSSSAG00000083685) ENSSSAG00000085616 ENSSSAG00000122164 KIF3C (ENSSSAG00000120471) ENSSSAG00000112119 ENSSSAG00000081879 selenoi (ENSSSAG00000059365) tbx18 (ENSSSAG00000107202) ENSSSAG00000054711 ENSSSAG00000097427 ENSSSAG00000097093 hmgn3 (ENSSSAG00000099936) ENSSSAG00000117369 Oncorhynchus ANCESTRAL SPECIES 12 ENSGT00940000156859.dc.b ENSGT00490000043385.qc ENSGT00940000153241.A ENSGT00940000153189.A ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000155949.k ENSGT00420000029943 ENSGT00940000157861 ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b.a.a ##18 ENSGT00940000160420.h #20 ENSGT00940000156282.a.a.e #21 ENSGT00940000154821.a.a.f ##22 ENSGT00940000156085 Rainbow trout MODERN SPECIES 2 ENSOMYG00000003796 gas1a (ENSOMYG00000003862) ENSOMYG00000051116 dapk1 (ENSOMYG00000074632) fbp1a (ENSOMYG00000035650) ENSOMYG00000035672 ENSOMYG00000056551 ENSOMYG00000048204 ENSOMYG00000035683 ##18 dmrt3a (ENSOMYG00000073783) #20 dmrt2a (ENSOMYG00000030960) #21 ENSOMYG00000072429 SMARCA2 (ENSOMYG00000004868) ##22 ENSOMYG00000068762 ENSOMYG00000060219 adamts3 (ENSOMYG00000007917) ENSOMYG00000049989 ENSOMYG00000003186 ENSOMYG00000003238 ENSOMYG00000003261 ENSOMYG00000003286 ENSOMYG00000039494 ENSOMYG00000061699 ENSOMYG00000074484 ENSOMYG00000062187 ENSOMYG00000065873 psat1 (ENSOMYG00000003398) ENSOMYG00000003457 Oncorhynchus_a ANCESTRAL SPECIES 375 ENSGT00940000160420.h #20 ENSGT00940000156282.a.a.e #21 ENSGT00940000154821.a.a.f ##22 ENSGT00940000156085 Coho salmon MODERN SPECIES 28 dmrt2a (ENSOKIG00005004975) #21 ENSOKIG00005005214 ##22 adamts3 (ENSOKIG00005007422) ENSOKIG00005011130 dmrt3a (ENSOKIG00005011137) #20 ENSOKIG00005011146 ##18 ENSOKIG00005011185 dapk1 (ENSOKIG00005011226) ENSOKIG00005011503 ENSOKIG00005011508 gas1a (ENSOKIG00005011516) ENSOKIG00005011527 TMEM8B (ENSOKIG00005011533) fbxl8 (ENSOKIG00005011546) mccc2 (ENSOKIG00005011620) ENSOKIG00005011814 ENSOKIG00005011830 Chinook salmon MODERN SPECIES 140 ENSOTSG00005024753 ##22 ENSOTSG00005024743 Acanthomorphata ANCESTRAL SPECIES 15 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Cod MODERN SPECIES 17 ENSGMOG00000016604 aqp3b (ENSGMOG00000008057) ENSGMOG00000028072 ENSGMOG00000001879 ENSGMOG00000027430 ENSGMOG00000032812 ENSGMOG00000022806 arid6 (ENSGMOG00000026215) ENSGMOG00000008082 ENSGMOG00000029973 ENSGMOG00000008092 ENSGMOG00000008102 ENSGMOG00000008106 ENSGMOG00000025772 ##18 ENSGMOG00000030708 ##18 ENSGMOG00000008117 ##22 NPFFR2 (ENSGMOG00000008118) SLC4A4 (ENSGMOG00000008121) DCK (ENSGMOG00000008130) mob1bb (ENSGMOG00000008133) TNPO1 (ENSGMOG00000000347) fcho2 (ENSGMOG00000000337) TMEM174 (ENSGMOG00000023180) foxd1 (ENSGMOG00000000330) btf3 (ENSGMOG00000000326) ankra2 (ENSGMOG00000000317) ARHGEF28 (ENSGMOG00000000254) ENC1 (ENSGMOG00000003140) hexb (ENSGMOG00000003149) gfm2 (ENSGMOG00000003177) NSA2 (ENSGMOG00000027946) Euacanthomorphacea ANCESTRAL SPECIES 12 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Pinecone sodierfish MODERN SPECIES 3 sgtb (ENSMMDG00005015991) trappc13 (ENSMMDG00005015997) tnfrsfa (ENSMMDG00005016000) unc5da (ENSMMDG00005016009) ENSMMDG00005016015 aqp3b (ENSMMDG00005016016) arid6 (ENSMMDG00005016017) rtknb (ENSMMDG00005016021) ENSMMDG00005016025 dab2 (ENSMMDG00005016030) ENSMMDG00005016069 gas1b (ENSMMDG00005016412) fbp1b (ENSMMDG00005016413) ENSMMDG00005016416 ##18 ENSMMDG00005016417 ##18 ENSMMDG00005016419 ##22 NPFFR2 (ENSMMDG00005016435) SLC4A4 (ENSMMDG00005016559) dck (ENSMMDG00005020811) mob1bb (ENSMMDG00005020817) TNPO1 (ENSMMDG00005020843) fcho2 (ENSMMDG00005021184) foxd1 (ENSMMDG00005021419) btf3 (ENSMMDG00005021420) ankra2 (ENSMMDG00005021427) nsa2 (ENSMMDG00005021452) gfm2 (ENSMMDG00005021459) hexb (ENSMMDG00005021472) ENC1 (ENSMMDG00005021728) ENSMMDG00005021735 ENSMMDG00005021755 Percomorphaceae ANCESTRAL SPECIES 16 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Tiger tail seahorse MODERN SPECIES 346 ENSHCOG00000000356 HMGCR (ENSHCOG00000012477) lhx5 (ENSHCOG00000012399) mzt2b (ENSHCOG00000012386) ENSHCOG00000012379 ##18 ENSHCOG00000012348 ##22 SLC4A4 (ENSHCOG00000012083) dck (ENSHCOG00000008518) mob1bb (ENSHCOG00000008488) fcho2 (ENSHCOG00000008467) ENSHCOG00000008445 foxd1 (ENSHCOG00000008430) btf3 (ENSHCOG00000008425) ankra2 (ENSHCOG00000008411) tor1 (ENSHCOG00000008396) nsa2 (ENSHCOG00000008385) gfm2 (ENSHCOG00000008208) hexb (ENSHCOG00000008136) ENC1 (ENSHCOG00000007859) egfl7 (ENSHCOG00000007849) agpat2 (ENSHCOG00000007781) Percomorphaceae_B ANCESTRAL SPECIES 16 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Percomorphaceae_C ANCESTRAL SPECIES 17 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Percomorphaceae_D ANCESTRAL SPECIES 15 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Carangaria ANCESTRAL SPECIES 17 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Pleuronectoidei ANCESTRAL SPECIES 7 ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000181170 ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT01040000244713 ENSGT00940000157140.b.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e Tongue sole MODERN SPECIES 5 tmed2 (ENSCSEG00000012180) ptpn11a (ENSCSEG00000012197) ENSCSEG00000012216 pla2g3 (ENSCSEG00000012236) ENSCSEG00000012260 pitpnb (ENSCSEG00000012330) NAA25 (ENSCSEG00000012364) brap (ENSCSEG00000012400) tor4aa (ENSCSEG00000012419) zgc:56235 (ENSCSEG00000012424) SLC25A1 (ENSCSEG00000012434) pi4kaa (ENSCSEG00000012459) gas1b (ENSCSEG00000012543) fbp1b (ENSCSEG00000012550) ENSCSEG00000012569 ##18 ENSCSEG00000012575 ##22 NPFFR2 (ENSCSEG00000012579) SLC4A4 (ENSCSEG00000012599) dck (ENSCSEG00000012658) mob1bb (ENSCSEG00000012669) TNPO1 (ENSCSEG00000012674) fcho2 (ENSCSEG00000012754) foxd1 (ENSCSEG00000012995) btf3 (ENSCSEG00000013006) ankra2 (ENSCSEG00000012998) ARHGEF28 (ENSCSEG00000013022) ENC1 (ENSCSEG00000013077) hexb (ENSCSEG00000013085) gfm2 (ENSCSEG00000013115) nsa2 (ENSCSEG00000013161) tor1 (ENSCSEG00000013176) Turbot MODERN SPECIES 7 erbin (ENSSMAG00000011831) nln (ENSSMAG00000011874) sgtb (ENSSMAG00000011927) trappc13 (ENSSMAG00000011945) ENSSMAG00000011974 ENSSMAG00000011980 unc5da (ENSSMAG00000011998) ENSSMAG00000012072 ENSSMAG00000012094 ENSSMAG00000012116 dab2 (ENSSMAG00000012179) ENSSMAG00000012284 gas1b (ENSSMAG00000012318) ENSSMAG00000012328 ENSSMAG00000030823 ##18 ENSSMAG00000012451 ##22 NPFFR2 (ENSSMAG00000012462) ENSSMAG00000012477 DCK (ENSSMAG00000012596) ENSSMAG00000012614 ENSSMAG00000012624 ENSSMAG00000012727 ENSSMAG00000012741 rpz4 (ENSSMAG00000012747) rpz5 (ENSSMAG00000012752) rpz6 (ENSSMAG00000035282) rpz (ENSSMAG00000012771) ENSSMAG00000031037 nr2f5 (ENSSMAG00000012789) bola1 (ENSSMAG00000012800) SV2A (ENSSMAG00000012812) Carangaria_A ANCESTRAL SPECIES 18 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Seriola ANCESTRAL SPECIES 114 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00390000017382 ENSGT00390000014118 ENSGT00940000156959.A ENSGT00940000159211.C ENSGT00950000183047.d.e ENSGT00390000008726.h.a ENSGT00940000160015 ENSGT00950000182888.a.a.a.e ENSGT00950000182888.a.a.a.f.b ENSGT00950000182888.a.a.a.f.a ENSGT00390000018706 Greater amberjack MODERN SPECIES 357 dab2 (ENSSDUG00000002415) c9 (ENSSDUG00000002372) gas1b (ENSSDUG00000002361) fbp1b (ENSSDUG00000002339) ENSSDUG00000002328 ##18 ENSSDUG00000002319 ##22 NPFFR2 (ENSSDUG00000002250) Yellowtail amberjack MODERN SPECIES 3042 nln (ENSSLDG00000016400) erbin (ENSSLDG00000016321) ENSSLDG00000016285 ENSSLDG00000016213 pik3r1 (ENSSLDG00000016135) ZSWIM6 (ENSSLDG00000016063) ahr2 (ENSSLDG00000016033) mat2al (ENSSLDG00000016008) si:ch73-234b20.5 (ENSSLDG00000015994) hnrnpd (ENSSLDG00000015962) dab2 (ENSSLDG00000015916) c9 (ENSSLDG00000015864) gas1b (ENSSLDG00000015854) fbp1b (ENSSLDG00000015834) ENSSLDG00000015805 ##18 ENSSLDG00000015787 ##22 NPFFR2 (ENSSLDG00000015760) SLC4A4 (ENSSLDG00000015570) dck (ENSSLDG00000015520) mob1bb (ENSSLDG00000015512) mrps2 (ENSSLDG00000015489) olfm1a (ENSSLDG00000015461) COL5A1 (ENSSLDG00000015379) FNBP1 (ENSSLDG00000015269) agpat2 (ENSSLDG00000015225) egfl7 (ENSSLDG00000015176) tor1 (ENSSLDG00000015158) tor1 (ENSSLDG00000015142) tor1 (ENSSLDG00000015126) nsa2 (ENSSLDG00000015100) gfm2 (ENSSLDG00000014952) Barramundi perch MODERN SPECIES nr4a1 (ENSLCAG00010022294) ENSLCAG00010022292 letmd1 (ENSLCAG00010022279) cd63 (ENSLCAG00010022267) nemp1 (ENSLCAG00010022257) ormdl2 (ENSLCAG00010022248) ENSLCAG00010022243 PAN2 (ENSLCAG00010022228) rtknb (ENSLCAG00010022215) ENSLCAG00010022211 dab2 (ENSLCAG00010022206) c9 (ENSLCAG00010022204) gas1b (ENSLCAG00010022199) fbp1b (ENSLCAG00010022190) ENSLCAG00010022179 ##18 ENSLCAG00010022172 ##22 NPFFR2 (ENSLCAG00010022165) SLC4A4 (ENSLCAG00010021674) dck (ENSLCAG00010021576) mob1bb (ENSLCAG00010021563) TNPO1 (ENSLCAG00010021272) fcho2 (ENSLCAG00010021128) TMEM174 (ENSLCAG00010021040) foxd1 (ENSLCAG00010021037) btf3 (ENSLCAG00010021025) ankra2 (ENSLCAG00010021015) ARHGEF28 (ENSLCAG00010021010) ENC1 (ENSLCAG00010021005) hexb (ENSLCAG00010020934) gfm2 (ENSLCAG00010020737) nsa2 (ENSLCAG00010020661) Anabantaria ANCESTRAL SPECIES 12 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Zig-zag eel MODERN SPECIES 3 SREK1 (ENSMAMG00000025104) erbin (ENSMAMG00000002991) ENSMAMG00000002497 SGTB (ENSMAMG00000002490) trappc13 (ENSMAMG00000002389) ENSMAMG00000002370 ENSMAMG00000002304 ENSMAMG00000002268 ENSMAMG00000002233 ENSMAMG00000002156 dab2 (ENSMAMG00000002109) ENSMAMG00000002066 gas1b (ENSMAMG00000002059) ENSMAMG00000026424 ENSMAMG00000001960 ##18 ENSMAMG00000001936 ##22 NPFFR2 (ENSMAMG00000001663) SLC4A4 (ENSMAMG00000001527) DCK (ENSMAMG00000001492) mob1bb (ENSMAMG00000025274) TNPO1 (ENSMAMG00000001357) fcho2 (ENSMAMG00000001025) TMEM174 (ENSMAMG00000000976) foxd1 (ENSMAMG00000000953) btf3 (ENSMAMG00000028335) ankra2 (ENSMAMG00000000896) ARHGEF28 (ENSMAMG00000000680) ENC1 (ENSMAMG00000000656) hexb (ENSMAMG00000000591) gfm2 (ENSMAMG00000000452) NSA2 (ENSMAMG00000025113) Anabantoidei ANCESTRAL SPECIES 16 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Climbing perch MODERN SPECIES 3 ENSATEG00000030037 erbin (ENSATEG00000009494) nln (ENSATEG00000009578) sgtb (ENSATEG00000009629) trappc13 (ENSATEG00000009691) ENSATEG00000009764 