Rodentia_B	ANCESTRAL SPECIES	6	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Myomorpha	ANCESTRAL SPECIES	1	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Lesser Egyptian jerboa	MODERN SPECIES	50	Tjp2 (ENSJJAG00000003581) #7	Fxn (ENSJJAG00000022666) #8	Pip5k1b (ENSJJAG00000018154) #9	Fam122a (ENSJJAG00000009421) #10	Tmem252 (ENSJJAG00000015659) #11	Pgm5 (ENSJJAG00000022690) #12	ENSJJAG00000013817 #13	ENSJJAG00000009646 #14	ENSJJAG00000017231 #15	ENSJJAG00000015498 #16	Kank1 (ENSJJAG00000018774) #17	Dmrt1 (ENSJJAG00000016690) #18	Dmrt3 (ENSJJAG00000022573) #19	Dmrt2 (ENSJJAG00000023959) #20	ENSJJAG00000010719 #21	Smarca2 (ENSJJAG00000010867) #22	Vldlr (ENSJJAG00000016440) #23	ENSJJAG00000000409 #24	Kcnv2 (ENSJJAG00000016782) #25	Pum3 (ENSJJAG00000012563) #26	ENSJJAG00000010263 #27	Rfx3 (ENSJJAG00000010280) #28	ENSJJAG00000024335 #29	Glis3 (ENSJJAG00000011399) #30	Slc1a1 (ENSJJAG00000018507) #31	ENSJJAG00000020462 #32	Spata6l (ENSJJAG00000022941) #33	Plpp6 (ENSJJAG00000011277) #34	Cdc37l1 (ENSJJAG00000024330) #35	Ak3 (ENSJJAG00000023388) #36	ENSJJAG00000022803 #37
Muroidea	ANCESTRAL SPECIES	1	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Upper Galilee mountains blind mole rat	MODERN SPECIES	1166												Dmrt1 (ENSNGAG00000001295) #18	Dmrt3 (ENSNGAG00000020423) #19	Dmrt2 (ENSNGAG00000020041) #20	ENSNGAG00000013866	Smarca2 (ENSNGAG00000000108) #22	ENSNGAG00000012912	Vldlr (ENSNGAG00000003966) #23	Kcnv2 (ENSNGAG00000020439) #25	Pum3 (ENSNGAG00000019468) #26	Rfx3 (ENSNGAG00000016470) #28	Glis3 (ENSNGAG00000006111) #30	ENSNGAG00000018137 #32	Slc1a1 (ENSNGAG00000014723) #31	Plpp6 (ENSNGAG00000014756) #34	Spata6l (ENSNGAG00000017948) #33	Cdc37l1 (ENSNGAG00000018155) #35	Ak3 (ENSNGAG00000016647) #36	Rcl1 (ENSNGAG00000015327) #37	Jak2 (ENSNGAG00000000096)
Muroidea_A	ANCESTRAL SPECIES		ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Murinae	ANCESTRAL SPECIES		ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Mus	ANCESTRAL SPECIES		ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00900000143396	ENSGT00940000155460 #23	ENSGT00520000061590 #24	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640
Mus_A	ANCESTRAL SPECIES	16	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00900000143396	ENSGT00940000155460 #23	ENSGT00520000061590 #24	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640
Mus_B	ANCESTRAL SPECIES	16	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00900000143396	ENSGT00940000155460 #23	ENSGT00520000061590 #24	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640
