Bovidae ANCESTRAL SPECIES 20 ENSGT00940000160380 #7 ENSGT00950000182989.A #8 ENSGT00940000157327 #9 ENSGT00940000160977 #10 ENSGT00940000157737 #11 ENSGT00940000159819 #12 ENSGT01030000234534.B.a.b ENSGT01030000234518.B.b #13 ENSGT00940000158999 #14 ENSGT00390000014309.cb ENSGT00940000154617.B #18 ENSGT00940000153289.b.s.b ENSGT00940000159506 #19 ENSGT00940000158389 #20 ENSGT00940000159348 #21 ENSGT00940000155164 #22 ENSGT00530000063335.A #23 ENSGT00940000158943 #24 ENSGT00940000174015.b #25 ENSGT00940000161911 #27 ENSGT00980000199886 ENSGT00940000155024 #28 ENSGT00940000156900 #29 ENSGT00390000018637 #30 ENSGT00390000011359 #31 ENSGT00940000153941.a.a #32 ENSGT01050000244942.a #33 ENSGT00940000159159 #34 ENSGT00940000156178.A #35 ENSGT00390000018488 #36 ENSGT00910000144335 #37 Caprinae ANCESTRAL SPECIES 22 ENSGT00940000155707.bc ENSGT00940000160380 #7 ENSGT00950000182989.A #8 ENSGT00940000157327 #9 ENSGT00940000160977 #10 ENSGT00940000157737 #11 ENSGT00940000159819 #12 ENSGT01030000234518.B.b #13 ENSGT00940000158999 #14 ENSGT00390000014309.cb ENSGT00940000154617.B #18 ENSGT00940000153289.b.t ENSGT00940000159506 #19 ENSGT00940000158389 #20 ENSGT00940000159348 #21 ENSGT00940000155164 #22 ENSGT00530000063335.A #23 ENSGT00940000158943 #24 ENSGT00940000174015.b #25 ENSGT00940000161911 #27 ENSGT00940000155024 #28 ENSGT00940000156900 #29 ENSGT00390000018637 #30 ENSGT00390000011359 #31 ENSGT00940000153941.a.a #32 ENSGT01050000244942.a #33 ENSGT00940000159159 #34 ENSGT00940000156178.A #35 ENSGT00390000018488 #36 ENSGT00910000144335 #37 ENSGT00390000000993 Rambouillet Sheep MODERN SPECIES 9 ENSOARG00020018726 #7 IDH3A (ENSOARG00020018600) #8 CIB2 (ENSOARG00020018425) #9 SH2D7 (ENSOARG00020018375) #10 TBC1D2B (ENSOARG00020018231) #11 ADAMTS7 (ENSOARG00020018031) #12 ENSOARG00020018012 #13 OTUD7A (ENSOARG00020017907) #14 ENSOARG00020017779 #15 ENSOARG00020017757 #16 ENSOARG00020017698 #17 CHRNA7 (ENSOARG00020017406) #18 PCSK6 (ENSOARG00020013445) #19 TM2D3 (ENSOARG00020013167) #20 TARS3 (ENSOARG00020012812) #21 TJP1 (ENSOARG00020012167) #22 ENTREP2 (ENSOARG00020011989) #23 APBA2 (ENSOARG00020011746) #24 ENSOARG00020011702 #25 ENSOARG00020011639 #26 KLF13 (ENSOARG00020011605) #27 TRPM1 (ENSOARG00020010441) #28 MTMR10 (ENSOARG00020010104) #29 ENSOARG00020023889 #30 MPHOSPH10 (ENSOARG00020023868) #31 MCEE (ENSOARG00020023847) #32 TMC3 (ENSOARG00020023774) #33 STARD5 (ENSOARG00020023749) #34 IL16 (ENSOARG00020023691) #35 CFAP161 (ENSOARG00020023620) #36 TLNRD1 (ENSOARG00020023596) #37 Goat MODERN SPECIES 13 IDH3A (ENSCHIG00000014252) #8 CIB2 (ENSCHIG00000023624) #9 SH2D7 (ENSCHIG00000014046) #10 TBC1D2B (ENSCHIG00000016175) #11 ADAMTS7 (ENSCHIG00000009784) #12 OTUD7A (ENSCHIG00000016906) #14 ENSCHIG00000016255 ENSCHIG00000023680 ENSCHIG00000009012 ##15 CHRNA7 (ENSCHIG00000009600) #18 ENSCHIG00000019516 SNRPA1 (ENSCHIG00000016313) PCSK6 (ENSCHIG00000016761) #19 TM2D3 (ENSCHIG00000016740) #20 TARS3 (ENSCHIG00000015264) #21 TJP1 (ENSCHIG00000017162) #22 ENTREP2 (ENSCHIG00000022699) #23 APBA2 (ENSCHIG00000020156) #24 ENSCHIG00000015732 ##26 KLF13 (ENSCHIG00000007281) #27 TRPM1 (ENSCHIG00000008973) #28 MTMR10 (ENSCHIG00000020354) #29 FAN1 (ENSCHIG00000021105) #30 MPHOSPH10 (ENSCHIG00000023646) #31 MCEE (ENSCHIG00000020324) #32 TMC3 (ENSCHIG00000021444) #33 STARD5 (ENSCHIG00000004895) #34 ENSCHIG00000008571 #35 ENSCHIG00000020577 #35 CFAP161 (ENSCHIG00000013714) #36 TLNRD1 (ENSCHIG00000004554) #37 Bovinae ANCESTRAL SPECIES 19 ENSGT00950000182989.A #8 ENSGT00940000157327 #9 ENSGT00940000160977 #10 ENSGT00940000157737 #11 ENSGT00940000159819 #12 ENSGT01030000234534.B.a.b ENSGT01030000234518.B.b #13 ENSGT00940000158999 #14 ENSGT00390000014309.cb ENSGT00940000154617.B #18 ENSGT00940000165655.b ENSGT00940000153289.b.s.a ENSGT00940000159506 #19 ENSGT00940000158389 #20 ENSGT00940000159348 #21 ENSGT00940000155164 #22 ENSGT00530000063335.A #23 ENSGT00940000158943 #24 ENSGT00950000183010.a.a.a.b.a.a.b.a.a ENSGT00940000174015.b #25 ENSGT00940000161911 #27 ENSGT00980000199886 ENSGT00940000155024 #28 ENSGT00940000156900 #29 ENSGT00390000018637 #30 ENSGT00390000011359.b.b #31 ENSGT00940000153941.a.a #32 ENSGT01050000244942.a #33 ENSGT00940000159159 #34 ENSGT00940000156178.A #35 ENSGT00390000018488 #36 Bos ANCESTRAL SPECIES 18 ENSGT00940000157327 #9 ENSGT00940000160977 #10 ENSGT00940000157737 #11 ENSGT00940000159819 #12 ENSGT01030000234534.B.a.b ENSGT01030000234518.B.b #13 ENSGT00940000158999 #14 ENSGT00390000014309.cb ENSGT00940000154617.B #18 ENSGT00940000165655.b ENSGT00940000153289.b.s.a ENSGT00940000159506 #19 ENSGT00940000168934.b ENSGT00940000158389 #20 ENSGT00940000159348 #21 ENSGT00940000155164 #22 ENSGT00530000063335.A #23 ENSGT00940000158943 #24 ENSGT00950000183010.a.a.a.b.a.a.b.a.a ENSGT00940000174015.b #25 ENSGT00940000161911 #27 ENSGT00940000155024 #28 ENSGT00940000156900 #29 ENSGT00390000018637 #30 ENSGT00390000011359.b.b #31 ENSGT00940000153941.a.a #32 ENSGT01050000244942.a #33 ENSGT00940000159159 #34 ENSGT00940000156178.A #35 ENSGT00390000018488 #36 ENSGT00910000144335 #37 Bos_b ANCESTRAL SPECIES 18 ENSGT00950000182989.A #8 ENSGT00940000157327 #9 ENSGT00940000160977 #10 ENSGT00940000157737 #11 ENSGT00940000159819 #12 ENSGT01030000234518.B.b #13 ENSGT00940000158999 #14 ENSGT00390000014309.cb ENSGT00940000154617.B #18 ENSGT00940000165655.b ENSGT00940000153289.b.s.a ENSGT00940000159506 #19 ENSGT00940000168934.b ENSGT00940000158389 #20 ENSGT00940000159348 #21 ENSGT00940000155164 #22 ENSGT00530000063335.A #23 ENSGT00940000158943 #24 ENSGT00950000183010.a.a.a.b.a.a.b.a.a ENSGT00940000174015.b #25 ENSGT00940000161911 #27 ENSGT00940000155024 #28 ENSGT00940000156900 #29 ENSGT00390000018637 #30 ENSGT00390000011359.b.b #31 