Fungi/Metazoa group	ANCESTRAL SPECIES																	ENSGT00950000182787.A #22
Bilateria	ANCESTRAL SPECIES																	ENSGT00950000182787.A #22
Chordata	ANCESTRAL SPECIES																	ENSGT00950000182787.A #22
Vertebrata	ANCESTRAL SPECIES																	ENSGT00950000182787.A #22
Gnathostomata	ANCESTRAL SPECIES																	ENSGT00950000182787.A #22
Euteleostomi	ANCESTRAL SPECIES	133	ENSGT00390000008787.b	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00500000044903	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000116794	ENSGT00740000115593	ENSGT00860000134673	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8
Sarcopterygii	ANCESTRAL SPECIES	93	ENSGT00900000140979.a.a	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00500000044903	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000116794	ENSGT00740000115593	ENSGT00860000134673	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00940000155043 #15	ENSGT00520000055589.c #12	ENSGT00530000063672.a #11	ENSGT00940000166192	ENSGT00940000158935 #10	ENSGT00940000157520 #9	ENSGT00780000122010 #8
Tetrapoda	ANCESTRAL SPECIES	99	ENSGT00390000008787.b	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00500000044903	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00520000055589.c #12	ENSGT00530000063672.a #11	ENSGT00940000158935 #10	ENSGT00940000157520 #9	ENSGT00780000122010 #8
Amniota	ANCESTRAL SPECIES	10	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000170705	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT01000000215701	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.f	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000155245	ENSGT00940000163256
Mammalia	ANCESTRAL SPECIES	34	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Theria	ANCESTRAL SPECIES	21	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Eutheria	ANCESTRAL SPECIES	13	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Boreoeutheria	ANCESTRAL SPECIES	16	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Euarchontoglires	ANCESTRAL SPECIES	16	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Primates	ANCESTRAL SPECIES	16	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276.x.a #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Haplorrhini	ANCESTRAL SPECIES	11	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00980000202026
Simiiformes	ANCESTRAL SPECIES	17	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a ##32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k	ENSGT00980000202026
Catarrhini	ANCESTRAL SPECIES	18	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b
Cercopithecidae	ANCESTRAL SPECIES	15	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00910000146854.a #20	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b
Cercopithecinae	ANCESTRAL SPECIES	15	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00910000146854.a #20	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.l ##34	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37
Cercopithecinae_a	ANCESTRAL SPECIES	14	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00910000146854.a #20	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b
Cercopithecinae_b	ANCESTRAL SPECIES	14	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00910000146854.a #20	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b
Cercopithecinae_d	ANCESTRAL SPECIES	39	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00910000146854.a #20	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT00940000164233.b #35	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b
Sooty mangabey	MODERN SPECIES	260	RUFY2 (ENSCATG00000040524) #7	DNA2 (ENSCATG00000033971) #8	SLC25A16 (ENSCATG00000013420) #9	TET1 (ENSCATG00000035751) #10	CCAR1 (ENSCATG00000042598) #11	STOX1 (ENSCATG00000035977) #12	ENSCATG00000015371 #13	DDX50 (ENSCATG00000032463) #14	DDX21 (ENSCATG00000043540) #15	KIFBP (ENSCATG00000041656) #16	SRGN (ENSCATG00000035817) #17	VPS26A (ENSCATG00000037809) #18	SUPV3L1 (ENSCATG00000030043) #19	ENSCATG00000003950 #20	HKDC1 (ENSCATG00000044791) #21	HK1 (ENSCATG00000045218) #22	TACR2 (ENSCATG00000029404) #23	ENSCATG00000037469 #24	TSPAN15 (ENSCATG00000045235) #25	FAM241B (ENSCATG00000031648) #26	ENSCATG00000041790 #27	COL13A1 (ENSCATG00000042286) #28	MACROH2A2 (ENSCATG00000017786) #29	AIFM2 (ENSCATG00000040105) #30	TYSND1 (ENSCATG00000044480) #31	ENSCATG00000039017 #32	ENSCATG00000042578 #33	PPA1 (ENSCATG00000022364) #34	ENSCATG00000029578 #35	NPFFR1 (ENSCATG00000045000) #36	LRRC20 (ENSCATG00000013053) #37
Drill	MODERN SPECIES	1058								DDX50 (ENSMLEG00000037313) #14	DDX21 (ENSMLEG00000028940) #15	KIFBP (ENSMLEG00000042938) #16	SRGN (ENSMLEG00000034577) #17	VPS26A (ENSMLEG00000028974) #18	SUPV3L1 (ENSMLEG00000028551) #19	ENSMLEG00000031682 #20	HKDC1 (ENSMLEG00000022724) #21	HK1 (ENSMLEG00000030243) #22	TACR2 (ENSMLEG00000039108) #23	ENSMLEG00000035754 #24	TSPAN15 (ENSMLEG00000027053) #25	FAM241B (ENSMLEG00000024095) #26	ENSMLEG00000044294 #27	COL13A1 (ENSMLEG00000041796) #28	MACROH2A2 (ENSMLEG00000031598) #29	AIFM2 (ENSMLEG00000039185) #30	ENSMLEG00000037528 #32	ENSMLEG00000043316 #33	PPA1 (ENSMLEG00000042677) #34	ENSMLEG00000039663 #35	NPFFR1 (ENSMLEG00000040395) #36	LRRC20 (ENSMLEG00000031698) #37	ENSMLEG00000034679
Olive baboon	MODERN SPECIES	2	PBLD (ENSPANG00000022106)	HNRNPH3 (ENSPANG00000022105)	RUFY2 (ENSPANG00000022103) #7	DNA2 (ENSPANG00000022119) #8	SLC25A16 (ENSPANG00000022117) #9	TET1 (ENSPANG00000022122) #10	ENSPANG00000022123 #11	ENSPANG00000047692 #12	ENSPANG00000045573 #12	DDX21 (ENSPANG00000022140) #15	ENSPANG00000022139 #16	SRGN (ENSPANG00000037784) #17	VPS26A (ENSPANG00000022152) #18	SUPV3L1 (ENSPANG00000022168) #19	HKDC1 (ENSPANG00000022166) #21	HK1 (ENSPANG00000022165) #22	TACR2 (ENSPANG00000022163) #23	TSPAN15 (ENSPANG00000022162) #25	NEUROG3 (ENSPANG00000040225)	ENSPANG00000039279 #26	COL13A1 (ENSPANG00000022178) #28	MACROH2A2 (ENSPANG00000022173) #29	AIFM2 (ENSPANG00000022172) #30	TYSND1 (ENSPANG00000022248) #31	ENSPANG00000022249 #32	PPA1 (ENSPANG00000022268) #34	NPFFR1 (ENSPANG00000022264) #36	LRRC20 (ENSPANG00000022262) #37	EIF4EBP2 (ENSPANG00000048755)	NODAL (ENSPANG00000022260)	PALD1 (ENSPANG00000022258)
Macaca	ANCESTRAL SPECIES	11	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b
Macaca_a	ANCESTRAL SPECIES	13	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT01100000263493.a.a.a.b.a.a.b.a.b.a.b.a.a.a.a.b.a.b	ENSGT00940000155342.k.b
Crab-eating macaque	MODERN SPECIES	19	RUFY2 (ENSMFAG00000008200) #7	DNA2 (ENSMFAG00000036094) #8	SLC25A16 (ENSMFAG00000059947) #9	TET1 (ENSMFAG00000044392) #10	CCAR1 (ENSMFAG00000035410) #11	STOX1 (ENSMFAG00000033672) #12	ENSMFAG00000052995	DDX50 (ENSMFAG00000044067) #14	DDX21 (ENSMFAG00000044838) #15	KIFBP (ENSMFAG00000044367) #16	ENSMFAG00000050001	SRGN (ENSMFAG00000040348) #17	VPS26A (ENSMFAG00000042937) #18	SUPV3L1 (ENSMFAG00000003566) #19	HKDC1 (ENSMFAG00000044430) #21	HK1 (ENSMFAG00000036059) #22	TACR2 (ENSMFAG00000045771) #23	TSPAN15 (ENSMFAG00000043589) #25	FAM241B (ENSMFAG00000032357) #26	ENSMFAG00000054348 #27	ENSMFAG00000054268	COL13A1 (ENSMFAG00000038649) #28	MACROH2A2 (ENSMFAG00000035957) #29	AIFM2 (ENSMFAG00000004041) #30	TYSND1 (ENSMFAG00000040775) #31	ENSMFAG00000039894 #32	PPA1 (ENSMFAG00000043098) #34	NPFFR1 (ENSMFAG00000043253) #36	LRRC20 (ENSMFAG00000041994) #37	ENSMFAG00000057854	EIF4EBP2 (ENSMFAG00000000143)
Rhesus	MODERN SPECIES	19	ENSMMUG00000015130	PBLD (ENSMMUG00000015125)	HNRNPH3 (ENSMMUG00000009792)	RUFY2 (ENSMMUG00000019703) #7	DNA2 (ENSMMUG00000030532) #8	TET1 (ENSMMUG00000023198) #10	CCAR1 (ENSMMUG00000016652) #11	STOX1 (ENSMMUG00000000826) #12	DDX50 (ENSMMUG00000001006) #14	KIFBP (ENSMMUG00000008985) #15	SRGN (ENSMMUG00000037735) #17	VPS26A (ENSMMUG00000004101) #18	SUPV3L1 (ENSMMUG00000052636) #19	HKDC1 (ENSMMUG00000003849) #21	ENSMMUG00000054629	HK1 (ENSMMUG00000015302) #22	TACR2 (ENSMMUG00000015310) #23	TSPAN15 (ENSMMUG00000015314) #25	NEUROG3 (ENSMMUG00000008956)	FAM241B (ENSMMUG00000016240) #26	COL13A1 (ENSMMUG00000005716) #28	MACROH2A2 (ENSMMUG00000006395) #29	AIFM2 (ENSMMUG00000006392) #30	TYSND1 (ENSMMUG00000006391) #31	SAR1A (ENSMMUG00000041491) #32	PPA1 (ENSMMUG00000006397) #34	NPFFR1 (ENSMMUG00000005367) #36	LRRC20 (ENSMMUG00000014846) #37	ENSMMUG00000056761	EIF4EBP2 (ENSMMUG00000055936)	ENSMMUG00000054067
Pig-tailed macaque	MODERN SPECIES	353	PBLD (ENSMNEG00000039767)	HNRNPH3 (ENSMNEG00000038866)	RUFY2 (ENSMNEG00000039838) #7	DNA2 (ENSMNEG00000027893) #8	SLC25A16 (ENSMNEG00000041166) #9	TET1 (ENSMNEG00000043829) #10	CCAR1 (ENSMNEG00000009193) #11	STOX1 (ENSMNEG00000030759) #12	DDX50 (ENSMNEG00000031664) #14	DDX21 (ENSMNEG00000032825) #15	KIFBP (ENSMNEG00000028274) #16	SRGN (ENSMNEG00000028902) #17	VPS26A (ENSMNEG00000039163) #18	SUPV3L1 (ENSMNEG00000016010) #19	HKDC1 (ENSMNEG00000041310) #21	HK1 (ENSMNEG00000028354) #22	TACR2 (ENSMNEG00000036480) #23	ENSMNEG00000034967 #24	TSPAN15 (ENSMNEG00000011551) #25	FAM241B (ENSMNEG00000038490) #26	ENSMNEG00000042846 #27	COL13A1 (ENSMNEG00000042505) #28	MACROH2A2 (ENSMNEG00000040382) #29	AIFM2 (ENSMNEG00000043788) #30	TYSND1 (ENSMNEG00000044925) #31	ENSMNEG00000030362 #32	ENSMNEG00000038291 #35	PPA1 (ENSMNEG00000039051) #34	NPFFR1 (ENSMNEG00000043557) #36	LRRC20 (ENSMNEG00000028501) #37	EIF4EBP2 (ENSMNEG00000032389)
Vervet Monkey	MODERN SPECIES	28	RUFY2 (ENSCSAG00000007581) #7	DNA2 (ENSCSAG00000007597) #8	SLC25A16 (ENSCSAG00000007606) #9	TET1 (ENSCSAG00000007633) #10	CCAR1 (ENSCSAG00000007643) #11	STOX1 (ENSCSAG00000007651) #12	ENSCSAG00000007655	ENSCSAG00000007664	DDX50 (ENSCSAG00000007703) #14	ENSCSAG00000007762	KIFBP (ENSCSAG00000007785) #16	SRGN (ENSCSAG00000007791) #17	VPS26A (ENSCSAG00000007798) #18	SUPV3L1 (ENSCSAG00000007811) #19	HKDC1 (ENSCSAG00000007877) #21	HK1 (ENSCSAG00000007913) #22	TACR2 (ENSCSAG00000007927) #23	TSPAN15 (ENSCSAG00000007934) #25	NEUROG3 (ENSCSAG00000018431)	FAM241B (ENSCSAG00000007942) #26	ENSCSAG00000007948 #27	COL13A1 (ENSCSAG00000008138) #28	MACROH2A2 (ENSCSAG00000008238) #29	AIFM2 (ENSCSAG00000008248) #30	TYSND1 (ENSCSAG00000008256) #31	ENSCSAG00000008263 #32	PPA1 (ENSCSAG00000008269) ##34	ENSCSAG00000018430 #35	NPFFR1 (ENSCSAG00000008280) #36	LRRC20 (ENSCSAG00000008285) #37	EIF4EBP2 (ENSCSAG00000008294)
Rhinopithecus	ANCESTRAL SPECIES	50								ENSGT00940000155901.b ##14	ENSGT00940000155043.k #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00910000146854.a #20	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.b #32	ENSGT00390000017004.a.b.m.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.k.b	ENSGT00940000160223
Black snub-nosed monkey	MODERN SPECIES	443	HIVEP3 (ENSRBIG00000032985)	GUCA2B (ENSRBIG00000016693)	GUCA2A (ENSRBIG00000005852)	FOXJ3 (ENSRBIG00000029803)	RIMKLA (ENSRBIG00000038553)	ZMYND12 (ENSRBIG00000028691)	PPCS (ENSRBIG00000031175)	ENSRBIG00000031979	ENSRBIG00000021392	CCDC30 (ENSRBIG00000036949)	PPIH (ENSRBIG00000044851)	ENSRBIG00000035792	CLDN19 (ENSRBIG00000037856)	P3H1 (ENSRBIG00000034851)	HKDC1 (ENSRBIG00000027725) #21	HK1 (ENSRBIG00000041955) #22	TACR2 (ENSRBIG00000044764) #23	ENSRBIG00000039585 #24	TSPAN15 (ENSRBIG00000027537) #25	ENSRBIG00000008898	FAM241B (ENSRBIG00000032853) #26	ENSRBIG00000039926 #27	COL13A1 (ENSRBIG00000044467) #28	MACROH2A2 (ENSRBIG00000037767) #29	AIFM2 (ENSRBIG00000034212) #30	TYSND1 (ENSRBIG00000033276) #31	ENSRBIG00000031590 #32	PPA1 (ENSRBIG00000038632) #34	NPFFR1 (ENSRBIG00000028280) #36	ENSRBIG00000026990	LRRC20 (ENSRBIG00000037874) #37
Golden snub-nosed monkey	MODERN SPECIES	1042							DDX50 (ENSRROG00000032158) #14	DDX21 (ENSRROG00000033387) #15	KIFBP (ENSRROG00000036352) #16	SRGN (ENSRROG00000026739) #17	VPS26A (ENSRROG00000006745) #18	ENSRROG00000020883	SUPV3L1 (ENSRROG00000000787) #19	ENSRROG00000036783 #20	HKDC1 (ENSRROG00000035672) #21	HK1 (ENSRROG00000018211) #22	TACR2 (ENSRROG00000040015) #23	ENSRROG00000013667 #24	TSPAN15 (ENSRROG00000017826) #25	ENSRROG00000023405	ENSRROG00000012628	FAM241B (ENSRROG00000035227) #26	ENSRROG00000045424 #27	COL13A1 (ENSRROG00000018038) #28	MACROH2A2 (ENSRROG00000038749) #29	AIFM2 (ENSRROG00000030811) #30	TYSND1 (ENSRROG00000003155) #31	ENSRROG00000044164 #32	PPA1 (ENSRROG00000041730) #34	NPFFR1 (ENSRROG00000020856) #36	LRRC20 (ENSRROG00000033880) #37
Hominoidea	ANCESTRAL SPECIES	11	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.t.a #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a.a ##32	ENSGT00390000017004.a.b.m.a.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00530000063695.b.b
Hominidae	ANCESTRAL SPECIES	13	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.t.a #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a.a ##32	ENSGT00390000017004.a.b.m.a.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00530000063695.b.b
Homo/Pan/Gorilla group	ANCESTRAL SPECIES	17	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.t.a #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a.a ##32	ENSGT00390000017004.a.b.m.a.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00530000063695.b.a.b
Homo/Pan group	ANCESTRAL SPECIES	18	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.t.a #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a.a ##32	ENSGT00390000017004.a.b.m.a.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00530000063695.b.a.b
Pan	ANCESTRAL SPECIES	16	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.t.a #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000159720.w.a #24	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a.a ##32	ENSGT00390000017004.a.b.m.a.a #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00530000063695.b.a.b
Chimpanzee	MODERN SPECIES	1	PBLD (ENSPTRG00000002552)	HNRNPH3 (ENSPTRG00000002553)	RUFY2 (ENSPTRG00000002554) #7	DNA2 (ENSPTRG00000002556) #8	SLC25A16 (ENSPTRG00000002557) #9	TET1 (ENSPTRG00000002558) #10	CCAR1 (ENSPTRG00000002560) #11	STOX1 (ENSPTRG00000002561) #12	DDX50 (ENSPTRG00000002562) #14	DDX21 (ENSPTRG00000002563) #15	KIFBP (ENSPTRG00000024353) #16	SRGN (ENSPTRG00000002565) #17	VPS26A (ENSPTRG00000002567) #18	SUPV3L1 (ENSPTRG00000002568) #19	HKDC1 (ENSPTRG00000002570) #21	HK1 (ENSPTRG00000002572) #22	TACR2 (ENSPTRG00000023335) #23	TSPAN15 (ENSPTRG00000002575) #25	ENSPTRG00000051955	NEUROG3 (ENSPTRG00000002576)	FAM241B (ENSPTRG00000002577) #26	ENSPTRG00000044676 #27	COL13A1 (ENSPTRG00000002579) #28	MACROH2A2 (ENSPTRG00000002581) #29	AIFM2 (ENSPTRG00000002582) #30	TYSND1 (ENSPTRG00000002583) #31	SAR1A (ENSPTRG00000002584) ##32	PPA1 (ENSPTRG00000002585) #34	NPFFR1 (ENSPTRG00000002586) #36	LRRC20 (ENSPTRG00000002588) #37	ENSPTRG00000048298
Bonobo	MODERN SPECIES	1	PBLD (ENSPPAG00000043142)	HNRNPH3 (ENSPPAG00000033764)	RUFY2 (ENSPPAG00000029488) #7	DNA2 (ENSPPAG00000037011) #8	SLC25A16 (ENSPPAG00000043641) #9	TET1 (ENSPPAG00000037029) #10	CCAR1 (ENSPPAG00000035962) #11	STOX1 (ENSPPAG00000035157) #12	DDX50 (ENSPPAG00000040723) #14	DDX21 (ENSPPAG00000036670) #15	KIFBP (ENSPPAG00000039180) #16	SRGN (ENSPPAG00000027779) #17	VPS26A (ENSPPAG00000041182) #18	SUPV3L1 (ENSPPAG00000034596) #19	HKDC1 (ENSPPAG00000035316) #21	HK1 (ENSPPAG00000040075) #22	TACR2 (ENSPPAG00000029177) #23	ENSPPAG00000036466 #24	TSPAN15 (ENSPPAG00000039562) #25	ENSPPAG00000032393	NEUROG3 (ENSPPAG00000013680)	FAM241B (ENSPPAG00000034218) #26	ENSPPAG00000042212 #27	COL13A1 (ENSPPAG00000043840) #28	MACROH2A2 (ENSPPAG00000028027) #29	AIFM2 (ENSPPAG00000043435) #30	TYSND1 (ENSPPAG00000029085) #31	SAR1A (ENSPPAG00000031193) ##32	PPA1 (ENSPPAG00000031831) #34	ENSPPAG00000040679 #36	LRRC20 (ENSPPAG00000040023) #37
Human	MODERN SPECIES	1	PBLD (ENSG00000108187)	HNRNPH3 (ENSG00000096746)	RUFY2 (ENSG00000204130) #7	DNA2 (ENSG00000138346) #8	SLC25A16 (ENSG00000122912) #9	TET1 (ENSG00000138336) #10	CCAR1 (ENSG00000060339) #11	STOX1 (ENSG00000165730) #12	DDX50 (ENSG00000107625) #14	DDX21 (ENSG00000165732) #15	KIFBP (ENSG00000198954) #16	SRGN (ENSG00000122862) #17	VPS26A (ENSG00000122958) #18	SUPV3L1 (ENSG00000156502) #19	HKDC1 (ENSG00000156510) #21	HK1 (ENSG00000156515) #22	TACR2 (ENSG00000075073) #23	TSPAN15 (ENSG00000099282) #25	NEUROG3 (ENSG00000122859)	FAM241B (ENSG00000171224) #26	COL13A1 (ENSG00000197467) #28	MACROH2A2 (ENSG00000099284) #29	AIFM2 (ENSG00000042286) #30	TYSND1 (ENSG00000156521) #31	SAR1A (ENSG00000079332) ##32	PPA1 (ENSG00000180817) #34	NPFFR1 (ENSG00000148734) #36	LRRC20 (ENSG00000172731) #37	EIF4EBP2 (ENSG00000148730)	NODAL (ENSG00000156574)	PALD1 (ENSG00000107719)
Gorilla	MODERN SPECIES	1	ENSGGOG00000010645 #8	ENSGGOG00000036980	SLC25A16 (ENSGGOG00000014517) #9	ENSGGOG00000000633	TET1 (ENSGGOG00000011822) #10	CCAR1 (ENSGGOG00000002776) #11	STOX1 (ENSGGOG00000010096) #12	DDX50 (ENSGGOG00000010100) #14	DDX21 (ENSGGOG00000005065) #15	KIFBP (ENSGGOG00000012793) #16	SRGN (ENSGGOG00000003319) #17	ENSGGOG00000010433 #18	SUPV3L1 (ENSGGOG00000005325) #19	HKDC1 (ENSGGOG00000012384) #21	TACR2 (ENSGGOG00000015935) #23	HK1 (ENSGGOG00000036737) #22	ENSGGOG00000011980 #24	TSPAN15 (ENSGGOG00000007780) #25	NEUROG3 (ENSGGOG00000036451)	FAM241B (ENSGGOG00000002190) #26	COL13A1 (ENSGGOG00000005032) #28	MACROH2A2 (ENSGGOG00000005947) #29	AIFM2 (ENSGGOG00000005951) #30	TYSND1 (ENSGGOG00000016639) #31	SAR1A (ENSGGOG00000024879) ##32	ENSGGOG00000037832	PPA1 (ENSGGOG00000016995) #34	NPFFR1 (ENSGGOG00000014103) #36	LRRC20 (ENSGGOG00000014113) #37	ENSGGOG00000042114	EIF4EBP2 (ENSGGOG00000036271)
Orangutan	MODERN SPECIES	1	HNRNPH3 (ENSPPYG00000002397)	RUFY2 (ENSPPYG00000002396) #7	DNA2 (ENSPPYG00000002395) #8	SLC25A16 (ENSPPYG00000002394) #9	TET1 (ENSPPYG00000002393) #10	CCAR1 (ENSPPYG00000002392) #11	STOX1 (ENSPPYG00000002391) #12	DDX50 (ENSPPYG00000002390) #14	DDX21 (ENSPPYG00000002389) #15	KIFBP (ENSPPYG00000002388) #16	SRGN (ENSPPYG00000002387) #17	VPS26A (ENSPPYG00000002386) #18	SUPV3L1 (ENSPPYG00000002385) #19	HKDC1 (ENSPPYG00000002384) #21	TACR2 (ENSPPYG00000002382) #23	HK1 (ENSPPYG00000002383) #22	TSPAN15 (ENSPPYG00000002381) #25	NEUROG3 (ENSPPYG00000002380)	ENSPPYG00000002379 #26	COL13A1 (ENSPPYG00000002378) #28	MACROH2A2 (ENSPPYG00000002377) #29	AIFM2 (ENSPPYG00000002376) #30	TYSND1 (ENSPPYG00000002375) #31	SAR1A (ENSPPYG00000002374) ##32	PPA1 (ENSPPYG00000029405) #34	NPFFR1 (ENSPPYG00000002373) #36	LRRC20 (ENSPPYG00000002372) #37	ENSPPYG00000038976	EIF4EBP2 (ENSPPYG00000002371)	NODAL (ENSPPYG00000002370)	PALD1 (ENSPPYG00000002369)
Gibbon	MODERN SPECIES	8	HNRNPH3 (ENSNLEG00000011843)	RUFY2 (ENSNLEG00000011835) #7	ENSNLEG00000030777 #8	ENSNLEG00000011828 #8	SLC25A16 (ENSNLEG00000034221) #9	TET1 (ENSNLEG00000011782) #10	CCAR1 (ENSNLEG00000011679) #11	STOX1 (ENSNLEG00000011670) #12	DDX50 (ENSNLEG00000011631) #14	DDX21 (ENSNLEG00000011591) #15	KIFBP (ENSNLEG00000011578) #16	SRGN (ENSNLEG00000011575) #17	VPS26A (ENSNLEG00000011548) #18	SUPV3L1 (ENSNLEG00000011521) #19	HKDC1 (ENSNLEG00000026747) #21	HK1 (ENSNLEG00000011439) #22	TACR2 (ENSNLEG00000011432) #23	TSPAN15 (ENSNLEG00000011425) #25	FAM241B (ENSNLEG00000030107) #26	ENSNLEG00000027659 #27	COL13A1 (ENSNLEG00000011295) #28	MACROH2A2 (ENSNLEG00000011286) #29	AIFM2 (ENSNLEG00000011281) #30	TYSND1 (ENSNLEG00000011278) #31	SAR1A (ENSNLEG00000011243) ##32	ENSNLEG00000028181	ENSNLEG00000034925	ENSNLEG00000011224	ENSNLEG00000011116	ENSNLEG00000035808	ENSNLEG00000035798
Platyrrhini	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a ##32	ENSGT00390000017004.a.b.k #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.l	ENSGT00940000160223
Cebidae	ANCESTRAL SPECIES	17	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a ##32	ENSGT00390000017004.a.b.k #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.l	ENSGT00940000160223
Cebidae_a	DUPLICATION
Cebidae_a	ANCESTRAL SPECIES	62	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.a.b #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.c #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.x.a.a ##32	ENSGT00390000017004.a.b.k #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342.l	ENSGT00940000160223	ENSGT00390000005448
Capuchin	MODERN SPECIES	215					TET1 (ENSCCAG00000024112) #10	CCAR1 (ENSCCAG00000020659) #11	STOX1 (ENSCCAG00000028086) #12	DDX50 (ENSCCAG00000030543) #14	DDX21 (ENSCCAG00000026288) #15	ENSCCAG00000008148	KIFBP (ENSCCAG00000029878) #16	SRGN (ENSCCAG00000037221) #17	VPS26A (ENSCCAG00000021117) #18	SUPV3L1 (ENSCCAG00000033975) #19	HKDC1 (ENSCCAG00000027269) #21	ENSCCAG00000032765 #22	TACR2 (ENSCCAG00000022336) #23	TSPAN15 (ENSCCAG00000029490) #25	FAM241B (ENSCCAG00000032184) #26	COL13A1 (ENSCCAG00000035276) #28	MACROH2A2 (ENSCCAG00000034612) #29	AIFM2 (ENSCCAG00000037129) #30	TYSND1 (ENSCCAG00000028714) #31	SAR1A (ENSCCAG00000019722) ##32	PPA1 (ENSCCAG00000032333) #34	NPFFR1 (ENSCCAG00000022929) #36	LRRC20 (ENSCCAG00000023860) #37	ENSCCAG00000008526	EIF4EBP2 (ENSCCAG00000037637)	NODAL (ENSCCAG00000032672)	PALD1 (ENSCCAG00000030277)
Bolivian squirrel monkey	MODERN SPECIES	72	RUFY2 (ENSSBOG00000026822) #7	DNA2 (ENSSBOG00000026235) #8	ENSSBOG00000030450	ENSSBOG00000032367	TET1 (ENSSBOG00000033648) #10	CCAR1 (ENSSBOG00000030420) #11	STOX1 (ENSSBOG00000026365) #12	DDX50 (ENSSBOG00000014441) #14	ENSSBOG00000024156 #15	ENSSBOG00000022449	KIFBP (ENSSBOG00000019363) #16	SRGN (ENSSBOG00000019744) #17	VPS26A (ENSSBOG00000030031) #18	SUPV3L1 (ENSSBOG00000033775) #19	HKDC1 (ENSSBOG00000032701) #21	HK1 (ENSSBOG00000035611) #22	ENSSBOG00000014118	TACR2 (ENSSBOG00000035621) #23	TSPAN15 (ENSSBOG00000032301) #25	ENSSBOG00000026497	FAM241B (ENSSBOG00000025145) #26	ENSSBOG00000033865 #27	COL13A1 (ENSSBOG00000033267) #28	MACROH2A2 (ENSSBOG00000026312) #29	AIFM2 (ENSSBOG00000021291) #30	TYSND1 (ENSSBOG00000031932) #31	SAR1A (ENSSBOG00000036189) ##32	ENSSBOG00000032113 #34	NPFFR1 (ENSSBOG00000027357) #36	LRRC20 (ENSSBOG00000004099) #37	ENSSBOG00000032439
Cebidae_a	ANCESTRAL SPECIES																	ENSGT00950000182787.A.d #22
Capuchin	MODERN SPECIES	469	MFAP5 (ENSCCAG00000028419)	AICDA (ENSCCAG00000030398)	CLEC4E (ENSCCAG00000033330)	CLEC4D (ENSCCAG00000030690)	CLEC6A (ENSCCAG00000029120)	ENSCCAG00000021038	ENSCCAG00000006775	CLEC4A (ENSCCAG00000033083)	ENSCCAG00000015141	NECAP1 (ENSCCAG00000015830)	FOXJ2 (ENSCCAG00000006397)	ENSCCAG00000037121	ENSCCAG00000019466	ENSCCAG00000027004	NANOGNB (ENSCCAG00000032425)	ENSCCAG00000035290 #22	GDF3 (ENSCCAG00000024344)	APOBEC1 (ENSCCAG00000022258)	ENSCCAG00000029802	ENSCCAG00000020433	ENSCCAG00000027282	ENSCCAG00000026419	ENSCCAG00000036422	CD163 (ENSCCAG00000037775)
Marmoset	MODERN SPECIES	3	DDX50 (ENSCJAG00000018844) #14	ENSCJAG00000054971	ENSCJAG00000084141	ENSCJAG00000046541	ENSCJAG00000013038	ENSCJAG00000062281	ENSCJAG00000012871	DDX21 (ENSCJAG00000012876) #15	KIFBP (ENSCJAG00000012896) #16	ENSCJAG00000076667	ENSCJAG00000081276	SRGN (ENSCJAG00000038711) #17	VPS26A (ENSCJAG00000012907) #18	SUPV3L1 (ENSCJAG00000012937) #19	HKDC1 (ENSCJAG00000012961) #21	HK1 (ENSCJAG00000016503) #22	TACR2 (ENSCJAG00000048453) #23	TSPAN15 (ENSCJAG00000016486) #25	NEUROG3 (ENSCJAG00000016485)	FAM241B (ENSCJAG00000073180) #26	COL13A1 (ENSCJAG00000016435) #28	ENSCJAG00000075489	MACROH2A2 (ENSCJAG00000016412) #29	TYSND1 (ENSCJAG00000016374) #31	ENSCJAG00000042744 ##32	NPFFR1 (ENSCJAG00000016344) #36	LRRC20 (ENSCJAG00000016341) #37	ENSCJAG00000082174	NODAL (ENSCJAG00000016288)	PALD1 (ENSCJAG00000016917)	PRF1 (ENSCJAG00000014858)
Mas night monkey	MODERN SPECIES	651	DNA2 (ENSANAG00000037527) #8	SLC25A16 (ENSANAG00000020312) #9	TET1 (ENSANAG00000028392) #10	CCAR1 (ENSANAG00000023002) #11	STOX1 (ENSANAG00000025724) #12	DDX50 (ENSANAG00000017785) #14	ENSANAG00000017521	DDX21 (ENSANAG00000038109) #15	ENSANAG00000038214	ENSANAG00000024391	KIFBP (ENSANAG00000023947) #16	SRGN (ENSANAG00000032565) #17	VPS26A (ENSANAG00000022406) #18	SUPV3L1 (ENSANAG00000022155) #19	HKDC1 (ENSANAG00000028651) #21	HK1 (ENSANAG00000022402) #22	TACR2 (ENSANAG00000024413) #23	TSPAN15 (ENSANAG00000031227) #25	FAM241B (ENSANAG00000029057) #26	ENSANAG00000036358
Tarsier	MODERN SPECIES	7082						CCAR1 (ENSTSYG00000010684) #11	STOX1 (ENSTSYG00000035770) #12	DDX50 (ENSTSYG00000004192) ##14	ENSTSYG00000001285	DDX21 (ENSTSYG00000011231) #15	KIF1BP (ENSTSYG00000012567) #16	SRGN (ENSTSYG00000036827) #17	VPS26A (ENSTSYG00000012254) #18	SUPV3L1 (ENSTSYG00000012845) #19	HKDC1 (ENSTSYG00000027595) #21	HK1 (ENSTSYG00000012356) #22	TACR2 (ENSTSYG00000012359) #23	TSPAN15 (ENSTSYG00000003842) #25	ENSTSYG00000002284	CUNH10orf35 (ENSTSYG00000033503) #26	ENSTSYG00000028572
Strepsirrhini	ANCESTRAL SPECIES	11	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276.x.a #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Lemuriformes	ANCESTRAL SPECIES	7	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520.i #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276.x.a #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Lemuriformes_a	ANCESTRAL SPECIES	48	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520.i #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00860000135785 #27	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276.x.a #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Coquerels sifaka	MODERN SPECIES	112	HNRNPH3 (ENSPCOG00000028162)	RUFY2 (ENSPCOG00000020569) #7	ENSPCOG00000024631 #8	DNA2 (ENSPCOG00000027108) #8	ENSPCOG00000026884 #9	TET1 (ENSPCOG00000022641) #10	CCAR1 (ENSPCOG00000020489) #11	STOX1 (ENSPCOG00000018096) #12	DDX50 (ENSPCOG00000012574) #14	DDX21 (ENSPCOG00000019284) #15	KIFBP (ENSPCOG00000006398) #16	SRGN (ENSPCOG00000028219) #17	ENSPCOG00000018264 #18	SUPV3L1 (ENSPCOG00000021435) #19	HKDC1 (ENSPCOG00000024143) #21	HK1 (ENSPCOG00000014452) #22	TACR2 (ENSPCOG00000007728) #23	TSPAN15 (ENSPCOG00000018271) #25	FAM241B (ENSPCOG00000015529) #26	COL13A1 (ENSPCOG00000018840) #28	MACROH2A2 (ENSPCOG00000024809) #29	AIFM2 (ENSPCOG00000019339) #30	TYSND1 (ENSPCOG00000007292) #31	SAR1A (ENSPCOG00000021042) #32	PPA1 (ENSPCOG00000014348) #34	NPFFR1 (ENSPCOG00000016193) #36	LRRC20 (ENSPCOG00000022500) #37	EIF4EBP2 (ENSPCOG00000020121)	NODAL (ENSPCOG00000016462)	PALD1 (ENSPCOG00000018393)	PRF1 (ENSPCOG00000017299)
Greater bamboo lemur	MODERN SPECIES	57	PBLD (ENSPSMG00000010204)	HNRNPH3 (ENSPSMG00000010159)	RUFY2 (ENSPSMG00000010107) #7	DNA2 (ENSPSMG00000010012) #8	SLC25A16 (ENSPSMG00000009939) #9	TET1 (ENSPSMG00000009918) #10	CCAR1 (ENSPSMG00000009803) #11	ENSPSMG00000009605	STOX1 (ENSPSMG00000009594) #12	DDX50 (ENSPSMG00000009506) ##14	DDX21 (ENSPSMG00000009395) #15	SRGN (ENSPSMG00000009366) #17	VPS26A (ENSPSMG00000009335) #18	SUPV3L1 (ENSPSMG00000009249) #19	HKDC1 (ENSPSMG00000009179) #21	HK1 (ENSPSMG00000008971) #22	TACR2 (ENSPSMG00000008803) #23	TSPAN15 (ENSPSMG00000008783) #25	NEUROG3 (ENSPSMG00000008753)	FAM241B (ENSPSMG00000008746) #26	ENSPSMG00000008742 #27	COL13A1 (ENSPSMG00000008300) #28	MACROH2A2 (ENSPSMG00000007648) #29	AIFM2 (ENSPSMG00000007628) #30	TYSND1 (ENSPSMG00000007584) #31	ENSPSMG00000007573	SAR1A (ENSPSMG00000007560) #32	ENSPSMG00000007535	PPA1 (ENSPSMG00000007508) #34	NPFFR1 (ENSPSMG00000007436) #36	LRRC20 (ENSPSMG00000007422) #37
Mouse lemur	MODERN SPECIES	6		RUFY2 (ENSMICG00000007589) #7	DNA2 (ENSMICG00000004377) #8	ENSMICG00000029347	ENSMICG00000028868 #9	TET1 (ENSMICG00000001289) #10	CCAR1 (ENSMICG00000007448) #11	STOX1 (ENSMICG00000048078) #12	DDX50 (ENSMICG00000017539) ##14	ENSMICG00000015112 #15	KIFBP (ENSMICG00000035217) #16	SRGN (ENSMICG00000046302) #17	ENSMICG00000014940 #18	SUPV3L1 (ENSMICG00000014955) #19	HKDC1 (ENSMICG00000014978) #21	HK1 (ENSMICG00000015004) #22	TACR2 (ENSMICG00000043783) #23	TSPAN15 (ENSMICG00000015036) #25	FAM241B (ENSMICG00000027702) #26	COL13A1 (ENSMICG00000007401) #28	MACROH2A2 (ENSMICG00000001630) #29	AIFM2 (ENSMICG00000001632) #30	TYSND1 (ENSMICG00000035296) #31	SAR1A (ENSMICG00000001638) #32	ENSMICG00000029937 #34	NPFFR1 (ENSMICG00000045660) #36	LRRC20 (ENSMICG00000015067) #37	ENSMICG00000043210	NODAL (ENSMICG00000015080)	PALD1 (ENSMICG00000015086)	PRF1 (ENSMICG00000028747)
Bushbaby	MODERN SPECIES	123	PBLD (ENSOGAG00000000982)	HNRNPH3 (ENSOGAG00000012493)	RUFY2 (ENSOGAG00000012496) #7	DNA2 (ENSOGAG00000011182) #8	SLC25A16 (ENSOGAG00000011191) #9	TET1 (ENSOGAG00000034454) #10	CCAR1 (ENSOGAG00000013294) #11	STOX1 (ENSOGAG00000031089) #12	DDX50 (ENSOGAG00000001844) ##14	ENSOGAG00000001846 #15	KIFBP (ENSOGAG00000001851) #16	SRGN (ENSOGAG00000005910) #17	VPS26A (ENSOGAG00000005911) #18	SUPV3L1 (ENSOGAG00000005905) #19	HKDC1 (ENSOGAG00000005913) #21	HK1 (ENSOGAG00000005918) #22	TACR2 (ENSOGAG00000005924) #23	TSPAN15 (ENSOGAG00000005925) #25	NEUROG3 (ENSOGAG00000005928)	FAM241B (ENSOGAG00000016371) #26	COL13A1 (ENSOGAG00000004498) #28	MACROH2A2 (ENSOGAG00000005035) #29	AIFM2 (ENSOGAG00000005036) #30	TYSND1 (ENSOGAG00000028011) #31	SAR1A (ENSOGAG00000005040) #32	PPA1 (ENSOGAG00000013529) #34	NPFFR1 (ENSOGAG00000032350) #36	ENSOGAG00000031126	LRRC20 (ENSOGAG00000010085) #37	EIF4EBP2 (ENSOGAG00000005714)	NODAL (ENSOGAG00000005716)
Euarchontoglires_A	ANCESTRAL SPECIES	15	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Glires	ANCESTRAL SPECIES	16	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342
Rodentia	ANCESTRAL SPECIES	16	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Rodentia_B	ANCESTRAL SPECIES	10	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Myomorpha	ANCESTRAL SPECIES	15	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Muroidea	ANCESTRAL SPECIES	43	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Muroidea_A	ANCESTRAL SPECIES	8	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Cricetidae	ANCESTRAL SPECIES	9	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a.d #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120.d #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Cricetinae	ANCESTRAL SPECIES	24	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a.d #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120.d #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Golden Hamster	MODERN SPECIES	641	Hnrnph3 (ENSMAUG00000022233)	Rufy2 (ENSMAUG00000005119) #7	Dna2 (ENSMAUG00000002986) #8	Slc25a16 (ENSMAUG00000009526) #9	Tet1 (ENSMAUG00000007644) #10	ENSMAUG00000022270	ENSMAUG00000002239 #12	ENSMAUG00000022192 ##14	Ddx21 (ENSMAUG00000011153) #15	Kifbp (ENSMAUG00000022198) #16	ENSMAUG00000008633	ENSMAUG00000022229 #18	ENSMAUG00000001212	Supv3l1 (ENSMAUG00000005895) #19	Hkdc1 (ENSMAUG00000011216) #21	Hk1 (ENSMAUG00000003378) #22	Tacr2 (ENSMAUG00000008248) #23	Tspan15 (ENSMAUG00000009085) #25	Neurog3 (ENSMAUG00000010759)	ENSMAUG00000006808 #26	Col13a1 (ENSMAUG00000007217) #28	Macroh2a2 (ENSMAUG00000015234) #29	Aifm2 (ENSMAUG00000009547) #30	Tysnd1 (ENSMAUG00000010004) #31	Sar1a (ENSMAUG00000005624) #32	Ppa1 (ENSMAUG00000008277) #34	Npffr1 (ENSMAUG00000006691) #36	Lrrc20 (ENSMAUG00000011702) #37	Eif4ebp2 (ENSMAUG00000012220)	Nodal (ENSMAUG00000012281)	Pald1 (ENSMAUG00000010402)