ENSATEG00000009792 arid6 (ENSATEG00000009889) ENSATEG00000009913 ENSATEG00000009956 dab2 (ENSATEG00000009992) ENSATEG00000010002 gas1b (ENSATEG00000010026) ENSATEG00000010039 ENSATEG00000010080 ##18 ENSATEG00000010200 ##22 NPFFR2 (ENSATEG00000028711) SLC4A4 (ENSATEG00000010257) DCK (ENSATEG00000010355) mob1bb (ENSATEG00000010361) TNPO1 (ENSATEG00000010408) fcho2 (ENSATEG00000010522) foxd1 (ENSATEG00000010611) btf3 (ENSATEG00000010619) ankra2 (ENSATEG00000010640) ARHGEF28 (ENSATEG00000010673) ENC1 (ENSATEG00000010768) hexb (ENSATEG00000010779) gfm2 (ENSATEG00000010821) NSA2 (ENSATEG00000010924) ENSATEG00000010982 Siamese fighting fish MODERN SPECIES 3 ENSBSLG00000020611 erbin (ENSBSLG00000020314) nln (ENSBSLG00000020201) sgtb (ENSBSLG00000020192) trappc13 (ENSBSLG00000020142) tnfrsfa (ENSBSLG00000020126) unc5da (ENSBSLG00000020053) ENSBSLG00000020043 rtknb (ENSBSLG00000020008) ENSBSLG00000019831 dab2 (ENSBSLG00000019784) c9 (ENSBSLG00000019536) gas1b (ENSBSLG00000019523) fbp1b (ENSBSLG00000019494) ENSBSLG00000019474 ##18 ENSBSLG00000019462 ##22 NPFFR2 (ENSBSLG00000019417) SLC4A4 (ENSBSLG00000018599) dck (ENSBSLG00000018568) mob1bb (ENSBSLG00000018553) TNPO1 (ENSBSLG00000017922) fcho2 (ENSBSLG00000017359) TMEM174 (ENSBSLG00000017293) foxd1 (ENSBSLG00000017286) btf3 (ENSBSLG00000017215) ankra2 (ENSBSLG00000017046) ARHGEF28 (ENSBSLG00000016710) ENC1 (ENSBSLG00000016048) hexb (ENSBSLG00000014718) gfm2 (ENSBSLG00000014536) nsa2 (ENSBSLG00000014530) Eupercaria ANCESTRAL SPECIES 13 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Tetraodontidae ANCESTRAL SPECIES 19 ENSGT00390000006980 ENSGT00530000064194 ENSGT00940000153294 ENSGT00940000158829 ENSGT00390000011980.b.b ENSGT00940000159362 ENSGT00940000164999 ENSGT00390000000529 ENSGT00390000009329 ENSGT00940000155897 ENSGT01050000244902.a.a.a.a.a.a ENSGT00390000017462 ENSGT00940000158865 ENSGT00390000013846.a.a ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e Fugu MODERN SPECIES 18 surf6 (ENSTRUG00000023872) surf1 (ENSTRUG00000025293) RPL7A (ENSTRUG00000018399) usp20 (ENSTRUG00000018404) ptges (ENSTRUG00000020670) garnl3 (ENSTRUG00000018417) ENSTRUG00000018423 cacfd1 (ENSTRUG00000033138) ptcd2 (ENSTRUG00000018429) MAP1B (ENSTRUG00000018435) ptger4b (ENSTRUG00000028946) ttc33 (ENSTRUG00000018440) prkaa1 (ENSTRUG00000018441) aif1l (ENSTRUG00000020405) ENSTRUG00000032548 ##18 ENSTRUG00000028567 ##22 npffr-2 (ENSTRUG00000018455) SLC4A4 (ENSTRUG00000018460) dck (ENSTRUG00000031783) mob1bb (ENSTRUG00000018489) fcho2 (ENSTRUG00000018494) foxd1 (ENSTRUG00000018503) btf3 (ENSTRUG00000023038) ankra2 (ENSTRUG00000018506) ARHGEF28 (ENSTRUG00000018508) ENC1 (ENSTRUG00000018509) hexb (ENSTRUG00000018510) nsa2 (ENSTRUG00000025113) tor1 (ENSTRUG00000024523) tor1 (ENSTRUG00000018521) tor1 (ENSTRUG00000024655) Tetraodon MODERN SPECIES 19 kyat1 (ENSTNIG00000007504) surf1 (ENSTNIG00000007502) rpl7a (ENSTNIG00000007501) usp20 (ENSTNIG00000007500) ptges (ENSTNIG00000007499) garnl3 (ENSTNIG00000007498) ENSTNIG00000007497 CACFD1 (ENSTNIG00000007496) ptcd2 (ENSTNIG00000007495) MAP1B (ENSTNIG00000007494) ptger4b (ENSTNIG00000007493) ttc33 (ENSTNIG00000007492) prkaa1 (ENSTNIG00000007491) aif1l (ENSTNIG00000007490) ENSTNIG00000007489 ##18 ENSTNIG00000007488 ##22 NPFFR2 (ENSTNIG00000007487) SLC4A4 (ENSTNIG00000007486) dck (ENSTNIG00000007485) mob1bb (ENSTNIG00000007484) TNPO1 (ENSTNIG00000007483) fcho2 (ENSTNIG00000006689) foxd1 (ENSTNIG00000013433) btf3 (ENSTNIG00000013434) ankra2 (ENSTNIG00000013435) ENSTNIG00000013436 hexb (ENSTNIG00000013437) gfm2 (ENSTNIG00000013438) nsa2 (ENSTNIG00000013439) tor1 (ENSTNIG00000013440) egfl7 (ENSTNIG00000013441) Eupecaria_A ANCESTRAL SPECIES 14 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Ballan wrasse DUPLICATION Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 811 ENSLBEG00000008965 ##22 NPFFR2 (ENSLBEG00000009012) SLC4A4 (ENSLBEG00000009188) dck (ENSLBEG00000009481) mob1bb (ENSLBEG00000009495) ENSLBEG00000009521 Ballan wrasse MODERN SPECIES 563 aqp3b (ENSLBEG00000016690) arid6 (ENSLBEG00000016717) ENSLBEG00000016740 zgc:162472 (ENSLBEG00000016770) dab2 (ENSLBEG00000016811) c9 (ENSLBEG00000016836) gas1b (ENSLBEG00000016864) fbp1b (ENSLBEG00000016889) ENSLBEG00000016939 ENSLBEG00000016966 ##18 ENSLBEG00000016989 ##18 ENSLBEG00000017062 ##22 Ballan wrasse MODERN SPECIES 1468 ENSLBEG00000009619 ##18 ENSLBEG00000009599 ##22 Eupecaria_B ANCESTRAL SPECIES 14 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Eupecaria_C ANCESTRAL SPECIES 9 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Gilthead seabream MODERN SPECIES 3 sgtb (ENSSAUG00010019446) trappc13 (ENSSAUG00010019462) CYB561A3 (ENSSAUG00010019465) tnfrsfa (ENSSAUG00010019490) unc5da (ENSSAUG00010019508) aqp3b (ENSSAUG00010020180) arid6 (ENSSAUG00010020182) rtknb (ENSSAUG00010020183) ENSSAUG00010020184 dab2 (ENSSAUG00010020188) c9 (ENSSAUG00010020191) ENSSAUG00010010124 gas1b (ENSSAUG00010010125) fbp1b (ENSSAUG00010010126) ENSSAUG00010010129 ##18 ENSSAUG00010010132 ##22 NPFFR2 (ENSSAUG00010010136) SLC4A4 (ENSSAUG00010010148) dck (ENSSAUG00010010725) mob1bb (ENSSAUG00010010730) TNPO1 (ENSSAUG00010010779) fcho2 (ENSSAUG00010013016) TMEM174 (ENSSAUG00010013732) foxd1 (ENSSAUG00010013733) btf3 (ENSSAUG00010013734) ankra2 (ENSSAUG00010013735) ARHGEF28 (ENSSAUG00010013738) ENC1 (ENSSAUG00010013742) hexb (ENSSAUG00010013757) gfm2 (ENSSAUG00010013860) nsa2 (ENSSAUG00010015274) Eupercaria_incertae_sedis ANCESTRAL SPECIES 6 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Large yellow croaker MODERN SPECIES 4 sgtb (ENSLCRG00005015344) trappc13 (ENSLCRG00005015347) ENSLCRG00005015361 ENSLCRG00005015364 tnfrsfa (ENSLCRG00005015367) unc5da (ENSLCRG00005015389) aqp3b (ENSLCRG00005016462) arid6 (ENSLCRG00005016464) ENSLCRG00005016467 ENSLCRG00005016474 dab2 (ENSLCRG00005016480) c9 (ENSLCRG00005016489) gas1b (ENSLCRG00005016493) fbp1b (ENSLCRG00005016496) ENSLCRG00005016497 ##18 ENSLCRG00005016499 ##22 NPFFR2 (ENSLCRG00005016500) ENSLCRG00005016501 lrrc8aa (ENSLCRG00005016502) phyhd1 (ENSLCRG00005016503) dolk (ENSLCRG00005016504) NUP188 (ENSLCRG00005016511) ENSLCRG00005017715 B3GALT9 (ENSLCRG00005017749) psmd5 (ENSLCRG00005017758) KCNT1 (ENSLCRG00005017821) camsap1a (ENSLCRG00005017883) notch1a (ENSLCRG00005018363) ENSLCRG00005019752 ENSLCRG00005019853 rpl28 (ENSLCRG00005019856) European seabass MODERN SPECIES 9 nln (ENSDLAG00005010170) sgtb (ENSDLAG00005011075) trappc13 (ENSDLAG00005011087) ENSDLAG00005011101 tnfrsfa (ENSDLAG00005011154) unc5da (ENSDLAG00005011198) aqp3b (ENSDLAG00005011761) ENSDLAG00005011777 arid6 (ENSDLAG00005031340) ENSDLAG00005011792 ENSDLAG00005011817 dab2 (ENSDLAG00005011851) ENSDLAG00005011878 gas1b (ENSDLAG00005011889) ENSDLAG00005011901 ENSDLAG00005011969 ##22 NPFFR2 (ENSDLAG00005011980) SLC4A4 (ENSDLAG00005012024) DCK (ENSDLAG00005015518) mob1bb (ENSDLAG00005001255) TNPO1 (ENSDLAG00005015570) fcho2 (ENSDLAG00005016468) TMEM174 (ENSDLAG00005017336) foxd1 (ENSDLAG00005029808) btf3 (ENSDLAG00005006186) ankra2 (ENSDLAG00005017531) ARHGEF28 (ENSDLAG00005017354) ENC1 (ENSDLAG00005017634) hexb (ENSDLAG00005017654) gfm2 (ENSDLAG00005018401) NSA2 (ENSDLAG00005019422) Perciformes ANCESTRAL SPECIES 16 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT01040000244713 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Cottioidei ANCESTRAL SPECIES 18 ENSGT00940000157140.b.a.b.b ENSGT00940000157105 ENSGT00940000155389 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00390000015280 ENSGT00940000158321 ENSGT00950000183171.A.b.a.a ENSGT00940000159526 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e ENSGT00940000160015 Stickleback MODERN SPECIES 13 fcho2 (ENSGACG00000015839) TNPO1 (ENSGACG00000015841) CYB561A3 (ENSGACG00000015842) tnfrsfa (ENSGACG00000015843) unc5da (ENSGACG00000015844) ENSGACG00000015846 RTKN (ENSGACG00000015847) ENSGACG00000015848 ENSGACG00000015849 ENSGACG00000015851 zgc:162472 (ENSGACG00000015852) dab2 (ENSGACG00000015854) c9 (ENSGACG00000015856) fbp1b (ENSGACG00000015857) ENSGACG00000015859 ##18 ENSGACG00000015860 ##22 NPFFR2 (ENSGACG00000015862) SLC4A4 (ENSGACG00000015864) dck (ENSGACG00000015866) mob1bb (ENSGACG00000015867) trappc13 (ENSGACG00000015870) sgtb (ENSGACG00000015874) nln (ENSGACG00000015881) erbin (ENSGACG00000015884) ENC1 (ENSGACG00000015886) hexb (ENSGACG00000015887) gfm2 (ENSGACG00000015889) nsa2 (ENSGACG00000015892) tor1 (ENSGACG00000015894) egfl7 (ENSGACG00000015896) agpat2 (ENSGACG00000015898) Lumpfish MODERN SPECIES 3 ddx55 (ENSCLMG00005015676) eif2b1 (ENSCLMG00005015650) bcl7a (ENSCLMG00005015649) ENSCLMG00005015642 ENSCLMG00005015641 denr (ENSCLMG00005015637) ENSCLMG00005015636 HIP1R (ENSCLMG00005015629) zgc:162472 (ENSCLMG00005015624) ENSCLMG00005015622 dab2 (ENSCLMG00005015621) ENSCLMG00005015561 gas1b (ENSCLMG00005015560) fbp1b (ENSCLMG00005015558) ENSCLMG00005015547 ##18 ENSCLMG00005015542 ##22 NPFFR2 (ENSCLMG00005015541) SLC4A4 (ENSCLMG00005014467) dck (ENSCLMG00005014459) mob1bb (ENSCLMG00005014457) trappc13 (ENSCLMG00005014437) sgtb (ENSCLMG00005014432) nln (ENSCLMG00005013946) ARHGEF28 (ENSCLMG00005013941) ENC1 (ENSCLMG00005013939) ENSCLMG00005013937 ENSCLMG00005013936 ENSCLMG00005013935 ENSCLMG00005013934 ENSCLMG00005013933 ENSCLMG00005013931 Perciformes_a ANCESTRAL SPECIES 12 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT01040000244713 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Channel bull blenny MODERN SPECIES 3 nln (ENSCGOG00000021092) sgtb (ENSCGOG00000022013) trappc13 (ENSCGOG00000022016) ENSCGOG00000022018 tnfrsfa (ENSCGOG00000022021) unc5da (ENSCGOG00000022038) aqp3b (ENSCGOG00000022328) rtknb (ENSCGOG00000022444) ENSCGOG00000022450 dab2 (ENSCGOG00000022454) c9 (ENSCGOG00000022457) gas1b (ENSCGOG00000022479) fbp1b (ENSCGOG00000022483) ENSCGOG00000022505 ##18 ENSCGOG00000022507 ##18 ENSCGOG00000022508 ##22 NPFFR2 (ENSCGOG00000022515) SLC4A4 (ENSCGOG00000022658) dck (ENSCGOG00000023978) mob1bb (ENSCGOG00000023990) TNPO1 (ENSCGOG00000023998) fcho2 (ENSCGOG00000024058) ENSCGOG00000024118 foxd1 (ENSCGOG00000004064) btf3 (ENSCGOG00000004085) ankra2 (ENSCGOG00000004121) ARHGEF28 (ENSCGOG00000004149) ENC1 (ENSCGOG00000004176) hexb (ENSCGOG00000004228) gfm2 (ENSCGOG00000005289) nsa2 (ENSCGOG00000005397) Pike perch MODERN SPECIES 33 erbin (ENSSLUG00000007087) nln (ENSSLUG00000002710) sgtb (ENSSLUG00000002567) trappc13 (ENSSLUG00000002466) ENSSLUG00000002434 tnfrsfa (ENSSLUG00000002418) aqp3b (ENSSLUG00000001825) arid6 (ENSSLUG00000001692) RTKN (ENSSLUG00000001682) zgc:162472 (ENSSLUG00000001668) dab2 (ENSSLUG00000001654) c9 (ENSSLUG00000001632) gas1b (ENSSLUG00000001595) fbp1b (ENSSLUG00000001585) ENSSLUG00000001570 ##18 ENSSLUG00000025464 ##22 NPFFR2 (ENSSLUG00000025461) SLC4A4 (ENSSLUG00000024801) dck (ENSSLUG00000024643) mob1bb (ENSSLUG00000024630) TNPO1 (ENSSLUG00000024422) fcho2 (ENSSLUG00000024230) foxd1 (ENSSLUG00000024212) btf3 (ENSSLUG00000024208) ankra2 (ENSSLUG00000024202) ARHGEF28 (ENSSLUG00000024179) ENC1 (ENSSLUG00000024173) hexb (ENSSLUG00000023865) gfm2 (ENSSLUG00000023617) nsa2 (ENSSLUG00000023585) tor1 (ENSSLUG00000023578) Ovalentaria ANCESTRAL SPECIES 16 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Atherinomorphae ANCESTRAL SPECIES 17 ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Oryzias ANCESTRAL SPECIES 9 ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ENSGT00940000157156.m ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Oryzias_b ANCESTRAL SPECIES 4 ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ENSGT00940000157156.m ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Javanese ricefish MODERN SPECIES 3 erbin (ENSOJAG00000018954) nln (ENSOJAG00000018811) sgtb (ENSOJAG00000018781) trappc13 (ENSOJAG00000018466) CYB561A3 (ENSOJAG00000018283) tnfrsfa (ENSOJAG00000018269) unc5da (ENSOJAG00000017639) ENSOJAG00000017553 RTKN (ENSOJAG00000017517) ENSOJAG00000017494 dab2 (ENSOJAG00000017484) c9 (ENSOJAG00000017310) gas1b (ENSOJAG00000017286) fbp1b (ENSOJAG00000017269) ENSOJAG00000017260 ##18 ENSOJAG00000017235 ##22 NPFFR2 (ENSOJAG00000017219) SLC4A4 (ENSOJAG00000014859) dck (ENSOJAG00000014618) mob1bb (ENSOJAG00000014572) TNPO1 (ENSOJAG00000013577) fcho2 (ENSOJAG00000013199) TMEM174 (ENSOJAG00000013157) foxd1 (ENSOJAG00000013148) btf3 (ENSOJAG00000013079) ankra2 (ENSOJAG00000013011) ARHGEF28 (ENSOJAG00000012916) ENC1 (ENSOJAG00000012890) ENSOJAG00000012801 nsa2 (ENSOJAG00000012785) tor1 (ENSOJAG00000012776) Indian medaka MODERN SPECIES 30 nln (ENSOMEG00000015484) sgtb (ENSOMEG00000015444) trappc13 (ENSOMEG00000015401) CYB561A3 (ENSOMEG00000015344) tnfrsfa (ENSOMEG00000015324) unc5da (ENSOMEG00000015293) ENSOMEG00000015256 RTKN (ENSOMEG00000015232) ENSOMEG00000015202 ENSOMEG00000015113 ENSOMEG00000015096 c9 (ENSOMEG00000015074) gas1b (ENSOMEG00000015018) fbp1b (ENSOMEG00000015002) ENSOMEG00000014975 ##18 ENSOMEG00000014942 ##22 NPFFR2 (ENSOMEG00000014930) SLC4A4 (ENSOMEG00000014851) dck (ENSOMEG00000014621) mob1bb (ENSOMEG00000014587) TNPO1 (ENSOMEG00000014567) fcho2 (ENSOMEG00000014430) TMEM174 (ENSOMEG00000014273) btf3 (ENSOMEG00000014241) foxd1 (ENSOMEG00000014209) ankra2 (ENSOMEG00000014199) ARHGEF28 (ENSOMEG00000014109) ENC1 (ENSOMEG00000013923) hexb (ENSOMEG00000013880) gfm2 (ENSOMEG00000013774) nsa2 (ENSOMEG00000013689) Oryzias_a ANCESTRAL SPECIES 12 ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000157156.m ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e.l Chinese medaka MODERN SPECIES 1345 ENSOSIG00000011651 purbb (ENSOSIG00000011660) ENSOSIG00000011661 ENSOSIG00000011662 dapk1 (ENSOSIG00000011665) fbp1a (ENSOSIG00000012190) dmrt1 (ENSOSIG00000012192) #19 dmrt3a (ENSOSIG00000012194) #20 dmrt2a (ENSOSIG00000012195) #21 ENSOSIG00000012196 ##22 Japanese Medaka HdrR MODERN SPECIES 3 nln (ENSORLG00000002770) sgtb (ENSORLG00000002822) trappc13 (ENSORLG00000002871) ENSORLG00000025728 tnfrsfa (ENSORLG00000027902) unc5da (ENSORLG00000002892) ENSORLG00000028330 ENSORLG00000030129 ENSORLG00000002897 ENSORLG00000002905 dab2 (ENSORLG00000002936) c9 (ENSORLG00000002961) gas1b (ENSORLG00000002967) fbp1b (ENSORLG00000002997) ENSORLG00000003024 ##18 ENSORLG00000003038 ##22 NPFFR2 (ENSORLG00000003050) SLC4A4 (ENSORLG00000003072) dck (ENSORLG00000003108) mob1bb (ENSORLG00000003125) TNPO1 (ENSORLG00000003182) fcho2 (ENSORLG00000003234) TMEM174 (ENSORLG00000003242) btf3 (ENSORLG00000003257) ENSORLG00000022026 ankra2 (ENSORLG00000003277) ARHGEF28 (ENSORLG00000028035) ENC1 (ENSORLG00000003288) hexb (ENSORLG00000003323) gfm2 (ENSORLG00000003360) nsa2 (ENSORLG00000003379) Cyprinodontiformes ANCESTRAL SPECIES 16 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Aplocheiloidei ANCESTRAL SPECIES 5 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.a ENSGT00940000157156.o ENSGT00940000157156.p ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f Turquoise killifish MODERN SPECIES 1611 nln (ENSNFUG00015006302) SGTA (ENSNFUG00015006671) TNFRSFA (ENSNFUG00015006697) unc5da (ENSNFUG00015007035) ENSNFUG00015007911 ENSNFUG00015007914 arid6 (ENSNFUG00015007916) ENSNFUG00015007931 BDP1 (ENSNFUG00015007976) dab2 (ENSNFUG00015008001) c9 (ENSNFUG00015008008) gas1b (ENSNFUG00015008028) fbp1b (ENSNFUG00015008032) ENSNFUG00015008039 ENSNFUG00015008047 ##18 ENSNFUG00015008060 ##22 SYT6 (ENSNFUG00015008073) OLFML3A (ENSNFUG00015008080) FAM132A (ENSNFUG00015008086) SDF4 (ENSNFUG00015008093) ACAP3 (ENSNFUG00015008239) ankra2 (ENSNFUG00015012221) BTF3 (ENSNFUG00015012229) foxd1 (ENSNFUG00015012247) PTGER4B (ENSNFUG00015012249) TTC33 (ENSNFUG00015012257) prkaa1 (ENSNFUG00015012276) aif1l (ENSNFUG00015012643) LAMC3 (ENSNFUG00015012709) FIBCD1 (ENSNFUG00015013129) ENSNFUG00015013135 Mangrove rivulus MODERN SPECIES 102 ENSKMAG00000017101 ENSKMAG00000017111 erbin (ENSKMAG00000017154) nln (ENSKMAG00000017321) sgtb (ENSKMAG00000017364) trappc13 (ENSKMAG00000017394) tnfrsfa (ENSKMAG00000017461) unc5da (ENSKMAG00000017494) arid6 (ENSKMAG00000017569) RTKN (ENSKMAG00000017598) zgc:162472 (ENSKMAG00000017638) ENSKMAG00000017697 c9 (ENSKMAG00000017710) fbp1b (ENSKMAG00000017739) ENSKMAG00000017782 ##18 ENSKMAG00000017820 ##22 NPFFR2 (ENSKMAG00000017850) SLC4A4 (ENSKMAG00000017983) dck (ENSKMAG00000018136) mob1bb (ENSKMAG00000018161) TNPO1 (ENSKMAG00000018195) fcho2 (ENSKMAG00000018280) TMEM174 (ENSKMAG00000018332) foxd1 (ENSKMAG00000018342) ENSKMAG00000018351 btf3 (ENSKMAG00000018370) ankra2 (ENSKMAG00000018409) ARHGEF28 (ENSKMAG00000018447) ENSKMAG00000018534 ENSKMAG00000018548 Cyprinodontoidei ANCESTRAL SPECIES 16 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Poeciliinae ANCESTRAL SPECIES 12 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Poecilia ANCESTRAL SPECIES 12 ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000168653.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT00940000163467.a.a.b.f.a.b.b ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f Guppy MODERN SPECIES 442 nln (ENSPREG00000020102) sgtb (ENSPREG00000020144) ENSPREG00000020168 trappc13 (ENSPREG00000020181) ENSPREG00000020216 tnfrsfa (ENSPREG00000020231) unc5da (ENSPREG00000020252) ENSPREG00000020281 ENSPREG00000020329 rtknb (ENSPREG00000020445) ENSPREG00000020470 ENSPREG00000020482 gas1b (ENSPREG00000020499) fbp1b (ENSPREG00000020518) ENSPREG00000020548 ##18 ENSPREG00000020562 ##22 ENSPREG00000020568 NPFFR2 (ENSPREG00000020572) SLC4A4 (ENSPREG00000020602) dck (ENSPREG00000020678) mob1bb (ENSPREG00000020689) TNPO1 (ENSPREG00000020705) fcho2 (ENSPREG00000020776) TMEM174 (ENSPREG00000020871) foxd1 (ENSPREG00000020886) btf3 (ENSPREG00000020894) ankra2 (ENSPREG00000020906) ENSPREG00000020919 ENSPREG00000020933 ENC1 (ENSPREG00000020971) hexb (ENSPREG00000020991) NAME_6 ANCESTRAL SPECIES 13 ENSGT00940000155123.b.b ENSGT00940000155305.b.b.c ENSGT00940000159721.h.a ENSGT00390000015280 ENSGT00940000168653.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT00940000163467.a.a.b.f.a.b.b ENSGT01070000253744.b.b.f ENSGT00940000156290.b.a ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Sailfin molly MODERN SPECIES 1529 rtknb (ENSPLAG00000016330) ENSPLAG00000016312 dab2 (ENSPLAG00000016287) ENSPLAG00000016279 gas1b (ENSPLAG00000016249) fbp1b (ENSPLAG00000016241) ENSPLAG00000016227 ##18 ENSPLAG00000016215 ##22 ENSPLAG00000016184 Platyfish MODERN SPECIES 22 erbin (ENSXMAG00000014384) nln (ENSXMAG00000028969) sgtb (ENSXMAG00000026160) trappc13 (ENSXMAG00000028954) tnfrsfa (ENSXMAG00000022145) unc5da (ENSXMAG00000005223) ENSXMAG00000025298 arid6 (ENSXMAG00000011937) ENSXMAG00000022887 ENSXMAG00000021414 dab2 (ENSXMAG00000005287) c9 (ENSXMAG00000005297) gas1b (ENSXMAG00000020027) fbp1b (ENSXMAG00000005310) ENSXMAG00000005324 ##18 ENSXMAG00000025366 ##22 NPFFR2 (ENSXMAG00000026051) SLC4A4 (ENSXMAG00000005345) dck (ENSXMAG00000005412) mob1bb (ENSXMAG00000005427) TNPO1 (ENSXMAG00000005440) fcho2 (ENSXMAG00000005481) TMEM174 (ENSXMAG00000024151) foxd1 (ENSXMAG00000009102) btf3 (ENSXMAG00000009089) ankra2 (ENSXMAG00000009076) ARHGEF28 (ENSXMAG00000014765) ENC1 (ENSXMAG00000023069) hexb (ENSXMAG00000000795) gfm2 (ENSXMAG00000000772) nsa2 (ENSXMAG00000000762) NAME_4 ANCESTRAL SPECIES ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Mummichog MODERN SPECIES 521 ENSFHEG00000019772 rtknb (ENSFHEG00000019765) zgc:162472 (ENSFHEG00000019755) dab2 (ENSFHEG00000019746) c9 (ENSFHEG00000019720) ENSFHEG00000019715 gas1b (ENSFHEG00000019708) fbp1b (ENSFHEG00000019689) ENSFHEG00000019660 ##18 ENSFHEG00000019636 ##22 NPFFR2 (ENSFHEG00000019633) SLC4A4 (ENSFHEG00000019596) dck (ENSFHEG00000019303) mob1bb (ENSFHEG00000019291) TNPO1 (ENSFHEG00000019234) Sheepshead minnow MODERN SPECIES 532 gas1b (ENSCVAG00000023343) c9 (ENSCVAG00000023342) dab2 (ENSCVAG00000023341) fbp1b (ENSCVAG00000023340) ENSCVAG00000023339 ##18 ENSCVAG00000023338 ##22 NPFFR2 (ENSCVAG00000000039) SLC4A4 (ENSCVAG00000001007) dck (ENSCVAG00000001008) mob1bb (ENSCVAG00000001009) TNPO1 (ENSCVAG00000001010) fcho2 (ENSCVAG00000001011) TMEM174 (ENSCVAG00000001012) foxd1 (ENSCVAG00000001013) ENSCVAG00000001014 ankra2 (ENSCVAG00000001015) ENSCVAG00000001016 Ovalentaria_B ANCESTRAL SPECIES 14 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Pomacentridae ANCESTRAL SPECIES 12 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Pomacentridae_A ANCESTRAL SPECIES 10 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Amphiprion