ENSGT00940000153941.a.a #32 ENSGT01050000244942.a #33 ENSGT00940000159159 #34 ENSGT00940000156178.A #35 ENSGT00390000018488 #36 ENSGT00910000144335 #37 Cow DUPLICATION Cow MODERN SPECIES 13 SH2D7 (ENSBTAG00000047166) #10 TBC1D2B (ENSBTAG00000012022) #11 ADAMTS7 (ENSBTAG00000001396) #12 ENSBTAG00000049380 #13 OTUD7A (ENSBTAG00000006868) #14 ENSBTAG00000048580 ENSBTAG00000053412 CHRNA7 (ENSBTAG00000015775) #18 ENSBTAG00000003957 SNRPA1 (ENSBTAG00000013593) PCSK6 (ENSBTAG00000006675) #19 ENSBTAG00000053962 TM2D3 (ENSBTAG00000007649) #20 TARS3 (ENSBTAG00000007651) #21 ENSBTAG00000049368 #22 TJP1 (ENSBTAG00000015398) #22 ENTREP2 (ENSBTAG00000003435) #23 APBA2 (ENSBTAG00000020413) #24 ENSBTAG00000025764 ENSBTAG00000051487 #25 KLF13 (ENSBTAG00000051090) #27 ENSBTAG00000052208 #28 TRPM1 (ENSBTAG00000001639) #28 MTMR10 (ENSBTAG00000014422) #29 FAN1 (ENSBTAG00000009855) #30 MPHOSPH10 (ENSBTAG00000009854) #31 MCEE (ENSBTAG00000035247) #32 TMC3 (ENSBTAG00000012166) #33 STARD5 (ENSBTAG00000010964) #34 IL16 (ENSBTAG00000010963) #35 ENSBTAG00000049620 #35 Cow MODERN SPECIES 13 CIB2 (ENSBTAG00000010981) #9 SH2D7 (ENSBTAG00000047166) #10 TBC1D2B (ENSBTAG00000012022) #11 ADAMTS7 (ENSBTAG00000001396) #12 ENSBTAG00000049380 #13 OTUD7A (ENSBTAG00000006868) #14 ENSBTAG00000048580 ENSBTAG00000053412 CHRNA7 (ENSBTAG00000015775) #18 ENSBTAG00000003957 SNRPA1 (ENSBTAG00000013593) PCSK6 (ENSBTAG00000006675) #19 ENSBTAG00000053962 TM2D3 (ENSBTAG00000007649) #20 TARS3 (ENSBTAG00000007651) #21 ENSBTAG00000049368 #22 TJP1 (ENSBTAG00000015398) #22 ENTREP2 (ENSBTAG00000003435) #23 APBA2 (ENSBTAG00000020413) #24 ENSBTAG00000025764 ENSBTAG00000051487 #25 KLF13 (ENSBTAG00000051090) #27 ENSBTAG00000052208 #28 TRPM1 (ENSBTAG00000001639) #28 MTMR10 (ENSBTAG00000014422) #29 FAN1 (ENSBTAG00000009855) #30 MPHOSPH10 (ENSBTAG00000009854) #31 MCEE (ENSBTAG00000035247) #32 TMC3 (ENSBTAG00000012166) #33 STARD5 (ENSBTAG00000010964) #34 IL16 (ENSBTAG00000010963) #35 Hybrid Bos Indicus MODERN SPECIES 13 SH2D7 (ENSBIXG00005005386) #10 TBC1D2B (ENSBIXG00005001464) #11 ADAMTS7 (ENSBIXG00005013062) #12 OTUD7A (ENSBIXG00005013135) #14 ENSBIXG00005013161 ENSBIXG00005006338 CHRNA7 (ENSBIXG00005013292) #18 ENSBIXG00005013321 ENSBIXG00005013369 PCSK6 (ENSBIXG00005013674) #19 ENSBIXG00005013742 ENSBIXG00005001693 TM2D3 (ENSBIXG00005013802) #20 TARS3 (ENSBIXG00005013886) #21 ENSBIXG00005001743 TJP1 (ENSBIXG00005014183) #22 ENTREP2 (ENSBIXG00005014257) #23 APBA2 (ENSBIXG00005014334) #24 ENSBIXG00005014392 #25 KLF13 (ENSBIXG00005014412) #27 TRPM1 (ENSBIXG00005014505) #28 MTMR10 (ENSBIXG00005014548) #29 FAN1 (ENSBIXG00005014628) #30 ENSBIXG00005014698 #31 MCEE (ENSBIXG00005002062) #32 TMC3 (ENSBIXG00005014742) #33 STARD5 (ENSBIXG00005014761) #34 IL16 (ENSBIXG00005005585) #35 CFAP161 (ENSBIXG00005014844) #36 TLNRD1 (ENSBIXG00005014868) #37 MESD (ENSBIXG00005014897) Bos_a