Chinese hamster chok1gshd	MODERN SPECIES	204	Hnrnph3 (ENSCGRG00001024086)	Rufy2 (ENSCGRG00001012507) #7	Dna2 (ENSCGRG00001000055) #8	Slc25a16 (ENSCGRG00001008006) #9	Tet1 (ENSCGRG00001025057) #10	Ccar1 (ENSCGRG00001019471) #11	Stox1 (ENSCGRG00001017967) #12	Ddx50 (ENSCGRG00001020223) ##14	ENSCGRG00001016264 #15	Kifbp (ENSCGRG00001000205) #16	Srgn (ENSCGRG00001023117) #17	Vps26a (ENSCGRG00001012205) #18	ENSCGRG00001018345	Supv3l1 (ENSCGRG00001020865) #19	Hkdc1 (ENSCGRG00001015329) #21	Hk1 (ENSCGRG00001011689) #22	Tacr2 (ENSCGRG00001021165) #23	Tspan15 (ENSCGRG00001001046) #25	Neurog3 (ENSCGRG00001010173)	ENSCGRG00001012416 #26	Col13a1 (ENSCGRG00001022499) #28	Macroh2a2 (ENSCGRG00001009991) #29	Aifm2 (ENSCGRG00001022294) #30	Tysnd1 (ENSCGRG00001018209) #31	Sar1a (ENSCGRG00001016695) #32	Ppa1 (ENSCGRG00001021182) #34	Npffr1 (ENSCGRG00001024879) #36	Lrrc20 (ENSCGRG00001016697) #37	Eif4ebp2 (ENSCGRG00001010892)	Nodal (ENSCGRG00001000105)	ENSCGRG00001010371
Cricetidae_B	ANCESTRAL SPECIES	12	ENSGT00390000017595.f	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a.d #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120.d #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Prairie vole	MODERN SPECIES	352	Pbld2 (ENSMOCG00000022511)	Hnrnph3 (ENSMOCG00000008138)	Rufy2 (ENSMOCG00000008899) #7	Dna2 (ENSMOCG00000019026) #8	Slc25a16 (ENSMOCG00000019250) #9	Tet1 (ENSMOCG00000021099) #10	Ccar1 (ENSMOCG00000007793) #11	ENSMOCG00000005405 #12	Ddx50 (ENSMOCG00000001676) ##14	Ddx21 (ENSMOCG00000020855) #15	Kifbp (ENSMOCG00000001442) #16	ENSMOCG00000004600	Vps26a (ENSMOCG00000013621) #18	Supv3l1 (ENSMOCG00000013772) #19	Hkdc1 (ENSMOCG00000010074) #21	Hk1 (ENSMOCG00000018476) #22	Tacr2 (ENSMOCG00000015752) #23	Tspan15 (ENSMOCG00000016518) #25	Neurog3 (ENSMOCG00000004110)	ENSMOCG00000011147 #26	Col13a1 (ENSMOCG00000014440) #28	Macroh2a2 (ENSMOCG00000017359) #29	Aifm2 (ENSMOCG00000014368) #30	Tysnd1 (ENSMOCG00000012441) #31	Sar1a (ENSMOCG00000018004) #32	ENSMOCG00000004220	Ppa1 (ENSMOCG00000016579) #34	Npffr1 (ENSMOCG00000000219) #36	Lrrc20 (ENSMOCG00000015935) #37	Eif4ebp2 (ENSMOCG00000013203)	Nodal (ENSMOCG00000002962)
Northern American deer mouse	MODERN SPECIES	13	Pbld2 (ENSPEMG00000024713)	Hnrnph3 (ENSPEMG00000017748)	Rufy2 (ENSPEMG00000020397) #7	Dna2 (ENSPEMG00000014458) #8	Slc25a16 (ENSPEMG00000006868) #9	Tet1 (ENSPEMG00000010639) #10	Ccar1 (ENSPEMG00000015377) #11	Stox1 (ENSPEMG00000025567) #12	Ddx50 (ENSPEMG00000020899) ##14	Ddx21 (ENSPEMG00000018513) #15	Kifbp (ENSPEMG00000018788) #16	Srgn (ENSPEMG00000024958) #17	Vps26a (ENSPEMG00000013455) #18	Supv3l1 (ENSPEMG00000016292) #19	Hkdc1 (ENSPEMG00000009192) #21	Hk1 (ENSPEMG00000013863) #22	Tacr2 (ENSPEMG00000017467) #23	Tspan15 (ENSPEMG00000015161) #25	ENSPEMG00000010091 #26	Neurog3 (ENSPEMG00000014595)	Col13a1 (ENSPEMG00000004697) #28	Macroh2a2 (ENSPEMG00000012753) #29	Aifm2 (ENSPEMG00000011813) #30	Tysnd1 (ENSPEMG00000007945) #31	Sar1a (ENSPEMG00000025677) #32	Ppa1 (ENSPEMG00000014364) #34	Npffr1 (ENSPEMG00000000515) #36	Lrrc20 (ENSPEMG00000027048) #37	ENSPEMG00000029846	Eif4ebp2 (ENSPEMG00000020578)	Nodal (ENSPEMG00000020412)
Murinae	ANCESTRAL SPECIES	18	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Mus	ANCESTRAL SPECIES	15	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00900000143318	ENSGT00940000155342
Mus_A	ANCESTRAL SPECIES	11	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00900000143318	ENSGT00940000155342
Mus_B	ANCESTRAL SPECIES	10	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00900000143318	ENSGT00940000155342
Mus_C	ANCESTRAL SPECIES	7	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00860000136293	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00900000143318	ENSGT00940000155342
Steppe mouse	MODERN SPECIES	3004	Rufy2 (ENSMSIG00000030370) #7	Dna2 (ENSMSIG00000030392) #8	ENSMSIG00000030401 #9	Tet1 (ENSMSIG00000030409) #10	Ccar1 (ENSMSIG00000030418) #11	Stox1 (ENSMSIG00000030438) #12	ENSMSIG00000030440	Ddx50 (ENSMSIG00000030443) ##14	Ddx21 (ENSMSIG00000030447) #15	Kifbp (ENSMSIG00000030449) #16	Srgn (ENSMSIG00000030457) #17	Vps26a (ENSMSIG00000030469) #18	ENSMSIG00000030471	Supv3l1 (ENSMSIG00000030472) #19	Hkdc1 (ENSMSIG00000030475) #21	Hk1 (ENSMSIG00000030482) #22	Tacr2 (ENSMSIG00000030536) #23	Tspan15 (ENSMSIG00000030540) #25	Fam241b (ENSMSIG00000030548)	Neurog3 (ENSMSIG00000030554)	Col13a1 (ENSMSIG00000030555) #28	ENSMSIG00000030618 #29	Aifm2 (ENSMSIG00000030621) #30	Tysnd1 (ENSMSIG00000030627) #31	ENSMSIG00000030631	Sar1a (ENSMSIG00000030634) #32	ENSMSIG00000030636 #34	Npffr1 (ENSMSIG00000030640) #36
spretus	MODERN SPECIES	1	Hnrnph3 (MGP_SPRETEiJ_G0016207)	Rufy2 (MGP_SPRETEiJ_G0016206) #7	Dna2 (MGP_SPRETEiJ_G0016205) #8	Slc25a16 (MGP_SPRETEiJ_G0016204) #9	Tet1 (MGP_SPRETEiJ_G0016203) #10	Ccar1 (MGP_SPRETEiJ_G0016202) #11	Stox1 (MGP_SPRETEiJ_G0016201) #12	Ddx50 (MGP_SPRETEiJ_G0016200) ##14	Ddx21 (MGP_SPRETEiJ_G0016199) #15	Kifbp (MGP_SPRETEiJ_G0016198) #16	Srgn (MGP_SPRETEiJ_G0016197) #17	MGP_SPRETEiJ_G0016196	Supv3l1 (MGP_SPRETEiJ_G0016195) #19	Vps26a (MGP_SPRETEiJ_G0016194) #18	Hkdc1 (MGP_SPRETEiJ_G0016193) #21	Hk1 (MGP_SPRETEiJ_G0016192) #22	Tacr2 (MGP_SPRETEiJ_G0016191) #23	Tspan15 (MGP_SPRETEiJ_G0016190) #25	Neurog3 (MGP_SPRETEiJ_G0016189)	Fam241b (MGP_SPRETEiJ_G0016188)	Col13a1 (MGP_SPRETEiJ_G0016187) #28	Macroh2a2 (MGP_SPRETEiJ_G0016186) #29	Aifm2 (MGP_SPRETEiJ_G0016185) #30	Tysnd1 (MGP_SPRETEiJ_G0016184) #31	Sar1a (MGP_SPRETEiJ_G0016183) #32	Ppa1 (MGP_SPRETEiJ_G0016182) #34	Npffr1 (MGP_SPRETEiJ_G0016181) #36	Lrrc20 (MGP_SPRETEiJ_G0016180) #37	MGP_SPRETEiJ_G0016179	Eif4ebp2 (MGP_SPRETEiJ_G0016178)	MGP_SPRETEiJ_G0016177
Mouse	MODERN SPECIES	1	Pbld2 (ENSMUSG00000020072)	Hnrnph3 (ENSMUSG00000020069)	Rufy2 (ENSMUSG00000020070) #7	Dna2 (ENSMUSG00000036875) #8	Slc25a16 (ENSMUSG00000071253) #9	Tet1 (ENSMUSG00000047146) #10	Ccar1 (ENSMUSG00000020074) #11	Stox1 (ENSMUSG00000036923) #12	Ddx50 (ENSMUSG00000020076) ##14	Ddx21 (ENSMUSG00000020075) #15	Kifbp (ENSMUSG00000036955) #16	Srgn (ENSMUSG00000020077) #17	Vps26a (ENSMUSG00000020078) #18	Supv3l1 (ENSMUSG00000020079) #19	Hkdc1 (ENSMUSG00000020080) #21	Hk1 (ENSMUSG00000037012) #22	Tacr2 (ENSMUSG00000020081) #23	Tspan15 (ENSMUSG00000037031) #25	Neurog3 (ENSMUSG00000044312)	Fam241b (ENSMUSG00000020083)	Col13a1 (ENSMUSG00000058806) #28	Macroh2a2 (ENSMUSG00000020086) #29	Aifm2 (ENSMUSG00000020085) #30	Tysnd1 (ENSMUSG00000020087) #31	Sar1a (ENSMUSG00000020088) #32	Ppa1 (ENSMUSG00000020089) #34	Npffr1 (ENSMUSG00000020090) #36	Lrrc20 (ENSMUSG00000037151) #37	Eif4ebp2 (ENSMUSG00000020091)	Nodal (ENSMUSG00000037171)	Pald1 (ENSMUSG00000020092)
Ryukyu mouse	MODERN SPECIES	1	Hnrnph3 (MGP_CAROLIEiJ_G0015396)	Rufy2 (MGP_CAROLIEiJ_G0015395) #7	Dna2 (MGP_CAROLIEiJ_G0015394) #8	Slc25a16 (MGP_CAROLIEiJ_G0015393) #9	Tet1 (MGP_CAROLIEiJ_G0015392) #10	Ccar1 (MGP_CAROLIEiJ_G0015391) #11	Stox1 (MGP_CAROLIEiJ_G0015390) #12	Ddx50 (MGP_CAROLIEiJ_G0015389) ##14	Ddx21 (MGP_CAROLIEiJ_G0015388) #15	Kifbp (MGP_CAROLIEiJ_G0015387) #16	Srgn (MGP_CAROLIEiJ_G0015386) #17	Vps26a (MGP_CAROLIEiJ_G0015385) #18	MGP_CAROLIEiJ_G0015384	Supv3l1 (MGP_CAROLIEiJ_G0015383) #19	Hkdc1 (MGP_CAROLIEiJ_G0015382) #21	Hk1 (MGP_CAROLIEiJ_G0015381) #22	Tacr2 (MGP_CAROLIEiJ_G0015380) #23	Tspan15 (MGP_CAROLIEiJ_G0015379) #25	Neurog3 (MGP_CAROLIEiJ_G0015378)	Fam241b (MGP_CAROLIEiJ_G0015377)	Col13a1 (MGP_CAROLIEiJ_G0015376) #28	Macroh2a2 (MGP_CAROLIEiJ_G0015375) #29	Aifm2 (MGP_CAROLIEiJ_G0015374) #30	Tysnd1 (MGP_CAROLIEiJ_G0015373) #31	Sar1a (MGP_CAROLIEiJ_G0015372) #32	Ppa1 (MGP_CAROLIEiJ_G0015371) #34	Npffr1 (MGP_CAROLIEiJ_G0015370) #36	Lrrc20 (MGP_CAROLIEiJ_G0015369) #37	MGP_CAROLIEiJ_G0015368	Eif4ebp2 (MGP_CAROLIEiJ_G0015367)	Nodal (MGP_CAROLIEiJ_G0015366)
Shrew mouse	MODERN SPECIES	22	Hnrnph3 (MGP_PahariEiJ_G0030812)	Rufy2 (MGP_PahariEiJ_G0030811) #7	Dna2 (MGP_PahariEiJ_G0030810) #8	Slc25a16 (MGP_PahariEiJ_G0030809) #9	Tet1 (MGP_PahariEiJ_G0030808) #10	Ccar1 (MGP_PahariEiJ_G0030807) #11	Stox1 (MGP_PahariEiJ_G0030806) #12	Ddx50 (MGP_PahariEiJ_G0030805) ##14	Ddx21 (MGP_PahariEiJ_G0030804) #15	Kifbp (MGP_PahariEiJ_G0030803) #16	Srgn (MGP_PahariEiJ_G0030802) #17	Vps26a (MGP_PahariEiJ_G0030801) #18	MGP_PahariEiJ_G0030800	Supv3l1 (MGP_PahariEiJ_G0030799) #19	Hkdc1 (MGP_PahariEiJ_G0030798) #21	Hk1 (MGP_PahariEiJ_G0030797) #22	Tacr2 (MGP_PahariEiJ_G0030796) #23	Tspan15 (MGP_PahariEiJ_G0030795) #25	Neurog3 (MGP_PahariEiJ_G0030794)	MGP_PahariEiJ_G0030793 #26	Col13a1 (MGP_PahariEiJ_G0030792) #28	Macroh2a2 (MGP_PahariEiJ_G0030791) #29	Aifm2 (MGP_PahariEiJ_G0030790) #30	Tysnd1 (MGP_PahariEiJ_G0030789) #31	Sar1a (MGP_PahariEiJ_G0030788) #32	Ppa1 (MGP_PahariEiJ_G0030787) #34	Npffr1 (MGP_PahariEiJ_G0030786) #36	Lrrc20 (MGP_PahariEiJ_G0030785) #37	MGP_PahariEiJ_G0030784	Eif4ebp2 (MGP_PahariEiJ_G0030783)	Nodal (MGP_PahariEiJ_G0030782)
Rat	MODERN SPECIES	12	Rfx6 (ENSRNOG00000027949)	ENSRNOG00000070167	Gprc6a (ENSRNOG00000000401)	Kpna5 (ENSRNOG00000030109)	Zup1 (ENSRNOG00000000398)	Rsph4a (ENSRNOG00000049696)	Ccar1 (ENSRNOG00000000397) #11	Stox1 (ENSRNOG00000023712) #12	Ddx50 (ENSRNOG00000000396) ##14	Ddx21 (ENSRNOG00000043099) #15	Kifbp (ENSRNOG00000000395) #16	Srgn (ENSRNOG00000000394) #17	Vps26a (ENSRNOG00000030683) #18	Supv3l1 (ENSRNOG00000000392) #19	Hkdc1 (ENSRNOG00000049045) #21	Hk1 (ENSRNOG00000046891) #22	Tacr2 (ENSRNOG00000050658) #23	Tspan15 (ENSRNOG00000046204) #25	Neurog3 (ENSRNOG00000024413)	Fam241b (ENSRNOG00000000551) #26	Col13a1 (ENSRNOG00000000552) #28	Macroh2a2 (ENSRNOG00000024751) #29	Aifm2 (ENSRNOG00000059445) #30	Tysnd1 (ENSRNOG00000024839) #31	Ppa1 (ENSRNOG00000000557) #32	Ppa1 (ENSRNOG00000063854) #34	Npffr1 (ENSRNOG00000000559) #36	ENSRNOG00000069172	Lrrc20 (ENSRNOG00000000560) #37	ENSRNOG00000066789	Eif4ebp2 (ENSRNOG00000055391)
Lesser Egyptian jerboa	MODERN SPECIES	64	ENSJJAG00000018983	ENSJJAG00000022736	ENSJJAG00000022466 #7	Dna2 (ENSJJAG00000021501) #8	Slc25a16 (ENSJJAG00000019315) #9	Tet1 (ENSJJAG00000023109) #10	Ccar1 (ENSJJAG00000024055) #11	ENSJJAG00000017394 #12	ENSJJAG00000023928 ##14	ENSJJAG00000023047	Ddx21 (ENSJJAG00000014035) #15	Kifbp (ENSJJAG00000004794) #16	ENSJJAG00000011179 #18	Supv3l1 (ENSJJAG00000012919) #19	ENSJJAG00000017579 ##22	Hk1 (ENSJJAG00000019550) #22	Tacr2 (ENSJJAG00000023714) #23	Tspan15 (ENSJJAG00000023437) #25	ENSJJAG00000007347 #26	Neurog3 (ENSJJAG00000010523)	Col13a1 (ENSJJAG00000011939) #28	Macroh2a2 (ENSJJAG00000015164) #29	Aifm2 (ENSJJAG00000013734) #30	ENSJJAG00000011394 #31	ENSJJAG00000016603 #32	Ppa1 (ENSJJAG00000021599) #34	Npffr1 (ENSJJAG00000024420) #36	Lrrc20 (ENSJJAG00000021553) #37	Eif4ebp2 (ENSJJAG00000017843)	Nodal (ENSJJAG00000019905)	Pald1 (ENSJJAG00000015978)
Kangaroo rat	MODERN SPECIES	353	Hnrnph3 (ENSDORG00000011470)	ENSDORG00000011475 #7	Dna2 (ENSDORG00000008959) #8	Slc25a16 (ENSDORG00000008871) #9	ENSDORG00000023710 #10	ENSDORG00000025851 #11	ENSDORG00000025771 #11	Stox1 (ENSDORG00000007309) #12	Ddx50 (ENSDORG00000007310) ##14	Ddx21 (ENSDORG00000002202) #15	Kifbp (ENSDORG00000005104) #16	Srgn (ENSDORG00000023694) #17	Vps26a (ENSDORG00000016728) #18	Supv3l1 (ENSDORG00000016650) #19	Hkdc1 (ENSDORG00000015608) #21	Hk1 (ENSDORG00000015615) #22	Tacr2 (ENSDORG00000015619) #23	Tspan15 (ENSDORG00000008464) #25	ENSDORG00000024649 #26	Col13a1 (ENSDORG00000007218) #28	Macroh2a2 (ENSDORG00000011220) #29	Aifm2 (ENSDORG00000011223) #30	ENSDORG00000028507	Tysnd1 (ENSDORG00000016309) #31	ENSDORG00000023465 #32	Ppa1 (ENSDORG00000006412) #34	Npffr1 (ENSDORG00000006413) #36	Lrrc20 (ENSDORG00000015982) #37	Eif4ebp2 (ENSDORG00000025031)	Nodal (ENSDORG00000011307)	Pald1 (ENSDORG00000009740)
Rodentia_A	ANCESTRAL SPECIES	15	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Sciuridae	ANCESTRAL SPECIES	30	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Marmotini	ANCESTRAL SPECIES	44	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Alpin marmot	MODERN SPECIES	68	PBLD (ENSMMMG00000009871)	ENSMMMG00000009862	RUFY2 (ENSMMMG00000009654) #7	DNA2 (ENSMMMG00000009618) #8	SLC25A16 (ENSMMMG00000009602) #9	TET1 (ENSMMMG00000009420) #10	CCAR1 (ENSMMMG00000009330) #11	STOX1 (ENSMMMG00000009300) #12	DDX50 (ENSMMMG00000009272) ##14	DDX21 (ENSMMMG00000007829) #15	KIFBP (ENSMMMG00000007778) #16	SRGN (ENSMMMG00000007773) #17	VPS26A (ENSMMMG00000007747) #18	SUPV3L1 (ENSMMMG00000007708) #19	HKDC1 (ENSMMMG00000007657) #21	HK1 (ENSMMMG00000007466) #22	TACR2 (ENSMMMG00000007437) #23	TSPAN15 (ENSMMMG00000007427) #25	NEUROG3 (ENSMMMG00000007424)	FAM241B (ENSMMMG00000007408) #26	MACROH2A2 (ENSMMMG00000007272) #29	AIFM2 (ENSMMMG00000007255) #30	TYSND1 (ENSMMMG00000007246) #31	ENSMMMG00000007241	SAR1A (ENSMMMG00000007230) #32	PPA1 (ENSMMMG00000007219) #34	NPFFR1 (ENSMMMG00000007206) #36	LRRC20 (ENSMMMG00000007191) #37	EIF4EBP2 (ENSMMMG00000007182)	NODAL (ENSMMMG00000007178)	PALD1 (ENSMMMG00000007147)
Marmotini_b	ANCESTRAL SPECIES	53	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Arctic ground squirrel	MODERN SPECIES	142	ATOH7 (ENSUPAG00010008383)	PBLD (ENSUPAG00010008386)	HNRNPH3 (ENSUPAG00010008390)	RUFY2 (ENSUPAG00010008404) #7	DNA2 (ENSUPAG00010008465) #8	SLC25A16 (ENSUPAG00010008501) #9	TET1 (ENSUPAG00010008514) #10	CCAR1 (ENSUPAG00010008541) #11	STOX1 (ENSUPAG00010008608) #12	DDX50 (ENSUPAG00010008631) ##14	DDX21 (ENSUPAG00010008654) #15	KIFBP (ENSUPAG00010008678) #16	VPS26A (ENSUPAG00010008718) #18	SUPV3L1 (ENSUPAG00010008745) #19	HKDC1 (ENSUPAG00010008781) #21	HK1 (ENSUPAG00010008819) #22	TACR2 (ENSUPAG00010008910) #23	TSPAN15 (ENSUPAG00010008923) #25	NEUROG3 (ENSUPAG00010008933)	FAM241B (ENSUPAG00010008938) #26	ENSUPAG00010008989	COL13A1 (ENSUPAG00010009002) #28
Squirrel	MODERN SPECIES	121	ATOH7 (ENSSTOG00000023613)	PBLD (ENSSTOG00000006239)	HNRNPH3 (ENSSTOG00000011676)	RUFY2 (ENSSTOG00000011678) #7	DNA2 (ENSSTOG00000011694) #8	SLC25A16 (ENSSTOG00000005718) #9	TET1 (ENSSTOG00000001527) #10	CCAR1 (ENSSTOG00000001539) #11	STOX1 (ENSSTOG00000026910) #12	DDX50 (ENSSTOG00000021852) ##14	DDX21 (ENSSTOG00000011572) #15	KIFBP (ENSSTOG00000007759) #16	VPS26A (ENSSTOG00000009077) #18	SUPV3L1 (ENSSTOG00000000503) #19	HKDC1 (ENSSTOG00000000509) #21	HK1 (ENSSTOG00000023877) #22	TACR2 (ENSSTOG00000003412) #23	TSPAN15 (ENSSTOG00000002523) #25	NEUROG3 (ENSSTOG00000026959)	FAM241B (ENSSTOG00000021554) #26	COL13A1 (ENSSTOG00000012691) #28	MACROH2A2 (ENSSTOG00000012745) #29	AIFM2 (ENSSTOG00000012754) #30	TYSND1 (ENSSTOG00000019783) #31	SAR1A (ENSSTOG00000012780) #32	PPA1 (ENSSTOG00000030397) #34	NPFFR1 (ENSSTOG00000021939) #36	LRRC20 (ENSSTOG00000025273) #37	EIF4EBP2 (ENSSTOG00000012937)	NODAL (ENSSTOG00000012946)	PALD1 (ENSSTOG00000012949)
Eurasian red squirrel	MODERN SPECIES	13	DNA2 (ENSSVLG00005004528) #8	ENSSVLG00005004490	SLC25A16 (ENSSVLG00005004417) #9	ENSSVLG00005004373	TET1 (ENSSVLG00005004334) #10	CCAR1 (ENSSVLG00005004161) #11	STOX1 (ENSSVLG00005004061) #12	DDX50 (ENSSVLG00005004023) ##14	ENSSVLG00005003965 #15	ENSSVLG00005003906 #16	ENSSVLG00005003878	SRGN (ENSSVLG00005003868) #17	VPS26A (ENSSVLG00005003836) #18	ENSSVLG00005003789 #19	HKDC1 (ENSSVLG00005003724) #21	HK1 (ENSSVLG00005003638) #22	TACR2 (ENSSVLG00005003553) #23	ENSSVLG00005003530	TSPAN15 (ENSSVLG00005003495) #25	NEUROG3 (ENSSVLG00005003460)	FAM241B (ENSSVLG00005003439) #26	COL13A1 (ENSSVLG00005001757) #28	MACROH2A2 (ENSSVLG00005000480) #29	AIFM2 (ENSSVLG00005000439) #30	TYSND1 (ENSSVLG00005000412) #31	SAR1A (ENSSVLG00005000375) #32	PPA1 (ENSSVLG00005000334) #34	NPFFR1 (ENSSVLG00005000275) #36	LRRC20 (ENSSVLG00005000247) #37	ENSSVLG00005000204	EIF4EBP2 (ENSSVLG00005000187)
Hystricomorpha	ANCESTRAL SPECIES	1	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Hystricomorpha_a	ANCESTRAL SPECIES	3	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Guinea pig	MODERN SPECIES	15	PBLD (ENSCPOG00000019806)	HNRNPH3 (ENSCPOG00000006397)	RUFY2 (ENSCPOG00000006401) #7	DNA2 (ENSCPOG00000026598) #8	SLC25A16 (ENSCPOG00000009009) #9	TET1 (ENSCPOG00000009306) #10	CCAR1 (ENSCPOG00000004124) #11	STOX1 (ENSCPOG00000015591) #12	DDX50 (ENSCPOG00000002131) ##14	DDX21 (ENSCPOG00000015479) #15	KIFBP (ENSCPOG00000031416) #16	SRGN (ENSCPOG00000005120) #17	VPS26A (ENSCPOG00000014441) #18	SUPV3L1 (ENSCPOG00000010044) #19	HKDC1 (ENSCPOG00000035184) #21	HK1 (ENSCPOG00000006004) #22	TACR2 (ENSCPOG00000006011) #23	TSPAN15 (ENSCPOG00000006015) #25	FAM241B (ENSCPOG00000005444) #26	COL13A1 (ENSCPOG00000002575) #28	MACROH2A2 (ENSCPOG00000032624) #29	AIFM2 (ENSCPOG00000034398) #30	TYSND1 (ENSCPOG00000006334) #31	SAR1A (ENSCPOG00000032583) #32	PPA1 (ENSCPOG00000014023) #34	NPFFR1 (ENSCPOG00000019374) #36	LRRC20 (ENSCPOG00000034939) #37	EIF4EBP2 (ENSCPOG00000039594)	NODAL (ENSCPOG00000025772)	PALD1 (ENSCPOG00000027030)	PRF1 (ENSCPOG00000033631)
Hystricomorpha_b	ANCESTRAL SPECIES	3								ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Degu	MODERN SPECIES	46	ZWINT (ENSODEG00000013717)	ENSODEG00000013211	ENSODEG00000012789	ENSODEG00000015108	IPMK (ENSODEG00000012859)	ENSODEG00000013170	ENSODEG00000012772 #12	DDX50 (ENSODEG00000014597) ##14	ENSODEG00000012879 #15	ENSODEG00000013123 #16	ENSODEG00000013479	ENSODEG00000012813 #17	VPS26A (ENSODEG00000012728) #18	SUPV3L1 (ENSODEG00000014392) #19	HKDC1 (ENSODEG00000013763) #21	HK1 (ENSODEG00000013704) #22	TACR2 (ENSODEG00000013359) #23	TSPAN15 (ENSODEG00000014151) #25	NEUROG3 (ENSODEG00000020295)	FAM241B (ENSODEG00000014520) #26	COL13A1 (ENSODEG00000013027) #28	MACROH2A2 (ENSODEG00000013645) #29	AIFM2 (ENSODEG00000012876) #30	TYSND1 (ENSODEG00000013729) #31	SAR1A (ENSODEG00000014517) #32	ENSODEG00000016109 #34	NPFFR1 (ENSODEG00000013333) #36	LRRC20 (ENSODEG00000014868) #37	ENSODEG00000014893	EIF4EBP2 (ENSODEG00000014467)	NODAL (ENSODEG00000013687)
Long-tailed chinchilla	MODERN SPECIES	144								STOX1 (ENSCLAG00000013232) #12	ENSCLAG00000012957 ##14	DDX21 (ENSCLAG00000012235) #15	KIFBP (ENSCLAG00000014167) #16	SRGN (ENSCLAG00000013917) #17	VPS26A (ENSCLAG00000012723) #18	SUPV3L1 (ENSCLAG00000010181) #19	HKDC1 (ENSCLAG00000013331) #21	HK1 (ENSCLAG00000013552) #22	TACR2 (ENSCLAG00000017007) #23	TSPAN15 (ENSCLAG00000011763) #25	FAM241B (ENSCLAG00000011820) #26	COL13A1 (ENSCLAG00000013255) #28	MACROH2A2 (ENSCLAG00000014003) #29	AIFM2 (ENSCLAG00000014328) #30	TYSND1 (ENSCLAG00000013018) #31	SAR1A (ENSCLAG00000012839) #32	ENSCLAG00000014324	PPA1 (ENSCLAG00000013732) #34	NPFFR1 (ENSCLAG00000012308) #36	LRRC20 (ENSCLAG00000013887) #37	EIF4EBP2 (ENSCLAG00000013838)	NODAL (ENSCLAG00000016370)	PALD1 (ENSCLAG00000010318)
Naked mole-rat female	MODERN SPECIES	4												ENSHGLG00000050632 #17	ENSHGLG00000014335 #18	SUPV3L1 (ENSHGLG00000014418) #19	HKDC1 (ENSHGLG00000014508) #21	HK1 (ENSHGLG00000014549) #22	TACR2 (ENSHGLG00000012951) #23	TSPAN15 (ENSHGLG00000040517) #25	NEUROG3 (ENSHGLG00000048434)	FAM241B (ENSHGLG00000036287) #26	COL13A1 (ENSHGLG00000014097) #28	MACROH2A2 (ENSHGLG00000044331) #29	Aifm2 (ENSHGLG00000016729) #30	TYSND1 (ENSHGLG00000039292) #31	SAR1A (ENSHGLG00000050442) #32	PPA1 (ENSHGLG00000011100) #34	NPFFR1 (ENSHGLG00000034434) #36	LRRC20 (ENSHGLG00000039563) #37	ENSHGLG00000011838	NODAL (ENSHGLG00000011988)	ENSHGLG00000042588
Lagomorpha	ANCESTRAL SPECIES	18	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448	ENSGT00530000063725
Rabbit	MODERN SPECIES	9	HNRNPH3 (ENSOCUG00000004443)	RUFY2 (ENSOCUG00000004449) #7	DNA2 (ENSOCUG00000008534) #8	SLC25A16 (ENSOCUG00000008546) #9	TET1 (ENSOCUG00000030256) #10	CCAR1 (ENSOCUG00000013277) #11	STOX1 (ENSOCUG00000002875) #12	DDX50 (ENSOCUG00000002879) ##14	DDX21 (ENSOCUG00000002888) #15	KIFBP (ENSOCUG00000002894) #16	SRGN (ENSOCUG00000024313) #17	VPS26A (ENSOCUG00000001513) #18	ENSOCUG00000022429	SUPV3L1 (ENSOCUG00000004933) #19	HKDC1 (ENSOCUG00000004938) #21	HK1 (ENSOCUG00000006697) #22	TACR2 (ENSOCUG00000006707) #23	TSPAN15 (ENSOCUG00000013992) #25	FAM241B (ENSOCUG00000014875) #26	ENSOCUG00000011655 #28	MACROH2A2 (ENSOCUG00000004773) #29	AIFM2 (ENSOCUG00000004543) #30	SAR1A (ENSOCUG00000004547) #32	PPA1 (ENSOCUG00000016001) #34	NPFFR1 (ENSOCUG00000016014) #36	LRRC20 (ENSOCUG00000016021) #37	EIF4EBP2 (ENSOCUG00000003475)	NODAL (ENSOCUG00000008685)	PALD1 (ENSOCUG00000024110)	PRF1 (ENSOCUG00000006954)	TBATA (ENSOCUG00000017786)
Pika	MODERN SPECIES	2994								ENSOPRG00000001600 #12	DDX50 (ENSOPRG00000001619) ##14	DDX21 (ENSOPRG00000001640) #15	KIFBP (ENSOPRG00000001662) #16	SRGN (ENSOPRG00000001679) #17	VPS26A (ENSOPRG00000001684) #18	SUPV3L1 (ENSOPRG00000001705) #19	HKDC1 (ENSOPRG00000001732) #21	HK1 (ENSOPRG00000001759) #22	TACR2 (ENSOPRG00000001798) #23
Tree shrew	MODERN SPECIES	986												ENSTBEG00000015293 #17	VPS26A (ENSTBEG00000015348) #18	SUPV3L1 (ENSTBEG00000015538) #19	HKDC1 (ENSTBEG00000016131) #21	HK1 (ENSTBEG00000016359) #22	ENSTBEG00000016798 #23
Laurasiatheria	ANCESTRAL SPECIES	14	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00980000202026
Laurasiatheria_a	ANCESTRAL SPECIES	15	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00980000202026
Artiodactyla	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00980000202026
Suina	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00980000202026	ENSGT00940000160223
Pig	MODERN SPECIES	5	PBLD (ENSSSCG00000025876)	HNRNPH3 (ENSSSCG00000010238)	RUFY2 (ENSSSCG00000010239) #7	DNA2 (ENSSSCG00000010240) #8	SLC25A16 (ENSSSCG00000022303) #9	TET1 (ENSSSCG00000010241) #10	CCAR1 (ENSSSCG00000010243) #11	STOX1 (ENSSSCG00000010245) #12	DDX50 (ENSSSCG00000010246) ##14	DDX21 (ENSSSCG00000010247) #15	KIFBP (ENSSSCG00000010248) #16	SRGN (ENSSSCG00000023374) #17	VPS26A (ENSSSCG00000010250) #18	SUPV3L1 (ENSSSCG00000010251) #19	HKDC1 (ENSSSCG00000010252) #21	HK1 (ENSSSCG00000010253) #22	TACR2 (ENSSSCG00000010254) #23	TSPAN15 (ENSSSCG00000036152) #25	ENSSSCG00000040498 #26	NEUROG3 (ENSSSCG00000034488)	COL13A1 (ENSSSCG00000010256) #28	MACROH2A2 (ENSSSCG00000031713) #29	AIFM2 (ENSSSCG00000010258) #30	TYSND1 (ENSSSCG00000010259) #31	SAR1A (ENSSSCG00000010260) #32	PPA1 (ENSSSCG00000010261) #34	NPFFR1 (ENSSSCG00000010266) #36	LRRC20 (ENSSSCG00000010267) #37	EIF4EBP2 (ENSSSCG00000034444)	ENSSSCG00000051352	NODAL (ENSSSCG00000039399)
Chacoan peccary	MODERN SPECIES	975	PBLD (ENSCWAG00000021690)	HNRNPH3 (ENSCWAG00000021685)	RUFY2 (ENSCWAG00000021680) #7	DNA2 (ENSCWAG00000021673) #8	SLC25A16 (ENSCWAG00000021668) #9	ENSCWAG00000021666 #10	CCAR1 (ENSCWAG00000021654) #11	STOX1 (ENSCWAG00000021642) #12	DDX50 (ENSCWAG00000021635) ##14	DDX21 (ENSCWAG00000021625) #15	KIFBP (ENSCWAG00000021616) #16	SRGN (ENSCWAG00000021612) #17	VPS26A (ENSCWAG00000021605) #18	SUPV3L1 (ENSCWAG00000021597) #19	HKDC1 (ENSCWAG00000021588) #21	HK1 (ENSCWAG00000021572) #22	TACR2 (ENSCWAG00000021559) #23	TSPAN15 (ENSCWAG00000021555) #25	NEUROG3 (ENSCWAG00000021549)	FAM241B (ENSCWAG00000021547) #26	COL13A1 (ENSCWAG00000016547) #28	MACROH2A2 (ENSCWAG00000016038) #29	AIFM2 (ENSCWAG00000016003) #30	TYSND1 (ENSCWAG00000015978) #31	SAR1A (ENSCWAG00000015906) #32	ENSCWAG00000015835 #34	NPFFR1 (ENSCWAG00000015796) #36	LRRC20 (ENSCWAG00000015697) #37	EIF4EBP2 (ENSCWAG00000015658)	NODAL (ENSCWAG00000015637)	PALD1 (ENSCWAG00000015496)
Artiodactyla_a	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Artiodactyla_b	ANCESTRAL SPECIES	13	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Cetacea	ANCESTRAL SPECIES	15	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Odontoceti	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Odontoceti_a	ANCESTRAL SPECIES	11	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Odontoceti_b	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Monodontidae	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Beluga whale	MODERN SPECIES	65	RUFY2 (ENSDLEG00000010171) #7	SLC25A16 (ENSDLEG00000009240) #8	ENSDLEG00000009139	TET1 (ENSDLEG00000009112) #10	CCAR1 (ENSDLEG00000008968) #11	ENSDLEG00000008946	STOX1 (ENSDLEG00000008804) #12	ENSDLEG00000008782	DDX50 (ENSDLEG00000008715) ##14	DDX21 (ENSDLEG00000008677) #15	KIFBP (ENSDLEG00000008645) #16	SRGN (ENSDLEG00000008630) #17	ENSDLEG00000008599 #18	SUPV3L1 (ENSDLEG00000008552) #19	HKDC1 (ENSDLEG00000008490) #21	HK1 (ENSDLEG00000008408) #22	TACR2 (ENSDLEG00000008300) #23	TSPAN15 (ENSDLEG00000008241) #25	NEUROG3 (ENSDLEG00000008229)	FAM241B (ENSDLEG00000008202) #26	COL13A1 (ENSDLEG00000008033) #28	MACROH2A2 (ENSDLEG00000008011) #29	AIFM2 (ENSDLEG00000007993) #30	TYSND1 (ENSDLEG00000007982) #31	SAR1A (ENSDLEG00000007962) #32	PPA1 (ENSDLEG00000007942) #34	NPFFR1 (ENSDLEG00000019219) #36	LRRC20 (ENSDLEG00000019204) #37	EIF4EBP2 (ENSDLEG00000019193)	NODAL (ENSDLEG00000019187)	PALD1 (ENSDLEG00000019170)
Narwhal	MODERN SPECIES	311	DNA2 (ENSMMNG00015017542) #8	SLC25A16 (ENSMMNG00015017583) #9	TET1 (ENSMMNG00015017620) #10	ENSMMNG00015017672	CCAR1 (ENSMMNG00015017705) #11	ENSMMNG00015017786	STOX1 (ENSMMNG00015017814) #12	ENSMMNG00015017869	DDX50 (ENSMMNG00015017887) ##14	DDX21 (ENSMMNG00015017919) #15	KIFBP (ENSMMNG00015018048) #16	SRGN (ENSMMNG00015018086) #17	ENSMMNG00015018123 #18	SUPV3L1 (ENSMMNG00015018179) #19	HKDC1 (ENSMMNG00015018235) #21	HK1 (ENSMMNG00015018338) #22	TACR2 (ENSMMNG00015018482) #23	TSPAN15 (ENSMMNG00015018513) #25	NEUROG3 (ENSMMNG00015018559)	FAM241B (ENSMMNG00015018581) #26	COL13A1 (ENSMMNG00015019392) #28	MACROH2A2 (ENSMMNG00015021163) #29	AIFM2 (ENSMMNG00015021184) #30	TYSND1 (ENSMMNG00015021209) #31	SAR1A (ENSMMNG00015021225) #32	PPA1 (ENSMMNG00015021247) #34	NPFFR1 (ENSMMNG00015021258) #36	LRRC20 (ENSMMNG00015021275) #37	ENSMMNG00015021284	EIF4EBP2 (ENSMMNG00015021294)	NODAL (ENSMMNG00015021300)
Vaquita	MODERN SPECIES	7	HNRNPH3 (ENSPSNG00000017903)	RUFY2 (ENSPSNG00000018016) #7	DNA2 (ENSPSNG00000018291) #8	TET1 (ENSPSNG00000018401) #10	ENSPSNG00000018517	CCAR1 (ENSPSNG00000018574) #11	ENSPSNG00000018685	STOX1 (ENSPSNG00000018733) #12	DDX50 (ENSPSNG00000018841) ##14	DDX21 (ENSPSNG00000018882) #15	KIFBP (ENSPSNG00000018956) #16	SRGN (ENSPSNG00000019006) #17	VPS26A (ENSPSNG00000019043) #18	SUPV3L1 (ENSPSNG00000019123) #19	HKDC1 (ENSPSNG00000019172) #21	HK1 (ENSPSNG00000019292) #22	TACR2 (ENSPSNG00000019582) #23	TSPAN15 (ENSPSNG00000019618) #25	NEUROG3 (ENSPSNG00000019648)	FAM241B (ENSPSNG00000019661) #26	COL13A1 (ENSPSNG00000019849) #28	MACROH2A2 (ENSPSNG00000020131) #29	AIFM2 (ENSPSNG00000020177) #30	TYSND1 (ENSPSNG00000020220) #31	SAR1A (ENSPSNG00000020248) #32	PPA1 (ENSPSNG00000020295) #34	NPFFR1 (ENSPSNG00000020327) #36	LRRC20 (ENSPSNG00000020377) #37	ENSPSNG00000020439	ENSPSNG00000020464	NODAL (ENSPSNG00000020491)
Dolphin	MODERN SPECIES	116												SRGN (ENSTTRG00000008173) #17	VPS26A (ENSTTRG00000008175) #18	SUPV3L1 (ENSTTRG00000008183) #19	HKDC1 (ENSTTRG00000008192) #21	HK1 (ENSTTRG00000008202) #22	TACR2 (ENSTTRG00000008211) #23	TSPAN15 (ENSTTRG00000008213) #25	NEUROG3 (ENSTTRG00000008216)	FAM241B (ENSTTRG00000008217) #26
Sperm whale	MODERN SPECIES	12	PRF1 (ENSPCTG00005015153)	PALD1 (ENSPCTG00005014988)	NODAL (ENSPCTG00005014924)	EIF4EBP2 (ENSPCTG00005014870)	ENSPCTG00005014824	ENSPCTG00005014776	ENSPCTG00005014625 #37	PPA1 (ENSPCTG00005014580) #34	SAR1A (ENSPCTG00005014528) #32	TYSND1 (ENSPCTG00005014466) #31	AIFM2 (ENSPCTG00005014407) #30	MACROH2A2 (ENSPCTG00005014364) #29	COL13A1 (ENSPCTG00005007462) #28	FAM241B (ENSPCTG00005006794) #26	NEUROG3 (ENSPCTG00005006773)	ENSPCTG00005006757 #22	TACR2 (ENSPCTG00005006726) #23	HKDC1 (ENSPCTG00005006659) #21	SUPV3L1 (ENSPCTG00005006597) #19	VPS26A (ENSPCTG00005006530) #18	SRGN (ENSPCTG00005006498) #17	DDX21 (ENSPCTG00005006363) #15	DDX50 (ENSPCTG00005006309) ##14	STOX1 (ENSPCTG00005006234) #12	CCAR1 (ENSPCTG00005005994) #11	TET1 (ENSPCTG00005005923) #10	DNA2 (ENSPCTG00005005526) #8	HNRNPH3 (ENSPCTG00005005402)	RUFY2 (ENSPCTG00005005150) #7	PBLD (ENSPCTG00005005019)	ATOH7 (ENSPCTG00005004994)
Blue whale	MODERN SPECIES	7	RUFY2 (ENSBMSG00010022368) #7	DNA2 (ENSBMSG00010022364) #8	SLC25A16 (ENSBMSG00010022363) #9	ENSBMSG00010022360	TET1 (ENSBMSG00010022359) #10	CCAR1 (ENSBMSG00010022355) #11	ENSBMSG00010022352	STOX1 (ENSBMSG00010022348) #12	ENSBMSG00010022344 ##14	DDX21 (ENSBMSG00010022341) #15	KIFBP (ENSBMSG00010022336) #16	SRGN (ENSBMSG00010022334) #17	ENSBMSG00010022332 #18	SUPV3L1 (ENSBMSG00010022325) #19	HKDC1 (ENSBMSG00010022316) #21	HK1 (ENSBMSG00010022300) #22	TACR2 (ENSBMSG00010022290) #23	TSPAN15 (ENSBMSG00010022282) #25	NEUROG3 (ENSBMSG00010022279)	FAM241B (ENSBMSG00010022278) #26	COL13A1 (ENSBMSG00010018272) #28	MACROH2A2 (ENSBMSG00010017113) #29	AIFM2 (ENSBMSG00010017088) #30	TYSND1 (ENSBMSG00010017063) #31	SAR1A (ENSBMSG00010017041) #32	ENSBMSG00010017012 #34	NPFFR1 (ENSBMSG00010016996) #36	LRRC20 (ENSBMSG00010016966) #37	ENSBMSG00010016948	EIF4EBP2 (ENSBMSG00010016927)	NODAL (ENSBMSG00010016907)
Pecora	ANCESTRAL SPECIES	12	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Percora_a	ANCESTRAL SPECIES	14	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Bovidae	ANCESTRAL SPECIES	27	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Bovinae	ANCESTRAL SPECIES	30	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Bos	ANCESTRAL SPECIES	27	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Bos_b	ANCESTRAL SPECIES	32	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Hybrid Bos Indicus	MODERN SPECIES	20	RUFY2 (ENSBIXG00005019210) #7	DNA2 (ENSBIXG00005019070) #8	SLC25A16 (ENSBIXG00005018942) #9	TET1 (ENSBIXG00005018918) #10	CCAR1 (ENSBIXG00005003072) #11	STOX1 (ENSBIXG00005018781) #12	ENSBIXG00005018774	DDX50 (ENSBIXG00005003053) ##14	DDX21 (ENSBIXG00005003041) #15	KIFBP (ENSBIXG00005003035) #16	ENSBIXG00005003032	SRGN (ENSBIXG00005018681) #17	ENSBIXG00005018654	VPS26A (ENSBIXG00005006392) #18	SUPV3L1 (ENSBIXG00005018575) #19	HK1 (ENSBIXG00005018464) #22	TACR2 (ENSBIXG00005017735) #23	TSPAN15 (ENSBIXG00005017679) #25	NEUROG3 (ENSBIXG00005017625)	ENSBIXG00005017614 #26	COL13A1 (ENSBIXG00005002845) #28	MACROH2A2 (ENSBIXG00005017229) #29	AIFM2 (ENSBIXG00005017200) #30	TYSND1 (ENSBIXG00005017117) #31	SAR1A (ENSBIXG00005002778) #32	ENSBIXG00005002767	PPA1 (ENSBIXG00005017018) #34	NPFFR1 (ENSBIXG00005016996) #36	LRRC20 (ENSBIXG00005016961) #37	EIF4EBP2 (ENSBIXG00005007045)	NODAL (ENSBIXG00005016854)
Cow	MODERN SPECIES	20	PBLD (ENSBTAG00000014315)	HNRNPH3 (ENSBTAG00000014316)	RUFY2 (ENSBTAG00000002614) #7	DNA2 (ENSBTAG00000002620) #8	SLC25A16 (ENSBTAG00000023054) #9	TET1 (ENSBTAG00000037756) #10	CCAR1 (ENSBTAG00000033457) #11	STOX1 (ENSBTAG00000019028) #12	DDX50 (ENSBTAG00000033413) ##14	DDX21 (ENSBTAG00000014558) #15	KIFBP (ENSBTAG00000014561) #16	SRGN (ENSBTAG00000017863) #17	VPS26A (ENSBTAG00000016882) #18	SUPV3L1 (ENSBTAG00000001044) #19	HKDC1 (ENSBTAG00000033398) #21	HK1 (ENSBTAG00000012380) #22	TACR2 (ENSBTAG00000021664) #23	TSPAN15 (ENSBTAG00000000224) #25	NEUROG3 (ENSBTAG00000006431)	FAM241B (ENSBTAG00000016527) #26	COL13A1 (ENSBTAG00000011741) #28	MACROH2A2 (ENSBTAG00000001163) #29	AIFM2 (ENSBTAG00000001165) #30	TYSND1 (ENSBTAG00000038845) #31	SAR1A (ENSBTAG00000016858) #32	PPA1 (ENSBTAG00000007836) #34	NPFFR1 (ENSBTAG00000010930) #36	LRRC20 (ENSBTAG00000005666) #37	EIF4EBP2 (ENSBTAG00000053726)	NODAL (ENSBTAG00000013090)	PALD1 (ENSBTAG00000008583)