ANCESTRAL SPECIES 5 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00950000183197.b.a.b ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000157242.a.b ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00390000004161 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Clown anemonefish MODERN SPECIES 587 arid6 (ENSAOCG00000000495) rtknb (ENSAOCG00000008456) ENSAOCG00000008426 dab2 (ENSAOCG00000008396) c9 (ENSAOCG00000008363) gas1b (ENSAOCG00000002385) fbp1b (ENSAOCG00000008349) ENSAOCG00000008324 ##18 ENSAOCG00000008313 ##22 NPFFR2 (ENSAOCG00000008303) SLC4A4 (ENSAOCG00000008279) dck (ENSAOCG00000008197) mob1bb (ENSAOCG00000008183) TNPO1 (ENSAOCG00000008154) fcho2 (ENSAOCG00000008050) TMEM174 (ENSAOCG00000007953) foxd1 (ENSAOCG00000007950) btf3 (ENSAOCG00000002477) ankra2 (ENSAOCG00000007921) ARHGEF28 (ENSAOCG00000007892) Orange clownfish MODERN SPECIES 7 nln (ENSAPEG00000002016) sgtb (ENSAPEG00000001969) trappc13 (ENSAPEG00000001893) ENSAPEG00000001853 tnfrsfa (ENSAPEG00000001812) unc5da (ENSAPEG00000001741) aqp3b (ENSAPEG00000001661) arid6 (ENSAPEG00000001595) rtknb (ENSAPEG00000001552) ENSAPEG00000001544 dab2 (ENSAPEG00000001533) c9 (ENSAPEG00000001520) gas1b (ENSAPEG00000001511) fbp1b (ENSAPEG00000001478) ENSAPEG00000001466 ##18 ENSAPEG00000001459 ##22 NPFFR2 (ENSAPEG00000001373) SLC4A4 (ENSAPEG00000001234) dck (ENSAPEG00000001210) mob1bb (ENSAPEG00000001183) TNPO1 (ENSAPEG00000001112) fcho2 (ENSAPEG00000000982) TMEM174 (ENSAPEG00000000954) ENSAPEG00000000952 foxd1 (ENSAPEG00000000936) btf3 (ENSAPEG00000000915) ankra2 (ENSAPEG00000000895) ARHGEF28 (ENSAPEG00000000716) ENC1 (ENSAPEG00000000639) hexb (ENSAPEG00000000545) gfm2 (ENSAPEG00000000424) Spiny chromis MODERN SPECIES 109 sgtb (ENSAPOG00000024028) trappc13 (ENSAPOG00000024099) ENSAPOG00000024173 tnfrsfa (ENSAPOG00000002817) unc5da (ENSAPOG00000002879) aqp3b (ENSAPOG00000002912) ENSAPOG00000002930 rtknb (ENSAPOG00000002957) ENSAPOG00000003020 dab2 (ENSAPOG00000003052) c9 (ENSAPOG00000003104) gas1b (ENSAPOG00000003119) fbp1b (ENSAPOG00000003160) ENSAPOG00000003181 ##18 ENSAPOG00000003198 ##18 ENSAPOG00000003210 ##22 NPFFR2 (ENSAPOG00000003236) SLC4A4 (ENSAPOG00000003350) dck (ENSAPOG00000003386) mob1bb (ENSAPOG00000003391) TNPO1 (ENSAPOG00000003453) fcho2 (ENSAPOG00000003579) Bicolor damselfish MODERN SPECIES 302 nln (ENSSPAG00000022332) sgtb (ENSSPAG00000022347) trappc13 (ENSSPAG00000022361) CYB561A3 (ENSSPAG00000022379) tnfrsfa (ENSSPAG00000022412) unc5da (ENSSPAG00000022427) aqp3b (ENSSPAG00000022438) arid6 (ENSSPAG00000022443) rtknb (ENSSPAG00000022450) ENSSPAG00000022464 dab2 (ENSSPAG00000022490) c9 (ENSSPAG00000022506) gas1b (ENSSPAG00000022517) fbp1b (ENSSPAG00000022524) ENSSPAG00000022534 ##18 ENSSPAG00000022545 ##22 NPFFR2 (ENSSPAG00000000138) SLC4A4 (ENSSPAG00000000164) dck (ENSSPAG00000000235) mob1bb (ENSSPAG00000000247) TNPO1 (ENSSPAG00000000258) fcho2 (ENSSPAG00000000340) TMEM174 (ENSSPAG00000000453) foxd1 (ENSSPAG00000000463) btf3 (ENSSPAG00000000473) ankra2 (ENSSPAG00000000508) Cichlidae ANCESTRAL SPECIES 10 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000153288.a.b.a.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Midas cichlid MODERN SPECIES 1127 erbin (ENSACIG00000004392) nln (ENSACIG00000004338) sgtb (ENSACIG00000004323) trappc13 (ENSACIG00000004277) tnfrsfa (ENSACIG00000004242) unc5da (ENSACIG00000004192) ENSACIG00000004174 RTKN (ENSACIG00000004147) dab2 (ENSACIG00000004099) c9 (ENSACIG00000004070) gas1b (ENSACIG00000004058) fbp1b (ENSACIG00000004034) ENSACIG00000004021 ##18 ENSACIG00000004007 ##18 ENSACIG00000003896 ##22 NPFFR2 (ENSACIG00000003872) SLC4A4 (ENSACIG00000003815) dck (ENSACIG00000003784) mob1bb (ENSACIG00000003766) TNPO1 (ENSACIG00000003711) fcho2 (ENSACIG00000003668) foxd1 (ENSACIG00000003660) btf3 (ENSACIG00000003624) ankra2 (ENSACIG00000003574) ARHGEF28 (ENSACIG00000003427) nsa2 (ENSACIG00000003390) gfm2 (ENSACIG00000003338) hexb (ENSACIG00000003138) tor1 (ENSACIG00000003085) egfl7 (ENSACIG00000003055) Pseudocrenilabrinae ANCESTRAL SPECIES ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000153288.a.b.a.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Pseudocrenilabrinae_A ANCESTRAL SPECIES ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000153288.a.b.a.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 Lyretail cichlid MODERN SPECIES 336 ENSNBRG00000010656 erbin (ENSNBRG00000010568) nln (ENSNBRG00000010517) sgtb (ENSNBRG00000010480) trappc13 (ENSNBRG00000010452) tnfrsfa (ENSNBRG00000010442) unc5da (ENSNBRG00000010398) ENSNBRG00000010381 rtknb (ENSNBRG00000010352) ENSNBRG00000010342 dab2 (ENSNBRG00000010297) c9 (ENSNBRG00000010281) gas1b (ENSNBRG00000010256) fbp1b (ENSNBRG00000010231) ENSNBRG00000010215 ##18 ENSNBRG00000010162 ##22 NPFFR2 (ENSNBRG00000010141) SLC4A4 (ENSNBRG00000010089) dck (ENSNBRG00000010072) mob1bb (ENSNBRG00000010053) TNPO1 (ENSNBRG00000009998) fcho2 (ENSNBRG00000009710) foxd1 (ENSNBRG00000009642) btf3 (ENSNBRG00000009623) ankra2 (ENSNBRG00000009594) ARHGEF28 (ENSNBRG00000009368) ENC1 (ENSNBRG00000009321) hexb (ENSNBRG00000009225) gfm2 (ENSNBRG00000009181) nsa2 (ENSNBRG00000009155) tor1 (ENSNBRG00000009136) Haplochromini ANCESTRAL SPECIES ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e Burton s mouthbrooder MODERN SPECIES 380 ENSHBUG00000007082 erbin (ENSHBUG00000007199) nln (ENSHBUG00000007267) sgtb (ENSHBUG00000007279) trappc13 (ENSHBUG00000007340) tnfrsfa (ENSHBUG00000007366) unc5da (ENSHBUG00000007420) arid6 (ENSHBUG00000007457) ENSHBUG00000007484 ENSHBUG00000007511 dab2 (ENSHBUG00000007523) c9 (ENSHBUG00000007545) gas1b (ENSHBUG00000007555) fbp1b (ENSHBUG00000007589) ENSHBUG00000007615 ##18 ENSHBUG00000007632 ##22 NPFFR2 (ENSHBUG00000007717) SLC4A4 (ENSHBUG00000007927) dck (ENSHBUG00000007962) mob1bb (ENSHBUG00000007993) TNPO1 (ENSHBUG00000008068) Haplochromini_A ANCESTRAL SPECIES 12 ENSGT00730000110872.a.tb ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e P. nyererei MODERN SPECIES 297 ENSPNYG00000007178 erbin (ENSPNYG00000007226) nln (ENSPNYG00000000653) sgtb (ENSPNYG00000000689) trappc13 (ENSPNYG00000000720) tnfrsfa (ENSPNYG00000000765) unc5da (ENSPNYG00000000772) arid6 (ENSPNYG00000000826) ENSPNYG00000000839 ENSPNYG00000000877 dab2 (ENSPNYG00000000886) c9 (ENSPNYG00000000896) gas1b (ENSPNYG00000000902) fbp1b (ENSPNYG00000000923) ENSPNYG00000000952 ##18 ENSPNYG00000000984 ##22 NPFFR2 (ENSPNYG00000001069) SLC4A4 (ENSPNYG00000001164) dck (ENSPNYG00000001253) mob1bb (ENSPNYG00000001509) TNPO1 (ENSPNYG00000001522) fcho2 (ENSPNYG00000001628) foxd1 (ENSPNYG00000001818) btf3 (ENSPNYG00000001828) ankra2 (ENSPNYG00000001843) ENSPNYG00000001882 ENC1 (ENSPNYG00000001928) hexb (ENSPNYG00000001935) gfm2 (ENSPNYG00000001950) nsa2 (ENSPNYG00000002028) tor1 (ENSPNYG00000002052) Haplochromini_B ANCESTRAL SPECIES 4 ENSGT00940000159526 ENSGT00950000183171.A.b.a.a ENSGT00940000158321 ENSGT00390000015280 ENSGT00940000165531.b.b ENSGT00950000182815.a.a.b.g ENSGT00940000163584.a ENSGT00940000158491.b ENSGT00390000012762 ENSGT00530000063460.B ENSGT00940000155567 ENSGT00940000159777 ENSGT00390000001195.a.b ENSGT00390000015513.a.b.b ENSGT00940000154886.a.b ##18 ENSGT00940000154821.a.a ##22 ENSGT01070000253744.b.b.f ENSGT00940000156290.b ENSGT00940000157321 ENSGT01050000244898.b.b ENSGT00940000155389 ENSGT00940000157105 ENSGT00940000157140.b.a.b.b ENSGT00940000153288.a.b.b ENSGT00940000157156 ENSGT00940000155831.cb ENSGT00950000182983.B.a.b.e ENSGT00390000008107.c.a ENSGT00550000074890.f ENSGT00390000018706 ENSGT00950000182888.a.a.a.e Zebra mbuna MODERN SPECIES 1110 ENSMZEG00005005707 erbin (ENSMZEG00005005646) nln (ENSMZEG00005005595) sgtb (ENSMZEG00005005575) trappc13 (ENSMZEG00005005498) tnfrsfa (ENSMZEG00005005481) unc5da (ENSMZEG00005005444) arid6 (ENSMZEG00005005417) ENSMZEG00005005382 ENSMZEG00005005322 dab2 (ENSMZEG00005005283) c9 (ENSMZEG00005005264) gas1b (ENSMZEG00005005253) fbp1b (ENSMZEG00005005220) ENSMZEG00005005187 ##18 ENSMZEG00005005173 ##22 NPFFR2 (ENSMZEG00005005088) SLC4A4 (ENSMZEG00005005012) dck (ENSMZEG00005004974) mob1bb (ENSMZEG00005004954) TNPO1 (ENSMZEG00005004913) fcho2 (ENSMZEG00005004754) foxd1 (ENSMZEG00005004712) btf3 (ENSMZEG00005004698) ankra2 (ENSMZEG00005004645) ENSMZEG00005004598 ENC1 (ENSMZEG00005004589) hexb (ENSMZEG00005004537) gfm2 (ENSMZEG00005004469) nsa2 (ENSMZEG00005004450) tor1 (ENSMZEG00005004445) Eastern happy MODERN SPECIES 19 erbin (ENSACLG00000026794) nln (ENSACLG00000026853) sgtb (ENSACLG00000026866) trappc13 (ENSACLG00000026883) tnfrsfa (ENSACLG00000026903) unc5da (ENSACLG00000026908) ENSACLG00000026923 ENSACLG00000026933 ENSACLG00000026939 ENSACLG00000026942 dab2 (ENSACLG00000026962) c9 (ENSACLG00000026996) gas1b (ENSACLG00000026998) fbp1b (ENSACLG00000027007) ENSACLG00000027025 ##18 ENSACLG00000027054 ##22 NPFFR2 (ENSACLG00000027070) SLC4A4 (ENSACLG00000027117) dck (ENSACLG00000027209) mob1bb (ENSACLG00000027216) TNPO1 (ENSACLG00000027223) fcho2 (ENSACLG00000027259) ENSACLG00000027336 foxd1 (ENSACLG00000027344) btf3 (ENSACLG00000027347) ankra2 (ENSACLG00000027357) ARHGEF28 (ENSACLG00000027367) ENC1 (ENSACLG00000027402) hexb (ENSACLG00000027420) gfm2 (ENSACLG00000027430) nsa2 (ENSACLG00000027450) Nile tilapia MODERN SPECIES 19 sgtb (ENSONIG00000011096) trappc13 (ENSONIG00000011099) tnfrsfa (ENSONIG00000011105) unc5da (ENSONIG00000011108) ENSONIG00000034982 c9 (ENSONIG00000011123) ENSONIG00000028728 ENSONIG00000028348 arid6 (ENSONIG00000032243) ENSONIG00000011115 ENSONIG00000024626 dab2 (ENSONIG00000011119) GAS1 (ENSONIG00000020508) fbp1b (ENSONIG00000011126) ENSONIG00000011130 ##18 ENSONIG00000011135 ##22 NPFFR2 (ENSONIG00000011136) SLC4A4 (ENSONIG00000011138) dck (ENSONIG00000011146) mob1bb (ENSONIG00000011150) TNPO1 (ENSONIG00000011151) fcho2 (ENSONIG00000011160) ENSONIG00000040457 foxd1 (ENSONIG00000020510) btf3 (ENSONIG00000011166) ankra2 (ENSONIG00000037402) ARHGEF28 (ENSONIG00000011175) ENC1 (ENSONIG00000020511) hexb (ENSONIG00000011177) gfm2 (ENSONIG00000011183) nsa2 (ENSONIG00000011188) Euteleostomi ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Sarcopterygii ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Tetrapoda ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Amniota ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Mammalia ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Theria ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Eutheria ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Boreoeutheria ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Laurasiatheria ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Laurasiatheria_a ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Artiodactyla ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Artiodactyla_a ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Artiodactyla_b ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Cetacea ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Odontoceti ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Sperm whale MODERN SPECIES 2 INSM2 (ENSPCTG00005009574) RALGAPA1 (ENSPCTG00005009631) ENSPCTG00005010040 BRMS1L (ENSPCTG00005010126) MBIP (ENSPCTG00005010176) NKX2-1 (ENSPCTG00005010288) NKX2-8 (ENSPCTG00005010355) PAX9 (ENSPCTG00005010394) SLC25A21 (ENSPCTG00005010485) MIPOL1 (ENSPCTG00005010727) FOXA1 (ENSPCTG00005010781) TTC6 (ENSPCTG00005010855) ENSPCTG00005011363 SSTR1 (ENSPCTG00005011397) CLEC14A (ENSPCTG00005011415) ENSPCTG00005011430 ##22 SEC23A (ENSPCTG00005011480) GEMIN2 (ENSPCTG00005011644) TRAPPC6B (ENSPCTG00005011742) PNN (ENSPCTG00005011826) MIA2 (ENSPCTG00005012127) FBXO33 (ENSPCTG00005012890) ENSPCTG00005012925 ENSPCTG00005012940 LRFN5 (ENSPCTG00005012980) ENSPCTG00005013052 ENSPCTG00005013112 ENSPCTG00005013146 ENSPCTG00005013201 C11H14orf28 (ENSPCTG00005013271) KLHL28 (ENSPCTG00005013374) Actinopterygii ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Neopterygii ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Osteoglossocephalai ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Clupeocephala ANCESTRAL SPECIES ENSGT00940000154821.a.b ##22 Euteleosteomorpha ANCESTRAL SPECIES 105 ENSGT00490000043385 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.b.f ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000158529 ENSGT00940000156035.y.a Acanthomorphata ANCESTRAL SPECIES 13 ENSGT00490000043385 ENSGT00940000153241.A ENSGT01030000234519.e.a.a.a.b.f ENSGT00940000155949 ENSGT00940000157861 ENSGT00940000154969.b ENSGT00390000001195.a.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771 ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000156317.w.b ENSGT01060000248847 Cod MODERN SPECIES 19 ENSGMOG00000001526 ENSGMOG00000030991 ENSGMOG00000014679 ENSGMOG00000035108 tars1 (ENSGMOG00000013046) gas1a (ENSGMOG00000013082) dapk1 (ENSGMOG00000014466) ctsla (ENSGMOG00000014448) fbp2 (ENSGMOG00000014434) fbp1a (ENSGMOG00000030884) ENSGMOG00000030371 ##18 ENSGMOG00000024075 dmrt1 (ENSGMOG00000014361) #19 dmrt3a (ENSGMOG00000036823) #20 dmrt2a (ENSGMOG00000029488) #21 SMARCA2 (ENSGMOG00000014229) ##22 ENSGMOG00000032387 adamts3 (ENSGMOG00000014174) ENSGMOG00000014167 slc4a4a (ENSGMOG00000014112) ENSGMOG00000014080 ENSGMOG00000014047 ENSGMOG00000014031 ENSGMOG00000013957 ENSGMOG00000031876 ENSGMOG00000013931 ENSGMOG00000006208 ENSGMOG00000006224 ENSGMOG00000006255 sec14l8 (ENSGMOG00000006275) ENSGMOG00000008920 Euacanthomorphacea ANCESTRAL SPECIES 14 ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771 ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000156317.w.b ENSGT01060000248847 Pinecone sodierfish MODERN SPECIES 23 ENSMMDG00005012251 WDFY3 (ENSMMDG00005011129) ENSMMDG00005011103 ENSMMDG00005011100 ENSMMDG00005011095 ENSMMDG00005011079 ENSMMDG00005011076 dapk1 (ENSMMDG00005010990) ctsla (ENSMMDG00005010967) fbp2 (ENSMMDG00005010961) fbp1a (ENSMMDG00005010960) ENSMMDG00005010956 ##18 dmrt1 (ENSMMDG00005010046) #19 dmrt3a (ENSMMDG00005010039) #20 dmrt2a (ENSMMDG00005010038) #21 SMARCA2 (ENSMMDG00005009285) ##22 adamts3 (ENSMMDG00005009249) NPFFR2 (ENSMMDG00005009240) ENSMMDG00005009238 slc4a4a (ENSMMDG00005006622) rufy3 (ENSMMDG00005005076) grsf1 (ENSMMDG00005005016) mapk1 (ENSMMDG00005005013) ENSMMDG00005005006 ppil2 (ENSMMDG00005002099) stambpb (ENSMMDG00005002041) slc39a14 (ENSMMDG00005002038) ascc2 (ENSMMDG00005002008) ENSMMDG00005001993 ENSMMDG00005001990 sec14l8 (ENSMMDG00005001974) Percomorphaceae ANCESTRAL SPECIES 2 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01060000248847 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771 ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Tiger tail seahorse MODERN SPECIES 127 ENSHCOG00000014999 ENSHCOG00000015003 ENSHCOG00000015005 ENSHCOG00000015010 il1b (ENSHCOG00000015032) CNNM4 (ENSHCOG00000015068) ENSHCOG00000015119 ENSHCOG00000015155 ctsla (ENSHCOG00000015171) fbp2 (ENSHCOG00000015189) fbp1a (ENSHCOG00000015217) ENSHCOG00000015238 ##18 dmrt1 (ENSHCOG00000015256) #19 dmrt3a (ENSHCOG00000015270) #20 dmrt2a (ENSHCOG00000015280) #21 SMARCA2 (ENSHCOG00000015348) ##22 ENSHCOG00000015364 Percomorphaceae_B ANCESTRAL SPECIES 7 ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01060000248847 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00740000117099 Percomorphaceae_C ANCESTRAL SPECIES 7 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00740000117099 Eupercaria ANCESTRAL SPECIES 5 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Eupecaria_A ANCESTRAL SPECIES 6 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Eupecaria_B ANCESTRAL SPECIES 6 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Eupecaria_C ANCESTRAL SPECIES 3 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Eupercaria_incertae_sedis ANCESTRAL SPECIES 9 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a European seabass MODERN SPECIES 13 ENSDLAG00005032276 ENSDLAG00005030737 IL-1b (ENSDLAG00005021347) ENSDLAG00005021355 ENSDLAG00005034072 ENSDLAG00005034869 ENSDLAG00005021399 dapk1 (ENSDLAG00005021615) ctsla (ENSDLAG00005022121) fbp2 (ENSDLAG00005022159) ENSDLAG00005022171 ##18 ENSDLAG00005022193 dmrt1 (ENSDLAG00005022195) #19 dmrt3a (ENSDLAG00005022199) #20 dmrt2a (ENSDLAG00005022201) #21 SMARCA2 (ENSDLAG00005022224) ##22 adamts3 (ENSDLAG00005022631) ENSDLAG00005023030 slc4a4a (ENSDLAG00005023146) ENSDLAG00005024580 ENSDLAG00005024826 ENSDLAG00005026946 ENSDLAG00005024830 ENSDLAG00005026868 ppil2 (ENSDLAG00005024870) ENSDLAG00005025085 ENSDLAG00005004796 ENSDLAG00005004830 ENSDLAG00005004920 ENSDLAG00005004975 ENSDLAG00005005505 Large yellow croaker MODERN SPECIES 2 ubox5 (ENSLCRG00005004828) avp (ENSLCRG00005004831) ENSLCRG00005004833 ENSLCRG00005004839 znf367 (ENSLCRG00005004870) ENSLCRG00005004874 ENSLCRG00005004881 PRXL2C (ENSLCRG00005005394) ENSLCRG00005005401 efna5b (ENSLCRG00005005419) gadd45ga (ENSLCRG00005005424) creb3l3l (ENSLCRG00005005425) ENSLCRG00005005427 znf131 (ENSLCRG00005005428) dmrt2a (ENSLCRG00005005430) #21 ENSLCRG00005005438 ##22 adamts3 (ENSLCRG00005005471) NPFFR2 (ENSLCRG00005008809) slc4a4a (ENSLCRG00005008851) rufy3 (ENSLCRG00005014983) grsf1 (ENSLCRG00005015000) CNNM4 (ENSLCRG00005015001) btg4 (ENSLCRG00005015003) slc25a14 (ENSLCRG00005015008) GPR119 (ENSLCRG00005015018) ENSLCRG00005015019 ENSLCRG00005015020 zgc:123105 (ENSLCRG00005015021) ENSLCRG00005015022 SPRY3 (ENSLCRG00005015023) pou4f4 (ENSLCRG00005015025) Gilthead seabream MODERN SPECIES 19 ENSSAUG00010019592 ckap2l (ENSSAUG00010019586) IL-1b (ENSSAUG00010019583) CNNM4 (ENSSAUG00010019578) ENSSAUG00010019574 ENSSAUG00010018389 dapk1 (ENSSAUG00010016634) ctsla (ENSSAUG00010016582) fbp2 (ENSSAUG00010016575) ENSSAUG00010016568 ##18 ENSSAUG00010016563 dmrt1 (ENSSAUG00010016549) #19 ENSSAUG00010016546 dmrt3a (ENSSAUG00010016544) #20 dmrt2a (ENSSAUG00010016541) #21 SMARCA2 (ENSSAUG00010016520) ##22 adamts3 (ENSSAUG00010013279) NPFFR2 (ENSSAUG00010013253) slc4a4a (ENSSAUG00010006520) rufy3 (ENSSAUG00010005056) grsf1 (ENSSAUG00010005052) ENSSAUG00010005051 mapk1 (ENSSAUG00010005040) ENSSAUG00010005039 ppil2 (ENSSAUG00010004422) stambpb (ENSSAUG00010004371) slc39a14 (ENSSAUG00010004359) ascc2 (ENSSAUG00010004326) ENSSAUG00010004307 sec14l8 (ENSSAUG00010004122) ENSSAUG00010004074 Perciformes ANCESTRAL SPECIES 6 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Cottioidei ANCESTRAL SPECIES 27 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Stickleback MODERN SPECIES 12 hs3st1l2 (ENSGACG00000014626) h2az2a (ENSGACG00000014618) PURB (ENSGACG00000014617) ENSGACG00000014611 ENSGACG00000014609 CNNM4 (ENSGACG00000014606) ENSGACG00000014599 dapk1 (ENSGACG00000014591) ctsla (ENSGACG00000014571) fbp2 (ENSGACG00000014527) ENSGACG00000014520 ##18 ENSGACG00000014517 dmrt1 (ENSGACG00000014514) #19 dmrt3a (ENSGACG00000014511) #20 dmrt2a (ENSGACG00000014508) #21 SMARCA2 (ENSGACG00000014488) ##22 adamts3 (ENSGACG00000014484) NPFFR2 (ENSGACG00000014481) slc4a4a (ENSGACG00000014471) rufy3 (ENSGACG00000014452) grsf1 (ENSGACG00000014447) mapk1 (ENSGACG00000014421) ppil2 (ENSGACG00000014408) stambpb (ENSGACG00000014405) ENSGACG00000014403 sec14l8 (ENSGACG00000014363) ENSGACG00000014355 ascc2 (ENSGACG00000014350) slc39a14 (ENSGACG00000014341) tmem175 (ENSGACG00000014334) ENSGACG00000014333 Lumpfish MODERN SPECIES 24 ENSCLMG00005005328 ENSCLMG00005005326 ENSCLMG00005005325 ENSCLMG00005005324 ENSCLMG00005005323 dapk1 (ENSCLMG00005004736) ctsla (ENSCLMG00005004564) fbp2 (ENSCLMG00005004548) fbp1a (ENSCLMG00005004530) ENSCLMG00005004492 ##18 ENSCLMG00005004473 ENSCLMG00005004453 dmrt1 (ENSCLMG00005004315) #19 dmrt3a (ENSCLMG00005004276) #20 dmrt2a (ENSCLMG00005004262) #21 SMARCA2 (ENSCLMG00005004251) ##22 ENSCLMG00005004246 adamts3 (ENSCLMG00005019879) ENSCLMG00005019875 NPFFR2 (ENSCLMG00005019873) slc4a4a (ENSCLMG00005015840) rufy3 (ENSCLMG00005015792) grsf1 (ENSCLMG00005015786) mapk1 (ENSCLMG00005015694) ENSCLMG00005015693 ppil2 (ENSCLMG00005014563) stambpb (ENSCLMG00005014547) slc39a14 (ENSCLMG00005014544) ascc2 (ENSCLMG00005014515) ENSCLMG00005014512 sec14l8 (ENSCLMG00005014510) Perciformes_a ANCESTRAL SPECIES 4 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Channel bull blenny MODERN SPECIES 23 stambpb (ENSCGOG00000024548) ppil2 (ENSCGOG00000024513) ENSCGOG00000024494 mapk1 (ENSCGOG00000024475) ENSCGOG00000024420 dapk1 (ENSCGOG00000024374) ctsla (ENSCGOG00000024322) fbp2 (ENSCGOG00000024316) fbp1a (ENSCGOG00000024315) ENSCGOG00000024313 ##18 ENSCGOG00000024311 ##18 cfap157 (ENSCGOG00000024309) dmrt1 (ENSCGOG00000024307) #19 dmrt3a (ENSCGOG00000024306) #20 dmrt2a (ENSCGOG00000024304) #21 SMARCA2 (ENSCGOG00000023171) ##22 ENSCGOG00000023030 adamts3 (ENSCGOG00000022962) NPFFR2 (ENSCGOG00000022960) slc4a4a (ENSCGOG00000020741) rufy3 (ENSCGOG00000020602) ENSCGOG00000020594 CNNM4 (ENSCGOG00000020588) ENSCGOG00000020584 ENSCGOG00000020581 h2az2b (ENSCGOG00000020539) hs3st1l2 (ENSCGOG00000020535) ENSCGOG00000020532 ENSCGOG00000020530 ENSCGOG00000020524 ENSCGOG00000020520 Pike perch MODERN SPECIES 2 ckap2l (ENSSLUG00000022264) ENSSLUG00000022262 CNNM4 (ENSSLUG00000022254) ENSSLUG00000022252 ENSSLUG00000021851 dapk1 (ENSSLUG00000020591) ctsla (ENSSLUG00000020469) fbp2 (ENSSLUG00000020461) fbp1a (ENSSLUG00000020452) ENSSLUG00000020449 ##18 ENSSLUG00000020447 ##18 cfap157 (ENSSLUG00000020444) dmrt1 (ENSSLUG00000020433) #19 dmrt3a (ENSSLUG00000020427) #20 dmrt2a (ENSSLUG00000020423) #21 SMARCA2 (ENSSLUG00000020089) ##22 adamts3 (ENSSLUG00000020050) NPFFR2 (ENSSLUG00000020045) slc4a4a (ENSSLUG00000017011) rufy3 (ENSSLUG00000016630) grsf1 (ENSSLUG00000016599) mapk1 (ENSSLUG00000016463) ENSSLUG00000016437 ppil2 (ENSSLUG00000014154) stambpb (ENSSLUG00000014048) slc39a14 (ENSSLUG00000014041) ascc2 (ENSSLUG00000014017) ENSSLUG00000014000 sec14l8 (ENSSLUG00000013541) ENSSLUG00000008056 ENSSLUG00000007835 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 152 ENSLBEG00000018596 ##22 adamts3 (ENSLBEG00000018508) NPFFR2 (ENSLBEG00000018398) slc4a4a (ENSLBEG00000018325) rufy3 (ENSLBEG00000018192) grsf1 (ENSLBEG00000018100) mapk1 (ENSLBEG00000018048) ENSLBEG00000017955 ppil2 (ENSLBEG00000017876) stambpb (ENSLBEG00000017822) slc39a14 (ENSLBEG00000017738) ascc2 (ENSLBEG00000017390) ENSLBEG00000017264 sec14l8 (ENSLBEG00000017162) ENSLBEG00000017059 ENSLBEG00000017018 Ballan wrasse MODERN SPECIES 396 ENSLBEG00000012999 ENSLBEG00000012969 CNNM4 (ENSLBEG00000012919) ENSLBEG00000012832 dapk1 (ENSLBEG00000012745) ENSLBEG00000012719 ctsla (ENSLBEG00000012701) fbp2 (ENSLBEG00000012663) fbp1a (ENSLBEG00000012633) ENSLBEG00000012596 ##18 cfap157 (ENSLBEG00000012578) dmrt1 (ENSLBEG00000012548) #19 dmrt3a (ENSLBEG00000012531) #20 dmrt2a (ENSLBEG00000012522) #21 ENSLBEG00000012509 ##22 Ballan wrasse DUPLICATION Ballan wrasse MODERN SPECIES 1637 ENSLBEG00000009787 ##22 Ballan wrasse MODERN SPECIES 2043 ENSLBEG00000017183 ##22 Tetraodontidae ANCESTRAL SPECIES 12 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Fugu MODERN SPECIES 13 h2az2a (ENSTRUG00000020974) PURB (ENSTRUG00000025235) ckap2l (ENSTRUG00000019615) il1b (ENSTRUG00000016002) cnnm4 (ENSTRUG00000015973) ENSTRUG00000015919 dapk1 (ENSTRUG00000015844) ctsla (ENSTRUG00000015823) fbp2 (ENSTRUG00000015799) fbp1a (ENSTRUG00000018578) ENSTRUG00000015725 ##18 ENSTRUG00000015719 dmrt1 (ENSTRUG00000015699) #19 dmrt3a (ENSTRUG00000015692) #20 dmrt2 (ENSTRUG00000015666) #21 SMARCA2 (ENSTRUG00000015619) ##22 adamts3 (ENSTRUG00000015613) vsig8b (ENSTRUG00000015572) npffr2 (ENSTRUG00000015587) slc4a4a (ENSTRUG00000015446) rufy3 (ENSTRUG00000015381) grsf1 (ENSTRUG00000015354) mapk1 (ENSTRUG00000015300) ENSTRUG00000022168 ppil2 (ENSTRUG00000015202) stambpb (ENSTRUG00000015147) slc39a14 (ENSTRUG00000015109) ascc2 (ENSTRUG00000015035) ENSTRUG00000023100 sec14l8 (ENSTRUG00000014979) ENSTRUG00000032455 Tetraodon MODERN SPECIES 3 ENSTNIG00000015360 ENSTNIG00000015359 sec14l8 (ENSTNIG00000015358) ENSTNIG00000015357 ascc2 (ENSTNIG00000015356) slc39a14 (ENSTNIG00000015355) stambpb (ENSTNIG00000015354) ppil2 (ENSTNIG00000015353) ENSTNIG00000015352 mapk1 (ENSTNIG00000015351) ENSTNIG00000015350 rufy3 (ENSTNIG00000015349) slc4a4a (ENSTNIG00000015348) NPFFR2 (ENSTNIG00000015347) ENSTNIG00000015346 ENSTNIG00000005521 ##22 ENSTNIG00000001666 dmrt2a (ENSTNIG00000015642) #21 dmrt3a (ENSTNIG00000015641) #20 dmrt1 (ENSTNIG00000015640) #19 ENSTNIG00000015639 ENSTNIG00000015638 ##18 fbp1a (ENSTNIG00000015637) fbp2 (ENSTNIG00000015636) ctsla (ENSTNIG00000002321) dapk1 (ENSTNIG00000015634) ENSTNIG00000015633 CNNM4 (ENSTNIG00000015632) il1b (ENSTNIG00000001101) ENSTNIG00000015631 purbb (ENSTNIG00000015630) Percomorphaceae_D ANCESTRAL SPECIES 7 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00740000117099 Carangaria ANCESTRAL SPECIES 9 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Carangaria_A ANCESTRAL SPECIES 79 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 Seriola ANCESTRAL SPECIES 115 ENSGT00940000156317.w.b ENSGT00950000182943.eb ENSGT00950000182943.db ENSGT00530000063691.a ENSGT00950000183162.a.b.i.a ENSGT00900000140979.a.b ENSGT00900000141033.a ENSGT00390000015513.a.b.a ENSGT00390000015513.a.a.b ENSGT00940000153321.b.b ENSGT00940000153424.a.b ENSGT00940000161917.b ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 Greater amberjack MODERN SPECIES 183 dmrt2a (ENSSDUG00000008820) #21 ENSSDUG00000008852 ##22 adamts3 (ENSSDUG00000009020) NPFFR2 (ENSSDUG00000009082) slc4a4a (ENSSDUG00000009152) rufy3 (ENSSDUG00000009295) ENSSDUG00000009397 mapk1 (ENSSDUG00000009488) YPEL1 (ENSSDUG00000009510) Yellowtail amberjack MODERN SPECIES 2921 CNNM4 (ENSSLDG00000025107) ENSSLDG00000025112 ENSSLDG00000025123 ckap2l (ENSSLDG00000025126) PURB (ENSSLDG00000025132) h2az2a (ENSSLDG00000025137) RUSC2 (ENSSLDG00000025142) fbp1a (ENSSLDG00000025153) fbp2 (ENSSLDG00000025165) ctsla (ENSSLDG00000025276) dapk1 (ENSSLDG00000025280) ENSSLDG00000025286 dmrt1 (ENSSLDG00000025304) #19 dmrt3a (ENSSLDG00000025443) #20 dmrt2a (ENSSLDG00000025446) #21 SMARCA2 (ENSSLDG00000025449) ##22 adamts3 (ENSSLDG00000025458) NPFFR2 (ENSSLDG00000025466) slc4a4a (ENSSLDG00000025472) rufy3 (ENSSLDG00000025488) grsf1 (ENSSLDG00000025494) mapk1 (ENSSLDG00000025502) ypel1 (ENSSLDG00000025506) ppil2 (ENSSLDG00000025508) stambpb (ENSSLDG00000025521) slc39a14 (ENSSLDG00000025523) ascc2 (ENSSLDG00000025524) ENSSLDG00000025526 sec14l8 (ENSSLDG00000000095) cfap157 (ENSSLDG00000000200) ENSSLDG00000000253 ##18 Barramundi perch MODERN SPECIES 95 hs3st1l2 (ENSLCAG00010023887) h2az2b (ENSLCAG00010023846) PURB (ENSLCAG00010023833) ENSLCAG00010023831 ENSLCAG00010023826 CNNM4 (ENSLCAG00010023822) ENSLCAG00010023757 dapk1 (ENSLCAG00010023657) ctsla (ENSLCAG00010023621) fbp1a (ENSLCAG00010023610) ENSLCAG00010023606 ##18 cfap157 (ENSLCAG00010023604) dmrt1 (ENSLCAG00010023595) #19 dmrt3a (ENSLCAG00010023592) #20 dmrt2a (ENSLCAG00010023591) #21 SMARCA2 (ENSLCAG00010023510) ##22 adamts3 (ENSLCAG00010023421) NPFFR2 (ENSLCAG00010023407) Pleuronectoidei ANCESTRAL SPECIES 34 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Tongue sole MODERN SPECIES 398 zgc:152830 (ENSCSEG00000019474) FAHD2A (ENSCSEG00000019465) gpat2 (ENSCSEG00000019441) adra2b (ENSCSEG00000019437) dusp2 (ENSCSEG00000019434) MYORG (ENSCSEG00000019430) dapk1 (ENSCSEG00000019414) catl (ENSCSEG00000019396) fbp2 (ENSCSEG00000019390) fbp1a (ENSCSEG00000019386) ENSCSEG00000019381 ##18 ENSCSEG00000019379 dmrt1 (ENSCSEG00000019352) #19 dmrt3a (ENSCSEG00000019346) #20 dmrt2a (ENSCSEG00000019331) #21 SMARCA2 (ENSCSEG00000019311) ##22 adamts3 (ENSCSEG00000019302) NPFFR2 (ENSCSEG00000019293) slc4a4a (ENSCSEG00000019255) rufy3 (ENSCSEG00000019228) ENSCSEG00000019209 mapk1 (ENSCSEG00000019114) ENSCSEG00000019092 ENSCSEG00000019086 ENSCSEG00000019076 LHX6 (ENSCSEG00000019057) krt1-c5 (ENSCSEG00000019044) ENSCSEG00000019025 tal2 (ENSCSEG00000019020) ENSCSEG00000019019 ENSCSEG00000019012 Turbot MODERN SPECIES 21 ENSSMAG00000012508 ENSSMAG00000012485 ENSSMAG00000032210 ENSSMAG00000012473 IL-1b (ENSSMAG00000012432) ENSSMAG00000012419 ENSSMAG00000013308 dapk1 (ENSSMAG00000013330) ctsla (ENSSMAG00000013382) fbp1a (ENSSMAG00000013448) ENSSMAG00000013519 ##18 ENSSMAG00000013599 dmrt1 (ENSSMAG00000013610) #19 dmrt3a (ENSSMAG00000022000) #20 dmrt2a (ENSSMAG00000013678) #21 SMARCA2 (ENSSMAG00000013707) ##22 adamts3 (ENSSMAG00000013877) ENSSMAG00000013933 slc4a4a (ENSSMAG00000013940) ENSSMAG00000013999 ENSSMAG00000014074 ENSSMAG00000014105 ppil2 (ENSSMAG00000014124) ENSSMAG00000027503 ENSSMAG00000037358 ENSSMAG00000014169 ENSSMAG00000014181 ENSSMAG00000014190 ENSSMAG00000014200 ENSSMAG00000014215 ENSSMAG00000014438 Anabantaria ANCESTRAL SPECIES 4 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00740000117099 Zig-zag eel MODERN SPECIES 23 purbb (ENSMAMG00000003719) ENSMAMG00000003706 il1b (ENSMAMG00000003683) ENSMAMG00000003649 ENSMAMG00000003503 dapk1 (ENSMAMG00000003382) ctsla (ENSMAMG00000003344) fbp2 (ENSMAMG00000003335) fbp1a (ENSMAMG00000003288) ENSMAMG00000003202 ##18 ENSMAMG00000003187 dmrt1 (ENSMAMG00000003170) #19 dmrt3a (ENSMAMG00000003154) #20 dmrt2a (ENSMAMG00000003133) #21 ENSMAMG00000027282 SMARCA2 (ENSMAMG00000003056) ##22 ENSMAMG00000025030 adamts3 (ENSMAMG00000002934) ENSMAMG00000002874 slc4a4a (ENSMAMG00000002757) ENSMAMG00000002645 ENSMAMG00000002627 ENSMAMG00000002611 ENSMAMG00000002565 ENSMAMG00000002549 nipbla (ENSMAMG00000002314) ENSMAMG00000002256 lmbrd2a (ENSMAMG00000002223) GOLM1 (ENSMAMG00000002214) naa35 (ENSMAMG00000002139) agtpbp1 (ENSMAMG00000001973) Anabantoidei ANCESTRAL SPECIES 4 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000161453 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Climbing perch MODERN SPECIES 22 hs3st1l2 (ENSATEG00000030108) h2az2b (ENSATEG00000006161) ENSATEG00000006188 il1b (ENSATEG00000006195) ENSATEG00000006363 ENSATEG00000006396 dapk1 (ENSATEG00000006554) ctsla (ENSATEG00000006648) fbp2 (ENSATEG00000006666) fbp1a (ENSATEG00000006725) ENSATEG00000006766 ##18 ENSATEG00000006821 dmrt1 (ENSATEG00000006852) #19 dmrt3a (ENSATEG00000006893) #20 dmrt2a (ENSATEG00000006909) #21 SMARCA2 (ENSATEG00000006916) ##22 adamts3 (ENSATEG00000006922) ENSATEG00000007004 slc4a4a (ENSATEG00000007019) ENSATEG00000007145 ENSATEG00000007185 mapk1 (ENSATEG00000007189) ENSATEG00000028118 ppil2 (ENSATEG00000007243) ENSATEG00000007508 ENSATEG00000007546 ENSATEG00000007576 ENSATEG00000007593 ENSATEG00000007626 ENSATEG00000007661 ENSATEG00000007704 Siamese fighting fish MODERN SPECIES 20 ppil3 (ENSBSLG00000012578) zgc:101858 (ENSBSLG00000012594) ENSBSLG00000012605 