Mus_C	ANCESTRAL SPECIES	24	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00900000143396	ENSGT00940000155460 #23	ENSGT00520000061590 #24	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640
Steppe mouse	MODERN SPECIES	3106																Smarca2 (ENSMSIG00000022131) #22	Gm815 (ENSMSIG00000023064)	Vldlr (ENSMSIG00000023084) #23	ENSMSIG00000023160 #24	Kcnv2 (ENSMSIG00000023184) #25	Pum3 (ENSMSIG00000023194) #26	Rfx3 (ENSMSIG00000023245) #28	ENSMSIG00000023373	Glis3 (ENSMSIG00000023382) #30
spretus	MODERN SPECIES	10	MGP_SPRETEiJ_G0023744	Apba1 (MGP_SPRETEiJ_G0023745)	Entrep1 (MGP_SPRETEiJ_G0023746)	Tjp2 (MGP_SPRETEiJ_G0023747) #7	Fxn (MGP_SPRETEiJ_G0023748) #8	Pip5k1b (MGP_SPRETEiJ_G0023749) #9	Fam122a (MGP_SPRETEiJ_G0023750) #10	Tmem252 (MGP_SPRETEiJ_G0023751) #11	Pgm5 (MGP_SPRETEiJ_G0023752) #12	Foxd4 (MGP_SPRETEiJ_G0023753)	Cbwd1 (MGP_SPRETEiJ_G0023754) #13	Dock8 (MGP_SPRETEiJ_G0023755) #16	Kank1 (MGP_SPRETEiJ_G0023756) #17	Dmrt3 (MGP_SPRETEiJ_G0023757) #19	Dmrt2 (MGP_SPRETEiJ_G0023758) #20	Smarca2 (MGP_SPRETEiJ_G0023759) #22	MGP_SPRETEiJ_G0023760	Vldlr (MGP_SPRETEiJ_G0023761) #23	Kcnv2 (MGP_SPRETEiJ_G0023762) #25	Pum3 (MGP_SPRETEiJ_G0023763) #26	Rfx3 (MGP_SPRETEiJ_G0023764) #28	Glis3 (MGP_SPRETEiJ_G0023765) #30	Slc1a1 (MGP_SPRETEiJ_G0023766) #31	Spata6l (MGP_SPRETEiJ_G0023767) #33	Plpp6 (MGP_SPRETEiJ_G0023768) #34	Cdc37l1 (MGP_SPRETEiJ_G0023769) #35	Ak3 (MGP_SPRETEiJ_G0023770) #36	Rcl1 (MGP_SPRETEiJ_G0023771) #37	Jak2 (MGP_SPRETEiJ_G0023772)	Insl6 (MGP_SPRETEiJ_G0023773)	Rln1 (MGP_SPRETEiJ_G0023774)
Mouse	MODERN SPECIES	10	Entrep1 (ENSMUSG00000071604)	Tjp2 (ENSMUSG00000024812) #7	Fxn (ENSMUSG00000059363) #8	Pip5k1b (ENSMUSG00000024867) #9	Fam122a (ENSMUSG00000074922) #10	Tmem252 (ENSMUSG00000048572) #11	Pgm5 (ENSMUSG00000041731) #12	Gm10053 (ENSMUSG00000058927)	Foxd4 (ENSMUSG00000051490)	Cbwd1 (ENSMUSG00000024878) #13	Dock8 (ENSMUSG00000052085) #16	Kank1 (ENSMUSG00000032702) #17	Dmrt1 (ENSMUSG00000024837) #18	Dmrt3 (ENSMUSG00000042372) #19	Dmrt2 (ENSMUSG00000048138) #20	Smarca2 (ENSMUSG00000024921) #22	Gm815 (ENSMUSG00000074913)	Vldlr (ENSMUSG00000024924) #23	Kcnv2 (ENSMUSG00000047298) #25	Pum3 (ENSMUSG00000041360) #26	Rfx3 (ENSMUSG00000040929) #28	Glis3 (ENSMUSG00000052942) #30	Slc1a1 (ENSMUSG00000024935) #31	Spata6l (ENSMUSG00000064202) #33	Plpp6 (ENSMUSG00000040105) #34	Cdc37l1 (ENSMUSG00000024780) #35	Ak3 (ENSMUSG00000024782) #36	Rcl1 (ENSMUSG00000024785) #37	Jak2 (ENSMUSG00000024789)	Insl6 (ENSMUSG00000050957)	Rln1 (ENSMUSG00000039097)