Bos_a	ANCESTRAL SPECIES	25	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.h #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Wild yak	MODERN SPECIES	1622																HK1 (ENSBMUG00000014798) #22	TACR2 (ENSBMUG00000014822) #23	TSPAN15 (ENSBMUG00000014833) #25	NEUROG3 (ENSBMUG00000014847)	FAM241B (ENSBMUG00000014859) #26	COL13A1 (ENSBMUG00000015879) #28	MACROH2A2 (ENSBMUG00000016549) #29	AIFM2 (ENSBMUG00000016562) #30	ENSBMUG00000016573 #31	SAR1A (ENSBMUG00000016616) #32	PPA1 (ENSBMUG00000016671) #34	NPFFR1 (ENSBMUG00000016685) #36	LRRC20 (ENSBMUG00000016738) #37	EIF4EBP2 (ENSBMUG00000016770)	NODAL (ENSBMUG00000016793)	PALD1 (ENSBMUG00000016854)
Domestic yak	MODERN SPECIES	19	HNRNPH3 (ENSBGRG00000008863)	RUFY2 (ENSBGRG00000009040) #7	DNA2 (ENSBGRG00000009571) #8	SLC25A16 (ENSBGRG00000009844) #9	TET1 (ENSBGRG00000009961) #10	CCAR1 (ENSBGRG00000010118) #11	STOX1 (ENSBGRG00000010395) #12	DDX50 (ENSBGRG00000010519) ##14	DDX21 (ENSBGRG00000010744) #15	KIFBP (ENSBGRG00000011050) #16	ENSBGRG00000011142	SRGN (ENSBGRG00000011187) #17	ENSBGRG00000011297	VPS26A (ENSBGRG00000011318) #18	SUPV3L1 (ENSBGRG00000011577) #19	HK1 (ENSBGRG00000011917) #22	TACR2 (ENSBGRG00000013194) #23	TSPAN15 (ENSBGRG00000013254) #25	NEUROG3 (ENSBGRG00000013502)	FAM241B (ENSBGRG00000013521) #26	COL13A1 (ENSBGRG00000013873) #28	MACROH2A2 (ENSBGRG00000021658) #29	AIFM2 (ENSBGRG00000021724) #30	TYSND1 (ENSBGRG00000021766) #31	ENSBGRG00000021791 #32	PPA1 (ENSBGRG00000021913) #34	NPFFR1 (ENSBGRG00000022142) #36	LRRC20 (ENSBGRG00000022204) #37	EIF4EBP2 (ENSBGRG00000022345)	NODAL (ENSBGRG00000022380)	PALD1 (ENSBGRG00000022406)
American bison	MODERN SPECIES	3223	HNRNPH3 (ENSBBBG00000023716)	RUFY2 (ENSBBBG00000007288) #7	DNA2 (ENSBBBG00000008416) #8	SLC25A16 (ENSBBBG00000000317) #9	TET1 (ENSBBBG00000023517) #10	ENSBBBG00000023487	CCAR1 (ENSBBBG00000006134) #11	STOX1 (ENSBBBG00000006106) #12	DDX50 (ENSBBBG00000006103) ##14	ENSBBBG00000023312 #15	KIFBP (ENSBBBG00000006082) #16	SRGN (ENSBBBG00000006076) #17	VPS26A (ENSBBBG00000023209) #18	SUPV3L1 (ENSBBBG00000000358) #19	HKDC1 (ENSBBBG00000000381) #21	HK1 (ENSBBBG00000000446) #22	TACR2 (ENSBBBG00000006029) #23	TSPAN15 (ENSBBBG00000022956) #25	NEUROG3 (ENSBBBG00000006024)	FAM241B (ENSBBBG00000022921) #26	COL13A1 (ENSBBBG00000022816) #28	MACROH2A2 (ENSBBBG00000021899) #29	AIFM2 (ENSBBBG00000007154) #30	SAR1A (ENSBBBG00000021871) #32	PPA1 (ENSBBBG00000021831) #34	LRRC20 (ENSBBBG00000021778) #37	EIF4EBP2 (ENSBBBG00000021726)	NODAL (ENSBBBG00000005770)	PALD1 (ENSBBBG00000021700)	PRF1 (ENSBBBG00000007332)	ADAMTS14 (ENSBBBG00000021657)
Caprinae	ANCESTRAL SPECIES	26	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043.bb.a.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Goat	MODERN SPECIES	20	ENSCHIG00000026467	RUFY2 (ENSCHIG00000010345) #7	DNA2 (ENSCHIG00000018956) #8	SLC25A16 (ENSCHIG00000013881) #9	TET1 (ENSCHIG00000009920) #10	CCAR1 (ENSCHIG00000000354) #11	STOX1 (ENSCHIG00000000317) #12	DDX50 (ENSCHIG00000000285) ##14	ENSCHIG00000000248 #15	ENSCHIG00000000209	ENSCHIG00000000174 #16	SRGN (ENSCHIG00000000139) #17	VPS26A (ENSCHIG00000000108) #18	SUPV3L1 (ENSCHIG00000000074) #19	HKDC1 (ENSCHIG00000010678) #21	HK1 (ENSCHIG00000000496) #22	TACR2 (ENSCHIG00000021982) #23	TSPAN15 (ENSCHIG00000019354) #25	NEUROG3 (ENSCHIG00000020271)	FAM241B (ENSCHIG00000014391) #26	COL13A1 (ENSCHIG00000000253) #28	MACROH2A2 (ENSCHIG00000000171) #29	AIFM2 (ENSCHIG00000000099) #30	TYSND1 (ENSCHIG00000000064) #31	ENSCHIG00000024778	SAR1A (ENSCHIG00000018882) #32	PPA1 (ENSCHIG00000016191) #34	NPFFR1 (ENSCHIG00000009482) #36	LRRC20 (ENSCHIG00000009889) #37	EIF4EBP2 (ENSCHIG00000000417)	NODAL (ENSCHIG00000000383)
Rambouillet Sheep	MODERN SPECIES	17	ENSOARG00020008090	HNRNPH3 (ENSOARG00020008115)	RUFY2 (ENSOARG00020008371) #7	DNA2 (ENSOARG00020009086) #8	SLC25A16 (ENSOARG00020009295) #9	TET1 (ENSOARG00020009369) #10	CCAR1 (ENSOARG00020009447) #11	STOX1 (ENSOARG00020009603) #12	DDX50 (ENSOARG00020009681) ##14	DDX21 (ENSOARG00020009723) #15	KIFBP (ENSOARG00020009775) #16	SRGN (ENSOARG00020009868) #17	VPS26A (ENSOARG00020009945) #18	SUPV3L1 (ENSOARG00020010091) #19	HKDC1 (ENSOARG00020010248) #21	HK1 (ENSOARG00020010440) #22	TACR2 (ENSOARG00020011038) #23	TSPAN15 (ENSOARG00020011116) #25	NEUROG3 (ENSOARG00020011183)	FAM241B (ENSOARG00020011204) #26	ENSOARG00020011259	COL13A1 (ENSOARG00020011395) #28	H2AFY2 (ENSOARG00020012361) #29	TYSND1 (ENSOARG00020012522) #31	SAR1A (ENSOARG00020012573) #32	PPA1 (ENSOARG00020012693) #34	NPFFR1 (ENSOARG00020012791) #36	LRRC20 (ENSOARG00020012862) #37	EIF4EBP2 (ENSOARG00020013114)	NODAL (ENSOARG00020013160)	PALD1 (ENSOARG00020013220)
Siberian musk deer	MODERN SPECIES	1227	HNRNPH3 (ENSMMSG00000022944)	RUFY2 (ENSMMSG00000022973) #7	ENSMMSG00000023068	DNA2 (ENSMMSG00000023076) #8	SLC25A16 (ENSMMSG00000023105) #9	TET1 (ENSMMSG00000023113) #10	CCAR1 (ENSMMSG00000023140) #11	STOX1 (ENSMMSG00000023166) #12	DDX50 (ENSMMSG00000023194) ##14	ENSMMSG00000023230 #15	KIFBP (ENSMMSG00000023245) #16	SRGN (ENSMMSG00000023265) #17	VPS26A (ENSMMSG00000023286) #18	SUPV3L1 (ENSMMSG00000023304) #19	HKDC1 (ENSMMSG00000023321) #21	HK1 (ENSMMSG00000023342) #22	TACR2 (ENSMMSG00000023382) #23	TSPAN15 (ENSMMSG00000023392) #25	NEUROG3 (ENSMMSG00000023401)	FAM241B (ENSMMSG00000023406) #26	COL13A1 (ENSMMSG00000023599) #28	MACROH2A2 (ENSMMSG00000024354) #29	AIFM2 (ENSMMSG00000024356) #30	TYSND1 (ENSMMSG00000024358) #31	SAR1A (ENSMMSG00000024360) #32	PPA1 (ENSMMSG00000024361) #34	NPFFR1 (ENSMMSG00000007616) #36	LRRC20 (ENSMMSG00000007657) #37	EIF4EBP2 (ENSMMSG00000007728)	NODAL (ENSMMSG00000007744)	PALD1 (ENSMMSG00000007768)
Yarkand deer	MODERN SPECIES	6	HNRNPH3 (ENSCHYG00000005187)	RUFY2 (ENSCHYG00000005352) #7	ENSCHYG00000005831	DNA2 (ENSCHYG00000005873) #8	SLC25A16 (ENSCHYG00000005961) #9	TET1 (ENSCHYG00000005993) #10	ENSCHYG00000006068	ENSCHYG00000006104 #11	STOX1 (ENSCHYG00000006190) #12	ENSCHYG00000006256 #15	KIFBP (ENSCHYG00000006579) #16	SRGN (ENSCHYG00000006660) #17	VPS26A (ENSCHYG00000006730) #18	SUPV3L1 (ENSCHYG00000006830) #19	HKDC1 (ENSCHYG00000006914) #21	HK1 (ENSCHYG00000007068) #22	TACR2 (ENSCHYG00000007301) #23	TSPAN15 (ENSCHYG00000007342) #25	NEUROG3 (ENSCHYG00000007369)	ENSCHYG00000007385 #26	COL13A1 (ENSCHYG00000007754) #28	ENSCHYG00000017348 #29	AIFM2 (ENSCHYG00000017431) #30	TYSND1 (ENSCHYG00000017542) #31	ENSCHYG00000017615 #32	ENSCHYG00000017704 #34	NPFFR1 (ENSCHYG00000017886) #36	LRRC20 (ENSCHYG00000017938) #37	EIF4EBP2 (ENSCHYG00000018197)	NODAL (ENSCHYG00000018236)	PALD1 (ENSCHYG00000018335)
Camelidae	ANCESTRAL SPECIES	4	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199.a #37	ENSGT00940000155342	ENSGT00940000160223
Arabian camel	MODERN SPECIES	2	PBLD (ENSCDRG00005016819)	ENSCDRG00005016908	HNRNPH3 (ENSCDRG00005016939)	RUFY2 (ENSCDRG00005017030) #7	DNA2 (ENSCDRG00005017439) #8	SLC25A16 (ENSCDRG00005017500) #9	TET1 (ENSCDRG00005017530) #10	CCAR1 (ENSCDRG00005017590) #11	STOX1 (ENSCDRG00005017705) #12	DDX50 (ENSCDRG00005017722) ##14	DDX21 (ENSCDRG00005017845) #15	KIFBP (ENSCDRG00005006621) #16	SRGN (ENSCDRG00005006717) #17	ENSCDRG00005006767 #18	SUPV3L1 (ENSCDRG00005006868) #19	HK1 (ENSCDRG00005006963) #22	TACR2 (ENSCDRG00005007405) #23	TSPAN15 (ENSCDRG00005007468) #25	NEUROG3 (ENSCDRG00005007536)	FAM241B (ENSCDRG00005007554) #26	COL13A1 (ENSCDRG00005007677) #28	MACROH2A2 (ENSCDRG00005008428) #29	AIFM2 (ENSCDRG00005008474) #30	TYSND1 (ENSCDRG00005008594) #31	ENSCDRG00005008635	SAR1A (ENSCDRG00005008661) #32	PPA1 (ENSCDRG00005008721) #34	ENSCDRG00005008795	NPFFR1 (ENSCDRG00005008809) #36	ENSCDRG00005008949 #37	EIF4EBP2 (ENSCDRG00005009176)
Alpaca	MODERN SPECIES	1654								STOX1 (ENSVPAG00000000625) #12	DDX50 (ENSVPAG00000000626) ##14	DDX21 (ENSVPAG00000000627) #15	KIFBP (ENSVPAG00000000628) #16	SRGN (ENSVPAG00000000629) #17	VPS26A (ENSVPAG00000000630) #18	SUPV3L1 (ENSVPAG00000000631) #19	HKDC1 (ENSVPAG00000000632) #21	HK1 (ENSVPAG00000000633) #22	TACR2 (ENSVPAG00000000634) #23
Laurasiatheria_b	ANCESTRAL SPECIES	15	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00950000183755	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Carnivora	ANCESTRAL SPECIES	16	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00950000183755	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Caniformia	ANCESTRAL SPECIES	13	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00950000183755	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Caniformia_b	ANCESTRAL SPECIES	10	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
Ursidae	ANCESTRAL SPECIES	5	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a	ENSGT00390000000885.a #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Giant Panda	DUPLICATION
Giant Panda	MODERN SPECIES	16	HNRNPH3 (ENSAMEG00000018064)	RUFY2 (ENSAMEG00000018039) #7	DNA2 (ENSAMEG00000018028) #8	SLC25A16 (ENSAMEG00000018012) #9	TET1 (ENSAMEG00000018009) #10	CCAR1 (ENSAMEG00000018003) #11	STOX1 (ENSAMEG00000018002) #12	DDX50 (ENSAMEG00000017992) ##14	DDX21 (ENSAMEG00000017978) #15	KIFBP (ENSAMEG00000017970) #16	ENSAMEG00000027234	ENSAMEG00000017969 #17	VPS26A (ENSAMEG00000017963) #18	SUPV3L1 (ENSAMEG00000017957) #19	HKDC1 (ENSAMEG00000017949) #21	ENSAMEG00000017924 #22	TACR2 (ENSAMEG00000017918) #23	TSPAN15 (ENSAMEG00000017910) #25	NEUROG3 (ENSAMEG00000019033)	FAM241B (ENSAMEG00000017908) #26	COL13A1 (ENSAMEG00000017892) #28	MACROH2A2 (ENSAMEG00000017881) #29	AIFM2 (ENSAMEG00000017876) #30	ENSAMEG00000030241	SAR1A (ENSAMEG00000017868) #32	PPA1 (ENSAMEG00000017855) #34	NPFFR1 (ENSAMEG00000017851) #36	LRRC20 (ENSAMEG00000017850) #37	ENSAMEG00000024095	NODAL (ENSAMEG00000017846)	PALD1 (ENSAMEG00000017827)
Giant Panda	MODERN SPECIES	362																ENSAMEG00000025059 #22
Ursus	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885.a #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448	ENSGT00530000063725
American black bear	MODERN SPECIES	2544															HKDC1 (ENSUAMG00000015674) #21	HK1 (ENSUAMG00000015673) #22	TACR2 (ENSUAMG00000015662) #23
Polar bear	MODERN SPECIES	197	PBLD (ENSUMAG00000007253)	HNRNPH3 (ENSUMAG00000007264)	RUFY2 (ENSUMAG00000007270) #7	DNA2 (ENSUMAG00000007318) #8	SLC25A16 (ENSUMAG00000007525) #9	TET1 (ENSUMAG00000007531) #10	CCAR1 (ENSUMAG00000007561) #11	STOX1 (ENSUMAG00000007711) #12	DDX50 (ENSUMAG00000007726) ##14	DDX21 (ENSUMAG00000007735) #15	KIFBP (ENSUMAG00000007746) #16	ENSUMAG00000007749 #17	VPS26A (ENSUMAG00000007756) #18	SUPV3L1 (ENSUMAG00000007773) #19	HKDC1 (ENSUMAG00000007779) #21	HK1 (ENSUMAG00000007789) #22	TACR2 (ENSUMAG00000007801) #23	TSPAN15 (ENSUMAG00000007831) #25	NEUROG3 (ENSUMAG00000007852)	FAM241B (ENSUMAG00000007856) #26	MACROH2A2 (ENSUMAG00000007882) #29	AIFM2 (ENSUMAG00000007905) #30	ENSUMAG00000007919	SAR1A (ENSUMAG00000007921) #32	PPA1 (ENSUMAG00000007936) #34	LRRC20 (ENSUMAG00000007964) #37	EIF4EBP2 (ENSUMAG00000007968)	ENSUMAG00000007977	PALD1 (ENSUMAG00000008007)	PRF1 (ENSUMAG00000008031)	ADAMTS14 (ENSUMAG00000008041)
Mustelinae	ANCESTRAL SPECIES	31	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935.s #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00910000146657	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
American mink	MODERN SPECIES	11	RUFY2 (ENSNVIG00000013083) #7	DNA2 (ENSNVIG00000012601) #8	B4DPV4 (ENSNVIG00000012573) #9	TET1 (ENSNVIG00000012553) #10	ENSNVIG00000012539 #11	STOX1 (ENSNVIG00000012510) #12	DDX50 (ENSNVIG00000012485) ##14	DDX21 (ENSNVIG00000012428) #15	KBP (ENSNVIG00000012416) #16	SRGN (ENSNVIG00000012411) #17	VPS26A (ENSNVIG00000012407) #18	SUPV3L1 (ENSNVIG00000012395) #19	HKDC1 (ENSNVIG00000012370) #21	ENSNVIG00000012360	ENSNVIG00000012359	HK1 (ENSNVIG00000012071) #22	TACR2 (ENSNVIG00000012055) #23	TSPAN15 (ENSNVIG00000012025) #25	NEUROG3 (ENSNVIG00000012019)	CJ035 (ENSNVIG00000012014) #26	COL13A1 (ENSNVIG00000011117) #28	MACROH2A2 (ENSNVIG00000011058) #29	AIFM2 (ENSNVIG00000011030) #30	TYSND1 (ENSNVIG00000011017) #31	ENSNVIG00000011013	SAR1A (ENSNVIG00000010997) #32	PPA1 (ENSNVIG00000010989) #34	NPFFR1 (ENSNVIG00000010976) #36	LRRC20 (ENSNVIG00000010945) #37	EIF4EBP2 (ENSNVIG00000010939)	NODAL (ENSNVIG00000010928)
Ferret	MODERN SPECIES	310						ENSMPUG00000004731 #10	CCAR1 (ENSMPUG00000004618) #11	STOX1 (ENSMPUG00000004614) #12	DDX21 (ENSMPUG00000004603) #15	KIFBP (ENSMPUG00000004600) #16	DDX50 (ENSMPUG00000004589) ##14	ENSMPUG00000004519 #18	SUPV3L1 (ENSMPUG00000004499) #19	ENSMPUG00000004488 ##22	HKDC1 (ENSMPUG00000004472) #21	HK1 (ENSMPUG00000004457) #22	TACR2 (ENSMPUG00000004421) #23	ENSMPUG00000019700	TSPAN15 (ENSMPUG00000004403) #25	NEUROG3 (ENSMPUG00000019699)	FAM241B (ENSMPUG00000004392) #26	COL13A1 (ENSMPUG00000004367) #28	MACROH2A2 (ENSMPUG00000004359) #29	AIFM2 (ENSMPUG00000004351) #30	TYSND1 (ENSMPUG00000004346) #31	SAR1A (ENSMPUG00000004338) #32	PPA1 (ENSMPUG00000004327) #34	NPFFR1 (ENSMPUG00000004321) #36	ENSMPUG00000004315	LRRC20 (ENSMPUG00000004310) #37	EIF4EBP2 (ENSMPUG00000004300)
Canidae	ANCESTRAL SPECIES	7	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00950000183755	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Canis_lupus	ANCESTRAL SPECIES	12	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b.v #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Dog	MODERN SPECIES	32	PBLD (ENSCAFG00845001864)	HNRNPH3 (ENSCAFG00845001919)	RUFY2 (ENSCAFG00845002043) #7	DNA2 (ENSCAFG00845002233) #8	SLC25A16 (ENSCAFG00845002366) #9	TET1 (ENSCAFG00845002465) #10	CCAR1 (ENSCAFG00845002579) #11	STOX1 (ENSCAFG00845002777) #12	DDX21 (ENSCAFG00845002984) ##14	DDX21 (ENSCAFG00845003052) #15	KIFBP (ENSCAFG00845003187) #16	SRGN (ENSCAFG00845003232) #17	VPS26A (ENSCAFG00845003265) #18	SUPV3L1 (ENSCAFG00845003373) #19	HKDC1 (ENSCAFG00845003417) #21	HK1 (ENSCAFG00845003494) #22	TACR2 (ENSCAFG00845003627) #23	TSPAN15 (ENSCAFG00845003657) #25	NEUROG3 (ENSCAFG00845003696)	FAM241B (ENSCAFG00845003706) #26	COL13A1 (ENSCAFG00845003810) #28	MACROH2A2 (ENSCAFG00845003908) #29	ENSCAFG00845003998 #30	TYSND1 (ENSCAFG00845004061) #31	SAR1A (ENSCAFG00845004124) #32	ENSCAFG00845004189 #34	NPFFR1 (ENSCAFG00845004215) #36	LRRC20 (ENSCAFG00845004236) #37	EIF4EBP2 (ENSCAFG00845004263)	NODAL (ENSCAFG00845004277)	PALD1 (ENSCAFG00845004298)
Dingo	MODERN SPECIES	324	RUFY2 (ENSCAFG00020026172) #7	DNA2 (ENSCAFG00020026143) #8	SLC25A16 (ENSCAFG00020026134) #9	TET1 (ENSCAFG00020026131) #10	CCAR1 (ENSCAFG00020026013) #11	STOX1 (ENSCAFG00020025981) #12	DDX50 (ENSCAFG00020025977) ##14	ENSCAFG00020025973 #15	ENSCAFG00020025969 #15	ENSCAFG00020025966	KIFBP (ENSCAFG00020025960) #16	SRGN (ENSCAFG00020025951) #17	ENSCAFG00020025948 #18	SUPV3L1 (ENSCAFG00020025942) #19	HKDC1 (ENSCAFG00020025941) #21	HK1 (ENSCAFG00020025937) #22	TACR2 (ENSCAFG00020025934) #23	TSPAN15 (ENSCAFG00020025929) #25	NEUROG3 (ENSCAFG00020025927)	FAM241B (ENSCAFG00020025925) #26	ENSCAFG00020025917 #28	MACROH2A2 (ENSCAFG00020025914) #29	AIFM2 (ENSCAFG00020025909) #30	TYSND1 (ENSCAFG00020025903) #31	SAR1A (ENSCAFG00020025897) #32	ENSCAFG00020025888 #34	NPFFR1 (ENSCAFG00020025884) #36	LRRC20 (ENSCAFG00020025878) #37	EIF4EBP2 (ENSCAFG00020025874)	NODAL (ENSCAFG00020025872)	PALD1 (ENSCAFG00020025865)
Red fox	MODERN SPECIES	2	RUFY2 (ENSVVUG00000020153) #7	DNA2 (ENSVVUG00000020201) #8	SLC25A16 (ENSVVUG00000020295) #9	TET1 (ENSVVUG00000020304) #10	CCAR1 (ENSVVUG00000020327) #11	ENSVVUG00000020354	STOX1 (ENSVVUG00000020358) #12	ENSVVUG00000020360	DDX50 (ENSVVUG00000020366) ##14	DDX21 (ENSVVUG00000020486) #15	KIFBP (ENSVVUG00000020491) #16	SRGN (ENSVVUG00000020501) #17	VPS26A (ENSVVUG00000020502) #18	SUPV3L1 (ENSVVUG00000020506) #19	HKDC1 (ENSVVUG00000020578) #21	HK1 (ENSVVUG00000021583) #22	TACR2 (ENSVVUG00000021585) #23	TSPAN15 (ENSVVUG00000021590) #25	NEUROG3 (ENSVVUG00000021592)	FAM241B (ENSVVUG00000021593) #26	MACROH2A2 (ENSVVUG00000021605) #29	AIFM2 (ENSVVUG00000021607) #30	ENSVVUG00000021608 #31	SAR1A (ENSVVUG00000021609) #32	PPA1 (ENSVVUG00000021611) #34	ENSVVUG00000021614 #36	LRRC20 (ENSVVUG00000021615) #37	EIF4EBP2 (ENSVVUG00000021616)	NODAL (ENSVVUG00000021617)	PALD1 (ENSVVUG00000021621)	PRF1 (ENSVVUG00000021630)
Felidae	ANCESTRAL SPECIES	14	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a.b	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00940000171109	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Panthera	ANCESTRAL SPECIES	8	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a.b	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00940000171109	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Tiger	MODERN SPECIES	507	PBLD (ENSPTIG00000012140)	HNRNPH3 (ENSPTIG00000011896)	RUFY2 (ENSPTIG00000011514) #7	DNA2 (ENSPTIG00000010858) #8	SLC25A16 (ENSPTIG00000010618) #9	TET1 (ENSPTIG00000010239) #10	CCAR1 (ENSPTIG00000009648) #11	STOX1 (ENSPTIG00000009152) #12	DDX50 (ENSPTIG00000008454) ##14	DDX21 (ENSPTIG00000007268) #15	KIFBP (ENSPTIG00000006677) #16	SRGN (ENSPTIG00000006384) #17	VPS26A (ENSPTIG00000005610) #18	SUPV3L1 (ENSPTIG00000004317) #19	HKDC1 (ENSPTIG00000003776) #21	HK1 (ENSPTIG00000019734) #22	TACR2 (ENSPTIG00000019294) #23	TSPAN15 (ENSPTIG00000019089) #25	FAM241B (ENSPTIG00000018790) #26	ENSPTIG00000016717	MACROH2A2 (ENSPTIG00000016189) #29	AIFM2 (ENSPTIG00000016075) #30	SAR1A (ENSPTIG00000015795) #32	PPA1 (ENSPTIG00000015554) #34	NPFFR1 (ENSPTIG00000015327) #36	LRRC20 (ENSPTIG00000014791) #37	EIF4EBP2 (ENSPTIG00000014411)	NODAL (ENSPTIG00000014186)	PALD1 (ENSPTIG00000013878)	PRF1 (ENSPTIG00000012939)	ADAMTS14 (ENSPTIG00000011892)
Panthera_a	ANCESTRAL SPECIES	9	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00540000070023.c.b.a.a.a.a.b	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00940000171109	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
leopard	MODERN SPECIES	11	RUFY2 (ENSPPRG00000003327) #7	DNA2 (ENSPPRG00000001961) #8	SLC25A16 (ENSPPRG00000000167) #9	TET1 (ENSPPRG00000022855) #10	CCAR1 (ENSPPRG00000022293) #11	ENSPPRG00000016796 #12	DDX50 (ENSPPRG00000015826) ##14	DDX21 (ENSPPRG00000012523) #15	KIFBP (ENSPPRG00000009613) #16	ENSPPRG00000007964	SRGN (ENSPPRG00000007180) #17	ENSPPRG00000006564	VPS26A (ENSPPRG00000005935) #18	SUPV3L1 (ENSPPRG00000004832) #19	HKDC1 (ENSPPRG00000004371) #21	HK1 (ENSPPRG00000003231) #22	ENSPPRG00000001302	TACR2 (ENSPPRG00000000771) #23	TSPAN15 (ENSPPRG00000022614) #25	NEUROG3 (ENSPPRG00000017578)	FAM241B (ENSPPRG00000022953) #26	COL13A1 (ENSPPRG00000023812) #28	MACROH2A2 (ENSPPRG00000000078) #29	ENSPPRG00000022824 #30	ENSPPRG00000023345 #30	TYSND1 (ENSPPRG00000023547) #31	ENSPPRG00000023919 #32	ENSPPRG00000024192	PPA1 (ENSPPRG00000024279) #34	NPFFR1 (ENSPPRG00000024413) #36	LRRC20 (ENSPPRG00000021202) #37
lion	MODERN SPECIES	11	RUFY2 (ENSPLOG00000018096) #7	DNA2 (ENSPLOG00000017976) #8	SLC25A16 (ENSPLOG00000017896) #9	TET1 (ENSPLOG00000017809) #10	CCAR1 (ENSPLOG00000017678) #11	STOX1 (ENSPLOG00000017642) #12	DDX50 (ENSPLOG00000017600) ##14	DDX21 (ENSPLOG00000017462) #15	ENSPLOG00000017429	KIFBP (ENSPLOG00000017390) #16	SRGN (ENSPLOG00000017359) #17	VPS26A (ENSPLOG00000017289) #18	SUPV3L1 (ENSPLOG00000017224) #19	HKDC1 (ENSPLOG00000017088) #21	ENSPLOG00000017025	HK1 (ENSPLOG00000016810) #22	TACR2 (ENSPLOG00000016621) #23	TSPAN15 (ENSPLOG00000016551) #25	NEUROG3 (ENSPLOG00000016530)	FAM241B (ENSPLOG00000016503) #26	COL13A1 (ENSPLOG00000012846) #28	MACROH2A2 (ENSPLOG00000012212) #29	AIFM2 (ENSPLOG00000012065) #30	TYSND1 (ENSPLOG00000012029) #31	SAR1A (ENSPLOG00000011980) #32	PPA1 (ENSPLOG00000011917) #34	NPFFR1 (ENSPLOG00000011854) #36	LRRC20 (ENSPLOG00000011760) #37	EIF4EBP2 (ENSPLOG00000011707)	NODAL (ENSPLOG00000011665)	PALD1 (ENSPLOG00000011522)
Cat	MODERN SPECIES	242	RUFY2 (ENSFCAG00000022186) #7	DNA2 (ENSFCAG00000010848) #8	SLC25A16 (ENSFCAG00000010850) #9	TET1 (ENSFCAG00000012673) #10	CCAR1 (ENSFCAG00000012676) #11	STOX1 (ENSFCAG00000043562) #12	DDX50 (ENSFCAG00000012678) ##14	DDX21 (ENSFCAG00000002109) #15	KIFBP (ENSFCAG00000027361) #16	ENSFCAG00000004706	SRGN (ENSFCAG00000032249) #17	VPS26A (ENSFCAG00000031306) #18	SUPV3L1 (ENSFCAG00000004921) #19	HKDC1 (ENSFCAG00000044279) #21	ENSFCAG00000039541	HK1 (ENSFCAG00000004927) #22	TACR2 (ENSFCAG00000004928) #23	TSPAN15 (ENSFCAG00000004929) #25	NEUROG3 (ENSFCAG00000022498)	FAM241B (ENSFCAG00000025651) #26	COL13A1 (ENSFCAG00000041886) #28	MACROH2A2 (ENSFCAG00000001225) #29	AIFM2 (ENSFCAG00000001226) #30	TYSND1 (ENSFCAG00000044166) #31	SAR1A (ENSFCAG00000043085) #32	PPA1 (ENSFCAG00000028251) #34	LRRC20 (ENSFCAG00000001228) #36	EIF4EBP2 (ENSFCAG00000036699)	NODAL (ENSFCAG00000001230)	PALD1 (ENSFCAG00000001231)	PRF1 (ENSFCAG00000028455)
Laurasiatheria_c	ANCESTRAL SPECIES	15	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00950000183755	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Equus	ANCESTRAL SPECIES	9	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00950000183755	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.g #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Donkey	MODERN SPECIES	11	SLC25A16 (ENSEASG00005015456) #9	TET1 (ENSEASG00005015457) #10	ENSEASG00005025471	CCAR1 (ENSEASG00005015474) #11	STOX1 (ENSEASG00005015592) #12	ENSEASG00005031915	DDX50 (ENSEASG00005015595) ##14	DDX21 (ENSEASG00005015598) #15	ENSEASG00005027568	KIFBP (ENSEASG00005015600) #16	ENSEASG00005015604	SRGN (ENSEASG00005024600) #17	VPS26A (ENSEASG00005015606) #18	SUPV3L1 (ENSEASG00005015607) #19	HKDC1 (ENSEASG00005015681) #21	HK1 (ENSEASG00005016022) #22	TACR2 (ENSEASG00005016028) #23	TSPAN15 (ENSEASG00005016032) #25	FAM241B (ENSEASG00005016035) #26	NEUROG3 (ENSEASG00005016033)	COL13A1 (ENSEASG00005028356) #28	MACROH2A2 (ENSEASG00005016040) #29	AIFM2 (ENSEASG00005016041) #30	TYSND1 (ENSEASG00005016043) #31	SAR1A (ENSEASG00005028734) #32	PPA1 (ENSEASG00005016049) #34	NPFFR1 (ENSEASG00005016050) #36	LRRC20 (ENSEASG00005016051) #37	EIF4EBP2 (ENSEASG00005016053)	NODAL (ENSEASG00005016055)	PALD1 (ENSEASG00005016057)
Horse	MODERN SPECIES		DNA2 (ENSECAG00000022137) #8	ENSECAG00000052048	SLC25A16 (ENSECAG00000010181) #9	TET1 (ENSECAG00000015450) #10	CCAR1 (ENSECAG00000016291) #11	STOX1 (ENSECAG00000022300) #12	DDX50 (ENSECAG00000023044) ##14	DDX21 (ENSECAG00000010810) #15	ENSECAG00000043988	KIFBP (ENSECAG00000000471) #16	ENSECAG00000008345	SRGN (ENSECAG00000009192) #17	ENSECAG00000009507 #18	SUPV3L1 (ENSECAG00000016297) #19	HKDC1 (ENSECAG00000004335) #21	HK1 (ENSECAG00000010479) #22	TACR2 (ENSECAG00000008609) #23	TSPAN15 (ENSECAG00000013543) #25	NEUROG3 (ENSECAG00000017888)	FAM241B (ENSECAG00000018112) #26	COL13A1 (ENSECAG00000018359) #28	MACROH2A2 (ENSECAG00000019223) #29	AIFM2 (ENSECAG00000004338) #30	TYSND1 (ENSECAG00000009202) #31	SAR1A (ENSECAG00000009730) #32	ENSECAG00000059469	ENSECAG00000047322	ENSECAG00000051984	PPA1 (ENSECAG00000018686) #34	NPFFR1 (ENSECAG00000010498) #36	LRRC20 (ENSECAG00000015466) #37
Chiroptera	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Megabat	MODERN SPECIES	1978								STOX1 (ENSPVAG00000009518) #12	DDX50 (ENSPVAG00000009519) ##14	DDX21 (ENSPVAG00000009521) #15	KIFBP (ENSPVAG00000009527) #16	SRGN (ENSPVAG00000009530) #17	VPS26A (ENSPVAG00000009532) #18	SUPV3L1 (ENSPVAG00000009536) #19	HKDC1 (ENSPVAG00000009538) #21	HK1 (ENSPVAG00000009542) #22	TACR2 (ENSPVAG00000009548) #23
Microchiroptera	ANCESTRAL SPECIES	5	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901.b ##14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Microbat	MODERN SPECIES	1229																HK1 (ENSMLUG00000012697) #22	TACR2 (ENSMLUG00000012713) #23	TSPAN15 (ENSMLUG00000016251) #25	NEUROG3 (ENSMLUG00000024120)	COL13A1 (ENSMLUG00000002593) #28	MACROH2A2 (ENSMLUG00000006600) #29	AIFM2 (ENSMLUG00000006612) #30	TYSND1 (ENSMLUG00000024592) #31	SAR1A (ENSMLUG00000006626) #32	PPA1 (ENSMLUG00000017790) #34	ENSMLUG00000002922	ENSMLUG00000015290 #37	EIF4EBP2 (ENSMLUG00000015295)	NODAL (ENSMLUG00000015297)	PALD1 (ENSMLUG00000002728)	PRF1 (ENSMLUG00000008949)
Greater horseshoe bat	MODERN SPECIES	7	PBLD (ENSRFEG00010007374)	ENSRFEG00010007440	RUFY2 (ENSRFEG00010007641) #7	DNA2 (ENSRFEG00010007932) #8	SLC25A16 (ENSRFEG00010008266) #9	TET1 (ENSRFEG00010008308) #10	ENSRFEG00010008346	CCAR1 (ENSRFEG00010008394) #11	STOX1 (ENSRFEG00010008521) #12	ENSRFEG00010008658 #15	KIFBP (ENSRFEG00010008895) #16	SRGN (ENSRFEG00010008952) #17	ENSRFEG00010008991 #18	SUPV3L1 (ENSRFEG00010009111) #19	HKDC1 (ENSRFEG00010009303) #21	HK1 (ENSRFEG00010009380) #22	TACR2 (ENSRFEG00010009489) #23	TSPAN15 (ENSRFEG00010009559) #25	NEUROG3 (ENSRFEG00010009646)	FAM241B (ENSRFEG00010009658) #26	COL13A1 (ENSRFEG00010009761) #28	MACROH2A2 (ENSRFEG00010010000) #29	AIFM2 (ENSRFEG00010010027) #30	TYSND1 (ENSRFEG00010010070) #31	SAR1A (ENSRFEG00010010102) #32	PPA1 (ENSRFEG00010010149) #34	ENSRFEG00010010193	NPFFR1 (ENSRFEG00010010307) #36	EIF4EBP2 (ENSRFEG00010010536)	NODAL (ENSRFEG00010010575)	PALD1 (ENSRFEG00010010635)
Eulipotyphla	ANCESTRAL SPECIES	1407																ENSGT00950000182787.A #22	ENSGT00940000155512 #23
Hedgehog	MODERN SPECIES	5063																HK1 (ENSEEUG00000009836) #22	ENSEEUG00000009923 #23
Common shrew	MODERN SPECIES	3908																ENSSARG00000008893 #22
Atlantogenata	ANCESTRAL SPECIES	10	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Xenarthra	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448	ENSGT00530000063725
Sloth	MODERN SPECIES	4531																HK1 (ENSCHOG00000002690) #22
Armadillo	MODERN SPECIES	2761	HNRNPH3 (ENSDNOG00000004881)	RUFY2 (ENSDNOG00000000196) #7	ENSDNOG00000035529	DNA2 (ENSDNOG00000007324) #8	SLC25A16 (ENSDNOG00000008892) #9	TET1 (ENSDNOG00000018763) #10	CCAR1 (ENSDNOG00000007499) #11	STOX1 (ENSDNOG00000035931) #12	DDX50 (ENSDNOG00000001675) #14	DDX21 (ENSDNOG00000001680) #15	KIFBP (ENSDNOG00000030736) #16	SRGN (ENSDNOG00000043179) #17	VPS26A (ENSDNOG00000044691) #18	SUPV3L1 (ENSDNOG00000004855) #19	HKDC1 (ENSDNOG00000044474) #21	HK1 (ENSDNOG00000014342) #22	TACR2 (ENSDNOG00000014359) #23	TSPAN15 (ENSDNOG00000011926) #25	ENSDNOG00000040959	FAM241B (ENSDNOG00000014713) #26	COL13A1 (ENSDNOG00000013984) #28	MACROH2A2 (ENSDNOG00000011036) #29	AIFM2 (ENSDNOG00000011059) #30	TYSND1 (ENSDNOG00000047164) #31	ENSDNOG00000035765 #32	PPA1 (ENSDNOG00000047169) #34	NPFFR1 (ENSDNOG00000014877) #36	LRRC20 (ENSDNOG00000041213) #37	EIF4EBP2 (ENSDNOG00000010090)	NODAL (ENSDNOG00000017851)	PALD1 (ENSDNOG00000044335)
Afrotheria	ANCESTRAL SPECIES	4	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Afrotheria_a	ANCESTRAL SPECIES	4	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Elephant	MODERN SPECIES	3	HNRNPH3 (ENSLAFG00000012955)	RUFY2 (ENSLAFG00000012964) #7	DNA2 (ENSLAFG00000012975) #8	SLC25A16 (ENSLAFG00000006168) #9	TET1 (ENSLAFG00000006171) #10	CCAR1 (ENSLAFG00000006177) #11	ENSLAFG00000029642 #12	ENSLAFG00000006184 #12	DDX50 (ENSLAFG00000006186) #14	DDX21 (ENSLAFG00000007962) #15	KIFBP (ENSLAFG00000005801) #16	ENSLAFG00000004256 #17	VPS26A (ENSLAFG00000000888) #18	SUPV3L1 (ENSLAFG00000000889) #19	HKDC1 (ENSLAFG00000000891) #21	HK1 (ENSLAFG00000017950) #22	TACR2 (ENSLAFG00000017960) #23	TSPAN15 (ENSLAFG00000016822) #25	NEUROG3 (ENSLAFG00000028187)	FAM241B (ENSLAFG00000030222) #26	COL13A1 (ENSLAFG00000015605) #28	MACROH2A2 (ENSLAFG00000015625) #29	AIFM2 (ENSLAFG00000015633) #30	TYSND1 (ENSLAFG00000027644) #31	SAR1A (ENSLAFG00000004046) #32	PPA1 (ENSLAFG00000004048) #34	NPFFR1 (ENSLAFG00000004049) #36	LRRC20 (ENSLAFG00000004053) #37	EIF4EBP2 (ENSLAFG00000006809)	NODAL (ENSLAFG00000021867)	ENSLAFG00000032012
Hyrax	MODERN SPECIES	4152																HK1 (ENSPCAG00000000273) #22	TACR2 (ENSPCAG00000000295) #23
Tenrec	MODERN SPECIES	4888																HK1 (ENSETEG00000017796) #22	TACR2 (ENSETEG00000017801) #23
Marsupialia	ANCESTRAL SPECIES		ENSGT00530000063723.b.h	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276 #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Marsupialia_b	ANCESTRAL SPECIES		ENSGT00530000063723.b.h	ENSGT00940000157720	ENSGT00940000155595.g #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.`b.b #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Diprotodontia	ANCESTRAL SPECIES	48	ENSGT00390000017595	ENSGT00530000063723.b.h	ENSGT00940000157720	ENSGT00940000155595.g #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.`b.b #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223	ENSGT00390000005448
Diprotodontia_a	ANCESTRAL SPECIES	42	ENSGT00390000017595	ENSGT00530000063723.b.h	ENSGT00940000157720	ENSGT00940000155595.g #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155901 #14	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973.g #25	ENSGT00940000157973.h #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00390000014627 #31	ENSGT00940000155276.`b.b #32	ENSGT00390000017004.a.b #34	ENSGT01070000253744.b.a.b #36	ENSGT00730000111199 #37	ENSGT00940000155342	ENSGT00940000160223
koala	MODERN SPECIES	267			ENSPCIG00000009862 #7	DNA2 (ENSPCIG00000033559) #8	SLC25A16 (ENSPCIG00000030644) #9	ENSPCIG00000013245 #10	CCAR1 (ENSPCIG00000016044) #11	STOX1 (ENSPCIG00000016042) #12	DDX50 (ENSPCIG00000016036) #14	DDX21 (ENSPCIG00000015505) #15	ENSPCIG00000015455 #16	ENSPCIG00000015452	VPS26A (ENSPCIG00000015448) #18	SUPV3L1 (ENSPCIG00000015440) #19	HKDC1 (ENSPCIG00000015433) #21	HK1 (ENSPCIG00000015422) #22	TACR2 (ENSPCIG00000015405) #23	TSPAN15 (ENSPCIG00000015396) #25	NEUROG3 (ENSPCIG00000003234)	FAM241B (ENSPCIG00000031997) #26	MACROH2A2 (ENSPCIG00000015324) #29	AIFM2 (ENSPCIG00000015321) #30	TYSND1 (ENSPCIG00000015317) #31	ENSPCIG00000015309 #32	PPA1 (ENSPCIG00000015299) #34	NPFFR1 (ENSPCIG00000037358) #36	LRRC20 (ENSPCIG00000015284) #37	EIF4EBP2 (ENSPCIG00000015273)	NODAL (ENSPCIG00000015277)	PALD1 (ENSPCIG00000015266)	PRF1 (ENSPCIG00000015263)
Common wonbat	MODERN SPECIES	1075	PBLD (ENSVURG00010015388)	ENSVURG00010015380	HNRNPH3 (ENSVURG00010015375)	RUFY2 (ENSVURG00010015342) #7	DNA2 (ENSVURG00010015307) #8	SLC25A16 (ENSVURG00010015289) #9	ENSVURG00010015267 #10	CCAR1 (ENSVURG00010015227) #11	ENSVURG00010015218 #12	DDX50 (ENSVURG00010015191) #14	DDX21 (ENSVURG00010014607) #15	KIFBP (ENSVURG00010014531) #16	VPS26A (ENSVURG00010014507) #18	SUPV3L1 (ENSVURG00010014493) #19	HKDC1 (ENSVURG00010014476) #21	HK1 (ENSVURG00010014455) #22	TACR2 (ENSVURG00010014437) #23	ENSVURG00010014421 #25	NEUROG3 (ENSVURG00010014408)	FAM241B (ENSVURG00010014398) #26	COL13A1 (ENSVURG00010014283) #28	MACROH2A2 (ENSVURG00010014256) #29	AIFM2 (ENSVURG00010014241) #30	TYSND1 (ENSVURG00010014223) #31	ENSVURG00010014209 #32	ENSVURG00010014198 #34	NPFFR1 (ENSVURG00010014188) #36	LRRC20 (ENSVURG00010014173) #37	EIF4EBP2 (ENSVURG00010014166)	NODAL (ENSVURG00010014159)	PALD1 (ENSVURG00010014125)
Wallaby	MODERN SPECIES	6184																HK1 (ENSMEUG00000013508) #22