ANCESTRAL SPECIES 10 ENSGT00940000155707.bc ENSGT00940000160380 #7 ENSGT00950000182989.A #8 ENSGT00940000157327 #9 ENSGT00940000160977 #10 ENSGT00940000157737 #11 ENSGT00940000159819 #12 ENSGT01030000234534.B.a.b ENSGT00940000158999 #14 ENSGT00940000154617.B #18 ENSGT00940000153289.b.s.a ENSGT00940000159506 #19 ENSGT00940000168934.b ENSGT00940000158389 #20 ENSGT00940000159348 #21 ENSGT00940000155164 #22 ENSGT00530000063335.A #23 ENSGT00940000158943 #24 ENSGT00940000174015.b #25 ENSGT00940000161911 #27 ENSGT00940000155024 #28 ENSGT00940000156900 #29 ENSGT00390000018637 #30 ENSGT00390000011359.b.b #31 ENSGT00940000153941.a.a #32 ENSGT01050000244942.a #33 ENSGT00940000159159 #34 ENSGT00940000156178.A #35 ENSGT00390000018488 #36 ENSGT00910000144335 #37 ENSGT00390000000993 Wild yak MODERN SPECIES 328 ENSBMUG00000014123 SNRPA1 (ENSBMUG00000014114) PCSK6 (ENSBMUG00000013846) #19 ENSBMUG00000013653 TM2D3 (ENSBMUG00000013642) #20 TARS3 (ENSBMUG00000013631) #21 TJP1 (ENSBMUG00000013588) #22 ENTREP2 (ENSBMUG00000013480) #23 APBA2 (ENSBMUG00000013458) #24 Domestic yak MODERN SPECIES 8 IDH3A (ENSBGRG00000017674) #8 CIB2 (ENSBGRG00000017178) #9 SH2D7 (ENSBGRG00000017059) #10 TBC1D2B (ENSBGRG00000016776) #11 ADAMTS7 (ENSBGRG00000016622) #12 ENSBGRG00000016593 OTUD7A (ENSBGRG00000016479) #14 CHRNA7 (ENSBGRG00000016143) #18 ENSBGRG00000016093 ENSBGRG00000015903 ENSBGRG00000015736 #19 ENSBGRG00000015565 #19 ENSBGRG00000015509 TM2D3 (ENSBGRG00000015299) #20 TARS3 (ENSBGRG00000014717) #21 TJP1 (ENSBGRG00000012231) #22 ENTREP2 (ENSBGRG00000011993) #23 APBA2 (ENSBGRG00000011196) #24 ENSBGRG00000011097 #25 KLF13 (ENSBGRG00000010998) #27 TRPM1 (ENSBGRG00000009546) #28 MTMR10 (ENSBGRG00000008983) #29 FAN1 (ENSBGRG00000008601) #30 ENSBGRG00000008537 #31 MCEE (ENSBGRG00000008496) #32 ENSBGRG00000008476 TMC3 (ENSBGRG00000008194) #33 STARD5 (ENSBGRG00000008046) #34 ENSBGRG00000007989 #35 ENSBGRG00000007919 #35 ENSBGRG00000007874 #35 American bison MODERN SPECIES 3102 DNAJA4 (ENSBBBG00000010573) ACSBG1 (ENSBBBG00000010591) #7 IDH3A (ENSBBBG00000010606) #8 CIB2 (ENSBBBG00000010616) #9 SH2D7 (ENSBBBG00000001862) #10 TBC1D2B (ENSBBBG00000010632) #11 ADAMTS7 (ENSBBBG00000010780) #12 OTUD7A (ENSBBBG00000010808) #14 ENSBBBG00000010811 CHRNA7 (ENSBBBG00000010844) #18 ENSBBBG00000001903 ENSBBBG00000010864 PCSK6 (ENSBBBG00000010952) #19 TM2D3 (ENSBBBG00000001955) #20 TARS3 (ENSBBBG00000001971) #21 TJP1 (ENSBBBG00000011074) #22 ENTREP2 (ENSBBBG00000011093) #23 APBA2 (ENSBBBG00000011142) #24 ENSBBBG00000011152 ENSBBBG00000011154 #25 ENSBBBG00000011156 #27 ENSBBBG00000007589 TRPM1 (ENSBBBG00000011174) #28 MTMR10 (ENSBBBG00000011191) #29 FAN1 (ENSBBBG00000002035) #30 ENSBBBG00000011224 #31 MCEE (ENSBBBG00000011229) #32 TMC3 (ENSBBBG00000011275) #33 STARD5 (ENSBBBG00000011284) #34 IL16 (ENSBBBG00000011313) #35 CFAP161 (ENSBBBG00000011320) #36