Ryukyu mouse	MODERN SPECIES	10	Apba1 (MGP_CAROLIEiJ_G0022826)	Entrep1 (MGP_CAROLIEiJ_G0022827)	Tjp2 (MGP_CAROLIEiJ_G0022828) #7	Fxn (MGP_CAROLIEiJ_G0022829) #8	Pip5k1b (MGP_CAROLIEiJ_G0022830) #9	Fam122a (MGP_CAROLIEiJ_G0022831) #10	Tmem252 (MGP_CAROLIEiJ_G0022832) #11	Pgm5 (MGP_CAROLIEiJ_G0022833) #12	Foxd4 (MGP_CAROLIEiJ_G0022834)	Cbwd1 (MGP_CAROLIEiJ_G0022835) #13	Dock8 (MGP_CAROLIEiJ_G0022836) #16	Kank1 (MGP_CAROLIEiJ_G0022837) #17	Dmrt1 (MGP_CAROLIEiJ_G0022838) #18	Dmrt3 (MGP_CAROLIEiJ_G0022839) #19	Dmrt2 (MGP_CAROLIEiJ_G0022840) #20	Smarca2 (MGP_CAROLIEiJ_G0022841) #22	MGP_CAROLIEiJ_G0022842	Vldlr (MGP_CAROLIEiJ_G0022843) #23	Kcnv2 (MGP_CAROLIEiJ_G0022844) #25	Pum3 (MGP_CAROLIEiJ_G0022845) #26	Rfx3 (MGP_CAROLIEiJ_G0022846) #28	Glis3 (MGP_CAROLIEiJ_G0022847) #30	Slc1a1 (MGP_CAROLIEiJ_G0022848) #31	Spata6l (MGP_CAROLIEiJ_G0022849) #33	Plpp6 (MGP_CAROLIEiJ_G0022850) #34	Cdc37l1 (MGP_CAROLIEiJ_G0022851) #35	Ak3 (MGP_CAROLIEiJ_G0022852) #36	Rcl1 (MGP_CAROLIEiJ_G0022853) #37	Jak2 (MGP_CAROLIEiJ_G0022854)	Insl6 (MGP_CAROLIEiJ_G0022855)	Rln1 (MGP_CAROLIEiJ_G0022856)
Shrew mouse	MODERN SPECIES		Ptar1 (MGP_PahariEiJ_G0014318)	Apba1 (MGP_PahariEiJ_G0014319)	Entrep1 (MGP_PahariEiJ_G0014320)	Tjp2 (MGP_PahariEiJ_G0014321) #7	MGP_PahariEiJ_G0014322 #8	Fam122a (MGP_PahariEiJ_G0014324) #10	Tmem252 (MGP_PahariEiJ_G0014325) #11	Pgm5 (MGP_PahariEiJ_G0014326) #12	Foxd4 (MGP_PahariEiJ_G0014327)	Cbwd1 (MGP_PahariEiJ_G0014328) #13	Dock8 (MGP_PahariEiJ_G0014329) #16	Kank1 (MGP_PahariEiJ_G0014330) #17	Dmrt1 (MGP_PahariEiJ_G0014331) #18	Dmrt3 (MGP_PahariEiJ_G0014332) #19	Dmrt2 (MGP_PahariEiJ_G0014333) #20	Smarca2 (MGP_PahariEiJ_G0014334) #22	MGP_PahariEiJ_G0014335	Vldlr (MGP_PahariEiJ_G0014336) #23	Kcnv2 (MGP_PahariEiJ_G0014337) #25	Pum3 (MGP_PahariEiJ_G0014338) #26	Rfx3 (MGP_PahariEiJ_G0014339) #28	Glis3 (MGP_PahariEiJ_G0014340) #30	Slc1a1 (MGP_PahariEiJ_G0014341) #31	Spata6l (MGP_PahariEiJ_G0014342) #33	Plpp6 (MGP_PahariEiJ_G0014343) #34	Cdc37l1 (MGP_PahariEiJ_G0014344) #35	Ak3 (MGP_PahariEiJ_G0014345) #36	Rcl1 (MGP_PahariEiJ_G0014346) #37	Jak2 (MGP_PahariEiJ_G0014347)	Insl6 (MGP_PahariEiJ_G0014348)	Rln1 (MGP_PahariEiJ_G0014349)
Rat	MODERN SPECIES		Tjp2 (ENSRNOG00000015030) #7	Fxn (ENSRNOG00000015213) #8	Pip5k1b (ENSRNOG00000015232) #9	Pabir1 (ENSRNOG00000051051) #10	Tmem252 (ENSRNOG00000025476) #11	Pgm5 (ENSRNOG00000015406) #12	Foxd4 (ENSRNOG00000050486)	Zng1a (ENSRNOG00000015516) #13	Dock8 (ENSRNOG00000015894) #16	Hmgb1-ps4 (ENSRNOG00000065098)	Kank1 (ENSRNOG00000016023) #17	Dmrt1 (ENSRNOG00000016075) #18	Dmrt3 (ENSRNOG00000016284) #19	Dmrt2 (ENSRNOG00000016301) #20	ENSRNOG00000062555	Smarca2 (ENSRNOG00000011931) #22	ENSRNOG00000069446 #24	Vldlr (ENSRNOG00000027491) #23	ENSRNOG00000062591	Kcnv2 (ENSRNOG00000012566) #25	Pum3 (ENSRNOG00000012574) #26	Rfx3 (ENSRNOG00000014486) #28	ENSRNOG00000066761	Glis3 (ENSRNOG00000014768) #30	Slc1a1 (ENSRNOG00000014816) #31	ENSRNOG00000065811 #32	Spata6l (ENSRNOG00000015137) #33	Plpp6 (ENSRNOG00000015268) #34	RGD1565057 (ENSRNOG00000069618)	Cdc37l1 (ENSRNOG00000010967) #35	Ak3 (ENSRNOG00000052506) #36