Tasmanian devil	MODERN SPECIES	1	ENSSHAG00000025918	HNRNPH3 (ENSSHAG00000010909)	RUFY2 (ENSSHAG00000010657) #7	SLC25A16 (ENSSHAG00000010124) #9	DNA2 (ENSSHAG00000010386) #8	ENSSHAG00000021111 #10	CCAR1 (ENSSHAG00000007504) #11	STOX1 (ENSSHAG00000006272) #12	DDX50 (ENSSHAG00000005690) #14	DDX21 (ENSSHAG00000005334) #15	KIFBP (ENSSHAG00000005023) #16	ENSSHAG00000028784 #17	VPS26A (ENSSHAG00000002548) #18	SUPV3L1 (ENSSHAG00000000910) #19	HKDC1 (ENSSHAG00000025184) #21	HK1 (ENSSHAG00000004335) #22	TSPAN15 (ENSSHAG00000001204) #25	NEUROG3 (ENSSHAG00000002586)	FAM241B (ENSSHAG00000027672) #26	COL13A1 (ENSSHAG00000004917) #28	MACROH2A2 (ENSSHAG00000007934) #29	AIFM2 (ENSSHAG00000008296) #30	TYSND1 (ENSSHAG00000024975) #31	SAR1A (ENSSHAG00000008596) #32	PPA1 (ENSSHAG00000008870) #34	ENSSHAG00000009270 #37	NODAL (ENSSHAG00000010040)	PALD1 (ENSSHAG00000010283)	PRF1 (ENSSHAG00000010858)	ADAMTS14 (ENSSHAG00000002878)	ENSSHAG00000004725
Opossum	MODERN SPECIES	338							ENSMODG00000010747 #12	DDX50 (ENSMODG00000010741) #14	DDX21 (ENSMODG00000010727) #15	KIF1BP (ENSMODG00000049071) #16	ENSMODG00000048569 #17	VPS26A (ENSMODG00000010661) #18	SUPV3L1 (ENSMODG00000010700) #19	ENSMODG00000046903	HKDC1 (ENSMODG00000010681) #21	HK1 (ENSMODG00000010645) #22
Platypus	MODERN SPECIES	14	CCDC152 (ENSOANG00000029600)	ENSOANG00000040638	ATOH7 (ENSOANG00000047393)	PBLD (ENSOANG00000039180)	HNRNPH3 (ENSOANG00000002260)	RUFY2 (ENSOANG00000031677) #7	DNA2 (ENSOANG00000015051) #8	SLC25A16 (ENSOANG00000015050) #9	ENSOANG00000015049 #10	CCAR1 (ENSOANG00000015048) #11	KIFBP (ENSOANG00000004778) #16	ENSOANG00000038566 #17	VPS26A (ENSOANG00000004188) #18	SUPV3L1 (ENSOANG00000008886) #19	HKDC1 (ENSOANG00000045409) #21	HK1 (ENSOANG00000008888) #22	TACR2 (ENSOANG00000008889) #23	TSPAN15 (ENSOANG00000038840) #25	ENSOANG00000047301	ENSOANG00000000835	COL13A1 (ENSOANG00000031524) #28	AIFM2 (ENSOANG00000012147) #30	ENSOANG00000036780 #31	SAR1A (ENSOANG00000037626) #32	MACROH2A2 (ENSOANG00000044304) #29	ENSOANG00000012149 #34	NPFFR1 (ENSOANG00000043807) #36	LRRC20 (ENSOANG00000039409) #37	EIF4EBP2 (ENSOANG00000041057)	ENSOANG00000044417	PALD1 (ENSOANG00000011806)
Sauria	ANCESTRAL SPECIES	8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000162658.b	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT01000000215701	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000155245
Archelosauria	ANCESTRAL SPECIES	10	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.j.a #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT01000000215701	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000155245	ENSGT00940000163256
Archosauria	ANCESTRAL SPECIES	7	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.j.a #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000170705	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b
Aves	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b
Neognathae	ANCESTRAL SPECIES	7	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b
Galloanserae	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b	ENSGT00390000000046
Phasianidae	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b	ENSGT00390000000046
Japanese quail	MODERN SPECIES	24	PBLD (ENSCJPG00005001759)	HNRNPH3 (ENSCJPG00005001763)	RUFY2 (ENSCJPG00005001774) #7	DNA2 (ENSCJPG00005002203) #8	SLC25A16 (ENSCJPG00005002240) #9	ENSCJPG00005002241 #10	CCAR1 (ENSCJPG00005002243) #11	STOX1 (ENSCJPG00005002696) #12	DDX21 (ENSCJPG00005002708) #15	ENSCJPG00005003427 #15	KIFBP (ENSCJPG00005003428) #16	SRGN (ENSCJPG00005003429) #17	VPS26A (ENSCJPG00005003430) #18	SUPV3L1 (ENSCJPG00005003431) #19	HKDC1 (ENSCJPG00005003448) #21	HK1 (ENSCJPG00005006707) #22	TACR2 (ENSCJPG00005006716) #23	TSPAN15 (ENSCJPG00005006720) #25	NEUROG3 (ENSCJPG00005006722)	MACROH2A2 (ENSCJPG00005006727) #29	AIFM2 (ENSCJPG00005006730) #30	CHST3 (ENSCJPG00005006732)	ENSCJPG00005006736	ENSCJPG00005006737	ENSCJPG00005006740	CDH23 (ENSCJPG00005006766)	ENSCJPG00005007738	SLC29A3 (ENSCJPG00005007739)	UNC5B (ENSCJPG00005007749)	PCBD1 (ENSCJPG00005008970)	SGPL1 (ENSCJPG00005008971)
Phasianidae_b	ANCESTRAL SPECIES	6	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b	ENSGT00390000000046
Chicken	MODERN SPECIES	35	PBLD (ENSGALG00010022956)	HNRNPH3 (ENSGALG00010022981)	RUFY2 (ENSGALG00010023050) #7	DNA2 (ENSGALG00010023065) #8	SLC25A16 (ENSGALG00010023079) #9	TET1 (ENSGALG00010023108) #10	CCAR1 (ENSGALG00010023140) #11	STOX1 (ENSGALG00010023157) #12	DDX21 (ENSGALG00010023160) #15	ENSGALG00010023171 #15	KIF1BP (ENSGALG00010023188) #16	VPS26A (ENSGALG00010023200) #18	SRGN (ENSGALG00010023204) #17	SUPV3L1 (ENSGALG00010023214) #19	HKDC1 (ENSGALG00010023229) #21	HK1 (ENSGALG00010023243) #22	TACR2 (ENSGALG00010023253) #23	TSPAN15 (ENSGALG00010023259) #25	NEUROG3 (ENSGALG00010020528)	COL13A1 (ENSGALG00010020379) #28	NUDT13 (ENSGALG00010021269)	P4HA1 (ENSGALG00010021302)	PLA2G12B (ENSGALG00010021316)	OIT3 (ENSGALG00010021332)	MCU (ENSGALG00010021411)	MICU1 (ENSGALG00010021481)	DNAJB12 (ENSGALG00010021502)	DDIT4 (ENSGALG00010021509)	ANAPC16 (ENSGALG00010021549)	ASCC1 (ENSGALG00010021645)	SPOCK2 (ENSGALG00010021659)
Turkey	MODERN SPECIES	28	MYPN (ENSMGAG00000003858)	PBLD (ENSMGAG00000003814)	HNRNPH3 (ENSMGAG00000003795)	RUFY2 (ENSMGAG00000016903) #7	DNA2 (ENSMGAG00000004097) #8	SLC25A16 (ENSMGAG00000004150) #9	ENSMGAG00000004157 #10	ENSMGAG00000019186 #10	CCAR1 (ENSMGAG00000004166) #11	STOX1 (ENSMGAG00000004248) #12	DDX21 (ENSMGAG00000004298) #15	SRGN (ENSMGAG00000018423) #17	VPS26A (ENSMGAG00000004241) #18	SUPV3L1 (ENSMGAG00000004251) #19	HKDC1 (ENSMGAG00000018992) #21	HK1 (ENSMGAG00000004281) #22	TACR2 (ENSMGAG00000004484) #23	TSPAN15 (ENSMGAG00000004607) #25	COL13A1 (ENSMGAG00000004506) #28	MACROH2A2 (ENSMGAG00000005204) #29	AIFM2 (ENSMGAG00000004636) #30	CHST3 (ENSMGAG00000004651)	ENSMGAG00000004666	ENSMGAG00000021481	CDH23 (ENSMGAG00000004798)	ENSMGAG00000004998	ENSMGAG00000018683	SLC29A3 (ENSMGAG00000005024)	UNC5B (ENSMGAG00000005032)	ENSMGAG00000021615	SGPL1 (ENSMGAG00000005166)
Anatidae	ANCESTRAL SPECIES	4	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b.c	ENSGT00940000163256	ENSGT00940000163216	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b	ENSGT00390000000046	ENSGT00940000158426
Duck	MODERN SPECIES	24	RUFY2 (ENSAPLG00000015834) #7	DNA2 (ENSAPLG00000015576) #8	ENSAPLG00000017222	SLC25A16 (ENSAPLG00000015185) #9	TET1 (ENSAPLG00000024977) #10	ENSAPLG00000013870 #11	ENSAPLG00000022191 #11	STOX1 (ENSAPLG00000013865) #12	DDX21 (ENSAPLG00000013022) #15	ENSAPLG00000013000 #15	KIFBP (ENSAPLG00000012980) #16	SRGN (ENSAPLG00000026405) #17	VPS26A (ENSAPLG00000012577) #18	SUPV3L1 (ENSAPLG00000012258) #19	HKDC1 (ENSAPLG00000011408) #21	HK1 (ENSAPLG00000009913) #22	TACR2 (ENSAPLG00000013012) #23	TSPAN15 (ENSAPLG00000012804) #25	COL13A1 (ENSAPLG00000012044) #28	AIFM2 (ENSAPLG00000029564) #30	MACROH2A2 (ENSAPLG00000011576) #29	ENSAPLG00000028226	CHST3 (ENSAPLG00000019849)	ENSAPLG00000021054	ENSAPLG00000022662	VSIR (ENSAPLG00000022193)	CDH23 (ENSAPLG00000008813)	ENSAPLG00000017191	SGPL1 (ENSAPLG00000003637)	PCBD1 (ENSAPLG00000021420)	ENSAPLG00000004184
Neognathae_b	ANCESTRAL SPECIES	8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b
Neognathae_c	ANCESTRAL SPECIES	8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b	ENSGT00390000000046	ENSGT00940000165645
Golden eagle	MODERN SPECIES	2	PBLD (ENSACCG00020002719)	HNRNPH3 (ENSACCG00020002701)	RUFY2 (ENSACCG00020002686) #7	DNA2 (ENSACCG00020002580) #8	SLC25A16 (ENSACCG00020002415) #9	ENSACCG00020002402 #10	CCAR1 (ENSACCG00020002360) #11	STOX1 (ENSACCG00020002281) #12	DDX21 (ENSACCG00020002259) #15	ENSACCG00020002236 #15	KIFBP (ENSACCG00020002201) #16	SRGN (ENSACCG00020002183) #17	VPS26A (ENSACCG00020002166) #18	SUPV3L1 (ENSACCG00020002147) #19	HKDC1 (ENSACCG00020002119) #21	HK1 (ENSACCG00020002100) #22	TACR2 (ENSACCG00020002078) #23	TSPAN15 (ENSACCG00020002060) #25	MACROH2A2 (ENSACCG00020002041) #29	AIFM2 (ENSACCG00020002014) #30	CHST3 (ENSACCG00020002000)	ENSACCG00020001966	ENSACCG00020001935	ENSACCG00020001911	C10orf105 (ENSACCG00020001899)	CDH23 (ENSACCG00020001571)	SLC29A3 (ENSACCG00020001335)	UNC5B (ENSACCG00020001173)	PCBD1 (ENSACCG00020001074)	SGPL1 (ENSACCG00020001054)	ENSACCG00020001031
Kakapo	MODERN SPECIES	22	HNRNPH3 (ENSSHBG00005010407)	RUFY2 (ENSSHBG00005010445) #7	DNA2 (ENSSHBG00005010489) #8	SLC25A16 (ENSSHBG00005010545) #9	TET1 (ENSSHBG00005010617) #10	ENSSHBG00005010750 #11	ENSSHBG00005010785 #11	STOX1 (ENSSHBG00005010818) #12	DDX21 (ENSSHBG00005010848) #15	ENSSHBG00005010898 #15	KIFBP (ENSSHBG00005010939) #16	SRGN (ENSSHBG00005010984) #17	VPS26A (ENSSHBG00005011020) #18	SUPV3L1 (ENSSHBG00005011052) #19	HKDC1 (ENSSHBG00005011139) #21	HK1 (ENSSHBG00005011180) #22	TACR2 (ENSSHBG00005011223) #23	TSPAN15 (ENSSHBG00005011254) #25	MACROH2A2 (ENSSHBG00005011283) #29	CHST3 (ENSSHBG00005011330)	ENSSHBG00005011380	ENSSHBG00005011421	CDH23 (ENSSHBG00005011646)	ENSSHBG00005012023	C10orf105 (ENSSHBG00005012045)	SLC29A3 (ENSSHBG00005012056)	UNC5B (ENSSHBG00005012131)	PCBD1 (ENSSHBG00005012245)	SGPL1 (ENSSHBG00005012274)	ENSSHBG00005012299	ENSSHBG00005012331
Passeriformes	ANCESTRAL SPECIES	35	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Passeriformes_d	ANCESTRAL SPECIES	7	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Passeriformes_g	ANCESTRAL SPECIES	8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Passeroidea	ANCESTRAL SPECIES	7	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.i #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000163216	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Zebra finch	MODERN SPECIES	28	HNRNPH3 (ENSTGUG00000003609)	RUFY2 (ENSTGUG00000003642) #7	DNA2 (ENSTGUG00000003702) #8	SLC25A16 (ENSTGUG00000003731) #9	TET1 (ENSTGUG00000027320) #10	ENSTGUG00000003765 #11	ENSTGUG00000022222 #11	STOX1 (ENSTGUG00000025603) #12	DDX21 (ENSTGUG00000003810) #15	ENSTGUG00000003865 #15	KIFBP (ENSTGUG00000003868) #16	SRGN (ENSTGUG00000003885) #17	SUPV3L1 (ENSTGUG00000003907) #19	VPS26A (ENSTGUG00000003886) #18	HKDC1 (ENSTGUG00000003932) #21	HK1 (ENSTGUG00000003945) #22	TACR2 (ENSTGUG00000004005) #23	TSPAN15 (ENSTGUG00000004009) #25	NEUROG3 (ENSTGUG00000004028)	MACROH2A2 (ENSTGUG00000004103) #29	AIFM2 (ENSTGUG00000004116) #30	CHST3 (ENSTGUG00000021089)	ENSTGUG00000004140	ENSTGUG00000004181	ENSTGUG00000004242	ENSTGUG00000026975	C10orf105 (ENSTGUG00000020210)	ENSTGUG00000004184	SLC29A3 (ENSTGUG00000004247)	UNC5B (ENSTGUG00000004265)	PCBD1 (ENSTGUG00000019266)
Common canary	MODERN SPECIES	71	LRRC20 (ENSSCAG00000016095) #37	ENSSCAG00000016097	PALD1 (ENSSCAG00000016099)	ADAMTS14 (ENSSCAG00000016114)	ENSSCAG00000016124	ENSSCAG00000016130	ENSSCAG00000016131	SGPL1 (ENSSCAG00000016136)	PCBD1 (ENSSCAG00000016143)	UNC5B (ENSSCAG00000016203)	KIFBP (ENSSCAG00000016348) #16	SRGN (ENSSCAG00000016352) #17	VPS26A (ENSSCAG00000016354) #18	SUPV3L1 (ENSSCAG00000016362) #19	HKDC1 (ENSSCAG00000016375) #21	HK1 (ENSSCAG00000016382) #22	TACR2 (ENSSCAG00000016387) #23	TSPAN15 (ENSSCAG00000016392) #25	NEUROG3 (ENSSCAG00000016396)	COL13A1 (ENSSCAG00000016404) #28	MACROH2A2 (ENSSCAG00000016417) #29	AIFM2 (ENSSCAG00000016423) #30	CHST3 (ENSSCAG00000016432)	ENSSCAG00000016433	ENSSCAG00000016434	CDH23 (ENSSCAG00000016495)	VSIR (ENSSCAG00000016548)	C10orf105 (ENSSCAG00000016549)	SLC29A3 (ENSSCAG00000016550)
Medium ground finch	MODERN SPECIES	218	ENSGFOG00000003992	ATOH7 (ENSGFOG00000003985)	PBLD (ENSGFOG00000003968)	HNRNPH3 (ENSGFOG00000003955)	RUFY2 (ENSGFOG00000003913) #7	DNA2 (ENSGFOG00000003748) #8	SLC25A16 (ENSGFOG00000003642) #9	TET1 (ENSGFOG00000003602) #10	CCAR1 (ENSGFOG00000003445) #11	STOX1 (ENSGFOG00000003325) #12	DDX21 (ENSGFOG00000002970) #15	ENSGFOG00000002723 #15	SRGN (ENSGFOG00000002515) #17	VPS26A (ENSGFOG00000002189) #18	SUPV3L1 (ENSGFOG00000014202) #19	HK1 (ENSGFOG00000014085) #22	TACR2 (ENSGFOG00000014047) #23	TSPAN15 (ENSGFOG00000014043) #25	MACROH2A2 (ENSGFOG00000014041) #29	AIFM2 (ENSGFOG00000014039) #30	ENSGFOG00000014023	ENSGFOG00000014014	VSIR (ENSGFOG00000014006)	C10orf105 (ENSGFOG00000014003)	CDH23 (ENSGFOG00000013983)
Flycatcher	MODERN SPECIES	25	RUFY2 (ENSFALG00000012957) #7	HNRNPH3 (ENSFALG00000012964)	DNA2 (ENSFALG00000012984) #8	TET1 (ENSFALG00000013006) #10	SLC25A16 (ENSFALG00000027117) #9	ENSFALG00000013015 #11	ENSFALG00000025729 #11	DDX21 (ENSFALG00000013022) #15	STOX1 (ENSFALG00000013019) #12	ENSFALG00000013043 #15	KIFBP (ENSFALG00000013053) #16	SRGN (ENSFALG00000023615) #17	VPS26A (ENSFALG00000013068) #18	SUPV3L1 (ENSFALG00000013094) #19	HKDC1 (ENSFALG00000013116) #21	HK1 (ENSFALG00000013137) #22	TACR2 (ENSFALG00000013142) #23	TSPAN15 (ENSFALG00000013147) #25	COL13A1 (ENSFALG00000013182) #28	MACROH2A2 (ENSFALG00000013212) #29	AIFM2 (ENSFALG00000013213) #30	CHST3 (ENSFALG00000026689)	ENSFALG00000013219	ENSFALG00000013221	CDH23 (ENSFALG00000013275)	ENSFALG00000013369	C10orf105 (ENSFALG00000029060)	SLC29A3 (ENSFALG00000013374)	UNC5B (ENSFALG00000013380)	ENSFALG00000012798	PCBD1 (ENSFALG00000025166)
Great tit	MODERN SPECIES	26	PBLD (ENSPMJG00000013968)	HNRNPH3 (ENSPMJG00000013969)	RUFY2 (ENSPMJG00000013970) #7	DNA2 (ENSPMJG00000013973) #8	SLC25A16 (ENSPMJG00000013974) #9	TET1 (ENSPMJG00000013999) #10	ENSPMJG00000014001 #11	ENSPMJG00000014006 #11	STOX1 (ENSPMJG00000014009) #12	DDX21 (ENSPMJG00000014010) #15	ENSPMJG00000014011 #15	SRGN (ENSPMJG00000014016) #17	VPS26A (ENSPMJG00000014021) #18	SUPV3L1 (ENSPMJG00000014025) #19	HKDC1 (ENSPMJG00000014078) #21	HK1 (ENSPMJG00000014079) #22	TACR2 (ENSPMJG00000014099) #23	TSPAN15 (ENSPMJG00000014101) #25	COL13A1 (ENSPMJG00000014110) #28	MACROH2A2 (ENSPMJG00000014112) #29	AIFM2 (ENSPMJG00000014113) #30	CHST3 (ENSPMJG00000014114)	ENSPMJG00000014115	ENSPMJG00000014138	ENSPMJG00000014139	CDH23 (ENSPMJG00000014163)	ENSPMJG00000015052	C10orf105 (ENSPMJG00000015053)	SLC29A3 (ENSPMJG00000015054)	UNC5B (ENSPMJG00000015066)	ENSPMJG00000015339
Australian saltwater crocodile	MODERN SPECIES	39	MYPN (ENSCPRG00005006182)	ATOH7 (ENSCPRG00005006200)	RUFY2 (ENSCPRG00005006212) #7	HNRNPH3 (ENSCPRG00005006263)	DNA2 (ENSCPRG00005006279) #8	SLC25A16 (ENSCPRG00005006303) #9	TET1 (ENSCPRG00005006312) #10	CCAR1 (ENSCPRG00005006326) #11	ENSCPRG00005006342 #15	ENSCPRG00005006387 #15	KIFBP (ENSCPRG00005006411) #16	SRGN (ENSCPRG00005006414) #17	VPS26A (ENSCPRG00005006422) #18	SUPV3L1 (ENSCPRG00005006427) #19	HKDC1 (ENSCPRG00005006452) #21	HK1 (ENSCPRG00005006675) #22	TACR2 (ENSCPRG00005006691) #23	TSPAN15 (ENSCPRG00005006695) #25	ENSCPRG00005006709	MACROH2A2 (ENSCPRG00005006718) #29	AIFM2 (ENSCPRG00005006719) #30	CHST3 (ENSCPRG00005006722)	ENSCPRG00005006728	ENSCPRG00005006739	ENSCPRG00005006743	CDH23 (ENSCPRG00005006959)	ENSCPRG00005008075	C10orf105 (ENSCPRG00005008083)	SLC29A3 (ENSCPRG00005008086)	UNC5B (ENSCPRG00005008264)	PCBD1 (ENSCPRG00005009234)
Cryptodira	ANCESTRAL SPECIES	6	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.j.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT01000000215701	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245
Testudinoidea	ANCESTRAL SPECIES	2	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.j.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b
Testudinidae	ANCESTRAL SPECIES	9	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.j.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00960000188766	ENSGT00950000182815.a.a.a.b
Goode s thornscrub tortoise	MODERN SPECIES	21	HNRNPH3 (ENSGEVG00005010551)	RUFY2 (ENSGEVG00005009976) #7	DNA2 (ENSGEVG00005009371) #8	SLC25A16 (ENSGEVG00005009187) #9	TET1 (ENSGEVG00005016213) #10	CCAR1 (ENSGEVG00005015856) #11	STOX1 (ENSGEVG00005015754) #12	ENSGEVG00005015727 #15	ENSGEVG00005015674 #15	KIFBP (ENSGEVG00005015643) #16	VPS26A (ENSGEVG00005015616) #18	ENSGEVG00005015603	SUPV3L1 (ENSGEVG00005015316) #19	ENSGEVG00005015142 ##22	ENSGEVG00005015031 #21	HK1 (ENSGEVG00005014984) #22	TSPAN15 (ENSGEVG00005014910) #25	NEUROG3 (ENSGEVG00005014864)	ENSGEVG00005014837	MACROH2A2 (ENSGEVG00005014809) #29	AIFM2 (ENSGEVG00005014772) #30	CHST3 (ENSGEVG00005014714)	ENSGEVG00005014597	ENSGEVG00005014429	ENSGEVG00005014038	ENSGEVG00005013966	C10orf105 (ENSGEVG00005013952)	ENSGEVG00005012881	SLC29A3 (ENSGEVG00005012748)	UNC5B (ENSGEVG00005012598)	ENSGEVG00005012553
Abingdon island giant tortoise	MODERN SPECIES	1874	ATOH7 (ENSCABG00000022936)	HNRNPH3 (ENSCABG00000022935)	RUFY2 (ENSCABG00000022934) #7	DNA2 (ENSCABG00000022933) #8	SLC25A16 (ENSCABG00000022932) #9	TET1 (ENSCABG00000022931) #10	CCAR1 (ENSCABG00000022929) #11	STOX1 (ENSCABG00000022928) #12	ENSCABG00000022927 #15	ENSCABG00000022926 #15	KIFBP (ENSCABG00000022925) #16	SRGN (ENSCABG00000022924) #17	VPS26A (ENSCABG00000022923) #18	SUPV3L1 (ENSCABG00000022922) #19	HKDC1 (ENSCABG00000022921) #21	HK1 (ENSCABG00000022919) #22	TACR2 (ENSCABG00000022917) #23	TSPAN15 (ENSCABG00000022915) #25	NEUROG3 (ENSCABG00000022914)	FAM241B (ENSCABG00000022913) #26	MACROH2A2 (ENSCABG00000022911) #29	AIFM2 (ENSCABG00000022910) #30	CHST3 (ENSCABG00000022909)
Emydidae	ANCESTRAL SPECIES	6	ENSGT00940000161556	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.b #15	ENSGT00940000155043.j.a #15	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000154865 #28	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b.g	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b
Three-toed box turtle	MODERN SPECIES	39	HNRNPH3 (ENSTMTG00000007139)	ENSTMTG00000006973 #7	DNA2 (ENSTMTG00000006717) #8	SLC25A16 (ENSTMTG00000006682) #9	ENSTMTG00000006672 #10	ENSTMTG00000006664 #10	CCAR1 (ENSTMTG00000006418) #11	STOX1 (ENSTMTG00000006384) #12	ENSTMTG00000006309 #15	ENSTMTG00000006225 #15	KIFBP (ENSTMTG00000006194) #16	ENSTMTG00000006175	VPS26A (ENSTMTG00000006155) #18	SUPV3L1 (ENSTMTG00000005038) #19	HKDC1 (ENSTMTG00000004811) #21	HK1 (ENSTMTG00000002268) #22	TACR2 (ENSTMTG00000002049) #23	TSPAN15 (ENSTMTG00000002042) #25	ENSTMTG00000002029	NEUROG3 (ENSTMTG00000002017)	FAM241B (ENSTMTG00000002011) #26	MACROH2A2 (ENSTMTG00000002005) #29	AIFM2 (ENSTMTG00000001997) #30	CHST3 (ENSTMTG00000001990)	ENSTMTG00000001983	ENSTMTG00000001976	ENSTMTG00000001962	ENSTMTG00000001946	ENSTMTG00000001906	C10orf105 (ENSTMTG00000001894)	ENSTMTG00000001888
painted turtle	MODERN SPECIES	786														SUPV3L1 (ENSCPBG00000000660) #19	HKDC1 (ENSCPBG00000000577) #21	HK1 (ENSCPBG00000000549) #22	TACR2 (ENSCPBG00000000341) #23	TSPAN15 (ENSCPBG00000000297) #25	NEUROG3 (ENSCPBG00000025953)	FAM241B (ENSCPBG00000025952) #26	ENSCPBG00000025951	COL13A1 (ENSCPBG00000025943) #28	MACROH2A2 (ENSCPBG00000025940) #29	AIFM2 (ENSCPBG00000025938) #30	CHST3 (ENSCPBG00000025937)	ENSCPBG00000025935	ENSCPBG00000025934	ENSCPBG00000025933	C10orf105 (ENSCPBG00000025932)	CDH23 (ENSCPBG00000025929)	SLC29A3 (ENSCPBG00000025927)
Chinese turtle	MODERN SPECIES	964															HKDC1 (ENSPSIG00000015788) #21	HK1 (ENSPSIG00000014935) #22	TSPAN15 (ENSPSIG00000014930) #25	ENSPSIG00000014064	NEUROG3 (ENSPSIG00000001125)	FAM241B (ENSPSIG00000014054) #26	ENSPSIG00000014049	COL13A1 (ENSPSIG00000013734) #28	MACROH2A2 (ENSPSIG00000013591) #29	AIFM2 (ENSPSIG00000013158) #30	CHST3 (ENSPSIG00000013057)	ENSPSIG00000012914	ENSPSIG00000012753	ENSPSIG00000012608	C10orf105 (ENSPSIG00000001121)	CDH23 (ENSPSIG00000007185)	ENSPSIG00000007176
Lepidosauria	ANCESTRAL SPECIES	8	ENSGT00940000153441.a.b	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j #15	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000162658.b	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163216	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245
tuatara	MODERN SPECIES	1328								ENSSPUG00000002947	ENSSPUG00000002959	MAPK10 (ENSSPUG00000003136)	DDX21 (ENSSPUG00000004088) #15	KIFBP (ENSSPUG00000004193) #16	VPS26A (ENSSPUG00000004203) #18	SUPV3L1 (ENSSPUG00000004216) #19	HKDC1 (ENSSPUG00000004238) #21	HK1 (ENSSPUG00000004260) #22	TACR2 (ENSSPUG00000004290) #23	TSPAN15 (ENSSPUG00000004301) #25	ENSSPUG00000004372
Episquamata	ANCESTRAL SPECIES	2	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j #15	ENSGT00390000013819 #16	ENSGT01040000243664	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000162658.b	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00940000156695.e.b	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b
Laterata	ANCESTRAL SPECIES		ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j #15	ENSGT00390000013819 #16	ENSGT01040000243664	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000162658.b	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00960000189995	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000156695.e.b	ENSGT00940000155245	ENSGT00950000182898.a.a.b
Argentine black and white tegu	MODERN SPECIES	22	PBLD (ENSSMRG00000008548)	HNRNPH3 (ENSSMRG00000008551)	RUFY2 (ENSSMRG00000008578) #7	DNA2 (ENSSMRG00000008579) #8	SLC25A16 (ENSSMRG00000008582) #9	TET1 (ENSSMRG00000008586) #10	ENSSMRG00000008587	CCAR1 (ENSSMRG00000008591) #11	STOX1 (ENSSMRG00000008890) #12	DDX21 (ENSSMRG00000008891) #15	KIFBP (ENSSMRG00000008894) #16	ENSSMRG00000008931	VPS26A (ENSSMRG00000008935) #18	SUPV3L1 (ENSSMRG00000008937) #19	HKDC1 (ENSSMRG00000008940) #21	HK1 (ENSSMRG00000008942) #22	TACR2 (ENSSMRG00000008946) #23	TSPAN15 (ENSSMRG00000008965) #25	ENSSMRG00000008970	NEUROG3 (ENSSMRG00000008974)	FAM241B (ENSSMRG00000008975) #26	MACROH2A2 (ENSSMRG00000009037) #29	AIFM2 (ENSSMRG00000009038) #30	CHST3 (ENSSMRG00000009040)	ENSSMRG00000009052	ENSSMRG00000009055	ENSSMRG00000009057	CDH23 (ENSSMRG00000009106)	ENSSMRG00000011734	C10orf105 (ENSSMRG00000011742)	SLC29A3 (ENSSMRG00000011764)
Common wall lizard	MODERN SPECIES	13	PBLD (ENSPMRG00000010194)	HNRNPH3 (ENSPMRG00000010199)	RUFY2 (ENSPMRG00000010208) #7	DNA2 (ENSPMRG00000010267) #8	SLC25A16 (ENSPMRG00000010530) #9	ENSPMRG00000010533 #10	CCAR1 (ENSPMRG00000010542) #11	ENSPMRG00000010564	STOX1 (ENSPMRG00000010566) #12	DDX21 (ENSPMRG00000010573) #15	KIFBP (ENSPMRG00000010585) #16	ENSPMRG00000010591	VPS26A (ENSPMRG00000010605) #18	SUPV3L1 (ENSPMRG00000010625) #19	HKDC1 (ENSPMRG00000010717) #21	HK1 (ENSPMRG00000011118) #22	TACR2 (ENSPMRG00000011123) #23	TSPAN15 (ENSPMRG00000011128) #25	ENSPMRG00000011134	NEUROG3 (ENSPMRG00000011140)	FAM241B (ENSPMRG00000011147) #26	ENSPMRG00000005177	MACROH2A2 (ENSPMRG00000005178) #29	AIFM2 (ENSPMRG00000005183) #30	CHST3 (ENSPMRG00000005190)	ENSPMRG00000005196	ENSPMRG00000005207	CDH23 (ENSPMRG00000005228)	ENSPMRG00000005293	C10orf105 (ENSPMRG00000005323)	ENSPMRG00000005327
Toxicofera	ANCESTRAL SPECIES	2	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935 #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j #15	ENSGT00390000013819 #16	ENSGT01040000243664	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000165949	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00960000189995	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Elapidae	ANCESTRAL SPECIES	4	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935.o #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j #15	ENSGT00390000013819 #16	ENSGT01040000243664	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00960000189995	ENSGT00940000163216	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b	ENSGT00390000007221.a.b
Elapidae_a	ANCESTRAL SPECIES	36	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935.o #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.c #15	ENSGT00390000013819 #16	ENSGT01040000243664	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00960000189995	ENSGT00940000163216	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Acanthophiinae	ANCESTRAL SPECIES	36	ENSGT00940000161556	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00780000122010 #8	ENSGT00940000157520 #9	ENSGT00940000158935.o #10	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043.j.c #15	ENSGT00390000013819 #16	ENSGT01040000243664	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000163077	ENSGT00940000154340.B #26	ENSGT00940000158120 #29	ENSGT00390000004582 #30	ENSGT00940000161045	ENSGT00940000156695.e.a	ENSGT00960000189995	ENSGT00940000163216	ENSGT00940000163256	ENSGT00490000043902	ENSGT00940000155245	ENSGT00950000182898.a.a.b	ENSGT00950000182815.a.a.a.b
Mainland tiger snake	MODERN SPECIES	47	ATOH7 (ENSNSUG00000014925)	PBLD (ENSNSUG00000014926)	HNRNPH3 (ENSNSUG00000014928)	RUFY2 (ENSNSUG00000014937) #7	DNA2 (ENSNSUG00000014938) #8	SLC25A16 (ENSNSUG00000014939) #9	TET1 (ENSNSUG00000014946) #10	CCAR1 (ENSNSUG00000014949) #11	STOX1 (ENSNSUG00000014954) #12	ENSNSUG00000014956 #15	KIFBP (ENSNSUG00000014961) #16	ENSNSUG00000014963	VPS26A (ENSNSUG00000014964) #18	SUPV3L1 (ENSNSUG00000014968) #19	ENSNSUG00000015073 #21	HK1 (ENSNSUG00000015074) #22	TACR2 (ENSNSUG00000015075) #23	TSPAN15 (ENSNSUG00000015076) #25	NEUROG3 (ENSNSUG00000015124)	FAM241B (ENSNSUG00000015125) #26	MACROH2A2 (ENSNSUG00000015127) #29	AIFM2 (ENSNSUG00000015128) #30	CHST3 (ENSNSUG00000015129)	PSAP (ENSNSUG00000015130)	ENSNSUG00000015131	ENSNSUG00000015132	CDH23 (ENSNSUG00000015138)	C10orf105 (ENSNSUG00000015199)	SLC29A3 (ENSNSUG00000015200)	UNC5B (ENSNSUG00000015201)
Eastern brown snake	MODERN SPECIES	61		ATOH7 (ENSPTXG00000016907)	PBLD (ENSPTXG00000016909)	HNRNPH3 (ENSPTXG00000016913)	RUFY2 (ENSPTXG00000016933) #7	DNA2 (ENSPTXG00000017410) #8	SLC25A16 (ENSPTXG00000017441) #9	TET1 (ENSPTXG00000017443) #10	CCAR1 (ENSPTXG00000017444) #11	STOX1 (ENSPTXG00000017447) #12	DDX21 (ENSPTXG00000017448) #15	KIFBP (ENSPTXG00000017449) #16	VPS26A (ENSPTXG00000017451) #18	SUPV3L1 (ENSPTXG00000017452) #19	HKDC1 (ENSPTXG00000017454) #21	HK1 (ENSPTXG00000017459) #22	TACR2 (ENSPTXG00000017461) #23	TSPAN15 (ENSPTXG00000017464) #25	NEUROG3 (ENSPTXG00000017466)	FAM241B (ENSPTXG00000017469) #26	MACROH2A2 (ENSPTXG00000017473) #29	AIFM2 (ENSPTXG00000017476) #30	CHST3 (ENSPTXG00000017488)	PSAP (ENSPTXG00000017490)	ENSPTXG00000017494	ENSPTXG00000017502	VSIR (ENSPTXG00000017510)	ENSPTXG00000017531	C10orf105 (ENSPTXG00000017566)	SLC29A3 (ENSPTXG00000017567)	UNC5B (ENSPTXG00000017568)
Blue-lipped sea krait	MODERN SPECIES	6297																HK1 (ENSLLTG00000016230) #22	ENSLLTG00000016222 #23
Indian cobra	MODERN SPECIES	3	MYPN (ENSNNAG00000003117)	ATOH7 (ENSNNAG00000003163)	PBLD (ENSNNAG00000003180)	HNRNPH3 (ENSNNAG00000003196)	RUFY2 (ENSNNAG00000003255) #7	DNA2 (ENSNNAG00000003489) #8	SLC25A16 (ENSNNAG00000003851) #9	TET1 (ENSNNAG00000003887) #10	CCAR1 (ENSNNAG00000004127) #11	ENSNNAG00000004426 #12	DDX21 (ENSNNAG00000004449) #15	KIFBP (ENSNNAG00000004571) #16	VPS26A (ENSNNAG00000004590) #18	SUPV3L1 (ENSNNAG00000004738) #19	HKDC1 (ENSNNAG00000005975) #21	HK1 (ENSNNAG00000006024) #22	TACR2 (ENSNNAG00000006070) #23	TSPAN15 (ENSNNAG00000006127) #25	NEUROG3 (ENSNNAG00000006174)	FAM241B (ENSNNAG00000006191) #26	MACROH2A2 (ENSNNAG00000006198) #29	AIFM2 (ENSNNAG00000006218) #30	ENSNNAG00000006243	CHST3 (ENSNNAG00000006258)	PSAP (ENSNNAG00000006274)	ENSNNAG00000006331	ENSNNAG00000006347	ENSNNAG00000006370	ENSNNAG00000006426	C10orf105 (ENSNNAG00000007103)	ENSNNAG00000007112
Lizard	MODERN SPECIES	829	RUFY2 (ENSACAG00000010193) #7	DNA2 (ENSACAG00000010137) #8	ENSACAG00000044778	SLC25A16 (ENSACAG00000010134) #9	TET1 (ENSACAG00000010131) #10	CCAR1 (ENSACAG00000009927) #11	STOX1 (ENSACAG00000009924) #12	DDX21 (ENSACAG00000009829) #15	ENSACAG00000035649	ENSACAG00000043921	KIFBP (ENSACAG00000009782) #16	ENSACAG00000041348	VPS26A (ENSACAG00000009758) #18	SUPV3L1 (ENSACAG00000009685) #19	HKDC1 (ENSACAG00000009326) #21	HK1 (ENSACAG00000038897) #22	ENSACAG00000043019	TACR2 (ENSACAG00000009276) #23	TSPAN15 (ENSACAG00000009256) #25	ENSACAG00000009175	ENSACAG00000038513	FAM241B (ENSACAG00000042927) #26
Anura	ANCESTRAL SPECIES	124	ENSGT00940000160572	ENSGT00940000155493	ENSGT00390000008787.b	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00900000142007	ENSGT00940000158658	ENSGT00940000155525	ENSGT00740000115593	ENSGT00530000063672.a #11	ENSGT00520000055589.c #12	ENSGT00940000155043 #15	ENSGT00390000013819 #16	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000005889	ENSGT00940000157520 #9	ENSGT00780000122010 #8	ENSGT00940000157274	ENSGT00940000161556	ENSGT00940000153441.a.b	ENSGT00940000158924	ENSGT00940000159378
Leishan spiny toad	MODERN SPECIES	9	ENSLLEG00000024051	ANXA7 (ENSLLEG00000023680)	SORBS1 (ENSLLEG00000023502)	ENSLLEG00000023475	PDLIM1 (ENSLLEG00000023273)	HELLS (ENSLLEG00000022741)	ENSLLEG00000022692	ENSLLEG00000022673	CCAR1 (ENSLLEG00000022193) #11	STOX1 (ENSLLEG00000022099) #12	ENSLLEG00000021534 #15	KIFBP (ENSLLEG00000021192) #16	ENSLLEG00000021159	SUPV3L1 (ENSLLEG00000020811) #19	ENSLLEG00000020745	HK1 (ENSLLEG00000019789) #22	ENSLLEG00000019720	RUFY2 (ENSLLEG00000019486) #7	HNRNPH3 (ENSLLEG00000019331)	BLOC1S2 (ENSLLEG00000019253)	SLC25A16 (ENSLLEG00000019068) #9	DNA2 (ENSLLEG00000018895) #8	PKD2L1 (ENSLLEG00000018579)	ATOH7 (ENSLLEG00000018515)	MYPN (ENSLLEG00000018050)	HERC4 (ENSLLEG00000016964)	ENSLLEG00000016736	ENSLLEG00000016718	SIRT1 (ENSLLEG00000016368)	ENSLLEG00000016117	LRRTM3 (ENSLLEG00000016067)
Frog	MODERN SPECIES	7	anxa7 (ENSXETG00000010645)	ENSXETG00000044427	sorbs1 (ENSXETG00000008821)	ENSXETG00000039833	pdlim1 (ENSXETG00000008826)	cenpt (ENSXETG00000041156)	hells (ENSXETG00000008830)	kifbp (ENSXETG00000008834) #16	ddx21 (ENSXETG00000008836)	ENSXETG00000048228	stox1 (ENSXETG00000008837) #12	ccar1 (ENSXETG00000008844) #11	vps26a (ENSXETG00000008848) #18	supv3l1 (ENSXETG00000008852) #19	ENSXETG00000042162 #21	hk1 (ENSXETG00000008860) #22	dysf (ENSXETG00000020490)	rufy2 (ENSXETG00000023565) #7	hnrnph3 (ENSXETG00000023567)	bloc1s2 (ENSXETG00000023568)	slc25a16 (ENSXETG00000030903) #9	dnajc12 (ENSXETG00000039996)	herc4 (ENSXETG00000023570)	mypn (ENSXETG00000031336)	atoh7 (ENSXETG00000023575)	pkd2l1 (ENSXETG00000030335)	ENSXETG00000030311	cox5b.2 (ENSXETG00000025435)	fam149b1 (ENSXETG00000031180)	ecd (ENSXETG00000023586)	sirt1 (ENSXETG00000023588)
Coelacanth	MODERN SPECIES	275										DDX21 (ENSLACG00000000658) #15	ENSLACG00000003594	KIFBP (ENSLACG00000004273) #16	VPS26A (ENSLACG00000007483) #18	SUPV3L1 (ENSLACG00000008028) #19	HKDC1 (ENSLACG00000008562) #21	HK1 (ENSLACG00000009420) #22	TACR2 (ENSLACG00000010555) #23	TSPAN15 (ENSLACG00000011976) #25	RUFY2 (ENSLACG00000012724) #7	HNRNPH3 (ENSLACG00000013291)	PBLD (ENSLACG00000013543)	DNA2 (ENSLACG00000013651) #8	SLC25A16 (ENSLACG00000014037) #9	ENSLACG00000014877 #10	ENSLACG00000014952	eif4e1c (ENSLACG00000015230)	ENSLACG00000015370	BLOC1S2 (ENSLACG00000015651)	ENSLACG00000015792	NFKB2 (ENSLACG00000016308)	PSD (ENSLACG00000016416)
Actinopterygii	ANCESTRAL SPECIES	96	ENSGT00940000154115.c.b	ENSGT00940000155278	ENSGT00940000158658	ENSGT00900000142007	ENSGT00940000155525	ENSGT00740000116794	ENSGT00740000115593	ENSGT00860000134673	ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8	ENSGT00520000055589.c #12	ENSGT00530000063672.a #11	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b	ENSGT00940000166192	ENSGT00940000158935 #10	ENSGT00940000157520 #9	ENSGT00940000156111	ENSGT00940000158282