KCNT1 (ENSBSLG00000012624) camsap1b (ENSBSLG00000012715) ENSBSLG00000012882 dapk1 (ENSBSLG00000012906) ctsla (ENSBSLG00000013024) fbp2 (ENSBSLG00000013027) fbp1a (ENSBSLG00000013030) ENSBSLG00000013134 ##18 cfap157 (ENSBSLG00000013197) dmrt1 (ENSBSLG00000013231) #19 dmrt3a (ENSBSLG00000013269) #20 dmrt2a (ENSBSLG00000013292) #21 SMARCA2 (ENSBSLG00000013566) ##22 adamts3 (ENSBSLG00000016075) NPFFR2 (ENSBSLG00000017740) slc4a4a (ENSBSLG00000017814) rufy3 (ENSBSLG00000019126) ppil2 (ENSBSLG00000019292) YPEL2 (ENSBSLG00000020127) mapk1 (ENSBSLG00000020138) stambpb (ENSBSLG00000020226) slc39a14 (ENSBSLG00000020229) ascc2 (ENSBSLG00000020238) ENSBSLG00000020252 sec14l8 (ENSBSLG00000020266) RUSC2 (ENSBSLG00000020375) ENSBSLG00000020381 ENSBSLG00000020383 Ovalentaria ANCESTRAL SPECIES 4 ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT01060000248847 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Ovalentaria_B ANCESTRAL SPECIES 27 ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Cichlidae ANCESTRAL SPECIES 6 ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720.h ENSGT00940000165775.a ENSGT00940000154929.C Pseudocrenilabrinae ANCESTRAL SPECIES 11 ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720.h ENSGT00940000165775.a ENSGT00940000154929.C Nile tilapia MODERN SPECIES 3 ENSONIG00000032674 ENSONIG00000034815 zgc:113274 (ENSONIG00000032281) ENSONIG00000027235 ENSONIG00000035872 ENSONIG00000042907 dapk1 (ENSONIG00000014229) ctsla (ENSONIG00000014226) fbp1a (ENSONIG00000014217) ENSONIG00000014211 ##18 ENSONIG00000036306 cfap157 (ENSONIG00000014207) dmrt1 (ENSONIG00000014201) #19 dmrt3a (ENSONIG00000030065) #20 dmrt2 (ENSONIG00000014197) #21 SMARCA2 (ENSONIG00000014163) ##22 adamts3 (ENSONIG00000014157) NPFFR2 (ENSONIG00000014155) slc4a4a (ENSONIG00000014129) rufy3 (ENSONIG00000014125) ENSONIG00000035387 grsf1 (ENSONIG00000014119) mapk1 (ENSONIG00000031950) ENSONIG00000014113 ppil2 (ENSONIG00000014107) stambpb (ENSONIG00000014103) slc39a14 (ENSONIG00000014097) ascc2 (ENSONIG00000014089) ENSONIG00000033052 sec14l8 (ENSONIG00000014084) ENSONIG00000014072 Pseudocrenilabrinae_A ANCESTRAL SPECIES 8 ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720.h ENSGT00940000165775.a ENSGT00940000154929.C Haplochromini ANCESTRAL SPECIES 4 ENSGT00940000163484.t.b.b.a.b.a.d.c.a ENSGT01100000263483.D.c.b.a.b.d ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT01100000263538.A.b.h.b.b.b ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720.h ENSGT00940000165775.a ENSGT00940000154929.C Burton s mouthbrooder MODERN SPECIES 315 ENSHBUG00000007195 ENSHBUG00000007191 ENSHBUG00000007182 dapk1 (ENSHBUG00000000766) fbp2 (ENSHBUG00000007113) fbp1a (ENSHBUG00000007096) ENSHBUG00000007078 ##18 ENSHBUG00000007032 cfap157 (ENSHBUG00000007017) dmrt1 (ENSHBUG00000006972) #19 dmrt3a (ENSHBUG00000006717) #20 dmrt2a (ENSHBUG00000006703) #21 SMARCA2 (ENSHBUG00000006691) ##22 adamts3 (ENSHBUG00000006538) NPFFR2 (ENSHBUG00000006468) slc4a4a (ENSHBUG00000006451) rufy3 (ENSHBUG00000006392) grsf1 (ENSHBUG00000006284) mapk1 (ENSHBUG00000006261) ENSHBUG00000006232 ppil2 (ENSHBUG00000006195) stambpb (ENSHBUG00000005759) slc39a14 (ENSHBUG00000005732) ascc2 (ENSHBUG00000005720) ENSHBUG00000005673 sec14l8 (ENSHBUG00000005666) ENSHBUG00000005640 ENSHBUG00000005549 Haplochromini_A ANCESTRAL SPECIES 4 ENSGT00940000163484.t.b.b.a.b.a.d.c.a ENSGT01100000263483.D.c.b.a.b.d ENSGT00940000153424.a.b.j ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT01100000263538.A.b.h.b.b.b ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720.h ENSGT00940000165775.a ENSGT00940000154929.C Haplochromini_B ANCESTRAL SPECIES 2 ENSGT00940000163484.t.b.b.a.b.a.d.c.a ENSGT01100000263483.D.c.b.a.b.d ENSGT00940000153424.a.b.j ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT01100000263538.A.b.h.b.b.b ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720.h ENSGT00940000165775.a ENSGT00900000141033.a Eastern happy MODERN SPECIES 3 ENSACLG00000005015 ENSACLG00000005005 ENSACLG00000004981 ENSACLG00000004980 dapk1 (ENSACLG00000004772) ctsla (ENSACLG00000004751) fbp2 (ENSACLG00000004707) fbp1a (ENSACLG00000004679) ENSACLG00000004550 ##18 ENSACLG00000004543 ENSACLG00000004527 cfap157 (ENSACLG00000004474) dmrt1 (ENSACLG00000004443) #19 dmrt3a (ENSACLG00000004334) #20 dmrt2a (ENSACLG00000004324) #21 SMARCA2 (ENSACLG00000004248) ##22 adamts3 (ENSACLG00000003995) NPFFR2 (ENSACLG00000003977) slc4a4a (ENSACLG00000003770) rufy3 (ENSACLG00000003721) ENSACLG00000003685 mapk1 (ENSACLG00000003649) ENSACLG00000003634 ppil2 (ENSACLG00000003563) stambpb (ENSACLG00000003507) slc39a14 (ENSACLG00000003476) ascc2 (ENSACLG00000003414) ENSACLG00000003375 sec14l8 (ENSACLG00000003182) ENSACLG00000003151 ENSACLG00000002907 Zebra mbuna MODERN SPECIES 1094 OLFM1 (ENSMZEG00005020805) ENSMZEG00005020801 ENSMZEG00005020799 ENSMZEG00005020796 ENSMZEG00005020792 dapk1 (ENSMZEG00005020786) ctsla (ENSMZEG00005020780) fbp2 (ENSMZEG00005020775) fbp1a (ENSMZEG00005020768) ENSMZEG00005020765 ##18 ENSMZEG00005020762 cfap157 (ENSMZEG00005020758) dmrt1 (ENSMZEG00005020750) #19 dmrt3a (ENSMZEG00005020744) #20 dmrt2a (ENSMZEG00005020738) #21 SMARCA2 (ENSMZEG00005020709) ##22 adamts3 (ENSMZEG00005020688) NPFFR2 (ENSMZEG00005020684) slc4a4a (ENSMZEG00005020663) rufy3 (ENSMZEG00005020641) ENSMZEG00005020633 mapk1 (ENSMZEG00005020626) ENSMZEG00005020622 ppil2 (ENSMZEG00005020614) stambpb (ENSMZEG00005020604) slc39a14 (ENSMZEG00005020599) ascc2 (ENSMZEG00005020567) ENSMZEG00005020551 sec14l8 (ENSMZEG00005020534) ENSMZEG00005020504 RUSC2 (ENSMZEG00005020480) P. nyererei MODERN SPECIES 333 dapk1 (ENSPNYG00000003754) ctsla (ENSPNYG00000003827) fbp2 (ENSPNYG00000003871) ENSPNYG00000003901 ENSPNYG00000003913 ##18 ENSPNYG00000003931 ##18 ENSPNYG00000003971 cfap157 (ENSPNYG00000003983) dmrt1 (ENSPNYG00000004057) #19 dmrt3a (ENSPNYG00000004331) #20 dmrt2a (ENSPNYG00000004377) #21 SMARCA2 (ENSPNYG00000004533) ##22 adamts3 (ENSPNYG00000005116) NPFFR2 (ENSPNYG00000005226) slc4a4a (ENSPNYG00000005284) rufy3 (ENSPNYG00000005345) grsf1 (ENSPNYG00000005379) mapk1 (ENSPNYG00000005403) ENSPNYG00000005433 ppil2 (ENSPNYG00000005470) stambpb (ENSPNYG00000005494) slc39a14 (ENSPNYG00000005521) ascc2 (ENSPNYG00000005541) ENSPNYG00000005564 sec14l8 (ENSPNYG00000005583) ENSPNYG00000005633 ENSPNYG00000005763 Lyretail cichlid MODERN SPECIES 342 cfap157 (ENSNBRG00000019296) dmrt1 (ENSNBRG00000018325) #19 dmrt3a (ENSNBRG00000018094) #20 dmrt2a (ENSNBRG00000018080) #21 SMARCA2 (ENSNBRG00000017998) ##22 adamts3 (ENSNBRG00000017943) NPFFR2 (ENSNBRG00000017882) slc4a4a (ENSNBRG00000017822) rufy3 (ENSNBRG00000017791) grsf1 (ENSNBRG00000017774) MAPK1 (ENSNBRG00000017758) ENSNBRG00000017730 ppil2 (ENSNBRG00000017658) stambpb (ENSNBRG00000017623) slc39a14 (ENSNBRG00000017603) ascc2 (ENSNBRG00000017546) ENSNBRG00000017515 sec14l8 (ENSNBRG00000017480) ENSNBRG00000017340 ENSNBRG00000017307 Midas cichlid MODERN SPECIES 360 NXPH2 (ENSACIG00000015004) spoplb (ENSACIG00000015018) HNMT (ENSACIG00000015038) hnmt (ENSACIG00000015058) THSD7B (ENSACIG00000015083) ENSACIG00000015270 cxcr4a (ENSACIG00000015281) dars1 (ENSACIG00000015293) TMBIM1 (ENSACIG00000015335) pnkd (ENSACIG00000015359) ENSACIG00000015403 ##18 cfap157 (ENSACIG00000015458) dmrt1 (ENSACIG00000015473) #19 dmrt3a (ENSACIG00000015488) #20 dmrt2a (ENSACIG00000015505) #21 SMARCA2 (ENSACIG00000015607) ##22 adamts3 (ENSACIG00000015687) NPFFR2 (ENSACIG00000015746) Pomacentridae ANCESTRAL SPECIES 26 ENSGT00390000014658 ENSGT00940000157157.b.a.a ENSGT00940000163149.a.b.c.b ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a.q ENSGT00940000165775.a.r Pomacentridae_A ANCESTRAL SPECIES 34 ENSGT00390000014658 ENSGT00940000157157.b.a.a ENSGT00940000163149.a.b.c.b ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010.b ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a.q.a ENSGT00900000141033.a Amphiprion ANCESTRAL SPECIES 20 ENSGT00390000014658 ENSGT00940000157157.b.a.a ENSGT00940000163149.a.b.c.b ENSGT00940000158199 ENSGT00940000156724 ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000154673.a.d.a.c.b Orange clownfish MODERN SPECIES 19 ubac1 (ENSAPEG00000009753) notch1b (ENSAPEG00000009619) ENSAPEG00000009592 inpp5e (ENSAPEG00000009581) pmpca (ENSAPEG00000009521) ENSAPEG00000009471 dapk1 (ENSAPEG00000009387) ctsla (ENSAPEG00000009352) fbp2 (ENSAPEG00000009338) fbp1a (ENSAPEG00000009304) ENSAPEG00000009278 ##18 cfap157 (ENSAPEG00000009240) dmrt1 (ENSAPEG00000008009) #19 dmrt3a (ENSAPEG00000007838) #20 dmrt2a (ENSAPEG00000007763) #21 SMARCA2 (ENSAPEG00000007646) ##22 adamts3 (ENSAPEG00000007558) NPFFR2 (ENSAPEG00000007470) slc4a4a (ENSAPEG00000007369) rufy3 (ENSAPEG00000007268) ENSAPEG00000007240 ENSAPEG00000007234 ENSAPEG00000007229 atp5fa1 (ENSAPEG00000007106) RNF165 (ENSAPEG00000007058) LOXHD1 (ENSAPEG00000006858) apip (ENSAPEG00000006844) ptger4a (ENSAPEG00000006833) mrps27 (ENSAPEG00000006821) ZNF366 (ENSAPEG00000006794) fabp1b.1 (ENSAPEG00000006770) Clown anemonefish MODERN SPECIES 1437 ENSAOCG00000009647 ##22 camsap1b (ENSAOCG00000009715) ubac1 (ENSAOCG00000009737) notch1b (ENSAOCG00000009820) ENSAOCG00000009842 inpp5e (ENSAOCG00000009858) pmpca (ENSAOCG00000009880) Spiny chromis MODERN SPECIES 212 pgk1 (ENSAPOG00000000699) kctd7 (ENSAPOG00000002181) KCNJ6 (ENSAPOG00000002197) rabgef1 (ENSAPOG00000002214) ENSAPOG00000002257 ENSAPOG00000000776 dapk1 (ENSAPOG00000002327) ctsla (ENSAPOG00000002348) fbp2 (ENSAPOG00000002366) fbp1a (ENSAPOG00000002388) ENSAPOG00000002404 ##18 cfap157 (ENSAPOG00000002431) dmrt1 (ENSAPOG00000002453) #19 dmrt3a (ENSAPOG00000002470) #20 dmrt2a (ENSAPOG00000002533) #21 SMARCA2 (ENSAPOG00000002641) ##22 adamts3 (ENSAPOG00000002707) Bicolor damselfish DUPLICATION Bicolor damselfish MODERN SPECIES 527 ENSSPAG00000020091 ##22 adamts3 (ENSSPAG00000020190) ENSSPAG00000020230 NPFFR2 (ENSSPAG00000020245) Bicolor damselfish MODERN SPECIES 307 ubac1 (ENSSPAG00000006461) notch1b (ENSSPAG00000006379) ENSSPAG00000006225 inpp5e (ENSSPAG00000006192) pmpca (ENSSPAG00000006160) ENSSPAG00000006126 dapk1 (ENSSPAG00000005994) ctsla (ENSSPAG00000005961) fbp2 (ENSSPAG00000005949) fbp1a (ENSSPAG00000005930) ENSSPAG00000005878 ##18 cfap157 (ENSSPAG00000005851) dmrt1 (ENSSPAG00000005837) #19 dmrt3a (ENSSPAG00000005816) #20 dmrt2a (ENSSPAG00000005753) #21 ENSSPAG00000005741 ##22 Atherinomorphae ANCESTRAL SPECIES 1 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Cyprinodontiformes ANCESTRAL SPECIES 1 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Aplocheiloidei ANCESTRAL SPECIES 45 ENSGT00390000001485 ENSGT00940000155798 ENSGT00940000159786 ENSGT00940000155852 ENSGT00390000009378 ENSGT00390000008748.a ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a Turquoise killifish MODERN SPECIES 1620 PRDM6 (ENSNFUG00015006869) ENSNFUG00015006882 ENSNFUG00015006886 ZNF608 (ENSNFUG00015007020) DAPK1 (ENSNFUG00015007056) CTSL (ENSNFUG00015007120) ENSNFUG00015007122 fbp2 (ENSNFUG00015007130) FBP1A (ENSNFUG00015007144) ENSNFUG00015007226 ##18 ENSNFUG00015007236 dmrt1 (ENSNFUG00015007243) #19 ENSNFUG00015007248 dmrt3a (ENSNFUG00015007255) #20 dmrt2a (ENSNFUG00015007267) #21 SMARCA2 (ENSNFUG00015007311) ##22 adamts3 (ENSNFUG00015007581) NPFFR2.1 (ENSNFUG00015009382) slc4a4a (ENSNFUG00015009614) SLC39A14 (ENSNFUG00015012480) stambpb (ENSNFUG00015012485) PPIL2 (ENSNFUG00015012545) ENSNFUG00015013362 p2rx7 (ENSNFUG00015013385) gstt1a (ENSNFUG00015013505) MMP11 (ENSNFUG00015013546) SMARCB1 (ENSNFUG00015013654) ralgds (ENSNFUG00015013702) ENSNFUG00015013840 ptgesl (ENSNFUG00015013847) GLE1 (ENSNFUG00015013870) Mangrove rivulus MODERN SPECIES 658 dmrt2a (ENSKMAG00000015792) #21 ENSKMAG00000015804 ENSKMAG00000015844 ##22 Cyprinodontoidei ANCESTRAL SPECIES 1 ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb ENSGT00940000153321.b.b.db.a.b ENSGT00940000153321.b.b.db.a.a ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Poeciliinae ANCESTRAL SPECIES 5 ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb ENSGT00940000153321.b.b.db.a.b ENSGT00940000153321.b.b.db.a.a.a ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Poecilia ANCESTRAL SPECIES 35 ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb ENSGT00940000153321.b.b.db.a.b ENSGT00940000153321.b.b.db.a.a.a ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C NAME_6 ANCESTRAL SPECIES 95 ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Amazon molly MODERN SPECIES 272 ENSPFOG00000001077 ##18 ENSPFOG00000001270 dmrt1 (ENSPFOG00000001335) #19 dmrt3a (ENSPFOG00000001398) #20 dmrt2a (ENSPFOG00000001432) #21 SMARCA2 (ENSPFOG00000001856) ##22 adamts3 (ENSPFOG00000002994) NPFFR2 (ENSPFOG00000004392) ENSPFOG00000022515 slc4a4a (ENSPFOG00000004493) rufy3 (ENSPFOG00000005588) grsf1 (ENSPFOG00000006122) mapk1 (ENSPFOG00000006212) ENSPFOG00000006345 ppil2 (ENSPFOG00000006423) stambpb (ENSPFOG00000006573) slc39a14 (ENSPFOG00000006705) ascc2 (ENSPFOG00000006820) ENSPFOG00000007031 sec14l8 (ENSPFOG00000007105) ENSPFOG00000007471 Sailfin molly MODERN SPECIES 733 ENSPLAG00000018006 ##18 ENSPLAG00000017936 dmrt1 (ENSPLAG00000017909) #19 dmrt3a (ENSPLAG00000017896) #20 dmrt2a (ENSPLAG00000017855) #21 SMARCA2 (ENSPLAG00000017829) ##22 Guppy MODERN SPECIES 461 ENSPREG00000016846 ENSPREG00000016826 ENSPREG00000016816 ENSPREG00000016801 dapk1 (ENSPREG00000016685) ctsla (ENSPREG00000016624) ENSPREG00000016197 ENSPREG00000016121 fbp2 (ENSPREG00000016101) fbp1a (ENSPREG00000016077) ENSPREG00000016036 ##18 ENSPREG00000016006 dmrt1 (ENSPREG00000014224) #19 dmrt3a (ENSPREG00000014006) #20 dmrt2a (ENSPREG00000013995) #21 SMARCA2 (ENSPREG00000013800) ##22 adamts3 (ENSPREG00000013740) NPFFR2 (ENSPREG00000013707) slc4a4a (ENSPREG00000013576) ENSPREG00000013535 rufy3 (ENSPREG00000013424) grsf1 (ENSPREG00000013383) mapk1 (ENSPREG00000013354) ENSPREG00000013338 ppil2 (ENSPREG00000013294) ENSPREG00000013233 CNNM4 (ENSPREG00000013179) ENSPREG00000013111 ckap2l (ENSPREG00000013098) PURB (ENSPREG00000013084) h2az2a (ENSPREG00000013064) Platyfish MODERN SPECIES 3 ENSXMAG00000027821 CNNM4 (ENSXMAG00000016797) ENSXMAG00000016242 dapk1 (ENSXMAG00000015491) ENSXMAG00000015550 ENSXMAG00000027399 ENSXMAG00000024804 fbp2 (ENSXMAG00000027530) ENSXMAG00000026310 fbp1a (ENSXMAG00000015568) ENSXMAG00000015579 ##18 ENSXMAG00000015585 dmrt1 (ENSXMAG00000015591) #19 dmrt3a (ENSXMAG00000015600) #20 dmrt2a (ENSXMAG00000015603) #21 SMARCA2 (ENSXMAG00000015611) ##22 adamts3 (ENSXMAG00000002348) ENSXMAG00000023521 NPFFR2 (ENSXMAG00000002359) ENSXMAG00000026960 RUSC2 (ENSXMAG00000012784) ENSXMAG00000018126 sec14l8 (ENSXMAG00000018111) ENSXMAG00000018104 ascc2 (ENSXMAG00000018075) slc39a14 (ENSXMAG00000018067) stambpb (ENSXMAG00000015495) ppil2 (ENSXMAG00000006458) ENSXMAG00000029883 mapk1 (ENSXMAG00000006444) grsf1 (ENSXMAG00000029710) NAME_4 ANCESTRAL SPECIES 108 ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b.eb ENSGT00940000153321.b.b.db.a.b ENSGT00940000153321.b.b.db.b ENSGT00390000015513.a.a.b.d ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00730000111240 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 Sheepshead minnow MODERN SPECIES 739 ENSCVAG00000015819 PTCD1 (ENSCVAG00000015826) fbxl18 (ENSCVAG00000015834) ENSCVAG00000015858 ENSCVAG00000015870 ENSCVAG00000015892 ENSCVAG00000015915 ENSCVAG00000016343 fbp2 (ENSCVAG00000016361) fbp1a (ENSCVAG00000016383) ENSCVAG00000016441 ##18 ENSCVAG00000016463 dmrt1 (ENSCVAG00000016485) #19 dmrt3a (ENSCVAG00000016490) #20 dmrt2a (ENSCVAG00000016506) #21 ENSCVAG00000016571 ##22 ENSCVAG00000016587 #22 Mummichog MODERN SPECIES 2436 ENSFHEG00000022454 ENSFHEG00000022438 CNNM4 (ENSFHEG00000022406) ENSFHEG00000022331 dapk1 (ENSFHEG00000022183) ctsl (ENSFHEG00000022061) ENSFHEG00000021852 ENSFHEG00000021826 fbp2 (ENSFHEG00000021794) fbp1a (ENSFHEG00000021762) ENSFHEG00000021710 ##18 ENSFHEG00000021541 dmrt1 (ENSFHEG00000021514) #19 dmrt3a (ENSFHEG00000021315) #20 dmrt2a (ENSFHEG00000021306) #21 SMARCA2 (ENSFHEG00000021250) ##22 Oryzias ANCESTRAL SPECIES 56 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b.c.a ENSGT00390000015513.a.a.b.c.b ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Oryzias_b ANCESTRAL SPECIES 79 ENSGT00940000164876.a ENSGT00940000155188.B.b ENSGT00390000004950 ENSGT00550000074618.b ENSGT00500000044989 ENSGT00950000182850.a.b.b.a ENSGT00390000012859 ENSGT00950000182925.B.a ENSGT00940000156081.i ENSGT00940000154960 ENSGT00940000176961 ENSGT00390000002931 ENSGT00980000198657 ENSGT00610000087474 ENSGT00940000156837 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00940000154929.C Indian medaka MODERN SPECIES 754 ENSOMEG00000009200 ENSOMEG00000009229 ENSOMEG00000009267 ENSOMEG00000009290 mak16 (ENSOMEG00000009317) ENSOMEG00000009345 ENSOMEG00000009382 ENSOMEG00000009414 ENSOMEG00000009423 nudt18 (ENSOMEG00000009443) ENSOMEG00000009458 si:ch211-191j22.3 (ENSOMEG00000009470) ercc6l (ENSOMEG00000009481) ENSOMEG00000009489 ENSOMEG00000009500 ENSOMEG00000009736 ##22 ENSOMEG00000009814 ENSOMEG00000009825 Javanese ricefish MODERN SPECIES 23 ENSOJAG00000003858 ENSOJAG00000003921 ENSOJAG00000003936 srp19 (ENSOJAG00000003972) ENSOJAG00000003981 tncb (ENSOJAG00000004606) ENSOJAG00000007889 ENSOJAG00000007931 ENSOJAG00000008033 ENSOJAG00000002445 nudt18 (ENSOJAG00000002453) ENSOJAG00000002462 ENSOJAG00000002471 ercc6l (ENSOJAG00000002485) ENSOJAG00000002536 ENSOJAG00000002611 ##22 ENSOJAG00000002734 ENSOJAG00000002740 dapk1 (ENSOJAG00000002821) ENSOJAG00000003321 CNNM4 (ENSOJAG00000004395) ENSOJAG00000004431 ENSOJAG00000004449 h2az2b (ENSOJAG00000004467) purbb (ENSOJAG00000004556) hs3st1l2 (ENSOJAG00000004561) ENSOJAG00000004568 ENSOJAG00000004613 camk2b1 (ENSOJAG00000004833) ENSOJAG00000005691 zgc:101858 (ENSOJAG00000005977) Oryzias_a ANCESTRAL SPECIES 78 ENSGT00940000166629 ENSGT00900000140979.a.b ENSGT00950000183162.a.b.i.a ENSGT00530000063691.a ENSGT00950000182943 ENSGT00940000156317.w.b ENSGT00940000161917.b ENSGT00940000153424.a.b ENSGT00940000153321.b.b ENSGT00390000015513.a.a.b.c.a ENSGT00390000015513.a.b.a ENSGT00940000154886.b ##18 ENSGT00940000156489 #19 ENSGT00940000160420 #20 ENSGT00940000156282.a.a #21 ENSGT00940000154821.a.b ##22 ENSGT00940000156085 ENSGT01070000253744.b.b.e ENSGT00940000156290.a ENSGT00940000156035.z ENSGT00940000165677 ENSGT00940000156771.h ENSGT00940000159010 ENSGT00940000153189.A ENSGT00940000153710.a ENSGT00940000157986 ENSGT00390000018806 ENSGT00940000159671 ENSGT00940000165720 ENSGT00940000165775.a ENSGT00900000141033.a Japanese Medaka HdrR MODERN SPECIES 23 ENSORLG00000028379 h2az2b (ENSORLG00000024700) ENSORLG00000000222 ENSORLG00000000217 CNNM4 (ENSORLG00000030135) ENSORLG00000023385 dapk1 (ENSORLG00000020799) ctsla (ENSORLG00000020801) fbp2 (ENSORLG00000020804) fbp1a (ENSORLG00000020808) ENSORLG00000020812 ##18 dmrt1 (ENSORLG00000020817) #19 dmrt3a (ENSORLG00000024387) #20 dmrt2a (ENSORLG00000022893) #21 ENSORLG00000027960 SMARCA2 (ENSORLG00000020820) ##22 ENSORLG00000024946 adamts3 (ENSORLG00000022164) NPFFR2 (ENSORLG00000023530) ENSORLG00000027229 slc4a4a (ENSORLG00000019992) rufy3 (ENSORLG00000019933) grsf1 (ENSORLG00000030211) mapk1 (ENSORLG00000027138) ypel1 (ENSORLG00000025003) ppil2 (ENSORLG00000019912) stambpb (ENSORLG00000024507) ENSORLG00000023600 slc39a14 (ENSORLG00000019904) ascc2 (ENSORLG00000019896) ENSORLG00000023650 Chinese medaka DUPLICATION Chinese medaka MODERN SPECIES 3444 ENSOSIG00000013879 ##22 Chinese medaka MODERN SPECIES 3084 ENSOSIG00000009429 ##22 Elephant shark MODERN SPECIES 1509 tjp2a (ENSCMIG00000010132) #10 fxn (ENSCMIG00000010073) #11 ENSCMIG00000010059 ENSCMIG00000010049 unc45b (ENSCMIG00000009973) pgm5 (ENSCMIG00000009831) #14 foxd5 (ENSCMIG00000009768) cbwd (ENSCMIG00000009766) #16 ENSCMIG00000009762 DOCK8 (ENSCMIG00000009549) #17 KANK1 (ENSCMIG00000009393) #18 DMRT1 (ENSCMIG00000009384) #19 dmrt3a (ENSCMIG00000009382) #20 dmrt2a (ENSCMIG00000009380) #21 ENSCMIG00000009379 ENSCMIG00000009311 #22 ENSCMIG00000009053 #24 vldlr (ENSCMIG00000008511) #24 KCNV2 (ENSCMIG00000008387) #25 pum3 (ENSCMIG00000008286) #26 ENSCMIG00000008233 rfx3 (ENSCMIG00000008108) #27 GLIS3 (ENSCMIG00000008035) #28 ENSCMIG00000008032 ENSCMIG00000008018 #29 ENSCMIG00000008013 #30 ENSCMIG00000008011 plaa (ENSCMIG00000007998) CAAP1 (ENSCMIG00000007989) elavl2 (ENSCMIG00000007974) plin2 (ENSCMIG00000007964)