Cricetidae	ANCESTRAL SPECIES	1	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Cricetidae_B	ANCESTRAL SPECIES	1	ENSGT00390000017892	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Northern American deer mouse	MODERN SPECIES		Ptar1 (ENSPEMG00000018036)	Apba1 (ENSPEMG00000010980)	Entrep1 (ENSPEMG00000020060)	Tjp2 (ENSPEMG00000020250) #7	ENSPEMG00000019884 #8	Pip5k1b (ENSPEMG00000020095) #9	Fam122a (ENSPEMG00000012823) #10	Tmem252 (ENSPEMG00000007137) #11	Pgm5 (ENSPEMG00000020205) #12	Cbwd1 (ENSPEMG00000000396) #13	Dock8 (ENSPEMG00000014001) #16	Kank1 (ENSPEMG00000013916) #17	Dmrt1 (ENSPEMG00000019943) #18	Dmrt3 (ENSPEMG00000019990) #19	Dmrt2 (ENSPEMG00000019767) #20	Smarca2 (ENSPEMG00000019821) #22	ENSPEMG00000021666 #24	Vldlr (ENSPEMG00000022250) #23	Kcnv2 (ENSPEMG00000020138) #25	ENSPEMG00000030423	ENSPEMG00000019340 #26	Rfx3 (ENSPEMG00000019731) #28	Glis3 (ENSPEMG00000020002) #30	ENSPEMG00000004286	Slc1a1 (ENSPEMG00000009611) #31	ENSPEMG00000021571 #32	Spata6l (ENSPEMG00000023122) #33	Plpp6 (ENSPEMG00000007181) #34	Cdc37l1 (ENSPEMG00000000344) #35	Ak3 (ENSPEMG00000022781) #36	Rcl1 (ENSPEMG00000023275) #37
Prairie vole	MODERN SPECIES	16	Apba1 (ENSMOCG00000009892)	Entrep1 (ENSMOCG00000018310)	Tjp2 (ENSMOCG00000012468) #7	Fxn (ENSMOCG00000014625) #8	Pip5k1b (ENSMOCG00000017594) #9	ENSMOCG00000010285	Fam122a (ENSMOCG00000001051) #10	Tmem252 (ENSMOCG00000017938) #11	Pgm5 (ENSMOCG00000011710) #12	Cbwd1 (ENSMOCG00000015974) #13	Dock8 (ENSMOCG00000014249) #16	Kank1 (ENSMOCG00000020725) #17	ENSMOCG00000017971 #18	Dmrt3 (ENSMOCG00000015270) #19	Dmrt2 (ENSMOCG00000016701) #20	Smarca2 (ENSMOCG00000001611) #22	Vldlr (ENSMOCG00000004269) #23	Kcnv2 (ENSMOCG00000014872) #25	ENSMOCG00000019519 #26	Rfx3 (ENSMOCG00000018931) #28	Glis3 (ENSMOCG00000009953) #30	Slc1a1 (ENSMOCG00000017507) #31	ENSMOCG00000018225 #32	Spata6l (ENSMOCG00000022082) #33	Plpp6 (ENSMOCG00000001135) #34	Cdc37l1 (ENSMOCG00000018341) #35	Ak3 (ENSMOCG00000010856) #36	Rcl1 (ENSMOCG00000012145) #37	Jak2 (ENSMOCG00000013580)	Insl6 (ENSMOCG00000015208)	Rln1 (ENSMOCG00000012108)