Neopterygii	DUPLICATION
Neopterygii	ANCESTRAL SPECIES																	ENSGT00950000182787.A.a #22
Spotted gar	MODERN SPECIES	671	slc25a28 (ENSLOCG00000009024)	nkx3.3 (ENSLOCG00000009031)	nkx2.3 (ENSLOCG00000009050)	got1 (ENSLOCG00000009054)	CNNM1 (ENSLOCG00000009070)	HPSE2 (ENSLOCG00000009078)	hps1 (ENSLOCG00000009087)	st3gal7 (ENSLOCG00000009100)	ENSLOCG00000009110	ddx21 (ENSLOCG00000009123) #15	irf1a (ENSLOCG00000009136)	kifbp (ENSLOCG00000009142) #16	vps26a (ENSLOCG00000009150) #18	supv3l1 (ENSLOCG00000009159) #19	hkdc1 (ENSLOCG00000009177) #21	hk1 (ENSLOCG00000009187) #22	tacr2 (ENSLOCG00000009218) #23	tspan15 (ENSLOCG00000009224) #25	rufy2 (ENSLOCG00000009235) #7	HNRNPH3 (ENSLOCG00000009247)	pbld (ENSLOCG00000009266)	DNA2 (ENSLOCG00000009273) #8	stox1 (ENSLOCG00000009290) #12	ccar1 (ENSLOCG00000009307) #11	si:dkey-228d14.5 (ENSLOCG00000009329)	eif4e1c (ENSLOCG00000009334)	ENSLOCG00000009344 #10	alox5b.2 (ENSLOCG00000009354)	marchf8 (ENSLOCG00000009384)	zfand4 (ENSLOCG00000009414)	ENSLOCG00000009434
Osteoglossocephalai	ANCESTRAL SPECIES																	ENSGT00950000182787.A.a #22
Osteoglossiformes	ANCESTRAL SPECIES	3	ENSGT00940000155701.D	ENSGT00940000157057.f	ENSGT00640000091563.a	ENSGT00940000159956	ENSGT00510000046988	ENSGT00530000064569.b	ENSGT00510000052164	ENSGT00990000204590	ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT01100000264892	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8	ENSGT00940000158427	ENSGT00390000018879	ENSGT00940000155172	ENSGT00940000159781.a	ENSGT00530000063168.b	ENSGT00550000075035	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.e.a
P. kingsleyae	MODERN SPECIES	188	ppp2r5d (ENSPKIG00000009600)	ENSPKIG00000009562	ENSPKIG00000009537	CUL7 (ENSPKIG00000009345)	SYNDIG1 (ENSPKIG00000009263)	ENSPKIG00000009194	apmap (ENSPKIG00000009133)	ENSPKIG00000009111	ENSPKIG00000009072	FAM98A (ENSPKIG00000009038)	rasgrp3 (ENSPKIG00000008983)	ENSPKIG00000008935	zswim8 (ENSPKIG00000008737)	ENSPKIG00000008627	chchd1 (ENSPKIG00000008612)	hk1 (ENSPKIG00000008533) #22	ENSPKIG00000008489	tspan15 (ENSPKIG00000008464) #25	rufy2 (ENSPKIG00000008428) #7	HNRNPH3 (ENSPKIG00000008373)	pbld (ENSPKIG00000008337)	DNA2 (ENSPKIG00000008300) #8	ppm1g (ENSPKIG00000008275)	zgc:77929 (ENSPKIG00000008261)	phf10 (ENSPKIG00000008224)	dld (ENSPKIG00000008175)	fam120b (ENSPKIG00000008128)	psmb1 (ENSPKIG00000008096)	pdcd2 (ENSPKIG00000008058)	tbp (ENSPKIG00000008077)	sec23ip (ENSPKIG00000008003)
Asian bonytongue	MODERN SPECIES	19	ENSSFOG00015014359	mpc1 (ENSSFOG00015014411)	ENSSFOG00015014420	ENSSFOG00015014485	ENSSFOG00015026610	ENSSFOG00015027797	ENSSFOG00015014559	ENSSFOG00015014584	ddx21 (ENSSFOG00015014610) #15	ENSSFOG00015014675	ENSSFOG00015031974	kifbp (ENSSFOG00015014707) #16	ENSSFOG00015025158	vps26a (ENSSFOG00015014736) #18	supv3l1 (ENSSFOG00015014751) #19	hk1 (ENSSFOG00015014842) #22	tacr2 (ENSSFOG00015014918) #23	tspan15 (ENSSFOG00015014923) #25	rufy2 (ENSSFOG00015014951) #7	HNRNPH3 (ENSSFOG00015015000)	pbld (ENSSFOG00015027618)	DNA2 (ENSSFOG00015015086) #8	ppm1g (ENSSFOG00015015132)	zgc:77929 (ENSSFOG00015015168)	phf10 (ENSSFOG00015015180)	dld (ENSSFOG00015015205)	fam120b (ENSSFOG00015015233)	psmb1 (ENSSFOG00015015260)	tbp (ENSSFOG00015015278)	pdcd2 (ENSSFOG00015032774)	RHOU (ENSSFOG00015015316)
Clupeocephala	ANCESTRAL SPECIES	768																ENSGT00950000182787.A.a #22	ENSGT00940000160859
Euteleosteomorpha	ANCESTRAL SPECIES	18	ENSGT00940000155557.jc.b	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00390000003512.r	ENSGT00940000156048.e.a.a	ENSGT00390000011529	ENSGT00940000153342.b	ENSGT00940000158966	ENSGT00980000199991	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956
Acanthomorphata	ANCESTRAL SPECIES	78	ENSGT00940000155557.jc.b	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00390000003512.r	ENSGT00940000156048.e.a.a.a.a	ENSGT00390000011529	ENSGT00940000153342.b	ENSGT00940000158966	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956	ENSGT00940000178862
Euacanthomorphacea	ANCESTRAL SPECIES	37	ENSGT00940000155557.jc.b	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00390000003512.r	ENSGT00940000156048.e.a.a.a.a	ENSGT00390000011529	ENSGT00940000153342.b	ENSGT00940000158966	ENSGT00940000177040	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956
Percomorphaceae	ANCESTRAL SPECIES	37	ENSGT00390000018879	ENSGT00390000005535	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00390000003512.r	ENSGT00940000156048.e.a.a.a.a	ENSGT00390000011529	ENSGT00940000153342.b	ENSGT00940000158966	ENSGT00940000177040	ENSGT00390000002789	ENSGT00990000204616	ENSGT01100000263977	ENSGT00940000166495	ENSGT00390000007529	ENSGT00550000074956
Tiger tail seahorse	MODERN SPECIES	106	ENSHCOG00000001927	zgc:77929 (ENSHCOG00000001924)	cdc6 (ENSHCOG00000001908)	ENSHCOG00000000059	ltv1 (ENSHCOG00000001882)	ENSHCOG00000021081	capn9 (ENSHCOG00000021059)	taf5l (ENSHCOG00000021046)	vps54 (ENSHCOG00000021036)	ENSHCOG00000020941	ENSHCOG00000020932	ptp4a1 (ENSHCOG00000020907)	lgsn (ENSHCOG00000020893)	myom2a (ENSHCOG00000020868)	ENSHCOG00000020782 ##22	hk1 (ENSHCOG00000020441) #22	ZBTB45 (ENSHCOG00000020415)	dla (ENSHCOG00000020390)	ENSHCOG00000020379	ENSHCOG00000020363
Percomorphaceae_B	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Percomorphaceae_C	ANCESTRAL SPECIES	3	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Percomorphaceae_D	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Anabantaria	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Anabantoidei	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a	ENSGT00940000162476
Climbing perch	MODERN SPECIES		ENSATEG00000021329	ENSATEG00000021334	ENSATEG00000021341	mrpl45 (ENSATEG00000021376)	ENSATEG00000021381	socs7 (ENSATEG00000021418)	sp2 (ENSATEG00000021438)	ENSATEG00000021470	mrpl4 (ENSATEG00000030025)	ENSATEG00000021704	ENSATEG00000028274	ptp4a1 (ENSATEG00000021743)	lgsn (ENSATEG00000021753)	ENSATEG00000021763	myom2a (ENSATEG00000021776)	ENSATEG00000021839 #22	ENSATEG00000021862	ENSATEG00000021885	ENSATEG00000021898	ENSATEG00000021914	ENSATEG00000021938	slit1b (ENSATEG00000021971)	ENSATEG00000022021	ENSATEG00000022028	hoga1 (ENSATEG00000022037)	CNNM1 (ENSATEG00000022052)	GOT1 (ENSATEG00000022085)	NKX2-3 (ENSATEG00000022096)	SLC25A28 (ENSATEG00000022106)	ENTPD7 (ENSATEG00000025313)	ENSATEG00000022142
Siamese fighting fish	MODERN SPECIES		mrpl21 (ENSBSLG00000003105)	zgc:77929 (ENSBSLG00000003109)	npepps (ENSBSLG00000003886)	mrpl45 (ENSBSLG00000004192)	ENSBSLG00000004205	socs7 (ENSBSLG00000004241)	sp2 (ENSBSLG00000004249)	ENSBSLG00000004264	mrpl4 (ENSBSLG00000004763)	ENSBSLG00000004846	ENSBSLG00000004910	ptp4a1 (ENSBSLG00000004953)	lgsn (ENSBSLG00000005047)	ENSBSLG00000005104	myom2a (ENSBSLG00000005201)	hk1 (ENSBSLG00000006755) #22	ENSBSLG00000007532	dla (ENSBSLG00000007537)	ENSBSLG00000007551	ENSBSLG00000004956	slit1b (ENSBSLG00000005052)	ENSBSLG00000006317	MORN4 (ENSBSLG00000006339)	hoga1 (ENSBSLG00000006434)	CNNM1 (ENSBSLG00000006707)	GOT1 (ENSBSLG00000006808)	NKX2-3 (ENSBSLG00000007044)	slc25a28 (ENSBSLG00000007054)	ENTPD7 (ENSBSLG00000007064)	ENSBSLG00000007135	atpv0e2 (ENSBSLG00000007148)
Zig-zag eel	MODERN SPECIES		ENSMAMG00000001083	ENSMAMG00000001090	ENSMAMG00000001101	mrpl45 (ENSMAMG00000001198)	ENSMAMG00000001264	socs7 (ENSMAMG00000001564)	sp2 (ENSMAMG00000001599)	ENSMAMG00000001635	mrpl4 (ENSMAMG00000001736)	ENSMAMG00000001789	ENSMAMG00000028525	ptp4a1 (ENSMAMG00000001896)	lgsn (ENSMAMG00000001937)	ENSMAMG00000026699	myom2a (ENSMAMG00000002012)	ENSMAMG00000002050 #22	ENSMAMG00000002095	ENSMAMG00000002124	ENSMAMG00000002157	ENSMAMG00000028223	ENSMAMG00000026924	ENSMAMG00000002198	ENSMAMG00000024926	ENSMAMG00000002332	ENSMAMG00000002242	ENSMAMG00000002345	ENSMAMG00000002278	ENSMAMG00000003537	ENSMAMG00000002460	ENSMAMG00000025764	ENSMAMG00000002408
Carangaria	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Carangaria_A	ANCESTRAL SPECIES	14											ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Barramundi perch	DUPLICATION
Barramundi perch	MODERN SPECIES	167										ENSLCAG00010020017	col9a1a (ENSLCAG00010020000)	ptp4a1 (ENSLCAG00010019972)	lgsn (ENSLCAG00010019964)	ENSLCAG00010019958	myom2a (ENSLCAG00010019470)	hk1 (ENSLCAG00010018183) #22	ENSLCAG00010017985	dla (ENSLCAG00010017982)	ENSLCAG00010017981	ENSLCAG00010017979	ARHGAP19 (ENSLCAG00010017975)	slit1b (ENSLCAG00010017878)	ENSLCAG00010017832	MORN4 (ENSLCAG00010017826)	hoga1 (ENSLCAG00010017823)	CNNM1 (ENSLCAG00010017811)	GOT1 (ENSLCAG00010017785)	NKX2-3 (ENSLCAG00010017780)	slc25a28 (ENSLCAG00010017778)	ENTPD7 (ENSLCAG00010017632)	ENSLCAG00010017607
Barramundi perch	MODERN SPECIES	1078																hk1 (ENSLCAG00010016939) #22
Seriola	ANCESTRAL SPECIES	18									ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.b.b.c.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.b.a	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000154063.C.a.b	ENSGT00530000063615.b	ENSGT00940000155647.bb	ENSGT00950000182993.B.b	ENSGT00940000159016	ENSGT00390000002121	ENSGT00940000156518.A	ENSGT00900000141021.b.b.f	ENSGT00940000166436	ENSGT00940000159327.u.b	ENSGT00530000063646.b	ENSGT01030000234638.b.a.a
Yellowtail amberjack	MODERN SPECIES	3021							ENSSLDG00000017664	ENSSLDG00000017685	ENSSLDG00000017707	ENSSLDG00000017726	col9a1a (ENSSLDG00000017752)	ptp4a1 (ENSSLDG00000017801)	lgsn (ENSSLDG00000017831)	ENSSLDG00000017858	myom2a (ENSSLDG00000017896)	hk1 (ENSSLDG00000017985) #22	ENSSLDG00000018055	dla (ENSSLDG00000018075)	ENSSLDG00000018105	ENSSLDG00000018122	ENSSLDG00000018135	c3b.2 (ENSSLDG00000018187)	ENSSLDG00000018260	yju2b (ENSSLDG00000018279)	PSPN (ENSSLDG00000018308)	wdr83 (ENSSLDG00000018324)	wdr83os (ENSSLDG00000018352)	cacna1ab (ENSSLDG00000018378)	ENSSLDG00000018451	ENSSLDG00000018462	ENSSLDG00000018476
Greater amberjack	MODERN SPECIES	156	GOT1 (ENSSDUG00000013881)	ARHGAP19 (ENSSDUG00000013857)	slit1b (ENSSDUG00000013813)	ENSSDUG00000013796	ENSSDUG00000013787	MORN4 (ENSSDUG00000013760)	hoga1 (ENSSDUG00000013736)	CNNM1 (ENSSDUG00000013708)	ENSSDUG00000013687	ENSSDUG00000013679	ENSSDUG00000013671	ptp4a1 (ENSSDUG00000013652)	lgsn (ENSSDUG00000013633)	ENSSDUG00000013627	myom2a (ENSSDUG00000013571)	hk1 (ENSSDUG00000013507) #22	ENSSDUG00000013479	dla (ENSSDUG00000013455)	ENSSDUG00000013444	ENSSDUG00000013438	ENSSDUG00000013428	ENSSDUG00000013418	ENSSDUG00000013405	ENSSDUG00000013391	ENSSDUG00000013373	ENSSDUG00000013358	ENSSDUG00000013334	c3b.2 (ENSSDUG00000013225)	ENSSDUG00000013140	yju2b (ENSSDUG00000013120)	gtf3aa (ENSSDUG00000013111)
Pleuronectoidei	ANCESTRAL SPECIES	26	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Tongue sole	MODERN SPECIES	19	mrpl45 (ENSCSEG00000020713)	ENSCSEG00000020706	socs7 (ENSCSEG00000020704)	sp2 (ENSCSEG00000020595)	sp2 (ENSCSEG00000020591)	ENSCSEG00000020585	ENSCSEG00000020582	mrpl4 (ENSCSEG00000020580)	ENSCSEG00000020578	ENSCSEG00000020572	ENSCSEG00000020570	ptp4a1 (ENSCSEG00000020563)	lgsn (ENSCSEG00000020560)	ENSCSEG00000020558	myom2a (ENSCSEG00000020547)	hk1 (ENSCSEG00000020535) #22	ENSCSEG00000020532	dla (ENSCSEG00000020522)	RHOU (ENSCSEG00000020517)	ARHGAP19 (ENSCSEG00000020513)	slit1b (ENSCSEG00000020505)
Turbot	MODERN SPECIES	20	ENSSMAG00000020863	ENSSMAG00000020859	ENSSMAG00000020858	ENSSMAG00000020855	mrpl45 (ENSSMAG00000020857)	ENSSMAG00000020853	socs7 (ENSSMAG00000021123)	sp2 (ENSSMAG00000021122)	ENSSMAG00000021121	mrpl4 (ENSSMAG00000021118)	ENSSMAG00000021117	ptp4a1 (ENSSMAG00000021116)	lgsn (ENSSMAG00000021115)	ENSSMAG00000021114	myom2a (ENSSMAG00000021113)	ENSSMAG00000021112 #22	ENSSMAG00000021111	ENSSMAG00000021110	ENSSMAG00000030106	ENSSMAG00000021108	slit1b (ENSSMAG00000021107)	ENSSMAG00000021106	ENSSMAG00000035022	ENSSMAG00000032297	hoga1 (ENSSMAG00000035315)	CNNM1 (ENSSMAG00000021103)	GOT1 (ENSSMAG00000021101)	NKX2-3 (ENSSMAG00000021102)	SLC25A28 (ENSSMAG00000021100)	ENTPD7 (ENSSMAG00000021099)	ENSSMAG00000021098
Eupercaria	ANCESTRAL SPECIES	2	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Tetraodontidae	ANCESTRAL SPECIES	16	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590.t	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00940000177979	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a	ENSGT00940000162476
Fugu	MODERN SPECIES	8	ENSTRUG00000026041	mrpl45 (ENSTRUG00000007499)	ENSTRUG00000026571	socs7 (ENSTRUG00000020501)	sp2 (ENSTRUG00000007642)	ENSTRUG00000007839	mrpl4 (ENSTRUG00000008532)	ENSTRUG00000020874	ENSTRUG00000027830	ENSTRUG00000008551	ptp4a1 (ENSTRUG00000032305)	lgsn (ENSTRUG00000008845)	ENSTRUG00000029475	ENSTRUG00000022496	myom2a (ENSTRUG00000008910)	hk1 (ENSTRUG00000009458) #22	ENSTRUG00000010240	dla (ENSTRUG00000010455)	ENSTRUG00000000596	RAB1A (ENSTRUG00000029783)	SPRED2 (ENSTRUG00000000716)	ENSTRUG00000000765	ENSTRUG00000025741	ppp3r1a (ENSTRUG00000025969)	cnrip1a (ENSTRUG00000023857)	fbxo48 (ENSTRUG00000000963)	APLF (ENSTRUG00000000975)	prokr1a (ENSTRUG00000022723)	ENSTRUG00000024122	b3gnt2a (ENSTRUG00000001047)	commd1 (ENSTRUG00000023095)
Tetraodon	MODERN SPECIES	10	ENSTNIG00000000174	mrpl45 (ENSTNIG00000006293)	ENSTNIG00000006292	socs7 (ENSTNIG00000006291)	sp2 (ENSTNIG00000006290)	ENSTNIG00000000050	ENSTNIG00000006289	ENSTNIG00000001723	mrpl4 (ENSTNIG00000003265)	ENSTNIG00000003266	col9a1a (ENSTNIG00000003267)	ptp4a1 (ENSTNIG00000003268)	lgsn (ENSTNIG00000003269)	ENSTNIG00000003270	myom2a (ENSTNIG00000003271)	hk1 (ENSTNIG00000003272) #22	ENSTNIG00000003273	dla (ENSTNIG00000003274)	ENSTNIG00000000639	ARHGAP19 (ENSTNIG00000003630)	slit1b (ENSTNIG00000003631)
Eupecaria_A	ANCESTRAL SPECIES	3	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Ballan wrasse	MODERN SPECIES	133	zgc:77929 (ENSLBEG00000001283)	npepps (ENSLBEG00000001199)	mrpl45 (ENSLBEG00000001166)	ENSLBEG00000001130	socs7 (ENSLBEG00000001103)	sp2 (ENSLBEG00000001053)	ENSLBEG00000001027	ENSLBEG00000000990	mrpl4 (ENSLBEG00000000848)	ENSLBEG00000000770	ENSLBEG00000000752	ptp4a1 (ENSLBEG00000000700)	lgsn (ENSLBEG00000000662)	ENSLBEG00000000635	myom2a (ENSLBEG00000000581)	hk1 (ENSLBEG00000000465) #22	ENSLBEG00000000447	dla (ENSLBEG00000000377)	RHOU (ENSLBEG00000000359)	ARHGAP19 (ENSLBEG00000000329)	slit1b (ENSLBEG00000028531)	ENSLBEG00000028529
Eupecaria_B	ANCESTRAL SPECIES	1	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000177979	ENSGT00940000157556.a.a
Perciformes	ANCESTRAL SPECIES	2	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00980000198884	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000177979	ENSGT00940000157556.a.a
Perciformes_a	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000168493	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Channel bull blenny	MODERN SPECIES	275	zgc:77929 (ENSCGOG00000018183)	npepps (ENSCGOG00000018195)	mrpl45 (ENSCGOG00000018530)	ENSCGOG00000018533	ENSCGOG00000018535	socs7 (ENSCGOG00000018539)	ENSCGOG00000018549	ENSCGOG00000018599	mrpl4 (ENSCGOG00000018602)	ENSCGOG00000018604	ENSCGOG00000018606	ptp4a1 (ENSCGOG00000018609)	lgsn (ENSCGOG00000018643)	ENSCGOG00000018644	myom2a (ENSCGOG00000018657)	hk1 (ENSCGOG00000018845) #22	ENSCGOG00000022267	dla (ENSCGOG00000022270)	ENSCGOG00000022272	ENSCGOG00000022276	ENSCGOG00000022278	ENSCGOG00000022280	ENSCGOG00000022281	ENSCGOG00000022283	ENSCGOG00000022289	ARHGAP19 (ENSCGOG00000022294)	ENSCGOG00000022300	ENSCGOG00000022304	MORN4 (ENSCGOG00000022305)
Pike perch	MODERN SPECIES	151	mrpl21 (ENSSLUG00000013483)	zgc:77929 (ENSSLUG00000013486)	npepps (ENSSLUG00000013506)	mrpl45 (ENSSLUG00000013559)	ENSSLUG00000013573	socs7 (ENSSLUG00000013603)	sp2 (ENSSLUG00000013610)	ENSSLUG00000013658	mrpl4 (ENSSLUG00000014661)	ENSSLUG00000014668	ENSSLUG00000014673	ptp4a1 (ENSSLUG00000014677)	lgsn (ENSSLUG00000014684)	ENSSLUG00000014694	myom2a (ENSSLUG00000014845)	hk1 (ENSSLUG00000017014) #22	ENSSLUG00000017331	dla (ENSSLUG00000017336)	ENSSLUG00000017349	ENSSLUG00000017356	ENSSLUG00000017362	ENSSLUG00000017371	ARHGAP19 (ENSSLUG00000017387)	slit1b (ENSSLUG00000017676)	ENSSLUG00000018035	ENSSLUG00000018040	ENSSLUG00000018044	hoga1 (ENSSLUG00000018050)	CNNM1 (ENSSLUG00000018055)	GOT1 (ENSSLUG00000018061)	ENSSLUG00000018067
Cottioidei	ANCESTRAL SPECIES	40	ENSGT00940000155557.jc.b	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000177979	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00940000162476	ENSGT00940000161036.B.b	ENSGT00530000063615.b
Stickleback	MODERN SPECIES	4	ENSGACG00000019826	yju2b (ENSGACG00000019822)	ENSGACG00000019821	wdr83 (ENSGACG00000019818)	wdr83os (ENSGACG00000019815)	ENSGACG00000019813	sp2 (ENSGACG00000019811)	ENSGACG00000019810	ENSGACG00000019809	mrpl4 (ENSGACG00000019808)	ENSGACG00000019807	col9a1a (ENSGACG00000019798)	ptp4a1 (ENSGACG00000019788)	lgsn (ENSGACG00000019786)	myom2a (ENSGACG00000019784)	hk1 (ENSGACG00000019782) #22	zgc:77929 (ENSGACG00000019781)	ENSGACG00000019780	WIPF2 (ENSGACG00000019779)	ENSGACG00000019778	ENSGACG00000019775	ENSGACG00000019774	ENSGACG00000019773	nup133 (ENSGACG00000019771)	taf5l (ENSGACG00000019769)	capn9 (ENSGACG00000019761)	ltv1 (ENSGACG00000019756)	ENSGACG00000019754	ENSGACG00000019752	pus10 (ENSGACG00000019749)	cct4 (ENSGACG00000019739)
Eupecaria_C	ANCESTRAL SPECIES	14	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.a.a.b.l	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.a.a.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a
Gilthead seabream	MODERN SPECIES		zgc:77929 (ENSSAUG00010002051)	npepps (ENSSAUG00010002068)	mrpl45 (ENSSAUG00010002162)	ENSSAUG00010002174	ENSSAUG00010002306	socs7 (ENSSAUG00010002314)	sp2 (ENSSAUG00010002349)	ENSSAUG00010002371	mrpl4 (ENSSAUG00010002492)	ENSSAUG00010002500	col9a1a (ENSSAUG00010002506)	ptp4a1 (ENSSAUG00010002515)	lgsn (ENSSAUG00010002519)	ENSSAUG00010002524	myom2a (ENSSAUG00010002573)	hk1 (ENSSAUG00010006880) #22	ENSSAUG00010013406	dla (ENSSAUG00010013409)	ENSSAUG00010013412	ENSSAUG00010013424	ENSSAUG00010013426	ENSSAUG00010013428	ENSSAUG00010013433	ENSSAUG00010013435	ENSSAUG00010013436	ENSSAUG00010013438	nipal4 (ENSSAUG00010013441)	ARHGAP19 (ENSSAUG00010013459)	slit1b (ENSSAUG00010013502)	MORN4 (ENSSAUG00010017715)	ENSSAUG00010017717
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	13	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a	ENSGT00940000162476
European seabass	MODERN SPECIES	20	ENSDLAG00005032328	ENSDLAG00005019545	ENSDLAG00005019562	ENSDLAG00005031581	socs7 (ENSDLAG00005020035)	sp2 (ENSDLAG00005020071)	ENSDLAG00005020090	mrpl4 (ENSDLAG00005020598)	ENSDLAG00005029040	ENSDLAG00005020609	col9a1a (ENSDLAG00005020625)	ptp4a1 (ENSDLAG00005020648)	lgsn (ENSDLAG00005020670)	ENSDLAG00005020677	myom2a (ENSDLAG00005020729)	ENSDLAG00005022130 #22	ENSDLAG00005022146	ENSDLAG00005022238	ENSDLAG00005017662	ENSDLAG00005020174	ENSDLAG00005017832	ENSDLAG00005001355	slit1b (ENSDLAG00005001600)	ENSDLAG00005032028	ENSDLAG00005031665	hoga1 (ENSDLAG00005004866)	ENSDLAG00005004880	ENSDLAG00005004902	ENSDLAG00005004960	ENSDLAG00005005184	ENSDLAG00005005654
Large yellow croaker	MODERN SPECIES	481	npepps (ENSLCRG00005014373)	mrpl45 (ENSLCRG00005014370)	ENSLCRG00005014369	socs7 (ENSLCRG00005014360)	sp2 (ENSLCRG00005014359)	ENSLCRG00005014314	ENSLCRG00005014312	mrpl4 (ENSLCRG00005014310)	ENSLCRG00005014309	col9a1a (ENSLCRG00005014308)	ptp4a1 (ENSLCRG00005014307)	ENSLCRG00005014306	lgsn (ENSLCRG00005014305)	ENSLCRG00005014304	ENSLCRG00005014303	hk1 (ENSLCRG00005010263) #22	myom2a (ENSLCRG00005010193)	ENSLCRG00005010180	dla (ENSLCRG00005010176)	RHOU (ENSLCRG00005010174)	ENSLCRG00005010172	ARHGAP19 (ENSLCRG00005010166)	slit1b (ENSLCRG00005002787)	ENSLCRG00005023347	MORN4 (ENSLCRG00005023346)	hoga1 (ENSLCRG00005023344)	CNNM1 (ENSLCRG00005023342)	GOT1 (ENSLCRG00005023329)	ENSLCRG00005023326	slc25a28 (ENSLCRG00005023325)	ENTPD7 (ENSLCRG00005023168)
Ovalentaria	ANCESTRAL SPECIES		ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Atherinomorphae	ANCESTRAL SPECIES	46	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Oryzias	ANCESTRAL SPECIES	34	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Oryzias_b	ANCESTRAL SPECIES	36	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT01030000237709	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a	ENSGT00940000162476	ENSGT01070000253760.b.a.a.a.b.a.a.a.b.b
Indian medaka	MODERN SPECIES	21	ENSOMEG00000010710	ENSOMEG00000010726	ENSOMEG00000010739	ENSOMEG00000010757	ENSOMEG00000010776	paqr7b (ENSOMEG00000010782)	mrpl4 (ENSOMEG00000010800)	ENSOMEG00000010846	ENSOMEG00000010866	ENSOMEG00000010877	ENSOMEG00000010888	ptp4a1 (ENSOMEG00000010915)	lgsn (ENSOMEG00000010937)	ENSOMEG00000010956	myom2a (ENSOMEG00000000267)	hk1 (ENSOMEG00000011203) #22	ENSOMEG00000011246	dla (ENSOMEG00000011280)	ENSOMEG00000011304	ARHGAP19 (ENSOMEG00000011381)	ENSOMEG00000011408	ENSOMEG00000011452	MORN4 (ENSOMEG00000011473)	hoga1 (ENSOMEG00000011497)	CNNM1 (ENSOMEG00000011514)	GOT1 (ENSOMEG00000011541)	NKX2-3 (ENSOMEG00000011553)	slc25a28 (ENSOMEG00000011564)	ENTPD7 (ENSOMEG00000011604)	ENSOMEG00000011680	atpv0e2 (ENSOMEG00000011709)
Javanese ricefish	MODERN SPECIES		mrpl4 (ENSOJAG00000000204)	ENSOJAG00000000250	SLC29A1 (ENSOJAG00000000290)	ENSOJAG00000000316	ENSOJAG00000000324	tmem178a (ENSOJAG00000000441)	soul4 (ENSOJAG00000000453)	eif4a3 (ENSOJAG00000000464)	ENSOJAG00000000489	opn6a (ENSOJAG00000000503)	EOLA1 (ENSOJAG00000000510)	ENSOJAG00000000536	ptp4a1 (ENSOJAG00000000548)	lgsn (ENSOJAG00000000560)	ENSOJAG00000000571	hk1 (ENSOJAG00000000858) #22	ENSOJAG00000001402	ENSOJAG00000001408	dla (ENSOJAG00000001417)	ENSOJAG00000001428	ARHGAP19 (ENSOJAG00000001434)	ENSOJAG00000002037	ENSOJAG00000002057	hoga1 (ENSOJAG00000002081)	CNNM1 (ENSOJAG00000002100)	GOT1 (ENSOJAG00000002129)	NKX2-3 (ENSOJAG00000002162)	slc25a28 (ENSOJAG00000002173)	ENTPD7 (ENSOJAG00000002194)	ENSOJAG00000002382	ENSOJAG00000002391
Oryzias_a	ANCESTRAL SPECIES	59	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000154847.m	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Chinese medaka	MODERN SPECIES	468				ENSOSIG00000016262	MRPL21 (ENSOSIG00000016256)	zgc:77929 (ENSOSIG00000016251)	npepps (ENSOSIG00000016234)	ENSOSIG00000016232	ENSOSIG00000016229	ENSOSIG00000016217	sp2 (ENSOSIG00000016216)	mrpl4 (ENSOSIG00000016211)	ENSOSIG00000016210	col9a1a (ENSOSIG00000016207)	ENSOSIG00000016205	hk1 (ENSOSIG00000016036) #22	ENSOSIG00000016024	dla (ENSOSIG00000016023)	ENSOSIG00000016019	ARHGAP19 (ENSOSIG00000016016)
Japanese Medaka HdrR	MODERN SPECIES		npepps (ENSORLG00000000111)	mrpl45 (ENSORLG00000000106)	ENSORLG00000025721	ENSORLG00000030230	ENSORLG00000027954	sp2 (ENSORLG00000000102)	ENSORLG00000000094	ENSORLG00000000089	mrpl4 (ENSORLG00000000085)	ENSORLG00000000083	col9a1a (ENSORLG00000028143)	ptp4a1 (ENSORLG00000000081)	lgsn (ENSORLG00000000080)	ENSORLG00000000078	myom2a (ENSORLG00000000075)	HK1 (ENSORLG00000000069) #22	ENSORLG00000026423	dla (ENSORLG00000027625)	ENSORLG00000000064	ARHGAP19 (ENSORLG00000000062)	ENSORLG00000000055	ENSORLG00000027690	ENSORLG00000027792	ENSORLG00000000044	ENSORLG00000000043	hoga1 (ENSORLG00000000039)	CNNM1 (ENSORLG00000000036)	GOT1 (ENSORLG00000000031)	NKX2-3 (ENSORLG00000024332)	SLC25A28 (ENSORLG00000023276)	ENTPD7 (ENSORLG00000000027)
Cyprinodontiformes	ANCESTRAL SPECIES	18	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Cyprinodontoidei	ANCESTRAL SPECIES	41	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Poeciliinae	ANCESTRAL SPECIES	9	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Poecilia	ANCESTRAL SPECIES	6	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
NAME_6	ANCESTRAL SPECIES	78	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00940000154902	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859
Amazon molly	MODERN SPECIES	608	zgc:77929 (ENSPFOG00000020121)	npepps (ENSPFOG00000012738)	mrpl45 (ENSPFOG00000012935)	ENSPFOG00000012987	socs7 (ENSPFOG00000013037)	sp2 (ENSPFOG00000013068)	ENSPFOG00000013118	ENSPFOG00000024740	mrpl4 (ENSPFOG00000013329)	ENSPFOG00000013332	col9a1a (ENSPFOG00000013368)	ptp4a1 (ENSPFOG00000013584)	lgsn (ENSPFOG00000013604)	ENSPFOG00000024637	myom2a (ENSPFOG00000013639)	hk1 (ENSPFOG00000014096) #22	ZBTB45 (ENSPFOG00000014275)
Sailfin molly	MODERN SPECIES	1585											ENSPLAG00000023431	ptp4a1 (ENSPLAG00000023409)	lgsn (ENSPLAG00000023397)	ENSPLAG00000023353	myom2a (ENSPLAG00000023290)	hk1 (ENSPLAG00000022793) #22	ENSPLAG00000022782
Guppy	MODERN SPECIES	439	ENSPREG00000021801	zgc:77929 (ENSPREG00000021796)	npepps (ENSPREG00000021780)	mrpl45 (ENSPREG00000021754)	ENSPREG00000021735	socs7 (ENSPREG00000021721)	sp2 (ENSPREG00000021712)	ENSPREG00000021685	mrpl4 (ENSPREG00000021621)	ENSPREG00000021582	ENSPREG00000021570	ptp4a1 (ENSPREG00000021559)	lgsn (ENSPREG00000021552)	ENSPREG00000021538	myom2a (ENSPREG00000021506)	hk1 (ENSPREG00000021465) #22	ENSPREG00000021438	dla (ENSPREG00000021420)	ENSPREG00000021405	ARHGAP19 (ENSPREG00000021370)	slit1b (ENSPREG00000021322)	ENSPREG00000021295	ENSPREG00000021280	MORN4 (ENSPREG00000021271)	hoga1 (ENSPREG00000021261)	CNNM1 (ENSPREG00000021245)	GOT1 (ENSPREG00000021211)	ENSPREG00000021187	slc25a28 (ENSPREG00000021174)	ENTPD7 (ENSPREG00000021157)	ENSPREG00000021136
Platyfish	MODERN SPECIES	19	zgc:77929 (ENSXMAG00000020296)	npepps (ENSXMAG00000014198)	mrpl45 (ENSXMAG00000014301)	ENSXMAG00000022613	socs7 (ENSXMAG00000014313)	sp2 (ENSXMAG00000014321)	ENSXMAG00000009446	ENSXMAG00000023544	mrpl4 (ENSXMAG00000030102)	ENSXMAG00000014356	col9a1a (ENSXMAG00000014357)	ptp4a1 (ENSXMAG00000014405)	lgsn (ENSXMAG00000014412)	ENSXMAG00000014414	myom2a (ENSXMAG00000014415)	hk1 (ENSXMAG00000008211) #22	ENSXMAG00000014452	dla (ENSXMAG00000014461)	ENSXMAG00000030012	ENSXMAG00000014472	slit1b (ENSXMAG00000014475)	ENSXMAG00000027531	MORN4 (ENSXMAG00000005648)	hoga1 (ENSXMAG00000005650)	CNNM1 (ENSXMAG00000005657)	GOT1 (ENSXMAG00000005669)	NKX2-3 (ENSXMAG00000022448)	slc25a28 (ENSXMAG00000005681)	ENTPD7 (ENSXMAG00000005683)	ENSXMAG00000021763	atpv0e2 (ENSXMAG00000027815)
NAME_4	ANCESTRAL SPECIES	74	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000180052	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Mummichog	MODERN SPECIES	2270	mrpl21 (ENSFHEG00000003319)	zgc:77929 (ENSFHEG00000000093)	npepps (ENSFHEG00000003285)	mrpl45 (ENSFHEG00000003230)	ENSFHEG00000003212	socs7 (ENSFHEG00000003189)	sp2 (ENSFHEG00000003176)	ENSFHEG00000003161	mrpl4 (ENSFHEG00000003126)	ENSFHEG00000003112	ENSFHEG00000003088	ptp4a1 (ENSFHEG00000003076)	lgsn (ENSFHEG00000003054)	ENSFHEG00000003030	myom2a (ENSFHEG00000003011)	hk1 (ENSFHEG00000002913) #22	ENSFHEG00000002870	dla (ENSFHEG00000002839)	ENSFHEG00000002822	ARHGAP19 (ENSFHEG00000002810)	slit1b (ENSFHEG00000002796)	ENSFHEG00000002734	ENSFHEG00000002691	ENSFHEG00000002684	hoga1 (ENSFHEG00000002680)	CNNM1 (ENSFHEG00000002668)	GOT1 (ENSFHEG00000002621)	ENSFHEG00000002607	slc25a28 (ENSFHEG00000002603)	ENTPD7 (ENSFHEG00000002586)	ENSFHEG00000002561
Sheepshead minnow	MODERN SPECIES	909										ENSCVAG00000021123	col9a1a (ENSCVAG00000021135)	ptp4a1 (ENSCVAG00000021163)	lgsn (ENSCVAG00000021182)	ENSCVAG00000021184	myom2a (ENSCVAG00000021355)	hk1 (ENSCVAG00000021492) #22	ENSCVAG00000021507	dla (ENSCVAG00000021554)	RHOU (ENSCVAG00000021561)	ENSCVAG00000021586
Aplocheiloidei	ANCESTRAL SPECIES	81	ENSGT00940000155557.jc.b	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512	ENSGT00390000008848	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00940000180052	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Mangrove rivulus	MODERN SPECIES	168	rhbdl3 (ENSKMAG00000013213)	RHOT1 (ENSKMAG00000013102)	ENSKMAG00000013053	tefm (ENSKMAG00000013028)	ENSKMAG00000013011	socs7 (ENSKMAG00000012966)	sp2 (ENSKMAG00000012908)	ENSKMAG00000012832	ENSKMAG00000012788	mrpl4 (ENSKMAG00000012769)	ENSKMAG00000012724	ptp4a1 (ENSKMAG00000012677)	lgsn (ENSKMAG00000012662)	ENSKMAG00000012648	myom2a (ENSKMAG00000012595)	hk1 (ENSKMAG00000012525) #22	ENSKMAG00000012472	dla (ENSKMAG00000012416)	ENSKMAG00000012396	ARHGAP19 (ENSKMAG00000012374)	ENSKMAG00000012355
Turquoise killifish	MODERN SPECIES	1617					ENSNFUG00015004505	ENSNFUG00015004508	ENSNFUG00015004514	SPCS3 (ENSNFUG00015004521)	ENSNFUG00015004537	stx3a (ENSNFUG00015004564)	TMEM176 (ENSNFUG00015004576)	PTP4A1 (ENSNFUG00015004583)	lgsn (ENSNFUG00015004590)	ENSNFUG00015004602	myom2a (ENSNFUG00015004624)	hk1 (ENSNFUG00015005439) #22	ZBTB45 (ENSNFUG00015009939)	DLA (ENSNFUG00015009959)	ENSNFUG00015009984	slit1b (ENSNFUG00015010091)	ENSNFUG00015010906	ENSNFUG00015010916	ENSNFUG00015010919	ENSNFUG00015010928	hoga1 (ENSNFUG00015010952)	CNNM1 (ENSNFUG00015011166)	GOT1 (ENSNFUG00015011190)	NKX2-3 (ENSNFUG00015011235)	SLC25A28 (ENSNFUG00015011246)	ENSNFUG00015011257	ENTPD7 (ENSNFUG00015011274)
Ovalentaria_B	ANCESTRAL SPECIES	4	ENSGT00390000005535	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512.d	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Cichlidae	ANCESTRAL SPECIES	3	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512.d	ENSGT00390000014512.c	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Pseudocrenilabrinae	ANCESTRAL SPECIES	3	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512.d	ENSGT00390000014512.c	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	33	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00390000014512.d	ENSGT00390000014512.c	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Haplochromini	ANCESTRAL SPECIES	45									ENSGT00390000014512.c	ENSGT00390000008848.q.a	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e.c	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Haplochromini_A	ANCESTRAL SPECIES	50									ENSGT00390000014512.c	ENSGT00390000008848.q.a	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e.c	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000170319	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Haplochromini_B	ANCESTRAL SPECIES	93									ENSGT00390000014512.c	ENSGT00390000008848.q.a	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e.c	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a	ENSGT00940000162476
Zebra mbuna	MODERN SPECIES	312															myom2a (ENSMZEG00005020484)	hk1 (ENSMZEG00005005580) #22	ENSMZEG00005005506	dla (ENSMZEG00005005479)	ENSMZEG00005005466	ARHGAP19 (ENSMZEG00005005457)
Eastern happy	MODERN SPECIES	18	wdr83 (ENSACLG00000010671)	PSPN (ENSACLG00000010694)	gtf3aa (ENSACLG00000010768)	yju2b (ENSACLG00000010787)	c3b.2 (ENSACLG00000010814)	ENSACLG00000010942	ENSACLG00000010964	ENSACLG00000011058	mrpl4 (ENSACLG00000011069)	ENSACLG00000011090	ENSACLG00000011158	ptp4a1 (ENSACLG00000011171)	lgsn (ENSACLG00000011199)	ENSACLG00000011207	myom2a (ENSACLG00000011219)	hk1 (ENSACLG00000011311) #22	ENSACLG00000011491	dla (ENSACLG00000011496)	ENSACLG00000011506	ARHGAP19 (ENSACLG00000011516)	slit1b (ENSACLG00000011523)	ENSACLG00000011857	MORN4 (ENSACLG00000011891)	hoga1 (ENSACLG00000011903)	ENSACLG00000012019	CNNM1 (ENSACLG00000012030)	GOT1 (ENSACLG00000012047)	ENSACLG00000012108	slc25a28 (ENSACLG00000012120)	ENTPD7 (ENSACLG00000012169)	ENSACLG00000012247
P. nyererei	MODERN SPECIES	545										mrpl4 (ENSPNYG00000001736)	ENSPNYG00000001699	ENSPNYG00000001677	ptp4a1 (ENSPNYG00000001652)	lgsn (ENSPNYG00000001618)	myom2a (ENSPNYG00000001345)	hk1 (ENSPNYG00000001261) #22	ENSPNYG00000001220	dla (ENSPNYG00000001178)	ENSPNYG00000001159	ARHGAP19 (ENSPNYG00000001117)	ENSPNYG00000001078	ENSPNYG00000001049	ENSPNYG00000001040	ENSPNYG00000001023	MORN4 (ENSPNYG00000000991)	hoga1 (ENSPNYG00000000964)	CNNM1 (ENSPNYG00000000875)	GOT1 (ENSPNYG00000000824)	ENSPNYG00000023327	slc25a28 (ENSPNYG00000023323)	ENTPD7 (ENSPNYG00000023316)
Burton s mouthbrooder	MODERN SPECIES	546										ENSHBUG00000016126	baxa (ENSHBUG00000016134)	col9a1a (ENSHBUG00000016144)	ptp4a1 (ENSHBUG00000016172)	lgsn (ENSHBUG00000016181)	myom2a (ENSHBUG00000016197)	hk1 (ENSHBUG00000016275) #22	ENSHBUG00000016325	dla (ENSHBUG00000016370)	ENSHBUG00000016386	ARHGAP19 (ENSHBUG00000016400)	slit1b (ENSHBUG00000016427)	ENSHBUG00000016442	MORN4 (ENSHBUG00000016465)	ENSHBUG00000016469	hoga1 (ENSHBUG00000016549)	CNNM1 (ENSHBUG00000001140)	GOT1 (ENSHBUG00000016598)	ENSHBUG00000016604	slc25a28 (ENSHBUG00000016611)	ENTPD7 (ENSHBUG00000001004)	ENSHBUG00000016686
Lyretail cichlid	MODERN SPECIES	443	mrpl21 (ENSNBRG00000004248)	zgc:77929 (ENSNBRG00000004263)	npepps (ENSNBRG00000004278)	mrpl45 (ENSNBRG00000004354)	ENSNBRG00000004376	socs7 (ENSNBRG00000004489)	sp2 (ENSNBRG00000004524)	ENSNBRG00000004583	ENSNBRG00000004758	mrpl4 (ENSNBRG00000004804)	ENSNBRG00000004814	ptp4a1 (ENSNBRG00000004831)	lgsn (ENSNBRG00000004858)	ENSNBRG00000004865	myom2a (ENSNBRG00000004940)	hk1 (ENSNBRG00000005272) #22	ENSNBRG00000005305	dla (ENSNBRG00000005342)	RHOU (ENSNBRG00000005470)	ARHGAP19 (ENSNBRG00000005483)	slit1b (ENSNBRG00000005548)	ENSNBRG00000006539	ENSNBRG00000006555	hoga1 (ENSNBRG00000006578)	CNNM1 (ENSNBRG00000006620)	GOT1 (ENSNBRG00000006678)	NKX2-3 (ENSNBRG00000006711)	slc25a28 (ENSNBRG00000006726)	ENTPD7 (ENSNBRG00000006756)	ENSNBRG00000006788	atpv0e2 (ENSNBRG00000006796)
Nile tilapia	MODERN SPECIES	18	WIPF2 (ENSONIG00000000073)	MRPL21 (ENSONIG00000020699)	zgc:77929 (ENSONIG00000020700)	npepps (ENSONIG00000000102)	mrpl45 (ENSONIG00000000107)	ENSONIG00000000109	socs7 (ENSONIG00000039565)	sp2 (ENSONIG00000000117)	ENSONIG00000000119	mrpl4 (ENSONIG00000034546)	hyls1 (ENSONIG00000000138)	ptp4a1 (ENSONIG00000000156)	lgsn (ENSONIG00000000157)	ENSONIG00000000158	myom2a (ENSONIG00000000159)	hk1 (ENSONIG00000000186) #22	ENSONIG00000036388	ENSONIG00000031890	dla (ENSONIG00000000194)	ENSONIG00000000197	ARHGAP19 (ENSONIG00000032271)	slit1b (ENSONIG00000000202)	ENSONIG00000035807	ENSONIG00000000255	ENSONIG00000037769	MORN4 (ENSONIG00000000257)	hoga1 (ENSONIG00000000262)	ENSONIG00000040013	CNNM1 (ENSONIG00000000264)	GOT1 (ENSONIG00000000268)	ENSONIG00000033805
Midas cichlid	MODERN SPECIES	415	MRPL21 (ENSACIG00000012089)	npepps (ENSACIG00000012041)	mrpl45 (ENSACIG00000011923)	ENSACIG00000011879	socs7 (ENSACIG00000011768)	sp2 (ENSACIG00000011751)	ENSACIG00000011672	ENSACIG00000011622	mrpl4 (ENSACIG00000011523)	ENSACIG00000011487	ENSACIG00000011472	ptp4a1 (ENSACIG00000011462)	lgsn (ENSACIG00000011442)	ENSACIG00000011420	myom2a (ENSACIG00000011162)	hk1 (ENSACIG00000011107) #22	ZBTB45 (ENSACIG00000011093)	dla (ENSACIG00000011078)	ENSACIG00000011058	ENSACIG00000011040	ENSACIG00000011023
Pomacentridae	ANCESTRAL SPECIES	67	ENSGT00390000018879	ENSGT00940000155246	ENSGT00390000012679	ENSGT00940000160776	ENSGT00940000156314.b	ENSGT00940000159590	ENSGT00940000164531	ENSGT00940000154902	ENSGT00390000014512.d	ENSGT00390000008848	ENSGT00940000157935.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Pomacentridae_A	ANCESTRAL SPECIES	151												ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.c	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c	ENSGT00390000007125.a
Amphiprion	ANCESTRAL SPECIES		ENSGT00940000157878	ENSGT00940000154950.y.a.d	ENSGT00940000156171.g	ENSGT00390000017043	ENSGT00490000044733	ENSGT00940000157587.k	ENSGT00940000156801.h	ENSGT00940000158403	ENSGT00940000157297	ENSGT00940000162501	ENSGT01100000263513.a.a.b.b.b.b.a.a.b.b.b.g.a.a.a.a	ENSGT00940000154406	ENSGT00390000013639	ENSGT00940000157889.g.b	ENSGT00940000157057.e	ENSGT00950000182787.A.a #22	ENSGT00940000160859	ENSGT00940000159781.b	ENSGT00940000156644.e.a	ENSGT01010000222294.c.b.b.a.a.a.a.a.b.b.a.b.a.b.a.b	ENSGT00940000157331.b.a	ENSGT00940000157322.b.b	ENSGT00940000162611.a.a.a.c	ENSGT00940000162611.b	ENSGT00730000111173.h	ENSGT00530000063604.A	ENSGT00940000157525.a	ENSGT00950000183082.b.b.a.b	ENSGT00940000157556.a.a	ENSGT00940000157049.d	ENSGT01100000263540.B.c
Orange clownfish	MODERN SPECIES	17	rnf150a (ENSAPEG00000011567)	znf330 (ENSAPEG00000011528)	ENSAPEG00000011489	INPP4B (ENSAPEG00000011366)	gab1 (ENSAPEG00000011280)	USP38 (ENSAPEG00000011231)	smarca5 (ENSAPEG00000011117)	ENSAPEG00000011084	frem3 (ENSAPEG00000010978)	ENSAPEG00000010945	ENSAPEG00000010898	ptp4a1 (ENSAPEG00000010869)	lgsn (ENSAPEG00000010837)	ENSAPEG00000010819	myom2a (ENSAPEG00000010774)	hk1 (ENSAPEG00000010727) #22	ENSAPEG00000010678	dla (ENSAPEG00000010614)	RHOU (ENSAPEG00000010570)	ENSAPEG00000010539	ARHGAP19 (ENSAPEG00000010451)	slit1b (ENSAPEG00000010303)	ENSAPEG00000010271	ENSAPEG00000010248	MORN4 (ENSAPEG00000010232)	hoga1 (ENSAPEG00000010201)	CNNM1 (ENSAPEG00000010118)	GOT1 (ENSAPEG00000010068)	NKX2-3 (ENSAPEG00000010041)	slc25a28 (ENSAPEG00000010021)	ENTPD7 (ENSAPEG00000009967)
Clown anemonefish	MODERN SPECIES	2042															myom2a (ENSAOCG00000003869)	hk1 (ENSAOCG00000003886) #22	ENSAOCG00000003900	dla (ENSAOCG00000003916)	ENSAOCG00000000109	ENSAOCG00000003930	ARHGAP19 (ENSAOCG00000003939)	SLIT1 (ENSAOCG00000003973)
Spiny chromis	MODERN SPECIES	1496												ptp4a1 (ENSAPOG00000022730)	lgsn (ENSAPOG00000022760)	ENSAPOG00000022776	myom2a (ENSAPOG00000022855)	hk1 (ENSAPOG00000022895) #22	ENSAPOG00000022935	dla (ENSAPOG00000022986)	RHOU (ENSAPOG00000023020)
Bicolor damselfish	MODERN SPECIES	588	npepps (ENSSPAG00000010341)	mrpl45 (ENSSPAG00000010323)	ENSSPAG00000010294	socs7 (ENSSPAG00000010228)	sp2 (ENSSPAG00000010203)	ENSSPAG00000010189	ENSSPAG00000010133	mrpl4 (ENSSPAG00000010120)	ENSSPAG00000010092	ENSSPAG00000010086	col9a1a (ENSSPAG00000010054)	ptp4a1 (ENSSPAG00000010025)	lgsn (ENSSPAG00000010008)	ENSSPAG00000010002	myom2a (ENSSPAG00000009941)	hk1 (ENSSPAG00000009905) #22	ZBTB45 (ENSSPAG00000009891)	dla (ENSSPAG00000009866)	ENSSPAG00000009850	ENSSPAG00000009789	ENSSPAG00000009769	SLIT1 (ENSSPAG00000009672)
Pinecone sodierfish	MODERN SPECIES		npepps (ENSMMDG00005020607)	mrpl45 (ENSMMDG00005020551)	ENSMMDG00005020513	socs7 (ENSMMDG00005020502)	sp2 (ENSMMDG00005020497)	fbxo48 (ENSMMDG00005020493)	ENSMMDG00005020486	prokr1a (ENSMMDG00005020482)	ENSMMDG00005019588	mrpl4 (ENSMMDG00005019545)	ENSMMDG00005019536	ptp4a1 (ENSMMDG00005019498)	lgsn (ENSMMDG00005019491)	ENSMMDG00005019488	myom2a (ENSMMDG00005019483)	hk1 (ENSMMDG00005019477) #22	ENSMMDG00005019476	dla (ENSMMDG00005019474)	RHOU (ENSMMDG00005019473)	CCSAP (ENSMMDG00005019471)	ACTA1 (ENSMMDG00005019469)	nup133 (ENSMMDG00005017713)	taf5l (ENSMMDG00005017691)	capn9 (ENSMMDG00005017687)	ENSMMDG00005017685	ltv1 (ENSMMDG00005017677)	ENSMMDG00005017674	ENSMMDG00005017671	ENSMMDG00005017022	ENSMMDG00005012208	pus10 (ENSMMDG00005012020)
Cod	MODERN SPECIES	16	ENSGMOG00000023523	ENSGMOG00000006892	ENSGMOG00000020253	ENSGMOG00000006894	mrpl45 (ENSGMOG00000006920)	ENSGMOG00000035842	socs7 (ENSGMOG00000006953)	sp2 (ENSGMOG00000007030)	ENSGMOG00000007063	mrpl4 (ENSGMOG00000007229)	ENSGMOG00000007236	ptp4a1 (ENSGMOG00000007574)	lgsn (ENSGMOG00000007602)	ENSGMOG00000007616	myom2a (ENSGMOG00000036481)	HK1a (ENSGMOG00000005415) #22	ENSGMOG00000028619	dla (ENSGMOG00000005389)	RHOU (ENSGMOG00000005380)	ENSGMOG00000033926	ACTA1 (ENSGMOG00000028074)	nup133 (ENSGMOG00000032428)	taf5l (ENSGMOG00000005310)	capn9 (ENSGMOG00000005292)	ltv1 (ENSGMOG00000005158)	ENSGMOG00000022819	ENSGMOG00000022728	ENSGMOG00000028727	ENSGMOG00000004973	ENSGMOG00000023954	pus10 (ENSGMOG00000004805)
Protacanthopterygii	ANCESTRAL SPECIES	9	ENSGT00940000155701.D	ENSGT00940000157057.f	ENSGT00640000091563.a	ENSGT00940000159956	ENSGT00510000046988	ENSGT00530000064569.b	ENSGT00510000052164.a	ENSGT00990000204590	ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT00390000013819 #16	ENSGT00940000178989	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8	ENSGT01100000263918	ENSGT00940000159620.b.a	ENSGT00390000002373	ENSGT00940000154076.C.c	ENSGT00940000157519.b.a	ENSGT00940000158348.e.a	ENSGT01030000234641.b.a.a	ENSGT00940000157919.a.a	ENSGT00940000159930
Northern pike	MODERN SPECIES	8	zgc:77929 (ENSELUG00000009979)	npepps (ENSELUG00000010076)	mrpl45 (ENSELUG00000010109)	ENSELUG00000010130	socs7 (ENSELUG00000001426)	sp2 (ENSELUG00000010222)	ENSELUG00000010360	mrpl4 (ENSELUG00000010463)	ENSELUG00000010495	col9a1a (ENSELUG00000010517)	ptp4a1 (ENSELUG00000010545)	lgsn (ENSELUG00000010565)	ENSELUG00000010582	myom2a (ENSELUG00000010735)	ENSELUG00000010795	hk1 (ENSELUG00000010829) #22	ENSELUG00000010847	dla (ENSELUG00000010895)	RHOU (ENSELUG00000001495)	CCSAP (ENSELUG00000010931)	ACTA1 (ENSELUG00000001139)	nup133 (ENSELUG00000010985)	taf5l (ENSELUG00000011004)	capn9 (ENSELUG00000011036)	ltv1 (ENSELUG00000001496)	ENSELUG00000011057	ENSELUG00000029931	si:ch211-214c7.5 (ENSELUG00000011125)	PKN1 (ENSELUG00000011325)	map2k7 (ENSELUG00000011409)	ENSELUG00000011448
Salmoninae	DUPLICATION
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	197			ENSGT00940000157057.f.c	ENSGT00640000091563.a.q	ENSGT00940000159956.c	ENSGT00510000046988.hb	ENSGT00530000064569.b.c	ENSGT00510000052164.a.a	ENSGT00940000155043.d #15	ENSGT00940000156288.b.c	ENSGT00390000013819.l #16	ENSGT00940000178989.c	ENSGT00950000183064.a.b.b.hb #18	ENSGT00390000003100.a #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a.c.a #22	ENSGT00940000155512.r.a #23	ENSGT00940000157973.c #25	ENSGT00940000155595.e #7	ENSGT00940000157720	ENSGT00390000017595.u.a	ENSGT00780000122010 #8	ENSGT00940000159620.b.a.b	ENSGT00390000002373.f	ENSGT00940000157519.b.a.e	ENSGT00940000158348.e.a.d	ENSGT01030000234641.b.a.a.c	ENSGT00940000155737.a.a.a.a	ENSGT00940000157919.a.a.c	ENSGT00940000163380	ENSGT00940000154883.e.a.b
Salmoninae_a	ANCESTRAL SPECIES	16	ENSGT00940000158430.c	ENSGT00940000155701.D.c	ENSGT00940000157057.f.c	ENSGT00640000091563.a.q	ENSGT00940000159956.c	ENSGT00510000046988.hb	ENSGT00530000064569.b.c	ENSGT00510000052164.a.a	ENSGT00940000155043.d #15	ENSGT00940000156288.b.c	ENSGT00390000013819.l #16	ENSGT00940000178989.c	ENSGT00950000183064.a.b.b.hb #18	ENSGT00390000003100.a #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a.c.a #22	ENSGT00940000155512.r.a #23	ENSGT00940000157973.c #25	ENSGT00940000155595.e #7	ENSGT00940000157720	ENSGT00390000017595.u.a	ENSGT00780000122010 #8	ENSGT00940000154322.B	ENSGT00940000159620.b.a.b	ENSGT00390000002373.f	ENSGT00940000157519.b.a.e	ENSGT00940000158348.e.a.d	ENSGT01030000234641.b.a.a.c	ENSGT00940000155737.a.a.a.a	ENSGT00940000157919.a.a.c	ENSGT00940000163380
Salmo	ANCESTRAL SPECIES	23	ENSGT00940000158430.c	ENSGT00940000155701.D.c	ENSGT00940000157057.f.c	ENSGT00640000091563.a.q	ENSGT00940000159956.c	ENSGT00510000046988.hb	ENSGT00530000064569.b.c	ENSGT00510000052164.a.a	ENSGT00940000155043.d #15	ENSGT00940000156288.b.c	ENSGT00390000013819.l #16	ENSGT00940000178989.c	ENSGT00950000183064.a.b.b.hb #18	ENSGT00390000003100.a #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a.c.a #22	ENSGT00940000155512.r.a #23	ENSGT00940000157973.c #25	ENSGT00940000155595.e #7	ENSGT00940000157720.r	ENSGT00390000017595.u.a	ENSGT00780000122010 #8	ENSGT00940000154322.B	ENSGT00940000159620.b.a.b	ENSGT00390000002373.f	ENSGT00940000157519.b.a.e	ENSGT00940000158348.e.a.d	ENSGT01030000234641.b.a.a.c	ENSGT00940000155737.a.a.a.a	ENSGT00940000157919.a.a.c	ENSGT00940000163380
Atlantic salmon	MODERN SPECIES		CSMD1 (ENSSSAG00000122294)	MYOM2 (ENSSSAG00000008716)	rnaset2 (ENSSSAG00000009309)	ENSSSAG00000009841	ENSSSAG00000063847	ENSSSAG00000110610	ENSSSAG00000094244	DDX21 (ENSSSAG00000063913) #15	irf1a (ENSSSAG00000063968)	kifbp (ENSSSAG00000063979) #16	ENSSSAG00000063992	vps26a (ENSSSAG00000063997) #18	ENSSSAG00000101701	supv3l1 (ENSSSAG00000064080) #19	hkdc1 (ENSSSAG00000085856) #21	hk1 (ENSSSAG00000058638) #22	tacr2 (ENSSSAG00000065976) #23	tspan15 (ENSSSAG00000065997) #25	rufy2 (ENSSSAG00000066029) #7	ENSSSAG00000066841	PBLD (ENSSSAG00000098146)	ENSSSAG00000066912 #8	ENSSSAG00000067040	SOCS3 (ENSSSAG00000067044)	ENSSSAG00000067050	cyth1b (ENSSSAG00000067079)	timp2a (ENSSSAG00000085941)	sfxn2 (ENSSSAG00000067172)	arl3b (ENSSSAG00000067235)	trim8b (ENSSSAG00000067244)	ENSSSAG00000102403
River trout	MODERN SPECIES	9	mcph1 (ENSSTUG00000050044)	angpt2a (ENSSTUG00000050048)	CSMD1 (ENSSTUG00000050130)	MYOM2 (ENSSTUG00000050515)	rnaset2 (ENSSTUG00000050612)	ENSSTUG00000050644	mpc1 (ENSSTUG00000051059)	ENSSTUG00000051060	ENSSTUG00000051061	ddx21 (ENSSTUG00000051062) #15	irf1a (ENSSTUG00000051063)	kifbp (ENSSTUG00000051065) #16	ENSSTUG00000051066	vps26a (ENSSTUG00000051067) #18	supv3l1 (ENSSTUG00000051070) #19	hk1 (ENSSTUG00000051081) #22	tacr2 (ENSSTUG00000051090) #23	tspan15 (ENSSTUG00000051091) #25	rufy2 (ENSSTUG00000051092) #7	HNRNPH3 (ENSSTUG00000051093)	PBLD (ENSSTUG00000051094)	DNA2 (ENSSTUG00000051095) #8	ENSSTUG00000051096	SOCS3 (ENSSTUG00000051097)	PGS1 (ENSSTUG00000051098)	cyth1b (ENSSTUG00000051099)	timp2a (ENSSTUG00000051100)	sfxn2 (ENSSTUG00000051101)	arl3b (ENSSTUG00000051102)	trim8b (ENSSTUG00000051103)	ENSSTUG00000051104
Oncorhynchus	ANCESTRAL SPECIES	17	ENSGT00940000158430.c	ENSGT00390000018842.q	ENSGT00940000155701.D.c	ENSGT00940000157057.f.c	ENSGT00640000091563.a.q	ENSGT00940000159956.c	ENSGT00510000046988.hb	ENSGT00530000064569.b.c	ENSGT00510000052164.a.a	ENSGT00940000155043.d #15	ENSGT00940000156288.b.c	ENSGT00390000013819.l #16	ENSGT00940000178989.c	ENSGT00950000183064.a.b.b.hb #18	ENSGT00390000003100.a #19	ENSGT00950000182787.A.a.c.a #22	ENSGT00940000155512.r.a #23	ENSGT00940000157973.c #25	ENSGT00940000155595.e #7	ENSGT00940000157720	ENSGT00390000017595.u.a	ENSGT00780000122010 #8	ENSGT00940000154322.B.e	ENSGT00940000159620.b.a.b	ENSGT00390000002373.f	ENSGT00940000157519.b.a.e	ENSGT00940000158348.e.a.d	ENSGT01030000234641.b.a.a.c	ENSGT00940000155737.a.a.a.a	ENSGT00940000157919.a.a.c	ENSGT00940000163380
Oncorhynchus_a	ANCESTRAL SPECIES	13	ENSGT00940000158430.c	ENSGT00390000018842.q	ENSGT00940000155701.D.c	ENSGT00940000157057.f.c	ENSGT00640000091563.a.q	ENSGT00940000159956.c	ENSGT00510000046988.hb	ENSGT00530000064569.b.c	ENSGT00510000052164.a.a	ENSGT00940000155043.d #15	ENSGT00940000156288.b.c	ENSGT00390000013819.l #16	ENSGT00940000178989.c	ENSGT00950000183064.a.b.b.hb #18	ENSGT00390000003100.a #19	ENSGT00950000182787.A.a.c.a #22	ENSGT00940000155512.r.a #23	ENSGT00940000157973.c #25	ENSGT00940000155595.e #7	ENSGT00940000157720	ENSGT00390000017595.u.a	ENSGT00780000122010 #8	ENSGT00940000154322.B.e	ENSGT00940000159620.b.a.b	ENSGT00390000002373.f	ENSGT00940000157519.b.a.e	ENSGT00940000158348.e.a.d	ENSGT01030000234641.b.a.a.c	ENSGT00940000155737.a.a.a.a	ENSGT00940000157919.a.a.c	ENSGT00940000163380
Chinook salmon	MODERN SPECIES		angpt2a (ENSOTSG00005012729)	CSMD1 (ENSOTSG00005012751)	ENSOTSG00005013197	MYOM2 (ENSOTSG00005013205)	rnaset2 (ENSOTSG00005013258)	ENSOTSG00005013353	mpc1 (ENSOTSG00005031176)	ENSOTSG00005031185	ENSOTSG00005031196	ENSOTSG00005031198	irf1a (ENSOTSG00005031200)	kifbp (ENSOTSG00005031204) #16	ENSOTSG00005031206	vps26a (ENSOTSG00005031207) #18	supv3l1 (ENSOTSG00005031208) #19	hk1 (ENSOTSG00005031448) #22	tacr2 (ENSOTSG00005031869) #23	tspan15 (ENSOTSG00005031872) #25	rufy2 (ENSOTSG00005031892) #7	HNRNPH3 (ENSOTSG00005031913)	PBLD (ENSOTSG00005031915)	DNA2 (ENSOTSG00005031919) #8	ENSOTSG00005031925	SOCS3 (ENSOTSG00005031926)	PGS1 (ENSOTSG00005031927)	cyth1b (ENSOTSG00005031929)	timp2a (ENSOTSG00005032007)	sfxn2 (ENSOTSG00005032008)	arl3b (ENSOTSG00005032015)	trim8b (ENSOTSG00005032016)	ENSOTSG00005032017
Rainbow trout	MODERN SPECIES	15	angpt2a (ENSOMYG00000037462)	CSMD1 (ENSOMYG00000038083)	ENSOMYG00000061170	ENSOMYG00000070452	MYOM2 (ENSOMYG00000038817)	rnaset2 (ENSOMYG00000038954)	ENSOMYG00000039428	MPC1 (ENSOMYG00000040964)	ENSOMYG00000040987	ENSOMYG00000041017	ENSOMYG00000041032 #15	irf1a (ENSOMYG00000041046)	ENSOMYG00000041051	vps26a (ENSOMYG00000041057) #18	supv3l1 (ENSOMYG00000041109) #19	hk1 (ENSOMYG00000041472) #22	tacr2 (ENSOMYG00000076557) #23	tspan15 (ENSOMYG00000045739) #25	rufy2 (ENSOMYG00000045772) #7	ENSOMYG00000045815	PBLD (ENSOMYG00000045843)	ENSOMYG00000045890 #8	ENSOMYG00000045994	SOCS3 (ENSOMYG00000045998)	ENSOMYG00000046002	cyth1b (ENSOMYG00000046061)	timp2a (ENSOMYG00000054070)	sfxn2 (ENSOMYG00000046332)	arl3b (ENSOMYG00000046344)	ENSOMYG00000056800	trim8b (ENSOMYG00000046355)
Salmoninae	ANCESTRAL SPECIES	878																ENSGT00950000182787.A.a.c.b #22	ENSGT00940000155512.r.b #23	ENSGT00940000157973.d #25	ENSGT00940000155595.f #7	ENSGT00940000161979.A.a.a.a.b	ENSGT00940000155108	ENSGT00390000017595.u.b	ENSGT01100000263918
Salmoninae_a	ANCESTRAL SPECIES	38	ENSGT00390000018842.r	ENSGT00940000155701.D.d	ENSGT00940000157057.f.d	ENSGT00640000091563.a.r	ENSGT00940000159956.d	ENSGT00510000046988.ib	ENSGT00530000064569.b.d	ENSGT00510000052164.a.b	ENSGT00990000204590	ENSGT00940000155043.c #15	ENSGT00940000156288.b.d	ENSGT00390000013819.k #16	ENSGT00940000178989.d	ENSGT00950000183064.a.b.b.ib.a #18	ENSGT00390000003100.b #19	ENSGT00950000182787.A.a.c.b #22	ENSGT00940000155512.r.b #23	ENSGT00940000157973.d #25	ENSGT00940000155595.f #7	ENSGT01060000253341	ENSGT00940000161979.A.a.a.a.b	ENSGT00940000155108	ENSGT00390000017595.u.b	ENSGT01100000263918	ENSGT00940000159620.b.a.a	ENSGT00390000002373.e	ENSGT00940000154076.C.c	ENSGT00940000157519.b.a.f	ENSGT00990000210156.B	ENSGT00940000158348.e.a.c	ENSGT01030000234641.b.a.a.d
Salmo	ANCESTRAL SPECIES	38	ENSGT00390000018842.r	ENSGT00940000155701.D.d	ENSGT00940000157057.f.d	ENSGT00640000091563.a.r	ENSGT00940000159956.d	ENSGT00510000046988.ib	ENSGT00530000064569.b.d	ENSGT00510000052164.a.b	ENSGT00990000204590	ENSGT00940000155043.c #15	ENSGT00940000156288.b.d	ENSGT00390000013819.k #16	ENSGT00940000178989.d	ENSGT00950000183064.a.b.b.ib.a #18	ENSGT00390000003100.b #19	ENSGT00950000182787.A.a.c.b #22	ENSGT00940000155512.r.b #23	ENSGT00940000157973.d #25	ENSGT00940000155595.f #7	ENSGT01060000253341	ENSGT00940000161979.A.a.a.a.b	ENSGT00940000155108	ENSGT00940000157720.s	ENSGT00390000017595.u.b	ENSGT01100000263918	ENSGT00940000159620.b.a.a	ENSGT00390000002373.e	ENSGT00940000154076.C.c	ENSGT00940000157519.b.a.f	ENSGT00990000210156.B	ENSGT00940000158348.e.a.c
River trout	MODERN SPECIES	1	CSMD1 (ENSSTUG00000041019)	ENSSTUG00000044249 #18	MYOM2 (ENSSTUG00000044277)	rnaset2 (ENSSTUG00000044769)	ENSSTUG00000044983	mpc1 (ENSSTUG00000048257)	ENSSTUG00000048274	ENSSTUG00000048332	ENSSTUG00000048339	ddx21 (ENSSTUG00000048364) #15	irf1a (ENSSTUG00000048479)	kifbp (ENSSTUG00000048488) #16	ENSSTUG00000048499	vps26a (ENSSTUG00000048522) #18	supv3l1 (ENSSTUG00000048598) #19	hk1 (ENSSTUG00000048673) #22	tacr2 (ENSSTUG00000048775) #23	tspan15 (ENSSTUG00000048778) #25	rufy2 (ENSSTUG00000048796) #7	ENSSTUG00000048858	si:dkey-112g5.16 (ENSSTUG00000048863)	ENSSTUG00000048868	PBLD (ENSSTUG00000048869)	ENSSTUG00000048872	SOCS3 (ENSSTUG00000048880)	PGS1 (ENSSTUG00000048882)	DNAH17 (ENSSTUG00000049051)	cyth1b (ENSSTUG00000050162)	ENSSTUG00000050310	timp2a (ENSSTUG00000050314)	sfxn2 (ENSSTUG00000050319)
Atlantic salmon	MODERN SPECIES	20	CSMD1 (ENSSSAG00000085166)	ENSSSAG00000083216	MYOM2 (ENSSSAG00000010629)	rnaset2 (ENSSSAG00000011705)	ENSSSAG00000015372	MPC1 (ENSSSAG00000056414)	ENSSSAG00000056440	ENSSSAG00000056459	ENSSSAG00000056466	DDX21 (ENSSSAG00000056480) #15	irf1a (ENSSSAG00000113088)	kifbp (ENSSSAG00000098195) #16	ENSSSAG00000057209	VP26A (ENSSSAG00000057226) #18	supv3l1 (ENSSSAG00000057282) #19	hk1 (ENSSSAG00000064365) #22	tacr2 (ENSSSAG00000059908) #23	tspan15 (ENSSSAG00000091705) #25	rufy2 (ENSSSAG00000060019) #7	ENSSSAG00000089644	ENSSSAG00000060703	ENSSSAG00000120095	HNRNPH3 (ENSSSAG00000060904)	PBLD (ENSSSAG00000060961)	ENSSSAG00000105000	SOCS3 (ENSSSAG00000106216)	PGS1 (ENSSSAG00000061040)	DNAH17 (ENSSSAG00000061257)	cyth1b (ENSSSAG00000057661)	ENSSSAG00000064051	timp2a (ENSSSAG00000100687)
Oncorhynchus	ANCESTRAL SPECIES	23	ENSGT00390000018842.r	ENSGT00940000155701.D.d	ENSGT00940000157057.f.d	ENSGT00640000091563.a.r	ENSGT00940000159956.d	ENSGT00510000046988.ib	ENSGT00530000064569.b.d	ENSGT00510000052164.a.b	ENSGT00990000204590	ENSGT00940000155043.c #15	ENSGT00940000156288.b.d	ENSGT00390000013819.k #16	ENSGT00940000178989.d	ENSGT00950000183064.a.b.b.ib.a #18	ENSGT00390000003100.b #19	ENSGT00950000182787.A.a.c.b #22	ENSGT00940000155512.r.b #23	ENSGT00940000157973.d #25	ENSGT00940000155595.f #7	ENSGT01060000253341	ENSGT01100000263520.a.b.b.b.b.b	ENSGT00940000155108	ENSGT00390000017595.u.b	ENSGT01100000263918	ENSGT00940000159620.b.a.a	ENSGT00390000002373.e	ENSGT00940000154076.C.c	ENSGT00940000157519.b.a.f	ENSGT00990000210156.B	ENSGT00940000158348.e.a.c	ENSGT01030000234641.b.a.a.d
Oncorhynchus_a	ANCESTRAL SPECIES	18	ENSGT00940000155701.D.d	ENSGT00940000157057.f.d	ENSGT00640000091563.a.r	ENSGT00940000159956.d	ENSGT00510000046988.ib	ENSGT00530000064569.b.d	ENSGT00510000052164.a.b	ENSGT00990000204590	ENSGT00940000155043.c #15	ENSGT00940000156288.b.d	ENSGT00390000013819.k #16	ENSGT00940000178989.d	ENSGT00950000183064.a.b.b.ib.a #18	ENSGT00390000003100.b #19	ENSGT01000000221866	ENSGT00950000182787.A.a.c.b #22	ENSGT00940000155512.r.b #23	ENSGT00940000157973.d #25	ENSGT00940000155595.f #7	ENSGT01060000253341	ENSGT01100000263520.a.b.b.b.b.b	ENSGT00940000155108	ENSGT00390000017595.u.b	ENSGT01100000263918	ENSGT00940000159620.b.a.a	ENSGT00390000002373.e	ENSGT00940000154076.C.c	ENSGT00940000157519.b.a.f	ENSGT00940000158348.e.a.c	ENSGT01030000234641.b.a.a.d	ENSGT00940000155737.a.a.a.b
Chinook salmon	MODERN SPECIES	17	MYOM2 (ENSOTSG00005016133)	rnaset2 (ENSOTSG00005016135)	ENSOTSG00005016156	mpc1 (ENSOTSG00005033362)	ENSOTSG00005033363	ENSOTSG00005033364	ENSOTSG00005033365	ddx21 (ENSOTSG00005033366) #15	irf1a (ENSOTSG00005033972)	kifbp (ENSOTSG00005033974) #16	ENSOTSG00005033975	vps26a (ENSOTSG00005033982) #18	supv3l1 (ENSOTSG00005033985) #19	ENSOTSG00005034659	ENSOTSG00005034660	hk1 (ENSOTSG00005034661) #22	tacr2 (ENSOTSG00005034849) #23	tspan15 (ENSOTSG00005034851) #25	rufy2 (ENSOTSG00005034854) #7	ENSOTSG00005034869	si:dkey-33c12.12 (ENSOTSG00005034870)	ENSOTSG00005034882	ENSOTSG00005034883	TMEM100 (ENSOTSG00005034884)	ENSOTSG00005034885	nploc4 (ENSOTSG00005034898)	pde6gb (ENSOTSG00005035404)	OXLD1 (ENSOTSG00005035407)	gprc5c (ENSOTSG00005035409)	ENSOTSG00005035415	map2k6 (ENSOTSG00005035420)
Coho salmon	MODERN SPECIES	17	ENSOKIG00005050776 #18	MYOM2 (ENSOKIG00005050783)	RNASET2 (ENSOKIG00005050802)	ENSOKIG00005050819	mpc1 (ENSOKIG00005050847)	ENSOKIG00005050848	ENSOKIG00005050849	ENSOKIG00005050851	ddx21 (ENSOKIG00005050856) #15	irf1a (ENSOKIG00005050860)	kifbp (ENSOKIG00005050861) #16	ENSOKIG00005050862	vps26a (ENSOKIG00005050865) #18	supv3l1 (ENSOKIG00005050872) #19	ENSOKIG00005050877	hk1 (ENSOKIG00005050885) #22	tacr2 (ENSOKIG00005050897) #23	tspan15 (ENSOKIG00005050900) #25	rufy2 (ENSOKIG00005050904) #7	ENSOKIG00005050906	ENSOKIG00005050907	si:dkey-33c12.12 (ENSOKIG00005050909)	ENSOKIG00005050911	ENSOKIG00005050913	SOCS3 (ENSOKIG00005006163)	PGS1 (ENSOKIG00005006181)	DNAH17 (ENSOKIG00005006323)	cyth1b (ENSOKIG00005008312)	timp2a (ENSOKIG00005008479)	sfxn2 (ENSOKIG00005008506)	arl3b (ENSOKIG00005008556)
Rainbow trout	MODERN SPECIES	12	ENSOMYG00000055113	MYOM2 (ENSOMYG00000032629)	rnaset2 (ENSOMYG00000032808)	ENSOMYG00000033412	MPC1 (ENSOMYG00000037625)	ENSOMYG00000037693	ENSOMYG00000037709	ENSOMYG00000037714	DDX21 (ENSOMYG00000037885) #15	irf1a (ENSOMYG00000038425)	ENSOMYG00000072307	kifbp (ENSOMYG00000038444) #16	ENSOMYG00000038456	vps26a (ENSOMYG00000038568) #18	supv3l1 (ENSOMYG00000038674) #19	hk1 (ENSOMYG00000039206) #22	tacr2 (ENSOMYG00000040878) #23	tspan15 (ENSOMYG00000040889) #25	rufy2 (ENSOMYG00000040929) #7	ENSOMYG00000070877	ENSOMYG00000040993	ENSOMYG00000041003	ENSOMYG00000041035	ENSOMYG00000041037	ENSOMYG00000064140	SOCS3 (ENSOMYG00000060068)	PGS1 (ENSOMYG00000041060)	DNAH17 (ENSOMYG00000041362)	cyth1b (ENSOMYG00000042374)	ENSOMYG00000043400	timp2a (ENSOMYG00000043403)
Huchen	MODERN SPECIES	2317															ENSHHUG00000042452	hk1 (ENSHHUG00000042466) #22	tacr2 (ENSHHUG00000044534) #23	tspan15 (ENSHHUG00000044540) #25	rufy2 (ENSHHUG00000044558) #7	ENSHHUG00000044586	si:dkey-112g5.16 (ENSHHUG00000044589)	ENSHHUG00000044592	ENSHHUG00000044602
Salmoninae	DUPLICATION
Salmoninae	ANCESTRAL SPECIES	100	ENSGT00940000156314.b.b	ENSGT00940000159590	ENSGT00940000164531.g	ENSGT00940000154902.sb	ENSGT00940000164531.h	ENSGT00390000014512.f.a	ENSGT00390000008848.k	ENSGT00940000157935.a.d	ENSGT00390000014512.f.b	ENSGT00390000008848.l	ENSGT00940000157935.a.c	ENSGT00940000154406	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT00950000182787.A.a.d.a #22	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab	ENSGT00950000182787.A.a.d.b #22	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g	ENSGT00390000003512.r.d	ENSGT00940000156048.e.b.a.b.b	ENSGT00390000011529
Salmoninae_a	ANCESTRAL SPECIES	82	ENSGT00940000164531.g	ENSGT00940000154902.sb	ENSGT00390000014512.f.b	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000159590.o	ENSGT00940000164531.h	ENSGT00390000014512.f.a	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a #22	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00390000011529.i	ENSGT00940000153342.b.gb	ENSGT00940000158966.f	ENSGT00390000002789.j	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h
Salmo	ANCESTRAL SPECIES	89	ENSGT00390000018879.c.a	ENSGT00940000155246.r.a	ENSGT00390000012679.g	ENSGT00940000160776.k	ENSGT00940000156314.b.a	ENSGT00940000159590.o	ENSGT00940000164531.h	ENSGT00390000014512.f.a	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a #22	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00390000011529.i	ENSGT00940000153342.b.gb	ENSGT00940000158966.f	ENSGT00390000002789.j	ENSGT00980000199991	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.k.a	ENSGT00940000158914.b	ENSGT00390000017614.e.a.a.b.b
River trout	MODERN SPECIES	31	zgc:77929 (ENSSTUG00000050991)	npepps (ENSSTUG00000050988)	mrpl45 (ENSSTUG00000050986)	ENSSTUG00000050984	socs7 (ENSSTUG00000050983)	sp2 (ENSSTUG00000050982)	ENSSTUG00000050952	mrpl4 (ENSSTUG00000050945)	ENSSTUG00000050944	col9a1a (ENSSTUG00000050943)	ptp4a1 (ENSSTUG00000050940)	lgsn (ENSSTUG00000050939)	ENSSTUG00000050938	myom2a (ENSSTUG00000050872)	ENSSTUG00000050862	ENSSTUG00000050824 #22	ENSSTUG00000050819	dla (ENSSTUG00000050813)	RHOU (ENSSTUG00000050811)	CCSAP (ENSSTUG00000050810)	ACTA1 (ENSSTUG00000050809)	nup133 (ENSSTUG00000050770)	taf5l (ENSSTUG00000050744)	capn9 (ENSSTUG00000050685)	ENSSTUG00000050678	ltv1 (ENSSTUG00000050676)	ENSSTUG00000050674	si:ch211-214c7.5 (ENSSTUG00000050671)	PKN1 (ENSSTUG00000049633)	map2k7 (ENSSTUG00000049495)	ENSSTUG00000049480
Atlantic salmon	MODERN SPECIES	11	ENSSSAG00000056633	mrpl45 (ENSSSAG00000056972)	ENSSSAG00000056993	socs7 (ENSSSAG00000057003)	sp2 (ENSSSAG00000057013)	ENSSSAG00000057074	mrpl4 (ENSSSAG00000015794)	ENSSSAG00000114921	ENSSSAG00000097975	col9a1a (ENSSSAG00000086280)	TP4A1 (ENSSSAG00000090305)	lgsn (ENSSSAG00000057433)	ENSSSAG00000084744	myom2a (ENSSSAG00000103289)	ENSSSAG00000098659	ENSSSAG00000060153 #22	ENSSSAG00000061984	dla (ENSSSAG00000062006)	RHOU (ENSSSAG00000062117)	ENSSSAG00000091165	ACTA1 (ENSSSAG00000062181)	nup133 (ENSSSAG00000062572)	taf5l (ENSSSAG00000083268)	capn9 (ENSSSAG00000112435)	ltv1 (ENSSSAG00000064974)	ENSSSAG00000064981	ifngr1a (ENSSSAG00000064985)	si:ch211-214c7.5 (ENSSSAG00000064989)	ENSSSAG00000065025	map2k7 (ENSSSAG00000117266)	ENSSSAG00000004204
Oncorhynchus	ANCESTRAL SPECIES	42	ENSGT00390000018879.c.a	ENSGT00940000155246.r.a	ENSGT00390000012679.g	ENSGT00940000160776.k	ENSGT00940000156314.b.a	ENSGT00940000159590.o	ENSGT00940000164531.h	ENSGT00390000014512.f.a	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c.b	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a #22	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00390000011529.i	ENSGT00940000153342.b.gb	ENSGT00940000158966.f	ENSGT00390000002789.j	ENSGT00980000199991	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.b
Oncorhynchus_a	ANCESTRAL SPECIES	38	ENSGT00390000018879.c.a	ENSGT00940000155246.r.a	ENSGT00390000012679.g	ENSGT00940000160776.k	ENSGT00940000156314.b.a	ENSGT00940000159590.o	ENSGT00940000164531.h	ENSGT00390000014512.f.a	ENSGT00390000008848.k.b	ENSGT00940000157935.a.c	ENSGT00940000154406.c.b	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT01030000234599.a.a.ab.b	ENSGT00950000182787.A.a.d.a #22	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00390000011529.i	ENSGT00940000153342.b.gb	ENSGT00940000158966.f	ENSGT00390000002789.j	ENSGT00980000199991	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.b
Chinook salmon	DUPLICATION
Chinook salmon	MODERN SPECIES	2905	ENSOTSG00005037478	ENSOTSG00005037480	map2k7 (ENSOTSG00005037481)	si:ch211-214c7.5 (ENSOTSG00005037695)	ENSOTSG00005037696	nup133 (ENSOTSG00005037698)	taf5l (ENSOTSG00005039678)	capn9 (ENSOTSG00005039702)	ltv1 (ENSOTSG00005041591)	ENSOTSG00005041596	ENSOTSG00005041598	ACTA1 (ENSOTSG00005041599)	RHOU (ENSOTSG00005041605)	myom2a (ENSOTSG00005041633)	ENSOTSG00005042465	ENSOTSG00005042508 #22	ENSOTSG00005045525	dla (ENSOTSG00005045526)	lgsn (ENSOTSG00005045527)	ENSOTSG00005045529	ENSOTSG00005045532	ptp4a1 (ENSOTSG00005045536)	mrpl4 (ENSOTSG00005045544)	ENSOTSG00005045545	ENSOTSG00005039496	ENSOTSG00005039525	ENSOTSG00005039528	sp2 (ENSOTSG00005039530)	ENSOTSG00005039533	ENSOTSG00005039540	mrpl45 (ENSOTSG00005039541)
Chinook salmon	MODERN SPECIES	2905	ENSOTSG00005037463	ENSOTSG00005037458	map2k7 (ENSOTSG00005037451)	si:ch211-214c7.5 (ENSOTSG00005037447)	ENSOTSG00005037446	nup133 (ENSOTSG00005036977)	taf5l (ENSOTSG00005036972)	capn9 (ENSOTSG00005035114)	ENSOTSG00005035110	ltv1 (ENSOTSG00005035109)	ENSOTSG00005035106	ACTA1 (ENSOTSG00005035093)	ENSOTSG00005035090	myom2a (ENSOTSG00005034874)	ENSOTSG00005034872	ENSOTSG00005024998 #22	ENSOTSG00005024959	dla (ENSOTSG00005024937)	lgsn (ENSOTSG00005024934)	ENSOTSG00005024933	ENSOTSG00005024932	ptp4a1 (ENSOTSG00005024925)	mrpl4 (ENSOTSG00005024918)	ENSOTSG00005024915	ENSOTSG00005024911	ENSOTSG00005024910	ENSOTSG00005024898	sp2 (ENSOTSG00005024897)	socs7 (ENSOTSG00005024885)	ENSOTSG00005024880	mrpl45 (ENSOTSG00005024867)