Cricetinae	ANCESTRAL SPECIES	2	ENSGT00940000156820.a.a	ENSGT00530000063335.B.a.b	ENSGT00940000158634 #7	ENSGT00390000005811 #8	ENSGT00940000156639 #9	ENSGT00390000015476.d.b #10	ENSGT00390000005250 #11	ENSGT00940000158126 #12	ENSGT00940000163353	ENSGT00640000091523 #13	ENSGT00940000155876 #16	ENSGT00940000154886.a.a #17	ENSGT00940000156489.n #18	ENSGT00940000160420 #19	ENSGT00940000156282.a.a #20	ENSGT00940000154821.b #22	ENSGT00520000061590 #24	ENSGT00940000155460 #23	ENSGT00940000157438 #25	ENSGT00390000015757 #26	ENSGT01050000244879.a.a.b #28	ENSGT00940000156896 #30	ENSGT00940000155397.b #31	ENSGT00900000143153 #32	ENSGT00530000063821.b.b #33	ENSGT00940000160907 #34	ENSGT00390000013443.d #35	ENSGT00940000155120 #36	ENSGT00530000063404.a #37	ENSGT00940000155640	ENSGT00940000154434.b
Chinese hamster chok1gshd	MODERN SPECIES	401	Entrep1 (ENSCGRG00001002309)	Tjp2 (ENSCGRG00001022408) #7	Fxn (ENSCGRG00001003906) #8	ENSCGRG00001013409	Pip5k1b (ENSCGRG00001017408) #9	Fam122a (ENSCGRG00001012685) #10	Tmem252 (ENSCGRG00001019081) #11	Pgm5 (ENSCGRG00001020037) #12	Foxd4 (ENSCGRG00001006276)	Cbwd1 (ENSCGRG00001020851) #13	Dock8 (ENSCGRG00001013079) #16	Kank1 (ENSCGRG00001020355) #17	Dmrt1 (ENSCGRG00001000625) #18	Dmrt3 (ENSCGRG00001005036) #19	Dmrt2 (ENSCGRG00001007562) #20	Smarca2 (ENSCGRG00001002323) #22	Vldlr (ENSCGRG00001014399) #23	ENSCGRG00001017895 #24	Kcnv2 (ENSCGRG00001018140) #25	Pum3 (ENSCGRG00001016402) #26	Rfx3 (ENSCGRG00001021745) #28	Glis3 (ENSCGRG00001014233) #30	Slc1a1 (ENSCGRG00001022336) #31	ENSCGRG00001023585 #32	Spata6l (ENSCGRG00001002881) #33	Plpp6 (ENSCGRG00001012981) #34	Cdc37l1 (ENSCGRG00001000264) #35	AK3 (ENSCGRG00001007296) #36	Rcl1 (ENSCGRG00001013748) #37	Jak2 (ENSCGRG00001015840)	Insl6 (ENSCGRG00001020673)
Golden Hamster	DUPLICATION
Golden Hamster	DUPLICATION
Golden Hamster	MODERN SPECIES	617	Tjp2 (ENSMAUG00000008987) #7	Fxn (ENSMAUG00000009158) #8	Pip5k1b (ENSMAUG00000010912) #9	Fam122a (ENSMAUG00000002386) #10	Tmem252 (ENSMAUG00000008962) #11	Pgm5 (ENSMAUG00000009185) #12	Cbwd1 (ENSMAUG00000009107) #13	ENSMAUG00000009538 #16	ENSMAUG00000009191 #16	Kank1 (ENSMAUG00000009263) #17	ENSMAUG00000008975 #18	Dmrt3 (ENSMAUG00000008904) #19	Dmrt2 (ENSMAUG00000010038) #20	ENSMAUG00000010070 #22	ENSMAUG00000008807 #22	ENSMAUG00000008613 #22	ENSMAUG00000008768	Kcnv2 (ENSMAUG00000008727) #25	Pum3 (ENSMAUG00000009733) #26	Rfx3 (ENSMAUG00000009987) #28	Slc1a1 (ENSMAUG00000009046) #31	Plpp6 (ENSMAUG00000001915) #34	Spata6l (ENSMAUG00000010530) #33	Cdc37l1 (ENSMAUG00000008847) #35	Ak3 (ENSMAUG00000008253) #36	Rcl1 (ENSMAUG00000008922) #37	Jak2 (ENSMAUG00000008571)	Insl6 (ENSMAUG00000008553)	Rln1 (ENSMAUG00000008598)	Plgrkt (ENSMAUG00000007601)	Cd274 (ENSMAUG00000008788)