Coho salmon	MODERN SPECIES	12	C6orf120 (ENSOKIG00005005987)	npepps (ENSOKIG00005006067)	mrpl45 (ENSOKIG00005006519)	ENSOKIG00005006538	socs7 (ENSOKIG00005006647)	sp2 (ENSOKIG00005006698)	ENSOKIG00005006774	mrpl4 (ENSOKIG00005007886)	ENSOKIG00005007930	ENSOKIG00005007951	ptp4a1 (ENSOKIG00005007984)	lgsn (ENSOKIG00005008016)	ENSOKIG00005008026	myom2a (ENSOKIG00005008197)	ENSOKIG00005010677	ENSOKIG00005010859 #22	ENSOKIG00005015709	dla (ENSOKIG00005015721)	RHOU (ENSOKIG00005015802)	CCSAP (ENSOKIG00005015809)	ACTA1 (ENSOKIG00005015821)	nup133 (ENSOKIG00005015893)	taf5l (ENSOKIG00005016639)	capn9 (ENSOKIG00005016690)	ltv1 (ENSOKIG00005017663)	ENSOKIG00005017706	ENSOKIG00005017725	si:ch211-214c7.5 (ENSOKIG00005017754)	PKN1 (ENSOKIG00005017942)	map2k7 (ENSOKIG00005022671)	ENSOKIG00005023105
Rainbow trout	MODERN SPECIES	4	ENSOMYG00000041331	ENSOMYG00000041313	mrpl45 (ENSOMYG00000041302)	ENSOMYG00000041297	socs7 (ENSOMYG00000041290)	sp2 (ENSOMYG00000041284)	ENSOMYG00000041250	mrpl4 (ENSOMYG00000041213)	ENSOMYG00000041204	col9a1a (ENSOMYG00000041196)	ptp4a1 (ENSOMYG00000041184)	lgsn (ENSOMYG00000041171)	ENSOMYG00000073173	myom2a (ENSOMYG00000040595)	ENSOMYG00000040188	ENSOMYG00000037304 #22	ENSOMYG00000037025	ENSOMYG00000037014	CCSAP (ENSOMYG00000036990)	ENSOMYG00000036974	nup133 (ENSOMYG00000036921)	taf5l (ENSOMYG00000036888)	capn9 (ENSOMYG00000035711)	ENSOMYG00000035511	ltv1 (ENSOMYG00000035505)	ENSOMYG00000055970	ENSOMYG00000035497	si:ch211-214c7.5 (ENSOMYG00000035470)	ENSOMYG00000035430	map2k7 (ENSOMYG00000035391)	ENSOMYG00000035342
Huchen	MODERN SPECIES	711	zgc:77929 (ENSHHUG00000052858)	npepps (ENSHHUG00000052830)	mrpl45 (ENSHHUG00000052829)	ENSHHUG00000052828	socs7 (ENSHHUG00000052825)	sp2 (ENSHHUG00000052824)	ENSHHUG00000052823	ENSHHUG00000052822	mrpl4 (ENSHHUG00000052821)	ENSHHUG00000052820	ENSHHUG00000052819	ptp4a1 (ENSHHUG00000052818)	lgsn (ENSHHUG00000052817)	ENSHHUG00000052816	myom2a (ENSHHUG00000052814)	ENSHHUG00000052653 #22	ENSHHUG00000052646	dla (ENSHHUG00000052630)	RHOU (ENSHHUG00000052629)	CCSAP (ENSHHUG00000052628)	ACTA1 (ENSHHUG00000052533)	nup133 (ENSHHUG00000052521)	taf5l (ENSHHUG00000052519)	capn9 (ENSHHUG00000052385)	ltv1 (ENSHHUG00000052380)	ENSHHUG00000052379	si:ch211-214c7.5 (ENSHHUG00000052375)	PKN1 (ENSHHUG00000052328)	map2k7 (ENSHHUG00000052320)	ENSHHUG00000052319	ENSHHUG00000052318
Salmoninae	ANCESTRAL SPECIES	100	ENSGT00390000008848.l	ENSGT00940000157935.a.c	ENSGT00940000154406	ENSGT00390000013639.c	ENSGT00940000157889.g.b.a	ENSGT00940000157057.e.g	ENSGT00950000182787.A.a.d.a #22	ENSGT00940000160859.a	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab	ENSGT00950000182787.A.a.d.b #22	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g	ENSGT00390000003512.r.d	ENSGT00940000156048.e.b.a.b.b	ENSGT00390000011529	ENSGT00940000153342.b.gb	ENSGT00940000158966.f	ENSGT00390000002789.j	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00940000158914.b	ENSGT00390000017614.e.a.a.b.a	ENSGT00390000017614.e.a.b
Salmoninae_a	ANCESTRAL SPECIES	82	ENSGT00940000159781.b.f	ENSGT00940000156644.e.a.h	ENSGT00390000003512.r.c	ENSGT00940000156048.e.b.a.b.a	ENSGT00390000011529.i	ENSGT00940000153342.b.gb	ENSGT00940000158966.f	ENSGT00390000002789.j	ENSGT00990000204616.a	ENSGT00390000009916.d	ENSGT00940000154990.fb.a.l	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b #22	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g	ENSGT00390000003512.r.d	ENSGT00940000156048.e.b.a.b.b	ENSGT00390000011529.j	ENSGT00940000153342.b.fb	ENSGT00940000158966.e	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b.c
Oncorhynchus	ANCESTRAL SPECIES	1	ENSGT00390000018879.c.b	ENSGT00940000155246.r.b	ENSGT00390000012679.h	ENSGT00940000160776.l	ENSGT00940000156314.b.b	ENSGT00940000159590.p	ENSGT00940000164531.g	ENSGT00390000014512.f.b	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000154406.c.a	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b #22	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g	ENSGT00390000003512.r.d	ENSGT00940000156048.e.b.a.b.b	ENSGT00390000011529.j	ENSGT00940000153342.b.fb	ENSGT00940000158966.e	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT01010000229885	ENSGT00940000156166.b.a.b.a
Oncorhynchus_a	ANCESTRAL SPECIES	51	ENSGT00390000018879.c.b	ENSGT00940000155246.r.b	ENSGT00390000012679.h	ENSGT00940000160776.l	ENSGT00940000156314.b.b	ENSGT00940000159590.p	ENSGT00940000164531.g	ENSGT00390000014512.f.b	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000154406.c.a	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b #22	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g	ENSGT00390000003512.r.d	ENSGT00940000156048.e.b.a.b.b	ENSGT00390000011529.j	ENSGT00940000153342.b.fb	ENSGT00940000158966.e	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT01010000229885	ENSGT00940000156166.b.a.b.a
Coho salmon	MODERN SPECIES		ENSOKIG00005004496	zgc:77929 (ENSOKIG00005004506)	NPEPPS (ENSOKIG00005004571)	mrpl45 (ENSOKIG00005004732)	ENSOKIG00005004769	socs7 (ENSOKIG00005004783)	sp2 (ENSOKIG00005004874)	ENSOKIG00005004976	mrpl4 (ENSOKIG00005006639)	ENSOKIG00005006745	col9a1a (ENSOKIG00005006782)	ptp4a1 (ENSOKIG00005006799)	lgsn (ENSOKIG00005006846)	myom2a (ENSOKIG00005006977)	ENSOKIG00005009346	ENSOKIG00005009582 #22	ENSOKIG00005016047	dla (ENSOKIG00005016056)	RHOU (ENSOKIG00005016090)	CCSAP (ENSOKIG00005000018)	ACTA1 (ENSOKIG00005000036)	nup133 (ENSOKIG00005000208)	taf5l (ENSOKIG00005000299)	capn9 (ENSOKIG00005000409)	ltv1 (ENSOKIG00005000517)	ENSOKIG00005000530	si:ch211-214c7.5 (ENSOKIG00005000539)	PKN1 (ENSOKIG00005000834)	map2k7 (ENSOKIG00005001518)	ENSOKIG00005001554	ENSOKIG00005001558
Chinook salmon	MODERN SPECIES	4	zgc:77929 (ENSOTSG00005029596)	npepps (ENSOTSG00005029613)	mrpl45 (ENSOTSG00005031642)	ENSOTSG00005031643	socs7 (ENSOTSG00005031644)	sp2 (ENSOTSG00005031645)	ENSOTSG00005031653	mrpl4 (ENSOTSG00005033199)	ENSOTSG00005033200	col9a1a (ENSOTSG00005033201)	ptp4a1 (ENSOTSG00005033203)	lgsn (ENSOTSG00005033204)	ENSOTSG00005033205	myom2a (ENSOTSG00005033220)	ENSOTSG00005035104	ENSOTSG00005035141 #22	ENSOTSG00005045051	dla (ENSOTSG00005045053)	RHOU (ENSOTSG00005045072)	CCSAP (ENSOTSG00005045073)	ACTA1 (ENSOTSG00005045074)	nup133 (ENSOTSG00005045080)	taf5l (ENSOTSG00005045114)	capn9 (ENSOTSG00005045125)	ltv1 (ENSOTSG00005045563)	ENSOTSG00005045566	si:ch211-214c7.5 (ENSOTSG00005045569)	PKN1 (ENSOTSG00005045577)	map2k7 (ENSOTSG00005046822)	ENSOTSG00005046823	ENSOTSG00005046824
Rainbow trout	MODERN SPECIES	8	cdc6 (ENSOMYG00000017817)	ENSOMYG00000017801	ENSOMYG00000017792	mrpl45 (ENSOMYG00000017431)	ENSOMYG00000017375	socs7 (ENSOMYG00000017240)	ENSOMYG00000017585	sp2 (ENSOMYG00000017220)	ENSOMYG00000016019	mrpl4 (ENSOMYG00000015911)	ENSOMYG00000069225	ENSOMYG00000015867	col9a1a (ENSOMYG00000015824)	ptp4a1 (ENSOMYG00000015817)	myom2a (ENSOMYG00000012269)	ENSOMYG00000011175 #22	ENSOMYG00000011021	dla (ENSOMYG00000011005)	RHOU (ENSOMYG00000010995)	CCSAP (ENSOMYG00000010980)	ACTA1 (ENSOMYG00000030567)	nup133 (ENSOMYG00000010021)	taf5l (ENSOMYG00000009508)	capn9 (ENSOMYG00000008726)	ltv1 (ENSOMYG00000008075)	ENSOMYG00000008034	ENSOMYG00000051508	si:ch211-214c7.5 (ENSOMYG00000007848)	ENSOMYG00000074997	ENSOMYG00000007032	map2k7 (ENSOMYG00000005818)
Salmo	ANCESTRAL SPECIES	37	ENSGT00390000012679.h	ENSGT00940000160776.l	ENSGT00940000156314.b.b	ENSGT00940000159590.p	ENSGT00940000164531.g	ENSGT00940000154902.sb	ENSGT00390000014512.f.b	ENSGT00390000008848.l	ENSGT00390000008848.k.a	ENSGT00940000157935.a.d	ENSGT00940000154406.d	ENSGT00390000013639.d	ENSGT00940000157889.g.b.b	ENSGT00940000157057.e.h	ENSGT01030000234599.a.a.ab.a	ENSGT00950000182787.A.a.d.b #22	ENSGT00940000160859.b	ENSGT00940000159781.b.e	ENSGT00940000156644.e.a.g	ENSGT00390000003512.r.d	ENSGT00940000156048.e.b.a.b.b	ENSGT00390000011529.j	ENSGT00940000153342.b.fb	ENSGT00940000158966.e	ENSGT00390000002789.i	ENSGT00990000204616.b	ENSGT00390000009916.c	ENSGT00940000154990.fb.a.k.b	ENSGT00940000158914.a	ENSGT00940000156166.b.a.b.a	ENSGT00940000153846.a.b.c
River trout	MODERN SPECIES	5	cdc6 (ENSSTUG00000004368)	WIPF2 (ENSSTUG00000004401)	zgc:77929 (ENSSTUG00000004405)	npepps (ENSSTUG00000004460)	mrpl45 (ENSSTUG00000005565)	ENSSTUG00000005583	socs7 (ENSSTUG00000005694)	sp2 (ENSSTUG00000005798)	ENSSTUG00000005841	ENSSTUG00000007117	ENSSTUG00000007129	col9a1a (ENSSTUG00000007144)	ptp4a1 (ENSSTUG00000007168)	lgsn (ENSSTUG00000007181)	myom2a (ENSSTUG00000007222)	ENSSTUG00000007759 #22	ENSSTUG00000011765	dla (ENSSTUG00000011770)	RHOU (ENSSTUG00000011777)	CCSAP (ENSSTUG00000011782)	ACTA1 (ENSSTUG00000011784)	nup133 (ENSSTUG00000011820)	taf5l (ENSSTUG00000012578)	capn9 (ENSSTUG00000012615)	ltv1 (ENSSTUG00000013229)	ENSSTUG00000013246	si:ch211-214c7.5 (ENSSTUG00000013260)	PKN1 (ENSSTUG00000013332)	map2k7 (ENSSTUG00000014327)	ENSSTUG00000014478	EVI5L (ENSSTUG00000014499)
Atlantic salmon	MODERN SPECIES	3	mrpl45 (ENSSSAG00000040904)	ENSSSAG00000092308	socs7 (ENSSSAG00000040368)	sp2 (ENSSSAG00000040293)	ENSSSAG00000016022	ENSSSAG00000081786	ENSSSAG00000093318	RM04 (ENSSSAG00000057361)	ENSSSAG00000101448	col9a1a (ENSSSAG00000015756)	tp4a1 (ENSSSAG00000015747)	lgsn (ENSSSAG00000015736)	ENSSSAG00000103185	ENSSSAG00000120680	ENSSSAG00000094621	ENSSSAG00000007744 #22	myom2a (ENSSSAG00000119139)	ENSSSAG00000083618	dla (ENSSSAG00000007717)	RHOU (ENSSSAG00000007710)	CCSAP (ENSSSAG00000007704)	ACTA1 (ENSSSAG00000007690)	nup133 (ENSSSAG00000006278)	ENSSSAG00000089284	ltv1l (ENSSSAG00000005700)	ifngr1b (ENSSSAG00000005697)	ENSSSAG00000109745	si:ch211-214c7.5 (ENSSSAG00000005693)	ENSSSAG00000004995	map2k7 (ENSSSAG00000004417)	ENSSSAG00000098757
Huchen	MODERN SPECIES	237	ENSHHUG00000036838	socs7 (ENSHHUG00000036867)	sp2 (ENSHHUG00000036889)	ENSHHUG00000036899	ENSHHUG00000037092	mrpl4 (ENSHHUG00000037125)	ENSHHUG00000037168	ENSHHUG00000037176	ENSHHUG00000037212	ptp4a1 (ENSHHUG00000037221)	lgsn (ENSHHUG00000037257)	ENSHHUG00000037270	myom2a (ENSHHUG00000037276)	ENSHHUG00000037423	ENSHHUG00000037427	ENSHHUG00000037465 #22	ENSHHUG00000038924	dla (ENSHHUG00000038935)	RHOU (ENSHHUG00000038957)	CCSAP (ENSHHUG00000038963)	ACTA1 (ENSHHUG00000038970)	nup133 (ENSHHUG00000039439)	taf5l (ENSHHUG00000039452)	capn9 (ENSHHUG00000039464)	ltv1 (ENSHHUG00000039717)	ENSHHUG00000039760	ENSHHUG00000039769	si:ch211-214c7.5 (ENSHHUG00000039773)	PKN1 (ENSHHUG00000039787)	map2k7 (ENSHHUG00000039957)	ENSHHUG00000039987
Otomorpha	ANCESTRAL SPECIES	169	ENSGT01050000244968.d	ENSGT00940000158499	ENSGT00390000001491.b	ENSGT00390000007221.a.b	ENSGT00390000000046	ENSGT00940000163077	ENSGT00940000155525	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8
Otophysi	ANCESTRAL SPECIES	25	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8
Characiphysae	ANCESTRAL SPECIES	9	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000013819 #16	ENSGT00940000178989	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00650000094737	ENSGT00940000155061.a.b.k.a.o	ENSGT00940000164992	ENSGT00390000003133.v	ENSGT00390000003133.u.a	ENSGT00390000000854.c.b	ENSGT00950000183175.A.c	ENSGT01030000234633.C.a.c	ENSGT00940000154877.B	ENSGT01100000263502.B.a.a.d.a.a	ENSGT00940000155571.A
Characiphysae_b	ANCESTRAL SPECIES	29	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000013819 #16	ENSGT00940000178989	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00940000155061.a.b.k.a.p	ENSGT00940000155061.a.b.k.a.o	ENSGT00940000164992	ENSGT00390000003133.v	ENSGT00390000003133.u.a	ENSGT00390000000854.c.b	ENSGT00950000183175.A.c	ENSGT01030000234633.C.a.c	ENSGT00940000154877.B	ENSGT01100000263502.B.a.a.d.a.a	ENSGT00940000155571.A
Characoidei	ANCESTRAL SPECIES	19	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000161124	ENSGT00390000009790	ENSGT00940000157134	ENSGT00950000183045.A.a.b	ENSGT00940000158658	ENSGT00940000176198	ENSGT00390000008787.b	ENSGT00390000013819 #16	ENSGT00940000178989	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00940000155061.a.b.k.a.p	ENSGT00940000155061.a.b.k.a.o	ENSGT00940000164992	ENSGT00390000003133.v	ENSGT00390000000854.c.b	ENSGT00950000183175.A.c	ENSGT01030000234633.C.a.c	ENSGT00940000154877.B	ENSGT01100000263502.B.a.a.d.a.a	ENSGT00940000155571.A	ENSGT00950000183027.a.b.c.a
Red-bellied piranha	MODERN SPECIES	1187												ENSPNAG00000018782	vps26a (ENSPNAG00000018729) #18	supv3l1 (ENSPNAG00000018698) #19	hkdc1 (ENSPNAG00000018623) #21	hk1 (ENSPNAG00000017525) #22
Mexicana tetra	MODERN SPECIES	17	PCNX2 (ENSAMXG00000009552)	MAP3K21 (ENSAMXG00000009555)	ENSAMXG00000035702	prim2 (ENSAMXG00000009574)	ENSAMXG00000029573	khdrbs2 (ENSAMXG00000009582)	ENSAMXG00000033446	ENSAMXG00000032306	SORBS1 (ENSAMXG00000009594)	ENSAMXG00000009612	kifbp (ENSAMXG00000030218) #16	ENSAMXG00000035697	vps26a (ENSAMXG00000009633) #18	supv3l1 (ENSAMXG00000009658) #19	hkdc1 (ENSAMXG00000009684) #21	hk1 (ENSAMXG00000012670) #22	tacr2 (ENSAMXG00000012832) #23	tspan15 (ENSAMXG00000012878) #25	ENSAMXG00000040500	ENSAMXG00000013039	ENSAMXG00000034368	rufy2 (ENSAMXG00000021356) #7	HNRNPH3 (ENSAMXG00000021323)	ENSAMXG00000021303	nfkb2 (ENSAMXG00000021294)	shld2 (ENSAMXG00000021286)	glud1a (ENSAMXG00000021266)	sncga (ENSAMXG00000042919)	mmrn2a (ENSAMXG00000021258)	bmpr1aa (ENSAMXG00000037653)	ldb3a (ENSAMXG00000036200)
Channel catfish	MODERN SPECIES	22	rgs17 (ENSIPUG00000015188)	ENSIPUG00000015249	MAP3K21 (ENSIPUG00000015306)	Il22ra2 (ENSIPUG00000015345)	prim2 (ENSIPUG00000015394)	khdrbs2 (ENSIPUG00000015437)	ENSIPUG00000015500	ENSIPUG00000015515	ENSIPUG00000015650	pik3ap1 (ENSIPUG00000015664)	kif1bp (ENSIPUG00000015699) #16	srgn (ENSIPUG00000015721)	vps26a (ENSIPUG00000015731) #18	supv3l1 (ENSIPUG00000015765) #19	hkdc1 (ENSIPUG00000015800) #21	hk1 (ENSIPUG00000015851) #22	tacr2 (ENSIPUG00000015896) #23	TSPAN15 (ENSIPUG00000015936) #25	rufy2 (ENSIPUG00000015983) #7	hnrnph3 (ENSIPUG00000016015)	ENSIPUG00000016038	PSD (ENSIPUG00000016051)	nfkb2 (ENSIPUG00000016084)	ENSIPUG00000016128	shld2 (ENSIPUG00000016145)	glud1 (ENSIPUG00000016158)	ENSIPUG00000016213	sncg (ENSIPUG00000016223)	mmrn2 (ENSIPUG00000016233)	bmpr1a (ENSIPUG00000016269)	ldb3 (ENSIPUG00000016414)
Cyprinoidei	ANCESTRAL SPECIES	5	ENSGT00940000158236	ENSGT00940000155393.d	ENSGT00940000157374	ENSGT00940000159629	ENSGT00940000165457.a.a.b	ENSGT00390000009790	ENSGT00940000157134.k	ENSGT00950000183045.A.a.b	ENSGT00940000158658	ENSGT00390000008787.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595.z	ENSGT00780000122010 #8	ENSGT00940000167706	ENSGT00390000017595.y	ENSGT00940000155061.a.b.k.a	ENSGT00940000164992	ENSGT00390000003133	ENSGT00390000000854.c.b	ENSGT00940000181884	ENSGT00950000183175.A.c	ENSGT01030000234633.C.a.c
Cyprininae	DUPLICATION
Cyprininae	ANCESTRAL SPECIES	62													ENSGT00950000183064.a.b.b.fb #18	ENSGT00390000003100.e #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.A.a.e #22	ENSGT00940000155512.g.a #23	ENSGT00940000157973.b #25	ENSGT00940000155595.a #7	ENSGT00940000157720.w.a	ENSGT00390000017595.y.b	ENSGT00390000017595.z	ENSGT00780000122010.a #8	ENSGT00940000167706	ENSGT00940000155061.a.b.k.a.r.b	ENSGT00940000164992.i	ENSGT00390000000854.c.b.b.b	ENSGT00940000181884.b.b	ENSGT00950000183175.A.c.a	ENSGT01030000234633.C.a.c.b	ENSGT00940000156225.l.b
Goldfish	MODERN SPECIES	31	stox1 (ENSCARG00000026473) #12	ENSCARG00000026461	ENSCARG00000026447	ENSCARG00000026433	tlr4bb (ENSCARG00000026423)	zgc:154058 (ENSCARG00000026420)	mat1a (ENSCARG00000025440)	ENSCARG00000025394	selenou1a (ENSCARG00000025375)	sfxn3 (ENSCARG00000025335)	ENSCARG00000025323	pdzd7a (ENSCARG00000025314)	lzts2a (ENSCARG00000025309)	SEMA4G (ENSCARG00000024580)	ENSCARG00000024538	hk1 (ENSCARG00000024100) #22	tacr2 (ENSCARG00000024065) #23	tspan15 (ENSCARG00000024027) #25	GFRA1 (ENSCARG00000023905)	apcs (ENSCARG00000023890)	ATRNL1 (ENSCARG00000023570)	ENSCARG00000023475	ENSCARG00000023470	fam204a (ENSCARG00000023465)	RAB11FIP2 (ENSCARG00000023456)	eif3s10 (ENSCARG00000023366)	dennd10 (ENSCARG00000023306)	sfxn4 (ENSCARG00000023240)	prdx3 (ENSCARG00000023198)	tm9sf3 (ENSCARG00000022629)	ENSCARG00000022582
Cyprininae_a	ANCESTRAL SPECIES	148	ENSGT00940000158236.c	ENSGT00940000155393.d.rd.a	ENSGT00940000157374	ENSGT00940000159629.b.a	ENSGT00940000165457.a.a.b.d.b	ENSGT00390000009790.f	ENSGT00940000157134.k.b	ENSGT00950000183045.A.a.b.g	ENSGT00940000158658.b	ENSGT00390000008787.b.a	ENSGT00390000013819.i #16	ENSGT00390000000885.d #17	ENSGT00950000183064.a.b.b.gb.b #18	ENSGT00390000003100.e #19	ENSGT00950000182787.E.d.e.a ##22	ENSGT00950000182787.A.a.e #22	ENSGT00940000155512.g.a #23	ENSGT00940000157973.b #25	ENSGT00940000155595.a #7	ENSGT00940000157720.w.a	ENSGT00390000017595.y.b	ENSGT00390000017595.z	ENSGT00780000122010.a #8	ENSGT00940000155061.a.b.k.a.r.b	ENSGT00940000164992.i	ENSGT00390000000854.c.b.b.b	ENSGT00940000181884.b.b	ENSGT00950000183175.A.c.a	ENSGT01030000234633.C.a.c.b	ENSGT00940000156225.l.b	ENSGT00940000154877.B.ab
Golden-line barbel	MODERN SPECIES	312	PCNX2 (ENSSGRG00000051670)	ENSSGRG00000051669	il22ra2 (ENSSGRG00000051668)	prim2 (ENSSGRG00000051667)	eif3s6ip (ENSSGRG00000051665)	prim2 (ENSSGRG00000051664)	khdrbs2 (ENSSGRG00000051663)	ENSSGRG00000051661	ENSSGRG00000051660	ENSSGRG00000051659	kifbp (ENSSGRG00000051658) #16	srgn (ENSSGRG00000051657) #17	vps26a (ENSSGRG00000051653) #18	supv3l1 (ENSSGRG00000051651) #19	ENSSGRG00000051650 ##22	hk1 (ENSSGRG00000051007) #22	tacr2 (ENSSGRG00000050996) #23	tspan15 (ENSSGRG00000050995) #25	rufy2 (ENSSGRG00000050730) #7	HNRNPH3 (ENSSGRG00000050721)	pbld (ENSSGRG00000050617)	DNA2 (ENSSGRG00000050610) #8	ENSSGRG00000050607	ENSSGRG00000050606	nfkb2 (ENSSGRG00000050352)	shld2 (ENSSGRG00000050346)	shld2 (ENSSGRG00000050344)	glud1a (ENSSGRG00000049981)	zgc:193505 (ENSSGRG00000049966)	sncga (ENSSGRG00000049965)	bmpr1aa (ENSSGRG00000049956)
Cyprininae	ANCESTRAL SPECIES	126	ENSGT00390000009790.f	ENSGT00940000157134.k.b	ENSGT00950000183045.A.a.b.g	ENSGT00940000158658.b	ENSGT00940000176198	ENSGT00940000158658.a	ENSGT00390000008787.b	ENSGT00390000013819.j #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b.gb.b #18	ENSGT00390000013819.i #16	ENSGT00940000178989	ENSGT00950000183064.a.b.b.gb.a.a #18	ENSGT00390000003100.f #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a.f #22	ENSGT00940000155512.g.b #23	ENSGT00940000157973.a #25	ENSGT00940000155595.b #7	ENSGT00940000157720.w.b	ENSGT00390000017595.y.a	ENSGT00780000122010.b #8	ENSGT00940000155061.a.b.k.a.r.a	ENSGT00940000164992.j	ENSGT00390000003133	ENSGT00390000000854.c.b.b.a	ENSGT00940000181884.b.a.a	ENSGT00950000183175.A.c.b	ENSGT01030000234633.C.a.c.a	ENSGT00940000156225.l.a	ENSGT00940000154877.B.bb.a.a
Cyprininae_a	ANCESTRAL SPECIES	32								ENSGT00940000176198	ENSGT00940000158658.a	ENSGT00390000008787.b.b	ENSGT00390000013819.j #16	ENSGT00390000000885.c #17	ENSGT00950000183064.a.b.b.gb.a.a #18	ENSGT00390000003100.f #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.a.f #22	ENSGT00940000155512.g.b #23	ENSGT00940000157973.a #25	ENSGT00940000155595.b #7	ENSGT00940000157720.w.b	ENSGT00390000017595.y.a	ENSGT00780000122010.b #8	ENSGT00940000167706	ENSGT00940000155061.a.b.k.a.r.a	ENSGT00940000164992.j	ENSGT00390000003133	ENSGT00390000000854.c.b.b.a	ENSGT00940000181884.a	ENSGT00940000181884.b.a.a	ENSGT00950000183175.A.c.b	ENSGT01030000234633.C.a.c.a
Common carp reference	MODERN SPECIES	18	sf3b5 (ENSCCRG00000069139)	oprm1 (ENSCCRG00000007740)	rgs17 (ENSCCRG00000060097)	ENSCCRG00000030547	il22ra2 (ENSCCRG00000030552)	prim2 (ENSCCRG00000020013)	khdrbs2 (ENSCCRG00000028836)	ENSCCRG00000067772	ENSCCRG00000002565	kifbp (ENSCCRG00000060294) #16	ENSCCRG00000057110	srgn (ENSCCRG00000030643) #17	vps26a (ENSCCRG00000076720) #18	supv3l1 (ENSCCRG00000041652) #19	hkdc1 (ENSCCRG00000030894) #21	hk1 (ENSCCRG00000043411) #22	tacr2 (ENSCCRG00000030681) #23	tspan15 (ENSCCRG00000010382) #25	rufy2 (ENSCCRG00000010265) #7	ENSCCRG00000010254	pbld2 (ENSCCRG00000072935)	ENSCCRG00000064576 #8	ENSCCRG00000056474	ENSCCRG00000057933	nfkb2 (ENSCCRG00000006553)	ENSCCRG00000060403	zgc:193505 (ENSCCRG00000053666)	sncga (ENSCCRG00000068745)	mmrn2a (ENSCCRG00000016210)	bmpr1aa (ENSCCRG00000016071)	ldb3a (ENSCCRG00000052934)
Goldfish	MODERN SPECIES	4	CAMKMT (ENSCARG00000017889)	six3a (ENSCARG00000017877)	ENSCARG00000017870	six2a (ENSCARG00000017861)	ENSCARG00000017837	il22ra2 (ENSCARG00000017775)	prim2 (ENSCARG00000017680)	khdrbs2 (ENSCARG00000017655)	ENSCARG00000017632	ENSCARG00000017608	kifbp (ENSCARG00000017599) #16	ENSCARG00000017594	vps26a (ENSCARG00000017477) #18	supv3l1 (ENSCARG00000017396) #19	hkdc1 (ENSCARG00000017374) #21	hk1 (ENSCARG00000012997) #22	tacr2 (ENSCARG00000012878) #23	tspan15 (ENSCARG00000012873) #25	rufy2 (ENSCARG00000012595) #7	HNRNPH3 (ENSCARG00000012568)	pbld2 (ENSCARG00000012538)	PSD (ENSCARG00000012023)	nfkb2 (ENSCARG00000011786)	glud1a (ENSCARG00000011605)	zgc:193505 (ENSCARG00000011593)	sncga (ENSCARG00000011583)	mmrn2a (ENSCARG00000011578)	bmpr1aa (ENSCARG00000011551)	opn4a (ENSCARG00000011534)	ENSCARG00000011528	sncga (ENSCARG00000011522)
Zebrafish	MODERN SPECIES	4	oprm1 (ENSDARG00000039434)	rgs17 (ENSDARG00000039435)	ENSDARG00000055698	MAP3K21 (ENSDARG00000079473)	il22ra2 (ENSDARG00000039439)	prim2 (ENSDARG00000052721)	khdrbs2 (ENSDARG00000069469)	ENSDARG00000002219	ENSDARG00000103435	ENSDARG00000078285	kifbp (ENSDARG00000062053) #16	srgn (ENSDARG00000077069) #17	vps26a (ENSDARG00000056549) #18	supv3l1 (ENSDARG00000077728) #19	hkdc1 (ENSDARG00000038703) #21	hk1 (ENSDARG00000039452) #22	tacr2 (ENSDARG00000074509) #23	tspan15 (ENSDARG00000039455) #25	rufy2 (ENSDARG00000062019) #7	hnrnph3 (ENSDARG00000039466)	pbld2 (ENSDARG00000026359)	pbld (ENSDARG00000016704)	ENSDARG00000078759	ENSDARG00000113096	PSD (ENSDARG00000078102)	nfkb2 (ENSDARG00000038687)	shld2 (ENSDARG00000038686)	glud1a (ENSDARG00000008816)	zgc:193505 (ENSDARG00000093584)	sncga (ENSDARG00000034423)	mmrn2a (ENSDARG00000076135)
Clupeiformes	ANCESTRAL SPECIES	821																ENSGT00950000182787.A.a #22	ENSGT00940000160859.d
Denticle herring	MODERN SPECIES	13	SMARCE1 (ENSDCDG00000004373)	IGFBP4 (ENSDCDG00000004370)	si:dkey-5n18.1 (ENSDCDG00000004362)	ENSDCDG00000004358	ENSDCDG00000004351	ENSDCDG00000004348	PIP4K2B (ENSDCDG00000004217)	psmb3 (ENSDCDG00000004206)	cwc25 (ENSDCDG00000004203)	sp6 (ENSDCDG00000004199)	scrn2 (ENSDCDG00000004197)	PLA2G12B (ENSDCDG00000004183)	ENSDCDG00000004031	QPRT (ENSDCDG00000004020)	ARHGDIA (ENSDCDG00000004015)	hk1 (ENSDCDG00000003903) #22	ENSDCDG00000003886	m17 (ENSDCDG00000003885)	NAA25 (ENSDCDG00000003874)	ENSDCDG00000003871	pitpnb (ENSDCDG00000003830)	ENSDCDG00000003431	pla2g3 (ENSDCDG00000003288)	ptpn11a (ENSDCDG00000002696)	ddx55 (ENSDCDG00000002419)	ENSDCDG00000002399	ENSDCDG00000002397	ENSDCDG00000002393	denr (ENSDCDG00000002390)	ENSDCDG00000002389	HIP1R (ENSDCDG00000002182)
Atlantic herring	DUPLICATION
Atlantic herring	MODERN SPECIES	4	ret (ENSCHAG00000005492)	si:dkey-192p21.6 (ENSCHAG00000005369)	pcbd1 (ENSCHAG00000005326)	sgpl1 (ENSCHAG00000004934)	neurog3 (ENSCHAG00000004895)	pdlim1 (ENSCHAG00000004797)	ENSCHAG00000004774	ENSCHAG00000004511	ENSCHAG00000004451	ENSCHAG00000004430	kifbp (ENSCHAG00000004385) #16	ENSCHAG00000004366	ENSCHAG00000004360	vps26a (ENSCHAG00000003771) #18	supv3l1 (ENSCHAG00000002406) #19	hk1 (ENSCHAG00000024379) #22	tacr2 (ENSCHAG00000024218) #23	ENSCHAG00000024217	tspan15 (ENSCHAG00000024215) #25	DNA2 (ENSCHAG00000024100) #8	pbld (ENSCHAG00000024077)	HNRNPH3 (ENSCHAG00000024048)	ENSCHAG00000024041	CCDC88A (ENSCHAG00000023584)	prorsd1 (ENSCHAG00000023551)	rps27a (ENSCHAG00000023547)	ENSCHAG00000023534	ENSCHAG00000023521	RTN4 (ENSCHAG00000023490)	EML6 (ENSCHAG00000023182)	SPTBN1 (ENSCHAG00000020514)
Atlantic herring	MODERN SPECIES	18	ENSCHAG00000025618	SLC8B1 (ENSCHAG00000025620)	ENSCHAG00000025622	ENSCHAG00000025625	MGAT3 (ENSCHAG00000025626)	TAB1 (ENSCHAG00000025628)	ENSCHAG00000025645	ENSCHAG00000025707	ENSCHAG00000025767	ENSCHAG00000025783	ENSCHAG00000025786	QPRT (ENSCHAG00000025789)	ALYREF (ENSCHAG00000025792)	ARHGDIA (ENSCHAG00000025794)	KCNJ4 (ENSCHAG00000025798)	ENSCHAG00000025804 #22	ENSCHAG00000025939	SLC8B1 (ENSCHAG00000025951)	ENSCHAG00000025989	ENSCHAG00000026061	ENSCHAG00000026065	ENSCHAG00000026071	ENSCHAG00000002679	ENSCHAG00000002784	ENSCHAG00000002815	ENSCHAG00000002909	ENDOV (ENSCHAG00000003061)	NPTX1 (ENSCHAG00000003139)	RPTOR (ENSCHAG00000003256)	ENSCHAG00000004453	p4hb (ENSCHAG00000004484)
Neopterygii	ANCESTRAL SPECIES	72									ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8	ENSGT00520000055589.c #12	ENSGT00530000063672.a #11	ENSGT00940000166680	ENSGT01030000234578.A.b.a.b	ENSGT00940000166192	ENSGT00940000158935 #10	ENSGT00940000157520 #9	ENSGT00940000156111	ENSGT00940000158282
Osteoglossocephalai	ANCESTRAL SPECIES	104									ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8	ENSGT00940000158427	ENSGT00390000018879	ENSGT00940000155172	ENSGT00940000159781.a	ENSGT00530000063168.b	ENSGT00550000075035	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.e.a
Clupeocephala	ANCESTRAL SPECIES	88									ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT00390000013819 #16	ENSGT00390000000885 #17	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512 #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8	ENSGT00940000158427	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00940000155172	ENSGT00550000075035	ENSGT00940000157474	ENSGT00940000156603	ENSGT00940000156644.e.b	ENSGT00940000157464
Euteleosteomorpha	ANCESTRAL SPECIES	17	ENSGT00940000155701.D	ENSGT00940000157057.f	ENSGT00640000091563.a	ENSGT00940000159956	ENSGT00510000046988	ENSGT00530000064569.b	ENSGT00510000052164.a	ENSGT00990000204590	ENSGT00940000155043 #15	ENSGT00940000156288.b	ENSGT00390000013819 #16	ENSGT00940000178989	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000155595 #7	ENSGT00940000157720	ENSGT00390000017595	ENSGT00780000122010 #8
Acanthomorphata	ANCESTRAL SPECIES	18	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E	ENSGT00550000075035
Cod	MODERN SPECIES	5	ENSGMOG00000012317	ENSGMOG00000012328	ENSGMOG00000012331	ENSGMOG00000012337	ENSGMOG00000036663	ENSGMOG00000012354 #15	ENSGMOG00000030849	ENSGMOG00000010414	ENSGMOG00000012375	ENSGMOG00000028340	kifbp (ENSGMOG00000012380) #16	ENSGMOG00000030625	vps26a (ENSGMOG00000012384) #18	supv3l1 (ENSGMOG00000012387) #19	hkdc1 (ENSGMOG00000012392) #21	HK1b (ENSGMOG00000012396) #22	tacr2 (ENSGMOG00000012400) #23	tspan15 (ENSGMOG00000036077) #25	ENSGMOG00000012407 #8	ENSGMOG00000026616	ENSGMOG00000012413	ENSGMOG00000012421	ENSGMOG00000012424	MBL (ENSGMOG00000030363)	ENSGMOG00000012427	ENSGMOG00000012428	ENSGMOG00000012420 #7	ENSGMOG00000012432	ENSGMOG00000012434	ENSGMOG00000012435	ENSGMOG00000012438
Euacanthomorphacea	ANCESTRAL SPECIES	23	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E	ENSGT00550000075035
Pinecone sodierfish	MODERN SPECIES	17	ENSMMDG00005024905	rnaset2 (ENSMMDG00005024904)	MYOM2 (ENSMMDG00005024902)	ENSMMDG00005024901	ENSMMDG00005024900	ENSMMDG00005024899	csmd1a (ENSMMDG00005024897)	ENSMMDG00005024896	ddx21 (ENSMMDG00005024837) #15	mpc1 (ENSMMDG00005024836)	kifbp (ENSMMDG00005024835) #16	ENSMMDG00005024834	vps26a (ENSMMDG00005024833) #18	supv3l1 (ENSMMDG00005024832) #19	hkdc1 (ENSMMDG00005024824) #21	HK1 (ENSMMDG00005024823) #22	tacr2 (ENSMMDG00005024822) #23	tspan15 (ENSMMDG00005024821) #25	ENSMMDG00005024820	ENSMMDG00005024819	ENSMMDG00005024818	dhcr7 (ENSMMDG00005024817)	MMP15 (ENSMMDG00005024816)	slc7a6os (ENSMMDG00005024815)	slc7a6 (ENSMMDG00005024791)	adgrg1 (ENSMMDG00005024790)	SYAP1 (ENSMMDG00005024789)	phospho2 (ENSMMDG00005024788)	CDH8 (ENSMMDG00005024783)	ENSMMDG00005024782	ADAMTS18 (ENSMMDG00005024781)
Percomorphaceae	ANCESTRAL SPECIES	15	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E	ENSGT00550000075035
Tiger tail seahorse	MODERN SPECIES	461	smyd2a (ENSHCOG00000013526)	galnt2 (ENSHCOG00000013561)	ENSHCOG00000013583	ABCB10 (ENSHCOG00000013634)	ACTA1 (ENSHCOG00000013649)	ccsapb (ENSHCOG00000013656)	rab4a (ENSHCOG00000013671)	phf10 (ENSHCOG00000013701)	psmb1 (ENSHCOG00000013729)	ENSHCOG00000013737	mpc1 (ENSHCOG00000013886)	kifbp (ENSHCOG00000013901) #16	ENSHCOG00000013944	vps26a (ENSHCOG00000013958) #18	supv3l1 (ENSHCOG00000013962) #19	HK1 (ENSHCOG00000014007) #22	tacr2 (ENSHCOG00000000400) #23	tspan15 (ENSHCOG00000014291) #25	ENSHCOG00000014299	pbld (ENSHCOG00000014319)	HNRNPH3 (ENSHCOG00000014335)	rufy2 (ENSHCOG00000014361) #7	fam120b (ENSHCOG00000014370)	dld (ENSHCOG00000014394)	ENSHCOG00000014401	ppm1g (ENSHCOG00000014448)	ENSHCOG00000014456	pdcd2 (ENSHCOG00000014463)	tbp (ENSHCOG00000014488)	psmc3 (ENSHCOG00000014492)	ddx21 (ENSHCOG00000014503) #15
Percomorphaceae_B	ANCESTRAL SPECIES	12	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603
Ovalentaria	ANCESTRAL SPECIES	17	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603
Atherinomorphae	ANCESTRAL SPECIES	8	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Cyprinodontiformes	ANCESTRAL SPECIES	9	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Cyprinodontoidei	ANCESTRAL SPECIES	6	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00390000001960	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00650000094290	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
NAME_4	ANCESTRAL SPECIES	53	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00390000001960	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00650000094290	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Mummichog	MODERN SPECIES	2457	SLC38A8 (ENSFHEG00000011796)	nrn1lb (ENSFHEG00000011769)	thap11 (ENSFHEG00000011742)	gfod2 (ENSFHEG00000011734)	ENSFHEG00000011716	cog4 (ENSFHEG00000011657)	gnao1b (ENSFHEG00000011542)	tradd (ENSFHEG00000011509)	ogfod1 (ENSFHEG00000011492)	nudt21 (ENSFHEG00000011485)	CTCF (ENSFHEG00000011460)	vrk3 (ENSFHEG00000011368)	vps26a (ENSFHEG00000011341) #18	supv3l1 (ENSFHEG00000011288) #19	hkdc1 (ENSFHEG00000011237) #21	HK1 (ENSFHEG00000011157) #22	tacr2 (ENSFHEG00000011002) #23	tspan15 (ENSFHEG00000010784) #25	ENSFHEG00000010772 #8	pbld (ENSFHEG00000010762)	HNRNPH3 (ENSFHEG00000010727)	ENSFHEG00000010722	rufy2 (ENSFHEG00000010709) #7	fam120b (ENSFHEG00000010696)	dld (ENSFHEG00000010679)	mis12 (ENSFHEG00000010650)	ppm1g (ENSFHEG00000010645)	ENSFHEG00000010629	pdcd2 (ENSFHEG00000010612)	tbp (ENSFHEG00000000592)	psmc3 (ENSFHEG00000010599)
Sheepshead minnow	MODERN SPECIES	481										rrp15 (ENSCVAG00000009850)	mpc1 (ENSCVAG00000009867)	kifbp (ENSCVAG00000009880) #16	vps26a (ENSCVAG00000009905) #18	supv3l1 (ENSCVAG00000009948) #19	hkdc1 (ENSCVAG00000009987) #21	HK1 (ENSCVAG00000010052) #22	tacr2 (ENSCVAG00000010359) #23	tspan15 (ENSCVAG00000000285) #25	ENSCVAG00000010393	pbld (ENSCVAG00000010432)	HNRNPH3 (ENSCVAG00000010461)	ENSCVAG00000010465	rufy2 (ENSCVAG00000010489) #7	ENSCVAG00000010514	dld (ENSCVAG00000010557)	mis12 (ENSCVAG00000010564)	ppm1g (ENSCVAG00000010572)	ENSCVAG00000000294	pdcd2 (ENSCVAG00000010600)	tbp (ENSCVAG00000010629)	psmc3 (ENSCVAG00000010638)
Poeciliinae	ANCESTRAL SPECIES	13	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00390000001960	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00650000094290	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Poecilia	ANCESTRAL SPECIES	4	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00390000001960	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00650000094290	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
NAME_6	ANCESTRAL SPECIES	5	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00390000001960	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00650000094290	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665.y	ENSGT00390000018665.z	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Sailfin molly	MODERN SPECIES	1723									rrp15 (ENSPLAG00000012226)	mpc1 (ENSPLAG00000012473)	kifbp (ENSPLAG00000012503) #16	ENSPLAG00000012512	vps26a (ENSPLAG00000000287) #18	supv3l1 (ENSPLAG00000012582) #19	hkdc1 (ENSPLAG00000012631) #21	HK1 (ENSPLAG00000012646) #22	tacr2 (ENSPLAG00000012654) #23
Amazon molly	MODERN SPECIES	285	immp1l (ENSPFOG00000016879)	ENSPFOG00000016735	ENSPFOG00000016747	ENSPFOG00000016720	MYOM2 (ENSPFOG00000016548)	CSMD1 (ENSPFOG00000016334)	ENSPFOG00000016305	ddx21 (ENSPFOG00000016196) #15	ENSPFOG00000016123	rrp15 (ENSPFOG00000020596)	mpc1 (ENSPFOG00000016111)	kifbp (ENSPFOG00000016039) #16	vps26a (ENSPFOG00000016032) #18	supv3l1 (ENSPFOG00000015968) #19	hkdc1 (ENSPFOG00000015937) #21	HK1 (ENSPFOG00000015650) #22	tacr2 (ENSPFOG00000015602) #23	tspan15 (ENSPFOG00000015573) #25	ENSPFOG00000015466	ENSPFOG00000015056 #8	pbld (ENSPFOG00000015384)	ENSPFOG00000015322	ENSPFOG00000015314	rufy2 (ENSPFOG00000022040) #7	fam120b (ENSPFOG00000014993)	dld (ENSPFOG00000014941)	mis12 (ENSPFOG00000014933)	mis12 (ENSPFOG00000014930)	ppm1g (ENSPFOG00000014881)	ENSPFOG00000014852	pdcd2 (ENSPFOG00000014811)
Guppy	MODERN SPECIES	455	immp1l (ENSPREG00000013930)	ENSPREG00000014009	rnaset2 (ENSPREG00000014091)	ENSPREG00000014117	CSMD1 (ENSPREG00000014261)	ENSPREG00000014410	ENSPREG00000014468	ENSPREG00000014480	rrp15 (ENSPREG00000014485)	mpc1 (ENSPREG00000014499)	kifbp (ENSPREG00000014599) #16	ENSPREG00000014684	vps26a (ENSPREG00000014691) #18	supv3l1 (ENSPREG00000014702) #19	hkdc1 (ENSPREG00000014828) #21	ENSPREG00000015678 #22	ppfia1 (ENSPREG00000015740)	CTTN (ENSPREG00000015786)	SHANK2 (ENSPREG00000015824)	ENSPREG00000015910	ENSPREG00000016083	guca1g (ENSPREG00000016281)	ENSPREG00000016292	ENSPREG00000016315	ENSPREG00000016326	ENSPREG00000016340	ENSPREG00000016359	ENSPREG00000016373	ENSPREG00000016392	BRSK2 (ENSPREG00000016429)	ENSPREG00000016507
Platyfish	MODERN SPECIES	18	ENSXMAG00000026444	immp1l (ENSXMAG00000014310)	ENSXMAG00000014312	ENSXMAG00000022893	MYOM2 (ENSXMAG00000014385)	CSMD1 (ENSXMAG00000014430)	ENSXMAG00000026336	ddx21 (ENSXMAG00000008199) #15	ENSXMAG00000014479	mpc1 (ENSXMAG00000023209)	rrp15 (ENSXMAG00000020298)	kifbp (ENSXMAG00000014516) #16	vps26a (ENSXMAG00000014529) #18	supv3l1 (ENSXMAG00000014547) #19	hkdc1 (ENSXMAG00000014561) #21	HK1 (ENSXMAG00000014562) #22	tacr2 (ENSXMAG00000014703) #23	ENSXMAG00000024778	ENSXMAG00000023466	tspan15 (ENSXMAG00000029418) #25	ENSXMAG00000014738 #8	pbld (ENSXMAG00000014754)	ENSXMAG00000014775	ENSXMAG00000028385	rufy2 (ENSXMAG00000014817) #7	fam120b (ENSXMAG00000014864)	dld (ENSXMAG00000014878)	mis12 (ENSXMAG00000014894)	ppm1g (ENSXMAG00000014897)	ENSXMAG00000014920	pdcd2 (ENSXMAG00000014929)
Aplocheiloidei	ANCESTRAL SPECIES	16	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E	ENSGT00550000075035
Mangrove rivulus	MODERN SPECIES	44					ENSKMAG00000020990	rnaset2 (ENSKMAG00000020963)	MYOM2 (ENSKMAG00000020939)	CSMD1 (ENSKMAG00000020853)	ENSKMAG00000020789	ddx21 (ENSKMAG00000020766) #15	mpc1 (ENSKMAG00000020747)	kifbp (ENSKMAG00000020726) #16	vps26a (ENSKMAG00000020693) #18	supv3l1 (ENSKMAG00000020644) #19	hkdc1 (ENSKMAG00000020617) #21	HK1 (ENSKMAG00000020597) #22	tacr2 (ENSKMAG00000020586) #23	tspan15 (ENSKMAG00000020567) #25	DNA2 (ENSKMAG00000020545) #8	pbld (ENSKMAG00000020528)	HNRNPH3 (ENSKMAG00000020517)	rufy2 (ENSKMAG00000020484) #7	fam120b (ENSKMAG00000020459)	dld (ENSKMAG00000020417)	mis12 (ENSKMAG00000020395)	ppm1g (ENSKMAG00000020379)	ENSKMAG00000020368	pdcd2 (ENSKMAG00000020350)	tbp (ENSKMAG00000020335)	psmc3 (ENSKMAG00000020322)	psmb1 (ENSKMAG00000020306)
Oryzias	ANCESTRAL SPECIES	13	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000165719	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Oryzias_b	ANCESTRAL SPECIES	5	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E	ENSGT00550000075035
Indian medaka	MODERN SPECIES	26	elp4 (ENSOMEG00000004065)	immp1l (ENSOMEG00000004086)	ENSOMEG00000004177	rnaset2 (ENSOMEG00000004209)	ENSOMEG00000004277	CSMD1 (ENSOMEG00000004461)	ENSOMEG00000004501	ddx21 (ENSOMEG00000004523) #15	ENSOMEG00000004539	mpc1 (ENSOMEG00000004608)	kifbp (ENSOMEG00000004639) #16	ENSOMEG00000004662	vps26a (ENSOMEG00000004688) #18	supv3l1 (ENSOMEG00000004719) #19	hkdc1 (ENSOMEG00000004753) #21	HK1 (ENSOMEG00000004849) #22	tacr2 (ENSOMEG00000004871) #23	tspan15 (ENSOMEG00000004886) #25	ENSOMEG00000004905	ENSOMEG00000004914	ENSOMEG00000004956 #8	pbld (ENSOMEG00000004978)	HNRNPH3 (ENSOMEG00000005017)	rufy2 (ENSOMEG00000005085) #7	ENSOMEG00000005161	dld (ENSOMEG00000005200)	mis12 (ENSOMEG00000005209)	ppm1g (ENSOMEG00000000114)	ENSOMEG00000005270	pdcd2 (ENSOMEG00000005291)	tbp (ENSOMEG00000005395)
Javanese ricefish	MODERN SPECIES	17	pax6b (ENSOJAG00000012869)	elp4 (ENSOJAG00000013244)	immp1l (ENSOJAG00000013264)	ENSOJAG00000013629	rnaset2 (ENSOJAG00000017762)	ENSOJAG00000017875	CSMD1 (ENSOJAG00000019928)	ENSOJAG00000021726	DDX50 (ENSOJAG00000021738) #14	ENSOJAG00000021749	mpc1 (ENSOJAG00000021768)	kifbp (ENSOJAG00000021785) #16	ENSOJAG00000021804	vps26a (ENSOJAG00000021829) #18	supv3l1 (ENSOJAG00000021909) #19	HK1 (ENSOJAG00000022059) #22	tacr2 (ENSOJAG00000022121) #23	tspan15 (ENSOJAG00000022156) #25	ENSOJAG00000022182 #8	pbld (ENSOJAG00000022207)	HNRNPH3 (ENSOJAG00000022249)	rufy2 (ENSOJAG00000022327) #7	ENSOJAG00000022431	dld (ENSOJAG00000022434)	mis12 (ENSOJAG00000022469)	ppm1g (ENSOJAG00000022476)	ENSOJAG00000022501	pdcd2 (ENSOJAG00000022503)	tbp (ENSOJAG00000022509)	psmc3 (ENSOJAG00000022536)	psmb1 (ENSOJAG00000022544)
Oryzias_a	ANCESTRAL SPECIES	6	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E	ENSGT00550000075035
Chinese medaka	MODERN SPECIES	92						ENSOSIG00000015514	csmd1a (ENSOSIG00000015511)	ENSOSIG00000015502	ddx21 (ENSOSIG00000015491) #15	gbgt1l5 (ENSOSIG00000015488)	mpc1 (ENSOSIG00000015487)	kifbp (ENSOSIG00000015304) #16	ENSOSIG00000015294	vps26a (ENSOSIG00000014992) #18	supv3l1 (ENSOSIG00000014934) #19	HK1 (ENSOSIG00000011348) #22	tacr2 (ENSOSIG00000011310) #23	tspan15 (ENSOSIG00000011309) #25	ENSOSIG00000011307	pbld (ENSOSIG00000011262)	HNRNPH3 (ENSOSIG00000011227)	rufy2 (ENSOSIG00000011144) #7	fam120b (ENSOSIG00000011134)	dld (ENSOSIG00000010751)	mis12 (ENSOSIG00000010748)	ppm1g (ENSOSIG00000010731)	ENSOSIG00000010728	pdcd2 (ENSOSIG00000010726)	tbp (ENSOSIG00000010720)	psmc3 (ENSOSIG00000010710)	psmb1 (ENSOSIG00000010706)
Japanese Medaka HdrR	MODERN SPECIES	17	elp4 (ENSORLG00000009918)	ENSORLG00000027973	immp1l (ENSORLG00000009928)	ENSORLG00000009979	rnaset2 (ENSORLG00000029310)	ENSORLG00000010005	CSMD1 (ENSORLG00000010058)	ENSORLG00000025681	ddx21 (ENSORLG00000010122) #15	ENSORLG00000010140	mpc1 (ENSORLG00000010164)	kifbp (ENSORLG00000010186) #16	vps26a (ENSORLG00000010208) #18	supv3l1 (ENSORLG00000010240) #19	hkdc1 (ENSORLG00000010258) #21	HK1 (ENSORLG00000010420) #22	tacr2 (ENSORLG00000010439) #23	tspan15 (ENSORLG00000010453) #25	ENSORLG00000026130	ENSORLG00000022710	ENSORLG00000010460	pbld (ENSORLG00000010481)	HNRNPH3 (ENSORLG00000010499)	rufy2 (ENSORLG00000010550) #7	fam120b (ENSORLG00000010574)	ENSORLG00000010606	mis12 (ENSORLG00000010625)	ppm1g (ENSORLG00000010662)	ENSORLG00000010688	pdcd2 (ENSORLG00000010717)	tbp (ENSORLG00000010757)
Ovalentaria_B	ANCESTRAL SPECIES	10	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Cichlidae	ANCESTRAL SPECIES	11	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Pseudocrenilabrinae	ANCESTRAL SPECIES	13	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595.t.a	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Pseudocrenilabrinae_A	ANCESTRAL SPECIES	13	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595.t.a	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Haplochromini	ANCESTRAL SPECIES	11	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT01100000263553.a.a.a.d.f	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595.t.a	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Burton s mouthbrooder	MODERN SPECIES	278	elp4 (ENSHBUG00000016935)	immp1l (ENSHBUG00000016960)	ENSHBUG00000017069	rnaset2 (ENSHBUG00000000503)	ENSHBUG00000017099	CSMD1 (ENSHBUG00000017516)	ENSHBUG00000017627	ddx21 (ENSHBUG00000017638) #15	mpc1 (ENSHBUG00000017645)	kifbp (ENSHBUG00000017664) #16	ENSHBUG00000017685	vps26a (ENSHBUG00000017715) #18	ENSHBUG00000017720	supv3l1 (ENSHBUG00000017736) #19	hkdc1 (ENSHBUG00000017819) #21	HK1 (ENSHBUG00000017877) #22	tacr2 (ENSHBUG00000017895) #23	tspan15 (ENSHBUG00000017918) #25	ENSHBUG00000017924	ENSHBUG00000017932	PBLD (ENSHBUG00000017945)	HNRNPH3 (ENSHBUG00000018007)	rufy2 (ENSHBUG00000018047) #7	ENSHBUG00000018058	fam120b (ENSHBUG00000018077)	dld (ENSHBUG00000018137)	mis12 (ENSHBUG00000018146)	ppm1g (ENSHBUG00000018156)	ENSHBUG00000018173	pdcd2 (ENSHBUG00000018191)	tbp (ENSHBUG00000018252)
Haplochromini_A	ANCESTRAL SPECIES	10	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT01100000263553.a.a.a.d.f	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595.t.a	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Haplochromini_B	ANCESTRAL SPECIES	3	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT01100000263553.a.a.a.d.f	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595.t.a	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Zebra mbuna	MODERN SPECIES	1091	pax6b (ENSMZEG00005011922)	elp4 (ENSMZEG00005011879)	immp1l (ENSMZEG00005011865)	ENSMZEG00005011843	rnaset2 (ENSMZEG00005011825)	ENSMZEG00005011796	CSMD1 (ENSMZEG00005011703)	ENSMZEG00005011629	ddx21 (ENSMZEG00005011618) #15	mpc1 (ENSMZEG00005011609)	kifbp (ENSMZEG00005011605) #16	ENSMZEG00005011597	vps26a (ENSMZEG00005011581) #18	supv3l1 (ENSMZEG00005011568) #19	hkdc1 (ENSMZEG00005011532) #21	HK1 (ENSMZEG00005011481) #22	tacr2 (ENSMZEG00005011458) #23	tspan15 (ENSMZEG00005011444) #25	ENSMZEG00005011431	ENSMZEG00005011410	PBLD (ENSMZEG00005011397)	HNRNPH3 (ENSMZEG00005011374)	rufy2 (ENSMZEG00005011330) #7	ENSMZEG00005011313	fam120b (ENSMZEG00005011236)	dld (ENSMZEG00005011205)	mis12 (ENSMZEG00005011198)	ppm1g (ENSMZEG00005011190)	ENSMZEG00005011180	pdcd2 (ENSMZEG00005011164)	tbp (ENSMZEG00005011155)
Eastern happy	MODERN SPECIES		elp4 (ENSACLG00000008037)	immp1l (ENSACLG00000008043)	ENSACLG00000008055	rnaset2 (ENSACLG00000008102)	MYOM2 (ENSACLG00000008114)	CSMD1 (ENSACLG00000008146)	ENSACLG00000008228	ddx21 (ENSACLG00000008248) #15	mpc1 (ENSACLG00000008261)	kifbp (ENSACLG00000008269) #16	ENSACLG00000008278	vps26a (ENSACLG00000008286) #18	ENSACLG00000008296	supv3l1 (ENSACLG00000008303) #19	hkdc1 (ENSACLG00000008310) #21	HK1 (ENSACLG00000008330) #22	tacr2 (ENSACLG00000008350) #23	tspan15 (ENSACLG00000008360) #25	ENSACLG00000008374	ENSACLG00000008378	PBLD (ENSACLG00000008437)	HNRNPH3 (ENSACLG00000008447)	rufy2 (ENSACLG00000008463) #7	ENSACLG00000008535	fam120b (ENSACLG00000008543)	dld (ENSACLG00000008971)	mis12 (ENSACLG00000009000)	ppm1g (ENSACLG00000009004)	ENSACLG00000009012	pdcd2 (ENSACLG00000009018)	tbp (ENSACLG00000009034)
P. nyererei	MODERN SPECIES	346								ENSPNYG00000015498	ddx21 (ENSPNYG00000015566) #15	mpc1 (ENSPNYG00000015602)	kifbp (ENSPNYG00000015782) #16	ENSPNYG00000015860	vps26a (ENSPNYG00000015871) #18	supv3l1 (ENSPNYG00000015894) #19	hkdc1 (ENSPNYG00000015912) #21	HK1 (ENSPNYG00000015961) #22	tacr2 (ENSPNYG00000016035) #23	tspan15 (ENSPNYG00000016137) #25	ENSPNYG00000016157	ENSPNYG00000016179	PBLD (ENSPNYG00000016348)	HNRNPH3 (ENSPNYG00000016363)	rufy2 (ENSPNYG00000016425) #7	ENSPNYG00000016479	fam120b (ENSPNYG00000016488)	dld (ENSPNYG00000016506)	mis12 (ENSPNYG00000016535)	ppm1g (ENSPNYG00000016549)	ENSPNYG00000016599	pdcd2 (ENSPNYG00000016621)	tbp (ENSPNYG00000016659)
Lyretail cichlid	MODERN SPECIES	290	elp4 (ENSNBRG00000006907)	immp1l (ENSNBRG00000006896)	ENSNBRG00000006841	rnaset2 (ENSNBRG00000006817)	MYOM2 (ENSNBRG00000006590)	CSMD1 (ENSNBRG00000006349)	ENSNBRG00000006320	ENSNBRG00000006220	ddx21 (ENSNBRG00000006198) #15	mpc1 (ENSNBRG00000006186)	kifbp (ENSNBRG00000006176) #16	ENSNBRG00000006160	vps26a (ENSNBRG00000006124) #18	supv3l1 (ENSNBRG00000006022) #19	hkdc1 (ENSNBRG00000005193) #21	HK1 (ENSNBRG00000005045) #22	tacr2 (ENSNBRG00000004869) #23	tspan15 (ENSNBRG00000004806) #25	ENSNBRG00000004792	ENSNBRG00000004651 #8	PBLD (ENSNBRG00000004428)	HNRNPH3 (ENSNBRG00000004383)	rufy2 (ENSNBRG00000004337) #7	ENSNBRG00000004316	ENSNBRG00000004297	fam120b (ENSNBRG00000004275)	dld (ENSNBRG00000004234)	mis12 (ENSNBRG00000004224)	ppm1g (ENSNBRG00000004191)	ENSNBRG00000004181	pdcd2 (ENSNBRG00000004176)
Midas cichlid	MODERN SPECIES	313	RCN1 (ENSACIG00000005714)	pax6b (ENSACIG00000005867)	elp4 (ENSACIG00000005887)	immp1l (ENSACIG00000005907)	ENSACIG00000005924	MYOM2 (ENSACIG00000005981)	CSMD1 (ENSACIG00000006166)	ENSACIG00000006339	ddx21 (ENSACIG00000006429) #15	mpc1 (ENSACIG00000006477)	kifbp (ENSACIG00000006652) #16	ENSACIG00000006728	vps26a (ENSACIG00000006733) #18	supv3l1 (ENSACIG00000006824) #19	hkdc1 (ENSACIG00000006866) #21	HK1 (ENSACIG00000006924) #22	tacr2 (ENSACIG00000006986) #23	tspan15 (ENSACIG00000007015) #25	ENSACIG00000007096	DNA2 (ENSACIG00000007116) #8	pbld (ENSACIG00000007220)	HNRNPH3 (ENSACIG00000007244)	rufy2 (ENSACIG00000007290) #7	fam120b (ENSACIG00000007339)	dld (ENSACIG00000007386)	mis12 (ENSACIG00000007418)	ppm1g (ENSACIG00000007440)	ENSACIG00000007468	pdcd2 (ENSACIG00000007488)	tbp (ENSACIG00000007577)	psmc3 (ENSACIG00000007653)
Pomacentridae	ANCESTRAL SPECIES	49	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Pomacentridae_A	ANCESTRAL SPECIES	47	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Amphiprion	ANCESTRAL SPECIES	39	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b.k	ENSGT00950000182858.A.b.b.g.b.l	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Clown anemonefish	MODERN SPECIES	1551		ENSAOCG00000023559	rnaset2 (ENSAOCG00000023510)	MYOM2 (ENSAOCG00000023464)	CSMD1 (ENSAOCG00000001685)	ENSAOCG00000023261	ddx21 (ENSAOCG00000023174) #15	ENSAOCG00000023150	ENSAOCG00000023115	mpc1 (ENSAOCG00000023078)	kifbp (ENSAOCG00000001870) #16	ENSAOCG00000022948	vps26a (ENSAOCG00000022938) #18	supv3l1 (ENSAOCG00000022898) #19	hkdc1 (ENSAOCG00000001651) #21	HK1 (ENSAOCG00000022848) #22	tacr2 (ENSAOCG00000022739) #23	tspan15 (ENSAOCG00000022556) #25	ENSAOCG00000022529	ENSAOCG00000022522	pbld (ENSAOCG00000022473)
Orange clownfish	MODERN SPECIES		MYOM2 (ENSAPEG00000007506)	ENSAPEG00000007469	CSMD1 (ENSAPEG00000007239)	ENSAPEG00000007124	ddx21 (ENSAPEG00000007108) #15	ENSAPEG00000007086	ENSAPEG00000007013	ENSAPEG00000006943	ENSAPEG00000006909	mpc1 (ENSAPEG00000006888)	kifbp (ENSAPEG00000006873) #16	ENSAPEG00000006859	vps26a (ENSAPEG00000006831) #18	supv3l1 (ENSAPEG00000006805) #19	hkdc1 (ENSAPEG00000006735) #21	HK1 (ENSAPEG00000006645) #22	tacr2 (ENSAPEG00000006619) #23	tspan15 (ENSAPEG00000006593) #25	ENSAPEG00000006572	ENSAPEG00000006287	pbld (ENSAPEG00000006220)	ENSAPEG00000006201	rufy2 (ENSAPEG00000006144) #7	rufy2 (ENSAPEG00000006101) #7	fam120b (ENSAPEG00000006083)	dld (ENSAPEG00000006042)	mis12 (ENSAPEG00000006035)	ppm1g (ENSAPEG00000006020)	pdcd2 (ENSAPEG00000005912)	tbp (ENSAPEG00000005854)	psmc3 (ENSAPEG00000005839)
Spiny chromis	MODERN SPECIES	1274								ddx21 (ENSAPOG00000012269) #15	ENSAPOG00000012253	mpc1 (ENSAPOG00000012156)	kifbp (ENSAPOG00000012142) #16	ENSAPOG00000012118	vps26a (ENSAPOG00000012076) #18	supv3l1 (ENSAPOG00000012040) #19	hkdc1 (ENSAPOG00000012012) #21	HK1 (ENSAPOG00000011939) #22	tacr2 (ENSAPOG00000011915) #23	tspan15 (ENSAPOG00000011886) #25
Bicolor damselfish	MODERN SPECIES	2095															hkdc1 (ENSSPAG00000014087) #21	HK1 (ENSSPAG00000014615) #22	tacr2 (ENSSPAG00000014701) #23	tspan15 (ENSSPAG00000015070) #25
Percomorphaceae_C	ANCESTRAL SPECIES	11	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Percomorphaceae_D	ANCESTRAL SPECIES	11	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Carangaria	ANCESTRAL SPECIES	11	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Carangaria_A	ANCESTRAL SPECIES	20	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Seriola	ANCESTRAL SPECIES	13	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E.h
Yellowtail amberjack	MODERN SPECIES	3246	immp1l (ENSSLDG00000025658)	ENSSLDG00000025659	rnaset2 (ENSSLDG00000025660)	MYOM2 (ENSSLDG00000025661)	CSMD1 (ENSSLDG00000025662)	ENSSLDG00000025663	ENSSLDG00000025664	ddx21 (ENSSLDG00000025665) #15	ENSSLDG00000025666	mpc1 (ENSSLDG00000025667)	kifbp (ENSSLDG00000025668) #16	ENSSLDG00000025669	vps26a (ENSSLDG00000025670) #18	supv3l1 (ENSSLDG00000025671) #19	hkdc1 (ENSSLDG00000025672) #21	HK1 (ENSSLDG00000025673) #22	tacr2 (ENSSLDG00000025674) #23	tspan15 (ENSSLDG00000025675) #25	ENSSLDG00000025676	ENSSLDG00000025677	pbld (ENSSLDG00000025678)	HNRNPH3 (ENSSLDG00000025679)	rufy2 (ENSSLDG00000025680) #7
Greater amberjack	MODERN SPECIES	1	elp4 (ENSSDUG00000020753)	immp1l (ENSSDUG00000020771)	ENSSDUG00000020786	rnaset2 (ENSSDUG00000020833)	MYOM2 (ENSSDUG00000020883)	CSMD1 (ENSSDUG00000021170)	ENSSDUG00000021379	ddx21 (ENSSDUG00000021420) #15	ENSSDUG00000021443	mpc1 (ENSSDUG00000021513)	kifbp (ENSSDUG00000021573) #16	ENSSDUG00000021579	vps26a (ENSSDUG00000021583) #18	supv3l1 (ENSSDUG00000021594) #19	hkdc1 (ENSSDUG00000021637) #21	HK1 (ENSSDUG00000021982) #22	tacr2 (ENSSDUG00000022010) #23	tspan15 (ENSSDUG00000022014) #25	ENSSDUG00000022035	ENSSDUG00000000091	pbld (ENSSDUG00000000119)	HNRNPH3 (ENSSDUG00000000160)	rufy2 (ENSSDUG00000000180) #7	ENSSDUG00000000292	dld (ENSSDUG00000000322)	mis12 (ENSSDUG00000000367)	ppm1g (ENSSDUG00000000400)	ENSSDUG00000000461	pdcd2 (ENSSDUG00000000477)	tbp (ENSSDUG00000000570)	psmc3 (ENSSDUG00000000603)
Pleuronectoidei	ANCESTRAL SPECIES	10	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Tongue sole	MODERN SPECIES	15	UACA (ENSCSEG00000012989)	TLE3 (ENSCSEG00000013018)	CSMD1 (ENSCSEG00000013080)	ENSCSEG00000013156	rnaset2 (ENSCSEG00000013249)	ENSCSEG00000013268	ENSCSEG00000013929	ENSCSEG00000013937	ddx21 (ENSCSEG00000013939) #15	mpc1 (ENSCSEG00000013953)	kifbp (ENSCSEG00000014017) #16	ENSCSEG00000014023	vps26a (ENSCSEG00000014043) #18	supv3l1 (ENSCSEG00000014061) #19	hkdc1 (ENSCSEG00000014091) #21	HK1 (ENSCSEG00000014119) #22	tacr2 (ENSCSEG00000014151) #23	tspan15 (ENSCSEG00000014162) #25	ENSCSEG00000014177	pbld (ENSCSEG00000014200)	HNRNPH3 (ENSCSEG00000014207)	KIAA1549L (ENSCSEG00000014217)	hipk3b (ENSCSEG00000014238)	cstf3 (ENSCSEG00000014283)	depdc7a (ENSCSEG00000014319)	QSER1 (ENSCSEG00000014329)	prrg4 (ENSCSEG00000014352)	eif3m (ENSCSEG00000014358)	wt1b (ENSCSEG00000014378)	RCN1 (ENSCSEG00000014384)	pax6b (ENSCSEG00000014397)
Turbot	MODERN SPECIES	17	elp4 (ENSSMAG00000002597)	immp1l (ENSSMAG00000002620)	ENSSMAG00000002729	ENSSMAG00000003316	ENSSMAG00000003332	ENSSMAG00000003491	ENSSMAG00000021457	ENSSMAG00000003796	ENSSMAG00000003932 #15	ENSSMAG00000035401	kifbp (ENSSMAG00000003974) #16	ENSSMAG00000003993	vps26a (ENSSMAG00000004002) #18	supv3l1 (ENSSMAG00000004035) #19	hkdc1 (ENSSMAG00000004095) #21	HK1 (ENSSMAG00000004152) #22	tacr2 (ENSSMAG00000004276) #23	tspan15 (ENSSMAG00000004369) #25	ENSSMAG00000004445	pbld (ENSSMAG00000004464)	ENSSMAG00000004504	rufy2 (ENSSMAG00000004531) #7	ENSSMAG00000022796	ENSSMAG00000004628	ENSSMAG00000004701	ENSSMAG00000028671	ENSSMAG00000004731	ENSSMAG00000004749	ENSSMAG00000004807	ENSSMAG00000004822	ENSSMAG00000004835
Anabantaria	ANCESTRAL SPECIES	11	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000165719	ENSGT00780000122010 #8	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Anabantoidei	ANCESTRAL SPECIES	8	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000165719	ENSGT00390000017595.o	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Climbing perch	MODERN SPECIES	16	ENSATEG00000022422	rnaset2 (ENSATEG00000022393)	ENSATEG00000022345	ENSATEG00000022268	csmd1a (ENSATEG00000026451)	ENSATEG00000022212	ENSATEG00000022194 #15	ENSATEG00000021858	ENSATEG00000021746	ENSATEG00000021741	ENSATEG00000021731	kifbp (ENSATEG00000021720) #16	ENSATEG00000027333	vps26a (ENSATEG00000026144) #18	supv3l1 (ENSATEG00000021682) #19	HK1 (ENSATEG00000021635) #22	tacr2 (ENSATEG00000021622) #23	tspan15 (ENSATEG00000021610) #25	ENSATEG00000021602	ENSATEG00000021464 #8	PBLD (ENSATEG00000021380)	ENSATEG00000021358	PBLD (ENSATEG00000021259)	ENSATEG00000021208	rufy2 (ENSATEG00000021165) #7	ENSATEG00000021157	ENSATEG00000021144	ENSATEG00000021120	ENSATEG00000021112	ENSATEG00000021067	ENSATEG00000021049
Siamese fighting fish	MODERN SPECIES	14	pax6b (ENSBSLG00000020851)	elp4 (ENSBSLG00000020842)	immp1l (ENSBSLG00000020840)	ENSBSLG00000020464	ENSBSLG00000019380	rnaset2 (ENSBSLG00000019341)	CSMD1 (ENSBSLG00000016512)	ENSBSLG00000016452	ddx21 (ENSBSLG00000016332) #15	ENSBSLG00000016311	mpc1 (ENSBSLG00000016304)	kifbp (ENSBSLG00000016264) #16	ENSBSLG00000016257	vps26a (ENSBSLG00000016217) #18	supv3l1 (ENSBSLG00000016169) #19	HK1 (ENSBSLG00000016009) #22	tacr2 (ENSBSLG00000015991) #23	tspan15 (ENSBSLG00000015980) #25	ENSBSLG00000015910	ENSBSLG00000015897	PBLD (ENSBSLG00000015828)	ENSBSLG00000015794	rufy2 (ENSBSLG00000015421) #7	ENSBSLG00000015345	fam120b (ENSBSLG00000015294)	dld (ENSBSLG00000015187)	mis12 (ENSBSLG00000015072)	ppm1g (ENSBSLG00000015055)	ENSBSLG00000015050	pdcd2 (ENSBSLG00000015045)	tbp (ENSBSLG00000015037)
Zig-zag eel	MODERN SPECIES	17	ABCB10 (ENSMAMG00000020353)	ACTA1 (ENSMAMG00000020342)	ccsapb (ENSMAMG00000020337)	rab4a (ENSMAMG00000020326)	ENSMAMG00000020306	ENSMAMG00000020299	ENSMAMG00000020296	ENSMAMG00000020292	ENSMAMG00000020288	ENSMAMG00000025876	kifbp (ENSMAMG00000020282) #16	ENSMAMG00000020278	ENSMAMG00000026046	vps26a (ENSMAMG00000020272) #18	supv3l1 (ENSMAMG00000020254) #19	HK1 (ENSMAMG00000020239) #22	tacr2 (ENSMAMG00000020226) #23	tspan15 (ENSMAMG00000020213) #25	ENSMAMG00000020196 #8	pbld (ENSMAMG00000020177)	ENSMAMG00000020155	rufy2 (ENSMAMG00000020120) #7	ENSMAMG00000019726	ENSMAMG00000019707	ENSMAMG00000024952	ENSMAMG00000019694	ENSMAMG00000019683 #15	ENSMAMG00000019635	ENSMAMG00000020260	ENSMAMG00000024537	ENSMAMG00000020321
Eupercaria	ANCESTRAL SPECIES	14	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Tetraodontidae	ANCESTRAL SPECIES	4	ENSGT00940000156734.b	ENSGT01010000222360.D.b	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f.e	ENSGT00940000155701.D	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Tetraodon	MODERN SPECIES	20	eif3m (ENSTNIG00000013807)	wt1b (ENSTNIG00000013806)	RCN1 (ENSTNIG00000013805)	pax6b (ENSTNIG00000013804)	elp4 (ENSTNIG00000013803)	ENSTNIG00000013802	rnaset2 (ENSTNIG00000013801)	MYOM2 (ENSTNIG00000013800)	CSMD1 (ENSTNIG00000013799)	ddx21 (ENSTNIG00000013798) #15	mpc1 (ENSTNIG00000013797)	kifbp (ENSTNIG00000013796) #16	vps26a (ENSTNIG00000013795) #18	supv3l1 (ENSTNIG00000013794) #19	hkdc1 (ENSTNIG00000013793) #21	HK1 (ENSTNIG00000013792) #22	tacr2 (ENSTNIG00000013791) #23	tspan15 (ENSTNIG00000013790) #25	ENSTNIG00000013789	HNRNPH3 (ENSTNIG00000013788)	rufy2 (ENSTNIG00000013787) #7	ENSTNIG00000013786	ENSTNIG00000005821	dld (ENSTNIG00000005347)	mis12 (ENSTNIG00000003973)	ppm1g (ENSTNIG00000003972)	ENSTNIG00000017679	pdcd2 (ENSTNIG00000017680)	tbp (ENSTNIG00000017681)	psmc3 (ENSTNIG00000017682)	psmb1 (ENSTNIG00000017683)
Eupecaria_A	ANCESTRAL SPECIES	15	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Ballan wrasse	MODERN SPECIES		ENSLBEG00000009651	ENSLBEG00000009618	ENSLBEG00000009576	UNC13C (ENSLBEG00000009478)	ENSLBEG00000009445	onecut1 (ENSLBEG00000009427)	atosa (ENSLBEG00000009414)	ENSLBEG00000009392	MYO5A (ENSLBEG00000009284)	gnb5b (ENSLBEG00000009225)	ENSLBEG00000009201	ENSLBEG00000009179	vps26a (ENSLBEG00000009126) #18	supv3l1 (ENSLBEG00000009091) #19	hkdc1 (ENSLBEG00000009049) #21	HK1 (ENSLBEG00000008960) #22	tacr2 (ENSLBEG00000008913) #23	tspan15 (ENSLBEG00000008882) #25	ENSLBEG00000008850	ENSLBEG00000008812	PBLD (ENSLBEG00000008766)	HNRNPH3 (ENSLBEG00000008709)	rufy2 (ENSLBEG00000008625) #7	ENSLBEG00000008583	fam120b (ENSLBEG00000008513)	dld (ENSLBEG00000008425)	mis12 (ENSLBEG00000008378)	ppm1g (ENSLBEG00000008252)	foxf1 (ENSLBEG00000008223)	mthfsd (ENSLBEG00000008132)	DBNDD1 (ENSLBEG00000008080)
Eupecaria_B	ANCESTRAL SPECIES	15	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Eupecaria_C	ANCESTRAL SPECIES	11	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Eupercaria_incertae_sedis	ANCESTRAL SPECIES	7	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
European seabass	MODERN SPECIES	18	ENSDLAG00005012545	ENSDLAG00005031897	ENSDLAG00005012143	ENSDLAG00005010694	ENSDLAG00005012130	ENSDLAG00005027401	ENSDLAG00005010490	ENSDLAG00005010054 #15	ENSDLAG00005009906	ENSDLAG00005030424	kifbp (ENSDLAG00005009813) #16	ENSDLAG00005009799	vps26a (ENSDLAG00005033936) #18	supv3l1 (ENSDLAG00005009565) #19	hkdc1 (ENSDLAG00005008915) #21	HK1 (ENSDLAG00005031851) #22	tacr2 (ENSDLAG00005008827) #23	tspan15 (ENSDLAG00005008807) #25	ENSDLAG00005026646	ENSDLAG00005008801	ENSDLAG00005008774	pbld (ENSDLAG00005028188)	ENSDLAG00005008733	rufy2 (ENSDLAG00005007731) #7	ENSDLAG00005032150	ENSDLAG00005007675	ENSDLAG00005007637	ENSDLAG00005007631	ENSDLAG00005007607	ENSDLAG00005007599	ENSDLAG00005007593
Perciformes	ANCESTRAL SPECIES	15	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Cottioidei	ANCESTRAL SPECIES	13	ENSGT00940000155391.a.b.b	ENSGT00390000001443	ENSGT00550000075025	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00650000094290	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474
Lumpfish	MODERN SPECIES	18	MYOM2 (ENSCLMG00005004158)	ENSCLMG00005004259	ENSCLMG00005004287	ENSCLMG00005004304	ENSCLMG00005004332	csmd1a (ENSCLMG00005004362)	ENSCLMG00005004421	ddx21 (ENSCLMG00005004553) #15	mpc1 (ENSCLMG00005004669)	kifbp (ENSCLMG00005004697) #16	ENSCLMG00005004776	vps26a (ENSCLMG00005004790) #18	supv3l1 (ENSCLMG00005005200) #19	ENSCLMG00005005633 #21	ENSCLMG00005005634 #21	HK1 (ENSCLMG00005005713) #22	tacr2 (ENSCLMG00005013966) #23	tspan15 (ENSCLMG00005013973) #25	ENSCLMG00005013975	ENSCLMG00005013979	pbld (ENSCLMG00005014740)	HNRNPH3 (ENSCLMG00005014742)	rufy2 (ENSCLMG00005014749) #7	ENSCLMG00005014903	fam120b (ENSCLMG00005014907)	dld (ENSCLMG00005014925)	mis12 (ENSCLMG00005015188)	ENSCLMG00005015189	ppm1g (ENSCLMG00005015192)	pdcd2 (ENSCLMG00005015218)	tbp (ENSCLMG00005015219)
Stickleback	MODERN SPECIES	1	immp1l (ENSGACG00000016034)	ENSGACG00000016035	rnaset2 (ENSGACG00000016041)	ENSGACG00000016045	CSMD1 (ENSGACG00000016050)	ENSGACG00000016059	ddx21 (ENSGACG00000016060) #15	dnai7 (ENSGACG00000016061)	ENSGACG00000016064	mpc1 (ENSGACG00000016067)	kifbp (ENSGACG00000016068) #16	ENSGACG00000016070	vps26a (ENSGACG00000016072) #18	supv3l1 (ENSGACG00000016077) #19	hkdc1 (ENSGACG00000016082) #21	HK1 (ENSGACG00000016084) #22	tacr2 (ENSGACG00000016103) #23	tspan15 (ENSGACG00000016105) #25	ENSGACG00000016111	HNRNPH3 (ENSGACG00000016118)	rufy2 (ENSGACG00000016120) #7	ENSGACG00000016128	fam120b (ENSGACG00000016129)	dld (ENSGACG00000016131)	mis12 (ENSGACG00000016137)	ppm1g (ENSGACG00000016139)	ENSGACG00000016143	pdcd2 (ENSGACG00000016144)	tbp (ENSGACG00000016147)	psmc3 (ENSGACG00000016150)	psmb1 (ENSGACG00000016151)
Perciformes_a	ANCESTRAL SPECIES	13	ENSGT00940000159956	ENSGT00640000091563.a	ENSGT00940000157057.f	ENSGT00940000155701.D	ENSGT00940000166312.b.a	ENSGT00940000164318	ENSGT00530000064569.b	ENSGT00940000155043 #15	ENSGT00950000182858.A.b.b.g.b	ENSGT00510000046988	ENSGT00390000013819 #16	ENSGT00940000176953	ENSGT00950000183064.a.b.b #18	ENSGT00390000003100 #19	ENSGT00950000182787.B #21	ENSGT00950000182787.A.b #22	ENSGT00940000155512.r #23	ENSGT00940000157973 #25	ENSGT01100000263556.a.b.b.b	ENSGT00940000165719	ENSGT00390000017595	ENSGT00940000157720	ENSGT00940000155595 #7	ENSGT00530000063168.b	ENSGT00940000159781.a	ENSGT00390000018665	ENSGT00940000158427	ENSGT00940000156644.f	ENSGT00940000156603	ENSGT00940000157474	ENSGT01020000230346.E
Pike perch	MODERN SPECIES	29	ENSSLUG00000013816	rnaset2 (ENSSLUG00000014335)	MYOM2 (ENSSLUG00000014461)	ENSSLUG00000016621	ENSSLUG00000016633	csmd1a (ENSSLUG00000016638)	ENSSLUG00000016642	ddx21 (ENSSLUG00000016681) #15	gbgt1l5 (ENSSLUG00000017471)	mpc1 (ENSSLUG00000017492)	kifbp (ENSSLUG00000017511) #16	ENSSLUG00000017526	vps26a (ENSSLUG00000017543) #18	supv3l1 (ENSSLUG00000017668) #19	ENSSLUG00000017739 ##22	HK1 (ENSSLUG00000017780) #22	tacr2 (ENSSLUG00000018343) #23	tspan15 (ENSSLUG00000018376) #25	ENSSLUG00000018378	ENSSLUG00000018392	pbld (ENSSLUG00000018464)	HNRNPH3 (ENSSLUG00000005300)	rufy2 (ENSSLUG00000005401) #7	ENSSLUG00000005635	dld (ENSSLUG00000005677)	mis12 (ENSSLUG00000006129)	ppm1g (ENSSLUG00000006151)	ENSSLUG00000006241	pdcd2 (ENSSLUG00000006251)	tbp (ENSSLUG00000006261)	psmc3 (ENSSLUG00000006295)
Reedfish	MODERN SPECIES	10	ENSECRG00000001771	PIK3AP1 (ENSECRG00000001727)	PPP3CB (ENSECRG00000001684)	ANXA7 (ENSECRG00000001645)	SORBS1 (ENSECRG00000001535)	pdlim1 (ENSECRG00000001473)	ENSECRG00000001466	hells (ENSECRG00000001427)	ddx21 (ENSECRG00000001398) #15	ENSECRG00000001374	kifbp (ENSECRG00000001355) #16	ENSECRG00000001337	vps26a (ENSECRG00000001311) #18	supv3l1 (ENSECRG00000001267) #19	hkdc1 (ENSECRG00000000955) #21	hk1 (ENSECRG00000000761) #22	tacr2 (ENSECRG00000000715) #23	tspan15 (ENSECRG00000000699) #25	rufy2 (ENSECRG00000000679) #7	ENSECRG00000000634	pbld (ENSECRG00000000603)	DNA2 (ENSECRG00000000579) #8	stox1 (ENSECRG00000008343) #12	ccar1 (ENSECRG00000008235) #11	zgc:110319 (ENSECRG00000008183)	si:dkey-228d14.5 (ENSECRG00000008170)	eif4e1c (ENSECRG00000008157)	ENSECRG00000008137 #10	slc25a16 (ENSECRG00000008124) #9	alox5b.2 (ENSECRG00000008107)	marchf8 (ENSECRG00000008078)
Yeast	MODERN SPECIES	12	CNA1 (YLR433C)	YLR434C	TSR2 (YLR435W)	ECM30 (YLR436C)	DIF1 (YLR437C)	YLR437C-A	CAR2 (YLR438W)	LSM3 (YLR438C-A)	MRPL4 (YLR439W)	SEC39 (YLR440C)	RPS1A (YLR441C)	SIR3 (YLR442C)	ECM7 (YLR443W)	YLR444C	GMC2 (YLR445W)	YLR446W #22	VMA6 (YLR447C)	RPL6B (YLR448W)	FPR4 (YLR449W)	HMG2 (YLR450W)	LEU3 (YLR451W)	SST2 (YLR452C)	RIF2 (YLR453C)	FMP27 (YLR454W)	PDP3 (YLR455W)	YLR456W	NBP1 (YLR457C)	YLR458W	GAB1 (YLR459W)	YLR460C	PAU4 (YLR461W)