Golden Hamster	MODERN SPECIES	617	Entrep1 (ENSMAUG00000010196)	Tjp2 (ENSMAUG00000008987) #7	Fxn (ENSMAUG00000009158) #8	Pip5k1b (ENSMAUG00000010912) #9	Fam122a (ENSMAUG00000002386) #10	Tmem252 (ENSMAUG00000008962) #11	Pgm5 (ENSMAUG00000009185) #12	Cbwd1 (ENSMAUG00000009107) #13	ENSMAUG00000009538 #16	ENSMAUG00000009191 #16	Kank1 (ENSMAUG00000009263) #17	ENSMAUG00000008975 #18	Dmrt3 (ENSMAUG00000008904) #19	Dmrt2 (ENSMAUG00000010038) #20	ENSMAUG00000010070 #22	ENSMAUG00000008807 #22	ENSMAUG00000008613 #22	ENSMAUG00000008768	Kcnv2 (ENSMAUG00000008727) #25	Pum3 (ENSMAUG00000009733) #26	Rfx3 (ENSMAUG00000009987) #28	Slc1a1 (ENSMAUG00000009046) #31	Plpp6 (ENSMAUG00000001915) #34	Spata6l (ENSMAUG00000010530) #33	Cdc37l1 (ENSMAUG00000008847) #35	Ak3 (ENSMAUG00000008253) #36	Rcl1 (ENSMAUG00000008922) #37	Jak2 (ENSMAUG00000008571)	Insl6 (ENSMAUG00000008553)	Rln1 (ENSMAUG00000008598)	Plgrkt (ENSMAUG00000007601)
Golden Hamster	MODERN SPECIES	617	Apba1 (ENSMAUG00000009290)	Entrep1 (ENSMAUG00000010196)	Tjp2 (ENSMAUG00000008987) #7	Fxn (ENSMAUG00000009158) #8	Pip5k1b (ENSMAUG00000010912) #9	Fam122a (ENSMAUG00000002386) #10	Tmem252 (ENSMAUG00000008962) #11	Pgm5 (ENSMAUG00000009185) #12	Cbwd1 (ENSMAUG00000009107) #13	ENSMAUG00000009538 #16	ENSMAUG00000009191 #16	Kank1 (ENSMAUG00000009263) #17	ENSMAUG00000008975 #18	Dmrt3 (ENSMAUG00000008904) #19	Dmrt2 (ENSMAUG00000010038) #20	ENSMAUG00000010070 #22	ENSMAUG00000008807 #22	ENSMAUG00000008613 #22	ENSMAUG00000008768	Kcnv2 (ENSMAUG00000008727) #25	Pum3 (ENSMAUG00000009733) #26	Rfx3 (ENSMAUG00000009987) #28	Slc1a1 (ENSMAUG00000009046) #31	Plpp6 (ENSMAUG00000001915) #34	Spata6l (ENSMAUG00000010530) #33	Cdc37l1 (ENSMAUG00000008847) #35	Ak3 (ENSMAUG00000008253) #36	Rcl1 (ENSMAUG00000008922) #37	Jak2 (ENSMAUG00000008571)	Insl6 (ENSMAUG00000008553)	Rln1 (ENSMAUG00000008598)
Kangaroo rat	MODERN SPECIES	359	Mamdc2 (ENSDORG00000000884)	Ptar1 (ENSDORG00000005855)	Apba1 (ENSDORG00000003149)	Entrep1 (ENSDORG00000001566)	Tjp2 (ENSDORG00000009039) #7	Fxn (ENSDORG00000027975) #8	Pip5k1b (ENSDORG00000001153) #9	Fam122a (ENSDORG00000001152) #10	Tmem252 (ENSDORG00000005477) #11	Pgm5 (ENSDORG00000005476) #12	Cbwd1 (ENSDORG00000004917) #13	Dock8 (ENSDORG00000007203) #16	Kank1 (ENSDORG00000015159) #17	ENSDORG00000006363 #18	Dmrt2 (ENSDORG00000007216) #20	Smarca2 (ENSDORG00000014832) #22	Vldlr (ENSDORG00000012954) #23	Kcnv2 (ENSDORG00000011511) #25	ENSDORG00000003628 #26	Rfx3 (ENSDORG00000013906) #28	ENSDORG00000025494 #30	Slc1a1 (ENSDORG00000010091) #31	Plpp6 (ENSDORG00000003071) #34	Cdc37l1 (ENSDORG00000023648) #35	Ak3 (ENSDORG00000010355) #36	Rcl1 (ENSDORG00000015645) #37	Jak2 (ENSDORG00000011552)	ENSDORG00000000109	ENSDORG00000028062